Query 008144
Match_columns 576
No_of_seqs 282 out of 1968
Neff 6.3
Searched_HMMs 46136
Date Thu Mar 28 20:01:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008144.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008144hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02638 cellulose synthase A 100.0 4E-138 9E-143 1175.7 40.0 538 3-551 253-886 (1079)
2 PLN02400 cellulose synthase 100.0 6E-138 1E-142 1174.7 39.9 540 1-551 257-891 (1085)
3 PLN02436 cellulose synthase A 100.0 1E-137 2E-142 1168.4 39.7 539 2-551 267-902 (1094)
4 PLN02915 cellulose synthase A 100.0 2E-137 4E-142 1167.5 40.9 537 4-551 192-850 (1044)
5 PLN02195 cellulose synthase A 100.0 4E-137 9E-142 1159.6 41.2 538 4-552 157-784 (977)
6 PLN02189 cellulose synthase 100.0 4E-137 9E-142 1164.5 41.0 538 3-551 235-848 (1040)
7 PLN02248 cellulose synthase-li 100.0 4E-136 8E-141 1158.3 40.4 555 4-565 267-957 (1135)
8 PLN02190 cellulose synthase-li 100.0 8E-134 2E-138 1113.2 41.0 529 1-551 5-567 (756)
9 PLN02893 Cellulose synthase-li 100.0 1E-131 2E-136 1101.9 45.0 525 2-554 9-557 (734)
10 PF03552 Cellulose_synt: Cellu 100.0 4E-123 9E-128 1025.7 22.4 459 97-562 1-543 (720)
11 TIGR03030 CelA cellulose synth 100.0 1.3E-60 2.8E-65 546.3 42.4 387 19-567 55-450 (713)
12 PRK11498 bcsA cellulose syntha 100.0 5.1E-60 1.1E-64 541.6 42.0 367 19-566 184-560 (852)
13 PRK05454 glucosyltransferase M 100.0 2.6E-39 5.6E-44 366.5 40.2 343 18-523 39-403 (691)
14 PRK14583 hmsR N-glycosyltransf 100.0 4E-38 8.7E-43 343.2 38.1 290 58-523 35-333 (444)
15 COG1215 Glycosyltransferases, 100.0 1.1E-37 2.3E-42 335.9 30.5 234 94-497 53-291 (439)
16 cd04191 Glucan_BSP_ModH Glucan 100.0 1.2E-37 2.7E-42 316.1 26.1 241 97-492 1-253 (254)
17 PRK11204 N-glycosyltransferase 100.0 7E-36 1.5E-40 322.2 35.9 232 91-498 50-287 (420)
18 TIGR03111 glyc2_xrt_Gpos1 puta 100.0 1.2E-35 2.6E-40 323.4 34.3 282 92-549 46-342 (439)
19 PRK14716 bacteriophage N4 adso 100.0 1.7E-32 3.6E-37 301.6 35.9 261 92-519 63-353 (504)
20 cd06437 CESA_CaSu_A2 Cellulose 100.0 1.7E-32 3.6E-37 271.5 22.3 227 95-490 1-232 (232)
21 cd06421 CESA_CelA_like CESA_Ce 100.0 6.9E-32 1.5E-36 265.0 22.4 229 95-494 1-234 (234)
22 PRK11234 nfrB bacteriophage N4 100.0 1.4E-30 3.1E-35 296.9 34.0 240 91-495 59-334 (727)
23 cd06427 CESA_like_2 CESA_like_ 100.0 3.3E-31 7.2E-36 264.5 22.5 229 95-496 1-236 (241)
24 cd06435 CESA_NdvC_like NdvC_li 100.0 2E-30 4.3E-35 256.4 22.9 231 98-497 1-235 (236)
25 PF13641 Glyco_tranf_2_3: Glyc 100.0 1E-30 2.2E-35 256.8 7.3 224 95-489 1-228 (228)
26 TIGR03472 HpnI hopanoid biosyn 100.0 8.2E-28 1.8E-32 256.7 27.0 229 92-492 38-274 (373)
27 cd04190 Chitin_synth_C C-termi 100.0 5.5E-29 1.2E-33 250.2 15.7 172 270-492 64-243 (244)
28 cd02520 Glucosylceramide_synth 100.0 1.4E-27 3E-32 231.2 18.1 193 95-489 1-195 (196)
29 cd04192 GT_2_like_e Subfamily 99.9 1.8E-26 4E-31 225.1 21.9 221 99-489 1-229 (229)
30 PRK15489 nfrB bacteriophage N4 99.9 1.2E-25 2.6E-30 254.1 30.1 268 61-494 35-341 (703)
31 cd06434 GT2_HAS Hyaluronan syn 99.9 7.7E-26 1.7E-30 222.9 20.8 229 96-492 1-234 (235)
32 cd06439 CESA_like_1 CESA_like_ 99.9 8.7E-26 1.9E-30 225.3 20.7 226 89-492 23-250 (251)
33 TIGR03469 HonB hopene-associat 99.9 2.3E-23 4.9E-28 223.4 32.0 231 91-489 36-281 (384)
34 COG2943 MdoH Membrane glycosyl 99.9 2.6E-21 5.7E-26 205.9 32.9 283 94-537 143-436 (736)
35 cd02525 Succinoglycan_BP_ExoA 99.9 1.3E-22 2.9E-27 200.3 21.4 225 96-496 1-233 (249)
36 cd06436 GlcNAc-1-P_transferase 99.9 1.4E-20 3.1E-25 181.9 17.0 167 99-374 1-178 (191)
37 cd06438 EpsO_like EpsO protein 99.8 8.1E-21 1.8E-25 181.6 13.1 163 99-373 1-169 (183)
38 PF13632 Glyco_trans_2_3: Glyc 99.8 5.7E-19 1.2E-23 169.9 17.0 137 286-490 1-143 (193)
39 cd04184 GT2_RfbC_Mx_like Myxoc 99.8 5.2E-19 1.1E-23 170.0 16.4 191 95-463 1-195 (202)
40 cd04195 GT2_AmsE_like GT2_AmsE 99.8 1.2E-18 2.5E-23 167.7 14.9 189 98-462 1-194 (201)
41 cd02510 pp-GalNAc-T pp-GalNAc- 99.8 1.4E-17 3E-22 172.1 18.4 112 98-313 1-113 (299)
42 cd06433 GT_2_WfgS_like WfgS an 99.7 2.5E-17 5.4E-22 156.5 15.9 186 98-463 1-188 (202)
43 PLN02726 dolichyl-phosphate be 99.7 1.5E-16 3.3E-21 159.3 22.4 203 93-462 7-211 (243)
44 cd02522 GT_2_like_a GT_2_like_ 99.7 8.1E-17 1.7E-21 156.9 19.3 178 97-460 1-178 (221)
45 PF03142 Chitin_synth_2: Chiti 99.7 8E-16 1.7E-20 169.4 27.4 169 283-495 201-379 (527)
46 cd04196 GT_2_like_d Subfamily 99.7 1.1E-16 2.4E-21 154.5 16.0 193 98-463 1-197 (214)
47 cd06913 beta3GnTL1_like Beta 1 99.7 5.9E-16 1.3E-20 151.9 20.8 110 99-310 1-110 (219)
48 cd06442 DPM1_like DPM1_like re 99.7 5E-16 1.1E-20 151.7 20.0 107 99-313 1-107 (224)
49 cd06420 GT2_Chondriotin_Pol_N 99.7 3.7E-16 8E-21 147.7 17.8 171 99-463 1-174 (182)
50 cd04186 GT_2_like_c Subfamily 99.7 2.4E-16 5.1E-21 145.3 15.5 156 99-463 1-159 (166)
51 PRK10073 putative glycosyl tra 99.7 1.1E-15 2.4E-20 160.9 18.1 110 94-313 5-114 (328)
52 cd04185 GT_2_like_b Subfamily 99.7 2.8E-15 6.1E-20 144.7 17.2 175 99-475 1-177 (202)
53 cd04188 DPG_synthase DPG_synth 99.6 5.9E-15 1.3E-19 144.0 18.3 108 99-313 1-111 (211)
54 PF13506 Glyco_transf_21: Glyc 99.6 2.9E-15 6.4E-20 144.2 14.7 153 264-488 15-175 (175)
55 cd02526 GT2_RfbF_like RfbF is 99.6 1.4E-15 3.1E-20 150.0 11.5 152 250-474 48-207 (237)
56 cd06423 CESA_like CESA_like is 99.6 1.3E-15 2.8E-20 139.4 9.2 163 99-374 1-169 (180)
57 PTZ00260 dolichyl-phosphate be 99.6 4.8E-13 1E-17 141.4 28.2 116 92-310 67-188 (333)
58 PF00535 Glycos_transf_2: Glyc 99.6 1.3E-15 2.8E-20 139.4 6.6 166 98-374 1-168 (169)
59 PRK10018 putative glycosyl tra 99.6 1.2E-13 2.5E-18 142.6 21.8 109 93-310 3-111 (279)
60 PRK10063 putative glycosyl tra 99.6 1.5E-13 3.2E-18 139.3 19.6 101 95-304 1-102 (248)
61 cd04179 DPM_DPG-synthase_like 99.5 7.3E-14 1.6E-18 132.1 13.5 165 99-374 1-166 (185)
62 cd04187 DPM1_like_bac Bacteria 99.5 1.4E-12 2.9E-17 123.9 16.1 107 250-374 56-162 (181)
63 TIGR01556 rhamnosyltran L-rham 99.4 1.8E-12 3.9E-17 132.6 15.7 151 249-471 45-201 (281)
64 PRK10714 undecaprenyl phosphat 99.4 3.5E-11 7.7E-16 126.7 25.5 42 264-310 75-116 (325)
65 PRK13915 putative glucosyl-3-p 99.4 3.7E-12 8.1E-17 133.1 15.9 118 92-314 28-147 (306)
66 PF10111 Glyco_tranf_2_2: Glyc 99.4 1.6E-11 3.5E-16 126.5 18.2 130 265-463 74-216 (281)
67 cd00761 Glyco_tranf_GTA_type G 99.3 2.4E-11 5.3E-16 108.3 14.7 113 99-324 1-114 (156)
68 KOG2571 Chitin synthase/hyalur 99.3 4.7E-12 1E-16 144.5 12.2 167 265-489 424-596 (862)
69 COG1216 Predicted glycosyltran 99.3 1.6E-11 3.5E-16 127.8 14.7 201 94-469 2-218 (305)
70 COG0463 WcaA Glycosyltransfera 99.1 1.1E-09 2.4E-14 99.9 11.9 47 94-146 2-48 (291)
71 cd02511 Beta4Glucosyltransfera 99.0 2.8E-09 6E-14 106.1 12.7 43 265-312 57-99 (229)
72 KOG2547 Ceramide glucosyltrans 98.7 1E-07 2.2E-12 99.6 10.4 228 92-488 82-314 (431)
73 KOG2978 Dolichol-phosphate man 98.6 1.1E-06 2.4E-11 84.4 13.8 105 250-373 64-175 (238)
74 KOG2977 Glycosyltransferase [G 98.5 4.6E-07 9.9E-12 92.0 8.8 113 96-309 68-185 (323)
75 cd02514 GT13_GLCNAC-TI GT13_GL 98.0 5.3E-05 1.2E-09 80.3 13.0 44 97-144 2-45 (334)
76 KOG3738 Predicted polypeptide 96.9 0.0029 6.2E-08 67.4 8.1 49 92-143 121-169 (559)
77 KOG3737 Predicted polypeptide 96.9 0.0043 9.4E-08 65.9 8.9 49 91-142 151-199 (603)
78 KOG3736 Polypeptide N-acetylga 96.6 0.0028 6.1E-08 71.4 5.6 117 92-313 139-256 (578)
79 PF13704 Glyco_tranf_2_4: Glyc 95.1 0.11 2.5E-06 44.4 8.1 33 109-146 3-35 (97)
80 PF13712 Glyco_tranf_2_5: Glyc 94.4 0.12 2.6E-06 51.7 7.4 47 265-315 40-87 (217)
81 cd00899 b4GalT Beta-4-Galactos 93.7 0.4 8.7E-06 48.1 9.4 37 265-302 48-84 (219)
82 PF03452 Anp1: Anp1; InterPro 90.5 4.3 9.2E-05 42.1 12.6 56 92-151 22-79 (269)
83 PF02364 Glucan_synthase: 1,3- 90.4 0.48 1E-05 55.5 6.3 182 265-516 274-481 (817)
84 TIGR02460 osmo_MPGsynth mannos 90.1 2.3 5E-05 45.3 10.4 41 264-307 141-181 (381)
85 PRK14503 mannosyl-3-phosphogly 90.1 2.1 4.6E-05 45.8 10.1 41 264-307 142-182 (393)
86 PF03071 GNT-I: GNT-I family; 90.0 1.5 3.2E-05 48.3 9.3 49 92-145 90-139 (434)
87 COG4092 Predicted glycosyltran 89.9 4.7 0.0001 41.6 12.0 80 248-330 61-141 (346)
88 PF09488 Osmo_MPGsynth: Mannos 88.7 2.9 6.4E-05 44.7 9.9 40 264-306 141-180 (381)
89 PRK14502 bifunctional mannosyl 85.6 5.5 0.00012 46.4 10.7 41 264-307 146-186 (694)
90 PF01644 Chitin_synth_1: Chiti 82.7 31 0.00067 33.2 12.8 49 251-309 111-163 (163)
91 PF05679 CHGN: Chondroitin N-a 70.6 39 0.00085 38.1 11.5 48 250-305 315-362 (499)
92 PF02709 Glyco_transf_7C: N-te 62.8 5.8 0.00013 33.3 2.3 22 442-463 46-67 (78)
93 PF13896 Glyco_transf_49: Glyc 58.3 13 0.00029 39.4 4.5 36 270-310 118-153 (317)
94 PF11316 Rhamno_transf: Putati 57.2 1.2E+02 0.0027 30.8 11.1 55 248-310 84-140 (234)
95 cd02540 GT2_GlmU_N_bac N-termi 56.7 1.1E+02 0.0024 29.7 10.6 44 265-311 73-117 (229)
96 PF02434 Fringe: Fringe-like; 54.0 26 0.00057 35.8 5.8 30 282-313 85-114 (252)
97 TIGR03584 PseF pseudaminic aci 52.4 1.9E+02 0.004 28.8 11.5 59 265-323 76-134 (222)
98 PLN03153 hypothetical protein; 45.5 66 0.0014 36.5 7.5 30 282-313 209-238 (537)
99 PF06306 CgtA: Beta-1,4-N-acet 40.5 73 0.0016 34.0 6.5 34 265-302 160-193 (347)
100 KOG0916 1,3-beta-glucan syntha 37.4 26 0.00057 43.6 3.0 71 440-515 1173-1244(1679)
101 KOG3916 UDP-Gal:glucosylcerami 36.5 2E+02 0.0044 31.0 9.1 34 265-298 197-230 (372)
102 TIGR03310 matur_ygfJ molybdenu 34.8 1E+02 0.0022 28.9 6.3 42 265-310 74-116 (188)
103 cd04182 GT_2_like_f GT_2_like_ 34.5 1.2E+02 0.0027 28.1 6.7 43 265-310 74-117 (186)
104 PRK00317 mobA molybdopterin-gu 32.4 96 0.0021 29.6 5.7 43 265-311 74-116 (193)
105 PRK09382 ispDF bifunctional 2- 32.1 1.2E+02 0.0025 33.1 6.8 40 267-310 83-122 (378)
106 PF01762 Galactosyl_T: Galacto 30.8 64 0.0014 31.2 4.1 40 266-309 65-105 (195)
107 TIGR02665 molyb_mobA molybdopt 29.8 1.1E+02 0.0023 28.9 5.5 42 265-311 73-115 (186)
108 PF03213 Pox_P35: Poxvirus P35 29.4 1.6E+02 0.0035 31.3 6.9 46 282-331 117-162 (325)
109 PF04724 Glyco_transf_17: Glyc 25.6 1.4E+02 0.003 32.4 5.9 36 268-305 164-199 (356)
110 KOG1413 N-acetylglucosaminyltr 24.8 1.1E+02 0.0024 33.2 4.7 49 93-146 65-114 (411)
111 cd02503 MobA MobA catalyzes th 24.7 2.4E+02 0.0052 26.3 6.8 42 264-309 68-109 (181)
112 PRK02726 molybdopterin-guanine 24.3 3.5E+02 0.0077 26.1 8.1 42 265-310 78-119 (200)
113 COG4097 Predicted ferric reduc 23.2 2.1E+02 0.0046 31.4 6.5 66 92-176 341-406 (438)
114 TIGR01173 glmU UDP-N-acetylglu 22.5 5.7E+02 0.012 27.7 10.2 44 265-312 75-119 (451)
115 KOG4179 Lysyl hydrolase/glycos 22.0 4E+02 0.0087 29.6 8.3 36 267-307 98-133 (568)
No 1
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=100.00 E-value=4.1e-138 Score=1175.68 Aligned_cols=538 Identities=36% Similarity=0.689 Sum_probs=496.1
Q ss_pred CCCCceeeeecCchh-hHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 008144 3 SPLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSR 81 (576)
Q Consensus 3 ~~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~~R~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r 81 (576)
..+||+++.+.++.. .+||+++++++++++++|+||+++.. ..+.|+|+++++||+||+|+|+++|+.+|+|+.|
T Consensus 253 ~~~pL~~~~~i~~~~~~~yR~~~~~~l~~l~~~l~yRi~~~~----~~~~~~Wl~s~~cE~WFaf~Wll~q~~Kw~Pv~R 328 (1079)
T PLN02638 253 ARQPLSRKVSIPSSRINPYRMVIVLRLVILCIFLHYRITNPV----RNAYALWLISVICEIWFALSWILDQFPKWLPVNR 328 (1079)
T ss_pred CCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHHhccC----CccHHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence 378999999985542 67999999999999999999998854 3468999999999999999999999999999999
Q ss_pred cCCCCCCCC-------CCCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHh
Q 008144 82 TVFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRF 154 (576)
Q Consensus 82 ~~~~~~l~~-------~~~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~f 154 (576)
.+++++|.+ +++||.|||||||.||.||||.+++|||+|+||.|||.+||.|||+|||++..|+++|.||++|
T Consensus 329 ~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~F 408 (1079)
T PLN02638 329 ETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEF 408 (1079)
T ss_pred ccCHHHHHHHhccCCCcccCCCccEEEeCCCCccCccHHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHH
Confidence 999998864 2469999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHHHhhCCccCCcccccccCC-CCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhh-------cCC---------C
Q 008144 155 AKWWLPFCRRYGIKTICPQAYFSEAD-SDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVE-------DGE---------Y 217 (576)
Q Consensus 155 a~~w~pfc~~~~v~~r~p~~yf~~~~-~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~-------~g~---------~ 217 (576)
|+.||||||||+|||||||+||+.+. ..+++..++|++||+.||++||+||+|||.+.+ +|+ +
T Consensus 409 A~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~a~~~~~p~~~~~m~dgt~W~g 488 (1079)
T PLN02638 409 ARKWVPFCKKYNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKVRINGLVAKAQKVPEEGWIMQDGTPWPG 488 (1079)
T ss_pred HHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccccccCCccCCC
Confidence 99999999999999999999999974 355566789999999999999999999997652 221 5
Q ss_pred CCCCCCccceehhhcccCcchhhhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCC
Q 008144 218 GNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCN 297 (576)
Q Consensus 218 ~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~ 297 (576)
+++++||+|||+++++++.. |.++.++|+|+||+||||||++||+||||||+++|+|++|||||||+++||||++|
T Consensus 489 ~~~~dHp~IiqVll~~~~~~----d~~g~~lP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmYiN 564 (1079)
T PLN02638 489 NNTRDHPGMIQVFLGHSGGL----DTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYIN 564 (1079)
T ss_pred CCCCCCHHHHHHHhcCCCcc----ccccccccceEEEecccCCCCCcccccchHHHHHHHhhhccCCCeEeecccCcccC
Confidence 68899999999999887642 44567899999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHhcCCCCCcceEEEcccceeccCCccChHHHHHHHHHHHHHHHHhhcCCccccccceEEEcccccccccc
Q 008144 298 DPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTH 377 (576)
Q Consensus 298 ~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~AL~~i~~~ 377 (576)
||++++++||||+||+.|+.+||||+||+|+|++++|+|+|++++||+++++|+||++||+|+||||+|||+||++..|+
T Consensus 565 ns~alr~AMCf~lDp~~g~~vafVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALYG~~p~ 644 (1079)
T PLN02638 565 NSKALREAMCFLMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPP 644 (1079)
T ss_pred chHHHHHhhhhhcCcccCCeeEEecCCcccCCCCCCCcccccceeeeccccccccccCCccccccCcceeehhhcCcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987432
Q ss_pred h----------------------------------------------------------------------hhhhhhcCh
Q 008144 378 T----------------------------------------------------------------------ELKDTFGKS 387 (576)
Q Consensus 378 ~----------------------------------------------------------------------~~~~~fg~~ 387 (576)
+ .+.++||+|
T Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S 724 (1079)
T PLN02638 645 IKPKHKKPGFLSSLCGGSRKKSSKSSKKGSDKKKSGKHVDPTVPVFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQS 724 (1079)
T ss_pred ccccccccccccccccccccccccccchhhccccccccccccccccccccccccccccccchhhhhhhhhhhhhhhcccc
Confidence 1 234789999
Q ss_pred hHHHHhHHhhhhcccCCCCCCchhHHHhhcccccccccccCcccccccccCCCccccHHHHHHHHhcCCeEEEeCCCCCe
Q 008144 388 NVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQ 467 (576)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~ 467 (576)
.+|++|+..+.++... ...+++++++|++|++|+||++|.||+++||.|+|+|||+.||++||++||||+|++|++++
T Consensus 725 ~~fi~S~~~~~~~~~~--~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~P~r~A 802 (1079)
T PLN02638 725 AVFVASTLMENGGVPQ--SATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPA 802 (1079)
T ss_pred HHHHHHHHHhhcCCCC--CCCcHHHHHHHHhhccCCCccCCchhhhcCeeecceecHHHHHHHHHcCCCcEEecCCCchH
Confidence 9999999887765442 34678999999999999999999999999999999999999999999999999999876789
Q ss_pred eEeecCCCHHHHHHHHHHhhhhhHHHHhhhcCCcccCC-CCCCHHHHHHHHhHhHhhHHhHHHHHHHHHHHHHHHHcCCC
Q 008144 468 FLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGP-SRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGIS 546 (576)
Q Consensus 468 ~~g~aP~tl~~~l~Qr~RWa~G~~qv~~~~~~p~~~~~-~~l~~~qrl~y~~~~~~~~~~~~~~~~~~~~P~~~ll~g~~ 546 (576)
+.|++|+|+.+++.||+||++|++|++++|+||++++. ++|++.||++|++.++|+ +.++|.++|+++|++||++|++
T Consensus 803 F~GlAP~~l~d~L~Qr~RWA~G~lqI~fsr~nPl~~G~~~rL~l~QRL~Yl~~~~yp-~~sip~liY~llP~l~Ll~G~~ 881 (1079)
T PLN02638 803 FKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYVNTTIYP-ITSIPLLLYCTLPAVCLLTGKF 881 (1079)
T ss_pred hcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCc
Confidence 99999999999999999999999999999999999763 689999999999999999 9999999999999999999999
Q ss_pred cchhh
Q 008144 547 LYPER 551 (576)
Q Consensus 547 ~~p~~ 551 (576)
+||++
T Consensus 882 i~P~v 886 (1079)
T PLN02638 882 IIPQI 886 (1079)
T ss_pred cCCCc
Confidence 99954
No 2
>PLN02400 cellulose synthase
Probab=100.00 E-value=6.2e-138 Score=1174.66 Aligned_cols=540 Identities=37% Similarity=0.690 Sum_probs=495.8
Q ss_pred CCC-CCCceeeeecCchh-hHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 008144 1 MDS-PLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRP 78 (576)
Q Consensus 1 ~~~-~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~~R~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p 78 (576)
||+ .+||+++.+.++.. .+||+++++++++++++|+||+++..+ ++.|+|+++++||+||+|+|+++|+.+|+|
T Consensus 257 ~~~~~~pL~~~~~i~~~~~~~yR~~~~~~lv~l~~~l~yRi~~~~~----~~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~P 332 (1085)
T PLN02400 257 ADDARLPMSRVVPIPSSRLTPYRIVIILRLIILGFFLQYRVTHPVK----DAYGLWLTSVICEIWFALSWLLDQFPKWYP 332 (1085)
T ss_pred cccccCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCc----ccHHHHHHHHHHHHHHHHHHHHccCccccc
Confidence 355 68999999986553 679999999999999999999988544 368999999999999999999999999999
Q ss_pred ccccCCCCCCCC-------CCCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHH
Q 008144 79 VSRTVFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREA 151 (576)
Q Consensus 79 ~~r~~~~~~l~~-------~~~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea 151 (576)
+.|.+++|+|.+ +++||.|||||||.||.||||.+++|||+|+||.|||.+||.|||+|||++..|+++|.||
T Consensus 333 v~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~Al~Ea 412 (1085)
T PLN02400 333 INRETYLDRLALRYDRDGEPSQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSET 412 (1085)
T ss_pred ccceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHH
Confidence 999999998863 2469999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhhhHHHhhCCccCCcccccccCCC-CCCCCChhhHHHHHHHHHHHHHHHHHHHHhh-------hcCC-------
Q 008144 152 CRFAKWWLPFCRRYGIKTICPQAYFSEADS-DDYFGDSEFMVEKKKIKEKYEMFEEHVTKAV-------EDGE------- 216 (576)
Q Consensus 152 ~~fa~~w~pfc~~~~v~~r~p~~yf~~~~~-~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~-------~~g~------- 216 (576)
++||+.||||||||+|||||||+||+.+.. .++...++|++||++||++||+||+|||.+. ++|+
T Consensus 413 a~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~~~~~~~~~~~~~m~dgt~ 492 (1085)
T PLN02400 413 AEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKIPEEGWTMQDGTP 492 (1085)
T ss_pred HHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhccCCccccccccCcc
Confidence 999999999999999999999999999743 4456678999999999999999999999875 2221
Q ss_pred --CCCCCCCccceehhhcccCcchhhhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCC
Q 008144 217 --YGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDM 294 (576)
Q Consensus 217 --~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~ 294 (576)
+++++|||+||||++++++. .|.++.++|+|+||+||||||++||+||||||+++|+|++|||+|||+++||||
T Consensus 493 W~g~~~~dHp~iIqVll~~~~~----~d~~g~~LP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~ILNlDCDm 568 (1085)
T PLN02400 493 WPGNNPRDHPGMIQVFLGHSGG----LDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDH 568 (1085)
T ss_pred CCCCCCCCCchhhhhhhcCCCC----cccccccCceeEEEeccCCCCCCcchhhhhhHHHHHHhhhhcCCceEEeccccc
Confidence 56889999999999998764 244667899999999999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHHhcCCCCCcceEEEcccceeccCCccChHHHHHHHHHHHHHHHHhhcCCccccccceEEEccccccc
Q 008144 295 YCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYAD 374 (576)
Q Consensus 295 ~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~AL~~i 374 (576)
++|||++++++||||+||+.|+.+||||+||+|+|++++|+|+|++++||++.++|+||++||+|+||||+|||+||++.
T Consensus 569 Y~Nns~a~r~AMCf~lD~~~g~~~afVQFPQrF~gi~~~D~Y~n~~~vffdi~~~GldGlqGP~YvGTGC~frR~aLYG~ 648 (1085)
T PLN02400 569 YFNNSKALKEAMCFMMDPAIGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGY 648 (1085)
T ss_pred ccCCchhHHhhhhheeccCCCceeEEEeCCcccCCCCCCCCcccceeEEeeccccccccCCCccccccCcceeeeeeccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred ccc--------------------------------------------------------------------hhhhhhhcC
Q 008144 375 FTH--------------------------------------------------------------------TELKDTFGK 386 (576)
Q Consensus 375 ~~~--------------------------------------------------------------------~~~~~~fg~ 386 (576)
.|+ +++.++||+
T Consensus 649 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~ 728 (1085)
T PLN02400 649 DPVLTEEDLEPNIIVKSCCGSRKKGKGSKKYNIDKKRAMKRTESNVPIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQ 728 (1085)
T ss_pred CCccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhhhhhccc
Confidence 541 114468999
Q ss_pred hhHHHHhHHhhhhcccCCCCCCchhHHHhhcccccccccccCcccccccccCCCccccHHHHHHHHhcCCeEEEeCCCCC
Q 008144 387 SNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRP 466 (576)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~ 466 (576)
|.+|++|+..+ ++... ....+++++++|++|+||+||++|.||+++||.|+|+|||+.||++||++||||+|++|+++
T Consensus 729 S~~fi~S~~~~-~~~~~-~~~~~~~ll~eA~~V~sC~YE~~T~WG~evGwiYGSvTED~~TG~~LH~rGWrSvY~~p~r~ 806 (1085)
T PLN02400 729 SPVFIAATFME-QGGIP-PSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRP 806 (1085)
T ss_pred cHHHHHHHHHH-hcCCC-CCCCcHHHHHHHHHhhccCCccCCchhhhhCeeccceechHHHHHHHHccCCceEecCCCcH
Confidence 99999999854 32221 23567899999999999999999999999999999999999999999999999999988789
Q ss_pred eeEeecCCCHHHHHHHHHHhhhhhHHHHhhhcCCcccC-CCCCCHHHHHHHHhHhHhhHHhHHHHHHHHHHHHHHHHcCC
Q 008144 467 QFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYG-PSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGI 545 (576)
Q Consensus 467 ~~~g~aP~tl~~~l~Qr~RWa~G~~qv~~~~~~p~~~~-~~~l~~~qrl~y~~~~~~~~~~~~~~~~~~~~P~~~ll~g~ 545 (576)
++.|++|+|+.+++.||+||++|++|++++++||++++ .++|++.||++|++.++|| +.++|.++|+++|++||++|+
T Consensus 807 af~GlAP~~l~d~L~Qr~RWA~G~lqI~~sr~nPl~~G~~~~L~l~QRL~Yl~~~~y~-~~slp~liY~llP~l~LltG~ 885 (1085)
T PLN02400 807 AFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYP-ITSIPLLAYCVLPAFCLITNK 885 (1085)
T ss_pred hhcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999976 3689999999999999999 999999999999999999999
Q ss_pred Ccchhh
Q 008144 546 SLYPER 551 (576)
Q Consensus 546 ~~~p~~ 551 (576)
++||++
T Consensus 886 ~i~P~v 891 (1085)
T PLN02400 886 FIIPEI 891 (1085)
T ss_pred ccCCcc
Confidence 999964
No 3
>PLN02436 cellulose synthase A
Probab=100.00 E-value=1e-137 Score=1168.41 Aligned_cols=539 Identities=37% Similarity=0.684 Sum_probs=495.5
Q ss_pred CC-CCCceeeeecCchh-hHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 008144 2 DS-PLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPV 79 (576)
Q Consensus 2 ~~-~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~~R~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~ 79 (576)
|+ .+||+++.+.++.. .+||+++++++++++++|+||+++..+ ++.|+|+++++||+||+|+|+++|+.+|+|+
T Consensus 267 ~~~~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~~~~----~a~~~Wl~s~~cE~WFaf~Wll~Q~~Kw~Pv 342 (1094)
T PLN02436 267 DEGRQPLSRKLPIPSSKINPYRMIIILRLVILGLFFHYRILHPVN----DAYGLWLTSVICEIWFAVSWILDQFPKWYPI 342 (1094)
T ss_pred cccCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCc----ccHHHHHHHHHHHHHHHHHHHHccCcccccc
Confidence 44 78999999986543 369999999999999999999988543 3689999999999999999999999999999
Q ss_pred cccCCCCCCCC-------CCCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHH
Q 008144 80 SRTVFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREAC 152 (576)
Q Consensus 80 ~r~~~~~~l~~-------~~~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~ 152 (576)
.|.+++|+|.+ +++||.|||||+|.||.||||.+++|||+|+||.|||.+||+|||+|||++..|+++|.||+
T Consensus 343 ~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa 422 (1094)
T PLN02436 343 ERETYLDRLSLRYEKEGKPSELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETS 422 (1094)
T ss_pred cceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHH
Confidence 99999998853 24699999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhhHHHhhCCccCCcccccccCCC-CCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-------CC--------
Q 008144 153 RFAKWWLPFCRRYGIKTICPQAYFSEADS-DDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVED-------GE-------- 216 (576)
Q Consensus 153 ~fa~~w~pfc~~~~v~~r~p~~yf~~~~~-~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~-------g~-------- 216 (576)
+||+.||||||||+|||||||+||+.+.. .+++..++|++||+.||++|||||+|||.+.++ |+
T Consensus 423 ~FAk~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~vp~~~~~m~dgt~W 502 (1094)
T PLN02436 423 EFARKWVPFCKKFSIEPRAPEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFKVKINALVATAQKVPEDGWTMQDGTPW 502 (1094)
T ss_pred HHHHhhcccccccCCCcCCHHHHhhccCCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhhhhccCccC
Confidence 99999999999999999999999999743 445567899999999999999999999987643 11
Q ss_pred -CCCCCCCccceehhhcccCcchhhhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCC
Q 008144 217 -YGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMY 295 (576)
Q Consensus 217 -~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~ 295 (576)
+++++|||+||||++++++. .|.++.++|+|+||+||||||++||+||||||+++|+|++|||+|||+++||||+
T Consensus 503 ~g~~~~dHp~IIqVll~~~~~----~d~~g~~LP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaP~ILNLDCDmY 578 (1094)
T PLN02436 503 PGNNVRDHPGMIQVFLGHSGV----RDVEGNELPRLVYVSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHY 578 (1094)
T ss_pred CCCCCCCCccceEEEecCCCC----cccccccCceEEEEecccCCCCCcchhhhhhhhhhhhheeecCCceEEecccccc
Confidence 56889999999999988653 2456678999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHhcCCCCCcceEEEcccceeccCCccChHHHHHHHHHHHHHHHHhhcCCccccccceEEEcccccccc
Q 008144 296 CNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADF 375 (576)
Q Consensus 296 ~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~AL~~i~ 375 (576)
.|||++++++||||+||+.|+.+||||+||+|+|++++|+|+|++++||++.++|+||++||+|+||||+|||+||++..
T Consensus 579 iNns~a~r~AMCfllD~~~g~~~afVQFPQrF~gi~k~D~Y~n~~~vffdi~~~GlDGlqGP~YvGTGC~frR~aLYG~~ 658 (1094)
T PLN02436 579 INNSKALREAMCFMMDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYD 658 (1094)
T ss_pred cCchHHHHHhhhhhcCCccCCeeEEEcCCcccCCCCCCCcccccceEeeeccccccccCCCccccccCceeeeeeeeccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred cc----------------------------------------------------------------------hhhhhhhc
Q 008144 376 TH----------------------------------------------------------------------TELKDTFG 385 (576)
Q Consensus 376 ~~----------------------------------------------------------------------~~~~~~fg 385 (576)
|+ +.+.++||
T Consensus 659 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG 738 (1094)
T PLN02436 659 APKKKKPPGKTCNCWPKWCCLCCGSRKKKKKKKSKEKKKKKNREASKQIHALENIEEGIEGSNNEKSSETPQLKLEKKFG 738 (1094)
T ss_pred CccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHhhhc
Confidence 33 11347899
Q ss_pred ChhHHHHhHHhhhhcccCCCCCCchhHHHhhcccccccccccCcccccccccCCCccccHHHHHHHHhcCCeEEEeCCCC
Q 008144 386 KSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFR 465 (576)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~ 465 (576)
+|.+|++|+..+.++... +..+++++++|++|+||+||++|.||+++||.|+|+|||+.||++||++||||+|+.|++
T Consensus 739 ~S~~fi~S~~~~~~~~~~--~~~~~s~l~eA~~V~sC~YE~~T~WG~evGwiYGSvTEDv~TG~rLH~rGWrSvY~~P~r 816 (1094)
T PLN02436 739 QSPVFVASTLLENGGVPR--NASPASLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKR 816 (1094)
T ss_pred ccHHHHHHHHHhhcCCCC--CCCcHHHHHHHHHhhcCCCcccChhhHhhCeeccceecHHHHHHHHHcCCCceEeCCCCc
Confidence 999999999888643222 346678999999999999999999999999999999999999999999999999998777
Q ss_pred CeeEeecCCCHHHHHHHHHHhhhhhHHHHhhhcCCcccCC-CCCCHHHHHHHHhHhHhhHHhHHHHHHHHHHHHHHHHcC
Q 008144 466 PQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGP-SRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNG 544 (576)
Q Consensus 466 ~~~~g~aP~tl~~~l~Qr~RWa~G~~qv~~~~~~p~~~~~-~~l~~~qrl~y~~~~~~~~~~~~~~~~~~~~P~~~ll~g 544 (576)
+++.|.+|+|+.+++.||+||++|++|++++|++|++++. ++|+++||++|++.++|+ +.++|.++|+++|++||++|
T Consensus 817 ~AF~GlAP~~L~d~L~Qr~RWA~G~lQIffsr~nPl~~g~~~~L~l~QRL~Yl~~~ly~-l~Slp~liY~~lP~l~LL~G 895 (1094)
T PLN02436 817 PAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYP-WTSIPLIVYCTLPAICLLTG 895 (1094)
T ss_pred hhhcCcCCCCHHHHHHHHHHHhhcceeeeeccCCcchhcccccCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcC
Confidence 8899999999999999999999999999999999999763 579999999999999999 99999999999999999999
Q ss_pred CCcchhh
Q 008144 545 ISLYPER 551 (576)
Q Consensus 545 ~~~~p~~ 551 (576)
+++||++
T Consensus 896 ~~i~P~v 902 (1094)
T PLN02436 896 KFIVPEI 902 (1094)
T ss_pred CeecCcc
Confidence 9999964
No 4
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=100.00 E-value=2e-137 Score=1167.45 Aligned_cols=537 Identities=36% Similarity=0.676 Sum_probs=493.7
Q ss_pred CCCceeeeecCchh-hHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc
Q 008144 4 PLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRT 82 (576)
Q Consensus 4 ~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~~R~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~ 82 (576)
.+||+++.+.++.. .+||+++++++++++++|+||+++ ++..+.|+|+++++||+||+|+|+++|+.+|+|+.|.
T Consensus 192 ~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~----~~~~a~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R~ 267 (1044)
T PLN02915 192 RQPLWRKVPIPSSKINPYRIVIVLRLVILCFFFRFRILT----PAYDAYPLWLISVICEIWFALSWILDQFPKWFPINRE 267 (1044)
T ss_pred CCCceEEEecCcccchhHHHHHHHHHHHHHHHHHHHhcC----cCCCchHHHHHHHHHHHHHHHHHHHccCccccccccc
Confidence 68999999986543 369999999999999999999988 2345689999999999999999999999999999999
Q ss_pred CCCCCCCC-------CCCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhh
Q 008144 83 VFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFA 155 (576)
Q Consensus 83 ~~~~~l~~-------~~~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa 155 (576)
+++|+|.. +.+||.|||||+|.||.||||.+++|||+|+||.|||.+||+|||+|||++..|+++|.||++||
T Consensus 268 t~~drL~~r~e~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA 347 (1044)
T PLN02915 268 TYLDRLSMRFERDGEPNRLAPVDVFVSTVDPLKEPPIITANTVLSILAVDYPVDKVSCYVSDDGASMLLFDTLSETAEFA 347 (1044)
T ss_pred cCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHhHHHHHHHHHHHH
Confidence 99998863 23599999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHhhCCccCCcccccccCC-CCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-------CC---------CC
Q 008144 156 KWWLPFCRRYGIKTICPQAYFSEAD-SDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVED-------GE---------YG 218 (576)
Q Consensus 156 ~~w~pfc~~~~v~~r~p~~yf~~~~-~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~-------g~---------~~ 218 (576)
+.||||||||+|||||||+||+.+. ..+++..++|++||++||++||+||+|||.+.++ |+ ++
T Consensus 348 k~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~~~~~~~~m~dgt~W~g~ 427 (1044)
T PLN02915 348 RRWVPFCKKHNIEPRAPEFYFSQKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWVMQDGTPWPGN 427 (1044)
T ss_pred HhhcchhhhcCCCcCCHHHHhccCCCccccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccccCCccCCCC
Confidence 9999999999999999999999974 3455666899999999999999999999987643 21 56
Q ss_pred CCCCCccceehhhcccCcchhhhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCc
Q 008144 219 NSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCND 298 (576)
Q Consensus 219 ~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~ 298 (576)
++++||+||||++++++. .|.++.++|+|+||+||||||++||+||||||+.+|+|++|||+|||+++||||+.||
T Consensus 428 ~~~dHp~IIqVll~~~~~----~d~~g~~lP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~iLNlDCDmY~Nn 503 (1044)
T PLN02915 428 NTRDHPGMIQVYLGSEGA----LDVEGKELPRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINN 503 (1044)
T ss_pred CCCCCccceEEeecCCCC----cccccCccceeEEEecccCCCCCcchhhhhhhhHhhhhheeecCcEEEeeccccccCc
Confidence 779999999999987653 3446678999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhcCCCCCcceEEEcccceeccCCccChHHHHHHHHHHHHHHHHhhcCCccccccceEEEcccccccccch
Q 008144 299 PTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHT 378 (576)
Q Consensus 299 pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~AL~~i~~~~ 378 (576)
|++++++||||+||+.|..+||||+||+|+|++++|+|+|++++||++.++|+||++||+|+||||+|||+||++..|+.
T Consensus 504 s~a~r~AMCf~lD~~~g~~~afVQFPQrF~gidk~D~Y~n~~~Vffdi~~~GldGlqGP~YvGTGCffrR~aLYG~~pp~ 583 (1044)
T PLN02915 504 SKAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNVVFFDINMKGLDGIQGPVYVGTGCVFNRQALYGYDPPV 583 (1044)
T ss_pred chhhHhhceeeecCCCCCeeEEEeCCcccCCCCCCCCcCccceEEEeeecccccccCCcccccCCceeeeeeecCcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999875431
Q ss_pred --------------------------------------------------------------------------------
Q 008144 379 -------------------------------------------------------------------------------- 378 (576)
Q Consensus 379 -------------------------------------------------------------------------------- 378 (576)
T Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (1044)
T PLN02915 584 SEKRPKMTCDCWPSWCCCCCGGGRRGKSKKSKKGKKGRRSLLGGLKKRKKKGGGGGSMMGKKYGRKKSQAVFDLEEIEEG 663 (1044)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence
Q ss_pred ----------------hhhhhhcChhHHHHhHHhhhhcccCCCCCCchhHHHhhcccccccccccCcccccccccCCCcc
Q 008144 379 ----------------ELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVS 442 (576)
Q Consensus 379 ----------------~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~~G~~~~sit 442 (576)
.+.++||+|.+|++|+..+.++.. .+..+++++++|++|+||+||++|.||+++||.|+|+|
T Consensus 664 ~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~~--~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvT 741 (1044)
T PLN02915 664 LEGYDELEKSSLMSQKNFEKRFGQSPVFIASTLMEDGGLP--EGTNPAALIKEAIHVISCGYEEKTEWGKEIGWIYGSVT 741 (1044)
T ss_pred cccccchhhhhhhhhhhhhhhcCCcHHHHHHHHHhhcCCC--CCCCcHHHHHHHHhccccCCCccCchhHhhCccccccc
Confidence 134589999999999988544322 23467789999999999999999999999999999999
Q ss_pred ccHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHHHHHHHhhhhhHHHHhhhcCCcccC-CCCCCHHHHHHHHhHhH
Q 008144 443 EDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYG-PSRMSLLQSMCYGELSF 521 (576)
Q Consensus 443 ED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G~~qv~~~~~~p~~~~-~~~l~~~qrl~y~~~~~ 521 (576)
||+.||++||++||||+|++|+++++.|++|+|+.+++.||+||++|++|+++++++|++++ .++|+++||++|+++++
T Consensus 742 EDv~TG~rLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lqIf~sr~~Pl~~g~~~~L~l~QRL~Yl~~~~ 821 (1044)
T PLN02915 742 EDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFMSRHCPLWYAYGGKLKWLERLAYINTIV 821 (1044)
T ss_pred cHHHHHHHHHccCCcEEeeCCCcHHhcCcCCCCHHHHHHHHHHHhhhHHHHHHhccCCcccccCCCCCHHHHHHHHHHHH
Confidence 99999999999999999998877899999999999999999999999999999999999975 36899999999999999
Q ss_pred hhHHhHHHHHHHHHHHHHHHHcCCCcchhh
Q 008144 522 FPLLYCLPLWCLATLPQLCLLNGISLYPER 551 (576)
Q Consensus 522 ~~~~~~~~~~~~~~~P~~~ll~g~~~~p~~ 551 (576)
|+ +.++|.++|+++|++||++|++++|..
T Consensus 822 yp-~~slp~liY~llP~l~LLtG~~i~P~~ 850 (1044)
T PLN02915 822 YP-FTSIPLLAYCTIPAVCLLTGKFIIPTL 850 (1044)
T ss_pred HH-HHHHHHHHHHHHHHHHHHcCCcccCcc
Confidence 99 999999999999999999999999964
No 5
>PLN02195 cellulose synthase A
Probab=100.00 E-value=4e-137 Score=1159.57 Aligned_cols=538 Identities=38% Similarity=0.697 Sum_probs=494.5
Q ss_pred CCCceeeeecCchh-hHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc
Q 008144 4 PLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRT 82 (576)
Q Consensus 4 ~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~~R~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~ 82 (576)
.+|||++.+.++.. .+||+++++++++++++|+||+++..+ ++.|+|+++++||+||+|+|+++|+.+|+|++|.
T Consensus 157 ~~pL~~~~~i~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~~----~~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R~ 232 (977)
T PLN02195 157 YEPLSRVIPIPRNKLTPYRAVIIMRLIILGLFFHYRITNPVD----SAFGLWLTSVICEIWFAFSWVLDQFPKWSPINRE 232 (977)
T ss_pred cCCceEEEecCcccchhHHHHHHHHHHHHHHHHHHHhcCccc----cchHHHHHHHHHHHHHHHHHHHhcccccccccce
Confidence 68999999986553 369999999999999999999988543 3569999999999999999999999999999999
Q ss_pred CCCCCCCC-------CCCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhh
Q 008144 83 VFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFA 155 (576)
Q Consensus 83 ~~~~~l~~-------~~~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa 155 (576)
+++|+|.+ ++++|.|||||+|.||.||||.+++|||+|+||.|||.+||.|||+|||++..|+++|.||++||
T Consensus 233 t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA 312 (977)
T PLN02195 233 TYIDRLSARYEREGEPSQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLVETAEFA 312 (977)
T ss_pred ECHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHH
Confidence 99998853 24699999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHhhCCccCCcccccccCCC-CCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-C------C---------CC
Q 008144 156 KWWLPFCRRYGIKTICPQAYFSEADS-DDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVED-G------E---------YG 218 (576)
Q Consensus 156 ~~w~pfc~~~~v~~r~p~~yf~~~~~-~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~-g------~---------~~ 218 (576)
+.||||||||+|||||||+||+.+.. .++...++|++||++||++||+||+|||.+.++ + + ++
T Consensus 313 ~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~k~RIe~~~~~~~~~~~~~~~m~d~t~W~g~ 392 (977)
T PLN02195 313 RKWVPFCKKYSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEYKVRVNALVAKAQKTPEEGWTMQDGTPWPGN 392 (977)
T ss_pred HhhcccccccCCCcCCHHHHhccCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccccccCCccCCCC
Confidence 99999999999999999999999744 445667899999999999999999999987643 1 1 56
Q ss_pred CCCCCccceehhhcccCcchhhhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCc
Q 008144 219 NSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCND 298 (576)
Q Consensus 219 ~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~ 298 (576)
+++|||+||||+++++++ .|.++.++|+|+||+||||||++||+||||||+++|+|+.|||+|||+++||||++++
T Consensus 393 ~~~dHp~IIqVll~~~~~----~d~~g~~lP~LVYVSREKrPg~~Hh~KAGamNallrvSavmTNap~il~lDcDmy~n~ 468 (977)
T PLN02195 393 NTRDHPGMIQVFLGETGA----RDIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNN 468 (977)
T ss_pred CCCCCcchhhhhccCCCC----cccccccCceeEEEeccCCCCCCcccccchhHHHHHHhhhccCCCeEEEecCccccCc
Confidence 889999999999876542 2445678999999999999999999999999999999999999999999999999998
Q ss_pred hHHHHHHHHHhcCCCCCcceEEEcccceeccCCccChHHHHHHHHHHHHHHHHhhcCCccccccceEEEcccccccccch
Q 008144 299 PTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHT 378 (576)
Q Consensus 299 pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~AL~~i~~~~ 378 (576)
|++++++||||+||+.|+++||||+||+|+|++++|+|++++++||+++++|+||++||+|+||||+|||+||++.+|+.
T Consensus 469 s~~lr~AMCf~~D~~~g~~va~VQ~PQ~F~~i~~~D~y~~~~~~ffd~~~~g~dglqGP~YvGTGC~fRR~ALyG~~p~~ 548 (977)
T PLN02195 469 SKAVREAMCFLMDPVVGRDVCYVQFPQRFDGIDRSDRYANRNVVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGYGPPS 548 (977)
T ss_pred HHHHHHHHhhccCcccCCeeEEEcCCcccCCCCCCCCCCcccceeeeeeeccccccCCccccccCceeeehhhhccCccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999875321
Q ss_pred ---------------------------------------------------------------hhhhhhcChhHHHHhHH
Q 008144 379 ---------------------------------------------------------------ELKDTFGKSNVLINSLH 395 (576)
Q Consensus 379 ---------------------------------------------------------------~~~~~fg~~~~~~~~~~ 395 (576)
++.++||+|.+|++|+.
T Consensus 549 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi~S~~ 628 (977)
T PLN02195 549 LPRLPKSSSSSSSCCCPTKKKPEQDPSEIYRDAKREDLNAAIFNLREIDNYDEYERSMLISQMSFEKTFGLSSVFIESTL 628 (977)
T ss_pred cccccccccccccccccccccccccchhhccccccccccccccccccccccchhhhhhhhhhhHHHHhhcccHHHHHHHH
Confidence 23468999999999998
Q ss_pred hhhhcccCCCCCCchhHHHhhcccccccccccCcccccccccCCCccccHHHHHHHHhcCCeEEEeCCCCCeeEeecCCC
Q 008144 396 QSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTN 475 (576)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~t 475 (576)
.+.++... ...+++++++|++|+||+||++|.||+++||.|+|+|||+.||++||++||||+|++|+++++.|++|+|
T Consensus 629 ~~~~~~~~--~~~~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rlH~rGWrSvY~~p~r~af~G~AP~~ 706 (977)
T PLN02195 629 MENGGVPE--SANPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPVRPAFKGSAPIN 706 (977)
T ss_pred HHhcCCCC--CCCcHHHHHHHHhhhcccCccccchhhhcCeeccceecHHHHHHHHHccCCcEEecCCccHHhcccCCCC
Confidence 87755444 3456789999999999999999999999999999999999999999999999999998778999999999
Q ss_pred HHHHHHHHHHhhhhhHHHHhhhcCCcccCC--CCCCHHHHHHHHhHhHhhHHhHHHHHHHHHHHHHHHHcCCCcchhhH
Q 008144 476 LNDLLIQGTRWGSGLTDVGLSRFCPLLYGP--SRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPERF 552 (576)
Q Consensus 476 l~~~l~Qr~RWa~G~~qv~~~~~~p~~~~~--~~l~~~qrl~y~~~~~~~~~~~~~~~~~~~~P~~~ll~g~~~~p~~~ 552 (576)
+.+++.||+||++|++|++++++||++++. ++|+++||++|++.++|+ +.++|.++|+++|++||++|+++||++.
T Consensus 707 L~~~L~Qr~RWA~G~lqI~~sr~nPl~~g~~~~~L~~~QRL~Yl~~~ly~-~~slp~liY~~lP~l~Ll~G~~i~P~vs 784 (977)
T PLN02195 707 LSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLAYINTIVYP-FTSLPLIAYCTLPAICLLTGKFIIPTLS 784 (977)
T ss_pred HHHHHHHHHHHHhchhhhhhccCCccccccCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCeecccch
Confidence 999999999999999999999999999763 689999999999999999 9999999999999999999999999753
No 6
>PLN02189 cellulose synthase
Probab=100.00 E-value=4.1e-137 Score=1164.54 Aligned_cols=538 Identities=36% Similarity=0.681 Sum_probs=493.7
Q ss_pred CCCCceeeeecCchh-hHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 008144 3 SPLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSR 81 (576)
Q Consensus 3 ~~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~~R~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r 81 (576)
..+||+++.+.++.. .+||+++++++++++++|+||+++..+ ++.|+|+++++||+||+|+|+++|+.+|+|+.|
T Consensus 235 ~~~pL~~~~~~~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~~----~~~~~W~~s~~~E~wFaf~Wll~q~~kw~Pv~R 310 (1040)
T PLN02189 235 ARQPLSRKVPIASSKVNPYRMVIVARLVVLAFFLRYRILHPVH----DAIGLWLTSIICEIWFAVSWILDQFPKWFPIDR 310 (1040)
T ss_pred CCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhcCcCc----cchHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence 378999999986543 369999999999999999999988543 358999999999999999999999999999999
Q ss_pred cCCCCCCCC-------CCCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHh
Q 008144 82 TVFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRF 154 (576)
Q Consensus 82 ~~~~~~l~~-------~~~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~f 154 (576)
.+++|+|.+ +.+||.|||||||.||.||||.+++|||+|+||.|||.+||.|||+|||++..|+++|.||++|
T Consensus 311 ~t~~drL~~r~~~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~F 390 (1040)
T PLN02189 311 ETYLDRLSLRYEREGEPNMLSPVDIFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYVSDDGASMLTFEALSETAEF 390 (1040)
T ss_pred eeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHH
Confidence 999998854 1349999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHHHhhCCccCCcccccccCC-CCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhh-------cCC---------C
Q 008144 155 AKWWLPFCRRYGIKTICPQAYFSEAD-SDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVE-------DGE---------Y 217 (576)
Q Consensus 155 a~~w~pfc~~~~v~~r~p~~yf~~~~-~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~-------~g~---------~ 217 (576)
|+.||||||||+|||||||+||+.+. ..+++..++|++||+.||++||+||+|||.+.. +|+ +
T Consensus 391 A~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~kvRI~~l~a~~~~~p~~~~~m~dGt~W~g 470 (1040)
T PLN02189 391 ARKWVPFCKKFSIEPRAPEFYFSLKVDYLKDKVQPTFVKERRAMKREYEEFKVRINAIVAKAQKVPPEGWIMQDGTPWPG 470 (1040)
T ss_pred HHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCccCCccceeccCccCCC
Confidence 99999999999999999999999974 345566789999999999999999999997642 111 5
Q ss_pred CCCCCCccceehhhcccCcchhhhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCC
Q 008144 218 GNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCN 297 (576)
Q Consensus 218 ~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~ 297 (576)
++++|||+|||+++++++.. |.++.++|+|+||+||||||++||+||||||+++|+|++|||||||+++||||++|
T Consensus 471 ~~~~dHp~IiQVll~~~~~~----d~~g~~lP~LVYVSREKrPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmY~N 546 (1040)
T PLN02189 471 NNTRDHPGMIQVFLGHSGGH----DTEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYIN 546 (1040)
T ss_pred CCCCCCHHHHHHHhcCCCCc----cccccccceeEEEeccCCCCCCcccchhhHHHHHHHhhhccCCCeEEEccCccccC
Confidence 68899999999999986642 34577899999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHhcCCCCCcceEEEcccceeccCCccChHHHHHHHHHHHHHHHHhhcCCccccccceEEEcccccccccc
Q 008144 298 DPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTH 377 (576)
Q Consensus 298 ~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~AL~~i~~~ 377 (576)
||++++++||||+||+.|+++||||+||+|+|++++|+|+|++++||+++++|+||++||+|+||||+|||+||++..|+
T Consensus 547 ns~alr~AMCfflDp~~g~~vAfVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALyG~~p~ 626 (1040)
T PLN02189 547 NSKAVREAMCFLMDPQIGRKVCYVQFPQRFDGIDTHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYDPP 626 (1040)
T ss_pred chHHHHHhhhhhcCCccCceeEEEeCccccCCCCCCCccCCccceeeeeeecccccCCCccccccCceeeeeeeeccCcc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999987552
Q ss_pred -------------------------------------------------hhhhhhhcChhHHHHhHHhhhhcccCCCCCC
Q 008144 378 -------------------------------------------------TELKDTFGKSNVLINSLHQSYKQNNANGENF 408 (576)
Q Consensus 378 -------------------------------------------------~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~ 408 (576)
+++.++||+|.+|++|+..+..+... ...
T Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~~~--~~~ 704 (1040)
T PLN02189 627 KGPKRPKMVTCDCCPCFGRRKKKHAKNGLNGEVAALGGMESDKEMLMSQMNFEKKFGQSAIFVTSTLMEEGGVPP--SSS 704 (1040)
T ss_pred cccccccccccchhhhcccccccccccccccccccccccchhhhhhhhhhhhHhhhccchhhhhhhhhhhcCCCC--CCC
Confidence 12346899999999999888433222 345
Q ss_pred chhHHHhhcccccccccccCcccccccccCCCccccHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHHHHHHHhhh
Q 008144 409 SNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGS 488 (576)
Q Consensus 409 ~~~~~~~a~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~RWa~ 488 (576)
+.+++++|++|+||+||++|.||+++||.|+|+|||+.||++||++||||+|++|+++++.|+||+|+.+++.||+||++
T Consensus 705 ~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTED~~TG~rlH~rGWrSvY~~p~r~AF~GlAP~~L~~~L~Qr~RWA~ 784 (1040)
T PLN02189 705 PAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGSAPINLSDRLNQVLRWAL 784 (1040)
T ss_pred cHHHHHHHHHhhccccccCCchhhccCeeccccccHHHHHHHHHccCCceEecCCCcHHhcCcCCCCHHHHHHHHHHHhh
Confidence 67899999999999999999999999999999999999999999999999999887899999999999999999999999
Q ss_pred hhHHHHhhhcCCcccCC--CCCCHHHHHHHHhHhHhhHHhHHHHHHHHHHHHHHHHcCCCcchhh
Q 008144 489 GLTDVGLSRFCPLLYGP--SRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPER 551 (576)
Q Consensus 489 G~~qv~~~~~~p~~~~~--~~l~~~qrl~y~~~~~~~~~~~~~~~~~~~~P~~~ll~g~~~~p~~ 551 (576)
|++|++++++||++++. ++|++.||++|++.++|+ +.++|.++|+++|++||++|+++||++
T Consensus 785 G~lqI~~sr~nPl~~g~~~~~L~l~QRL~Yl~~~ly~-~~sip~liY~~lP~l~Ll~g~~i~p~v 848 (1040)
T PLN02189 785 GSVEIFFSRHSPLLYGYKGGNLKWLERFAYVNTTIYP-FTSLPLLAYCTLPAICLLTGKFIMPPI 848 (1040)
T ss_pred hhHHHhhccCCccccccCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCcccCcc
Confidence 99999999999999763 579999999999999999 999999999999999999999999964
No 7
>PLN02248 cellulose synthase-like protein
Probab=100.00 E-value=3.9e-136 Score=1158.31 Aligned_cols=555 Identities=34% Similarity=0.592 Sum_probs=498.4
Q ss_pred CCCceeeeecCchh-hHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc
Q 008144 4 PLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRT 82 (576)
Q Consensus 4 ~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~~R~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~ 82 (576)
.+||+++.+.++.. .+||+++++++++++++|+||+++ ++..+.|+|+++++||+||+|+|+++|+.+|+|+.|.
T Consensus 267 ~~pL~~~~~i~~~il~pyRl~~~~rlv~l~~fl~~Ri~~----~~~~~~~~W~~s~~cE~WFaf~Wll~q~~Kw~Pv~R~ 342 (1135)
T PLN02248 267 WRPLTRKVKISAAILSPYRLLILIRLVVLGLFLTWRVRN----PNEDAMWLWGMSVVCEIWFAFSWLLDQLPKLCPINRA 342 (1135)
T ss_pred CCCceeeeecCcccccHHHHHHHHHHHHHHHHHHHHhcC----CCCcchHHHHHHHHHHHHHHHHHHHhccccccccccc
Confidence 48999999986543 369999999999999999999988 2345689999999999999999999999999999999
Q ss_pred CCCCCCCC------------CCCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHH
Q 008144 83 VFPERLPE------------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMRE 150 (576)
Q Consensus 83 ~~~~~l~~------------~~~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~E 150 (576)
+++++|.+ +++||.|||||||.||+||||.+++|||+|+||.|||.+||.|||+|||++..|+++|.|
T Consensus 343 t~~~rL~~r~e~~~~~~p~g~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKLacYvSDDGgS~LTf~AL~E 422 (1135)
T PLN02248 343 TDLAVLKEKFETPSPSNPTGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLTFEAMAE 422 (1135)
T ss_pred cCHHHHHHHhccccccCCCCcccCCcceeEeecCCCccCcchHHHHHHHHHhcccccccceeEEEecCCchHHHHHHHHH
Confidence 99887743 136999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhhHHHhhCCccCCcccccccCCC-CCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc---------------
Q 008144 151 ACRFAKWWLPFCRRYGIKTICPQAYFSEADS-DDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVED--------------- 214 (576)
Q Consensus 151 a~~fa~~w~pfc~~~~v~~r~p~~yf~~~~~-~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~--------------- 214 (576)
|++||+.||||||||+|||||||+||+.+.. .+.+..++|++||++||++|||||+|||.+.+.
T Consensus 423 Aa~FA~~WVPFCrKh~IepRaPe~YFs~~~~~~~~~~~~~F~~d~r~~KreYee~K~RIe~l~~~~~~rs~~~n~~~e~~ 502 (1135)
T PLN02248 423 AASFARIWVPFCRKHDIEPRNPESYFSLKRDPTKNKVRPDFVKDRRRVKREYDEFKVRINGLPDSIRRRSDAYNAREEIK 502 (1135)
T ss_pred HHHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCccchhHHHHHHHHHHHHHHHHHHHHhhhhhccccccccchhHHHH
Confidence 9999999999999999999999999998744 445566899999999999999999999877320
Q ss_pred ---------------------------C-----------CCCCCCCCccceehhhcccCc--------chh--hhhcccc
Q 008144 215 ---------------------------G-----------EYGNSQNHSTIIEIIQETFGE--------SET--IRQADLV 246 (576)
Q Consensus 215 ---------------------------g-----------~~~~~~~~p~~i~~~~~~~~~--------~~~--~~~~~~~ 246 (576)
| .+..+++||+||||++++++. +.. .++..+.
T Consensus 503 ~~~~~~~~~~~~~~e~~~~~~~~wm~dgt~wpg~W~~~~~~~~~~dH~~IIqVll~~p~~e~~~g~~~~~~~~d~~~~d~ 582 (1135)
T PLN02248 503 AKKKQRESGGGDPSEPLKVPKATWMADGTHWPGTWLSSAPDHSRGDHAGIIQVMLKPPSDEPLMGSADDENLIDFTDVDI 582 (1135)
T ss_pred hhhhhhhhcccccccccccccceeeccCCcCCCcccCcccCCCCCCCcceeEEeccCCCcccccCccccccccccccccc
Confidence 0 045788999999999876541 112 2334566
Q ss_pred CCCcEEEEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCcceEEEcccce
Q 008144 247 EMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQK 326 (576)
Q Consensus 247 ~~P~l~yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~ 326 (576)
++|+|+||+||||||++||+||||||+.+|+|+.|||||||+++||||+++||++++++||||+||+ |.++||||+||+
T Consensus 583 ~lP~LVYVSREKRPg~~Hh~KAGAMNALlRVSavmTNgPfILNLDCDmYiNns~alr~AMCf~lD~~-g~~vAfVQFPQr 661 (1135)
T PLN02248 583 RLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSLAIREGMCFMMDRG-GDRICYVQFPQR 661 (1135)
T ss_pred ccceeEEEecccCCCCCcccccchhhhHHHhhhhccCCCeEEEeccCcccCCchhHHhcchheecCC-CCceEEEcCCcc
Confidence 8999999999999999999999999999999999999999999999999999999999999999997 888999999999
Q ss_pred eccCCccChHHHHHHHHHHHHHHHHhhcCCccccccceEEEcccccccccchh---------------------------
Q 008144 327 FHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTE--------------------------- 379 (576)
Q Consensus 327 f~n~~~~d~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~AL~~i~~~~~--------------------------- 379 (576)
|+|++++|+|+|++++||+++++|+||++||+||||||+|||+||++.+|++.
T Consensus 662 F~~I~k~D~Ygn~~~Vffdi~~~GlDGlqGP~YvGTGCffRR~ALYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (1135)
T PLN02248 662 FEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRIALYGFDPPRAKEHSGCFGSCKFTKKKKKETSASEPEE 741 (1135)
T ss_pred cCCCCCCCccCCcceeeeeeeeccccccCCccccccCceeeehhhcCcCCcccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999865311
Q ss_pred --------------hhhhhcChhHHHHhHHhhhhcccCC-----------------C-CCCchhHHHhhccccccccccc
Q 008144 380 --------------LKDTFGKSNVLINSLHQSYKQNNAN-----------------G-ENFSNVLQEETGVLASCSYEHQ 427 (576)
Q Consensus 380 --------------~~~~fg~~~~~~~~~~~~~~~~~~~-----------------~-~~~~~~~~~~a~~v~~c~ye~~ 427 (576)
+.++||+|.+|++|...+..+.... . ...+.+++++|++|++|+||++
T Consensus 742 ~~~~~~~~~~~~~~~~~rfG~S~~fi~S~~~a~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~ 821 (1135)
T PLN02248 742 QPDLEDDDDLELSLLPKRFGNSTMFAASIPVAEFQGRPLADHPSVKNGRPPGALTVPREPLDAATVAEAISVISCWYEDK 821 (1135)
T ss_pred cccccccchhhhhhhhhhhccchhhhhhhHHHhhcccccccccccccccccccccccccCCcHHHHHHHHhhcccccccC
Confidence 2358999999999997775321111 1 1345688999999999999999
Q ss_pred CcccccccccCCCccccHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHHHHHHHhhhhhHHHHhhhcCCcccCCCC
Q 008144 428 TKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSR 507 (576)
Q Consensus 428 t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G~~qv~~~~~~p~~~~~~~ 507 (576)
|.||+++||.|+|+|||+.||++||++||||+||+|+++++.|++|+|+.+++.||+||++|++|+++++++|++.+ ++
T Consensus 822 T~WG~evG~~YGSvTEDv~TGlrLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIf~sr~~Pll~~-~~ 900 (1135)
T PLN02248 822 TEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLAS-RR 900 (1135)
T ss_pred CchhhhcCeeecceechHHHHHHHHhcCCceEeCCCChHhhcCCCCCCHHHHHHHHHHHhhchHHHHhccCCccccC-CC
Confidence 99999999999999999999999999999999998778999999999999999999999999999999999999875 48
Q ss_pred CCHHHHHHHHhHhHhhHHhHHHHHHHHHHHHHHHHcCCCcchhhHHHHHHhhhhHHHH
Q 008144 508 MSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPERFVNTCKRSFPLEVQ 565 (576)
Q Consensus 508 l~~~qrl~y~~~~~~~~~~~~~~~~~~~~P~~~ll~g~~~~p~~~~~~~~~~~~~~~~ 565 (576)
|++.||++|++.++|+ +.+++.++|+++|++||++|+++||+....++.|.+++.+.
T Consensus 901 Lsl~QRL~Yl~~~lyp-f~Slp~liY~llP~l~LLtGi~~~p~~~~~fl~yll~l~l~ 957 (1135)
T PLN02248 901 LKFLQRIAYLNVGIYP-FTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLVYLLIITIT 957 (1135)
T ss_pred CCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCcccccccHHHHHHHHHHHHH
Confidence 9999999999999999 99999999999999999999999998877777888776443
No 8
>PLN02190 cellulose synthase-like protein
Probab=100.00 E-value=7.8e-134 Score=1113.18 Aligned_cols=529 Identities=36% Similarity=0.655 Sum_probs=483.4
Q ss_pred CCCCCCceeeeecCchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 008144 1 MDSPLPLHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVS 80 (576)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~yl~~R~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~ 80 (576)
+.+.+|||++.+.++. ++|++.+++++++++|++||+++.++. .++|+++++||+|++++|+++|+.+|+|++
T Consensus 5 ~~~~~pL~~~~~~~~~--~~r~~~~~vl~~~~~~l~~R~~~~~~~-----~~~W~~~~~~E~wf~~~WlL~q~~kw~pv~ 77 (756)
T PLN02190 5 SSSLPPLCERISHKSY--FLRAVDLTILGLLFSLLLYRILHMSEN-----DTVWLVAFLCESCFSFVWLLITCIKWSPAE 77 (756)
T ss_pred cCCCCCceeeeeccch--hHHHHHHHHHHHHHHHHHHHHhCCCcc-----cHHHHHHHHHHHHHHHHHHHhccceeeecC
Confidence 3568999999998554 599999999999999999999998764 258999999999999999999999999999
Q ss_pred ccCCCCCCCCC-CCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhh
Q 008144 81 RTVFPERLPED-DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWL 159 (576)
Q Consensus 81 r~~~~~~l~~~-~~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~ 159 (576)
|.++|++|.+. +++|+||||||||||.||||.+++|||+|+++.|||.+|+.|||+|||+++.|+++|.||++||+.||
T Consensus 78 r~~~p~~l~~r~~~Lp~VDvFV~TaDP~kEPpl~v~nTvLSilA~dYP~eklscYvSDDG~s~LT~~al~EAa~FA~~Wv 157 (756)
T PLN02190 78 YKPYPDRLDERVHDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWV 157 (756)
T ss_pred CCCCcHHHHHhhccCCcceEEEecCCCCcCCHHHHHHHHHHHHhccCCccccceEEecCCCcHhHHHHHHHHHHHHhhhc
Confidence 99999998763 46999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHhhCCccCCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-------CC-----CCCCCCCccce
Q 008144 160 PFCRRYGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVED-------GE-----YGNSQNHSTII 227 (576)
Q Consensus 160 pfc~~~~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~-------g~-----~~~~~~~p~~i 227 (576)
||||||+|||||||+||+..... ..+++|++||++||++|||||+|||++... ++ +++++|||+||
T Consensus 158 PFCrK~~IepRaPe~YF~~~~~~--~~~~~f~~e~~~~K~eYee~k~ri~~a~~~~~~~~~~~~~~~~~~~~~~dH~~ii 235 (756)
T PLN02190 158 PFCKKYNVRVRAPFRYFLNPPVA--TEDSEFSKDWEMTKREYEKLSRKVEDATGDSHWLDAEDDFEAFSNTKPNDHSTIV 235 (756)
T ss_pred ccccccCCCcCCHHHHhcCCCCC--CCCchhHHHHHHHHHHHHHHHHHHHhhccCCCCcccCCcccccCCCCCCCCccce
Confidence 99999999999999999975322 234799999999999999999999998421 11 67899999999
Q ss_pred ehhhcccCcchhhhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHH
Q 008144 228 EIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMC 307 (576)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~P~l~yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~ 307 (576)
||++++++. +.++.++|+++||+|||||+++||+||||||+.+|+|+.|||+|||+++||||+.|||++++++||
T Consensus 236 qVll~~~~~-----~~~~~~lP~LVYvSREKrP~~~Hh~KAGAmNaLlRVSavmtNaP~iLnlDCDmY~Nns~~~r~AmC 310 (756)
T PLN02190 236 KVVWENKGG-----VGDEKEVPHLVYISREKRPNYLHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYANEADVVRQAMC 310 (756)
T ss_pred EEEecCCCC-----ccccccCceEEEEeccCCCCCCcccccchhHHHHHHhhhhccCCeEEEecCccccCchhHHHHhhh
Confidence 999998653 234678999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCC-cceEEEcccceeccCCccChHHHHHHHHHHHHHHHHhhcCCccccccceEEEcccccccccc---------
Q 008144 308 FHLDPKIS-SSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTH--------- 377 (576)
Q Consensus 308 ~f~Dp~~g-~~vg~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~AL~~i~~~--------- 377 (576)
||+|++.+ +.+||||+||+|+ |+|+|++++||++.+.|+||++||+|+||||+|||+||++..|+
T Consensus 311 f~ld~~~~~~~~~fVQfPQ~F~-----D~y~n~~~v~f~~~~~GldGlqGP~YvGTGCffrR~alyG~~p~~~~~~~~~~ 385 (756)
T PLN02190 311 IFLQKSKNSNHCAFVQFPQEFY-----DSNTNELTVLQSYLGRGIAGIQGPIYIGSGCFHTRRVMYGLSSDDLEDDGSLS 385 (756)
T ss_pred hhcCCCCCCCeeEEEeCchhhc-----cccCccceEEEEEeeccccccCCcccccCCcceEeeeecCCCccccccccccc
Confidence 99998744 5799999999997 67999999999999999999999999999999999999998643
Q ss_pred ----------hhhhhhhcChhHHHHhHHhhhhcccCCCCCCchhHHHhhcccccccccccCcccccccccCCCccccHHH
Q 008144 378 ----------TELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFT 447 (576)
Q Consensus 378 ----------~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~~G~~~~sitED~~t 447 (576)
.++.++||+|++|++|+..+.++.... ....++++++|++|+||+||++|.||+++||.|+|+|||+.|
T Consensus 386 ~~~~~~~~~~~~~~~~fg~s~~f~~s~~~~~~~~~~~-~~~~~~~~~eA~~V~sC~YE~~T~WG~evG~~ygSitED~~T 464 (756)
T PLN02190 386 SVATREFLAEDSLAREFGNSKEMVKSVVDALQRKPNP-QNSLTNSIEAAQEVGHCHYEYQTSWGNTIGWLYDSVAEDLNT 464 (756)
T ss_pred ccccccccchhhhhhhcCCcHHHHHHHHHHhccCCCC-ccchHHHHHHHHhhcccCCCCCCchhhccCcccceeechHHH
Confidence 125589999999999998877543322 233468999999999999999999999999999999999999
Q ss_pred HHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHHHHHHHhhhhhHHHHhhhcCCcccC-CCCCCHHHHHHHHhHhHhhHHh
Q 008144 448 GFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYG-PSRMSLLQSMCYGELSFFPLLY 526 (576)
Q Consensus 448 ~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G~~qv~~~~~~p~~~~-~~~l~~~qrl~y~~~~~~~~~~ 526 (576)
|++||++||||+||+|+++++.|.+|+++.+.+.||+||++|++|++++++||++.+ .++|++.||++|++.++ | ++
T Consensus 465 Gl~mh~rGWrSvY~~p~~~AFlG~aP~~l~~~L~Q~~RWa~G~lqI~fsr~nPl~~g~~~~L~l~QRLaYl~~~~-~-~~ 542 (756)
T PLN02190 465 SIGIHSRGWTSSYISPDPPAFLGSMPPGGPEAMVQQRRWATGLIEVLFNKQSPLIGMFCRKIRFRQRLAYLYVFT-C-LR 542 (756)
T ss_pred HHHHHccCCceEecCCCchhhcCcCCCChHHHhhhhhhHhhhhHHHHHhcCCCceeccCCCCCHHHHHHHHHHHH-H-HH
Confidence 999999999999999888999999999999999999999999999999999999985 46899999999999877 8 99
Q ss_pred HHHHHHHHHHHHHHHHcCCCcchhh
Q 008144 527 CLPLWCLATLPQLCLLNGISLYPER 551 (576)
Q Consensus 527 ~~~~~~~~~~P~~~ll~g~~~~p~~ 551 (576)
++|+++|+++|++||++|+++||+.
T Consensus 543 sip~l~Y~~lP~l~Ll~g~~i~P~~ 567 (756)
T PLN02190 543 SIPELIYCLLPAYCLLHNSALFPKG 567 (756)
T ss_pred HHHHHHHHHHHHHHHHcCCccccCc
Confidence 9999999999999999999999975
No 9
>PLN02893 Cellulose synthase-like protein
Probab=100.00 E-value=9.9e-132 Score=1101.88 Aligned_cols=525 Identities=42% Similarity=0.779 Sum_probs=474.4
Q ss_pred CCCCCceeeeecCchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 008144 2 DSPLPLHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSR 81 (576)
Q Consensus 2 ~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~yl~~R~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r 81 (576)
.+.+||||+++. +.+.++|+++++++++++++++||+++..... ..|.|+++++||+||+|+|+++|+.+|+|++|
T Consensus 9 ~~~~pL~~~~~~-~~~~~~R~~~~~~~~~i~~ll~~r~~~~~~~~---~~~~w~~~~~~e~wf~f~W~l~q~~k~~Pv~r 84 (734)
T PLN02893 9 TGAPPLHTCHPM-RRTIANRVFAVVYSCAILALLYHHVIALLHST---TTLITLLLLLADIVLAFMWATTQAFRMCPVHR 84 (734)
T ss_pred CCCCCceeeeec-CCchHHHHHHHHHHHHHHHHHHHHhccccccc---chHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence 357999999997 56677999999999999999999998876542 27899999999999999999999999999999
Q ss_pred cCCCCCCCC---CCCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhh
Q 008144 82 TVFPERLPE---DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWW 158 (576)
Q Consensus 82 ~~~~~~l~~---~~~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w 158 (576)
.+++|+|.. .+++|.|||||||.||.||||.+++|||+|+|+.|||.||+.|||+|||++..|+++|.||++||+.|
T Consensus 85 ~~~~~~L~~~~~~~~lP~vDvfv~TaDP~~Epp~~~~ntvLSilA~dyp~~kls~YvSDDGgs~lt~~al~Eaa~FA~~W 164 (734)
T PLN02893 85 RVFIEHLEHYAKESDYPGLDVFICTADPYKEPPMGVVNTALSVMAYDYPTEKLSVYVSDDGGSKLTLFAFMEAAKFATHW 164 (734)
T ss_pred ccCHHHHhhhcccccCCcceeeeccCCcccCchHHHHHHHHHHHhhccCccceEEEEecCCccHHHHHHHHHHHHHHHhh
Confidence 999999874 35799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHhhCCccCCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCC--------------------CC
Q 008144 159 LPFCRRYGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGE--------------------YG 218 (576)
Q Consensus 159 ~pfc~~~~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~--------------------~~ 218 (576)
|||||||+|||||||+||+.+. +++++||+.||++|||||+|||.+.++|. |+
T Consensus 165 vPFCrk~~ie~R~P~~YF~~~~-------~~~~~e~~~~k~~Yee~k~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~ 237 (734)
T PLN02893 165 LPFCKKNKIVERCPEAYFSSNS-------HSWSPETEQIKMMYESMKVRVENVVERGKVSTDYITCDQEREAFSRWTDKF 237 (734)
T ss_pred cccccccCCCcCCHHHHhccCC-------CccchHHHHHHHHHHHHHHHHHHHHhcCcCchhhhhhcccccccccCcCCC
Confidence 9999999999999999999862 34678999999999999999998853321 45
Q ss_pred CCCCCccceehhhcccCcchhhhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCc
Q 008144 219 NSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCND 298 (576)
Q Consensus 219 ~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~ 298 (576)
+++|||+|||++++++++ .|.++.++|+++|++||||||++||+||||||+++++|+.|+|||||+++||||+++|
T Consensus 238 ~~~dH~~ivqV~l~~~~~----~d~~g~~lP~lvYvsReKrp~~~Hh~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n~ 313 (734)
T PLN02893 238 TRQDHPTVIQVLLESGKD----KDITGHTMPNLIYVSREKSKNSPHHFKAGALNTLLRVSATMTNAPIILTLDCDMYSND 313 (734)
T ss_pred CCCCCCceeeeeccCCCc----cchhhccCCceEEEeCCCCCCCCcccccchHHHHHHhhcccCCCCEEEEecCCcCCCc
Confidence 789999999999988643 2445667999999999999999999999999999999999999999999999999988
Q ss_pred hHHHHHHHHHhcCCCCCcceEEEcccceeccCCccChHHHHHHHHHHHHHHHHhhcCCccccccceEEEcccccccccch
Q 008144 299 PTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHT 378 (576)
Q Consensus 299 pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~AL~~i~~~~ 378 (576)
|++++++||||+||+.+.++|+||+||+|+|++++|+|++++++||+++++|+||++|++||||||++||+||++..+.
T Consensus 314 p~~l~~amcff~Dp~~~~~vafVQfPQ~F~~i~~~D~y~~~~~vff~~~~~glDG~~gp~y~GTGc~~RR~al~G~~~~- 392 (734)
T PLN02893 314 PQTPLRALCYLLDPSMDPKLGYVQFPQIFHGINKNDIYAGELKRLFQINMIGMDGLAGPNYVGTGCFFRRRVFYGGPSS- 392 (734)
T ss_pred hhHHHHHHHHhcCCCcCCceEEEeCcccccCCCcCCCCcchhHHHHHHHhhcccccCCceeeccceEEEHHHhcCCCcc-
Confidence 9999999999999988888999999999999999999999999999999999999999999999999999999986431
Q ss_pred hhhhhhcChhHHHHhHHhhhhcccCC-CCCCchhHHHhhcccccccccccCcccccccccCCCccccHHHHHHHHhcCCe
Q 008144 379 ELKDTFGKSNVLINSLHQSYKQNNAN-GENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWT 457 (576)
Q Consensus 379 ~~~~~fg~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwr 457 (576)
+.++...+.+.+... ....+++++++|++|++|.||++|.||+++||.|+|+|||+.||++||++|||
T Consensus 393 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~sC~ye~~t~WG~~~G~~ygsvtED~~Tg~~lh~~GWr 461 (734)
T PLN02893 393 -----------LILPEIPELNPDHLVDKSIKSQEVLALAHHVAGCNYENQTNWGSKMGFRYGSLVEDYYTGYRLQCEGWK 461 (734)
T ss_pred -----------ccchhhhhcccccccccccchHHHHHHhhhccccccccCCccccccceEeccccccHHHHHHHHhcCCc
Confidence 111111111111111 12457789999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCeeEeecCCCHHHHHHHHHHhhhhhHHHHhhhcCCcccCCCCCCHHHHHHHHhHhHhhHHhHHHHHHHHHHH
Q 008144 458 STYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLP 537 (576)
Q Consensus 458 s~y~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G~~qv~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~~~~~~~~~~~~P 537 (576)
++|++|+++++.|++|+|+.+++.||+||++|++|++++++||++++.++|++.||++|++.++|+ ++++|.++|+++|
T Consensus 462 SvY~~p~~~af~G~aP~~l~~~l~Q~~RWa~G~lqI~~s~~nPl~~g~~~L~~~Qrl~Y~~~~~~~-~~slp~liY~~~P 540 (734)
T PLN02893 462 SIFCNPKRPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKYSPITFGVKSIGLLMGLGYAHYAFWP-IWSIPITIYAFLP 540 (734)
T ss_pred EEecCCCchhhccCCCCCHHHHHHHHHHHHhhhHHHHhhccCchhhcccCCCHHHHHHHHHHHHHH-HhHHHHHHHHHHH
Confidence 999988778899999999999999999999999999999999999876689999999999999999 9999999999999
Q ss_pred HHHHHcCCCcchhhHHH
Q 008144 538 QLCLLNGISLYPERFVN 554 (576)
Q Consensus 538 ~~~ll~g~~~~p~~~~~ 554 (576)
++||++|+++||+....
T Consensus 541 ~l~Ll~g~~i~p~~s~~ 557 (734)
T PLN02893 541 QLALLNGVSIFPKASDP 557 (734)
T ss_pred HHHHHcCCcccccccHH
Confidence 99999999999976444
No 10
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=100.00 E-value=3.9e-123 Score=1025.73 Aligned_cols=459 Identities=46% Similarity=0.831 Sum_probs=426.4
Q ss_pred eEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCccccc
Q 008144 97 IDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYF 176 (576)
Q Consensus 97 VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf 176 (576)
|||||||.||+||||.+++|||+|+|++|||.+||+|||+|||+++.|+++|.||++||+.||||||||+|||||||+||
T Consensus 1 vDvFv~TaDP~~EPp~~~~nTvLS~lA~dYP~~kls~YvSDDg~s~ltf~al~Ea~~FA~~WvPFCkk~~ie~R~P~~YF 80 (720)
T PF03552_consen 1 VDVFVCTADPEKEPPLVTANTVLSILAYDYPVEKLSCYVSDDGGSMLTFYALMEAAKFAKHWVPFCKKYNIEPRAPEAYF 80 (720)
T ss_pred CceEEecCCCCcCCCeeeHHHHHHHHhhcCCccceeEEEecCCchHHHHHHHHHHHHHHhhhcchhhccCCccCCHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccC-CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-------CC---------CCCCCCCccceehhhcccCcchh
Q 008144 177 SEA-DSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVED-------GE---------YGNSQNHSTIIEIIQETFGESET 239 (576)
Q Consensus 177 ~~~-~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~-------g~---------~~~~~~~p~~i~~~~~~~~~~~~ 239 (576)
+.+ +..++..+++|++||++||++||+||+|||.+.++ ++ +++++|||++|||+++++++
T Consensus 81 ~~~~~~~~~~~~~~f~~e~~~~k~~ye~~k~ri~~~~~~~~~~~~~~~~~~~~~~w~~~~~~dH~~iiqv~~~~~~~--- 157 (720)
T PF03552_consen 81 SSKIDPLKDKVQPEFVKERRAMKREYEEFKVRIEALVAKIQKVPEEGWTMQDGTPWPGNTRRDHPGIIQVLLDNPGG--- 157 (720)
T ss_pred ccCCCcccCCcChhHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccceeccCCCcCCCCCCcCChhheEeeccCCCC---
Confidence 997 55666788999999999999999999999986432 22 57899999999999988654
Q ss_pred hhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCcceE
Q 008144 240 IRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLA 319 (576)
Q Consensus 240 ~~~~~~~~~P~l~yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~~g~~vg 319 (576)
.|..+.++|+|+||+|||||+++||+||||||+++|+|+.|+|+|||+++||||+.|||++++++||||+||+.|+.+|
T Consensus 158 -~~~~g~~lP~lvYvsREKrp~~~Hh~KAGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~~d~~~g~~~~ 236 (720)
T PF03552_consen 158 -KDVDGNELPMLVYVSREKRPGYPHHFKAGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFFMDPKIGKKIA 236 (720)
T ss_pred -cccccCcCCeEEEEeccCCCCCCchhhhcccccccccceeecCCCEEEEecccccccchHHHHHHHHhhccCCCCCeeE
Confidence 3567888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccceeccCCccChHHHHHHHHHHHHHHHHhhcCCccccccceEEEcccccccccc----------------------
Q 008144 320 FVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTH---------------------- 377 (576)
Q Consensus 320 ~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~AL~~i~~~---------------------- 377 (576)
|||+||+|+|++++|+|+|+.++||+++++|+||++||+|+||||+|||+||++.+|+
T Consensus 237 ~vQfpq~f~~i~~~d~y~~~~~~~~~~~~~g~dG~~gp~y~Gtgc~~rR~al~g~~~~~~~~~~~~~~~~~~~c~~~~k~ 316 (720)
T PF03552_consen 237 FVQFPQRFDGIDKNDRYGNQNRVFFDINMRGLDGLQGPFYVGTGCFFRREALYGFDPPRYEKDPEKTCCCCSCCFGRRKK 316 (720)
T ss_pred EEeCCceeCCCCcCCCCCccceeeeeccccccccCCCceeeecCcceechhhhCCCCCchhcccCcceeeeecccCCccc
Confidence 9999999999999999999999999999999999999999999999999999998875
Q ss_pred --------------------------------------------hhhhhhhcChhHHHHhHHhhhhcccCCCCCCchhHH
Q 008144 378 --------------------------------------------TELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQ 413 (576)
Q Consensus 378 --------------------------------------------~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (576)
++++++||+|++||+|+..+.++. ..+..+.+++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~~~--~~~~~~~~~L 394 (720)
T PF03552_consen 317 KKSKKKPKKRASKRRESSSPIFALEDIEEGAEGSDEERSSLMSQKELEKKFGQSPEFIASTLMAQGGV--PRSPSPASLL 394 (720)
T ss_pred ccccccchhccccccccccccccccccccccccchhhhhhcchhHHHHHHhcCCHHHHHHHHHHhcCC--CCCCChHHHH
Confidence 135588999999999998654322 2246678999
Q ss_pred HhhcccccccccccCcccccccccCCCccccHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHHHHHHHhhhhhHHH
Q 008144 414 EETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDV 493 (576)
Q Consensus 414 ~~a~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G~~qv 493 (576)
++|++|+||+||++|.||+++||.|+|+|||+.||++||++||||+||.|++++|.|.||+|+.+.+.|++||+.|.+|+
T Consensus 395 ~EA~~V~sC~YE~~T~WGkevGwiYGSvtEDv~TG~rmH~rGWrSvYc~p~r~AF~G~AP~nL~d~L~Q~~RWA~GslEI 474 (720)
T PF03552_consen 395 EEAIHVASCGYEDKTEWGKEVGWIYGSVTEDVLTGFRMHCRGWRSVYCNPKRPAFLGSAPINLSDRLHQVKRWATGSLEI 474 (720)
T ss_pred HHHHHHhcCCccccCCcccccceEEEecccccccceeEeeCceeeEEeccccchhcccCCCChhhhceeeeeEeeeeEee
Confidence 99999999999999999999999999999999999999999999999999889999999999999999999999999999
Q ss_pred HhhhcCCcccC-CCCCCHHHHHHHHhHhHhhHHhHHHHHHHHHHHHHHHHcCCCcchhhHHHHHHhhhhH
Q 008144 494 GLSRFCPLLYG-PSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPERFVNTCKRSFPL 562 (576)
Q Consensus 494 ~~~~~~p~~~~-~~~l~~~qrl~y~~~~~~~~~~~~~~~~~~~~P~~~ll~g~~~~p~~~~~~~~~~~~~ 562 (576)
+++|+||++++ +++|+++||++|++.++|+ ++|+|.++|+++|++||++|+++||+.......+.+++
T Consensus 475 ~fSr~~Pl~~g~~~rL~~lQrLaY~~~~~yp-l~Sipll~Y~~lPalcLLtG~~i~Pk~s~~~~~~f~~l 543 (720)
T PF03552_consen 475 FFSRHCPLWYGYGGRLKFLQRLAYLNYMLYP-LTSIPLLCYCFLPALCLLTGIFIFPKVSSPWFIYFLAL 543 (720)
T ss_pred ehhcCCchhccCCCCCcHHHHHHHHHHhhhH-HHHHHHHHHHHhHHHHhhCCCcccCccccchhHHHHHH
Confidence 99999999998 5799999999999999999 99999999999999999999999999754444444433
No 11
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=100.00 E-value=1.3e-60 Score=546.31 Aligned_cols=387 Identities=28% Similarity=0.386 Sum_probs=322.7
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCce
Q 008144 19 INRLHALLHCIA-IGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAI 97 (576)
Q Consensus 19 ~~r~~~~~~~~~-~~~yl~~R~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~~~~~P~V 97 (576)
+.|++.++..++ .+.|++||++.+++..+.....++++++++|++..+..+++.+..++|..|...+.. ..++.+|+|
T Consensus 55 ~~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~l~~~e~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~P~V 133 (713)
T TIGR03030 55 RPRLLLLVLSVFISLRYLWWRLTETLPFDNTLNFIFGTLLLLAELYSITILLLGYFQTVRPLDRTPVPLP-LDPEEWPTV 133 (713)
T ss_pred hHHHHHHHHHHHHHHHHHHhheeeecCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCccCCC-CCcccCCee
Confidence 447666655555 589999999999997666666677788999999998888888888788777643322 124678999
Q ss_pred EEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCcccccc
Q 008144 98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177 (576)
Q Consensus 98 dV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 177 (576)
||+||+|| |+++++++|+.+++++|||.++++|+|+||||+|.|.....++++
T Consensus 134 sViIP~yN---E~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~------------------------ 186 (713)
T TIGR03030 134 DVFIPTYN---EDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQA------------------------ 186 (713)
T ss_pred EEEEcCCC---CCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhhh------------------------
Confidence 99999999 887888999999999999999999999999999988532211110
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEEEecc
Q 008144 178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSRE 257 (576)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv~Re 257 (576)
+..+.+..+++..++ .++.|+.|+
T Consensus 187 -----------~~~~~~~~~~~l~~~---------------------------------------------~~v~yi~r~ 210 (713)
T TIGR03030 187 -----------EAAQRREELKEFCRK---------------------------------------------LGVNYITRP 210 (713)
T ss_pred -----------hhhhhHHHHHHHHHH---------------------------------------------cCcEEEECC
Confidence 000111222222211 147899987
Q ss_pred CCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc-CCCCCcceEEEcccceeccCCcc---
Q 008144 258 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNINKY--- 333 (576)
Q Consensus 258 krpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~-Dp~~g~~vg~VQ~pq~f~n~~~~--- 333 (576)
+ |.|+||||+|+|+++ ++||||+++|||+++. ||+|++++++|. ||+ +|+||+||.|+|.+.-
T Consensus 211 ~----n~~~KAgnLN~al~~----a~gd~Il~lDAD~v~~-pd~L~~~v~~f~~dp~----v~~Vqtp~~f~~p~~~~~n 277 (713)
T TIGR03030 211 R----NVHAKAGNINNALKH----TDGELILIFDADHVPT-RDFLQRTVGWFVEDPK----LFLVQTPHFFVSPDPIERN 277 (713)
T ss_pred C----CCCCChHHHHHHHHh----cCCCEEEEECCCCCcC-hhHHHHHHHHHHhCCC----EEEEeCCeeccCCCHHhhh
Confidence 6 468999999999999 8999999999999997 999999999995 887 8999999999875421
Q ss_pred ----ChHHHHHHHHHHHHHHHHhhcCCccccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCCCCCc
Q 008144 334 ----DIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFS 409 (576)
Q Consensus 334 ----d~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~ 409 (576)
+...++...||..++.|.+.++++++||+|+++||++++++
T Consensus 278 l~~~~~~~~e~~~f~~~i~~g~~~~~~~~~~Gs~~~iRR~al~~i----------------------------------- 322 (713)
T TIGR03030 278 LGTFRRMPNENELFYGLIQDGNDFWNAAFFCGSAAVLRREALDEI----------------------------------- 322 (713)
T ss_pred hHHHHHhhhHHHHHHHHHHHHHhhhCCeeecCceeEEEHHHHHHc-----------------------------------
Confidence 12234556788899999999999999999999999999876
Q ss_pred hhHHHhhcccccccccccCcccccccccCCCccccHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHHHHHHHhhhh
Q 008144 410 NVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSG 489 (576)
Q Consensus 410 ~~~~~~a~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G 489 (576)
|||++++++||++++++|+++||+++|++ ++.++|++|+|++++++||.||++|
T Consensus 323 ------------------------GGf~~~~vtED~~l~~rL~~~G~~~~y~~--~~~~~g~~p~sl~~~~~Qr~RWa~G 376 (713)
T TIGR03030 323 ------------------------GGIAGETVTEDAETALKLHRRGWNSAYLD--RPLIAGLAPETLSGHIGQRIRWAQG 376 (713)
T ss_pred ------------------------CCCCCCCcCcHHHHHHHHHHcCCeEEEec--cccccccCCCCHHHHHHHHHHHhcC
Confidence 68999999999999999999999999998 5899999999999999999999999
Q ss_pred hHHHHhhhcCCcccCCCCCCHHHHHHHHhHhHhhHHhHHHHHHHHHHHHHHHHcCCCcchhhHHHHHHhhhhHHHHHh
Q 008144 490 LTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPERFVNTCKRSFPLEVQSM 567 (576)
Q Consensus 490 ~~qv~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~~~~~~~~~~~~P~~~ll~g~~~~p~~~~~~~~~~~~~~~~~~ 567 (576)
++|+++. .+|++.+ ++++.||++|+++.+|+ +.+++.++|+++|++++++|+++++..+..++.|.+|+.+.++
T Consensus 377 ~~qi~~~-~~pl~~~--gl~~~qrl~y~~~~~~~-~~~~~~~~~~~~P~~~l~~~~~~~~~~~~~~~~~~lp~~~~~~ 450 (713)
T TIGR03030 377 MMQIFRL-DNPLLKR--GLSFPQRLCYLNAMLFW-FFPLPRVIFLTAPLAYLFFGLNIFVASALEILAYALPHMLHSL 450 (713)
T ss_pred hHHHHhh-hCccccC--CCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCcceeCCHHHHHHHHHHHHHHHH
Confidence 9999885 4898864 69999999999999999 8999999999999999999999999999999999999998876
No 12
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=100.00 E-value=5.1e-60 Score=541.62 Aligned_cols=367 Identities=25% Similarity=0.369 Sum_probs=313.4
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCC-CCCCCc
Q 008144 19 INRLH-ALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPE-DDKLPA 96 (576)
Q Consensus 19 ~~r~~-~~~~~~~~~~yl~~R~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~-~~~~P~ 96 (576)
+.|++ +++.+++.++|++||++.+++..+..+..+.++++++|++..+..+++.+..+.|..|++. .++. .+.+|+
T Consensus 184 ~~~~~l~~l~~~~~~rY~~WR~~~tL~~~~~~~~~~~~~ll~ae~~~~~~~~lg~~~~~~~~~r~~~--~~~~~~~~~P~ 261 (852)
T PRK11498 184 FSALMLIVLSLTVSCRYIWWRYTSTLNWDDPVSLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQPV--PLPKDMSLWPT 261 (852)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHheeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCC--CCCcccCCCCc
Confidence 44544 4455555789999999999997666677788888999999998888888877778777532 2333 356899
Q ss_pred eEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCccccc
Q 008144 97 IDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYF 176 (576)
Q Consensus 97 VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf 176 (576)
|||+||||| |+.+++++||.+++++|||.++++|||+|||++|.|.+ +|+++
T Consensus 262 VsViIPtYN---E~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t~~--------------la~~~----------- 313 (852)
T PRK11498 262 VDIFVPTYN---EDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEFRQ--------------FAQEV----------- 313 (852)
T ss_pred EEEEEecCC---CcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHHHH--------------HHHHC-----------
Confidence 999999999 88789999999999999999999999999999996521 11111
Q ss_pred ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEEEec
Q 008144 177 SEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSR 256 (576)
Q Consensus 177 ~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv~R 256 (576)
++.|+.|
T Consensus 314 -------------------------------------------------------------------------~v~yI~R 320 (852)
T PRK11498 314 -------------------------------------------------------------------------GVKYIAR 320 (852)
T ss_pred -------------------------------------------------------------------------CcEEEEe
Confidence 3688888
Q ss_pred cCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHh-cCCCCCcceEEEcccceeccCCccC-
Q 008144 257 EKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKISSSLAFVQFPQKFHNINKYD- 334 (576)
Q Consensus 257 ekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f-~Dp~~g~~vg~VQ~pq~f~n~~~~d- 334 (576)
++ |.|+||||+|+|++. ++||||+++|||+++. ||+|++++++| .||+ +|+||+||.|+|.+.-.
T Consensus 321 ~~----n~~gKAGnLN~aL~~----a~GEyIavlDAD~ip~-pdfL~~~V~~f~~dP~----VglVQtp~~f~n~dp~~r 387 (852)
T PRK11498 321 PT----HEHAKAGNINNALKY----AKGEFVAIFDCDHVPT-RSFLQMTMGWFLKDKK----LAMMQTPHHFFSPDPFER 387 (852)
T ss_pred CC----CCcchHHHHHHHHHh----CCCCEEEEECCCCCCC-hHHHHHHHHHHHhCCC----eEEEEcceeccCCchHHH
Confidence 76 468999999999999 8999999999999997 99999999876 5998 89999999998753210
Q ss_pred ------hHHHHHHHHHHHHHHHHhhcCCccccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCCCCC
Q 008144 335 ------IYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENF 408 (576)
Q Consensus 335 ------~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~ 408 (576)
...++...||..++.|.+.+++.++||+++++||++++++
T Consensus 388 nl~~~~~~~~e~~~fy~~iq~g~~~~~a~~~~Gs~aviRReaLeeV---------------------------------- 433 (852)
T PRK11498 388 NLGRFRKTPNEGTLFYGLVQDGNDMWDATFFCGSCAVIRRKPLDEI---------------------------------- 433 (852)
T ss_pred hhHHHhhcccchhHHHHHHHhHHHhhcccccccceeeeEHHHHHHh----------------------------------
Confidence 1123445788999999999999999999999999999876
Q ss_pred chhHHHhhcccccccccccCcccccccccCCCccccHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHHHHHHHhhh
Q 008144 409 SNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGS 488 (576)
Q Consensus 409 ~~~~~~~a~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~RWa~ 488 (576)
|||++++++||++++++|+++||+++|++ ++.+.|++|+|++++++||.||++
T Consensus 434 -------------------------GGfd~~titED~dlslRL~~~Gyrv~yl~--~~~a~glaPesl~~~~~QR~RWar 486 (852)
T PRK11498 434 -------------------------GGIAVETVTEDAHTSLRLHRRGYTSAYMR--IPQAAGLATESLSAHIGQRIRWAR 486 (852)
T ss_pred -------------------------cCCCCCccCccHHHHHHHHHcCCEEEEEe--ccceeEECCCCHHHHHHHHHHHHH
Confidence 68999999999999999999999999998 589999999999999999999999
Q ss_pred hhHHHHhhhcCCcccCCCCCCHHHHHHHHhHhHhhHHhHHHHHHHHHHHHHHHHcCCCcchhhHHHHHHhhhhHHHHH
Q 008144 489 GLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPERFVNTCKRSFPLEVQS 566 (576)
Q Consensus 489 G~~qv~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~~~~~~~~~~~~P~~~ll~g~~~~p~~~~~~~~~~~~~~~~~ 566 (576)
|++|+++. ++|++.+ ++++.||++|+++.+++ +.++|.++|+++|++|+++|+.++......++.|.+|+.+.+
T Consensus 487 G~lQi~r~-~~pl~~~--gL~~~qRl~y~~~~l~~-l~g~~~l~~l~~Pl~~l~~gi~~i~a~~~~i~~y~lP~~~~~ 560 (852)
T PRK11498 487 GMVQIFRL-DNPLTGK--GLKLAQRLCYANAMLHF-LSGIPRLIFLTAPLAFLLLHAYIIYAPALMIALFVLPHMIHA 560 (852)
T ss_pred HHHHHHHH-hChhccC--CCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCChheeCChHHHHHHHHHHHHHH
Confidence 99999874 6898754 69999999999988888 999999999999999999999999888888899999998763
No 13
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=100.00 E-value=2.6e-39 Score=366.52 Aligned_cols=343 Identities=16% Similarity=0.124 Sum_probs=240.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHH------HHHHHHHHHHHHHHHHHHhhhccccccCC----CC-
Q 008144 18 IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWL------LVFASELLLSFIWLLGRAYLWRPVSRTVF----PE- 86 (576)
Q Consensus 18 ~~~r~~~~~~~~~~~~yl~~R~~~~~~~~~~~~~~~w~------~~~~~E~~~~~~~~l~~~~~~~p~~r~~~----~~- 86 (576)
.+.|++.++..++...|..|+...+++..+. ...-|. ++|..+.+.+...+++.+...+ .|... +.
T Consensus 39 ~~rr~~~~~~~~~~~~~~~~~~~~~l~~~g~-~~~~~~~l~lf~~~~~w~~~~~~~a~~g~~~~~~--~~~~~~~~~~~~ 115 (691)
T PRK05454 39 TLRRLILLGLTLAQTAVATWEMKAVLPYGGW-TLLEPALLVLFALLFAWISLGFWTALMGFLQLLR--GRDKYSISASAA 115 (691)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCcccCCcccc
Confidence 3778888888888889999999988876432 111111 1223344433333344333221 11111 10
Q ss_pred CCCCCCCCCceEEEEecCCCCCCChH----HHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHH
Q 008144 87 RLPEDDKLPAIDVFICTADPEKEPAI----GVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFC 162 (576)
Q Consensus 87 ~l~~~~~~P~VdV~Iptyn~~~E~~~----~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc 162 (576)
.-+.....|+|+|+||+|| |+++ .++.+++|+.+++||. +++|+|+|||++|.+.. .|
T Consensus 116 ~~~~~~~~~~VaVliP~yN---Ed~~~v~~~L~a~~~Sl~~~~~~~-~~e~~vLdD~~d~~~~~--~e------------ 177 (691)
T PRK05454 116 GDPPPPPEARTAILMPIYN---EDPARVFAGLRAMYESLAATGHGA-HFDFFILSDTRDPDIAA--AE------------ 177 (691)
T ss_pred cCCCCCCCCceEEEEeCCC---CChHHHHHHHHHHHHHHHhcCCCC-CEEEEEEECCCChhHHH--HH------------
Confidence 0111245799999999999 7765 4666677777899985 79999999999996632 11
Q ss_pred HhhCCccCCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhh
Q 008144 163 RRYGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQ 242 (576)
Q Consensus 163 ~~~~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~ 242 (576)
++ .+++++.+.
T Consensus 178 -------------------------------~~----~~~~L~~~~---------------------------------- 188 (691)
T PRK05454 178 -------------------------------EA----AWLELRAEL---------------------------------- 188 (691)
T ss_pred -------------------------------HH----HHHHHHHhc----------------------------------
Confidence 00 122221110
Q ss_pred ccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc-CCCCCcceEEE
Q 008144 243 ADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFV 321 (576)
Q Consensus 243 ~~~~~~P~l~yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~-Dp~~g~~vg~V 321 (576)
...+++.|.+|++ |.++||||+|.+++..+ .++|||+++|||++++ +|+|++++.+|. ||+ +|+|
T Consensus 189 ---~~~~~i~yr~R~~----n~~~KaGNl~~~~~~~~--~~~eyivvLDADs~m~-~d~L~~lv~~m~~dP~----vGlV 254 (691)
T PRK05454 189 ---GGEGRIFYRRRRR----NVGRKAGNIADFCRRWG--GAYDYMVVLDADSLMS-GDTLVRLVRLMEANPR----AGLI 254 (691)
T ss_pred ---CCCCcEEEEECCc----CCCccHHHHHHHHHhcC--CCcCEEEEEcCCCCCC-HHHHHHHHHHHhhCcC----EEEE
Confidence 0013688888876 45789999999999966 6789999999999998 999999999986 998 8999
Q ss_pred cccceeccCCccChHHHHH----HHHHHHHHHHHhhcCC--ccccccceEEEcccccccccchhhhhhhcChhHHHHhHH
Q 008144 322 QFPQKFHNINKYDIYDGRF----RSAYCVQWQGMDGLKG--PVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLH 395 (576)
Q Consensus 322 Q~pq~f~n~~~~d~~~~~~----~~f~~~~~~g~d~~~g--~~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~ 395 (576)
|+++.+.|.+ ..+..-+ .++......|.+.|++ ..|+|+|+++||+|+.+++.-.++
T Consensus 255 Qt~~~~~n~~--slfaR~qqf~~~~y~~~~~~G~~~w~~~~g~f~G~naIiR~~af~~~~glp~L--------------- 317 (691)
T PRK05454 255 QTLPVAVGAD--TLFARLQQFATRVYGPLFAAGLAWWQGGEGNYWGHNAIIRVKAFAEHCGLPPL--------------- 317 (691)
T ss_pred eCCccCcCCC--CHHHHHHHHHHHHHHHHHHhhhhhhccCccccccceEEEEHHHHHHhcCCccc---------------
Confidence 9999988753 3444332 2334445677776653 468999999999999765310000
Q ss_pred hhhhcccCCCCCCchhHHHhhcccccccccccCcccccccccCCCccccHHHHHHHHhcCCeEEEeCCCCCeeEeecCCC
Q 008144 396 QSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTN 475 (576)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~t 475 (576)
...+||..++++||++++.+|+++||+++|++. -+.+++++|+|
T Consensus 318 -----------------------------------~g~~p~~~~~LseD~~~a~~l~~~GyrV~~~pd-~~~~~ee~P~t 361 (691)
T PRK05454 318 -----------------------------------PGRGPFGGHILSHDFVEAALMRRAGWGVWLAPD-LPGSYEELPPN 361 (691)
T ss_pred -----------------------------------cccCCCCCCcccHHHHHHHHHHHCCCEEEEcCc-cccccccCCCC
Confidence 002579999999999999999999999999983 15789999999
Q ss_pred HHHHHHHHHHhhhhhHHHHhhhcCCcccCCCCCCHHHHHHHHhHhHhh
Q 008144 476 LNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFP 523 (576)
Q Consensus 476 l~~~l~Qr~RWa~G~~qv~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~ 523 (576)
++++++||.||++|++|++.. +.. +++++.+|++|+...+.+
T Consensus 362 l~~~~~qr~RW~~G~lQ~l~~----l~~--~gl~~~~R~~~l~g~~~y 403 (691)
T PRK05454 362 LLDELKRDRRWCQGNLQHLRL----LLA--KGLHPVSRLHFLTGIMSY 403 (691)
T ss_pred HHHHHHHHHHHHhchHHHHHH----HHh--cCCCHHHHHHHHHHHHHH
Confidence 999999999999999998763 222 358999999887654444
No 14
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=100.00 E-value=4e-38 Score=343.24 Aligned_cols=290 Identities=20% Similarity=0.227 Sum_probs=212.2
Q ss_pred HHHHHHHHHHHHHHHHhhhcccccc-CC--CCCCCCCCCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEE
Q 008144 58 FASELLLSFIWLLGRAYLWRPVSRT-VF--PERLPEDDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVY 134 (576)
Q Consensus 58 ~~~E~~~~~~~~l~~~~~~~p~~r~-~~--~~~l~~~~~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~ 134 (576)
++.-+++++.|++..+..|.-..|. +. ++..+..+..|.|+|+||+|| |+ ..+.+||.|+++++||. ++|+
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~vsViIP~yN---E~-~~i~~~l~sll~q~yp~--~eIi 108 (444)
T PRK14583 35 FFYPLFMSGIWITGGVYFWLRRERHWPWGDDVPAPELKGHPLVSILVPCFN---EG-LNARETIHAALAQTYTN--IEVI 108 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccccCCCCCCcCCCCcEEEEEEeCC---CH-HHHHHHHHHHHcCCCCC--eEEE
Confidence 4455666666776655433211111 11 112222345799999999999 66 47899999999999995 9999
Q ss_pred EEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc
Q 008144 135 LSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVED 214 (576)
Q Consensus 135 V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~ 214 (576)
|+|||++|.|.+.+.+.++
T Consensus 109 vVdDgs~D~t~~~~~~~~~------------------------------------------------------------- 127 (444)
T PRK14583 109 AINDGSSDDTAQVLDALLA------------------------------------------------------------- 127 (444)
T ss_pred EEECCCCccHHHHHHHHHH-------------------------------------------------------------
Confidence 9999999988654432110
Q ss_pred CCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCC
Q 008144 215 GEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDM 294 (576)
Q Consensus 215 g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~ 294 (576)
+.|++.++.+++ ++||++|+|.|++. +++|+++++|||+
T Consensus 128 --------------------------------~~~~v~vv~~~~-----n~Gka~AlN~gl~~----a~~d~iv~lDAD~ 166 (444)
T PRK14583 128 --------------------------------EDPRLRVIHLAH-----NQGKAIALRMGAAA----ARSEYLVCIDGDA 166 (444)
T ss_pred --------------------------------hCCCEEEEEeCC-----CCCHHHHHHHHHHh----CCCCEEEEECCCC
Confidence 013466666543 36799999999999 8999999999999
Q ss_pred CCCchHHHHHHHHHhc-CCCCCcceEEEcccceeccCCccChHHH----HHHHHHHHHHHHHhhcCCcc-ccccceEEEc
Q 008144 295 YCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNINKYDIYDG----RFRSAYCVQWQGMDGLKGPV-LSGTGYYIKR 368 (576)
Q Consensus 295 ~~~~pd~L~~~v~~f~-Dp~~g~~vg~VQ~pq~f~n~~~~d~~~~----~~~~f~~~~~~g~d~~~g~~-~~Gtg~~~RR 368 (576)
+++ ||++++++..|. ||+ +|.||+.....|. +..++. +...++..+.++....+..+ .+|+++++||
T Consensus 167 ~~~-~d~L~~lv~~~~~~~~----~g~v~g~~~~~~~--~~~~~~~~~~e~~~~~~~~~~~~~~~g~~~~~sG~~~~~rr 239 (444)
T PRK14583 167 LLD-KNAVPYLVAPLIANPR----TGAVTGNPRIRTR--STLIGRVQVGEFSSIIGLIKRTQRVYGQVFTVSGVVAAFRR 239 (444)
T ss_pred CcC-HHHHHHHHHHHHhCCC----eEEEEccceecCC--CcchhhHHHHHHHHHHHHHHHHHHHhCCceEecCceeEEEH
Confidence 997 999999998876 776 7899998776653 233322 22333445555666666554 5788899999
Q ss_pred ccccccccchhhhhhhcChhHHHHhHHhhhhcccCCCCCCchhHHHhhcccccccccccCcccccccccCCCccccHHHH
Q 008144 369 ESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTG 448 (576)
Q Consensus 369 ~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~ 448 (576)
+++.++ |||+.+.++||++++
T Consensus 240 ~al~~v-----------------------------------------------------------Gg~~~~~i~ED~dl~ 260 (444)
T PRK14583 240 RALADV-----------------------------------------------------------GYWSPDMITEDIDIS 260 (444)
T ss_pred HHHHHc-----------------------------------------------------------CCCCCCcccccHHHH
Confidence 999865 689999999999999
Q ss_pred HHHHhcCCeEEEeCCCCCeeEeecCCCHHHHHHHHHHhhhhhHHHHhhhcCCcccCCCCCCHHHHHHHHhHhHhh
Q 008144 449 FILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFP 523 (576)
Q Consensus 449 ~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G~~qv~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~ 523 (576)
++|+.+||++.|++ ++.+++++|+|++++++||.||++|.+|+++.+...++....+..+.+-+.|+.+.+|.
T Consensus 261 ~rl~~~G~~i~~~p--~a~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (444)
T PRK14583 261 WKLQLKHWSVFFEP--RGLCWILMPETLRGLWKQRLRWAQGGAEVFLKNMFKLWRWRNRRMWLLFLEYSLSITWA 333 (444)
T ss_pred HHHHHcCCeEEEee--ccEEeeeCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHhCcccccHHHHHHHHHHHHHHH
Confidence 99999999999998 68999999999999999999999999999986543333221122234445666655665
No 15
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=1.1e-37 Score=335.93 Aligned_cols=234 Identities=26% Similarity=0.328 Sum_probs=185.2
Q ss_pred CCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCcc
Q 008144 94 LPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQ 173 (576)
Q Consensus 94 ~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~ 173 (576)
.|.|||+||+|| |+++++++|+.|++++|||. ++|+|+|||++|.|.+.+.| ++.+
T Consensus 53 ~p~vsviiP~yn---E~~~~~~~~l~s~~~~dyp~--~evivv~d~~~d~~~~~~~~--------------~~~~----- 108 (439)
T COG1215 53 LPKVSVIIPAYN---EEPEVLEETLESLLSQDYPR--YEVIVVDDGSTDETYEILEE--------------LGAE----- 108 (439)
T ss_pred CCceEEEEecCC---CchhhHHHHHHHHHhCCCCC--ceEEEECCCCChhHHHHHHH--------------HHhh-----
Confidence 599999999999 88789999999999999998 99999999999987653332 1110
Q ss_pred cccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEE
Q 008144 174 AYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVY 253 (576)
Q Consensus 174 ~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~y 253 (576)
+ + |+++.
T Consensus 109 ---------------------------~----------------------~------------------------~~~~~ 115 (439)
T COG1215 109 ---------------------------Y----------------------G------------------------PNFRV 115 (439)
T ss_pred ---------------------------c----------------------C------------------------cceEE
Confidence 0 0 12232
Q ss_pred EeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCcceEEEcccceeccCCcc
Q 008144 254 VSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKY 333 (576)
Q Consensus 254 v~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~ 333 (576)
+..++ +++||++|+|.++.. +++|+|+++|||++++ ||+|++++.+|.|+.. .|.+|.|+.+.+....
T Consensus 116 ~~~~~----~~~gK~~al~~~l~~----~~~d~V~~~DaD~~~~-~d~l~~~~~~f~~~~~---~~v~~~~~~~~~~~~~ 183 (439)
T COG1215 116 IYPEK----KNGGKAGALNNGLKR----AKGDVVVILDADTVPE-PDALRELVSPFEDPPV---GAVVGTPRIRNRPDPS 183 (439)
T ss_pred Eeccc----cCccchHHHHHHHhh----cCCCEEEEEcCCCCCC-hhHHHHHHhhhcCCCe---eEEeCCceeeecCChh
Confidence 31112 468999999999999 8899999999999998 9999999999998874 3789999887764221
Q ss_pred ChHHHHHHHHHHHHH----H-HHhhcCCccccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCCCCC
Q 008144 334 DIYDGRFRSAYCVQW----Q-GMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENF 408 (576)
Q Consensus 334 d~~~~~~~~f~~~~~----~-g~d~~~g~~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~ 408 (576)
..+...+...|.... + +.+.....+++|+++++||++|.++
T Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~G~~~~~rr~aL~~~---------------------------------- 229 (439)
T COG1215 184 NLLGRIQAIEYLSAFYFRLRAASKGGLISFLSGSSSAFRRSALEEV---------------------------------- 229 (439)
T ss_pred hhcchhcchhhhhhHHHhhhhhhhcCCeEEEcceeeeEEHHHHHHh----------------------------------
Confidence 222222222222222 2 2222234578999999999999865
Q ss_pred chhHHHhhcccccccccccCcccccccccCCCccccHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHHHHHHHhhh
Q 008144 409 SNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGS 488 (576)
Q Consensus 409 ~~~~~~~a~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~RWa~ 488 (576)
+||..+++|||.+++++++.+|||+.|++ ++.+++++|+|++++++||.||++
T Consensus 230 -------------------------g~~~~~~i~ED~~lt~~l~~~G~~~~~~~--~~~~~~~~p~t~~~~~~Qr~RW~~ 282 (439)
T COG1215 230 -------------------------GGWLEDTITEDADLTLRLHLRGYRVVYVP--EAIVWTEAPETLKELWRQRLRWAR 282 (439)
T ss_pred -------------------------CCCCCCceeccHHHHHHHHHCCCeEEEee--cceEeeeCcccHHHHHHHHHHHHc
Confidence 57999999999999999999999999998 589999999999999999999999
Q ss_pred hhHHHHhhh
Q 008144 489 GLTDVGLSR 497 (576)
Q Consensus 489 G~~qv~~~~ 497 (576)
|.+|++..+
T Consensus 283 g~~~~~~~~ 291 (439)
T COG1215 283 GGLQVLLLH 291 (439)
T ss_pred ccceeeehh
Confidence 999999753
No 16
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=100.00 E-value=1.2e-37 Score=316.11 Aligned_cols=241 Identities=15% Similarity=0.183 Sum_probs=184.5
Q ss_pred eEEEEecCCCCCCChHHHHHHHHHHHc----CCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCc
Q 008144 97 IDVFICTADPEKEPAIGVMNTVLSAMA----LDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (576)
Q Consensus 97 VdV~Iptyn~~~E~~~~v~~Tv~s~~~----ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p 172 (576)
|+|+||+|| |+++++.+||.+.+. ++|+. +++|+|+|||+++... ..
T Consensus 1 ~SIliP~~n---e~~~~l~~~l~~~~~~~~~~~~~~-~~eI~vldD~~d~~~~--~~----------------------- 51 (254)
T cd04191 1 TAIVMPVYN---EDPARVFAGLRAMYESLAKTGLAD-HFDFFILSDTRDPDIW--LA----------------------- 51 (254)
T ss_pred CEEEEeCCC---CCHHHHHHHHHHHHHHHHhcCCcC-ceEEEEECCCCChHHH--HH-----------------------
Confidence 789999999 998889999999875 67632 4999999999987321 01
Q ss_pred ccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEE
Q 008144 173 QAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLV 252 (576)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~ 252 (576)
|+..+.++.+++ ...++++
T Consensus 52 --------------------~~~~~~~l~~~~-----------------------------------------~~~~~v~ 70 (254)
T cd04191 52 --------------------EEAAWLDLCEEL-----------------------------------------GAQGRIY 70 (254)
T ss_pred --------------------HHHHHHHHHHHh-----------------------------------------CCCCcEE
Confidence 111111111111 0124799
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc-CCCCCcceEEEcccceeccCC
Q 008144 253 YVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNIN 331 (576)
Q Consensus 253 yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~-Dp~~g~~vg~VQ~pq~f~n~~ 331 (576)
|+.|+++ .|.||||||.++...+ +++|||+++|||++++ ||+|.+++.+|. ||+ +|+||+|+.+.|.+
T Consensus 71 ~~~r~~~----~g~Kag~l~~~~~~~~--~~~~~i~~~DaD~~~~-p~~l~~~v~~~~~~~~----vg~vq~~~~~~n~~ 139 (254)
T cd04191 71 YRRRREN----TGRKAGNIADFCRRWG--SRYDYMVVLDADSLMS-GDTIVRLVRRMEANPR----AGIIQTAPKLIGAE 139 (254)
T ss_pred EEEcCCC----CCccHHHHHHHHHHhC--CCCCEEEEEeCCCCCC-HHHHHHHHHHHHhCCC----EEEEeCCceeECCC
Confidence 9999874 5789999999998744 6889999999999998 999999999996 998 89999999998863
Q ss_pred ccChHHHHH----HHHHHHHHHHHhhcCC--ccccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCC
Q 008144 332 KYDIYDGRF----RSAYCVQWQGMDGLKG--PVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANG 405 (576)
Q Consensus 332 ~~d~~~~~~----~~f~~~~~~g~d~~~g--~~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~ 405 (576)
..+.+-+ ..|...++.|++.|++ .+++|+++++||++|+.++.
T Consensus 140 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~~~~----------------------------- 188 (254)
T cd04191 140 --TLFARLQQFANRLYGPVFGRGLAAWQGGEGNYWGHNAIIRVAAFMEHCA----------------------------- 188 (254)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccceEEEEEHHHHHHhcC-----------------------------
Confidence 2233222 3444556677776643 47899999999999976421
Q ss_pred CCCchhHHHhhcccccccccccCcccccccccCCCccccHHHHHHHHhcCCeEEEeCCCCCe-eEeecCCCHHHHHHHHH
Q 008144 406 ENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQ-FLGTSTTNLNDLLIQGT 484 (576)
Q Consensus 406 ~~~~~~~~~~a~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~-~~g~aP~tl~~~l~Qr~ 484 (576)
.+ ..|.-+||..++++||+++|++++++||+++|.+ ++. +++++|+|++++++||.
T Consensus 189 ------------------~~---~i~g~g~~~~~~l~eD~~l~~~~~~~G~ri~~~~--~~~~~~~~~p~~~~~~~~qr~ 245 (254)
T cd04191 189 ------------------LP---VLPGRPPFGGHILSHDFVEAALMRRAGWEVRLAP--DLEGSYEECPPTLIDFLKRDR 245 (254)
T ss_pred ------------------Cc---cccCCCCCCCCeecHHHHHHHHHHHcCCEEEEcc--CCcceEeECCCCHHHHHHHHH
Confidence 00 0111257988999999999999999999999997 354 68999999999999999
Q ss_pred HhhhhhHH
Q 008144 485 RWGSGLTD 492 (576)
Q Consensus 485 RWa~G~~q 492 (576)
||++|++|
T Consensus 246 RW~~G~~q 253 (254)
T cd04191 246 RWCQGNLQ 253 (254)
T ss_pred HHHhhcCc
Confidence 99999987
No 17
>PRK11204 N-glycosyltransferase; Provisional
Probab=100.00 E-value=7e-36 Score=322.19 Aligned_cols=232 Identities=21% Similarity=0.251 Sum_probs=185.0
Q ss_pred CCCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccC
Q 008144 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI 170 (576)
Q Consensus 91 ~~~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r 170 (576)
.+..|.|+|+||+|| |+ +.+.+|+.|+++++||. ++|+|+|||++|.|.+.+.+.+
T Consensus 50 ~~~~p~vsViIp~yn---e~-~~i~~~l~sl~~q~yp~--~eiiVvdD~s~d~t~~~l~~~~------------------ 105 (420)
T PRK11204 50 LKEYPGVSILVPCYN---EG-ENVEETISHLLALRYPN--YEVIAINDGSSDNTGEILDRLA------------------ 105 (420)
T ss_pred cCCCCCEEEEEecCC---CH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCccHHHHHHHHH------------------
Confidence 356799999999999 65 58999999999999995 9999999999998764332211
Q ss_pred CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCc
Q 008144 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPL 250 (576)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~ 250 (576)
...|+
T Consensus 106 ---------------------------------------------------------------------------~~~~~ 110 (420)
T PRK11204 106 ---------------------------------------------------------------------------AQIPR 110 (420)
T ss_pred ---------------------------------------------------------------------------HhCCc
Confidence 01245
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc-CCCCCcceEEEcccceecc
Q 008144 251 LVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHN 329 (576)
Q Consensus 251 l~yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~-Dp~~g~~vg~VQ~pq~f~n 329 (576)
+.++.+++ +.||++|+|.|++. +++|+++++|||++++ ||+|.+++..|. ||+ ++.||+.....|
T Consensus 111 v~~i~~~~-----n~Gka~aln~g~~~----a~~d~i~~lDaD~~~~-~d~L~~l~~~~~~~~~----v~~v~g~~~~~~ 176 (420)
T PRK11204 111 LRVIHLAE-----NQGKANALNTGAAA----ARSEYLVCIDGDALLD-PDAAAYMVEHFLHNPR----VGAVTGNPRIRN 176 (420)
T ss_pred EEEEEcCC-----CCCHHHHHHHHHHH----cCCCEEEEECCCCCCC-hhHHHHHHHHHHhCCC----eEEEECCceecc
Confidence 77777554 36799999999999 8999999999999997 999999999995 887 789998877665
Q ss_pred CCccChHHHHHHH----HHHHHHHHHhhcCCcc-ccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCC
Q 008144 330 INKYDIYDGRFRS----AYCVQWQGMDGLKGPV-LSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNAN 404 (576)
Q Consensus 330 ~~~~d~~~~~~~~----f~~~~~~g~d~~~g~~-~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~ 404 (576)
. ....+..+.. .+.....+....+... .+|+++++||+++.++
T Consensus 177 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~v------------------------------ 224 (420)
T PRK11204 177 R--STLLGRIQVGEFSSIIGLIKRAQRVYGRVFTVSGVITAFRKSALHEV------------------------------ 224 (420)
T ss_pred c--hhHHHHHHHHHHHHhhhHHHHHHHHhCCceEecceeeeeeHHHHHHh------------------------------
Confidence 3 2223222221 2222333333334333 4688899999999765
Q ss_pred CCCCchhHHHhhcccccccccccCcccccccccCCCccccHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHHHHHH
Q 008144 405 GENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGT 484 (576)
Q Consensus 405 ~~~~~~~~~~~a~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~ 484 (576)
+||+.+.++||++++++++++||++.|++ ++.++++.|+|++++++||.
T Consensus 225 -----------------------------gg~~~~~~~ED~~l~~rl~~~G~~i~~~p--~~~~~~~~p~t~~~~~~Qr~ 273 (420)
T PRK11204 225 -----------------------------GYWSTDMITEDIDISWKLQLRGWDIRYEP--RALCWILMPETLKGLWKQRL 273 (420)
T ss_pred -----------------------------CCCCCCcccchHHHHHHHHHcCCeEEecc--ccEEEeECcccHHHHHHHHH
Confidence 68999999999999999999999999998 58999999999999999999
Q ss_pred HhhhhhHHHHhhhc
Q 008144 485 RWGSGLTDVGLSRF 498 (576)
Q Consensus 485 RWa~G~~qv~~~~~ 498 (576)
||++|.+|+++.+.
T Consensus 274 RW~~G~~~~l~~~~ 287 (420)
T PRK11204 274 RWAQGGAEVLLKNF 287 (420)
T ss_pred HHhcCHHHHHHHHH
Confidence 99999999998654
No 18
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=100.00 E-value=1.2e-35 Score=323.40 Aligned_cols=282 Identities=17% Similarity=0.170 Sum_probs=201.0
Q ss_pred CCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCC
Q 008144 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTIC 171 (576)
Q Consensus 92 ~~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~ 171 (576)
+..|.|+|+||+|| |+ +.+.+||.|+.+++||.++++|+|+|||++|.|.+.+.++++
T Consensus 46 ~~~P~vsVIIP~yN---e~-~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~------------------ 103 (439)
T TIGR03111 46 GKLPDITIIIPVYN---SE-DTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQN------------------ 103 (439)
T ss_pred CCCCCEEEEEEeCC---Ch-HHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHHH------------------
Confidence 56899999999999 65 689999999999999999999999999999988654433210
Q ss_pred cccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcE
Q 008144 172 PQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLL 251 (576)
Q Consensus 172 p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l 251 (576)
..|++
T Consensus 104 ---------------------------------------------------------------------------~~~~v 108 (439)
T TIGR03111 104 ---------------------------------------------------------------------------EFPGL 108 (439)
T ss_pred ---------------------------------------------------------------------------hCCCe
Confidence 01223
Q ss_pred EEEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc-CCCCCcceEEEcccceeccC
Q 008144 252 VYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNI 330 (576)
Q Consensus 252 ~yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~-Dp~~g~~vg~VQ~pq~f~n~ 330 (576)
..+..+ +++||++|+|.|++. +++|||+++|||++++ ||++++++..|. ||++ +.|++.+.....
T Consensus 109 ~v~~~~-----~~~Gka~AlN~gl~~----s~g~~v~~~DaD~~~~-~d~L~~l~~~f~~~~~v----~~v~g~~~~~~~ 174 (439)
T TIGR03111 109 SLRYMN-----SDQGKAKALNAAIYN----SIGKYIIHIDSDGKLH-KDAIKNMVTRFENNPDI----HAMTGVILTDKE 174 (439)
T ss_pred EEEEeC-----CCCCHHHHHHHHHHH----ccCCEEEEECCCCCcC-hHHHHHHHHHHHhCCCe----EEEEeEEecCch
Confidence 222222 237999999999999 8999999999999997 999999999997 7874 444333211100
Q ss_pred --Cc-cC---hHHHHHHHHHHHH---H--HHHhh-cCCcc-ccccceEEEcccccccccchhhhhhhcChhHHHHhHHhh
Q 008144 331 --NK-YD---IYDGRFRSAYCVQ---W--QGMDG-LKGPV-LSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQS 397 (576)
Q Consensus 331 --~~-~d---~~~~~~~~f~~~~---~--~g~d~-~~g~~-~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~ 397 (576)
.. .. .+.... .+++.. . +...+ .+..+ .+|+++++||+++..+
T Consensus 175 ~~~~~~~~~~~~~~~~-~~~~y~~~~l~~r~~~s~~~~~~~~sGa~~~~Rr~~l~~v----------------------- 230 (439)
T TIGR03111 175 LIEKTKGRFLKLIRRC-EYFEYAQAFLAGRNFESQVNSLFTLSGAFSAFRRETILKT----------------------- 230 (439)
T ss_pred hhhhhcchhhhHhHHh-HHHHHHHHHHhhhHHHHhcCCeEEEccHHHhhhHHHHHHh-----------------------
Confidence 00 00 011111 112221 1 11222 23332 4678889999999764
Q ss_pred hhcccCCCCCCchhHHHhhcccccccccccCcccccccccCCCccccHHHHHHHHh-cCCeEEEeCCCCCeeEeecCCCH
Q 008144 398 YKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHC-KGWTSTYLTPFRPQFLGTSTTNL 476 (576)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~-~Gwrs~y~~~~~~~~~g~aP~tl 476 (576)
+||+.++++||++++++++. .|+++.|++ ++.++.++|+|+
T Consensus 231 ------------------------------------ggf~~~~i~ED~~l~~rl~~~~g~kv~~~~--~a~~~~~~p~t~ 272 (439)
T TIGR03111 231 ------------------------------------QLYNSETVGEDTDMTFQIRELLDGKVYLCE--NAIFYVDPIDGL 272 (439)
T ss_pred ------------------------------------CCCCCCCcCccHHHHHHHHHhcCCeEEECC--CCEEEEECCcCH
Confidence 68999999999999999975 599999987 589999999999
Q ss_pred HHHHHHHHHhhhhhHHHHhhhcCCcccCCCCCCHHHHHHHHhHhHhhHHhHHHHHHHHHHHHHHHHcCCCcch
Q 008144 477 NDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYP 549 (576)
Q Consensus 477 ~~~l~Qr~RWa~G~~qv~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~~~~~~~~~~~~P~~~ll~g~~~~p 549 (576)
+++++||.||++|.+|++....++.... ...+.+++.+....... ...+|..++.++++++.+.|.++..
T Consensus 273 ~~~~~QR~RW~rG~~qv~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (439)
T TIGR03111 273 NKLYTQRQRWQRGELEVSHMFFESANKS--IKGFFSNFMVRRIMYDH-TFAFPRMIWYFAMIFLIFLGYPVKL 342 (439)
T ss_pred HHHHHHHHHHhccHHHHHHHHHhhhhhc--hhhhhhHHHHHHHHhhH-hhHHHHHHHHHHHHHHHHhccHHHH
Confidence 9999999999999999997544433322 24455665543333333 5577878888888888878765544
No 19
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=100.00 E-value=1.7e-32 Score=301.64 Aligned_cols=261 Identities=16% Similarity=0.093 Sum_probs=183.1
Q ss_pred CCCCceEEEEecCCCCCCChHHHHHHHHHH-HcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccC
Q 008144 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSA-MALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI 170 (576)
Q Consensus 92 ~~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~-~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r 170 (576)
...|+|+|+||+|| |+ ++|.+||.++ .++|||. ++|+|+||+++|.|.+.+.+.++
T Consensus 63 ~~~p~vaIlIPA~N---E~-~vI~~~l~s~L~~ldY~~--~eIiVv~d~ndd~T~~~v~~l~~----------------- 119 (504)
T PRK14716 63 VPEKRIAIFVPAWR---EA-DVIGRMLEHNLATLDYEN--YRIFVGTYPNDPATLREVDRLAA----------------- 119 (504)
T ss_pred CCCCceEEEEeccC---ch-hHHHHHHHHHHHcCCCCC--eEEEEEECCCChhHHHHHHHHHH-----------------
Confidence 34899999999999 65 5999999996 4789975 99999999999988764443210
Q ss_pred CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCc
Q 008144 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPL 250 (576)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~ 250 (576)
.+|+
T Consensus 120 ----------------------------------------------------------------------------~~p~ 123 (504)
T PRK14716 120 ----------------------------------------------------------------------------RYPR 123 (504)
T ss_pred ----------------------------------------------------------------------------HCCC
Confidence 1233
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHHcC--CCCCC---CEEEEeCCCCCCCchHHHHHHHHHhcCCCCCcceEEEcccc
Q 008144 251 LVYVSREKRPEHLHHFKAGALNVLLRVSG--VISNS---PYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQ 325 (576)
Q Consensus 251 l~yv~Rekrpg~~~~~KAgALN~aL~~~~--~~s~g---e~Il~lDAD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq 325 (576)
++.+.- +++| ..+|++|||.+++... ....| |+|+++|||++++ |++|+....++.|+ ++||.|.
T Consensus 124 v~~vv~-~~~g--p~~Ka~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~v~-Pd~Lr~~~~~~~~~------~~VQ~pv 193 (504)
T PRK14716 124 VHLVIV-PHDG--PTSKADCLNWIYQAIFAFERERGIRFAIIVLHDAEDVIH-PLELRLYNYLLPRH------DFVQLPV 193 (504)
T ss_pred eEEEEe-CCCC--CCCHHHHHHHHHHHHHHhhhhcCCCcCEEEEEcCCCCcC-ccHHHHHHhhcCCC------CEEecce
Confidence 333321 2232 3689999999997631 01234 9999999999998 99998765555443 5789997
Q ss_pred eeccCCccChHHHHHH-HH---HHHHHHHHhhcCCcc-ccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhc
Q 008144 326 KFHNINKYDIYDGRFR-SA---YCVQWQGMDGLKGPV-LSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQ 400 (576)
Q Consensus 326 ~f~n~~~~d~~~~~~~-~f---~~~~~~g~d~~~g~~-~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~ 400 (576)
...+.+.....+.... .| +...+..++.+++++ ++|+|+++||++|+.+.
T Consensus 194 ~~~~~~~~~~~ag~y~~ef~~~~~~~l~~r~~LG~~~~~~Gtg~afRR~aLe~l~------------------------- 248 (504)
T PRK14716 194 FSLPRDWGEWVAGTYMDEFAESHLKDLPVREALGGLIPSAGVGTAFSRRALERLA------------------------- 248 (504)
T ss_pred eccCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCeeEEeEHHHHHHHH-------------------------
Confidence 6655332222221111 12 222345567888775 78999999999998641
Q ss_pred ccCCCCCCchhHHHhhcccccccccccCcccccc-cccCCCccccHHHHHHHHhcCCeEEEeCCCCCe------------
Q 008144 401 NNANGENFSNVLQEETGVLASCSYEHQTKWGEEV-GILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQ------------ 467 (576)
Q Consensus 401 ~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~~-G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~------------ 467 (576)
++. .| +|+++++|||+++|++++.+|||++|++. +.
T Consensus 249 -------------~~~----------------GG~~fd~~sLTED~dLglRL~~~G~rv~y~p~--ai~~~~~~~~~~~~ 297 (504)
T PRK14716 249 -------------AER----------------GGQPFDSDSLTEDYDIGLRLKRAGFRQIFVRV--RADDTTDRPDRRGE 297 (504)
T ss_pred -------------hhc----------------CCCCCCCCCcchHHHHHHHHHHCCCEEEEecc--cccccccccccccc
Confidence 000 02 39999999999999999999999999873 43
Q ss_pred ---eEeecCCCHHHHHHHHHHhhhhh-HHHHhhhcCCcccC--CCCCCHHHHHHHHhH
Q 008144 468 ---FLGTSTTNLNDLLIQGTRWGSGL-TDVGLSRFCPLLYG--PSRMSLLQSMCYGEL 519 (576)
Q Consensus 468 ---~~g~aP~tl~~~l~Qr~RWa~G~-~qv~~~~~~p~~~~--~~~l~~~qrl~y~~~ 519 (576)
..+++|+|++++++||.||+.|. +|.... . -+..+ .+.+.+++|.+.+..
T Consensus 298 ~v~t~e~~P~t~~a~~rQR~RW~~Gi~~Q~~~~-~-gw~~~~~~~~~~~rdr~~~~~~ 353 (504)
T PRK14716 298 PIATREFFPDTFKAAVRQKARWIYGIAFQGWER-L-GWKGPAATKYMLWRDRKGLLTN 353 (504)
T ss_pred cccccccCccCHHHHHHHHHHHHhchHHhhHHh-c-CCCCchhhhhhHHHHHHHHHHH
Confidence 44789999999999999999995 787642 1 11111 123678888876653
No 20
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=100.00 E-value=1.7e-32 Score=271.52 Aligned_cols=227 Identities=25% Similarity=0.319 Sum_probs=175.8
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCccc
Q 008144 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (576)
Q Consensus 95 P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~ 174 (576)
|+|+|+||+|| |+ +.|.++|.|+++++||.++++|+|+|| ++|.|.+.+.+..+
T Consensus 1 p~vSViIp~yN---e~-~~l~~~L~sl~~q~~~~~~~eIiVvD~-s~D~t~~~~~~~~~--------------------- 54 (232)
T cd06437 1 PMVTVQLPVFN---EK-YVVERLIEAACALDYPKDRLEIQVLDD-STDETVRLAREIVE--------------------- 54 (232)
T ss_pred CceEEEEecCC---cH-HHHHHHHHHHHhcCCCccceEEEEEEC-CCCcHHHHHHHHHH---------------------
Confidence 68999999999 65 689999999999999998999999998 88888765443210
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEEE
Q 008144 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYV 254 (576)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv 254 (576)
.+.. .-+++.++
T Consensus 55 -------------------------~~~~-------------------------------------------~~~~i~~~ 66 (232)
T cd06437 55 -------------------------EYAA-------------------------------------------QGVNIKHV 66 (232)
T ss_pred -------------------------HHhh-------------------------------------------cCCceEEE
Confidence 0000 01246777
Q ss_pred eccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCcceEEEcccceeccCCccC
Q 008144 255 SREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYD 334 (576)
Q Consensus 255 ~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d 334 (576)
.+.++ .++|++|+|.|++. ++++||+++|||++++ |++|.++..++.||+ +|+||....+.|... .
T Consensus 67 ~~~~~----~G~k~~a~n~g~~~----a~~~~i~~~DaD~~~~-~~~l~~~~~~~~~~~----v~~v~~~~~~~~~~~-~ 132 (232)
T cd06437 67 RRADR----TGYKAGALAEGMKV----AKGEYVAIFDADFVPP-PDFLQKTPPYFADPK----LGFVQTRWGHINANY-S 132 (232)
T ss_pred ECCCC----CCCchHHHHHHHHh----CCCCEEEEEcCCCCCC-hHHHHHhhhhhcCCC----eEEEecceeeEcCCC-c
Confidence 76553 45799999999999 8999999999999997 999999888777887 789998776655321 1
Q ss_pred hHHHHH----HHHHHHHHHHHhhcCCc-cccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCCCCCc
Q 008144 335 IYDGRF----RSAYCVQWQGMDGLKGP-VLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFS 409 (576)
Q Consensus 335 ~~~~~~----~~f~~~~~~g~d~~~g~-~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~ 409 (576)
.+.... ..++.....+....+.. .++|+++++||+++..+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~v----------------------------------- 177 (232)
T cd06437 133 LLTRVQAMSLDYHFTIEQVARSSTGLFFNFNGTAGVWRKECIEDA----------------------------------- 177 (232)
T ss_pred hhhHhhhhhHHhhhhHhHhhHhhcCCeEEeccchhhhhHHHHHHh-----------------------------------
Confidence 111111 11233333343333333 35788899999999765
Q ss_pred hhHHHhhcccccccccccCcccccccccCCCccccHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHHHHHHHhhhh
Q 008144 410 NVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSG 489 (576)
Q Consensus 410 ~~~~~~a~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G 489 (576)
+||...++.||+++++|++.+||+++|++ ++.++...|+|++++++||+||++|
T Consensus 178 ------------------------gg~~~~~~~ED~~l~~rl~~~G~~~~~~~--~~~v~~~~~~~~~~~~~q~~rW~~g 231 (232)
T cd06437 178 ------------------------GGWNHDTLTEDLDLSYRAQLKGWKFVYLD--DVVVPAELPASMSAYRSQQHRWSKG 231 (232)
T ss_pred ------------------------CCCCCCcchhhHHHHHHHHHCCCeEEEec--cceeeeeCCcCHHHHHHHHHHhccC
Confidence 58988888999999999999999999998 6999999999999999999999998
Q ss_pred h
Q 008144 490 L 490 (576)
Q Consensus 490 ~ 490 (576)
.
T Consensus 232 ~ 232 (232)
T cd06437 232 P 232 (232)
T ss_pred C
Confidence 4
No 21
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=100.00 E-value=6.9e-32 Score=265.02 Aligned_cols=229 Identities=36% Similarity=0.516 Sum_probs=184.3
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCccc
Q 008144 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (576)
Q Consensus 95 P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~ 174 (576)
|.|+|+||+|| |+++.+++++.|+++++||.++++|+|+|||++|.|.+.+.+. +.
T Consensus 1 p~vsviip~~n---~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~--------------~~------- 56 (234)
T cd06421 1 PTVDVFIPTYN---EPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAAEL--------------GV------- 56 (234)
T ss_pred CceEEEEecCC---CcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHHHHh--------------hc-------
Confidence 78999999999 7667899999999999999988999999999999765322210 00
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEEE
Q 008144 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYV 254 (576)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv 254 (576)
. .++.++
T Consensus 57 ------------------------------------------------------------------------~-~~~~~~ 63 (234)
T cd06421 57 ------------------------------------------------------------------------E-YGYRYL 63 (234)
T ss_pred ------------------------------------------------------------------------c-cCceEE
Confidence 0 024556
Q ss_pred eccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcC-CCCCcceEEEcccceeccCCcc
Q 008144 255 SREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD-PKISSSLAFVQFPQKFHNINKY 333 (576)
Q Consensus 255 ~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~D-p~~g~~vg~VQ~pq~f~n~~~~ 333 (576)
.+++ +.++|++|+|.|++. +++|||+++|+|.+++ |++|.+++..+.+ ++ ++.|++++.+.+.+..
T Consensus 64 ~~~~----~~~~~~~~~n~~~~~----a~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~~~----~~~v~~~~~~~~~~~~ 130 (234)
T cd06421 64 TRPD----NRHAKAGNLNNALAH----TTGDFVAILDADHVPT-PDFLRRTLGYFLDDPK----VALVQTPQFFYNPDPF 130 (234)
T ss_pred EeCC----CCCCcHHHHHHHHHh----CCCCEEEEEccccCcC-ccHHHHHHHHHhcCCC----eEEEecceEEecCCcc
Confidence 5554 457899999999999 8999999999999997 9999999999975 76 7899999888765432
Q ss_pred C----hHHHHHHHHHHHHHHHHhhcCCccccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCCCCCc
Q 008144 334 D----IYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFS 409 (576)
Q Consensus 334 d----~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~ 409 (576)
. .+......++.....+...++...++|++.++||+++..+
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~~~i----------------------------------- 175 (234)
T cd06421 131 DWLADGAPNEQELFYGVIQPGRDRWGAAFCCGSGAVVRREALDEI----------------------------------- 175 (234)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcCCceecCceeeEeHHHHHHh-----------------------------------
Confidence 1 1222223444445555555566678899999999999865
Q ss_pred hhHHHhhcccccccccccCcccccccccCCCccccHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHHHHHHHhhhh
Q 008144 410 NVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSG 489 (576)
Q Consensus 410 ~~~~~~a~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G 489 (576)
+||+...+.||++++++++++||+++|.+ .+.+++..|.+++.+++||.||.+|
T Consensus 176 ------------------------g~~~~~~~~eD~~l~~r~~~~g~~i~~~~--~~~~~~~~~~~~~~~~~q~~rw~~~ 229 (234)
T cd06421 176 ------------------------GGFPTDSVTEDLATSLRLHAKGWRSVYVP--EPLAAGLAPETLAAYIKQRLRWARG 229 (234)
T ss_pred ------------------------CCCCccceeccHHHHHHHHHcCceEEEec--CccccccCCccHHHHHHHHHHHhcC
Confidence 57887788999999999999999999998 5899999999999999999999999
Q ss_pred hHHHH
Q 008144 490 LTDVG 494 (576)
Q Consensus 490 ~~qv~ 494 (576)
++|++
T Consensus 230 ~~~~~ 234 (234)
T cd06421 230 MLQIL 234 (234)
T ss_pred CeeeC
Confidence 98853
No 22
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=100.00 E-value=1.4e-30 Score=296.88 Aligned_cols=240 Identities=20% Similarity=0.234 Sum_probs=173.3
Q ss_pred CCCCCceEEEEecCCCCCCChHHHHHHHHHHH-cCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCcc
Q 008144 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAM-ALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKT 169 (576)
Q Consensus 91 ~~~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~-~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~ 169 (576)
.++.|+|+|+||+|| |+ .++.+|+.+++ ++|||+ ++|+|++|++++.|.+.+.+.+ ++
T Consensus 59 ~~~~~~vsIlVPa~n---E~-~vi~~~i~~ll~~ldYP~--~eI~vi~~~nD~~T~~~~~~l~----------~~----- 117 (727)
T PRK11234 59 KPDEKPLAIMVPAWN---ET-GVIGNMAELAATTLDYEN--YHIFVGTYPNDPATQADVDAVC----------AR----- 117 (727)
T ss_pred cCCCCCEEEEEecCc---ch-hhHHHHHHHHHHhCCCCC--eEEEEEecCCChhHHHHHHHHH----------HH-----
Confidence 356799999999999 66 59999999987 799998 9999999988887765443321 11
Q ss_pred CCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCC
Q 008144 170 ICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMP 249 (576)
Q Consensus 170 r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P 249 (576)
+|
T Consensus 118 ------------------------------------------------------------------------------~p 119 (727)
T PRK11234 118 ------------------------------------------------------------------------------FP 119 (727)
T ss_pred ------------------------------------------------------------------------------CC
Confidence 12
Q ss_pred cEEEEeccCCCCCCCCChHHHHHHHHHHcCCC-----CCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCcceEEEccc
Q 008144 250 LLVYVSREKRPEHLHHFKAGALNVLLRVSGVI-----SNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFP 324 (576)
Q Consensus 250 ~l~yv~Rekrpg~~~~~KAgALN~aL~~~~~~-----s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~p 324 (576)
++..+.-++ +| .++||+|||.++...... .+.++++++|||++++ |++|+ .+.++.++. ++||.|
T Consensus 120 ~~~~v~~~~-~g--~~gKa~aLN~~l~~~~~~e~~~~~~~~vvvi~DAD~~v~-pd~L~-~~~~l~~~~-----~~VQ~p 189 (727)
T PRK11234 120 NVHKVVCAR-PG--PTSKADCLNNVLDAITQFERSANFAFAGFILHDAEDVIS-PMELR-LFNYLVERK-----DLIQIP 189 (727)
T ss_pred CcEEEEeCC-CC--CCCHHHHHHHHHHHHHhhhcccCCcccEEEEEcCCCCCC-hhHHH-HHHhhcCCC-----CeEeec
Confidence 333222221 33 368999999999984110 2346788899999997 99997 677777764 689999
Q ss_pred ceeccCCccChHHHHHHHHH----HHHHHHHhhcCCcc-ccccceEEEcc---cccccccchhhhhhhcChhHHHHhHHh
Q 008144 325 QKFHNINKYDIYDGRFRSAY----CVQWQGMDGLKGPV-LSGTGYYIKRE---SLYADFTHTELKDTFGKSNVLINSLHQ 396 (576)
Q Consensus 325 q~f~n~~~~d~~~~~~~~f~----~~~~~g~d~~~g~~-~~Gtg~~~RR~---AL~~i~~~~~~~~~fg~~~~~~~~~~~ 396 (576)
....+.+.+...+..+...| ...+.+++.+++++ +.|+|++|.|+ +|.+++
T Consensus 190 ~~p~~~~~~~~~~~~~~~EFa~~~~~~~~~~~~lgg~~~l~G~~~af~Rr~l~al~~~g--------------------- 248 (727)
T PRK11234 190 VYPFEREWTHFTSGTYIDEFAELHGKDVPVREALAGQVPSAGVGTCFSRRAVTALLEDG--------------------- 248 (727)
T ss_pred ccCCCccHHHHHHHHHHHHHHHHhhhhhHHHHHcCCCcccCCceEEEecccHHHHHHhc---------------------
Confidence 66433322222333222223 34567888887775 78999999444 444321
Q ss_pred hhhcccCCCCCCchhHHHhhcccccccccccCcccccccccCCCccccHHHHHHHHhcCCeEEEeCCC----------C-
Q 008144 397 SYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPF----------R- 465 (576)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~----------~- 465 (576)
...+|..+++|||+++|++|+.+||+++|++.. +
T Consensus 249 -----------------------------------gg~~~~~~~lTED~dlg~rL~~~G~~v~f~~~~v~~~~~~~~~~~ 293 (727)
T PRK11234 249 -----------------------------------DGIAFDVQSLTEDYDIGFRLKEKGMREIFVRFPVVDEAKEREQRK 293 (727)
T ss_pred -----------------------------------CCCCcCCCcchHHHHHHHHHHHCCCEEEEcccccccccccccccc
Confidence 012699999999999999999999999999810 1
Q ss_pred ----------CeeEeecCCCHHHHHHHHHHhhhh-hHHHHh
Q 008144 466 ----------PQFLGTSTTNLNDLLIQGTRWGSG-LTDVGL 495 (576)
Q Consensus 466 ----------~~~~g~aP~tl~~~l~Qr~RWa~G-~~qv~~ 495 (576)
.++++..|+|+++.++||.||.+| .+|...
T Consensus 294 ~~~~~~~~~~~~~~~~~P~t~~~~~rQR~RW~~G~~~q~~~ 334 (727)
T PRK11234 294 FLQHARTSNMICVREYFPDTFSAAVRQKSRWIIGIVFQGFK 334 (727)
T ss_pred cccccccccceEEEEeCchhHHHHHHHHHHHHcccHHHHHH
Confidence 448899999999999999999999 577754
No 23
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=99.98 E-value=3.3e-31 Score=264.51 Aligned_cols=229 Identities=24% Similarity=0.282 Sum_probs=178.2
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCccc
Q 008144 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (576)
Q Consensus 95 P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~ 174 (576)
|.|+|+||+|| |+ +.+.+||.|+++++||.++++|+|+|||++|.|.+.+.+.. .
T Consensus 1 p~vsIiIp~~N---e~-~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~~~--------------~------- 55 (241)
T cd06427 1 PVYTILVPLYK---EA-EVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARALR--------------L------- 55 (241)
T ss_pred CeEEEEEecCC---cH-HHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHHhc--------------c-------
Confidence 78999999999 65 68999999999999998889999999999998864332100 0
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEEE
Q 008144 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYV 254 (576)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv 254 (576)
+ ...+++++
T Consensus 56 -------------------------------------------------~----------------------~~~~i~~~ 64 (241)
T cd06427 56 -------------------------------------------------P----------------------SIFRVVVV 64 (241)
T ss_pred -------------------------------------------------C----------------------CCeeEEEe
Confidence 0 00124444
Q ss_pred eccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc--CCCCCcceEEEcccceeccCCc
Q 008144 255 SREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL--DPKISSSLAFVQFPQKFHNINK 332 (576)
Q Consensus 255 ~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~--Dp~~g~~vg~VQ~pq~f~n~~~ 332 (576)
... ...||++|+|.|++. ++||||+++|+|++++ |+++.+++.+|. +++ +++||++..+.+...
T Consensus 65 ~~~-----~~~G~~~a~n~g~~~----a~gd~i~~~DaD~~~~-~~~l~~~~~~~~~~~~~----v~~~~~~~~~~~~~~ 130 (241)
T cd06427 65 PPS-----QPRTKPKACNYALAF----ARGEYVVIYDAEDAPD-PDQLKKAVAAFARLDDK----LACVQAPLNYYNARE 130 (241)
T ss_pred cCC-----CCCchHHHHHHHHHh----cCCCEEEEEcCCCCCC-hHHHHHHHHHHHhcCCC----EEEEeCceEeeCCCc
Confidence 332 236899999999999 8999999999999998 999999999886 244 788998877765421
Q ss_pred cChHHH----HHHHHHHHHHHHHhhcCCcc-ccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCCCC
Q 008144 333 YDIYDG----RFRSAYCVQWQGMDGLKGPV-LSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGEN 407 (576)
Q Consensus 333 ~d~~~~----~~~~f~~~~~~g~d~~~g~~-~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~ 407 (576)
..... .....+.....+....+... ++|++.++||+++..+
T Consensus 131 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~v--------------------------------- 176 (241)
T cd06427 131 -NWLTRMFALEYAAWFDYLLPGLARLGLPIPLGGTSNHFRTDVLREL--------------------------------- 176 (241)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHHhcCCeeecCCchHHhhHHHHHHc---------------------------------
Confidence 11111 11223444455555555554 5688889999999865
Q ss_pred CchhHHHhhcccccccccccCcccccccccCCCccccHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHHHHHHHhh
Q 008144 408 FSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWG 487 (576)
Q Consensus 408 ~~~~~~~~a~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~RWa 487 (576)
+||.....+||++++++++.+||++.|++ ..+++..|+|++++++||.||.
T Consensus 177 --------------------------gg~~~~~~~eD~~l~~rl~~~G~r~~~~~---~~~~~~~~~~~~~~~~q~~Rw~ 227 (241)
T cd06427 177 --------------------------GGWDPFNVTEDADLGLRLARAGYRTGVLN---STTLEEANNALGNWIRQRSRWI 227 (241)
T ss_pred --------------------------CCCCcccchhhHHHHHHHHHCCceEEEec---ccccccCcHhHHHHHHHHHHHh
Confidence 57887788999999999999999999996 3568899999999999999999
Q ss_pred hhhHHHHhh
Q 008144 488 SGLTDVGLS 496 (576)
Q Consensus 488 ~G~~qv~~~ 496 (576)
+|.+|++..
T Consensus 228 ~g~~~~~~~ 236 (241)
T cd06427 228 KGYMQTWLV 236 (241)
T ss_pred ccHHHHHHH
Confidence 999999874
No 24
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=99.97 E-value=2e-30 Score=256.38 Aligned_cols=231 Identities=23% Similarity=0.314 Sum_probs=173.3
Q ss_pred EEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCcccccc
Q 008144 98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177 (576)
Q Consensus 98 dV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 177 (576)
+|+||+|| |+++.+.+++.|+++++||. ++|+|+|||++|.|.....+. +|++++
T Consensus 1 siiip~~n---e~~~~l~~~l~sl~~q~~~~--~eiiVvdd~s~D~t~~~~i~~---------~~~~~~----------- 55 (236)
T cd06435 1 SIHVPCYE---EPPEMVKETLDSLAALDYPN--FEVIVIDNNTKDEALWKPVEA---------HCAQLG----------- 55 (236)
T ss_pred CeeEeeCC---CcHHHHHHHHHHHHhCCCCC--cEEEEEeCCCCchhHHHHHHH---------HHHHhC-----------
Confidence 58999999 77679999999999999997 899999999999874211110 000000
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEEEecc
Q 008144 178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSRE 257 (576)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv~Re 257 (576)
+++.++..+
T Consensus 56 -----------------------------------------------------------------------~~i~~i~~~ 64 (236)
T cd06435 56 -----------------------------------------------------------------------ERFRFFHVE 64 (236)
T ss_pred -----------------------------------------------------------------------CcEEEEEcC
Confidence 135566554
Q ss_pred CCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCcceEEEcccceeccCCccChHH
Q 008144 258 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYD 337 (576)
Q Consensus 258 krpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~~ 337 (576)
+ +.++|++|+|.|++.+. .++|+|+++|+|.+++ |++|.+++..|.+++ +++|+++..+.+.. ..++.
T Consensus 65 ~----~~G~~~~a~n~g~~~a~--~~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~~----~~~v~~~~~~~~~~-~~~~~ 132 (236)
T cd06435 65 P----LPGAKAGALNYALERTA--PDAEIIAVIDADYQVE-PDWLKRLVPIFDDPR----VGFVQAPQDYRDGE-ESLFK 132 (236)
T ss_pred C----CCCCchHHHHHHHHhcC--CCCCEEEEEcCCCCcC-HHHHHHHHHHhcCCC----eeEEecCccccCCC-ccHHH
Confidence 4 34579999999999842 3589999999999998 999999999988776 78999876554321 22232
Q ss_pred HHHHH----HHHHHHHHHhhcCCccccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCCCCCchhHH
Q 008144 338 GRFRS----AYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQ 413 (576)
Q Consensus 338 ~~~~~----f~~~~~~g~d~~~g~~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (576)
..... +|..........+..++.|+++++||+++..+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~i--------------------------------------- 173 (236)
T cd06435 133 RMCYAEYKGFFDIGMVSRNERNAIIQHGTMCLIRRSALDDV--------------------------------------- 173 (236)
T ss_pred HHHhHHHHHHHHHHhccccccCceEEecceEEEEHHHHHHh---------------------------------------
Confidence 11111 11111112222233456788899999999865
Q ss_pred HhhcccccccccccCcccccccccCCCccccHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHHHHHHHhhhhhHHH
Q 008144 414 EETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDV 493 (576)
Q Consensus 414 ~~a~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G~~qv 493 (576)
+||+.....||++++++++.+||++.|++ ++..+...|+|+.++++||.||++|.+|+
T Consensus 174 --------------------Ggf~~~~~~eD~dl~~r~~~~G~~~~~~~--~~~~~~~~~~~~~~~~~q~~rw~~g~~~~ 231 (236)
T cd06435 174 --------------------GGWDEWCITEDSELGLRMHEAGYIGVYVA--QSYGHGLIPDTFEAFKKQRFRWAYGAVQI 231 (236)
T ss_pred --------------------CCCCCccccchHHHHHHHHHCCcEEEEcc--hhhccCcCcccHHHHHHHHHHHhcchhhh
Confidence 57888888999999999999999999997 47889999999999999999999999999
Q ss_pred Hhhh
Q 008144 494 GLSR 497 (576)
Q Consensus 494 ~~~~ 497 (576)
+..|
T Consensus 232 ~~~~ 235 (236)
T cd06435 232 LKKH 235 (236)
T ss_pred hhcc
Confidence 8753
No 25
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=99.96 E-value=1e-30 Score=256.83 Aligned_cols=224 Identities=25% Similarity=0.284 Sum_probs=145.4
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCccc
Q 008144 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (576)
Q Consensus 95 P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~ 174 (576)
|+|+|+||+|| |+ +.+.++|.|+++++||. ++|+|+||++++.|.+.+.+.++ +
T Consensus 1 P~v~Vvip~~~---~~-~~l~~~l~sl~~~~~~~--~~v~vvd~~~~~~~~~~~~~~~~----------~---------- 54 (228)
T PF13641_consen 1 PRVSVVIPAYN---ED-DVLRRCLESLLAQDYPR--LEVVVVDDGSDDETAEILRALAA----------R---------- 54 (228)
T ss_dssp --EEEE--BSS----H-HHHHHHHHHHTTSHHHT--EEEEEEEE-SSS-GCTTHHHHHH----------T----------
T ss_pred CEEEEEEEecC---CH-HHHHHHHHHHHcCCCCC--eEEEEEECCCChHHHHHHHHHHH----------H----------
Confidence 78999999999 76 59999999999999965 99999999999977643332110 0
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEEE
Q 008144 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYV 254 (576)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv 254 (576)
+|. -++.++
T Consensus 55 ------------------------------------------------~~~-----------------------~~v~vi 63 (228)
T PF13641_consen 55 ------------------------------------------------YPR-----------------------VRVRVI 63 (228)
T ss_dssp ------------------------------------------------TGG------------------------GEEEE
T ss_pred ------------------------------------------------cCC-----------------------CceEEe
Confidence 000 025777
Q ss_pred eccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCcceEEEcccceeccCCccC
Q 008144 255 SREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYD 334 (576)
Q Consensus 255 ~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d 334 (576)
.+++++| ..+|++|+|.+++. +++|+|+++|+|++++ |++|.+++.+|.+|+ +++|+++..+.+. ..
T Consensus 64 ~~~~~~g--~~~k~~a~n~~~~~----~~~d~i~~lD~D~~~~-p~~l~~~~~~~~~~~----~~~v~~~~~~~~~--~~ 130 (228)
T PF13641_consen 64 RRPRNPG--PGGKARALNEALAA----ARGDYILFLDDDTVLD-PDWLERLLAAFADPG----VGAVGGPVFPDND--RN 130 (228)
T ss_dssp E----HH--HHHHHHHHHHHHHH-------SEEEEE-SSEEE--CHHHHHHHHHHHBSS------EEEEEEEETTC--CC
T ss_pred ecCCCCC--cchHHHHHHHHHHh----cCCCEEEEECCCcEEC-HHHHHHHHHHHHhCC----CCeEeeeEeecCC--CC
Confidence 7655332 23799999999999 8899999999999997 999999999998887 7889987766542 21
Q ss_pred hHHHHHHHHH----HHHHHHHhhcCCccccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCCCCCch
Q 008144 335 IYDGRFRSAY----CVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSN 410 (576)
Q Consensus 335 ~~~~~~~~f~----~~~~~g~d~~~g~~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (576)
.+......++ .....+....+..+++|+++++||+++..+
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~~~~~------------------------------------ 174 (228)
T PF13641_consen 131 WLTRLQDLFFARWHLRFRSGRRALGVAFLSGSGMLFRRSALEEV------------------------------------ 174 (228)
T ss_dssp EEEE-TT--S-EETTTS-TT-B----S-B--TEEEEEHHHHHHH------------------------------------
T ss_pred HHHHHHHHHHhhhhhhhhhhhcccceeeccCcEEEEEHHHHHHh------------------------------------
Confidence 1111111111 011222334444567899999999999765
Q ss_pred hHHHhhcccccccccccCcccccccccCCCccccHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHHHHHHHhhhh
Q 008144 411 VLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSG 489 (576)
Q Consensus 411 ~~~~~a~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G 489 (576)
+||+.....||.++++++.++||++.|++ ++.++...|.|++++++||.||++|
T Consensus 175 -----------------------g~fd~~~~~eD~~l~~r~~~~G~~~~~~~--~~~v~~~~~~~~~~~~~q~~RW~~g 228 (228)
T PF13641_consen 175 -----------------------GGFDPFILGEDFDLCLRLRAAGWRIVYAP--DALVYHEEPSSLKAFFKQRFRWSRG 228 (228)
T ss_dssp ------------------------S--SSSSSHHHHHHHHHHHTT--EEEEE--EEEEEE--SSSTHHHHHHHHHHH--
T ss_pred -----------------------CCCCCCCcccHHHHHHHHHHCCCcEEEEC--CcEEEEeCCCCHHHHHHHHhccCcC
Confidence 57888888899999999999999999998 5899999999999999999999987
No 26
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=99.96 E-value=8.2e-28 Score=256.66 Aligned_cols=229 Identities=16% Similarity=0.172 Sum_probs=168.6
Q ss_pred CCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCC
Q 008144 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTIC 171 (576)
Q Consensus 92 ~~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~ 171 (576)
...|+|+|+||+|| |+ +.+.+||.|+++||||. +||+|+||+++|.|.+.+.+.+
T Consensus 38 ~~~p~VSViiP~~n---ee-~~l~~~L~Sl~~q~Yp~--~EIivvdd~s~D~t~~iv~~~~------------------- 92 (373)
T TIGR03472 38 RAWPPVSVLKPLHG---DE-PELYENLASFCRQDYPG--FQMLFGVQDPDDPALAVVRRLR------------------- 92 (373)
T ss_pred CCCCCeEEEEECCC---CC-hhHHHHHHHHHhcCCCC--eEEEEEeCCCCCcHHHHHHHHH-------------------
Confidence 44799999999999 65 47999999999999997 9999999999997764332211
Q ss_pred cccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcE
Q 008144 172 PQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLL 251 (576)
Q Consensus 172 p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l 251 (576)
+. ||. .++
T Consensus 93 ---------------------------~~----------------------~p~-----------------------~~i 100 (373)
T TIGR03472 93 ---------------------------AD----------------------FPD-----------------------ADI 100 (373)
T ss_pred ---------------------------Hh----------------------CCC-----------------------Cce
Confidence 00 111 135
Q ss_pred EEEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCcceEEEcccceeccCC
Q 008144 252 VYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNIN 331 (576)
Q Consensus 252 ~yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~ 331 (576)
+++..+++.| .++|++|+|++++. +++|+++++|||++++ ||+|++++..|.||+ ++.|+++....+
T Consensus 101 ~~v~~~~~~G--~~~K~~~l~~~~~~----a~ge~i~~~DaD~~~~-p~~L~~lv~~~~~~~----v~~V~~~~~~~~-- 167 (373)
T TIGR03472 101 DLVIDARRHG--PNRKVSNLINMLPH----ARHDILVIADSDISVG-PDYLRQVVAPLADPD----VGLVTCLYRGRP-- 167 (373)
T ss_pred EEEECCCCCC--CChHHHHHHHHHHh----ccCCEEEEECCCCCcC-hhHHHHHHHHhcCCC----cceEeccccCCC--
Confidence 6665544333 34799999999998 8999999999999997 999999999999888 678887643221
Q ss_pred ccChHHHHH-HHHHHH-HHHH---HhhcCC-ccccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCC
Q 008144 332 KYDIYDGRF-RSAYCV-QWQG---MDGLKG-PVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANG 405 (576)
Q Consensus 332 ~~d~~~~~~-~~f~~~-~~~g---~d~~~g-~~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~ 405 (576)
.+. +.... ..+... ..++ ....+. .++.|++.++||++++.+
T Consensus 168 ~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~a~RR~~l~~i------------------------------- 215 (373)
T TIGR03472 168 VPG-FWSRLGAMGINHNFLPSVMVARALGRARFCFGATMALRRATLEAI------------------------------- 215 (373)
T ss_pred CCC-HHHHHHHHHhhhhhhHHHHHHHhccCCccccChhhheeHHHHHHc-------------------------------
Confidence 122 22221 111111 1111 122233 246788889999999876
Q ss_pred CCCchhHHHhhcccccccccccCcccccccccC--CCccccHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHHHHH
Q 008144 406 ENFSNVLQEETGVLASCSYEHQTKWGEEVGILY--QSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQG 483 (576)
Q Consensus 406 ~~~~~~~~~~a~~v~~c~ye~~t~wg~~~G~~~--~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr 483 (576)
|||.. ++++||++++.++.++||++.|.+ .+......|+|++++++||
T Consensus 216 ----------------------------GGf~~~~~~~~ED~~l~~~i~~~G~~v~~~~--~~v~~~~~~~s~~~~~~q~ 265 (373)
T TIGR03472 216 ----------------------------GGLAALAHHLADDYWLGELVRALGLRVVLAP--VVVDTDVHETSFATLLAHE 265 (373)
T ss_pred ----------------------------CChHHhcccchHHHHHHHHHHHcCCeEEecc--hhhhcCCCccCHHHHHHHH
Confidence 57764 577899999999999999999986 4777788889999999999
Q ss_pred HHhhhhhHH
Q 008144 484 TRWGSGLTD 492 (576)
Q Consensus 484 ~RWa~G~~q 492 (576)
.||++....
T Consensus 266 ~RW~r~~~~ 274 (373)
T TIGR03472 266 LRWSRTIRA 274 (373)
T ss_pred HHHHhhhhc
Confidence 999876654
No 27
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=99.96 E-value=5.5e-29 Score=250.24 Aligned_cols=172 Identities=17% Similarity=0.022 Sum_probs=116.6
Q ss_pred HHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc-CCCCCcceEEEcccceeccCCccChHHHHHHHHHH---
Q 008144 270 ALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYC--- 345 (576)
Q Consensus 270 ALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~-Dp~~g~~vg~VQ~pq~f~n~~~~d~~~~~~~~f~~--- 345 (576)
++|.++.. +++|||+++|||++++ |++|++++.+|. ||+ +|.|++.....|.. ...+...+...|.
T Consensus 64 ~~~~~~~~----a~~e~i~~~DaD~~~~-~~~l~~l~~~~~~~p~----vg~v~g~~~~~~~~-~~~~~~~q~~ey~~~~ 133 (244)
T cd04190 64 YFCRVLFP----DDPEFILLVDADTKFD-PDSIVQLYKAMDKDPE----IGGVCGEIHPMGKK-QGPLVMYQVFEYAISH 133 (244)
T ss_pred HHHHHhhc----CCCCEEEEECCCCcCC-HhHHHHHHHHHHhCCC----EEEEEeeeEEcCCc-chhHHHhHheehhhhh
Confidence 45666666 8999999999999997 999999999984 888 77888887666532 1222222221121
Q ss_pred HHH-HHHhhcCCc-cccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCCCCCchhHHHhhccccccc
Q 008144 346 VQW-QGMDGLKGP-VLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCS 423 (576)
Q Consensus 346 ~~~-~g~d~~~g~-~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ 423 (576)
... .....++.. +..|++++||+++|.+++.. +.. +..+.
T Consensus 134 ~~~~~~~s~~g~~~~~~G~~~~~R~~~l~~~~~~---------~~~-----------------------------~~~~~ 175 (244)
T cd04190 134 WLDKAFESVFGFVTCLPGCFSMYRIEALKGDNGG---------KGP-----------------------------LLDYA 175 (244)
T ss_pred hhcccHHHcCCceEECCCceEEEEehhhcCCccc---------ccc-----------------------------chhhc
Confidence 111 223334433 46789999999999875210 000 00000
Q ss_pred ccccCcccccccccCCCccccHHHHHHHHhcCCeEEE--eCCCCCeeEeecCCCHHHHHHHHHHhhhhhHH
Q 008144 424 YEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTY--LTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTD 492 (576)
Q Consensus 424 ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y--~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G~~q 492 (576)
|..++... ..+....+++||++++++|..+||++.| ++ ++.+++++|+|++++++||+||++|.+.
T Consensus 176 ~~~~~~~~-~~~~~~~~~~ED~~l~~~l~~~G~~~~~~~~~--~a~~~~~~p~s~~~~~~QR~RW~~g~~~ 243 (244)
T cd04190 176 YLTNTVDS-LHKKNNLDLGEDRILCTLLLKAGPKRKYLYVP--GAVAETDVPETFVELLSQRRRWINSTIA 243 (244)
T ss_pred cccCcccc-hHHHHHHhHhcccceeHHHhccCCccEEEEec--ccEEEEECCCCHHHHHHHhHhhhccccc
Confidence 10011000 0123345789999999999999999999 76 6999999999999999999999999864
No 28
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=99.95 E-value=1.4e-27 Score=231.20 Aligned_cols=193 Identities=16% Similarity=0.191 Sum_probs=154.5
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCccc
Q 008144 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (576)
Q Consensus 95 P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~ 174 (576)
|.|+|+||+|| |+. .+.++|.|+++++||. ++|+|+|||++|.|.+.+.+..+ +
T Consensus 1 p~vsviip~~n---~~~-~l~~~L~sl~~q~~~~--~eiivVdd~s~d~t~~~~~~~~~----------~---------- 54 (196)
T cd02520 1 PGVSILKPLCG---VDP-NLYENLESFFQQDYPK--YEILFCVQDEDDPAIPVVRKLIA----------K---------- 54 (196)
T ss_pred CCeEEEEecCC---CCc-cHHHHHHHHHhccCCC--eEEEEEeCCCcchHHHHHHHHHH----------H----------
Confidence 78999999999 553 5899999999999997 99999999999988653332110 0
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEEE
Q 008144 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYV 254 (576)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv 254 (576)
+|.+ ++.++
T Consensus 55 ------------------------------------------------~~~~-----------------------~~~~~ 63 (196)
T cd02520 55 ------------------------------------------------YPNV-----------------------DARLL 63 (196)
T ss_pred ------------------------------------------------CCCC-----------------------cEEEE
Confidence 0100 24455
Q ss_pred eccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCcceEEEcccceeccCCccC
Q 008144 255 SREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYD 334 (576)
Q Consensus 255 ~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d 334 (576)
...++.| ..+|++|+|.|++. +++|+++++|+|+.++ |++|.+++..+.+|+ +++|++.
T Consensus 64 ~~~~~~g--~~~~~~~~n~g~~~----a~~d~i~~~D~D~~~~-~~~l~~l~~~~~~~~----~~~v~~~---------- 122 (196)
T cd02520 64 IGGEKVG--INPKVNNLIKGYEE----ARYDILVISDSDISVP-PDYLRRMVAPLMDPG----VGLVTCL---------- 122 (196)
T ss_pred ecCCcCC--CCHhHHHHHHHHHh----CCCCEEEEECCCceEC-hhHHHHHHHHhhCCC----CCeEEee----------
Confidence 4443222 23699999999999 8999999999999997 999999999988887 5566543
Q ss_pred hHHHHHHHHHHHHHHHHhhcCCccccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCCCCCchhHHH
Q 008144 335 IYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQE 414 (576)
Q Consensus 335 ~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (576)
+..|+++++||+++..+
T Consensus 123 -----------------------~~~g~~~~~r~~~~~~~---------------------------------------- 139 (196)
T cd02520 123 -----------------------CAFGKSMALRREVLDAI---------------------------------------- 139 (196)
T ss_pred -----------------------cccCceeeeEHHHHHhc----------------------------------------
Confidence 46788999999999865
Q ss_pred hhcccccccccccCcccccccccC--CCccccHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHHHHHHHhhhh
Q 008144 415 ETGVLASCSYEHQTKWGEEVGILY--QSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSG 489 (576)
Q Consensus 415 ~a~~v~~c~ye~~t~wg~~~G~~~--~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G 489 (576)
+||+. ..+.||+++++++..+||++.|++ ++.++...|.+++++++||.||++.
T Consensus 140 -------------------ggf~~~~~~~~eD~~l~~rl~~~G~~i~~~~--~~~~~~~~~~~~~~~~~q~~rw~~~ 195 (196)
T cd02520 140 -------------------GGFEAFADYLAEDYFLGKLIWRLGYRVVLSP--YVVMQPLGSTSLASFWRRQLRWSRT 195 (196)
T ss_pred -------------------cChHHHhHHHHHHHHHHHHHHHcCCeEEEcc--hheeccCCcccHHHHHHHHHHHhcc
Confidence 46653 346899999999999999999997 5889999999999999999999874
No 29
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.95 E-value=1.8e-26 Score=225.07 Aligned_cols=221 Identities=20% Similarity=0.216 Sum_probs=164.6
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCccccccc
Q 008144 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (576)
Q Consensus 99 V~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (576)
|+||+|| |+ +.+.+||.|++.++||.++++|+|+|||++|.|.+.+....+
T Consensus 1 viip~~n---~~-~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~------------------------- 51 (229)
T cd04192 1 VVIAARN---EA-ENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILEFAAA------------------------- 51 (229)
T ss_pred CEEEecC---cH-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHHHHHh-------------------------
Confidence 6899999 65 689999999999999998899999999999987543220000
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEEEeccC
Q 008144 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (576)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv~Rek 258 (576)
...+++.++.++.
T Consensus 52 -------------------------------------------------------------------~~~~~v~~~~~~~ 64 (229)
T cd04192 52 -------------------------------------------------------------------KPNFQLKILNNSR 64 (229)
T ss_pred -------------------------------------------------------------------CCCcceEEeeccC
Confidence 0113466665542
Q ss_pred CCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCcceEEEcccceeccCCccChHHH
Q 008144 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDG 338 (576)
Q Consensus 259 rpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~~~ 338 (576)
+ ...||+.|+|.|+.. +++++|+++|+|+++. |++|.+++..+.++. .+.|+++..+.. .+.+..
T Consensus 65 -~--~~~g~~~a~n~g~~~----~~~d~i~~~D~D~~~~-~~~l~~l~~~~~~~~----~~~v~~~~~~~~---~~~~~~ 129 (229)
T cd04192 65 -V--SISGKKNALTTAIKA----AKGDWIVTTDADCVVP-SNWLLTFVAFIQKEQ----IGLVAGPVIYFK---GKSLLA 129 (229)
T ss_pred -c--ccchhHHHHHHHHHH----hcCCEEEEECCCcccC-HHHHHHHHHHhhcCC----CcEEeeeeeecC---CccHHH
Confidence 1 347999999999999 8999999999999997 999999999887655 456777766542 122211
Q ss_pred HHHHH----HHHHHHHHhhcCCc-cccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCCCCCchhHH
Q 008144 339 RFRSA----YCVQWQGMDGLKGP-VLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQ 413 (576)
Q Consensus 339 ~~~~f----~~~~~~g~d~~~g~-~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (576)
....+ ......+...++.+ .++|++.++||+++..+
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~~--------------------------------------- 170 (229)
T cd04192 130 KFQRLDWLSLLGLIAGSFGLGKPFMCNGANMAYRKEAFFEV--------------------------------------- 170 (229)
T ss_pred HHHHHHHHHHHHHHhhHHHhcCccccccceEEEEHHHHHHh---------------------------------------
Confidence 11111 11122223344444 45788889999999865
Q ss_pred HhhcccccccccccCcccccccccC--CCccccHHHHHHHHhcCC-eEEEeCCCCCeeEeecCCCHHHHHHHHHHhhhh
Q 008144 414 EETGVLASCSYEHQTKWGEEVGILY--QSVSEDLFTGFILHCKGW-TSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSG 489 (576)
Q Consensus 414 ~~a~~v~~c~ye~~t~wg~~~G~~~--~sitED~~t~~rl~~~Gw-rs~y~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G 489 (576)
+||++ ...+||.++.+++.++|| ++.|++......+...|.+++++++||+||++|
T Consensus 171 --------------------ggf~~~~~~~~eD~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~Rw~~g 229 (229)
T cd04192 171 --------------------GGFEGNDHIASGDDELLLAKVASKYPKVAYLKNPEALVTTQPVTSWKELLNQRKRWASK 229 (229)
T ss_pred --------------------cCCccccccccCCHHHHHHHHHhCCCCEEEeeCcchheecCCchhHHHHHHHHHHhhcC
Confidence 57864 366899999999999999 999885435788899999999999999999987
No 30
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.95 E-value=1.2e-25 Score=254.14 Aligned_cols=268 Identities=18% Similarity=0.204 Sum_probs=179.6
Q ss_pred HHHHHHHHHHHHHhhhccccccCCC---CCCCCCCCCCceEEEEecCCCCCCChHHHHHHHHHHH-cCCCCCCceEEEE-
Q 008144 61 ELLLSFIWLLGRAYLWRPVSRTVFP---ERLPEDDKLPAIDVFICTADPEKEPAIGVMNTVLSAM-ALDYPVDKLHVYL- 135 (576)
Q Consensus 61 E~~~~~~~~l~~~~~~~p~~r~~~~---~~l~~~~~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~-~ldYP~~kl~V~V- 135 (576)
+++.=..|++-.+.+...+.|...+ +.+. ..+.|.|+|+||+|| |. ++|.+||.+++ ++|||. ++|+|
T Consensus 35 dl~~d~~yw~r~~~r~~~~~~~~~~~~~~~l~-~~~~~~vsIlVPa~n---E~-~VI~~~v~~ll~~ldYp~--~~I~v~ 107 (703)
T PRK15489 35 DLFIDAWYWVRELYRWLTRERRYRPLTAEQLR-ERDEQPLAIMVPAWK---EY-DVIAKMIENMLATLDYRR--YVIFVG 107 (703)
T ss_pred HHHHHHHHHHHHHHHhhhccccCCCCChHHhc-ccCCCceEEEEeCCC---cH-HHHHHHHHHHHhcCCCCC--eEEEEE
Confidence 4444444444444554444433111 1222 356799999999999 66 69999999986 889996 89999
Q ss_pred --EcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhh
Q 008144 136 --SDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVE 213 (576)
Q Consensus 136 --~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~ 213 (576)
.||| .|..++.+.+
T Consensus 108 ~~~nD~---~T~~~~~~~~------------------------------------------------------------- 123 (703)
T PRK15489 108 TYPNDA---ETITEVERMR------------------------------------------------------------- 123 (703)
T ss_pred ecCCCc---cHHHHHHHHh-------------------------------------------------------------
Confidence 4676 4433222211
Q ss_pred cCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHHcC--C-CCCCCE--EE
Q 008144 214 DGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSG--V-ISNSPY--IL 288 (576)
Q Consensus 214 ~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv~Rekrpg~~~~~KAgALN~aL~~~~--~-~s~ge~--Il 288 (576)
..+|+++.|..+.+ ...+||.|||.++...- + ...++| |+
T Consensus 124 --------------------------------~~~p~~~~v~~~~~---gp~gKa~ALN~~l~~~~~~e~~~~~~fa~vv 168 (703)
T PRK15489 124 --------------------------------RRYKRLVRVEVPHD---GPTCKADCLNWIIQAIFRYEAGHGIEFAGVI 168 (703)
T ss_pred --------------------------------ccCCcEEEEEcCCC---CCCCHHHHHHHHHHHHHhhhhhccCccceEE
Confidence 01244555554332 24789999999998731 0 113344 99
Q ss_pred EeCCCCCCCchHHHHHHHHHhcCCCCCcceEEEcccceeccCCccCh----HHHHHHHHHHHHHHHHhhcCCcc-ccccc
Q 008144 289 GLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDI----YDGRFRSAYCVQWQGMDGLKGPV-LSGTG 363 (576)
Q Consensus 289 ~lDAD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~----~~~~~~~f~~~~~~g~d~~~g~~-~~Gtg 363 (576)
++|||.+++ |++|+.+ .++.+.. .+||.|-.-...+.... |..++...+...+.+++.+++++ .+|+|
T Consensus 169 i~DAEd~~~-P~~L~~~-~~~~~~~-----~~iQ~pV~~~~~~~~~~l~~~~~~Efa~~~~~~l~~r~~l~~~ipl~Gv~ 241 (703)
T PRK15489 169 LHDSEDVLH-PLELKYF-NYLLPRK-----DLVQLPVLSLERKWYEWVAGTYMDEFAEWHQKDLVVRESLTGTVPSAGVG 241 (703)
T ss_pred EEcCCCCCC-hhHHHHH-HhhcCCc-----ceeeeeeccCCCccccHHHHHHHHHHHHHhhhHHHHHHHcCCceeccCcc
Confidence 999999997 9999754 6665332 36887732221122222 33344445666678888999887 68999
Q ss_pred eEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCCCCCchhHHHhhcccccccccccCcccccccccCCCccc
Q 008144 364 YYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSE 443 (576)
Q Consensus 364 ~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~~G~~~~sitE 443 (576)
++|||++|..+ +++ |.-.+|+.+|+||
T Consensus 242 ~~frr~aL~~l--------------------------------------~~~---------------gg~~~~n~~sLTE 268 (703)
T PRK15489 242 TCFSRRALLAL--------------------------------------MKE---------------RGNQPFNTSSLTE 268 (703)
T ss_pred eeeeHHHHHHH--------------------------------------HHh---------------cCCCCCCCCCchH
Confidence 99999998753 000 0001588899999
Q ss_pred cHHHHHHHHhcCCeEEEeCC---------------------CCCeeEeecCCCHHHHHHHHHHhhhhhH-HHH
Q 008144 444 DLFTGFILHCKGWTSTYLTP---------------------FRPQFLGTSTTNLNDLLIQGTRWGSGLT-DVG 494 (576)
Q Consensus 444 D~~t~~rl~~~Gwrs~y~~~---------------------~~~~~~g~aP~tl~~~l~Qr~RWa~G~~-qv~ 494 (576)
|+++|+||+++||++.|+-- ...+..+..|.|+++.++||.||..|.. |-.
T Consensus 269 D~Dlg~RL~~~G~r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~tre~fP~~~~a~~rQk~RW~~Gi~~q~~ 341 (703)
T PRK15489 269 DYDFSFRLAELGMQEIFVRFPVQFRVRRTSWFGPRRERTREMLLCVREYFPDTFRTAYRQKARWVLGIAFQGW 341 (703)
T ss_pred hHHHHHHHHHCCCceEEEEEeccccccccccccccccccccCceeehhhCcHHHHHHHHHHHHHHhHHHHhhH
Confidence 99999999999999999210 1256678899999999999999999988 553
No 31
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=99.94 E-value=7.7e-26 Score=222.87 Aligned_cols=229 Identities=18% Similarity=0.152 Sum_probs=164.4
Q ss_pred ceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCcccc
Q 008144 96 AIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAY 175 (576)
Q Consensus 96 ~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~y 175 (576)
+|+|+||||| |+++.+.+||.++.+++ | .+|+|+|||++|.|.+.+.+..
T Consensus 1 ~isVvIp~~n---e~~~~l~~~l~sl~~q~-~---~eiivvdd~s~d~~~~~l~~~~----------------------- 50 (235)
T cd06434 1 DVTVIIPVYD---EDPDVFRECLRSILRQK-P---LEIIVVTDGDDEPYLSILSQTV----------------------- 50 (235)
T ss_pred CeEEEEeecC---CChHHHHHHHHHHHhCC-C---CEEEEEeCCCChHHHHHHHhhc-----------------------
Confidence 4899999999 77679999999999999 4 6999999999997654331100
Q ss_pred cccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEEEe
Q 008144 176 FSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVS 255 (576)
Q Consensus 176 f~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv~ 255 (576)
..+.+.++.
T Consensus 51 -----------------------------------------------------------------------~~~~~~v~~ 59 (235)
T cd06434 51 -----------------------------------------------------------------------KYGGIFVIT 59 (235)
T ss_pred -----------------------------------------------------------------------cCCcEEEEe
Confidence 012244443
Q ss_pred ccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCcceEEEcccceeccCCccCh
Q 008144 256 REKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDI 335 (576)
Q Consensus 256 Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~ 335 (576)
++ ++||++|+|.|++. +++|+|+++|+|+.+. |++|++++..|.|++ ++.|++.+.+.+.. ...
T Consensus 60 -~~-----~~g~~~a~n~g~~~----a~~d~v~~lD~D~~~~-~~~l~~l~~~~~~~~----v~~v~~~~~~~~~~-~~~ 123 (235)
T cd06434 60 -VP-----HPGKRRALAEGIRH----VTTDIVVLLDSDTVWP-PNALPEMLKPFEDPK----VGGVGTNQRILRPR-DSK 123 (235)
T ss_pred -cC-----CCChHHHHHHHHHH----hCCCEEEEECCCceeC-hhHHHHHHHhccCCC----EeEEcCceEeecCc-ccH
Confidence 22 46899999999999 8999999999999998 999999999998877 78898887776542 122
Q ss_pred HHHHHHHHHHHH----HHHHhhcCCc-cccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCCCCCch
Q 008144 336 YDGRFRSAYCVQ----WQGMDGLKGP-VLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSN 410 (576)
Q Consensus 336 ~~~~~~~f~~~~----~~g~d~~~g~-~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (576)
+......++... .......++. .+.|.+.++||+++..++...++...+
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~~~~~~~~~~~~-------------------------- 177 (235)
T cd06434 124 WSFLAAEYLERRNEEIRAAMSYDGGVPCLSGRTAAYRTEILKDFLFLEEFTNET-------------------------- 177 (235)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCEEEccCcHHHHHHHHHhhhhhHHHhhhhh--------------------------
Confidence 222212222211 1222233333 345677789999997653211110000
Q ss_pred hHHHhhcccccccccccCcccccccccCCCccccHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHHHHHHHhhhhh
Q 008144 411 VLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGL 490 (576)
Q Consensus 411 ~~~~~a~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G~ 490 (576)
+ +|+. ....||.+++.+++++||++.|++ .+.++...|.++.++++||.||++|.
T Consensus 178 --------------------~--~~~~-~~~~eD~~l~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~q~~Rw~~~~ 232 (235)
T cd06434 178 --------------------F--MGRR-LNAGDDRFLTRYVLSHGYKTVYQY--TSEAYTETPENYKKFLKQQLRWSRSN 232 (235)
T ss_pred --------------------h--cCCC-CCcCchHHHHHHHHHCCCeEEEec--CCeEEEEcchhHHHHHHHhhhhhhcc
Confidence 0 1222 356899999999999999999998 58889999999999999999999997
Q ss_pred HH
Q 008144 491 TD 492 (576)
Q Consensus 491 ~q 492 (576)
.+
T Consensus 233 ~~ 234 (235)
T cd06434 233 WR 234 (235)
T ss_pred cC
Confidence 53
No 32
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=99.94 E-value=8.7e-26 Score=225.25 Aligned_cols=226 Identities=18% Similarity=0.213 Sum_probs=165.9
Q ss_pred CCCCCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCc
Q 008144 89 PEDDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIK 168 (576)
Q Consensus 89 ~~~~~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~ 168 (576)
+..+..|.|+|+||+|| |+ ..+.++|.|+.+++||.++++|+|+|||++|.|.+.+.+
T Consensus 23 ~~~~~~~~isVvip~~n---~~-~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~------------------ 80 (251)
T cd06439 23 PDPAYLPTVTIIIPAYN---EE-AVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIARE------------------ 80 (251)
T ss_pred CCCCCCCEEEEEEecCC---cH-HHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHH------------------
Confidence 33466899999999999 55 589999999999999998899999999999987542221
Q ss_pred cCCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCC
Q 008144 169 TICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEM 248 (576)
Q Consensus 169 ~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~ 248 (576)
+.+ .
T Consensus 81 --------------------------------~~~-------------------------------------------~- 84 (251)
T cd06439 81 --------------------------------YAD-------------------------------------------K- 84 (251)
T ss_pred --------------------------------Hhh-------------------------------------------C-
Confidence 000 0
Q ss_pred CcEEEEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCcceEEEcccceec
Q 008144 249 PLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFH 328 (576)
Q Consensus 249 P~l~yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~ 328 (576)
++.++..++ +.||++|+|.|++. +++|+|+++|+|+++. |+++.+++..+.+++ +++|++.....
T Consensus 85 -~v~~i~~~~-----~~g~~~a~n~gi~~----a~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~~----~~~v~~~~~~~ 149 (251)
T cd06439 85 -GVKLLRFPE-----RRGKAAALNRALAL----ATGEIVVFTDANALLD-PDALRLLVRHFADPS----VGAVSGELVIV 149 (251)
T ss_pred -cEEEEEcCC-----CCChHHHHHHHHHH----cCCCEEEEEccccCcC-HHHHHHHHHHhcCCC----ccEEEeEEEec
Confidence 245554443 36899999999999 8899999999999998 999999999998776 56777665554
Q ss_pred cCCccChHHHH-HHHHHHHHHHHHhhcCCc-cccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCCC
Q 008144 329 NINKYDIYDGR-FRSAYCVQWQGMDGLKGP-VLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGE 406 (576)
Q Consensus 329 n~~~~d~~~~~-~~~f~~~~~~g~d~~~g~-~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~ 406 (576)
+.+. ...... ...+...........+.. ...|++.++||+++.
T Consensus 150 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~---------------------------------- 194 (251)
T cd06439 150 DGGG-SGSGEGLYWKYENWLKRAESRLGSTVGANGAIYAIRRELFR---------------------------------- 194 (251)
T ss_pred CCcc-cchhHHHHHHHHHHHHHHHHhcCCeeeecchHHHhHHHHhc----------------------------------
Confidence 3221 111111 111111111111222222 234555568888874
Q ss_pred CCchhHHHhhcccccccccccCcccccccccCCCccccHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHHHHHHHh
Q 008144 407 NFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRW 486 (576)
Q Consensus 407 ~~~~~~~~~a~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~RW 486 (576)
||+.....||++++.++..+||++.|.+ .+..+...|.+..++++|+.||
T Consensus 195 ----------------------------~~~~~~~~eD~~l~~~~~~~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~r~ 244 (251)
T cd06439 195 ----------------------------PLPADTINDDFVLPLRIARQGYRVVYEP--DAVAYEEVAEDGSEEFRRRVRI 244 (251)
T ss_pred ----------------------------CCCcccchhHHHHHHHHHHcCCeEEecc--ccEEEEeCcccHHHHHHHHHHH
Confidence 3444556799999999999999999997 5889999999999999999999
Q ss_pred hhhhHH
Q 008144 487 GSGLTD 492 (576)
Q Consensus 487 a~G~~q 492 (576)
+.|++|
T Consensus 245 ~~g~~~ 250 (251)
T cd06439 245 AAGNLQ 250 (251)
T ss_pred Hhcccc
Confidence 999987
No 33
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=99.93 E-value=2.3e-23 Score=223.41 Aligned_cols=231 Identities=19% Similarity=0.123 Sum_probs=158.9
Q ss_pred CCCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccC
Q 008144 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI 170 (576)
Q Consensus 91 ~~~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r 170 (576)
++..|+|+|+||+|| |+ +.+.+++.|+++++||. .++|+|+||||+|.|.+.+.+..+
T Consensus 36 ~~~~p~VSVIIpa~N---e~-~~L~~~L~sL~~q~yp~-~~eIIVVDd~StD~T~~i~~~~~~----------------- 93 (384)
T TIGR03469 36 PEAWPAVVAVVPARN---EA-DVIGECVTSLLEQDYPG-KLHVILVDDHSTDGTADIARAAAR----------------- 93 (384)
T ss_pred CCCCCCEEEEEecCC---cH-hHHHHHHHHHHhCCCCC-ceEEEEEeCCCCCcHHHHHHHHHH-----------------
Confidence 457899999999999 65 58999999999999996 499999999999988653332110
Q ss_pred CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCc
Q 008144 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPL 250 (576)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~ 250 (576)
. +| ..++
T Consensus 94 -----------------------------~----------------------~~----------------------~~~~ 100 (384)
T TIGR03469 94 -----------------------------A----------------------YG----------------------RGDR 100 (384)
T ss_pred -----------------------------h----------------------cC----------------------CCCc
Confidence 0 00 0114
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHHcCCCCC-----CCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCcceEEEcccc
Q 008144 251 LVYVSREKRPEHLHHFKAGALNVLLRVSGVISN-----SPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQ 325 (576)
Q Consensus 251 l~yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~-----ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq 325 (576)
+.++..+.+|. ...||+.|+|.|++. ++ +|+++++|+|+.++ |+++++++..+.+++. ++|....
T Consensus 101 i~vi~~~~~~~-g~~Gk~~A~n~g~~~----A~~~~~~gd~llflDaD~~~~-p~~l~~lv~~~~~~~~----~~vs~~~ 170 (384)
T TIGR03469 101 LTVVSGQPLPP-GWSGKLWAVSQGIAA----ARTLAPPADYLLLTDADIAHG-PDNLARLVARARAEGL----DLVSLMV 170 (384)
T ss_pred EEEecCCCCCC-CCcchHHHHHHHHHH----HhccCCCCCEEEEECCCCCCC-hhHHHHHHHHHHhCCC----CEEEecc
Confidence 56665433322 346899999999999 66 99999999999997 9999999999886653 3443333
Q ss_pred eeccCCccChHHHHH----HHHHHHHH---HHHhhcC-CccccccceEEEcccccccccchhhhhhhcChhHHHHhHHhh
Q 008144 326 KFHNINKYDIYDGRF----RSAYCVQW---QGMDGLK-GPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQS 397 (576)
Q Consensus 326 ~f~n~~~~d~~~~~~----~~f~~~~~---~g~d~~~-g~~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~ 397 (576)
++.. .+.+.... ..++.... ...+... .....|.+.++||++++.+
T Consensus 171 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~lirr~~~~~v----------------------- 224 (384)
T TIGR03469 171 RLRC---ESFWEKLLIPAFVFFFQKLYPFRWVNDPRRRTAAAAGGCILIRREALERI----------------------- 224 (384)
T ss_pred cccC---CCHHHHHHHHHHHHHHHHhcchhhhcCCCccceeecceEEEEEHHHHHHc-----------------------
Confidence 2221 12221111 11111110 0111111 1224688889999999876
Q ss_pred hhcccCCCCCCchhHHHhhcccccccccccCcccccccccC--CCccccHHHHHHHHhcCCeEEEeCCCCCeeEeecCCC
Q 008144 398 YKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILY--QSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTN 475 (576)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~~G~~~--~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~t 475 (576)
|||+. ..+.||++++.++.++|+++.+... ........-++
T Consensus 225 ------------------------------------GGf~~~~~~~~ED~~L~~r~~~~G~~v~~~~~-~~~~s~r~~~~ 267 (384)
T TIGR03469 225 ------------------------------------GGIAAIRGALIDDCTLAAAVKRSGGRIWLGLA-ARTRSLRPYDG 267 (384)
T ss_pred ------------------------------------CCHHHHhhCcccHHHHHHHHHHcCCcEEEEec-CceEEEEecCC
Confidence 56654 4678999999999999999999864 23334445569
Q ss_pred HHHHHHHHHHhhhh
Q 008144 476 LNDLLIQGTRWGSG 489 (576)
Q Consensus 476 l~~~l~Qr~RWa~G 489 (576)
+++.++|+.||..-
T Consensus 268 ~~~~~~~~~r~~~~ 281 (384)
T TIGR03469 268 LGEIWRMIARTAYT 281 (384)
T ss_pred HHHHHHHHHHhHHH
Confidence 99999999999543
No 34
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.90 E-value=2.6e-21 Score=205.90 Aligned_cols=283 Identities=17% Similarity=0.151 Sum_probs=203.6
Q ss_pred CCceEEEEecCCCCCCChHHHHHHHH----HHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCcc
Q 008144 94 LPAIDVFICTADPEKEPAIGVMNTVL----SAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKT 169 (576)
Q Consensus 94 ~P~VdV~Iptyn~~~E~~~~v~~Tv~----s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~ 169 (576)
+-+-.|++|+|| |++.-|..-++ |+.+ .=-.+.+.++|+.|..+++- ++.|. +.|..+|++.+=
T Consensus 143 ~hrTAilmPiyn---Ed~~rVfAgLrA~~eSla~-Tg~~~~FD~FVLSDs~dpdi--alAEq----~a~~~l~~e~~g-- 210 (736)
T COG2943 143 LHRTAILMPIYN---EDVNRVFAGLRATYESLAA-TGHAEHFDFFVLSDSRDPDI--ALAEQ----KAWAELCRELGG-- 210 (736)
T ss_pred ccceeEEeeccc---cCHHHHHHHHHHHHHHHHh-hCCcccceEEEEcCCCCchh--hhhHH----HHHHHHHHHhCC--
Confidence 446889999999 88876654444 4433 33345799999999999854 34443 345555655431
Q ss_pred CCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCC
Q 008144 170 ICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMP 249 (576)
Q Consensus 170 r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P 249 (576)
+ -
T Consensus 211 --------------------------------------------~----------------------------------~ 212 (736)
T COG2943 211 --------------------------------------------E----------------------------------G 212 (736)
T ss_pred --------------------------------------------C----------------------------------C
Confidence 0 1
Q ss_pred cEEEEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc-CCCCCcceEEEcccceec
Q 008144 250 LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFH 328 (576)
Q Consensus 250 ~l~yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~-Dp~~g~~vg~VQ~pq~f~ 328 (576)
++.|-.|.+ |.+.||||+....+..| +.+++++++|||+++. +|.+-+++.-+. ||+ .|++||-....
T Consensus 213 ~ifYRrRr~----n~~RKaGNIaDfcrRwG--~~Y~~MlVLDADSvMt-gd~lvrLv~~ME~~P~----aGlIQt~P~~~ 281 (736)
T COG2943 213 NIFYRRRRR----NVKRKAGNIADFCRRWG--SAYSYMLVLDADSVMT-GDCLVRLVRLMEANPD----AGLIQTSPKAS 281 (736)
T ss_pred ceeeehHhh----hhcccccCHHHHHHHhC--cccceEEEeecccccC-chHHHHHHHHHhhCCC----Cceeecchhhc
Confidence 355554444 56789999999999988 8999999999999998 999999998887 898 78999977666
Q ss_pred cCCccChHHHHH----HHHHHHHHHHHhhcCCc--cccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhccc
Q 008144 329 NINKYDIYDGRF----RSAYCVQWQGMDGLKGP--VLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNN 402 (576)
Q Consensus 329 n~~~~d~~~~~~----~~f~~~~~~g~d~~~g~--~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~ 402 (576)
|. +..|++-+ ++|-.+...|..-|++. .|-|.|+++|.+++.+-+. ++.+.|
T Consensus 282 gg--~TL~AR~qQFatrvYGpl~~~GLawW~~~Es~yWGHNAIIRt~aF~~hcg------------------Lp~LpG-- 339 (736)
T COG2943 282 GG--DTLYARCQQFATRVYGPLFTAGLAWWQLGESHYWGHNAIIRTKAFIEHCG------------------LPPLPG-- 339 (736)
T ss_pred Cc--chHHHHHHHHHHHHhchHHhhhhHHHhccccccccccceeechhhHHhcC------------------CCCCCC--
Confidence 54 35555443 23444566788877764 6899999999999854321 011111
Q ss_pred CCCCCCchhHHHhhcccccccccccCcccccccccCCCccccHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHHHH
Q 008144 403 ANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQ 482 (576)
Q Consensus 403 ~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Q 482 (576)
++.|....++.|+..+-.|.+.||.+--.+ +-.-+|++.|+|+.+++++
T Consensus 340 ------------------------------~~pFgG~ilSHDfvEAALmRRaGW~v~ia~-dL~GSyEE~PpnLlD~l~R 388 (736)
T COG2943 340 ------------------------------RGPFGGHILSHDFVEAALMRRAGWGVWIAY-DLDGSYEELPPNLLDELKR 388 (736)
T ss_pred ------------------------------CCCCCccccchHHHHHHHHhhcCceEEEec-cCCCchhhCCchHHHHHhh
Confidence 245888899999999999999999865443 3578999999999999999
Q ss_pred HHHhhhhhHHHHhhhcCCcccCCCCCCHHHHHHHHhHhHhhHHhHHHHHHHHHHH
Q 008144 483 GTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLP 537 (576)
Q Consensus 483 r~RWa~G~~qv~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~~~~~~~~~~~~P 537 (576)
-+|||+|++|.+. ++. .+++++..|++++...+.+ +.+-.+++++++.
T Consensus 389 DRRWC~GNLqh~r-----l~~-~~GlHwvsR~h~~tGVmsY-lsaPlWfl~ll~g 436 (736)
T COG2943 389 DRRWCHGNLQHFR-----LFL-VKGLHWVSRAHFLTGVMSY-LSAPLWFLFLLLG 436 (736)
T ss_pred hhHhhhcchhhce-----eec-cCCccHHHHHHHHHHHHHH-HhhHHHHHHHHHH
Confidence 9999999999764 222 2368999998877755554 4443344443333
No 35
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=99.90 E-value=1.3e-22 Score=200.33 Aligned_cols=225 Identities=16% Similarity=0.090 Sum_probs=162.4
Q ss_pred ceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCcccc
Q 008144 96 AIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAY 175 (576)
Q Consensus 96 ~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~y 175 (576)
.|+|+||+|| |+ +.+.+++.++.+++||..+++|+|+|||++|.|.+.+.+..
T Consensus 1 ~~sIiip~~n---~~-~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~~~~~~~----------------------- 53 (249)
T cd02525 1 FVSIIIPVRN---EE-KYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQEYA----------------------- 53 (249)
T ss_pred CEEEEEEcCC---ch-hhHHHHHHHHHhccCCCCccEEEEEeCCCCccHHHHHHHHH-----------------------
Confidence 4899999999 65 57899999999999997789999999999997753222110
Q ss_pred cccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEEEe
Q 008144 176 FSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVS 255 (576)
Q Consensus 176 f~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv~ 255 (576)
...|.+.++.
T Consensus 54 ----------------------------------------------------------------------~~~~~v~~i~ 63 (249)
T cd02525 54 ----------------------------------------------------------------------AKDPRIRLID 63 (249)
T ss_pred ----------------------------------------------------------------------hcCCeEEEEe
Confidence 0023466665
Q ss_pred ccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCcceEEEcccceeccCCccCh
Q 008144 256 REKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDI 335 (576)
Q Consensus 256 Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~ 335 (576)
.+ .+++++|+|.|++. +++|+++++|+|.++. |++|.+++..+.++. +..|+++....+ .+.
T Consensus 64 ~~------~~~~~~a~N~g~~~----a~~d~v~~lD~D~~~~-~~~l~~~~~~~~~~~----~~~v~~~~~~~~---~~~ 125 (249)
T cd02525 64 NP------KRIQSAGLNIGIRN----SRGDIIIRVDAHAVYP-KDYILELVEALKRTG----ADNVGGPMETIG---ESK 125 (249)
T ss_pred CC------CCCchHHHHHHHHH----hCCCEEEEECCCccCC-HHHHHHHHHHHhcCC----CCEEecceecCC---CCh
Confidence 32 25789999999999 8999999999999997 999999998887765 334444432221 122
Q ss_pred HHHHHHHHHHH----HHHHHhhcC---CccccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCCCCC
Q 008144 336 YDGRFRSAYCV----QWQGMDGLK---GPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENF 408 (576)
Q Consensus 336 ~~~~~~~f~~~----~~~g~d~~~---g~~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~ 408 (576)
+.......+.. ......... ....+|.+.++||+++..+
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------- 171 (249)
T cd02525 126 FQKAIAVAQSSPLGSGGSAYRGGAVKIGYVDTVHHGAYRREVFEKV---------------------------------- 171 (249)
T ss_pred HHHHHHHHhhchhccCCccccccccccccccccccceEEHHHHHHh----------------------------------
Confidence 22111111111 000011111 2245677788999988754
Q ss_pred chhHHHhhcccccccccccCcccccccccCC-CccccHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHHHHHHHhh
Q 008144 409 SNVLQEETGVLASCSYEHQTKWGEEVGILYQ-SVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWG 487 (576)
Q Consensus 409 ~~~~~~~a~~v~~c~ye~~t~wg~~~G~~~~-sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~RWa 487 (576)
+||+.. ...||.+++++++++|+++.|++ ++.+....|.+++.+++|+.||.
T Consensus 172 -------------------------g~~~~~~~~~eD~~l~~r~~~~G~~~~~~~--~~~~~~~~~~s~~~~~~~~~r~~ 224 (249)
T cd02525 172 -------------------------GGFDESLVRNEDAELNYRLRKAGYKIWLSP--DIRVYYYPRSTLKKLARQYFRYG 224 (249)
T ss_pred -------------------------CCCCcccCccchhHHHHHHHHcCcEEEEcC--CeEEEEcCCCCHHHHHHHHHHHh
Confidence 345543 34699999999999999999998 58888889999999999999999
Q ss_pred hhhHHHHhh
Q 008144 488 SGLTDVGLS 496 (576)
Q Consensus 488 ~G~~qv~~~ 496 (576)
.|..|+...
T Consensus 225 ~~~~~~~~~ 233 (249)
T cd02525 225 KWRARTLRK 233 (249)
T ss_pred hhhHHHHHh
Confidence 999999874
No 36
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=99.85 E-value=1.4e-20 Score=181.94 Aligned_cols=167 Identities=17% Similarity=0.104 Sum_probs=121.7
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCccccccc
Q 008144 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (576)
Q Consensus 99 V~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (576)
|+||+|| |+ +.+.+||.|+++++ |. ++|+|+||||+|.|.+.+. ..
T Consensus 1 ViIp~~N---e~-~~l~~~l~sl~~~~-~~--~eIivvdd~S~D~t~~~~~-~~-------------------------- 46 (191)
T cd06436 1 VLVPCLN---EE-AVIQRTLASLLRNK-PN--FLVLVIDDASDDDTAGIVR-LA-------------------------- 46 (191)
T ss_pred CEEeccc---cH-HHHHHHHHHHHhCC-CC--eEEEEEECCCCcCHHHHHh-he--------------------------
Confidence 6899999 66 68999999999999 64 8999999999998854221 00
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEEEeccC
Q 008144 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (576)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv~Rek 258 (576)
...+++.++.++.
T Consensus 47 -------------------------------------------------------------------~~~~~v~~i~~~~ 59 (191)
T cd06436 47 -------------------------------------------------------------------ITDSRVHLLRRHL 59 (191)
T ss_pred -------------------------------------------------------------------ecCCcEEEEeccC
Confidence 0012466776542
Q ss_pred CCCCCCCChHHHHHHHHHHcCC-------CCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCcceEEEcccceeccCC
Q 008144 259 RPEHLHHFKAGALNVLLRVSGV-------ISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNIN 331 (576)
Q Consensus 259 rpg~~~~~KAgALN~aL~~~~~-------~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~ 331 (576)
. + .+.||++|+|.|++.+.. -.++|+|+++|+|++++ |++|+++..+|.||+ ++.||.+..+.|..
T Consensus 60 ~-~-~~~Gk~~aln~g~~~~~~~~~~~g~~~~~d~v~~~DaD~~~~-~~~l~~~~~~~~~~~----v~~v~~~~~~~~~~ 132 (191)
T cd06436 60 P-N-ARTGKGDALNAAYDQIRQILIEEGADPERVIIAVIDADGRLD-PNALEAVAPYFSDPR----VAGTQSRVRMYNRH 132 (191)
T ss_pred C-c-CCCCHHHHHHHHHHHHhhhccccccCCCccEEEEECCCCCcC-HhHHHHHHHhhcCCc----eEEEeeeEEEecCC
Confidence 1 1 246899999999998310 01358999999999997 999999888888887 78899998887753
Q ss_pred ccChHHHHH----HHHHHHHHHHHhhcCCccccccceEEEccccccc
Q 008144 332 KYDIYDGRF----RSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYAD 374 (576)
Q Consensus 332 ~~d~~~~~~----~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~AL~~i 374 (576)
. ..+..-+ ..++..++.++...+...++|+|+++||++|..+
T Consensus 133 ~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~G~~~~~r~~~l~~v 178 (191)
T cd06436 133 K-NLLTILQDLEFFIIIAATQSLRALTGTVGLGGNGQFMRLSALDGL 178 (191)
T ss_pred C-CHHHHHHHHHHHHHHHHHHHHHHhcCcEEECCeeEEEeHHHHHHh
Confidence 2 2222222 2223455667766665557999999999999865
No 37
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=99.85 E-value=8.1e-21 Score=181.65 Aligned_cols=163 Identities=20% Similarity=0.161 Sum_probs=114.0
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCccccccc
Q 008144 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (576)
Q Consensus 99 V~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (576)
|+||+|| |+ +.+.+||.++++++||.++++|+|+||||+|.|.+.+.+ ++
T Consensus 1 VvIp~~n---e~-~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t~~~~~~--------------~~------------ 50 (183)
T cd06438 1 ILIPAHN---EE-AVIGNTVRSLKAQDYPRELYRIFVVADNCTDDTAQVARA--------------AG------------ 50 (183)
T ss_pred CEEeccc---hH-HHHHHHHHHHHhcCCCCcccEEEEEeCCCCchHHHHHHH--------------cC------------
Confidence 6899999 66 689999999999999988899999999999987532110 00
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEEEeccC
Q 008144 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (576)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv~Rek 258 (576)
..++.+.+
T Consensus 51 ------------------------------------------------------------------------~~~~~~~~ 58 (183)
T cd06438 51 ------------------------------------------------------------------------ATVLERHD 58 (183)
T ss_pred ------------------------------------------------------------------------CeEEEeCC
Confidence 01122222
Q ss_pred CCCCCCCChHHHHHHHHHHcC-CCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCcceEEEcccceeccCCccChHH
Q 008144 259 RPEHLHHFKAGALNVLLRVSG-VISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYD 337 (576)
Q Consensus 259 rpg~~~~~KAgALN~aL~~~~-~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~~ 337 (576)
. .+.||++|+|.+++.+. .-+++|+++++|+|++++ |++|.+++..|.+.. ..||+.....+... ..+.
T Consensus 59 ~---~~~gk~~aln~g~~~a~~~~~~~d~v~~~DaD~~~~-p~~l~~l~~~~~~~~-----~~v~g~~~~~~~~~-~~~~ 128 (183)
T cd06438 59 P---ERRGKGYALDFGFRHLLNLADDPDAVVVFDADNLVD-PNALEELNARFAAGA-----RVVQAYYNSKNPDD-SWIT 128 (183)
T ss_pred C---CCCCHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCCC-hhHHHHHHHHHhhCC-----CeeEEEEeeeCCcc-CHHH
Confidence 1 34789999999998731 014699999999999998 999999999886432 35777665554321 2222
Q ss_pred HHHH----HHHHHHHHHHhhcCCc-cccccceEEEcccccc
Q 008144 338 GRFR----SAYCVQWQGMDGLKGP-VLSGTGYYIKRESLYA 373 (576)
Q Consensus 338 ~~~~----~f~~~~~~g~d~~~g~-~~~Gtg~~~RR~AL~~ 373 (576)
.... .++.....+...+++. .++|+|+++||++++.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~ 169 (183)
T cd06438 129 RLYAFAFLVFNRLRPLGRSNLGLSCQLGGTGMCFPWAVLRQ 169 (183)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeeecCchhhhHHHHHHh
Confidence 2222 2233344466667765 4789999999999963
No 38
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=99.81 E-value=5.7e-19 Score=169.91 Aligned_cols=137 Identities=27% Similarity=0.378 Sum_probs=112.4
Q ss_pred EEEEeCCCCCCCchHHHHHHHHHhcCCCCCcceEEEcccceeccCCccChHHHHHHHHHHH----HHHHHhhcCCc-ccc
Q 008144 286 YILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCV----QWQGMDGLKGP-VLS 360 (576)
Q Consensus 286 ~Il~lDAD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~~~~~~~f~~~----~~~g~d~~~g~-~~~ 360 (576)
+|+++|+|+.++ ||++++++.++.||+ +++||+|..+.|. ++.+.+.+..+|.. .....+..+.+ .++
T Consensus 1 ~v~~~DaDt~~~-~d~l~~~~~~~~~~~----~~~vq~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (193)
T PF13632_consen 1 YVLFLDADTRLP-PDFLERLVAALEDPK----VDAVQGPIIFRNR--GSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLS 73 (193)
T ss_pred CEEEEcCCCCCC-hHHHHHHHHHHhCCC----ceEEEccEEecCC--CChhheeehhhhhhhhhhhHHHHHhcCCCcccc
Confidence 589999999998 999999999998887 8999999998643 34444444444422 12233344444 478
Q ss_pred ccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCCCCCchhHHHhhcccccccccccCccccccccc-CC
Q 008144 361 GTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGIL-YQ 439 (576)
Q Consensus 361 Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~~G~~-~~ 439 (576)
|+|.++|++++.++ +||+ ..
T Consensus 74 G~~~~~r~~~l~~v-----------------------------------------------------------g~~~~~~ 94 (193)
T PF13632_consen 74 GSGMLFRREALREV-----------------------------------------------------------GGFDDPF 94 (193)
T ss_pred CcceeeeHHHHHHh-----------------------------------------------------------Ccccccc
Confidence 99999999999865 5888 88
Q ss_pred CccccHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHHHHHHHhhhhh
Q 008144 440 SVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGL 490 (576)
Q Consensus 440 sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G~ 490 (576)
+++||+++++++.++||++.|++ ++.+++++|+|+.++++||+||..|.
T Consensus 95 ~~~ED~~l~~~l~~~G~~~~~~~--~~~~~~~~p~t~~~~~~Qr~RW~~g~ 143 (193)
T PF13632_consen 95 SIGEDMDLGFRLRRAGYRIVYVP--DAIVYTEAPPTFRAFIRQRRRWARGA 143 (193)
T ss_pred cccchHHHHHHHHHCCCEEEEec--ccceeeeCCCCHHHHHHHHHHHHhhh
Confidence 99999999999999999999998 47889999999999999999999997
No 39
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.81 E-value=5.2e-19 Score=170.01 Aligned_cols=191 Identities=15% Similarity=0.107 Sum_probs=133.7
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCccc
Q 008144 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (576)
Q Consensus 95 P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~ 174 (576)
|.|+|+||+|| |+.+.+.+||.|+++++||. ++|+|+|||++|.|...+.+.
T Consensus 1 p~vsiii~~~n---~~~~~l~~~l~sl~~q~~~~--~eiivvd~gs~d~~~~~~~~~----------------------- 52 (202)
T cd04184 1 PLISIVMPVYN---TPEKYLREAIESVRAQTYPN--WELCIADDASTDPEVKRVLKK----------------------- 52 (202)
T ss_pred CeEEEEEeccc---CcHHHHHHHHHHHHhCcCCC--eEEEEEeCCCCChHHHHHHHH-----------------------
Confidence 68999999999 55468999999999999997 899999999998654322220
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEEE
Q 008144 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYV 254 (576)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv 254 (576)
|.+ ..+++.++
T Consensus 53 --------------------------~~~-------------------------------------------~~~~~~~~ 63 (202)
T cd04184 53 --------------------------YAA-------------------------------------------QDPRIKVV 63 (202)
T ss_pred --------------------------HHh-------------------------------------------cCCCEEEE
Confidence 100 01235555
Q ss_pred eccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHh-cCCCCCcceEEEcccceeccCCc-
Q 008144 255 SREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKISSSLAFVQFPQKFHNINK- 332 (576)
Q Consensus 255 ~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f-~Dp~~g~~vg~VQ~pq~f~n~~~- 332 (576)
..++ +.|++.|+|.|++. ++++|++++|+|..+. |++|.+++..+ .+|+ +++|.+.........
T Consensus 64 ~~~~-----~~g~~~a~n~g~~~----a~~d~i~~ld~D~~~~-~~~l~~~~~~~~~~~~----~~~v~~~~~~~~~~~~ 129 (202)
T cd04184 64 FREE-----NGGISAATNSALEL----ATGEFVALLDHDDELA-PHALYEVVKALNEHPD----ADLIYSDEDKIDEGGK 129 (202)
T ss_pred Eccc-----CCCHHHHHHHHHHh----hcCCEEEEECCCCcCC-hHHHHHHHHHHHhCCC----CCEEEccHHhccCCCC
Confidence 5443 46899999999999 8899999999999997 99999999988 6777 455554433222110
Q ss_pred -cChHHHHHHHHHHHHHHHHhhcCCccccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCCCCCchh
Q 008144 333 -YDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNV 411 (576)
Q Consensus 333 -~d~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (576)
..+..... +. .+......+.|++.++||+++..+
T Consensus 130 ~~~~~~~~~---~~-----~~~~~~~~~~~~~~~~~r~~~~~i------------------------------------- 164 (202)
T cd04184 130 RSEPFFKPD---WS-----PDLLLSQNYIGHLLVYRRSLVRQV------------------------------------- 164 (202)
T ss_pred EeccccCCC---CC-----HHHhhhcCCccceEeEEHHHHHHh-------------------------------------
Confidence 00000000 00 001111234567778999999765
Q ss_pred HHHhhcccccccccccCcccccccccCC-CccccHHHHHHHHhcCCeEEEeCC
Q 008144 412 LQEETGVLASCSYEHQTKWGEEVGILYQ-SVSEDLFTGFILHCKGWTSTYLTP 463 (576)
Q Consensus 412 ~~~~a~~v~~c~ye~~t~wg~~~G~~~~-sitED~~t~~rl~~~Gwrs~y~~~ 463 (576)
+||+.+ ...||+++++|+..+||++.|+++
T Consensus 165 ----------------------ggf~~~~~~~eD~~l~~rl~~~g~~~~~~~~ 195 (202)
T cd04184 165 ----------------------GGFREGFEGAQDYDLVLRVSEHTDRIAHIPR 195 (202)
T ss_pred ----------------------CCCCcCcccchhHHHHHHHHhccceEEEccH
Confidence 466654 357999999999999999999973
No 40
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.79 E-value=1.2e-18 Score=167.69 Aligned_cols=189 Identities=17% Similarity=0.141 Sum_probs=132.0
Q ss_pred EEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCcccccc
Q 008144 98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177 (576)
Q Consensus 98 dV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 177 (576)
+|+|||||+ |.++.+.+||.|+++++||. .+|+|+|||+++++...+.+
T Consensus 1 sviip~~n~--~~~~~l~~~l~Sl~~q~~~~--~eiiivdd~ss~d~t~~~~~--------------------------- 49 (201)
T cd04195 1 SVLMSVYIK--EKPEFLREALESILKQTLPP--DEVVLVKDGPVTQSLNEVLE--------------------------- 49 (201)
T ss_pred CEEEEcccc--chHHHHHHHHHHHHhcCCCC--cEEEEEECCCCchhHHHHHH---------------------------
Confidence 589999993 34578999999999999996 79999999995543222111
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEEEecc
Q 008144 178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSRE 257 (576)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv~Re 257 (576)
.|.+ ..| +.++..+
T Consensus 50 ----------------------~~~~-------------------------------------------~~~-i~~i~~~ 63 (201)
T cd04195 50 ----------------------EFKR-------------------------------------------KLP-LKVVPLE 63 (201)
T ss_pred ----------------------HHHh-------------------------------------------cCC-eEEEEcC
Confidence 0100 012 5667665
Q ss_pred CCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc-CCCCCcceEEEcccceeccCCccChH
Q 008144 258 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNINKYDIY 336 (576)
Q Consensus 258 krpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~-Dp~~g~~vg~VQ~pq~f~n~~~~d~~ 336 (576)
+ +.|+++|+|.|++. ++|+||+++|+|.++. |++|.+++..|. +|+ +++|.+.....+.+.....
T Consensus 64 ~-----n~G~~~a~N~g~~~----a~gd~i~~lD~Dd~~~-~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 129 (201)
T cd04195 64 K-----NRGLGKALNEGLKH----CTYDWVARMDTDDISL-PDRFEKQLDFIEKNPE----IDIVGGGVLEFDSDGNDIG 129 (201)
T ss_pred c-----cccHHHHHHHHHHh----cCCCEEEEeCCccccC-cHHHHHHHHHHHhCCC----eEEEcccEEEECCCCCeec
Confidence 4 36899999999999 8999999999999998 999999999886 666 5666665544332211110
Q ss_pred HH----HHHHHHHHHHHHHhhcCCccccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCCCCCchhH
Q 008144 337 DG----RFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVL 412 (576)
Q Consensus 337 ~~----~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (576)
.. .....+.. .. ....++|.+.++||+++..+
T Consensus 130 ~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~rr~~~~~~-------------------------------------- 165 (201)
T cd04195 130 KRRLPTSHDDILKF-----AR-RRSPFNHPTVMFRKSKVLAV-------------------------------------- 165 (201)
T ss_pred cccCCCCHHHHHHH-----hc-cCCCCCChHHhhhHHHHHHc--------------------------------------
Confidence 00 00011111 01 12224556678999998754
Q ss_pred HHhhcccccccccccCcccccccccCCCccccHHHHHHHHhcCCeEEEeC
Q 008144 413 QEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLT 462 (576)
Q Consensus 413 ~~~a~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~ 462 (576)
+||......||+++..++..+|+++.|++
T Consensus 166 ---------------------g~~~~~~~~eD~~~~~r~~~~g~~~~~~~ 194 (201)
T cd04195 166 ---------------------GGYQDLPLVEDYALWARMLANGARFANLP 194 (201)
T ss_pred ---------------------CCcCCCCCchHHHHHHHHHHcCCceeccc
Confidence 57777788999999999999999999987
No 41
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=99.77 E-value=1.4e-17 Score=172.07 Aligned_cols=112 Identities=19% Similarity=0.082 Sum_probs=89.6
Q ss_pred EEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCcccccc
Q 008144 98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177 (576)
Q Consensus 98 dV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 177 (576)
+|+||+|| |+++.+.+||.|++++++|....+|+|+||||+|.|.+.+.+..
T Consensus 1 SIIIp~~N---~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~------------------------- 52 (299)
T cd02510 1 SVIIIFHN---EALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEY------------------------- 52 (299)
T ss_pred CEEEEEec---CcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHH-------------------------
Confidence 58999999 66579999999999999987667999999999998764332200
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEEEecc
Q 008144 178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSRE 257 (576)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv~Re 257 (576)
. ....|++.++..+
T Consensus 53 -----------------------~-------------------------------------------~~~~~~v~vi~~~ 66 (299)
T cd02510 53 -----------------------Y-------------------------------------------KKYLPKVKVLRLK 66 (299)
T ss_pred -----------------------H-------------------------------------------hhcCCcEEEEEcC
Confidence 0 0012457777655
Q ss_pred CCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc-CCC
Q 008144 258 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPK 313 (576)
Q Consensus 258 krpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~-Dp~ 313 (576)
+ +.|++.|.|.|++. ++||||+++|+|+.+. |++|.+++..+. +|.
T Consensus 67 ~-----n~G~~~a~N~g~~~----A~gd~i~fLD~D~~~~-~~wL~~ll~~l~~~~~ 113 (299)
T cd02510 67 K-----REGLIRARIAGARA----ATGDVLVFLDSHCEVN-VGWLEPLLARIAENRK 113 (299)
T ss_pred C-----CCCHHHHHHHHHHH----ccCCEEEEEeCCcccC-ccHHHHHHHHHHhCCC
Confidence 4 37899999999999 8999999999999997 999999999886 444
No 42
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.75 E-value=2.5e-17 Score=156.49 Aligned_cols=186 Identities=17% Similarity=0.090 Sum_probs=128.5
Q ss_pred EEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCcccccc
Q 008144 98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177 (576)
Q Consensus 98 dV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 177 (576)
+|+||+|| ++ +.+.+++.|+.+++||. ++|+|+|||++|.|.+.+.+.
T Consensus 1 sivi~~~n---~~-~~l~~~l~sl~~q~~~~--~evivvDd~s~d~~~~~~~~~-------------------------- 48 (202)
T cd06433 1 SIITPTYN---QA-ETLEETIDSVLSQTYPN--IEYIVIDGGSTDGTVDIIKKY-------------------------- 48 (202)
T ss_pred CEEEeccc---hH-HHHHHHHHHHHhCCCCC--ceEEEEeCCCCccHHHHHHHh--------------------------
Confidence 58999999 65 68999999999999997 999999999999875422210
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEEEecc
Q 008144 178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSRE 257 (576)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv~Re 257 (576)
.. .+.++..+
T Consensus 49 ------------------------~~----------------------------------------------~~~~~~~~ 58 (202)
T cd06433 49 ------------------------ED----------------------------------------------KITYWISE 58 (202)
T ss_pred ------------------------Hh----------------------------------------------hcEEEEec
Confidence 00 01223333
Q ss_pred CCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHh-cCCCCCcceEEEcccceeccCCccChH
Q 008144 258 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKISSSLAFVQFPQKFHNINKYDIY 336 (576)
Q Consensus 258 krpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f-~Dp~~g~~vg~VQ~pq~f~n~~~~d~~ 336 (576)
+ ..|+++|+|.|++. ++++||+++|+|.++. ++.+.+++..+ .+++ .++|.+...+.+.+.....
T Consensus 59 ~-----~~g~~~a~n~~~~~----a~~~~v~~ld~D~~~~-~~~~~~~~~~~~~~~~----~~~v~g~~~~~~~~~~~~~ 124 (202)
T cd06433 59 P-----DKGIYDAMNKGIAL----ATGDIIGFLNSDDTLL-PGALLAVVAAFAEHPE----VDVVYGDVLLVDENGRVIG 124 (202)
T ss_pred C-----CcCHHHHHHHHHHH----cCCCEEEEeCCCcccC-chHHHHHHHHHHhCCC----ccEEEeeeEEEcCCCCccc
Confidence 2 36899999999999 8999999999999998 99999988444 4666 3455554443332211110
Q ss_pred HHHHHHHHHHHHHHHhhcCCccccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCCCCCchhHHHhh
Q 008144 337 DGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEET 416 (576)
Q Consensus 337 ~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 416 (576)
... ...............+|++.++||+++..+
T Consensus 125 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------ 157 (202)
T cd06433 125 RRR-----PPPFLDKFLLYGMPICHQATFFRRSLFEKY------------------------------------------ 157 (202)
T ss_pred CCC-----CcchhhhHHhhcCcccCcceEEEHHHHHHh------------------------------------------
Confidence 000 000011112233456778889999999765
Q ss_pred cccccccccccCcccccccccCC-CccccHHHHHHHHhcCCeEEEeCC
Q 008144 417 GVLASCSYEHQTKWGEEVGILYQ-SVSEDLFTGFILHCKGWTSTYLTP 463 (576)
Q Consensus 417 ~~v~~c~ye~~t~wg~~~G~~~~-sitED~~t~~rl~~~Gwrs~y~~~ 463 (576)
+||..+ ...||.++.+++..+|++++|++.
T Consensus 158 -----------------~~f~~~~~~~~D~~~~~r~~~~g~~~~~~~~ 188 (202)
T cd06433 158 -----------------GGFDESYRIAADYDLLLRLLLAGKIFKYLPE 188 (202)
T ss_pred -----------------CCCchhhCchhhHHHHHHHHHcCCceEecch
Confidence 345543 457999999999999999988873
No 43
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=99.75 E-value=1.5e-16 Score=159.30 Aligned_cols=203 Identities=12% Similarity=0.033 Sum_probs=127.8
Q ss_pred CCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCc
Q 008144 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (576)
Q Consensus 93 ~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p 172 (576)
..|.|+|+||+|| |. +.+..++.++.....+...++|+|+||||+|.|.+.+.+.++ +
T Consensus 7 ~~~~vsVvIp~yn---e~-~~l~~~l~~l~~~~~~~~~~eiivvDdgS~D~t~~i~~~~~~----------~-------- 64 (243)
T PLN02726 7 GAMKYSIIVPTYN---ER-LNIALIVYLIFKALQDVKDFEIIVVDDGSPDGTQDVVKQLQK----------V-------- 64 (243)
T ss_pred CCceEEEEEccCC---ch-hhHHHHHHHHHHHhccCCCeEEEEEeCCCCCCHHHHHHHHHH----------h--------
Confidence 4689999999999 54 467777777654322222599999999999998654332110 0
Q ss_pred ccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEE
Q 008144 173 QAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLV 252 (576)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~ 252 (576)
|. .+++.
T Consensus 65 ----------------------------~~---------------------------------------------~~~v~ 71 (243)
T PLN02726 65 ----------------------------YG---------------------------------------------EDRIL 71 (243)
T ss_pred ----------------------------cC---------------------------------------------CCcEE
Confidence 00 01355
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCcceEEEcccceeccCC-
Q 008144 253 YVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNIN- 331 (576)
Q Consensus 253 yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~- 331 (576)
++.+++ +.||++|+|.|++. ++|++|+++|+|..++ |++|.+++..+.+++ .++|.+.....+..
T Consensus 72 ~~~~~~-----n~G~~~a~n~g~~~----a~g~~i~~lD~D~~~~-~~~l~~l~~~~~~~~----~~~v~g~r~~~~~~~ 137 (243)
T PLN02726 72 LRPRPG-----KLGLGTAYIHGLKH----ASGDFVVIMDADLSHH-PKYLPSFIKKQRETG----ADIVTGTRYVKGGGV 137 (243)
T ss_pred EEecCC-----CCCHHHHHHHHHHH----cCCCEEEEEcCCCCCC-HHHHHHHHHHHHhcC----CcEEEEccccCCCCc
Confidence 565543 36899999999999 8999999999999997 999999999887654 34444432211111
Q ss_pred ccChHHHHH-HHHHHHHHHHHhhcCCccccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCCCCCch
Q 008144 332 KYDIYDGRF-RSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSN 410 (576)
Q Consensus 332 ~~d~~~~~~-~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (576)
.+-.+.... ...+........+.+..-.+|...++||+++..++.
T Consensus 138 ~~~~~~r~~~~~~~~~~~~~~~~~~~~d~~g~~~~~rr~~~~~i~~---------------------------------- 183 (243)
T PLN02726 138 HGWDLRRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKRSALEDLVS---------------------------------- 183 (243)
T ss_pred CCccHHHHHHHHHHHHHHHHHhCCCCCcCCCcccceeHHHHHHHHh----------------------------------
Confidence 011111111 112222222222222333455566899999986521
Q ss_pred hHHHhhcccccccccccCcccccccccCCCccccHHHHHHHHhcCCeEEEeC
Q 008144 411 VLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLT 462 (576)
Q Consensus 411 ~~~~~a~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~ 462 (576)
....+...+|+++.+++...||++.++|
T Consensus 184 ------------------------~~~~~~~~~~~el~~~~~~~g~~i~~vp 211 (243)
T PLN02726 184 ------------------------SVVSKGYVFQMEIIVRASRKGYRIEEVP 211 (243)
T ss_pred ------------------------hccCCCcEEehHHHHHHHHcCCcEEEeC
Confidence 0111123468999999999999999987
No 44
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.75 E-value=8.1e-17 Score=156.93 Aligned_cols=178 Identities=17% Similarity=0.097 Sum_probs=123.4
Q ss_pred eEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCccccc
Q 008144 97 IDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYF 176 (576)
Q Consensus 97 VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf 176 (576)
|+|+||+|| |+ +.+.++|.|++++.|+. .+|+|+|||++|.|.+.+.+
T Consensus 1 vsvii~~~n---~~-~~l~~~l~sl~~q~~~~--~evivvdd~s~d~~~~~~~~-------------------------- 48 (221)
T cd02522 1 LSIIIPTLN---EA-ENLPRLLASLRRLNPLP--LEIIVVDGGSTDGTVAIARS-------------------------- 48 (221)
T ss_pred CEEEEEccC---cH-HHHHHHHHHHHhccCCC--cEEEEEeCCCCccHHHHHhc--------------------------
Confidence 689999999 65 47999999999999965 89999999999976431110
Q ss_pred ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEEEec
Q 008144 177 SEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSR 256 (576)
Q Consensus 177 ~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv~R 256 (576)
+++.++..
T Consensus 49 ------------------------------------------------------------------------~~~~~~~~ 56 (221)
T cd02522 49 ------------------------------------------------------------------------AGVVVISS 56 (221)
T ss_pred ------------------------------------------------------------------------CCeEEEeC
Confidence 12444432
Q ss_pred cCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCcceEEEcccceeccCCccChH
Q 008144 257 EKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIY 336 (576)
Q Consensus 257 ekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~ 336 (576)
..+|++|+|.|+.. +++++|+++|+|.++. |+++.+++..+.++.. ..+.....+.+. +..
T Consensus 57 -------~~g~~~a~n~g~~~----a~~~~i~~~D~D~~~~-~~~l~~l~~~~~~~~~----~~~~~~~~~~~~---~~~ 117 (221)
T cd02522 57 -------PKGRARQMNAGAAA----ARGDWLLFLHADTRLP-PDWDAAIIETLRADGA----VAGAFRLRFDDP---GPR 117 (221)
T ss_pred -------CcCHHHHHHHHHHh----ccCCEEEEEcCCCCCC-hhHHHHHHHHhhcCCc----EEEEEEeeecCC---ccc
Confidence 24799999999999 8899999999999997 9999998776665442 222222222221 111
Q ss_pred HHHHHHHHHHHHHHHhhcCCccccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCCCCCchhHHHhh
Q 008144 337 DGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEET 416 (576)
Q Consensus 337 ~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 416 (576)
... +...........+..+.+.|.++||+++..+
T Consensus 118 ~~~----~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~------------------------------------------ 151 (221)
T cd02522 118 LRL----LELGANLRSRLFGLPYGDQGLFIRRELFEEL------------------------------------------ 151 (221)
T ss_pred hhh----hhhcccceecccCCCcCCceEEEEHHHHHHh------------------------------------------
Confidence 110 1111111111222334556788899988765
Q ss_pred cccccccccccCcccccccccCCCccccHHHHHHHHhcCCeEEE
Q 008144 417 GVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTY 460 (576)
Q Consensus 417 ~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y 460 (576)
|||++....||+++++++...|+++.+
T Consensus 152 -----------------G~fd~~~~~ED~d~~~r~~~~G~~~~~ 178 (221)
T cd02522 152 -----------------GGFPELPLMEDVELVRRLRRRGRPALL 178 (221)
T ss_pred -----------------CCCCccccccHHHHHHHHHhCCCEEEc
Confidence 578887789999999999999999876
No 45
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=99.74 E-value=8e-16 Score=169.39 Aligned_cols=169 Identities=18% Similarity=0.175 Sum_probs=105.8
Q ss_pred CCCEEEEeCCCCCCCchHHHHHHHHHhc-CCCCCcceEEEcccceeccCCccChHHHHHHHHH---HHHHHHHhhcCCcc
Q 008144 283 NSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAY---CVQWQGMDGLKGPV 358 (576)
Q Consensus 283 ~ge~Il~lDAD~~~~~pd~L~~~v~~f~-Dp~~g~~vg~VQ~pq~f~n~~~~d~~~~~~~~f~---~~~~~g~d~~~g~~ 358 (576)
..|||+.+|||+.+. |+++.+++.-+. ||+++..+|.+ +..|.. ...+..-+...| ...+++.++.-|.+
T Consensus 201 ~~~~il~~DaDt~~~-p~~~~~lv~~m~~d~~i~gvCG~t----~i~n~~-~s~~t~~Q~fEY~ish~l~Ka~Es~fG~V 274 (527)
T PF03142_consen 201 FYEYILMVDADTKFD-PDSVNRLVDAMERDPKIGGVCGET----RIDNKG-QSWWTMYQVFEYAISHHLQKAFESVFGSV 274 (527)
T ss_pred ceEEEEEecCCceEc-HHHHHHHHHHHcCCCCeEEEecee----EEcCCC-CCHhhheeccchhHHHHHHHHHHHHhCce
Confidence 459999999999997 999999998775 99865544433 334431 122211111122 23456667666665
Q ss_pred cc--ccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCCCCCchhHHHhhcccccccccccCcccccccc
Q 008144 359 LS--GTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGI 436 (576)
Q Consensus 359 ~~--Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~~G~ 436 (576)
.| |..+++|-+|+..-... +..- + ...+++++ |..... +.=.
T Consensus 275 tCLPGcfsmyR~~a~~~~~~~--~~p~------l-----------------~~~~i~~~--------Y~~~~~---dtlh 318 (527)
T PF03142_consen 275 TCLPGCFSMYRISALMDGDGY--WVPL------L-----------------ISPDIIEK--------YSENPV---DTLH 318 (527)
T ss_pred eecCCcceeeeeehhcccccc--cccc------c-----------------cchHHHHH--------Hhhccc---hHHH
Confidence 44 65567999998752100 0000 0 00001110 000000 0000
Q ss_pred --cCCCccccHHHHHHHHhc--CCeEEEeCCCCCeeEeecCCCHHHHHHHHHHhhhhhHHHHh
Q 008144 437 --LYQSVSEDLFTGFILHCK--GWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGL 495 (576)
Q Consensus 437 --~~~sitED~~t~~rl~~~--Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G~~qv~~ 495 (576)
.-..+.||-.++..|.++ |||..|++ ++.+++.+|++++.+++||+||..|.+-.++
T Consensus 319 ~~nl~~lGEDR~LttLlLk~~~~~k~~y~~--~A~a~T~aP~t~~vflsQRRRWinSTi~Nl~ 379 (527)
T PF03142_consen 319 QKNLLDLGEDRWLTTLLLKQFPGYKTEYVP--SAVAYTDAPETFSVFLSQRRRWINSTIHNLF 379 (527)
T ss_pred HHhhhhcchhHHHHHHHHhhCCCceEEEcc--cccccccCCccHHHHHHHhhhccchhHhhHh
Confidence 112468999999878877 89999998 6899999999999999999999999987655
No 46
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.72 E-value=1.1e-16 Score=154.50 Aligned_cols=193 Identities=17% Similarity=0.128 Sum_probs=130.2
Q ss_pred EEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCcccccc
Q 008144 98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177 (576)
Q Consensus 98 dV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 177 (576)
+|+||||| |+ ..+.++|.|+++++||. ++|+|+|||++|.|.+.+.+.++
T Consensus 1 sIvIp~yn---~~-~~l~~~l~sl~~q~~~~--~eiiVvddgS~d~t~~~~~~~~~------------------------ 50 (214)
T cd04196 1 AVLMATYN---GE-KYLREQLDSILAQTYKN--DELIISDDGSTDGTVEIIKEYID------------------------ 50 (214)
T ss_pred CEEEEecC---cH-HHHHHHHHHHHhCcCCC--eEEEEEeCCCCCCcHHHHHHHHh------------------------
Confidence 58999999 65 58999999999999994 99999999999988654332110
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEEEecc
Q 008144 178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSRE 257 (576)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv~Re 257 (576)
.|| +.+.++..+
T Consensus 51 --------------------------------------------~~~------------------------~~~~~~~~~ 62 (214)
T cd04196 51 --------------------------------------------KDP------------------------FIIILIRNG 62 (214)
T ss_pred --------------------------------------------cCC------------------------ceEEEEeCC
Confidence 011 124444443
Q ss_pred CCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHh-cCCCCCcceEEEcccceeccCCccChH
Q 008144 258 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKISSSLAFVQFPQKFHNINKYDIY 336 (576)
Q Consensus 258 krpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f-~Dp~~g~~vg~VQ~pq~f~n~~~~d~~ 336 (576)
+ ++|+++|+|.|+.. +++|||+++|+|.++. |+.|.+++..+ .++. .+++.+.....+.+. ...
T Consensus 63 ~-----~~G~~~~~n~g~~~----~~g~~v~~ld~Dd~~~-~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~ 127 (214)
T cd04196 63 K-----NLGVARNFESLLQA----ADGDYVFFCDQDDIWL-PDKLERLLKAFLKDDK----PLLVYSDLELVDENG-NPI 127 (214)
T ss_pred C-----CccHHHHHHHHHHh----CCCCEEEEECCCcccC-hhHHHHHHHHHhcCCC----ceEEecCcEEECCCC-CCc
Confidence 3 47899999999999 8999999999999997 99999999984 4665 456666554433221 111
Q ss_pred HHHHHHHHHH--HHHHHhhcCCccccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCCCCCchhHHH
Q 008144 337 DGRFRSAYCV--QWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQE 414 (576)
Q Consensus 337 ~~~~~~f~~~--~~~g~d~~~g~~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (576)
.......... .............+|+++++||+++..+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---------------------------------------- 167 (214)
T cd04196 128 GESFFEYQKIKPGTSFNNLLFQNVVTGCTMAFNRELLELA---------------------------------------- 167 (214)
T ss_pred ccccccccccCCccCHHHHHHhCccCCceeeEEHHHHHhh----------------------------------------
Confidence 0000000000 0001111123346788899999999765
Q ss_pred hhcccccccccccCcccccccccCC-CccccHHHHHHHHhcCCeEEEeCC
Q 008144 415 ETGVLASCSYEHQTKWGEEVGILYQ-SVSEDLFTGFILHCKGWTSTYLTP 463 (576)
Q Consensus 415 ~a~~v~~c~ye~~t~wg~~~G~~~~-sitED~~t~~rl~~~Gwrs~y~~~ 463 (576)
+++... ...||..+..++.. |+++.|+++
T Consensus 168 -------------------~~~~~~~~~~~D~~~~~~~~~-~~~~~~~~~ 197 (214)
T cd04196 168 -------------------LPFPDADVIMHDWWLALLASA-FGKVVFLDE 197 (214)
T ss_pred -------------------ccccccccccchHHHHHHHHH-cCceEEcch
Confidence 345544 56799999988877 668888874
No 47
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=99.72 E-value=5.9e-16 Score=151.87 Aligned_cols=110 Identities=14% Similarity=0.080 Sum_probs=82.6
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCccccccc
Q 008144 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (576)
Q Consensus 99 V~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (576)
|+||+|| ++ +.+.+||.|+++++||. .++|+|+||||+|.|.+.+.+-. .+
T Consensus 1 ViIp~yn---~~-~~l~~~l~sl~~q~~~~-~~eiiVvDd~S~d~t~~i~~~~~----------~~-------------- 51 (219)
T cd06913 1 IILPVHN---GE-QWLDECLESVLQQDFEG-TLELSVFNDASTDKSAEIIEKWR----------KK-------------- 51 (219)
T ss_pred CEEeecC---cH-HHHHHHHHHHHhCCCCC-CEEEEEEeCCCCccHHHHHHHHH----------Hh--------------
Confidence 6899999 54 59999999999999984 59999999999998864332210 00
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEEEeccC
Q 008144 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (576)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv~Rek 258 (576)
+ ..+++.++..+.
T Consensus 52 ----------------------~---------------------------------------------~~~~~~~~~~~~ 64 (219)
T cd06913 52 ----------------------L---------------------------------------------EDSGVIVLVGSH 64 (219)
T ss_pred ----------------------C---------------------------------------------cccCeEEEEecc
Confidence 0 001345554433
Q ss_pred CCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc
Q 008144 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (576)
Q Consensus 259 rpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~ 310 (576)
+.+ .+.|.+.|+|.|++. ++||+++++|+|.++. |+.+.+.+..+.
T Consensus 65 ~~~-~~~G~~~a~N~g~~~----a~gd~i~~lD~D~~~~-~~~l~~~~~~~~ 110 (219)
T cd06913 65 NSP-SPKGVGYAKNQAIAQ----SSGRYLCFLDSDDVMM-PQRIRLQYEAAL 110 (219)
T ss_pred cCC-CCccHHHHHHHHHHh----cCCCEEEEECCCccCC-hhHHHHHHHHHH
Confidence 211 246899999999999 8999999999999997 999988777665
No 48
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=99.72 E-value=5e-16 Score=151.67 Aligned_cols=107 Identities=17% Similarity=0.116 Sum_probs=83.9
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCccccccc
Q 008144 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (576)
Q Consensus 99 V~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (576)
|+||+|| |+ ..+.++|.++.++.|+ ..++|+|+||||+|.|.+.+.+
T Consensus 1 ViIp~yn---~~-~~l~~~l~sl~~q~~~-~~~eiiiVDd~S~d~t~~~~~~---------------------------- 47 (224)
T cd06442 1 IIIPTYN---ER-ENIPELIERLDAALKG-IDYEIIVVDDNSPDGTAEIVRE---------------------------- 47 (224)
T ss_pred CeEeccc---hh-hhHHHHHHHHHHhhcC-CCeEEEEEeCCCCCChHHHHHH----------------------------
Confidence 6899999 65 5799999999999982 2499999999999987542221
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEEEeccC
Q 008144 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (576)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv~Rek 258 (576)
|.+ ..|++.++..++
T Consensus 48 ----------------------~~~-------------------------------------------~~~~i~~~~~~~ 62 (224)
T cd06442 48 ----------------------LAK-------------------------------------------EYPRVRLIVRPG 62 (224)
T ss_pred ----------------------HHH-------------------------------------------hCCceEEEecCC
Confidence 100 012345555554
Q ss_pred CCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCC
Q 008144 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPK 313 (576)
Q Consensus 259 rpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~ 313 (576)
+.||++|+|.|++. +.+|+|+++|+|..+. |++|.+++..+.+++
T Consensus 63 -----n~G~~~a~n~g~~~----a~gd~i~~lD~D~~~~-~~~l~~l~~~~~~~~ 107 (224)
T cd06442 63 -----KRGLGSAYIEGFKA----ARGDVIVVMDADLSHP-PEYIPELLEAQLEGG 107 (224)
T ss_pred -----CCChHHHHHHHHHH----cCCCEEEEEECCCCCC-HHHHHHHHHHHhcCC
Confidence 47899999999999 8999999999999997 999999999876655
No 49
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=99.71 E-value=3.7e-16 Score=147.71 Aligned_cols=171 Identities=18% Similarity=0.096 Sum_probs=120.7
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCccccccc
Q 008144 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (576)
Q Consensus 99 V~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (576)
|+||+|| |+ +.+.+||.|+++++|+. .+|+|+|||++|.|.+.+.+..
T Consensus 1 ivip~~n---~~-~~l~~~l~sl~~q~~~~--~eiivvdd~s~d~t~~~~~~~~-------------------------- 48 (182)
T cd06420 1 LIITTYN---RP-EALELVLKSVLNQSILP--FEVIIADDGSTEETKELIEEFK-------------------------- 48 (182)
T ss_pred CEEeecC---Ch-HHHHHHHHHHHhccCCC--CEEEEEeCCCchhHHHHHHHHH--------------------------
Confidence 6899999 66 58999999999999986 8999999999997753222110
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEEEeccC
Q 008144 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (576)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv~Rek 258 (576)
.. . .. .+.++.+++
T Consensus 49 ------------------------~~---------~--------------------------------~~-~~~~~~~~~ 62 (182)
T cd06420 49 ------------------------SQ---------F--------------------------------PI-PIKHVWQED 62 (182)
T ss_pred ------------------------hh---------c--------------------------------CC-ceEEEEcCC
Confidence 00 0 00 134444432
Q ss_pred CCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCcceEEEcccceeccCCccChHHH
Q 008144 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDG 338 (576)
Q Consensus 259 rpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~~~ 338 (576)
+..+|++|+|.|++. +++|+|+++|+|.++. |++|.+++..+ ++. ++ |.+++...+.....
T Consensus 63 ----~~~~~~~~~n~g~~~----a~g~~i~~lD~D~~~~-~~~l~~~~~~~-~~~----~~-v~g~~~~~~~~~~~---- 123 (182)
T cd06420 63 ----EGFRKAKIRNKAIAA----AKGDYLIFIDGDCIPH-PDFIADHIELA-EPG----VF-LSGSRVLLNEKLTE---- 123 (182)
T ss_pred ----cchhHHHHHHHHHHH----hcCCEEEEEcCCcccC-HHHHHHHHHHh-CCC----cE-Eecceeecccccce----
Confidence 234799999999999 8999999999999997 99999999877 554 33 33444333211100
Q ss_pred HHHHHHHHHHHHHhhcCCccccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCCCCCchhHHHhhcc
Q 008144 339 RFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGV 418 (576)
Q Consensus 339 ~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 418 (576)
..+.|+++.++|+.+..+
T Consensus 124 ------------------~~~~~~~~~~~r~~~~~~-------------------------------------------- 141 (182)
T cd06420 124 ------------------RGIRGCNMSFWKKDLLAV-------------------------------------------- 141 (182)
T ss_pred ------------------eEeccceEEEEHHHHHHh--------------------------------------------
Confidence 235677778888887654
Q ss_pred cccccccccCcccccccccCCC---ccccHHHHHHHHhcCCeEEEeCC
Q 008144 419 LASCSYEHQTKWGEEVGILYQS---VSEDLFTGFILHCKGWTSTYLTP 463 (576)
Q Consensus 419 v~~c~ye~~t~wg~~~G~~~~s---itED~~t~~rl~~~Gwrs~y~~~ 463 (576)
+||.... -.||+++++|+.++|++..++.+
T Consensus 142 ---------------ggf~~~~~~~~~eD~~l~~r~~~~g~~~~~~~~ 174 (182)
T cd06420 142 ---------------NGFDEEFTGWGGEDSELVARLLNSGIKFRKLKF 174 (182)
T ss_pred ---------------CCCCcccccCCcchHHHHHHHHHcCCcEEEecc
Confidence 4665442 26999999999999977776653
No 50
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.71 E-value=2.4e-16 Score=145.33 Aligned_cols=156 Identities=19% Similarity=0.201 Sum_probs=122.5
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCccccccc
Q 008144 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (576)
Q Consensus 99 V~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (576)
|+||+|| |+ +.+.+|+.|+.+++||. .+|+|+|||+++.|.+.+.+.
T Consensus 1 vii~~~~---~~-~~l~~~l~sl~~~~~~~--~~iiivdd~s~~~~~~~~~~~--------------------------- 47 (166)
T cd04186 1 IIIVNYN---SL-EYLKACLDSLLAQTYPD--FEVIVVDNASTDGSVELLREL--------------------------- 47 (166)
T ss_pred CEEEecC---CH-HHHHHHHHHHHhccCCC--eEEEEEECCCCchHHHHHHHh---------------------------
Confidence 6899999 74 78999999999999965 899999999998765432210
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEEEeccC
Q 008144 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (576)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv~Rek 258 (576)
.+++.++..++
T Consensus 48 ---------------------------------------------------------------------~~~~~~~~~~~ 58 (166)
T cd04186 48 ---------------------------------------------------------------------FPEVRLIRNGE 58 (166)
T ss_pred ---------------------------------------------------------------------CCCeEEEecCC
Confidence 01245555433
Q ss_pred CCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc-CCCCCcceEEEcccceeccCCccChHH
Q 008144 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNINKYDIYD 337 (576)
Q Consensus 259 rpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~-Dp~~g~~vg~VQ~pq~f~n~~~~d~~~ 337 (576)
+.|+++|+|.+++. +++++++++|+|.++. |+++.+++..+. +++ ++++...
T Consensus 59 -----~~g~~~a~n~~~~~----~~~~~i~~~D~D~~~~-~~~l~~~~~~~~~~~~----~~~~~~~------------- 111 (166)
T cd04186 59 -----NLGFGAGNNQGIRE----AKGDYVLLLNPDTVVE-PGALLELLDAAEQDPD----VGIVGPK------------- 111 (166)
T ss_pred -----CcChHHHhhHHHhh----CCCCEEEEECCCcEEC-ccHHHHHHHHHHhCCC----ceEEEcc-------------
Confidence 46899999999999 7999999999999997 999999988665 555 5555432
Q ss_pred HHHHHHHHHHHHHHhhcCCccccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCCCCCchhHHHhhc
Q 008144 338 GRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETG 417 (576)
Q Consensus 338 ~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 417 (576)
++|++.++||+++..+
T Consensus 112 ---------------------~~~~~~~~~~~~~~~~------------------------------------------- 127 (166)
T cd04186 112 ---------------------VSGAFLLVRREVFEEV------------------------------------------- 127 (166)
T ss_pred ---------------------CceeeEeeeHHHHHHc-------------------------------------------
Confidence 7788889999998765
Q ss_pred ccccccccccCcccccccccCCC--ccccHHHHHHHHhcCCeEEEeCC
Q 008144 418 VLASCSYEHQTKWGEEVGILYQS--VSEDLFTGFILHCKGWTSTYLTP 463 (576)
Q Consensus 418 ~v~~c~ye~~t~wg~~~G~~~~s--itED~~t~~rl~~~Gwrs~y~~~ 463 (576)
+||+... ..||.++++++.++||++.+++.
T Consensus 128 ----------------~~~~~~~~~~~eD~~~~~~~~~~g~~i~~~~~ 159 (166)
T cd04186 128 ----------------GGFDEDFFLYYEDVDLCLRARLAGYRVLYVPQ 159 (166)
T ss_pred ----------------CCCChhhhccccHHHHHHHHHHcCCeEEEccc
Confidence 3455432 45999999999999999999873
No 51
>PRK10073 putative glycosyl transferase; Provisional
Probab=99.68 E-value=1.1e-15 Score=160.93 Aligned_cols=110 Identities=17% Similarity=0.192 Sum_probs=89.5
Q ss_pred CCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCcc
Q 008144 94 LPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQ 173 (576)
Q Consensus 94 ~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~ 173 (576)
.|.|+|+||+|| ++ ..+.+||.|+++++|+. ++|+|+||||+|.|.+.+.+.+
T Consensus 5 ~p~vSVIIP~yN---~~-~~L~~~l~Sl~~Qt~~~--~EIIiVdDgStD~t~~i~~~~~--------------------- 57 (328)
T PRK10073 5 TPKLSIIIPLYN---AG-KDFRAFMESLIAQTWTA--LEIIIVNDGSTDNSVEIAKHYA--------------------- 57 (328)
T ss_pred CCeEEEEEeccC---CH-HHHHHHHHHHHhCCCCC--eEEEEEeCCCCccHHHHHHHHH---------------------
Confidence 589999999999 54 58999999999999986 9999999999998864332210
Q ss_pred cccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEE
Q 008144 174 AYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVY 253 (576)
Q Consensus 174 ~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~y 253 (576)
+ ..|++.+
T Consensus 58 -----------------------------~-------------------------------------------~~~~i~v 65 (328)
T PRK10073 58 -----------------------------E-------------------------------------------NYPHVRL 65 (328)
T ss_pred -----------------------------h-------------------------------------------hCCCEEE
Confidence 0 1235677
Q ss_pred EeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCC
Q 008144 254 VSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPK 313 (576)
Q Consensus 254 v~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~ 313 (576)
+..+ ++|.++|.|.|+.. ++|+||+++|+|..+. |+.+.+++..+.++.
T Consensus 66 i~~~------n~G~~~arN~gl~~----a~g~yi~flD~DD~~~-p~~l~~l~~~~~~~~ 114 (328)
T PRK10073 66 LHQA------NAGVSVARNTGLAV----ATGKYVAFPDADDVVY-PTMYETLMTMALEDD 114 (328)
T ss_pred EECC------CCChHHHHHHHHHh----CCCCEEEEECCCCccC-hhHHHHHHHHHHhCC
Confidence 7532 37899999999999 9999999999999997 999999998776443
No 52
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.66 E-value=2.8e-15 Score=144.68 Aligned_cols=175 Identities=15% Similarity=0.054 Sum_probs=126.0
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCccccccc
Q 008144 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (576)
Q Consensus 99 V~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (576)
|+||||| |+ +.+.++|.|++++.||. .+|+|+|||++|.|.+.+.+..
T Consensus 1 viI~~~n---~~-~~l~~~l~sl~~q~~~~--~eiiivD~~s~d~t~~~~~~~~-------------------------- 48 (202)
T cd04185 1 AVVVTYN---RL-DLLKECLDALLAQTRPP--DHIIVIDNASTDGTAEWLTSLG-------------------------- 48 (202)
T ss_pred CEEEeeC---CH-HHHHHHHHHHHhccCCC--ceEEEEECCCCcchHHHHHHhc--------------------------
Confidence 6899999 55 68999999999999996 6999999999998754222100
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEEEeccC
Q 008144 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (576)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv~Rek 258 (576)
... .+.++..++
T Consensus 49 -------------------------------------------------------------------~~~-~i~~~~~~~ 60 (202)
T cd04185 49 -------------------------------------------------------------------DLD-NIVYLRLPE 60 (202)
T ss_pred -------------------------------------------------------------------CCC-ceEEEECcc
Confidence 001 145565543
Q ss_pred CCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCcceEEEcccceeccCCccChHHH
Q 008144 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDG 338 (576)
Q Consensus 259 rpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~~~ 338 (576)
+.|++.++|.+++.+- -+++|+++++|+|.+++ |+++++++..+.+++ ++++. |..+.. +.
T Consensus 61 -----n~g~~~~~n~~~~~a~-~~~~d~v~~ld~D~~~~-~~~l~~l~~~~~~~~----~~~~~-~~~~~~----~~--- 121 (202)
T cd04185 61 -----NLGGAGGFYEGVRRAY-ELGYDWIWLMDDDAIPD-PDALEKLLAYADKDN----PQFLA-PLVLDP----DG--- 121 (202)
T ss_pred -----ccchhhHHHHHHHHHh-ccCCCEEEEeCCCCCcC-hHHHHHHHHHHhcCC----ceEec-ceeEcC----CC---
Confidence 3678999999998742 25789999999999998 999999999888776 44443 333321 10
Q ss_pred HHHHHHHHHHHHHhhcCCccccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCCCCCchhHHHhhcc
Q 008144 339 RFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGV 418 (576)
Q Consensus 339 ~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 418 (576)
+++|.++||+++..++
T Consensus 122 ---------------------~~~~~~~~~~~~~~~g------------------------------------------- 137 (202)
T cd04185 122 ---------------------SFVGVLISRRVVEKIG------------------------------------------- 137 (202)
T ss_pred ---------------------ceEEEEEeHHHHHHhC-------------------------------------------
Confidence 4567899999997652
Q ss_pred cccccccccCcccccccccCC--CccccHHHHHHHHhcCCeEEEeCCCCCeeEeecCCC
Q 008144 419 LASCSYEHQTKWGEEVGILYQ--SVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTN 475 (576)
Q Consensus 419 v~~c~ye~~t~wg~~~G~~~~--sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~t 475 (576)
|+... ...||.+.++++..+|+++ |++. +..+-..+.+
T Consensus 138 ----------------~~~~~~~~~~eD~~~~~r~~~~G~~i-~~~~--~~~~h~~~~~ 177 (202)
T cd04185 138 ----------------LPDKEFFIWGDDTEYTLRASKAGPGI-YVPD--AVVVHKTAIN 177 (202)
T ss_pred ----------------CCChhhhccchHHHHHHHHHHcCCcE-Eecc--eEEEEccccc
Confidence 22211 3359999999999999999 9874 5555554443
No 53
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=99.65 E-value=5.9e-15 Score=143.97 Aligned_cols=108 Identities=19% Similarity=0.128 Sum_probs=82.3
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHcCCC--CCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCccccc
Q 008144 99 VFICTADPEKEPAIGVMNTVLSAMALDY--PVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYF 176 (576)
Q Consensus 99 V~Iptyn~~~E~~~~v~~Tv~s~~~ldY--P~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf 176 (576)
|+||+|| |+ ..+.++|.+++++.+ +....+|+|+||||+|.|.+.+.+..
T Consensus 1 iiip~yN---~~-~~l~~~l~~l~~~~~~~~~~~~eiivvdd~S~D~t~~~~~~~~------------------------ 52 (211)
T cd04188 1 VVIPAYN---EE-KRLPPTLEEAVEYLEERPSFSYEIIVVDDGSKDGTAEVARKLA------------------------ 52 (211)
T ss_pred CEEcccC---hH-HHHHHHHHHHHHHHhccCCCCEEEEEEeCCCCCchHHHHHHHH------------------------
Confidence 6899999 55 588999999998865 33459999999999998864332210
Q ss_pred ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCc-EEEEe
Q 008144 177 SEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPL-LVYVS 255 (576)
Q Consensus 177 ~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~-l~yv~ 255 (576)
+ ..|. +.++.
T Consensus 53 --------------------------~-------------------------------------------~~~~~i~~i~ 63 (211)
T cd04188 53 --------------------------R-------------------------------------------KNPALIRVLT 63 (211)
T ss_pred --------------------------H-------------------------------------------hCCCcEEEEE
Confidence 0 0111 35555
Q ss_pred ccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCC
Q 008144 256 REKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPK 313 (576)
Q Consensus 256 Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~ 313 (576)
.++ +.||++|+|.|++. +.+++|+++|+|..++ |+++.+++..+.++.
T Consensus 64 ~~~-----n~G~~~a~~~g~~~----a~gd~i~~ld~D~~~~-~~~l~~l~~~~~~~~ 111 (211)
T cd04188 64 LPK-----NRGKGGAVRAGMLA----ARGDYILFADADLATP-FEELEKLEEALKTSG 111 (211)
T ss_pred ccc-----CCCcHHHHHHHHHH----hcCCEEEEEeCCCCCC-HHHHHHHHHHHhccC
Confidence 443 35899999999999 8999999999999997 999999999866544
No 54
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=99.64 E-value=2.9e-15 Score=144.23 Aligned_cols=153 Identities=18% Similarity=0.226 Sum_probs=117.4
Q ss_pred CCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCcceEEEcccceeccCCccChHHHHHH-H
Q 008144 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFR-S 342 (576)
Q Consensus 264 ~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~~~~~~-~ 342 (576)
...|.+||..+++. . +++|++++.|+|..++ |++|++++..+.||+ +|+|.++....+. +.+..... .
T Consensus 15 ~N~Kv~nL~~~~~~-~--a~~d~~~~~DsDi~v~-p~~L~~lv~~l~~p~----vglVt~~~~~~~~---~~~~~~l~~~ 83 (175)
T PF13506_consen 15 CNPKVNNLAQGLEA-G--AKYDYLVISDSDIRVP-PDYLRELVAPLADPG----VGLVTGLPRGVPA---RGFWSRLEAA 83 (175)
T ss_pred CChHHHHHHHHHHh-h--CCCCEEEEECCCeeEC-HHHHHHHHHHHhCCC----CcEEEecccccCC---cCHHHHHHHH
Confidence 46899999999997 3 7999999999999998 999999999999998 6788776655443 23333332 2
Q ss_pred HHHHHHHHHhhc-CCccccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCCCCCchhHHHhhccccc
Q 008144 343 AYCVQWQGMDGL-KGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLAS 421 (576)
Q Consensus 343 f~~~~~~g~d~~-~g~~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~ 421 (576)
++.....-.... +..++.|..+++||++|+++
T Consensus 84 ~~~~~~~~~~a~~~~~~~~G~~m~~rr~~L~~~----------------------------------------------- 116 (175)
T PF13506_consen 84 FFNFLPGVLQALGGAPFAWGGSMAFRREALEEI----------------------------------------------- 116 (175)
T ss_pred HHhHHHHHHHHhcCCCceecceeeeEHHHHHHc-----------------------------------------------
Confidence 322221111112 34577899999999999875
Q ss_pred ccccccCcccccccccC--CCccccHHHHHHHHhcCCeEEEeCCCCCeeEeecC----CCHHHHHHHHHHhhh
Q 008144 422 CSYEHQTKWGEEVGILY--QSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTST----TNLNDLLIQGTRWGS 488 (576)
Q Consensus 422 c~ye~~t~wg~~~G~~~--~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP----~tl~~~l~Qr~RWa~ 488 (576)
|||.. +.++||+.++-+++.+||+++..+ .++.....| .+++++++++.||++
T Consensus 117 ------------GG~~~l~~~ladD~~l~~~~~~~G~~v~~~~--~~v~~~~~~~~~~~s~~~~~~r~~RW~r 175 (175)
T PF13506_consen 117 ------------GGFEALADYLADDYALGRRLRARGYRVVLSP--YPVVQTSVPRTLEDSFRDFFRRQLRWAR 175 (175)
T ss_pred ------------ccHHHHhhhhhHHHHHHHHHHHCCCeEEEcc--hheeecccCccccccHHHHHHHHHhhcC
Confidence 45443 588999999999999999999987 466777777 489999999999985
No 55
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=99.63 E-value=1.4e-15 Score=149.96 Aligned_cols=152 Identities=16% Similarity=0.103 Sum_probs=91.7
Q ss_pred cEEEEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHH---HHh-cCCCCCcceEEEcccc
Q 008144 250 LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAM---CFH-LDPKISSSLAFVQFPQ 325 (576)
Q Consensus 250 ~l~yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v---~~f-~Dp~~g~~vg~VQ~pq 325 (576)
++.++..++ +.|+++|+|.|++.+.. .++|+++++|+|..++ |++|.+++ ..+ .++. ++.+ +|+
T Consensus 48 ~i~~i~~~~-----n~G~~~a~N~g~~~a~~-~~~d~v~~lD~D~~~~-~~~l~~l~~~~~~~~~~~~----~~~~-~~~ 115 (237)
T cd02526 48 KIELIHLGE-----NLGIAKALNIGIKAALE-NGADYVLLFDQDSVPP-PDMVEKLLAYKILSDKNSN----IGAV-GPR 115 (237)
T ss_pred cEEEEECCC-----ceehHHhhhHHHHHHHh-CCCCEEEEECCCCCcC-HhHHHHHHHHHHhhccCCC----eEEE-eee
Confidence 366776654 36799999999998210 1349999999999997 99999985 323 2554 4443 454
Q ss_pred eeccCCccChHHHHHHH-HHHHHHHHHhhc-CCccccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccC
Q 008144 326 KFHNINKYDIYDGRFRS-AYCVQWQGMDGL-KGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNA 403 (576)
Q Consensus 326 ~f~n~~~~d~~~~~~~~-f~~~~~~g~d~~-~g~~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~ 403 (576)
................. .+.......... ......|+|+++||+++..+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~----------------------------- 166 (237)
T cd02526 116 IIDRRTGENSPGVRKSGYKLRIQKEGEEGLKEVDFLITSGSLISLEALEKV----------------------------- 166 (237)
T ss_pred EEcCCCCeeccceeccCccceecccccCCceEeeeeeccceEEcHHHHHHh-----------------------------
Confidence 43321111100000000 000000001111 12235688899999999865
Q ss_pred CCCCCchhHHHhhcccccccccccCcccccccccCCCc--cccHHHHHHHHhcCCeEEEeCCCCCeeEeecCC
Q 008144 404 NGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSV--SEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTT 474 (576)
Q Consensus 404 ~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~~G~~~~si--tED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~ 474 (576)
+||+.... .||+++++|+..+||++.|++ .+...-..+.
T Consensus 167 ------------------------------ggfd~~~~~~~eD~d~~~r~~~~G~~~~~~~--~~~v~h~~~~ 207 (237)
T cd02526 167 ------------------------------GGFDEDLFIDYVDTEWCLRARSKGYKIYVVP--DAVLKHELGD 207 (237)
T ss_pred ------------------------------CCCCHHHcCccchHHHHHHHHHcCCcEEEEc--CeEEEecccC
Confidence 45654432 489999999999999999998 3555544333
No 56
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=99.62 E-value=1.3e-15 Score=139.37 Aligned_cols=163 Identities=28% Similarity=0.334 Sum_probs=105.3
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCccccccc
Q 008144 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (576)
Q Consensus 99 V~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (576)
|+||+|| |+ +.+.+||.|++++.|+. .+|+|+|||+++.|.+.+.+..
T Consensus 1 Viip~~n---~~-~~l~~~l~sl~~q~~~~--~~iivvdd~s~d~t~~~~~~~~-------------------------- 48 (180)
T cd06423 1 IIVPAYN---EE-AVIERTIESLLALDYPK--LEVIVVDDGSTDDTLEILEELA-------------------------- 48 (180)
T ss_pred CeecccC---hH-HHHHHHHHHHHhCCCCc--eEEEEEeCCCccchHHHHHHHh--------------------------
Confidence 6899999 66 69999999999999975 8999999999998754322210
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEEEeccC
Q 008144 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (576)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv~Rek 258 (576)
.. ..+.+.++..++
T Consensus 49 -----------------------~~-------------------------------------------~~~~~~~~~~~~ 62 (180)
T cd06423 49 -----------------------AL-------------------------------------------YIRRVLVVRDKE 62 (180)
T ss_pred -----------------------cc-------------------------------------------ccceEEEEEecc
Confidence 00 001244454443
Q ss_pred CCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHH-hcCCCCCcceEEEcccceeccCCccChHH
Q 008144 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCF-HLDPKISSSLAFVQFPQKFHNINKYDIYD 337 (576)
Q Consensus 259 rpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~-f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~~ 337 (576)
+.||+.|+|.|++. +++++|+++|+|..+. |++|.+++.. +.+++ ++.|.......+... ..+.
T Consensus 63 -----~~g~~~~~n~~~~~----~~~~~i~~~D~D~~~~-~~~l~~~~~~~~~~~~----~~~v~~~~~~~~~~~-~~~~ 127 (180)
T cd06423 63 -----NGGKAGALNAGLRH----AKGDIVVVLDADTILE-PDALKRLVVPFFADPK----VGAVQGRVRVRNGSE-NLLT 127 (180)
T ss_pred -----cCCchHHHHHHHHh----cCCCEEEEECCCCCcC-hHHHHHHHHHhccCCC----eeeEeeeEEEecCcC-ccee
Confidence 47899999999999 8999999999999997 9999998544 44666 455544433332210 1111
Q ss_pred HHHHHHHH----HHHHHHhhcCC-ccccccceEEEccccccc
Q 008144 338 GRFRSAYC----VQWQGMDGLKG-PVLSGTGYYIKRESLYAD 374 (576)
Q Consensus 338 ~~~~~f~~----~~~~g~d~~~g-~~~~Gtg~~~RR~AL~~i 374 (576)
......+. ....+...... ..++|++.++||+++..+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 169 (180)
T cd06423 128 RLQAIEYLSIFRLGRRAQSALGGVLVLSGAFGAFRREALREV 169 (180)
T ss_pred ccchheecceeeeeeehhheecceeecCchHHHHHHHHHHHh
Confidence 11110010 00111111122 346788889999999765
No 57
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=99.60 E-value=4.8e-13 Score=141.37 Aligned_cols=116 Identities=18% Similarity=0.143 Sum_probs=85.5
Q ss_pred CCCCceEEEEecCCCCCCChHHHHHHHHHHHcC------CCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhh
Q 008144 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMAL------DYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRY 165 (576)
Q Consensus 92 ~~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~l------dYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~ 165 (576)
+..|.|+|+||+|| |+ ..+..++.++.++ ++|...++|+|+||||+|.|.+.+.+.++ ++
T Consensus 67 ~~~~~isVVIP~yN---e~-~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~~i~~~~~~----------~~ 132 (333)
T PTZ00260 67 DSDVDLSIVIPAYN---EE-DRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLKVAKDFWR----------QN 132 (333)
T ss_pred CCCeEEEEEEeeCC---CH-HHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchHHHHHHHHH----------hc
Confidence 35688999999999 55 4688888887653 24544699999999999998753332110 00
Q ss_pred CCccCCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccc
Q 008144 166 GIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADL 245 (576)
Q Consensus 166 ~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~ 245 (576)
.
T Consensus 133 ~------------------------------------------------------------------------------- 133 (333)
T PTZ00260 133 I------------------------------------------------------------------------------- 133 (333)
T ss_pred C-------------------------------------------------------------------------------
Confidence 0
Q ss_pred cCCCcEEEEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc
Q 008144 246 VEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (576)
Q Consensus 246 ~~~P~l~yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~ 310 (576)
..-+++.++..++ +.||++|+|.|++. ++|++|+++|+|...+ |+.+.+++..+.
T Consensus 134 ~~~~~i~vi~~~~-----N~G~~~A~~~Gi~~----a~gd~I~~~DaD~~~~-~~~l~~l~~~l~ 188 (333)
T PTZ00260 134 NPNIDIRLLSLLR-----NKGKGGAVRIGMLA----SRGKYILMVDADGATD-IDDFDKLEDIML 188 (333)
T ss_pred CCCCcEEEEEcCC-----CCChHHHHHHHHHH----ccCCEEEEEeCCCCCC-HHHHHHHHHHHH
Confidence 0001356665543 36899999999999 8999999999999997 999988887775
No 58
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=99.59 E-value=1.3e-15 Score=139.44 Aligned_cols=166 Identities=16% Similarity=0.054 Sum_probs=108.8
Q ss_pred EEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCcccccc
Q 008144 98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177 (576)
Q Consensus 98 dV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 177 (576)
+|+||+|| |+ +.+.+|+.|++.+.++. .+|+|+|||++|.|.+.+.+..+
T Consensus 1 Svvip~~n---~~-~~l~~~l~sl~~q~~~~--~eiivvdd~s~d~~~~~~~~~~~------------------------ 50 (169)
T PF00535_consen 1 SVVIPTYN---EA-EYLERTLESLLKQTDPD--FEIIVVDDGSTDETEEILEEYAE------------------------ 50 (169)
T ss_dssp EEEEEESS----T-TTHHHHHHHHHHHSGCE--EEEEEEECS-SSSHHHHHHHHHC------------------------
T ss_pred CEEEEeeC---CH-HHHHHHHHHHhhccCCC--EEEEEeccccccccccccccccc------------------------
Confidence 69999999 53 58999999999996665 99999999999987543332110
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEEEecc
Q 008144 178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSRE 257 (576)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv~Re 257 (576)
..+++.|+.++
T Consensus 51 ---------------------------------------------------------------------~~~~i~~i~~~ 61 (169)
T PF00535_consen 51 ---------------------------------------------------------------------SDPNIRYIRNP 61 (169)
T ss_dssp ---------------------------------------------------------------------CSTTEEEEEHC
T ss_pred ---------------------------------------------------------------------ccccccccccc
Confidence 11358899887
Q ss_pred CCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCcceEEEcccceeccCCccChHH
Q 008144 258 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYD 337 (576)
Q Consensus 258 krpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~~ 337 (576)
++ .|+++|+|.|++. +.++|++++|+|.++. |++|.+++..+.+.... +.+........+........
T Consensus 62 ~n-----~g~~~~~n~~~~~----a~~~~i~~ld~D~~~~-~~~l~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 129 (169)
T PF00535_consen 62 EN-----LGFSAARNRGIKH----AKGEYILFLDDDDIIS-PDWLEELVEALEKNPPD--VVIGSVIYIDDDNRYPDRRL 129 (169)
T ss_dssp CC-----SHHHHHHHHHHHH------SSEEEEEETTEEE--TTHHHHHHHHHHHCTTE--EEEEEEEEEECTTETEECCC
T ss_pred cc-----ccccccccccccc----cceeEEEEeCCCceEc-HHHHHHHHHHHHhCCCc--EEEEEEEEecCCcccccccc
Confidence 53 5899999999999 8999999999999998 99999999999864321 22222221111111000000
Q ss_pred H--HHHHHHHHHHHHHhhcCCccccccceEEEccccccc
Q 008144 338 G--RFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYAD 374 (576)
Q Consensus 338 ~--~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~AL~~i 374 (576)
. .....+..............++|+++++||++++.+
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~ 168 (169)
T PF00535_consen 130 RFSFWNRFERKIFNNIRFWKISFFIGSCALFRRSVFEEI 168 (169)
T ss_dssp TSEEEECCHCHHHHTTHSTTSSEESSSCEEEEEHHHHHC
T ss_pred chhhhhhhhhHHHHhhhcCCcccccccEEEEEHHHHHhh
Confidence 0 000112222333445566788999999999999764
No 59
>PRK10018 putative glycosyl transferase; Provisional
Probab=99.59 E-value=1.2e-13 Score=142.59 Aligned_cols=109 Identities=16% Similarity=0.269 Sum_probs=86.2
Q ss_pred CCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCc
Q 008144 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (576)
Q Consensus 93 ~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p 172 (576)
..|.|+|+||||| ++ +.+.+||.|+++++||. ++|+|+||||++ .+.+.+.+
T Consensus 3 ~~p~VSVIip~yN---~~-~~l~~~l~Svl~Qt~~~--~EiIVVDDgS~~--~~~~~~~~-------------------- 54 (279)
T PRK10018 3 DNPLISIYMPTWN---RQ-QLAIRAIKSVLRQDYSN--WEMIIVDDCSTS--WEQLQQYV-------------------- 54 (279)
T ss_pred CCCEEEEEEEeCC---CH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCC--HHHHHHHH--------------------
Confidence 3689999999999 55 47889999999999997 999999999984 22111100
Q ss_pred ccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEE
Q 008144 173 QAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLV 252 (576)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~ 252 (576)
+++ ..|++.
T Consensus 55 -----------------------------~~~------------------------------------------~~~ri~ 63 (279)
T PRK10018 55 -----------------------------TAL------------------------------------------NDPRIT 63 (279)
T ss_pred -----------------------------HHc------------------------------------------CCCCEE
Confidence 000 013578
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc
Q 008144 253 YVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (576)
Q Consensus 253 yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~ 310 (576)
|+..++ +.|++.|+|.|+.. ++|+||+++|+|.+.. |+.|.+++.++.
T Consensus 64 ~i~~~~-----n~G~~~a~N~gi~~----a~g~~I~~lDaDD~~~-p~~l~~~~~~~~ 111 (279)
T PRK10018 64 YIHNDI-----NSGACAVRNQAIML----AQGEYITGIDDDDEWT-PNRLSVFLAHKQ 111 (279)
T ss_pred EEECCC-----CCCHHHHHHHHHHH----cCCCEEEEECCCCCCC-ccHHHHHHHHHH
Confidence 887654 47899999999999 8999999999999998 999998888764
No 60
>PRK10063 putative glycosyl transferase; Provisional
Probab=99.57 E-value=1.5e-13 Score=139.33 Aligned_cols=101 Identities=17% Similarity=0.080 Sum_probs=75.6
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHHcCC-CCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCcc
Q 008144 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALD-YPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQ 173 (576)
Q Consensus 95 P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ld-YP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~ 173 (576)
|.|+|+||||| |+ +.+.+||.|+.++. .+...++|+|+||||+|.|.+.+.+
T Consensus 1 ~~vSVIi~~yN---~~-~~l~~~l~sl~~~~~~~~~~~EiIVvDdgStD~t~~i~~~----------------------- 53 (248)
T PRK10063 1 MLLSVITVAFR---NL-EGIVKTHASLRHLAQDPGISFEWIVVDGGSNDGTREFLEN----------------------- 53 (248)
T ss_pred CeEEEEEEeCC---CH-HHHHHHHHHHHHHHhCCCCCEEEEEEECcCcccHHHHHHH-----------------------
Confidence 67999999999 54 58999999998642 2222499999999999988643321
Q ss_pred cccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEE
Q 008144 174 AYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVY 253 (576)
Q Consensus 174 ~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~y 253 (576)
|.+ . .++.+
T Consensus 54 ---------------------------~~~-------------------------------------------~-~~i~~ 62 (248)
T PRK10063 54 ---------------------------LNG-------------------------------------------I-FNLRF 62 (248)
T ss_pred ---------------------------hcc-------------------------------------------c-CCEEE
Confidence 000 0 12566
Q ss_pred EeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHH
Q 008144 254 VSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQ 304 (576)
Q Consensus 254 v~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~ 304 (576)
++.+ +.|+++|+|.|++. ++||+|+++|+|.... |+.++.
T Consensus 63 i~~~------~~G~~~A~N~Gi~~----a~g~~v~~ld~DD~~~-~~~~~~ 102 (248)
T PRK10063 63 VSEP------DNGIYDAMNKGIAM----AQGRFALFLNSGDIFH-QDAANF 102 (248)
T ss_pred EECC------CCCHHHHHHHHHHH----cCCCEEEEEeCCcccC-cCHHHH
Confidence 6532 25899999999999 8999999999999997 887643
No 61
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=99.54 E-value=7.3e-14 Score=132.14 Aligned_cols=165 Identities=15% Similarity=0.077 Sum_probs=108.4
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCccccccc
Q 008144 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (576)
Q Consensus 99 V~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (576)
|+||+|| |+ +.+.+|+.|+.++.|+....+|+|+|||+++.|.+.+.+.
T Consensus 1 iii~~~n---~~-~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~~~~~~~~--------------------------- 49 (185)
T cd04179 1 VVIPAYN---EE-ENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAEIAREL--------------------------- 49 (185)
T ss_pred CeecccC---hH-hhHHHHHHHHHHHhccCCCEEEEEEcCCCCCChHHHHHHH---------------------------
Confidence 6899999 55 5899999999999986556999999999999875433221
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEEEeccC
Q 008144 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (576)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv~Rek 258 (576)
.+ ..|.+.++..++
T Consensus 50 -----------------------~~-------------------------------------------~~~~~~~~~~~~ 63 (185)
T cd04179 50 -----------------------AA-------------------------------------------RVPRVRVIRLSR 63 (185)
T ss_pred -----------------------HH-------------------------------------------hCCCeEEEEccC
Confidence 00 012345555544
Q ss_pred CCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCcceEEEcccceeccCCccChHHH
Q 008144 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDG 338 (576)
Q Consensus 259 rpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~~~ 338 (576)
..||++|+|.+++. +.+|+++++|+|..+. |++|.+++..+.++. .++|..+....+......+..
T Consensus 64 -----n~G~~~a~n~g~~~----a~gd~i~~lD~D~~~~-~~~l~~l~~~~~~~~----~~~v~g~~~~~~~~~~~~~~~ 129 (185)
T cd04179 64 -----NFGKGAAVRAGFKA----ARGDIVVTMDADLQHP-PEDIPKLLEKLLEGG----ADVVIGSRFVRGGGAGMPLLR 129 (185)
T ss_pred -----CCCccHHHHHHHHH----hcCCEEEEEeCCCCCC-HHHHHHHHHHHhccC----CcEEEEEeecCCCcccchHHH
Confidence 35799999999999 8899999999999997 999999999866444 356666655443211111111
Q ss_pred HH-HHHHHHHHHHHhhcCCccccccceEEEccccccc
Q 008144 339 RF-RSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYAD 374 (576)
Q Consensus 339 ~~-~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~AL~~i 374 (576)
.. ...+................|...++||+++..+
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~i 166 (185)
T cd04179 130 RLGSRLFNFLIRLLLGVRISDTQSGFRLFRREVLEAL 166 (185)
T ss_pred HHHHHHHHHHHHHHcCCCCcCCCCceeeeHHHHHHHH
Confidence 11 1111111111122222234455568999999876
No 62
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=99.47 E-value=1.4e-12 Score=123.94 Aligned_cols=107 Identities=12% Similarity=0.064 Sum_probs=65.1
Q ss_pred cEEEEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCcceEEEcccceecc
Q 008144 250 LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHN 329 (576)
Q Consensus 250 ~l~yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n 329 (576)
++.++..++ +.||++|+|.|++. +.+++|+++|+|..+. |++|.+++..+ +++.. + |-+.....+
T Consensus 56 ~i~~i~~~~-----n~G~~~a~n~g~~~----a~~d~i~~~D~D~~~~-~~~l~~l~~~~-~~~~~--~--v~g~~~~~~ 120 (181)
T cd04187 56 RVKVIRLSR-----NFGQQAALLAGLDH----ARGDAVITMDADLQDP-PELIPEMLAKW-EEGYD--V--VYGVRKNRK 120 (181)
T ss_pred CEEEEEecC-----CCCcHHHHHHHHHh----cCCCEEEEEeCCCCCC-HHHHHHHHHHH-hCCCc--E--EEEEecCCc
Confidence 466666544 36899999999999 8899999999999997 99999999874 33322 2 221111111
Q ss_pred CCccChHHHHHHHHHHHHHHHHhhcCCccccccceEEEccccccc
Q 008144 330 INKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYAD 374 (576)
Q Consensus 330 ~~~~d~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~AL~~i 374 (576)
...........+........+..-+...|+..++||+++..+
T Consensus 121 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~i 162 (181)
T cd04187 121 ---ESWLKRLTSKLFYRLINKLSGVDIPDNGGDFRLMDRKVVDAL 162 (181)
T ss_pred ---chHHHHHHHHHHHHHHHHHcCCCCCCCCCCEEEEcHHHHHHH
Confidence 111111111111112222222333345666788999999876
No 63
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=99.44 E-value=1.8e-12 Score=132.56 Aligned_cols=151 Identities=14% Similarity=-0.056 Sum_probs=92.7
Q ss_pred CcEEEEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCcceEEEcccceec
Q 008144 249 PLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFH 328 (576)
Q Consensus 249 P~l~yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~ 328 (576)
|++.|+..++ +.|.|+|+|.|++.+-. .++|+|+++|.|++++ ++++.+++..+..+. ..+++|. |..+.
T Consensus 45 ~~i~~i~~~~-----N~G~a~a~N~Gi~~a~~-~~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~~--~~~~~~~-~~~~~ 114 (281)
T TIGR01556 45 QKIALIHLGD-----NQGIAGAQNQGLDASFR-RGVQGVLLLDQDSRPG-NAFLAAQWKLLSAEN--GQACALG-PRFFD 114 (281)
T ss_pred CCeEEEECCC-----CcchHHHHHHHHHHHHH-CCCCEEEEECCCCCCC-HHHHHHHHHHHHhcC--CceEEEC-CeEEc
Confidence 3577787654 36899999999998310 2689999999999998 999999998876431 1266664 43332
Q ss_pred cCCccChHHH--HHHHHHHHH-HHHHhh-cCCccccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCC
Q 008144 329 NINKYDIYDG--RFRSAYCVQ-WQGMDG-LKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNAN 404 (576)
Q Consensus 329 n~~~~d~~~~--~~~~f~~~~-~~g~d~-~~g~~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~ 404 (576)
. .....+.. ......... ...... ....+..++|+++||+++..++
T Consensus 115 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~li~~~~~~~iG----------------------------- 164 (281)
T TIGR01556 115 R-GTSRRLPAIHLDGLLLRQISLDGLTTPQKTSFLISSGCLITREVYQRLG----------------------------- 164 (281)
T ss_pred C-CCcccCCceeecccceeeecccccCCceeccEEEcCcceeeHHHHHHhC-----------------------------
Confidence 2 11111100 000000000 000011 1122456788999999998663
Q ss_pred CCCCchhHHHhhcccccccccccCcccccccccCC--CccccHHHHHHHHhcCCeEEEeCCCCCeeEee
Q 008144 405 GENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQ--SVSEDLFTGFILHCKGWTSTYLTPFRPQFLGT 471 (576)
Q Consensus 405 ~~~~~~~~~~~a~~v~~c~ye~~t~wg~~~G~~~~--sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~ 471 (576)
||+++ .=.||++.++|+.++||++.+++. +...-.
T Consensus 165 ------------------------------~fde~~fi~~~D~e~~~R~~~~G~~i~~~~~--~~~~H~ 201 (281)
T TIGR01556 165 ------------------------------MMDEELFIDHVDTEWSLRAQNYGIPLYIDPD--IVLEHR 201 (281)
T ss_pred ------------------------------CccHhhcccchHHHHHHHHHHCCCEEEEeCC--EEEEEe
Confidence 33332 114899999999999999999973 444433
No 64
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=99.43 E-value=3.5e-11 Score=126.73 Aligned_cols=42 Identities=14% Similarity=0.089 Sum_probs=38.8
Q ss_pred CCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc
Q 008144 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (576)
Q Consensus 264 ~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~ 310 (576)
+.||++|+|+|++. ++||+++++|||.+.+ |+.+.+++..+.
T Consensus 75 n~G~~~A~~~G~~~----A~gd~vv~~DaD~q~~-p~~i~~l~~~~~ 116 (325)
T PRK10714 75 NYGQHSAIMAGFSH----VTGDLIITLDADLQNP-PEEIPRLVAKAD 116 (325)
T ss_pred CCCHHHHHHHHHHh----CCCCEEEEECCCCCCC-HHHHHHHHHHHH
Confidence 36899999999999 8999999999999997 999999998875
No 65
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=99.41 E-value=3.7e-12 Score=133.09 Aligned_cols=118 Identities=18% Similarity=0.102 Sum_probs=85.6
Q ss_pred CCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCC
Q 008144 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTIC 171 (576)
Q Consensus 92 ~~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~ 171 (576)
...|.|+|+||+|| |+ +.|.++|.++.++.++....+|+|+||||+|.|.+.+.+ ++.+
T Consensus 28 ~~~~~vSVVIPayN---ee-~~I~~~l~sl~~~~~~~~~~EIIVVDDgStD~T~~ia~~--------------~~~~--- 86 (306)
T PRK13915 28 KAGRTVSVVLPALN---EE-ETVGKVVDSIRPLLMEPLVDELIVIDSGSTDATAERAAA--------------AGAR--- 86 (306)
T ss_pred cCCCCEEEEEecCC---cH-HHHHHHHHHHHHHhccCCCcEEEEEeCCCccHHHHHHHH--------------hcch---
Confidence 35689999999999 55 579999999998765222469999999999988643322 1100
Q ss_pred cccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcE
Q 008144 172 PQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLL 251 (576)
Q Consensus 172 p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l 251 (576)
.+. ..
T Consensus 87 ----------------------------v~~-----------------------------------------------~~ 91 (306)
T PRK13915 87 ----------------------------VVS-----------------------------------------------RE 91 (306)
T ss_pred ----------------------------hhc-----------------------------------------------ch
Confidence 000 00
Q ss_pred EEEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCC-CCchHHHHHHHHHhc-CCCC
Q 008144 252 VYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMY-CNDPTSARQAMCFHL-DPKI 314 (576)
Q Consensus 252 ~yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~-~~~pd~L~~~v~~f~-Dp~~ 314 (576)
..+.+. + .+.||++|+|.|+.. +++|+|+++|||.+ ++ |+++.+++..+. ||++
T Consensus 92 ~~~~~~--~--~n~Gkg~A~~~g~~~----a~gd~vv~lDaD~~~~~-p~~l~~l~~~l~~~~~~ 147 (306)
T PRK13915 92 EILPEL--P--PRPGKGEALWRSLAA----TTGDIVVFVDADLINFD-PMFVPGLLGPLLTDPGV 147 (306)
T ss_pred hhhhcc--c--cCCCHHHHHHHHHHh----cCCCEEEEEeCccccCC-HHHHHHHHHHHHhCCCc
Confidence 001010 0 246899999999998 89999999999997 66 999999999886 7773
No 66
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=99.38 E-value=1.6e-11 Score=126.50 Aligned_cols=130 Identities=18% Similarity=0.198 Sum_probs=84.0
Q ss_pred CChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHH---hc-CCCCCcceEEEcccceeccCCccChHHHHH
Q 008144 265 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCF---HL-DPKISSSLAFVQFPQKFHNINKYDIYDGRF 340 (576)
Q Consensus 265 ~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~---f~-Dp~~g~~vg~VQ~pq~f~n~~~~d~~~~~~ 340 (576)
-++|.|+|.|+.. +++|+|+++|+|+++. |+++.+++.+ +. ++. +++-.|..+.+......+....
T Consensus 74 f~~a~arN~g~~~----A~~d~l~flD~D~i~~-~~~i~~~~~~~~~l~~~~~-----~~~~~p~~yl~~~~~~~~~~~~ 143 (281)
T PF10111_consen 74 FSRAKARNIGAKY----ARGDYLIFLDADCIPS-PDFIEKLLNHVKKLDKNPN-----AFLVYPCLYLSEEGSEKFYSQF 143 (281)
T ss_pred cCHHHHHHHHHHH----cCCCEEEEEcCCeeeC-HHHHHHHHHHHHHHhcCCC-----ceEEEeeeeccchhhHHHhhcc
Confidence 4899999999999 8999999999999998 9999999983 22 332 3455565555432222221111
Q ss_pred H-----HHHHHHHHH-HhhcCCccccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCCCCCchhHHH
Q 008144 341 R-----SAYCVQWQG-MDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQE 414 (576)
Q Consensus 341 ~-----~f~~~~~~g-~d~~~g~~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (576)
. .+.+....+ .+.++.....|++.+++|+.+..+|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~r~~f~~iG--------------------------------------- 184 (281)
T PF10111_consen 144 KNLWDHEFLESFISGKNSLWEFIAFASSCFLINREDFLEIG--------------------------------------- 184 (281)
T ss_pred hhcchHHHHHHHhhccccccccccccceEEEEEHHHHHHhC---------------------------------------
Confidence 0 011111111 1222223345666789999988763
Q ss_pred hhcccccccccccCcccccccccCCC---ccccHHHHHHHHhcCCeEEEeCC
Q 008144 415 ETGVLASCSYEHQTKWGEEVGILYQS---VSEDLFTGFILHCKGWTSTYLTP 463 (576)
Q Consensus 415 ~a~~v~~c~ye~~t~wg~~~G~~~~s---itED~~t~~rl~~~Gwrs~y~~~ 463 (576)
||++.- =-||++++.||...|.+..+++.
T Consensus 185 --------------------GfDE~f~G~G~ED~D~~~RL~~~~~~~~~~~~ 216 (281)
T PF10111_consen 185 --------------------GFDERFRGWGYEDIDFGYRLKKAGYKFKRSPD 216 (281)
T ss_pred --------------------CCCccccCCCcchHHHHHHHHHcCCcEecChH
Confidence 443321 15999999999999999888763
No 67
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=99.34 E-value=2.4e-11 Score=108.32 Aligned_cols=113 Identities=28% Similarity=0.281 Sum_probs=83.0
Q ss_pred EEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCccccccc
Q 008144 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (576)
Q Consensus 99 V~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (576)
|+||++| |+ ..+..|+.+++.++|+. .+|+|+||++++.+...+.+..+
T Consensus 1 iii~~~~---~~-~~l~~~l~s~~~~~~~~--~~i~i~~~~~~~~~~~~~~~~~~------------------------- 49 (156)
T cd00761 1 VIIPAYN---EE-PYLERCLESLLAQTYPN--FEVIVVDDGSTDGTLEILEEYAK------------------------- 49 (156)
T ss_pred CEEeecC---cH-HHHHHHHHHHHhCCccc--eEEEEEeCCCCccHHHHHHHHHh-------------------------
Confidence 5899999 65 68999999999999965 89999999999866543222110
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEEEeccC
Q 008144 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (576)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv~Rek 258 (576)
. .+...++..++
T Consensus 50 ------------------------~--------------------------------------------~~~~~~~~~~~ 61 (156)
T cd00761 50 ------------------------K--------------------------------------------DPRVIRVINEE 61 (156)
T ss_pred ------------------------c--------------------------------------------CCCeEEEEecC
Confidence 0 00133343332
Q ss_pred CCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHH-hcCCCCCcceEEEccc
Q 008144 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCF-HLDPKISSSLAFVQFP 324 (576)
Q Consensus 259 rpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~-f~Dp~~g~~vg~VQ~p 324 (576)
+.+|++++|.++.. .++++++++|+|.++. |+++..++.. ..+++ .++|+++
T Consensus 62 -----~~g~~~~~~~~~~~----~~~d~v~~~d~D~~~~-~~~~~~~~~~~~~~~~----~~~v~~~ 114 (156)
T cd00761 62 -----NQGLAAARNAGLKA----ARGEYILFLDADDLLL-PDWLERLVAELLADPE----ADAVGGP 114 (156)
T ss_pred -----CCChHHHHHHHHHH----hcCCEEEEECCCCccC-ccHHHHHHHHHhcCCC----ceEEecc
Confidence 47899999999999 7899999999999997 9999887444 44655 4566544
No 68
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]
Probab=99.34 E-value=4.7e-12 Score=144.50 Aligned_cols=167 Identities=19% Similarity=0.257 Sum_probs=116.1
Q ss_pred CChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc-CCCCCcceEEEcccceeccCCccChH--HHHHH
Q 008144 265 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNINKYDIY--DGRFR 341 (576)
Q Consensus 265 ~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~-Dp~~g~~vg~VQ~pq~f~n~~~~d~~--~~~~~ 341 (576)
++|--.+|.+..... ..-+||+++|+|+.+. |+++.+++.-|. ||++|..+| | ..|.. +... .+.++
T Consensus 424 ~~~r~~~y~~~~~L~--~~v~~il~vD~dT~~~-P~ai~~lv~~f~~dp~VggaCG--~----I~~~~-~~w~v~~Q~FE 493 (862)
T KOG2571|consen 424 NQHRWVMYTAFKALM--PSVDYILVVDADTRLD-PDALYHLVKVFDEDPQVGGACG--R----ILNKG-GSWVVAYQNFE 493 (862)
T ss_pred HHHHHHHHHHHHHhc--CcceEEEEecCCCccC-cHHHHHHHHHhccCcccceecc--c----cccCC-CceEEeHHHHH
Confidence 345566677766643 5557999999999997 999999999997 999766555 2 22221 1111 22222
Q ss_pred HH-HHHHHHHHhhcCCccccccce--EEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCCCCCchhHHHhhcc
Q 008144 342 SA-YCVQWQGMDGLKGPVLSGTGY--YIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGV 418 (576)
Q Consensus 342 ~f-~~~~~~g~d~~~g~~~~Gtg~--~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 418 (576)
.. -...+++.+..-|-+.|-.|| +||-+||.+-.+ +..+|
T Consensus 494 Y~Ish~l~Ka~ESvFG~VsclPGcfs~yR~~aL~~~~~----~~~y~--------------------------------- 536 (862)
T KOG2571|consen 494 YAISHNLQKATESVFGCVSCLPGCFSLYRASALMDQFV----EYFYG--------------------------------- 536 (862)
T ss_pred HHHHHHHHHhhhhhceeEEecCchhHHHHHHHHhcchH----Hhhhc---------------------------------
Confidence 22 123456778877877777776 599999975311 11111
Q ss_pred cccccccccCcccccccccCCCccccHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHHHHHHHhhhh
Q 008144 419 LASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSG 489 (576)
Q Consensus 419 v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~RWa~G 489 (576)
++.-|..-|..+ +..||-.+..++..+||++-|+. ++.+.+++|+++.+++.||+||..|
T Consensus 537 --------~~~~~~~~~~~~-~~geDR~L~~~llskgy~l~Y~a--~s~a~t~~Pe~~~efl~QrrRW~~s 596 (862)
T KOG2571|consen 537 --------EKFSGPRHGIQY-SLGEDRWLCTLLLSKGYRLKYVA--ASDAETEAPESFLEFLNQRRRWLNS 596 (862)
T ss_pred --------hhhcCccccccc-ccchhHHHHHHHHhccceeeeec--cccccccCcHhHHHHHHHhhhhccc
Confidence 111111124444 38999999999999999999998 5899999999999999999999999
No 69
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=99.33 E-value=1.6e-11 Score=127.81 Aligned_cols=201 Identities=18% Similarity=0.181 Sum_probs=133.1
Q ss_pred CCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCcc
Q 008144 94 LPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQ 173 (576)
Q Consensus 94 ~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~ 173 (576)
.|.+.++|+|||+. +.+.+++.++.+++||. ..|+++|+|++|.|.+.+.+.
T Consensus 2 ~~~i~~iiv~yn~~----~~l~~~l~~l~~~~~~~--~~iv~vDn~s~d~~~~~~~~~---------------------- 53 (305)
T COG1216 2 MPKISIIIVTYNRG----EDLVECLASLAAQTYPD--DVIVVVDNGSTDGSLEALKAR---------------------- 53 (305)
T ss_pred CcceEEEEEecCCH----HHHHHHHHHHhcCCCCC--cEEEEccCCCCCCCHHHHHhh----------------------
Confidence 47899999999953 58999999999999998 455589999999875422210
Q ss_pred cccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEE
Q 008144 174 AYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVY 253 (576)
Q Consensus 174 ~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~y 253 (576)
..|++.+
T Consensus 54 -------------------------------------------------------------------------~~~~v~~ 60 (305)
T COG1216 54 -------------------------------------------------------------------------FFPNVRL 60 (305)
T ss_pred -------------------------------------------------------------------------cCCcEEE
Confidence 0246788
Q ss_pred EeccCCCCCCCCChHHHHHHHHHHcCCCCCCC-EEEEeCCCCCCCchHHHHHHHHHhc-CCCCCcceEEEcccceeccCC
Q 008144 254 VSREKRPEHLHHFKAGALNVLLRVSGVISNSP-YILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNIN 331 (576)
Q Consensus 254 v~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge-~Il~lDAD~~~~~pd~L~~~v~~f~-Dp~~g~~vg~VQ~pq~f~n~~ 331 (576)
+.-.+ +.|=||+.|.+++.+. +++. ++++++-|++++ |++|.+++..+. ++. .++|+......+..
T Consensus 61 i~~~~-----NlG~agg~n~g~~~a~--~~~~~~~l~LN~D~~~~-~~~l~~ll~~~~~~~~----~~~~~~~i~~~~~~ 128 (305)
T COG1216 61 IENGE-----NLGFAGGFNRGIKYAL--AKGDDYVLLLNPDTVVE-PDLLEELLKAAEEDPA----AGVVGPLIRNYDES 128 (305)
T ss_pred EEcCC-----CccchhhhhHHHHHHh--cCCCcEEEEEcCCeeeC-hhHHHHHHHHHHhCCC----CeEeeeeEecCCCC
Confidence 86554 4678999999999842 3433 999999999997 999999999887 555 45554433322211
Q ss_pred cc-ChHHHHHHHHHHHHHHH-----------HhhcCCccccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhh
Q 008144 332 KY-DIYDGRFRSAYCVQWQG-----------MDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYK 399 (576)
Q Consensus 332 ~~-d~~~~~~~~f~~~~~~g-----------~d~~~g~~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~ 399 (576)
.. +..+.....+....... .+...+ .++|.++++||+++..++
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~~li~~~~~~~vG------------------------ 183 (305)
T COG1216 129 LYIDRRGGESDGLTGGWRASPLLEIAPDLSSYLEVVA-SLSGACLLIRREAFEKVG------------------------ 183 (305)
T ss_pred cchheeccccccccccceecccccccccccchhhhhh-hcceeeeEEcHHHHHHhC------------------------
Confidence 00 00000000000000000 000000 367888999999998763
Q ss_pred cccCCCCCCchhHHHhhcccccccccccCcccccccccCC--CccccHHHHHHHHhcCCeEEEeCCCCCeeE
Q 008144 400 QNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQ--SVSEDLFTGFILHCKGWTSTYLTPFRPQFL 469 (576)
Q Consensus 400 ~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~~G~~~~--sitED~~t~~rl~~~Gwrs~y~~~~~~~~~ 469 (576)
||+.+ .-.||++.++|+...||++.|++. +..+
T Consensus 184 -----------------------------------~~de~~F~y~eD~D~~~R~~~~G~~i~~~p~--a~i~ 218 (305)
T COG1216 184 -----------------------------------GFDERFFIYYEDVDLCLRARKAGYKIYYVPD--AIIY 218 (305)
T ss_pred -----------------------------------CCCcccceeehHHHHHHHHHHcCCeEEEeec--cEEE
Confidence 33332 346999999999999999999984 4444
No 70
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.08 E-value=1.1e-09 Score=99.86 Aligned_cols=47 Identities=23% Similarity=0.306 Sum_probs=42.8
Q ss_pred CCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchH
Q 008144 94 LPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLH 146 (576)
Q Consensus 94 ~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~ 146 (576)
.|.++|+||||| |+ ..+.++|.|++++.|+. .+|+|+||||+|.|.+
T Consensus 2 ~~~~siiip~~n---~~-~~l~~~l~s~~~q~~~~--~eiivvddgs~d~t~~ 48 (291)
T COG0463 2 MPKVSVVIPTYN---EE-EYLPEALESLLNQTYKD--FEIIVVDDGSTDGTTE 48 (291)
T ss_pred CccEEEEEeccc---hh-hhHHHHHHHHHhhhhcc--eEEEEEeCCCCCChHH
Confidence 588999999999 55 68999999999999998 7899999999998864
No 71
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=99.02 E-value=2.8e-09 Score=106.12 Aligned_cols=43 Identities=19% Similarity=0.248 Sum_probs=39.0
Q ss_pred CChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCC
Q 008144 265 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDP 312 (576)
Q Consensus 265 ~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp 312 (576)
.+++.+.|.|+.. +.+++|+++|+|..+. |+.+.++...+.++
T Consensus 57 ~g~~~~~n~~~~~----a~~d~vl~lDaD~~~~-~~~~~~l~~~~~~~ 99 (229)
T cd02511 57 DGFGAQRNFALEL----ATNDWVLSLDADERLT-PELADEILALLATD 99 (229)
T ss_pred CChHHHHHHHHHh----CCCCEEEEEeCCcCcC-HHHHHHHHHHHhCC
Confidence 6899999999999 8999999999999997 99999988887643
No 72
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=98.67 E-value=1e-07 Score=99.65 Aligned_cols=228 Identities=16% Similarity=0.195 Sum_probs=149.1
Q ss_pred CCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCC
Q 008144 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTIC 171 (576)
Q Consensus 92 ~~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~ 171 (576)
..+|+|+|+-|--+ -+ +.+.+-+++-...+|| ++|++.+=+.++|.-.+ +. +
T Consensus 82 ~~LPgVSiikPl~G---~d-~nl~~Nlesffts~Y~--~~ElLfcv~s~eDpAi~----vv----------~-------- 133 (431)
T KOG2547|consen 82 PKLPGVSIIKPLKG---VD-PNLYHNLESFFTSQYH--KYELLFCVESSEDPAIE----VV----------E-------- 133 (431)
T ss_pred CCCCCceEEeeccc---CC-chhHHhHHHHHhhccC--ceEEEEEEccCCCcHHH----HH----------H--------
Confidence 47999999999998 34 3788899999999999 59999776666663211 10 0
Q ss_pred cccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcE
Q 008144 172 PQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLL 251 (576)
Q Consensus 172 p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l 251 (576)
++-++|+. + + .-
T Consensus 134 ------------------------~Ll~kyp~----------------------V-d---------------------Ak 145 (431)
T KOG2547|consen 134 ------------------------RLLKKYPN----------------------V-D---------------------AK 145 (431)
T ss_pred ------------------------HHHhhCCC----------------------c-c---------------------eE
Confidence 11122321 1 0 12
Q ss_pred EEEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCcceEEE-cccceeccC
Q 008144 252 VYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFV-QFPQKFHNI 330 (576)
Q Consensus 252 ~yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~~g~~vg~V-Q~pq~f~n~ 330 (576)
.++..++ -| -.-|-.|+=-|.+. ++.|+|++.|.|-.+. ||.+..+..-++.++. +|+| |+|-.+...
T Consensus 146 lf~gG~~-vg--~npKInN~mpgy~~----a~ydlvlisDsgI~m~-pdtildm~t~M~shek---malvtq~py~~dr~ 214 (431)
T KOG2547|consen 146 LFFGGEK-VG--LNPKINNMMPGYRA----AKYDLVLISDSGIFMK-PDTILDMATTMMSHEK---MALVTQTPYCKDRQ 214 (431)
T ss_pred EEEcccc-cc--cChhhhccCHHHHH----hcCCEEEEecCCeeec-CchHHHHHHhhhcccc---eeeecCCceeeccc
Confidence 3444443 12 34588888888898 8999999999999997 9999999888876553 7887 677655422
Q ss_pred CccChHHHHHHHHHHHHHHH----HhhcCCccccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCCC
Q 008144 331 NKYDIYDGRFRSAYCVQWQG----MDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGE 406 (576)
Q Consensus 331 ~~~d~~~~~~~~f~~~~~~g----~d~~~g~~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~ 406 (576)
++...-++ +||...... -+-.+-.+.+|-.|+.|+++|+..+.. .+
T Consensus 215 --Gf~atle~-~~fgTsh~r~yl~~n~~~~~c~tgms~~mrK~~ld~~ggi----~~----------------------- 264 (431)
T KOG2547|consen 215 --GFDATLEQ-VYFGTSHPRIYLSGNVLGFNCSTGMSSMMRKEALDECGGI----SA----------------------- 264 (431)
T ss_pred --cchhhhhh-eeeccCCceEEEccccccccccccHHHHHHHHHHHHhccH----HH-----------------------
Confidence 11111111 233322111 011111233455578999998765311 00
Q ss_pred CCchhHHHhhcccccccccccCcccccccccCCCccccHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHHHHHHHh
Q 008144 407 NFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRW 486 (576)
Q Consensus 407 ~~~~~~~~~a~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~RW 486 (576)
.| +.+.||+..+-.+..+|||+.+.. .++--..+-.+...+..|-.||
T Consensus 265 ---------------------------f~---~yLaedyFaaksllSRG~ksaist--~palQnSas~~mssf~~Ri~rw 312 (431)
T KOG2547|consen 265 ---------------------------FG---GYLAEDYFAAKSLLSRGWKSAIST--HPALQNSASVTMSSFLDRIIRW 312 (431)
T ss_pred ---------------------------HH---HHHHHHHHHHHHHHhhhhhhhhcc--cchhhhhhhhHHHHHHHHHHHh
Confidence 12 367899999999999999999987 3555566667888888888899
Q ss_pred hh
Q 008144 487 GS 488 (576)
Q Consensus 487 a~ 488 (576)
..
T Consensus 313 vk 314 (431)
T KOG2547|consen 313 VK 314 (431)
T ss_pred hh
Confidence 64
No 73
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=98.57 E-value=1.1e-06 Score=84.42 Aligned_cols=105 Identities=15% Similarity=0.127 Sum_probs=64.8
Q ss_pred cEEEEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCcceEEEcccceecc
Q 008144 250 LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHN 329 (576)
Q Consensus 250 ~l~yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n 329 (576)
++....|.+ .-|-.-|--+|+.+ +.|+|+++.|||-.-+ |.++-+.+....+-+ ..+|-.- +|..
T Consensus 64 ~i~l~pR~~-----klGLgtAy~hgl~~----a~g~fiviMDaDlsHh-Pk~ipe~i~lq~~~~----~div~GT-RYa~ 128 (238)
T KOG2978|consen 64 NILLKPRTK-----KLGLGTAYIHGLKH----ATGDFIVIMDADLSHH-PKFIPEFIRLQKEGN----YDIVLGT-RYAG 128 (238)
T ss_pred cEEEEeccC-----cccchHHHHhhhhh----ccCCeEEEEeCccCCC-chhHHHHHHHhhccC----cceeeee-eEcC
Confidence 577777765 45778899999999 9999999999999887 999988877655443 3444332 2221
Q ss_pred CCccChHHHHHHHHHHHHHHH-------HhhcCCccccccceEEEcccccc
Q 008144 330 INKYDIYDGRFRSAYCVQWQG-------MDGLKGPVLSGTGYYIKRESLYA 373 (576)
Q Consensus 330 ~~~~d~~~~~~~~f~~~~~~g-------~d~~~g~~~~Gtg~~~RR~AL~~ 373 (576)
. +..++ +...=+++-+| .-+.+..-.+|+--.+|++.|.-
T Consensus 129 ~--ggV~g--W~mkRk~IS~gAn~la~~ll~~~~sdltGsFrLykk~vl~~ 175 (238)
T KOG2978|consen 129 G--GGVYG--WDMKRKIISRGANFLARILLNPGVSDLTGSFRLYKKEVLEK 175 (238)
T ss_pred C--Cceec--chhhHHHHhhhhHHHHHHhccCCCccCcceeeeehHHHHHh
Confidence 1 11111 11111222222 22233444677777888888764
No 74
>KOG2977 consensus Glycosyltransferase [General function prediction only]
Probab=98.48 E-value=4.6e-07 Score=92.05 Aligned_cols=113 Identities=20% Similarity=0.150 Sum_probs=81.3
Q ss_pred ceEEEEecCCCCCCChHHHHHHHHHHHcCCCCC---CceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCc
Q 008144 96 AIDVFICTADPEKEPAIGVMNTVLSAMALDYPV---DKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (576)
Q Consensus 96 ~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~---~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p 172 (576)
..+|+||+|||++-=+.++..|+..+- ..|-. =+.+|+|+||||.|.|.+.. +.||+|+|.+
T Consensus 68 ~lsVIVpaynE~~ri~~mldeav~~le-~ry~~~~~F~~eiiVvddgs~d~T~~~a----------~k~s~K~~~d---- 132 (323)
T KOG2977|consen 68 YLSVIVPAYNEEGRIGAMLDEAVDYLE-KRYLSDKSFTYEIIVVDDGSTDSTVEVA----------LKFSRKLGDD---- 132 (323)
T ss_pred eeEEEEecCCcccchHHHHHHHHHHHH-HHhccCCCCceeEEEeCCCCchhHHHHH----------HHHHHHcCcc----
Confidence 789999999976544556666666544 34444 37999999999999886422 2467776631
Q ss_pred ccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEE
Q 008144 173 QAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLV 252 (576)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~ 252 (576)
+++
T Consensus 133 -----------------------------------------------------------------------------~ir 135 (323)
T KOG2977|consen 133 -----------------------------------------------------------------------------NIR 135 (323)
T ss_pred -----------------------------------------------------------------------------eEE
Confidence 356
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCC--CCchHHHHHHHHHh
Q 008144 253 YVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMY--CNDPTSARQAMCFH 309 (576)
Q Consensus 253 yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~--~~~pd~L~~~v~~f 309 (576)
++...+ +.||.||...++.. +.|+++++.|||.- ..|=+.|.+++.-.
T Consensus 136 V~~l~~-----nrgKGgAvR~g~l~----~rG~~ilfadAdGaTkf~d~ekLe~al~~~ 185 (323)
T KOG2977|consen 136 VIKLKK-----NRGKGGAVRKGMLS----SRGQKILFADADGATKFADLEKLEKALNDK 185 (323)
T ss_pred Eeehhc-----cCCCCcceehhhHh----ccCceEEEEcCCCCccCCCHHHHHHHHHhh
Confidence 666544 36899999999999 89999999999953 33456777776543
No 75
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=98.03 E-value=5.3e-05 Score=80.25 Aligned_cols=44 Identities=20% Similarity=0.310 Sum_probs=36.8
Q ss_pred eEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccc
Q 008144 97 IDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPIT 144 (576)
Q Consensus 97 VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T 144 (576)
+-|+|.||| -| +.+.+||.|++++.+-.+..+|+|++||+++.+
T Consensus 2 ~PVlv~ayN---Rp-~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~ 45 (334)
T cd02514 2 IPVLVIACN---RP-DYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEV 45 (334)
T ss_pred cCEEEEecC---CH-HHHHHHHHHHHhccccCCCceEEEEeCCCchHH
Confidence 468999998 54 799999999999874446789999999998744
No 76
>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.91 E-value=0.0029 Score=67.43 Aligned_cols=49 Identities=22% Similarity=0.181 Sum_probs=42.8
Q ss_pred CCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCcc
Q 008144 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPI 143 (576)
Q Consensus 92 ~~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~ 143 (576)
.++|+-+|+|+-+| |...++.+||.|+++..=+.--.+|+++||+|.|.
T Consensus 121 ~dlp~TsviITfHN---EARS~LLRTv~SvlnrsP~~li~EiILVDD~S~Dp 169 (559)
T KOG3738|consen 121 VDLPPTSVIITFHN---EARSTLLRTVVSVLNRSPEHLIHEIILVDDFSQDP 169 (559)
T ss_pred cCCCCceEEEEecc---HHHHHHHHHHHHHHcCChHHhhheeEEecCCCCCh
Confidence 47999999999999 77789999999999987444467999999999984
No 77
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.85 E-value=0.0043 Score=65.92 Aligned_cols=49 Identities=24% Similarity=0.186 Sum_probs=40.7
Q ss_pred CCCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCc
Q 008144 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSP 142 (576)
Q Consensus 91 ~~~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~ 142 (576)
++++|+++|+|.-+| |.-.++++||.|++.-.=|.---+|+++||=|+.
T Consensus 151 pe~Lpt~SVviVFHN---EGws~LmRTVHSVi~RsP~~~l~eivlvDDfSdK 199 (603)
T KOG3737|consen 151 PENLPTSSVVIVFHN---EGWSTLMRTVHSVIKRSPRKYLAEIVLVDDFSDK 199 (603)
T ss_pred cccCCcceEEEEEec---CccHHHHHHHHHHHhcCcHHhhheEEEeccCCcc
Confidence 578999999999999 7778999999999977644434578889998775
No 78
>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.58 E-value=0.0028 Score=71.38 Aligned_cols=117 Identities=22% Similarity=0.152 Sum_probs=86.6
Q ss_pred CCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCC
Q 008144 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTIC 171 (576)
Q Consensus 92 ~~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~ 171 (576)
+.+|+++|+|+-+| |...++.+||.|+....=|.-..+|+++||.++..-+.
T Consensus 139 ~~Lp~~Svii~f~n---E~~s~llRtv~Svi~rtp~~lLkEIiLVdD~S~~~~l~------------------------- 190 (578)
T KOG3736|consen 139 DKLPTTSVIIIFHN---EAWSTLLRTVHSVINRTPPYLLKEIILVDDFSDRDHLK------------------------- 190 (578)
T ss_pred cccCCCceEEEEec---CCCcchhheEEeehccCChhHeEEEEEeecCcchhhhh-------------------------
Confidence 46999999999999 77789999999998877444467899999999863210
Q ss_pred cccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcE
Q 008144 172 PQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLL 251 (576)
Q Consensus 172 p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l 251 (576)
+..++. + +.++.+
T Consensus 191 ---------------------------~~Ld~y---~-------------------------------------k~~~~v 203 (578)
T KOG3736|consen 191 ---------------------------DKLEEY---V-------------------------------------KRFSKV 203 (578)
T ss_pred ---------------------------hhhHHH---H-------------------------------------hhhcce
Confidence 000100 0 001125
Q ss_pred EEEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc-CCC
Q 008144 252 VYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPK 313 (576)
Q Consensus 252 ~yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~-Dp~ 313 (576)
.++..++| .|+-.|.+.|.+. +.||+++++||=+-++ ..+|.-++.... |.+
T Consensus 204 ~i~r~~~R-----~GLIrARl~GA~~----A~geVL~FLDsHcE~n-~gWLePLL~~I~~~r~ 256 (578)
T KOG3736|consen 204 RILRTKKR-----EGLIRARLLGASM----ATGEVLTFLDSHCEVN-VGWLEPLLARIAEDRK 256 (578)
T ss_pred eEEeecch-----hhhHHHHhhhhhh----hhchheeeeecceeEe-cCcchHHHHHhhhcCc
Confidence 56666554 5799999999888 9999999999999997 899988887665 554
No 79
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=95.11 E-value=0.11 Score=44.36 Aligned_cols=33 Identities=27% Similarity=0.317 Sum_probs=26.8
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchH
Q 008144 109 EPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLH 146 (576)
Q Consensus 109 E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~ 146 (576)
|. ..+...|..-+++.+- ++||.||||+|.|.+
T Consensus 3 e~-~~L~~wl~~~~~lG~d----~i~i~d~~s~D~t~~ 35 (97)
T PF13704_consen 3 EA-DYLPEWLAHHLALGVD----HIYIYDDGSTDGTRE 35 (97)
T ss_pred hH-HHHHHHHHHHHHcCCC----EEEEEECCCCccHHH
Confidence 55 5889999998888654 599999999998854
No 80
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=94.45 E-value=0.12 Score=51.73 Aligned_cols=47 Identities=19% Similarity=0.261 Sum_probs=38.0
Q ss_pred CChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHh-cCCCCC
Q 008144 265 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKIS 315 (576)
Q Consensus 265 ~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f-~Dp~~g 315 (576)
..-+.+.|.|++. ++++|++++.-|..+.+++++.+++..| .||+.|
T Consensus 40 ~s~~~~yN~a~~~----a~~~ylvflHqDv~i~~~~~l~~il~~~~~~~~~G 87 (217)
T PF13712_consen 40 KSMAAAYNEAMEK----AKAKYLVFLHQDVFIINENWLEDILEIFEEDPNIG 87 (217)
T ss_dssp S-TTTHHHHHGGG------SSEEEEEETTEE-SSHHHHHHHHHHHHH-TTEE
T ss_pred cCHHHHHHHHHHh----CCCCEEEEEeCCeEEcchhHHHHHHHHHhhCCCcc
Confidence 4577899999999 9999999999999998899999999999 699843
No 81
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.
Probab=93.70 E-value=0.4 Score=48.15 Aligned_cols=37 Identities=16% Similarity=-0.007 Sum_probs=27.6
Q ss_pred CChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHH
Q 008144 265 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSA 302 (576)
Q Consensus 265 ~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L 302 (576)
-.||..||.|...+-...+.+++++-|.|.+|. .+.+
T Consensus 48 FNR~~llNvG~~~a~k~~~~dc~i~hDVDllP~-~~~~ 84 (219)
T cd00899 48 FNRAKLLNVGFLEALKDGDWDCFIFHDVDLLPE-NDRN 84 (219)
T ss_pred chhhhhhhHHHHHHhhcCCccEEEEeccccccc-Cccc
Confidence 458899999776643224578999999999998 4544
No 82
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=90.47 E-value=4.3 Score=42.10 Aligned_cols=56 Identities=13% Similarity=0.092 Sum_probs=42.5
Q ss_pred CCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCC--ccchHhHHHH
Q 008144 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGS--PITLHGMREA 151 (576)
Q Consensus 92 ~~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~--~~T~~~l~Ea 151 (576)
.+-|+|=|+.|--| ++ ..+.+=...+.+++||.+++++-++-.-++ +.|.+.|.++
T Consensus 22 ~~~e~VLILtplrn--a~--~~l~~y~~~L~~L~YP~~lIsLgfLv~d~~e~d~t~~~l~~~ 79 (269)
T PF03452_consen 22 RNKESVLILTPLRN--AA--SFLPDYFDNLLSLTYPHELISLGFLVSDSSEFDNTLKILEAA 79 (269)
T ss_pred ccCCeEEEEEecCC--ch--HHHHHHHHHHHhCCCCchheEEEEEcCCCchhHHHHHHHHHH
Confidence 45689999999998 33 368899999999999999999954444444 6676666544
No 83
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=90.45 E-value=0.48 Score=55.54 Aligned_cols=182 Identities=18% Similarity=0.166 Sum_probs=106.5
Q ss_pred CChHHHHHHHHHHcCCCCCCCEEEEeCC--CCCCCchHHH--HHHHHHhcCCC--------------CCcceEEEcccce
Q 008144 265 HFKAGALNVLLRVSGVISNSPYILGLDC--DMYCNDPTSA--RQAMCFHLDPK--------------ISSSLAFVQFPQK 326 (576)
Q Consensus 265 ~~KAgALN~aL~~~~~~s~ge~Il~lDA--D~~~~~pd~L--~~~v~~f~Dp~--------------~g~~vg~VQ~pq~ 326 (576)
.||..|.|+|+=. ++||++-++|+ |.+++ ++| +.++.=|.+.. ....+++|-++..
T Consensus 274 eGK~eNQNhaiiF----~rGe~lQ~IDmNQDnYle--E~lK~rnlL~Ef~~~~~~~~~~~~~~~~~~~~~~~aIlG~RE~ 347 (817)
T PF02364_consen 274 EGKPENQNHAIIF----TRGEYLQTIDMNQDNYLE--EALKMRNLLEEFEEMHGDSSSPYIPGIEEEGKRPVAILGFREH 347 (817)
T ss_pred CCCccccceeEEE----EccccccccccchhhhHH--HHHHHHHHHHHHHhcCCCCCCCCCCCccccCCCCceEecccce
Confidence 6899999999988 99999999999 55654 333 44555454211 1234667777766
Q ss_pred eccCCcc---ChHHHHHHHHHHHHHHHHhhcCCccccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccC
Q 008144 327 FHNINKY---DIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNA 403 (576)
Q Consensus 327 f~n~~~~---d~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~ 403 (576)
.+..+-+ +-.+.+...|-...++.+...++-+.=|.==++.|--...
T Consensus 348 IFs~~vg~L~~~aa~qE~~F~Tl~qR~la~p~~rlHYGHPD~~n~~f~~T------------------------------ 397 (817)
T PF02364_consen 348 IFSENVGSLGDFAAGQEQSFGTLFQRTLANPLVRLHYGHPDVFNRIFMTT------------------------------ 397 (817)
T ss_pred EecCCcchHHHHhhhhhHHHHHHHHHHHhcchhhccCCCchhhhhhheec------------------------------
Confidence 5543321 2222333344333445444433322222221221111110
Q ss_pred CCCCCchhHHHhhcccccccccccCcccccccc----cCCCccccHHHHHHHHhcCCeEEEeCCCCCeeEeecCC-CHHH
Q 008144 404 NGENFSNVLQEETGVLASCSYEHQTKWGEEVGI----LYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTT-NLND 478 (576)
Q Consensus 404 ~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~~G~----~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~-tl~~ 478 (576)
.||. ..-.++||+..|+.-..||-++.|++ -..+|-.-+ .+.+
T Consensus 398 -----------------------------RGGvSKAsk~lhLsEDIfaG~n~~lRGG~i~h~e---y~qcGKGRD~Gf~~ 445 (817)
T PF02364_consen 398 -----------------------------RGGVSKASKGLHLSEDIFAGMNATLRGGRIKHCE---YIQCGKGRDVGFNS 445 (817)
T ss_pred -----------------------------cCccchHhhcccccHHHHHHHHHHhcCCceeehh---hhhcccccccCchh
Confidence 0121 11278999999999999999999986 345555444 5566
Q ss_pred HHHHHHHhhhhhHHHHhhhcCCcccCCCCCCHHHHHHH
Q 008144 479 LLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCY 516 (576)
Q Consensus 479 ~l~Qr~RWa~G~~qv~~~~~~p~~~~~~~l~~~qrl~y 516 (576)
-..=-.+-+.|+-|..+++.--.+ +.++.+..-+.+
T Consensus 446 I~~F~~KI~~G~GEQ~LSRe~yrL--g~~ld~~R~LSf 481 (817)
T PF02364_consen 446 ILNFETKIASGMGEQMLSREYYRL--GTRLDFFRFLSF 481 (817)
T ss_pred hhhhHhHhcCCccchhhhHHHHHh--hccCCHHHHHHH
Confidence 666667888999988888742112 236777666653
No 84
>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase. This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.
Probab=90.14 E-value=2.3 Score=45.30 Aligned_cols=41 Identities=17% Similarity=0.180 Sum_probs=30.0
Q ss_pred CCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHH
Q 008144 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMC 307 (576)
Q Consensus 264 ~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~ 307 (576)
+.||+-.|=-|+-.+. +...+||-++|||.++ |.++.+-+.
T Consensus 141 R~GKgEGMiiG~lLAk-~~g~~YVGFiDaDNyi--PGaV~EYvk 181 (381)
T TIGR02460 141 RSGKGEGMLLGLLLAK-AIGAEYVGFVDADNYF--PGAVNEYVK 181 (381)
T ss_pred ecCcchHHHHHHHHHH-HhCCceEeEeecccCC--CchHHHHHH
Confidence 4689988887775532 1467999999999999 577765443
No 85
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional
Probab=90.12 E-value=2.1 Score=45.82 Aligned_cols=41 Identities=17% Similarity=0.184 Sum_probs=30.2
Q ss_pred CCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHH
Q 008144 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMC 307 (576)
Q Consensus 264 ~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~ 307 (576)
+.||+-.|=-|+-.+. +...+||-++|||.++ |.++.+-+.
T Consensus 142 R~GKgEGMiiG~lLAk-~~g~~YVGFiDADNyi--PGaV~EYvk 182 (393)
T PRK14503 142 RSGKGEGMIIGLLLAK-ALGARYVGFVDADNYI--PGAVNEYVK 182 (393)
T ss_pred ecCcchHHHHHHHHHH-HhCCCeEeEeecccCC--CchHHHHHH
Confidence 4689988887776532 1467999999999999 577765443
No 86
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=90.01 E-value=1.5 Score=48.35 Aligned_cols=49 Identities=24% Similarity=0.388 Sum_probs=30.4
Q ss_pred CCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCC-CceEEEEEcCCCCccch
Q 008144 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPV-DKLHVYLSDDGGSPITL 145 (576)
Q Consensus 92 ~~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~-~kl~V~V~DDg~~~~T~ 145 (576)
...|.+-|+|-+|| =| .-+.+||.++++.. |. ++..|+|+.||+...|.
T Consensus 90 ~~~~~~pVlV~AcN---Rp-~yl~r~L~sLl~~r-p~~~~fpIiVSQDg~~~~~~ 139 (434)
T PF03071_consen 90 NKEPVIPVLVFACN---RP-DYLRRTLDSLLKYR-PSAEKFPIIVSQDGDDEEVA 139 (434)
T ss_dssp -------EEEEESS----T-T-HHHHHHHHHHH--S-TTTS-EEEEE-TT-HHHH
T ss_pred cCCCcceEEEEecC---Cc-HHHHHHHHHHHHcC-CCCCCccEEEEecCCcHHHH
Confidence 45678999999999 55 57999999999988 65 68899999999987553
No 87
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=89.89 E-value=4.7 Score=41.60 Aligned_cols=80 Identities=20% Similarity=0.191 Sum_probs=43.1
Q ss_pred CCcEEEEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCcce-EEEcccce
Q 008144 248 MPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSL-AFVQFPQK 326 (576)
Q Consensus 248 ~P~l~yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~~g~~v-g~VQ~pq~ 326 (576)
+|++.|++-.. |. +-..-+---|+|...|-.-.+..+|+++|+|++.. .|-..+++..-.-.++...+ |+.--|..
T Consensus 61 ~~~~~yl~~~s-~~-~F~s~~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~S-~dnF~k~l~~~~ikk~~tnI~a~~vlPV~ 137 (346)
T COG4092 61 MPRVLYLDFGS-PE-PFASETICANNGADYSHEKCESNLVLFLDVDCFGS-SDNFAKMLSIATIKKMRTNIDAPLVLPVY 137 (346)
T ss_pred ccceEEEecCC-Cc-cccchhhhhhccchhhhccccccEEEEEecccccc-HHHHHHHHHHHHHHHHHhccCcceeeeee
Confidence 46788886533 11 11112444566666544445789999999999997 45444444222111111113 44445666
Q ss_pred eccC
Q 008144 327 FHNI 330 (576)
Q Consensus 327 f~n~ 330 (576)
+-|-
T Consensus 138 ~LNk 141 (346)
T COG4092 138 HLNK 141 (346)
T ss_pred ecch
Confidence 6664
No 88
>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A.
Probab=88.68 E-value=2.9 Score=44.72 Aligned_cols=40 Identities=15% Similarity=0.226 Sum_probs=26.4
Q ss_pred CCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHH
Q 008144 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAM 306 (576)
Q Consensus 264 ~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v 306 (576)
+.||+-.|=-|+-.+. +...+||-++|||.+. |.++.+-+
T Consensus 141 R~GKgEGMiiGillAk-~~g~~YVGFvDADNyi--PGaV~EYv 180 (381)
T PF09488_consen 141 RNGKGEGMIIGILLAK-APGKRYVGFVDADNYI--PGAVNEYV 180 (381)
T ss_dssp -SSHHHHHHHHHHHHH-HTT-SEEEE--TTBS---HHHHHHHH
T ss_pred ecCchHHHHHHHHHHH-hcCCceEeEeeccCCC--cchHHHHH
Confidence 4689999988876532 1567999999999998 67776544
No 89
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=85.63 E-value=5.5 Score=46.41 Aligned_cols=41 Identities=20% Similarity=0.168 Sum_probs=30.5
Q ss_pred CCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHH
Q 008144 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMC 307 (576)
Q Consensus 264 ~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~ 307 (576)
+.||+-.|=-|+-.+. +...+||.++|||.++ |.++.+-+.
T Consensus 146 r~gk~egm~~g~~la~-~~g~~yvgfidadny~--pg~v~ey~~ 186 (694)
T PRK14502 146 RSGKAEGMILGIILTM-FSGRDYVGFIDTDNYI--PGAVWEYAK 186 (694)
T ss_pred ecCcchHHHHHHHHHH-hcCCceEeEeeccCCC--CchHHHHHH
Confidence 4689988888776532 2567999999999999 567665443
No 90
>PF01644 Chitin_synth_1: Chitin synthase; InterPro: IPR004834 This region is found commonly in chitin synthases classes I, II and III 2.4.1.16 from EC. Chitin a linear homopolymer of GlcNAc residues, it is an important component of the cell wall of fungi and is synthesised on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases []. ; GO: 0004100 chitin synthase activity, 0006031 chitin biosynthetic process
Probab=82.74 E-value=31 Score=33.21 Aligned_cols=49 Identities=16% Similarity=0.099 Sum_probs=33.7
Q ss_pred EEEEeccCCCCCCCCChHH----HHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHh
Q 008144 251 LVYVSREKRPEHLHHFKAG----ALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (576)
Q Consensus 251 l~yv~Rekrpg~~~~~KAg----ALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f 309 (576)
+.+.-.|+| .+|=. -.|+.-++ -+.++++.+|+-+.|. +++|-++..-|
T Consensus 111 ~ifclKe~N-----~kKinSHrWfFnaf~~~----l~P~vcvllDvGT~P~-~~siy~Lwkaf 163 (163)
T PF01644_consen 111 IIFCLKEKN-----AKKINSHRWFFNAFCRQ----LQPNVCVLLDVGTKPG-KDSIYHLWKAF 163 (163)
T ss_pred EEEEecccc-----ccccchhhHHHHHHHhh----cCCcEEEEEecCCCcC-chHHHHHHhhC
Confidence 445556654 44533 33444444 7899999999999997 99998876543
No 91
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase. Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane
Probab=70.62 E-value=39 Score=38.15 Aligned_cols=48 Identities=15% Similarity=0.131 Sum_probs=37.7
Q ss_pred cEEEEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHH
Q 008144 250 LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQA 305 (576)
Q Consensus 250 ~l~yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~ 305 (576)
++.+++... ....++.+|+.|++.. ...++++++|.|+..+ +++|.+.
T Consensus 315 ~i~~i~~~~----~~fsr~~~Ld~g~~~~---~~d~L~f~~Dvd~~f~-~~fL~rc 362 (499)
T PF05679_consen 315 RIKWISVKT----GEFSRGAALDVGAKKF---PPDSLLFFCDVDMVFT-SDFLNRC 362 (499)
T ss_pred ceEEEEecC----CCccHHHHHHhhcccC---CCCcEEEEEeCCcccC-HHHHHHH
Confidence 466776641 1356999999999863 4567999999999998 9999875
No 92
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases. The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=62.83 E-value=5.8 Score=33.26 Aligned_cols=22 Identities=18% Similarity=-0.117 Sum_probs=15.5
Q ss_pred cccHHHHHHHHhcCCeEEEeCC
Q 008144 442 SEDLFTGFILHCKGWTSTYLTP 463 (576)
Q Consensus 442 tED~~t~~rl~~~Gwrs~y~~~ 463 (576)
-||.++..|+...|.++...+.
T Consensus 46 ~ED~Dl~~Rl~~~g~~~~~~~~ 67 (78)
T PF02709_consen 46 GEDDDLYNRLWKAGLKIVRVPG 67 (78)
T ss_dssp SHHHHHHHHHHHTT---B-SST
T ss_pred ccHHHHHHHHHHcCCeEEecCC
Confidence 3999999999999998877554
No 93
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=58.25 E-value=13 Score=39.35 Aligned_cols=36 Identities=22% Similarity=0.260 Sum_probs=28.4
Q ss_pred HHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc
Q 008144 270 ALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (576)
Q Consensus 270 ALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~ 310 (576)
-.|.|+.. +..++++++|+|++|. +++-..+..+..
T Consensus 118 LRNvAr~~----a~T~~v~~~DvD~~ps-~~l~~~l~~~~~ 153 (317)
T PF13896_consen 118 LRNVARSG----ARTDYVFLLDVDFLPS-PGLYEKLLRFAR 153 (317)
T ss_pred HHHHHHHh----cCcceEEEecceeeeC-cchHHHHHHHhh
Confidence 34777777 8999999999999997 787766655543
No 94
>PF11316 Rhamno_transf: Putative rhamnosyl transferase ; InterPro: IPR021466 This bacterial family of proteins has no known function.
Probab=57.22 E-value=1.2e+02 Score=30.75 Aligned_cols=55 Identities=15% Similarity=0.031 Sum_probs=35.4
Q ss_pred CCcEEEEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEE--eCCCCCCCchHHHHHHHHHhc
Q 008144 248 MPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILG--LDCDMYCNDPTSARQAMCFHL 310 (576)
Q Consensus 248 ~P~l~yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~--lDAD~~~~~pd~L~~~v~~f~ 310 (576)
+|+++.+.++. +....++..+++.... ..+++++. +|.|--++ .|+++++-.+..
T Consensus 84 ~p~~~i~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~~~RLDdDDAl~-~dFV~rlr~~a~ 140 (234)
T PF11316_consen 84 YPQFRIVFRPP------GPHRDAMRRAINAARR-DGADPVLQFRLDDDDALH-RDFVARLRRAAA 140 (234)
T ss_pred CCCcEEEecCC------chHHHHHHHHHhhhcc-CCCCEEEEEEECCcchhh-HHHHHHHHHHHH
Confidence 45556665542 3356777777744211 34555555 59999998 999998877764
No 95
>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU. The N-terminal domain of N-Acetylglucosamine-1-phosphate uridyltransferase (GlmU). GlmU is an essential bacterial enzyme with both an acetyltransferase and an uridyltransferase activity which have been mapped to the C-terminal and N-terminal domains, respectively. This family represents the N-terminal uridyltransferase. GlmU performs the last two steps in the synthesis of UDP-N-acetylglucosamine (UDP-GlcNAc), which is an essential precursor in both the peptidoglycan and the lipopolysaccharide metabolic pathways in Gram-positive and Gram-negative bacteria, respectively.
Probab=56.74 E-value=1.1e+02 Score=29.72 Aligned_cols=44 Identities=16% Similarity=0.077 Sum_probs=33.9
Q ss_pred CChHHHHHHHHHHcCCCCCCCEEEEeCCCC-CCCchHHHHHHHHHhcC
Q 008144 265 HFKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFHLD 311 (576)
Q Consensus 265 ~~KAgALN~aL~~~~~~s~ge~Il~lDAD~-~~~~pd~L~~~v~~f~D 311 (576)
.|.++++-.++.... .+.+.++++++|+ +.. ++.+.+++..+.+
T Consensus 73 ~g~~~ai~~a~~~~~--~~~~~vli~~~D~p~~~-~~~i~~l~~~~~~ 117 (229)
T cd02540 73 LGTGHAVKQALPALK--DFEGDVLVLYGDVPLIT-PETLQRLLEAHRE 117 (229)
T ss_pred CCCHHHHHHHHHhhc--cCCCeEEEEeCCccccC-HHHHHHHHHHHHh
Confidence 578999999998732 1268899999999 455 7888888877754
No 96
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []. It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.
Probab=54.03 E-value=26 Score=35.78 Aligned_cols=30 Identities=27% Similarity=0.343 Sum_probs=23.1
Q ss_pred CCCCEEEEeCCCCCCCchHHHHHHHHHhcCCC
Q 008144 282 SNSPYILGLDCDMYCNDPTSARQAMCFHLDPK 313 (576)
Q Consensus 282 s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~ 313 (576)
.+.+.++.+|-|+++. .+-|++.+.-| ||.
T Consensus 85 ~~~~Wf~~~DDDtyv~-~~~L~~~L~~~-~~~ 114 (252)
T PF02434_consen 85 SDKDWFCFADDDTYVN-VENLRRLLSKY-DPS 114 (252)
T ss_dssp HT-SEEEEEETTEEE--HHHHHHHHTTS--TT
T ss_pred CCceEEEEEeCCceec-HHHHHHHHhhC-CCc
Confidence 4679999999999997 99998888766 444
No 97
>TIGR03584 PseF pseudaminic acid CMP-transferase. The sequences in this family include the pfam02348 (cytidyltransferase) domain and are homologous to the NeuA protein responsible for the transfer of CMP to neuraminic acid. According to, this gene is responsible for the transfer of CMP to the structurally related sugar, pseudaminic acid which is observed as a component of sugar modifications of flagellin in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci.
Probab=52.42 E-value=1.9e+02 Score=28.82 Aligned_cols=59 Identities=7% Similarity=-0.031 Sum_probs=40.5
Q ss_pred CChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCcceEEEcc
Q 008144 265 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQF 323 (576)
Q Consensus 265 ~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~ 323 (576)
.+...++.+++.......+.++|+++++|+=.-+++.+.+++..|.+.+....+.++..
T Consensus 76 ~~~~~si~~~l~~l~~~~~~d~v~~l~~tsPl~~~~~I~~~i~~~~~~~~ds~~sv~~~ 134 (222)
T TIGR03584 76 TGTAPVVKHAIEELKLQKQYDHACCIYATAPFLQAKILKEAFELLKQPNAHFVFSVTSF 134 (222)
T ss_pred CCchHHHHHHHHHHhhcCCCCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEeecc
Confidence 45667777777653111246899999999988889999999988875333333455543
No 98
>PLN03153 hypothetical protein; Provisional
Probab=45.51 E-value=66 Score=36.51 Aligned_cols=30 Identities=17% Similarity=0.162 Sum_probs=25.0
Q ss_pred CCCCEEEEeCCCCCCCchHHHHHHHHHhcCCC
Q 008144 282 SNSPYILGLDCDMYCNDPTSARQAMCFHLDPK 313 (576)
Q Consensus 282 s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~ 313 (576)
.+.+.++++|.|+++. ++-|.+.+..+ |++
T Consensus 209 pd~kWfVf~DDDTyf~-~~NLv~~Ls~Y-Dpt 238 (537)
T PLN03153 209 PDVRWFVLGDDDTIFN-ADNLVAVLSKY-DPS 238 (537)
T ss_pred CCCCEEEEecCCcccc-HHHHHHHHhhc-CCC
Confidence 6789999999999998 88887777665 665
No 99
>PF06306 CgtA: Beta-1,4-N-acetylgalactosaminyltransferase (CgtA); InterPro: IPR010446 This family consists of several beta-1,4-N-acetylgalactosaminyltransferase proteins from Campylobacter jejuni [].
Probab=40.50 E-value=73 Score=33.98 Aligned_cols=34 Identities=15% Similarity=0.225 Sum_probs=25.6
Q ss_pred CChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHH
Q 008144 265 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSA 302 (576)
Q Consensus 265 ~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L 302 (576)
+.+..=-|..+.. ++..++++-+|||++-. ++-|
T Consensus 160 n~l~~YYNy~ls~---ipk~~w~iKID~DhIy~-~~KL 193 (347)
T PF06306_consen 160 NSLYNYYNYVLSF---IPKNEWAIKIDADHIYD-TKKL 193 (347)
T ss_pred hhhhhhhhhhhcc---cccceEEEEeccceeec-HHHH
Confidence 4466666777665 25789999999999996 7665
No 100
>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]
Probab=37.38 E-value=26 Score=43.65 Aligned_cols=71 Identities=23% Similarity=0.284 Sum_probs=45.0
Q ss_pred CccccHHHHHHHHhcCCeEEEeCCCCCeeEeecCC-CHHHHHHHHHHhhhhhHHHHhhhcCCcccCCCCCCHHHHHH
Q 008144 440 SVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTT-NLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMC 515 (576)
Q Consensus 440 sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~-tl~~~l~Qr~RWa~G~~qv~~~~~~p~~~~~~~l~~~qrl~ 515 (576)
.++||+..|+.-..||-++.+|+ -...|-.-+ .+..-..=-..-+.|+-|..+++.-=.+ +.++.+..-+.
T Consensus 1173 nlsEDIfAG~n~tlRgG~itH~E---YiQvGKGRDvGlnqI~~FeaKia~G~GEQ~LSRd~YrL--G~~ldffRmLS 1244 (1679)
T KOG0916|consen 1173 NLSEDIFAGFNATLRGGNITHHE---YIQVGKGRDVGLNQISNFEAKIANGNGEQTLSRDYYRL--GTQLDFFRMLS 1244 (1679)
T ss_pred ccchHhhhhhhHHhhCCCcccce---eeecccccccCcchhhhhhhhhcCCCcchhhhHHHHHh--cccccHHHHHH
Confidence 68999999999999999998886 233443322 3333333345667888888777631111 23566665554
No 101
>KOG3916 consensus UDP-Gal:glucosylceramide beta-1,4-galactosyltransferase [Carbohydrate transport and metabolism]
Probab=36.54 E-value=2e+02 Score=30.99 Aligned_cols=34 Identities=18% Similarity=-0.013 Sum_probs=27.1
Q ss_pred CChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCc
Q 008144 265 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCND 298 (576)
Q Consensus 265 ~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~ 298 (576)
-.+|.=||.|...+-....-|-+++-|.|.+|.|
T Consensus 197 FNRakL~NVGf~eAlkd~~wdCfIFHDVDllPen 230 (372)
T KOG3916|consen 197 FNRAKLLNVGFLEALKDYGWDCFIFHDVDLLPEN 230 (372)
T ss_pred ccHHHhhhhHHHHHHHhcCCCEEEEecccccccC
Confidence 4588899998887543346689999999999984
No 102
>TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family. Members of this protein family are probable accessory proteins for the biosynthesis of enzymes related to xanthine dehydrogenase. Comparative genomics suggests a role in the maturation of selenium-dependent molybdenum hydroxylases, although a tenuous alternative hypothesis is a role for this protein (with a requirement for SelD, the selenium donor protein in the selenocysteine and selenouridine biosynthesis pathways) metabolizing a selenium-containing substrate such as selenate.
Probab=34.81 E-value=1e+02 Score=28.87 Aligned_cols=42 Identities=14% Similarity=0.053 Sum_probs=32.0
Q ss_pred CChHHHHHHHHHHcCCCCCCCEEEEeCCCC-CCCchHHHHHHHHHhc
Q 008144 265 HFKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFHL 310 (576)
Q Consensus 265 ~~KAgALN~aL~~~~~~s~ge~Il~lDAD~-~~~~pd~L~~~v~~f~ 310 (576)
.|-++++..|++. ..+.+.+++++||+ .+. ++.+++++..+.
T Consensus 74 ~g~~~si~~~l~~---~~~~~~vlv~~~D~P~i~-~~~i~~l~~~~~ 116 (188)
T TIGR03310 74 EGQSSSIKLGLEL---PVQSDGYLFLLGDQPFVT-PDIIQLLLEAFA 116 (188)
T ss_pred cCHHHHHHHHhcC---CCCCCEEEEEeCCcCCCC-HHHHHHHHHHHH
Confidence 4567778888872 14678999999999 454 899999887665
No 103
>cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=34.54 E-value=1.2e+02 Score=28.07 Aligned_cols=43 Identities=14% Similarity=0.033 Sum_probs=34.2
Q ss_pred CChHHHHHHHHHHcCCCCCCCEEEEeCCCC-CCCchHHHHHHHHHhc
Q 008144 265 HFKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFHL 310 (576)
Q Consensus 265 ~~KAgALN~aL~~~~~~s~ge~Il~lDAD~-~~~~pd~L~~~v~~f~ 310 (576)
.|-+.++..|++... .+.+.++++.||+ .++ ++.+++++..+.
T Consensus 74 ~G~~~~i~~al~~~~--~~~~~vlv~~~D~P~i~-~~~i~~l~~~~~ 117 (186)
T cd04182 74 EGMSSSLAAGLEALP--ADADAVLILLADQPLVT-AETLRALIDAFR 117 (186)
T ss_pred hCHHHHHHHHHHhcc--ccCCEEEEEeCCCCCCC-HHHHHHHHHHHH
Confidence 578888999998832 1378999999999 555 899988887765
No 104
>PRK00317 mobA molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed
Probab=32.37 E-value=96 Score=29.63 Aligned_cols=43 Identities=12% Similarity=0.067 Sum_probs=33.7
Q ss_pred CChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcC
Q 008144 265 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 311 (576)
Q Consensus 265 ~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~D 311 (576)
.|-.+++..+++. .+.+.+++++||+-.-+++.+++++..+.+
T Consensus 74 ~g~~~~i~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 116 (193)
T PRK00317 74 PGPLAGILAGLKQ----ARTEWVLVVPCDTPFIPPDLVARLAQAAGK 116 (193)
T ss_pred CCCHHHHHHHHHh----cCCCeEEEEcCCcCCCCHHHHHHHHHhhhc
Confidence 3556788888887 678999999999944349999998887653
No 105
>PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional
Probab=32.06 E-value=1.2e+02 Score=33.13 Aligned_cols=40 Identities=13% Similarity=0.006 Sum_probs=30.3
Q ss_pred hHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc
Q 008144 267 KAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (576)
Q Consensus 267 KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~ 310 (576)
....+-+|++. .+.+++++.|||+-.-+++.+++++..+.
T Consensus 83 r~~SV~~gL~~----l~~d~VLVhdadrPfv~~e~I~~li~~~~ 122 (378)
T PRK09382 83 RQESVRNALEA----LDSEYVLIHDAARPFVPKELIDRLIEALD 122 (378)
T ss_pred HHHHHHHHHHh----cCCCeEEEeeccccCCCHHHHHHHHHHhh
Confidence 56778888887 44599999999974445899988877554
No 106
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane
Probab=30.83 E-value=64 Score=31.16 Aligned_cols=40 Identities=23% Similarity=0.342 Sum_probs=28.0
Q ss_pred ChH-HHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHh
Q 008144 266 FKA-GALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (576)
Q Consensus 266 ~KA-gALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f 309 (576)
.|. .+++-+.... .+.+|++.+|-|++++ ++.|...+.-.
T Consensus 65 ~K~~~~~~w~~~~c---~~~~~v~k~DDD~~vn-~~~l~~~L~~~ 105 (195)
T PF01762_consen 65 LKTLAGLKWASKHC---PNAKYVLKVDDDVFVN-PDRLVSFLKSL 105 (195)
T ss_pred HHHHHHHHHHHhhC---CchhheeecCcEEEEe-hHHhhhhhhhc
Confidence 344 3455555552 4589999999999997 88777665544
No 107
>TIGR02665 molyb_mobA molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial. In many molybdopterin-containing enzymes, including nitrate reductase and dimethylsulfoxide reductase, the cofactor is molybdopterin-guanine dinucleotide. The family described here contains MobA, molybdopterin-guanine dinucleotide biosynthesis protein A, from the Proteobacteria only. MobA can reconstitute molybdopterin-guanine dinucleotide biosynthesis without the product of the neighboring gene MobB. The probable MobA proteins of other lineages differ sufficiently that they are not included in scope of this family.
Probab=29.77 E-value=1.1e+02 Score=28.85 Aligned_cols=42 Identities=12% Similarity=0.129 Sum_probs=34.4
Q ss_pred CChHHHHHHHHHHcCCCCCCCEEEEeCCCC-CCCchHHHHHHHHHhcC
Q 008144 265 HFKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFHLD 311 (576)
Q Consensus 265 ~~KAgALN~aL~~~~~~s~ge~Il~lDAD~-~~~~pd~L~~~v~~f~D 311 (576)
.|-.+++-.|+.. .+.+.+++++||+ .++ ++.+++++..+.+
T Consensus 73 ~g~~~si~~al~~----~~~~~vlv~~~D~P~i~-~~~i~~l~~~~~~ 115 (186)
T TIGR02665 73 PGPLAGILAGLRW----AGTDWVLTVPCDTPFLP-EDLVARLAAALEA 115 (186)
T ss_pred CCCHHHHHHHHHh----cCCCeEEEEecCCCcCC-HHHHHHHHHHhhc
Confidence 5778888889987 5678999999999 565 9999998887753
No 108
>PF03213 Pox_P35: Poxvirus P35 protein; InterPro: IPR004900 The Poxvirus P35 protein is an immunodominant envelope protein. It binds to heparan sulphate on the cell surface to provide virion attachment to target cell [].; GO: 0019031 viral envelope
Probab=29.39 E-value=1.6e+02 Score=31.28 Aligned_cols=46 Identities=20% Similarity=0.286 Sum_probs=38.7
Q ss_pred CCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCcceEEEcccceeccCC
Q 008144 282 SNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNIN 331 (576)
Q Consensus 282 s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~ 331 (576)
.+.+||++++-|+.+.++..+..++.-+.+.+ +-++|-...++|..
T Consensus 117 ~~~~yivVvEddnT~~~~~~l~~~I~aM~~k~----idilQLre~~~~~~ 162 (325)
T PF03213_consen 117 PEDKYIVVVEDDNTLRDITTLHPIIKAMKKKN----IDILQLRETYHNSN 162 (325)
T ss_pred CCCCeEEEEeCCCcccccHHHHHHHHHHHHcC----ceEEEEehhhhccc
Confidence 56789999999999998899988888887666 78999988888653
No 109
>PF04724 Glyco_transf_17: Glycosyltransferase family 17; InterPro: IPR006813 This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (2.4.1.144 from EC). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression [, ].; GO: 0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0016020 membrane
Probab=25.59 E-value=1.4e+02 Score=32.40 Aligned_cols=36 Identities=33% Similarity=0.443 Sum_probs=26.2
Q ss_pred HHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHH
Q 008144 268 AGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQA 305 (576)
Q Consensus 268 AgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~ 305 (576)
-.+|+..++..+ +..+|+|++-|.|.+|+ |++|+.+
T Consensus 164 R~~l~~l~~~~~-~~~dDliivSDvDEIP~-p~~l~~L 199 (356)
T PF04724_consen 164 RNALNGLLRLAG-IQDDDLIIVSDVDEIPS-PETLKFL 199 (356)
T ss_pred HHHHHHHhhhcC-CCCCCEEEEcCcccccC-HHHHHHH
Confidence 345555555433 46889999999999997 9888544
No 110
>KOG1413 consensus N-acetylglucosaminyltransferase I [Carbohydrate transport and metabolism]
Probab=24.82 E-value=1.1e+02 Score=33.18 Aligned_cols=49 Identities=18% Similarity=0.239 Sum_probs=40.4
Q ss_pred CCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCC-CceEEEEEcCCCCccchH
Q 008144 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPV-DKLHVYLSDDGGSPITLH 146 (576)
Q Consensus 93 ~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~-~kl~V~V~DDg~~~~T~~ 146 (576)
..|.+-|+|=+|| - ++.+++++..++.+. |. +++-++|+-||+...+-.
T Consensus 65 ~~~v~pvvVf~cs---R-~~~lr~~v~kll~yr-PsaekfpiiVSQD~~~e~vk~ 114 (411)
T KOG1413|consen 65 WPPVIPVVVFACS---R-ADALRRHVKKLLEYR-PSAEKFPIIVSQDCEKEAVKK 114 (411)
T ss_pred CCCceeEEEEecC---c-HHHHHHHHHHHHHhC-cchhhcCEEEeccCCcHHHHH
Confidence 3467788888997 3 378999999999999 76 699999999999975533
No 111
>cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.
Probab=24.66 E-value=2.4e+02 Score=26.31 Aligned_cols=42 Identities=19% Similarity=0.247 Sum_probs=34.5
Q ss_pred CCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHh
Q 008144 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (576)
Q Consensus 264 ~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f 309 (576)
..|-.+++..|++. .+.+.+++++||+-.-+++.+++++..+
T Consensus 68 ~~G~~~si~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 109 (181)
T cd02503 68 GKGPLAGILAALRA----APADWVLVLACDMPFLPPELLERLLAAA 109 (181)
T ss_pred CCCCHHHHHHHHHh----cCCCeEEEEeCCcCCCCHHHHHHHHHhh
Confidence 35778899999998 5689999999999543499999888766
No 112
>PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional
Probab=24.34 E-value=3.5e+02 Score=26.15 Aligned_cols=42 Identities=14% Similarity=0.007 Sum_probs=33.9
Q ss_pred CChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc
Q 008144 265 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (576)
Q Consensus 265 ~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~ 310 (576)
.|-.+++-.|+.. .+.+.+++++||+-.-+++.+++++....
T Consensus 78 ~G~~~si~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 119 (200)
T PRK02726 78 QGPLVAFAQGLPQ----IKTEWVLLLACDLPRLTVDVLQEWLQQLE 119 (200)
T ss_pred CChHHHHHHHHHh----CCCCcEEEEeCCCCCCCHHHHHHHHHHhh
Confidence 5666788888887 56789999999997766899988887664
No 113
>COG4097 Predicted ferric reductase [Inorganic ion transport and metabolism]
Probab=23.17 E-value=2.1e+02 Score=31.36 Aligned_cols=66 Identities=12% Similarity=0.184 Sum_probs=41.6
Q ss_pred CCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCC
Q 008144 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTIC 171 (576)
Q Consensus 92 ~~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~ 171 (576)
+.-|+|+.+-|+.| +++..-.+-++++.. .-|+ +.+.++|.+.++---.... .|++-++|.
T Consensus 341 ~s~~~V~L~Y~~~n---~e~~~y~~eLr~~~q-kl~~--~~lHiiDSs~~g~l~~e~l-------------er~~~~~~~ 401 (438)
T COG4097 341 KSDPPVHLFYCSRN---WEEALYAEELRALAQ-KLPN--VVLHIIDSSKDGYLDQEDL-------------ERYPDRPRT 401 (438)
T ss_pred ccCCceEEEEEecC---CchhHHHHHHHHHHh-cCCC--eEEEEecCCCCCccCHHHh-------------hccccccCc
Confidence 35689999999999 554566677777554 4466 6777766655553221111 244556677
Q ss_pred ccccc
Q 008144 172 PQAYF 176 (576)
Q Consensus 172 p~~yf 176 (576)
|..||
T Consensus 402 ~sv~f 406 (438)
T COG4097 402 RSVFF 406 (438)
T ss_pred ceEEE
Confidence 77777
No 114
>TIGR01173 glmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. This protein is a bifunctional enzyme, GlmU, which catalyzes last two reactions in the four-step pathway of UDP-N-acetylglucosamine biosynthesis from fructose-6-phosphate. Its reaction product is required from peptidoglycan biosynthesis, LPS biosynthesis in species with LPS, and certain other processes.
Probab=22.49 E-value=5.7e+02 Score=27.68 Aligned_cols=44 Identities=14% Similarity=0.018 Sum_probs=33.3
Q ss_pred CChHHHHHHHHHHcCCCCCCCEEEEeCCCC-CCCchHHHHHHHHHhcCC
Q 008144 265 HFKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFHLDP 312 (576)
Q Consensus 265 ~~KAgALN~aL~~~~~~s~ge~Il~lDAD~-~~~~pd~L~~~v~~f~Dp 312 (576)
.+-++++..++... .+.+.++++++|+ +.. ++.+++++..+.+.
T Consensus 75 ~G~~~ai~~a~~~l---~~~~~~lv~~~D~p~i~-~~~~~~l~~~~~~~ 119 (451)
T TIGR01173 75 LGTGHAVLQALPFL---PDDGDVLVLYGDVPLIS-AETLERLLEAHRQN 119 (451)
T ss_pred CchHHHHHHHHHhc---CCCCcEEEEECCcCCcC-HHHHHHHHHHHhhC
Confidence 46788888888873 2347899999999 565 88898888777543
No 115
>KOG4179 consensus Lysyl hydrolase/glycosyltransferase family 25 [Posttranslational modification, protein turnover, chaperones]
Probab=21.99 E-value=4e+02 Score=29.64 Aligned_cols=36 Identities=28% Similarity=0.091 Sum_probs=27.9
Q ss_pred hHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHH
Q 008144 267 KAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMC 307 (576)
Q Consensus 267 KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~ 307 (576)
|-.|+|.|=.- -++||++.|+|.++.++|.|.-+|.
T Consensus 98 Keea~~~~r~~-----~adyilf~d~d~lLts~dTl~llm~ 133 (568)
T KOG4179|consen 98 KEEALNWARSG-----WADYILFKDEDNLLTSGDTLPLLMN 133 (568)
T ss_pred HHHHHHHHHhh-----hcceeEEeehhheeeCCchHhHHHh
Confidence 56677776332 4699999999999998999876654
Done!