Query 008144
Match_columns 576
No_of_seqs 282 out of 1968
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 19:10:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008144.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008144hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg6_A Cellulose synthase subu 100.0 3.5E-48 1.2E-52 448.4 42.8 386 19-566 64-459 (802)
2 3bcv_A Putative glycosyltransf 99.8 1.2E-20 4.1E-25 184.3 13.5 110 93-312 3-112 (240)
3 1xhb_A Polypeptide N-acetylgal 99.8 6.7E-20 2.3E-24 198.7 19.6 238 92-502 26-301 (472)
4 2z86_A Chondroitin synthase; G 99.8 1.4E-19 4.6E-24 202.8 18.3 212 93-479 91-338 (625)
5 1qg8_A Protein (spore coat pol 99.8 4.3E-20 1.5E-24 182.2 12.1 219 95-488 1-234 (255)
6 2ffu_A Ppgalnact-2, polypeptid 99.8 8.2E-19 2.8E-23 192.0 16.5 113 91-312 62-174 (501)
7 2d7i_A Polypeptide N-acetylgal 99.8 1.8E-18 6.2E-23 192.8 18.5 237 92-501 109-378 (570)
8 2z86_A Chondroitin synthase; G 99.8 2.5E-18 8.7E-23 192.5 15.1 220 93-495 373-599 (625)
9 3ckj_A Putative uncharacterize 99.7 1.5E-16 5.2E-21 165.1 14.1 121 93-324 46-169 (329)
10 4fix_A UDP-galactofuranosyl tr 99.6 1.6E-15 5.3E-20 171.9 14.8 119 93-314 178-299 (657)
11 3l7i_A Teichoic acid biosynthe 99.6 4.1E-17 1.4E-21 186.6 0.0 195 95-463 2-199 (729)
12 3f1y_A Mannosyl-3-phosphoglyce 99.6 1E-13 3.5E-18 147.7 19.4 116 93-314 92-211 (387)
13 2fy7_A Beta-1,4-galactosyltran 99.5 2.5E-14 8.7E-19 146.6 10.0 136 266-495 112-264 (287)
14 2nxv_A ATP synthase subunits r 99.2 1.1E-10 3.7E-15 116.3 13.8 40 267-311 62-101 (249)
15 2bo4_A Mannosylglycerate synth 99.0 8.4E-09 2.9E-13 110.2 18.1 42 264-310 73-119 (397)
16 2zu9_A Mannosyl-3-phosphoglyce 98.3 3E-06 1E-10 90.0 13.3 38 265-308 143-183 (394)
17 2wvl_A Mannosyl-3-phosphoglyce 98.3 4.1E-06 1.4E-10 87.3 13.2 44 93-145 51-94 (391)
18 1fo8_A Alpha-1,3-mannosyl-glyc 98.0 1.8E-05 6.3E-10 82.8 9.9 46 94-144 1-46 (343)
19 3lw6_A FI08434P, beta-4-galact 82.9 9 0.00031 38.6 11.4 33 264-298 96-128 (287)
20 3oam_A 3-deoxy-manno-octuloson 47.5 1.1E+02 0.0037 29.3 10.5 44 265-311 74-118 (252)
21 3tqd_A 3-deoxy-manno-octuloson 47.2 1.3E+02 0.0045 29.1 11.1 47 265-313 81-128 (256)
22 2j0a_A Beta-1,3-N-acetylglucos 46.4 23 0.00079 35.2 5.5 30 282-313 92-121 (280)
23 3d5n_A Q97W15_sulso; NESG, SSR 40.3 63 0.0021 29.6 7.2 41 265-309 71-112 (197)
24 2c0n_A A197; thermophil protei 32.5 33 0.0011 32.8 3.7 25 282-307 52-79 (203)
25 2xwl_A 2-C-methyl-D-erythritol 26.9 1.1E+02 0.0039 27.9 6.6 40 266-309 78-118 (223)
26 1e5k_A Molybdopterin-guanine d 24.1 89 0.003 28.8 5.2 39 265-308 77-116 (201)
27 2y6p_A 3-deoxy-manno-octuloson 22.2 99 0.0034 28.6 5.2 40 265-310 72-112 (234)
No 1
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=100.00 E-value=3.5e-48 Score=448.35 Aligned_cols=386 Identities=22% Similarity=0.340 Sum_probs=314.6
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHhhcccCC-CchhHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCc
Q 008144 19 INRL-HALLHCIAIGFLIYYRASYLLQET-RAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPA 96 (576)
Q Consensus 19 ~~r~-~~~~~~~~~~~yl~~R~~~~~~~~-~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~~~~~P~ 96 (576)
+.|+ ++++.+++.+.|++||++.+++.. .+...++|++++++|++..+.|+++.+..++|..|...++. .+++.|+
T Consensus 64 ~~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~~~~~~~~r~~~~~~--~~~~~P~ 141 (802)
T 4hg6_A 64 VPRFLLLSAASMLVMRYWFWRLFETLPPPALDASFLFALLLFAVETFSISIFFLNGFLSADPTDRPFPRPL--QPEELPT 141 (802)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCCCC--CTTTCCC
T ss_pred chHHHHHHHHHHHHHHHHHHHhheecCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCC--CccCCCc
Confidence 3454 444444456899999999999854 35677888888999999999999999999999988766543 2467899
Q ss_pred eEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCccccc
Q 008144 97 IDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYF 176 (576)
Q Consensus 97 VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf 176 (576)
|+|+||||| |+++++.+||.|+++++||.++++|+|+|||++|.|.+.
T Consensus 142 VSViIPtyN---e~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~----------------------------- 189 (802)
T 4hg6_A 142 VDILVPSYN---EPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMS----------------------------- 189 (802)
T ss_dssp EEEEEECTT---CCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTC-----------------------------
T ss_pred EEEEEEECC---CCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCcccccc-----------------------------
Confidence 999999999 887788999999999999999999999999999988531
Q ss_pred ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEEEec
Q 008144 177 SEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSR 256 (576)
Q Consensus 177 ~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv~R 256 (576)
.+++.+++.++..+..+++..+ .++.|+.|
T Consensus 190 ---------~d~~i~~~~~~~~~~l~~~~~~-----------------------------------------~~v~~i~~ 219 (802)
T 4hg6_A 190 ---------PDPELAQKAQERRRELQQLCRE-----------------------------------------LGVVYSTR 219 (802)
T ss_dssp ---------SSHHHHHHHHHHHHHHHHHHHH-----------------------------------------HTCEEEEC
T ss_pred ---------CCHHHHHHHHhhhHHHHHHHHh-----------------------------------------cCcEEEEe
Confidence 1122222211111111111100 13678888
Q ss_pred cCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc-CCCCCcceEEEcccceeccCCcc--
Q 008144 257 EKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNINKY-- 333 (576)
Q Consensus 257 ekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~-Dp~~g~~vg~VQ~pq~f~n~~~~-- 333 (576)
++ +++||++|+|.|++. +++|||+++|||++++ ||+|++++..|. ||+ +++||+++.+.|.+..
T Consensus 220 ~~----~~~GKa~alN~gl~~----a~gd~Il~lDaD~~~~-pd~L~~lv~~~~~dp~----v~~V~~~~~~~~~~~~~~ 286 (802)
T 4hg6_A 220 ER----NEHAKAGNMSAALER----LKGELVVVFDADHVPS-RDFLARTVGYFVEDPD----LFLVQTPHFFINPDPIQR 286 (802)
T ss_dssp SS----CCSHHHHHHHHHHHH----CCCSEEEECCTTEEEC-TTHHHHHHHHHHHSSS----CCEEECCCCBSSCCHHHH
T ss_pred cC----CCCcchHHHHHHHHh----cCCCEEEEECCCCCcC-hHHHHHHHHHHhcCCC----eEEEeccEEEeCCchHhh
Confidence 76 457999999999999 8999999999999997 999999999995 887 7899999999875310
Q ss_pred -----ChHHHHHHHHHHHHHHHHhhcCCccccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCCCCC
Q 008144 334 -----DIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENF 408 (576)
Q Consensus 334 -----d~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~ 408 (576)
..+.+....++.....+.+.+++++++|+++++||++++++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~v---------------------------------- 332 (802)
T 4hg6_A 287 NLALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALDEA---------------------------------- 332 (802)
T ss_dssp HHTCCTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHHHH----------------------------------
T ss_pred hhhHHhhhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHHHHc----------------------------------
Confidence 11122345678888899999999999999999999999865
Q ss_pred chhHHHhhcccccccccccCcccccccccCCCccccHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHHHHHHHhhh
Q 008144 409 SNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGS 488 (576)
Q Consensus 409 ~~~~~~~a~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~RWa~ 488 (576)
+||++++++||.+++++++++||+++|++ ++.+++.+|+|++++++||.||++
T Consensus 333 -------------------------Ggf~~~~~~ED~~l~~rl~~~G~ri~~~~--~~~~~~~~p~t~~~~~~Qr~RW~~ 385 (802)
T 4hg6_A 333 -------------------------GGFAGETITEDAETALEIHSRGWKSLYID--RAMIAGLQPETFASFIQQRGRWAT 385 (802)
T ss_dssp -------------------------TTCCCSSSSHHHHHHHHHHTTTCCEEECC--CCCEEECCCCSHHHHHHHHHHHHH
T ss_pred -------------------------CCcCCCCcchHHHHHHHHHHcCCeEEEec--CCEEEecCCCCHHHHHHHHHHHHc
Confidence 58999999999999999999999999998 589999999999999999999999
Q ss_pred hhHHHHhhhcCCcccCCCCCCHHHHHHHHhHhHhhHHhHHHHHHHHHHHHHHHHcCCCcchhhHHHHHHhhhhHHHHH
Q 008144 489 GLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPERFVNTCKRSFPLEVQS 566 (576)
Q Consensus 489 G~~qv~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~~~~~~~~~~~~P~~~ll~g~~~~p~~~~~~~~~~~~~~~~~ 566 (576)
|.+|+++.+ +|++.+ ++++.||++|+...+++ +.+++.++++++|++++++|+.++......++.+.+|+.+.+
T Consensus 386 G~~q~l~~~-~pl~~~--~l~~~~rl~~l~~~~~~-~~~~~~li~ll~p~~~ll~~~~~~~~~~~~~~~~~lp~~l~~ 459 (802)
T 4hg6_A 386 GMMQMLLLK-NPLFRR--GLGIAQRLCYLNSMSFW-FFPLVRMMFLVAPLIYLFFGIEIFVATFEEVLAYMPGYLAVS 459 (802)
T ss_dssp HHHHHHHHS-CTTSCS--SCCHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHCCCCSCCCHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHh-CccccC--CCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHH
Confidence 999999854 677654 69999999999988888 888889999999999999999999888878888888887743
No 2
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.84 E-value=1.2e-20 Score=184.26 Aligned_cols=110 Identities=15% Similarity=0.107 Sum_probs=90.4
Q ss_pred CCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCc
Q 008144 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (576)
Q Consensus 93 ~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p 172 (576)
..|.|+|+||+|| ++ +.+.++|.|+++++||. ++|+|+||||+|.|.+.+.+.++
T Consensus 3 ~~p~vsViIp~yn---~~-~~l~~~l~Sl~~q~~~~--~eiIvvDd~S~d~t~~~~~~~~~------------------- 57 (240)
T 3bcv_A 3 LIPKVSVIVPIYN---VE-KYLDQCVQALLAQTLSD--IEIILIDDESPDNCPKICDDYAA------------------- 57 (240)
T ss_dssp CCCSEEEEEEESS---CT-TTHHHHHHHHHTCSSSS--EEEEEEECCCSSSHHHHHHHHHH-------------------
T ss_pred CCCcEEEEEecCC---CH-HHHHHHHHHHHhCcCCC--eEEEEEECCCCcCHHHHHHHHHh-------------------
Confidence 3589999999999 44 58999999999999995 99999999999988643322110
Q ss_pred ccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEE
Q 008144 173 QAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLV 252 (576)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~ 252 (576)
..|++.
T Consensus 58 --------------------------------------------------------------------------~~~~i~ 63 (240)
T 3bcv_A 58 --------------------------------------------------------------------------QYPNIK 63 (240)
T ss_dssp --------------------------------------------------------------------------HCSSEE
T ss_pred --------------------------------------------------------------------------hCCCEE
Confidence 124577
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCC
Q 008144 253 YVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDP 312 (576)
Q Consensus 253 yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp 312 (576)
++.. + +.|+++|+|.|++. ++|+||+++|+|.++. |++|.+++..+.++
T Consensus 64 ~i~~-~-----n~G~~~a~N~g~~~----a~g~~i~~lD~Dd~~~-~~~l~~l~~~~~~~ 112 (240)
T 3bcv_A 64 VIHK-K-----NAGLGMACNSGLDV----ATGEYVAFCDSDDYVD-SDMYMTMYNVAQKY 112 (240)
T ss_dssp EEEC-C-----CCCHHHHHHHHHHH----CCSSEEEECCTTCCCC-TTHHHHHHHHHHHH
T ss_pred EEEC-C-----CCChHHHHHHHHHH----cCCCEEEEECCCCcCC-HHHHHHHHHHHHhc
Confidence 7753 2 36899999999999 8999999999999997 99999999988753
No 3
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.83 E-value=6.7e-20 Score=198.71 Aligned_cols=238 Identities=15% Similarity=0.067 Sum_probs=159.4
Q ss_pred CCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCcc-chHhHHHHHHhhhhhhhHHHhhCCccC
Q 008144 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPI-TLHGMREACRFAKWWLPFCRRYGIKTI 170 (576)
Q Consensus 92 ~~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~-T~~~l~Ea~~fa~~w~pfc~~~~v~~r 170 (576)
+++|.|+|+||+|| |+.+.+.+||.|+++++||...++|+|+||||+|. |.+.+.+.+
T Consensus 26 ~~~p~vSVIIp~yN---~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~------------------ 84 (472)
T 1xhb_A 26 DNLPTTSVVIVFHN---EAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYV------------------ 84 (472)
T ss_dssp SCCCCEEEEEEESS---CCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHH------------------
T ss_pred cCCCCeEEEEEeCC---CCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHH------------------
Confidence 56899999999999 76569999999999999998678999999999984 654332210
Q ss_pred CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCC-
Q 008144 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMP- 249 (576)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P- 249 (576)
..+|
T Consensus 85 ---------------------------------------------------------------------------~~~~~ 89 (472)
T 1xhb_A 85 ---------------------------------------------------------------------------KKLKV 89 (472)
T ss_dssp ---------------------------------------------------------------------------HSSSS
T ss_pred ---------------------------------------------------------------------------HHCCC
Confidence 0124
Q ss_pred cEEEEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc-CCCCCcceEEEcccceec
Q 008144 250 LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFH 328 (576)
Q Consensus 250 ~l~yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~-Dp~~g~~vg~VQ~pq~f~ 328 (576)
++.++..++| .|+++|+|.|++. ++||+|+++|+|..++ |++|.+++..+. ++. ++++.. ....
T Consensus 90 ~v~vi~~~~n-----~G~~~a~N~g~~~----A~gd~i~flD~D~~~~-p~~L~~ll~~~~~~~~----~~v~~~-~~~~ 154 (472)
T 1xhb_A 90 PVHVIRMEQR-----SGLIRARLKGAAV----SRGQVITFLDAHCECT-AGWLEPLLARIKHDRR----TVVCPI-IDVI 154 (472)
T ss_dssp CEEEEECSSC-----CCHHHHHHHHHHH----CCSSEEEEEESSEEEC-TTCHHHHHHHHHHCTT----EEEEEE-EEEE
T ss_pred cEEEEECCCC-----CChHHHHHHHHHh----ccCCeEEEECCCeEeC-ccHHHHHHHHHHhCCC----EEEEee-eeeE
Confidence 5788876653 5799999999999 8999999999999997 999999999887 565 222211 1111
Q ss_pred cCCcc------C----hHHHHH-----HHHHHHHHHHH-h---hcCCccccccceEEEcccccccccchhhhhhhcChhH
Q 008144 329 NINKY------D----IYDGRF-----RSAYCVQWQGM-D---GLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNV 389 (576)
Q Consensus 329 n~~~~------d----~~~~~~-----~~f~~~~~~g~-d---~~~g~~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~ 389 (576)
+.+.. . .+.... ........... + ....+..+|++.++||+++..+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~i--------------- 219 (472)
T 1xhb_A 155 SDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEI--------------- 219 (472)
T ss_dssp CSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHT---------------
T ss_pred cCCCceeccCCCcccceeeccceeecccCCHHHHhcccCCCCCcccCccccceeEEEEHHHHHHc---------------
Confidence 10000 0 000000 00000000000 1 2223446677788999999865
Q ss_pred HHHhHHhhhhcccCCCCCCchhHHHhhcccccccccccCcccccccccCCCc---cccHHHHHHHHhcCCeEEEeCCCCC
Q 008144 390 LINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSV---SEDLFTGFILHCKGWTSTYLTPFRP 466 (576)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~~G~~~~si---tED~~t~~rl~~~Gwrs~y~~~~~~ 466 (576)
+||+++.. .||+++++|+...|+++.|++. +
T Consensus 220 --------------------------------------------Ggfde~~~~~g~ED~dl~~R~~~~G~~i~~~p~--~ 253 (472)
T 1xhb_A 220 --------------------------------------------GTYDAGMDIWGGENLEISFRIWQCGGTLEIVTC--S 253 (472)
T ss_dssp --------------------------------------------TSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEE--E
T ss_pred --------------------------------------------CCCCCcccccCchhHHHHHHHHhcCCeEEEccC--c
Confidence 46766543 6999999999999999999973 3
Q ss_pred eeEee----cCCC---------HHHHHHHHHHhhhhhHHHHhhhcCCcc
Q 008144 467 QFLGT----STTN---------LNDLLIQGTRWGSGLTDVGLSRFCPLL 502 (576)
Q Consensus 467 ~~~g~----aP~t---------l~~~l~Qr~RWa~G~~qv~~~~~~p~~ 502 (576)
.+.-. .|.+ .....+...||..+..+.++.+ .|..
T Consensus 254 ~v~H~~~~~~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~~~~-~p~~ 301 (472)
T 1xhb_A 254 HVGHVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYII-SPGV 301 (472)
T ss_dssp EEEEEC------------CHHHHHHHHHHHHHHCGGGGHHHHHT-STTG
T ss_pred EEEEEccCcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhh-Cccc
Confidence 33221 1221 3466777789999999888754 4543
No 4
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.82 E-value=1.4e-19 Score=202.78 Aligned_cols=212 Identities=17% Similarity=0.146 Sum_probs=148.1
Q ss_pred CCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCc
Q 008144 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (576)
Q Consensus 93 ~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p 172 (576)
..|.|+|+||||| |+ +.+.+||.|+++++||. .++|+|+|||++|.|.+.+.+ +.
T Consensus 91 ~~p~vsviIp~~n---~~-~~l~~~l~sl~~q~~~~-~~eiivvDd~s~d~t~~~~~~--------------~~------ 145 (625)
T 2z86_A 91 IIDGLSIVIPTYN---RA-KILAITLACLCNQKTIY-DYEVIVADDGSKENIEEIVRE--------------FE------ 145 (625)
T ss_dssp CCCCEEEEEEESS---CH-HHHHHHHHHHHTCCCSS-CEEEEEEEESCSSCHHHHHHT--------------TT------
T ss_pred cCCcEEEEEecCC---cH-HHHHHHHHHHHhhccCC-CeEEEEEeCCCchhHHHHHHH--------------hh------
Confidence 3589999999999 65 79999999999999885 699999999999977432211 00
Q ss_pred ccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEE
Q 008144 173 QAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLV 252 (576)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~ 252 (576)
..+++.
T Consensus 146 --------------------------------------------------------------------------~~~~i~ 151 (625)
T 2z86_A 146 --------------------------------------------------------------------------SLLNIK 151 (625)
T ss_dssp --------------------------------------------------------------------------TTSCEE
T ss_pred --------------------------------------------------------------------------hcCCeE
Confidence 012477
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc-CCCCCcceEEEcccceeccCC
Q 008144 253 YVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNIN 331 (576)
Q Consensus 253 yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~-Dp~~g~~vg~VQ~pq~f~n~~ 331 (576)
|+.+++ +.+||++|+|.|++. +++++|+++|+|+++. |++|.+++..|. +|. +++|+..+.+.+..
T Consensus 152 ~i~~~~----~~~g~~~a~N~g~~~----a~g~~v~~lD~D~~~~-~~~l~~~~~~~~~~~~----~~~~g~~~~~~~~~ 218 (625)
T 2z86_A 152 YVRQKD----YGYQLCAVRNLGLRA----AKYNYVAILDCDMAPN-PLWVQSYMELLAVDDN----VALIGPRKYIDTSK 218 (625)
T ss_dssp EEEECC----CSCCHHHHHHHHHHH----CCSSEEEEECTTEEEC-TTHHHHHHHHHHHCTT----EEEECCEEEECCTT
T ss_pred EEEeCC----CCcchhHHHHHHHHh----CCcCEEEEECCCCCCC-HHHHHHHHHHHhcCCc----eEEEEeeeeccCcc
Confidence 777653 235899999999999 8999999999999997 999999999987 676 66776655443321
Q ss_pred ccChHHHHH---------------HHHHH------------HHHHHHhh---cCC--ccccccceEEEcccccccccchh
Q 008144 332 KYDIYDGRF---------------RSAYC------------VQWQGMDG---LKG--PVLSGTGYYIKRESLYADFTHTE 379 (576)
Q Consensus 332 ~~d~~~~~~---------------~~f~~------------~~~~g~d~---~~g--~~~~Gtg~~~RR~AL~~i~~~~~ 379 (576)
..+.... ..+.. ......+. ... ..++|++.++||+++..+
T Consensus 219 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~i----- 291 (625)
T 2z86_A 219 --HTYLDFLSQKSLINEIPEIITNNQVAGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRA----- 291 (625)
T ss_dssp --CCHHHHHHSTTGGGTSCC---------------CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHH-----
T ss_pred --cchhhcccchHHhhhcchhccCCchhhhhccCCccccchhhhcccccccccCCceeEEeeceeeeEHHHHHHh-----
Confidence 0000000 00000 00000111 111 247888899999999865
Q ss_pred hhhhhcChhHHHHhHHhhhhcccCCCCCCchhHHHhhcccccccccccCcccccccccCCCc---cccHHHHHHHHhcCC
Q 008144 380 LKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSV---SEDLFTGFILHCKGW 456 (576)
Q Consensus 380 ~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~~G~~~~si---tED~~t~~rl~~~Gw 456 (576)
|||+.... .||.++++|++.+||
T Consensus 292 ------------------------------------------------------Ggfde~~~~~g~ED~dl~~Rl~~~G~ 317 (625)
T 2z86_A 292 ------------------------------------------------------GWFDEEFTHWGGEDNEFGYRLYREGC 317 (625)
T ss_dssp ------------------------------------------------------CCCCTTCSSCCCHHHHHHHHHHHTTC
T ss_pred ------------------------------------------------------CCCccccccCCcchhhhhhhHHhCCc
Confidence 46766644 599999999999999
Q ss_pred eEEEeCCCCCeeEeecCCCHHHH
Q 008144 457 TSTYLTPFRPQFLGTSTTNLNDL 479 (576)
Q Consensus 457 rs~y~~~~~~~~~g~aP~tl~~~ 479 (576)
++.|++ .+.++...|.+-...
T Consensus 318 ~i~~~p--~~~v~H~~~~~~~~~ 338 (625)
T 2z86_A 318 YFRSVE--GAMAYHQEPPGKENE 338 (625)
T ss_dssp EEEECG--GGCEEEECCC-----
T ss_pred eEEEcc--cchhhccCCccccch
Confidence 999998 477787777765443
No 5
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.82 E-value=4.3e-20 Score=182.23 Aligned_cols=219 Identities=13% Similarity=0.049 Sum_probs=139.3
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCccc
Q 008144 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (576)
Q Consensus 95 P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~ 174 (576)
|.|+|+||+|| ++ +.+.+||.|+++++||. ++|+|+||||+|.|.+.+.+.+
T Consensus 1 p~vSViIp~yn---~~-~~l~~~l~Sl~~q~~~~--~eiivvDd~S~d~t~~~~~~~~---------------------- 52 (255)
T 1qg8_A 1 PKVSVIMTSYN---KS-DYVAKSISSILSQTFSD--FELFIMDDNSNEETLNVIRPFL---------------------- 52 (255)
T ss_dssp CCEEEEEEESS---CT-TTHHHHHHHHHTCSCCC--EEEEEEECSCCHHHHHHHGGGG----------------------
T ss_pred CeEEEEEEcCC---CH-HHHHHHHHHHHhccCCc--eEEEEEECCCCchHHHHHHHHh----------------------
Confidence 78999999999 54 58999999999999995 9999999999997753221100
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEEE
Q 008144 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYV 254 (576)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv 254 (576)
..|++.|+
T Consensus 53 ------------------------------------------------------------------------~~~~i~~i 60 (255)
T 1qg8_A 53 ------------------------------------------------------------------------NDNRVRFY 60 (255)
T ss_dssp ------------------------------------------------------------------------GSTTEEEE
T ss_pred ------------------------------------------------------------------------hcCCEEEE
Confidence 01357888
Q ss_pred eccCCC---CCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc-CCCCCcceEEEcccceec--
Q 008144 255 SREKRP---EHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFH-- 328 (576)
Q Consensus 255 ~Rekrp---g~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~-Dp~~g~~vg~VQ~pq~f~-- 328 (576)
..+... ...+.|+++|+|.|++. ++|+||+++|+|.++. |++|.+++..+. +|+ +++|.+.....
T Consensus 61 ~~~~~~~~~~~~n~G~~~a~N~gi~~----a~g~~i~~lD~Dd~~~-~~~l~~~~~~~~~~~~----~~~v~~~~~~~~~ 131 (255)
T 1qg8_A 61 QSDISGVKERTEKTRYAALINQAIEM----AEGEYITYATDDNIYM-PDRLLKMVRELDTHPE----KAVIYSASKTYHL 131 (255)
T ss_dssp ECCCCSHHHHHSSCHHHHHHHHHHHH----CCCSEEEEEETTEEEC-TTHHHHHHHHHHHCTT----CCEEEEEEEEEEE
T ss_pred ecccccccccccccCHHHHHHHHHHH----cCCCEEEEeCCCCccC-hHHHHHHHHHHHhCCC----ceEEEeceEEEEe
Confidence 765100 00136899999999999 8999999999999997 999999999887 677 45555554433
Q ss_pred cCCccChHHHHHHHHHHHHHHHHhhcCCccccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCCCCC
Q 008144 329 NINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENF 408 (576)
Q Consensus 329 n~~~~d~~~~~~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~ 408 (576)
+... .......... ...........+|++.++||+++..++
T Consensus 132 ~~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~rr~~~~~~g--------------------------------- 172 (255)
T 1qg8_A 132 NENR-DIVKETVRPA-----AQVTWNAPCAIDHCSVMHRYSVLEKVK--------------------------------- 172 (255)
T ss_dssp C----CEEEEEEECC-----CSCBSCCTTTSCGGGEEEETHHHHHHH---------------------------------
T ss_pred CCCC-cchhhccCch-----HHHHHhhcCCCccceEEEEHHHHHhhc---------------------------------
Confidence 2211 1000000000 000112233467888999999997651
Q ss_pred chhHHHhhcccccccccccCcccccccc------c-CCCccccHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHH-
Q 008144 409 SNVLQEETGVLASCSYEHQTKWGEEVGI------L-YQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLL- 480 (576)
Q Consensus 409 ~~~~~~~a~~v~~c~ye~~t~wg~~~G~------~-~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l- 480 (576)
+|| . .....||.++.+++..+| ++.|++. ....+...+.++....
T Consensus 173 -------------------------~~f~~~~~~~~~~~~~eD~~~~~r~~~~g-~~~~~~~-~~~~~r~~~~s~s~~~~ 225 (255)
T 1qg8_A 173 -------------------------EKFGSYWDESPAFYRIGDARFFWRVNHFY-PFYPLDE-ELDLNYITDQSIHFQLF 225 (255)
T ss_dssp -------------------------HHHSSSSCCCGGGSTTHHHHHHHHHTTTC-CBEEEEE-EEEEEEEC---------
T ss_pred -------------------------ccccccccCCcccchHHHHHHHHHHHHhC-CEEEecC-cEEEEEEcCCccchhHH
Confidence 133 1 124579999999999987 6888874 2344555677766655
Q ss_pred -HHHHHhhh
Q 008144 481 -IQGTRWGS 488 (576)
Q Consensus 481 -~Qr~RWa~ 488 (576)
.|+.+|.+
T Consensus 226 ~~~~~~~~~ 234 (255)
T 1qg8_A 226 ELEKNEFVR 234 (255)
T ss_dssp -----CTGG
T ss_pred HHHHHHHHH
Confidence 45555543
No 6
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.79 E-value=8.2e-19 Score=191.97 Aligned_cols=113 Identities=15% Similarity=0.080 Sum_probs=93.8
Q ss_pred CCCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccC
Q 008144 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI 170 (576)
Q Consensus 91 ~~~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r 170 (576)
++.+|.|+|+||+|| |+...+.+||.|++++.||...++|+|+||||+|.|...+.
T Consensus 62 ~~~~p~vSVIIp~yN---~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~--------------------- 117 (501)
T 2ffu_A 62 RVDLPATSVVITFHN---EARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALL--------------------- 117 (501)
T ss_dssp CSSCCCEEEEEEESS---CCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGG---------------------
T ss_pred CcCCCCEEEEEEeCc---CcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHH---------------------
Confidence 356899999999999 66448999999999999997667999999999997742110
Q ss_pred CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCc
Q 008144 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPL 250 (576)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~ 250 (576)
...|+
T Consensus 118 ---------------------------------------------------------------------------~~~~~ 122 (501)
T 2ffu_A 118 ---------------------------------------------------------------------------GKIEK 122 (501)
T ss_dssp ---------------------------------------------------------------------------GGBTT
T ss_pred ---------------------------------------------------------------------------hcCCC
Confidence 01246
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCC
Q 008144 251 LVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDP 312 (576)
Q Consensus 251 l~yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp 312 (576)
+.++..++ +.|+++|+|.|++. ++||+|+++|+|.+++ |++|..++..+.+.
T Consensus 123 v~vi~~~~-----n~G~~~A~N~G~~~----A~gd~i~flD~D~~~~-p~~L~~ll~~~~~~ 174 (501)
T 2ffu_A 123 VRVLRNDR-----REGLMRSRVRGADA----AQAKVLTFLDSHCECN-EHWLEPLLERVAED 174 (501)
T ss_dssp EEEEECSS-----CCHHHHHHHHHHHH----CCSSEEEECCSSEEEC-TTCHHHHHHHHHHC
T ss_pred EEEEECCC-----CcCHHHHHHHHHHh----cCCCEEEEECCCcccC-ccHHHHHHHHHHhC
Confidence 88887665 36799999999999 8999999999999997 99999999988743
No 7
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.78 E-value=1.8e-18 Score=192.84 Aligned_cols=237 Identities=15% Similarity=0.068 Sum_probs=158.9
Q ss_pred CCCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccc-hHhHHHHHHhhhhhhhHHHhhCCccC
Q 008144 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPIT-LHGMREACRFAKWWLPFCRRYGIKTI 170 (576)
Q Consensus 92 ~~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T-~~~l~Ea~~fa~~w~pfc~~~~v~~r 170 (576)
+..|.|+|+||+|| |+.+.+.+||.|+++++||...++|+|+||||+|.| .+.+.+.+
T Consensus 109 ~~~P~vSVIIp~yN---e~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~------------------ 167 (570)
T 2d7i_A 109 ETLPNTSIIIPFHN---EGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYM------------------ 167 (570)
T ss_dssp SSCCCEEEEEEESS---CCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHH------------------
T ss_pred CCCCCeEEEEEECC---CCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHH------------------
Confidence 56899999999999 765699999999999999975569999999999988 33222110
Q ss_pred CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCc
Q 008144 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPL 250 (576)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~ 250 (576)
..+|+
T Consensus 168 ---------------------------------------------------------------------------~~~~~ 172 (570)
T 2d7i_A 168 ---------------------------------------------------------------------------ALFPS 172 (570)
T ss_dssp ---------------------------------------------------------------------------TTSTT
T ss_pred ---------------------------------------------------------------------------HhCCe
Confidence 01246
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc-CCCCCcceEEEcccceecc
Q 008144 251 LVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHN 329 (576)
Q Consensus 251 l~yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~-Dp~~g~~vg~VQ~pq~f~n 329 (576)
+.++..++ +.|+++|+|.|++. ++||||+++|+|..++ |++|..++..+. ++. + .|.....+.+
T Consensus 173 v~vi~~~~-----n~G~~~A~N~G~~~----A~gd~i~fLD~D~~~~-p~~L~~ll~~l~~~~~----~-vv~~~i~~~~ 237 (570)
T 2d7i_A 173 VRILRTKK-----REGLIRTRMLGASV----ATGDVITFLDSHCEAN-VNWLPPLLDRIARNRK----T-IVCPMIDVID 237 (570)
T ss_dssp EEEEECSS-----CCCHHHHHHHHHHH----CCSSEEEECCSSEEEC-TTCSHHHHHHHHHCTT----E-EEEEEEEEEC
T ss_pred EEEEECCC-----CCCHHHHHHHHHHh----cCCCEEEEEcCCcccc-ccHHHHHHHHHHhCCC----E-EEeeeeeccC
Confidence 78887654 36899999999999 8999999999999997 999999999887 443 2 2221111111
Q ss_pred CCc-------cChHHHH--HHHHHHHHHH----H----HhhcCCccccccceEEEcccccccccchhhhhhhcChhHHHH
Q 008144 330 INK-------YDIYDGR--FRSAYCVQWQ----G----MDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLIN 392 (576)
Q Consensus 330 ~~~-------~d~~~~~--~~~f~~~~~~----g----~d~~~g~~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~ 392 (576)
.+. ....... ...++..... . ......+..+|++.++||+++..+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~i------------------ 299 (570)
T 2d7i_A 238 HDDFRYETQAGDAMRGAFDWEMYYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWEL------------------ 299 (570)
T ss_dssp TTTCCEECCTTSSCEEEECTTCCEEEECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHHT------------------
T ss_pred CCchhhccccCCcccccccccccccccccchhhhccCCCcceecccccceEEEEEHHHHHhc------------------
Confidence 100 0000000 0000000000 0 011123346688889999999765
Q ss_pred hHHhhhhcccCCCCCCchhHHHhhcccccccccccCcccccccccCCCc---cccHHHHHHHHhcCCeEEEeCCCCCeeE
Q 008144 393 SLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSV---SEDLFTGFILHCKGWTSTYLTPFRPQFL 469 (576)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~a~~v~~c~ye~~t~wg~~~G~~~~si---tED~~t~~rl~~~Gwrs~y~~~~~~~~~ 469 (576)
+||+.+.. .||+++++|+...||+++|++. +.++
T Consensus 300 -----------------------------------------GgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~--~~v~ 336 (570)
T 2d7i_A 300 -----------------------------------------GGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPC--SRVG 336 (570)
T ss_dssp -----------------------------------------TSSCTTCCSSSSHHHHHHHHHHHTTCEEEEEEE--EEEE
T ss_pred -----------------------------------------CCCCCcccccCcchHHHHHHHHhCCCeEEEccC--eEEE
Confidence 46665543 5999999999999999999973 3333
Q ss_pred ee----cCCC-------HHHHHHHHHHhhhhhHHHHhhhcCCc
Q 008144 470 GT----STTN-------LNDLLIQGTRWGSGLTDVGLSRFCPL 501 (576)
Q Consensus 470 g~----aP~t-------l~~~l~Qr~RWa~G~~qv~~~~~~p~ 501 (576)
-. .|.+ .+...+-..||.....+.+..+ .|.
T Consensus 337 H~~r~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~y~~-~p~ 378 (570)
T 2d7i_A 337 HIYRKYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQR-RPE 378 (570)
T ss_dssp ECCCSSCCSCCCSSCCHHHHHHHHHHHHCGGGHHHHHTT-CGG
T ss_pred EEccccCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHhc-Ccc
Confidence 21 2311 4566677789999988887754 353
No 8
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.76 E-value=2.5e-18 Score=192.48 Aligned_cols=220 Identities=18% Similarity=0.171 Sum_probs=155.7
Q ss_pred CCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCc
Q 008144 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (576)
Q Consensus 93 ~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p 172 (576)
..|.|+|+||||| ++ +.+.+||.|+++++||. ++|+|+||||+|.|.+.+.+..
T Consensus 373 ~~~~vsiii~~yn---~~-~~l~~~l~s~~~q~~~~--~eiivvdd~S~d~t~~~~~~~~-------------------- 426 (625)
T 2z86_A 373 RVPLVSIYIPAYN---CS-KYIVRCVESALNQTITD--LEVCICDDGSTDDTLRILQEHY-------------------- 426 (625)
T ss_dssp SSCSEEEEEEESS---CT-TTHHHHHHHHHSSSCCS--EEEEEEEESCSSSHHHHHHHHH--------------------
T ss_pred cCCeEEEEEeCCC---CH-HHHHHHHHHHHhCcCCC--eEEEEEECcCChhHHHHHHHHH--------------------
Confidence 4689999999999 44 58999999999999996 9999999999998865332210
Q ss_pred ccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEE
Q 008144 173 QAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLV 252 (576)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~ 252 (576)
...|++.
T Consensus 427 -------------------------------------------------------------------------~~~~~i~ 433 (625)
T 2z86_A 427 -------------------------------------------------------------------------ANHPRVR 433 (625)
T ss_dssp -------------------------------------------------------------------------TTCTTEE
T ss_pred -------------------------------------------------------------------------hhCCcEE
Confidence 0123577
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc-CCCCCcceEEEcccceeccCC
Q 008144 253 YVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNIN 331 (576)
Q Consensus 253 yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~-Dp~~g~~vg~VQ~pq~f~n~~ 331 (576)
++. ++ +.|+++|+|.|++. ++||||+++|+|.++. |++|.+++..|. +|+ +++|.+...+.+.+
T Consensus 434 ~~~-~~-----n~G~~~a~n~g~~~----a~g~~i~~ld~D~~~~-~~~l~~~~~~~~~~~~----~~~v~~~~~~~~~~ 498 (625)
T 2z86_A 434 FIS-QK-----NKGIGSASNTAVRL----CRGFYIGQLDSDDFLE-PDAVELCLDEFRKDLS----LACVYTTNRNIDRE 498 (625)
T ss_dssp EEE-EC-----CCCHHHHHHHHHHH----CCSSEEEECCTTCEEC-TTHHHHHHHHHHHCTT----CSEEEEEEEEECTT
T ss_pred EEe-CC-----CCCHHHHHHHHHHh----cCCCEEEEECCCcccC-hhHHHHHHHHHHhCCC----eeEEEeeeEEECCC
Confidence 775 32 36899999999999 8999999999999997 999999998885 777 45565554443322
Q ss_pred ccChHHHH--HHHHHHHHHHHHhhcCCccccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCCCCCc
Q 008144 332 KYDIYDGR--FRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFS 409 (576)
Q Consensus 332 ~~d~~~~~--~~~f~~~~~~g~d~~~g~~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~ 409 (576)
.. ..... ... + ..+.+....++|++.++||+++..+
T Consensus 499 ~~-~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~r~~~~~~----------------------------------- 536 (625)
T 2z86_A 499 GN-LISNGYNWPI-Y-----SREKLTSAMICHHFRMFTARAWNLT----------------------------------- 536 (625)
T ss_dssp SC-EEEECCCCSS-C-----CHHHHTTSCCCCSCEEEEHHHHTTT-----------------------------------
T ss_pred CC-EeccCccccc-C-----CHHHHhhcccCCceEEEEHHHHHHh-----------------------------------
Confidence 11 00000 000 0 0111233457888899999998765
Q ss_pred hhHHHhhcccccccccccCcccccccccCC-CccccHHHHHHHHhcCCeEEEeCCCCCeeE---eecCCCHHHHHHHHHH
Q 008144 410 NVLQEETGVLASCSYEHQTKWGEEVGILYQ-SVSEDLFTGFILHCKGWTSTYLTPFRPQFL---GTSTTNLNDLLIQGTR 485 (576)
Q Consensus 410 ~~~~~~a~~v~~c~ye~~t~wg~~~G~~~~-sitED~~t~~rl~~~Gwrs~y~~~~~~~~~---g~aP~tl~~~l~Qr~R 485 (576)
|||+.. ...||.++.+++...| ++.|++. +... .....+.+....|+.+
T Consensus 537 ------------------------ggfd~~~~~~eD~dl~~r~~~~g-~~~~~~~--~~~~~r~h~~~~s~~~~~~~~~~ 589 (625)
T 2z86_A 537 ------------------------EGFNESISNAVDYDMYLKLSEVG-PFKHINK--ICYNRVLHGENTSIKKLDIQKEN 589 (625)
T ss_dssp ------------------------TCCCSSCSSCHHHHHHHHHTTTS-CEEEEEE--EEEEEECC----CCSSHHHHHHH
T ss_pred ------------------------CCCCCccCChHHHHHHHHHHHhC-CEEEeCC--cEEEEEECCCccchhhHHHHHHH
Confidence 567665 4579999999999999 8999873 5544 3345566777888888
Q ss_pred hhhhhHHHHh
Q 008144 486 WGSGLTDVGL 495 (576)
Q Consensus 486 Wa~G~~qv~~ 495 (576)
|.+...+.+.
T Consensus 590 ~~~~~~~~l~ 599 (625)
T 2z86_A 590 HFKVVNESLS 599 (625)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHHH
Confidence 8776655543
No 9
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=99.68 E-value=1.5e-16 Score=165.12 Aligned_cols=121 Identities=16% Similarity=0.032 Sum_probs=90.8
Q ss_pred CCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCc
Q 008144 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (576)
Q Consensus 93 ~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p 172 (576)
..|.|+|+||+|| |+ +.+.++|.|+++++||. ..+|+|+||||+|.|.+.+.+ ++.+
T Consensus 46 ~~~~vSViIp~yN---~~-~~l~~~l~sl~~q~~~~-~~eiivVDdgS~D~t~~~~~~--------------~~~~---- 102 (329)
T 3ckj_A 46 AGRTISVVLPALD---EE-DTIGSVIDSISPLVDGL-VDELIVLDSGSTDDTEIRAVA--------------AGAR---- 102 (329)
T ss_dssp TTCCEEEEEEESS---CT-TTHHHHHHHHGGGBTTT-BSEEEEEECSCCSSHHHHHHH--------------TTCE----
T ss_pred cCCcEEEEEeeCC---CH-HHHHHHHHHHHHhhCCC-CcEEEEEeCCCCchHHHHHHH--------------hhhh----
Confidence 4589999999999 44 47999999999999994 589999999999988643322 1000
Q ss_pred ccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEE
Q 008144 173 QAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLV 252 (576)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~ 252 (576)
+ .+++.
T Consensus 103 -----------------------------------------------------~---------------------~~~~~ 108 (329)
T 3ckj_A 103 -----------------------------------------------------V---------------------VSREQ 108 (329)
T ss_dssp -----------------------------------------------------E---------------------EEHHH
T ss_pred -----------------------------------------------------h---------------------cccee
Confidence 0 00111
Q ss_pred EEe-ccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCC-CCchHHHHHHHHHh-cCCCCCcceEEEccc
Q 008144 253 YVS-REKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMY-CNDPTSARQAMCFH-LDPKISSSLAFVQFP 324 (576)
Q Consensus 253 yv~-Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~-~~~pd~L~~~v~~f-~Dp~~g~~vg~VQ~p 324 (576)
++. .+ .+.||++|+|.|++. ++|+||+++|+|.+ +. |++|.+++..+ .+|+ +++|++.
T Consensus 109 ~~~~~~-----~n~G~~~a~n~g~~~----a~gd~i~~lD~D~~~~~-p~~l~~l~~~l~~~~~----~~~v~g~ 169 (329)
T 3ckj_A 109 ALPEVP-----IRPGKGEALWRSLAA----SRGDIVVFVDSDLINPH-PMFVPWLVGPLLTGDG----VHLVKSF 169 (329)
T ss_dssp HCTTSC-----CCCSHHHHHHHHHHH----CCCSEEEECCTTEESCC-TTHHHHHHHHHHSCSS----CCEEEEE
T ss_pred eeccCC-----CCCCHHHHHHHHHHh----CCCCEEEEECCCCCCcC-hHHHHHHHHHHHhCCC----ccEEEEE
Confidence 121 12 247899999999999 89999999999999 87 99999999885 5777 4555543
No 10
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=99.63 E-value=1.6e-15 Score=171.93 Aligned_cols=119 Identities=17% Similarity=0.107 Sum_probs=88.3
Q ss_pred CCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCce-EEEEEcCCCCccch-HhHHHHHHhhhhhhhHHHhhCCccC
Q 008144 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKL-HVYLSDDGGSPITL-HGMREACRFAKWWLPFCRRYGIKTI 170 (576)
Q Consensus 93 ~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl-~V~V~DDg~~~~T~-~~l~Ea~~fa~~w~pfc~~~~v~~r 170 (576)
.-|.|+|+||||| ++ +.+.++|.|+++++|+.++. +|+|+||||+|.+- ..+.+..
T Consensus 178 ~~pkVSVVIptYN---~~-~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~------------------ 235 (657)
T 4fix_A 178 GTANIAVGIPTFN---RP-ADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAA------------------ 235 (657)
T ss_dssp SCCCEEEECCBSS---CH-HHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHH------------------
T ss_pred CCCeEEEEEEecC---CH-HHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHH------------------
Confidence 4589999999999 55 58999999999999954444 99999999997421 1111100
Q ss_pred CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCc
Q 008144 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPL 250 (576)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~ 250 (576)
++ ..|+
T Consensus 236 -------------------------------~~-------------------------------------------~~~~ 241 (657)
T 4fix_A 236 -------------------------------AR-------------------------------------------LGSR 241 (657)
T ss_dssp -------------------------------HH-------------------------------------------HGGG
T ss_pred -------------------------------Hh-------------------------------------------cCCC
Confidence 00 0135
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc-CCCC
Q 008144 251 LVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKI 314 (576)
Q Consensus 251 l~yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~-Dp~~ 314 (576)
+.++..+ +.|.|+|.|.|++.+....++|||+++|+|.++. |++|.+++..+. +|++
T Consensus 242 I~vI~~~------N~G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~-pd~L~~ll~~l~~~~~~ 299 (657)
T 4fix_A 242 LSIHDQP------NLGGSGGYSRVMYEALKNTDCQQILFMDDDIRLE-PDSILRVLAMHRFAKAP 299 (657)
T ss_dssp EEEEECC------CCHHHHHHHHHHHHHHHHCCCSEEEEECSSEEEC-THHHHHHHHHHHHBSSC
T ss_pred EEEEECC------CCCHHHHHHHHHHHHHhcCCCCEEEEECCCCccC-hhHHHHHHHHHHhCCCc
Confidence 7888643 3689999999999831112679999999999998 999999999887 5553
No 11
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=99.61 E-value=4.1e-17 Score=186.62 Aligned_cols=195 Identities=11% Similarity=0.064 Sum_probs=0.0
Q ss_pred CceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccCCccc
Q 008144 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (576)
Q Consensus 95 P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~ 174 (576)
|.|+|+||||| ++ +.+.+||.|+++++||. ++|+|+||||+|.|.+.+.+.++
T Consensus 2 p~vSVIIp~yN---~~-~~L~~~L~Sll~Qt~~~--~EIIVVDDgStD~t~~il~~~~~--------------------- 54 (729)
T 3l7i_A 2 NKLTIIVTYYN---AE-EYITGCLESIKQQRTQD--FNLIIVNDGSTDQSKKLMDEAIK--------------------- 54 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceEEEEEEcCC---CH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCCcHHHHHHHHHH---------------------
Confidence 78999999999 44 58999999999999996 99999999999988653332110
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCcEEEE
Q 008144 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYV 254 (576)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~l~yv 254 (576)
.|+ +++.++
T Consensus 55 -------------------------~~~----------------------------------------------~~i~~i 63 (729)
T 3l7i_A 55 -------------------------DYD----------------------------------------------KNIRFI 63 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------------------hCC----------------------------------------------CCEEEE
Confidence 000 246667
Q ss_pred eccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCcceEEEcccceeccCCccC
Q 008144 255 SREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYD 334 (576)
Q Consensus 255 ~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d 334 (576)
..++ +.|+++|+|.|++. ++|+||+++|+|.++. |++|.+++..+.+++ +.+... ..+.. .. .
T Consensus 64 ~~~~-----n~G~~~arN~gi~~----A~gdyI~flD~Dd~~~-p~~l~~l~~~l~~~d----~v~~~~-~~~~~-~~-~ 126 (729)
T 3l7i_A 64 DLDE-----NSGHAHARNIALEE----VETPYFMFLDADDELA-SYAITFYLEKFNNTD----GLIAPI-HSFTT-QR-P 126 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ECCC-----CCCHHHHHHHHHHh----ccCCEEEEECCCCCCC-hhHHHHHHHHhcCCC----EEEEee-EEeec-CC-C
Confidence 6554 36899999999999 8999999999999997 999999999887444 222111 11111 11 1
Q ss_pred hHHHHHHHHHHHHHHHHhhcCCc--cccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCCCCCchhH
Q 008144 335 IYDGRFRSAYCVQWQGMDGLKGP--VLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVL 412 (576)
Q Consensus 335 ~~~~~~~~f~~~~~~g~d~~~g~--~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (576)
.+.......... ..+....... ...|.+.++||+++..++
T Consensus 127 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~rr~~l~~~g------------------------------------- 168 (729)
T 3l7i_A 127 QFVDLDRVRVEY-FNAKENINSFLRKQSACNIIFRTAIVRAHH------------------------------------- 168 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccceeeee-ecchhhHHHHhhccchhheeeeHHHHHHcC-------------------------------------
Confidence 110000000000 0011111111 235567899999997541
Q ss_pred HHhhcccccccccccCcccccccccCC-CccccHHHHHHHHhcCCeEEEeCC
Q 008144 413 QEETGVLASCSYEHQTKWGEEVGILYQ-SVSEDLFTGFILHCKGWTSTYLTP 463 (576)
Q Consensus 413 ~~~a~~v~~c~ye~~t~wg~~~G~~~~-sitED~~t~~rl~~~Gwrs~y~~~ 463 (576)
.||+.+ ...||.++.+++..+|+++.|+++
T Consensus 169 ---------------------l~fde~~~~~ED~d~~~rl~~~g~~i~~~~~ 199 (729)
T 3l7i_A 169 ---------------------IRFNENLNTYVDWSFVLEYMKYVNKFVRIFN 199 (729)
T ss_dssp ----------------------------------------------------
T ss_pred ---------------------CCcCCCCCcccCHHHHHHHHHhcCCEEEecC
Confidence 267666 368999999999999999999943
No 12
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=99.55 E-value=1e-13 Score=147.71 Aligned_cols=116 Identities=16% Similarity=0.055 Sum_probs=85.7
Q ss_pred CCCceEEEEecCCCCCCChHHHHHHHHHHHc--CCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhHHHhhCCccC
Q 008144 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMA--LDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI 170 (576)
Q Consensus 93 ~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~--ldYP~~kl~V~V~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r 170 (576)
..|.|+|+||||| |+ +.+.++|.++.+ ++||.+ .+|+|+||||+|.|.+.+.+ ++.+
T Consensus 92 ~~p~vSVVIP~yN---e~-~~l~~~l~sl~~~l~~~~~~-~EIIVVDDgStD~T~~i~~~--------------~~~~-- 150 (387)
T 3f1y_A 92 LGLTVSAVLPSRN---VA-DTVGGIIDEIHALNERAPLI-DQILVVDADSEDGTAGVAAS--------------HGAE-- 150 (387)
T ss_dssp HTCCEEEEEEESS---CT-TTHHHHHHHHHHHHHHSCCC-SEEEEEECSCSSSHHHHHHH--------------TTCE--
T ss_pred CCCeEEEEEEcCC---CH-HHHHHHHHHHHHHHhcCCCC-eEEEEEcCcCCccHHHHHHH--------------hCch--
Confidence 3589999999999 54 478999999987 477653 79999999999998653322 1100
Q ss_pred CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceehhhcccCcchhhhhccccCCCc
Q 008144 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPL 250 (576)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~l~~~i~~~~~~g~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~P~ 250 (576)
++. +.
T Consensus 151 -------------------------------------------------------v~~--------------------~~ 155 (387)
T 3f1y_A 151 -------------------------------------------------------VYS--------------------EN 155 (387)
T ss_dssp -------------------------------------------------------EEE--------------------GG
T ss_pred -------------------------------------------------------hcc--------------------cc
Confidence 000 00
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHHcCCCCCCCEEEEeCCCCC-CCchHHHHHHHHHhc-CCCC
Q 008144 251 LVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMY-CNDPTSARQAMCFHL-DPKI 314 (576)
Q Consensus 251 l~yv~Rekrpg~~~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~-~~~pd~L~~~v~~f~-Dp~~ 314 (576)
+.++..+ .+.||++|+|.|++. ++|+||+++|||.. +. |++|.+++..+. +|+.
T Consensus 156 ~~~i~~~-----~n~G~g~A~n~G~~~----A~gd~i~~lDaD~~~~~-p~~L~~l~~~l~~~p~~ 211 (387)
T 3f1y_A 156 ELMSGYG-----DAHGKGDAMWRALSV----TRGDLVLYIDADTRDFR-PQLAYGVLGPVLEVPGV 211 (387)
T ss_dssp GTTGGGC-----SCCSHHHHHHHHTTT----CCSSEEEECCTTCSSCC-THHHHTTHHHHHHSTTC
T ss_pred eeEecCC-----ccCCHHHHHHHHHHh----cCCCEEEEEcCCCCcCC-HHHHHHHHHHHHHCCCc
Confidence 1112222 247899999999999 89999999999999 77 999999998885 6664
No 13
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=99.51 E-value=2.5e-14 Score=146.57 Aligned_cols=136 Identities=11% Similarity=-0.023 Sum_probs=88.0
Q ss_pred ChHHHHHHHH----HHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcCCCCCcceEEEcccceeccCCccChHHHHHH
Q 008144 266 FKAGALNVLL----RVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFR 341 (576)
Q Consensus 266 ~KAgALN~aL----~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~~~~~~ 341 (576)
+||.++|.|+ +. ++||||+++|+|+++. |+.+. +... ..|..+... .+.+.
T Consensus 112 ~~a~a~N~G~~~al~~----A~gd~i~flD~D~i~~-~d~~~----~~~~----------~~p~~~~~~--~~~~~---- 166 (287)
T 2fy7_A 112 NRAKLLNVGFQEALKD----YDYTCFVFSDVDLIPM-NDHNA----YRCF----------SQPRHISVA--MDKFG---- 166 (287)
T ss_dssp CHHHHHHHHHHHHHHH----SCCCEEEEECTTEEES-BTTSC----CSCC----------SSCEECCCE--EGGGT----
T ss_pred chhhhhhhHHHHHHHh----CCCCEEEEECCCcccC-CCcce----EecC----------CCCceEEEe--ecccc----
Confidence 3778899988 77 8999999999999998 88521 1111 112111100 01100
Q ss_pred HHHHHHHHHHhhcCCccccccceEEEcccccccccchhhhhhhcChhHHHHhHHhhhhcccCCCCCCchhHHHhhccccc
Q 008144 342 SAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLAS 421 (576)
Q Consensus 342 ~f~~~~~~g~d~~~g~~~~Gtg~~~RR~AL~~i~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~ 421 (576)
| ...+ ..+.|.+.++||+++..+
T Consensus 167 --~------~~~~--~~~~G~~~~~rr~~f~~v----------------------------------------------- 189 (287)
T 2fy7_A 167 --F------SLPY--VQYFGGVSALSKQQFLTI----------------------------------------------- 189 (287)
T ss_dssp --T------SCSS--TTCCCSEEEEEHHHHHHT-----------------------------------------------
T ss_pred --c------CCCc--CceeeeEEEEEHHHHHHc-----------------------------------------------
Confidence 0 0001 235677788999999866
Q ss_pred ccccccCcccccccccCCCc---cccHHHHHHHHhcCCeEEEeCCCCCee----------EeecCCCHHHHHHHHHHhhh
Q 008144 422 CSYEHQTKWGEEVGILYQSV---SEDLFTGFILHCKGWTSTYLTPFRPQF----------LGTSTTNLNDLLIQGTRWGS 488 (576)
Q Consensus 422 c~ye~~t~wg~~~G~~~~si---tED~~t~~rl~~~Gwrs~y~~~~~~~~----------~g~aP~tl~~~l~Qr~RWa~ 488 (576)
+||+..-. .||.++.+|++.+||++.+.++..... ....|+.++.+.+||.||++
T Consensus 190 ------------gGFde~~~g~g~ED~Dl~~Rl~~~G~~i~~~~~~~~~~~~i~H~~~~~~~~n~~~~~~l~~~~~~~~~ 257 (287)
T 2fy7_A 190 ------------NGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHIRHSRDKKNEPNPQRFDRIAHTKETMLS 257 (287)
T ss_dssp ------------TSCCSCCSSCSCHHHHHHHHHHHTTCCCBCCCTTTCEEEECC---------CCCCCCCHHHHHHHTTT
T ss_pred ------------CCCCccccccccchHHHHHHHHHcCCeEEecCcccceeEEEecCCCcccCCCHHHHHHHhhcccEEcC
Confidence 46665433 499999999999999887433210111 34578999999999999999
Q ss_pred hhHHHHh
Q 008144 489 GLTDVGL 495 (576)
Q Consensus 489 G~~qv~~ 495 (576)
+++..+.
T Consensus 258 ~Gl~~~~ 264 (287)
T 2fy7_A 258 DGLNSLT 264 (287)
T ss_dssp SSGGGCC
T ss_pred CCcccCc
Confidence 9887763
No 14
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=99.20 E-value=1.1e-10 Score=116.28 Aligned_cols=40 Identities=8% Similarity=-0.076 Sum_probs=36.1
Q ss_pred hHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhcC
Q 008144 267 KAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 311 (576)
Q Consensus 267 KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~D 311 (576)
.|.|+|.|++. ++|||++++|+|++++ |++|.+++..+.+
T Consensus 62 ~a~a~N~Gi~~----A~g~yl~fln~D~~~~-~~~l~~l~~~~~~ 101 (249)
T 2nxv_A 62 GFSWHKQMLPR----CKGRYVIFCHEDVELV-DRGYDDLVAAIEA 101 (249)
T ss_dssp TTTHHHHHGGG----CCSSEEEEEETTEECS-SCCHHHHHHHHHH
T ss_pred HHHHHHHHHHh----cCCCEEEEECCCcccC-ccHHHHHHHHHHh
Confidence 46789999999 8999999999999997 9999999988863
No 15
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=99.00 E-value=8.4e-09 Score=110.17 Aligned_cols=42 Identities=19% Similarity=0.044 Sum_probs=37.2
Q ss_pred CCChHHHHHHHH----HHcCCCCCCCEEEEeCCCCC-CCchHHHHHHHHHhc
Q 008144 264 HHFKAGALNVLL----RVSGVISNSPYILGLDCDMY-CNDPTSARQAMCFHL 310 (576)
Q Consensus 264 ~~~KAgALN~aL----~~~~~~s~ge~Il~lDAD~~-~~~pd~L~~~v~~f~ 310 (576)
+.||++|+|.|+ .. ++||+|+++|||.. .+ |+.+.+++....
T Consensus 73 n~GkG~Al~~G~~~Al~~----a~gd~vv~mDADlq~~~-P~~i~~Ll~~l~ 119 (397)
T 2bo4_A 73 RPGKGDGMNTALRYFLEE----TQWERIHFYDADITSFG-PDWITKAEEAAD 119 (397)
T ss_dssp SSSHHHHHHHHHHHHHHH----CCCSEEEECCTTCSSCC-HHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHh----CCCCEEEEEcCCCCCCC-HHHHHHHHHHHH
Confidence 479999999999 77 89999999999997 56 999999888764
No 16
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=98.35 E-value=3e-06 Score=89.96 Aligned_cols=38 Identities=21% Similarity=0.193 Sum_probs=31.9
Q ss_pred CChHHHHHHHHHHcCCCC---CCCEEEEeCCCCCCCchHHHHHHHHH
Q 008144 265 HFKAGALNVLLRVSGVIS---NSPYILGLDCDMYCNDPTSARQAMCF 308 (576)
Q Consensus 265 ~~KAgALN~aL~~~~~~s---~ge~Il~lDAD~~~~~pd~L~~~v~~ 308 (576)
.||..|+-.|+.. + ++++|+++|||-+. |..+.+.+.-
T Consensus 143 ~GKG~Am~aGl~~----A~~~~gd~Vv~~DaDl~i--P~~v~~~~kg 183 (394)
T 2zu9_A 143 SGKGEGMLVGLLL----AKAIGAEYVGFVDADNYI--PGAVNEYVKD 183 (394)
T ss_dssp CSHHHHHHHHHHH----HHHTTCSEEEECCSCBSC--HHHHHHHHHH
T ss_pred CChHHHHHHHHHH----HhhCCCCEEEEEeCCCCC--HHHHHHHHHH
Confidence 4999999999998 6 89999999999943 8888665543
No 17
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=98.32 E-value=4.1e-06 Score=87.33 Aligned_cols=44 Identities=7% Similarity=-0.013 Sum_probs=37.1
Q ss_pred CCCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccch
Q 008144 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITL 145 (576)
Q Consensus 93 ~~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T~ 145 (576)
.+..++|+||+|| |+. +++.+++++.+.. .+|+|+||||.|.|.
T Consensus 51 i~~klSIVVPvYN---Ee~----~lLesVl~qi~~d--~eIIlVdDGS~D~s~ 94 (391)
T 2wvl_A 51 VLEQTAIVVPTRN---ERL----KLLEGVLSGIPHE--ALILVASNSSPDRFQ 94 (391)
T ss_dssp HHTTEEEEEEESS---CCH----HHHHHHHHTSCTT--SEEEEEECCCHHHHH
T ss_pred HHhceEEEEeccC---cHH----HHHHHHHhcCCCC--ceEEEEECCCCCChH
Confidence 3578999999999 653 4699999999775 999999999998773
No 18
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=97.98 E-value=1.8e-05 Score=82.76 Aligned_cols=46 Identities=17% Similarity=0.257 Sum_probs=39.9
Q ss_pred CCceEEEEecCCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccc
Q 008144 94 LPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPIT 144 (576)
Q Consensus 94 ~P~VdV~Iptyn~~~E~~~~v~~Tv~s~~~ldYP~~kl~V~V~DDg~~~~T 144 (576)
++.+.|+|+||| -| + +.+++.|+++++.+.++..|+|+|||+.+.|
T Consensus 1 ~~~~pViI~~yN---Rp-~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~ 46 (343)
T 1fo8_A 1 LAVIPILVIACD---RS-T-VRRCLDKLLHYRPSAELFPIIVSQDCGHEET 46 (343)
T ss_dssp CCCCCEEEEESS---CT-T-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHH
T ss_pred CCcccEEEEECC---cH-H-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHH
Confidence 356889999999 66 6 9999999999997777889999999998754
No 19
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=82.93 E-value=9 Score=38.64 Aligned_cols=33 Identities=21% Similarity=0.220 Sum_probs=27.5
Q ss_pred CCChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCc
Q 008144 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCND 298 (576)
Q Consensus 264 ~~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~ 298 (576)
.-.||..||.|...+. ...+++++-|.|.+|.|
T Consensus 96 ~FNRa~LlNvGf~ea~--~~~d~~ifHDVDLlP~d 128 (287)
T 3lw6_A 96 RFNRASLINVGFQFAS--DVYDYIAMHDVDLLPLN 128 (287)
T ss_dssp CCCHHHHHHHHHHHSC--TTCCEEEEECTTEEECC
T ss_pred ccchhheecccHHHHh--ccCCEEEEecccccccC
Confidence 3569999999999843 45799999999999984
No 20
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=47.45 E-value=1.1e+02 Score=29.26 Aligned_cols=44 Identities=14% Similarity=0.064 Sum_probs=30.6
Q ss_pred CChHHHHHHHHHHcCCCCCCCEEEEeCCCC-CCCchHHHHHHHHHhcC
Q 008144 265 HFKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFHLD 311 (576)
Q Consensus 265 ~~KAgALN~aL~~~~~~s~ge~Il~lDAD~-~~~~pd~L~~~v~~f~D 311 (576)
.|.++ +-.+++..+ ..+.+.++++++|+ .+. ++.+++++..+.+
T Consensus 74 ~Gt~~-~~~~~~~l~-~~~~d~vlv~~gD~Pli~-~~~i~~l~~~~~~ 118 (252)
T 3oam_A 74 SGTER-LAEVVAKMA-IPADHIVVNVQGDEPLIP-PAIIRQVADNLAA 118 (252)
T ss_dssp SHHHH-HHHHHHHTT-CCTTSEEEECCTTCTTCC-HHHHHHHHHHHHH
T ss_pred CcHHH-HHHHHHhcC-cCCCCEEEEEeCCeeecC-HHHHHHHHHHHHh
Confidence 45666 444555421 12578999999999 555 8999999988764
No 21
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=47.18 E-value=1.3e+02 Score=29.15 Aligned_cols=47 Identities=13% Similarity=-0.019 Sum_probs=32.0
Q ss_pred CChHHHHHHHHHHcCCCCCCCEEEEeCCCCCCCchHHHHHHHHHhc-CCC
Q 008144 265 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPK 313 (576)
Q Consensus 265 ~~KAgALN~aL~~~~~~s~ge~Il~lDAD~~~~~pd~L~~~v~~f~-Dp~ 313 (576)
.|.++ +..+++..+. .+.+.++++++|+-.-+++.+++++..+. +++
T Consensus 81 ~Gt~~-i~~a~~~l~~-~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~ 128 (256)
T 3tqd_A 81 SGTER-IAEAAVALGF-EDDEIIVCLQGDEPLIPPDAIRKLAEDLDEHDN 128 (256)
T ss_dssp SHHHH-HHHHHHHTTC-CTTCEEEEECTTCCCCCHHHHHHHHHHHHHCC-
T ss_pred CcHHH-HHHHHHHhCc-CCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCC
Confidence 35555 6667766321 25789999999994334899999998886 344
No 22
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=46.38 E-value=23 Score=35.19 Aligned_cols=30 Identities=23% Similarity=0.262 Sum_probs=25.1
Q ss_pred CCCCEEEEeCCCCCCCchHHHHHHHHHhcCCC
Q 008144 282 SNSPYILGLDCDMYCNDPTSARQAMCFHLDPK 313 (576)
Q Consensus 282 s~ge~Il~lDAD~~~~~pd~L~~~v~~f~Dp~ 313 (576)
.+.+.++.+|.|++++ .+-|.+.+..+ ||.
T Consensus 92 ~~~~Wf~~~DDDtyv~-~~nL~~~L~~~-d~~ 121 (280)
T 2j0a_A 92 SGLRWFCHVDDDNYVN-PKALLQLLKTF-PQD 121 (280)
T ss_dssp HTCSEEEEEETTEEEC-HHHHHHHHTTS-CTT
T ss_pred CCCcEEEEeCCCcEEc-HHHHHHHHHhC-CCC
Confidence 4789999999999997 88888887655 555
No 23
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=40.34 E-value=63 Score=29.63 Aligned_cols=41 Identities=15% Similarity=0.087 Sum_probs=32.4
Q ss_pred CChHHHHHHHHHHcCCCCCCCEEEEeCCCC-CCCchHHHHHHHHHh
Q 008144 265 HFKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFH 309 (576)
Q Consensus 265 ~~KAgALN~aL~~~~~~s~ge~Il~lDAD~-~~~~pd~L~~~v~~f 309 (576)
.|-++++..|++.. .+.+.+++++||+ .++ ++.+++++..+
T Consensus 71 ~G~~~si~~al~~~---~~~~~vlv~~~D~P~i~-~~~i~~l~~~~ 112 (197)
T 3d5n_A 71 EGISTSLKLGLRFF---KDYDAVLVALGDMPFVT-KEDVNKIINTF 112 (197)
T ss_dssp GCHHHHHHHHHHHT---TTSSEEEEEETTCCCSC-HHHHHHHHHTC
T ss_pred CCHHHHHHHHHHhh---ccCCcEEEEeCCccccC-HHHHHHHHHHh
Confidence 36788888999882 2348999999999 565 89999888766
No 24
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=32.47 E-value=33 Score=32.80 Aligned_cols=25 Identities=12% Similarity=0.022 Sum_probs=21.8
Q ss_pred CCCCEEEEeCCC---CCCCchHHHHHHHH
Q 008144 282 SNSPYILGLDCD---MYCNDPTSARQAMC 307 (576)
Q Consensus 282 s~ge~Il~lDAD---~~~~~pd~L~~~v~ 307 (576)
.++++++++||| .-.+ |+.+.+++.
T Consensus 52 ~~~dhllfIDAD~~~I~Fd-Pe~V~rLl~ 79 (203)
T 2c0n_A 52 KDYDTLAFLDEDVVPIEID-FQKVEAKFN 79 (203)
T ss_dssp TTCCEEEEECTTEEEEECC-HHHHHHHHH
T ss_pred CCCCEEEEEeCCCCccccC-HHHHHHHHh
Confidence 678999999999 8886 999988873
No 25
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=26.94 E-value=1.1e+02 Score=27.90 Aligned_cols=40 Identities=10% Similarity=0.194 Sum_probs=32.1
Q ss_pred ChHHHHHHHHHHcCCCCCCCEEEEeCCCC-CCCchHHHHHHHHHh
Q 008144 266 FKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFH 309 (576)
Q Consensus 266 ~KAgALN~aL~~~~~~s~ge~Il~lDAD~-~~~~pd~L~~~v~~f 309 (576)
+.++++..|++.. .+.+.+++++||+ .+. ++.+++++..+
T Consensus 78 ~~~~~i~~al~~~---~~~~~vlv~~~D~P~~~-~~~i~~l~~~~ 118 (223)
T 2xwl_A 78 DRTESVALALEAA---GDAEFVLVHDAARALTP-PALIARVVAAL 118 (223)
T ss_dssp SHHHHHHHHHTTC---TTCSEEEECCTTCTTCC-HHHHHHHHHHH
T ss_pred CHHHHHHHHHHhc---CCCCEEEEEcCCcccCC-HHHHHHHHHHH
Confidence 4688888888772 1678999999999 555 88999988877
No 26
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=24.13 E-value=89 Score=28.76 Aligned_cols=39 Identities=15% Similarity=0.179 Sum_probs=32.7
Q ss_pred CChHHHHHHHHHHcCCCCCCCEEEEeCCCC-CCCchHHHHHHHHH
Q 008144 265 HFKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCF 308 (576)
Q Consensus 265 ~~KAgALN~aL~~~~~~s~ge~Il~lDAD~-~~~~pd~L~~~v~~ 308 (576)
.|-++++-.|++. .+.+.+++++||+ .+. ++.+++++..
T Consensus 77 ~G~~~si~~~l~~----~~~~~vlv~~~D~P~i~-~~~i~~l~~~ 116 (201)
T 1e5k_A 77 PGPLAGMLSVMQQ----EAGEWFLFCPCDTPYIP-PDLAARLNHQ 116 (201)
T ss_dssp CSHHHHHHHHHHH----CCSSEEEEEETTCTTCC-TTHHHHHHHT
T ss_pred CCHHHHHHHHHHh----CCCCcEEEEeCCcCcCC-HHHHHHHHhh
Confidence 4788999999998 5679999999999 565 8888888765
No 27
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=22.16 E-value=99 Score=28.64 Aligned_cols=40 Identities=10% Similarity=0.024 Sum_probs=31.5
Q ss_pred CChHHHHHHHHHHcCCCCCCCEEEEeCCCC-CCCchHHHHHHHHHhc
Q 008144 265 HFKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFHL 310 (576)
Q Consensus 265 ~~KAgALN~aL~~~~~~s~ge~Il~lDAD~-~~~~pd~L~~~v~~f~ 310 (576)
.+.+++++ +++. .+.+.+++++||+ ..+ ++.+++++..+.
T Consensus 72 ~g~~~~~~-~~~~----~~~~~vlv~~~D~P~~~-~~~i~~l~~~~~ 112 (234)
T 2y6p_A 72 SGSDRVLY-VVRD----LDVDLIINYQGDEPFVY-EEDIKLIFRELE 112 (234)
T ss_dssp SHHHHHHH-HHTT----CCCSEEEECCTTCCCCC-HHHHHHHHHHHH
T ss_pred cchHHHHH-HHHh----CCCCEEEEecCCcCcCC-HHHHHHHHHHHH
Confidence 56777774 5555 4678999999999 776 899999988775
Done!