Citrus Sinensis ID: 008146
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 576 | 2.2.26 [Sep-21-2011] | |||||||
| Q9C9P4 | 541 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.937 | 0.998 | 0.725 | 0.0 | |
| P52410 | 473 | 3-oxoacyl-[acyl-carrier-p | no | no | 0.732 | 0.892 | 0.570 | 1e-142 | |
| P23902 | 462 | 3-oxoacyl-[acyl-carrier-p | N/A | no | 0.715 | 0.891 | 0.560 | 1e-137 | |
| Q9KQH9 | 414 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.704 | 0.980 | 0.461 | 4e-99 | |
| Q83E37 | 414 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.708 | 0.985 | 0.456 | 4e-98 | |
| P73283 | 416 | 3-oxoacyl-[acyl-carrier-p | N/A | no | 0.715 | 0.990 | 0.452 | 3e-97 | |
| P55338 | 415 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.706 | 0.980 | 0.454 | 6e-97 | |
| O34340 | 413 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.711 | 0.992 | 0.443 | 4e-93 | |
| Q8NXE1 | 414 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.710 | 0.987 | 0.411 | 9e-88 | |
| Q6GAU2 | 414 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.710 | 0.987 | 0.411 | 9e-88 |
| >sp|Q9C9P4|KASC2_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic OS=Arabidopsis thaliana GN=KAS2 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 821 bits (2121), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/576 (72%), Positives = 469/576 (81%), Gaps = 36/576 (6%)
Query: 1 MASSCSFTSPLCTWLVAACMSFTCGSRDPHQPPSVLRRYTNNKREGLSAARRRKLSAKCG 60
+ +S S+ SPLCTW VAACMS + G D Q ++ + +R LS KC
Sbjct: 2 VGASSSYASPLCTWFVAACMSVSHGGGDSRQAVALQSGGRSRRRRQLS---------KCS 52
Query: 61 VGGEVVNGSLVSSFSGSSHSIQSLMASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNN 120
V SGS+ SIQ+L+ SCL F PC Y + +N SS FGSN
Sbjct: 53 VA------------SGSA-SIQALVTSCLDFGPCTHYNN---------NNALSSLFGSN- 89
Query: 121 STATLNRRQRRLRLNRVTRSGEAMAVAVQPDEEVTTKKKPHMKQKRVVVTGMGLVSPLGH 180
+ +LNR QRRL NR SG AMAV ++ ++E KKP +Q+RVVVTGMG+ + LGH
Sbjct: 90 -SVSLNRNQRRL--NRAASSGGAMAV-MEMEKEAAVNKKPPTEQRRVVVTGMGVETSLGH 145
Query: 181 EPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLL 240
+P FY NLL+G SGIS+IE FDC+ FPT+IA EIKSFST+GWVAPKLSKRMDKFMLYLL
Sbjct: 146 DPHTFYENLLQGNSGISQIENFDCSEFPTRIAGEIKSFSTEGWVAPKLSKRMDKFMLYLL 205
Query: 241 TAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPF 300
TAGKKALADGG+T++VM E DK+KCGVLIGS +GGMKVFYDAIEALRISYKKMNPFCVPF
Sbjct: 206 TAGKKALADGGVTDEVMAEFDKTKCGVLIGSAMGGMKVFYDAIEALRISYKKMNPFCVPF 265
Query: 301 ATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIP 360
ATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILN+ANHII+GEA+VMLCGGSDA +IP
Sbjct: 266 ATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNSANHIIKGEADVMLCGGSDAVIIP 325
Query: 361 IGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAE 420
IGLGGFVACRALSQRNNDPTKASRPWD NRDGFVMGEGAGVLLLEELEHAKKRGA IYAE
Sbjct: 326 IGLGGFVACRALSQRNNDPTKASRPWDTNRDGFVMGEGAGVLLLEELEHAKKRGATIYAE 385
Query: 421 FRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQ 480
F GGSFT DAYHMTEPHPDG GVILCIE+ALA +G+S+E +NYINAHATST AGDIKEYQ
Sbjct: 386 FLGGSFTCDAYHMTEPHPDGAGVILCIERALASAGISKEQINYINAHATSTHAGDIKEYQ 445
Query: 481 ALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDT 540
AL HCFGQN L+VNSTKSMIGHLLGAAGAVEA+A VQAIRTGW+HPNINLENPD+ VDT
Sbjct: 446 ALAHCFGQNPELKVNSTKSMIGHLLGAAGAVEAVATVQAIRTGWVHPNINLENPDSGVDT 505
Query: 541 NVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 576
+LVGPKKERL++KAALSNSFGFGGHNSSIIF+PYK
Sbjct: 506 KLLVGPKKERLDIKAALSNSFGFGGHNSSIIFAPYK 541
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Essential protein that catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Specific for elongation from C-16 and C-16 to unsaturated C-18 fatty acids. Confers resistance to low temperatures by maintaining chloroplast membranes integrity. Involved in the regulation of fatty acids ratios during seed metabolism. Required for embryo development, especially at the transition from the globular to the heart stage. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 4EC: 1 |
| >sp|P52410|KASC1_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Arabidopsis thaliana GN=KAS1 PE=1 SV=2 | Back alignment and function description |
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Score = 506 bits (1303), Expect = e-142, Method: Compositional matrix adjust.
Identities = 242/424 (57%), Positives = 316/424 (74%), Gaps = 2/424 (0%)
Query: 154 VTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAA 213
V+ K+ +KRVV+TGMGLVS G++ D +Y LL G SGIS I+ FD + FPT+
Sbjct: 50 VSAPKRETDPKKRVVITGMGLVSVFGNDVDAYYEKLLSGESGISLIDRFDASKFPTRFGG 109
Query: 214 EIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGL 273
+I+ FS++G++ K +R+D + Y + AGKKAL + D +N +DK K GVL+G+G+
Sbjct: 110 QIRGFSSEGYIDGKNERRLDDCLKYCIVAGKKALESANLGGDKLNTIDKRKAGVLVGTGM 169
Query: 274 GGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNF 332
GG+ VF + ++ L +++++PF +P+A TNMGSA+LA+DLG MGPNYSISTACATSN+
Sbjct: 170 GGLTVFSEGVQNLIEKGHRRISPFFIPYAITNMGSALLAIDLGLMGPNYSISTACATSNY 229
Query: 333 CILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDG 392
C AANHI RGEA++M+ GG++AA+IPIGLGGFVACRALSQRN+DP ASRPWD RDG
Sbjct: 230 CFYAAANHIRRGEADMMIAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKARDG 289
Query: 393 FVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALA 452
FVMGEGAGVL++E LEHA KRGA I AE+ GG+ DA+HMT+P DG+GV CIE+ L
Sbjct: 290 FVMGEGAGVLVMESLEHAMKRGAPIVAEYLGGAVNCDAHHMTDPRADGLGVSSCIERCLE 349
Query: 453 HSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVE 512
+GVS E+VNYINAHATST AGD+ E A+ F G+++N+TKSMIGH LGAAG +E
Sbjct: 350 DAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKSTSGIKINATKSMIGHCLGAAGGLE 409
Query: 513 AIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIF 572
AIA V+AI TGW+HP+IN NP+ VD + + KK+ EV A+SNSFGFGGHNS + F
Sbjct: 410 AIATVKAINTGWLHPSINQFNPEQAVDFDTVPNEKKQH-EVDVAISNSFGFGGHNSVVAF 468
Query: 573 SPYK 576
S +K
Sbjct: 469 SAFK 472
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Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Specific for elongation from C-10 to unsaturated C-16 and C-18 fatty acids. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|P23902|KASC1_HORVU 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Hordeum vulgare GN=KAS12 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 488 bits (1256), Expect = e-137, Method: Compositional matrix adjust.
Identities = 233/416 (56%), Positives = 309/416 (74%), Gaps = 4/416 (0%)
Query: 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGW 223
+KRVV+TGMGL S G + D FY+ LL G SG+ I+ FD +SFPT+ A +I+ FS++G+
Sbjct: 47 RKRVVITGMGLASVFGSDVDTFYDRLLAGESGVGPIDRFDASSFPTRFAGQIRGFSSEGY 106
Query: 224 VAPKLSKRMDKFMLYLLTAGKKALADGGIT--EDVMNELDKSKCGVLIGSGLGGMKVFYD 281
+ K +R+D + Y + +GKKAL G+ D +LD + GVL+G+G+GG+ VF D
Sbjct: 107 IDGKNDRRLDDCIRYCILSGKKALESAGLGAGSDAHVKLDVGRAGVLVGTGMGGLSVFSD 166
Query: 282 AIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 340
++ L Y+K++PF +P+A TNMGSA+LA+D+G+MGPNYSISTACATSN+C AANH
Sbjct: 167 GVQNLIEKGYRKISPFFIPYAITNMGSALLAIDVGFMGPNYSISTACATSNYCFYAAANH 226
Query: 341 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 400
I RGEA++++ GG++AA+IPIGLGGFVACRALSQRN+DP A RPWD RDGFVMGEGAG
Sbjct: 227 IRRGEADIIVAGGTEAAIIPIGLGGFVACRALSQRNDDPITACRPWDKERDGFVMGEGAG 286
Query: 401 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 460
VL++E LEHA KR A I AE+ GG+ DAYHMT+P DG+GV CI +L +GV+ E+
Sbjct: 287 VLVMESLEHAMKRDAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCITMSLRDAGVAPEE 346
Query: 461 VNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAI 520
VNYINAHATST AGD+ E +A+ F +++NSTKSMIGH LGAAG +EAIA +++I
Sbjct: 347 VNYINAHATSTLAGDLAEVRAIKQVFKNPSEIKINSTKSMIGHCLGAAGGLEAIATIKSI 406
Query: 521 RTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 576
TGW+HP IN NP+ VD + + KK+ EV +SNSFGFGGHNS ++F+P+K
Sbjct: 407 TTGWVHPTINQFNPEPEVDFDTVANEKKQH-EVNVGISNSFGFGGHNSVVVFAPFK 461
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Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Specific for elongation from C-10 to unsaturated C-16 and C-18 fatty acids. Hordeum vulgare (taxid: 4513) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q9KQH9|FABF_VIBCH 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=fabF PE=3 SV=3 | Back alignment and function description |
|---|
Score = 362 bits (929), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 192/416 (46%), Positives = 274/416 (65%), Gaps = 10/416 (2%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 221
M ++RVVVTGMG++SP+G+ + + LL G SGI IE FD T+F T+ A +K F +
Sbjct: 1 MSKRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKGFDCE 60
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 281
+++ K +++MD F+ Y + AG +AL D G+ +NE + ++ GV IGSG+GG+++
Sbjct: 61 QYMSKKDARKMDLFIQYGIAAGIQALEDSGLE---VNEENAARIGVAIGSGIGGLELIET 117
Query: 282 AIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 340
+AL +K++PF VP NM + L++ G GPN +ISTAC T I +AA
Sbjct: 118 GHQALIEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARM 177
Query: 341 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 400
I G+A+ M+ GG++ A P+G+ GF A +ALS RN++P KASRPWD +RDGFV+G+GAG
Sbjct: 178 IAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGDGAG 237
Query: 401 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 460
+++LEE EHAK RGAKIYAE G + DAYHMT P DG G L +E A+ +GV+ E
Sbjct: 238 IMVLEEYEHAKARGAKIYAEVVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQ 297
Query: 461 VNYINAHATSTPAGDIKEYQALIHCFGQ--NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQ 518
+ Y+NAH TSTPAGD+ E + + G+ + + V+STKSM GHLLGAAG+VEAI V
Sbjct: 298 IGYVNAHGTSTPAGDVAEVKGIKRALGEAGTKQVLVSSTKSMTGHLLGAAGSVEAIITVM 357
Query: 519 AIRTGWIHPNINLENPDAVVDTNVL--VGPKKERLEVKAALSNSFGFGGHNSSIIF 572
++ + P INL+NP+ + +++ V K E +E A+ NSFGFGG N S+IF
Sbjct: 358 SLVDQMVPPTINLDNPEEGLGVDLVPHVARKVESMEY--AMCNSFGFGGTNGSLIF 411
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Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis. Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) (taxid: 243277) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|Q83E37|FABF_COXBU 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Coxiella burnetii (strain RSA 493 / Nine Mile phase I) GN=fabF PE=1 SV=1 | Back alignment and function description |
|---|
Score = 359 bits (921), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 189/414 (45%), Positives = 265/414 (64%), Gaps = 6/414 (1%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 221
M+++RVV+TG+G+VSPLG++ + LL G SG+ I FD +SFPT+IAAE++ F
Sbjct: 1 MEKRRVVITGLGVVSPLGNKVSDMWQALLAGKSGVKPITRFDASSFPTQIAAEVRDFDPA 60
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 281
+ K ++ D F+ + + + ++A D G+ +NE + + GV IGSG+GGM
Sbjct: 61 LVLDLKSIRKTDVFVQFAMESARQAWEDSGLE---INETNAPRVGVAIGSGIGGMPWIEK 117
Query: 282 AIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 340
+AL S +K++PF +P A NM S M+++ GPN SI TAC T I +AA
Sbjct: 118 NYDALLTSGPRKISPFFIPGAIINMASGMVSIKYDLKGPNISIVTACTTGLHNIGHAARM 177
Query: 341 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 400
I +A+ M+ GG++ A P+G+GGF A RALS RN++P KASRPWD RDGFV+GEGA
Sbjct: 178 IAHNDADAMIAGGTEMASTPLGIGGFAAVRALSTRNDEPEKASRPWDKGRDGFVLGEGAA 237
Query: 401 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 460
+++EELEHAKKR A IYAE G + DAYHMT P P+ G C++ +L +G++ E
Sbjct: 238 CVVVEELEHAKKRNATIYAEIIGFGMSGDAYHMTRPDPEAEGFTTCMKNSLRDAGIAPER 297
Query: 461 VNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQA 519
V+YINAH TSTPA D E +A+ FG + L V+STKSM GH+LGAAGA+E + V A
Sbjct: 298 VDYINAHGTSTPAADPLEARAIKKTFGDHAYKLAVSSTKSMTGHMLGAAGALETVISVLA 357
Query: 520 IRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573
IR P INLENPD D + + +E +++ +SNSFGFGG N +++ S
Sbjct: 358 IRDNTAPPTINLENPDEGCDLDFVPNEARE-MKIDTVMSNSFGFGGTNGTLVLS 410
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Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis. Coxiella burnetii (strain RSA 493 / Nine Mile phase I) (taxid: 227377) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|P73283|FABF_SYNY3 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=fabF PE=1 SV=1 | Back alignment and function description |
|---|
Score = 356 bits (914), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 189/418 (45%), Positives = 262/418 (62%), Gaps = 6/418 (1%)
Query: 161 HMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFST 220
++++KRVVVTG+G ++P+G+ ++ L+EG +GI I FD + + E+K F
Sbjct: 3 NLEKKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDA 62
Query: 221 DGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFY 280
++ K +KRMD+F + + A ++A+ D + V+NEL+ + GVLIG+G+GG+KV
Sbjct: 63 TQFLDRKEAKRMDRFCHFAVCASQQAINDAKL---VINELNADEIGVLIGTGIGGLKVLE 119
Query: 281 DAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAAN 339
D L + +PF +P NM S + A++LG GPN TACA + I +A
Sbjct: 120 DQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFR 179
Query: 340 HIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGA 399
+ G A M+CGG++AA+ P+ GF + RALS RN+DP ASRP+D +RDGFVMGEG+
Sbjct: 180 LVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRDGFVMGEGS 239
Query: 400 GVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRE 459
G+L+LEELE A RGAKIY E G + T DAYH+T P PDG G I AL SG+ E
Sbjct: 240 GILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPE 299
Query: 460 DVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQ 518
V+YINAH TSTPA D+ E +A+ G + + V+STKSM GHLLG +G +EA+A V
Sbjct: 300 MVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVM 359
Query: 519 AIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 576
AI + P INLENPD D + + G + L V ALSNSFGFGGHN ++ F Y+
Sbjct: 360 AIAEDKVPPTINLENPDPECDLDYVPG-QSRALIVDVALSNSFGFGGHNVTLAFKKYQ 416
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Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates. Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|P55338|FABF_VIBHA 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio harveyi GN=fabF PE=3 SV=2 | Back alignment and function description |
|---|
Score = 355 bits (910), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 188/414 (45%), Positives = 269/414 (64%), Gaps = 7/414 (1%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 221
M ++RVVVTGMG++SP+G+ + + LLEG SGI IE FD T+F T+ A +K F
Sbjct: 1 MSKRRVVVTGMGMLSPVGNTVESSWKALLEGQSGIVNIEHFDATNFSTRFAGLVKDFDCT 60
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 281
+++ K +++MD F+ Y + AG +AL D G+ + E + ++ GV IGSG+GG+ +
Sbjct: 61 EYMSKKDARKMDLFIQYGIAAGIQALDDSGLE---ITEENAARVGVAIGSGIGGLDLIEA 117
Query: 282 AIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 340
AL +K++PF VP NM + L++ G GPN +ISTAC T I +AA
Sbjct: 118 GHSALVEKGPRKVSPFFVPSTIVNMVAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARM 177
Query: 341 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 400
I G+A M+ GG++ A P+G+ GF A +ALS RN++P KASRPWD RDGFV+G+GAG
Sbjct: 178 IAYGDAEAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKGRDGFVLGDGAG 237
Query: 401 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 460
V++LEE EHAK RGAKIYAE G + DAYHMT P DG G L +E A+ + ++
Sbjct: 238 VMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDANITGTQ 297
Query: 461 VNYINAHATSTPAGDIKEYQALIHCFGQ--NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQ 518
V Y+NAH TSTPAGD+ E + + G+ ++ + V+STKSM GHLLGAAG+VEAI V
Sbjct: 298 VGYVNAHGTSTPAGDVAEIKGVKRALGEEGSKQVLVSSTKSMTGHLLGAAGSVEAIITVL 357
Query: 519 AIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIF 572
++ + P INL++P+ +D + LV +++++ A+ NSFGFGG N S++F
Sbjct: 358 SLVDQIVPPTINLDDPEEGLDID-LVPHTARKVDMEYAICNSFGFGGTNGSLVF 410
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Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis. Vibrio harveyi (taxid: 669) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|O34340|FABF_BACSU 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Bacillus subtilis (strain 168) GN=fabF PE=3 SV=1 | Back alignment and function description |
|---|
Score = 342 bits (878), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 185/417 (44%), Positives = 264/417 (63%), Gaps = 7/417 (1%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 221
M +KRVVVTG+G +SPLG++ D +NN + GVSGI I D +P K+AAE+K F+ +
Sbjct: 1 MTKKRVVVTGLGALSPLGNDVDTSWNNAINGVSGIGPITRVDAEEYPAKVAAELKDFNVE 60
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 281
++ K +++MD+F Y + A K A+ D + ++ +E+ + GV +GSG+GG++
Sbjct: 61 DYMDKKEARKMDRFTQYAVVAAKMAVEDADL--NITDEI-APRVGVWVGSGIGGLETLES 117
Query: 282 AIEA-LRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 340
E L ++++PF VP +M + +++ LG G N TACAT I +A
Sbjct: 118 QFEIFLTKGPRRVSPFFVPMMIPDMATGQISIALGAKGVNSCTVTACATGTNSIGDAFKV 177
Query: 341 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 400
I RG+A+VM+ GG++A + + GF A +ALS N DP ASRP+D NRDGFVMGEGAG
Sbjct: 178 IQRGDADVMVTGGTEAPLTRMSFAGFSANKALST-NPDPKTASRPFDKNRDGFVMGEGAG 236
Query: 401 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 460
+++LEELEHA RGAKIY E G T DAYH+T P DG G +++A+ +G++ E+
Sbjct: 237 IIVLEELEHALARGAKIYGEIVGYGSTGDAYHITAPAQDGEGGARAMQEAIKDAGIAPEE 296
Query: 461 VNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQA 519
++YINAH TST D E A+ FG++ L V+STKSM GHLLGAAG +EAI + A
Sbjct: 297 IDYINAHGTSTYYNDKYETMAIKTVFGEHAHKLAVSSTKSMTGHLLGAAGGIEAIFSILA 356
Query: 520 IRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 576
I+ G I P IN++ PD D + V + R E+ LSNS GFGGHN+++IF Y+
Sbjct: 357 IKEGVIPPTINIQTPDEECDLD-YVPDEARRQELNYVLSNSLGFGGHNATLIFKKYQ 412
|
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Bacillus subtilis (strain 168) (taxid: 224308) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|Q8NXE1|FABF_STAAW 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain MW2) GN=fabF PE=1 SV=1 | Back alignment and function description |
|---|
Score = 324 bits (831), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 171/416 (41%), Positives = 260/416 (62%), Gaps = 7/416 (1%)
Query: 163 KQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDG 222
+ KRVV+TGMG +SP+G++ + N L+GV+GI +I D + +A E+K+F+ +
Sbjct: 3 QNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIED 62
Query: 223 WVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDA 282
+ K ++RMD+F Y + A ++A+ D + +NE + GV IGSG+GGM+ F A
Sbjct: 63 HIDKKEARRMDRFTQYAIVAAREAVKDAQLD---INENTADRIGVWIGSGIGGMETFEIA 119
Query: 283 IEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHI 341
+ L ++++PF VP +M + +++DLG GPN + TACAT I A +
Sbjct: 120 HKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIV 179
Query: 342 IRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGV 401
RG+A+ M+ GG++A + + + GF A RALS N+D A RP+ RDGFVMGEGAG+
Sbjct: 180 QRGDADAMITGGTEAPITHMAIAGFSASRALST-NDDIETACRPFQEGRDGFVMGEGAGI 238
Query: 402 LLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDV 461
L++E LE A+ RGA IYAE G T DAYH+T P P+G G ++ A+ +G+ +DV
Sbjct: 239 LVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDV 298
Query: 462 NYINAHATSTPAGDIKEYQALIHCFGQ-NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAI 520
Y+NAH TSTP GD+ E +A+ + FG+ + L+V+STKSM GHLLGA G +EAI +I
Sbjct: 299 QYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSI 358
Query: 521 RTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 576
+ + P I+ PD D ++ V + + L++ A+SNS GFGGHN+ ++F ++
Sbjct: 359 KDSKVAPTIHAVTPDPECDLDI-VPNEAQDLDITYAMSNSLGFGGHNAVLVFKKFE 413
|
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Staphylococcus aureus (strain MW2) (taxid: 196620) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|Q6GAU2|FABF_STAAS 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain MSSA476) GN=fabF PE=3 SV=1 | Back alignment and function description |
|---|
Score = 324 bits (831), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 171/416 (41%), Positives = 260/416 (62%), Gaps = 7/416 (1%)
Query: 163 KQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDG 222
+ KRVV+TGMG +SP+G++ + N L+GV+GI +I D + +A E+K+F+ +
Sbjct: 3 QNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIED 62
Query: 223 WVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDA 282
+ K ++RMD+F Y + A ++A+ D + +NE + GV IGSG+GGM+ F A
Sbjct: 63 HIDKKEARRMDRFTQYAIVAAREAVKDAQLD---INENTADRIGVWIGSGIGGMETFEIA 119
Query: 283 IEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHI 341
+ L ++++PF VP +M + +++DLG GPN + TACAT I A +
Sbjct: 120 HKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIV 179
Query: 342 IRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGV 401
RG+A+ M+ GG++A + + + GF A RALS N+D A RP+ RDGFVMGEGAG+
Sbjct: 180 QRGDADAMITGGTEAPITHMAIAGFSASRALST-NDDIETACRPFQEGRDGFVMGEGAGI 238
Query: 402 LLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDV 461
L++E LE A+ RGA IYAE G T DAYH+T P P+G G ++ A+ +G+ +DV
Sbjct: 239 LVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDV 298
Query: 462 NYINAHATSTPAGDIKEYQALIHCFGQ-NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAI 520
Y+NAH TSTP GD+ E +A+ + FG+ + L+V+STKSM GHLLGA G +EAI +I
Sbjct: 299 QYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSI 358
Query: 521 RTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 576
+ + P I+ PD D ++ V + + L++ A+SNS GFGGHN+ ++F ++
Sbjct: 359 KDSKVAPTIHAVTPDPECDLDI-VPNEAQDLDITYAMSNSLGFGGHNAVLVFKKFE 413
|
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Staphylococcus aureus (strain MSSA476) (taxid: 282459) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 576 | ||||||
| 300507129 | 576 | KASII [Gossypium hirsutum] | 0.993 | 0.993 | 0.782 | 0.0 | |
| 225444641 | 555 | PREDICTED: 3-oxoacyl-[acyl-carrier-prote | 0.954 | 0.990 | 0.764 | 0.0 | |
| 346995771 | 573 | beta-ketoacyl-ACP synthase II [Jatropha | 0.963 | 0.968 | 0.755 | 0.0 | |
| 255550355 | 554 | 46 kDa ketoavyl-ACP synthase [Ricinus co | 0.961 | 1.0 | 0.75 | 0.0 | |
| 210110425 | 548 | beta-ketoacyl-ACP synthase II-1 [Arachis | 0.946 | 0.994 | 0.747 | 0.0 | |
| 297738522 | 517 | unnamed protein product [Vitis vinifera] | 0.892 | 0.994 | 0.741 | 0.0 | |
| 3800747 | 546 | 3-ketoacyl-ACP synthase [Cuphea avigera | 0.942 | 0.994 | 0.756 | 0.0 | |
| 1698690 | 540 | beta-ketoacyl-ACP synthase II [Cuphea wr | 0.914 | 0.975 | 0.761 | 0.0 | |
| 19698877 | 541 | putative 3-ketoacyl-ACP synthase [Arabid | 0.937 | 0.998 | 0.723 | 0.0 | |
| 297742964 | 546 | unnamed protein product [Vitis vinifera] | 0.934 | 0.985 | 0.738 | 0.0 |
| >gi|300507129|gb|ADK23940.1| KASII [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 895 bits (2313), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/580 (78%), Positives = 490/580 (84%), Gaps = 8/580 (1%)
Query: 1 MASSCSFTSPLCTWLVAACMSFTCGSRDPHQPPSVLRRYTNNKREGLSAARRRK-LSAKC 59
M +S S SPLCTWLVAACMS T G P ++ R G A RRK L ++C
Sbjct: 1 MMASSSLASPLCTWLVAACMSVTYGKDQSRSPLFNSSASASSNRLGRWARNRRKALLSQC 60
Query: 60 GVGGEVVNGS--LVSSFSGSSHSIQSLMASCLPFEPCNEYYSSVSSLGFFGDNG-FSSFF 116
GG N L+SSF GS+ IQ LMASCL FEPC++YYSS + FFG NG FSSFF
Sbjct: 61 CGGGATPNKDVGLISSFRGST--IQGLMASCLAFEPCDDYYSSKNG-SFFGQNGSFSSFF 117
Query: 117 GSNNSTATLNRRQRRLRLNRVTRSGEAMAVAVQPDEEVTTKKKPHMKQKRVVVTGMGLVS 176
GS N NR Q+RL R SG+AMA+AVQP E+TTKKKP KQ+RVVVTGMG+V+
Sbjct: 118 GSKNVPFNKNREQKRLN-RRAHHSGQAMAIAVQPTREITTKKKPPTKQRRVVVTGMGVVT 176
Query: 177 PLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFM 236
PLGHEPDVFYNNLLEGVSGISEIETFDC FPT+IA EIKSFSTDGWVAPKLSKRMDKFM
Sbjct: 177 PLGHEPDVFYNNLLEGVSGISEIETFDCAQFPTRIAGEIKSFSTDGWVAPKLSKRMDKFM 236
Query: 237 LYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPF 296
LY LTAGKKAL DGG+ EDVM ELDK+KCG LIGS +GGMKVF DAIEALRISY+KMNPF
Sbjct: 237 LYSLTAGKKALQDGGVNEDVMEELDKTKCGALIGSAMGGMKVFNDAIEALRISYRKMNPF 296
Query: 297 CVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDA 356
CVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEA++MLCGGSDA
Sbjct: 297 CVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEADMMLCGGSDA 356
Query: 357 AVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAK 416
A+IPIGLGGFVACRALSQRNNDPTKASRPWD NRDGFVMGEGAGVLLLEELEHAK+RGA
Sbjct: 357 AIIPIGLGGFVACRALSQRNNDPTKASRPWDANRDGFVMGEGAGVLLLEELEHAKRRGAT 416
Query: 417 IYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDI 476
IYAEF GGSFT DAYHMTEPHPDGVGVILCIE+ALAH+GVSR D+NYINA ATSTP GDI
Sbjct: 417 IYAEFLGGSFTCDAYHMTEPHPDGVGVILCIEEALAHAGVSRGDINYINARATSTPTGDI 476
Query: 477 KEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDA 536
KEYQAL+HCFG+N LRVNSTKSMIGHLLGA+GAVEA A +QAIRTGW+HPNINLENPD
Sbjct: 477 KEYQALLHCFGENPELRVNSTKSMIGHLLGASGAVEAAATIQAIRTGWVHPNINLENPDV 536
Query: 537 VVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 576
VDT+VLVGP KERL VKAALSNSFGFGGHNSSIIF+PYK
Sbjct: 537 GVDTSVLVGPNKERLNVKAALSNSFGFGGHNSSIIFAPYK 576
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225444641|ref|XP_002276214.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 883 bits (2282), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/570 (76%), Positives = 486/570 (85%), Gaps = 20/570 (3%)
Query: 9 SPLCTWLVAACMSFTCGSRDPHQPPSVLRRYTNNKREGLSAARRRKLSAKCGVGGEVVNG 68
SPLCTWLVAACMS T + PS+++ R G +RR++ A+C + G
Sbjct: 4 SPLCTWLVAACMSVT-ADNEFAPKPSMVQCSKRLSRWG----KRRRVLAQCS---DFARG 55
Query: 69 SLVSSFSGSSHSIQSLMASCLPFEPCNEYYSS--VSSLGFFGDNGFSSFFGSNNSTATLN 126
+SS SIQ L++SCL FEPC++Y SS + FFGDN SS FGS + LN
Sbjct: 56 GSISS------SIQGLVSSCLAFEPCDQYCSSKGLPYSAFFGDNALSSVFGSK--SLPLN 107
Query: 127 RRQRRLRLNRVTRSGEAMAVAVQPDEEVTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFY 186
RRQRR NR + SGE MAVAVQP +EVTTKKKP +Q+RVVVTGMG++SP+GHEPD FY
Sbjct: 108 RRQRRT--NRGSHSGETMAVAVQPAKEVTTKKKPLTEQRRVVVTGMGVMSPIGHEPDSFY 165
Query: 187 NNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKA 246
NNLLEGVSGISEIE+FDC+ FPT+IA EIKSFSTDGW+APKLSKRMDKFMLY+LTAGKKA
Sbjct: 166 NNLLEGVSGISEIESFDCSHFPTRIAGEIKSFSTDGWIAPKLSKRMDKFMLYMLTAGKKA 225
Query: 247 LADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMG 306
LADGGITEDV +ELDKS+CGVLIGS +GG+KVF DAIEALR+SY+KMNPFCVPFATTNMG
Sbjct: 226 LADGGITEDVTDELDKSRCGVLIGSAMGGIKVFNDAIEALRVSYRKMNPFCVPFATTNMG 285
Query: 307 SAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGF 366
SAMLAMDLGWMGPNYSISTACATSNFCILNA+NHIIRGEA++MLCGGSDAA+IPIGLGGF
Sbjct: 286 SAMLAMDLGWMGPNYSISTACATSNFCILNASNHIIRGEADMMLCGGSDAAIIPIGLGGF 345
Query: 367 VACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSF 426
VACRALSQRNNDPTKASRPWD NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEF GGSF
Sbjct: 346 VACRALSQRNNDPTKASRPWDTNRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFLGGSF 405
Query: 427 TSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCF 486
T DAYHMTEPHPDG GVILCIE ALA SGVSREDVNYINAHATST AGD +EYQAL+ CF
Sbjct: 406 TCDAYHMTEPHPDGAGVILCIESALARSGVSREDVNYINAHATSTLAGDFREYQALVRCF 465
Query: 487 GQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGP 546
GQN L+VNSTKSMIGHLLGAAGAVEAIA +QAIRTGW+HPNINLE+P+ VDT++LVG
Sbjct: 466 GQNPELKVNSTKSMIGHLLGAAGAVEAIATIQAIRTGWVHPNINLESPEEGVDTDLLVGS 525
Query: 547 KKERLEVKAALSNSFGFGGHNSSIIFSPYK 576
KKERL++K ALSNSFGFGGHNSSIIF+PYK
Sbjct: 526 KKERLDIKVALSNSFGFGGHNSSIIFAPYK 555
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|346995771|gb|ABJ90469.2| beta-ketoacyl-ACP synthase II [Jatropha curcas] | Back alignment and taxonomy information |
|---|
Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/594 (75%), Positives = 493/594 (82%), Gaps = 39/594 (6%)
Query: 1 MASSCSFTSPLCTWLVAACMSFTCGSRD---PH-----QPPSVLRRYTNNKREGLSAARR 52
M S SF SPLCTWLVAACMS TC + PH QP + L R+ +R+ L A
Sbjct: 1 MMGSASFASPLCTWLVAACMSVTCAKENRTAPHAFHSSQPSNRLSRWAR-RRKTLHAQYN 59
Query: 53 RKLSAKCGV----------GGEVVNGSLVSSFSGSSHSIQSLMASCLPFEPCNEYYSSVS 102
S E ++ SLVS+ GSS Q LM+SCL FEPC++YYSS
Sbjct: 60 SDSSNSIAAGGGGGGGGGYSTEFLSNSLVSTLCGSS--FQGLMSSCLAFEPCSQYYSS-- 115
Query: 103 SLGFFGDNGFSSFFGSNNSTATLNRRQRRLRLNRVTRSGEAMAVAVQPDEEVTTKKKPHM 162
NG F S N LNR+QRRL NR+ SGEAMA+AVQP++EV TKKKP
Sbjct: 116 -------NGL---FRSRN----LNRKQRRL--NRLALSGEAMAIAVQPEKEVATKKKPAT 159
Query: 163 KQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDG 222
KQ+RVVVTGMG+VSPLGHEPDVFYNNLLEGVSGIS+IE F+C FPT+IA EIKSFSTDG
Sbjct: 160 KQRRVVVTGMGVVSPLGHEPDVFYNNLLEGVSGISQIEAFECAQFPTRIAGEIKSFSTDG 219
Query: 223 WVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDA 282
W+APKLSKRMDKFMLY+LTAGKKALADGGITED+M+ELDK+KCGVLIGS +GGMKVF DA
Sbjct: 220 WIAPKLSKRMDKFMLYMLTAGKKALADGGITEDIMDELDKAKCGVLIGSAMGGMKVFNDA 279
Query: 283 IEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHII 342
IEALR+SY+KMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHII
Sbjct: 280 IEALRVSYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHII 339
Query: 343 RGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 402
RGEA++MLCGGSDAA+IPIGLGGFVACRALSQRN+DP KASRPWD+NRDGFVMGEGAGVL
Sbjct: 340 RGEADIMLCGGSDAAIIPIGLGGFVACRALSQRNDDPAKASRPWDMNRDGFVMGEGAGVL 399
Query: 403 LLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVN 462
LLEELEHAKKRGA IYAEF GGSFT DAYHMTEP P G+GVILC+EKALA SGVSREDVN
Sbjct: 400 LLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPRPGGIGVILCVEKALAQSGVSREDVN 459
Query: 463 YINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRT 522
YINAHATSTPAGDIKE+ AL+HCFGQN GLRVNSTKSMIGHLLGAAGAVEAIA +QAIRT
Sbjct: 460 YINAHATSTPAGDIKEFGALMHCFGQNPGLRVNSTKSMIGHLLGAAGAVEAIAAIQAIRT 519
Query: 523 GWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 576
GW+HPNINLENPD VDTNVLVGPKKERL+VK ALSNSFGFGGHNSSI+F+P+K
Sbjct: 520 GWVHPNINLENPDEGVDTNVLVGPKKERLDVKVALSNSFGFGGHNSSIVFAPHK 573
|
Source: Jatropha curcas Species: Jatropha curcas Genus: Jatropha Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255550355|ref|XP_002516228.1| 46 kDa ketoavyl-ACP synthase [Ricinus communis] gi|223544714|gb|EEF46230.1| 46 kDa ketoavyl-ACP synthase [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/576 (75%), Positives = 477/576 (82%), Gaps = 22/576 (3%)
Query: 1 MASSCSFTSPLCTWLVAACMSFTCGSRDPHQPPSVLRRYTNNKREGLSAARRRKLSAKCG 60
M S S +SPLCTWLVAACMS TC + H + T S RRR K
Sbjct: 1 MMGSASLSSPLCTWLVAACMSVTCSKENRH---AFFSSSTPGTTSSHSRTRRRP---KYN 54
Query: 61 VGGEVVNGSLVSSFSGSSHSIQSLMASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNN 120
+ S +S S S S Q LM+SCL FEPC+ YYSS G F +
Sbjct: 55 SISTPASQSFFNSLSSSGSSFQQLMSSCLAFEPCSHYYSSN---GLFPN----------- 100
Query: 121 STATLNRRQRRLRLNRVTRSGEAMAVAVQPDEEVTTKKKPHMKQKRVVVTGMGLVSPLGH 180
T L +R RL +R+ RSGEAMAVAVQP++EV T KKP MKQ+RVVVTGMG+VSPLGH
Sbjct: 101 -TPLLPKRHPRLH-HRLPRSGEAMAVAVQPEKEVATNKKPLMKQRRVVVTGMGVVSPLGH 158
Query: 181 EPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLL 240
+ DV+YNNLL+G SGIS+I++FDC FPT+IA EIKSFSTDGWVAPKLSKRMDKFMLY+L
Sbjct: 159 DIDVYYNNLLDGSSGISQIDSFDCAQFPTRIAGEIKSFSTDGWVAPKLSKRMDKFMLYML 218
Query: 241 TAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPF 300
TAGKKALADGGITED+M+ELDK++CGVLIGS +GGMKVF DAIEALRISY+KMNPFCVPF
Sbjct: 219 TAGKKALADGGITEDMMDELDKARCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPF 278
Query: 301 ATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIP 360
ATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEA++MLCGGSDAA+IP
Sbjct: 279 ATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEADIMLCGGSDAAIIP 338
Query: 361 IGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAE 420
IGLGGFVACRALSQRN+DPTKASRPWD+NRDGFVMGEGAGVLLLEELEHAKKRGA IYAE
Sbjct: 339 IGLGGFVACRALSQRNDDPTKASRPWDMNRDGFVMGEGAGVLLLEELEHAKKRGANIYAE 398
Query: 421 FRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQ 480
F GGSFT DAYHMTEP PDGVGVILCIEKALA SGVS+E+VNYINAHATSTPAGD+KEY+
Sbjct: 399 FLGGSFTCDAYHMTEPRPDGVGVILCIEKALARSGVSKEEVNYINAHATSTPAGDLKEYE 458
Query: 481 ALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDT 540
AL+ CF QN LRVNSTKSMIGHLLGAAGAVEAIA +QAIRTGW+HPNINLENP+ VDT
Sbjct: 459 ALMRCFSQNPDLRVNSTKSMIGHLLGAAGAVEAIATIQAIRTGWVHPNINLENPEEGVDT 518
Query: 541 NVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 576
VLVGPKKERL++K ALSNSFGFGGHNSSIIF+PYK
Sbjct: 519 KVLVGPKKERLDIKVALSNSFGFGGHNSSIIFAPYK 554
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|210110425|gb|ACJ07142.1| beta-ketoacyl-ACP synthase II-1 [Arachis hypogaea] | Back alignment and taxonomy information |
|---|
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/575 (74%), Positives = 475/575 (82%), Gaps = 30/575 (5%)
Query: 2 ASSCSFTSPLCTWLVAACMSFTCGSRDPHQPPSVLRRYTNNKREGLSAARRRKLSAKCGV 61
+++ S SPLCTWLVAACMS TC + P + LR ++R +L
Sbjct: 4 SAASSMASPLCTWLVAACMSVTCHADRAGTPKAALRSSKRSRRTKALPPNTSQL------ 57
Query: 62 GGEVVNGSLVSSFSGSSHSIQSLMASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNS 121
N L+SS GSS IQ L++S FEPC++Y ++ N FSS F S
Sbjct: 58 -----NMRLISSLYGSS--IQGLISS---FEPCDDYCNT--------HNAFSSLFRST-- 97
Query: 122 TATLNRRQRRLRLNRVTRSGEAMAVAVQPDEEVTTKKKPHMKQKRVVVTGMGLVSPLGHE 181
T NRR RL N++ SG+ MAVAV+P EVTT KKP KQ+RVVVTG+G+V+PLGHE
Sbjct: 98 --TPNRRHTRL--NKLAHSGKTMAVAVEPAHEVTTTKKPPTKQRRVVVTGLGVVTPLGHE 153
Query: 182 PDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLT 241
PDV+YNNLL+GVSGISEIETFDC +PT+IA EIKSFSTDGWVAPKLSKRMDKFMLYLLT
Sbjct: 154 PDVYYNNLLDGVSGISEIETFDCAEYPTRIAGEIKSFSTDGWVAPKLSKRMDKFMLYLLT 213
Query: 242 AGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFA 301
AGKKAL DGGITEDVM+EL+K KCGVLIGS +GGMKVF DAIEALR+SYKKMNPFCVPFA
Sbjct: 214 AGKKALVDGGITEDVMDELNKEKCGVLIGSAMGGMKVFNDAIEALRVSYKKMNPFCVPFA 273
Query: 302 TTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI 361
TTNMGSA+LAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEA+VMLCGGSDAA+IPI
Sbjct: 274 TTNMGSAILAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPI 333
Query: 362 GLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEF 421
GLGGFVACRALSQRN DPTKASRPWDINRDGFVMGEGAGVLLLE+LEHAKKRGA IYAEF
Sbjct: 334 GLGGFVACRALSQRNTDPTKASRPWDINRDGFVMGEGAGVLLLEDLEHAKKRGATIYAEF 393
Query: 422 RGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQA 481
GGSFT DAYH+TEP PDG GVILCIEKALA SGVS+EDVNYINAHATSTPAGD+KE+QA
Sbjct: 394 LGGSFTCDAYHVTEPRPDGAGVILCIEKALAQSGVSKEDVNYINAHATSTPAGDLKEFQA 453
Query: 482 LIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTN 541
L+HCFGQN LRVNSTKSMIGHLLGAAG VEA+A VQAIRTGW+HPNINLENPD VD
Sbjct: 454 LLHCFGQNPELRVNSTKSMIGHLLGAAGGVEAVATVQAIRTGWVHPNINLENPDQGVDAK 513
Query: 542 VLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 576
VLVG KKERL++KAALSNSFGFGGHNSSIIF+PYK
Sbjct: 514 VLVGSKKERLDIKAALSNSFGFGGHNSSIIFAPYK 548
|
Source: Arachis hypogaea Species: Arachis hypogaea Genus: Arachis Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297738522|emb|CBI27767.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/568 (74%), Positives = 460/568 (80%), Gaps = 54/568 (9%)
Query: 9 SPLCTWLVAACMSFTCGSRDPHQPPSVLRRYTNNKREGLSAARRRKLSAKCGVGGEVVNG 68
SPLCTWLVAACMS T + +P V +KR RRR L
Sbjct: 4 SPLCTWLVAACMSVTADNEFAPKPSMV----QCSKRLSRWGKRRRGLP------------ 47
Query: 69 SLVSSFSGSSHSIQSLMASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRR 128
YS+ FFGDN SS FGS + LNRR
Sbjct: 48 -----------------------------YSA-----FFGDNALSSVFGSK--SLPLNRR 71
Query: 129 QRRLRLNRVTRSGEAMAVAVQPDEEVTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNN 188
QRR NR + SGE MAVAVQP +EVTTKKKP +Q+RVVVTGMG++SP+GHEPD FYNN
Sbjct: 72 QRRT--NRGSHSGETMAVAVQPAKEVTTKKKPLTEQRRVVVTGMGVMSPIGHEPDSFYNN 129
Query: 189 LLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALA 248
LLEGVSGISEIE+FDC+ FPT+IA EIKSFSTDGW+APKLSKRMDKFMLY+LTAGKKALA
Sbjct: 130 LLEGVSGISEIESFDCSHFPTRIAGEIKSFSTDGWIAPKLSKRMDKFMLYMLTAGKKALA 189
Query: 249 DGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSA 308
DGGITEDV +ELDKS+CGVLIGS +GG+KVF DAIEALR+SY+KMNPFCVPFATTNMGSA
Sbjct: 190 DGGITEDVTDELDKSRCGVLIGSAMGGIKVFNDAIEALRVSYRKMNPFCVPFATTNMGSA 249
Query: 309 MLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVA 368
MLAMDLGWMGPNYSISTACATSNFCILNA+NHIIRGEA++MLCGGSDAA+IPIGLGGFVA
Sbjct: 250 MLAMDLGWMGPNYSISTACATSNFCILNASNHIIRGEADMMLCGGSDAAIIPIGLGGFVA 309
Query: 369 CRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTS 428
CRALSQRNNDPTKASRPWD NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEF GGSFT
Sbjct: 310 CRALSQRNNDPTKASRPWDTNRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFLGGSFTC 369
Query: 429 DAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQ 488
DAYHMTEPHPDG GVILCIE ALA SGVSREDVNYINAHATST AGD +EYQAL+ CFGQ
Sbjct: 370 DAYHMTEPHPDGAGVILCIESALARSGVSREDVNYINAHATSTLAGDFREYQALVRCFGQ 429
Query: 489 NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKK 548
N L+VNSTKSMIGHLLGAAGAVEAIA +QAIRTGW+HPNINLE+P+ VDT++LVG KK
Sbjct: 430 NPELKVNSTKSMIGHLLGAAGAVEAIATIQAIRTGWVHPNINLESPEEGVDTDLLVGSKK 489
Query: 549 ERLEVKAALSNSFGFGGHNSSIIFSPYK 576
ERL++K ALSNSFGFGGHNSSIIF+PYK
Sbjct: 490 ERLDIKVALSNSFGFGGHNSSIIFAPYK 517
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|3800747|gb|AAC68860.1| 3-ketoacyl-ACP synthase [Cuphea avigera var. pulcherrima] | Back alignment and taxonomy information |
|---|
Score = 842 bits (2176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/574 (75%), Positives = 473/574 (82%), Gaps = 31/574 (5%)
Query: 2 ASSCSFTSPLCTWLVAACMSFTCGSRDPHQPPSVLRRYTNNKREGLSAARRRKLSAKCGV 61
A+S SPLCTWL+AACMS + DP PPS+ R + + SA +
Sbjct: 3 AASSLLASPLCTWLLAACMSTSFHPSDP-LPPSISSPRRRLSRRRILSQCAPLPSASSAL 61
Query: 62 GGEVVNGSLVSSFSGSSHSIQSLMASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNS 121
G SSF H++ + +C FEPC++YY+S +S FGS
Sbjct: 62 RG--------SSF----HTLVTSYLAC--FEPCHDYYTS------------ASLFGSRPI 95
Query: 122 TATLNRRQRRLRLNRVTRSGEAMAVAVQPDEEVTTKKKPHMKQKRVVVTGMGLVSPLGHE 181
T RR RRL NR + S EAMAVA+QP++EVTTKKKP +KQ+RVVVTGMG+V+PLGH+
Sbjct: 96 RTT--RRHRRL--NRASPSREAMAVALQPEQEVTTKKKPSIKQRRVVVTGMGVVTPLGHD 151
Query: 182 PDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLT 241
PDVFYNNLL+G SGISEIETFDC FPT+IA EIKSFSTDGWVAPKLSKRMDKFMLY+LT
Sbjct: 152 PDVFYNNLLDGTSGISEIETFDCAQFPTRIAGEIKSFSTDGWVAPKLSKRMDKFMLYMLT 211
Query: 242 AGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFA 301
AGKKAL DGGITEDVM ELDK KCGVLIGS +GGMKVF DAIEALRISYKKMNPFCVPFA
Sbjct: 212 AGKKALTDGGITEDVMKELDKRKCGVLIGSAMGGMKVFNDAIEALRISYKKMNPFCVPFA 271
Query: 302 TTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI 361
TTNMGSAMLAMDLGWMGPNYSISTACATSNFCI+NAANHIIRGEA+VMLCGGSDA +IPI
Sbjct: 272 TTNMGSAMLAMDLGWMGPNYSISTACATSNFCIMNAANHIIRGEADVMLCGGSDAVIIPI 331
Query: 362 GLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEF 421
G+GGFVACRALSQRN+DPTKASRPWD NRDGFVMGEGAGVLLLEELEHAKKRGA IYAEF
Sbjct: 332 GMGGFVACRALSQRNSDPTKASRPWDSNRDGFVMGEGAGVLLLEELEHAKKRGATIYAEF 391
Query: 422 RGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQA 481
GGSFT DAYHMTEPHPDG GVILCIEKALA SGVSREDVNYINAHATSTPAGDIKEYQA
Sbjct: 392 LGGSFTCDAYHMTEPHPDGAGVILCIEKALAQSGVSREDVNYINAHATSTPAGDIKEYQA 451
Query: 482 LIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTN 541
LIHCFGQNR L+VNSTKSMIGHLLGAAG VEA++VVQAIRTGWIHPNINLENPD VDT
Sbjct: 452 LIHCFGQNRELKVNSTKSMIGHLLGAAGGVEAVSVVQAIRTGWIHPNINLENPDEGVDTK 511
Query: 542 VLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 575
+LVGPKKERL VK LSNSFGFGGHNSSI+F+PY
Sbjct: 512 LLVGPKKERLNVKVGLSNSFGFGGHNSSILFAPY 545
|
Source: Cuphea avigera var. pulcherrima Species: Cuphea avigera Genus: Cuphea Family: Lythraceae Order: Myrtales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|1698690|gb|AAB37271.1| beta-ketoacyl-ACP synthase II [Cuphea wrightii] | Back alignment and taxonomy information |
|---|
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/565 (76%), Positives = 469/565 (83%), Gaps = 38/565 (6%)
Query: 10 PLCTWLVAACMSFTCGSRDPHQPPSVLRRYTNNKREGLSAARRRKLSAKCGVGGEVVNGS 69
P CTWLVA+CMS T DP P ++R+ KR
Sbjct: 11 PFCTWLVASCMS-TSFDNDPRSPS--VKRFPRRKR------------------------- 42
Query: 70 LVSSFSGSSHSIQSLMASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQ 129
V S GS+ Q L+ASC+ +PC++Y SS +SL F GDNGF+S FGS + NR
Sbjct: 43 -VLSQRGST--FQCLVASCI--DPCDQYRSS-ASLSFLGDNGFASLFGSKPFMS--NRGH 94
Query: 130 RRLRLNRVTRSGEAMAVAVQPDEEVTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNL 189
RRLR R + SGEAMAVA+QP +E TKKKP +KQ+RVVVTGMG+V+PLGHEPDVFYNNL
Sbjct: 95 RRLR--RASHSGEAMAVALQPAQEAGTKKKPVIKQRRVVVTGMGVVTPLGHEPDVFYNNL 152
Query: 190 LEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALAD 249
L+GVSGISEIETFDCT FPT+IA EIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALAD
Sbjct: 153 LDGVSGISEIETFDCTQFPTRIAGEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALAD 212
Query: 250 GGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAM 309
GGIT++VM ELDK KCGVLIGSG+GGMKVF DAIEALR+SYKKMNPFCVPFATTNMGSAM
Sbjct: 213 GGITDEVMKELDKRKCGVLIGSGMGGMKVFNDAIEALRVSYKKMNPFCVPFATTNMGSAM 272
Query: 310 LAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVAC 369
LAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEA++MLCGGSDA +IPIGLGGFVAC
Sbjct: 273 LAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEADMMLCGGSDAVIIPIGLGGFVAC 332
Query: 370 RALSQRNNDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSD 429
RALSQRN+DPTKASRPWD NRDGFVMGEGAGVLLLEELEHAKKRGA IYAEF GGSFT D
Sbjct: 333 RALSQRNSDPTKASRPWDSNRDGFVMGEGAGVLLLEELEHAKKRGATIYAEFLGGSFTCD 392
Query: 430 AYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN 489
AYHMTEPHP+G GVILCIEKALA +GVS+EDVNYINAHATST AGDIKEYQAL CFGQN
Sbjct: 393 AYHMTEPHPEGAGVILCIEKALAQAGVSKEDVNYINAHATSTSAGDIKEYQALARCFGQN 452
Query: 490 RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKE 549
LRVNSTKSMIGHLLGAAG VEA+ VVQAIRTGWIHPN+NLE+PD VD +LVGPKKE
Sbjct: 453 SELRVNSTKSMIGHLLGAAGGVEAVTVVQAIRTGWIHPNLNLEDPDKAVDAKLLVGPKKE 512
Query: 550 RLEVKAALSNSFGFGGHNSSIIFSP 574
RL VK LSNSFGFGGHNSSI+F+P
Sbjct: 513 RLNVKVGLSNSFGFGGHNSSILFAP 537
|
Source: Cuphea wrightii Species: Cuphea wrightii Genus: Cuphea Family: Lythraceae Order: Myrtales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|19698877|gb|AAL91174.1| putative 3-ketoacyl-ACP synthase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/576 (72%), Positives = 468/576 (81%), Gaps = 36/576 (6%)
Query: 1 MASSCSFTSPLCTWLVAACMSFTCGSRDPHQPPSVLRRYTNNKREGLSAARRRKLSAKCG 60
+ +S S+ SPLCTW VAACMS + G D Q ++ + +R LS KC
Sbjct: 2 VGASSSYASPLCTWFVAACMSVSHGGGDSRQAVALQSGGRSRRRRQLS---------KCS 52
Query: 61 VGGEVVNGSLVSSFSGSSHSIQSLMASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNN 120
V SGS+ SIQ+L+ SCL F PC Y + +N SS FGSN
Sbjct: 53 VA------------SGSA-SIQALVTSCLDFGPCTHYNN---------NNALSSLFGSN- 89
Query: 121 STATLNRRQRRLRLNRVTRSGEAMAVAVQPDEEVTTKKKPHMKQKRVVVTGMGLVSPLGH 180
+ +LNR QRRL NR SG AMAV ++ ++E KKP +Q+RVVVTGMG+ + LGH
Sbjct: 90 -SVSLNRNQRRL--NRAASSGGAMAV-MEMEKEAAVNKKPPTEQRRVVVTGMGVETSLGH 145
Query: 181 EPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLL 240
+P FY NLL+G SGIS+IE FDC+ FPT+IA EIKSFST+GWVAPKLSKRMDKFMLYLL
Sbjct: 146 DPHTFYENLLQGNSGISQIENFDCSEFPTRIAGEIKSFSTEGWVAPKLSKRMDKFMLYLL 205
Query: 241 TAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPF 300
TAGKKALADGG+T++VM E DK+KCGVLIGS +GGMKVFYDAIEALRISYKKMNPFCVPF
Sbjct: 206 TAGKKALADGGVTDEVMAEFDKTKCGVLIGSAMGGMKVFYDAIEALRISYKKMNPFCVPF 265
Query: 301 ATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIP 360
ATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILN+ANHII+GEA+VMLCGGSDA +IP
Sbjct: 266 ATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNSANHIIKGEADVMLCGGSDAVIIP 325
Query: 361 IGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAE 420
IGLGGFVACRALSQRNNDPTKASRPWD NRDGFVMGEGAGVLLLEELEHAKKRGA IYAE
Sbjct: 326 IGLGGFVACRALSQRNNDPTKASRPWDTNRDGFVMGEGAGVLLLEELEHAKKRGATIYAE 385
Query: 421 FRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQ 480
F GGSFT DAYHMTEPHPDG GVILCIE+ALA +G+S+E +NYINAHATST AGDIKEYQ
Sbjct: 386 FLGGSFTCDAYHMTEPHPDGAGVILCIERALASAGISKEQINYINAHATSTHAGDIKEYQ 445
Query: 481 ALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDT 540
AL HCFGQN L+VNSTKSMIGHLLG AGAVEA+A VQAIRTGW+HPNINLENPD+ VDT
Sbjct: 446 ALAHCFGQNPELKVNSTKSMIGHLLGVAGAVEAVATVQAIRTGWVHPNINLENPDSGVDT 505
Query: 541 NVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 576
+LVGPKKERL++KAALSNSFGFGGHNSSIIF+PYK
Sbjct: 506 KLLVGPKKERLDIKAALSNSFGFGGHNSSIIFAPYK 541
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297742964|emb|CBI35831.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/584 (73%), Positives = 474/584 (81%), Gaps = 46/584 (7%)
Query: 1 MASSCSFTSPLCTWLVAACMSFTCGSRDP-----HQPPSVLRRYTNNKREGLSAARRRKL 55
MA+S S SPLCTWLVAACMS C P Q P L R
Sbjct: 1 MAAS-SVASPLCTWLVAACMSVACEKDHPLKSSMFQTPKRLSR----------------- 42
Query: 56 SAKCGVGGEVVNGSLVSSFSGSSHSIQSLMASCLPFEPCNEYYSSVSSL---GFFGDNGF 112
+SSF GSS I +LM+SCL FEPC Y SS FFGDNGF
Sbjct: 43 -------------GWISSFYGSS--IHNLMSSCLAFEPCEAYSSSKGLSSSLAFFGDNGF 87
Query: 113 SSFFGSNNSTATLNRRQRRLRLNRVTRSGEAMAVAVQPDEEVTTKKKPHMKQKRVVVTGM 172
S FGS S +N RQR R+NR S + MAVAV+P EVT KKKP KQ+RVVVTGM
Sbjct: 88 -SLFGSKPS--PMNHRQR--RMNRAAHSDKNMAVAVKPAAEVTAKKKPLTKQRRVVVTGM 142
Query: 173 GLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRM 232
G+V+P+GH+ DVFYNNLLEGVSGISEIE FDC FPT+IA EIKSFSTDGWVAPKLSKR
Sbjct: 143 GVVTPVGHDLDVFYNNLLEGVSGISEIEAFDCAQFPTRIAGEIKSFSTDGWVAPKLSKRA 202
Query: 233 DKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKK 292
DKFMLY+LTAGKKALADGG+TEDVM+ELDK++CGVLIGS +GGMKVF DAIEALRISY+K
Sbjct: 203 DKFMLYMLTAGKKALADGGVTEDVMSELDKARCGVLIGSAMGGMKVFNDAIEALRISYRK 262
Query: 293 MNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCG 352
MNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGE ++MLCG
Sbjct: 263 MNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGETDMMLCG 322
Query: 353 GSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKK 412
GSDAA+IPIGLGGFVACRALSQRN+DP KASRPWDINRDGFVMGEGAGVLLLEELEHAK+
Sbjct: 323 GSDAAIIPIGLGGFVACRALSQRNSDPAKASRPWDINRDGFVMGEGAGVLLLEELEHAKR 382
Query: 413 RGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTP 472
RGA IYAEF GGSFT DAYHMTEPHP+G GV+LCIEKALA +GV+REDVNYINAHATSTP
Sbjct: 383 RGANIYAEFLGGSFTCDAYHMTEPHPEGTGVVLCIEKALAQAGVAREDVNYINAHATSTP 442
Query: 473 AGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLE 532
+GD+KE+QALI CFGQN LRVNSTKSMIGHLLGA+GAVEA+A V+AI+TGW+HPNINLE
Sbjct: 443 SGDLKEFQALIRCFGQNPKLRVNSTKSMIGHLLGASGAVEAVATVKAIQTGWVHPNINLE 502
Query: 533 NPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 576
NPD VDTN+LVG KKERL++K ALSNSFGFGGHNSSI+F+PYK
Sbjct: 503 NPDQGVDTNLLVGSKKERLDIKVALSNSFGFGGHNSSILFAPYK 546
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 576 | ||||||
| TAIR|locus:2027252 | 541 | FAB1 "fatty acid biosynthesis | 0.756 | 0.805 | 0.741 | 2.3e-185 | |
| UNIPROTKB|Q9KQH9 | 414 | fabF "3-oxoacyl-[acyl-carrier- | 0.673 | 0.937 | 0.411 | 1.5e-74 | |
| TIGR_CMR|VC_2019 | 414 | VC_2019 "3-oxoacyl-(acyl-carri | 0.673 | 0.937 | 0.411 | 1.5e-74 | |
| TIGR_CMR|CBU_0497 | 414 | CBU_0497 "3-oxoacyl-acyl carri | 0.668 | 0.929 | 0.415 | 3.1e-74 | |
| UNIPROTKB|P0AAI5 | 413 | fabF "FabF" [Escherichia coli | 0.651 | 0.907 | 0.415 | 4.1e-72 | |
| TIGR_CMR|GSU_1605 | 410 | GSU_1605 "3-oxoacyl-(acyl-carr | 0.663 | 0.931 | 0.403 | 6.1e-71 | |
| TIGR_CMR|CHY_1445 | 412 | CHY_1445 "3-oxoacyl-(acyl-carr | 0.675 | 0.944 | 0.387 | 9.9e-71 | |
| TIGR_CMR|SO_2774 | 412 | SO_2774 "3-oxoacyl-(acyl-carri | 0.651 | 0.910 | 0.405 | 1.6e-70 | |
| TIGR_CMR|CPS_2299 | 412 | CPS_2299 "3-oxoacyl-[acyl-carr | 0.675 | 0.944 | 0.387 | 4.9e-69 | |
| TIGR_CMR|ECH_0882 | 422 | ECH_0882 "3-oxoacyl-(acyl-carr | 0.638 | 0.872 | 0.391 | 2.4e-67 |
| TAIR|locus:2027252 FAB1 "fatty acid biosynthesis 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1716 (609.1 bits), Expect = 2.3e-185, Sum P(2) = 2.3e-185
Identities = 324/437 (74%), Positives = 358/437 (81%)
Query: 140 SGEAMAVAVQPDEEVTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEI 199
SG AMAV ++ ++E KKP +Q+RVVVTGMG+ + LGH+P FY NLL+G SGIS+I
Sbjct: 106 SGGAMAV-MEMEKEAAVNKKPPTEQRRVVVTGMGVETSLGHDPHTFYENLLQGNSGISQI 164
Query: 200 ETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNE 259
E FDC+ FPT+IA EIKSFST+GWVAPKLSKRMDKFMLYLLTAGKKALADGG+T++VM E
Sbjct: 165 ENFDCSEFPTRIAGEIKSFSTEGWVAPKLSKRMDKFMLYLLTAGKKALADGGVTDEVMAE 224
Query: 260 LDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGP 319
DK+KCGVLIGS +GGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGP
Sbjct: 225 FDKTKCGVLIGSAMGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGP 284
Query: 320 NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDP 379
NYSISTACATSNFCILN+ANHII+GEA+VMLCGGSDA +IPIGLGGFVACRALSQRNNDP
Sbjct: 285 NYSISTACATSNFCILNSANHIIKGEADVMLCGGSDAVIIPIGLGGFVACRALSQRNNDP 344
Query: 380 TKASRPWDINRDGFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD 439
TKASRPWD NRDGFVM HAKKRGA IYAEF GGSFT DAYHMTEPHPD
Sbjct: 345 TKASRPWDTNRDGFVMGEGAGVLLLEELEHAKKRGATIYAEFLGGSFTCDAYHMTEPHPD 404
Query: 440 GVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKS 499
G GVILCIE+ALA +G+S+E +NYINAHATST AGDIKEYQAL HCFGQN L+VNSTKS
Sbjct: 405 GAGVILCIERALASAGISKEQINYINAHATSTHAGDIKEYQALAHCFGQNPELKVNSTKS 464
Query: 500 MIGHLLXXXXXXXXXXXXXXXRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALXX 559
MIGHLL RTGW+HPNINLENPD+ VDT +LVGPKKERL++KAAL
Sbjct: 465 MIGHLLGAAGAVEAVATVQAIRTGWVHPNINLENPDSGVDTKLLVGPKKERLDIKAALSN 524
Query: 560 XXXXXXXXXXXXXXPYK 576
PYK
Sbjct: 525 SFGFGGHNSSIIFAPYK 541
|
|
| UNIPROTKB|Q9KQH9 fabF "3-oxoacyl-[acyl-carrier-protein] synthase 2" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
|---|
Score = 752 (269.8 bits), Expect = 1.5e-74, P = 1.5e-74
Identities = 163/396 (41%), Positives = 236/396 (59%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 221
M ++RVVVTGMG++SP+G+ + + LL G SGI IE FD T+F T+ A +K F +
Sbjct: 1 MSKRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKGFDCE 60
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 281
+++ K +++MD F+ Y + AG +AL D G+ +NE + ++ GV IGSG+GG+++
Sbjct: 61 QYMSKKDARKMDLFIQYGIAAGIQALEDSGLE---VNEENAARIGVAIGSGIGGLELIET 117
Query: 282 AIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 340
+AL +K++PF VP NM + L++ G GPN +ISTAC T I +AA
Sbjct: 118 GHQALIEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARM 177
Query: 341 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXX 400
I G+A+ M+ GG++ A P+G+ GF A +ALS RN++P KASRPWD +RDGFV+
Sbjct: 178 IAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGDGAG 237
Query: 401 XXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 460
HAK RGAKIYAE G + DAYHMT P DG G L +E A+ +GV+ E
Sbjct: 238 IMVLEEYEHAKARGAKIYAEVVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQ 297
Query: 461 VNYINAHATSTPAGDIKEYQALIHCFGQ--NRGLRVNSTKSMIGHLLXXXXXXXXXXXXX 518
+ Y+NAH TSTPAGD+ E + + G+ + + V+STKSM GHLL
Sbjct: 298 IGYVNAHGTSTPAGDVAEVKGIKRALGEAGTKQVLVSSTKSMTGHLLGAAGSVEAIITVM 357
Query: 519 XXRTGWIHPNINLENPDAVVDTNVL--VGPKKERLE 552
+ P INL+NP+ + +++ V K E +E
Sbjct: 358 SLVDQMVPPTINLDNPEEGLGVDLVPHVARKVESME 393
|
|
| TIGR_CMR|VC_2019 VC_2019 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Vibrio cholerae O1 biovar El Tor (taxid:686)] | Back alignment and assigned GO terms |
|---|
Score = 752 (269.8 bits), Expect = 1.5e-74, P = 1.5e-74
Identities = 163/396 (41%), Positives = 236/396 (59%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 221
M ++RVVVTGMG++SP+G+ + + LL G SGI IE FD T+F T+ A +K F +
Sbjct: 1 MSKRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKGFDCE 60
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 281
+++ K +++MD F+ Y + AG +AL D G+ +NE + ++ GV IGSG+GG+++
Sbjct: 61 QYMSKKDARKMDLFIQYGIAAGIQALEDSGLE---VNEENAARIGVAIGSGIGGLELIET 117
Query: 282 AIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 340
+AL +K++PF VP NM + L++ G GPN +ISTAC T I +AA
Sbjct: 118 GHQALIEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARM 177
Query: 341 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXX 400
I G+A+ M+ GG++ A P+G+ GF A +ALS RN++P KASRPWD +RDGFV+
Sbjct: 178 IAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGDGAG 237
Query: 401 XXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 460
HAK RGAKIYAE G + DAYHMT P DG G L +E A+ +GV+ E
Sbjct: 238 IMVLEEYEHAKARGAKIYAEVVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQ 297
Query: 461 VNYINAHATSTPAGDIKEYQALIHCFGQ--NRGLRVNSTKSMIGHLLXXXXXXXXXXXXX 518
+ Y+NAH TSTPAGD+ E + + G+ + + V+STKSM GHLL
Sbjct: 298 IGYVNAHGTSTPAGDVAEVKGIKRALGEAGTKQVLVSSTKSMTGHLLGAAGSVEAIITVM 357
Query: 519 XXRTGWIHPNINLENPDAVVDTNVL--VGPKKERLE 552
+ P INL+NP+ + +++ V K E +E
Sbjct: 358 SLVDQMVPPTINLDNPEEGLGVDLVPHVARKVESME 393
|
|
| TIGR_CMR|CBU_0497 CBU_0497 "3-oxoacyl-acyl carrier protein synthase II" [Coxiella burnetii RSA 493 (taxid:227377)] | Back alignment and assigned GO terms |
|---|
Score = 749 (268.7 bits), Expect = 3.1e-74, P = 3.1e-74
Identities = 162/390 (41%), Positives = 226/390 (57%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 221
M+++RVV+TG+G+VSPLG++ + LL G SG+ I FD +SFPT+IAAE++ F
Sbjct: 1 MEKRRVVITGLGVVSPLGNKVSDMWQALLAGKSGVKPITRFDASSFPTQIAAEVRDFDPA 60
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 281
+ K ++ D F+ + + + ++A D G+ +NE + + GV IGSG+GGM
Sbjct: 61 LVLDLKSIRKTDVFVQFAMESARQAWEDSGLE---INETNAPRVGVAIGSGIGGMPWIEK 117
Query: 282 AIEALRISY-KKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 340
+AL S +K++PF +P A NM S M+++ GPN SI TAC T I +AA
Sbjct: 118 NYDALLTSGPRKISPFFIPGAIINMASGMVSIKYDLKGPNISIVTACTTGLHNIGHAARM 177
Query: 341 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXX 400
I +A+ M+ GG++ A P+G+GGF A RALS RN++P KASRPWD RDGFV+
Sbjct: 178 IAHNDADAMIAGGTEMASTPLGIGGFAAVRALSTRNDEPEKASRPWDKGRDGFVLGEGAA 237
Query: 401 XXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 460
HAKKR A IYAE G + DAYHMT P P+ G C++ +L +G++ E
Sbjct: 238 CVVVEELEHAKKRNATIYAEIIGFGMSGDAYHMTRPDPEAEGFTTCMKNSLRDAGIAPER 297
Query: 461 VNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLXXXXXXXXXXXXXX 519
V+YINAH TSTPA D E +A+ FG + L V+STKSM GH+L
Sbjct: 298 VDYINAHGTSTPAADPLEARAIKKTFGDHAYKLAVSSTKSMTGHMLGAAGALETVISVLA 357
Query: 520 XRTGWIHPNINLENPDAVVDTNVLVGPKKE 549
R P INLENPD D + + +E
Sbjct: 358 IRDNTAPPTINLENPDEGCDLDFVPNEARE 387
|
|
| UNIPROTKB|P0AAI5 fabF "FabF" [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 729 (261.7 bits), Expect = 4.1e-72, P = 4.1e-72
Identities = 158/380 (41%), Positives = 224/380 (58%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 221
M ++RVVVTG+G++SP+G+ + + LL G SGIS I+ FD +++ TK A +K F+ +
Sbjct: 1 MSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCE 60
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 281
++ K ++MD F+ Y + AG +A+ D G+ + E + ++ G IGSG+GG+ + +
Sbjct: 61 DIISRKEQRKMDAFIQYGIVAGVQAMQDSGLE---ITEENATRIGAAIGSGIGGLGLIEE 117
Query: 282 AIEALRISY-KKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 340
+L +K++PF VP NM + L + G GP+ SI+TAC + I +AA
Sbjct: 118 NHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHAARI 177
Query: 341 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXX 400
I G+A+VM+ GG++ A P+G+GGF A RALS RN++P ASRPWD RDGFV+
Sbjct: 178 IAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAG 237
Query: 401 XXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 460
HAKKRGAKIYAE G +SDAYHMT P +G G L + AL +G+
Sbjct: 238 MLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQ 297
Query: 461 VNYINAHATSTPAGDIKEYQALIHCFGQNRG-LRVNSTKSMIGHLLXXXXXXXXXXXXXX 519
+ Y+NAH TSTPAGD E QA+ FG+ + V+STKSM GHLL
Sbjct: 298 IGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILA 357
Query: 520 XRTGWIHPNINLENPDAVVD 539
R + P INL+NPD D
Sbjct: 358 LRDQAVPPTINLDNPDEGCD 377
|
|
| TIGR_CMR|GSU_1605 GSU_1605 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 718 (257.8 bits), Expect = 6.1e-71, P = 6.1e-71
Identities = 157/389 (40%), Positives = 220/389 (56%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 224
+RVVVTG+G VSPLG ++ L+ G SGI I FD + P +IA E+K F + ++
Sbjct: 2 RRVVVTGVGAVSPLGVGNAANWDALVSGTSGIGHITRFDASDLPVRIAGEVKGFDPEQYI 61
Query: 225 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVF--YDA 282
K K+MD F+ Y + A A+ D G+ + E + + GVL+G+GLGG+ Y A
Sbjct: 62 DKKEVKKMDLFIQYAMAAAHYAMEDSGLQ---ITEENAERTGVLVGAGLGGLPTIEKYHA 118
Query: 283 IEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHII 342
L +KK++PF +P N+ +++ G GPN S +ACAT I +A + I
Sbjct: 119 A-MLEGGHKKISPFFIPMLIINLAPGHISIKYGAKGPNLSSVSACATGTHSIGDAYHMIK 177
Query: 343 RGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXX 402
RG+A+ M+ GG+++ V P+G+GGF +ALS RN+DPT ASRP++ NRDGFV+
Sbjct: 178 RGDADAMIAGGTESTVTPLGIGGFAVMKALSTRNDDPTAASRPFEKNRDGFVLAEGAGIV 237
Query: 403 XXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVN 462
AKKRGAKIYAE G T DAYH+T P P+G G C++ AL ++GV E+V+
Sbjct: 238 VLEEYEAAKKRGAKIYAEIVGYGLTGDAYHLTAPAPEGEGAARCMKMALNNAGVRPEEVD 297
Query: 463 YINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLXXXXXXXXXXXXXXXR 521
YINAH TSTP D E A+ FG + + V+STKSM GHLL
Sbjct: 298 YINAHGTSTPFNDYYETLAVKSVFGDYAKKVMVSSTKSMTGHLLGAAGGVEAVFTLMAMD 357
Query: 522 TGWIHPNINLENPDAVVDTNVLVGPKKER 550
G I P IN + D D + + +E+
Sbjct: 358 KGVIPPTINYQEQDPECDLDYVPNAAREK 386
|
|
| TIGR_CMR|CHY_1445 CHY_1445 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
Score = 716 (257.1 bits), Expect = 9.9e-71, P = 9.9e-71
Identities = 153/395 (38%), Positives = 230/395 (58%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 224
KRVVVTG+GL+SPLG ++NL++GVSG+ E+ +FD T F T+IAAE++ F ++
Sbjct: 2 KRVVVTGLGLISPLGIGIKENWDNLMKGVSGVREVSSFDTTGFATRIAAEVRDFDPLKFI 61
Query: 225 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIE 284
K ++RMD+F + + A K A+ D G+ +++++ + G+ IGSG+GG+K +
Sbjct: 62 DKKEARRMDRFTQFAVAATKLAIEDAGLE---LSKINPERAGIFIGSGIGGIKTLEEQAA 118
Query: 285 ALRISYK-KMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIR 343
LR +++PF VP NM +A+ G GPN +I +ACA+ + +A + R
Sbjct: 119 ILREKGPDRVSPFFVPMMIANMAGGQIAITFGLTGPNETIVSACASGANAVGDAFRCLQR 178
Query: 344 GEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXXXX 403
GE +V + GG++AA+ P+ GF + +A+S RN++P KASRP+D +RDGFVM
Sbjct: 179 GEVDVAIAGGAEAAITPLSFAGFCSMKAMSTRNDEPEKASRPFDKDRDGFVMGEGAGILI 238
Query: 404 XXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNY 463
HA RGA+IY E G TSDAYH+T P P+G G +E AL + ++ ED++Y
Sbjct: 239 LETLEHALARGARIYGEIVGYGVTSDAYHITAPDPEGKGAARAMELALKDARLNPEDIDY 298
Query: 464 INAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLXXXXXXXXXXXXXXXRT 522
INAH TSTP D E A+ FG + L V+STKSM GHLL
Sbjct: 299 INAHGTSTPLNDKVETLAIKKVFGDHAYKLMVSSTKSMTGHLLGAAGGIETIYSILAVFF 358
Query: 523 GWIHPNINLENPDAVVDTNVLVGPKKERLEVKAAL 557
+ P +N + P+ +D + + ++ + VKAAL
Sbjct: 359 NQVPPTLNCDEPEEGLDLDYVPNTGRDTV-VKAAL 392
|
|
| TIGR_CMR|SO_2774 SO_2774 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 714 (256.4 bits), Expect = 1.6e-70, P = 1.6e-70
Identities = 154/380 (40%), Positives = 218/380 (57%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 221
M ++RVVVTG+GLV+P+G+ D + LL G SGI+ I FD + F T+ + +K F +
Sbjct: 1 MSKRRVVVTGLGLVTPVGNTVDTTWKALLSGKSGIAPITKFDASEFTTRFSGSVKDFDVE 60
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 281
++ K +++MD F+ Y + AG +A+ D G+ M++++ + G IG+G+GGM +
Sbjct: 61 QYLTKKDARKMDLFIQYGMAAGIQAIQDSGLD---MSKVNPGRVGTAIGAGMGGMWLIEQ 117
Query: 282 AIEALRISY-KKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 340
AL +K++PF VP NM + L++ G GPN++++TAC T I AA
Sbjct: 118 NHSALMNGGPRKISPFFVPSTIINMIAGHLSIMYGMTGPNFAVTTACTTGVHNIGFAART 177
Query: 341 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXX 400
I G+A+VM+ GG++ P+G+GGF A +ALS RN+DPT ASRPWD +RDGFV+
Sbjct: 178 IAYGDADVMVAGGAEDVTCPLGVGGFGAAKALSTRNDDPTAASRPWDKDRDGFVIGDGAG 237
Query: 401 XXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 460
HAK RGA IY E G + DA+HMT P DG G + A+ + + E
Sbjct: 238 VMVMEEYEHAKARGATIYGELVGFGMSGDAFHMTSPPSDGAGAAAAMVNAVNDAKLPLEK 297
Query: 461 VNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLXXXXXXXXXXXXXX 519
+ YINAH TSTPAGD E A+ FG + L V+STKSM GHLL
Sbjct: 298 IGYINAHGTSTPAGDKAEAAAVKSVFGDHAYNLLVSSTKSMTGHLLGAAGAVEAIFTLLA 357
Query: 520 XRTGWIHPNINLENPDAVVD 539
R + P INL+NPD D
Sbjct: 358 LRDQAVPPTINLDNPDEGCD 377
|
|
| TIGR_CMR|CPS_2299 CPS_2299 "3-oxoacyl-[acyl-carrier-protein] synthase II" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 700 (251.5 bits), Expect = 4.9e-69, P = 4.9e-69
Identities = 154/397 (38%), Positives = 225/397 (56%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 224
+RVVVTG+G++SPL + + + NLL G SGI I+ FD T +PTK A +K F ++
Sbjct: 2 RRVVVTGIGMLSPLANTAEETWQNLLLGKSGIGNIDHFDTTDYPTKFAGLVKDFDAQNYM 61
Query: 225 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVF---YD 281
K +K+MD F+ Y + AG +A D G+ + E + + GV IGSG+GG+ + ++
Sbjct: 62 ERKEAKKMDLFIQYGIAAGVQAFKDSGLE---VTEQNAPRIGVAIGSGIGGLGLIEQNHN 118
Query: 282 AIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHI 341
+ + +K++PF VP NM + L++ G GPN +I+TAC + I +AA I
Sbjct: 119 KLIKAEGNPRKLSPFFVPSTIINMIAGHLSIMFGLQGPNIAITTACTSGVHNIGHAARMI 178
Query: 342 IRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMXXXXXX 401
G+A+ ++ GG++ A +G+GGF A RALS+RN+DP ASRPWD +RDGFV+
Sbjct: 179 AYGDADAVVAGGAEKASTTLGMGGFGAARALSRRNDDPEAASRPWDKDRDGFVLGDGAGV 238
Query: 402 XXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDV 461
HAK RGAKIYAE G + DAYHMT P +G G ++ A+ + V +
Sbjct: 239 IVVEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPPENGDGAARAMQNAINDAKVDISRI 298
Query: 462 NYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLXXXXXXXXXXXXXXX 520
YINAH TST AGD+ E A+ FG + + + STKSM GHLL
Sbjct: 299 GYINAHGTSTQAGDMAETNAVKTVFGAGAKNVMMGSTKSMTGHLLGAAGAIEAIFSIQAL 358
Query: 521 RTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAAL 557
+ P INL+NPD D + + G ++ +E++ L
Sbjct: 359 VNKQVPPTINLDNPDEGCDLDYIAGAARD-VELEYVL 394
|
|
| TIGR_CMR|ECH_0882 ECH_0882 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Ehrlichia chaffeensis str. Arkansas (taxid:205920)] | Back alignment and assigned GO terms |
|---|
Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
Identities = 149/381 (39%), Positives = 225/381 (59%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKS---- 217
M +KRVV+TG+GLV+ LG + +++L +G+SGI +I+ FD + K+A ++ +
Sbjct: 1 MAKKRVVITGLGLVTSLGSDLKTVWDSLSKGISGIRKIDRFDTSDLDCKVAGQVTTKPES 60
Query: 218 ----FSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGL 273
F ++ K K+MD F+ + + + +A+ D + + +LD S+ GV++GSG+
Sbjct: 61 EEYIFDAGDYIPEKDLKKMDTFIHFGIASATQAINDSNLLD--YKDLDYSRVGVIVGSGI 118
Query: 274 GGMKVFYDAIEALRI-SYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNF 332
GG++ + L+ K+++PF +P + N+ S ++M G+ G N ++ TAC+T
Sbjct: 119 GGLQFIEKTVICLKERGPKRISPFFIPASLINLTSGHISMKYGFTGLNDAVVTACSTGAQ 178
Query: 333 CILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNND-PTKASRPWDINRD 391
I NAA I GEA+V++ GG+++A+ IG+ GF A +ALS + ND P ASRPWD RD
Sbjct: 179 AIGNAARVIQSGEADVIIAGGTESAICRIGIAGFAAMKALSTKFNDTPELASRPWDKQRD 238
Query: 392 GFVMXXXXXXXXXXXXXHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKAL 451
GFVM HAKKRGA+IY E G TSDAYHM+ PHP+G G I IE AL
Sbjct: 239 GFVMGEGSGVVILEDYEHAKKRGARIYGELLGYGMTSDAYHMSAPHPEGKGGIKSIELAL 298
Query: 452 AHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLXXXXX 510
+++ ++ E +NYINAH TSTP GD E QA+ + F ++ + ++STKS IGHLL
Sbjct: 299 SNAQLNPESINYINAHGTSTPIGDSIEIQAIKNVFKESVYKVPISSTKSSIGHLLGAAGS 358
Query: 511 XXXXXXXXXXRTGWIHPNINL 531
TG P +NL
Sbjct: 359 VEAIFCILAMNTGIAPPTLNL 379
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9C9P4 | KASC2_ARATH | 2, ., 3, ., 1, ., 4, 1 | 0.7256 | 0.9375 | 0.9981 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.3.1 | 0.921 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | fgenesh2_kg.2__1765__AT1G74960.1 | annotation not avaliable (543 aa) | |||||||||
(Arabidopsis lyrata) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | fgenesh2_kg.4__990__AT2G30200.1 | annotation not avaliable (367 aa) | • | • | • | • | • | • | 0.955 | ||
 | fgenesh2_kg.2__215__AT1G62640.1 | annotation not avaliable (404 aa) | • | • | • | • | • | 0.945 | |||
 | fgenesh2_kg.6__977__AT5G10160.1 | annotation not avaliable (219 aa) | • | • | • | • | 0.777 | ||||
 | fgenesh2_kg.4__146__AT2G22230.1 | annotation not avaliable (224 aa) | • | • | • | • | 0.748 | ||||
 | fgenesh1_pm.C_scaffold_8000016 | annotation not avaliable (97 aa) | • | • | • | 0.703 | |||||
 | scaffold_303363.1 | annotation not avaliable (390 aa) | • | • | • | 0.664 | |||||
 | scaffold_200993.1 | annotation not avaliable (126 aa) | • | • | 0.578 | ||||||
 | scaffold_703504.1 | annotation not avaliable (127 aa) | • | • | • | 0.573 | |||||
 | fgenesh2_kg.7__3034__AT5G35360.1 | annotation not avaliable (537 aa) | • | • | • | 0.550 | |||||
 | fgenesh2_kg.4__2654__AT2G44620.1 | annotation not avaliable (122 aa) | • | • | • | 0.544 | |||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 576 | |||
| PLN02787 | 540 | PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protei | 0.0 | |
| cd00834 | 406 | cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier prot | 0.0 | |
| TIGR03150 | 407 | TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protei | 0.0 | |
| PRK07314 | 411 | PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protei | 0.0 | |
| PRK06333 | 424 | PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protei | 0.0 | |
| COG0304 | 412 | COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) sy | 1e-164 | |
| PTZ00050 | 421 | PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein | 1e-132 | |
| PRK08439 | 406 | PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protei | 1e-122 | |
| PRK08722 | 414 | PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protei | 1e-122 | |
| PLN02836 | 437 | PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protei | 1e-121 | |
| PRK07967 | 406 | PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protei | 3e-92 | |
| PRK06501 | 425 | PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protei | 1e-88 | |
| PRK07910 | 418 | PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protei | 6e-88 | |
| cd00828 | 407 | cd00828, elong_cond_enzymes, "elongating" condensi | 4e-79 | |
| PRK09116 | 405 | PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protei | 3e-77 | |
| PRK14691 | 342 | PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protei | 3e-74 | |
| PRK07103 | 410 | PRK07103, PRK07103, polyketide beta-ketoacyl:acyl | 7e-67 | |
| cd00833 | 421 | cd00833, PKS, polyketide synthases (PKSs) polymeri | 1e-63 | |
| pfam00109 | 243 | pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, | 8e-61 | |
| PRK05952 | 381 | PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protei | 4e-58 | |
| PRK09185 | 392 | PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protei | 3e-55 | |
| cd00825 | 332 | cd00825, decarbox_cond_enzymes, decarboxylating co | 2e-51 | |
| cd00832 | 399 | cd00832, CLF, Chain-length factor (CLF) is a facto | 5e-47 | |
| pfam02801 | 119 | pfam02801, Ketoacyl-synt_C, Beta-ketoacyl synthase | 2e-41 | |
| COG3321 | 1061 | COG3321, COG3321, Polyketide synthase modules and | 2e-39 | |
| cd00327 | 254 | cd00327, cond_enzymes, Condensing enzymes; Family | 1e-31 | |
| TIGR02813 | 2582 | TIGR02813, omega_3_PfaA, polyketide-type polyunsat | 3e-25 | |
| smart00825 | 298 | smart00825, PKS_KS, Beta-ketoacyl synthase | 4e-21 | |
| cd00829 | 375 | cd00829, SCP-x_thiolase, Thiolase domain associate | 7e-06 | |
| PRK06519 | 398 | PRK06519, PRK06519, 3-oxoacyl-(acyl carrier protei | 4e-05 | |
| PRK08963 | 428 | PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed | 2e-04 | |
| cd00751 | 386 | cd00751, thiolase, Thiolase are ubiquitous enzymes | 0.003 | |
| PRK09052 | 399 | PRK09052, PRK09052, acetyl-CoA acetyltransferase; | 0.003 |
| >gnl|CDD|215421 PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protein] synthase II | Back alignment and domain information |
|---|
Score = 955 bits (2469), Expect = 0.0
Identities = 439/573 (76%), Positives = 472/573 (82%), Gaps = 35/573 (6%)
Query: 4 SCSFTSPLCTWLVAACMSFTCGSRDPHQPPSVLRRYTNNKREGLSAARRRKLSAKCGVGG 63
S S SPLCTWLVAACMS +C D HQ ++ + G + RRRK G
Sbjct: 3 SASAASPLCTWLVAACMSVSCAGEDAHQAVAL--------QSGGRSRRRRKRRKCSSASG 54
Query: 64 EVVNGSLVSSFSGSSHSIQSLMASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTA 123
CL F PC Y SS G N SS FGSN+ +
Sbjct: 55 SASILVTS----------------CLAFGPCTHYNSS-------GGNALSSLFGSNSVS- 90
Query: 124 TLNRRQRRLRLNRVTRSGEAMAVAVQPDEEVTTKKKPHMKQKRVVVTGMGLVSPLGHEPD 183
LNR QRR NR RSG+AMAVAVQP++EV TKKKP KQ+RVVVTGMG+VSPLGH+PD
Sbjct: 91 -LNRNQRRR--NRAARSGKAMAVAVQPEKEVETKKKPLTKQRRVVVTGMGVVSPLGHDPD 147
Query: 184 VFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 243
VFYNNLLEGVSGISEIE FDC+ FPT+IA EIKSFSTDGWVAPKLSKRMDKFMLYLLTAG
Sbjct: 148 VFYNNLLEGVSGISEIERFDCSQFPTRIAGEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 207
Query: 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATT 303
KKALADGGITEDVM ELDK+KCGVLIGS +GGMKVF DAIEALRISY+KMNPFCVPFATT
Sbjct: 208 KKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATT 267
Query: 304 NMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGL 363
NMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEA+VMLCGGSDAA+IPIGL
Sbjct: 268 NMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGL 327
Query: 364 GGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRG 423
GGFVACRALSQRN+DPTKASRPWD+NRDGFVMGEGAGVLLLEELEHAKKRGA IYAEF G
Sbjct: 328 GGFVACRALSQRNDDPTKASRPWDMNRDGFVMGEGAGVLLLEELEHAKKRGANIYAEFLG 387
Query: 424 GSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALI 483
GSFT DAYHMTEPHP+G GVILCIEKALA SGVS+EDVNYINAHATST AGD+KEYQAL+
Sbjct: 388 GSFTCDAYHMTEPHPEGAGVILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQALM 447
Query: 484 HCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVL 543
CFGQN LRVNSTKSMIGHLLGAAGAVEAIA VQAIRTGW+HPNINLENP++ VDT VL
Sbjct: 448 RCFGQNPELRVNSTKSMIGHLLGAAGAVEAIATVQAIRTGWVHPNINLENPESGVDTKVL 507
Query: 544 VGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 576
VGPKKERL++K ALSNSFGFGGHNSSI+F+PYK
Sbjct: 508 VGPKKERLDIKVALSNSFGFGGHNSSILFAPYK 540
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Length = 540 |
| >gnl|CDD|238430 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Score = 569 bits (1469), Expect = 0.0
Identities = 206/410 (50%), Positives = 279/410 (68%), Gaps = 6/410 (1%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 224
+RVV+TG+G V+PLG+ + F+ LL G SGI I FD + FP++IA E+ F + ++
Sbjct: 1 RRVVITGLGAVTPLGNGVEEFWEALLAGRSGIRPITRFDASGFPSRIAGEVPDFDPEDYL 60
Query: 225 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIE 284
K +RMD+F + L A ++ALAD G+ + ELD + GV+IGSG+GG+ +A
Sbjct: 61 DRKELRRMDRFAQFALAAAEEALADAGLDPE---ELDPERIGVVIGSGIGGLATIEEAYR 117
Query: 285 ALRI-SYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIR 343
AL ++++PF VP A NM + +A+ LG GPNY++STACA+ I +AA I
Sbjct: 118 ALLEKGPRRVSPFFVPMALPNMAAGQVAIRLGLRGPNYTVSTACASGAHAIGDAARLIRL 177
Query: 344 GEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 403
G A+V++ GG++A + P+ L GF A RALS RN+DP KASRP+D +RDGFV+GEGAGVL+
Sbjct: 178 GRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDRDGFVLGEGAGVLV 237
Query: 404 LEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNY 463
LE LEHAK RGAKIYAE G +SDAYH+T P PDG G + ALA +G+S ED++Y
Sbjct: 238 LESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALADAGLSPEDIDY 297
Query: 464 INAHATSTPAGDIKEYQALIHCFGQ-NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRT 522
INAH TSTP D E +A+ FG+ + + V+STKSM GHLLGAAGAVEAIA + A+R
Sbjct: 298 INAHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLALRD 357
Query: 523 GWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIF 572
G + P INLE PD D + + +E ++ ALSNSFGFGGHN+S++F
Sbjct: 358 GVLPPTINLEEPDPECDLDYVPNEAREA-PIRYALSNSFGFGGHNASLVF 406
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KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. Length = 406 |
| >gnl|CDD|200247 TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II | Back alignment and domain information |
|---|
Score = 553 bits (1427), Expect = 0.0
Identities = 202/410 (49%), Positives = 277/410 (67%), Gaps = 6/410 (1%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 224
+RVVVTG+G V+PLG+ + F+ NLL G SGI I FD + P KIA E+K F + ++
Sbjct: 1 RRVVVTGLGAVTPLGNGVEEFWENLLAGKSGIGPITRFDASDLPVKIAGEVKDFDPEDYI 60
Query: 225 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIE 284
K ++RMD+F+ Y L A K+A+ D G+ + E D + GV+IGSG+GG++ +
Sbjct: 61 DKKEARRMDRFIQYALAAAKEAVEDSGLDIE---EEDAERVGVIIGSGIGGLETIEEQHI 117
Query: 285 ALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIR 343
L ++++PF +P + NM + +++ G GPN+++ TACAT I +A I R
Sbjct: 118 VLLEKGPRRVSPFFIPMSIINMAAGQISIRYGAKGPNHAVVTACATGTHAIGDAFRLIQR 177
Query: 344 GEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 403
G+A+VM+ GG++AA+ P+G+ GF A +ALS RN+DP KASRP+D +RDGFVMGEGAGVL+
Sbjct: 178 GDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKDRDGFVMGEGAGVLV 237
Query: 404 LEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNY 463
LEELEHAK RGAKIYAE G + DAYH+T P P+G G + AL +G++ EDV+Y
Sbjct: 238 LEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRAALKDAGINPEDVDY 297
Query: 464 INAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRT 522
INAH TSTP GD E +A+ FG + L V+STKSM GHLLGAAGA+EAI V A+R
Sbjct: 298 INAHGTSTPLGDKAETKAIKRVFGDHAYKLAVSSTKSMTGHLLGAAGAIEAIFTVLALRD 357
Query: 523 GWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIF 572
G + P INL+NPD D + V + ++ ALSNSFGFGGHN+S++F
Sbjct: 358 GIVPPTINLDNPDPECDLD-YVPNEAREAKIDYALSNSFGFGGHNASLVF 406
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3-oxoacyl-[acyl-carrier-protein] synthase 2 (KAS-II, FabF) is involved in the condensation step of fatty acid biosynthesis in which the malonyl donor group is decarboxylated and the resulting carbanion used to attack and extend the acyl group attached to the acyl carrier protein. Most genomes encoding fatty acid biosynthesis contain a number of condensing enzymes, often of all three types: 1, 2 and 3. Synthase 2 is mechanistically related to synthase 1 (KAS-I, FabB) containing a number of absolutely conserved catalytic residues in common. This model is based primarily on genes which are found in apparent operons with other essential genes of fatty acid biosynthesis (GenProp0681). The large gap between the trusted cutoff and the noise cutoff contains many genes which are not found adjacent to genes of the fatty acid pathway in genomes that often also contain a better hit to this model. These genes may be involved in other processes such as polyketide biosyntheses. Some genomes contain more than one above-trusted hit to this model which may result from recent paralogous expansions. Second hits to this model which are not next to other fatty acid biosynthesis genes may be involved in other processes. FabB sequences should fall well below the noise cutoff of this model [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 407 |
| >gnl|CDD|235987 PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 532 bits (1372), Expect = 0.0
Identities = 211/419 (50%), Positives = 281/419 (67%), Gaps = 16/419 (3%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 224
+RVVVTG+G VSPLG++ + + NLL G SGI I FD + KIA E+K F+ D ++
Sbjct: 2 RRVVVTGLGAVSPLGNDVESTWKNLLAGKSGIGPITHFDTSDLAVKIAGEVKDFNPDDYM 61
Query: 225 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIE 284
+ K ++RMD+F+ Y + A K+A+ D G+ + E + + GV+IGSG+GG++ +
Sbjct: 62 SRKEARRMDRFIQYGIAAAKQAVEDAGL---EITEENADRIGVIIGSGIGGLETIEEQHI 118
Query: 285 AL------RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAA 338
L R+S PF VP A NM + +++ G GPN+SI TACAT I +AA
Sbjct: 119 TLLEKGPRRVS-----PFFVPMAIINMAAGHVSIRYGAKGPNHSIVTACATGAHAIGDAA 173
Query: 339 NHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEG 398
I G+A+VM+ GG++AA+ P+G+ GF A RALS RN+DP +ASRP+D +RDGFVMGEG
Sbjct: 174 RLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDRDGFVMGEG 233
Query: 399 AGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSR 458
AG+L+LEELEHAK RGAKIYAE G T DAYHMT P PDG G ++ AL +G++
Sbjct: 234 AGILVLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKDAGINP 293
Query: 459 EDVNYINAHATSTPAGDIKEYQALIHCFGQ-NRGLRVNSTKSMIGHLLGAAGAVEAIAVV 517
ED++YINAH TSTPAGD E QA+ FG+ + V+STKSM GHLLGAAGAVEAI V
Sbjct: 294 EDIDYINAHGTSTPAGDKAETQAIKRVFGEHAYKVAVSSTKSMTGHLLGAAGAVEAIFSV 353
Query: 518 QAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 576
AIR I P INL+NPD D + + +ER ++ ALSNSFGFGG N+S++F Y+
Sbjct: 354 LAIRDQVIPPTINLDNPDEECDLDYVPNEARER-KIDYALSNSFGFGGTNASLVFKRYE 411
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Length = 411 |
| >gnl|CDD|235781 PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 531 bits (1371), Expect = 0.0
Identities = 186/425 (43%), Positives = 255/425 (60%), Gaps = 12/425 (2%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKS---- 217
M +KR+VVTGMG VSPLG + F+ LL G SGI + F TKI ++
Sbjct: 1 MNKKRIVVTGMGAVSPLGCGVETFWQRLLAGQSGIRTLTDFPVGDLATKIGGQVPDLAED 60
Query: 218 ----FSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGL 273
F D ++ PK ++MD+F+L+ + A K+ALA G D D+ + +IGSG+
Sbjct: 61 AEAGFDPDRYLDPKDQRKMDRFILFAMAAAKEALAQAGWDPD--TLEDRERTATIIGSGV 118
Query: 274 GGMKVFYDAIEALRI-SYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNF 332
GG +A+ L ++++PF +P TNM + +++ G+ GP + TACA
Sbjct: 119 GGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYGFKGPLGAPVTACAAGVQ 178
Query: 333 CILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNND-PTKASRPWDINRD 391
I +AA I GEA+V +CGG++AA+ + L GF A RALS R ND P +ASRP+D +RD
Sbjct: 179 AIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDRDRD 238
Query: 392 GFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKAL 451
GFVMGEGAG+L++E LEHA RGA AE G ++DAYHMT DG G + AL
Sbjct: 239 GFVMGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLIAL 298
Query: 452 AHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAV 511
+G+ E+V ++NAHATSTP GD+ E A+ FG GL V+STKS GHLLGAAG V
Sbjct: 299 RQAGIPPEEVQHLNAHATSTPVGDLGEVAAIKKVFGHVSGLAVSSTKSATGHLLGAAGGV 358
Query: 512 EAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSII 571
EAI + A+R P +NLENPD + +V K +++ ALSN FGFGG N+SI+
Sbjct: 359 EAIFTILALRDQIAPPTLNLENPDPAAEGLDVVANKARPMDMDYALSNGFGFGGVNASIL 418
Query: 572 FSPYK 576
F ++
Sbjct: 419 FRRWE 423
|
Length = 424 |
| >gnl|CDD|223381 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 473 bits (1219), Expect = e-164
Identities = 200/414 (48%), Positives = 266/414 (64%), Gaps = 8/414 (1%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 224
+RVV+TG+G+VS LG+ + + LL G SGI I FD + KIA EIK D +
Sbjct: 3 RRVVITGLGIVSSLGNGVEEVWAALLAGKSGIRPITRFDASGLGVKIAGEIKDL--DDQI 60
Query: 225 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIE 284
A K + MD+F + A +AL D G+ + + GV IGSG+GG++ ++
Sbjct: 61 AKKERRFMDRFSQLAVVAAVEALEDAGLDNE---LNVDMRVGVAIGSGIGGLEDIEFDLD 117
Query: 285 ALRISY--KKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHII 342
AL + K+++PF VP N+ + +A+ G GPNY+ TACAT I +A I
Sbjct: 118 ALLLEGLRKRISPFLVPKMLPNLAAGNVAIVFGLKGPNYTPVTACATGAHAIGDAVRLIR 177
Query: 343 RGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 402
G+A+V++ GG++AA+ P+G+ GF A RALS RN+DP KASRP+D NRDGFV+GEGAG L
Sbjct: 178 LGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDKNRDGFVIGEGAGAL 237
Query: 403 LLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVN 462
+LEELEHA RGAKIYAE G TSDAYH+T P PDG G I + ALA +G++ ED++
Sbjct: 238 VLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAGLTPEDID 297
Query: 463 YINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIR 521
YINAH TSTPA D E A+ FG++ + L V+STKS+ GH LGAAGAVEAI + A+R
Sbjct: 298 YINAHGTSTPANDKAESLAIKRVFGEHAKSLPVSSTKSLTGHTLGAAGAVEAIISLLALR 357
Query: 522 TGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 575
G I P INL+NPD +V + V+AALSNSFGFGG N+S++F Y
Sbjct: 358 DGIIPPTINLDNPDPEAADLDVVPNEARTGAVRAALSNSFGFGGTNASLVFKRY 411
|
Length = 412 |
| >gnl|CDD|240245 PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein synthase; Provisional | Back alignment and domain information |
|---|
Score = 393 bits (1012), Expect = e-132
Identities = 177/424 (41%), Positives = 255/424 (60%), Gaps = 25/424 (5%)
Query: 174 LVSPLGHEPDVFYNNLLEGVSGISEIETFDC----------------TSFPTKIAAEIKS 217
+V+PLG + + L+ G SGI ++ F + P +IAAE+
Sbjct: 1 VVTPLGVGAESTWEALIAGKSGIRKLTEFPKFLPDCIPEQKALENLVAAMPCQIAAEVDQ 60
Query: 218 FSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMK 277
D +KR + + + A ++ALAD + D+++E D+ + GV IGSG+G +
Sbjct: 61 SEFDP-SDFAPTKRESRATHFAMAAAREALADAKL--DILSEKDQERIGVNIGSGIGSLA 117
Query: 278 VFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILN 336
D ++ L + +++P+ +P NM + ++A+ GP+ S TACAT CI
Sbjct: 118 DLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKHKLKGPSGSAVTACATGAHCIGE 177
Query: 337 AANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR-NNDPTKASRPWDINRDGFVM 395
A I GEA++M+CGG++A++ P+ GF RAL + N+DP +ASRP+D +R GFVM
Sbjct: 178 AFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDRAGFVM 237
Query: 396 GEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSG 455
GEGAG+L+LEELEHA +RGAKIYAE RG +SDA+H+T PHPDG G C+E AL
Sbjct: 238 GEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKDGA 297
Query: 456 -VSREDVNYINAHATSTPAGDIKEYQALIHCFG--QNRGLRVNSTKSMIGHLLGAAGAVE 512
++ DV+Y+NAHATSTP GD E +A+ FG L V+STK +GHLLGAAGAVE
Sbjct: 298 NININDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGAVE 357
Query: 513 AIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLE-VKAALSNSFGFGGHNSSII 571
+I + ++ I P INLENPDA D N++ G L+ + A LS SFGFGG N++++
Sbjct: 358 SIVTILSLYEQIIPPTINLENPDAECDLNLVQGKTAHPLQSIDAVLSTSFGFGGVNTALL 417
Query: 572 FSPY 575
F+ Y
Sbjct: 418 FTKY 421
|
Length = 421 |
| >gnl|CDD|236265 PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 366 bits (942), Expect = e-122
Identities = 181/416 (43%), Positives = 246/416 (59%), Gaps = 20/416 (4%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 224
KRVVVTG+G+++ LG + + + G GI +I FD + FP +IA EI F +
Sbjct: 2 KRVVVTGIGMINSLGLNKESSFKAICNGECGIKKITLFDASDFPVQIAGEITDFDPTEVM 61
Query: 225 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIE 284
PK K+ D+F+ L A ++A+ D G + ELD + GV SG+GG+ IE
Sbjct: 62 DPKEVKKADRFIQLGLKAAREAMKDAGFLPE---ELDAERFGVSSASGIGGLP----NIE 114
Query: 285 ALRISY-----KKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAAN 339
I +K++PF +P A NM ++++ G GPN S TACA I+ A
Sbjct: 115 KNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGLKGPNLSSVTACAAGTHAIIEAVK 174
Query: 340 HIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGA 399
I+ G A+ ML G+++A+ P+G+GGF A +ALS RN+DP KASRP+D +RDGFVMGEGA
Sbjct: 175 TIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKDRDGFVMGEGA 234
Query: 400 GVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRE 459
G L+LEE E AKKRGAKIYAE G + DA H+T P P+ G + ++ AL +G +
Sbjct: 235 GALVLEEYESAKKRGAKIYAEIIGFGESGDANHITSPAPE--GPLRAMKAALEMAGNPK- 291
Query: 460 DVNYINAHATSTPAGDIKEYQALIHCFGQNRGL-RVNSTKSMIGHLLGAAGAVEAIAVVQ 518
++YINAH TSTP D E AL FG + V+STK IGH LGAAGA+EA+ +
Sbjct: 292 -IDYINAHGTSTPYNDKNETAALKELFGSKEKVPPVSSTKGQIGHCLGAAGAIEAVISIM 350
Query: 519 AIRTGWIHPNINLENPDAVVDTNVLVGPKKER-LEVKAALSNSFGFGGHNSSIIFS 573
A+R G + P IN E PD D + + P R E+ +SNSFGFGG N +IF
Sbjct: 351 AMRDGILPPTINQETPDPECDLDYI--PNVARKAELNVVMSNSFGFGGTNGVVIFK 404
|
Length = 406 |
| >gnl|CDD|181539 PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 367 bits (942), Expect = e-122
Identities = 187/414 (45%), Positives = 273/414 (65%), Gaps = 6/414 (1%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 221
M ++RVVVTGMG++SP+G+ + + LL G SGI IE FD T+F T+ A +K F+ +
Sbjct: 1 MSKRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKDFNCE 60
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 281
+++ K +++MD F+ Y + AG +AL D G+ + E + + GV IGSG+GG+ +
Sbjct: 61 EYMSKKDARKMDLFIQYGIAAGIQALDDSGLE---VTEENAHRIGVAIGSGIGGLGLIEA 117
Query: 282 AIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 340
+AL +K++PF VP NM + L++ G GPN +ISTAC T I +AA
Sbjct: 118 GHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARM 177
Query: 341 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 400
I G+A+ M+ GG++ A P+G+ GF A +ALS RN++P KASRPWD +RDGFV+G+GAG
Sbjct: 178 IAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGDGAG 237
Query: 401 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 460
+++LEE EHAK RGAKIYAE G + DAYHMT P DG G L +E A+ +GV+ E
Sbjct: 238 MMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQ 297
Query: 461 VNYINAHATSTPAGDIKEYQALIHCFGQ--NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQ 518
+ Y+NAH TSTPAGD+ E + + G+ ++ + V+STKSM GHLLGAAG+VEAI V
Sbjct: 298 IGYVNAHGTSTPAGDVAEIKGIKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITVM 357
Query: 519 AIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIF 572
++ + P INL++P+ +D +++ ++ ++ A+ NSFGFGG N S+IF
Sbjct: 358 SLVDQIVPPTINLDDPEEGLDIDLVPHTARKVESMEYAICNSFGFGGTNGSLIF 411
|
Length = 414 |
| >gnl|CDD|215449 PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protein] synthase | Back alignment and domain information |
|---|
Score = 365 bits (938), Expect = e-121
Identities = 183/444 (41%), Positives = 262/444 (59%), Gaps = 40/444 (9%)
Query: 160 PHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEI-------ETFDCT------- 205
P + +RVVVTG+GLV+PLG + + L+ G G+ + ++ D
Sbjct: 1 PPLPTRRVVVTGLGLVTPLGCGVETTWRRLIAGECGVRALTQDDLKMKSEDEETQLYTLD 60
Query: 206 SFPTKIAAEIKS------FSTDGWVAPKLSKRMDKFMLYLLTAGKKALADG--GITEDVM 257
P+++AA + F + W+ S+ +F+ Y L A +AL+D +ED
Sbjct: 61 QLPSRVAALVPRGTGPGDFDEELWLN---SRSSSRFIGYALCAADEALSDARWLPSEDE- 116
Query: 258 NELDKSKCGVLIGSGLGGMKVFYDAIEALRISYK--KMNPFCVPFATTNMGSAMLAMDLG 315
K + GV IG G+G + +A L + +++PF VP NM + +++ G
Sbjct: 117 ---AKERTGVSIGGGIGSITDILEA-AQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG 172
Query: 316 WMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR 375
+ GPN++ TACAT I +A I G+A+VM+ GG+++++ + + GF RALS +
Sbjct: 173 FQGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTK 232
Query: 376 NND-PTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMT 434
N PT+ASRP+D +RDGFV+GEGAGVL+LEELEHAK+RGAKIYAE RG + DA+H+T
Sbjct: 233 FNSCPTEASRPFDCDRDGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHIT 292
Query: 435 EPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR---G 491
+PH DG G +L + +AL SG+ V+Y+NAHATSTP GD E +A+ F ++ G
Sbjct: 293 QPHEDGRGAVLAMTRALQQSGLHPNQVDYVNAHATSTPLGDAVEARAIKTVFSEHATSGG 352
Query: 492 LRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNV--LVGPKKE 549
L +STK GHLLGAAGAVEAI V AI G P +NLE PD + D L K
Sbjct: 353 LAFSSTKGATGHLLGAAGAVEAIFSVLAIHHGIAPPTLNLERPDPIFDDGFVPLTASKAM 412
Query: 550 RLEVKAALSNSFGFGGHNSSIIFS 573
++AALSNSFGFGG N+S++F+
Sbjct: 413 L--IRAALSNSFGFGGTNASLLFT 434
|
Length = 437 |
| >gnl|CDD|181184 PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Score = 288 bits (740), Expect = 3e-92
Identities = 162/421 (38%), Positives = 232/421 (55%), Gaps = 26/421 (6%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 224
+RVV+TG+G+VS +G+ +L EG SGI+ F +++ +K G +
Sbjct: 2 RRVVITGLGIVSSIGNNQQEVLASLREGRSGITFSPEFAEMGMRSQVWGNVK-LDPTGLI 60
Query: 225 APKLSKRMDKFMLYLLTAGKKALADGGITED-VMNELDKSKCGVLIGSGLGGMKVFYDAI 283
K+ + M Y A ++A+AD G++E+ V N + G++ GSG G + +A
Sbjct: 61 DRKVMRFMGDASAYAYLAMEQAIADAGLSEEQVSNP----RTGLIAGSGGGSTRNQVEAA 116
Query: 284 EALRI--SYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHI 341
+A+R K++ P+ V A + SA LA G NYSIS+ACATS CI NA I
Sbjct: 117 DAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKIKGVNYSISSACATSAHCIGNAVEQI 176
Query: 342 IRGEANVMLCGGSD-----AAVIPIGLGGFVACRALSQRNND-PTKASRPWDINRDGFVM 395
G+ +++ GG + + + F A ALS + ND P KASR +D NRDGFV+
Sbjct: 177 QLGKQDIVFAGGGEELDWEMSCL------FDAMGALSTKYNDTPEKASRAYDANRDGFVI 230
Query: 396 GEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSG 455
G GV+++EELEHA RGAKIYAE G TSD Y M P G G + C++ ALA
Sbjct: 231 AGGGGVVVVEELEHALARGAKIYAEIVGYGATSDGYDMVA--PSGEGAVRCMQMALA--T 286
Query: 456 VSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIA 515
V ++YIN H TSTP GD+KE A+ FG +++TKS+ GH LGAAG EAI
Sbjct: 287 V-DTPIDYINTHGTSTPVGDVKELGAIREVFGDKSP-AISATKSLTGHSLGAAGVQEAIY 344
Query: 516 VVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 575
+ + G+I P+ N+E D +V + E+ +SNSFGFGG N++++F Y
Sbjct: 345 SLLMMEHGFIAPSANIEELDPQAAGMPIVTETTDNAELTTVMSNSFGFGGTNATLVFRRY 404
Query: 576 K 576
K
Sbjct: 405 K 405
|
Length = 406 |
| >gnl|CDD|235817 PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 279 bits (717), Expect = 1e-88
Identities = 160/434 (36%), Positives = 213/434 (49%), Gaps = 24/434 (5%)
Query: 156 TKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEI 215
T + H+ + V VTGMG+V+ LG + L G SGI I F T+IA +
Sbjct: 2 TAYRDHLGRPIVAVTGMGVVTSLGQGKADNWAALTAGESGIHTITRFPTEGLRTRIAGTV 61
Query: 216 KSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMN----------ELDKSKC 265
+ A LS+ + + A ++ALA GI + EL+
Sbjct: 62 DFLPESPFGASALSEALAR------LAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPAR 115
Query: 266 GVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGS--AMLAMDLGWMGPNYSI 323
L + YD + LR + + F GS LA G G S+
Sbjct: 116 FALAAAVGDNDAPSYDRL--LRAA--RGGRFDALHERFQFGSIADRLADRFGTRGLPISL 171
Query: 324 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKAS 383
STACA+ I I RGE + LC +D +V L F ALS +N+ P KAS
Sbjct: 172 STACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKAS 231
Query: 384 RPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGV 443
+P+ +RDGFVM EGAG L+LE LE A RGAKI G +D++H T PDG
Sbjct: 232 KPFSKDRDGFVMAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPDGSPA 291
Query: 444 ILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIG 502
I I ALA +G++ E ++YINAH TSTP D EY L FG+ + V+S KSMIG
Sbjct: 292 IGAIRAALADAGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFGERLASIPVSSNKSMIG 351
Query: 503 HLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFG 562
H L AAGAVEA+ + I+TG + P IN +NPD + +V V V A LSNSFG
Sbjct: 352 HTLTAAGAVEAVFSLLTIQTGRLPPTINYDNPDPAIPLDV-VPNVARDARVTAVLSNSFG 410
Query: 563 FGGHNSSIIFSPYK 576
FGG N+S++ +
Sbjct: 411 FGGQNASLVLTAEP 424
|
Length = 425 |
| >gnl|CDD|236129 PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 278 bits (712), Expect = 6e-88
Identities = 141/417 (33%), Positives = 222/417 (53%), Gaps = 20/417 (4%)
Query: 167 VVVTGMGLVSPLGHEPDVFYNNLLEGVSGI-----SEIETFDCTSFPTKIAAEIKSFSTD 221
VVVTG+ + + L + + + LL+G SGI +E FD P +I + D
Sbjct: 14 VVVTGIAMTTALATDAETTWKLLLDGQSGIRTLDDPFVEEFD---LPVRIGGHLLE-EFD 69
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 281
+ +RM G++ + G E +D ++ V IG+GLG +
Sbjct: 70 HQLTRVELRRMSYLQRMSTVLGRRVWENAGSPE-----VDTNRLMVSIGTGLGSAEELVF 124
Query: 282 AIEALRI-SYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 340
A + +R + ++P V N +A + ++ + +ACA+ + I A
Sbjct: 125 AYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAKAGVITPVSACASGSEAIAQAWRQ 184
Query: 341 IIRGEANVMLCGGSDAAVIPIGLGGFVACRA-LSQRNNDPTKASRPWDINRDGFVMGEGA 399
I+ GEA++ +CGG + + + + GF R +S N+DP A RP+D +RDGFV GEG
Sbjct: 185 IVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDRDGFVFGEGG 244
Query: 400 GVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRE 459
++++E EHAK RGA I A G S TSD +HM P P+G + +A+ +G++
Sbjct: 245 ALMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAMTRAIELAGLTPG 304
Query: 460 DVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQA 519
D++++NAHAT T GD+ E +A+ + G +R V + KS +GH +GA GAVE+I V A
Sbjct: 305 DIDHVNAHATGTSVGDVAEGKAINNALGGHRP-AVYAPKSALGHSVGAVGAVESILTVLA 363
Query: 520 IRTGWIHPNINLENPDAVVDTNVLVG-PKKERLEVKAALSNSFGFGGHNSSIIFSPY 575
+R G I P +NLEN D +D +V+ G P+ + A++NSFGFGGHN ++ F Y
Sbjct: 364 LRDGVIPPTLNLENLDPEIDLDVVAGEPRPG--NYRYAINNSFGFGGHNVALAFGRY 418
|
Length = 418 |
| >gnl|CDD|238424 cd00828, elong_cond_enzymes, "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases | Back alignment and domain information |
|---|
Score = 254 bits (651), Expect = 4e-79
Identities = 152/414 (36%), Positives = 230/414 (55%), Gaps = 19/414 (4%)
Query: 166 RVVVTGMGLVSPLG---HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDG 222
RVV+TG+G+VSP G E + F+ L EG SGI+ + + F +A +I + G
Sbjct: 2 RVVITGIGVVSPHGEGCDEVEEFWEALREGRSGIAPVARLK-SRFDRGVAGQIPTGDIPG 60
Query: 223 WVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDA 282
W A + + +D+ L L A ++ALAD GIT+ E+ S+ GV++GSG+GG++
Sbjct: 61 WDAKR-TGIVDRTTLLALVATEEALADAGITDP--YEVHPSEVGVVVGSGMGGLRFLRRG 117
Query: 283 IEALRISYKKMNPFCVP--FATTNMGSAMLAMDL-GWMGPNYSISTACATSNFCILNAAN 339
+ + +NP+ P + N + + + L GP + ACAT+ + A
Sbjct: 118 GKLD---ARAVNPYVSPKWMLSPNTVAGWVNILLLSSHGPIKTPVGACATALEALDLAVE 174
Query: 340 HIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGA 399
I G+A++++ GG + + GL GF ALS +P + SRP+D RDGFV EGA
Sbjct: 175 AIRSGKADIVVVGGVED-PLEEGLSGFANMGALSTAEEEPEEMSRPFDETRDGFVEAEGA 233
Query: 400 GVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRE 459
GVL+LE E A RGA IY G + T+D + P G G+ I ALA +G+S +
Sbjct: 234 GVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVP-AGGKGIARAIRTALAKAGLSLD 292
Query: 460 DVNYINAHATSTPAGDIKEYQALIHCFGQNRG--LRVNSTKSMIGHLLGAAGAVEAIAVV 517
D++ I+AH TSTPA D+ E +A I G L V + K++ GH GAAGA++ I +
Sbjct: 293 DLDVISAHGTSTPANDVAESRA-IAEVAGALGAPLPVTAQKALFGHSKGAAGALQLIGAL 351
Query: 518 QAIRTGWIHPNINLENPDAVVDTNVLVG-PKKERLEVKAALSNSFGFGGHNSSI 570
Q++ G I P NL++ D V+ +VG + L+V+AAL N+FGFGG N+++
Sbjct: 352 QSLEHGLIPPTANLDDVDPDVEHLSVVGLSRDLNLKVRAALVNAFGFGGSNAAL 405
|
They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. Length = 407 |
| >gnl|CDD|181657 PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 249 bits (639), Expect = 3e-77
Identities = 152/431 (35%), Positives = 212/431 (49%), Gaps = 51/431 (11%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDC-TSFPTKIAAEIKSFSTDGW 223
+RVVVTGMG V+ LG + L G + + + +D T++AA I F
Sbjct: 2 RRVVVTGMGGVTALGEDWQTIAARLKAGRNAVRRMPEWDRYDGLNTRLAAPIDDFELPAH 61
Query: 224 VAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAI 283
K + M + L A + AL D G+ D + L + G+ GS G D I
Sbjct: 62 YTRKKIRSMGRVSLMATRASELALEDAGLLGDPI--LTDGRMGIAYGSSTGST----DPI 115
Query: 284 EAL-------------RISYKKMNPFCVPFATT--NMGSAMLAMDLGWMGPNYSISTACA 328
A +Y +M P TT N+G + G G S+AC
Sbjct: 116 GAFGTMLLEGSMSGITATTYVRMMPH-----TTAVNVG-----LFFGLKGRVIPTSSACT 165
Query: 329 TSNFCILNAANHIIRGEANVMLCGG------SDAAVIPIGLGGFVACRALSQRNNDPTKA 382
+ + I A I G VML GG ++AAV F A S RN+ P
Sbjct: 166 SGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTEAAV-------FDTLFATSTRNDAPELT 218
Query: 383 SRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVG 442
RP+D NRDG V+GEGAG L+LEELEHAK RGA IYAE G SD H+T+P + +
Sbjct: 219 PRPFDANRDGLVIGEGAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAHVTQPQAETMQ 278
Query: 443 VILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIG 502
+ +E AL +G++ ED+ Y+NAH T+T GDI E QA FG + ++S KS G
Sbjct: 279 --IAMELALKDAGLAPEDIGYVNAHGTATDRGDIAESQATAAVFGAR--MPISSLKSYFG 334
Query: 503 HLLGAAGAVEAIAVVQAIRTGWIHPNINLENPD-AVVDTNVLVGPKKERLEVKAALSNSF 561
H LGA GA+EA ++ + GW P +NL D A + ++G +E ++ + +SN+F
Sbjct: 335 HTLGACGALEAWMSIEMMNEGWFAPTLNLTQVDPACGALDYIMGEARE-IDTEYVMSNNF 393
Query: 562 GFGGHNSSIIF 572
FGG N+S+IF
Sbjct: 394 AFGGINTSLIF 404
|
Length = 405 |
| >gnl|CDD|173154 PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protein) synthase II; Provisional | Back alignment and domain information |
|---|
Score = 240 bits (612), Expect = 3e-74
Identities = 138/320 (43%), Positives = 190/320 (59%), Gaps = 8/320 (2%)
Query: 258 NELDKSKCGVLIGSGLGGMKVFYDAIEALRIS----YKKMNPFCVPFATTNMGSAMLAMD 313
N + + +IG+G+GG F A+R S K+++PF VP N+ + +++
Sbjct: 21 NTEKQERTATIIGAGIGG---FPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIK 77
Query: 314 LGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALS 373
+ GP + TACA I +A I EA+V LCGG++A + + L GF A RALS
Sbjct: 78 HHFKGPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALS 137
Query: 374 QR-NNDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYH 432
N+ P KASRP+D RDGFVMGEGAG+L++EELEHA RGAK AE G ++DAYH
Sbjct: 138 THFNSTPEKASRPFDTARDGFVMGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYH 197
Query: 433 MTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGL 492
MT DG G ++ AL +G++ E V ++NAHATSTP GD+ E A+ H FG++ L
Sbjct: 198 MTSGAEDGDGAYRAMKIALRQAGITPEQVQHLNAHATSTPVGDLGEINAIKHLFGESNAL 257
Query: 493 RVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLE 552
+ STKS GHLLGAAG +E I V A+R + +NLENPD ++ + +
Sbjct: 258 AITSTKSATGHLLGAAGGLETIFTVLALRDQIVPATLNLENPDPAAKGLNIIAGNAQPHD 317
Query: 553 VKAALSNSFGFGGHNSSIIF 572
+ ALSN FGF G N+SI+
Sbjct: 318 MTYALSNGFGFAGVNASILL 337
|
Length = 342 |
| >gnl|CDD|180839 PRK07103, PRK07103, polyketide beta-ketoacyl:acyl carrier protein synthase; Validated | Back alignment and domain information |
|---|
Score = 222 bits (568), Expect = 7e-67
Identities = 122/421 (28%), Positives = 193/421 (45%), Gaps = 31/421 (7%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGI--------SEIETFDCTSFPTKIAAEIK 216
VVVTG+G+VS +G F LL G + I AE+
Sbjct: 2 DEVVVTGVGVVSAIGQGRPSFAAALLAGRHAFGVMRRPGRQVPDDAGAGLASAFIGAELD 61
Query: 217 SFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGM 276
S + + KL +R L A ++A D + +D + G+++G G
Sbjct: 62 SLALPERLDAKLLRRASLSAQAALAAAREAWRDAA-----LGPVDPDRIGLVVG----GS 112
Query: 277 KVFYDAIEALRISYKKMNPFCVP-FATTNMGS---AMLAMDLGWMGPNYSISTACATSNF 332
+ + +Y+ F P + + M + + + G G +++ A A+
Sbjct: 113 NLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIRGEGFTVGGASASGQL 172
Query: 333 CILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRAL-SQRN-NDPTKASRPWDINR 390
++ AA + G + + G+ + + A+ S R ++P A RP+D +R
Sbjct: 173 AVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDR 232
Query: 391 DGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKA 450
DGF+ GE G ++LE E A++RGA+ YA+ G S DA P P G + I A
Sbjct: 233 DGFIYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANR--GPDPSLEGEMRVIRAA 290
Query: 451 LAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGA 510
L +G+ ED++Y+N H T +P GD E AL +N+TKS+ GH L AAG
Sbjct: 291 LRRAGLGPEDIDYVNPHGTGSPLGDETELAALFAS--GLAHAWINATKSLTGHGLSAAGI 348
Query: 511 VEAIAVVQAIRTGWIHPNINLENPDAVVDTNV-LVGPKKERLEVKAALSNSFGFGGHNSS 569
VE IA + +R G++HP+ NL+ P +D VG E ++ ALS SFGFGG N++
Sbjct: 349 VELIATLLQMRAGFLHPSRNLDEP---IDERFRWVGSTAESARIRYALSLSFGFGGINTA 405
Query: 570 I 570
+
Sbjct: 406 L 406
|
Length = 410 |
| >gnl|CDD|238429 cd00833, PKS, polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations | Back alignment and domain information |
|---|
Score = 214 bits (548), Expect = 1e-63
Identities = 129/435 (29%), Positives = 199/435 (45%), Gaps = 45/435 (10%)
Query: 166 RVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEI--ETFDCTSFPTKIAAEIKSFSTDGW 223
+ + GM P +PD F+ NLLEG ISEI + +D + K+++ G
Sbjct: 2 PIAIVGMACRFPGAADPDEFWENLLEGRDAISEIPEDRWDADGYYPDPGKPGKTYTRRGG 61
Query: 224 --------------VAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLI 269
++P+ ++ MD LL +AL D G + L S+ GV +
Sbjct: 62 FLDDVDAFDAAFFGISPREAEAMDPQQRLLLEVAWEALEDAGYS---PESLAGSRTGVFV 118
Query: 270 GSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACAT 329
G+ D +E L +++ + + + ++ GP+ ++ TAC++
Sbjct: 119 GAS------SSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLRGPSLTVDTACSS 172
Query: 330 SNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDIN 389
S + A + GE ++ L GG + + P GF LS P RP+D +
Sbjct: 173 SLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLS-----PDGRCRPFDAD 227
Query: 390 RDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAY--HMTEPHPDGVGVILCI 447
DG+V GEG GV++L+ L A + G +IYA RG + D +T P + I
Sbjct: 228 ADGYVRGEGVGVVVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQ--AALI 285
Query: 448 EKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRG----LRVNSTKSMIGH 503
+A A +GV D++Y+ AH T TP GD E +AL FG +R L + S KS IGH
Sbjct: 286 RRAYARAGVDPSDIDYVEAHGTGTPLGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGH 345
Query: 504 LLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD---TNVLV----GPKKERLEVKAA 556
L AAG I VV A+ G I PN++ E P+ +D + + V P + A
Sbjct: 346 LEAAAGLAGLIKVVLALEHGVIPPNLHFETPNPKIDFEESPLRVPTEARPWPAPAGPRRA 405
Query: 557 LSNSFGFGGHNSSII 571
+SFGFGG N+ +I
Sbjct: 406 GVSSFGFGGTNAHVI 420
|
PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. Length = 421 |
| >gnl|CDD|215723 pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, N-terminal domain | Back alignment and domain information |
|---|
Score = 201 bits (513), Expect = 8e-61
Identities = 84/254 (33%), Positives = 128/254 (50%), Gaps = 20/254 (7%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSF--PTKIAAEIKSFSTDG 222
+ V +TGMG P G P+ F+ LL G I E D + P+++A EI F D
Sbjct: 2 EPVAITGMGCRFPGGVGPEEFWELLLAGRDAIREFPA-DLSGLYPPSRVAGEIYGFDFDA 60
Query: 223 W---VAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVF 279
++P+ ++ MD L A +AL D G+ + D+ GV +GSG G
Sbjct: 61 AFFGISPREAEAMDPQQRLALEAAWEALEDAGLDPASLRGSDR--TGVFVGSGSG----D 114
Query: 280 YDAIEALRI--SYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNA 337
Y ++AL ++++P+ ++ + ++ LG GP+ ++ TAC++S L+A
Sbjct: 115 YAELQALDSAGGPRRVSPYLTGAWMPSVAAGRISYRLGLRGPSVTVDTACSSS-LVALHA 173
Query: 338 A-NHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMG 396
A I RGE ++ L GG +A + P G GF A AL + P KA P+ DGFV G
Sbjct: 174 AVRSIRRGECDLALAGGVEAPLTPGGFAGFSAAGALLSP-DGPCKAFDPFA---DGFVRG 229
Query: 397 EGAGVLLLEELEHA 410
EG G +LL+EL A
Sbjct: 230 EGVGAVLLKELSEA 243
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. The N-terminal domain contains most of the structures involved in dimer formation and also the active site cysteine. Length = 243 |
| >gnl|CDD|235653 PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 198 bits (506), Expect = 4e-58
Identities = 134/417 (32%), Positives = 193/417 (46%), Gaps = 48/417 (11%)
Query: 166 RVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVA 225
+VVVTG+GLVS LG + LL+G SGI + F P I + +
Sbjct: 3 KVVVTGIGLVSALGDLEQS-WQRLLQGKSGIKLHQPF--PELPPLPLGLIGNQPSS---L 56
Query: 226 PKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAI-- 283
L+K T AL D G+T + CGV+IGS G
Sbjct: 57 EDLTK----------TVVTAALKDAGLT------PPLTDCGVVIGSSRG-----CQGQWE 95
Query: 284 EALRISYKKMNPFCVPFATTN-------MGSAMLAMDLGWMGPNYSISTACATSNFCILN 336
+ R Y+ + N + A +G GP + ACAT + I
Sbjct: 96 KLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQGPVLAPMAACATGLWAIAQ 155
Query: 337 AANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMG 396
I G+ ++ G +A + P+ L GF AL+ T A P+D R+G V+G
Sbjct: 156 GVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALA-----KTGAY-PFDRQREGLVLG 209
Query: 397 EGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGV 456
EG +L+LE E A+KRGAKIY + G T DAYHM+ P PDG I I++ LA SG+
Sbjct: 210 EGGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLARSGL 269
Query: 457 SREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAV 516
+ ED++YI+AH T+T D +E + F V+STK GH LGA+GA+
Sbjct: 270 TPEDIDYIHAHGTATRLNDQREANLIQALFPHRVA--VSSTKGATGHTLGASGALGVAFS 327
Query: 517 VQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573
+ A+R + P + L+ P+ D N + + + ++ L SFGFGG N++I
Sbjct: 328 LLALRHQQLPPCVGLQEPE--FDLNFVRQAQ--QSPLQNVLCLSFGFGGQNAAIALG 380
|
Length = 381 |
| >gnl|CDD|236398 PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Score = 191 bits (487), Expect = 3e-55
Identities = 111/317 (35%), Positives = 157/317 (49%), Gaps = 34/317 (10%)
Query: 266 GVLIG---SGLG----GMKVFYDAIEAL--RISYKKMNPFCVPFATTNMGSAMLAMDLGW 316
GV++G SG+ + A AL Y + + + L LG
Sbjct: 98 GVVLGTSTSGILEGELAYRRRDPAHGALPADYHYAQQELGSL--------ADFLRAYLGL 149
Query: 317 MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRN 376
GP Y+ISTAC++S +A + G + + GG D+ + + L GF + +LS
Sbjct: 150 SGPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDS-LCRLTLNGFNSLESLS--- 205
Query: 377 NDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEP 436
P RP+ NRDG +GE A LLE R G +SDA+HM+ P
Sbjct: 206 PQPC---RPFSANRDGINIGEAAAFFLLE-------REDDAAVALLGVGESSDAHHMSAP 255
Query: 437 HPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNS 496
HP+G+G IL +++ALA +G++ D+ YIN H T+TP D E +A+ FG G+ +S
Sbjct: 256 HPEGLGAILAMQQALADAGLAPADIGYINLHGTATPLNDAMESRAVAAVFGD--GVPCSS 313
Query: 497 TKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAA 556
TK + GH LGAAGAVEA A+R G N PD + LV + L ++
Sbjct: 314 TKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDPALPPLYLVEN-AQALAIRYV 372
Query: 557 LSNSFGFGGHNSSIIFS 573
LSNSF FGG+N S+IF
Sbjct: 373 LSNSFAFGGNNCSLIFG 389
|
Length = 392 |
| >gnl|CDD|238421 cd00825, decarbox_cond_enzymes, decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 179 bits (455), Expect = 2e-51
Identities = 108/337 (32%), Positives = 167/337 (49%), Gaps = 16/337 (4%)
Query: 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMN 294
+ A ++A+AD G++ E K+ ++ GG + + +
Sbjct: 11 VSILGFEAAERAIADAGLSR----EYQKNPIVGVVVGTGGG---SPRFQVFGADAMRAVG 63
Query: 295 PFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGS 354
P+ V A S +A LG GP Y +S ACA S + AA+ + G+ +++L GGS
Sbjct: 64 PYVVTKAMFPGASGQIATPLGIHGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGS 123
Query: 355 DAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRG 414
+ P+ + P KASR +D DGFV G+GAG L++EELEHA RG
Sbjct: 124 EELAAPMDCEFDAMGALST-----PEKASRTFDAAADGFVFGDGAGALVVEELEHALARG 178
Query: 415 AKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAG 474
A IYAE G + T D M P G+ ++ALA +G++ D++Y+ AH T TP G
Sbjct: 179 AHIYAEIVGTAATIDGAGMGAFAPSAEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIG 238
Query: 475 DIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENP 534
D+KE + L FG V++TK+M G+L AA + V + G+I P+I++E
Sbjct: 239 DVKELKLLRSEFGDKS-PAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPSIHIEEL 297
Query: 535 DAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSII 571
D + + E++ AL N FG GG N++++
Sbjct: 298 DEAGL---NIVTETTPRELRTALLNGFGLGGTNATLV 331
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). Length = 332 |
| >gnl|CDD|238428 cd00832, CLF, Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria | Back alignment and domain information |
|---|
Score = 169 bits (429), Expect = 5e-47
Identities = 117/414 (28%), Positives = 196/414 (47%), Gaps = 23/414 (5%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 224
+R VVTG+G+V+P G + ++ +L+G SG+ I FD + +P ++A E+ F +
Sbjct: 1 RRAVVTGIGVVAPNGLGVEEYWKAVLDGRSGLGPITRFDPSGYPARLAGEVPDFDAAEHL 60
Query: 225 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIE 284
+L + D+ L A ALAD G+ + D GV+ S GG + ++
Sbjct: 61 PGRLLPQTDRMTRLALAAADWALADAGVDPAALPPYD---MGVVTASAAGGFEFGQRELQ 117
Query: 285 ALRISYKKMNPFCVP------FATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAA 338
L + K F N G +++ G GP+ + A + A
Sbjct: 118 KL---WSKGPRHVSAYQSFAWFYAVNTGQ--ISIRHGMRGPSGVVVAEQAGGLDALAQAR 172
Query: 339 NHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEG 398
+ RG +++ GG D+A+ P G ++ LS ++DP +A P+D G+V GEG
Sbjct: 173 RLVRRG-TPLVVSGGVDSALCPWGWVAQLSSGRLS-TSDDPARAYLPFDAAAAGYVPGEG 230
Query: 399 AGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD-GVGVILCIEKALAHSGVS 457
+L+LE+ A++RGA++Y E G + T D P G+ I ALA +G++
Sbjct: 231 GAILVLEDAAAARERGARVYGEIAGYAATFDP----PPGSGRPPGLARAIRLALADAGLT 286
Query: 458 REDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVV 517
EDV+ + A A P D E AL FG RG+ V + K+M G L ++ +
Sbjct: 287 PEDVDVVFADAAGVPELDRAEAAALAAVFGP-RGVPVTAPKTMTGRLYAGGAPLDVATAL 345
Query: 518 QAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSII 571
A+R G I P +N+ + +++ G + ++ AL + G GG NS+++
Sbjct: 346 LALRDGVIPPTVNVTDVPPAYGLDLVTGRPRP-AALRTALVLARGRGGFNSALV 398
|
CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. Length = 399 |
| >gnl|CDD|217236 pfam02801, Ketoacyl-synt_C, Beta-ketoacyl synthase, C-terminal domain | Back alignment and domain information |
|---|
Score = 144 bits (367), Expect = 2e-41
Identities = 52/119 (43%), Positives = 62/119 (52%), Gaps = 4/119 (3%)
Query: 418 YAEFRGGSFTSD-AYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDI 476
YA RG + D A H P+G I ALA +G+ EDV+Y+ AH T TP GD
Sbjct: 1 YAVIRGSAVNQDGAAHNGLTAPNGPAQARAIRAALADAGLDPEDVDYVEAHGTGTPLGDP 60
Query: 477 KEYQALIHCFGQNRG---LRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLE 532
E +AL FG R L V S KS IGHL AAG I V A+R G I P +NL+
Sbjct: 61 IEAEALKAVFGPGRDSQPLPVGSVKSNIGHLEAAAGVAGLIKAVLALRHGVIPPTLNLD 119
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. Length = 119 |
| >gnl|CDD|225858 COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 153 bits (389), Expect = 2e-39
Identities = 120/438 (27%), Positives = 195/438 (44%), Gaps = 45/438 (10%)
Query: 167 VVVTGMGLVSPLGHE-PDVFYNNLLEGVSGISEI--ETFDCTSF-------PTKIAAEIK 216
+ + GM P G + P+ F++ L EG I+E+ + +D ++ P K +
Sbjct: 6 IAIIGMACRFP-GADSPEEFWDLLKEGRDEITEVPADRWDVDAYYDPDPTVPGKSYSRWG 64
Query: 217 SFSTD---------GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGV 267
F D G ++P+ ++ MD LL +AL D GI D L S GV
Sbjct: 65 GFLDDVDDFDALFFG-ISPREAEAMDPQQRLLLEVAWEALEDAGIYPD---SLRGSATGV 120
Query: 268 LIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTAC 327
G+ + + + + ++++ + ++ LG GP+ ++ TAC
Sbjct: 121 FAGASVAD--YLLLLLADDEAE----PEYAITGNSSSVAAGRISYVLGLSGPSVTVDTAC 174
Query: 328 ATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWD 387
++S + A + GE ++ L GG + + P F A LS P + +D
Sbjct: 175 SSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLS-----PDGRCKAFD 229
Query: 388 INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCI 447
+ DG+V GEGAGV++L+ L A++ G +IYA RG + D P+ I
Sbjct: 230 ADADGYVRGEGAGVVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPNLEAQADVI 289
Query: 448 EKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRG---LRVNSTKSMIGHL 504
+ALA +G+ V Y+ AH T TP GD E AL +G+ + S KS IGHL
Sbjct: 290 REALADAGIDPATVQYVEAHGTGTPLGDPIEANALGAVYGEGAPAQPCAIGSVKSNIGHL 349
Query: 505 LGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD---TNVLV----GPKKERLEVKAAL 557
AAG I A++ G+I P ++ + P+ +D + +V P + A
Sbjct: 350 EAAAGIAGLIKTALALKHGYIPPTLHFDTPNPEIDFDSSPFVVPTEATPWPTGGGPRRAG 409
Query: 558 SNSFGFGGHNSSIIFSPY 575
+SFGFGG N+ +I
Sbjct: 410 VSSFGFGGTNAHVILEEA 427
|
Length = 1061 |
| >gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 122 bits (308), Expect = 1e-31
Identities = 81/304 (26%), Positives = 117/304 (38%), Gaps = 68/304 (22%)
Query: 275 GMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAM------LAMDLGWM-GPNYSISTAC 327
G + AI +S + V TT LA LG GP YS++ AC
Sbjct: 11 GFEAAEQAIADAGLSKGPIVGVIV--GTTGGSGEFSGAAGQLAYHLGISGGPAYSVNQAC 68
Query: 328 ATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWD 387
AT + A + G+A+++L GGS+
Sbjct: 69 ATGLTALALAVQQVQNGKADIVLAGGSEE------------------------------- 97
Query: 388 INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCI 447
FV G+GA ++E EHA +RGA AE + T D M P G G+
Sbjct: 98 -----FVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASM-VPAVSGEGLARAA 151
Query: 448 EKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGA 507
KAL +G++ D++Y+ AH T TP GD E + G R V++T M GH LGA
Sbjct: 152 RKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGV-RSPAVSATLIMTGHPLGA 210
Query: 508 AGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHN 567
AG ++ + +I P E + L FG GG N
Sbjct: 211 AGLAILDELLLMLEHEFIPPT---------------------PREPRTVLLLGFGLGGTN 249
Query: 568 SSII 571
++++
Sbjct: 250 AAVV 253
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254 |
| >gnl|CDD|234022 TIGR02813, omega_3_PfaA, polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Score = 111 bits (278), Expect = 3e-25
Identities = 108/395 (27%), Positives = 168/395 (42%), Gaps = 59/395 (14%)
Query: 226 PKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMK-------- 277
P + + D L L K+ L D G+ + D+ K G+ +G G GG K
Sbjct: 84 PNILELTDISQLLSLVVAKEVLNDAGLPDG----YDRDKIGITLGVG-GGQKQSSSLNAR 138
Query: 278 --------VFYDA----------IEALRISYKKMNPFCVPFATTNMGSAMLA--MDLGWM 317
VF + I+ + Y P + N+ S +A DLG
Sbjct: 139 LQYPVLKKVFKASGVEDEDSEMLIKKFQDQYIHWEENSFPGSLGNVISGRIANRFDLG-- 196
Query: 318 GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNN 377
G N + ACA S I A + ++ G + +M+ GG P F A +
Sbjct: 197 GMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMYMSFSKTPAFTT--- 253
Query: 378 DPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMT--E 435
+ +P+DI+ G ++GEG G++ L+ LE A++ G +IYA +G +SD +
Sbjct: 254 --NEDIQPFDIDSKGMMIGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKFKSIYA 311
Query: 436 PHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN----RG 491
P P+G L ++A +G + I AH T T AGD+ E+ L+ F Q+ +
Sbjct: 312 PRPEGQAKAL--KRAYDDAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQH 369
Query: 492 LRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDT-------NVLV 544
+ + S KS IGH AG I V A+ + P IN++ P+ +D N
Sbjct: 370 IALGSVKSQIGHTKSTAGTAGMIKAVLALHHKVLPPTINVDQPNPKLDIENSPFYLNTET 429
Query: 545 GPKKER---LEVKAALSNSFGFGGHNSSIIFSPYK 576
P +R +A +S SFGFGG N ++ Y
Sbjct: 430 RPWMQREDGTPRRAGIS-SFGFGGTNFHMVLEEYS 463
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. Length = 2582 |
| >gnl|CDD|214836 smart00825, PKS_KS, Beta-ketoacyl synthase | Back alignment and domain information |
|---|
Score = 93.5 bits (234), Expect = 4e-21
Identities = 74/264 (28%), Positives = 108/264 (40%), Gaps = 62/264 (23%)
Query: 317 MGPNYSIS--TACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQ 374
+YS++ TAC++S + A + GE ++ L GG + + P G LS
Sbjct: 85 SSSDYSVTVDTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGLSRAGMLS- 143
Query: 375 RNNDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMT 434
P + +D + DG+V GEG GV++L+ L A + G I
Sbjct: 144 ----PDGRCKTFDASADGYVRGEGVGVVVLKRLSDALRDGDPIL---------------- 183
Query: 435 EPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRV 494
VI A+ G S N I A P+G Q L +
Sbjct: 184 -------AVIR--GSAVNQDGRS----NGITA-----PSGP-----------AQ---LLI 211
Query: 495 NSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD---TNVLV----GPK 547
S KS IGHL AAG I VV A++ G I P ++ E P+ +D + + V P
Sbjct: 212 GSVKSNIGHLEAAAGVAGLIKVVLALKHGVIPPTLHFETPNPHIDLEESPLRVPTELTPW 271
Query: 548 KERLEVKAALSNSFGFGGHNSSII 571
+ A +SFGFGG N+ +I
Sbjct: 272 PPPGRPRRAGVSSFGFGGTNAHVI 295
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. Length = 298 |
| >gnl|CDD|238425 cd00829, SCP-x_thiolase, Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Score = 48.0 bits (115), Expect = 7e-06
Identities = 48/322 (14%), Positives = 87/322 (27%), Gaps = 106/322 (32%)
Query: 227 KLSKRMDK-FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEA 285
+R D+ + A + AL D G+ I+A
Sbjct: 7 PFGRRSDRSPLELAAEAARAALDDAGLE--------------------------PADIDA 40
Query: 286 LRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGE 345
+ + + G+ + P + A A+ + + AA I G
Sbjct: 41 VVVGN-----AAGGRFQSFPGALIAEYLGLLGKPATRVEAAGASGSAAVRAAAAAIASGL 95
Query: 346 ANVMLCGGSDA--------------------------AVIPIGLGGFVACR--------- 370
A+V+L G++ + P L A R
Sbjct: 96 ADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALAARRYMHRYGTTR 155
Query: 371 ------ALSQRNN---------------DPTKASRP-------WDINRDGFVMGEGAGVL 402
A+ N + SR D + +GA +
Sbjct: 156 EDLAKVAVKNHRNAARNPYAQFRKPITVEDVLNSRMIADPLRLLDCC----PVSDGAAAV 211
Query: 403 LLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGV--GVILCIEKALAHSGVSRED 460
+L E A++ + G SD ++E L +A +G++ +D
Sbjct: 212 VLASEERARELTDR-PVWILGVGAASDTPSLSERDDFLSLDAARLAARRAYKMAGITPDD 270
Query: 461 VNYINAHATSTPAGDIKEYQAL 482
++ + T I E AL
Sbjct: 271 IDVAELYDCFT----IAELLAL 288
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. Length = 375 |
| >gnl|CDD|235819 PRK06519, PRK06519, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 4e-05
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 18/93 (19%)
Query: 336 NAANHIIRGEANVMLCGGSDAA-----VIPIGLGGFVA---CRALSQRNNDPTKASRPWD 387
A I G+++ L GG+ A ++ LGG + + R +
Sbjct: 184 IAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKGGWAPVWSRGGEDG------- 236
Query: 388 INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAE 420
GF++G G L+LE EHA+ RGA+ YA
Sbjct: 237 ---GGFILGSGGAFLVLESREHAEARGARPYAR 266
|
Length = 398 |
| >gnl|CDD|181597 PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 2e-04
Identities = 19/44 (43%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 321 YSISTACATSNFCILNAANHIIRGEANVMLCGGSD-AAVIPIGL 363
YS+S ACATS + N A I+ G ++ + GG+D ++V+PIG+
Sbjct: 85 YSVSRACATSFQAVANVAESIMAGTIDIGIAGGADSSSVLPIGV 128
|
Length = 428 |
| >gnl|CDD|238383 cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Score = 40.2 bits (95), Expect = 0.003
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 398 GAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVS 457
GA +LL E AK+ G K A G + +P G+G + I KAL +G++
Sbjct: 247 GAAAVLLMSEEKAKELGLKPLARIVGYAVAGV-----DPAIMGIGPVPAIPKALKRAGLT 301
Query: 458 REDVNYI 464
+D++ I
Sbjct: 302 LDDIDLI 308
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 386 |
| >gnl|CDD|181626 PRK09052, PRK09052, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 0.003
Identities = 38/134 (28%), Positives = 56/134 (41%), Gaps = 23/134 (17%)
Query: 395 MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHS 454
+GAG ++L + K+ A F SF P G+G I I AL +
Sbjct: 256 TSDGAGAVILVSEKALKQFNLTPLARFV--SFAVAG---VPPEIMGIGPIEAIPAALKQA 310
Query: 455 GVSREDVNYIN---AHATSTPAGDIKEYQAL--IHCFGQNRGLRVNSTKSMI--GHLLGA 507
G+ ++D+++I A A Q+L I G + +VN I GH LGA
Sbjct: 311 GLKQDDLDWIELNEAFAA----------QSLAVIRDLGLDPS-KVNPLGGAIALGHPLGA 359
Query: 508 AGAVEAIAVVQAIR 521
GA+ VV +R
Sbjct: 360 TGAIRTATVVHGLR 373
|
Length = 399 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 576 | |||
| PLN02787 | 540 | 3-oxoacyl-[acyl-carrier-protein] synthase II | 100.0 | |
| KOG1394 | 440 | consensus 3-oxoacyl-(acyl-carrier-protein) synthas | 100.0 | |
| PRK08722 | 414 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK06333 | 424 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| COG0304 | 412 | FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li | 100.0 | |
| PRK07910 | 418 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| cd00832 | 399 | CLF Chain-length factor (CLF) is a factor required | 100.0 | |
| COG3321 | 1061 | Polyketide synthase modules and related proteins [ | 100.0 | |
| PRK07314 | 411 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK08439 | 406 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 100.0 | |
| PRK07967 | 406 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 100.0 | |
| PRK09116 | 405 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PLN02836 | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase | 100.0 | |
| TIGR03150 | 407 | fabF beta-ketoacyl-acyl-carrier-protein synthase I | 100.0 | |
| cd00834 | 406 | KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) | 100.0 | |
| PRK07103 | 410 | polyketide beta-ketoacyl:acyl carrier protein synt | 100.0 | |
| PTZ00050 | 421 | 3-oxoacyl-acyl carrier protein synthase; Provision | 100.0 | |
| cd00828 | 407 | elong_cond_enzymes "elongating" condensing enzymes | 100.0 | |
| PRK05952 | 381 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK06501 | 425 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK14691 | 342 | 3-oxoacyl-(acyl carrier protein) synthase II; Prov | 100.0 | |
| smart00825 | 424 | PKS_KS Beta-ketoacyl synthase. The structure of be | 100.0 | |
| cd00833 | 421 | PKS polyketide synthases (PKSs) polymerize simple | 100.0 | |
| PRK09185 | 392 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 100.0 | |
| PRK06519 | 398 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 100.0 | |
| cd00825 | 332 | decarbox_cond_enzymes decarboxylating condensing e | 100.0 | |
| PRK06147 | 348 | 3-oxoacyl-(acyl carrier protein) synthase; Validat | 100.0 | |
| PF00109 | 254 | ketoacyl-synt: Beta-ketoacyl synthase, N-terminal | 100.0 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 99.97 | |
| PRK05656 | 393 | acetyl-CoA acetyltransferase; Provisional | 99.94 | |
| PRK06064 | 389 | acetyl-CoA acetyltransferase; Provisional | 99.93 | |
| cd00751 | 386 | thiolase Thiolase are ubiquitous enzymes that cata | 99.93 | |
| PRK06633 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.92 | |
| TIGR01930 | 386 | AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi | 99.92 | |
| PRK09051 | 394 | beta-ketothiolase; Provisional | 99.92 | |
| PF02801 | 119 | Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina | 99.92 | |
| PRK05790 | 393 | putative acyltransferase; Provisional | 99.92 | |
| PRK12578 | 385 | acetyl-CoA acetyltransferase; Provisional | 99.91 | |
| PRK07108 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.91 | |
| PRK13359 | 400 | beta-ketoadipyl CoA thiolase; Provisional | 99.91 | |
| PRK08242 | 402 | acetyl-CoA acetyltransferase; Validated | 99.91 | |
| PRK09052 | 399 | acetyl-CoA acetyltransferase; Provisional | 99.91 | |
| TIGR02430 | 400 | pcaF beta-ketoadipyl CoA thiolase. Members of this | 99.91 | |
| PRK06445 | 394 | acetyl-CoA acetyltransferase; Provisional | 99.91 | |
| PLN02287 | 452 | 3-ketoacyl-CoA thiolase | 99.91 | |
| PRK07661 | 391 | acetyl-CoA acetyltransferase; Provisional | 99.91 | |
| PRK07516 | 389 | acetyl-CoA acetyltransferase; Provisional | 99.9 | |
| PRK06205 | 404 | acetyl-CoA acetyltransferase; Provisional | 99.9 | |
| PRK07851 | 406 | acetyl-CoA acetyltransferase; Provisional | 99.9 | |
| PRK08947 | 387 | fadA 3-ketoacyl-CoA thiolase; Reviewed | 99.9 | |
| PLN02644 | 394 | acetyl-CoA C-acetyltransferase | 99.9 | |
| TIGR02445 | 385 | fadA fatty oxidation complex, beta subunit FadA. T | 99.9 | |
| PRK07850 | 387 | acetyl-CoA acetyltransferase; Provisional | 99.9 | |
| cd00829 | 375 | SCP-x_thiolase Thiolase domain associated with ste | 99.9 | |
| PRK06954 | 397 | acetyl-CoA acetyltransferase; Provisional | 99.9 | |
| PRK08235 | 393 | acetyl-CoA acetyltransferase; Provisional | 99.89 | |
| PRK09050 | 401 | beta-ketoadipyl CoA thiolase; Validated | 99.89 | |
| PRK08131 | 401 | acetyl-CoA acetyltransferase; Provisional | 99.89 | |
| PRK08256 | 391 | lipid-transfer protein; Provisional | 99.89 | |
| PTZ00455 | 438 | 3-ketoacyl-CoA thiolase; Provisional | 99.89 | |
| PRK06366 | 388 | acetyl-CoA acetyltransferase; Provisional | 99.88 | |
| PRK07801 | 382 | acetyl-CoA acetyltransferase; Provisional | 99.88 | |
| PRK06059 | 399 | lipid-transfer protein; Provisional | 99.88 | |
| PRK06504 | 390 | acetyl-CoA acetyltransferase; Provisional | 99.88 | |
| PRK06158 | 384 | thiolase; Provisional | 99.88 | |
| PRK08313 | 386 | acetyl-CoA acetyltransferase; Provisional | 99.88 | |
| PRK08963 | 428 | fadI 3-ketoacyl-CoA thiolase; Reviewed | 99.88 | |
| PRK06157 | 398 | acetyl-CoA acetyltransferase; Validated | 99.88 | |
| PRK06065 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.87 | |
| PRK06289 | 403 | acetyl-CoA acetyltransferase; Provisional | 99.87 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 99.87 | |
| PRK08142 | 388 | acetyl-CoA acetyltransferase; Provisional | 99.87 | |
| PRK06365 | 430 | acetyl-CoA acetyltransferase; Provisional | 99.87 | |
| cd00826 | 393 | nondecarbox_cond_enzymes nondecarboxylating conden | 99.86 | |
| PRK06025 | 417 | acetyl-CoA acetyltransferase; Provisional | 99.85 | |
| TIGR02446 | 430 | FadI fatty oxidation complex, beta subunit FadI. T | 99.85 | |
| PRK06066 | 385 | acetyl-CoA acetyltransferase; Provisional | 99.84 | |
| PRK07515 | 372 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.83 | |
| PRK09268 | 427 | acetyl-CoA acetyltransferase; Provisional | 99.83 | |
| PRK06690 | 361 | acetyl-CoA acetyltransferase; Provisional | 99.83 | |
| PRK07937 | 352 | lipid-transfer protein; Provisional | 99.78 | |
| KOG1390 | 396 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 99.78 | |
| PRK07204 | 329 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.77 | |
| PRK07855 | 386 | lipid-transfer protein; Provisional | 99.77 | |
| PRK08257 | 498 | acetyl-CoA acetyltransferase; Validated | 99.76 | |
| PRK09352 | 319 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.76 | |
| COG0332 | 323 | FabH 3-oxoacyl-[acyl-carrier-protein] | 99.75 | |
| KOG1406 | 408 | consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44 | 99.75 | |
| PRK06816 | 378 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.73 | |
| TIGR00747 | 318 | fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | 99.71 | |
| PRK09258 | 338 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.7 | |
| PRK12879 | 325 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.69 | |
| cd00830 | 320 | KAS_III Ketoacyl-acyl carrier protein synthase III | 99.68 | |
| PLN02326 | 379 | 3-oxoacyl-[acyl-carrier-protein] synthase III | 99.65 | |
| KOG1389 | 435 | consensus 3-oxoacyl CoA thiolase [Lipid transport | 99.65 | |
| CHL00203 | 326 | fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr | 99.63 | |
| KOG1391 | 396 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 99.62 | |
| PRK06840 | 339 | hypothetical protein; Validated | 99.59 | |
| cd00827 | 324 | init_cond_enzymes "initiating" condensing enzymes | 99.57 | |
| PRK05963 | 326 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.54 | |
| TIGR00748 | 345 | HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase | 99.54 | |
| PRK04262 | 347 | hypothetical protein; Provisional | 99.5 | |
| PLN03172 | 393 | chalcone synthase family protein; Provisional | 99.47 | |
| cd00831 | 361 | CHS_like Chalcone and stilbene synthases; plant-sp | 99.45 | |
| PRK12880 | 353 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.44 | |
| KOG1392 | 465 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 99.41 | |
| COG0183 | 392 | PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis | 99.39 | |
| PLN03170 | 401 | chalcone synthase; Provisional | 99.37 | |
| PLN03169 | 391 | chalcone synthase family protein; Provisional | 99.35 | |
| PLN03171 | 399 | chalcone synthase-like protein; Provisional | 99.34 | |
| PLN03173 | 391 | chalcone synthase; Provisional | 99.31 | |
| TIGR02845 | 327 | spore_V_AD stage V sporulation protein AD. Bacillu | 99.3 | |
| PLN03168 | 389 | chalcone synthase; Provisional | 99.24 | |
| PLN02854 | 521 | 3-ketoacyl-CoA synthase | 99.18 | |
| PRK08304 | 337 | stage V sporulation protein AD; Validated | 99.13 | |
| PF00108 | 264 | Thiolase_N: Thiolase, N-terminal domain; InterPro: | 99.12 | |
| TIGR01835 | 379 | HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt | 99.11 | |
| PLN02377 | 502 | 3-ketoacyl-CoA synthase | 99.07 | |
| PF02803 | 123 | Thiolase_C: Thiolase, C-terminal domain; InterPro: | 98.99 | |
| PLN02577 | 459 | hydroxymethylglutaryl-CoA synthase | 98.95 | |
| COG3425 | 377 | PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi | 98.86 | |
| PRK12404 | 334 | stage V sporulation protein AD; Provisional | 98.84 | |
| PLN02932 | 478 | 3-ketoacyl-CoA synthase | 98.84 | |
| TIGR01833 | 454 | HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth | 98.78 | |
| PF13723 | 218 | Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina | 98.76 | |
| PLN02192 | 511 | 3-ketoacyl-CoA synthase | 98.65 | |
| COG3424 | 356 | BcsA Predicted naringenin-chalcone synthase [Secon | 98.38 | |
| PF08392 | 290 | FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- | 98.38 | |
| PLN00415 | 466 | 3-ketoacyl-CoA synthase | 98.33 | |
| PF00195 | 226 | Chal_sti_synt_N: Chalcone and stilbene synthases, | 97.88 | |
| PF08545 | 80 | ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP) | 97.88 | |
| PRK06060 | 705 | acyl-CoA synthetase; Validated | 97.71 | |
| PF07451 | 329 | SpoVAD: Stage V sporulation protein AD (SpoVAD); I | 97.63 | |
| PF00550 | 67 | PP-binding: Phosphopantetheine attachment site; In | 97.08 | |
| PF01154 | 174 | HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s | 96.77 | |
| PF08541 | 90 | ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC | 96.48 | |
| PRK00982 | 78 | acpP acyl carrier protein; Provisional | 95.41 | |
| smart00823 | 86 | PKS_PP Phosphopantetheine attachment site. Phospho | 95.34 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 92.52 | |
| CHL00124 | 82 | acpP acyl carrier protein; Validated | 92.31 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 89.23 | |
| PRK09184 | 89 | acyl carrier protein; Provisional | 88.8 | |
| PRK12449 | 80 | acyl carrier protein; Provisional | 88.44 | |
| PRK12467 | 3956 | peptide synthase; Provisional | 86.19 | |
| TIGR00517 | 77 | acyl_carrier acyl carrier protein. S (Ser) at posi | 85.44 | |
| PRK12316 | 5163 | peptide synthase; Provisional | 85.21 | |
| PRK05883 | 91 | acyl carrier protein; Validated | 84.58 | |
| PRK07081 | 83 | acyl carrier protein; Provisional | 84.31 | |
| PRK05350 | 82 | acyl carrier protein; Provisional | 83.27 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 82.71 | |
| PRK12467 | 3956 | peptide synthase; Provisional | 82.6 | |
| PRK05691 | 4334 | peptide synthase; Validated | 82.52 | |
| PRK12578 | 385 | acetyl-CoA acetyltransferase; Provisional | 80.64 |
| >PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-97 Score=804.81 Aligned_cols=540 Identities=81% Similarity=1.274 Sum_probs=472.0
Q ss_pred CCcCcccchhhHHHHHHhhhcccCCCCCCCCCcccccccccccccchHHHHhhhhccccCCccccCCccccccCCCchhh
Q 008146 2 ASSCSFTSPLCTWLVAACMSFTCGSRDPHQPPSVLRRYTNNKREGLSAARRRKLSAKCGVGGEVVNGSLVSSFSGSSHSI 81 (576)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (576)
|+++++++|||||||+||||++|+++.+..... .+..+|.+|||+....|+. ++++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~---------------~~~~~ 57 (540)
T PLN02787 1 MASASAASPLCTWLVAACMSVSCAGEDAHQAVA--------LQSGGRSRRRRKRRKCSSA---------------SGSAS 57 (540)
T ss_pred CcccccchhHHHHHHHHHhhhhhccCCCccccc--------cccccccchhhhhhhhccc---------------cccch
Confidence 688999999999999999999999877744331 1334432222221112222 45566
Q ss_pred hHhhhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHHhhhcccccccccccccCCCCccccccCCCC
Q 008146 82 QSLMASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRRLRLNRVTRSGEAMAVAVQPDEEVTTKKKPH 161 (576)
Q Consensus 82 ~~~~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 161 (576)
+++ ..++..|+|+.+....|- ....+|+.+... ..+.+++ ..+....++.++...+|.+...+.+.+.
T Consensus 58 ~~~-~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (540)
T PLN02787 58 ILV-TSCLAFGPCTHYNSSGGN-------ALSSLFGSNSVS--LNRNQRR--RNRAARSGKAMAVAVQPEKEVETKKKPL 125 (540)
T ss_pred hhc-cchhcccchhhccccccc-------cccccccCCCcc--ccccccc--ccccCCCcccceeccCcccccccccCCC
Confidence 544 235555999999888552 233467777654 5666666 6666677777777777766555555555
Q ss_pred CCCCcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHH
Q 008146 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLT 241 (576)
Q Consensus 162 ~~~~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~ 241 (576)
++.++|||||||+++|.|.++++||++|.+|+++|+++++|+...++.++++++++|+++.|+++++.++||+++++++.
T Consensus 126 ~~~~rVvITG~G~vtp~G~~~~~~w~~L~~G~s~i~~~~~f~~~~~~~~~ag~i~~f~~~~~l~~k~~r~md~~~~~al~ 205 (540)
T PLN02787 126 TKQRRVVVTGMGVVSPLGHDPDVFYNNLLEGVSGISEIERFDCSQFPTRIAGEIKSFSTDGWVAPKLSKRMDKFMLYLLT 205 (540)
T ss_pred CCCCCEEEEeeEEECCCCCCHHHHHHHHHcCCCcccccCccchhhCCccccccccccChhhcCCHHHHHhCCHHHHHHHH
Confidence 66789999999999999999999999999999999999999999999999999999999989999999999999999999
Q ss_pred HHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCCCCccc
Q 008146 242 AGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNY 321 (576)
Q Consensus 242 aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~ 321 (576)
++++||+|||++++.++.+++.|+|||+|+..+++..+.++++.++..+++++|+.++..+.|+.++++++.||++||++
T Consensus 206 Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~~gl~Gp~~ 285 (540)
T PLN02787 206 AGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNY 285 (540)
T ss_pred HHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHHhCCCCCcc
Confidence 99999999999865344567889999999999998888887777766677889998898999999999999999999999
Q ss_pred cccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceEE
Q 008146 322 SISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGV 401 (576)
Q Consensus 322 tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAaa 401 (576)
+|+++|+|++.||..|+++|++|++|+|||||+|..++|..+.+|..++.|++.+.+|++.|||||.++|||++|||+++
T Consensus 286 tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD~~rdGfv~GEGAa~ 365 (540)
T PLN02787 286 SISTACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDMNRDGFVMGEGAGV 365 (540)
T ss_pred ccccccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCcccCCCCcccccceEE
Confidence 99999999999999999999999999999999999999999999999999998888899999999999999999999999
Q ss_pred EEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHH
Q 008146 402 LLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQA 481 (576)
Q Consensus 402 lvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~A 481 (576)
+|||++++|++||++||++|+|++.++|++|++.|+|++.++.++|++||+++|++|+||||||+|||||+.+|..|.++
T Consensus 366 lVLE~~e~A~~rGa~IyA~I~G~g~s~Da~~~t~p~p~g~g~~~am~~AL~~AGl~p~dIdyInaHGTGT~~gD~~E~~A 445 (540)
T PLN02787 366 LLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQA 445 (540)
T ss_pred EEEeeHHHHHHCCCeeEEEEEEEEEecCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHHHCcEEEccCccCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEecc
Q 008146 482 LIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSF 561 (576)
Q Consensus 482 l~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sf 561 (576)
|.++|+...+++|+++|+++||++||+|++++++++++|++|+|||++|+++|++.++.++++.+.+++++++++++|||
T Consensus 446 i~~~Fg~~~~~pV~S~Ks~iGH~~gAAGa~eli~~~lal~~g~iPPt~n~~~pd~~~~~~~~v~~~~~~~~ir~aL~nSf 525 (540)
T PLN02787 446 LMRCFGQNPELRVNSTKSMIGHLLGAAGAVEAIATVQAIRTGWVHPNINLENPESGVDTKVLVGPKKERLDIKVALSNSF 525 (540)
T ss_pred HHHHhCCCCCceeeCCCCCcCCCcccchHHHHHHHHHHHhcCCcCCCCCCCCCCccCCcccccccccccCCcCEEEEeee
Confidence 99999976668999999999999999999999999999999999999999999999998876655566667999999999
Q ss_pred CCCcceeEEEEeeCC
Q 008146 562 GFGGHNSSIIFSPYK 576 (576)
Q Consensus 562 G~gG~na~vil~~~~ 576 (576)
||||+|+++||++|+
T Consensus 526 GFGG~Naslvl~~~~ 540 (540)
T PLN02787 526 GFGGHNSSILFAPYK 540 (540)
T ss_pred cCCceeEEEEEEeCC
Confidence 999999999999986
|
|
| >KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-89 Score=674.50 Aligned_cols=413 Identities=52% Similarity=0.832 Sum_probs=394.8
Q ss_pred CCcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 008146 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 243 (576)
Q Consensus 164 ~~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa 243 (576)
++||||||||+++|.|.++.++|++|.+|+++|+.++.++...+|..+.++|+.|+...|+++...++|++..+|++.++
T Consensus 23 ~rRVVITGmG~VTplG~~v~~~w~~Ll~GesGI~~l~~~d~k~~p~~v~g~Ip~f~~e~~~s~~~~r~ms~~~~~al~aa 102 (440)
T KOG1394|consen 23 MRRVVITGMGAVTPLGNGVHTSWRNLLSGESGISSLEGPDYKSIPFTVAGKIPRFSVEDYVSKGDERRMSKFTKLALTAA 102 (440)
T ss_pred ceeEEEeccceeecCCCChHHHHHHhhccccCcccccccccccCcchheeeccccccccccchhhhhhhhHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHH-hhhccCCCccccccccchhHHHHHHHhCCCCcccc
Q 008146 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALR-ISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYS 322 (576)
Q Consensus 244 ~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~t 322 (576)
.|||+|+|+.+..+++.+..++||.+|++++++..+.+....+. .++++++|+++|..+.||.++++++.+||+||+++
T Consensus 103 ~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm~~gl~Gpnhs 182 (440)
T KOG1394|consen 103 EEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSMKYGLRGPNHS 182 (440)
T ss_pred HHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhhhhcCcCCchh
Confidence 99999999998767788899999999999999999998777775 45999999999999999999999999999999999
Q ss_pred ccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceEEE
Q 008146 323 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 402 (576)
Q Consensus 323 v~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAaal 402 (576)
++|+|++|..+|..|.+.|+.|++|++|+||+|..++|..+.+|.+++.|++++++|...+||||.++||||+|||+|++
T Consensus 183 vSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD~~RdGFVmGEGagvl 262 (440)
T KOG1394|consen 183 VSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFDKKRDGFVMGEGAGVL 262 (440)
T ss_pred hHhhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCCCccCCCceeeccceeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHH
Q 008146 403 LLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQAL 482 (576)
Q Consensus 403 vL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al 482 (576)
|||++|+|++||++||++|.|+++++|.+|++.|.|++.+...+|+++|++||+.|+||+||++|+|+|++||..|.+|+
T Consensus 263 vlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~~dG~Ga~~am~raL~~Agl~pe~i~YvNAHATST~~GD~aE~~Ai 342 (440)
T KOG1394|consen 263 VLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPDPDGAGAVLAMERALKDAGLSPEDIDYVNAHATSTPLGDAAEAEAI 342 (440)
T ss_pred ehHhHHHHHHcCCceeHHhhcCcccccccccCCCCCCcchHHHHHHHHHHHcCCChhhcCeeecccccCcCchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCc-ccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCccc---ccCCcccccCccEEEE
Q 008146 483 IHCFGQNRGL-RVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNV---LVGPKKERLEVKAALS 558 (576)
Q Consensus 483 ~~~f~~~~~~-~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~---~~~~~~~~~~~~~alv 558 (576)
+++|+++... +|.|+|+.|||.+||+|.++.+..+++++++++||++|+++|++.+|.++ .+.++.....+|++++
T Consensus 343 ~~vf~~~~~~~~vsStKgaiGHLLGAAGavEAi~Tv~ai~~~~lpptlNlen~d~~~d~~~~~~~~~~~~~~~~~~vals 422 (440)
T KOG1394|consen 343 KRVFGEHNIASKVSSTKGAIGHLLGAAGAVEAIFTVLAINDGVLPPTLNLENPDPGVDLDYVPLKASEKKGGNKVRVALS 422 (440)
T ss_pred HHHhccCCcccccccccchhhhhcccccchhhHhhhhhhhcCccCCcccccCCCccccccccccccccccccccceEEEe
Confidence 9999987544 79999999999999999999999999999999999999999999988874 3334444466899999
Q ss_pred eccCCCcceeEEEEeeCC
Q 008146 559 NSFGFGGHNSSIIFSPYK 576 (576)
Q Consensus 559 ~sfG~gG~na~vil~~~~ 576 (576)
|||||||+|++++|.+|+
T Consensus 423 NSFGFGGtNaSl~fa~~~ 440 (440)
T KOG1394|consen 423 NSFGFGGTNASLCFAKFK 440 (440)
T ss_pred cccccCCcchhheeeecC
Confidence 999999999999999986
|
|
| >PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-78 Score=648.06 Aligned_cols=409 Identities=45% Similarity=0.771 Sum_probs=379.5
Q ss_pred CCCcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHH
Q 008146 163 KQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTA 242 (576)
Q Consensus 163 ~~~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~a 242 (576)
+.++|||||||+++|.|.++++||++|.+|+++|+++++|+...++..+++++++||++.|+++++.+.||+++++++.+
T Consensus 2 ~~~~VvItG~g~~~p~g~~~~~~w~~L~~g~s~i~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~d~~~~~~l~a 81 (414)
T PRK08722 2 SKRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKDFNCEEYMSKKDARKMDLFIQYGIAA 81 (414)
T ss_pred CCCCEEEEeeEEECCCCCCHHHHHHHHHhCCCeeeecCccccccCCCceeEEcCCCChhHcCCHHHHhhcCHHHHHHHHH
Confidence 35789999999999999999999999999999999999999988988999999999998889999999999999999999
Q ss_pred HHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHH-hhhccCCCccccccccchhHHHHHHHhCCCCccc
Q 008146 243 GKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALR-ISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNY 321 (576)
Q Consensus 243 a~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~ 321 (576)
+++||+|||++++ ..+..|+|||+|++.+++....++++.+. ...+.++|+.++..+.|.+++++++.||++||++
T Consensus 82 ~~~Al~dAGl~~~---~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl~Gp~~ 158 (414)
T PRK08722 82 GIQALDDSGLEVT---EENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNI 158 (414)
T ss_pred HHHHHHHcCCCcc---ccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCCCCCcc
Confidence 9999999999764 45678999999999998887777666553 3456778888999999999999999999999999
Q ss_pred cccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceEE
Q 008146 322 SISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGV 401 (576)
Q Consensus 322 tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAaa 401 (576)
+|+++|+|++.||+.|+++|++|++|+|||||+|...++..+.+|..++.|+..+.+|+..|||||.+++|+++|||+++
T Consensus 159 ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~~G~~~gEGaaa 238 (414)
T PRK08722 159 AISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGDGAGM 238 (414)
T ss_pred ccccccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcCCCCceEeeceEEE
Confidence 99999999999999999999999999999999999999999999999999987777789999999999999999999999
Q ss_pred EEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHH
Q 008146 402 LLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQA 481 (576)
Q Consensus 402 lvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~A 481 (576)
+|||++++|+++|++||++|+|++.++|+++++.|.+.+.++.++|+++|+++|++|+||||||+|||||+.+|..|.++
T Consensus 239 lvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~a 318 (414)
T PRK08722 239 MVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEIKG 318 (414)
T ss_pred EEEccHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEEccCccCCCCCHHHHHH
Confidence 99999999999999999999999999999999999888888999999999999999999999999999999999999999
Q ss_pred HHHHHcCC--CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccc-CccEEEE
Q 008146 482 LIHCFGQN--RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERL-EVKAALS 558 (576)
Q Consensus 482 l~~~f~~~--~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~-~~~~alv 558 (576)
|+++|+.. .+++|+++|+++||+++|+|++++++++++|++|+|||++|+++|++.++++++... .+.+ .++++++
T Consensus 319 l~~~fg~~~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~~~v~~~-~~~~~~~~~~l~ 397 (414)
T PRK08722 319 IKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITVMSLVDQIVPPTINLDDPEEGLDIDLVPHT-ARKVESMEYAIC 397 (414)
T ss_pred HHHHhcccCCCCceeeCcccccccchHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCCCc-cccCCCCCEEEE
Confidence 99999864 468999999999999999999999999999999999999999999999888765432 3332 5899999
Q ss_pred eccCCCcceeEEEEeeC
Q 008146 559 NSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 559 ~sfG~gG~na~vil~~~ 575 (576)
|||||||+|+|+||++.
T Consensus 398 nsfGfGG~n~~lvl~~~ 414 (414)
T PRK08722 398 NSFGFGGTNGSLIFKKM 414 (414)
T ss_pred ecccCCCceEEEEEecC
Confidence 99999999999999863
|
|
| >PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-76 Score=637.50 Aligned_cols=411 Identities=45% Similarity=0.748 Sum_probs=378.4
Q ss_pred CCCCcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccC--------CCCCCCCChhhhhcCC
Q 008146 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKS--------FSTDGWVAPKLSKRMD 233 (576)
Q Consensus 162 ~~~~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~--------fd~~~~i~~~~a~~md 233 (576)
|.+++|+|||||+++|.|.++++||++|++|+++|++++.|+...++...++++++ ||++.|+++++.+.||
T Consensus 1 m~~~~V~ItG~g~~~p~g~~~~~~w~~l~~G~s~i~~~~~~~~~~~~~~~~g~i~~~~~~~~~~fd~~~~i~~~~~~~~d 80 (424)
T PRK06333 1 MNKKRIVVTGMGAVSPLGCGVETFWQRLLAGQSGIRTLTDFPVGDLATKIGGQVPDLAEDAEAGFDPDRYLDPKDQRKMD 80 (424)
T ss_pred CCCCCEEEEcceEECCCCCCHHHHHHHHHcCCCeEEeCCcccccCCCCceEEEeccccccccccCChhHcCCHHHHhhcC
Confidence 45678999999999999999999999999999999999998888888888888877 8888889999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCChhhhhcc-cCCeeEEEEcccCCchhHHHHHHHHH-HhhhccCCCccccccccchhHHHHH
Q 008146 234 KFMLYLLTAGKKALADGGITEDVMNEL-DKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLA 311 (576)
Q Consensus 234 p~~rl~l~aa~eAL~dAGi~~~~i~~~-~~~r~gV~vG~~~g~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~a~~ia 311 (576)
|+++|++.++++||+|+|++++ .+ +..++|||+|++.+++..+.+++..+ ......++|+.++..+.|..+++|+
T Consensus 81 ~~~~l~~~aa~~Al~dAgl~~~---~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is 157 (424)
T PRK06333 81 RFILFAMAAAKEALAQAGWDPD---TLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVS 157 (424)
T ss_pred HHHHHHHHHHHHHHHhcCCCcc---ccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHH
Confidence 9999999999999999999875 33 67899999999999888777766655 3344566788888888999999999
Q ss_pred HHhCCCCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhcc-CCCCCCCCCCCccCC
Q 008146 312 MDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR-NNDPTKASRPWDINR 390 (576)
Q Consensus 312 ~~lgl~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~-~~~p~~~~rpfd~~~ 390 (576)
+.|||+||+++|+++|+||+.||+.|+++|++|++|++||||+|.++++..+..|..++.++.. +.+|+..|||||.++
T Consensus 158 ~~~gl~Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~~Pfd~~~ 237 (424)
T PRK06333 158 IRYGFKGPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDRDR 237 (424)
T ss_pred HHhCCCCCCccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999988899999998864 567888999999999
Q ss_pred CcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q 008146 391 DGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATS 470 (576)
Q Consensus 391 ~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtg 470 (576)
+|+++|||++++|||++++|+++|++||++|+|++.++|+++++.+.|++.++.++|++||+++|++|+||||||+||||
T Consensus 238 ~G~~~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agi~p~dId~i~~hgtg 317 (424)
T PRK06333 238 DGFVMGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLIALRQAGIPPEEVQHLNAHATS 317 (424)
T ss_pred CCeEEecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEeccCCC
Confidence 99999999999999999999999999999999999999999998888899999999999999999999999999999999
Q ss_pred CccCcHHHHHHHHHHHcCCCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCC-cccccCCccc
Q 008146 471 TPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD-TNVLVGPKKE 549 (576)
Q Consensus 471 t~~gD~~E~~Al~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~-~~~~~~~~~~ 549 (576)
|+.+|..|..+|+++|+...++++++.|+++||++||+|++++++++++|++|+|||++|+++|++.++ .+++. ...+
T Consensus 318 t~~~D~~E~~al~~~fg~~~~~~v~s~K~~~GH~~gAaG~~~~~~~~l~l~~g~ipp~~~~~~~~~~~~~~~~~~-~~~~ 396 (424)
T PRK06333 318 TPVGDLGEVAAIKKVFGHVSGLAVSSTKSATGHLLGAAGGVEAIFTILALRDQIAPPTLNLENPDPAAEGLDVVA-NKAR 396 (424)
T ss_pred CccchHHHHHHHHHHhCCCCCceeECcccchhhhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCcccccccc-CCCc
Confidence 999999999999999996667899999999999999999999999999999999999999999999887 55433 4456
Q ss_pred ccCccEEEEeccCCCcceeEEEEeeCC
Q 008146 550 RLEVKAALSNSFGFGGHNSSIIFSPYK 576 (576)
Q Consensus 550 ~~~~~~alv~sfG~gG~na~vil~~~~ 576 (576)
.++.+++++|||||||+|+|+||++|+
T Consensus 397 ~~~~~~al~~s~gfGG~n~~~il~~~~ 423 (424)
T PRK06333 397 PMDMDYALSNGFGFGGVNASILFRRWE 423 (424)
T ss_pred ccCcCEEEEeeecCCCeeEEEEEeccC
Confidence 678899999999999999999999985
|
|
| >COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-76 Score=615.99 Aligned_cols=407 Identities=50% Similarity=0.788 Sum_probs=374.5
Q ss_pred CCcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 008146 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 243 (576)
Q Consensus 164 ~~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa 243 (576)
+++|||||+|+++|.|.+.+++|++|..|+++|..++.|+...++.++.+++++| +.++.+++.++||+.++|++.++
T Consensus 2 ~~rvviTG~g~vs~lG~~~~~~~~~l~~g~sgi~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~d~~~~~a~~Aa 79 (412)
T COG0304 2 MRRVVITGLGIVSSLGNGVEEVWAALLAGKSGIRPITRFDASGLGVKIAGEIKDL--DDQIAKKERRFMDRFSQLAVVAA 79 (412)
T ss_pred CceEEEecceeeecccCCHHHHHHHHhcCCCCCCccccccccCCCCccccccccc--ccccchHHhhcccHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999999988 55678888889999999999999
Q ss_pred HHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHH-Hhhhcc-CCCccccccccchhHHHHHHHhCCCCccc
Q 008146 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKK-MNPFCVPFATTNMGSAMLAMDLGWMGPNY 321 (576)
Q Consensus 244 ~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l-~~~~~~-~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~ 321 (576)
.+||+|||+..+ ...+. |+||++|++.+++.........+ ....++ ++|+.++..+.|+.++.+++.+|++||++
T Consensus 80 ~eAl~dAgl~~~--~~~~~-r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~~g~~G~~~ 156 (412)
T COG0304 80 VEALEDAGLDNE--LNVDM-RVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVFGLKGPNY 156 (412)
T ss_pred HHHHHHcCCCcc--cccCc-cEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHHhCCCCCcC
Confidence 999999999832 12333 99999999999998776533333 344455 89999999999999999999999999999
Q ss_pred cccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceEE
Q 008146 322 SISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGV 401 (576)
Q Consensus 322 tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAaa 401 (576)
++.++|+||..||..|++.|+.|++|+|||||+|..+++..+.+|..++.|++.+++|...|||||+++|||++|||+|+
T Consensus 157 ~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrPfd~~RdGfv~gEGag~ 236 (412)
T COG0304 157 TPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDKNRDGFVIGEGAGA 236 (412)
T ss_pred ChhhhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCCCCCCCCCEEEecceeE
Confidence 99999999999999999999999999999999999999999999999999999899999999999999999999999999
Q ss_pred EEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHH
Q 008146 402 LLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQA 481 (576)
Q Consensus 402 lvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~A 481 (576)
+|||++|+|++||++||++|.|++.++|++|++.|.|++.+..++|+.||+++|++++|||||++|||+|+.||..|..+
T Consensus 237 lVLE~~ehA~aRGA~Iyaei~G~g~~~Da~h~t~P~p~g~Ga~~am~~AL~~Agl~~~~idYinaHgTsT~~nD~~E~~a 316 (412)
T COG0304 237 LVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAGLTPEDIDYINAHGTSTPANDKAESLA 316 (412)
T ss_pred EEecChhhHHhCCCceEEEEEEEEecccccccCCCCCCCchHHHHHHHHHHHcCCCHhHCCEEeCCCccCCCccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCC-CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCC-CCcccccCCcccccCccEEEEe
Q 008146 482 LIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAV-VDTNVLVGPKKERLEVKAALSN 559 (576)
Q Consensus 482 l~~~f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~-~~~~~~~~~~~~~~~~~~alv~ 559 (576)
++++|+.. .+++|.+.|+++||++||+|.++++.++++|++|++||++|+++|+|. ++.+++.. ..+...++++++|
T Consensus 317 i~~vfg~~~~~~~vsstKs~tGH~lGAaGaveai~~~l~l~~g~ippt~n~~~~dp~~~~l~~v~~-~~~~~~~~~~lsn 395 (412)
T COG0304 317 IKRVFGEHAKSLPVSSTKSLTGHTLGAAGAVEAIISLLALRDGIIPPTINLDNPDPEAADLDVVPN-EARTGAVRAALSN 395 (412)
T ss_pred HHHHhcccccCceeeecccccccChhhHHHHHHHHHHHHHhcCCcCCCCCcCCCCcccccccccCC-cccccceeEEEec
Confidence 99999975 358899999999999999999999999999999999999999999986 44555433 2333348999999
Q ss_pred ccCCCcceeEEEEeeCC
Q 008146 560 SFGFGGHNSSIIFSPYK 576 (576)
Q Consensus 560 sfG~gG~na~vil~~~~ 576 (576)
||||||+|+.+|+++|+
T Consensus 396 sfGFGG~Na~lv~~~~~ 412 (412)
T COG0304 396 SFGFGGTNASLVFKRYQ 412 (412)
T ss_pred ccccCCcceEEEEecCC
Confidence 99999999999999985
|
|
| >PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-75 Score=620.64 Aligned_cols=403 Identities=34% Similarity=0.576 Sum_probs=365.6
Q ss_pred CCcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCC--CCCCcccccccc-CCCCCCCCChhhhhcCCHHHHHHH
Q 008146 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDC--TSFPTKIAAEIK-SFSTDGWVAPKLSKRMDKFMLYLL 240 (576)
Q Consensus 164 ~~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~--~~~~~~~~g~v~-~fd~~~~i~~~~a~~mdp~~rl~l 240 (576)
+++|||||||+++|.|.++++||++|.+|+++|++++.|.. ..++.++++++. +|| .++++++.++|||++++++
T Consensus 11 ~~~VvItGig~~sp~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~g~i~~~~d--~~~~~~~~~~~d~~~~~~l 88 (418)
T PRK07910 11 FPNVVVTGIAMTTALATDAETTWKLLLDGQSGIRTLDDPFVEEFDLPVRIGGHLLEEFD--HQLTRVELRRMSYLQRMST 88 (418)
T ss_pred CCCEEEEeeEEECCCCCCHHHHHHHHHcCCCeeEeCChhhhhccCCCcceEEEeccCcc--ccCCHHHHhhccHHHHHHH
Confidence 47899999999999999999999999999999999876532 346677777774 444 3488999999999999999
Q ss_pred HHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHH-hhhccCCCccccccccchhHHHHHHHhCCCCc
Q 008146 241 TAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALR-ISYKKMNPFCVPFATTNMGSAMLAMDLGWMGP 319 (576)
Q Consensus 241 ~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp 319 (576)
.++++||+|||++ ..++.|+||++|++.++.....+.+..+. .+.+..+++.++..+.|..+.++++.+|++||
T Consensus 89 ~aa~~AledAg~~-----~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~G~ 163 (418)
T PRK07910 89 VLGRRVWENAGSP-----EVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAKAG 163 (418)
T ss_pred HHHHHHHHHcCCC-----CCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCCCCC
Confidence 9999999999985 35678999999999998887776666553 34456677778888899999999999999999
Q ss_pred cccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhh-hhccCCCCCCCCCCCccCCCcceecCc
Q 008146 320 NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRA-LSQRNNDPTKASRPWDINRDGFVMGEG 398 (576)
Q Consensus 320 ~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~-ls~~~~~p~~~~rpfd~~~~G~v~gEG 398 (576)
+++|+++|+|++.||++|+++|++|+||++||||+|..++|..+..|.++++ ++..+.+|++.|||||.+++|+++|||
T Consensus 164 ~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd~~~~G~v~gEG 243 (418)
T PRK07910 164 VITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDRDGFVFGEG 243 (418)
T ss_pred cccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCcCCCCCEeeece
Confidence 9999999999999999999999999999999999999999999999999999 887677789999999999999999999
Q ss_pred eEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHH
Q 008146 399 AGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKE 478 (576)
Q Consensus 399 AaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E 478 (576)
++++|||++++|+++|++||++|+|+++++|+++...+.|.+.++.++|++||+++|++++||||||+|||||+.+|..|
T Consensus 244 aa~vvLe~~~~A~~rg~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E 323 (418)
T PRK07910 244 GALMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVAE 323 (418)
T ss_pred EEEEEEeeHHHHHhCCCcEEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEE
Q 008146 479 YQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALS 558 (576)
Q Consensus 479 ~~Al~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv 558 (576)
.++|+++|+.. ..+++++|+++||++||+|++++++++++|++++|||++|+++|++.+++++... ++...+++++++
T Consensus 324 ~~Al~~~fg~~-~~~v~s~K~~~GH~~~AaG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~l~~~~~-~~~~~~~~~al~ 401 (418)
T PRK07910 324 GKAINNALGGH-RPAVYAPKSALGHSVGAVGAVESILTVLALRDGVIPPTLNLENLDPEIDLDVVAG-EPRPGNYRYAIN 401 (418)
T ss_pred HHHHHHHhCCC-CCceeCccccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCCC-CCcCCCccEEEE
Confidence 99999999964 3579999999999999999999999999999999999999999999998876543 333446899999
Q ss_pred eccCCCcceeEEEEeeC
Q 008146 559 NSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 559 ~sfG~gG~na~vil~~~ 575 (576)
|||||||+|+++||++|
T Consensus 402 nsfGfGG~N~slvl~~~ 418 (418)
T PRK07910 402 NSFGFGGHNVALAFGRY 418 (418)
T ss_pred eeecCCCeeEEEEEecC
Confidence 99999999999999986
|
|
| >cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-75 Score=619.11 Aligned_cols=398 Identities=28% Similarity=0.467 Sum_probs=366.0
Q ss_pred CcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 008146 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 244 (576)
Q Consensus 165 ~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa~ 244 (576)
++|||||||+++|.|.++++||++|.+|+++|+++++|+...++....+++++|+.+.++++++.++||++++|++.+++
T Consensus 1 ~~VvItG~G~vsp~G~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~d~~~~~~l~aa~ 80 (399)
T cd00832 1 RRAVVTGIGVVAPNGLGVEEYWKAVLDGRSGLGPITRFDPSGYPARLAGEVPDFDAAEHLPGRLLPQTDRMTRLALAAAD 80 (399)
T ss_pred CCEEEEeeEEeCCCCCCHHHHHHHHHhCCCeEeeCCccccccCCCceeEEeCCcChhhcCCHHHHhhCCHHHHHHHHHHH
Confidence 47999999999999999999999999999999999999988888888899999998888999999999999999999999
Q ss_pred HHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHH-hhhccCCCccccccccchhHHHHHHHhCCCCccccc
Q 008146 245 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALR-ISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 323 (576)
Q Consensus 245 eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv 323 (576)
+||+|||++++ ++++.|+||++|++.+++......+..+. ......+++.++..+.+..++++++.||++||+++|
T Consensus 81 eAl~dAGl~~~---~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~~ti 157 (399)
T cd00832 81 WALADAGVDPA---ALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGMRGPSGVV 157 (399)
T ss_pred HHHHHcCCCcc---ccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCCCCCcccc
Confidence 99999999876 56788999999999998877666665553 344566777777778888999999999999999999
Q ss_pred cCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceEEEE
Q 008146 324 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 403 (576)
Q Consensus 324 ~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAaalv 403 (576)
+++|+||+.||++|+++|++|+ |++||||+|..++|..+..|..++.++. ..+|...|||||.+++||++|||++++|
T Consensus 158 ~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~-~~~p~~~~rPFd~~~~G~~~gEGa~~lv 235 (399)
T cd00832 158 VAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLST-SDDPARAYLPFDAAAAGYVPGEGGAILV 235 (399)
T ss_pred cchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCC-CCCCCCCcCCCcCCCCCEeeeceEEEEE
Confidence 9999999999999999999999 9999999999999999999999999985 4457889999999999999999999999
Q ss_pred EcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHH
Q 008146 404 LEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALI 483 (576)
Q Consensus 404 L~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~ 483 (576)
||++++|++||++||++|.|++.++|+++.. +.+.++.++|+++|+++|++++|||||++|||||+.+|..|.++|+
T Consensus 236 Le~~~~A~~rg~~i~a~i~g~~~~~d~~~~~---~~~~~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~D~~E~~al~ 312 (399)
T cd00832 236 LEDAAAARERGARVYGEIAGYAATFDPPPGS---GRPPGLARAIRLALADAGLTPEDVDVVFADAAGVPELDRAEAAALA 312 (399)
T ss_pred EeeHHHHHHCCCeEEEEEEeEEEcCCCCCCC---CCHHHHHHHHHHHHHHcCCCHHHccEEEeccCcCCCCCHHHHHHHH
Confidence 9999999999999999999999999998764 2588999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCC
Q 008146 484 HCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGF 563 (576)
Q Consensus 484 ~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~ 563 (576)
++|+.. .++|++.|+++||+++|+|++++++++++|++++|||++|+++|++.++.++... +.++..++++++|||||
T Consensus 313 ~~fg~~-~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l~~~~ipp~~n~~~~~p~~~l~~v~~-~~~~~~~~~al~nsfgf 390 (399)
T cd00832 313 AVFGPR-GVPVTAPKTMTGRLYAGGAPLDVATALLALRDGVIPPTVNVTDVPPAYGLDLVTG-RPRPAALRTALVLARGR 390 (399)
T ss_pred HHhCCC-CCceeCCCchhcchHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCcccCCC-cccCCCCCEEEEeccCC
Confidence 999875 5889999999999999999999999999999999999999999999888876543 34455789999999999
Q ss_pred CcceeEEEE
Q 008146 564 GGHNSSIIF 572 (576)
Q Consensus 564 gG~na~vil 572 (576)
||+|+|+||
T Consensus 391 GG~na~lvl 399 (399)
T cd00832 391 GGFNSALVV 399 (399)
T ss_pred CCcceEEEC
Confidence 999999986
|
CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. |
| >COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-76 Score=686.51 Aligned_cols=396 Identities=29% Similarity=0.481 Sum_probs=358.8
Q ss_pred cEEEEecceecCCCCCHHHHHHHHHcCCCcceec--cCCCCCCCC-----------cccccc---ccCCCCCCC-CChhh
Q 008146 166 RVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEI--ETFDCTSFP-----------TKIAAE---IKSFSTDGW-VAPKL 228 (576)
Q Consensus 166 ~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~--~~~~~~~~~-----------~~~~g~---v~~fd~~~~-i~~~~ 228 (576)
+|+|+||+|+||+.+++++||++|.+|+++|+++ ++||+..++ .+.+++ ++.||+.+| |+|+|
T Consensus 5 ~IAIiGm~~rfPga~~~~~~W~~l~~g~~~i~~ip~~rwd~~~~~~~~~~~~gk~~~~~ggfl~~~~~FD~~fFgisPrE 84 (1061)
T COG3321 5 PIAIIGMACRFPGADSPEEFWDLLKEGRDEITEVPADRWDVDAYYDPDPTVPGKSYSRWGGFLDDVDDFDALFFGISPRE 84 (1061)
T ss_pred cEEEEeccccCCCCCCHHHHHHHHhcCCceeeecChhhhhHhhccCCccccccccccccccccCCccccCHHHcCCCHHH
Confidence 3999999999999999999999999999999999 467766552 234444 456999999 99999
Q ss_pred hhcCCHHHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHH
Q 008146 229 SKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSA 308 (576)
Q Consensus 229 a~~mdp~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~ 308 (576)
+..|||||||+|+++|+|||||||+++ .+.+++||||+|.+..+|....... .....++...++..++.++
T Consensus 85 A~~mDPQqRllLe~aw~AlEdAG~~~~---~l~g~~tgV~~g~~~~~y~~~~~~~------~~~~~~~~~~g~~~~~~a~ 155 (1061)
T COG3321 85 AEAMDPQQRLLLEVAWEALEDAGIYPD---SLRGSATGVFAGASVADYLLLLLAD------DEAEPEYAITGNSSSVAAG 155 (1061)
T ss_pred HHhcCchHhHHHHHHHHHHHHcCCCcc---ccCCcceEEEEeeccCccccccccc------cccccceecccchhhHHHH
Confidence 999999999999999999999999997 7778999999999887665332100 1134556666777889999
Q ss_pred HHHHHhCCCCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCcc
Q 008146 309 MLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDI 388 (576)
Q Consensus 309 ~ia~~lgl~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~ 388 (576)
|+|+.|||+||+++|+++|||+|+|+|+||++|++|+||++|+|||+...+|.....|++.++|+ |++.|++||.
T Consensus 156 Risy~l~l~GPs~~vdtaCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls-----~~g~c~~fd~ 230 (1061)
T COG3321 156 RISYVLGLSGPSVTVDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLS-----PDGRCKAFDA 230 (1061)
T ss_pred HHHHHhcCCCCCccccchhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcC-----CCCcceeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999 8999999999
Q ss_pred CCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecC
Q 008146 389 NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHA 468 (576)
Q Consensus 389 ~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hg 468 (576)
++|||+.|||+|++|||++++|+++|++||++|+|+++|+||.....+.|+..+|..++++||+++|++|++|+|||+||
T Consensus 231 ~adG~v~geG~g~vvLKrl~~A~~dgd~IyavI~gsavn~dG~~~gltaP~~~aQ~~v~~~al~~a~i~p~tv~yvEaHg 310 (1061)
T COG3321 231 DADGYVRGEGAGVVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPNLEAQADVIREALADAGIDPATVQYVEAHG 310 (1061)
T ss_pred CCCCEEEeeeEEEEEEEEhHHHHhCCCeEEEEEEeeeeccCCCcCCCCCCCHHHHHHHHHHHHHhcCCCcccCcEEEecC
Confidence 99999999999999999999999999999999999999999987788999999999999999999999999999999999
Q ss_pred CCCccCcHHHHHHHHHHHcCC---CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcc---c
Q 008146 469 TSTPAGDIKEYQALIHCFGQN---RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTN---V 542 (576)
Q Consensus 469 tgt~~gD~~E~~Al~~~f~~~---~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~---~ 542 (576)
|||++||++|+++|.++|+.. .+|.++|+|+||||++.|+|+++++|++++|+|++|||++|++.|+|.+++. +
T Consensus 311 TGT~lGDpiE~~aL~~v~~~~~~~~~c~iGSvKsNiGH~~~AaGiagliK~~Lal~~~~ip~~l~~~~~np~i~~~~sp~ 390 (1061)
T COG3321 311 TGTPLGDPIEANALGAVYGEGAPAQPCAIGSVKSNIGHLEAAAGIAGLIKTALALKHGYIPPTLHFDTPNPEIDFDSSPF 390 (1061)
T ss_pred CCCCCcCHHHHHHHHHHhccCCCCCcccccccccccccHHHHHHHHHHHHHHHhhhcCccCCcCCCCCCCcCCccccCCe
Confidence 999999999999999999854 4688999999999999999999999999999999999999999999999863 4
Q ss_pred ccCCccccc----CccEEEEeccCCCcceeEEEEeeC
Q 008146 543 LVGPKKERL----EVKAALSNSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 543 ~~~~~~~~~----~~~~alv~sfG~gG~na~vil~~~ 575 (576)
++....++| .+|++.+|||||||+|+|+|||+|
T Consensus 391 ~v~~~~~~W~~~~~prrAgvssfG~gGtNaHvIlEe~ 427 (1061)
T COG3321 391 VVPTEATPWPTGGGPRRAGVSSFGFGGTNAHVILEEA 427 (1061)
T ss_pred EeecCCcCCCCCCCCceeeeeccCCCCCceEEEEeec
Confidence 444444444 579999999999999999999987
|
|
| >PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-75 Score=622.10 Aligned_cols=409 Identities=51% Similarity=0.824 Sum_probs=379.0
Q ss_pred CCcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 008146 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 243 (576)
Q Consensus 164 ~~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa 243 (576)
|++|+|||||+++|.|.++++||++|++|+++++++++|+...++..+.+++++||++.|+++++.++|||+++|+++++
T Consensus 1 m~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~g~i~~f~~~~~~~~~~~~~~~~~~~l~~~aa 80 (411)
T PRK07314 1 KRRVVVTGLGAVSPLGNDVESTWKNLLAGKSGIGPITHFDTSDLAVKIAGEVKDFNPDDYMSRKEARRMDRFIQYGIAAA 80 (411)
T ss_pred CCcEEEEcceEECCCcCCHHHHHHHHHhCCCcEEECCcccccCCCccEEEEeCCcChhhcCCHHHhhcCCHHHHHHHHHH
Confidence 36899999999999999999999999999999999999998888888999999999999999999999999999999999
Q ss_pred HHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHh-hhccCCCccccccccchhHHHHHHHhCCCCcccc
Q 008146 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRI-SYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYS 322 (576)
Q Consensus 244 ~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~t 322 (576)
++||+|||++++ +++..++|||+|++.+++....+++..+.. ....+.|+.++....+..++++++.||++||+++
T Consensus 81 ~~Al~dAGl~~~---~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~~t 157 (411)
T PRK07314 81 KQAVEDAGLEIT---EENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGAKGPNHS 157 (411)
T ss_pred HHHHHHcCCCcc---cCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhCCCCcccc
Confidence 999999999986 677889999999999988877777766533 3455677777888889999999999999999999
Q ss_pred ccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceEEE
Q 008146 323 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 402 (576)
Q Consensus 323 v~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAaal 402 (576)
|+++|+|++.||+.|+++|++|++|++||||+|.+++|..+.+|..++.++....+|+..|+|||.++||+++|||++++
T Consensus 158 v~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~dG~~~geGAaav 237 (411)
T PRK07314 158 IVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDRDGFVMGEGAGIL 237 (411)
T ss_pred chhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCCCCCEeEEceEEEE
Confidence 99999999999999999999999999999999999999999999999999876677888999999999999999999999
Q ss_pred EEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHH
Q 008146 403 LLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQAL 482 (576)
Q Consensus 403 vL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al 482 (576)
||+++++|+++|++||++|+|++.++|+.+.+.+.+.+.++.++++++|+++|++++||||||+|||||+++|..|.++|
T Consensus 238 vL~~~~~A~~~g~~~~a~I~g~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~agi~~~dId~v~~hgtgt~~~d~~E~~al 317 (411)
T PRK07314 238 VLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKDAGINPEDIDYINAHGTSTPAGDKAETQAI 317 (411)
T ss_pred EEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEEccccCCccccHHHHHHH
Confidence 99999999999999999999999999999988888888889999999999999999999999999999999999999999
Q ss_pred HHHHcCC-CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEecc
Q 008146 483 IHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSF 561 (576)
Q Consensus 483 ~~~f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sf 561 (576)
.++|+.. .++++++.|+++||+++|+|++++++++++|++++|||++|+++|++.++.++... +....+++++++|||
T Consensus 318 ~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~s~ 396 (411)
T PRK07314 318 KRVFGEHAYKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIRDQVIPPTINLDNPDEECDLDYVPN-EARERKIDYALSNSF 396 (411)
T ss_pred HHHhcccCCCCeeECccchhchhHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCccccCC-cccCCCCCEEEEecc
Confidence 9999864 46899999999999999999999999999999999999999999999887766443 344457899999999
Q ss_pred CCCcceeEEEEeeCC
Q 008146 562 GFGGHNSSIIFSPYK 576 (576)
Q Consensus 562 G~gG~na~vil~~~~ 576 (576)
||||+|+|+||++|+
T Consensus 397 gfGG~n~~~vl~~~~ 411 (411)
T PRK07314 397 GFGGTNASLVFKRYE 411 (411)
T ss_pred cCCCceEEEEEecCC
Confidence 999999999999985
|
|
| >PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-74 Score=613.59 Aligned_cols=403 Identities=44% Similarity=0.714 Sum_probs=372.7
Q ss_pred CcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 008146 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 244 (576)
Q Consensus 165 ~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa~ 244 (576)
++|||||||+++|.|.++++||++|++|+++|+++++|+...++....+++++||+..++++++.++||++++|++.+++
T Consensus 2 ~~v~ItG~g~vsp~G~~~~~~~~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~f~~~~~~~~~~~~~~~~~~~l~~~Aa~ 81 (406)
T PRK08439 2 KRVVVTGIGMINSLGLNKESSFKAICNGECGIKKITLFDASDFPVQIAGEITDFDPTEVMDPKEVKKADRFIQLGLKAAR 81 (406)
T ss_pred CCEEEEeeEEECCCcCCHHHHHHHHHcCCCceEeCCCccccCCCCceeEEcCCcChhhcCCHHHHhhcCHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999988888888999999999888999999999999999999999
Q ss_pred HHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHH-HhhhccCCCccccccccchhHHHHHHHhCCCCccccc
Q 008146 245 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 323 (576)
Q Consensus 245 eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv 323 (576)
+||+|||++++ +++..++||++|+..+++....++...+ ....+.++|+.++..+.|..++++++.||++||++++
T Consensus 82 ~AL~dAGl~~~---~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~~~~ 158 (406)
T PRK08439 82 EAMKDAGFLPE---ELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGLKGPNLSS 158 (406)
T ss_pred HHHHHcCCCcc---cCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCCCCCcccc
Confidence 99999999876 5677899999999988887666554433 3445677888889999999999999999999999999
Q ss_pred cCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceEEEE
Q 008146 324 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 403 (576)
Q Consensus 324 ~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAaalv 403 (576)
+++|+|++.||+.|+++|++|++|++||||+|..++|..+.+|..++.|+..+.+|+..|||||.+++|+++|||++++|
T Consensus 159 ~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGa~~lv 238 (406)
T PRK08439 159 VTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKDRDGFVMGEGAGALV 238 (406)
T ss_pred ccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccCCCCcEEeeCceEEEE
Confidence 99999999999999999999999999999999999999999999999999877789999999999999999999999999
Q ss_pred EcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHH
Q 008146 404 LEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALI 483 (576)
Q Consensus 404 L~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~ 483 (576)
||++++|++||++||++|.|++.++|+++++.|.| .++.++|+++|+++|+ +||||||+|||||+.+|..|.++|.
T Consensus 239 Le~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~p~~--~~~~~a~~~al~~ag~--~~i~~v~~hgtgt~~~D~~E~~al~ 314 (406)
T PRK08439 239 LEEYESAKKRGAKIYAEIIGFGESGDANHITSPAP--EGPLRAMKAALEMAGN--PKIDYINAHGTSTPYNDKNETAALK 314 (406)
T ss_pred EccHHHHHHCCCeEEEEEEeEEccCCCCCCCCCCH--HHHHHHHHHHHHHcCC--CccCEEEccCCcCCCCCHHHHHHHH
Confidence 99999999999999999999999999988877665 7889999999999999 7999999999999999999999999
Q ss_pred HHHcCC-CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccC
Q 008146 484 HCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFG 562 (576)
Q Consensus 484 ~~f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG 562 (576)
++|+.. ..++++++|+++||+++|+|++++++++++|++|+|||++|+++|++.++++++.. ..++.+++.+++||||
T Consensus 315 ~~f~~~~~~~~v~s~K~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~nsfg 393 (406)
T PRK08439 315 ELFGSKEKVPPVSSTKGQIGHCLGAAGAIEAVISIMAMRDGILPPTINQETPDPECDLDYIPN-VARKAELNVVMSNSFG 393 (406)
T ss_pred HHhcccCCCCeEECcccccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCCcccCCC-ccccCCCCEEEEeeec
Confidence 999875 34689999999999999999999999999999999999999999999988876543 3455678999999999
Q ss_pred CCcceeEEEEeeC
Q 008146 563 FGGHNSSIIFSPY 575 (576)
Q Consensus 563 ~gG~na~vil~~~ 575 (576)
|||+|+|+||++|
T Consensus 394 fGG~n~~lvl~~~ 406 (406)
T PRK08439 394 FGGTNGVVIFKKV 406 (406)
T ss_pred CCCceEEEEEecC
Confidence 9999999999987
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-74 Score=710.59 Aligned_cols=404 Identities=26% Similarity=0.434 Sum_probs=357.4
Q ss_pred CCCcEEEEecceecCCCCCHHHHHHHHHcCCCcceecc--CCCCCCC-----------Ccccccccc--CCCCCCC-CCh
Q 008146 163 KQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIE--TFDCTSF-----------PTKIAAEIK--SFSTDGW-VAP 226 (576)
Q Consensus 163 ~~~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~--~~~~~~~-----------~~~~~g~v~--~fd~~~~-i~~ 226 (576)
++++|+||||||++|++.++++||++|.+|+++|++++ +|+...| +.+.+++++ +||+.+| |+|
T Consensus 5 ~~~~IAIvGmg~~~P~a~~~~~fW~~L~~G~~~i~~ip~~rw~~~~~~~~~~~~~~~~~~~~ggfl~~v~FD~~~F~i~p 84 (2582)
T TIGR02813 5 KDMPIAIVGMASIFANSRYLNKFWDLIFEKIDAITDVPSDHWAKDDYYDSDKSEADKSYCKRGGFLPEVDFNPMEFGLPP 84 (2582)
T ss_pred CCCCEEEEeeeeeCCCCCCHHHHHHHHHcCCCccCCCChhhCChhhccCccccccCCcccceeEecCccCCCHhhcCCCH
Confidence 45779999999999999999999999999999999884 6765443 345667776 5888888 999
Q ss_pred hhhhcCCHHHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHH-----------HH----------HHHH
Q 008146 227 KLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVF-----------YD----------AIEA 285 (576)
Q Consensus 227 ~~a~~mdp~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~-----------~~----------~~~~ 285 (576)
++++.|||+|+|+++++++||+||||.. .++++|||||+|++.+++... .+ ..+.
T Consensus 85 ~ea~~mDpqqrl~L~~a~eALedAG~~~----~~~~~r~GV~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (2582)
T TIGR02813 85 NILELTDISQLLSLVVAKEVLNDAGLPD----GYDRDKIGITLGVGGGQKQSSSLNARLQYPVLKKVFKASGVEDEDSEM 160 (2582)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHhCCCCC----CCCCCCEEEEEEECCCcccchhhhhhhcchhhhhhhhccccchhhHHH
Confidence 9999999999999999999999999975 467899999999876643210 00 0011
Q ss_pred H----HhhhccCCCccccccccchhHHHHHHHhCCCCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchh
Q 008146 286 L----RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI 361 (576)
Q Consensus 286 l----~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~ 361 (576)
+ ...+...++..+++...|+++++|++.|||+||+++|+++|+||+.||++|+++|++|+||+|||||++..++|.
T Consensus 161 ~~~~~~~~~~~~~~~~~~g~~~n~~A~RIS~~f~L~Gps~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~ 240 (2582)
T TIGR02813 161 LIKKFQDQYIHWEENSFPGSLGNVISGRIANRFDLGGMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPF 240 (2582)
T ss_pred hhhhhcccccccCccccccccccHHHHHHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHH
Confidence 1 112234556678889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChH
Q 008146 362 GLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGV 441 (576)
Q Consensus 362 ~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~ 441 (576)
.+..|.+.++|+ +++.|||||.++|||++|||+|+||||++++|+++|++||++|+|++.++||+....+.|+..
T Consensus 241 ~~~~fs~~~~lS-----~~g~crpFD~~adG~v~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~~DG~~~~itaP~~~ 315 (2582)
T TIGR02813 241 MYMSFSKTPAFT-----TNEDIQPFDIDSKGMMIGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKFKSIYAPRPE 315 (2582)
T ss_pred HHHHHHhccCcC-----CCCCccCCCCCCCcccccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEcCCCCCCCCcCCCHH
Confidence 999999999998 678899999999999999999999999999999999999999999999999996666788888
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCC----CCcccccccccccccccchhHHHHHHHH
Q 008146 442 GVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN----RGLRVNSTKSMIGHLLGAAGAVEAIAVV 517 (576)
Q Consensus 442 ~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~----~~~~v~s~K~~iGH~~gAsG~~~li~~~ 517 (576)
+|.++|++||++||++|+||+|||+|||||+.||++|.++|.++|+.. .+++|+|+|++|||+++|||++++||++
T Consensus 316 gq~~~i~~Al~~Agi~p~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~vgSvKs~iGH~~~AAG~a~lik~~ 395 (2582)
T TIGR02813 316 GQAKALKRAYDDAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGMIKAV 395 (2582)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCceeeccccccccchHhHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999863 3589999999999999999999999999
Q ss_pred HHHHcCCCCCCCCCCCCCCCCCcc---cccCCccccc------CccEEEEeccCCCcceeEEEEeeC
Q 008146 518 QAIRTGWIHPNINLENPDAVVDTN---VLVGPKKERL------EVKAALSNSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 518 l~L~~g~ipp~~~~~~p~~~~~~~---~~~~~~~~~~------~~~~alv~sfG~gG~na~vil~~~ 575 (576)
++|++|+|||++|+++|++.++++ +++....++| .+|++++|||||||+|+|+||++|
T Consensus 396 lal~~~~iPp~~~~~~pnp~~~~~~~~~~v~~~~~pw~~~~~~~~r~a~vnsfGfGGtN~hvvlee~ 462 (2582)
T TIGR02813 396 LALHHKVLPPTINVDQPNPKLDIENSPFYLNTETRPWMQREDGTPRRAGISSFGFGGTNFHMVLEEY 462 (2582)
T ss_pred HHHhcCCcCCCCCCCCCCCCCCccccceeecCCcccCcccCCCCccEEEEeCccCCCeeEEEEEeec
Confidence 999999999999999999998764 3343434444 368999999999999999999998
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-73 Score=606.54 Aligned_cols=400 Identities=39% Similarity=0.634 Sum_probs=358.1
Q ss_pred CcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 008146 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 244 (576)
Q Consensus 165 ~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa~ 244 (576)
++|||||||+++|.|.++++||++|++|+++|+++++|+...++.++.+++ +|++..+++++..++|++..++++.++.
T Consensus 2 ~rVvITG~G~vsp~G~~~~~~w~~l~~G~sgi~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~r~~~~a~~aa~ 80 (406)
T PRK07967 2 RRVVITGLGIVSSIGNNQQEVLASLREGRSGITFSPEFAEMGMRSQVWGNV-KLDPTGLIDRKVMRFMGDASAYAYLAME 80 (406)
T ss_pred CcEEEEcceEECCCCCCHHHHHHHHHcCCCceeECCcccccCCCCceEEEc-CCChhhcCCHHHhhcCCHHHHHHHHHHH
Confidence 689999999999999999999999999999999999999888888888887 4887777888888999999999999999
Q ss_pred HHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHH--hhhccCCCccccccccchhHHHHHHHhCCCCcccc
Q 008146 245 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALR--ISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYS 322 (576)
Q Consensus 245 eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~t 322 (576)
+||+|||+.++ ++...|+||++|++.+.+....+.+..+. .+.+.++|+.++..+.|..++++++.||++||+++
T Consensus 81 ~Al~dAGl~~~---~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~l~Gp~~t 157 (406)
T PRK07967 81 QAIADAGLSEE---QVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKIKGVNYS 157 (406)
T ss_pred HHHHHcCCCCc---cCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHCCCCCccc
Confidence 99999999865 56778999999998887765555444443 34456788888999999999999999999999999
Q ss_pred ccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhcc-CCCCCCCCCCCccCCCcceecCceEE
Q 008146 323 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR-NNDPTKASRPWDINRDGFVMGEGAGV 401 (576)
Q Consensus 323 v~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~-~~~p~~~~rpfd~~~~G~v~gEGAaa 401 (576)
|+++|+||+.||..|+++|++|++|++||||+|. +.+.....|..++.|+.. +.+|+..|||||.+++||++|||+++
T Consensus 158 vs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~-~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~G~v~gEGaa~ 236 (406)
T PRK07967 158 ISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEE-LDWEMSCLFDAMGALSTKYNDTPEKASRAYDANRDGFVIAGGGGV 236 (406)
T ss_pred cccHhHHHHHHHHHHHHHHHcCCCCEEEEeeecc-cChHHHHHHHHhhhhccCCCCCCCcCCcCCcCCCCceeeeceEEE
Confidence 9999999999999999999999999999999997 455566779999999854 56688999999999999999999999
Q ss_pred EEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHH
Q 008146 402 LLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQA 481 (576)
Q Consensus 402 lvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~A 481 (576)
+|||++++|++||++||++|+|++.++|++|++. |++.++.++|++||+.++ + ||||||+|||||+.+|..|.++
T Consensus 237 lvLe~~~~A~~rga~i~a~i~G~g~~~d~~~~~~--p~~~~~~~a~~~Al~~~~--~-~Idyi~aHgtGT~~~D~~E~~A 311 (406)
T PRK07967 237 VVVEELEHALARGAKIYAEIVGYGATSDGYDMVA--PSGEGAVRCMQMALATVD--T-PIDYINTHGTSTPVGDVKELGA 311 (406)
T ss_pred EEEeeHHHHHhCCCcEEEEEEEEEECCCCCCCCC--CCHHHHHHHHHHHHhCCC--C-CccEEEcCCCCCCCCCHHHHHH
Confidence 9999999999999999999999999999998764 579999999999998654 5 9999999999999999999999
Q ss_pred HHHHHcCCCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCC-CcccccCCcccccCccEEEEec
Q 008146 482 LIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVV-DTNVLVGPKKERLEVKAALSNS 560 (576)
Q Consensus 482 l~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~-~~~~~~~~~~~~~~~~~alv~s 560 (576)
|+++|+.. .++|+++|+++||+++|+|++++++++++|++++|||++|++++++.+ +.+++.. ..+..+++.+++||
T Consensus 312 i~~~fg~~-~~~v~s~K~~~GH~~~AaG~~e~i~~~lal~~~~iPpt~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~s 389 (406)
T PRK07967 312 IREVFGDK-SPAISATKSLTGHSLGAAGVQEAIYSLLMMEHGFIAPSANIEELDPQAAGMPIVTE-TTDNAELTTVMSNS 389 (406)
T ss_pred HHHHhCCC-CCeeECcccccccCccccchHHHHHHHHHHhcCcCCCCCCCCCCCccccCCCccCC-CCcCCCCCEEEEec
Confidence 99999864 468999999999999999999999999999999999999999999877 4555432 23334689999999
Q ss_pred cCCCcceeEEEEeeCC
Q 008146 561 FGFGGHNSSIIFSPYK 576 (576)
Q Consensus 561 fG~gG~na~vil~~~~ 576 (576)
|||||+|+|+||++|+
T Consensus 390 fgfGG~n~~lvl~~~~ 405 (406)
T PRK07967 390 FGFGGTNATLVFRRYK 405 (406)
T ss_pred ccCCCeeEEEEEEecC
Confidence 9999999999999985
|
|
| >PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-73 Score=607.51 Aligned_cols=401 Identities=35% Similarity=0.526 Sum_probs=362.1
Q ss_pred CcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCC-CCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 008146 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDC-TSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 243 (576)
Q Consensus 165 ~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~-~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa 243 (576)
++|||||||+++|.|.++++||++|.+|+++|+++++|+. ..++...++++++|+.+.++++++.++||+.++|++.++
T Consensus 2 ~~VvITG~g~vtp~G~~~~~~~~~L~~g~s~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~r~~~~~~~~al~aa 81 (405)
T PRK09116 2 RRVVVTGMGGVTALGEDWQTIAARLKAGRNAVRRMPEWDRYDGLNTRLAAPIDDFELPAHYTRKKIRSMGRVSLMATRAS 81 (405)
T ss_pred CCEEEEeeEEECCCCCCHHHHHHHHHcCCCCEEeCCchhhccCCCCceEEEecCcChhHhcCHHHHhhCCHHHHHHHHHH
Confidence 6899999999999999999999999999999999998875 567888999999998888888999999999999999999
Q ss_pred HHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHh-hhccCCCccccccccchhHHHHHHHhCCCCcccc
Q 008146 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRI-SYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYS 322 (576)
Q Consensus 244 ~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~t 322 (576)
++||+|||+.... ..++.|+||++|++.++.....++...+.. ....+++..++..+.|..++++++.||++||+++
T Consensus 82 ~~Al~dAGl~~~~--~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~Gp~~t 159 (405)
T PRK09116 82 ELALEDAGLLGDP--ILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFGLKGRVIP 159 (405)
T ss_pred HHHHHHcCCCCcc--ccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhCCCCCccc
Confidence 9999999995321 346689999999999888777666665533 3345677777777888999999999999999999
Q ss_pred ccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceEEE
Q 008146 323 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 402 (576)
Q Consensus 323 v~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAaal 402 (576)
|+++|+|++.||+.|+++|++|++|++||||+|. +++.....|..++.++..+..|...|||||.+++|+++|||++++
T Consensus 160 i~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~-~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~~~G~v~gEGa~~~ 238 (405)
T PRK09116 160 TSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEE-LCPTEAAVFDTLFATSTRNDAPELTPRPFDANRDGLVIGEGAGTL 238 (405)
T ss_pred ccchhhhHHHHHHHHHHHHHcCCCCEEEEecchh-cChHHHHHHHHhhhhccCCCCCCCCCCCCcCCCCCEeeeccEEEE
Confidence 9999999999999999999999999999999998 677777888888888766667888999999999999999999999
Q ss_pred EEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHH
Q 008146 403 LLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQAL 482 (576)
Q Consensus 403 vL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al 482 (576)
|||++++|+++|++||++|+|++.++|+++.+. |+..++.++|+++|+++|++|+||+||++|||||+.+|..|.++|
T Consensus 239 vLe~~~~A~~rga~i~a~i~g~~~~~d~~~~~~--p~~~~~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~D~~E~~Ai 316 (405)
T PRK09116 239 VLEELEHAKARGATIYAEIVGFGTNSDGAHVTQ--PQAETMQIAMELALKDAGLAPEDIGYVNAHGTATDRGDIAESQAT 316 (405)
T ss_pred EEccHHHHHhCCCceEEEEEEEEEcCCCCcCCC--CCHHHHHHHHHHHHHHhCCCHHHcCEEECcCccCCCCCHHHHHHH
Confidence 999999999999999999999999999988764 467788999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCC-CcccccCCcccccCccEEEEecc
Q 008146 483 IHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVV-DTNVLVGPKKERLEVKAALSNSF 561 (576)
Q Consensus 483 ~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~-~~~~~~~~~~~~~~~~~alv~sf 561 (576)
+++|+. .++|++.|+++||+++|+|++++++++++|++++|||++|+++|++.+ +.+++. .+.++++.+.+++|||
T Consensus 317 ~~~fg~--~~pv~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ippt~~~~~~~~~~~~l~~v~-~~~~~~~~~~~l~nsf 393 (405)
T PRK09116 317 AAVFGA--RMPISSLKSYFGHTLGACGALEAWMSIEMMNEGWFAPTLNLTQVDPACGALDYIM-GEAREIDTEYVMSNNF 393 (405)
T ss_pred HHHhCC--CCeeECcchhhcccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCcccCccC-CCCccCCCCEEEEeee
Confidence 999986 478999999999999999999999999999999999999999999988 566543 3455667899999999
Q ss_pred CCCcceeEEEEe
Q 008146 562 GFGGHNSSIIFS 573 (576)
Q Consensus 562 G~gG~na~vil~ 573 (576)
||||+|+++||+
T Consensus 394 GfGG~n~~lvl~ 405 (405)
T PRK09116 394 AFGGINTSLIFK 405 (405)
T ss_pred cCCcccEEEEEC
Confidence 999999999985
|
|
| >PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-72 Score=606.90 Aligned_cols=409 Identities=43% Similarity=0.733 Sum_probs=361.2
Q ss_pred CCCCcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCC--------------CCCCcccccccc------CCCCC
Q 008146 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDC--------------TSFPTKIAAEIK------SFSTD 221 (576)
Q Consensus 162 ~~~~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~--------------~~~~~~~~g~v~------~fd~~ 221 (576)
...++|||||||+++|.|.++++||++|++|+++|++++++++ ..++.+.++.++ +||+.
T Consensus 3 ~~~~~VvItG~g~~~p~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~ 82 (437)
T PLN02836 3 LPTRRVVVTGLGLVTPLGCGVETTWRRLIAGECGVRALTQDDLKMKSEDEETQLYTLDQLPSRVAALVPRGTGPGDFDEE 82 (437)
T ss_pred CCCCCEEEEeeeEECCCCCCHHHHHHHHHcCCCccccCChhhhccccccccccccccccCCccEEEEeccccccccCChH
Confidence 3456899999999999999999999999999999999977653 234556666664 46666
Q ss_pred CCCChhhhhcCCHHHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHH-hhhccCCCccccc
Q 008146 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALR-ISYKKMNPFCVPF 300 (576)
Q Consensus 222 ~~i~~~~a~~mdp~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~-~~~~~~~~~~~~~ 300 (576)
.|.. .+++++..+|+++++++||+|||+.+.. ..+..++||++|++.+++..+.++...+. ...+.++|+.++.
T Consensus 83 ~~~~---~~~~~~~~~~~~~aa~~Al~dAg~~~~~--~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~ 157 (437)
T PLN02836 83 LWLN---SRSSSRFIGYALCAADEALSDARWLPSE--DEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPR 157 (437)
T ss_pred Hhcc---ccccCHHHHHHHHHHHHHHHHcCCCccc--ccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhh
Confidence 5532 4579999999999999999999997631 24568999999999888877666555443 3345678888899
Q ss_pred cccchhHHHHHHHhCCCCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhcc-CCCC
Q 008146 301 ATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR-NNDP 379 (576)
Q Consensus 301 ~~~~~~a~~ia~~lgl~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~-~~~p 379 (576)
.+.|++++++++.||++||+++|+++|+||+.||+.|+++|++|+||++||||+|..+++..+..|..++.++.. +.+|
T Consensus 158 ~~~n~~a~~is~~~gl~Gp~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p 237 (437)
T PLN02836 158 ILINMAAGHVSIRYGFQGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCP 237 (437)
T ss_pred hcccHHHHHHHHHhCCCCceeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCc
Confidence 999999999999999999999999999999999999999999999999999999998899999999999988754 4557
Q ss_pred CCCCCCCccCCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 008146 380 TKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRE 459 (576)
Q Consensus 380 ~~~~rpfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~ 459 (576)
+..|+|||.+++|+++|||++++|||++++|+++|++||++|+|++.++|+.+++.+.+++.++.+++++||+++|++++
T Consensus 238 ~~~~~pfd~~~~G~~~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~Agi~~~ 317 (437)
T PLN02836 238 TEASRPFDCDRDGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQPHEDGRGAVLAMTRALQQSGLHPN 317 (437)
T ss_pred ccccCCcccCCCCeeeecCEEEEEEeeHHHHHHCCCceEEEEEeeeecCCCCCCcCCCcchHHHHHHHHHHHHHcCCCHh
Confidence 78999999999999999999999999999999999999999999999999999988888888999999999999999999
Q ss_pred CccEEEecCCCCccCcHHHHHHHHHHHcCC---CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCC
Q 008146 460 DVNYINAHATSTPAGDIKEYQALIHCFGQN---RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDA 536 (576)
Q Consensus 460 dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~---~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~ 536 (576)
||||||+|||||+++|..|.+++.++|+.. ..++++++|+++||+++|+|++++++++++|++++|||++|+++|++
T Consensus 318 dId~ve~hgtgt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~n~~~~~p 397 (437)
T PLN02836 318 QVDYVNAHATSTPLGDAVEARAIKTVFSEHATSGGLAFSSTKGATGHLLGAAGAVEAIFSVLAIHHGIAPPTLNLERPDP 397 (437)
T ss_pred HcCEEEccCCcCcCcCHHHHHHHHHHhcccccCCCCeeECCcccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCC
Confidence 999999999999999999999999999874 25899999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCcccccCccEEEEeccCCCcceeEEEEeeC
Q 008146 537 VVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~~ 575 (576)
.++.++......+..+++.+++|||||||+|+|+||++.
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~l~nsfgfGG~na~lvl~~~ 436 (437)
T PLN02836 398 IFDDGFVPLTASKAMLIRAALSNSFGFGGTNASLLFTSP 436 (437)
T ss_pred CCCcccCcccCCCCCCccEEEEecccCCCeeEEEEEecC
Confidence 988776543333344689999999999999999999875
|
|
| >TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-72 Score=601.17 Aligned_cols=405 Identities=50% Similarity=0.846 Sum_probs=375.2
Q ss_pred CcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 008146 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 244 (576)
Q Consensus 165 ~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa~ 244 (576)
++|+|||||+++|.|.++++||++|++|+++++++++|+...++..+.+++++||++.|+++++.++||++++|++++++
T Consensus 1 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~s~~~~~~~~~~~~~~~~~~g~i~~f~~~~~~~~~~~~~~~~~~~l~~~aa~ 80 (407)
T TIGR03150 1 RRVVVTGLGAVTPLGNGVEEFWENLLAGKSGIGPITRFDASDLPVKIAGEVKDFDPEDYIDKKEARRMDRFIQYALAAAK 80 (407)
T ss_pred CcEEEEcceEECCCcCCHHHHHHHHHcCCCeeEECCcccccCCCCcEEEEeCCcChhhcCCHHHHhhcCHHHHHHHHHHH
Confidence 47999999999999999999999999999999999999988888888999999999999999999999999999999999
Q ss_pred HHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHH-hhhccCCCccccccccchhHHHHHHHhCCCCccccc
Q 008146 245 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALR-ISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 323 (576)
Q Consensus 245 eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv 323 (576)
+||+|||++++ +++..++|||+|++.+++...++++..+. .....++|+.++..+.|..++++++.||++||+++|
T Consensus 81 ~Al~dAgl~~~---~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~g~~~~v 157 (407)
T TIGR03150 81 EAVEDSGLDIE---EEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGAKGPNHAV 157 (407)
T ss_pred HHHHhcCCCcc---cCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCCCCccccc
Confidence 99999999986 66788999999999988877777666553 344567788888888999999999999999999999
Q ss_pred cCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceEEEE
Q 008146 324 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 403 (576)
Q Consensus 324 ~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAaalv 403 (576)
+++|+||+.||++|+++|++|++|++||||+|.+++|..+..|...+.++..+..|...|+|||.+++|+++|||++++|
T Consensus 158 ~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~g~~~gEGAaalv 237 (407)
T TIGR03150 158 VTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKDRDGFVMGEGAGVLV 237 (407)
T ss_pred ccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCCCCcEEEeceEEEEE
Confidence 99999999999999999999999999999999999999999999999998767777888999999999999999999999
Q ss_pred EcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHH
Q 008146 404 LEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALI 483 (576)
Q Consensus 404 L~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~ 483 (576)
|+++++|+++|++||++|+|++.++|+.+.+.+.+.+.++.++++++|+++|++++||||||+|||||+.+|..|..++.
T Consensus 238 L~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~D~~E~~a~~ 317 (407)
T TIGR03150 238 LEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRAALKDAGINPEDVDYINAHGTSTPLGDKAETKAIK 317 (407)
T ss_pred EeeHHHHHHCCCeEEEEEEEEEECCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCCCHHHHHHHH
Confidence 99999999999999999999999999998888888888999999999999999999999999999999999999999999
Q ss_pred HHHcCC-CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccC
Q 008146 484 HCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFG 562 (576)
Q Consensus 484 ~~f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG 562 (576)
++|+.. .+++|++.|+++||+++|||++++++++++|++++|||++|+++|++.++++++.. +..+++++++++||||
T Consensus 318 ~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~v~~-~~~~~~~~~~l~~s~g 396 (407)
T TIGR03150 318 RVFGDHAYKLAVSSTKSMTGHLLGAAGAIEAIFTVLAIRDGVVPPTINLDNPDPECDLDYVPN-EARERKIDYALSNSFG 396 (407)
T ss_pred HHhccCCCCCceeCCcchhchhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccCC-CCccCCcCEEEEeccc
Confidence 999864 36999999999999999999999999999999999999999999999988876543 3455678999999999
Q ss_pred CCcceeEEEEe
Q 008146 563 FGGHNSSIIFS 573 (576)
Q Consensus 563 ~gG~na~vil~ 573 (576)
|||+|+|+||+
T Consensus 397 fgG~n~~~vl~ 407 (407)
T TIGR03150 397 FGGHNASLVFK 407 (407)
T ss_pred CCCceEEEEeC
Confidence 99999999984
|
FabB sequences should fall well below the noise cutoff of this model. |
| >cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-69 Score=581.35 Aligned_cols=404 Identities=51% Similarity=0.851 Sum_probs=374.2
Q ss_pred CcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 008146 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 244 (576)
Q Consensus 165 ~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa~ 244 (576)
++|+|||||+++|.|.+.+++|++|++|++++++++.|+...++..+.+++++|+..+++++++.+.||++++|++++++
T Consensus 1 ~~i~I~G~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~aa~ 80 (406)
T cd00834 1 RRVVITGLGAVTPLGNGVEEFWEALLAGRSGIRPITRFDASGFPSRIAGEVPDFDPEDYLDRKELRRMDRFAQFALAAAE 80 (406)
T ss_pred CcEEEECcceeCCCcCCHHHHHHHHHcCCCeeEECCcccccCCCccEEEEcCCCChhhcCCHHHhccCCHHHHHHHHHHH
Confidence 36999999999999999999999999999999999998888888888999999998877999999999999999999999
Q ss_pred HHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHH-hhhccCCCccccccccchhHHHHHHHhCCCCccccc
Q 008146 245 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALR-ISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 323 (576)
Q Consensus 245 eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv 323 (576)
+||+|||++++ +++..++||++|++.+++....+++..+. .....++|+.++....+..+++++..||++||+++|
T Consensus 81 ~AL~dAgl~~~---~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~g~~~~v 157 (406)
T cd00834 81 EALADAGLDPE---ELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLGLRGPNYTV 157 (406)
T ss_pred HHHHHcCCCcc---cCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhCCCCccccc
Confidence 99999999986 57789999999999999888777776653 344567788888888899999999999999999999
Q ss_pred cCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceEEEE
Q 008146 324 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 403 (576)
Q Consensus 324 ~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAaalv 403 (576)
+++|+|++.||+.|+++|++|+||.+||||+|...+|..+..|..++.++....+|+..++|||.+++|+++|||++++|
T Consensus 158 ~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~~~g~~~geGA~a~v 237 (406)
T cd00834 158 STACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDRDGFVLGEGAGVLV 237 (406)
T ss_pred chHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCCCCCEeeeccEEEEE
Confidence 99999999999999999999999999999999988899999999999998776668889999999999999999999999
Q ss_pred EcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHH
Q 008146 404 LEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALI 483 (576)
Q Consensus 404 L~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~ 483 (576)
|++.++|+++|++||++|+|++.++|+.+.+.+.+++.++.++++++|+++|++++||||||+|||||+++|.+|.++|.
T Consensus 238 L~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~agi~~~dId~v~~h~tgt~~~d~~E~~al~ 317 (406)
T cd00834 238 LESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALADAGLSPEDIDYINAHGTSTPLNDAAESKAIK 317 (406)
T ss_pred EecHHHHHHCCCeEEEEEEEEEecccCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEecccccCccccHHHHHHHH
Confidence 99999999999999999999999999998888888899999999999999999999999999999999999999999999
Q ss_pred HHHcCC-CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccC
Q 008146 484 HCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFG 562 (576)
Q Consensus 484 ~~f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG 562 (576)
++|+.. .++++++.|+++||+++|||++++++++++|+++++||++|+++|++..+.++.. .+.++|+.|++++||||
T Consensus 318 ~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~s~g 396 (406)
T cd00834 318 RVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLALRDGVLPPTINLEEPDPECDLDYVP-NEAREAPIRYALSNSFG 396 (406)
T ss_pred HHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccC-CCCccccccEEEEeeec
Confidence 999874 4689999999999999999999999999999999999999999999877766543 34667788999999999
Q ss_pred CCcceeEEEE
Q 008146 563 FGGHNSSIIF 572 (576)
Q Consensus 563 ~gG~na~vil 572 (576)
|||+|+|+||
T Consensus 397 ~gG~n~~~vl 406 (406)
T cd00834 397 FGGHNASLVF 406 (406)
T ss_pred CCceeeEEEC
Confidence 9999999996
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. |
| >PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-69 Score=576.30 Aligned_cols=399 Identities=29% Similarity=0.425 Sum_probs=347.2
Q ss_pred CCcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCC--------CCCccccccccCCCCCCCCChhhhhcCCHH
Q 008146 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCT--------SFPTKIAAEIKSFSTDGWVAPKLSKRMDKF 235 (576)
Q Consensus 164 ~~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~--------~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~ 235 (576)
|++|||||||+++|.|.++++||++|++|+++|+++++|+.. ..+..+++++++|+.+.+++++..++|++.
T Consensus 1 m~~VvItG~g~vsp~g~~~~~~w~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 80 (410)
T PRK07103 1 MDEVVVTGVGVVSAIGQGRPSFAAALLAGRHAFGVMRRPGRQVPDDAGAGLASAFIGAELDSLALPERLDAKLLRRASLS 80 (410)
T ss_pred CCCEEEEcceEECCCcCCHHHHHHHHHcCCCeEecCCcccccccccccccCCCceEEEEeCCCChhhcCCHHHhhcCCHH
Confidence 468999999999999999999999999999999999887653 234567788988888777888889999999
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
++|++.++++||+|||++ ..+..|+|||+|++.+.......+++.+........|........+..++++++.||
T Consensus 81 ~~lal~Aa~eAl~dAgl~-----~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 155 (410)
T PRK07103 81 AQAALAAAREAWRDAALG-----PVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFG 155 (410)
T ss_pred HHHHHHHHHHHHHhcCcC-----CCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhC
Confidence 999999999999999995 345789999999887666555555544433334445655555666778999999999
Q ss_pred CCCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhcc--CCCCCCCCCCCccCCCcc
Q 008146 316 WMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR--NNDPTKASRPWDINRDGF 393 (576)
Q Consensus 316 l~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~--~~~p~~~~rpfd~~~~G~ 393 (576)
++||+++|+++|+|++.||+.|+++|++|++|+|||+|++..+++..+.+|..++.|+.. ..+|...|||||.+++|+
T Consensus 156 l~G~~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~~dG~ 235 (410)
T PRK07103 156 IRGEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDRDGF 235 (410)
T ss_pred CCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCCCCCe
Confidence 999999999999999999999999999999999999999988899999999999988754 456888999999999999
Q ss_pred eecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcc
Q 008146 394 VMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPA 473 (576)
Q Consensus 394 v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~ 473 (576)
++|||++++|||++++|+++|++||++|+|++.++|+++.+ .|+..++.++++++|+++|++++||||||+|||||+.
T Consensus 236 v~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~--~p~~~~~~~a~~~Al~~Agi~~~dId~v~~hgtgt~~ 313 (410)
T PRK07103 236 IYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANRGP--DPSLEGEMRVIRAALRRAGLGPEDIDYVNPHGTGSPL 313 (410)
T ss_pred eEeeeEEEEEEccHHHHHHCCCceEEEEEEEEEecCCCCCC--CCCHHHHHHHHHHHHHHcCCCHHHCCEEEccCCCCCC
Confidence 99999999999999999999999999999999999998854 5677788999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHHcCCCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCC-CCCCCcccccCCcccccC
Q 008146 474 GDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENP-DAVVDTNVLVGPKKERLE 552 (576)
Q Consensus 474 gD~~E~~Al~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p-~~~~~~~~~~~~~~~~~~ 552 (576)
+|..|.++|...+ ..+++|++.|+++||+++|+|++++++++++|++++|||++|+++| ++.+ +++. ...+...
T Consensus 314 ~D~~E~~al~~~~--~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~--~~v~-~~~~~~~ 388 (410)
T PRK07103 314 GDETELAALFASG--LAHAWINATKSLTGHGLSAAGIVELIATLLQMRAGFLHPSRNLDEPIDERF--RWVG-STAESAR 388 (410)
T ss_pred CCHHHHHHHhcCC--CCCCeEECCCcccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCc--CccC-CCCcCCC
Confidence 9999999993321 2358999999999999999999999999999999999999999987 4443 3322 2334446
Q ss_pred ccEEEEeccCCCcceeEEEEee
Q 008146 553 VKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 553 ~~~alv~sfG~gG~na~vil~~ 574 (576)
++++++|||||||+|+|+||++
T Consensus 389 ~~~~l~~s~gfGG~n~~~vl~~ 410 (410)
T PRK07103 389 IRYALSLSFGFGGINTALVLER 410 (410)
T ss_pred CCEEEEecccCCCceEEEEEeC
Confidence 8999999999999999999985
|
|
| >PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-69 Score=579.41 Aligned_cols=396 Identities=44% Similarity=0.760 Sum_probs=354.4
Q ss_pred eecCCCCCHHHHHHHHHcCCCcceeccCCC----------------CCCCCcccccccc--CCCCCCCCChhhhhcCCHH
Q 008146 174 LVSPLGHEPDVFYNNLLEGVSGISEIETFD----------------CTSFPTKIAAEIK--SFSTDGWVAPKLSKRMDKF 235 (576)
Q Consensus 174 ~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~----------------~~~~~~~~~g~v~--~fd~~~~i~~~~a~~mdp~ 235 (576)
+++|.|.++++||++|++|+++|+++++|+ ...++..++++++ +||+..|.. ..+++++
T Consensus 1 ~vs~~G~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~f~~~~~~~---~~~~~~~ 77 (421)
T PTZ00050 1 VVTPLGVGAESTWEALIAGKSGIRKLTEFPKFLPDCIPEQKALENLVAAMPCQIAAEVDQSEFDPSDFAP---TKRESRA 77 (421)
T ss_pred CCCCCcCCHHHHHHHHHcCCCeeecCCchhhcccccccccccccccccCCCCceEEECCcccCChhHcCC---cccCCHH
Confidence 478999999999999999999999998876 4456777888887 577766632 2246999
Q ss_pred HHHHHHHHHHHHHhCCCC-hhhhhcccCCeeEEEEcccCCchhHHHHHHHHH-HhhhccCCCccccccccchhHHHHHHH
Q 008146 236 MLYLLTAGKKALADGGIT-EDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMD 313 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~-~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~a~~ia~~ 313 (576)
++|++.++++||+|||++ ++ +++..++|+++|++.+++....+++..+ ....+.++++.++..+.|.++++|++.
T Consensus 78 ~~l~~~aa~~Al~dAGl~~~~---~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~ 154 (421)
T PTZ00050 78 THFAMAAAREALADAKLDILS---EKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIK 154 (421)
T ss_pred HHHHHHHHHHHHHHcCCCccc---ccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHH
Confidence 999999999999999998 55 5667899999999998887666655554 334556778888999999999999999
Q ss_pred hCCCCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhcc-CCCCCCCCCCCccCCCc
Q 008146 314 LGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR-NNDPTKASRPWDINRDG 392 (576)
Q Consensus 314 lgl~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~-~~~p~~~~rpfd~~~~G 392 (576)
||++||+++|+++|+||+.||.+|+++|++|++|++||||+|.+++|..+..|.+++.++.. +.+|+..|||||.+++|
T Consensus 155 ~~l~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~~G 234 (421)
T PTZ00050 155 HKLKGPSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDRAG 234 (421)
T ss_pred hCCCCcccccccHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCCCC
Confidence 99999999999999999999999999999999999999999998899999999999988754 45678899999999999
Q ss_pred ceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHH-cCCCCCCccEEEecCCCC
Q 008146 393 FVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAH-SGVSREDVNYINAHATST 471 (576)
Q Consensus 393 ~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~-Agl~~~dId~ve~Hgtgt 471 (576)
+++|||++++|||++++|+++|++||++|+|++.++|+++.+.|.|++.++.++|++||++ +|++++||||||+|||||
T Consensus 235 ~~~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt 314 (421)
T PTZ00050 235 FVMGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKDGANININDVDYVNAHATST 314 (421)
T ss_pred EeeccceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCChHHHHHHHHHHHHhccCCChhhCCEEECCCccC
Confidence 9999999999999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred ccCcHHHHHHHHHHHcCC--CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccc
Q 008146 472 PAGDIKEYQALIHCFGQN--RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKE 549 (576)
Q Consensus 472 ~~gD~~E~~Al~~~f~~~--~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~ 549 (576)
+++|.+|.+++.++|+.. .+++|+++|+++||+++|+|++++++++++|++++|||++|+++|++.++.+++......
T Consensus 315 ~~~D~~E~~al~~~~~~~~~~~~~v~s~K~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~l~~~~~~~~~ 394 (421)
T PTZ00050 315 PIGDKIELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGAVESIVTILSLYEQIIPPTINLENPDAECDLNLVQGKTAH 394 (421)
T ss_pred CCCCHHHHHHHHHHhccccCCCceEECccccccccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCccccCCcccC
Confidence 999999999999999864 468999999999999999999999999999999999999999999998887765543222
Q ss_pred c-cCccEEEEeccCCCcceeEEEEeeC
Q 008146 550 R-LEVKAALSNSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 550 ~-~~~~~alv~sfG~gG~na~vil~~~ 575 (576)
. ..++.+++|||||||+|+|+||++|
T Consensus 395 ~~~~~~~~l~nsfgfgG~n~~lvl~~~ 421 (421)
T PTZ00050 395 PLQSIDAVLSTSFGFGGVNTALLFTKY 421 (421)
T ss_pred cCCCCCEEEEeeecCCCeeEEEEEeCC
Confidence 2 2579999999999999999999986
|
|
| >cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-69 Score=576.09 Aligned_cols=393 Identities=37% Similarity=0.581 Sum_probs=357.3
Q ss_pred cEEEEecceecCCCCC---HHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcC---CHHHHHH
Q 008146 166 RVVVTGMGLVSPLGHE---PDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRM---DKFMLYL 239 (576)
Q Consensus 166 ~IaItGmg~~~P~g~~---~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~m---dp~~rl~ 239 (576)
+|||||||+++|.|.+ +++||++|.+|+++|+++++|+ ..++..+.+++++|+ +++++.+++ |++++|+
T Consensus 2 ~v~ItG~g~v~p~g~~~~~~~~~w~~l~~g~s~i~~~~~~~-~~~~~~~~g~i~~~~----~~~~~~~~~~~~~~~~~l~ 76 (407)
T cd00828 2 RVVITGIGVVSPHGEGCDEVEEFWEALREGRSGIAPVARLK-SRFDRGVAGQIPTGD----IPGWDAKRTGIVDRTTLLA 76 (407)
T ss_pred CEEEECceeecCCCCCCCCHHHHHHHHHcCCCceeeCCccc-ccCCccEEEEccCCC----cCHHHHHhccCCCHHHHHH
Confidence 6999999999999999 9999999999999999999887 567778888888776 677888888 9999999
Q ss_pred HHHHHHHHHhCCCChhhhhc-ccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCcccccccc--chhHHHHHHHhCC
Q 008146 240 LTAGKKALADGGITEDVMNE-LDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATT--NMGSAMLAMDLGW 316 (576)
Q Consensus 240 l~aa~eAL~dAGi~~~~i~~-~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~a~~ia~~lgl 316 (576)
++++++||+|||++++ + ++..++||++|++.+++......+..+. +..+++.++..+. +..++++++.||+
T Consensus 77 ~~aa~~Al~dAGl~~~---~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T cd00828 77 LVATEEALADAGITDP---YEVHPSEVGVVVGSGMGGLRFLRRGGKLDA---RAVNPYVSPKWMLSPNTVAGWVNILLLS 150 (407)
T ss_pred HHHHHHHHHhCCCCcc---ccCCccCeEEEEeeccCCHHHHHHHHHHHh---hccCCcccchhccccchHHHHHHHHhCc
Confidence 9999999999999875 4 6778999999999988877666554432 4566777787777 9999999999999
Q ss_pred -CCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCccee
Q 008146 317 -MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVM 395 (576)
Q Consensus 317 -~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~ 395 (576)
+||+++|+++|+|++.||+.|+++|++|++|++||||+|.+. |..+..|..++.++.....|...|+|||.+++|+++
T Consensus 151 ~~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~-~~~~~~f~~~~~ls~~~~~~~~~~~pfd~~~~G~~~ 229 (407)
T cd00828 151 SHGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPL-EEGLSGFANMGALSTAEEEPEEMSRPFDETRDGFVE 229 (407)
T ss_pred CCCCCcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccC-hHHHHHHHHcCCCCCCCCCCCcccCCCcCCCCcEEe
Confidence 999999999999999999999999999999999999999987 888999999999987666677899999999999999
Q ss_pred cCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCc
Q 008146 396 GEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGD 475 (576)
Q Consensus 396 gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD 475 (576)
|||++++|||++++|+++|++||++|.|++.++|+++...+. ++.++.++|+++|+++|++++||||||+|||||+.+|
T Consensus 230 gEGAaalvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~-~~~~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~~D 308 (407)
T cd00828 230 AEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVPA-GGKGIARAIRTALAKAGLSLDDLDVISAHGTSTPAND 308 (407)
T ss_pred ecceEEEEEeeHHHHHHCCCeEEEEEEEEEeccCCCCCCCCC-ChHHHHHHHHHHHHHcCCCHHHcCEEecccccCcccc
Confidence 999999999999999999999999999999999999887766 7889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCC-CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccC--
Q 008146 476 IKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLE-- 552 (576)
Q Consensus 476 ~~E~~Al~~~f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~-- 552 (576)
..|.++++++|+.. .+++++++|+++||+++|+|++++++++++|+++++||++|++.|++.++.+++. .+.++++
T Consensus 309 ~~E~~ai~~~~~~~~~~~~v~s~K~~~Gh~~~Asg~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~-~~~~~~~~~ 387 (407)
T cd00828 309 VAESRAIAEVAGALGAPLPVTAQKALFGHSKGAAGALQLIGALQSLEHGLIPPTANLDDVDPDVEHLSVV-GLSRDLNLK 387 (407)
T ss_pred HHHHHHHHHHHhccCCCceeecccchhccchhhhhHHHHHHHHHHHhcCccCCCCCCCCCCccccccccc-CcCccCCCC
Confidence 99999999999875 3589999999999999999999999999999999999999999999988766543 3445555
Q ss_pred ccEEEEeccCCCcceeEEEE
Q 008146 553 VKAALSNSFGFGGHNSSIIF 572 (576)
Q Consensus 553 ~~~alv~sfG~gG~na~vil 572 (576)
++.+++|||||||+|+|+|+
T Consensus 388 ~~~al~~s~gfgG~n~~lv~ 407 (407)
T cd00828 388 VRAALVNAFGFGGSNAALVL 407 (407)
T ss_pred ccEEEEecccCCCcceEEEC
Confidence 49999999999999999986
|
They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. |
| >PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-67 Score=553.23 Aligned_cols=377 Identities=34% Similarity=0.536 Sum_probs=328.1
Q ss_pred CCcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 008146 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 243 (576)
Q Consensus 164 ~~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa 243 (576)
|++|||||||+++|.|. +++||++|++|+++|++++.|+. ++....+.+. + .+ ..++ ++...++
T Consensus 1 ~~rVvITG~G~vsp~G~-~~~~~~~l~~G~sgi~~~~~~~~--~~~~~~~~~~-~------~~---~~~~---~~~~~a~ 64 (381)
T PRK05952 1 MMKVVVTGIGLVSALGD-LEQSWQRLLQGKSGIKLHQPFPE--LPPLPLGLIG-N------QP---SSLE---DLTKTVV 64 (381)
T ss_pred CCeEEEEeeEEECcccC-HHHHHHHHHcCCCCeEeCCcccc--cccccceeec-c------cc---cccc---HHHHHHH
Confidence 46899999999999999 99999999999999999887752 1111111110 0 01 1233 3566889
Q ss_pred HHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhh----ccCCCccccccccchhHHHHHHHhCCCCc
Q 008146 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISY----KKMNPFCVPFATTNMGSAMLAMDLGWMGP 319 (576)
Q Consensus 244 ~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp 319 (576)
.+||+|+|++++ ..|+||++|++.++...++++...+.... ...+|..++..+.|.+++++++.||++||
T Consensus 65 ~~Al~dagl~~~------~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~Gp 138 (381)
T PRK05952 65 TAALKDAGLTPP------LTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQGP 138 (381)
T ss_pred HHHHHhcCCCCC------CCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCCCc
Confidence 999999999752 36899999999998877777666543211 24566777788899999999999999999
Q ss_pred cccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCce
Q 008146 320 NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGA 399 (576)
Q Consensus 320 ~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGA 399 (576)
+++++++|+||+.||..|+++|+.|++|++||||+|..++|..+..|..++.++. ..|||||.+++|+++|||+
T Consensus 139 ~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~------~~~rPfd~~r~G~v~gEGa 212 (381)
T PRK05952 139 VLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAK------TGAYPFDRQREGLVLGEGG 212 (381)
T ss_pred cccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCC------CCCCCCCCCCCCccccccE
Confidence 9999999999999999999999999999999999999899999999999999873 3599999999999999999
Q ss_pred EEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHH
Q 008146 400 GVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEY 479 (576)
Q Consensus 400 aalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~ 479 (576)
+++|||++++|+++|++||++|+|++.++|+++.+.+.|++.++.++|+++|+++|++|+||||||+|||||+.+|..|.
T Consensus 213 a~lvLe~~~~A~~rg~~i~a~I~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~D~~E~ 292 (381)
T PRK05952 213 AILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLARSGLTPEDIDYIHAHGTATRLNDQREA 292 (381)
T ss_pred EEEEEeeHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHeeEEEccCCCCCCCcHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEe
Q 008146 480 QALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSN 559 (576)
Q Consensus 480 ~Al~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~ 559 (576)
++|.++|+. .++|++.|+++||+++|+|++++++++++|++++|||++|+++|+..+ +++. ++...+++++++|
T Consensus 293 ~al~~~fg~--~~~v~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~--~~v~--~~~~~~~~~~l~~ 366 (381)
T PRK05952 293 NLIQALFPH--RVAVSSTKGATGHTLGASGALGVAFSLLALRHQQLPPCVGLQEPEFDL--NFVR--QAQQSPLQNVLCL 366 (381)
T ss_pred HHHHHHcCC--CCeeecchhhhccChHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCC--CcCC--CcccCCCCEEEEe
Confidence 999999985 489999999999999999999999999999999999999999886543 4332 2344568999999
Q ss_pred ccCCCcceeEEEEee
Q 008146 560 SFGFGGHNSSIIFSP 574 (576)
Q Consensus 560 sfG~gG~na~vil~~ 574 (576)
||||||+|+++||++
T Consensus 367 s~gfGG~na~lvl~~ 381 (381)
T PRK05952 367 SFGFGGQNAAIALGK 381 (381)
T ss_pred eecCCCeeEEEEEeC
Confidence 999999999999975
|
|
| >PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-65 Score=549.97 Aligned_cols=403 Identities=36% Similarity=0.488 Sum_probs=347.7
Q ss_pred CCcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 008146 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 243 (576)
Q Consensus 164 ~~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa 243 (576)
+.+|+|||||+++|.|.+.++||++|++|+++|+++++|+...++.+++++++.++.. ....+++.+++.+.++
T Consensus 10 ~~~VvITG~G~vs~~G~~~~~~~~~L~~G~s~i~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~~~~~~~~~~aa 83 (425)
T PRK06501 10 RPIVAVTGMGVVTSLGQGKADNWAALTAGESGIHTITRFPTEGLRTRIAGTVDFLPES------PFGASALSEALARLAA 83 (425)
T ss_pred CcCEEEEeeeEECCCCCCHHHHHHHHHcCCCceEcCCcccccCCCCceEEEEeecccc------cccccCHHHHHHHHHH
Confidence 4579999999999999999999999999999999999999888888888887533322 2234677889999999
Q ss_pred HHHHHhCCCChhhhh-----------cccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHH
Q 008146 244 KKALADGGITEDVMN-----------ELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAM 312 (576)
Q Consensus 244 ~eAL~dAGi~~~~i~-----------~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~ 312 (576)
++||+|||+....+. ...+.+++++.+........+. ..+........+..++....+..+.+++.
T Consensus 84 ~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~a~~i~~ 160 (425)
T PRK06501 84 EEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYD---RLLRAARGGRFDALHERFQFGSIADRLAD 160 (425)
T ss_pred HHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHH---HHHhhcCcccCChhhhhhcccHHHHHHHH
Confidence 999999999643110 0124688888887654322111 11111122222334455567788999999
Q ss_pred HhCCCCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCc
Q 008146 313 DLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDG 392 (576)
Q Consensus 313 ~lgl~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G 392 (576)
.||++||+++|+++|+|++.||++|+++|++|++|++||||+|..+++..+..|..++.++.....|+..|||||.+++|
T Consensus 161 ~~gl~G~~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~r~G 240 (425)
T PRK06501 161 RFGTRGLPISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKASKPFSKDRDG 240 (425)
T ss_pred HhCCCCCceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccCCCCCCcccCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999899999999999999987777788899999999999
Q ss_pred ceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCc
Q 008146 393 FVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTP 472 (576)
Q Consensus 393 ~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~ 472 (576)
+++|||++++|||++++|+++|++||++|.|++.++|+++.+.+.|++..+.++|+++|+++|++++|||||++|||||+
T Consensus 241 ~v~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~AL~~agi~p~dId~i~~Hgtgt~ 320 (425)
T PRK06501 241 FVMAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPDGSPAIGAIRAALADAGLTPEQIDYINAHGTSTP 320 (425)
T ss_pred eeeeccEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEecCccCc
Confidence 99999999999999999999999999999999999999988888888889999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHHHcCC-CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccc
Q 008146 473 AGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERL 551 (576)
Q Consensus 473 ~gD~~E~~Al~~~f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~ 551 (576)
.+|..|..+|.++|+.. ..++|++.|+++||+++|+|++++++++++|++++|||++|+++|++.+++++... +....
T Consensus 321 ~~d~~E~~al~~~~~~~~~~~pv~s~k~~~Gh~~~AsG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~~~~~~-~~~~~ 399 (425)
T PRK06501 321 ENDKMEYLGLSAVFGERLASIPVSSNKSMIGHTLTAAGAVEAVFSLLTIQTGRLPPTINYDNPDPAIPLDVVPN-VARDA 399 (425)
T ss_pred chHHHHHHHHHHHhcccCCCcEEECCCcccCCCchhhhHHHHHHHHHHHhcCcCCCcCCCCCCCCCCCcccCCC-cccCC
Confidence 99999999999999854 46899999999999999999999999999999999999999999999998876533 34455
Q ss_pred CccEEEEeccCCCcceeEEEEeeCC
Q 008146 552 EVKAALSNSFGFGGHNSSIIFSPYK 576 (576)
Q Consensus 552 ~~~~alv~sfG~gG~na~vil~~~~ 576 (576)
+++.+++|||||||+|+|+||++|.
T Consensus 400 ~~~~~l~ns~gfgG~n~~~vl~~~~ 424 (425)
T PRK06501 400 RVTAVLSNSFGFGGQNASLVLTAEP 424 (425)
T ss_pred CCCEEEEeCccCCCeeEEEEEecCC
Confidence 7899999999999999999999873
|
|
| >PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-65 Score=533.15 Aligned_cols=338 Identities=41% Similarity=0.652 Sum_probs=312.4
Q ss_pred CCHHHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHH-HhhhccCCCccccccccchhHHHH
Q 008146 232 MDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAML 310 (576)
Q Consensus 232 mdp~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~a~~i 310 (576)
|++..++++.++++||+|||+. .+..|+||++|++.+++..+.++++.+ ..+.+.++|+.++..+.|.+++++
T Consensus 1 ~~~~~~~~~~a~~~a~~~a~~~------~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~i 74 (342)
T PRK14691 1 MGRWWRYKWITFHPSLTHADNT------EKQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHV 74 (342)
T ss_pred CCHHHHHHHHHHHHHHHhCCCC------CCcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHH
Confidence 5788999999999999999975 235689999999999998888776655 345567899999999999999999
Q ss_pred HHHhCCCCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhcc-CCCCCCCCCCCccC
Q 008146 311 AMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR-NNDPTKASRPWDIN 389 (576)
Q Consensus 311 a~~lgl~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~-~~~p~~~~rpfd~~ 389 (576)
++.||++||+++|+++|+|++.||..|+++|+.|++|++||||+|..++|..+.+|..++.|+.. +.+|++.|||||.+
T Consensus 75 s~~~~l~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~ 154 (342)
T PRK14691 75 SIKHHFKGPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTA 154 (342)
T ss_pred HHHhCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999854 56688999999999
Q ss_pred CCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q 008146 390 RDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHAT 469 (576)
Q Consensus 390 ~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgt 469 (576)
++||++|||++++|||++++|+++|++||++|+|++.++|+++.+.+.|++.++.++|+++|+++|++++||||||+|||
T Consensus 155 r~G~v~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~d~~~~~~p~p~~~~~~~ai~~AL~~Agl~p~dIdyIeaHgt 234 (342)
T PRK14691 155 RDGFVMGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTSGAEDGDGAYRAMKIALRQAGITPEQVQHLNAHAT 234 (342)
T ss_pred CCCccccceEEEEEEeeHHHHHhCCCCceEEEEEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCC
Confidence 99999999999999999999999999999999999999999998888899999999999999999999999999999999
Q ss_pred CCccCcHHHHHHHHHHHcCCCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCC-cccccCCcc
Q 008146 470 STPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD-TNVLVGPKK 548 (576)
Q Consensus 470 gt~~gD~~E~~Al~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~-~~~~~~~~~ 548 (576)
||+.+|.+|..+|+++|+....++|+++|+++||+++|+|++++++++++|++++|||++|+++|++.++ .+++. .+.
T Consensus 235 gT~~~D~~E~~Ai~~~fg~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ippt~n~~~~d~~~~~~~~v~-~~~ 313 (342)
T PRK14691 235 STPVGDLGEINAIKHLFGESNALAITSTKSATGHLLGAAGGLETIFTVLALRDQIVPATLNLENPDPAAKGLNIIA-GNA 313 (342)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCceEECCcccccCCcchhhHHHHHHHHHHHhCCccCCcCCCCCCCccccccCccc-CCC
Confidence 9999999999999999987656899999999999999999999999999999999999999999999874 55543 344
Q ss_pred cccCccEEEEeccCCCcceeEEEEeeCC
Q 008146 549 ERLEVKAALSNSFGFGGHNSSIIFSPYK 576 (576)
Q Consensus 549 ~~~~~~~alv~sfG~gG~na~vil~~~~ 576 (576)
++++++++++|||||||+|+|+||++|.
T Consensus 314 ~~~~~~~al~nsfgfGG~n~~lvl~~~~ 341 (342)
T PRK14691 314 QPHDMTYALSNGFGFAGVNASILLKRWV 341 (342)
T ss_pred ccCCCCEEEEeCccCCCeeEEEEEeecc
Confidence 5567899999999999999999999984
|
|
| >smart00825 PKS_KS Beta-ketoacyl synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-64 Score=544.51 Aligned_cols=395 Identities=31% Similarity=0.494 Sum_probs=348.1
Q ss_pred EEEEecceecCCCCCHHHHHHHHHcCCCcceecc--CCCCCCC------------Ccccccccc---CCCCCCC-CChhh
Q 008146 167 VVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIE--TFDCTSF------------PTKIAAEIK---SFSTDGW-VAPKL 228 (576)
Q Consensus 167 IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~--~~~~~~~------------~~~~~g~v~---~fd~~~~-i~~~~ 228 (576)
|+|||||+++|.|.++++||++|.+|++++++++ +|+...+ ....++.++ +||+..| +++++
T Consensus 1 v~ItG~g~~~p~g~~~~~~~~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~~~~~i~~~~ 80 (424)
T smart00825 1 IAIVGMSCRFPGADSPEEFWDLLREGRDAITEIPADRWDADAFYYDPDPDRPGKSYVRWGGFLDDVDLFDAAFFGISPRE 80 (424)
T ss_pred CEEEEEEeeCCCCCCHHHHHHHHHcCCcccccCChHHcCccccccccccccCCCcccccceecCchhhCCHhHcCCCHHH
Confidence 6899999999999999999999999999999885 5655432 334455443 5777777 89999
Q ss_pred hhcCCHHHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHH
Q 008146 229 SKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSA 308 (576)
Q Consensus 229 a~~mdp~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~ 308 (576)
.+.||++++|+++++.+||+|||++++ +++.+|+|||+|+..+++ ...+.......+++.++....+..+.
T Consensus 81 ~~~~~~~~~l~~~aa~~Al~dAGl~~~---~id~~~~gv~~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~a~ 151 (424)
T smart00825 81 AEAMDPQQRLLLEVAWEALEDAGIDPE---SLRGSRTGVFVGAMSSDY------AELLARDPEDIEGYAATGTARSFIAN 151 (424)
T ss_pred HHhcCHHHHHHHHHHHHHHHHcCCChh---HcCCCCCEEEEEEcHHHH------HHHHhhCccccchhhhccchhHHHHH
Confidence 999999999999999999999999986 566789999999875432 22223344556677777777888999
Q ss_pred HHHHHhCCCCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCcc
Q 008146 309 MLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDI 388 (576)
Q Consensus 309 ~ia~~lgl~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~ 388 (576)
+++..+|++||+++|+++|+|++.||..|+++|++|++|+|||||+|...++..+..|...+.++ +++.++|||.
T Consensus 152 ~i~~~lgl~g~~~~v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~-----~~~~~~pf~~ 226 (424)
T smart00825 152 RISYFFDLRGPSVTVDTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLS-----PDGRCKTFDA 226 (424)
T ss_pred HHHHHhCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCC-----CCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999988888888888888877 6678999999
Q ss_pred CCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecC
Q 008146 389 NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHA 468 (576)
Q Consensus 389 ~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hg 468 (576)
+++|+++|||++++||+++++|+++|++||++|+|++.++++++.....|+..++..+++++|+++|++++|||||++||
T Consensus 227 ~~~g~~~geGAaalVLe~~e~A~~~g~~i~a~I~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId~i~~h~ 306 (424)
T smart00825 227 DADGYVRGEGVGVVVLKRLSDALRDGDPILAVIRGSAVNQDGRSNGLTAPSGPAQARLIRQALARAGVDPADVDYVEAHG 306 (424)
T ss_pred CCCcccccceEEEEEEccHHHHHHCCCeEEEEEEEEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHhCCCHHHccEEEeeC
Confidence 99999999999999999999999999999999999999999987766778888999999999999999999999999999
Q ss_pred CCCccCcHHHHHHHHHHHcCC----CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcc---
Q 008146 469 TSTPAGDIKEYQALIHCFGQN----RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTN--- 541 (576)
Q Consensus 469 tgt~~gD~~E~~Al~~~f~~~----~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~--- 541 (576)
|||+.+|..|.++|.++|+.. .+++|++.|+++||+.+|+|++++++++++|++++|||++|+++|++.+++.
T Consensus 307 tgt~~~d~~E~~al~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~ 386 (424)
T smart00825 307 TGTPLGDPIEAEALAAVFGQGRPRDGPLLLGSVKSNIGHLEAAAGVAGLIKVVLALRHGTIPPTLHFETPNPHIDLEESP 386 (424)
T ss_pred CCCCCCCHHHHHHHHHHHhccCCCCCceEEeccccccCCcccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcccCc
Confidence 999999999999999999853 3588999999999999999999999999999999999999999999988754
Q ss_pred cccCCccccc----CccEEEEeccCCCcceeEEEEeeC
Q 008146 542 VLVGPKKERL----EVKAALSNSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 542 ~~~~~~~~~~----~~~~alv~sfG~gG~na~vil~~~ 575 (576)
+++..+..++ .++.+++|||||||+|+|+||++|
T Consensus 387 ~~~~~~~~~~~~~~~~~~~l~~s~gfgg~n~~lvl~~~ 424 (424)
T smart00825 387 LRVPTEATPWPATGRPRRAGVSSFGFGGTNAHVILEEA 424 (424)
T ss_pred eEccCCCcCCCCCCCccEEEEeccCCCCceEEEEEecC
Confidence 2333334433 489999999999999999999987
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. |
| >cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-64 Score=539.43 Aligned_cols=394 Identities=32% Similarity=0.526 Sum_probs=345.5
Q ss_pred CcEEEEecceecCCCCCHHHHHHHHHcCCCcceecc--CCCCCCC----------CccccccccC---CCCCCC-CChhh
Q 008146 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIE--TFDCTSF----------PTKIAAEIKS---FSTDGW-VAPKL 228 (576)
Q Consensus 165 ~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~--~~~~~~~----------~~~~~g~v~~---fd~~~~-i~~~~ 228 (576)
++|||||||+++|.|.++++||++|.+|++++++++ +|+...+ +...++.+++ ||...| +++++
T Consensus 1 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~ 80 (421)
T cd00833 1 EPIAIVGMACRFPGAADPDEFWENLLEGRDAISEIPEDRWDADGYYPDPGKPGKTYTRRGGFLDDVDAFDAAFFGISPRE 80 (421)
T ss_pred CCEEEEceeeECCCCCCHHHHHHHHHcCCCcCcCCChhHcCccccccccccCCCcceecceecCCcccCCHhHcCCCHHH
Confidence 369999999999999999999999999999999885 4554322 3445666665 565555 89999
Q ss_pred hhcCCHHHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHH
Q 008146 229 SKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSA 308 (576)
Q Consensus 229 a~~mdp~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~ 308 (576)
.+.||++++|+++++++||+|||++++ +++..++||++|+..+.+.. ........++++.++....+..+.
T Consensus 81 ~~~~~~~~~l~~~aa~~AL~dAgl~~~---~~~~~~~gv~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~a~ 151 (421)
T cd00833 81 AEAMDPQQRLLLEVAWEALEDAGYSPE---SLAGSRTGVFVGASSSDYLE------LLARDPDEIDAYAATGTSRAFLAN 151 (421)
T ss_pred HHhcCHHHHHHHHHHHHHHHHcCCCch---hcCCCCceEEeCcCHHHHHH------HHhhcccccCcccccCcchHHHHH
Confidence 999999999999999999999999876 56788999999988653321 122223346777788888888999
Q ss_pred HHHHHhCCCCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCcc
Q 008146 309 MLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDI 388 (576)
Q Consensus 309 ~ia~~lgl~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~ 388 (576)
++++.+|++||+++++++|+|++.||..|+++|++|++|++||||+|.+.++..+..|...+.++ +...++|||.
T Consensus 152 ~i~~~~gl~g~~~~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~-----~~~~~~pf~~ 226 (421)
T cd00833 152 RISYFFDLRGPSLTVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLS-----PDGRCRPFDA 226 (421)
T ss_pred HHHHHcCCCCCceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCC-----CCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999988888888888888877 5668999999
Q ss_pred CCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecC
Q 008146 389 NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHA 468 (576)
Q Consensus 389 ~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hg 468 (576)
+++|+++|||++++||+++++|+++|+++|++|+|++.++|+.+.....|+..++.++++++|+++|++++||||||+||
T Consensus 227 ~~~g~~~geGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~p~~~~~~~a~~~al~~Agi~~~did~i~~hg 306 (421)
T cd00833 227 DADGYVRGEGVGVVVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQAALIRRAYARAGVDPSDIDYVEAHG 306 (421)
T ss_pred CCCCeeeeceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHCcEEEeeC
Confidence 99999999999999999999999999999999999999999887766777889999999999999999999999999999
Q ss_pred CCCccCcHHHHHHHHHHHcCC----CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcc---
Q 008146 469 TSTPAGDIKEYQALIHCFGQN----RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTN--- 541 (576)
Q Consensus 469 tgt~~gD~~E~~Al~~~f~~~----~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~--- 541 (576)
|||+.+|..|.++|.++|+.. .++++++.|+++||+++|+|++++++++++|+++.+||++|+++|++.++++
T Consensus 307 tgt~~~D~~E~~al~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~ 386 (421)
T cd00833 307 TGTPLGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVVLALEHGVIPPNLHFETPNPKIDFEESP 386 (421)
T ss_pred CCCCCCCHHHHHHHHHHHhccCCCCCceeeecCcCccccchhhhHHHHHHHHHHHHhcCCcCCcCCCCCCCCCCCcccCC
Confidence 999999999999999999874 3689999999999999999999999999999999999999999999988742
Q ss_pred cccCCcccccC----ccEEEEeccCCCcceeEEEE
Q 008146 542 VLVGPKKERLE----VKAALSNSFGFGGHNSSIIF 572 (576)
Q Consensus 542 ~~~~~~~~~~~----~~~alv~sfG~gG~na~vil 572 (576)
.++..+..+++ ++++++|||||||+|+|+||
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~sfgfgg~n~~~vl 421 (421)
T cd00833 387 LRVPTEARPWPAPAGPRRAGVSSFGFGGTNAHVIL 421 (421)
T ss_pred eEeeCCCccCCCCCCCeEEEEeCcCCCCceeEEeC
Confidence 22333333333 79999999999999999986
|
PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. |
| >PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-62 Score=519.77 Aligned_cols=386 Identities=32% Similarity=0.456 Sum_probs=329.2
Q ss_pred CCcEEEEecceecCCCCCHHHHHHHHHcCC-CcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHH
Q 008146 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGV-SGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTA 242 (576)
Q Consensus 164 ~~~IaItGmg~~~P~g~~~~~~w~~L~~G~-~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~a 242 (576)
|++|||||+|+++|.|.++++||++|++|+ ++|++++.|+.. ++.. .+.+++|+. .+++.+..+.+++..++.+.+
T Consensus 1 m~~VvITG~G~vsp~G~~~~~~~~~l~~G~~sgi~~~~~~~~~-~~~~-~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~a 77 (392)
T PRK09185 1 MTPVYISAFGATSALGRGLDAILAALRAGRASGMRPCDFWLVD-LPTW-VGEVVGVEL-PALPAALAAFDCRNNRLALLA 77 (392)
T ss_pred CCcEEEEeeEEECCCcCCHHHHHHHHHcCCCCCeEeCcccccc-CCeE-EEEecCccc-ccCCHHHHhcCCHHHHHHHHH
Confidence 568999999999999999999999999999 999999877653 4333 356776763 446666777888888887777
Q ss_pred HHH---HHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhc-cCCCccccccccchhHHHHHHHhCCCC
Q 008146 243 GKK---ALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYK-KMNPFCVPFATTNMGSAMLAMDLGWMG 318 (576)
Q Consensus 243 a~e---AL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~a~~ia~~lgl~G 318 (576)
+.+ +++|++ . +.+..|+||++|++.++.....+.+..+..... ...++.++....+..+.++++.||++|
T Consensus 78 ~~~~~~a~~~~~---~---~~~~~r~gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G 151 (392)
T PRK09185 78 LQQIEPAVEAAI---A---RYGADRIGVVLGTSTSGILEGELAYRRRDPAHGALPADYHYAQQELGSLADFLRAYLGLSG 151 (392)
T ss_pred HHHHHHHHHhhc---c---cCCCCcEEEEEeeCCccHHHHHHHHHHHhhccCCCCCchhhhhhcccHHHHHHHHHhCCCC
Confidence 666 555554 1 345679999999999988877766555432211 224556677788899999999999999
Q ss_pred ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCc
Q 008146 319 PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEG 398 (576)
Q Consensus 319 p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEG 398 (576)
|+++++++|+|++.||..|+++|++|++|.|||||+|. ..+..+..|..++.++ .+.|+|||.+++|+++|||
T Consensus 152 p~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~-~~~~~~~~~~~~~~l~------~~~~~Pfd~~~~G~~~gEG 224 (392)
T PRK09185 152 PAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDS-LCRLTLNGFNSLESLS------PQPCRPFSANRDGINIGEA 224 (392)
T ss_pred CcccccChhHHHHHHHHHHHHHHHcCCCCEEEEeeccc-cChHHHHHHHhccccC------CCccCCCcCCCCccceece
Confidence 99999999999999999999999999999999999997 4566667777777765 3579999999999999999
Q ss_pred eEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHH
Q 008146 399 AGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKE 478 (576)
Q Consensus 399 AaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E 478 (576)
++++|||++ ++.+ ++|.|++.++|+++...+.|++.++.++++++|+++|++++|||||++|||||+.+|..|
T Consensus 225 aa~vVLe~~-----~~~~--~~I~g~g~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~D~~E 297 (392)
T PRK09185 225 AAFFLLERE-----DDAA--VALLGVGESSDAHHMSAPHPEGLGAILAMQQALADAGLAPADIGYINLHGTATPLNDAME 297 (392)
T ss_pred EEEEEEEEc-----CCCc--EEEEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEeCCCCCcCCCHHH
Confidence 999999987 2333 579999999999998888899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEE
Q 008146 479 YQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALS 558 (576)
Q Consensus 479 ~~Al~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv 558 (576)
..+|.++|+.. +||++.|+++||+++|||++++++++++|++|++||++|+++|++.++.++++. +...+.++++++
T Consensus 298 ~~al~~~f~~~--~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~ 374 (392)
T PRK09185 298 SRAVAAVFGDG--VPCSSTKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDPALPPLYLVE-NAQALAIRYVLS 374 (392)
T ss_pred HHHHHHHhCCC--CceeCCCcccccChhhcchHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccccCC-CCccCCCCEEEE
Confidence 99999999864 679999999999999999999999999999999999999999999988765443 345556899999
Q ss_pred eccCCCcceeEEEEeeC
Q 008146 559 NSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 559 ~sfG~gG~na~vil~~~ 575 (576)
|||||||+|+|+||++.
T Consensus 375 ~s~gfgG~n~~lvl~~~ 391 (392)
T PRK09185 375 NSFAFGGNNCSLIFGRA 391 (392)
T ss_pred eCccCCceeEEEEEEeC
Confidence 99999999999999874
|
|
| >PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-62 Score=516.34 Aligned_cols=375 Identities=21% Similarity=0.261 Sum_probs=313.5
Q ss_pred CCCcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChh-hhhcCCHHHHHHHH
Q 008146 163 KQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPK-LSKRMDKFMLYLLT 241 (576)
Q Consensus 163 ~~~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~-~a~~mdp~~rl~l~ 241 (576)
..++|||||||+++|.|.++++||++|.+|+++ ..++.++...++.... .+++.+.+++++ +.++||+.++|++.
T Consensus 4 ~~~rVvITGiG~vsp~G~~~e~~w~aL~~G~sg-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~r~~~r~~~~a~~ 79 (398)
T PRK06519 4 QPNDVVITGIGLVSSLGEGLDAHWNALSAGRPQ-PNVDTETFAPYPVHPL---PEIDWSQQIPKRGDQRQMETWQRLGTY 79 (398)
T ss_pred CCCCEEEEcceEECCCCCCHHHHHHHHHcCCCC-CCCCcccccCcCcccc---cccChhhcCCchhhhhccCHHHHHHHH
Confidence 356899999999999999999999999999997 2222222222333222 333444456666 67899999999999
Q ss_pred HHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHH------------HHHH-HhhhccCCCccccccccchhHH
Q 008146 242 AGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDA------------IEAL-RISYKKMNPFCVPFATTNMGSA 308 (576)
Q Consensus 242 aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~------------~~~l-~~~~~~~~~~~~~~~~~~~~a~ 308 (576)
++.+||+|||++.+ ..+..|+||++|++.++.....+. ...+ ....+.++|+.++..+.|..++
T Consensus 80 Aa~~Al~dAGl~~~---~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~ 156 (398)
T PRK06519 80 AAGLALDDAGIKGN---EELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSNLLAG 156 (398)
T ss_pred HHHHHHHHcCCCCC---CCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhhHHHH
Confidence 99999999999753 345679999999999887654432 1112 2234567899999999999999
Q ss_pred HHHHHhCCCCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCC-Cc
Q 008146 309 MLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRP-WD 387 (576)
Q Consensus 309 ~ia~~lgl~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rp-fd 387 (576)
++++.||++||+++|+++|+||+.||.+|+++|++|++|++||||+|..++|..+..|..++.++.. .++| ||
T Consensus 157 ~is~~~gl~Gp~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~~------~~~p~~d 230 (398)
T PRK06519 157 NISIVHKVTGSSRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKG------GWAPVWS 230 (398)
T ss_pred HHHHHhCCCCccccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCCC------CCCchhc
Confidence 9999999999999999999999999999999999999999999999998999989999999988742 3555 45
Q ss_pred c---CCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEE
Q 008146 388 I---NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYI 464 (576)
Q Consensus 388 ~---~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~v 464 (576)
. +++||++|||++++|||++++|++||++||++|.|++. |.. +. ...++.++|++||++||+ ++|||||
T Consensus 231 ~~~~~r~G~v~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~--d~~----~~-~~~~~~~am~~AL~~Agl-~~~IdyI 302 (398)
T PRK06519 231 RGGEDGGGFILGSGGAFLVLESREHAEARGARPYARISGVES--DRA----RR-APGDLEASLERLLKPAGG-LAAPTAV 302 (398)
T ss_pred cCccCCCCeeeeceEEEEEEeeHHHHHhCCCceEEEEEEEee--cCC----CC-ChHHHHHHHHHHHHHCCC-cccCCEE
Confidence 5 69999999999999999999999999999999999964 322 11 345789999999999999 8999999
Q ss_pred EecCCCCccCcHHHHHHHHHHHcCCCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCccccc
Q 008146 465 NAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLV 544 (576)
Q Consensus 465 e~Hgtgt~~gD~~E~~Al~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~ 544 (576)
++|||||+.+|..|..+|+++|+ .+|+++|+++||+++|+|+++++.++++|++|++||++|++ |.
T Consensus 303 ~ahgtgT~~~D~~E~~Ai~~~f~----~pvsS~Ks~~GH~l~AAGa~e~i~~~lal~~g~vpp~~n~~-~~--------- 368 (398)
T PRK06519 303 ISGATGAHPATAEEKAALEAALA----GPVRGIGTLFGHTMEAQFPLGLALAALSVSKGALFPPFDAS-GE--------- 368 (398)
T ss_pred EeCCCCCCCccHHHHHHHHHHcC----CCccccchhhccchHHHHHHHHHHHHHHHhcCccCCCCCCC-cc---------
Confidence 99999999999999999999996 57999999999999999999999999999999999999972 21
Q ss_pred CCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 545 GPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 545 ~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
.+...+++.++++++|++|.-.-.+++.
T Consensus 369 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (398)
T PRK06519 369 --KPMSGAAREAVVTTVGHWRGEGMALVEA 396 (398)
T ss_pred --cCccccccEEEEEeeccCCcceeEEEEe
Confidence 2344567899999999999877766653
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-62 Score=530.95 Aligned_cols=394 Identities=25% Similarity=0.405 Sum_probs=350.5
Q ss_pred CCCcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCC---Ccccc--ccccCCCCCCC-CChhhhhcCCHHH
Q 008146 163 KQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSF---PTKIA--AEIKSFSTDGW-VAPKLSKRMDKFM 236 (576)
Q Consensus 163 ~~~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~---~~~~~--g~v~~fd~~~~-i~~~~a~~mdp~~ 236 (576)
++++|||.||+..+|..+++++||.+|.+|.|-+++-++.+..++ |.+.+ ..+..||..+| ..++++..||||.
T Consensus 9 ~~edIvIsG~sgklPes~nv~eF~~nLl~g~DmVtdd~rrW~~G~ygLP~r~gKlKdL~kFDa~ff~vh~KQa~~MDPq~ 88 (2376)
T KOG1202|consen 9 KQEDIVISGMSGKLPESDNVKEFGDNLLAGVDMVTDDPRRWEAGLYGLPKRSGKLKDLNKFDAGFFGVHPKQANTMDPQL 88 (2376)
T ss_pred cCCcEEEeccCCCCCCcccHHHHhhhhhcccccccCCcccccccccCCchhhcchhhhhhhcccccCcCcccccccCHHH
Confidence 477899999999999999999999999999999988765333333 33322 23456999988 8999999999999
Q ss_pred HHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCC
Q 008146 237 LYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGW 316 (576)
Q Consensus 237 rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 316 (576)
||+|++.|||+-||||.|+ +++++++|||+|.+..+..... .......+.+..++....|.+.||++.|++
T Consensus 89 RlLLE~t~EAivDaGiNP~---~LRGs~tGv~vg~s~seTs~~~------~~dp~t~~Gy~mtgc~raMfaNRiSytFDf 159 (2376)
T KOG1202|consen 89 RLLLEATWEAIVDAGINPD---DLRGSRTGVFVGVSGSETSGAL------SQDPDTVNGYSMTGCVRAMFANRISYTFDF 159 (2376)
T ss_pred HHHHHHHHHHHHhCCCChh---hcCcccceeEEeecCccccccc------cCCCccccceeecccHHHHhhcceeEEEec
Confidence 9999999999999999998 8999999999998875544221 112233455666677788999999999999
Q ss_pred CCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceec
Q 008146 317 MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMG 396 (576)
Q Consensus 317 ~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~g 396 (576)
+||++.+|++|+|++.|+..|++.|+.|+||.+||+|++..+.|..-..|.++|+|+ |++.||.||...|||++.
T Consensus 160 qGPS~s~DtacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls-----~dGsCkaFDeagnGY~Rs 234 (2376)
T KOG1202|consen 160 QGPSFSVDTACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLS-----PDGSCKAFDEAGNGYCRS 234 (2376)
T ss_pred cCCchhhhhhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcC-----CCCcccchhccCCceeec
Confidence 999999999999999999999999999999999999999999999999999999999 899999999999999999
Q ss_pred CceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCC-CCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCc
Q 008146 397 EGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAY-HMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGD 475 (576)
Q Consensus 397 EGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~-~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD 475 (576)
||+++++|.+...|++ +||.|.....|.||. ....+-|+|..|.+.|++.|+++|++|+++-|||+|||||+.||
T Consensus 235 eg~~avllqrk~~ArR----vYAtilnartNTDGfKEqGvTfP~G~~Q~qLi~e~Yse~Gl~P~sv~YvEAHGtGTkVGD 310 (2376)
T KOG1202|consen 235 EGVVAVLLQRKSLARR----VYATILNARTNTDGFKEQGVTFPSGDMQEQLIRETYSEAGLNPESVVYVEAHGTGTKVGD 310 (2376)
T ss_pred CceEEEEEehhHHHHH----HHHHhhccccCCCchhhcCccCCCcHHHHHHHHHHHHhcCCCcccEEEEEeccCCCCCCC
Confidence 9999999999988865 799999999999998 45667789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCC--CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCC----cccccCCccc
Q 008146 476 IKEYQALIHCFGQN--RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD----TNVLVGPKKE 549 (576)
Q Consensus 476 ~~E~~Al~~~f~~~--~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~----~~~~~~~~~~ 549 (576)
+-|+++|.+.|... .++.|+|+|+|+||++-|||+..+.|.+++|++|.|||++|+..|||.+. ..+.+..++.
T Consensus 311 pQEaN~it~~fC~~Rt~pLLIGSvKSNMGHaEPASGv~alaKillsmE~glip~NLHy~tPNp~ip~L~dGrLkVVd~~l 390 (2376)
T KOG1202|consen 311 PQEANGITRFFCATRTTPLLIGSVKSNMGHAEPASGVCALAKILLSMEEGLIPPNLHYNTPNPEIPALVDGRLKVVDRPL 390 (2376)
T ss_pred hHHhhhHHHHHhhcCCCceEeeeccccCCCCCccchHHHHHHHHHHHHhCcCCCccccCCCCCCcchhccceeEEecCCC
Confidence 99999999999865 46889999999999999999999999999999999999999999999875 3455556677
Q ss_pred ccCccEEEEeccCCCcceeEEEEee
Q 008146 550 RLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 550 ~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
+|+--...+|||||||.|+|+||+.
T Consensus 391 p~~GGivGiNSFGFGGsN~HviLks 415 (2376)
T KOG1202|consen 391 PWRGGIVGINSFGFGGSNAHVILKS 415 (2376)
T ss_pred CccCceeeeeccccCCCceeEEecc
Confidence 7777888999999999999999985
|
|
| >cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-41 Score=351.92 Aligned_cols=322 Identities=34% Similarity=0.527 Sum_probs=274.4
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
+++|+++++++||++||++++ ....+..+||+|++.+.+.... ........+.|+.+.....+..+.+++..+
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~---~~~~~i~~ii~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 83 (332)
T cd00825 11 VSILGFEAAERAIADAGLSRE---YQKNPIVGVVVGTGGGSPRFQV----FGADAMRAVGPYVVTKAMFPGASGQIATPL 83 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCcc---ccCCCCEEEEEEeCCccHHHHh----hhhccccccCcchhhcccchHHHHHHHHHh
Confidence 678999999999999999853 3344667999998876553221 122334567788888888889999999999
Q ss_pred CCCCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcce
Q 008146 315 GWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFV 394 (576)
Q Consensus 315 gl~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v 394 (576)
|++||+++|+++|+|++.||++|.++|++|++|.+||+|+|.+..+.....+...+.+ .|+..++||+...+|++
T Consensus 84 gl~g~~~~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~ 158 (332)
T cd00825 84 GIHGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALS-----TPEKASRTFDAAADGFV 158 (332)
T ss_pred CCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhcccc-----CCCCCCCCCCCCCCCEE
Confidence 9999999999999999999999999999999999999999987666544333222222 36778999999999999
Q ss_pred ecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccC
Q 008146 395 MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAG 474 (576)
Q Consensus 395 ~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~g 474 (576)
+|||++++||++.+.|+++|.++|++|.+++..+++.+.....+....+.++++++|+++|++++||||++.|++|++..
T Consensus 159 ~gdGaaA~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~ 238 (332)
T cd00825 159 FGDGAGALVVEELEHALARGAHIYAEIVGTAATIDGAGMGAFAPSAEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIG 238 (332)
T ss_pred EEeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCC
Confidence 99999999999999999999999999999999999877665667788899999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHcCCCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCcc
Q 008146 475 DIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVK 554 (576)
Q Consensus 475 D~~E~~Al~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~ 554 (576)
|..|.+++...++.. ++++.+.|..+||+.+|++++++++++++++++.+||++|+.++++. .+.++. +......+
T Consensus 239 ~~~e~~~~~~~~~~~-~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~~~~~p~~~~~~~~~~~--~~~~~~-~~~~~~~~ 314 (332)
T cd00825 239 DVKELKLLRSEFGDK-SPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPSIHIEELDEA--GLNIVT-ETTPRELR 314 (332)
T ss_pred CHHHHHHHHHHhCCC-CceeECCCcccccchhHhHHHHHHHHHHHHhcCccCCCCCCCCCCcc--cCcccC-CCCCCCCC
Confidence 999999999988754 57899999999999999999999999999999999999999998873 222222 23444678
Q ss_pred EEEEeccCCCcceeEEEE
Q 008146 555 AALSNSFGFGGHNSSIIF 572 (576)
Q Consensus 555 ~alv~sfG~gG~na~vil 572 (576)
++++++||+||+|+++||
T Consensus 315 ~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 315 TALLNGFGLGGTNATLVL 332 (332)
T ss_pred EEEEeeecCCCeeEEEeC
Confidence 999999999999999986
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). |
| >PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-40 Score=344.13 Aligned_cols=316 Identities=19% Similarity=0.169 Sum_probs=247.7
Q ss_pred CCcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 008146 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 243 (576)
Q Consensus 164 ~~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa 243 (576)
+++|+|+|+|+++|.|.+.++.|.+|+.|.+.....+.++....+..... ..+-++.....++..+|+..++
T Consensus 2 ~~~v~I~~~g~vs~lG~~~~~~~aa~ragi~~~~~~~~~~~~~~~~i~~~--------~~~~~~~~~~~~r~~~La~~Al 73 (348)
T PRK06147 2 MRALAIVGSGMVTAVGLDAPSSCAAIRARLDNFQETRFIDPPGGEWLIGA--------PVPLPPPWRGPERLAEMAAPAI 73 (348)
T ss_pred CCceEEEecceeecCcCCHHHHHHHHHcccccccccccccCCCCCceEee--------cCcCCcccCchHHHHHHHHHHH
Confidence 45699999999999999999999999999877654443332101000000 0111222233456789999999
Q ss_pred HHHHHhCC-CChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCC--CCcc
Q 008146 244 KKALADGG-ITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGW--MGPN 320 (576)
Q Consensus 244 ~eAL~dAG-i~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~ 320 (576)
++||++++ +++ .+++++++....+ .+..+. ...+..+..++..+|+ ++|+
T Consensus 74 ~~aL~~a~~~~~--------~~i~lil~~~~~~---------------~~~~~~----~~~~~~~~~~~~~lG~~~~~~~ 126 (348)
T PRK06147 74 AEALEGLPALDA--------SEAPLLLCVAEEE---------------RPGRPP----DLEERLLRELEARLGLRLEPGS 126 (348)
T ss_pred HHHHHhcccccc--------cCCcEEEEeCchh---------------cCCCCc----chHHHHHHHHHHHhCCCCCCCc
Confidence 99999998 443 3466777754210 000111 1112235567777887 5789
Q ss_pred ccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceE
Q 008146 321 YSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 400 (576)
Q Consensus 321 ~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAa 400 (576)
++|.++|+|++.||..|+++|+.|++|.+||||+|.++.+..+..|...+.+.. +.+++||++|||++
T Consensus 127 ~~i~~~casg~~Al~~A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~------------~~~~~G~v~GEGA~ 194 (348)
T PRK06147 127 AVIARGRVSGAVALAQARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLT------------SQNSNGFIPGEAAA 194 (348)
T ss_pred ccccccchHHHHHHHHHHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCC------------CCCCCceeeeceEE
Confidence 999999999999999999999999999999999999888877777777665541 24689999999999
Q ss_pred EEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCC-CCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHH
Q 008146 401 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEP-HPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEY 479 (576)
Q Consensus 401 alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~-~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~ 479 (576)
++|||+.++|+++|++||+ .|++.+.++.+.... .+++.++.++|+++|+++|++++|||||++|+|||+.+|..|.
T Consensus 195 a~vLe~~~~A~~rga~i~a--~g~~~~~~~~~~~~~~p~~g~gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~ 272 (348)
T PRK06147 195 AVLLGRPAGGEAPGLPLLG--LGLGREPAPVGESEDLPLRGDGLTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAA 272 (348)
T ss_pred EEEEccHhhhhcCCCceEE--EEEeecCCCcccCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHH
Confidence 9999999999999999998 677777666544432 2478999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCC-CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCC
Q 008146 480 QALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPN 528 (576)
Q Consensus 480 ~Al~~~f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~ 528 (576)
.++.++|+.. ...+++++|+++||+++|+|+++++.++++|++|++|+.
T Consensus 273 ~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g~ 322 (348)
T PRK06147 273 LAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAASRKGYGPGP 322 (348)
T ss_pred HHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHHHcCcCCCC
Confidence 9999999864 357899999999999999999999999999999998654
|
|
| >PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-39 Score=324.38 Aligned_cols=235 Identities=41% Similarity=0.680 Sum_probs=186.1
Q ss_pred CCcEEEEecceecCCCCCHHHHHHHHHcCCCcceecc-CCCCCCC---CccccccccC----------CCCCCC-CChhh
Q 008146 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIE-TFDCTSF---PTKIAAEIKS----------FSTDGW-VAPKL 228 (576)
Q Consensus 164 ~~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~-~~~~~~~---~~~~~g~v~~----------fd~~~~-i~~~~ 228 (576)
|++|||||||+++|+|.+.++||++|.+|++++.+++ +|+...+ +....++++. ||...+ +++++
T Consensus 1 m~~V~ItG~g~~~p~g~~~~~~w~~L~~g~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (254)
T PF00109_consen 1 MRRVVITGMGCVTPGGDGLEEFWEALLSGRSGIRPIPERWDPSDYYDPPSRVAGEIDDKKGGFIDDFDFDAYFFGIPPRE 80 (254)
T ss_dssp -S-EEEEEEEEEBTTBSSHHHHHHHHHTT---EEESCSSSCHTTSTTSSCSEEECBSSSEESSSTTTCGGGTSTCHHHHH
T ss_pred CCEEEEEEEEEECcCCCCHHHHHhhhccCceeeeeeccccccccccccCCcccccccccccceeeecccccccccccchh
Confidence 5789999999999999999999999999999999988 6776666 4555666554 444444 66777
Q ss_pred hhcCCHHHHHHHHHHHHHHHhCCCChhhhhcccCC-eeEEEEcccCCchhHHHHHHHHHH-hh--hccCCCccccccccc
Q 008146 229 SKRMDKFMLYLLTAGKKALADGGITEDVMNELDKS-KCGVLIGSGLGGMKVFYDAIEALR-IS--YKKMNPFCVPFATTN 304 (576)
Q Consensus 229 a~~mdp~~rl~l~aa~eAL~dAGi~~~~i~~~~~~-r~gV~vG~~~g~~~~~~~~~~~l~-~~--~~~~~~~~~~~~~~~ 304 (576)
.++||++++|++.++++||+|||+.++ .++.. |+||++|++.+++ +.+..+. .. .....|..++..+.|
T Consensus 81 ~~~~~~~~~~~l~aa~~Al~dAg~~~~---~~~~~~r~gv~~G~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~ 153 (254)
T PF00109_consen 81 ARRMDRQSRLALAAAREALEDAGLDPD---DLDGERRVGVFVGSSSGDY----EFYRALDEDGETPRDVSPWFVPNTLPN 153 (254)
T ss_dssp HHTS-HHHHHHHHHHHHHHHHHTSTGG---GHTGGGTEEEEEEESSSHH----HHHHHHHHHTTCGGGSHTTHHHHHSTT
T ss_pred hhhhhhhhhHHHHHhhhhccccccccc---ccccccceeeccccccccc----cccccccccccccccccccccCccccc
Confidence 889999999999999999999999886 34444 5999999998844 2222222 22 345555444556899
Q ss_pred hhHHHHHHHhCCCCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCC
Q 008146 305 MGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASR 384 (576)
Q Consensus 305 ~~a~~ia~~lgl~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~r 384 (576)
.++++|++.||++||+++|+++|+||+.||+.|+++|++|++|+|||||+|..+++..+..|.++++++ +++.|+
T Consensus 154 ~~a~~ia~~~gl~G~~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s-----~~~~~~ 228 (254)
T PF00109_consen 154 SAAGRIAILFGLRGPSYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALS-----ADGPCR 228 (254)
T ss_dssp HHHHHHHHHHTB-SSEEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB------TTSGGG
T ss_pred ccccchhhhcCCCCccccccccccccccccchhcccccccccccccccccccccccccccccccccccc-----cccccc
Confidence 999999999999999999999999999999999999999999999999999889999999999999887 336799
Q ss_pred CCccCCCcceecCceEEEEEcchHHH
Q 008146 385 PWDINRDGFVMGEGAGVLLLEELEHA 410 (576)
Q Consensus 385 pfd~~~~G~v~gEGAaalvL~~~~~A 410 (576)
|||.+++|+++|||+++||||++++|
T Consensus 229 pf~~~~~G~v~gEGa~~~vLe~~~~A 254 (254)
T PF00109_consen 229 PFDPFADGFVLGEGAGALVLERLEHA 254 (254)
T ss_dssp STBTTB-SB-BB-EEEEEEEEEHHHH
T ss_pred ccCCCCCCEEEECceEEEEEEEhhhC
Confidence 99999999999999999999999886
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B .... |
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.3e-30 Score=256.51 Aligned_cols=247 Identities=33% Similarity=0.512 Sum_probs=215.7
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
...|+.+++++||+++|+++++++ +|++|+..+++ ..+..+.+++..+
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~-------~li~~~~~~~~-------------------------~~~~~a~~i~~~l 54 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIV-------GVIVGTTGGSG-------------------------EFSGAAGQLAYHL 54 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCce-------EEEEEECCCCc-------------------------cccHHHHHHHHHh
Confidence 678999999999999999876544 89999865322 1355678999999
Q ss_pred CC-CCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcc
Q 008146 315 GW-MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGF 393 (576)
Q Consensus 315 gl-~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~ 393 (576)
|+ ++|+++|+++|+|++.||+.|+++|++|++|.+||+|+|. +
T Consensus 55 g~~~~~~~~i~~~C~s~~~al~~A~~~i~~g~~~~~lv~~~e~------------------------------------~ 98 (254)
T cd00327 55 GISGGPAYSVNQACATGLTALALAVQQVQNGKADIVLAGGSEE------------------------------------F 98 (254)
T ss_pred CCCCCCcceeccHhHHHHHHHHHHHHHHHCCCCCEEEEEecce------------------------------------e
Confidence 99 8999999999999999999999999999999999999996 5
Q ss_pred eecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcc
Q 008146 394 VMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPA 473 (576)
Q Consensus 394 v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~ 473 (576)
++|||++++||++.+.+.+++.+++++|.++....++.+.. +.+....+.++++++|+++|++++|||++++|++++..
T Consensus 99 ~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~ 177 (254)
T cd00327 99 VFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMV-PAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPI 177 (254)
T ss_pred eecceEEEEEECcHHHHHHCCCceEEEEEEEEEcCCCCCCC-CCCChHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCcc
Confidence 68999999999999999999999999999998887765432 34567788999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHHcCCCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCc
Q 008146 474 GDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEV 553 (576)
Q Consensus 474 gD~~E~~Al~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~ 553 (576)
.|..|.+.....++.. .+++.+.+..+||+.+|+|.+.+.+++++++.+.+||. +.+.
T Consensus 178 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~---------------------~~~~ 235 (254)
T cd00327 178 GDAVELALGLDPDGVR-SPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPT---------------------PREP 235 (254)
T ss_pred ccHHHHHHHHHHhCCC-CCceeccccccccchHHHHHHHHHHHHHHHhCCCcCCC---------------------CCCc
Confidence 9999988776666543 37889999999999999999999999999999999881 1134
Q ss_pred cEEEEeccCCCcceeEEEE
Q 008146 554 KAALSNSFGFGGHNSSIIF 572 (576)
Q Consensus 554 ~~alv~sfG~gG~na~vil 572 (576)
+.+++++||+||+++++||
T Consensus 236 ~~~l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 236 RTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred CEEEEeeEcCCCcceEEEC
Confidence 6789999999999999986
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >PRK05656 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-25 Score=238.42 Aligned_cols=269 Identities=20% Similarity=0.280 Sum_probs=204.4
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
..|+.+++++||+|+|+++++|| .|++|+.... .. ....+..++..+|
T Consensus 27 ~~La~~A~~~AL~~agl~~~dID-------~vi~g~~~~~------------------------~~-~~~~a~~va~~lG 74 (393)
T PRK05656 27 VELGAAVIRRLLEQTGLDPAQVD-------EVILGQVLTA------------------------GA-GQNPARQAAIKAG 74 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEEecCC------------------------CC-CCcHHHHHHHHcC
Confidence 56899999999999999998776 7888875311 01 1124567889999
Q ss_pred CC--CccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhh----------------h--------------
Q 008146 316 WM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG----------------L-------------- 363 (576)
Q Consensus 316 l~--Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~----------------~-------------- 363 (576)
+. -|+++|+++|+|++.||+.|+++|++|.+|++||+|+|.+..... +
T Consensus 75 l~~~~p~~~V~~~Casg~~ai~~A~~~I~sG~~d~vLv~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (393)
T PRK05656 75 LPHSVPAMTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAFND 154 (393)
T ss_pred CCCCcceEEecccchhHHHHHHHHHHHHHcCCCCEEEEEEEhhhccCccccccccccccccchhhhhhhccccccccccC
Confidence 96 499999999999999999999999999999999999997653110 0
Q ss_pred --HHHHHhhhhhccCC-------------------CCCCCCC----CCcc------------------------------
Q 008146 364 --GGFVACRALSQRNN-------------------DPTKASR----PWDI------------------------------ 388 (576)
Q Consensus 364 --~~~~~~~~ls~~~~-------------------~p~~~~r----pfd~------------------------------ 388 (576)
.++...+.+...+. .|.+..+ |+..
T Consensus 155 ~~~a~~a~~~~~~~gitre~~d~~Av~sh~~a~~a~~~a~~~~ei~pv~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p 234 (393)
T PRK05656 155 YHMGITAENLVEKYGISREAQDAFAAASQQKAVAAIEAGRFDDEITPILIPQRKGEPLAFATDEQPRAGTTAESLAKLKP 234 (393)
T ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEEeccCCCCceEeccCCCCCCCCCHHHHhcCCC
Confidence 00000000000000 0111110 1100
Q ss_pred --CCCcce-------ecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 008146 389 --NRDGFV-------MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRE 459 (576)
Q Consensus 389 --~~~G~v-------~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~ 459 (576)
..+|.+ ++|||+++||++++.|+++|.+|+++|.|++... ..+.+.+.+...+++++|+++|++++
T Consensus 235 ~~~~~g~lt~~~~s~~~DGAaa~vl~s~~~A~~~g~~~~a~i~g~~~~~-----~~~~~~~~~~~~a~~~al~~agl~~~ 309 (393)
T PRK05656 235 AFKKDGSVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAG-----VDPAIMGIGPVSATRRCLDKAGWSLA 309 (393)
T ss_pred CcCCCCCEEccccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEec-----CCCcccchhHHHHHHHHHHHcCCCHH
Confidence 023445 8999999999999999999999999999999874 23455566778999999999999999
Q ss_pred CccEEEecCCCCccCcHHHHHHHHHHHcCC-CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCC
Q 008146 460 DVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVV 538 (576)
Q Consensus 460 dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~ 538 (576)
||||||+|++ +..|..++.+.|+.. .++++++.|..+||+.||+|+..++.++++|+.
T Consensus 310 dId~~e~~d~-----f~~~~~~~~e~lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~l~~~l~~---------------- 368 (393)
T PRK05656 310 ELDLIEANEA-----FAAQSLAVGKELGWDAAKVNVNGGAIALGHPIGASGCRVLVTLLHEMIR---------------- 368 (393)
T ss_pred HCCEEEecCc-----cHHHHHHHHHHhCCCCccCCcCCCHHHhCccHHHHHHHHHHHHHHHHHH----------------
Confidence 9999999986 447888888888853 468899999999999999999999999998873
Q ss_pred CcccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 539 DTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 539 ~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
...|+++.+...-||.-..+|||.
T Consensus 369 ------------~~~~~gl~~~c~~gG~g~a~~~e~ 392 (393)
T PRK05656 369 ------------RDAKKGLATLCIGGGQGVALAIER 392 (393)
T ss_pred ------------cCCCEEEEEEcccCcceEEEEEec
Confidence 134678888889999999999985
|
|
| >PRK06064 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.7e-24 Score=229.12 Aligned_cols=289 Identities=22% Similarity=0.306 Sum_probs=200.8
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
...|+.+++++||+|+|+++++|+ +|++|+..++... .....+..++..+
T Consensus 22 ~~eLa~~a~~~Al~dagl~~~~Id-------~vi~g~~~~~~~~-----------------------~~~~~a~~va~~l 71 (389)
T PRK06064 22 LRDLAVEAGLEALEDAGIDGKDID-------AMYVGNMSAGLFV-----------------------SQEHIAALIADYA 71 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccccccc-----------------------ccccHHHHHHHHc
Confidence 367899999999999999998666 6888865422110 0112467788999
Q ss_pred CCC-CccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchh--------------------h-----hHHHHH
Q 008146 315 GWM-GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI--------------------G-----LGGFVA 368 (576)
Q Consensus 315 gl~-Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~--------------------~-----~~~~~~ 368 (576)
|+. +|.++|+++|+|++.||..|+++|++|++|++||+|+|.+.... . ..++..
T Consensus 72 Gl~~~~~~~v~~aCasg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a 151 (389)
T PRK06064 72 GLAPIPATRVEAACASGGAALRQAYLAVASGEADVVLAAGVEKMTDVPTPDATEAIARAGDYEWEEFFGATFPGLYALIA 151 (389)
T ss_pred CCCCCCeeEEeCCcHHHHHHHHHHHHHHHCCCCCEEEEEEEEecccCcchhhhhhhhcccccccccccCCchHHHHHHHH
Confidence 997 69999999999999999999999999999999999998643210 0 001101
Q ss_pred hhhhhccC------------------CCCCCC----------------CCCCccCCCcceecCceEEEEEcchHHHHhcC
Q 008146 369 CRALSQRN------------------NDPTKA----------------SRPWDINRDGFVMGEGAGVLLLEELEHAKKRG 414 (576)
Q Consensus 369 ~~~ls~~~------------------~~p~~~----------------~rpfd~~~~G~v~gEGAaalvL~~~~~A~~~g 414 (576)
...+...+ .+|... +.|+. ..|...++||++++||++++.|++++
T Consensus 152 ~~~~~~yG~s~e~~a~~a~~~~~~A~~np~a~~~~~~t~~~~~~s~~i~~Pl~-~~d~~~~~dGAaa~vL~s~~~A~~~~ 230 (389)
T PRK06064 152 RRYMHKYGTTEEDLALVAVKNHYNGSKNPYAQFQKEITVEQVLNSPPVADPLK-LLDCSPITDGAAAVILASEEKAKEYT 230 (389)
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHhhCcHhhhCCCCCHHHHhcCCcccCCCc-hhhcCCCCCcceEEEEecHHHHHHhc
Confidence 11111100 011110 01211 23556789999999999999999987
Q ss_pred CeeeEEEEEEEEecCCCCCCCC-C-CChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHH-------
Q 008146 415 AKIYAEFRGGSFTSDAYHMTEP-H-PDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHC------- 485 (576)
Q Consensus 415 ~~i~a~I~g~~~~~dg~~~~~~-~-p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~------- 485 (576)
.++ ++|+|++..++..+.... . +...+...+++++|+++|++++|||++|+|+++|. .+.++++.+.-+
T Consensus 231 ~~~-v~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~aGi~~~did~~e~~d~ft~-~~~~~~e~lgl~~~G~~~~ 308 (389)
T PRK06064 231 DTP-VWIKASGQASDTIALHDRKDFTTLDAAVVAAEKAYKMAGIEPKDIDVAEVHDCFTI-AEILAYEDLGFAKKGEGGK 308 (389)
T ss_pred CCC-eEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCCCcH-HHHHHHHHcCCCCCCchHH
Confidence 655 589999998887754332 1 23556778999999999999999999999999996 355555555311
Q ss_pred -HcC-----CCCccccccccc--ccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEE
Q 008146 486 -FGQ-----NRGLRVNSTKSM--IGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAAL 557 (576)
Q Consensus 486 -f~~-----~~~~~v~s~K~~--iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~al 557 (576)
+.. ..++|++..++. .||+.+|+|+.+++++++||+.+-- . ...+-...+.++
T Consensus 309 ~~~~g~~~~~g~~pvN~~GG~l~~Ghp~~a~G~~~~~e~~~qL~g~a~-------------~------g~rqv~~a~~~l 369 (389)
T PRK06064 309 LAREGQTYIGGDIPVNPSGGLKAKGHPVGATGVSQAVEIVWQLRGEAE-------------K------GRQQVIGAGYGL 369 (389)
T ss_pred HHHCCCccCCCCeeecCCCCcccCCCCcchhHHHHHHHHHHHHhCCCC-------------C------CCccCCCccEEE
Confidence 100 124677777776 6999999999999999999997310 0 011112457888
Q ss_pred EeccCC-CcceeEEEEeeC
Q 008146 558 SNSFGF-GGHNSSIIFSPY 575 (576)
Q Consensus 558 v~sfG~-gG~na~vil~~~ 575 (576)
+.++|. +.+++.+||++-
T Consensus 370 ~~~~g~~~~~~~~~vl~~~ 388 (389)
T PRK06064 370 THNVGGTGHTAVVHILSRK 388 (389)
T ss_pred EecCCCccceEEEEEEEec
Confidence 888874 446667777753
|
|
| >cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-24 Score=229.14 Aligned_cols=270 Identities=22% Similarity=0.311 Sum_probs=200.0
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
...|+.+++++||+|+|+++++|| +|++|+....+ .....+..++..+
T Consensus 22 ~~~La~~A~~~AL~dAgl~~~dID-------~vi~~~~~~~~-------------------------~~~~~a~~v~~~l 69 (386)
T cd00751 22 ADDLGAAVIKALLERAGLDPEEVD-------DVIMGNVLQAG-------------------------EGQNPARQAALLA 69 (386)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCC-------EEEEEeccCCC-------------------------CCChHHHHHHHHc
Confidence 377999999999999999998776 68887643211 0122355688889
Q ss_pred CCCC--ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchh-----------------------hh------
Q 008146 315 GWMG--PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI-----------------------GL------ 363 (576)
Q Consensus 315 gl~G--p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~-----------------------~~------ 363 (576)
|+.. |.++|+++|+|++.+|..|+++|++|++|.+||+|+|.+.... .+
T Consensus 70 Gl~~~~~~~~v~~~c~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (386)
T cd00751 70 GLPESVPATTVNRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFTG 149 (386)
T ss_pred CCCCCCchhhhccccHHHHHHHHHHHHHHHCCCCCeEEEeeeeccccCcccccccccccccCccccccccccccccccCC
Confidence 9974 8999999999999999999999999999999999998752110 00
Q ss_pred --HHHHHhhhhhcc--------------------CC-----------------------CCCCCCC------------CC
Q 008146 364 --GGFVACRALSQR--------------------NN-----------------------DPTKASR------------PW 386 (576)
Q Consensus 364 --~~~~~~~~ls~~--------------------~~-----------------------~p~~~~r------------pf 386 (576)
.++.....+.+. +. +|+...| |.
T Consensus 150 ~~~a~~a~~~~~~yg~tre~la~vav~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~a~~r~~~t~e~v~~s~~i 229 (386)
T cd00751 150 LSMGITAENVAEKYGISREEQDEFALRSHQRAAAAQEAGRFKDEIVPVEVPGRKGPVVVDRDEGPRPDTTLEKLAKLKPA 229 (386)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCCC
Confidence 000000100000 00 0111111 11
Q ss_pred -c-----cCCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 008146 387 -D-----INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 460 (576)
Q Consensus 387 -d-----~~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~d 460 (576)
+ ...|...++||++++||++++.|++++.+++++|+|++.+++... +...+...+++++|+++|++|+|
T Consensus 230 ~~p~g~l~~~d~~~~~dGaaavvl~s~~~a~~~~~~~~~~I~g~~~~~~~~~-----~~~~~~~~a~~~a~~~Agi~~~d 304 (386)
T cd00751 230 FKKDGTVTAGNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDPA-----IMGIGPVPAIPKALKRAGLTLDD 304 (386)
T ss_pred cCCCCcEeCCcCCCCCcceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCc-----ccchhHHHHHHHHHHHcCCCHHH
Confidence 1 123455679999999999999999999999999999999876432 23446679999999999999999
Q ss_pred ccEEEecCCCCccCcHHHHHHHHHHHcCC-CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCC
Q 008146 461 VNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD 539 (576)
Q Consensus 461 Id~ve~Hgtgt~~gD~~E~~Al~~~f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~ 539 (576)
||++|+|++++. .|. ...+.||-. .++++.+.+..+||+.+|+|+.+++++++||+..
T Consensus 305 id~~e~~d~f~~----~~~-~~~e~lg~~~~pvn~~GG~l~~Gh~~gasG~~~~~e~~~qL~g~---------------- 363 (386)
T cd00751 305 IDLIEINEAFAA----QAL-ACLKELGLDPEKVNVNGGAIALGHPLGASGARIVVTLLHELKRR---------------- 363 (386)
T ss_pred cCEEEeechhHH----HHH-HHHHHhCCChhhcCCCcchHhhCccHHHHHHHHHHHHHHHHHhc----------------
Confidence 999999988773 233 233455533 2577888888999999999999999999999862
Q ss_pred cccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 540 TNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 540 ~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
..++++++.-+-||..+.+|||.
T Consensus 364 ------------~~~~gl~~~~~~gg~g~~~~ie~ 386 (386)
T cd00751 364 ------------GGRYGLATMCIGGGQGAAMVIER 386 (386)
T ss_pred ------------CCCEEEEEEcccccceEEEEEEC
Confidence 24678999999999999999984
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK06633 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.6e-24 Score=225.74 Aligned_cols=269 Identities=20% Similarity=0.277 Sum_probs=192.8
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
..|+.++.+++|+|+|+++++|| .|++|+..... .....+..++...|
T Consensus 28 ~~L~~~a~~~al~~agi~~~~Id-------~vv~G~~~~~~-------------------------~g~~~~r~~~~~~G 75 (392)
T PRK06633 28 PMLAAHLIKDILQNSKIDPALVN-------EVILGQVITGG-------------------------SGQNPARQTLIHAG 75 (392)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC-------EEEEEecCccc-------------------------cccHHHHHHHHHCC
Confidence 45889999999999999998777 69999764211 11234566778899
Q ss_pred CC--CccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccc-hhh--------hHH--------HH---------
Q 008146 316 WM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PIG--------LGG--------FV--------- 367 (576)
Q Consensus 316 l~--Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~-p~~--------~~~--------~~--------- 367 (576)
+. -|.++|+++|+||+.|+..|+++|++|++|++||||+|.+.. |.. +.. +.
T Consensus 76 l~~~~p~~~V~~~CaSG~~Ai~~A~~~I~sG~~dvvla~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (392)
T PRK06633 76 IPKEVPGYTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLGMHGSYIRAGAKFGDIKMVDLMQYDGLTDVFSGV 155 (392)
T ss_pred CCCCccchhhcchhHHHHHHHHHHHHHHHcCCCCEEEEcccccCCCCCcchhcccccccCcchhhhhhcccccccccCcc
Confidence 96 399999999999999999999999999999999999998763 210 000 00
Q ss_pred Hhhhhhc-----cCC------------------CCCCC-------------------------C------------C-CC
Q 008146 368 ACRALSQ-----RNN------------------DPTKA-------------------------S------------R-PW 386 (576)
Q Consensus 368 ~~~~ls~-----~~~------------------~p~~~-------------------------~------------r-pf 386 (576)
.++...+ .+. .|... . + .|
T Consensus 156 ~~a~~a~~~~~~~gitre~~d~~Avksh~~a~~np~A~~~~~ei~p~~v~~~~~~~~~~~d~~~rp~~~~e~l~~l~p~~ 235 (392)
T PRK06633 156 FMGITAENISKQFNISRQEQDEFALSSHKKAAKAQLAGIFKDEILPIEVTIKKTTSLFDHDETVRPDTSLEILSKLRPAF 235 (392)
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCcCceeeEEeccCCCceeeccCCCCCCCCCHHHHccCCCcc
Confidence 0000000 000 00000 0 1 11
Q ss_pred cc-----CCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCc
Q 008146 387 DI-----NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDV 461 (576)
Q Consensus 387 d~-----~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dI 461 (576)
+. ..|...++|||+++||++++.|+++|.+++++|+|++...+. +...+.+...+++++|+++|++|+||
T Consensus 236 ~~~g~lt~~n~s~~sDGAaalvl~see~A~~~g~~p~a~I~g~~~~~~~-----~~~~~~~~~~a~~~Al~~AGl~p~DI 310 (392)
T PRK06633 236 DKNGVVTAGNASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGVD-----PSIMGTAPVPASQKALSKAGWSVNDL 310 (392)
T ss_pred CCCCCEechhcCCccCceEEEEEecHHHHHHCCCCeeEEEEEEEEecCC-----cchhchHHHHHHHHHHHHcCCCHHHc
Confidence 11 012245799999999999999999999999999999987542 22233566889999999999999999
Q ss_pred cEEEecCCCCccCcHHHHHHHHHHHcC-CCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCc
Q 008146 462 NYINAHATSTPAGDIKEYQALIHCFGQ-NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDT 540 (576)
Q Consensus 462 d~ve~Hgtgt~~gD~~E~~Al~~~f~~-~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~ 540 (576)
||+|.|...+. .|+.. .+.++- ..++++++.|..+||++||+|+++++.++++|+..
T Consensus 311 D~~ei~dafa~----~~l~~-~~~l~~~~~~vN~sGg~~a~GHplgAtG~~~~~~~~~qL~~~----------------- 368 (392)
T PRK06633 311 EVIEVNEAFAA----QSIYV-NREMKWDMEKVNINGGAIAIGHPIGASGGRVLITLIHGLRRA----------------- 368 (392)
T ss_pred CeeehhhHHHH----HHHHH-HhhhCCCccccCCCCchHhhCCcHHHHHHHHHHHHHHHHHhc-----------------
Confidence 99998744432 11111 122231 23688999999999999999999999999999861
Q ss_pred ccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 541 NVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 541 ~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
..++++.+..+-||.-..+|||.
T Consensus 369 -----------~~~~g~~~~c~~gG~g~a~~~e~ 391 (392)
T PRK06633 369 -----------KAKKGLVTLCIGGGMGMAMCVEA 391 (392)
T ss_pred -----------CCCeEEEEEecccChhheEEEEe
Confidence 13457777778888888899885
|
|
| >TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-23 Score=223.63 Aligned_cols=269 Identities=22% Similarity=0.274 Sum_probs=196.6
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
...|+.+++++||+|+|+++++|| ++++|+..... .....+..++..+
T Consensus 21 ~~~La~~A~~~Al~dAgl~~~dID-------~vv~g~~~~~~-------------------------~~~~~a~~va~~l 68 (386)
T TIGR01930 21 AEDLGAAVIKELLERNPLDPELID-------DVIFGNVLQAG-------------------------EQQNIARQAALLA 68 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCCC-------------------------CCChHHHHHHHHc
Confidence 477999999999999999998776 67887643110 0012355678888
Q ss_pred CCC--CccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchh-h----------h------------------
Q 008146 315 GWM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI-G----------L------------------ 363 (576)
Q Consensus 315 gl~--Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~-~----------~------------------ 363 (576)
|+. .|.+.|+++|+|++.+|..|+++|++|.+|.+||+|+|.+.... . +
T Consensus 69 Gl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 148 (386)
T TIGR01930 69 GLPESVPAYTVNRQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPYSLPRSRREGVDPGRFELEDQILKDGLTDPL 148 (386)
T ss_pred CCCCCceeeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCccccccccccccccCccccchhhcCccccccc
Confidence 985 48999999999999999999999999999999999988743211 0 0
Q ss_pred ----HHHHHhhhhhccCC--------------------C---------CC--------------C-CCCCCc--------
Q 008146 364 ----GGFVACRALSQRNN--------------------D---------PT--------------K-ASRPWD-------- 387 (576)
Q Consensus 364 ----~~~~~~~~ls~~~~--------------------~---------p~--------------~-~~rpfd-------- 387 (576)
.++...+.+.+.+. + |. . ..+|..
T Consensus 149 ~~~~~a~~a~~y~~~yG~t~e~la~vav~~~~~A~~n~~~g~~~~~i~P~a~~~~~~~~~~~~da~~r~~~t~e~v~~s~ 228 (386)
T TIGR01930 149 NGLSMGLTAENLAKKYGISREEQDEYALRSHQRAAKAWEEGLFKDEIVPVSVKGRKGPVTVSTDEGIRPNTTLEKLAKLK 228 (386)
T ss_pred cCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCC
Confidence 00000001000000 0 21 0 011111
Q ss_pred ---------cCCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCC
Q 008146 388 ---------INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSR 458 (576)
Q Consensus 388 ---------~~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~ 458 (576)
...|...++||++++||++++.|++++.+++++|.|++...+ .+.+...+..++++++|+++|++|
T Consensus 229 ~i~~P~~~l~~~d~~~~~dGAaa~vl~s~~~A~~~~~~~~~~i~g~g~~~~-----~~~~~~~~~~~a~~~a~~~Agi~~ 303 (386)
T TIGR01930 229 PAFDPNGTVTAGNSSPLNDGAAALLLMSEERAKELGLTPLARIVSFAVAGV-----DPEIMGLGPVPAIPKALKKAGLSI 303 (386)
T ss_pred CCcCCCCeeeCCccCCCCcceeEEEEecHHHHHHCCCCccEEEEEEEEecC-----CCccccccHHHHHHHHHHHcCCCH
Confidence 113444569999999999999999999999999999998753 223334456799999999999999
Q ss_pred CCccEEEecCCCCccCcHHHHHHHHHHHcC-CCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCC
Q 008146 459 EDVNYINAHATSTPAGDIKEYQALIHCFGQ-NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAV 537 (576)
Q Consensus 459 ~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~-~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~ 537 (576)
+|||++|+|++.+. +.....+.||- ..++++.+.+..+||+.+|+|+.+++.+++||+..
T Consensus 304 ~did~~e~~d~fa~-----~~~~~~e~lG~~~~pvn~~GG~l~~Ghp~gasG~~~~~e~~~qL~g~-------------- 364 (386)
T TIGR01930 304 SDIDLFEINEAFAA-----QVLACIKELGLDLEKVNVNGGAIALGHPLGASGARIVTTLLHELKRR-------------- 364 (386)
T ss_pred HHCCeeehcchhHH-----HHHHHHHHhCCChhhcCCCCChHhhCCcHHHHHHHHHHHHHHHHHhc--------------
Confidence 99999999998873 22333345553 23577888888999999999999999999999862
Q ss_pred CCcccccCCcccccCccEEEEeccCCCcceeEEEEe
Q 008146 538 VDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573 (576)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~ 573 (576)
..++++++..+.||.-..+|||
T Consensus 365 --------------~~~~gl~~~~~~gG~g~~~~~e 386 (386)
T TIGR01930 365 --------------GGRYGLATICIGGGQGIAVILE 386 (386)
T ss_pred --------------CCCEEEEEEeccCCceEEEEeC
Confidence 2467888888999999999886
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt |
| >PRK09051 beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.9e-23 Score=221.90 Aligned_cols=270 Identities=22% Similarity=0.304 Sum_probs=198.7
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
..|+.+++++||+|+|+++++|| .|++|+...... .....+..++..+|
T Consensus 28 ~eL~~~A~~~AL~~agi~~~dID-------~vi~g~~~~~~~------------------------~~~~~a~~~~~~~G 76 (394)
T PRK09051 28 TDLGATVVREALARAGVDPDQVG-------HVVFGHVIPTEP------------------------RDMYLSRVAAINAG 76 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC-------EEEEeeeccccC------------------------CCccHHHHHHHHcC
Confidence 56899999999999999998777 688887642110 01123445566678
Q ss_pred CC--CccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhh----------------hH----HHHH-----
Q 008146 316 WM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG----------------LG----GFVA----- 368 (576)
Q Consensus 316 l~--Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~----------------~~----~~~~----- 368 (576)
+. .|+++|+++|+||+.|++.|+++|++|.+|++||+|+|.+..... .. .+..
T Consensus 77 l~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLvvG~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (394)
T PRK09051 77 VPQETPAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAESMSRAPYLLPAARWGARMGDAKLVDMMVGALHDPFGTI 156 (394)
T ss_pred CCCCCceEEecccchHHHHHHHHHHHHHHcCCCCEEEEEeehhcccCcccccccccccccCCchhhhhhcccccccccCC
Confidence 84 599999999999999999999999999999999999998653210 00 0000
Q ss_pred -hhhhh-----cc--------------------C-----------------------CCCCCCCC------------CCc
Q 008146 369 -CRALS-----QR--------------------N-----------------------NDPTKASR------------PWD 387 (576)
Q Consensus 369 -~~~ls-----~~--------------------~-----------------------~~p~~~~r------------pfd 387 (576)
++... +. + .+|+...| |+.
T Consensus 157 ~~~~~a~~~~~~ygitre~~d~~avksh~~A~~a~~~g~~~~ei~p~~~~~~~~~~~~~~da~~r~~~t~e~v~~~~~v~ 236 (394)
T PRK09051 157 HMGVTAENVAAKYGISREAQDALALESHRRAAAAIAAGYFKDQIVPVEIKTRKGEVVFDTDEHVRADTTLEDLAKLKPVF 236 (394)
T ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeecCCCCCeEECCCCCCCCCCCHHHHcCCCCcc
Confidence 00000 00 0 01333332 322
Q ss_pred cC-------CCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 008146 388 IN-------RDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 460 (576)
Q Consensus 388 ~~-------~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~d 460 (576)
.. .|...++||++++||++++.|+++|.+++++|+|++..... +.....+...+++++|+++|++++|
T Consensus 237 ~~~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~g~~~~~~I~g~~~~~~~-----~~~~~~~~~~a~~~al~~agi~~~d 311 (394)
T PRK09051 237 KKENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHAGVD-----PEYMGIGPVPATQKALERAGLTVAD 311 (394)
T ss_pred cCCCccEeCCcCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEeccC-----CCcccccHHHHHHHHHHHcCCCHHH
Confidence 11 12334689999999999999999999999999999987542 2333456689999999999999999
Q ss_pred ccEEEecCCCCccCcHHHHHHHHHHHcCC-CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCC
Q 008146 461 VNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD 539 (576)
Q Consensus 461 Id~ve~Hgtgt~~gD~~E~~Al~~~f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~ 539 (576)
||+||+|+..+ ++..+..+.||-. .++++++.+..+||+.||+|+..++.++.+|+..
T Consensus 312 id~~ei~d~f~-----~~~~~~~e~lg~~~~~vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L~~~---------------- 370 (394)
T PRK09051 312 LDVIEANEAFA-----AQACAVTRELGLDPAKVNPNGSGISLGHPVGATGAIITVKALYELQRI---------------- 370 (394)
T ss_pred cCEEEecCccH-----HHHHHHHHHhCCCccccCCCccHHHhcchHHHHHHHHHHHHHHHHHhc----------------
Confidence 99999998644 5666667778743 3566677777789999999999999999999851
Q ss_pred cccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 540 TNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 540 ~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
..++++++...-||.-..+|||.
T Consensus 371 ------------~~~~g~~~~c~~gG~g~a~~~e~ 393 (394)
T PRK09051 371 ------------GGRYALVTMCIGGGQGIAAIFER 393 (394)
T ss_pred ------------CCCEEEEEEccccChhhEEEEEe
Confidence 23567778888899999999986
|
|
| >PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-25 Score=198.71 Aligned_cols=115 Identities=39% Similarity=0.608 Sum_probs=98.6
Q ss_pred eEEEEEEEEecCC-CCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCC---CCcc
Q 008146 418 YAEFRGGSFTSDA-YHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN---RGLR 493 (576)
Q Consensus 418 ~a~I~g~~~~~dg-~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~---~~~~ 493 (576)
|++|+|+++++|+ .+...+.|++.++.++|+++|+++|++|+||||||+||+||+.+|..|.++|.++|+.. .+++
T Consensus 1 ya~i~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~ 80 (119)
T PF02801_consen 1 YAVIRGYGVNSDGARSSSLTAPNGAALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVP 80 (119)
T ss_dssp SEEEEEEEEEE-SSSTSSSSSTTHHHHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSE
T ss_pred CEEEEEEEEECCCCCCCCCcCcCHHHHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccc
Confidence 7999999999999 78888999999999999999999999999999999999999999999999999999875 3599
Q ss_pred cccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCC
Q 008146 494 VNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLE 532 (576)
Q Consensus 494 v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~ 532 (576)
|++.|+++||+++|+|++++++++++|++++|||++|++
T Consensus 81 v~s~K~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~n~~ 119 (119)
T PF02801_consen 81 VGSVKSNIGHTEAASGLLSLAKALLALEHGTIPPTINFE 119 (119)
T ss_dssp EE-THHHH-B-GGGHHHHHHHHHHHHHHHTEE--BTT-S
T ss_pred eeccccccccccccchHHHHHHHHHHHhcCCCCCCcCCC
Confidence 999999999999999999999999999999999999985
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A .... |
| >PRK05790 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.5e-23 Score=221.91 Aligned_cols=270 Identities=21% Similarity=0.292 Sum_probs=194.5
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
..|+.+++++||+|||+++++|| ++++|+..... .....+..+...+|
T Consensus 27 ~~La~~A~~~AL~dAgl~~~dID-------~vi~g~~~~~~-------------------------~~~~~~~~~~~~~g 74 (393)
T PRK05790 27 VELGAIVIKAALERAGVPPEQVD-------EVIMGQVLQAG-------------------------AGQNPARQAALKAG 74 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------eEEEEEecCCC-------------------------CCCcHHHHHHHHcC
Confidence 67899999999999999998776 78888653100 01112333555677
Q ss_pred CC--CccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhh-------------------------------
Q 008146 316 WM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG------------------------------- 362 (576)
Q Consensus 316 l~--Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~------------------------------- 362 (576)
+. .|.++|+.+|+|++.||..|+++|++|++|.+||+|+|.+.....
T Consensus 75 l~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (393)
T PRK05790 75 LPVEVPALTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNG 154 (393)
T ss_pred CCCCCceeeecccchHHHHHHHHHHHHHHcCCCCEEEEEeeeccccCcccccccccccccCcchhhhhhcccccccccCC
Confidence 74 489999999999999999999999999999999999997521100
Q ss_pred -hHHHHHhhhhhccCC--------------------------------------------CCCCCC------------CC
Q 008146 363 -LGGFVACRALSQRNN--------------------------------------------DPTKAS------------RP 385 (576)
Q Consensus 363 -~~~~~~~~~ls~~~~--------------------------------------------~p~~~~------------rp 385 (576)
..++...+.+.+.+. +++... +|
T Consensus 155 ~~~a~~a~~y~~~yG~tre~la~vav~~~~~A~~~~~~g~~~~~i~P~~~~~~~~~~~~~~~d~~~~~~~~~e~l~~~~~ 234 (393)
T PRK05790 155 YHMGITAENLAEQYGITREEQDEFALASQQKAEAAIKAGRFKDEIVPVTIKQRKGDPVVVDTDEHPRPDTTAESLAKLRP 234 (393)
T ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeEEecCCCCCceEecCCCCCCCCCCHHHHhCCCC
Confidence 000000001000000 000000 01
Q ss_pred -Ccc-----CCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 008146 386 -WDI-----NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRE 459 (576)
Q Consensus 386 -fd~-----~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~ 459 (576)
||. ..|...++||++++||++++.|++++.+++++|+|++..... +.....+...+++++|+++|++++
T Consensus 235 v~~~~g~lt~~d~~~~~DGAaavvl~s~e~a~~~~~~~~~~I~g~~~~~~~-----~~~~~~~~~~a~~~a~~~Agi~~~ 309 (393)
T PRK05790 235 AFDKDGTVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGVD-----PAIMGIGPVPAIRKALEKAGWSLA 309 (393)
T ss_pred ccCCCCCEeCCcCCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEccCC-----CCccchhHHHHHHHHHHHcCCCHH
Confidence 111 014567899999999999999999999999999999987532 222334567899999999999999
Q ss_pred CccEEEecCCCCccCcHHHHHHHHHHHcC-CCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCC
Q 008146 460 DVNYINAHATSTPAGDIKEYQALIHCFGQ-NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVV 538 (576)
Q Consensus 460 dId~ve~Hgtgt~~gD~~E~~Al~~~f~~-~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~ 538 (576)
|||++|+|+..+. .++ ...+.||- ..++++++.+..+||+.||+|+.+++.++.+|+..
T Consensus 310 did~~e~~d~f~~----~~l-~~~e~lg~~~~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL~~~--------------- 369 (393)
T PRK05790 310 DLDLIEINEAFAA----QAL-AVEKELGLDPEKVNVNGGAIALGHPIGASGARILVTLLHEMKRR--------------- 369 (393)
T ss_pred HCCEEEeCcHHHH----HHH-HHHHHhCCChhhcCCCcchhhhCcchhhhHHHHHHHHHHHHHhc---------------
Confidence 9999998876553 122 23345553 24678899999999999999999999999999862
Q ss_pred CcccccCCcccccCccEEEEeccCCCcceeEEEEeeC
Q 008146 539 DTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 539 ~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~~ 575 (576)
..|+++++..|-||..+.+|||..
T Consensus 370 -------------~~~~gl~~~~~~~g~g~~~~~e~~ 393 (393)
T PRK05790 370 -------------GAKKGLATLCIGGGQGVALIVERP 393 (393)
T ss_pred -------------CCCeEEEEEeccCCceeEEEEEcC
Confidence 236788999999999999999863
|
|
| >PRK12578 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=8e-23 Score=217.50 Aligned_cols=282 Identities=18% Similarity=0.184 Sum_probs=194.1
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
..|+.+++++||+|+|+++++|| +|++|+.... ......+..++..+|
T Consensus 22 ~eLa~~A~~~AL~dAgi~~~dID-------~vi~g~~~~~-------------------------~~~~~~a~~v~~~lG 69 (385)
T PRK12578 22 QELAWESIKEALNDAGVSQTDIE-------LVVVGSTAYR-------------------------GIELYPAPIVAEYSG 69 (385)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccc-------------------------cccCChHHHHHHHhC
Confidence 57899999999999999998776 7888864310 001123567888999
Q ss_pred CCC-ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhh--------------------------hHHHHH
Q 008146 316 WMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG--------------------------LGGFVA 368 (576)
Q Consensus 316 l~G-p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~--------------------------~~~~~~ 368 (576)
+.+ +.++|+++|+|++.||..|+++|++|++|.+||+|+|.+..... +..+..
T Consensus 70 l~~~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~a~~a 149 (385)
T PRK12578 70 LTGKVPLRVEAMCATGLAASLTAYTAVASGLVDMAIAVGVDKMTEVDTSTSLAIGGRGGNYQWEYHFYGTTFPTYYALYA 149 (385)
T ss_pred CCCCCeeEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcccchhhhcccccccccccccCCCChHHHHHHHH
Confidence 976 77999999999999999999999999999999999997542110 001111
Q ss_pred hhhhhccC------------------CCCCCCC----------------CCCccCCCcceecCceEEEEEcchHHHHhcC
Q 008146 369 CRALSQRN------------------NDPTKAS----------------RPWDINRDGFVMGEGAGVLLLEELEHAKKRG 414 (576)
Q Consensus 369 ~~~ls~~~------------------~~p~~~~----------------rpfd~~~~G~v~gEGAaalvL~~~~~A~~~g 414 (576)
.+.+...+ .+|.... .|+ ..-|...++||++++||++++.|++.+
T Consensus 150 ~~~m~~~g~t~e~~a~va~~~~~~A~~np~a~~~~~i~~e~v~~s~~i~~Pl-~~~d~~~~~DGAaA~vl~s~e~A~~l~ 228 (385)
T PRK12578 150 TRHMAVYGTTEEQMALVSVKAHKYGAMNPKAHFQKPVTVEEVLKSRAISWPI-KLLDSCPISDGSATAIFASEEKVKELK 228 (385)
T ss_pred HHHHHHhCcCHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCccCCCc-cHhhcCCcCCCeEEEEEecHHHHHhcC
Confidence 11111110 0122111 111 123555689999999999999999988
Q ss_pred CeeeEEEEEEEEecCCCCCCC-CCCCh-HHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHH-HcC---
Q 008146 415 AKIYAEFRGGSFTSDAYHMTE-PHPDG-VGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHC-FGQ--- 488 (576)
Q Consensus 415 ~~i~a~I~g~~~~~dg~~~~~-~~p~~-~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~-f~~--- 488 (576)
.+++++|+|++..++..+... ++... .+...+++++|+++|++++|||++|+|++++. .|+..++.. |..
T Consensus 229 ~~~~~~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~DiD~~ei~d~ft~----~~l~~le~lGl~~~G~ 304 (385)
T PRK12578 229 IDSPVWITGIGYANDYAYVARRGEWVGFKATQLAARQAYNMAKVTPNDIEVATVHDAFTI----AEIMGYEDLGFTEKGK 304 (385)
T ss_pred CCCCeEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcChH----HHHHHHHHcCCCCCCc
Confidence 767789999999877665432 22222 35678999999999999999999999999995 666665533 111
Q ss_pred ------------CCCcccccccc--cccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCcc
Q 008146 489 ------------NRGLRVNSTKS--MIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVK 554 (576)
Q Consensus 489 ------------~~~~~v~s~K~--~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~ 554 (576)
..++||+..-+ ..||+.||+|+.+++.+++||+...= .+..+...+
T Consensus 305 ~~~~~~~G~~~~~G~~pvN~~GG~la~GhP~gatG~~~v~e~~~qLrg~ag--------------------~~qv~~~~~ 364 (385)
T PRK12578 305 GGKFIEEGQSEKGGKVGVNLFGGLKAKGHPLGATGLSMIYEITKQLRDEAG--------------------KLQQPLKKY 364 (385)
T ss_pred hHHHHHCCCccCCCCeeeCCCCCcccCCCCccHHHHHHHHHHHHHHhCCcc--------------------cCcCCcchh
Confidence 01234544444 45999999999999999999986210 001111245
Q ss_pred EEEEeccC-CCcceeEEEEee
Q 008146 555 AALSNSFG-FGGHNSSIIFSP 574 (576)
Q Consensus 555 ~alv~sfG-~gG~na~vil~~ 574 (576)
++++.++| .|.++..+||++
T Consensus 365 ~~l~~~~Gg~~~~~~~~v~~~ 385 (385)
T PRK12578 365 IGLVHNVGGTGHFAYVMILRR 385 (385)
T ss_pred eEEEeccCcchhhEEEEEEeC
Confidence 78888887 444555666653
|
|
| >PRK07108 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.9e-23 Score=220.37 Aligned_cols=271 Identities=18% Similarity=0.218 Sum_probs=198.3
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
...|+.+++++||+|+|+++++|| .|++|+...+.. .....+..++..+
T Consensus 27 ~~dL~~~A~~~aL~~agi~~~~ID-------~vi~G~~~~~~~------------------------~~~~~a~~i~~~l 75 (392)
T PRK07108 27 GATLGGHVVQHAVERAKLDPAEVE-------DVIMGCANPEGA------------------------TGANIARQIALRA 75 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------cEEEEEeecccc------------------------cccHHHHHHHHHc
Confidence 467899999999999999998776 588987642210 1123677888888
Q ss_pred CCC--CccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhh--------h--H------HHHHhhh-----
Q 008146 315 GWM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG--------L--G------GFVACRA----- 371 (576)
Q Consensus 315 gl~--Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~--------~--~------~~~~~~~----- 371 (576)
|+. .|+++|+++|+||+.||+.|+++|++|++|++||||+|.+..... . . .+..++.
T Consensus 76 Gl~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vlagGvE~ms~~p~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~ 155 (392)
T PRK07108 76 GLPVTVPGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESISCVQNEMNRHMLREGWLVEHKPEIYWSMLQTAENV 155 (392)
T ss_pred CCCCCCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCCCcCCCcCccchhhhccCCccccCHHHHHHHH
Confidence 985 699999999999999999999999999999999999998753210 0 0 0000000
Q ss_pred ----------------hhc-------cCC----------------CCCCC--------------------------CC-C
Q 008146 372 ----------------LSQ-------RNN----------------DPTKA--------------------------SR-P 385 (576)
Q Consensus 372 ----------------ls~-------~~~----------------~p~~~--------------------------~r-p 385 (576)
.+. .+. +|... .+ +
T Consensus 156 a~~~~i~r~~~d~~a~~s~~~A~~A~k~g~~~~ei~pv~~~~~~~n~~a~~~~~~~~~~~~de~~r~~~t~e~l~~l~~~ 235 (392)
T PRK07108 156 AKRYGISKERQDEYGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRPDTTLEGVSKIRSA 235 (392)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCceeeEEecccccccccCcccccceeEccCCCCCCCCCHHHHhcCCCC
Confidence 000 000 02110 11 1
Q ss_pred Cc----cCCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCc
Q 008146 386 WD----INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDV 461 (576)
Q Consensus 386 fd----~~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dI 461 (576)
|. ...|...++||++++||++++.|+++|.+++++|+|++...+ .|.+.+.+...+++++|+++|++++||
T Consensus 236 ~~~g~lt~~n~~~~~DGAaa~vl~s~~~A~~~g~~~~~~i~g~~~~~~-----~~~~~~~~~~~a~~~al~~agl~~~Di 310 (392)
T PRK07108 236 LPGGVITAGNASQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGC-----EPDEMGIGPVFAVPKLLKQAGLKVDDI 310 (392)
T ss_pred CCCCCCcCCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEecc-----CCcccchhHHHHHHHHHHHcCCCHHHc
Confidence 21 113444579999999999999999999999999999998754 234445567899999999999999999
Q ss_pred cEEEecCCCCccCcHHHHHHHHHHHcC-CCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCc
Q 008146 462 NYINAHATSTPAGDIKEYQALIHCFGQ-NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDT 540 (576)
Q Consensus 462 d~ve~Hgtgt~~gD~~E~~Al~~~f~~-~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~ 540 (576)
|++|.|...+. .|+..+ +.++- ..++++++.+..+||+.||+|+..++.++.+|++.
T Consensus 311 d~~ei~eafa~----~~l~~~-e~lg~~~~~vN~~GG~~a~GHp~gatG~r~~~~l~~~l~~~----------------- 368 (392)
T PRK07108 311 DLWELNEAFAV----QVLYCR-DTLGIPMDRLNVNGGAIAVGHPYGVSGARLTGHALIEGKRR----------------- 368 (392)
T ss_pred CchHhhhHHHH----HHHHHH-HhcCCCccccCCCCChHHhCcchhhhHHHHHHHHHHHHHhh-----------------
Confidence 99998755542 222222 22332 24688899999999999999999999999999751
Q ss_pred ccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 541 NVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 541 ~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
..++++++..+-||.-..+|||.
T Consensus 369 -----------~~~~g~~~~c~~gg~g~a~~ie~ 391 (392)
T PRK07108 369 -----------GAKYVVVTMCIGGGQGAAGLFEV 391 (392)
T ss_pred -----------CCCEEEEEEccccChhhEEEEEe
Confidence 23567888888899999999985
|
|
| >PRK13359 beta-ketoadipyl CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.2e-23 Score=219.20 Aligned_cols=268 Identities=21% Similarity=0.237 Sum_probs=195.5
Q ss_pred HHHHHHHHHHHHH-hCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 236 MLYLLTAGKKALA-DGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 236 ~rl~l~aa~eAL~-dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
..|+.++.+++|+ ++|+++++|| .||+|+.... +.....++..++...
T Consensus 27 ~~L~~~a~~~al~r~a~i~~~~Id-------~vi~G~~~~~------------------------~~~g~~~ar~~~l~~ 75 (400)
T PRK13359 27 DDLGAVPLKALVERNPDVDWAAID-------DVIYGCANQA------------------------GEDNRNVARMSLLLA 75 (400)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCC-------EEEEEecccc------------------------ccccccHHHHHHHHc
Confidence 4578889999999 5799998777 6999975411 001134577888889
Q ss_pred CCC--CccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccc-hhhhH----H----------------------
Q 008146 315 GWM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PIGLG----G---------------------- 365 (576)
Q Consensus 315 gl~--Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~-p~~~~----~---------------------- 365 (576)
||. -|.++|+++|+||+.|+.+|+++|++|++|++||||+|+|.. |+.+. .
T Consensus 76 Gl~~~vp~~tV~~~CaSG~~Av~~A~~~I~sG~~divlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (400)
T PRK13359 76 GLPHGVPGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMSRAPFVMGKAESAFSRQAEIFDTTIGWRFVNPLMK 155 (400)
T ss_pred CCCCCCceEEEeccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCccccccccccccCCcccccccccccccCCccc
Confidence 995 499999999999999999999999999999999999998864 31000 0
Q ss_pred --HH--Hhhhh----h-ccCC-------------------CCCC-------------------------CCC--------
Q 008146 366 --FV--ACRAL----S-QRNN-------------------DPTK-------------------------ASR-------- 384 (576)
Q Consensus 366 --~~--~~~~l----s-~~~~-------------------~p~~-------------------------~~r-------- 384 (576)
+. .++.. . ..+. .|.+ ..|
T Consensus 156 ~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~Sh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~De~~r~~t~e~l~ 235 (400)
T PRK13359 156 QLYGVDSMPETAENVATDYNVSRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQKKGDPLVVSRDEHPRETTLEALA 235 (400)
T ss_pred cccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCCccceeeeeeccCCCCceeecCCCCCCCCCHHHHh
Confidence 00 00000 0 0000 0000 001
Q ss_pred ----CCccC-----CCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcC
Q 008146 385 ----PWDIN-----RDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSG 455 (576)
Q Consensus 385 ----pfd~~-----~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Ag 455 (576)
.|+.+ .+...++|||+++||++++.|+++|.+++++|+|++... ..+.+.+.+...+++++|+++|
T Consensus 236 ~l~p~f~~~g~lT~~n~~~~~DGAaa~vL~s~e~A~~~g~~~~a~I~g~~~~~-----~~p~~~~~~~~~A~~~al~~AG 310 (400)
T PRK13359 236 KLKGVVRPDGTVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAG-----VEPRVMGIGPAPATQKLLARLG 310 (400)
T ss_pred cCCCccCCCCceecccccCccCceEEEEEecHHHHHHCCCCccEEEEEEEEec-----CCCCccchhHHHHHHHHHHHhC
Confidence 12221 222336899999999999999999999999999998863 2344566677899999999999
Q ss_pred CCCCCccEEEecCCCCccCcHHHHHHH--HHHHcCC-CCccccccccc--ccccccchhHHHHHHHHHHHHcCCCCCCCC
Q 008146 456 VSREDVNYINAHATSTPAGDIKEYQAL--IHCFGQN-RGLRVNSTKSM--IGHLLGAAGAVEAIAVVQAIRTGWIHPNIN 530 (576)
Q Consensus 456 l~~~dId~ve~Hgtgt~~gD~~E~~Al--~~~f~~~-~~~~v~s~K~~--iGH~~gAsG~~~li~~~l~L~~g~ipp~~~ 530 (576)
++++||||||.| |..+...+ .+.|+-. ...+++..++. +||+.||+|+.+++.++.+|+..
T Consensus 311 l~~~DID~iei~-------dafa~~~l~~~e~lg~~~~~~pvN~~GG~la~GHp~gasG~~~v~e~~~qL~~~------- 376 (400)
T PRK13359 311 MTLDQFDVIELN-------EAFASQGLAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVTTALYQLERT------- 376 (400)
T ss_pred CCHHHcCcCccC-------cHhHHHHHHHHHHcCCCCCCCCEECCCchhhcCCchhHHHHHHHHHHHHHHhhc-------
Confidence 999999999965 55554443 4556632 23688888886 79999999999999999999851
Q ss_pred CCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 531 LENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 531 ~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
..++++.+..+-||.-..+|||+
T Consensus 377 ---------------------~~~~g~~~~c~~gG~g~a~~ie~ 399 (400)
T PRK13359 377 ---------------------GGRFALCTMCIGVGQGIAIAIER 399 (400)
T ss_pred ---------------------CCCeEEEEEcccCCceeEEEEEe
Confidence 23567777788889999999986
|
|
| >PRK08242 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-22 Score=215.06 Aligned_cols=270 Identities=19% Similarity=0.233 Sum_probs=196.4
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
..|+.++++++|+++|+++++|| -|++|+..... ...+..+...+...|
T Consensus 29 ~dLa~~A~~~al~~agi~p~~ID-------~vi~G~~~~~~------------------------~~~~~~~r~a~~~~G 77 (402)
T PRK08242 29 VRLAAGLLEALRDRNGLDTAAVD-------DVVLGCVTPVG------------------------DQGADIARTAVLAAG 77 (402)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC-------EEEEEecCCCc------------------------cccccHHHHHHHHcC
Confidence 45788999999999999998777 58888764210 011234555667778
Q ss_pred C--CCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccc-hhh----------hHH----HHHhh--------
Q 008146 316 W--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PIG----------LGG----FVACR-------- 370 (576)
Q Consensus 316 l--~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~-p~~----------~~~----~~~~~-------- 370 (576)
+ +-|.++|+.+|+|++.||+.|+++|++|.+|++|++|+|.+.. |+. +.. +..++
T Consensus 78 l~~~~pa~~Vn~aCaSg~~Ai~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~mg~~Ae~~a~ 157 (402)
T PRK08242 78 LPETVPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESMSRVPMGSDGGAWAMDPSTNFPTYFVPQGISADLIAT 157 (402)
T ss_pred CCCCCCeEEEcchhhhHHHHHHHHHHHHHcCCCCEEEEEEEEccCCCcccccCcccccCcccccccccCCHHHHHHHHHH
Confidence 8 3599999999999999999999999999999999999998754 210 000 00001
Q ss_pred -------------------hhh--------c--------cC---CCCCCCCC------------C-CccCC---------
Q 008146 371 -------------------ALS--------Q--------RN---NDPTKASR------------P-WDINR--------- 390 (576)
Q Consensus 371 -------------------~ls--------~--------~~---~~p~~~~r------------p-fd~~~--------- 390 (576)
... . .+ .+++...| | |+...
T Consensus 158 ~~gisRe~~d~~A~~Sh~~A~~A~~~g~f~~ei~pv~~~~~~~~~~~de~~r~~~t~e~l~~l~p~f~~~~~~~g~~~~~ 237 (402)
T PRK08242 158 KYGFSREDVDAYAVESQQRAAAAWAEGYFAKSVVPVKDQNGLTILDHDEHMRPGTTMESLAKLKPSFAMMGEMGGFDAVA 237 (402)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeecCCCCEeeCCCCCCCCCCCHHHHhCCCCCccCccccCcccccc
Confidence 110 0 00 12333222 2 43311
Q ss_pred -----------------CcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHH
Q 008146 391 -----------------DGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAH 453 (576)
Q Consensus 391 -----------------~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~ 453 (576)
|...++|||+++||++++.|+++|.+++++|.|++...+.... ...+...+++++|++
T Consensus 238 ~~~~~~~~~~~~~vTagn~s~~~DGAaAlvl~s~e~A~~~g~~p~a~I~g~~~~~~~~~~-----~~~~~~~a~~~al~~ 312 (402)
T PRK08242 238 LQKYPEVERINHVHHAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARIVATATIGSDPTI-----MLTGPVPATRKALAK 312 (402)
T ss_pred cccccccccccCceecCcCCCCCCceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchh-----hcccHHHHHHHHHHH
Confidence 3335799999999999999999999999999999887553221 223446799999999
Q ss_pred cCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcC-CCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCC
Q 008146 454 SGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQ-NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLE 532 (576)
Q Consensus 454 Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~-~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~ 532 (576)
+|++++|||++|+|...+. .+ .+..+.||- ..++++++.+..+||+.||+|+..++.++++|+++
T Consensus 313 AGl~~~DID~~ei~daFa~----~~-l~~~e~lG~~~~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~~~--------- 378 (402)
T PRK08242 313 AGLTVDDIDLFELNEAFAS----VV-LRFMQALDIPHDKVNVNGGAIAMGHPLGATGAMILGTVLDELERR--------- 378 (402)
T ss_pred cCCCHHHCCEEEecchhhH----HH-HHHHHHhCCCCcCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHHhc---------
Confidence 9999999999998765553 22 223455553 24688999999999999999999999999999851
Q ss_pred CCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 533 NPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 533 ~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
..++++.+.-.-||.-..+|||.
T Consensus 379 -------------------~~~~g~~~~c~ggG~g~a~~~e~ 401 (402)
T PRK08242 379 -------------------GKRTALITLCVGGGMGIATIIER 401 (402)
T ss_pred -------------------CCCeEEEEEcccCCceeEEEEEe
Confidence 23567777788889999999986
|
|
| >PRK09052 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-22 Score=215.38 Aligned_cols=269 Identities=22% Similarity=0.291 Sum_probs=191.5
Q ss_pred HHHHHHHHHHHHHhC-CCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 236 MLYLLTAGKKALADG-GITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 236 ~rl~l~aa~eAL~dA-Gi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
..|+.+++++||+|+ |+++++|| .|++|+..... ......+..+...+
T Consensus 32 ~eLa~~A~~~AL~~a~gl~~~dID-------~vi~g~~~~~~------------------------~~~~~~ar~~~~~~ 80 (399)
T PRK09052 32 DDLLAHVLRSAVAQVPGLDPKLIE-------DAIVGCAMPEA------------------------EQGLNVARIGALLA 80 (399)
T ss_pred HHHHHHHHHHHHHhccCcCHHHCC-------EEEEEecCCCC------------------------CCCchHHHHHHHHc
Confidence 578999999999997 99998777 69999754211 00122233355566
Q ss_pred CCC--CccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhh-----------h-----------HHHHHhh
Q 008146 315 GWM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG-----------L-----------GGFVACR 370 (576)
Q Consensus 315 gl~--Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~-----------~-----------~~~~~~~ 370 (576)
|+. -|+++|+++|+||+.|++.|+++|++|++|++||+|+|.+..... + .++....
T Consensus 81 Gl~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 160 (399)
T PRK09052 81 GLPNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMSMVPMMGNKPSMSPAIFARDENVGIAYGMGLTAEK 160 (399)
T ss_pred CCCCCCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccccCcccCcccccCcchhccCCcccccchHHHHHHH
Confidence 885 379999999999999999999999999999999999997643210 0 0000000
Q ss_pred hhhccCC-----------------------------CCCC--CC------------CC----------------------
Q 008146 371 ALSQRNN-----------------------------DPTK--AS------------RP---------------------- 385 (576)
Q Consensus 371 ~ls~~~~-----------------------------~p~~--~~------------rp---------------------- 385 (576)
.+...+. .|.. .. .|
T Consensus 161 ~~~~ygitre~~d~~a~~sh~~a~~n~~ag~~~~ei~~~~v~~~~~~~~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p 240 (399)
T PRK09052 161 VAEQWKVSREDQDAFALESHQKAIAAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEGLAKLKP 240 (399)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEeccccccccccCcccccceEeccCCCCCCCCCHHHHhcCCC
Confidence 0000000 0110 00 00
Q ss_pred -Ccc-----CCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 008146 386 -WDI-----NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRE 459 (576)
Q Consensus 386 -fd~-----~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~ 459 (576)
|+. ..|...++||++++||++++.|+++|.+++++|.|++..... +.+.+.+...+++++|+++|++++
T Consensus 241 ~f~~~g~lt~~n~s~~~DGAaa~vl~se~~a~~~g~~~~a~i~g~~~~~~~-----~~~~~~~~~~A~~~al~~Agi~~~ 315 (399)
T PRK09052 241 VFANKGSVTAGNSSQTSDGAGAVILVSEKALKQFNLTPLARFVSFAVAGVP-----PEIMGIGPIEAIPAALKQAGLKQD 315 (399)
T ss_pred ccCCCCcEECCccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEeccC-----CCccchhHHHHHHHHHHHcCCCHH
Confidence 110 012255799999999999999999999999999999987542 334455678999999999999999
Q ss_pred CccEEEecCCCCccCcHHHHHHHHHHHcCCCCcccccccc--cccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCC
Q 008146 460 DVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKS--MIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAV 537 (576)
Q Consensus 460 dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~~~~v~s~K~--~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~ 537 (576)
|||+||+|+..+ ++..+..+.|+-. +.+++..++ .+||+.||+|+++++.++++|+++
T Consensus 316 did~~ei~D~f~-----~~~l~~~e~lg~~-~~~vN~~GG~la~GHp~gasG~~~~~~~~~~L~~~-------------- 375 (399)
T PRK09052 316 DLDWIELNEAFA-----AQSLAVIRDLGLD-PSKVNPLGGAIALGHPLGATGAIRTATVVHGLRRT-------------- 375 (399)
T ss_pred HcCEEEeCcHHH-----HHHHHHHHHhCCC-CcccCCCCchhhcCchHHHHHHHHHHHHHHHHHhc--------------
Confidence 999999764433 2333445667743 245666666 679999999999999999999861
Q ss_pred CCcccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 538 VDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
..++++.+..+-||.-..+|||.
T Consensus 376 --------------~~~~g~~~~c~~gg~g~a~~~e~ 398 (399)
T PRK09052 376 --------------NLKYGMVTMCVGTGMGAAGIFER 398 (399)
T ss_pred --------------CCCeEEEEEcccCCceeEEEEEe
Confidence 23567788888899999999986
|
|
| >TIGR02430 pcaF beta-ketoadipyl CoA thiolase | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.3e-23 Score=217.36 Aligned_cols=271 Identities=20% Similarity=0.239 Sum_probs=197.4
Q ss_pred HHHHHHHHHHHHH-hCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 236 MLYLLTAGKKALA-DGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 236 ~rl~l~aa~eAL~-dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
..|+.++.+++|+ |+|+++++|| .|++|+.... +......+..++..+
T Consensus 26 ~~L~~~a~~~al~~~a~i~~~~Id-------~v~~G~~~~~------------------------~~~~~~~ar~~~~~~ 74 (400)
T TIGR02430 26 DDLAAVPIKALLARNPQLDWAAID-------DVIYGCANQA------------------------GEDNRNVARMAALLA 74 (400)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCC-------EEEEEecccc------------------------ccccccHHHHHHHHc
Confidence 5688999999999 6899998777 6999975310 111133566788999
Q ss_pred CCC--CccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhh--------h---------------------
Q 008146 315 GWM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG--------L--------------------- 363 (576)
Q Consensus 315 gl~--Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~--------~--------------------- 363 (576)
|+. -|.++|+++|+||+.|+..|+++|++|++|++||||+|.+..... +
T Consensus 75 Gl~~~~p~~~V~~~CaSG~~Ai~~a~~~I~sG~~d~~la~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (400)
T TIGR02430 75 GLPVSVPGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMSRAPFVMGKADSAFSRSAKIEDTTIGWRFINPLMK 154 (400)
T ss_pred CCCCCCceEEeechhhhHHHHHHHHHHHHHCCCCCEEEEeccccccCCcccccccccccccccccccccccccccCcccc
Confidence 996 499999999999999999999999999999999999998864210 0
Q ss_pred HHHH-------------Hhhh-------hh---------------------------ccC----CCCCCCCC--------
Q 008146 364 GGFV-------------ACRA-------LS---------------------------QRN----NDPTKASR-------- 384 (576)
Q Consensus 364 ~~~~-------------~~~~-------ls---------------------------~~~----~~p~~~~r-------- 384 (576)
..+. +.+. ++ ..+ .+|+...|
T Consensus 155 ~~~~~~~M~~~ae~~a~~ygisre~~d~~A~~Sh~~a~~a~~~g~~~~ei~pv~vk~~~~~~~~~n~da~~r~~~t~e~l 234 (400)
T TIGR02430 155 ALYGVDSMPETAENVAEEFGISREDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQKKGEPTVVDQDEHPRPETTLEGL 234 (400)
T ss_pred cccccCcHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeccCCCCceeeCCCCccCCCCCHHHH
Confidence 0000 0000 00 000 12222222
Q ss_pred ----C-Ccc-----CCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHc
Q 008146 385 ----P-WDI-----NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHS 454 (576)
Q Consensus 385 ----p-fd~-----~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~A 454 (576)
| |+. ..|...++||++++||++++.|+++|.+++++|+|++..... +.+.+.+...+++++|+++
T Consensus 235 ~~~~~v~~p~g~lt~~~~s~~~DGAaa~vl~s~e~A~~~g~~~~~~I~g~~~~~~~-----~~~~~~~~~~a~~~al~~A 309 (400)
T TIGR02430 235 AKLKPVVRPDGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGVE-----PRIMGIGPVPATQKLLARA 309 (400)
T ss_pred hcCCCcccCCCCEeccccCCcCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCC-----CccccchHHHHHHHHHHHh
Confidence 1 221 134445799999999999999999999999999999877532 2334456789999999999
Q ss_pred CCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCC-CCccccccccc--ccccccchhHHHHHHHHHHHHcCCCCCCCCC
Q 008146 455 GVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSM--IGHLLGAAGAVEAIAVVQAIRTGWIHPNINL 531 (576)
Q Consensus 455 gl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~-~~~~v~s~K~~--iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~ 531 (576)
|++++||||||.|+..+ .+.....+.|+-. ...+++..++. +||+.||+|+.+++.++.||+..
T Consensus 310 gl~~~DID~~ei~D~f~-----~~~l~~~e~lG~~~~~~pvN~~GG~la~GHp~gasG~~~~~e~~~qLr~~-------- 376 (400)
T TIGR02430 310 GLSIDQFDVIELNEAFA-----AQALAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVLTALRQLERS-------- 376 (400)
T ss_pred CCCHHHCCCcccCcHHH-----HHHHHHHHHcCCCCCCCeECCCCchHhccChHHHHHHHHHHHHHHHHHhc--------
Confidence 99999999999664433 2334445677742 23678888885 79999999999999999999851
Q ss_pred CCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEeeC
Q 008146 532 ENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 532 ~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~~ 575 (576)
..++.+++...-||.-..+|||.+
T Consensus 377 --------------------~~~~g~~~~c~~gG~g~a~~~e~~ 400 (400)
T TIGR02430 377 --------------------GGRYALCTMCIGVGQGIALAIERV 400 (400)
T ss_pred --------------------CCCEEEEEEccccChhhEEEEEeC
Confidence 235577777788888999999863
|
Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. |
| >PRK06445 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.4e-23 Score=217.19 Aligned_cols=273 Identities=19% Similarity=0.236 Sum_probs=195.0
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
..|+.+++++||+|+|+++++|| .|++|+....... + ........+...++
T Consensus 33 ~~L~~~a~~~AL~~agl~~~dID-------~vi~g~~~~~~~~--------------------~--~~~~~~~~l~a~~~ 83 (394)
T PRK06445 33 EELAAMLINRLIEKTGIKPEEID-------DIITGCALQVGEN--------------------W--LYGGRHPIFLARLP 83 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------eeEEEeecCCCcc--------------------c--ccHHHHHHHHcCCC
Confidence 56899999999999999998776 6888875421100 0 00000111222234
Q ss_pred CCCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchh-----------hh----------------HHHHH
Q 008146 316 WMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI-----------GL----------------GGFVA 368 (576)
Q Consensus 316 l~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~-----------~~----------------~~~~~ 368 (576)
..-|+++|+++|+|++.|++.|+++|++|.+|++||+|+|.+.... .+ .++..
T Consensus 84 ~~~p~~~V~~~CaSg~~ai~~A~~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a 163 (394)
T PRK06445 84 YNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGGVEHMTRTPMGDNPHIEPNPKLLTDPKYIEYDLTTGYVMGLTA 163 (394)
T ss_pred CCCcchhhhhhhHHHHHHHHHHHHHHHcCCCCEEEEeeecccccCccccCccccCChhhccccccCcccccCCCCHHHHH
Confidence 4469999999999999999999999999999999999999654210 00 00000
Q ss_pred hhhhhcc-------------------C------------------------CCCCCCCC------------C-Cc-----
Q 008146 369 CRALSQR-------------------N------------------------NDPTKASR------------P-WD----- 387 (576)
Q Consensus 369 ~~~ls~~-------------------~------------------------~~p~~~~r------------p-fd----- 387 (576)
...+.+. . .+|+...| | |+
T Consensus 164 ~~~~~~ygitre~~a~va~~sh~~A~~a~~~g~~~~ei~p~~~~~~~~~~~~npda~~r~~~t~e~~~~~~~v~~~~g~l 243 (394)
T PRK06445 164 EKLAEEAGIKREEMDRWSLRSHQLAAKAIQEGYFKDEILPIEVEVEGKKKVVDVDQSVRPDTSLEKLAKLPPAFKPDGVI 243 (394)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeEEEecCCCCceeeCCCCCCCCCCCHHHHhcCCCccCCCCcE
Confidence 0000000 0 02322222 1 11
Q ss_pred cCCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEec
Q 008146 388 INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAH 467 (576)
Q Consensus 388 ~~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~H 467 (576)
...|...++||++++||++++.|++++.+++++|+|++...+. +.+.+.+...+++++|+++|++++||||+|+|
T Consensus 244 t~~~~~~~~DGAaavvl~s~~~A~~~~~~~~a~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~Agl~~~dId~~e~~ 318 (394)
T PRK06445 244 TAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRSFGFAGVP-----PAIMGKGPVPASKKALEKAGLSVKDIDLWEIN 318 (394)
T ss_pred ecCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEeccC-----CchhcchHHHHHHHHHHHcCCCHHHcCEEEec
Confidence 1123455799999999999999999999999999999987542 23344567899999999999999999999999
Q ss_pred CCCCccCcHHHHHHHHHHHcCCCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCc
Q 008146 468 ATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPK 547 (576)
Q Consensus 468 gtgt~~gD~~E~~Al~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~ 547 (576)
+.++. .|+..++...-...++++++....+||+.||+|+.+++.++.+|+.
T Consensus 319 d~f~~----~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~------------------------- 369 (394)
T PRK06445 319 EAFAV----VVLYAIKELGLDPETVNIKGGAIAIGHPLGATGARIVGTLARQLQI------------------------- 369 (394)
T ss_pred ccchH----HHHHHHHHhCCCccccCCCCCHHHcCCCccchHHHHHHHHHHHHHh-------------------------
Confidence 98885 5555555442123457778888888999999999999999999971
Q ss_pred ccccCccEEEEeccCCCcceeEEEEee
Q 008146 548 KERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 548 ~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
...++++.+.-+-||+...+|||.
T Consensus 370 ---~~~~~gl~~~~~~gg~g~a~~~e~ 393 (394)
T PRK06445 370 ---KGKDYGVATLCVGGGQGGAVVLER 393 (394)
T ss_pred ---cCCCEEEEEEcccCChhhEEEEEc
Confidence 134678889999999999999985
|
|
| >PLN02287 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-22 Score=217.72 Aligned_cols=273 Identities=16% Similarity=0.234 Sum_probs=194.6
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
..|+.+++++||+|+|+++++|| +|++|+...... .....+..++..+|
T Consensus 72 ~eLa~eA~~~AL~dAgl~~~dID-------~vv~G~~~~~~~------------------------~~~~~~r~~a~~~G 120 (452)
T PLN02287 72 DDLLAPVLKAVVEKTGLNPSEVG-------DIVVGTVLAPGS------------------------QRANECRMAAFYAG 120 (452)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeecCccc------------------------ccchHHHHHHHHCC
Confidence 67899999999999999998777 688887532110 01122345667789
Q ss_pred CCC--ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhh---------h------------HHHHHhhhh
Q 008146 316 WMG--PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG---------L------------GGFVACRAL 372 (576)
Q Consensus 316 l~G--p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~---------~------------~~~~~~~~l 372 (576)
+.. |.++|+++|+||+.|++.|+++|++|.+|++||+|+|.+..... + .++.....+
T Consensus 121 l~~~~pa~~V~~~CaSG~~Ai~~Aa~~I~sG~~dvvLv~GvE~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~y~ 200 (452)
T PLN02287 121 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGVESMTTNPMAWEGGVNPRVESFSQAQDCLLPMGITSENVA 200 (452)
T ss_pred CCCCcceEEEeccCchHHHHHHHHHHHHHcCCCCeEEEEeEEecCCCchhhccccCchhhccccccccCcCHHHHHHHHH
Confidence 864 88999999999999999999999999999999999998643210 0 000000001
Q ss_pred hccCC------------------CCCC-CC------------------------------------------CC-Ccc--
Q 008146 373 SQRNN------------------DPTK-AS------------------------------------------RP-WDI-- 388 (576)
Q Consensus 373 s~~~~------------------~p~~-~~------------------------------------------rp-fd~-- 388 (576)
...+. .|.. .. +| |+.
T Consensus 201 ~~yGitrE~la~vAvksh~nAa~np~ag~f~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~~~e~l~~l~~v~~~~g 280 (452)
T PLN02287 201 ERFGVTREEQDQAAVESHRKAAAATASGKFKDEIVPVHTKIVDPKTGEEKPIVISVDDGIRPNTTLADLAKLKPVFKKNG 280 (452)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeeeeccccccccCCccceeecccCCCCCCCCHHHHhcCCCccCCCC
Confidence 00000 0110 00 01 110
Q ss_pred ---CCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEE
Q 008146 389 ---NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYIN 465 (576)
Q Consensus 389 ---~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve 465 (576)
..|...++|||+++||++++.|++++.+|++++.+++... ..+.+.+.+...+++++|+++|++++|||++|
T Consensus 281 ~lt~~~~s~~sDGAaalvl~see~A~~~~~~~~a~~~~~~~~~-----~~~~~~~~~~~~A~~~al~~Agl~~~DID~~E 355 (452)
T PLN02287 281 TTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPILGVFRSFAAVG-----VDPAVMGIGPAVAIPAAVKAAGLELDDIDLFE 355 (452)
T ss_pred CEeccccCCcCCceEEEEEeeHHHHHHCCCCeEEEEEEEeecc-----CCCccchHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 0244558999999999999999999999999999987432 12444455678999999999999999999999
Q ss_pred ecCCCCccCcHHHHHHHHHHHcC-CCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCccccc
Q 008146 466 AHATSTPAGDIKEYQALIHCFGQ-NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLV 544 (576)
Q Consensus 466 ~Hgtgt~~gD~~E~~Al~~~f~~-~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~ 544 (576)
.|...+. .|+..++ .||- ..++++++.+..+||+.||+|+.+++.++++|++.-
T Consensus 356 i~daFa~----~~l~~~e-~lG~~~~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL~~~~-------------------- 410 (452)
T PLN02287 356 INEAFAS----QFVYCCK-KLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKRRG-------------------- 410 (452)
T ss_pred ecchHHH----HHHHHHH-HcCCCccccCCCCcHHhccCcHHHHHHHHHHHHHHHHHhcC--------------------
Confidence 9966653 3333332 3442 246888899999999999999999999999998510
Q ss_pred CCcccccCccEEEEeccCCCcceeEEEEeeC
Q 008146 545 GPKKERLEVKAALSNSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 545 ~~~~~~~~~~~alv~sfG~gG~na~vil~~~ 575 (576)
..-++++.+...-||.-..+|||..
T Consensus 411 ------~~~~~gl~~~c~ggG~g~a~~ie~~ 435 (452)
T PLN02287 411 ------KDCRFGVVSMCIGTGMGAAAVFERG 435 (452)
T ss_pred ------CCCCeeEEEEccccCceeEEEEEec
Confidence 0025677777888899999999875
|
|
| >PRK07661 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.5e-22 Score=214.96 Aligned_cols=268 Identities=21% Similarity=0.293 Sum_probs=196.5
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
..|+.+++++||+|+|+.+++|| .|++|+...+. ......+..++..+|
T Consensus 28 ~eLa~~A~~~AL~~ag~~~~dID-------~vi~g~~~~~~------------------------~~g~~~a~~~~~~lG 76 (391)
T PRK07661 28 DDLGALVVKETLKRAGNYEGPID-------DLIIGCAMPEA------------------------EQGLNMARNIGALAG 76 (391)
T ss_pred HHHHHHHHHHHHHhcCCChhHCC-------EEEEEeccccc------------------------cccchHHHHHHHHcC
Confidence 56899999999999998777666 68888653210 001223556888899
Q ss_pred CC--CccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchh-----------------hh---HHHHHhhhhh
Q 008146 316 WM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI-----------------GL---GGFVACRALS 373 (576)
Q Consensus 316 l~--Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~-----------------~~---~~~~~~~~ls 373 (576)
+. -|.++|+++|+||+.|+..|+++|++|++|++||+|+|.+.... .+ .++.....+.
T Consensus 77 l~~~~p~~~V~~aCaSG~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~m~~~a~~~~~ 156 (391)
T PRK07661 77 LPYTVPAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMSLVPMMGHVVRPNPRLVEAAPEYYMGMGHTAEQVAV 156 (391)
T ss_pred CCCCcceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEEEEeecccCCccccccCCCccccccccchhhhHHHHHHHHHH
Confidence 97 49999999999999999999999999999999999999865321 00 0100111110
Q ss_pred ccCC------------------CCCC----------------------------------CC------------CC-Cc-
Q 008146 374 QRNN------------------DPTK----------------------------------AS------------RP-WD- 387 (576)
Q Consensus 374 ~~~~------------------~p~~----------------------------------~~------------rp-fd- 387 (576)
..+. .|.. .. +| |.
T Consensus 157 ~~g~tre~~a~~av~s~~~a~~n~~ag~~~~ei~pi~~~~~~~~~~~~~~~~~~~~~~d~~~rp~~~~e~l~~l~p~f~~ 236 (391)
T PRK07661 157 KYGISREDQDAFAVRSHQRAAKALAEGKFADEIVPVDVTLRTVGENNKLQEETITFSQDEGVRADTTLEILGKLRPAFNV 236 (391)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeeecccccccccCcccccceeEecCCCCCCCCCHHHHhcCCCCcCC
Confidence 0000 0000 00 11 11
Q ss_pred ----cCCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccE
Q 008146 388 ----INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNY 463 (576)
Q Consensus 388 ----~~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ 463 (576)
...|...++|||+++||++++.|+++|.+++++|+|++...+. +.+.+.+...+++++|+++|++++|||+
T Consensus 237 ~g~lt~~~~~~~~DGAaavvl~s~~~A~~~g~~~~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~~did~ 311 (391)
T PRK07661 237 KGSVTAGNSSQMSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGVP-----PEVMGIGPIAAIPKALKLAGLELSDIGL 311 (391)
T ss_pred CCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEecCC-----CcccchHHHHHHHHHHHHcCCCHHHCCE
Confidence 1134445799999999999999999999999999999988542 2334457789999999999999999999
Q ss_pred EEecCCCCccCcHHHHHHHH--HHHcCC-CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCc
Q 008146 464 INAHATSTPAGDIKEYQALI--HCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDT 540 (576)
Q Consensus 464 ve~Hgtgt~~gD~~E~~Al~--~~f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~ 540 (576)
||.| |..+...+. +.|+-. .++++++.+..+||+.||+|+.+++.++++|+++
T Consensus 312 ~ei~-------d~f~~~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL~~~----------------- 367 (391)
T PRK07661 312 FELN-------EAFASQSIQVIRELGLDEEKVNVNGGAIALGHPLGCTGAKLTLSLIHEMKRR----------------- 367 (391)
T ss_pred EEeC-------CHHHHHHHHHHHHcCCCCCCCCCCCChHHhCCcHHHHHHHHHHHHHHHHHhc-----------------
Confidence 9965 556666655 356643 4678889999999999999999999999999851
Q ss_pred ccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 541 NVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 541 ~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
..++++.+..+-||.-..+|||.
T Consensus 368 -----------~~~~g~~~~c~~gg~g~a~~~e~ 390 (391)
T PRK07661 368 -----------NEQFGIVTMCIGGGMGAAGVFEL 390 (391)
T ss_pred -----------CCCeEEEEEccccChhhEEEEEe
Confidence 23567777888889999999885
|
|
| >PRK07516 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.1e-22 Score=210.42 Aligned_cols=287 Identities=22% Similarity=0.284 Sum_probs=190.0
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
..|+.+++++||+|+|+++++|+ +|++|+..++... .... .+..+...++
T Consensus 23 ~eL~~eA~~~AL~dAgl~~~dId-------~vi~g~~~~~~~~---------------------~~~~--~~~~~~~~~g 72 (389)
T PRK07516 23 ESLIVRVAREALAHAGIAAGDVD-------GIFLGHFNAGFSP---------------------QDFP--ASLVLQADPA 72 (389)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEEecCCccc---------------------cccc--hhHHHHHhcC
Confidence 57899999999999999998776 7888875322100 0000 1112233456
Q ss_pred CCC-ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhh-h------------------------HHHHHh
Q 008146 316 WMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG-L------------------------GGFVAC 369 (576)
Q Consensus 316 l~G-p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~-~------------------------~~~~~~ 369 (576)
++. |.++|+++|+|++.||+.|+++|++|++|.+||+|+|.+..... . .++...
T Consensus 73 l~~~p~~~v~~~CaSg~~Al~~A~~~I~sG~~d~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~ 152 (389)
T PRK07516 73 LRFKPATRVENACATGSAAVYAALDAIEAGRARIVLVVGAEKMTATPTAEVGDILLGASYLKEEGDTPGGFAGVFGRIAQ 152 (389)
T ss_pred CCCCceeeeccccHHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCcchhhHHHhhhccccccccccCCCcHHHHHHHHH
Confidence 654 89999999999999999999999999999999999998643210 0 000000
Q ss_pred hhhhccC------------------CCCCCC-CCCCc------------------cCCCcceecCceEEEEEcchHHHHh
Q 008146 370 RALSQRN------------------NDPTKA-SRPWD------------------INRDGFVMGEGAGVLLLEELEHAKK 412 (576)
Q Consensus 370 ~~ls~~~------------------~~p~~~-~rpfd------------------~~~~G~v~gEGAaalvL~~~~~A~~ 412 (576)
+.+.+.+ .+|... .+|++ ...|...++|||+++||++++.|++
T Consensus 153 ~y~~~yg~~~e~~a~vav~~~~~A~~nP~A~~~~~~t~~~~~~~~~~~~~i~~pl~~~d~~~~~DGAaa~il~s~~~a~~ 232 (389)
T PRK07516 153 AYFQRYGDQSDALAMIAAKNHANGVANPYAQMRKDLGFEFCRTVSEKNPLVAGPLRRTDCSLVSDGAAALVLADAETARA 232 (389)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhhhcCChhhcCCcccHHhhhhhhhcCCcccCCCchhhcCCcCcceEEEEEecHHHHHh
Confidence 0110000 012111 01111 1245566899999999999999988
Q ss_pred cCCeeeEEEEEEEEecCCCCCCCCCC-ChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHH--------
Q 008146 413 RGAKIYAEFRGGSFTSDAYHMTEPHP-DGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALI-------- 483 (576)
Q Consensus 413 ~g~~i~a~I~g~~~~~dg~~~~~~~p-~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~-------- 483 (576)
.+. +++|+|++..++..+....++ ...+...+++++|+++|++|+|||++|+|++++.. ...+.++|.
T Consensus 233 ~~~--~v~i~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~did~~e~~d~f~~~-~~~~~e~lg~~~~G~~~ 309 (389)
T PRK07516 233 LQR--AVRFRARAHVNDFLPLSRRDPLAFEGPRRAWQRALAQAGVTLDDLSFVETHDCFTIA-ELIEYEAMGLAPPGQGA 309 (389)
T ss_pred cCC--CEEEEEEEeccCcccccCCCccccHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCHH-HHHHHHHcCCCCCCchH
Confidence 753 578999999888665433333 34677789999999999999999999999999973 333444432
Q ss_pred HHHcC-----CCCccccc--ccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEE
Q 008146 484 HCFGQ-----NRGLRVNS--TKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAA 556 (576)
Q Consensus 484 ~~f~~-----~~~~~v~s--~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~a 556 (576)
+.+.. ...+||+. .--.+||+.||+|+.+++++++||+..- ...+-...+++
T Consensus 310 ~~~~~g~~~~~g~~pvN~sGG~la~Ghp~gasG~~~~~e~~~QL~g~a---------------------g~rQv~~a~~~ 368 (389)
T PRK07516 310 RAIREGWTAKDGKLPVNPSGGLKAKGHPIGATGVSMHVLAAMQLTGEA---------------------GGMQIPGAKLA 368 (389)
T ss_pred HHHHCCCccCCCCeeecCCCCcccCCCCccHHHHHHHHHHHHHhcCCc---------------------cCCcCCchhee
Confidence 11110 11244443 2224799999999999999999999731 01111245778
Q ss_pred EEeccC-CCcceeEEEEeeCC
Q 008146 557 LSNSFG-FGGHNSSIIFSPYK 576 (576)
Q Consensus 557 lv~sfG-~gG~na~vil~~~~ 576 (576)
++++.| .+.+++.+||++.+
T Consensus 369 l~~~~gg~~~~~~~~vl~~~~ 389 (389)
T PRK07516 369 GVFNMGGAAVANYVSILERVK 389 (389)
T ss_pred eeeccCcccceEEEEEEEecC
Confidence 888887 44456667777653
|
|
| >PRK06205 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.5e-22 Score=213.38 Aligned_cols=271 Identities=19% Similarity=0.285 Sum_probs=197.7
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
..|+.+++++||+|+|+++++|| .|++|+..... .....+..++..+|
T Consensus 27 ~eLa~~A~~~AL~~agl~~~dID-------~vv~g~~~~~~-------------------------~~~~~a~~va~~~G 74 (404)
T PRK06205 27 EELAATVIRALVERTGIDPARID-------DVIFGQGYPNG-------------------------EAPAIGRVAALDAG 74 (404)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCCC-------------------------CCChHHHHHHHHcC
Confidence 56889999999999999998776 68888754211 11234557888899
Q ss_pred CC--CccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchh----------------hhHH------------
Q 008146 316 WM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI----------------GLGG------------ 365 (576)
Q Consensus 316 l~--Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~----------------~~~~------------ 365 (576)
+. -|.++|+++|+|++.||+.|+++|++|.+|++||+|+|.+.... .+..
T Consensus 75 l~~~~p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (404)
T PRK06205 75 LPVTVPGMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMSNVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRR 154 (404)
T ss_pred CCCCCceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEeeehhhccCcccccccccccccCcchhhhhhccCcccccccc
Confidence 86 48999999999999999999999999999999999999764210 0000
Q ss_pred HH---Hh-----hhhhcc----------------C------------------------C----CCCCCCC---------
Q 008146 366 FV---AC-----RALSQR----------------N------------------------N----DPTKASR--------- 384 (576)
Q Consensus 366 ~~---~~-----~~ls~~----------------~------------------------~----~p~~~~r--------- 384 (576)
+. .+ ..+... + . +|+...|
T Consensus 155 ~~~~~~m~~~a~~~~~~~gitre~~~~~Av~sh~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~ 234 (404)
T PRK06205 155 FPVPGGMIETAENLRREYGISREEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKGDPTVVDRDEHPRADTTLESLA 234 (404)
T ss_pred cCCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeEecCCCCCceEeccCCCCCCCCCHHHHh
Confidence 00 00 000000 0 0 1222221
Q ss_pred ---C-Cc--------cCCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHH
Q 008146 385 ---P-WD--------INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALA 452 (576)
Q Consensus 385 ---p-fd--------~~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~ 452 (576)
| |+ ...+...++||++++||++++.|++.+.+++++|.|++...+... ..+.+...+++++|+
T Consensus 235 ~~~~v~~~~~p~g~lt~~~~~~~~DGAaa~vl~se~~A~~~~~~p~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~ 309 (404)
T PRK06205 235 KLRPIMGKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEPS-----RMGIGPVPATEKALA 309 (404)
T ss_pred cCCCcCccCCCCCceeCcccCCCCCceeEEEEecHHHHHHCCCCceEEEEEEEEeccCCc-----cccccHHHHHHHHHH
Confidence 1 21 123344468999999999999999999999999999998755322 222356899999999
Q ss_pred HcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHc--CC--CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCC
Q 008146 453 HSGVSREDVNYINAHATSTPAGDIKEYQALIHCFG--QN--RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPN 528 (576)
Q Consensus 453 ~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~--~~--~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~ 528 (576)
++|++++|||++|+|...+. .|+..+ +.|+ .. .++++.+.+..+||+.||+|+..++.++.+|+..
T Consensus 310 ~Agl~~~Did~~ei~d~f~~----~~l~~~-e~lg~~~~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~----- 379 (404)
T PRK06205 310 RAGLTLDDIDLIELNEAFAA----QVLAVL-KEWGFGADDEERLNVNGSGISLGHPVGATGGRILATLLRELQRR----- 379 (404)
T ss_pred HcCCCHHHCCEeeeccHHHH----HHHHHH-HHhCcCcccCCCcCCCCCHHhhCCChhhhHHHHHHHHHHHHHhc-----
Confidence 99999999999998876663 233322 3343 11 2578888888899999999999999999999862
Q ss_pred CCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEeeCC
Q 008146 529 INLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 576 (576)
Q Consensus 529 ~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~~~ 576 (576)
..++++++...-||.-..+|||+.+
T Consensus 380 -----------------------~~~~gl~~~c~~gg~g~a~~~e~~~ 404 (404)
T PRK06205 380 -----------------------QARYGLETMCIGGGQGLAAVFERVN 404 (404)
T ss_pred -----------------------CCCeEEEEEeccCChhhEEEEEecC
Confidence 2367888888999999999999764
|
|
| >PRK07851 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.3e-22 Score=214.59 Aligned_cols=271 Identities=18% Similarity=0.269 Sum_probs=195.8
Q ss_pred HHHHHHHHHHHHHhC-CCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 236 MLYLLTAGKKALADG-GITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 236 ~rl~l~aa~eAL~dA-Gi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
..|+.+++++||+|+ |+++++|| +|++|+.... .......+..++..+
T Consensus 28 ~eL~~~A~~~AL~da~gl~~~dID-------~vv~g~~~~~------------------------~~~g~~~~~~~a~~l 76 (406)
T PRK07851 28 DDLAAQMVRAALDKVPALDPTDID-------DLMLGCGLPG------------------------GEQGFNMARVVAVLL 76 (406)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCC-------EEEEEccccc------------------------ccccCCHHHHHHHHc
Confidence 578999999999997 99998777 7888753210 000112456788999
Q ss_pred CCCC-ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchh-------------------------------h
Q 008146 315 GWMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI-------------------------------G 362 (576)
Q Consensus 315 gl~G-p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~-------------------------------~ 362 (576)
|+.+ |+++|+++|+||+.||..|+++|++|.+|++||+|+|.+.... .
T Consensus 77 Gl~~~p~~~v~~~caSG~~av~~Aa~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (406)
T PRK07851 77 GYDFLPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRFAKGNSDSLPDTKNPLFAEAQARTAARAEGGAEA 156 (406)
T ss_pred CCCCCCeeeeeccchhHHHHHHHHHHHHHCCCCCEEEEeeEEecccCcccccccccccCchhhhhccccccccccccccc
Confidence 9976 8999999999999999999999999999999999999642110 0
Q ss_pred h-H---------HHHHhhh----------hhc------------------cCC--C--------C-------CCCCC-CC
Q 008146 363 L-G---------GFVACRA----------LSQ------------------RNN--D--------P-------TKASR-PW 386 (576)
Q Consensus 363 ~-~---------~~~~~~~----------ls~------------------~~~--~--------p-------~~~~r-pf 386 (576)
+ . .+..++. +++ .+. . | +...| ++
T Consensus 157 ~~~~~g~~~~~~~~~amg~~a~~~~~~yg~~re~~~~~a~~s~~~a~~A~~n~~~a~~~~p~~~p~~~~~~~d~~~r~~~ 236 (406)
T PRK07851 157 WHDPREDGLLPDVYIAMGQTAENVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLPDGTVVSTDDGPRAGT 236 (406)
T ss_pred ccccccccccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCccceeeeecCCCceeCCCCCccCCc
Confidence 0 0 0000000 000 000 0 1 10111 11
Q ss_pred c------------c-----CCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHH
Q 008146 387 D------------I-----NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEK 449 (576)
Q Consensus 387 d------------~-----~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~ 449 (576)
+ . ..|...++||++++||++++.|++.|.+++++|+|++...+. +.+...+...++++
T Consensus 237 t~e~v~~s~~v~~P~~~lt~~d~~~~~DGaaa~vl~s~e~A~~~~~~~~a~I~g~~~~~~~-----~~~~~~~~~~a~~~ 311 (406)
T PRK07851 237 TYEKVSQLKPVFRPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARIVSTGVSGLS-----PEIMGLGPVEASKQ 311 (406)
T ss_pred CHHHHhcCCCccCCCCcEecCcCCccCCceeEEEEccHHHHHHcCCCccEEEEEEEEccCC-----CCccchhHHHHHHH
Confidence 1 0 124555799999999999999999999999999999986442 22334457899999
Q ss_pred HHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcC-CCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCC
Q 008146 450 ALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQ-NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPN 528 (576)
Q Consensus 450 AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~-~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~ 528 (576)
+|+++|++++||||+|.|...+. .|+..+ +.|+- ..++++++.+..+||+.|++|+.+++.++++|++.
T Consensus 312 al~~Agi~~~did~~ei~d~f~~----~~l~~l-e~lg~~~~pvN~~GG~l~~Ghp~gasg~~~~~~~~~qL~~~----- 381 (406)
T PRK07851 312 ALARAGMSIDDIDLVEINEAFAA----QVLPSA-RELGIDEDKLNVSGGAIALGHPFGMTGARITTTLLNNLQTH----- 381 (406)
T ss_pred HHHHhCCCHHHCCeehhhhHHHH----HHHHHH-HHhCCCccccCCCCChHhhcCcHHHHHHHHHHHHHHHHHhc-----
Confidence 99999999999999998876664 333333 23342 13678899999999999999999999999999751
Q ss_pred CCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEeeC
Q 008146 529 INLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 529 ~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~~ 575 (576)
.-++.+++..+-||+-..+|||.+
T Consensus 382 -----------------------~~~~g~~~~~~~gg~g~a~~~e~~ 405 (406)
T PRK07851 382 -----------------------DKTFGLETMCVGGGQGMAMVLERL 405 (406)
T ss_pred -----------------------CCCeEEEEEccccChhhEEEEEec
Confidence 125678888899999999999975
|
|
| >PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.8e-22 Score=210.25 Aligned_cols=272 Identities=18% Similarity=0.217 Sum_probs=194.7
Q ss_pred HHHHHHHHHHHHH-hCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 236 MLYLLTAGKKALA-DGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 236 ~rl~l~aa~eAL~-dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
..|..++++++|+ |+|+++++|| .|++|+.... .......+..++...
T Consensus 28 ~~L~~~~~~~al~~~agl~~~~Id-------~vi~g~~~~~------------------------~~~g~~~ar~~~~~~ 76 (387)
T PRK08947 28 EDLSAHLMRSLLARNPALDPAEID-------DIIWGCVQQT------------------------LEQGFNIARNAALLA 76 (387)
T ss_pred HHHHHHHHHHHHHhccCcChHHhC-------eEEEEecccc------------------------ccccccHHHHHHHHc
Confidence 5688899999999 4899998777 6888864310 000122355677888
Q ss_pred CCC--CccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhh-------------------hHHHHHhhhhh
Q 008146 315 GWM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG-------------------LGGFVACRALS 373 (576)
Q Consensus 315 gl~--Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~-------------------~~~~~~~~~ls 373 (576)
|+. -|.++|+++|+||+.|+..|+++|++|++|++||||+|.+..... ..++...+.+.
T Consensus 77 Gl~~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~d~vlv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 156 (387)
T PRK08947 77 GIPHSVPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHMGHVPMNHGVDFHPGLSKNVAKAAGMMGLTAEMLGK 156 (387)
T ss_pred CCCCCCcceeeechhHHHHHHHHHHHHHHHCCCCCEEEEccccccccCccccccCcchhhhhhccccchHHHHHHHHHHH
Confidence 885 378999999999999999999999999999999999998753210 00000000000
Q ss_pred cc--------------------C------------------------CCCCCCCC------------C-Ccc------CC
Q 008146 374 QR--------------------N------------------------NDPTKASR------------P-WDI------NR 390 (576)
Q Consensus 374 ~~--------------------~------------------------~~p~~~~r------------p-fd~------~~ 390 (576)
.. + .+|+...| | |+. ..
T Consensus 157 ~ygisre~~~~~avksh~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~~ 236 (387)
T PRK08947 157 MHGISREQQDAFAARSHQRAWAATQEGRFKNEIIPTEGHDADGVLKLFDYDEVIRPETTVEALAALRPAFDPVNGTVTAG 236 (387)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeeeecCCCCCceeecCCCCCcCCCCHHHHhcCCceeeCCCCcEEcc
Confidence 00 0 01222222 1 221 23
Q ss_pred CcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q 008146 391 DGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATS 470 (576)
Q Consensus 391 ~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtg 470 (576)
|...++||++++||++++.|++.+.+++++|+|++.+.+..+. ...+...+++++|+++|++|+|||++|+|+.+
T Consensus 237 ~~~~~sDGAaAvvl~s~~~A~~~g~~p~~~I~g~~~~~~~~~~-----~~~~~~~a~~~al~~Agl~~~DId~~El~d~F 311 (387)
T PRK08947 237 TSSALSDGASAMLVMSESRAKELGLKPRARIRSMAVAGCDPSI-----MGYGPVPATQKALKRAGLSISDIDVFELNEAF 311 (387)
T ss_pred ccCCcCCceEEEEEccHHHHHHCCCCccEEEEEEEEcCcCccc-----ccccHHHHHHHHHHHcCCCHHHCCEEEecccc
Confidence 4556799999999999999999999999999999987432221 12235789999999999999999999999988
Q ss_pred CccCcHHHHHHHHHH-HcCC--CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCc
Q 008146 471 TPAGDIKEYQALIHC-FGQN--RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPK 547 (576)
Q Consensus 471 t~~gD~~E~~Al~~~-f~~~--~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~ 547 (576)
+. .|+..++.. |... .++++.+..-.+|||.||+|+.+++.++.+|+.
T Consensus 312 ~~----~~l~~~e~lg~~~~~~~~vN~~GG~la~GhP~GAtG~~~v~~l~~~L~~------------------------- 362 (387)
T PRK08947 312 AA----QSLPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMER------------------------- 362 (387)
T ss_pred hH----HHHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHh-------------------------
Confidence 85 455554433 2122 356677777778999999999999999999975
Q ss_pred ccccCccEEEEeccCCCcceeEEEEeeC
Q 008146 548 KERLEVKAALSNSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 548 ~~~~~~~~alv~sfG~gG~na~vil~~~ 575 (576)
...++++.++.|-||.-..+||+.+
T Consensus 363 ---~~~~~gl~~~~~g~G~g~a~~~e~~ 387 (387)
T PRK08947 363 ---KDAQFGLATMCIGLGQGIATVFERV 387 (387)
T ss_pred ---cCCCEEEEEEeecccceeEEEEEeC
Confidence 1246788888887888788888763
|
|
| >PLN02644 acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.90 E-value=7e-22 Score=210.36 Aligned_cols=270 Identities=21% Similarity=0.257 Sum_probs=192.6
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
..|+.+++++||+|||+++++|| +|++|+..... .....+..++..+|
T Consensus 26 ~~L~~~a~~~al~dAgl~~~~ID-------~vv~g~~~~~~-------------------------~~~~~~~~~~~~~G 73 (394)
T PLN02644 26 TELGSIAIQAALERAGVDPALVQ-------EVFFGNVLSAN-------------------------LGQAPARQAALGAG 73 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCcCC-------------------------cCCcHHHHHHHhcC
Confidence 67899999999999999998777 78888643100 01113445778889
Q ss_pred CC--CccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchh----------------h---------------
Q 008146 316 WM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI----------------G--------------- 362 (576)
Q Consensus 316 l~--Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~----------------~--------------- 362 (576)
+. -|.++|+++|+|++.||..|+++|++|++|++||+|+|.+.... .
T Consensus 74 l~~~~p~~~v~~~caSg~~av~~Aa~~I~sG~~d~vlv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (394)
T PLN02644 74 LPPSTICTTVNKVCASGMKAVMLAAQSIQLGINDVVVAGGMESMSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYND 153 (394)
T ss_pred CCCCCceEEEeccchHHHHHHHHHHHHHHcCCCCEEEEEeEEecCCCcccccccccccccccchhhhhccccccccccCC
Confidence 85 37889999999999999999999999999999999998763210 0
Q ss_pred -hHHHHHhhhhhcc--------------------CCCCCCC-------------CCC-----------------------
Q 008146 363 -LGGFVACRALSQR--------------------NNDPTKA-------------SRP----------------------- 385 (576)
Q Consensus 363 -~~~~~~~~~ls~~--------------------~~~p~~~-------------~rp----------------------- 385 (576)
.........+... +..|... .+|
T Consensus 154 ~~~~~~A~~~~~~yG~tre~la~vav~s~~~a~~a~~~~~~~~ei~~~~v~~~~~~~~~~~~~de~~~~~~~~~l~~l~p 233 (394)
T PLN02644 154 FGMGVCAELCADQYSISREEQDAYAIQSYERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVDKDEGLGKFDPAKLRKLRP 233 (394)
T ss_pred CcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCccceeeEEeccCCCCCceEeecCCCcCCCCHHHHhCCCC
Confidence 0000000000000 0001000 000
Q ss_pred -Cc------cCCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCC
Q 008146 386 -WD------INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSR 458 (576)
Q Consensus 386 -fd------~~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~ 458 (576)
|. ...|...++||++++||++++.|++++.+++++|+|++..++.... .......+++++|+++|+++
T Consensus 234 ~f~~~~g~vt~~~~~~~~DGaaavvl~s~~~A~~~~~~~~a~I~g~~~~~~~~~~-----~~~~~~~a~~~al~~Agi~~ 308 (394)
T PLN02644 234 SFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAPEL-----FTTAPALAIPKALKHAGLEA 308 (394)
T ss_pred cccCCCCcEeccccCCCCcceEEEEeccHHHHHHCCCCeEEEEEEEEEcCCCCcc-----cchhHHHHHHHHHHHcCCCH
Confidence 11 0123556799999999999999999999999999999987653211 12233579999999999999
Q ss_pred CCccEEEecCCCCccCcHHHHHHHHHHHcC-CCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCC
Q 008146 459 EDVNYINAHATSTPAGDIKEYQALIHCFGQ-NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAV 537 (576)
Q Consensus 459 ~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~-~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~ 537 (576)
+||||+|+|+.++. ......+.||- ..++++++.+..+||+.||+|+.++++++++|+..
T Consensus 309 ~Did~~Ei~d~f~~-----~~l~~~e~lg~~~~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~~~-------------- 369 (394)
T PLN02644 309 SQVDYYEINEAFSV-----VALANQKLLGLDPEKVNVHGGAVSLGHPIGCSGARILVTLLGVLRSK-------------- 369 (394)
T ss_pred HHCCEEEeCcHHHH-----HHHHHHHHhCCCccccCCCCChHhhCCCHHHHHHHHHHHHHHHHHhc--------------
Confidence 99999998766542 22333456663 24678888888999999999999999999999862
Q ss_pred CCcccccCCcccccCccEEEEeccCCCcceeEEEEeeC
Q 008146 538 VDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~~ 575 (576)
..++.+.+..+-||....+|||.-
T Consensus 370 --------------~~~~g~~~~~~~gg~g~a~~~e~~ 393 (394)
T PLN02644 370 --------------NGKYGVAGICNGGGGASAIVVELM 393 (394)
T ss_pred --------------CCCeEEEEEeccCCceeEEEEEec
Confidence 124677777888899999999864
|
|
| >TIGR02445 fadA fatty oxidation complex, beta subunit FadA | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.9e-22 Score=208.55 Aligned_cols=271 Identities=19% Similarity=0.203 Sum_probs=192.3
Q ss_pred HHHHHHHHHHHHHh-CCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 236 MLYLLTAGKKALAD-GGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 236 ~rl~l~aa~eAL~d-AGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
..|+.++.+++|++ +|+++++|| .|++|+..... .....++..++...
T Consensus 26 ~~L~~~a~~~al~~~agl~~~~Id-------~v~~G~~~~~~------------------------~~g~~~ar~~~~~~ 74 (385)
T TIGR02445 26 EDLSAHLMSKLLARNPKVDPAEVE-------DIYWGCVQQTL------------------------EQGFNIARNAALLA 74 (385)
T ss_pred HHHHHHHHHHHHHhccCCCHHHcC-------EEEEecccccc------------------------cccchHHHHHHHHC
Confidence 67899999999995 699998777 69999753100 00112455566566
Q ss_pred CCC--CccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhh-------------------hHHHHHhhhhh
Q 008146 315 GWM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG-------------------LGGFVACRALS 373 (576)
Q Consensus 315 gl~--Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~-------------------~~~~~~~~~ls 373 (576)
|+. -|+++|+++|+||+.|++.|+++|++|++|++||||+|.+..... ..++.....+.
T Consensus 75 g~~~~~p~~tV~~~CaSG~~Ai~~Aa~~I~sG~~d~vlagG~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 154 (385)
T TIGR02445 75 QIPHTSAAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMGHVPMMHGVDFHPGMSLHVAKAAGMMGLTAEMLGK 154 (385)
T ss_pred CCCCCcchhhhhhhhHHHHHHHHHHHHHHHCCCCCEEEEeeehhcccCccccCCCcchhHHhhhccccchHHHHHHHHHH
Confidence 764 478999999999999999999999999999999999998753210 00000000000
Q ss_pred cc----------------------------C----------------CCCCCCCCC-------------Ccc------CC
Q 008146 374 QR----------------------------N----------------NDPTKASRP-------------WDI------NR 390 (576)
Q Consensus 374 ~~----------------------------~----------------~~p~~~~rp-------------fd~------~~ 390 (576)
.. + .+|+...|+ |+. ..
T Consensus 155 ~ygitre~~d~~A~~sh~~a~~a~~~g~f~nei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~~ 234 (385)
T TIGR02445 155 MHGISREQQDAFAARSHARAHAATQEGKFKNEIIPTQGHDADGFLKQFDYDEVIRPETTVESLAALRPAFDPKNGTVTAG 234 (385)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeeeeccCCCCceeeCCCCCCCCCCCHHHHhcCCceecCCCCceecc
Confidence 00 0 013333321 221 13
Q ss_pred CcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q 008146 391 DGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATS 470 (576)
Q Consensus 391 ~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtg 470 (576)
|...++||++++||++++.|++++++++++|+|++.+.... ...+.+...+++++|+++|++|+||||+|+|..+
T Consensus 235 ~~~~~sDGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~~-----~~~~~~~~~a~~~al~~AGi~p~DId~~Ei~daF 309 (385)
T TIGR02445 235 TSSALSDGASAMLVMSEQRANELGLKPRARIRSMAVAGCDP-----SIMGYGPVPATQKALKRAGLSISDIDVFELNEAF 309 (385)
T ss_pred cCCCcCCceEEEEEecHHHHHHCCCCeeEEEEEEEEcCCCC-----cccchhHHHHHHHHHHHcCCCHHHcCEEEEcccc
Confidence 45557999999999999999999999999999999874322 1122355789999999999999999999999988
Q ss_pred CccCcHHHHHHHHHHHc--CC--CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCC
Q 008146 471 TPAGDIKEYQALIHCFG--QN--RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGP 546 (576)
Q Consensus 471 t~~gD~~E~~Al~~~f~--~~--~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~ 546 (576)
+. .|+..++.. + .. .++++.+..-.+|||.||+|+..++.+++.|++
T Consensus 310 a~----~~l~~~e~l-g~~~~g~~~vN~~GG~la~GhP~GATG~r~v~~l~~~l~~------------------------ 360 (385)
T TIGR02445 310 AA----QALPCLKDL-GLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMEQ------------------------ 360 (385)
T ss_pred HH----HHHHHHHHc-CCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHh------------------------
Confidence 85 455444433 3 22 356666666667999999999988888855543
Q ss_pred cccccCccEEEEeccCCCcceeEEEEeeC
Q 008146 547 KKERLEVKAALSNSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 547 ~~~~~~~~~alv~sfG~gG~na~vil~~~ 575 (576)
...++++.++.+-||.-..+|||.+
T Consensus 361 ----~~~~~Gl~~~~~g~g~g~a~~~e~~ 385 (385)
T TIGR02445 361 ----KDATFGLATMCIGLGQGIATVFERV 385 (385)
T ss_pred ----cCCCeEEEEEecccChhheEEEEeC
Confidence 0245688888888999999999864
|
This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli. |
| >PRK07850 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.1e-22 Score=208.98 Aligned_cols=271 Identities=16% Similarity=0.160 Sum_probs=194.6
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
..|+.++++++|+|+|+++++|+ .|++|+.... +.....++..++...|
T Consensus 27 ~eL~~~a~~~aL~~agi~~~~Id-------~v~~G~~~~~------------------------~~q~~~~ar~~~l~~G 75 (387)
T PRK07850 27 AELLGAVQRAVLDRAGIDPGDVE-------QVIGGCVTQA------------------------GEQSNNITRTAWLHAG 75 (387)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccc------------------------ccccchHHHHHHHhCC
Confidence 56889999999999999998777 5888875310 0001224456667788
Q ss_pred CC--CccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchh-hh---------------HHHHHhh-----hh
Q 008146 316 WM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI-GL---------------GGFVACR-----AL 372 (576)
Q Consensus 316 l~--Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~-~~---------------~~~~~~~-----~l 372 (576)
+. -|.++|+++|+||+.|++.|++.|++|++|++||+|+|+|.... .. ..+..+. .+
T Consensus 76 l~~~~p~~tV~~~CaSG~~A~~~A~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~~ 155 (387)
T PRK07850 76 LPYHVGATTIDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSRVPLGANAGPGRGLPRPDSWDIDMPNQFEAAERIA 155 (387)
T ss_pred CCCCCceEEEecccccHHHHHHHHHHHHHCCCCCEEEEEeEecCCCCcccccccccccCccccccccCcchHHHHHHHHH
Confidence 85 48999999999999999999999999999999999999875421 00 0000000 00
Q ss_pred hcc----------------CC-------------------------CCCCC---------------------CCCCcc--
Q 008146 373 SQR----------------NN-------------------------DPTKA---------------------SRPWDI-- 388 (576)
Q Consensus 373 s~~----------------~~-------------------------~p~~~---------------------~rpfd~-- 388 (576)
.+. +. +|.+. ...|..
T Consensus 156 ~~ygisre~~d~~a~~sh~~a~~A~~~g~f~~ei~pv~~~~~~~~~np~~~~~~~~~D~~~r~~t~e~l~~l~p~~~~~~ 235 (387)
T PRK07850 156 KRRGITREDVDAFGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGETRLVTRDQGLRDTTMEGLAGLKPVLEGGI 235 (387)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEeecccccccccCCCceEeecCCCcccCCHHHhccCCCCCCCCC
Confidence 000 00 11111 112311
Q ss_pred --CCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEe
Q 008146 389 --NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINA 466 (576)
Q Consensus 389 --~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~ 466 (576)
..|...++||++++||.+++.|++.+.++.++|.|++..... +.....+...+++++|+++|++++|||++|+
T Consensus 236 ~t~~~~~~~sDGAaa~vl~see~A~~l~~~p~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~~did~~ei 310 (387)
T PRK07850 236 HTAGTSSQISDGAAAVLWMDEDRARALGLRPRARIVAQALVGAE-----PYYHLDGPVQATAKVLEKAGMKIGDIDLVEI 310 (387)
T ss_pred ccchhcCCcCCceEEEEEecHHHHHHcCCCCcEEEEEEEEeccC-----chhhcchHHHHHHHHHHHcCCCHHHcCeeee
Confidence 124456789999999999999999998888999999865322 1122345678999999999999999999999
Q ss_pred cCCCCccCcHHHHHHHHHHHcCC-CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccC
Q 008146 467 HATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVG 545 (576)
Q Consensus 467 Hgtgt~~gD~~E~~Al~~~f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~ 545 (576)
|..++. .|+..+ +.++-. .++++.+..-.+||+.||+|+..++.++.||+.+
T Consensus 311 ~d~F~~----~~l~~~-e~lg~~~~pvN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~---------------------- 363 (387)
T PRK07850 311 NEAFAS----VVLSWA-QVHEPDMDKVNVNGGAIALGHPVGSTGARLITTALHELERT---------------------- 363 (387)
T ss_pred cccchH----HHHHHH-HHcCCCCCCcCCCCchhhcCCCcchhHHHHHHHHHHHHHhc----------------------
Confidence 998885 344433 344422 3567777777789999999999999999999751
Q ss_pred CcccccCccEEEEeccCCCcceeEEEEeeC
Q 008146 546 PKKERLEVKAALSNSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 546 ~~~~~~~~~~alv~sfG~gG~na~vil~~~ 575 (576)
..++++++..+-||.-..+|||.+
T Consensus 364 ------~~~~g~~~~c~~gg~g~a~~~e~~ 387 (387)
T PRK07850 364 ------DKSTALITMCAGGALSTGTIIERI 387 (387)
T ss_pred ------CCCeEEEEEccccCceeEEEEEeC
Confidence 235677777888899999999864
|
|
| >cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.9e-22 Score=209.92 Aligned_cols=250 Identities=24% Similarity=0.303 Sum_probs=181.0
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
...|+.+++++||+|+|+++++|+ ++++|+..... .....+..++..+
T Consensus 16 ~~eL~~~A~~~Al~dagl~~~~Id-------~vi~g~~~~~~-------------------------~~~~~a~~va~~l 63 (375)
T cd00829 16 PLELAAEAARAALDDAGLEPADID-------AVVVGNAAGGR-------------------------FQSFPGALIAEYL 63 (375)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEecccccc-------------------------cccchHHHHHHHc
Confidence 467899999999999999987666 68888653211 0123567899999
Q ss_pred CCC-CccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhh------------------h--------HHHH
Q 008146 315 GWM-GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG------------------L--------GGFV 367 (576)
Q Consensus 315 gl~-Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~------------------~--------~~~~ 367 (576)
|+. .|.++|+.+|+|++.+|..|+++|++|++|++||+|+|.+..... + .++.
T Consensus 64 Gl~~~~~~~v~~~c~sg~~al~~Aa~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 143 (375)
T cd00829 64 GLLGKPATRVEAAGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALA 143 (375)
T ss_pred CCCCcceeeEeCccHHHHHHHHHHHHHHHhCCCCEEEEEEEeecccCcccchhhccccchhhhhcccccCCChHHHHHHH
Confidence 994 589999999999999999999999999999999999997643210 0 0000
Q ss_pred HhhhhhccC------------------CCCCCC----------------CCCCccCCCcceecCceEEEEEcchHHHHhc
Q 008146 368 ACRALSQRN------------------NDPTKA----------------SRPWDINRDGFVMGEGAGVLLLEELEHAKKR 413 (576)
Q Consensus 368 ~~~~ls~~~------------------~~p~~~----------------~rpfd~~~~G~v~gEGAaalvL~~~~~A~~~ 413 (576)
....+...+ .+|... +.|+. ..|...++||++++||++++.|++.
T Consensus 144 a~~~~~~~g~t~e~~~~va~~~~~~A~~np~A~~~~~~t~d~~~~~~~i~~pl~-~~~~~~~~DGaaa~vl~s~~~a~~~ 222 (375)
T cd00829 144 ARRYMHRYGTTREDLAKVAVKNHRNAARNPYAQFRKPITVEDVLNSRMIADPLR-LLDCCPVSDGAAAVVLASEERAREL 222 (375)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCCc-hhhcCCCCCceeEEEEecHHHHhhc
Confidence 000000000 011111 11222 1455678999999999999999988
Q ss_pred CCeeeEEEEEEEEecCCCCCCCCCC--ChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHH-HcCC-
Q 008146 414 GAKIYAEFRGGSFTSDAYHMTEPHP--DGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHC-FGQN- 489 (576)
Q Consensus 414 g~~i~a~I~g~~~~~dg~~~~~~~p--~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~-f~~~- 489 (576)
.+++++|+|++..++..+...... ...+...+++++|+++|++++|||++|+|++++. .+...++.. |...
T Consensus 223 -~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~ei~d~F~~----~~l~~~e~lGl~~~g 297 (375)
T cd00829 223 -TDRPVWILGVGAASDTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVAELYDCFTI----AELLALEDLGFCEKG 297 (375)
T ss_pred -CCCCeEEEEEEEecCCccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcChH----HHHHHHHHcCCCCCC
Confidence 678899999999988776544332 5677889999999999999999999999999996 333333322 1111
Q ss_pred --------------CCccccccccc--ccccccchhHHHHHHHHHHHHc
Q 008146 490 --------------RGLRVNSTKSM--IGHLLGAAGAVEAIAVVQAIRT 522 (576)
Q Consensus 490 --------------~~~~v~s~K~~--iGH~~gAsG~~~li~~~l~L~~ 522 (576)
..++|+...+. .||+.|++|+..++.++++|+.
T Consensus 298 ~~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qlrg 346 (375)
T cd00829 298 EGGKLVREGDTAIGGDLPVNTSGGLLSKGHPLGATGLAQAVEAVRQLRG 346 (375)
T ss_pred chHHHHHCCCccCCCCccccCCCchhcCCCCccHHHHHHHHHHHHHhcC
Confidence 12355555554 5999999999999999999986
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. |
| >PRK06954 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.3e-22 Score=212.11 Aligned_cols=269 Identities=17% Similarity=0.234 Sum_probs=190.3
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
..|+.+++++||+|+|+++++|+ .|++|+...... ........+..+|
T Consensus 32 ~eL~~~a~~~aL~~Agi~~~dID-------~vi~G~~~~~~~-------------------------~~~~~~~~~l~ag 79 (397)
T PRK06954 32 PQLGAAAIAAAVERAGLKPEQID-------EVVMGCVLPAGQ-------------------------GQAPARQAALGAG 79 (397)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC-------EEEEEecCCCcc-------------------------chHHHHHHHHcCC
Confidence 56899999999999999998777 688987542110 1112333444455
Q ss_pred C--CCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccc-hhh---------------hH---------HHHH
Q 008146 316 W--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PIG---------------LG---------GFVA 368 (576)
Q Consensus 316 l--~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~-p~~---------------~~---------~~~~ 368 (576)
+ +-|+++|+++|+||+.|+..|+++|++|++|++||+|+|.+.. |.. .. .+..
T Consensus 80 ~~~~~p~~~V~~aCaSG~~Av~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (397)
T PRK06954 80 LPLSVGCTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMESMTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYDK 159 (397)
T ss_pred CCCCccEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEeeeccCCCcccCcccccccccCcchhhhhhccccccccccc
Confidence 5 3588999999999999999999999999999999999998752 210 00 0000
Q ss_pred --------hhhhhccCC-------------------CCCCCC----CCCc------------------------------
Q 008146 369 --------CRALSQRNN-------------------DPTKAS----RPWD------------------------------ 387 (576)
Q Consensus 369 --------~~~ls~~~~-------------------~p~~~~----rpfd------------------------------ 387 (576)
...+...+. .|.+.. .|++
T Consensus 160 ~~~~~~~a~~~~~~ygitre~~d~~A~~s~~~a~~a~~~~~~~~~~~pv~v~~~~~~~~v~~D~~pr~~~~~~l~~l~~~ 239 (397)
T PRK06954 160 GRLMGTFAEECAGEYGFTREAQDAFAIESLARAKRANEDGSFAWEIAPVTVAGKKGDTVIDRDEQPFKANPEKIPTLKPA 239 (397)
T ss_pred CCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEEeccCCCCeEeccCCCcCCCCHHHHhCCCCc
Confidence 000000000 011111 0111
Q ss_pred --c-----CCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 008146 388 --I-----NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 460 (576)
Q Consensus 388 --~-----~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~d 460 (576)
. ..|...++||++++||++++.|+++|.+++++|.|++...+. +.....+...+++++|+++|++++|
T Consensus 240 f~~~g~lt~~~~~~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~~D 314 (397)
T PRK06954 240 FSKTGTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQA-----PSKFTTAPVGAIRKLFEKNGWRAAE 314 (397)
T ss_pred cCCCCcEEccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccC-----cccccchHHHHHHHHHHHcCCCHHH
Confidence 0 012344699999999999999999999999999998764322 1112235578999999999999999
Q ss_pred ccEEEecCCCCccCcHHHHHHHHHHHc-CCCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCC
Q 008146 461 VNYINAHATSTPAGDIKEYQALIHCFG-QNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD 539 (576)
Q Consensus 461 Id~ve~Hgtgt~~gD~~E~~Al~~~f~-~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~ 539 (576)
||++|+|..++. .|+..++.. | ...++++++.+..+||+.||+|+.+++.++++|+..
T Consensus 315 id~~ei~d~fa~----~~l~~~e~l-g~~~~~vN~~GG~~a~Ghp~gasG~~~~~~~~~qL~~~---------------- 373 (397)
T PRK06954 315 VDLFEINEAFAV----VTMAAMKEH-GLPHEKVNVNGGACALGHPIGASGARILVTLIGALRAR---------------- 373 (397)
T ss_pred CCEEehhhHHHH----HHHHHHHHh-CCCcccCCcCCChHHhcccHHHHHHHHHHHHHHHHHhc----------------
Confidence 999999988775 455555444 3 234688999999999999999999999999999851
Q ss_pred cccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 540 TNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 540 ~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
..++.+.+..+-||.-..+|||.
T Consensus 374 ------------~g~~~v~~~c~~gg~g~a~~~e~ 396 (397)
T PRK06954 374 ------------GGKRGVASLCIGGGEATAMGIEL 396 (397)
T ss_pred ------------CCCeEEEEEccccchhhEEEEEe
Confidence 12345667778888999999985
|
|
| >PRK08235 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.6e-22 Score=209.76 Aligned_cols=269 Identities=19% Similarity=0.226 Sum_probs=193.0
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
..|+.+++++||+|+|+++++|| .|++|+..... . ...++..++..+|
T Consensus 27 ~eLa~~A~~~aL~~agl~~~dID-------~vi~g~~~~~~------------------------~-~~~~~~~~~~~~G 74 (393)
T PRK08235 27 TELGGIAIKEALERANVSAEDVE-------EVIMGTVLQGG------------------------Q-GQIPSRQAARAAG 74 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccCC------------------------C-CCCHHHHHHHHcC
Confidence 56899999999999999998777 68998754210 0 1123445678889
Q ss_pred CC--CccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhh---------------------HH----HH-
Q 008146 316 WM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGL---------------------GG----FV- 367 (576)
Q Consensus 316 l~--Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~---------------------~~----~~- 367 (576)
+. -|.++|+++|+||+.||+.|+++|++|++|++||+|+|.+...... .. +.
T Consensus 75 l~~~~p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLvvG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (393)
T PRK08235 75 IPWEVQTETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNAPYILPGARWGYRMGDNEVIDLMVADGLTCAFSG 154 (393)
T ss_pred CCCCcceeehhhhhhHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccccccccCCchhhhhhcccccccccCC
Confidence 84 4899999999999999999999999999999999999987542100 00 00
Q ss_pred -Hhhhhh-----cc--------------------C------------------------CCCCCCCCC------------
Q 008146 368 -ACRALS-----QR--------------------N------------------------NDPTKASRP------------ 385 (576)
Q Consensus 368 -~~~~ls-----~~--------------------~------------------------~~p~~~~rp------------ 385 (576)
.++.+. +. + .+|+...|+
T Consensus 155 ~~~~~~A~~~~~~ygitre~~d~~avksh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~ 234 (393)
T PRK08235 155 VHMGVYGGEVAKELGISREAQDEWAYRSHQRAVSAHEEGRFEEEIVPVTIPQRKGDPIVVAKDEAPRKDTTIEKLAKLKP 234 (393)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeeEecCCCCCceEeCCCCCCCCCCCHHHHhcCCC
Confidence 000000 00 0 013332321
Q ss_pred -Ccc-----CCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 008146 386 -WDI-----NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRE 459 (576)
Q Consensus 386 -fd~-----~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~ 459 (576)
|+. ..|...++||++++||++++.|++.+.+++++|.|++...+.... ...+...+++++|+++|++++
T Consensus 235 v~~p~g~lt~~~~~~~~DGAaa~vl~s~~~A~~~~~~p~~~i~g~~~~~~~~~~-----~~~~~~~a~~~al~~agl~~~ 309 (393)
T PRK08235 235 VFDKTGTITAGNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKD-----FPRTPGYAINALLEKTGKTVE 309 (393)
T ss_pred cccCCCcEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccChhh-----hcchHHHHHHHHHHHhCCCHH
Confidence 111 124445799999999999999999999999999998765432211 122346899999999999999
Q ss_pred CccEEEecCCCCccCcHHHHHHHHHHHcC-CCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCC
Q 008146 460 DVNYINAHATSTPAGDIKEYQALIHCFGQ-NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVV 538 (576)
Q Consensus 460 dId~ve~Hgtgt~~gD~~E~~Al~~~f~~-~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~ 538 (576)
|||++|+|...+. .|+ +..+.|+- ..++++++.+..+||+.||+|+.+++.++.+|+..
T Consensus 310 did~~e~~d~f~~----~~l-~~~e~lg~~~~pvN~~GG~la~Ghp~gasG~~~~~~l~~qL~~~--------------- 369 (393)
T PRK08235 310 DIDLFEINEAFAA----VAL-ASTEIAGIDPEKVNVNGGAVALGHPIGASGARIIVTLIHELKRR--------------- 369 (393)
T ss_pred HCCeehhcchhHH----HHH-HHHHHhCCCcccCCcCCchHHhCCcHHHHHHHHHHHHHHHHHhc---------------
Confidence 9999998876663 222 23345553 24688899999999999999999999999999851
Q ss_pred CcccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 539 DTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 539 ~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
..++.+.+...-||.-..+|||.
T Consensus 370 -------------~~~~g~~~~c~~gG~g~a~~~e~ 392 (393)
T PRK08235 370 -------------GGGIGIAAICSGGGQGDAVLIEV 392 (393)
T ss_pred -------------CCCeEEEEEcccccceEEEEEEe
Confidence 12346666777888999999885
|
|
| >PRK09050 beta-ketoadipyl CoA thiolase; Validated | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.1e-22 Score=209.22 Aligned_cols=269 Identities=22% Similarity=0.238 Sum_probs=195.7
Q ss_pred HHHHHHHHHHHHH-hCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 236 MLYLLTAGKKALA-DGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 236 ~rl~l~aa~eAL~-dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
..|+.++.+++|+ |+|+++++|| .|++|+.... +......+..++...
T Consensus 27 ~~L~~~a~~~al~~~agi~~~~Id-------~v~~G~~~~~------------------------~~~~~~~ar~~~~~~ 75 (401)
T PRK09050 27 DDLGAVPLKALMARNPGVDWEAVD-------DVIYGCANQA------------------------GEDNRNVARMSALLA 75 (401)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCC-------EEEEEecccc------------------------ccccchHHHHHHHHc
Confidence 5688999999999 6899998777 5899975311 111133566688899
Q ss_pred CCC--CccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhh--------h---------------------
Q 008146 315 GWM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG--------L--------------------- 363 (576)
Q Consensus 315 gl~--Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~--------~--------------------- 363 (576)
|+. -|.++|+++|+||+.|++.|+++|++|++|++||+|+|.+..... +
T Consensus 76 Gl~~~vP~~tV~~aCaSG~~Ai~~A~~~I~sG~~dvvlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (401)
T PRK09050 76 GLPVSVPGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMSRAPFVMGKADSAFSRQAEIFDTTIGWRFVNPLMK 155 (401)
T ss_pred CCCCCCceEEEecccccHHHHHHHHHHHHHCCCCCEEEEecccccccCcccccchhhhcccCcccccccccccccCCccc
Confidence 993 499999999999999999999999999999999999998754220 0
Q ss_pred HHHH-------------Hhh----------hhhcc-------CC---------------------CCCCCCC--------
Q 008146 364 GGFV-------------ACR----------ALSQR-------NN---------------------DPTKASR-------- 384 (576)
Q Consensus 364 ~~~~-------------~~~----------~ls~~-------~~---------------------~p~~~~r-------- 384 (576)
..|. +.+ ..|.. +. +|+...|
T Consensus 156 ~~~~~~~Mg~~ae~~a~~~gisre~~D~~A~~S~k~a~~A~~ng~~~~ei~p~~~~~~~~~~~~~~~da~~r~~~t~e~l 235 (401)
T PRK09050 156 AQYGVDSMPETAENVAEDYNISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQKKGDPVVVDRDEHPRPETTLEAL 235 (401)
T ss_pred cccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeeccCCCCceeeCCCCCCCCCCCHHHH
Confidence 0000 000 00000 10 1222222
Q ss_pred ----C-Ccc-----CCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHc
Q 008146 385 ----P-WDI-----NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHS 454 (576)
Q Consensus 385 ----p-fd~-----~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~A 454 (576)
| |+. -.|...++||++++||++++.|+++|.+++++|+|++...+.. ...+.+...+++++|+++
T Consensus 236 ~~l~~~~~~~g~lt~~n~s~~~DGAaa~vl~s~~~A~~lg~~p~a~I~g~~~~~~~~-----~~~~~~~~~a~~~al~~A 310 (401)
T PRK09050 236 AKLKPVFRPDGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARILGMATAGVEP-----RIMGIGPAPATRKLLARL 310 (401)
T ss_pred hcCCCcccCCCEEeCCCcCCCcCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCC-----ccccchHHHHHHHHHHHc
Confidence 1 321 1244457999999999999999999999999999999875422 223345678999999999
Q ss_pred CCCCCCccEEEecCCCCccCcHHHHHHH--HHHHcCC-CCccccccccc--ccccccchhHHHHHHHHHHHHcCCCCCCC
Q 008146 455 GVSREDVNYINAHATSTPAGDIKEYQAL--IHCFGQN-RGLRVNSTKSM--IGHLLGAAGAVEAIAVVQAIRTGWIHPNI 529 (576)
Q Consensus 455 gl~~~dId~ve~Hgtgt~~gD~~E~~Al--~~~f~~~-~~~~v~s~K~~--iGH~~gAsG~~~li~~~l~L~~g~ipp~~ 529 (576)
|++++|||++|.|+. .+...+ .+.|+-. ...+++..++. +||+.||+|+..++.++.+|+..
T Consensus 311 gl~~~DId~~ei~D~-------f~~~~l~~~e~lg~~~~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~qLr~~------ 377 (401)
T PRK09050 311 GLTIDQFDVIELNEA-------FAAQGLAVLRQLGLADDDARVNPNGGAIALGHPLGMSGARLVLTALHQLERT------ 377 (401)
T ss_pred CCCHHHCCccccCcH-------hHHHHHHHHHHcCCCCCCCCEeCCCchHhcCCchhHHHHHHHHHHHHHHHhc------
Confidence 999999999996644 444333 3456532 23678888886 79999999999999999999851
Q ss_pred CCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEeeC
Q 008146 530 NLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 530 ~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~~ 575 (576)
..++++++...-||.-..+|||.+
T Consensus 378 ----------------------~~~~g~~~~c~~gG~g~a~~~e~~ 401 (401)
T PRK09050 378 ----------------------GGRYALCTMCIGVGQGIALAIERV 401 (401)
T ss_pred ----------------------CCCeEEEEEcccccceeEEEEEeC
Confidence 235677788888999999999863
|
|
| >PRK08131 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.1e-22 Score=214.03 Aligned_cols=271 Identities=20% Similarity=0.263 Sum_probs=188.6
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
..|+.++.++||+|+|+++++|| .|++|+...+.. .....+..++...|
T Consensus 27 ~eL~~~a~~~al~~agi~~~~Id-------~v~~G~~~~~~~------------------------~~~~~ar~~~~~~G 75 (401)
T PRK08131 27 DDLAATVIRRLLEKSGFPGDDIE-------DVILGCTNQAGE------------------------DSRNVARNALLLAG 75 (401)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccccc------------------------ccccHHHHHHHhcC
Confidence 56899999999999999998777 699997532110 01123455777888
Q ss_pred CC--CccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhh---------------hHH-------------
Q 008146 316 WM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG---------------LGG------------- 365 (576)
Q Consensus 316 l~--Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~---------------~~~------------- 365 (576)
+. -|.++|+++|+||+.|++.|+++|++|++|++||||+|.+..... +..
T Consensus 76 lp~~~p~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvlagG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (401)
T PRK08131 76 LPVTVPGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSRAPFVMGKAESAFSRDAKVFDTTIGARFPNPKIVA 155 (401)
T ss_pred CCCCCceeeeechhhhHHHHHHHHHHHHHCCCCCEEEEEEecCCCCCcccccccccccccCcchhhhhhcccccCccccc
Confidence 85 599999999999999999999999999999999999998753211 000
Q ss_pred -HHH--hhh-----hhccCC-------------------CCCC-C---CCCCcc--------------------------
Q 008146 366 -FVA--CRA-----LSQRNN-------------------DPTK-A---SRPWDI-------------------------- 388 (576)
Q Consensus 366 -~~~--~~~-----ls~~~~-------------------~p~~-~---~rpfd~-------------------------- 388 (576)
+.. ++. ....+. .+.+ . ..|.+.
T Consensus 156 ~~a~~~mg~~ae~~~~~ygitre~~d~vA~~S~~~~~~a~~~~~~~~~i~pi~v~~~~~~~~~~v~~De~~r~~~~~e~L 235 (401)
T PRK08131 156 QYGNDSMPETGDNVAAEFGISREDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGRKLPPKLVAEDEHPRPSSTVEAL 235 (401)
T ss_pred ccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCceeeEEeccccCCCceEEecCCCCCCCCCHHHH
Confidence 000 000 000000 0000 0 001110
Q ss_pred -------------CCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcC
Q 008146 389 -------------NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSG 455 (576)
Q Consensus 389 -------------~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Ag 455 (576)
..|...++|||+++||++++.|++.+.+++++|.|++...+. +...+.+...+++++|+++|
T Consensus 236 ~~l~p~f~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~-----~~~~~~~~~~a~~~a~~~ag 310 (401)
T PRK08131 236 TKLKPLFEGGVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVE-----PRIMGIGPVEAIKKALARAG 310 (401)
T ss_pred hcCCCCCCCCCccCCcCCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEeccC-----CccccchHHHHHHHHHHHcC
Confidence 014555799999999999999999999999999999988652 22233466899999999999
Q ss_pred CCCCCccEEEecCCCCccCcHHHHHHHHHHHcCC-CCcccccccc--cccccccchhHHHHHHHHHHHHcCCCCCCCCCC
Q 008146 456 VSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKS--MIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLE 532 (576)
Q Consensus 456 l~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~-~~~~v~s~K~--~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~ 532 (576)
++++|||++|+|..++. .|+..+ +.+|-. ...+|+..++ .+|||.||+|+.+++.++++|+..-
T Consensus 311 l~~~did~~ei~d~Fa~----~~l~~~-e~lg~~~~~~~vN~~GG~la~GhP~gAtG~~~~~el~~qL~~~~-------- 377 (401)
T PRK08131 311 LTLDDMDIIEINEAFAS----QVLGCL-KGLGVDFDDPRVNPNGGAIAVGHPLGASGARLALTAARELQRRG-------- 377 (401)
T ss_pred CCHHHCCeehhccHHHH----HHHHHH-HHcCCCCCCCCccCCccHHhcCCchhhhHHHHHHHHHHHHHhcC--------
Confidence 99999999999987775 233322 333421 1345666666 4699999999999999999998610
Q ss_pred CCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEeeC
Q 008146 533 NPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 533 ~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~~ 575 (576)
.+++++....-||+...+|||..
T Consensus 378 --------------------~~~~~~~~~~ggg~g~a~i~e~~ 400 (401)
T PRK08131 378 --------------------KRYAVVSLCIGVGQGLAMVIERV 400 (401)
T ss_pred --------------------CCceEEEEEecCChhhEEEEEec
Confidence 02233444556677788888864
|
|
| >PRK08256 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.6e-21 Score=207.83 Aligned_cols=280 Identities=19% Similarity=0.273 Sum_probs=186.7
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
...|+.+++++||+|+|+++++|+ ++++|+..+... ....+...+
T Consensus 22 ~~~La~~A~~~Al~dAGl~~~dID-------~~~~g~~~~~~~----------------------------~~~~~~~~l 66 (391)
T PRK08256 22 YPDMAAEAGRAALADAGIDYDAVQ-------QAYVGYVYGDST----------------------------SGQRALYEV 66 (391)
T ss_pred HHHHHHHHHHHHHHHcCCChHHCC-------eeEEEEEeCCcc----------------------------hhHHHHHHc
Confidence 468999999999999999987554 455554321110 011244568
Q ss_pred CCCC-ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccc-hhh---------hHHHH----------------
Q 008146 315 GWMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PIG---------LGGFV---------------- 367 (576)
Q Consensus 315 gl~G-p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~-p~~---------~~~~~---------------- 367 (576)
|+.+ |.++|+++|+|++.||..|+++|++|++|.+||+|+|.+.. +.. +..+.
T Consensus 67 Gl~~~~~~~v~~~caSg~~ai~~A~~~I~sG~~d~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (391)
T PRK08256 67 GMTGIPIVNVNNNCSTGSTALFLARQAVRSGAADCALALGFEQMQPGALGSVWDDRPSPLERFDKALAELQGFDPAPPAL 146 (391)
T ss_pred CCCCCCCcccccccHHHHHHHHHHHHHHHCCCCCEEEEEEEeeccccccccccccccchhhhhhhhhhhhcccccCCccH
Confidence 9988 99999999999999999999999999999999999998642 110 00000
Q ss_pred -Hhh-----hhhccC------------------CCCCCCC-CCCc--------------cCCCcceecCceEEEEEcchH
Q 008146 368 -ACR-----ALSQRN------------------NDPTKAS-RPWD--------------INRDGFVMGEGAGVLLLEELE 408 (576)
Q Consensus 368 -~~~-----~ls~~~------------------~~p~~~~-rpfd--------------~~~~G~v~gEGAaalvL~~~~ 408 (576)
.++ .+...+ .+|.... +|.+ ...|...++||++++||.+++
T Consensus 147 ~~~a~~a~~y~~~~G~t~e~~a~vav~~~~~A~~np~A~~~~~~t~e~~~~s~~i~~Pl~~~d~~~~~DGAaA~il~s~~ 226 (391)
T PRK08256 147 RMFGGAGREHMEKYGTTAETFAKIGVKARRHAANNPYAQFRDEYTLEDVLASPMIWGPLTRLQCCPPTCGAAAAIVCSEE 226 (391)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhhhcCChhhcCCCCCHHHHhcCCcccCCCcHhhcCCCCCCeEEEEEecHH
Confidence 000 000000 0121111 1111 112444579999999999999
Q ss_pred HHHhcCCeeeEEEEEEEEecCCCCCCCC-C---C-ChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHH
Q 008146 409 HAKKRGAKIYAEFRGGSFTSDAYHMTEP-H---P-DGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALI 483 (576)
Q Consensus 409 ~A~~~g~~i~a~I~g~~~~~dg~~~~~~-~---p-~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~ 483 (576)
.|++.+.+++++|.|++...+....... + . .......+++++|+++|++++|||++|+|..++. .|...++
T Consensus 227 ~a~~~~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~ag~~~~DiD~~ei~d~f~~----~~l~~le 302 (391)
T PRK08256 227 FARKHGLDRAVEIVAQAMTTDTPSTFDGRSMIDLVGYDMTRAAAQQVYEQAGIGPEDIDVVELHDCFSA----NELLTYE 302 (391)
T ss_pred HHHhcCCCCCEEEEEEEEeccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEeeccCCcH----HHHHHHH
Confidence 9998876778999999887664322111 1 1 1234568999999999999999999999999986 4444443
Q ss_pred HH-HcCC---------------CCccccccccc--ccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccC
Q 008146 484 HC-FGQN---------------RGLRVNSTKSM--IGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVG 545 (576)
Q Consensus 484 ~~-f~~~---------------~~~~v~s~K~~--iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~ 545 (576)
.. |..+ ..+||+..-+. .||+.||+|+.+++++++||+..-
T Consensus 303 ~lg~~~~Ge~~~~~~~G~~~~~G~~pvN~~GG~ls~Ghp~gasG~~~~~e~~~QL~g~a--------------------- 361 (391)
T PRK08256 303 ALGLCPEGEAEKFIDDGDNTYGGRWVVNPSGGLLSKGHPLGATGLAQCAELTWQLRGTA--------------------- 361 (391)
T ss_pred HcCCCCCCchHHHHHCCCccCCCCeeeCCCCccccCCCCccHHHHHHHHHHHHHhcCCc---------------------
Confidence 33 1111 13455554444 599999999999999999998631
Q ss_pred CcccccCccEEEEeccCCCcceeEEEEee
Q 008146 546 PKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 546 ~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
...+-...+++++++.|.+.++...|+++
T Consensus 362 g~~Qv~~~~~~l~~~~G~~~~~~~~v~~~ 390 (391)
T PRK08256 362 GARQVEGARLALQHNLGLGGACVVTLYQR 390 (391)
T ss_pred CCCcCCccceEEEeccccceeEEEEEEec
Confidence 00111235688999999655666666654
|
|
| >PTZ00455 3-ketoacyl-CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.3e-21 Score=206.00 Aligned_cols=283 Identities=17% Similarity=0.192 Sum_probs=187.1
Q ss_pred HHHHHHHHHHHHHhCCCChhh--hhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHH--
Q 008146 236 MLYLLTAGKKALADGGITEDV--MNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLA-- 311 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~--i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia-- 311 (576)
..|+.+++++||+|+|+++++ || +||+|+..+... .. ...++..++
T Consensus 49 ~eL~~~a~~~al~~agl~~~d~~ID-------~vi~G~~~~~~~---------------------~~--~~~~a~~~~~~ 98 (438)
T PTZ00455 49 EELLATAIQGTLENTGLDGKAALVD-------KVVVGNFLGELF---------------------SS--QGHLGPAAVGS 98 (438)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCcC-------EEEEEecccccc---------------------cc--ccchHHHHHHh
Confidence 578999999999999999986 76 688887532110 00 011222333
Q ss_pred -----HHhCCCC-ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchh-----h-------h----------
Q 008146 312 -----MDLGWMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI-----G-------L---------- 363 (576)
Q Consensus 312 -----~~lgl~G-p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~-----~-------~---------- 363 (576)
..+|+.+ |.++|+++|+||+.||+.|+++|++|++|++||+|+|.+.... . +
T Consensus 99 ~gl~~~~~gl~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~dvvlv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (438)
T PTZ00455 99 LGQSGASNALLYKPAMRVEGACASGGLAVQSAWEALLAGTSDIALVVGVEVQTTVSARVGGDYLARAADYRRQRKLDDFT 178 (438)
T ss_pred ccCcccccccCCCceeEEECcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcchhhhhhccchhhccccccccCcc
Confidence 3456654 9999999999999999999999999999999999999764311 0 0
Q ss_pred -HH-HH-HhhhhhccC-C------------------CCCCC--CCCCc------------------------cCCCccee
Q 008146 364 -GG-FV-ACRALSQRN-N------------------DPTKA--SRPWD------------------------INRDGFVM 395 (576)
Q Consensus 364 -~~-~~-~~~~ls~~~-~------------------~p~~~--~rpfd------------------------~~~~G~v~ 395 (576)
.. |. .+..+.+.+ . +|... .+|.. .-.|...+
T Consensus 179 ~~~~~a~~~~ym~~~ggitrE~la~vAvka~~~a~~nP~A~~~~~~~t~~~~~d~~~~~~e~l~s~~i~~pl~~~d~s~~ 258 (438)
T PTZ00455 179 FPCLFAKRMKYIQEHGHFTMEDTARVAAKAYANGNKNPLAHMHTRKLSLEFCTGASDKNPKFLGNETYKPFLRMTDCSQV 258 (438)
T ss_pred hHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHhcCCHhhccCCCCCceeeccccccchhhhcCCcccCcCchhcCCCc
Confidence 00 10 012222221 0 12211 01111 12234456
Q ss_pred cCceEEEEEcchHHHHhcCCee----eEEEEEEEEecCCCCCCCC--CCChHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q 008146 396 GEGAGVLLLEELEHAKKRGAKI----YAEFRGGSFTSDAYHMTEP--HPDGVGVILCIEKALAHSGVSREDVNYINAHAT 469 (576)
Q Consensus 396 gEGAaalvL~~~~~A~~~g~~i----~a~I~g~~~~~dg~~~~~~--~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgt 469 (576)
+|||+++||.+++.|++.+.++ .++|+|++...+....... ...+.. ..+++++|+++|++++|||++|+|..
T Consensus 259 sDGAaA~vl~See~A~~l~~~p~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~~-~~A~~~a~~~AGl~~~DiD~~Ei~da 337 (438)
T PTZ00455 259 SDGGAGLVLASEEGLQKMGLSPNDSRLVEIKSLACASGNLYEDPPDATRMFTS-RAAAQKALSMAGVKPSDLQVAEVHDC 337 (438)
T ss_pred cccceEEEEecHHHHHhcCCCCCCCccEEEEEEEEecCCcccCccccccchHH-HHHHHHHHHHcCCCHHHCcEeeeccc
Confidence 8999999999999999988776 6899999988663321111 112223 68999999999999999999999999
Q ss_pred CCccCcHHHHHHHHHH-HcC-----------------CCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCC
Q 008146 470 STPAGDIKEYQALIHC-FGQ-----------------NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINL 531 (576)
Q Consensus 470 gt~~gD~~E~~Al~~~-f~~-----------------~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~ 531 (576)
++. .|+..++.. |.. +.++++...--.+||+.||+|+.+++.+++||+..--
T Consensus 338 Fa~----~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~GHP~gAtG~~~v~e~~~QLrg~ag------ 407 (438)
T PTZ00455 338 FTI----AELLMYEALGIAEYGHAKDLIRNGATALEGRIPVNTGGGLLSFGHPVGATGVKQIMEVYRQMKGQCG------ 407 (438)
T ss_pred ChH----HHHHHHHHcCCCCCCchHHHHhcCCcccCCCceeeCCCchhhcCCCcchHHHHHHHHHHHHHhhccc------
Confidence 985 444444332 111 1234444444456999999999999999999985210
Q ss_pred CCCCCCCCcccccCCcccccC-ccEEEEeccC-CCcceeEEEEee
Q 008146 532 ENPDAVVDTNVLVGPKKERLE-VKAALSNSFG-FGGHNSSIIFSP 574 (576)
Q Consensus 532 ~~p~~~~~~~~~~~~~~~~~~-~~~alv~sfG-~gG~na~vil~~ 574 (576)
..+-.. .+++++.+.| +++++...||+.
T Consensus 408 ---------------~~Qv~~~~~~gl~~~~Gg~~~~~~~~vl~~ 437 (438)
T PTZ00455 408 ---------------EYQMKNIPALGATLNMGGDDKTAVSTVLQN 437 (438)
T ss_pred ---------------cCCCCCcccEEEEeccCCCcceEEEEEEec
Confidence 001112 4678888877 666666677754
|
|
| >PRK06366 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.1e-21 Score=206.39 Aligned_cols=270 Identities=18% Similarity=0.220 Sum_probs=192.1
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
..|+.+++++||+|+|+++++|| +|++|+..... .....+..++..+|
T Consensus 27 ~~L~~~a~~~al~dagi~~~dID-------~vi~g~~~~~~-------------------------~~~~~a~~~~~~~G 74 (388)
T PRK06366 27 PQLGGAAIKAVIDDAKLDPALVQ-------EVIMGNVIQAG-------------------------VGQNPAGQAAYHAG 74 (388)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCCCC-------------------------ccCcHHHHHHHHCC
Confidence 56899999999999999998777 78888653110 01122566788899
Q ss_pred CCC--ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchh---------h---h--------H---------
Q 008146 316 WMG--PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI---------G---L--------G--------- 364 (576)
Q Consensus 316 l~G--p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~---------~---~--------~--------- 364 (576)
+.. |.++|+++|+||+.|+..|+++|++|++|++||+|+|.+.... . . .
T Consensus 75 l~~~~p~~~v~~~caSg~~av~~Aa~~I~sG~~d~vla~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 154 (388)
T PRK06366 75 LPFGVTKYTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSNAPFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLID 154 (388)
T ss_pred CCCCCcceeeechhhHHHHHHHHHHHHHhcCCCCEEEEEeeEccccCcccccccccccccccccccchhhhhhcccCccc
Confidence 964 9999999999999999999999999999999999999864210 0 0 0
Q ss_pred -------HHHHhhhhhccC------------------CCCCC-CC---------------------------CC-Ccc--
Q 008146 365 -------GFVACRALSQRN------------------NDPTK-AS---------------------------RP-WDI-- 388 (576)
Q Consensus 365 -------~~~~~~~ls~~~------------------~~p~~-~~---------------------------rp-fd~-- 388 (576)
++...+.+.+.+ .+|.. .. +| |+.
T Consensus 155 ~~~~~~mal~A~~~~~~yGitrE~~a~vAv~s~~~A~~np~ag~~~~ei~p~~~~~~d~~~r~~t~e~~~~s~~v~~p~g 234 (388)
T PRK06366 155 AFYFEHMGVSAERTARKYGITREMADEYSVQSYERAIRATESGEFRNEIVPFNDLDRDEGIRKTTMEDLAKLPPAFDKNG 234 (388)
T ss_pred cccCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhhHhcCCcccccccccccccccCcccCCHHHHhhCCCccCCCC
Confidence 000000000000 01111 11 11 110
Q ss_pred ---CCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEE
Q 008146 389 ---NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYIN 465 (576)
Q Consensus 389 ---~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve 465 (576)
..|...++|||+++||.+++.|++.+.++.++|+|++........ ...+...+++++|+++|++++|||++|
T Consensus 235 ~lt~~d~s~~sDGAaAvvl~See~A~~l~~~pv~~I~g~~~~~~~~~~-----~~~~~~~A~~~al~~Agl~~~DiDv~E 309 (388)
T PRK06366 235 ILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITGYESASLDPLD-----FVEAPIPATRKLLEKQNKSIDYYDLVE 309 (388)
T ss_pred CEehhhcCCcccceeEEEEecHHHHHHcCCCcCEEEEEEEEEecCHHH-----hcccHHHHHHHHHHHcCCCHHHcceee
Confidence 123334689999999999999999998888899999887542211 112236899999999999999999999
Q ss_pred ecCCCCccCcHHHHHHHHHHHcCC-CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCccccc
Q 008146 466 AHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLV 544 (576)
Q Consensus 466 ~Hgtgt~~gD~~E~~Al~~~f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~ 544 (576)
+|..++. .|+..++.. +-. .+++++..--.+|||.||+|+.+++.++.+|+..
T Consensus 310 i~daFa~----~~l~~le~l-gl~g~~vN~~GG~la~GHP~GatG~~~~~~l~~qL~~~--------------------- 363 (388)
T PRK06366 310 HNEAFSI----ASIIVRDQL-KIDNERFNVNGGAVAIGHPIGNSGSRIIVTLINALKTR--------------------- 363 (388)
T ss_pred ccchhHH----HHHHHHHHh-CCCCCccCCCCchhhhCCCcCCCHHHHHHHHHHHHHhc---------------------
Confidence 9999885 455554433 312 2555555555569999999999999999999851
Q ss_pred CCcccccCccEEEEeccCCCcceeEEEEeeC
Q 008146 545 GPKKERLEVKAALSNSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 545 ~~~~~~~~~~~alv~sfG~gG~na~vil~~~ 575 (576)
..++++.+...-||.-..+|||..
T Consensus 364 -------~~~~g~~~~c~~gg~g~a~~~e~~ 387 (388)
T PRK06366 364 -------HMKTGLATLCHGGGGAHTLTLEMV 387 (388)
T ss_pred -------CCCeEEEEEecccChhhEEEEEec
Confidence 235577777788889999999864
|
|
| >PRK07801 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3e-21 Score=205.05 Aligned_cols=270 Identities=19% Similarity=0.184 Sum_probs=188.0
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
..|+.+++++||+|+|+++++|| +|++|+.... . . ....++.......|
T Consensus 27 ~~L~~~a~~~al~dagl~~~~ID-------~vv~g~~~~~-~----------------------~-~~~~~~~~~~l~~g 75 (382)
T PRK07801 27 ADLGAHVLKGLVDRTGIDPAAVD-------DVIFGCVDTI-G----------------------P-QAGNIARTSWLAAG 75 (382)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC-------EEEEEeeccC-C----------------------c-ccccHHHHHHHHcC
Confidence 56899999999999999998777 7888753100 0 0 00112222333345
Q ss_pred C--CCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccc-hh--h--h-----------------H--H----
Q 008146 316 W--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PI--G--L-----------------G--G---- 365 (576)
Q Consensus 316 l--~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~-p~--~--~-----------------~--~---- 365 (576)
+ ..|.++|+++|+||+.||..|+++|++|++|++||+|+|.+.. |. . . . +
T Consensus 76 l~~~~p~~~v~~acaSg~~Av~~Aa~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 155 (382)
T PRK07801 76 LPEEVPGVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIPISSAMTAGEQLGFTSPFAESKGWLHRYGDQEV 155 (382)
T ss_pred CCCCCceeeecchhhhHHHHHHHHHHHHHCCCCCEEEEcchhhhcCCcccccccccccccCCcccccCcchhhhccCCCC
Confidence 4 4689999999999999999999999999999999999996532 20 0 0 0 0
Q ss_pred ---HHHhhhhhccCC------------------CCC----------------------------CCCCCCc-----cCCC
Q 008146 366 ---FVACRALSQRNN------------------DPT----------------------------KASRPWD-----INRD 391 (576)
Q Consensus 366 ---~~~~~~ls~~~~------------------~p~----------------------------~~~rpfd-----~~~~ 391 (576)
+...+.+.+.+. +|. ...+|.. ...|
T Consensus 156 ~~~~~a~~~~~~yG~tre~~a~vav~~~~~a~~n~~ag~~~~~~~p~~~~~~d~~~~~~t~e~~~~~~~i~~~~pl~~~d 235 (382)
T PRK07801 156 SQFRGAELIAEKWGISREEMERFALESHRRAFAAIRAGRFDNEIVPVGGVTVDEGPRETSLEKMAGLKPLVEGGRLTAAV 235 (382)
T ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccccCccccCCcCcCCHHHHhcCCCCCCCCCccccc
Confidence 000000000000 000 0011111 1234
Q ss_pred cceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCC
Q 008146 392 GFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATST 471 (576)
Q Consensus 392 G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt 471 (576)
...++||++++||++++.|++.+.+++++|.+++...+.... ...+...+++++|+++|++++|||++|+|+.++
T Consensus 236 ~~~~~DGaaa~il~s~e~a~~~~~~~~~~i~~~~~~~~~~~~-----~~~~~~~a~~~a~~~agi~~~did~~e~~d~Fa 310 (382)
T PRK07801 236 ASQISDGASAVLLASERAVKRHGLTPRARIHHLSVRGDDPVF-----MLTAPIPATRYALEKTGLSIDDIDVVEINEAFA 310 (382)
T ss_pred CCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCChHh-----hccChHHHHHHHHHHcCCCHHHcCEeeecccch
Confidence 455789999999999999999998889999998766542211 111235789999999999999999999999988
Q ss_pred ccCcHHHHHHHHHHHc-CCCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccc
Q 008146 472 PAGDIKEYQALIHCFG-QNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKER 550 (576)
Q Consensus 472 ~~gD~~E~~Al~~~f~-~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~ 550 (576)
. .|...++. +| ..++++.++....+||+.||+|+.+++.++++|+..
T Consensus 311 ~----~~~~~~e~-lG~~~~pvN~~GG~l~~Ghp~gasG~~~~~e~~~qL~~~--------------------------- 358 (382)
T PRK07801 311 P----VVLAWLKE-TGADPAKVNPNGGAIALGHPLGATGAKLMTTLLHELERT--------------------------- 358 (382)
T ss_pred H----HHHHHHHH-hCCCchhcCCCcchhhhcCcHHHHHHHHHHHHHHHHHhc---------------------------
Confidence 5 45555443 33 224677888888889999999999999999999861
Q ss_pred cCccEEEEeccCCCcceeEEEEee
Q 008146 551 LEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 551 ~~~~~alv~sfG~gG~na~vil~~ 574 (576)
..++++.++.|.||+...+||+.
T Consensus 359 -~~~~gl~~~~gggg~~~~~vl~~ 381 (382)
T PRK07801 359 -GGRYGLQTMCEGGGTANVTIIER 381 (382)
T ss_pred -CCCEEEEEEcccccceeEEEEEe
Confidence 13567888888889999999875
|
|
| >PRK06059 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.1e-21 Score=206.19 Aligned_cols=283 Identities=22% Similarity=0.264 Sum_probs=189.9
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
..|+.+++++||+|+|+++++|+ .|++++.... ....+..+..++..+|
T Consensus 24 ~~La~~A~~~Al~dAgl~~~dId-------~vi~~~~~~~------------------------~~~~~~~a~~va~~lG 72 (399)
T PRK06059 24 VEYGVVAARAALADAGLDWRDVQ-------LVVGADTIRN------------------------GYPGFVAGATFAQALG 72 (399)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCC------------------------ccCCccHHHHHHHHhC
Confidence 67899999999999999998666 5666653210 0011223567889999
Q ss_pred CCC-ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccch--------------------hhh-----HHHHHh
Q 008146 316 WMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIP--------------------IGL-----GGFVAC 369 (576)
Q Consensus 316 l~G-p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p--------------------~~~-----~~~~~~ 369 (576)
+.+ |.++|+++|+|++.||..|+++|++|++|.+||+|+|.+... ..+ .++...
T Consensus 73 ~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~ 152 (399)
T PRK06059 73 WNGAPVSSSYAACASGSQALQSARAQILAGLCDVALVVGADTTPKGFFAPVGGERPDDPDWLRFHLIGATNPVYFALLAR 152 (399)
T ss_pred CCCCceecccchhHHHHHHHHHHHHHHHCCCCCEEEEEEEcccCCCCCcccccccccccchhhcccCCCccHHHHHHHHH
Confidence 987 899999999999999999999999999999999999975421 000 000000
Q ss_pred hhhhcc------------------CCCCCCCCC-CCc--------------cCCCcceecCceEEEEEcchHHHHhc--C
Q 008146 370 RALSQR------------------NNDPTKASR-PWD--------------INRDGFVMGEGAGVLLLEELEHAKKR--G 414 (576)
Q Consensus 370 ~~ls~~------------------~~~p~~~~r-pfd--------------~~~~G~v~gEGAaalvL~~~~~A~~~--g 414 (576)
+.+.+. ..+|+...| |.+ ..-|...+.|||+++||.+++.|++. +
T Consensus 153 ~~~~~yg~s~e~~a~v~~~~~~~a~~Np~A~~r~~~t~e~v~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~~~ 232 (399)
T PRK06059 153 RRMDLYGATVEDFAQVKVKNARHGLLNPNARYRKEVTVEDVLASPVVSDPLRLLDICATSDGAAALIVASKSFARRHLGS 232 (399)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHccCcHhhcCCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEecHHHHHhhccc
Confidence 011110 012222111 111 01255567899999999999999887 6
Q ss_pred CeeeEEEEEEEEecCCCCC--C------------CCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHH
Q 008146 415 AKIYAEFRGGSFTSDAYHM--T------------EPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQ 480 (576)
Q Consensus 415 ~~i~a~I~g~~~~~dg~~~--~------------~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~ 480 (576)
.+..++|+|++...+..+. . .+.+.......+++++|+++|++++|||++|+|+..+. .|+.
T Consensus 233 ~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~~a~~~agl~~~Did~~El~d~f~~----~~l~ 308 (399)
T PRK06059 233 VAGVPSVRAISTVTPRYPQHLPELPDIATDSTAAVPAPERVFKDQILDAAYAEAGIGPEDLSLAEVYDLSTA----LELD 308 (399)
T ss_pred cCCceEEEEEEEecccccccccccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCcEEeecccChH----HHHH
Confidence 5667889999876533211 0 01111222357899999999999999999999999886 3444
Q ss_pred HHHHH-HcC---------------CCCcccccccc--cccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCccc
Q 008146 481 ALIHC-FGQ---------------NRGLRVNSTKS--MIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNV 542 (576)
Q Consensus 481 Al~~~-f~~---------------~~~~~v~s~K~--~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~ 542 (576)
.++.. |.. ..++||+..-+ ..||+.|++|+.+++.+++||+..-
T Consensus 309 ~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qLrg~a------------------ 370 (399)
T PRK06059 309 WYEHLGLCPKGEAEALLRSGATTLGGRIPVNPSGGLACFGEAIPAQAIAQVCELTWQLRGQA------------------ 370 (399)
T ss_pred HHHHcCCCCCCcHHHHHHCCCccCCCCeeecCCCccccCCccCCccHHHHHHHHHHHhccCc------------------
Confidence 43222 110 11234444444 4599999999999999999998621
Q ss_pred ccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 543 LVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 543 ~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
...+-...+++++.+.|.+|+.+.+||++
T Consensus 371 ---g~~Qv~~a~~gl~~~~g~~g~~~~~~l~~ 399 (399)
T PRK06059 371 ---GGRQVEGARVGITANQGLFGHGSSVIVAR 399 (399)
T ss_pred ---CCccCCCccEEEEeccCCcccceEEEecC
Confidence 00111235678888888889999999874
|
|
| >PRK06504 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.5e-21 Score=201.98 Aligned_cols=270 Identities=15% Similarity=0.122 Sum_probs=188.4
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
..|+.++++++|+|+|+++++|| .|++|+.... .......+..+...-|
T Consensus 27 ~~L~~~a~~~al~~a~l~~~~Id-------~vi~G~~~~~------------------------~~~~~~~ar~~~l~~g 75 (390)
T PRK06504 27 ADLAAQVLDALVDRSGADPALIE-------DVIMGCVSQV------------------------GEQATNVARNAVLASK 75 (390)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccc------------------------ccccccHHHHHHHHcC
Confidence 67899999999999999998777 6899875310 0000112333333335
Q ss_pred C--CCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhh-h----------------------------H
Q 008146 316 W--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG-L----------------------------G 364 (576)
Q Consensus 316 l--~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~-~----------------------------~ 364 (576)
| .-|.++|+.+|+||+.|+..|+++|++|++|++||||+|.|..... . .
T Consensus 76 l~~~vP~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvLagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (390)
T PRK06504 76 LPESVPGTSIDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRVPMGSPSTLPAKNGLGHYKSPGMEERYPGIQFSQ 155 (390)
T ss_pred CCCCCceEEEechhhHHHHHHHHHHHHHHCCCCCEEEEeeeeecCCCccccccccccccccccccccccccccCCCCCCH
Confidence 5 4599999999999999999999999999999999999998753210 0 0
Q ss_pred HHHHhhhhhccCC-----------------------------------CCCC---------------------CCCCCcc
Q 008146 365 GFVACRALSQRNN-----------------------------------DPTK---------------------ASRPWDI 388 (576)
Q Consensus 365 ~~~~~~~ls~~~~-----------------------------------~p~~---------------------~~rpfd~ 388 (576)
.+.......+.+. ++.+ ..+|...
T Consensus 156 ~~aae~~a~~ygisre~~d~~A~ksh~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~~De~~r~~~t~e~l~~~~~~~~ 235 (390)
T PRK06504 156 FTGAEMMAKKYGLSKDQLDEFALQSHQRAIAATQAGKFKAEIVPLEITRADGSGEMHTVDEGIRFDATLEGIAGVKLIAE 235 (390)
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHhHHcCCCccccccccccCCCCCceEEccCCCCCCCCCHHHHhcCCCCCC
Confidence 0000000000000 0000 1123211
Q ss_pred -----CCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccE
Q 008146 389 -----NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNY 463 (576)
Q Consensus 389 -----~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ 463 (576)
..|...++||++++||.+++.|++.+.++..+|.+++...+.. .....+...+++++|+++|++++|||+
T Consensus 236 ~g~lt~~n~s~~~DGAaA~vl~s~~~A~~l~~~p~~~i~~~~~~~~~~-----~~~~~~~~~a~~~a~~~agl~~~Did~ 310 (390)
T PRK06504 236 GGRLTAATASQICDGASGVMVVNERGLKALGVKPLARIHHMTVIGGDP-----VIMLEAPLPATERALKKAGMKIDDIDL 310 (390)
T ss_pred CCCCcCccCCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEeecCc-----hhhhccHHHHHHHHHHHcCCCHHHCCE
Confidence 1244557899999999999999998888877888877654421 112334567999999999999999999
Q ss_pred EEecCCCCccCcHHHHHHHHHHHcC-CCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCccc
Q 008146 464 INAHATSTPAGDIKEYQALIHCFGQ-NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNV 542 (576)
Q Consensus 464 ve~Hgtgt~~gD~~E~~Al~~~f~~-~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~ 542 (576)
+|+|..++. .|+..++ .+|- ..++++++....+||+.||+|+.++..++.+|++.
T Consensus 311 ~Ei~d~Fa~----~~l~~~e-~lG~~~~pvN~~GG~la~Ghp~gatG~r~~~~l~~~lr~~------------------- 366 (390)
T PRK06504 311 YEVNEAFAS----VPLAWLK-ATGADPERLNVNGGAIALGHPLGASGTKLMTTLVHALKQR------------------- 366 (390)
T ss_pred EEecccchH----HHHHHHH-HhCCCCCCcCCCCcHHhcCCCcchhHHHHHHHHHHHHHhh-------------------
Confidence 999999885 4444443 3342 23577777777789999999999999999999851
Q ss_pred ccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 543 LVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 543 ~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
..++++.+..|.||....+||+.
T Consensus 367 ---------~~~~gl~~~~~ggg~g~a~ile~ 389 (390)
T PRK06504 367 ---------GKRYGLQTMCEGGGMANVTIVER 389 (390)
T ss_pred ---------CCCeEEEEEeecccceeEEEEEe
Confidence 23567777787788989899875
|
|
| >PRK06158 thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.4e-21 Score=202.48 Aligned_cols=275 Identities=21% Similarity=0.216 Sum_probs=185.5
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
..|+.+++++||+|||+++++|| ++++++... ......++..+|
T Consensus 29 ~eL~~eA~~~Al~dAgl~~~dID-------~iv~~~~~~-----------------------------~~~~~~la~~lG 72 (384)
T PRK06158 29 MELLAQAAHRALADAGLTMADVD-------GLFTASPDD-----------------------------ALWGLSVAEYLG 72 (384)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEecCCC-----------------------------CCcHHHHHHHcC
Confidence 56899999999999999998777 677775310 011235788899
Q ss_pred CCC-ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEe-ccccccc---------------------hhhhHHHHHhhhh
Q 008146 316 WMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCG-GSDAAVI---------------------PIGLGGFVACRAL 372 (576)
Q Consensus 316 l~G-p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvg-Gvd~~~~---------------------p~~~~~~~~~~~l 372 (576)
+.+ |.+.++++|+|+..+|+.|+++|++|.+|+|||+ |.+.+.. |..+..+...+.+
T Consensus 73 l~~~~~~~~~~g~~s~~~al~~A~~~I~sG~~d~vLV~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al~a~~ym 152 (384)
T PRK06158 73 IRPRFVDGTMIGGSSFLAHLLPAALALEAGLCDVALICYGSNQRSAGGKLRSMLDPQPYEAPYKPVNPVSAYALAAARHM 152 (384)
T ss_pred CCCeeeccccCccHHHHHHHHHHHHHHHcCCCCEEEEeeccccccCcccccccccccchhcccCCCCcHHHHHHHHHHHH
Confidence 976 7888999999999999999999999999999985 6664311 0111111111111
Q ss_pred hccC------------------CCCCCC----------------CCCCccCCCcceecCceEEEEEcchHHHHhcCCeee
Q 008146 373 SQRN------------------NDPTKA----------------SRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIY 418 (576)
Q Consensus 373 s~~~------------------~~p~~~----------------~rpfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~i~ 418 (576)
.+.+ .+|... +.|+.. .|...++||++++||++++.|++.+.++
T Consensus 153 ~~yG~t~e~~a~vav~~~~~a~~NP~A~~~~~~t~e~vl~s~~ia~Pl~~-~d~~~~~DGAaAvVL~s~e~A~~l~~~~- 230 (384)
T PRK06158 153 HQYGTTREQLAEVAVAARQWAQLNPEAFMRDPLTIDDVLAARMVSDPLSV-RDCCLVTDGAGAVVMVRADRARDLPRPP- 230 (384)
T ss_pred HHHCcCHHHHHHHHHHHHHHHhcCchhhhCCCCCHHHHhcCCccCCCCch-hhcCCccCCeEEEEEecHHHHhhcCCCc-
Confidence 1111 112211 123222 4677899999999999999998876654
Q ss_pred EEEEEEEEecCCCCCC-CCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHH-HcC--------
Q 008146 419 AEFRGGSFTSDAYHMT-EPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHC-FGQ-------- 488 (576)
Q Consensus 419 a~I~g~~~~~dg~~~~-~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~-f~~-------- 488 (576)
+.|.|++..++..... .+.........+++++|+++|++|+|||++|+|+..+. .|...++.. |..
T Consensus 231 v~i~g~~~~~~~~~~~~~~~~~~~~~~~aa~~A~~~AGi~p~DId~~ElyD~Fs~----~~l~~~E~lG~~~~Ge~~~~~ 306 (384)
T PRK06158 231 VYVLGAAAATWHRQISSMPDLTVTAAAESGPRAFAMAGLTPADIDVVELYDAFTI----NTILFLEDLGFCAKGEGGAFV 306 (384)
T ss_pred EEEEEEEEecCCcccccccchhhhHHHHHHHHHHHHcCCCHHHCcEEEecCCchH----HHHHHHHHcCCCCCCcHHHHH
Confidence 6688888777655432 22333455678999999999999999999999999996 444443322 110
Q ss_pred -------CCCccccccccc--ccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEe
Q 008146 489 -------NRGLRVNSTKSM--IGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSN 559 (576)
Q Consensus 489 -------~~~~~v~s~K~~--iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~ 559 (576)
..++||+..-+. .||+ |++|+.+++++++||+..- ...+-...++++++
T Consensus 307 ~~G~~~~~G~~PvN~sGG~ls~Ghp-gatG~~~~~E~~~QLrg~a---------------------g~rQv~~a~~gl~~ 364 (384)
T PRK06158 307 EGGRIAPGGRLPVNTNGGGLSCVHP-GMYGLFLLIEAVRQLRGEA---------------------GERQVAGAEVALAH 364 (384)
T ss_pred HCCCCccCCCccccCCChhhcCCCC-chhhHHHHHHHHHHHcCCC---------------------CCCcCCCCCEEEEE
Confidence 123566554444 4999 9999999999999998621 00111245788888
Q ss_pred ccC-CCcceeEEEEee
Q 008146 560 SFG-FGGHNSSIIFSP 574 (576)
Q Consensus 560 sfG-~gG~na~vil~~ 574 (576)
++| ++.++..+|+++
T Consensus 365 ~~Gg~~~~~~~~vl~~ 380 (384)
T PRK06158 365 GNGGVLSSQATAILGT 380 (384)
T ss_pred CCCCcccceEEEEEec
Confidence 887 444455566654
|
|
| >PRK08313 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.6e-20 Score=199.46 Aligned_cols=284 Identities=17% Similarity=0.164 Sum_probs=191.9
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
..|+.+++++||+|||+++++|| ++++++.. ++ +.+. ...+..++..||
T Consensus 25 ~eL~~eAa~~Al~dAgl~~~dID-------~iv~~~~~-~~---------------------~~~~--~~~~~~va~~LG 73 (386)
T PRK08313 25 AGLVREAIDRALADAGLTWDDID-------AVVVGKAP-DF---------------------FEGV--MMPELFLADALG 73 (386)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEeccc-cc---------------------cccc--cCchHHHHHhcC
Confidence 56899999999999999998776 67777521 10 0000 112357889999
Q ss_pred CCC-ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchh--------------------hhHHHHHhhhhhc
Q 008146 316 WMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI--------------------GLGGFVACRALSQ 374 (576)
Q Consensus 316 l~G-p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~--------------------~~~~~~~~~~ls~ 374 (576)
+.. |.+.|+++|+++..++..|+++|++|++|.|||+|+|.+.... .+..+...+.+..
T Consensus 74 l~~~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLVvg~e~~s~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~ym~~ 153 (386)
T PRK08313 74 ATGKPLIRVHTAGSVGGSTAVVAASLVQSGVYRRVLAVAWEKQSESNAMWALSIPVPFTKPVGAGAGGYFAPHVRAYIRR 153 (386)
T ss_pred CCCCceEEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEccCCccccccccccccccccccchHHHHHHHHHHHHHH
Confidence 976 8899999999999999999999999999999999998653210 0111111111111
Q ss_pred cC------------------CCCCCCC-CC-Cc--------------cCCCcceecCceEEEEEcchHHHHhcCCeeeEE
Q 008146 375 RN------------------NDPTKAS-RP-WD--------------INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAE 420 (576)
Q Consensus 375 ~~------------------~~p~~~~-rp-fd--------------~~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~ 420 (576)
.+ .+|.... +| ++ ..-|...++||++++||.+.+.|++.+.++.++
T Consensus 154 ~G~~~e~la~vav~~~~~A~~NP~A~~r~~~~t~e~v~~s~~ia~Pl~~~d~~~~~DGAaAvvl~s~e~a~~l~~~~~~~ 233 (386)
T PRK08313 154 SGAPEHIGAMVAVKDRLNGAKNPYAHLHQPDITLEKVMASQMLWDPIRFDETCPSSDGACAVVIGDEEAADAAAGRPVAW 233 (386)
T ss_pred HCcCHHHHHHHHHHHHHHHccCcHHhcCCCCCCHHHHhcCCcccCCCchhccCCCCCceEEEEEecHHHHHhcCCCCCeE
Confidence 10 1222211 11 22 123555679999999999999998877788889
Q ss_pred EEEEEEecCCCCCCC-CCCChHHHHHHHHHHHHHcCCC--CCCccEEEecCCCCccCcHHHHHHHHHH-HcC--------
Q 008146 421 FRGGSFTSDAYHMTE-PHPDGVGVILCIEKALAHSGVS--REDVNYINAHATSTPAGDIKEYQALIHC-FGQ-------- 488 (576)
Q Consensus 421 I~g~~~~~dg~~~~~-~~p~~~~~~~ai~~AL~~Agl~--~~dId~ve~Hgtgt~~gD~~E~~Al~~~-f~~-------- 488 (576)
|+|++..++...... +.....+...+++++|+++|++ ++|||++|+|+.++. .|...++.. |..
T Consensus 234 I~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~p~~Did~~el~d~F~~----~~~~~~e~lGl~~~G~~~~~~ 309 (386)
T PRK08313 234 IHGTAMRTEPLAFAGRDQVNPQAGRDAAAALWKAAGITDPRDEIDVAEIYVPFSW----FEPMWLENLGFAPEGEGWKLT 309 (386)
T ss_pred EEEEEEEecCcccccccccccHHHHHHHHHHHHHcCCCCChhhCCEEEeccCChH----HHHHHHHHcCCCCCCchHHHH
Confidence 999998877543322 2233456778999999999998 699999999999986 444433322 111
Q ss_pred -------CCCcccccccccc-cccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEec
Q 008146 489 -------NRGLRVNSTKSMI-GHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNS 560 (576)
Q Consensus 489 -------~~~~~v~s~K~~i-GH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~s 560 (576)
..++||+..-+.+ ||+.|++|+.+++++++||+..- ...+-...+++++.+
T Consensus 310 ~~G~~~~~G~~pvN~~GG~l~g~p~gatG~~~~~e~~~qlrG~a---------------------g~rQv~~a~~~l~~~ 368 (386)
T PRK08313 310 EAGETAIGGRLPVNPSGGVLSSNPIGASGMIRFAEAALQVMGKA---------------------GEHQVDGARKALGHA 368 (386)
T ss_pred HCCCcCCCCCccccCCCcccccCCCcHHHHHHHHHHHHHhcccc---------------------cCCcCCCccEEEEec
Confidence 1235665444444 99999999999999999998621 001112456788888
Q ss_pred cCCC-cceeEEEEeeC
Q 008146 561 FGFG-GHNSSIIFSPY 575 (576)
Q Consensus 561 fG~g-G~na~vil~~~ 575 (576)
+|.. ...+.+||+.-
T Consensus 369 ~Gg~~~~~~~~v~~~~ 384 (386)
T PRK08313 369 YGGGSQFFSMWVVGSE 384 (386)
T ss_pred cCCcceEEEEEEEecC
Confidence 8743 34444555543
|
|
| >PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.8e-21 Score=204.24 Aligned_cols=271 Identities=20% Similarity=0.246 Sum_probs=189.1
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
..|+.+++++||+|+|+++++|| .|++|+.... .....++..++..+|
T Consensus 30 ~eL~~~a~~~al~~agl~~~~ID-------~vi~G~~~~~-------------------------~~~~~~ar~~a~~aG 77 (428)
T PRK08963 30 VDLGKMVVGELLARSEIDPELIE-------QLVFGQVVQM-------------------------PEAPNIAREIVLGTG 77 (428)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEeccCCC-------------------------CCccHHHHHHHHHCC
Confidence 56889999999999999998776 6899975310 011224566888899
Q ss_pred CC--CccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhh--H-----------------H--------H
Q 008146 316 WM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGL--G-----------------G--------F 366 (576)
Q Consensus 316 l~--Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~--~-----------------~--------~ 366 (576)
+. -|.++|+++|+||+.|+..|+++|++|++|++||+|+|.+...... . . +
T Consensus 78 l~~~~P~~tV~~aCaSG~~Ai~~Aa~~I~sG~~dvvLvgG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (428)
T PRK08963 78 MNVHTDAYSVSRACATSFQAVANVAESIMAGTIDIGIAGGADSSSVLPIGVSKKLARALVDLNKARTLGQRLKLFSRLRL 157 (428)
T ss_pred CCCCCcceeehhhhHHHHHHHHHHHHHHHCCCCCEEEEecccccCCCccccccccccchhccccccccCcccccccccch
Confidence 96 4999999999999999999999999999999999999987542200 0 0 0
Q ss_pred ---------------------HHhhhhhccCC------------------C----------------CCC-------CCC
Q 008146 367 ---------------------VACRALSQRNN------------------D----------------PTK-------ASR 384 (576)
Q Consensus 367 ---------------------~~~~~ls~~~~------------------~----------------p~~-------~~r 384 (576)
.....+...+. . |.. ..|
T Consensus 158 ~~~~~~~~~~~~~~~~~~m~~~A~~~~~~ygisre~~~~~avksh~~a~~~~~~g~~~~ei~p~~~~p~a~~~~~D~~~r 237 (428)
T PRK08963 158 RDLLPVPPAVAEYSTGLRMGDTAEQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVPPYKQPLEEDNNIR 237 (428)
T ss_pred hhccccCcccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeEEecCCceeeCCCCCCC
Confidence 00000000000 0 111 011
Q ss_pred ------------C-Cc------cCCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHH
Q 008146 385 ------------P-WD------INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVIL 445 (576)
Q Consensus 385 ------------p-fd------~~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ 445 (576)
| |+ ...|...++|||+++||++++.|++.+.++.++|.+++...... ... ...+...
T Consensus 238 ~~~t~e~~~~~~~v~~p~~g~lt~~~~~~~~DGAaA~vl~see~A~~l~~~p~~~i~g~~~~~~~~---~~~-~~~~~~~ 313 (428)
T PRK08963 238 GDSTLEDYAKLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYLRSYAFAAIDV---WQD-MLLGPAY 313 (428)
T ss_pred CCCCHHHHhcCCccccCCCCceehhhcCCCCCceEEEEEecHHHHHHcCCCccEEEEEEecccCCc---hhh-hhhHHHH
Confidence 1 11 01233446999999999999999999999999999988764111 000 1234568
Q ss_pred HHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHH-----H----cCC--------CCcccccccccccccccch
Q 008146 446 CIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHC-----F----GQN--------RGLRVNSTKSMIGHLLGAA 508 (576)
Q Consensus 446 ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~-----f----~~~--------~~~~v~s~K~~iGH~~gAs 508 (576)
+++++|+++|++++|||++|+|..++. .|+..++.. + +.. .+++++..--..||+.||+
T Consensus 314 a~~~al~~AGl~~~DiD~~Ei~d~Fa~----~~l~~~e~l~~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gas 389 (428)
T PRK08963 314 ATPLALERAGLTLADLTLIDMHEAFAA----QTLANLQMFASERFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAAT 389 (428)
T ss_pred HHHHHHHHcCCCHHHCCEEEEccccHH----HHHHHHHHhcCchhhhhcccccccCCCCCCCccCCCCCHHhcCCCcccc
Confidence 999999999999999999999999884 333333322 0 110 1333444444469999999
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 509 GAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 509 G~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
|+..++.+++||+.. .-++++++..+-||....+|||.
T Consensus 390 G~~~~~e~~~qLrg~----------------------------~g~~gl~~~c~ggG~g~a~~ie~ 427 (428)
T PRK08963 390 GARMITQTLHELRRR----------------------------GGGLGLTTACAAGGLGAAMVLEV 427 (428)
T ss_pred HHHHHHHHHHHHhhc----------------------------CCCEEEEEEccccChhhEEEEEe
Confidence 999999999999851 12468888889999999999984
|
|
| >PRK06157 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.7e-20 Score=200.08 Aligned_cols=251 Identities=17% Similarity=0.154 Sum_probs=170.5
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
..|+.+++++||+|+|+++++|| +|++|+....+. .......++..+|
T Consensus 28 ~~L~~ea~~~AL~dagl~~~dID-------~v~vg~~~~~~~-------------------------~~~~~~~~a~~lG 75 (398)
T PRK06157 28 EDLMVEAFLEALADAGIEPKDID-------AAWFGTHYDEIG-------------------------SGKSGTPLSRALR 75 (398)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccccc-------------------------ccchhHHHHHHcC
Confidence 57899999999999999998777 788886431100 0001234677899
Q ss_pred CCC-ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchh-----------------------hhHHHHHhhh
Q 008146 316 WMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI-----------------------GLGGFVACRA 371 (576)
Q Consensus 316 l~G-p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~-----------------------~~~~~~~~~~ 371 (576)
+.+ |.++|+++|+|++.||++|+.+|++|++|++||+|+|.+.... ....+...+.
T Consensus 76 l~~~~~~~v~~~c~sg~~ai~~A~~~I~sG~~d~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~ 155 (398)
T PRK06157 76 LPNIPVTRVENFCATGSEAFRGAVYAVASGAYDIALALGVEKLKDTGYGGLPVANPGTLADMTMPNVTAPGNFAQLASAY 155 (398)
T ss_pred CCCCCEEEEecccHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCccccccccccccchhcccccCchHHHHHHHHHHH
Confidence 976 8889999999999999999999999999999999999753200 0000000011
Q ss_pred hhccC----------------------CCCCCCC------------CCC-c--cCCCcceecCceEEEEEcchHHHHhcC
Q 008146 372 LSQRN----------------------NDPTKAS------------RPW-D--INRDGFVMGEGAGVLLLEELEHAKKRG 414 (576)
Q Consensus 372 ls~~~----------------------~~p~~~~------------rpf-d--~~~~G~v~gEGAaalvL~~~~~A~~~g 414 (576)
+...+ .+|+... +|. + ..-|...++||++++||.+++.|++.+
T Consensus 156 ~~~yG~t~e~~~~~~a~vav~~~~~A~~np~A~~r~~~t~e~v~~s~~v~~Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~ 235 (398)
T PRK06157 156 AAKYGVSREDLKRAMAHVSVKSHANGARNPKAHLRKAVTEEQVLKAPMIAGPLGLFDCCGVSDGAAAAIVTTPEIARALG 235 (398)
T ss_pred HHHhCCCHHHHcccccHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCCchhccCCCCCccEEEEEecHHHHHhhC
Confidence 11100 0122111 111 0 112555579999999999999999888
Q ss_pred CeeeEEEEEEEEecCCCCC---CCCCCC-hHHHHHHHHHHHHHcCCC--CCCccEEEecCCCCccCcHHHHHHHHHH-Hc
Q 008146 415 AKIYAEFRGGSFTSDAYHM---TEPHPD-GVGVILCIEKALAHSGVS--REDVNYINAHATSTPAGDIKEYQALIHC-FG 487 (576)
Q Consensus 415 ~~i~a~I~g~~~~~dg~~~---~~~~p~-~~~~~~ai~~AL~~Agl~--~~dId~ve~Hgtgt~~gD~~E~~Al~~~-f~ 487 (576)
.+..++|+|++...+.... ...++. ......+++++|+++|++ ++|||++|+|+.++. .|+..++.. |.
T Consensus 236 ~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGl~~~~~Did~~Ei~D~Fs~----~~l~~~e~lGl~ 311 (398)
T PRK06157 236 KKDPVYVKALQLAVSNGWELQYNGWDGSYFPTTRIAARKAYREAGITDPREELSMAEVHDCFSI----TELVTMEDLGLS 311 (398)
T ss_pred CCCCeEEEEEEEecccccccccccccccccHHHHHHHHHHHHHcCCCCchhcCCEEEEecCChH----HHHHHHHHcCCC
Confidence 7567899999887553211 111221 223467999999999998 799999999999986 444444322 11
Q ss_pred C---------------CCCcccccccc--cccccccchhHHHHHHHHHHHHc
Q 008146 488 Q---------------NRGLRVNSTKS--MIGHLLGAAGAVEAIAVVQAIRT 522 (576)
Q Consensus 488 ~---------------~~~~~v~s~K~--~iGH~~gAsG~~~li~~~l~L~~ 522 (576)
. ...+|++..-+ .+||+.||+|+.+++++++||+.
T Consensus 312 ~~Ge~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg 363 (398)
T PRK06157 312 ERGQAWRDVLDGFFDADGGLPCQIDGGLKCFGHPIGASGLRMLYEMYLQLLG 363 (398)
T ss_pred CCCchHHHHHCCCccCCCCeeecCCCCcccCCCcccHhHHHHHHHHHHHhcc
Confidence 1 12345544444 45999999999999999999986
|
|
| >PRK06065 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.6e-20 Score=195.63 Aligned_cols=281 Identities=15% Similarity=0.176 Sum_probs=186.1
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
..|+.+|+++||+|+|+++++|| ++++++....+ .+ ....+..++..+|
T Consensus 30 ~~L~~~A~~~Al~dagl~~~dID-------~~i~~~~~~~~----------------------~~--~~~~a~~l~~~lG 78 (392)
T PRK06065 30 QELAWEAASKALDEAGLELKDID-------CVVIGSAPDAF----------------------DG--VHMKGEYLSHGSG 78 (392)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEeccCCcc----------------------cc--cccHHHHHHHHcC
Confidence 56899999999999999998776 77877521100 00 1234556888898
Q ss_pred CC-CccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccch-------------------hh-----hHHHHHhh
Q 008146 316 WM-GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIP-------------------IG-----LGGFVACR 370 (576)
Q Consensus 316 l~-Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p-------------------~~-----~~~~~~~~ 370 (576)
+. .|.+.|+++|+|+..+|..|+++|++|.+|.|||+|+|.+... .. +.++...+
T Consensus 79 ~~~~~~~~V~~~gasG~~al~~A~~~I~sG~ad~vLVvg~e~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~Al~a~r 158 (392)
T PRK06065 79 GIRKPVSRVYVGGATGVMTAIAGWYHVASGLCQKVLAVAEEKMSPARPHPQAVFRYIWDPILEKPLNPNLIWIFAMEMHR 158 (392)
T ss_pred CCCCCeEEEecCchhHHHHHHHHHHHHhCCCCCEEEEEEeecccccccchhHHHhhhccchhccCCCccHHHHHHHHHHH
Confidence 87 4999999999999999999999999999999999999874211 00 01121222
Q ss_pred hhhccCC------------------CCCCCC-CCCcc--------------CCCcceecCceEEEEEcchHHHHhcCCee
Q 008146 371 ALSQRNN------------------DPTKAS-RPWDI--------------NRDGFVMGEGAGVLLLEELEHAKKRGAKI 417 (576)
Q Consensus 371 ~ls~~~~------------------~p~~~~-rpfd~--------------~~~G~v~gEGAaalvL~~~~~A~~~g~~i 417 (576)
.+.+.+. +|.... +|.+. .-|...++||++++||.+++.|++.+.++
T Consensus 159 ym~~yG~~~e~lA~vav~~~~~A~~NP~A~~r~~lt~e~vl~s~~ia~Pl~l~d~~~~~DGAaA~vl~s~e~A~~l~~~~ 238 (392)
T PRK06065 159 YMATYGIKKEEIALVSVKNKRNALNNPYAQLGSKITVEDVLKSEVLVWPVQLLDVSPVSDGAAAIVLASEDLARRYTDTP 238 (392)
T ss_pred HHHHHCcCHHHHHHHHHHHHHhhccCchhhhcCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEeCHHHHHhcCCCC
Confidence 2222111 121111 11110 12455689999999999999999887655
Q ss_pred eEEEEEEEEecCCCCCCCC-CCChHHHHHHHHHHHHHcCCCC--CCccEEEecCCCCccCcHHHHHHHHHH---------
Q 008146 418 YAEFRGGSFTSDAYHMTEP-HPDGVGVILCIEKALAHSGVSR--EDVNYINAHATSTPAGDIKEYQALIHC--------- 485 (576)
Q Consensus 418 ~a~I~g~~~~~dg~~~~~~-~p~~~~~~~ai~~AL~~Agl~~--~dId~ve~Hgtgt~~gD~~E~~Al~~~--------- 485 (576)
..|+|++...+....... .........+.+++|+++|+++ +|||++|+|+..+. .|+..++..
T Consensus 239 -v~I~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~aGi~~p~~diD~~ei~D~Fs~----~~l~~~E~lG~~~~G~~~ 313 (392)
T PRK06065 239 -VWVEGVGWTLDNTEWPNRDLAYPRYVEFAARMAYKMAGIERPRKEIDVAEPYDPFDY----KELHHLEGLQLAKRGEAP 313 (392)
T ss_pred -EEEEEEEEecCccccccccccccHHHHHHHHHHHHHcCCCCchhhCcEEEecCCChH----HHHHHHHHcCCCCCCcHH
Confidence 458999887665432211 1233445689999999999985 99999999999985 344333222
Q ss_pred --H-----cCCCCcccccccc--cccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCc-cE
Q 008146 486 --F-----GQNRGLRVNSTKS--MIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEV-KA 555 (576)
Q Consensus 486 --f-----~~~~~~~v~s~K~--~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~-~~ 555 (576)
+ .....+||+..-+ ..||+.||+|+.+++++++||+..- ...|-... ++
T Consensus 314 ~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~a---------------------g~rQv~~a~~~ 372 (392)
T PRK06065 314 KLLKEGVFDIDGDIPSSPSGGLLGVGNPIAAAGLMKVISIYWQLKGTA---------------------GKMQVKKPVHT 372 (392)
T ss_pred HHHHCCCccCCCCeeecCCCccccCCCCccHHHHHHHHHHHHHHhccc---------------------cCCcCCCccce
Confidence 1 0111345544443 3599999999999999999998621 01111134 67
Q ss_pred EEEeccC-CCcceeEEEEe
Q 008146 556 ALSNSFG-FGGHNSSIIFS 573 (576)
Q Consensus 556 alv~sfG-~gG~na~vil~ 573 (576)
++++++| .+..++.+||+
T Consensus 373 ~l~~~~Gg~~~~~~~~il~ 391 (392)
T PRK06065 373 GVAQAWGDLMQAGTVIVLR 391 (392)
T ss_pred eEEeccccccceeEEEEec
Confidence 8888887 44455556654
|
|
| >PRK06289 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=3e-20 Score=198.81 Aligned_cols=254 Identities=19% Similarity=0.214 Sum_probs=167.6
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
..|+.+++++||+|||+++++|| +|++|+..+.+.. . ...... ... ....+
T Consensus 27 ~eLa~eA~~~AL~dAgl~~~dID-------~vi~g~~~~~~~~---------------~----~~~~~~-~~~--~~~~~ 77 (403)
T PRK06289 27 ADLTREVVDGTLAAAGVDADDIE-------VVHVGNFFGELFA---------------G----QGHLGA-MPA--TVHPA 77 (403)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccccccc---------------c----ccccch-HHH--HHhhc
Confidence 67899999999999999998777 7888865322100 0 000000 011 12234
Q ss_pred CCC-ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhh--------------------------HHHHH
Q 008146 316 WMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGL--------------------------GGFVA 368 (576)
Q Consensus 316 l~G-p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~--------------------------~~~~~ 368 (576)
+.| |+++|+++|+|++.||+.|+.+|++|++|++||+|+|.+...... .++..
T Consensus 78 ~~g~~~~~v~~~Casg~~al~~Aa~~I~sG~~~~VLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a 157 (403)
T PRK06289 78 LWGVPASRHEAACASGSVATLAAMADLRAGRYDVALVVGVELMKTVPGDVAAEHLGAAAWTGHEGQDARFPWPSMFARVA 157 (403)
T ss_pred CCCCceeecccccHHHHHHHHHHHHHHHcCCCCEEEEEEEEecCCCCchhhHHhhhcccccccccccCCCccHHHHHHHH
Confidence 544 899999999999999999999999999999999999975422100 00000
Q ss_pred hhhhhccC------------------CCCCCCCC------CCc--------------cCCCcceecCceEEEEEcchHHH
Q 008146 369 CRALSQRN------------------NDPTKASR------PWD--------------INRDGFVMGEGAGVLLLEELEHA 410 (576)
Q Consensus 369 ~~~ls~~~------------------~~p~~~~r------pfd--------------~~~~G~v~gEGAaalvL~~~~~A 410 (576)
.+.+.+.+ .+|....+ |.. .--|...++||++++||.+++.|
T Consensus 158 ~~y~~~yG~t~e~la~va~~~~~~A~~NP~A~~~~~~~~~~~~~~d~~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~e~a 237 (403)
T PRK06289 158 DEYDRRYGLDEEHLRAIAEINFANARRNPNAQTRGWAFPDEATNDDDATNPVVEGRLRRQDCSQVTDGGAGVVLASDAYL 237 (403)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHccCcHhhcCccccccccchhhhhcCCcccCCCchhhcCCCCCceeEEEEEcHHHH
Confidence 01111100 01211111 110 01234456899999999999999
Q ss_pred HhcCC-eeeEEEEEEEEecCCCCCCC------CCC-ChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHH
Q 008146 411 KKRGA-KIYAEFRGGSFTSDAYHMTE------PHP-DGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQAL 482 (576)
Q Consensus 411 ~~~g~-~i~a~I~g~~~~~dg~~~~~------~~p-~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al 482 (576)
++.+. ++.++|+|++..++...... .++ .......+++++|+++|++++|||++|+|+..+. .|+..+
T Consensus 238 ~~l~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~Agi~~~Didv~el~D~fa~----~~l~~l 313 (403)
T PRK06289 238 RDYADARPIPRIKGWGHRTAPLGLEQKLDRSAGDPYVLPHVRQAVLDAYRRAGVGLDDLDGFEVHDCFTP----SEYLAI 313 (403)
T ss_pred HHhccCCCCEEEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCeEEeeeccchH----HHHHHH
Confidence 88775 67789999998766432211 111 2334567999999999999999999999999996 344333
Q ss_pred HHH-HcC---------------CCCccccccccc--ccccccchhHHHHHHHHHHHHc
Q 008146 483 IHC-FGQ---------------NRGLRVNSTKSM--IGHLLGAAGAVEAIAVVQAIRT 522 (576)
Q Consensus 483 ~~~-f~~---------------~~~~~v~s~K~~--iGH~~gAsG~~~li~~~l~L~~ 522 (576)
+.. |.. ...+|++..-+. .||+.||+|+.++++++.||+.
T Consensus 314 e~lGl~~~Ge~~~~v~~G~~~~~G~lpvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg 371 (403)
T PRK06289 314 DHIGLTGPGESWKAIENGEIAIGGRLPINPSGGLIGGGHPVGASGVRMLLDAAKQVTG 371 (403)
T ss_pred HHcCCCCCCcHHHHHhcCCcccCCCeeEcCCCCccccCCCccchHHHHHHHHHHHHhc
Confidence 322 111 123455555554 4999999999999999999996
|
|
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-20 Score=202.51 Aligned_cols=270 Identities=20% Similarity=0.294 Sum_probs=188.2
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
..|+.+++++||+|+|+++++|| +|++|+.... . .....+..++..+|
T Consensus 28 ~~L~~~A~~~Al~dAgl~~~dID-------~vi~g~~~~~------------------------~-~~~~~a~~v~~~lG 75 (426)
T PRK08170 28 SDLAVAAGRALLNRQPFAPDDLD-------EVILGCAMPS------------------------P-DEANIARVVALRLG 75 (426)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCC------------------------C-CcChHHHHHHHHhC
Confidence 57899999999999999998777 7888865310 0 01134567888999
Q ss_pred CC--CccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccc-hh---h---------------------------
Q 008146 316 WM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PI---G--------------------------- 362 (576)
Q Consensus 316 l~--Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~-p~---~--------------------------- 362 (576)
+. .|.++|+++|+|++.+|..|+++|++|.+|.+||+|+|.+.. |. .
T Consensus 76 l~~~~p~~~v~~~CaSg~~al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (426)
T PRK08170 76 CGEKVPAWTVQRNCASGMQALDSAAANIALGRADLVLAGGVEAMSHAPLLFSEKMVRWLAGWYAAKSIGQKLAALGKLRP 155 (426)
T ss_pred cCCCceeeeccchhhHHHHHHHHHHHHHHCCCCCEEEEEEEecccCCccccccccccchhccccccccCccccccccccc
Confidence 94 399999999999999999999999999999999999996532 10 0
Q ss_pred --------------------hHHHHHhhhhhcc----------------C--C------------------CCCC-----
Q 008146 363 --------------------LGGFVACRALSQR----------------N--N------------------DPTK----- 381 (576)
Q Consensus 363 --------------------~~~~~~~~~ls~~----------------~--~------------------~p~~----- 381 (576)
..++...+.+... + . +|..
T Consensus 156 ~~~~~~~~~~~g~~~~~~~~~~a~~a~~~~~~ygitre~~a~vav~s~~~a~~A~~~g~~~~i~pv~~~~~np~a~de~~ 235 (426)
T PRK08170 156 SYLAPVIGLLRGLTDPVVGLNMGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLKEVVPLFDRDGKFYDHDDGV 235 (426)
T ss_pred cccccccccCccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcceEeeeecCCCCeeccCCCC
Confidence 0000000000000 0 0 0000
Q ss_pred ----------CCCC-CccC------CCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHH
Q 008146 382 ----------ASRP-WDIN------RDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVI 444 (576)
Q Consensus 382 ----------~~rp-fd~~------~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~ 444 (576)
..+| |+.. .|...++|||+++||++++.|++.+.++.++|.+++...... ...+.+..
T Consensus 236 r~~~t~e~~~~~~~v~~~p~~~lt~~~~s~~~DGAaA~vl~s~e~A~~~~~~p~~~i~~~~~~~~~~-----~~~~~~~~ 310 (426)
T PRK08170 236 RPDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLGRIVDSQWAALDP-----SQMGLGPV 310 (426)
T ss_pred CCCCCHHHHhcCCCcccCCCCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEeeEeeeCc-----hhhcccHH
Confidence 1111 2201 345567999999999999999999988888999987754322 12233457
Q ss_pred HHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHH----H-----------cCCCCcccccccc--cccccccc
Q 008146 445 LCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHC----F-----------GQNRGLRVNSTKS--MIGHLLGA 507 (576)
Q Consensus 445 ~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~----f-----------~~~~~~~v~s~K~--~iGH~~gA 507 (576)
.+++++|+++|++++|||++|+|..++. .|+..+... | |.-...+|+-.-+ .+||+.||
T Consensus 311 ~a~~~al~~aGl~~~did~~ei~daFa~----~~l~~l~~le~lGf~~~G~g~~~~~G~~~~~pvN~~GG~la~GHP~GA 386 (426)
T PRK08170 311 HAATPLLQRHGLTLEDLDLWEINEAFAA----QVLACLAAWADEEYCREQLGLDGALGELDRERLNVDGGAIALGHPVGA 386 (426)
T ss_pred HHHHHHHHHcCCCHHHcCEEEecchhHH----HHHHHHHHhccccchhcccccccccCCCCcceecCCCCHHHhCCCccC
Confidence 8999999999999999999999998885 333222211 1 1001123433333 45999999
Q ss_pred hhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 508 AGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 508 sG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
+|+.+++.++.+|++. ..++++++...-||.-..+|||.
T Consensus 387 tG~~~~~~l~~~l~~~----------------------------~~~~g~~~~c~~gg~g~a~~~e~ 425 (426)
T PRK08170 387 SGARIVLHLLHALKRR----------------------------GTKRGIAAICIGGGQGGAMLLER 425 (426)
T ss_pred ccHHHHHHHHHHHHhh----------------------------CCCeEEEEEecCCChhheEEEEe
Confidence 9999999999999861 23567888888899999999985
|
|
| >PRK08142 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.5e-20 Score=197.44 Aligned_cols=246 Identities=20% Similarity=0.173 Sum_probs=170.6
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
..|+.+++.+||+|||+++++|| +++.+... +.. ....++..+|
T Consensus 26 ~~L~~eA~~~Al~DAgl~~~dID-------~~~~~~~~-------------------------~~~----~~~~~~~~lG 69 (388)
T PRK08142 26 AQLHAEVAKGALADAGLSLADVD-------GYFCAGDA-------------------------PGL----GPASMVDYLG 69 (388)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEcCCC-------------------------CCc----cHHHHHHhCC
Confidence 57899999999999999988666 44432110 000 0134778899
Q ss_pred CCC-ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchh---------------------------hhHHHH
Q 008146 316 WMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI---------------------------GLGGFV 367 (576)
Q Consensus 316 l~G-p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~---------------------------~~~~~~ 367 (576)
+++ |...++++|+|+..+|..|+++|++|.+|+|||+|+|.+.... .+..+.
T Consensus 70 l~~~~~~~v~~gg~s~~~a~~~A~~~I~sG~~d~vLvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~Al~ 149 (388)
T PRK08142 70 LKLRHVDSTETGGSSYLAHVGHAAQAIAAGKCSVALITLAGRPRSEGSSGTEPRNWGADAPDAPFEAPYGPTTHNLYAMC 149 (388)
T ss_pred CCCeeeccccCCcHHHHHHHHHHHHHHHcCCCCEEEEEeeeecccCCccccccccccccccccchhcccccccHHHHHHH
Confidence 976 7888999999999999999999999999999999988643110 001111
Q ss_pred HhhhhhccC------------------CCCCCC-CCCCcc--------------CCCcceecCceEEEEEcchHHHHhcC
Q 008146 368 ACRALSQRN------------------NDPTKA-SRPWDI--------------NRDGFVMGEGAGVLLLEELEHAKKRG 414 (576)
Q Consensus 368 ~~~~ls~~~------------------~~p~~~-~rpfd~--------------~~~G~v~gEGAaalvL~~~~~A~~~g 414 (576)
..+.+...+ .+|... .+|++. .-|...++||++++||.+++.|++.+
T Consensus 150 a~~ym~~yG~t~e~la~vav~~~~~A~~NP~A~~r~~~t~e~vl~s~~Ia~Pl~l~d~~~~~DGAaA~vl~s~~~A~~l~ 229 (388)
T PRK08142 150 AMRHMHEYGTTSEQLAWIKVAASHHAQHNPHAMLRDVVTVEDVLNSPMIADPLHRLDCCVVTDGGGALVVVRPEIARSLK 229 (388)
T ss_pred HHHHHHHHCcCHHHHHHHHHHHHHHhccCChhhcCCCCCHHHHhcCCcccCCchhhccCcccCceEEEEEecHHHHhhcC
Confidence 111111111 112211 112211 13556679999999999999998876
Q ss_pred CeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHH-Hc------
Q 008146 415 AKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHC-FG------ 487 (576)
Q Consensus 415 ~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~-f~------ 487 (576)
++.++|+|++..++..+...++........+++++|+++|++++|||++|+|+..|. .|...++.. |.
T Consensus 230 -~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGi~~~did~~elyD~Fs~----~~~~~~E~lGl~~~Ge~~ 304 (388)
T PRK08142 230 -RPLVKVLGAGEAIKGQMGGKVDLTYSGAAWSGPAAFAEAGVTPADIKYASIYDSFTI----TVLMQLEDLGFCKKGEGG 304 (388)
T ss_pred -CCCEEEEEEEEecCCccccCcccccHHHHHHHHHHHHHcCCCHHHCCEEEEeccchH----HHHHHHHHcCCCCCCchH
Confidence 455889999998776543334444456678999999999999999999999999996 344444322 10
Q ss_pred ----C------CCCccccccccc--ccccccchhHHHHHHHHHHHHc
Q 008146 488 ----Q------NRGLRVNSTKSM--IGHLLGAAGAVEAIAVVQAIRT 522 (576)
Q Consensus 488 ----~------~~~~~v~s~K~~--iGH~~gAsG~~~li~~~l~L~~ 522 (576)
. ...+||+..-+. .||+.+|+|+.+++++++||+.
T Consensus 305 ~~v~~g~~~~~~G~lPvN~sGG~l~~G~p~gatG~~~~~E~~~QLrG 351 (388)
T PRK08142 305 KFVADGNLISGVGKLPFNTDGGGLCNNHPANRGGMTKVIEAVRQLRG 351 (388)
T ss_pred HHHHCCCcccCCCCccccCCChhhcCCCcCcccHHHHHHHHHHHHcC
Confidence 1 123666444433 3899999999999999999986
|
|
| >PRK06365 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.2e-20 Score=197.70 Aligned_cols=290 Identities=18% Similarity=0.185 Sum_probs=185.5
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
..|+.+++.+||+|+|+++++|| +|++|..... ....+.....++..+|
T Consensus 38 ~eL~~eA~~~Al~dagl~~~dID-------~vv~~~~~~~------------------------~~g~~~~~~~~~~~lG 86 (430)
T PRK06365 38 RERVKKAFDYAMNDAGLTLADID-------GSVASYFSDH------------------------FQRQLLAGIMVQDYLG 86 (430)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC-------EEEEeccccc------------------------ccccchhhHHHHHhcC
Confidence 57899999999999999998776 6666642210 0011222234678899
Q ss_pred CCC-ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhh-------------------------hHHHHHh
Q 008146 316 WMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG-------------------------LGGFVAC 369 (576)
Q Consensus 316 l~G-p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~-------------------------~~~~~~~ 369 (576)
+.. |+++|+++|+|+..||..|++.|++|++|+|||+|+|.+..... +.++...
T Consensus 87 l~~~~~~~v~~~~aSg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~al~a~ 166 (430)
T PRK06365 87 LVPKPSKRIEGGGATGGLAFQAGYEEIASGRMDCVAVYGFETMSHVNTWKGNEFIALASDTNFDYPLGGFYTGYYAMMAV 166 (430)
T ss_pred CCCCceEEEeCCcHHHHHHHHHHHHHHHcCCCCEEEEEEeeecccccchhhhhhhcccccccccccccCccHHHHHHHHH
Confidence 976 89999999999999999999999999999999999997543110 0011111
Q ss_pred hhhhccCC------------------CCCCCC-CCCc--------------cCCCcceecCceEEEEEcchHHHHhcCCe
Q 008146 370 RALSQRNN------------------DPTKAS-RPWD--------------INRDGFVMGEGAGVLLLEELEHAKKRGAK 416 (576)
Q Consensus 370 ~~ls~~~~------------------~p~~~~-rpfd--------------~~~~G~v~gEGAaalvL~~~~~A~~~g~~ 416 (576)
+.+...+. +|.... .|.+ ...|...++|||+++||.+++.|++.+.+
T Consensus 167 ry~~~yG~t~e~la~vav~~~~~A~~NP~A~~~~~~t~e~v~~s~~i~~Plt~~d~~~~sDGAaAvvl~See~A~~l~~~ 246 (430)
T PRK06365 167 RHMYEFGTTVEQLAKVSVKNHGNAIHNPFAQSPMKITVEDVRKSPMVSYPLTRLDVCAMSDGAACAILASEDKAFEITDK 246 (430)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHhhCcHhhcCCCCCHHHHhcCCccccCcchhhcCCcCCceEEEEEecHHHHHhcCCC
Confidence 11111110 111100 1111 01244457899999999999999887765
Q ss_pred eeEEEEEEEEecCCCCCCC----C-------------------CCChHHHHHHHHHHHHHcCCC--CCCccEEEecCCCC
Q 008146 417 IYAEFRGGSFTSDAYHMTE----P-------------------HPDGVGVILCIEKALAHSGVS--REDVNYINAHATST 471 (576)
Q Consensus 417 i~a~I~g~~~~~dg~~~~~----~-------------------~p~~~~~~~ai~~AL~~Agl~--~~dId~ve~Hgtgt 471 (576)
+ ..|++++..+++..... + .........+++++|+++|++ ++|||++|+|+..+
T Consensus 247 p-v~i~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~AGl~~~~~DiD~~Ei~D~Fa 325 (430)
T PRK06365 247 P-VLIKAIGTGSDTLRLADRPFGEVPLLPNESPDDYKDLRYPGVHSFRAGRMAAKEAYEMAGITDPLNDLDLIELHDAYT 325 (430)
T ss_pred C-eEEEEEEEeccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcCCCCCHHHCCEEEeecCCc
Confidence 5 44666666554332111 0 012234468999999999998 89999999999988
Q ss_pred ccCcHHHHHHHHHH-HcC---------------CCCccccccccc--ccccccchhHHHHHHHHHHHHcCCCCCCCCCCC
Q 008146 472 PAGDIKEYQALIHC-FGQ---------------NRGLRVNSTKSM--IGHLLGAAGAVEAIAVVQAIRTGWIHPNINLEN 533 (576)
Q Consensus 472 ~~gD~~E~~Al~~~-f~~---------------~~~~~v~s~K~~--iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~ 533 (576)
. .|+..++.. |.. ..++||+..-+. .||+.||+|+.+++.+++||+..--+ . +
T Consensus 326 ~----~~l~~lE~lGl~~~Ge~~~~~~~G~~~~~G~~piNt~GG~la~Ghp~GatG~~~~~e~~~QLrG~a~~-~--~-- 396 (430)
T PRK06365 326 S----SEIQTYEDLGLCKYGEGGQFIESGKPELPGKLPVNPSGGLLAAGHAVGATGIMQAVFMFWQLQGRIKK-H--F-- 396 (430)
T ss_pred H----HHHHHHHHcCCCCCCchHHHHHCCCcCCCCCccccCCCchhcCCCcccHHHHHHHHHHHHHHhcccCC-C--C--
Confidence 5 444433322 111 012455544444 59999999999999999999963110 0 0
Q ss_pred CCCCCCcccccCCcccccCccEEEEeccC-CCcceeEEEEeeCC
Q 008146 534 PDAVVDTNVLVGPKKERLEVKAALSNSFG-FGGHNSSIIFSPYK 576 (576)
Q Consensus 534 p~~~~~~~~~~~~~~~~~~~~~alv~sfG-~gG~na~vil~~~~ 576 (576)
-....+-...++++++++| .|.++..+||++.|
T Consensus 397 ----------~~~~rQv~~a~~~l~~~~gg~~~~~~~~vl~~~~ 430 (430)
T PRK06365 397 ----------HDDYLQVKNAKRGLIHSHAGTGTYVTVTILEAPK 430 (430)
T ss_pred ----------CcccccCCCccEEEEecCCcccceEEEEEEecCC
Confidence 0000111235678888887 44567778888765
|
|
| >cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=99.86 E-value=2e-20 Score=199.06 Aligned_cols=281 Identities=20% Similarity=0.222 Sum_probs=180.1
Q ss_pred HHHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHH-HHHH
Q 008146 234 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSA-MLAM 312 (576)
Q Consensus 234 p~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~-~ia~ 312 (576)
....|+.+++++||+|+|+++++|| .|++|+....+. ....+. .+..
T Consensus 22 ~~~el~~~a~~~Al~~agl~p~dID-------~vi~g~~~~~~~-------------------------g~~~~~~~~~~ 69 (393)
T cd00826 22 LAHEAGAKAIAAALEPAGVAAGAVE-------EACLGQVLGAGE-------------------------GQNCAQQAAMH 69 (393)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEEccCCcc-------------------------cCcHHHHHHHH
Confidence 3467889999999999999998777 688887642211 011122 2455
Q ss_pred HhCCCC-ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhh-------------------------hHHH
Q 008146 313 DLGWMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG-------------------------LGGF 366 (576)
Q Consensus 313 ~lgl~G-p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~-------------------------~~~~ 366 (576)
.+|+.+ |+++|+++|+|++.||..|+++|++|++|++||+|+|.+..... +..+
T Consensus 70 ~lg~~~~p~~~V~~~Casg~~al~~A~~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~r~~~~~~a~~s~ 149 (393)
T cd00826 70 AGGLQEAPAIGMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETSAENNAKEKHIDVLINKYGMRACPDAFALAGQ 149 (393)
T ss_pred cCCCCCCcEEEecchhHHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccchhHHHHHHhCChhhccHHHHHHH
Confidence 677765 99999999999999999999999999999999999998643110 0011
Q ss_pred HHhhhhhcc-------------C--------CCCCCCC------------CCCc------cCCCcceecCceEEEEEcch
Q 008146 367 VACRALSQR-------------N--------NDPTKAS------------RPWD------INRDGFVMGEGAGVLLLEEL 407 (576)
Q Consensus 367 ~~~~~ls~~-------------~--------~~p~~~~------------rpfd------~~~~G~v~gEGAaalvL~~~ 407 (576)
.....+.+. + .+|.... +|.. ...|...++|||+++||.++
T Consensus 150 ~~~~~~~~~G~~~e~~a~v~~~~~~~~~~a~~np~a~~~~~~t~e~~~~~~~i~~~~~pl~~~~~~~~~DGAAA~vl~S~ 229 (393)
T cd00826 150 AGAEAAEKDGRFKDEFAKFGVKGRKGDIHSDADEYIQFGDEASLDEIAKLRPAFDKEDFLTAGNACGLNDGAAAAILMSE 229 (393)
T ss_pred HHHHHHHHcCCCHHHEEEEEEecCCCCEEEecCCCCCCCCCCCHHHHhcCCCccCCCCCEechhcCCcCCCeEEEEEecH
Confidence 111111111 1 0121111 1110 11233446899999999999
Q ss_pred HHHHhcCC-eeeEEEEEEEEecCCCC-CCCCC----CChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHH
Q 008146 408 EHAKKRGA-KIYAEFRGGSFTSDAYH-MTEPH----PDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQA 481 (576)
Q Consensus 408 ~~A~~~g~-~i~a~I~g~~~~~dg~~-~~~~~----p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~A 481 (576)
+.|++.+. ....+|.+.+...+... ...+. ....+...+++++|+++|++++|||++|+|..++. .|+..
T Consensus 230 ~~a~~l~l~~~~v~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~al~~Agi~~~DID~~Ei~d~Fa~----~~l~~ 305 (393)
T cd00826 230 AEAQKHGLQSKAREIQALEMITDMASTFEDKKVIKMVGGDGPIEAARKALEKAGLGIGDLDLIEAHDAFAA----NACAT 305 (393)
T ss_pred HHHHHcCCcccccccceEEEEEeeeccccCccccccccceeHHHHHHHHHHHcCCCHHHcCeeehhhhhHH----HHHHH
Confidence 99998774 22244555544433221 11122 23345679999999999999999999999998875 44444
Q ss_pred HHHH-HcC---------------CCCccccccccc--ccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccc
Q 008146 482 LIHC-FGQ---------------NRGLRVNSTKSM--IGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVL 543 (576)
Q Consensus 482 l~~~-f~~---------------~~~~~v~s~K~~--iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~ 543 (576)
++.. |.. ...+||+..-+. .||+.||+|+.+++.+++||+..-
T Consensus 306 ~e~lgl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~GhP~gAtG~~~~~e~~~qL~g~a------------------- 366 (393)
T cd00826 306 NEALGLCPEGQGGALVDRGDNTYGGKSIINPNGGAIAIGHPIGASGAAICAELCFELKGEA------------------- 366 (393)
T ss_pred HHHhCCCcccchhhhhhcCccccCCcceECCCCchhhcCCCccccHHHHHHHHHHHHhhhh-------------------
Confidence 4433 111 012455444444 599999999999999999998511
Q ss_pred cCCcccccCccEEEEeccCCCcceeEEEEe
Q 008146 544 VGPKKERLEVKAALSNSFGFGGHNSSIIFS 573 (576)
Q Consensus 544 ~~~~~~~~~~~~alv~sfG~gG~na~vil~ 573 (576)
...+....+++++++.| |..+++|++
T Consensus 367 --g~~q~~~~~~~~~~~~G--g~g~a~~~~ 392 (393)
T cd00826 367 --GKRQGAGAGLALLCIGG--GGGAAMCIE 392 (393)
T ss_pred --ccccCCCcCEEEEEcCC--CceeEEEEe
Confidence 00111235677777666 456667765
|
There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK06025 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.1e-20 Score=197.44 Aligned_cols=270 Identities=19% Similarity=0.256 Sum_probs=194.0
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
..|+..+.+++|+++|++++.|| -|++|+.... +.....++.+++...|
T Consensus 30 ~~L~~~~~~~~l~r~~i~~~~id-------~vi~G~~~~~------------------------g~~g~n~aR~~al~ag 78 (417)
T PRK06025 30 QHLAATVLKALAERNGLNTADVD-------DIIWSTSSQR------------------------GKQGGDLGRMAALDAG 78 (417)
T ss_pred HHHHHHHHHHHHHhcCCCHHHCC-------EEEEEcCCCc------------------------CcccCcHHHHHHHhCC
Confidence 45777889999999999998777 4899976311 1112346777888888
Q ss_pred C--CCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhh-H-----H----------------H--HHh
Q 008146 316 W--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGL-G-----G----------------F--VAC 369 (576)
Q Consensus 316 l--~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~-~-----~----------------~--~~~ 369 (576)
| +-|.+||+..|+||+.||.+|++.|+.|++|++|+||+|+|...+.+ . + + ..+
T Consensus 79 lp~~vp~~tvnr~C~Sgl~ai~~aa~~I~~G~~~~~laGG~EsmS~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~M 158 (417)
T PRK06025 79 YDIKASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTEMMSYTAAMAAEDMAAGKPPLGMGSGNLRLRALHPQSHQ 158 (417)
T ss_pred CCCCCCeeeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCcccccccccCCCCcccccccCcccccccCCCCH
Confidence 7 46999999999999999999999999999999999999998743211 0 0 0 000
Q ss_pred hhhhc-----------------------------------c--------C---CCCCCCCC------------C-Ccc--
Q 008146 370 RALSQ-----------------------------------R--------N---NDPTKASR------------P-WDI-- 388 (576)
Q Consensus 370 ~~ls~-----------------------------------~--------~---~~p~~~~r------------p-fd~-- 388 (576)
+..+. . + .+.|...| | |+.
T Consensus 159 g~~ae~~a~~~~isRe~~D~~A~~Sh~rA~~A~~~G~f~~eIvPv~~~~~~~~~~~De~~R~~~t~e~la~L~p~F~~~~ 238 (417)
T PRK06025 159 GVCGDAIATMEGITREALDALGLESQRRAARAIKEGRFDKSLVPVYRDDGSVALDHEEFPRPQTTAEGLAALKPAFTAIA 238 (417)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEeeEEcCCCCEEecCCCCCCCCCCHHHHcCCCCCccccc
Confidence 10000 0 0 00111111 2 432
Q ss_pred ----CCCcc-------------------------eecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCC
Q 008146 389 ----NRDGF-------------------------VMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD 439 (576)
Q Consensus 389 ----~~~G~-------------------------v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~ 439 (576)
..+|. .++|||+++||++++.|+++|.+++++|.|++...+.... .
T Consensus 239 ~~~~~~~g~~~~~~~~~~~~~~~~~~~vTagNss~~sDGAAAvVL~See~A~~lg~~p~a~I~g~~~a~~~p~~-----~ 313 (417)
T PRK06025 239 DYPLDDKGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHGLKPRARIVAMANMGDDPTL-----M 313 (417)
T ss_pred cccccCCccccccccccccccccccccccccccCCCCcceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchh-----h
Confidence 01343 3589999999999999999999999999999988654322 2
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCC-CCcccccccccccccccchhHHHHHHHHH
Q 008146 440 GVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQ 518 (576)
Q Consensus 440 ~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l 518 (576)
+.+...+++++|+++|++++|||++|.|...+. ...+..+.++-. .+++++..+..+||+.|++|+..++.++.
T Consensus 314 ~~~p~~Ai~~aL~~AGl~~~DID~~ei~eaFa~-----~~l~~~~~lg~~~~~vN~~GG~ia~GHp~GaTGa~~v~~ll~ 388 (417)
T PRK06025 314 LNAPVPAAKKVLAKAGLTKDDIDLWEINEAFAV-----VAEKFIRDLDLDRDKVNVNGGAIALGHPIGATGSILIGTVLD 388 (417)
T ss_pred cccHHHHHHHHHHHcCCCHHHCcEEEEchHHHH-----HHHHHHHHcCCChhhccccCCHHhcCCchhHHHHHHHHHHHH
Confidence 234468999999999999999999999865542 122333444422 45778888889999999999999999999
Q ss_pred HHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 519 AIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 519 ~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
+|+.. ..+.+++.-.+.||.-..+|||.
T Consensus 389 qL~~~----------------------------g~~~Gl~~~c~~GG~g~A~lle~ 416 (417)
T PRK06025 389 ELERR----------------------------GLKRGLVTMCAAGGMAPAIIIER 416 (417)
T ss_pred HHHHh----------------------------CCCeEEEEEEeeccceeEEEEEe
Confidence 99751 12445667778889999999985
|
|
| >TIGR02446 FadI fatty oxidation complex, beta subunit FadI | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.7e-20 Score=196.49 Aligned_cols=247 Identities=21% Similarity=0.306 Sum_probs=170.2
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
..|+.+++++||+|+|+++++|+ .|++|+..+. .....++..++...|
T Consensus 32 ~~L~~~a~~~al~~agl~~~~Id-------~vi~G~~~~~-------------------------~~~~~~ar~~~l~aG 79 (430)
T TIGR02446 32 VDLGKMVVSELLARSEIDPKLIE-------QLVFGQVVQM-------------------------PEAPNIAREIVLGTG 79 (430)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCc-------------------------CccchHHHHHHHhCC
Confidence 56899999999999999998776 5888865310 011235666677789
Q ss_pred CC-C-ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccc-hhhhH----------------H-----------
Q 008146 316 WM-G-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PIGLG----------------G----------- 365 (576)
Q Consensus 316 l~-G-p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~-p~~~~----------------~----------- 365 (576)
+. + |.++|+++|+||+.|+.+|+++|++|++|++||+|+|.+.. |..+. .
T Consensus 80 l~~~~p~~~V~~~CaSG~~A~~~a~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (430)
T TIGR02446 80 MNVHTDAYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGADSSSVLPIGVSKKLAASLVDLNKARTLGQKLKVFSRLGL 159 (430)
T ss_pred CCCCCchhhhhhhhhHHHHHHHHHHHHHHCCCCCEEEEeeeEcccCCcccccccccccccccccccccCccccccccchh
Confidence 86 4 99999999999999999999999999999999999999853 11000 0
Q ss_pred ---HH------------Hhhhhhc-----cC----------------------------------CCCCCCC-------C
Q 008146 366 ---FV------------ACRALSQ-----RN----------------------------------NDPTKAS-------R 384 (576)
Q Consensus 366 ---~~------------~~~~ls~-----~~----------------------------------~~p~~~~-------r 384 (576)
+. .++...+ .+ .+|.... |
T Consensus 160 ~~~~~~~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~a~~A~~~g~~~~ei~p~~~np~a~~~~~D~~~r 239 (430)
T TIGR02446 160 KDLMPVPPAVAEYSTGLSMGQTAEQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFPPPYKQWIAEDNNIR 239 (430)
T ss_pred hhhcccCcccccccCCCcHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceeeeeeecCCceEecccCCCC
Confidence 00 0000000 00 0111000 1
Q ss_pred ------------C-Cc------cCCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHH
Q 008146 385 ------------P-WD------INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVIL 445 (576)
Q Consensus 385 ------------p-fd------~~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ 445 (576)
| |+ ...|...++||++++||.+++.|++.+.++.++|++++........ . .......
T Consensus 240 ~~~t~e~~~~~~~i~~p~~g~lt~~~~~~~~DGAaA~il~se~~A~~l~~~p~~~i~~~~~~~~~~~~-~---~~~~~~~ 315 (430)
T TIGR02446 240 HNSTLAGYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGYIRSYAFTAIDVWQ-D---MLMGPSY 315 (430)
T ss_pred CCCCHHHHhcCCceecCCCCceechhcCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEeeccCchH-h---hcccHHH
Confidence 1 11 1234455799999999999999999888888899998866321100 0 1122357
Q ss_pred HHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHH----HcCC-------------CCcccccccccccccccch
Q 008146 446 CIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHC----FGQN-------------RGLRVNSTKSMIGHLLGAA 508 (576)
Q Consensus 446 ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~----f~~~-------------~~~~v~s~K~~iGH~~gAs 508 (576)
+++++|+++|++++|||++|+|..++. .|+..++.. |-.. .+++++..--..||+.||+
T Consensus 316 a~~~al~~Agl~~~Did~~Ei~daFa~----~~l~~~e~lg~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gat 391 (430)
T TIGR02446 316 ATPLALQRAGLALSDLTLIDMHEAFAA----QTLANVQMFASDKFAQENLGRSKAMGEIDMSKFNVLGGSIAYGHPFAAT 391 (430)
T ss_pred HHHHHHHHcCCCHHHCCEEEeccccHH----HHHHHHHHhcCcchhhhcccccccCCCCCCCccCCCCCHHhcCCCcccc
Confidence 999999999999999999999999986 444444433 1100 1333344344469999999
Q ss_pred hHHHHHHHHHHHHc
Q 008146 509 GAVEAIAVVQAIRT 522 (576)
Q Consensus 509 G~~~li~~~l~L~~ 522 (576)
|+.+++.++.||+.
T Consensus 392 G~~~v~e~~~qL~g 405 (430)
T TIGR02446 392 GARMITQTLRELKR 405 (430)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999999985
|
This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli. |
| >PRK06066 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.5e-19 Score=189.18 Aligned_cols=277 Identities=17% Similarity=0.190 Sum_probs=181.3
Q ss_pred HHHHHHHHHHHHHhCC-CCh-hhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHH
Q 008146 236 MLYLLTAGKKALADGG-ITE-DVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 313 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAG-i~~-~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~ 313 (576)
..|+.+++++||+||| +++ ++|| ++++++. ..+. . .......++..
T Consensus 26 ~eL~~eA~~~Al~DAG~l~~~~dId-------~~~~~~~-~~~~----------------------~--~~~~~~~~~~~ 73 (385)
T PRK06066 26 REMMFEAASRAYKDAGNINPRRDVD-------SFISCQE-DFWE----------------------G--IAIADEFAPDQ 73 (385)
T ss_pred HHHHHHHHHHHHHhcCCCCChhcCC-------EEEEecC-cccC----------------------c--ccccchhHHHH
Confidence 5689999999999999 986 5666 6776531 1000 0 00111235567
Q ss_pred hCCC-CccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccc------------------h------hhhHHHHH
Q 008146 314 LGWM-GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI------------------P------IGLGGFVA 368 (576)
Q Consensus 314 lgl~-Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~------------------p------~~~~~~~~ 368 (576)
+|+. .|.+.| |+|+..+++.|+++|++|.+|+|||.|++.+.. | ..+.++..
T Consensus 74 lg~~~~~~~~v---~~sg~~a~~~A~~aV~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~p~~~~al~a 150 (385)
T PRK06066 74 IGGAMRPTMTV---AGDGLQGLAHAVMHINSGLANVVVVEAHSKPSDILTFSDVVKFAMDPIYVRPIGPPNPHFIAGLDA 150 (385)
T ss_pred cccCCCCeEEE---eCcHHHHHHHHHHHHHcCCCCEEEEEEEeeccCccchhhhhhcccCcceecccCCCcHHHHHHHHH
Confidence 8885 477776 889999999999999999999999999985422 1 11122222
Q ss_pred hhhhhccCC------------------CCCCCC-CCCcc--------------CCCcceecCceEEEEEcchHHHHhcCC
Q 008146 369 CRALSQRNN------------------DPTKAS-RPWDI--------------NRDGFVMGEGAGVLLLEELEHAKKRGA 415 (576)
Q Consensus 369 ~~~ls~~~~------------------~p~~~~-rpfd~--------------~~~G~v~gEGAaalvL~~~~~A~~~g~ 415 (576)
.+.+.+.+. +|.... +|.+. ..|...++|||+++||.+.+.|++.+.
T Consensus 151 ~rym~~yG~t~E~lA~Vavk~r~nA~~NP~A~~r~~~t~edvl~S~~ia~Pl~~~d~~~~~DGAaAvvl~s~~~a~~l~~ 230 (385)
T PRK06066 151 VKFMSRKGITREDLALVVEKNKKAGLSNPRASYASNISLEDVLSSEYVVYPLTELDIAPFVDGAIVVVLASEEVAKKLTD 230 (385)
T ss_pred HHHHHHHCcCHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCchhhccCCCCCceEEEEEeCHHHHHhcCC
Confidence 233322211 122111 11111 135566899999999999999998877
Q ss_pred eeeEEEEEEEEecCCCCCCCCCC-ChHHHHHHHHHHHHHcCCC--CCCccEEEecCCCCccCcHHHHHHHHHH-HcC---
Q 008146 416 KIYAEFRGGSFTSDAYHMTEPHP-DGVGVILCIEKALAHSGVS--REDVNYINAHATSTPAGDIKEYQALIHC-FGQ--- 488 (576)
Q Consensus 416 ~i~a~I~g~~~~~dg~~~~~~~p-~~~~~~~ai~~AL~~Agl~--~~dId~ve~Hgtgt~~gD~~E~~Al~~~-f~~--- 488 (576)
++. +|+|++..++......... .......+.+++|+++|++ ++|||++|+|+..|. .|+..++.. |..
T Consensus 231 ~pv-~I~g~g~~~~~~~~~~~~~~~~~~~~~Aa~~a~~~AGi~~p~~DiD~~ei~D~Ft~----~~l~~~e~lG~~~~Ge 305 (385)
T PRK06066 231 DPV-WIKGIGWSTESSNLETAELGKANYMRIAADMAYKMAGIESPRKEVDAAEVDDRYSY----KELQHIEALRLSEEPE 305 (385)
T ss_pred CCE-EEEEEEEecCCcccccccccccHHHHHHHHHHHHHcCCCCCHHHCcEEEEecCChH----HHHHHHHHcCCCCCCc
Confidence 765 8999988765332211111 2333457999999999998 799999999999986 343333322 111
Q ss_pred ------------CCCccccccccc--ccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCcc
Q 008146 489 ------------NRGLRVNSTKSM--IGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVK 554 (576)
Q Consensus 489 ------------~~~~~v~s~K~~--iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~ 554 (576)
..++||+..-+. .||+.||+|+.+++++++||+..- ...| ...+
T Consensus 306 ~~~~v~~G~~~~~G~~PvN~~GG~la~Ghp~gatG~~~v~e~~~QL~g~A---------------------g~rQ-~~a~ 363 (385)
T PRK06066 306 KDSLLREGNFDPQGELPVNPSGGHLAKGVPLEASGLSLLLDAVEYLRGEA---------------------GARQ-GKAE 363 (385)
T ss_pred hHHHHHCCCCCCCCCccccCCCchhcCCCccchhHHHHHHHHHHHHcccc---------------------cccC-CCCc
Confidence 123555544444 499999999999999999998621 1122 3467
Q ss_pred EEEEeccC--CCcceeEEEEee
Q 008146 555 AALSNSFG--FGGHNSSIIFSP 574 (576)
Q Consensus 555 ~alv~sfG--~gG~na~vil~~ 574 (576)
++++.+.| ++++.+.+|+|+
T Consensus 364 ~~l~~~~gg~~~~~~~v~v~~~ 385 (385)
T PRK06066 364 RAVVASWRGIPTLTGSVVVVER 385 (385)
T ss_pred EEEEcCCCccCCccEEEEEEeC
Confidence 78887776 556777777764
|
|
| >PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.83 E-value=9.4e-20 Score=193.28 Aligned_cols=252 Identities=18% Similarity=0.188 Sum_probs=168.7
Q ss_pred HHHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHH
Q 008146 234 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 313 (576)
Q Consensus 234 p~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~ 313 (576)
....|+.+++.+||+++|+++++|+ .|++++.... ......+..++..
T Consensus 94 ~~~~la~~Aa~~aL~~agl~~~~Id-------~li~~~~~~~-------------------------~~~p~~a~~v~~~ 141 (372)
T PRK07515 94 IQAEMGVAAARQALARAGRTAEDID-------AVIVACSNMQ-------------------------RAYPAMAIEIQQA 141 (372)
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEECCCCC-------------------------CCCcHHHHHHHHh
Confidence 4467999999999999999998665 5777764211 1112246778899
Q ss_pred hCCCCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcc
Q 008146 314 LGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGF 393 (576)
Q Consensus 314 lgl~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~ 393 (576)
||+++++++++.+|+|++.||..|+++|++|.+|.|||+|+|.+.... -|+....++
T Consensus 142 Lgl~~~~~~v~~aCasg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~-----------------------~~~d~~~~~ 198 (372)
T PRK07515 142 LGIEGFAFDMNVACSSATFGIQTAANAIRSGSARRVLVVNPEICSGHL-----------------------NFRDRDSHF 198 (372)
T ss_pred cCCCCcEEEecchhHHHHHHHHHHHHHHHcCCCCEEEEEeeecccccc-----------------------cccCCCCCE
Confidence 999999999999999999999999999999999999999999732110 022233679
Q ss_pred eecCceEEEEEcchHHHHhcC-CeeeEEEEEE------------EEecCCCCCCCCCC----ChHH--------HHHHHH
Q 008146 394 VMGEGAGVLLLEELEHAKKRG-AKIYAEFRGG------------SFTSDAYHMTEPHP----DGVG--------VILCIE 448 (576)
Q Consensus 394 v~gEGAaalvL~~~~~A~~~g-~~i~a~I~g~------------~~~~dg~~~~~~~p----~~~~--------~~~ai~ 448 (576)
++||||+|+||++.+.+.+++ ..++...... ....+..+...+.. ++.. ..++|+
T Consensus 199 lfGDgAaA~vL~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~ 278 (372)
T PRK07515 199 IFGDVATAVIVERADTATSAGGFEILGTRLFTQFSNNIRNNFGFLNRADPEGIGARDKLFVQEGRKVFKEVCPMVAEHIV 278 (372)
T ss_pred EecCccEEEEEeeccccccCCCceEEEEEeecccccceecCCCCCCCCCccccccccceEEeccHHHHHHHHHHHHHHHH
Confidence 999999999999876553222 2454443111 00001111111111 2222 568999
Q ss_pred HHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCC-CcccccccccccccccchhHHHHHHHHHHHHcCCCCC
Q 008146 449 KALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHP 527 (576)
Q Consensus 449 ~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~-~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp 527 (576)
++|+++|++++|||||.+|.+++.+.|.+ ++++|+... .-.....-..+||+.+|+=.+.|-.. . +.+
T Consensus 279 ~~L~~~gl~~~dId~~~~Hq~~~~~~d~~----~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~~----~-~~~-- 347 (372)
T PRK07515 279 EHLAENGLTPADVKRFWLHQANINMNQLI----GKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHKH----S-DDL-- 347 (372)
T ss_pred HHHHHcCCCHHHCCEEEECCCCHHHHHHH----HHHhccCCCChhhceEeHHhcCCchhhHHHHHHHHH----h-ccC--
Confidence 99999999999999999999999988865 344455321 11112234567999888755444332 1 111
Q ss_pred CCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 528 NINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 528 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
.+-+.++..+||.|-+-..++|++
T Consensus 348 -----------------------~~Gd~vll~~~G~G~~~~~~ll~~ 371 (372)
T PRK07515 348 -----------------------AAGDLGVICSFGAGYSIGSVIVRK 371 (372)
T ss_pred -----------------------CCCCEEEEEEecccHHHHHHHhcc
Confidence 012456677898887777777664
|
|
| >PRK09268 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.4e-19 Score=188.98 Aligned_cols=276 Identities=18% Similarity=0.212 Sum_probs=185.0
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHH--
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD-- 313 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~-- 313 (576)
..|+.++++++|+|+|+++++|| .|++|+..+.. .....+..++..
T Consensus 32 ~eL~~~a~~~al~~agl~~~~Id-------~vv~G~~~~~~-------------------------~~~~~~r~~~l~~g 79 (427)
T PRK09268 32 QDMLTAALDGLVDRFGLQGERLG-------EVVAGAVLKHS-------------------------RDFNLTRECVLGSA 79 (427)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccCC-------------------------ccccHHHHHHHHcC
Confidence 56899999999999999998777 68888754210 001134444444
Q ss_pred hCCCCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhh-hH----------------------------
Q 008146 314 LGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG-LG---------------------------- 364 (576)
Q Consensus 314 lgl~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~-~~---------------------------- 364 (576)
++...|.++|+++|+||+.|+..|+++|++|.+|++||||+|.+..... +.
T Consensus 80 l~~~~p~~~V~~~CaSG~~ai~~A~~~I~sG~~d~vlvgG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (427)
T PRK09268 80 LSPYTPAYDLQQACGTGLEAAILVANKIALGQIDSGIAGGVDTTSDAPIAVNEGLRKILLELNRAKTTGDRLKALGKLRP 159 (427)
T ss_pred CCCCCceeeeechhhHHHHHHHHHHHHHHCCCCCEEEEeeEEccCCCcccccccccccccccccccccCccccccccccc
Confidence 4445799999999999999999999999999999999999998753210 00
Q ss_pred --------H----H--HHhhhhhc-----c-----------------------------CCCCC------CCCC------
Q 008146 365 --------G----F--VACRALSQ-----R-----------------------------NNDPT------KASR------ 384 (576)
Q Consensus 365 --------~----~--~~~~~ls~-----~-----------------------------~~~p~------~~~r------ 384 (576)
. + ..++.+.. . ...|. ...|
T Consensus 160 ~~~~~~~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~A~~A~~~g~~~~einP~~~~~~D~~~r~~~t~e 239 (427)
T PRK09268 160 KHLAPEIPRNGEPRTGLSMGEHAAITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPFLGLTRDNNLRPDSSLE 239 (427)
T ss_pred ccccccCccccccccCCcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccCccCcccCCCCCCCCCHH
Confidence 0 0 00110000 0 00222 1111
Q ss_pred ------C-Ccc-------CCCcceecCceEEEEEcchHHHHhcCCeeeEEE-EEEEEecCCCCCCCCCCChHHHHHHHHH
Q 008146 385 ------P-WDI-------NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEF-RGGSFTSDAYHMTEPHPDGVGVILCIEK 449 (576)
Q Consensus 385 ------p-fd~-------~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I-~g~~~~~dg~~~~~~~p~~~~~~~ai~~ 449 (576)
| |+. ..|...+.|||+++||.+.+.|++.+.++..+| .+....++..+.. .....+...++++
T Consensus 240 ~l~~~~~v~~p~~~g~lt~~n~~~~~DGAaAvvl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~~--~~~~~~~~~a~~~ 317 (427)
T PRK09268 240 KLAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAYLVDAETAAVDFVHGK--EGLLMAPAYAVPR 317 (427)
T ss_pred HHhCCCcccccCCCCceeccccCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEEcCCccccc--chhhccHHHHHHH
Confidence 2 222 123344789999999999999999888887666 5555555532111 1112345679999
Q ss_pred HHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHH-H-----------cCCCCccccccccc--ccccccchhHHHHHH
Q 008146 450 ALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHC-F-----------GQNRGLRVNSTKSM--IGHLLGAAGAVEAIA 515 (576)
Q Consensus 450 AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~-f-----------~~~~~~~v~s~K~~--iGH~~gAsG~~~li~ 515 (576)
+|+++|++++|||++|+|..++.. -..|+..+... | |....+||+..-+. +||+.||+|+..+++
T Consensus 318 a~~~AGl~~~Did~~Ei~d~Fa~~-~l~~l~~~e~lG~~~~g~g~~~~~G~~~~~pvN~~GG~la~GhP~gATG~~~v~e 396 (427)
T PRK09268 318 LLARNGLTLQDFDFYEIHEAFASQ-VLATLKAWEDEEYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAATGGRIVAT 396 (427)
T ss_pred HHHHcCCCHHHCCEEEeccccHHH-HHHHHHHhhhccccccccccccccCcCCCcccCCCcCHHhcCCCcccchHHHHHH
Confidence 999999999999999999998852 22233333211 0 10112445444444 599999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 516 VVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 516 ~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
++.||+.. ..++++++...-||.-..+|||.
T Consensus 397 ~~~QL~~~----------------------------~~~~gl~~~c~~gG~g~a~~~e~ 427 (427)
T PRK09268 397 LAKLLAEK----------------------------GSGRGLISICAAGGQGVTAILER 427 (427)
T ss_pred HHHHHHhc----------------------------CCCEEEEEEcccCchheEEEEeC
Confidence 99999851 23568888888899999999874
|
|
| >PRK06690 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=7e-19 Score=184.20 Aligned_cols=265 Identities=19% Similarity=0.241 Sum_probs=184.9
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
..|+..+.+++++ |++ ++|| .|++|+..+.. ...+..++...|
T Consensus 26 ~~L~~~a~~~~~~--gi~-~~Id-------~vi~G~~~~~~---------------------------~~~~r~~~~~~G 68 (361)
T PRK06690 26 QQLAAPLLTFLSK--GME-REID-------DVILGNVVGPG---------------------------GNVARLSALEAG 68 (361)
T ss_pred HHHHHHHHHHHHc--cch-hhcC-------EEEEEecCCCc---------------------------chHHHHHHHHcC
Confidence 5677788888744 885 5566 68998753211 122445777888
Q ss_pred CC-C-ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhh-----h---------HHHHHhhhhhccC---
Q 008146 316 WM-G-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG-----L---------GGFVACRALSQRN--- 376 (576)
Q Consensus 316 l~-G-p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~-----~---------~~~~~~~~ls~~~--- 376 (576)
+. + |+++|+++|+||+.|+..|+++|++|++|++||||+|.+..... + .+......+.+.+
T Consensus 69 l~~~~p~~tV~~~CaSG~~Ai~~a~~~I~sG~~d~~l~gG~E~ms~~p~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitr 148 (361)
T PRK06690 69 LGLHIPGVTIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSPFQNRARFSPETIGDPDMGVAAEYVAERYNITR 148 (361)
T ss_pred CCCCCCceehhhhhhHHHHHHHHHHHHHHCCCCCEEEEeccccccCCCcccccccCcccccCccHHHHHHHHHHHhCCCH
Confidence 86 4 99999999999999999999999999999999999998864210 0 0000000000000
Q ss_pred ------------------CCCC-------------CCC-------------CC-Ccc-----CCCcceecCceEEEEEcc
Q 008146 377 ------------------NDPT-------------KAS-------------RP-WDI-----NRDGFVMGEGAGVLLLEE 406 (576)
Q Consensus 377 ------------------~~p~-------------~~~-------------rp-fd~-----~~~G~v~gEGAaalvL~~ 406 (576)
.+|. ... +| |+. ..+...++|||+++||++
T Consensus 149 e~~d~~A~~s~k~a~~a~~n~~~~~ei~~v~~~~d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~~~~~~~DGAaAvvl~s 228 (361)
T PRK06690 149 EMQDEYACLSYKRTLQALEKGYIHEEILSFNGLLDESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACAVLVME 228 (361)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCceecccCccccccCCCCCHHHHhhcCCCcccCCCceeccccCCCCCCeEEEEEec
Confidence 0010 001 12 221 123334689999999999
Q ss_pred hHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHH
Q 008146 407 LEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCF 486 (576)
Q Consensus 407 ~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f 486 (576)
++.|++.|.++.++|.|++...... .....+...+++++|+++|++++|||++|+|...+. .+...+ +.+
T Consensus 229 ~e~A~~lg~~p~~~i~~~~~~~~~~-----~~~~~~~~~a~~~al~~Agl~~~Did~~ei~eafa~----~~~~~~-e~l 298 (361)
T PRK06690 229 EGQARKLGYKPVLRFVRSAVVGVDP-----NLPGTGPIFAVNKLLNEMNMKVEDIDYFEINEAFAS----KVVACA-KEL 298 (361)
T ss_pred HHHHHHcCCCceEEEEEEEEeccCc-----ccchhHHHHHHHHHHHHcCCCHHHcCEeeecchhHH----HHHHHH-Hhc
Confidence 9999999999988999988764321 122456788999999999999999999999988774 232222 233
Q ss_pred cC-CCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCc
Q 008146 487 GQ-NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGG 565 (576)
Q Consensus 487 ~~-~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG 565 (576)
+- ..++++++.+..+||+.|++|+.+++.++.+|++. ..++.+.+...-||
T Consensus 299 gl~~~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql~~~----------------------------~~~~g~~~~c~~gG 350 (361)
T PRK06690 299 QIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQAKRE----------------------------DMKYGIATLGIGGG 350 (361)
T ss_pred CCCchhcccCCcHHhccCchhhhHHHHHHHHHHHHHHh----------------------------CCCEEEEEEcccCc
Confidence 32 23466777777789999999999999999999751 23567777778888
Q ss_pred ceeEEEEeeC
Q 008146 566 HNSSIIFSPY 575 (576)
Q Consensus 566 ~na~vil~~~ 575 (576)
.-..+|||.-
T Consensus 351 ~g~a~~~e~~ 360 (361)
T PRK06690 351 IGLALLFEKV 360 (361)
T ss_pred ceeEEEEEec
Confidence 8889999864
|
|
| >PRK07937 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=5e-17 Score=170.01 Aligned_cols=266 Identities=15% Similarity=0.134 Sum_probs=168.9
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
...|+.+++.+||+|||+++++|| +++.+.. +.- .... .....+...+
T Consensus 24 ~~el~~eA~~~Al~DAgl~~~dID-------~~~~~~~--~~~---------------------~~~~--~~~~~~~~~~ 71 (352)
T PRK07937 24 GVEMLMPCFAELYAELGITKSDIG-------FWCSGSS--DYL---------------------AGRA--FSFISAIDSI 71 (352)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEcc--ccc---------------------cccc--cchhhHHhhc
Confidence 357899999999999999998666 5543321 000 0000 0011234456
Q ss_pred CCC-C-ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccc-----------------hh-----hhHHHHHhh
Q 008146 315 GWM-G-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-----------------PI-----GLGGFVACR 370 (576)
Q Consensus 315 gl~-G-p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~-----------------p~-----~~~~~~~~~ 370 (576)
|+. + |...++ ++|..||+.|+.+|++|.+|+|||.|+|.+.. |. .+.++...+
T Consensus 72 G~~~~~~~~~v~---~~g~~a~~~A~~aI~sG~~d~VLv~g~~k~~~~~~~~~~~~~~~~~~~~p~G~~~~~~~Al~a~~ 148 (352)
T PRK07937 72 GAVPPINESHVE---MDAAWALYEAWVKLLTGEVDTALVYGFGKSSAGTLRRVLALQLDPYTVAPLWPDSVSMAGLQARA 148 (352)
T ss_pred cCCCCCceEEec---CcHHHHHHHHHHHHhcCCCCEEEEEEecccCccchhhhhhccCCcceeccCCCchHHHHHHHHHH
Confidence 763 3 455555 46888999999999999999999999986421 11 011222222
Q ss_pred hhhccCC------------------CCCCCCCCCcc--------------CCCcceecCceEEEEEcchHHHHhcCCeee
Q 008146 371 ALSQRNN------------------DPTKASRPWDI--------------NRDGFVMGEGAGVLLLEELEHAKKRGAKIY 418 (576)
Q Consensus 371 ~ls~~~~------------------~p~~~~rpfd~--------------~~~G~v~gEGAaalvL~~~~~A~~~g~~i~ 418 (576)
.+.+.+. +|....| ++. .-|...++||++++||.+.+.|++.+.++
T Consensus 149 ym~~yG~t~e~lA~vavk~r~nA~~NP~A~~r-it~edvl~s~~ia~PL~l~d~~~~~DGAaA~vl~s~~~A~~l~~~p- 226 (352)
T PRK07937 149 GLDAGKWTEEQMAEVAARSRADARRNPSAEPS-ISVDELLARPYFADPLRRHDIAPITDGAAAVVLAAGDRARELRERP- 226 (352)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHhhCchhhcc-CCHHHHhcCCcccCCchhhcCCCCCCcceEEEEecHHHHHHcCCCc-
Confidence 2222111 2322222 111 13455679999999999999999988777
Q ss_pred EEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHH-cCCCCCCccEEEecCCCCccCcHHHHHHHHHH-HcCCCCccc-c
Q 008146 419 AEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAH-SGVSREDVNYINAHATSTPAGDIKEYQALIHC-FGQNRGLRV-N 495 (576)
Q Consensus 419 a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~-Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~-f~~~~~~~v-~ 495 (576)
++|+|++..++.......+.. ...++++++++ +|++|+|||++|+|+..+. .|+..++.. |..+.+++. +
T Consensus 227 v~I~g~~~~~~~~~~~~~d~~---~~~~~~~a~~~aAgi~~~diD~~Ei~D~F~~----~~l~~~e~lGl~g~~pvN~~G 299 (352)
T PRK07937 227 AWITGIEHRIESPSLGARDLT---RSPSTALAAEAATGGDAGGVDVAELHAPFTH----QELILREALGLGDKTKVNPSG 299 (352)
T ss_pred EEEEEEEEeeCCccccccccc---cHHHHHHHHHHhcCCCHHHCCEEEEeCCChH----HHHHHHHHcCCCCCCCcCCCc
Confidence 899999987765433211111 13445566666 4999999999999999986 444444333 222223333 3
Q ss_pred cccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCC--CcceeEEEEe
Q 008146 496 STKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGF--GGHNSSIIFS 573 (576)
Q Consensus 496 s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~--gG~na~vil~ 573 (576)
+.++ ||+.||+|+.+++++++||+.+ ..+++++++.|. +.+++.+|++
T Consensus 300 G~l~--ghp~gatG~~~~~e~~~QL~g~----------------------------~a~~~l~~~~Gg~~~~~~~v~v~~ 349 (352)
T PRK07937 300 GALA--ANPMFAAGLERIGEAARHIWDG----------------------------SARRALAHATSGPALQQNLVAVLE 349 (352)
T ss_pred cchh--cCchhHHHHHHHHHHHHHHhcc----------------------------CCCEEEEecccccccceEEEEEEe
Confidence 3343 9999999999999999999874 146788887764 3455556665
Q ss_pred e
Q 008146 574 P 574 (576)
Q Consensus 574 ~ 574 (576)
.
T Consensus 350 ~ 350 (352)
T PRK07937 350 G 350 (352)
T ss_pred c
Confidence 4
|
|
| >KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.5e-19 Score=173.03 Aligned_cols=244 Identities=22% Similarity=0.278 Sum_probs=171.2
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
..+|.-.+.+.||+++.+++.+.+ -||+|+.. +......++.+.+.--
T Consensus 30 A~~Lgsvaikaalera~v~~~~v~-------eVi~GnVl-------------------------~AnlGQapaRQaalgA 77 (396)
T KOG1390|consen 30 ATELGSVAIKAALERAVVPPSDVA-------EVIFGNVL-------------------------SANLGQAPARQAALGA 77 (396)
T ss_pred hhhHHHHHHHHHHHhcCCCHHHhh-------hhhhcccc-------------------------ccccCcchHHHHHhhc
Confidence 567889999999999999887544 27777542 2234455677788777
Q ss_pred CC--CCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhH------------------------HHHH
Q 008146 315 GW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLG------------------------GFVA 368 (576)
Q Consensus 315 gl--~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~------------------------~~~~ 368 (576)
|| .-|+.||+--|+||+.|+.+|+|.|+.|..|++++||.|+|...+.+. .|.+
T Consensus 78 Glp~sv~~tTvNkvCaSgmKAv~laaQsI~~G~~divVaGGmEsMS~vP~~~~~R~g~~~G~~~l~Dgi~~DGL~D~y~~ 157 (396)
T KOG1390|consen 78 GLPYSVPATTVNKVCASGMKAVILAAQSIQTGHADIVVAGGMESMSNVPYLYVARGGVKYGGVQLVDGIVKDGLTDAYDK 157 (396)
T ss_pred CCCcceeeEeehhhhhhhHHHHHHHHHHHhcCCccEEEecccchhccCcchhhhccCcCcCCeeeeechhhcchHHHhcc
Confidence 77 459999999999999999999999999999999999999987544110 0000
Q ss_pred h--h-----------------------------------hhhcc----------C---CCCCC------------CCCCC
Q 008146 369 C--R-----------------------------------ALSQR----------N---NDPTK------------ASRPW 386 (576)
Q Consensus 369 ~--~-----------------------------------~ls~~----------~---~~p~~------------~~rpf 386 (576)
. | .+... + .+.|+ ..||.
T Consensus 158 ~~MG~~aE~~a~~~~ItRe~QD~yAI~Sy~r~~~Aq~~g~f~~EIVPV~V~~~rg~~~v~~DEe~~k~~~~~~~~~l~~v 237 (396)
T KOG1390|consen 158 CHMGICAENTAKKYQITREEQDAYAIESYKRSENAQKAGKFDKEIVPVEVKTKRGETVVKKDEEPKKGSNIEKLSKLRPV 237 (396)
T ss_pred CCcchhHhhhHHHhCCcHhhhhhHHHHhHHHHHHHHhcCCCCCceeeEEEecCCCcEEeccchhhhcccchhhhccccce
Confidence 0 0 00000 0 00000 01121
Q ss_pred ccCCCcc-------eecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 008146 387 DINRDGF-------VMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRE 459 (576)
Q Consensus 387 d~~~~G~-------v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~ 459 (576)
-...+|. .+.|||+|+||.+.+.+.+.|.+|+++|.+|+-.... |..-..+...++.++|+++|+..+
T Consensus 238 F~~~ggTVTaaNAS~lnDGAAAvvL~s~e~~~~~glkPLArIv~~~dAa~~-----P~df~iaP~laipk~lk~aG~~~s 312 (396)
T KOG1390|consen 238 FKEDGGTVTAANASTLNDGAAAVVLMSGEAAKELGLKPLARIVAWGDAATE-----PIDFTIAPALAIPKALKKAGLEQS 312 (396)
T ss_pred eecCCCeeccccccccCccceeeEEechhhHhHcCCchHHHHhhhhhhccC-----hhhcccchHHHHHHHHHHcCcchh
Confidence 1122333 3679999999999999999999999999999854221 111122346899999999999999
Q ss_pred CccEEEecCCCCccCcHHHHH--HHHHHHcCC-CCcccccccccccccccchhHHHHHHHHHHHHc
Q 008146 460 DVNYINAHATSTPAGDIKEYQ--ALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRT 522 (576)
Q Consensus 460 dId~ve~Hgtgt~~gD~~E~~--Al~~~f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~ 522 (576)
||||+|.+ +..-.. |..+.++-+ ..+++....-.+|||+|+||+.-++..+..|+.
T Consensus 313 dVd~~EiN-------EAFs~v~lA~iK~LgldP~kVNv~GGAValGHPlG~SGaRi~~tL~~~L~~ 371 (396)
T KOG1390|consen 313 DVDYWEIN-------EAFSVVVLANIKKLGLDPSKVNVHGGAVALGHPLGMSGARILVTLLHTLEQ 371 (396)
T ss_pred hhhHHhhh-------hhhhHHHHHHHHHhCCCHhhccCCCceeecCCCcCCcchhHHHHHHHHHHh
Confidence 99999963 222222 223334433 346777878889999999999999999999986
|
|
| >PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.1e-17 Score=172.52 Aligned_cols=246 Identities=21% Similarity=0.302 Sum_probs=167.5
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
...|+.+|+++||+++|+++++|+ .+++++..+. ...+..+.+++..+
T Consensus 52 ~~~la~~Aa~~aL~~ag~~~~dId-------~li~~~~~~~-------------------------~~~p~~a~~v~~~l 99 (329)
T PRK07204 52 SSYMGAEAAKKAVEDAKLTLDDID-------CIICASGTIQ-------------------------QAIPCTASLIQEQL 99 (329)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEECCCCC-------------------------CCCccHHHHHHHHh
Confidence 467999999999999999998665 4677654311 11234577899999
Q ss_pred CCCC---ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCC
Q 008146 315 GWMG---PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRD 391 (576)
Q Consensus 315 gl~G---p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~ 391 (576)
|+.+ |++.|+.+|+|++.||..|..+|++|.++.+||+++|.+.... .++....
T Consensus 100 gl~~~~~~~~~v~~~C~~~~~al~~a~~~l~~g~~~~~Lvv~~e~~s~~~-----------------------~~~~~~~ 156 (329)
T PRK07204 100 GLQHSGIPCFDINSTCLSFITALDTISYAIECGRYKRVLIISSEISSVGL-----------------------NWGQNES 156 (329)
T ss_pred CCCCCCceEEEccchhHHHHHHHHHHHHHHHCCCCCEEEEEEeccccCCC-----------------------CcccCcc
Confidence 9974 8999999999999999999999999999999999999732110 1223345
Q ss_pred cceecCceEEEEEcchHHHHhcCCeee-------------EEEEEEEEecCCCCCCCC-------CCChH--------HH
Q 008146 392 GFVMGEGAGVLLLEELEHAKKRGAKIY-------------AEFRGGSFTSDAYHMTEP-------HPDGV--------GV 443 (576)
Q Consensus 392 G~v~gEGAaalvL~~~~~A~~~g~~i~-------------a~I~g~~~~~dg~~~~~~-------~p~~~--------~~ 443 (576)
++++||||+|+||++.+.. ..+. ..+.+.+...+....... ..++. ..
T Consensus 157 ~~lfGDGAaA~ll~~~~~~----~~il~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (329)
T PRK07204 157 CILFGDGAAAVVITKGDHS----SRILASHMETYSSGAHLSEIRGGGTMIHPREYSEERKEDFLFDMNGRAIFKLSSKYL 232 (329)
T ss_pred eEEEecccEEEEEEEcCCC----CcEEEEEEEEecCCCCceEEecCCcCCCCcccccccccCceEEECCHHHHHHHHHHH
Confidence 7899999999999975421 1222 122222211111100000 01111 24
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCCCcccccccccccccccchhHHHHHHHHHHHHcC
Q 008146 444 ILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTG 523 (576)
Q Consensus 444 ~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g 523 (576)
.++++++|+++|++++|||++..|..+... .+++.+.++-..+ .+......+||+.+|+=.+.|.. .++++
T Consensus 233 ~~~i~~~L~~~gl~~~did~~~~H~~~~~~-----~~~i~~~l~l~~e-~~~~~~~~~Gn~~sas~~~~L~~---~~~~g 303 (329)
T PRK07204 233 MKFIDKLLMDAGYTLADIDLIVPHQASGPA-----MRLIRKKLGVDEE-RFVTIFEDHGNMIAASIPVALFE---AIKQK 303 (329)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEeCCCCHHH-----HHHHHHHcCCCHH-HhhhhHhhhCcHHHHHHHHHHHH---HHHcC
Confidence 488999999999999999999999988764 3466666664322 23456678899887765544443 23443
Q ss_pred CCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEe
Q 008146 524 WIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573 (576)
Q Consensus 524 ~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~ 573 (576)
.+ .+-+.++..+||.|-+-+.++|+
T Consensus 304 ~~-------------------------~~Gd~vll~~~G~G~s~~~~ll~ 328 (329)
T PRK07204 304 KV-------------------------QRGNKILLLGTSAGLSIGGILLE 328 (329)
T ss_pred CC-------------------------CCCCEEEEEEEchhhhheeeEEe
Confidence 32 02245677899999999988886
|
|
| >PRK07855 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.7e-17 Score=172.72 Aligned_cols=241 Identities=18% Similarity=0.156 Sum_probs=161.1
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
..|+.+++++||+|||+++++|| ++++++.. . . ....++..+|
T Consensus 25 ~~L~~eA~~~Al~DAgl~~~dID-------~~~~~~~~-~---------------------------~--~~~~l~~~lG 67 (386)
T PRK07855 25 LRLACEAVLAALDDAGLAPSDVD-------GLVTFTMD-T---------------------------N--PEIAVARALG 67 (386)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEecCc-c---------------------------c--cHHHHHHHCC
Confidence 46899999999999999998776 56653210 0 0 0134778899
Q ss_pred CCC--ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEecc--cccc------------------------------chh
Q 008146 316 WMG--PNYSISTACATSNFCILNAANHIIRGEANVMLCGGS--DAAV------------------------------IPI 361 (576)
Q Consensus 316 l~G--p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGv--d~~~------------------------------~p~ 361 (576)
+.+ |...|.++|+|+..+|..|+++|++|.||+|||.|+ +... .|.
T Consensus 68 l~~~~~~~~v~~gg~sg~~~~~~A~~~I~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 147 (386)
T PRK07855 68 IGELKFFSRIHYGGGAACATVQQAAMAVATGVADVVVCYRAFNERSGMRFGQGQTGLAENPTSTGVDYGWSYPHGLLTPA 147 (386)
T ss_pred CCCCcceeeecCCcHHHHHHHHHHHHHHHCCCCCEEEEEeecccccccccccccccccccccccccchhhhhhcCCCChH
Confidence 976 445789999999999999999999999999999987 2210 000
Q ss_pred hhHHHHHhhhhhccC------------------CCCCCCC--CCCccC--------------CCcceecCceEEEEEcch
Q 008146 362 GLGGFVACRALSQRN------------------NDPTKAS--RPWDIN--------------RDGFVMGEGAGVLLLEEL 407 (576)
Q Consensus 362 ~~~~~~~~~~ls~~~------------------~~p~~~~--rpfd~~--------------~~G~v~gEGAaalvL~~~ 407 (576)
.+.++...+.+...+ .+|.... +|++.+ -|...++|||+++||.++
T Consensus 148 ~~~al~a~~ym~~~G~t~e~lA~vavk~~~~A~~NP~A~~~~~~~t~e~vl~s~~Ia~Pl~~~d~~~~sDGAaAvvl~se 227 (386)
T PRK07855 148 AWVAMLARRYMHEYGATSEDFGRVAVADRKHAATNPKAWFYGRPITLEDHQNSRWIAEPLRLLDCCQESDGAVALVVTSA 227 (386)
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhcChHhhhcCCCCCHHHHhcCCcccCCchhhhcCCcCCceEEEEEecH
Confidence 011111111111111 1233221 233211 355567999999999999
Q ss_pred HHHHhcCCeeeEEEEEEEEecCCCCCC-----CCCC-ChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHH
Q 008146 408 EHAKKRGAKIYAEFRGGSFTSDAYHMT-----EPHP-DGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQA 481 (576)
Q Consensus 408 ~~A~~~g~~i~a~I~g~~~~~dg~~~~-----~~~p-~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~A 481 (576)
+.|++.++++ .+|+|++..++..... ..+. .......+++++|+++|++++|||++|+|++.|. .|+..
T Consensus 228 e~A~~l~~~p-v~I~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~aa~~a~~~AGi~~~DiDv~El~D~Ft~----~~l~~ 302 (386)
T PRK07855 228 ERARDLKQRP-AVIKAAAQGSGADQYMMTSYYRDDITGLPEMGLVARQLWAQSGLGPADIDTAILYDHFTP----FVLMQ 302 (386)
T ss_pred HHHhhCCCCC-EEEEEEEEecCCccccccccccccccccchHHHHHHHHHHHcCCCHHHCcEEEeccCCcH----HHHHH
Confidence 9998877665 5899998866433111 0111 1234457999999999999999999999999996 44444
Q ss_pred HHHH-----------HcC-----CCCccc---ccccccccccccchhHHHHHHHHHHHHc
Q 008146 482 LIHC-----------FGQ-----NRGLRV---NSTKSMIGHLLGAAGAVEAIAVVQAIRT 522 (576)
Q Consensus 482 l~~~-----------f~~-----~~~~~v---~s~K~~iGH~~gAsG~~~li~~~l~L~~ 522 (576)
++.. +.. ...+|| +..++ .||+. |+.+++++++||+.
T Consensus 303 ~E~lG~~~~Ge~~~~v~~G~~~~~G~lPvN~sGGll~-~gh~~---G~~~i~E~~~QLrG 358 (386)
T PRK07855 303 LEELGFCGRGEAKDFIADGALELGGRLPINTHGGQLG-EAYIH---GMNGIAEAVRQLRG 358 (386)
T ss_pred HHHcCCCCCCcHHHHHHCCCcccCCcccccCCCcccc-cCchh---hHHHHHHHHHHHhC
Confidence 4322 111 124677 44444 38876 99999999999997
|
|
| >PRK08257 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.2e-16 Score=174.45 Aligned_cols=250 Identities=18% Similarity=0.206 Sum_probs=169.3
Q ss_pred HHHHHHHHHHHHHhCCCC--hhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHH
Q 008146 236 MLYLLTAGKKALADGGIT--EDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 313 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~--~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~ 313 (576)
..|+.+++++||+|||++ +++|| +++++..... . .+.....++..
T Consensus 28 ~~L~~eA~~~Al~DAGl~~~~~dID-------~v~v~~~~~~-------------------------~-~~~~~~~la~~ 74 (498)
T PRK08257 28 VDLMAAAARAAAADAGADAVLEAID-------SVAVVNQLSW-------------------------R-YRDPPGLLAER 74 (498)
T ss_pred HHHHHHHHHHHHHhcCCCcCHHHCC-------EEEEeccccc-------------------------c-ccCHHHHHHHH
Confidence 568999999999999999 87666 6777653210 0 11224678889
Q ss_pred hCCCC-ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchh-------------------------------
Q 008146 314 LGWMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI------------------------------- 361 (576)
Q Consensus 314 lgl~G-p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~------------------------------- 361 (576)
+|+.. +.....+++.|+..+|+.|+++|++|++|+|||+|+|.+.+..
T Consensus 75 lGl~p~~~~~~~~GG~s~~~~v~~Aa~~IasG~advVLv~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (498)
T PRK08257 75 LGADPARTVYSPVGGNSPQRLVNEAALRIAAGEADVALVAGAEAQSTATKLRKAGEKLDWTPQDEGPLADRGGDPRPMAS 154 (498)
T ss_pred cCCCCcceeEecCCCHHHHHHHHHHHHHHHCCCCCEEEEeeeeeccccchhccccccccccccccccccccccccccccc
Confidence 99964 4445667888999999999999999999999999999743210
Q ss_pred ------------hhHHHHHhhhhhccC----------------------CCCCC--------------------CCCCCc
Q 008146 362 ------------GLGGFVACRALSQRN----------------------NDPTK--------------------ASRPWD 387 (576)
Q Consensus 362 ------------~~~~~~~~~~ls~~~----------------------~~p~~--------------------~~rpfd 387 (576)
.+..+.....+...+ .+|.. .+-||.
T Consensus 155 ~~e~~~G~~~p~~~yal~a~ay~~~~G~t~e~~~a~~a~l~~~~~~~Aa~NP~A~~r~~~t~eevl~~~~~~rmIa~Pl~ 234 (498)
T PRK08257 155 PAELRHGLDRPVYVYPLFENALRAALGRSPEEHRAEMGELWAPFSAVAAKNPHAWIPRERSAEEIVTPTPDNRMIAWPYT 234 (498)
T ss_pred hhhhhcCCCCcchHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhhCHHHhhCCCCCHHHHhcccCCCCeeeCCcc
Confidence 000000000000000 01110 112332
Q ss_pred cCCCcceecCceEEEEEcchHHHHhcCC--eeeEEEEEEEEecCCCCCCC-CCC-ChHHHHHHHHHHHHHcCCCCCCccE
Q 008146 388 INRDGFVMGEGAGVLLLEELEHAKKRGA--KIYAEFRGGSFTSDAYHMTE-PHP-DGVGVILCIEKALAHSGVSREDVNY 463 (576)
Q Consensus 388 ~~~~G~v~gEGAaalvL~~~~~A~~~g~--~i~a~I~g~~~~~dg~~~~~-~~p-~~~~~~~ai~~AL~~Agl~~~dId~ 463 (576)
.--+.....||++++||.+++.|++.+. .....|.|++..++...... ++. .......+.+++|+++|++++|||+
T Consensus 235 ~ldca~~~~DGaaAvil~S~e~A~~l~~~~~~~V~i~g~a~~~~~~~~~~r~~~~~~~~~~~aa~~a~~~AGi~~~Did~ 314 (498)
T PRK08257 235 KLMNANDMVDQGAAVLLTSVAKARRLGVPEDRWVYLHGGADAHDPYDILERPDLHRSPAIRAAGRRALALAGLGIDDIDA 314 (498)
T ss_pred HhhcCCCCcccceEEEEeeHHHHHhcCCCCCceEEEEEEEEeeCccccccccccccChHHHHHHHHHHHHhCCCHHHCCE
Confidence 2222223689999999999999998773 22467999998877644322 111 2334567999999999999999999
Q ss_pred EEecCCCCccCcHHHHHHHHHH-HcCC--CCcccccccccccccccchhHHHHHHHHHHHHc
Q 008146 464 INAHATSTPAGDIKEYQALIHC-FGQN--RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRT 522 (576)
Q Consensus 464 ve~Hgtgt~~gD~~E~~Al~~~-f~~~--~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~ 522 (576)
+|+|.+++. .|...+... |... .++.+...-...||+.+++|+.++++++.||+.
T Consensus 315 ~elydcF~~----~~~~~~E~LGl~~~g~~pvN~sGGl~s~G~P~~a~g~~~i~E~v~QLRg 372 (498)
T PRK08257 315 FDLYSCFPS----AVQVAARELGLDLDDPRPLTVTGGLPFFGGPGNNYVTHAIAEMVERLRA 372 (498)
T ss_pred EEeccCCHH----HHHHHHHHcCcCCCCCCCcCCCcChhhcCCchhhHHHHHHHHHHHHHhh
Confidence 999999986 555555544 3333 244555555556999999999999999999996
|
|
| >PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.4e-17 Score=168.03 Aligned_cols=291 Identities=19% Similarity=0.218 Sum_probs=186.7
Q ss_pred CCcEEEEecceecCCC-CCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHH
Q 008146 164 QKRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTA 242 (576)
Q Consensus 164 ~~~IaItGmg~~~P~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~a 242 (576)
|..|.|+++|...|.- ...+++++.+......|. .++ . +....+..+ -.....|+.++
T Consensus 1 ~~~v~I~ai~~~lP~~~~~~~~~~~~~~~~~~~i~--~~~---g-----------i~~r~~~~~-----~~~~~~la~~A 59 (319)
T PRK09352 1 MMYAKILGTGSYLPERVVTNDDLEKMVDTSDEWIV--TRT---G-----------IKERRIAAP-----DETTSDLATEA 59 (319)
T ss_pred CCceEEEEEEEECCCeEEcHHHHHHHcCCCHHHhh--hhc---C-----------eEEEEeCCC-----CCCHHHHHHHH
Confidence 3468899999999998 677777775421110110 000 0 000000001 12357899999
Q ss_pred HHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCCCC-ccc
Q 008146 243 GKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG-PNY 321 (576)
Q Consensus 243 a~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~ 321 (576)
+.+||+++|+++++++ .|++|++... ......+.+++..+|+.+ |.+
T Consensus 60 ~~~al~~agl~~~~id-------~vi~~~~~~~-------------------------~~~~~~~~~i~~~lG~~~~~~~ 107 (319)
T PRK09352 60 AKKALEAAGIDPEDID-------LIIVATTTPD-------------------------YAFPSTACLVQARLGAKNAAAF 107 (319)
T ss_pred HHHHHHHcCCCHHHCC-------EEEEEcCCCC-------------------------CCCchHHHHHHHHhCCCCCcEe
Confidence 9999999999988665 5778765311 111234678999999987 899
Q ss_pred cccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceEE
Q 008146 322 SISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGV 401 (576)
Q Consensus 322 tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAaa 401 (576)
+|+++|+|++.||..|+++|++|++|.+||+|+|.+.... . ++....++++||||++
T Consensus 108 ~v~~~Casg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~----------------------~-~~~~~~~~~~gDGaaA 164 (319)
T PRK09352 108 DLSAACSGFVYALSTADQFIRSGAYKNVLVIGAEKLSRIV----------------------D-WTDRSTCVLFGDGAGA 164 (319)
T ss_pred eccccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhcccc----------------------C-cccCCceEEEeccceE
Confidence 9999999999999999999999999999999999843110 0 1122346799999999
Q ss_pred EEEcchHHHHhcCCeeeEEEEEEEEecCCCCC---CCC-----CC--------C--------hHHHHHHHHHHHHHcCCC
Q 008146 402 LLLEELEHAKKRGAKIYAEFRGGSFTSDAYHM---TEP-----HP--------D--------GVGVILCIEKALAHSGVS 457 (576)
Q Consensus 402 lvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~---~~~-----~p--------~--------~~~~~~ai~~AL~~Agl~ 457 (576)
+||++.+.. . +.++...+++.+. ..+ .| . .....++++++|+++|++
T Consensus 165 ~ll~~~~~~-----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~ 235 (319)
T PRK09352 165 VVLGASEEP-----G----ILSTHLGSDGSYGDLLYLPGGGSRGPASPGYLRMEGREVFKFAVRELAKVAREALEAAGLT 235 (319)
T ss_pred EEEEEcCCC-----C----eEEEEEEEcCCCCCeEEeCCCCCCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999985431 1 2222222222210 000 00 1 122456899999999999
Q ss_pred CCCccEEEecCCCCccCcHHHHHHHHHHHcCCCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCC
Q 008146 458 REDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAV 537 (576)
Q Consensus 458 ~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~ 537 (576)
++||+|+..|..+... ...+.+.++-..+ .+......+||+.+|+-.+.|..+ ++.|.+
T Consensus 236 ~~di~~~~~h~~~~~~-----~~~~~~~lg~~~~-~~~~~~~~~Gn~~~a~~~~~L~~~---~~~g~~------------ 294 (319)
T PRK09352 236 PEDIDWLVPHQANLRI-----IDATAKKLGLPME-KVVVTVDKYGNTSAASIPLALDEA---VRDGRI------------ 294 (319)
T ss_pred HHHCCEEEECCCCHHH-----HHHHHHHhCCCHH-HhhhhHHhhCCHHHHHHHHHHHHH---HHcCCC------------
Confidence 9999999999665542 2334444443211 122334578999888877666543 333322
Q ss_pred CCcccccCCcccccCccEEEEeccCCCcceeEEEEe
Q 008146 538 VDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573 (576)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~ 573 (576)
.+-+..+.-+||.|-+-..++|+
T Consensus 295 -------------~~Gd~vll~s~G~G~~~~~~ll~ 317 (319)
T PRK09352 295 -------------KRGDLVLLEGFGGGLTWGAALVR 317 (319)
T ss_pred -------------CCCCEEEEEEEchhheeEEEEEE
Confidence 02245667799998888888875
|
|
| >COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.2e-16 Score=163.11 Aligned_cols=289 Identities=20% Similarity=0.270 Sum_probs=185.2
Q ss_pred cEEEEecceecCCC-CCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhh-hcCCHHHHHHHHHH
Q 008146 166 RVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLS-KRMDKFMLYLLTAG 243 (576)
Q Consensus 166 ~IaItGmg~~~P~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a-~~mdp~~rl~l~aa 243 (576)
.+.|+|+|...|.- .+.+++-+.+.--..+|..... |-+|.. ..-.....|+.+|+
T Consensus 3 ~a~i~g~G~~lP~~~vtn~d~e~~~~tsdewI~~rtG----------------------ir~R~~a~~~e~~s~la~~Aa 60 (323)
T COG0332 3 NAKILGIGSYLPERVVTNADLEKRVDTSDEWIETRTG----------------------IRERRIAADDETTSDLAVEAA 60 (323)
T ss_pred cceEEEEEeecCCcccChHHHHhccCCCcceeeeecC----------------------CceeeecCCCccHHHHHHHHH
Confidence 47899999999998 4555554222222112211100 111111 11234578999999
Q ss_pred HHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCCCC-cccc
Q 008146 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG-PNYS 322 (576)
Q Consensus 244 ~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~t 322 (576)
++||++||+++++|| -+++.++. |....+..+..++..||+++ +.+.
T Consensus 61 ~~AL~~Agi~~~dID-------lII~aT~t-------------------------pd~~~Ps~A~~vq~~LG~~~~~afD 108 (323)
T COG0332 61 RKALEDAGISPDDID-------LIIVATST-------------------------PDHLFPSTACLVQARLGLGGAPAFD 108 (323)
T ss_pred HHHHHHcCCCHHHCC-------EEEEEcCC-------------------------cccCCChHHHHHHHHhCCCCcceee
Confidence 999999999999777 56666654 22234567899999999988 9999
Q ss_pred ccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceEEE
Q 008146 323 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 402 (576)
Q Consensus 323 v~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAaal 402 (576)
+..+|++.+.||..|.++|++|.++.+||+|.|.+.. .+. |+++...+++||||||+
T Consensus 109 l~aaCsgf~yaL~~A~~~i~sG~~k~vLVVg~e~~S~-----------~ld------------~~dR~t~vlFgDGAgAv 165 (323)
T COG0332 109 LQAACSGFLYALSVADGLIRSGGYKNVLVVGAETLSR-----------ILD------------WTDRDTCVLFGDGAGAV 165 (323)
T ss_pred chhhhHHHHHHHHHHHHHHHcCCCCEEEEEehhHhhc-----------cCC------------HhhccceEEEcCCceEE
Confidence 9999999999999999999999999999999998421 111 44556789999999999
Q ss_pred EEcchHHHHhcCCeeeEEEEEEEEecCCCCC---CC----------------CCCC--------hHHHHHHHHHHHHHcC
Q 008146 403 LLEELEHAKKRGAKIYAEFRGGSFTSDAYHM---TE----------------PHPD--------GVGVILCIEKALAHSG 455 (576)
Q Consensus 403 vL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~---~~----------------~~p~--------~~~~~~ai~~AL~~Ag 455 (576)
||++.+ .+.| |.......|+... .. ..-+ ...+..+++++|++++
T Consensus 166 vl~~~~--~~~~------i~~~~l~sdg~~~~~l~~~~~~~~~~~~~~~~~~~~m~Gr~vfk~av~~~~~~~~~~L~~~~ 237 (323)
T COG0332 166 VLEATE--DDNG------ILDTDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDGREVFKFAVRAMPKAIEEVLEKAG 237 (323)
T ss_pred EEecCC--CCcC------eeeeeeeccccCCCeeeccCCCCccccccccccceeeccHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999875 1111 2222222222210 00 0001 1234589999999999
Q ss_pred CCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCC
Q 008146 456 VSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPD 535 (576)
Q Consensus 456 l~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~ 535 (576)
++++||||+..|-.... -.+++.+.++-.. -.+...-..+|++.+||=-+.|.+ .++.|.+.|
T Consensus 238 l~~~dId~~vpHQan~r-----i~~~i~~~l~~~~-~k~~~~~~~yGNtsaAsiplaL~~---~~~~g~ik~-------- 300 (323)
T COG0332 238 LTPEDIDWFVPHQANLR-----IIEAIAKKLGIPE-EKVVVTVDKYGNTSAASIPLALDE---ALREGRIKP-------- 300 (323)
T ss_pred CCHHHCCEEccccccHH-----HHHHHHHHcCCCH-HHHhhHHHHhcccccchHHHHHHH---HhhhCCCCC--------
Confidence 99999999999955443 2344445554321 112223334688887764444433 345544411
Q ss_pred CCCCcccccCCcccccCccEEEEeccCCCcceeEEEEe
Q 008146 536 AVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573 (576)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~ 573 (576)
-...+...||-|=+-..++++
T Consensus 301 -----------------Gd~ill~~fG~Gltwg~~~~r 321 (323)
T COG0332 301 -----------------GDLVLLEAFGGGLTWGAALVR 321 (323)
T ss_pred -----------------CCEEEEEeecCcceeeeEEEE
Confidence 134556677777666666664
|
|
| >KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.7e-18 Score=163.11 Aligned_cols=277 Identities=24% Similarity=0.363 Sum_probs=182.8
Q ss_pred HHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCCC
Q 008146 238 YLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM 317 (576)
Q Consensus 238 l~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~ 317 (576)
++.++...||+|+++.-+ +++..-+|-++|-+..+. |.-|.+|++
T Consensus 32 ~a~ea~tkal~da~ikys---~vqqa~vgyvfgdstcgq--------------------------------raiyevgmt 76 (408)
T KOG1406|consen 32 FAKEAITKALQDAGIKYS---EVQQAVVGYVFGDSTCGQ--------------------------------RAIYEVGMT 76 (408)
T ss_pred HHHHHHHHHHHhcCCCHH---HHHhhhheeeecCCccch--------------------------------HHHHhcccc
Confidence 567889999999999876 444566777777543222 233458999
Q ss_pred C-ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccc------------------------------hhhh--H
Q 008146 318 G-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI------------------------------PIGL--G 364 (576)
Q Consensus 318 G-p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~------------------------------p~~~--~ 364 (576)
| |.+.|++.|++|..||.+|.+.|++|..|++|+.|.|.|.. |... .
T Consensus 77 gipi~nvnnncatgssalflakqiiesgn~dcvlalgfekm~~gsl~~k~~dra~p~dkhi~~m~e~ygl~a~pmaaqmf 156 (408)
T KOG1406|consen 77 GIPIYNVNNNCATGSSALFLAKQIIESGNSDCVLALGFEKMERGSLSNKAADRALPVDKHISVMSETYGLEAAPMAAQMF 156 (408)
T ss_pred CcceeeccCccccCchHHHHHHHHHhcCCcceEEeechhhhCCcccchhhhhccCcchhhHHHHHhhccCCCCcchHHHh
Confidence 9 99999999999999999999999999999999999998631 1000 0
Q ss_pred HHHHhhhhhccCC------------CCCCCCCCCccCCCcc---------------------eecCceEEEEEcchHHHH
Q 008146 365 GFVACRALSQRNN------------DPTKASRPWDINRDGF---------------------VMGEGAGVLLLEELEHAK 411 (576)
Q Consensus 365 ~~~~~~~ls~~~~------------~p~~~~rpfd~~~~G~---------------------v~gEGAaalvL~~~~~A~ 411 (576)
+...-..+...+. .......||..-+|-| ..+||+++.+|.++...+
T Consensus 157 gnagkehmekygtk~ehfakiawknhkhsvnnpysqf~deysldqvm~s~~v~dflt~lqccptsdgaaaailaseafv~ 236 (408)
T KOG1406|consen 157 GNAGKEHMEKYGTKPEHFAKIAWKNHKHSVNNPYSQFRDEYSLDQVMKSPQVVDFLTKLQCCPTSDGAAAAILASEAFVR 236 (408)
T ss_pred hhhHHHHHHHhCCCHHHHhHhhhhccccccCChhHhhhhhccHHHHhcchHHHHHHHHhhcCCCCCchHHHHHhHHHHHH
Confidence 1000011111111 1112223544443333 358999999999988888
Q ss_pred hcCCeeeE-EEEEEEEecCCCCCCCCC-----CChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHH
Q 008146 412 KRGAKIYA-EFRGGSFTSDAYHMTEPH-----PDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHC 485 (576)
Q Consensus 412 ~~g~~i~a-~I~g~~~~~dg~~~~~~~-----p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~ 485 (576)
+.|..-.+ +|.|.-+.+|..+..... ........+.++.+++.|++|.||++||+|++..+ ++.+-++||.-+
T Consensus 237 k~gl~~qaveivg~em~td~ps~faeks~ikm~gfdm~~~aa~~l~aksgltpndvqvielhdcfs~-nelityealglc 315 (408)
T KOG1406|consen 237 KHGLEKQAVEIVGMEMATDPPSTFAEKSLIKMAGFDMTRLAAKRLFAKSGLTPNDVQVIELHDCFSA-NELITYEALGLC 315 (408)
T ss_pred hcccHHHHHHHHHHHhccCCchhhhhhhhhhhhcchHHHHHHHHHHHHcCCCcccceEEEeecccch-hhhhhHHHhcCC
Confidence 77765443 477776666654321111 11234568889999999999999999999999885 666767776432
Q ss_pred H-cC---------C---CCccccccccc--ccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccc
Q 008146 486 F-GQ---------N---RGLRVNSTKSM--IGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKER 550 (576)
Q Consensus 486 f-~~---------~---~~~~v~s~K~~--iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~ 550 (576)
- |+ + .+..|+...+. -||++||+|+++.++...+|+.-. .+.+-
T Consensus 316 pegqg~~~vdrgdntyggkwvinpsggliskghplgatglaqcaelcwqlrg~a---------------------gkrqv 374 (408)
T KOG1406|consen 316 PEGQGGEFVDRGDNTYGGKWVINPSGGLISKGHPLGATGLAQCAELCWQLRGLA---------------------GKRQV 374 (408)
T ss_pred CCCCCceeeecCCCccCceEEECCCCccccCCCcCccchHHHHHHHHHHHhhhh---------------------ccccC
Confidence 1 11 0 11223333333 399999999999999999998511 11122
Q ss_pred cCccEEEEeccCCCcceeEEE
Q 008146 551 LEVKAALSNSFGFGGHNSSII 571 (576)
Q Consensus 551 ~~~~~alv~sfG~gG~na~vi 571 (576)
...+.++.++.|.||.....+
T Consensus 375 pnakvalqhnlgiggavvv~l 395 (408)
T KOG1406|consen 375 PNAKVALQHNLGIGGAVVVAL 395 (408)
T ss_pred CCchhhhhhccCcCceeEEEE
Confidence 235667777888887654443
|
|
| >PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.1e-16 Score=164.29 Aligned_cols=245 Identities=15% Similarity=0.097 Sum_probs=158.2
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
...|+.+|+++||+++|+++++|+ .+++++..+++ ..+..+..+...+
T Consensus 63 ~~~La~~A~~~aL~~agi~~~dId-------~li~~s~~~~~-------------------------~~p~~a~~v~~~L 110 (378)
T PRK06816 63 NAQMAAEAIRDLLDDAGFSLGDIE-------LLACGTSQPDQ-------------------------LMPGHASMVHGEL 110 (378)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEECCCCc-------------------------CChHHHHHHHhhC
Confidence 578999999999999999998666 57777653211 1122346788889
Q ss_pred CCCC-ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHH-hhhhhccCCCCCCCCCCCccCCCc
Q 008146 315 GWMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVA-CRALSQRNNDPTKASRPWDINRDG 392 (576)
Q Consensus 315 gl~G-p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~-~~~ls~~~~~p~~~~rpfd~~~~G 392 (576)
|+.. |.+.|+.+|+|++.||+.|.++|++|..+.+||+|+|.+........|.. .+.+.. .++..+++|+.+..|
T Consensus 111 gl~~~~~~~v~~~Cas~~~al~~A~~~i~sg~~~~vLvv~~E~~s~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 187 (378)
T PRK06816 111 GAPPIEVVSSAGVCAAGMMALKYAYLSVKAGESRNAVATASELASRWFRASRFEAEEEKLAE---LEENPEIAFEKDFLR 187 (378)
T ss_pred CCCCCceeeecCcCHHHHHHHHHHHHHHHCCCCCEEEEEeEccchhhhhhhhhhhHHHHhhc---CcccCCCCCCCCCCC
Confidence 9865 88999999999999999999999999999999999998654443322321 333332 134467899999999
Q ss_pred ceecCceEEEEEcchHHHHhcCCe--eeEEEEEEE-Eec------------CCCCCCCC--C-------------CChHH
Q 008146 393 FVMGEGAGVLLLEELEHAKKRGAK--IYAEFRGGS-FTS------------DAYHMTEP--H-------------PDGVG 442 (576)
Q Consensus 393 ~v~gEGAaalvL~~~~~A~~~g~~--i~a~I~g~~-~~~------------dg~~~~~~--~-------------p~~~~ 442 (576)
+++||||+|+||++.+.. .|.. +.....+.. ... ++...... . .++..
T Consensus 188 ~~fGDGA~A~vl~~~~~~--~g~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (378)
T PRK06816 188 WMLSDGAGAVLLENKPRP--DGLSLRIDWIDLRSYAGELPVCMYAGAEKNEDGSLKGWSDYPPEEAEAASALSLKQDVRL 265 (378)
T ss_pred EeeecccEEEEEEecCCC--CCceEEEEEEeeecccccCccceecCCccCCCCCccCcccCCHHHHHhccCchHHhHHHH
Confidence 999999999999865431 1221 111000000 000 00000000 0 01111
Q ss_pred --------HHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHH-----cCCCCcccccccccccccccchh
Q 008146 443 --------VILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCF-----GQNRGLRVNSTKSMIGHLLGAAG 509 (576)
Q Consensus 443 --------~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f-----~~~~~~~v~s~K~~iGH~~gAsG 509 (576)
....++++|+++|++++|||++..|-......+ .+.+.+ +-..+- +...-..+||+.+|+-
T Consensus 266 ~~~~~~~~~~~~i~~~L~~~gl~~~DId~~v~Hq~n~~~~~-----~v~~~l~~~~~gl~~~k-~~~~~~~~GNt~sAsi 339 (378)
T PRK06816 266 LNENIVVYTIKPLLELVDKRNLDPDDIDYFLPHYSSEYFRE-----KIVELLAKAGFMIPEEK-WFTNLATVGNTGSASI 339 (378)
T ss_pred HHHHhHHHHHHHHHHHHHHcCCChhhCCEEeeCcccHHHHH-----HHHHHHHhccCCCChhh-eEEeccccccccchHH
Confidence 157788899999999999999999977665433 233332 211111 1223347899999887
Q ss_pred HHHHHHHHHHHHcCCC
Q 008146 510 AVEAIAVVQAIRTGWI 525 (576)
Q Consensus 510 ~~~li~~~l~L~~g~i 525 (576)
.+.|..+ +++|.+
T Consensus 340 pi~L~~a---~~~g~~ 352 (378)
T PRK06816 340 YIMLDEL---LNSGRL 352 (378)
T ss_pred HHHHHHH---HHcCCC
Confidence 6666443 455443
|
|
| >TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.7e-16 Score=160.86 Aligned_cols=288 Identities=19% Similarity=0.224 Sum_probs=183.9
Q ss_pred EEEEecceecCCC-CCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHHH
Q 008146 167 VVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKK 245 (576)
Q Consensus 167 IaItGmg~~~P~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa~e 245 (576)
+.|.++|..+|.- .+.+++.+.+......+.+ + ..+ ....+..+ -.....|+.+++++
T Consensus 3 ~~I~~i~~~~P~~~~~~~~~~~~~~~~~~~i~~--~---~gi-----------~~r~~~~~-----~~~~~~la~~A~~~ 61 (318)
T TIGR00747 3 AGILGTGSYLPEKVLTNADLEKMVDTSDEWIVT--R---TGI-----------KERRIAAD-----DETSSTMGFEAAKR 61 (318)
T ss_pred CEEEEEEEECCCceecHHHHHHhcCCchHHeec--c---cCc-----------eEEEECCC-----CCCHHHHHHHHHHH
Confidence 6799999999998 6778877654321111100 0 000 00000001 11347789999999
Q ss_pred HHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCCCC-cccccc
Q 008146 246 ALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG-PNYSIS 324 (576)
Q Consensus 246 AL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv~ 324 (576)
||+++|+++++|+ .+++++...+ ......+.+++..+|+++ |.+.|+
T Consensus 62 al~~agl~~~~Id-------~~i~~~~~~~-------------------------~~~~~~a~~l~~~lGl~~~~~~~v~ 109 (318)
T TIGR00747 62 AIENAGISKDDID-------LIIVATTTPD-------------------------HAFPSAACMVQAYLGIKGIPAFDLS 109 (318)
T ss_pred HHHHcCCCHHHCC-------EEEEECCCCC-------------------------CCCChHHHHHHHHhCCCCCcEeehh
Confidence 9999999998665 6777764311 112234678999999988 899999
Q ss_pred CCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceEEEEE
Q 008146 325 TACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLLL 404 (576)
Q Consensus 325 taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAaalvL 404 (576)
.+|+|++.||..|+++|++|.++.+||+|+|.+.... ++ ......+++||||+|+||
T Consensus 110 ~~C~s~~~al~~A~~~i~~g~~~~~Lvv~~e~~~~~~----------------------~~-~~~~~~~~~GDGAaA~lL 166 (318)
T TIGR00747 110 AACAGFIYALSVAKQYIESGKYKTVLVVGAEKLSSTL----------------------DW-TDRGTCVLFGDGAGAVVL 166 (318)
T ss_pred hhhHHHHHHHHHHHHHHHcCCCCEEEEEEehhhcCcC----------------------Cc-CCCCeEEEEecceeEEEE
Confidence 9999999999999999999999999999999843211 11 112235689999999999
Q ss_pred cchHHHHhcCCeeeEEEEEEEEecCCCC---CCCCC-------C--------------ChHHHHHHHHHHHHHcCCCCCC
Q 008146 405 EELEHAKKRGAKIYAEFRGGSFTSDAYH---MTEPH-------P--------------DGVGVILCIEKALAHSGVSRED 460 (576)
Q Consensus 405 ~~~~~A~~~g~~i~a~I~g~~~~~dg~~---~~~~~-------p--------------~~~~~~~ai~~AL~~Agl~~~d 460 (576)
++.+... . |......+++.. ...+. . ......++++++|+++|++++|
T Consensus 167 ~~~~~~~----~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~d 238 (318)
T TIGR00747 167 GESEDPG----G----IISTHLGADGTQGEALYLPAGGRPTSGPSPFITMEGNEVFKHAVRKMGDVVEETLEANGLDPED 238 (318)
T ss_pred eecCCCC----c----EEEEEEEEcCCCcceEEECCCCcCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 8754321 1 223222222220 00000 0 0122356789999999999999
Q ss_pred ccEEEecCCCCccCcHHHHHHHHHHHcCCC-CcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCC
Q 008146 461 VNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD 539 (576)
Q Consensus 461 Id~ve~Hgtgt~~gD~~E~~Al~~~f~~~~-~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~ 539 (576)
|+|+..|..+.+.- ..+.+.++-.. ++. .. -..+||+.+|+=.+.|..+ ++++.+.
T Consensus 239 i~~~~~h~~~~~~~-----~~~~~~lgi~~~k~~-~~-~~~~Gn~~sas~~~~L~~~---~~~~~~~------------- 295 (318)
T TIGR00747 239 IDWFVPHQANLRII-----EALAKRLELDMSQVV-KT-VHKYGNTSAASIPLALDEL---LRTGRIK------------- 295 (318)
T ss_pred CCEEEECCCCHHHH-----HHHHHHcCCCHHHee-eh-HhhhCCHHHHHHHHHHHHH---HHcCCCC-------------
Confidence 99999998766532 33445555332 122 22 2348999888766666443 3443321
Q ss_pred cccccCCcccccCccEEEEeccCCCcceeEEEEe
Q 008146 540 TNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573 (576)
Q Consensus 540 ~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~ 573 (576)
+.+..+.-+||.|.+..+++|+
T Consensus 296 ------------~Gd~vll~~~G~G~t~~~~~l~ 317 (318)
T TIGR00747 296 ------------PGDLLLLVAFGGGLTWGAALVR 317 (318)
T ss_pred ------------CCCEEEEEEEehhheeeEEEEE
Confidence 1245667789999898888875
|
Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment. |
| >PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.70 E-value=8.3e-16 Score=161.04 Aligned_cols=315 Identities=18% Similarity=0.188 Sum_probs=191.9
Q ss_pred CCCcEEEEecceecCCC-CCHHHHHHHHHcCC--CcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHH
Q 008146 163 KQKRVVVTGMGLVSPLG-HEPDVFYNNLLEGV--SGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYL 239 (576)
Q Consensus 163 ~~~~IaItGmg~~~P~g-~~~~~~w~~L~~G~--~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~ 239 (576)
+...+.|+|+|...|.- .+.+++.+.+.+.. ..+.+ .+ +. +..| +. ...+..+ -.....|+
T Consensus 2 ~~~~v~I~~~g~~lP~~~v~~~~~~~~~~~~~~~~~~~~--~~----i~-~~~G-i~---~R~~~~~-----~~~~~~la 65 (338)
T PRK09258 2 KYSNVAILSLAYELAPVVVTSSEIEERLAPLYERLRLPP--GQ----LE-ALTG-IR---ERRWWPE-----GTQLSDGA 65 (338)
T ss_pred cccceEEEEEEecCCCccCcHHHHHHHhhhcccccCCCh--hH----hh-hhcC-ce---eEecCCC-----CCCHHHHH
Confidence 34568999999999998 56677666543211 11100 00 00 0000 00 0000111 11246799
Q ss_pred HHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCCC--
Q 008146 240 LTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM-- 317 (576)
Q Consensus 240 l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-- 317 (576)
.+|+++||+++|+++++|+ .|++++... ....+..+..++..+|+.
T Consensus 66 ~~Aa~~aL~~ag~~~~~Id-------~li~~s~~~-------------------------~~~~p~~a~~v~~~lgl~~~ 113 (338)
T PRK09258 66 IAAGRKALAEAGIDPSDIG-------LLINTSVCR-------------------------DYLEPATACRVHHNLGLPKS 113 (338)
T ss_pred HHHHHHHHHHcCCCHHHCC-------EEEEEcCCC-------------------------CCCCChHHHHHHHHcCCCCC
Confidence 9999999999999998666 577776431 112234578899999996
Q ss_pred CccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecC
Q 008146 318 GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGE 397 (576)
Q Consensus 318 Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gE 397 (576)
-+.+.|..+|+|++.||+.|.++|++|.++.+||+++|...... -..+. .... +.....+|+....++.+||
T Consensus 114 ~~~~~v~~~C~~~~~al~~A~~~i~~g~~~~~Lvv~~e~~s~~~-~~~~~--~~~~-----~~~~~~~~~~~~~~~~~GD 185 (338)
T PRK09258 114 CANFDVSNACLGFLNGMLDAANMIELGQIDYALVVSGESAREIV-EATID--RLLA-----PETTREDFAQSFATLTLGS 185 (338)
T ss_pred CceeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEecccchhc-cchhh--hhcc-----CccchhhhhhccceEEecc
Confidence 37899999999999999999999999999999999999743221 11111 1111 1122246777677889999
Q ss_pred ceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCC--CC-----CCCh--------HHHHHHHHHHHHHcCCCCCCcc
Q 008146 398 GAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMT--EP-----HPDG--------VGVILCIEKALAHSGVSREDVN 462 (576)
Q Consensus 398 GAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~--~~-----~p~~--------~~~~~ai~~AL~~Agl~~~dId 462 (576)
||+|+||++.+.. ..+. .+.+.....++.+.. .. ..++ .....+++++|+++|++++|||
T Consensus 186 GA~A~ll~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~did 260 (338)
T PRK09258 186 GAAAAVLTRGSLH-PRGH----RLLGGVTRAATEHHELCQGGRDGMRTDAVGLLKEGVELAVDTWEAFLAQLGWAVEQVD 260 (338)
T ss_pred cceEEEEecCCCC-CCcc----eeeeeeeecCCCcccccccCccceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC
Confidence 9999999975421 1122 244433333332211 00 0111 2234588899999999999999
Q ss_pred EEEecCCCCccCcHHHHHHHHHHHcCCC-CcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcc
Q 008146 463 YINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTN 541 (576)
Q Consensus 463 ~ve~Hgtgt~~gD~~E~~Al~~~f~~~~-~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~ 541 (576)
|+..|..+.+..+ .+.+.++-.. ++. ... ..+||+.+|+=.+.|..+ ++.|.+
T Consensus 261 ~~i~H~~~~~~~~-----~~~~~lgl~~~k~~-~~~-~~~GN~~sas~~~~L~~~---~~~g~~---------------- 314 (338)
T PRK09258 261 RVICHQVGAAHTR-----AILKALGIDPEKVF-TTF-PTLGNMGPASLPITLAMA---AEEGFL---------------- 314 (338)
T ss_pred EEecCCCCHHHHH-----HHHHHhCCCHHHce-ehH-hhhCCcHHhHHHHHHHHH---HHhCCC----------------
Confidence 9999987776433 4444554331 222 222 368999888765555443 333322
Q ss_pred cccCCcccccCccEEEEeccCCCcceeEEEEe
Q 008146 542 VLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573 (576)
Q Consensus 542 ~~~~~~~~~~~~~~alv~sfG~gG~na~vil~ 573 (576)
.+-+.++..+||.|-+...++++
T Consensus 315 ---------~~Gd~vll~~~G~G~s~~~~~~~ 337 (338)
T PRK09258 315 ---------KPGDRVALLGIGSGLNCSMLEVK 337 (338)
T ss_pred ---------CCCCEEEEEEechhHhhHhHeee
Confidence 02245667788888666655553
|
|
| >PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.7e-15 Score=156.29 Aligned_cols=289 Identities=17% Similarity=0.202 Sum_probs=182.8
Q ss_pred cEEEEecceecCCC-CCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 008146 166 RVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 244 (576)
Q Consensus 166 ~IaItGmg~~~P~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa~ 244 (576)
.+.|.|+|...|.- .+.+++.+........+. +..+...+ .+..+ -.....|+.++++
T Consensus 4 ~~~I~~ig~~~P~~~v~~~e~~~~~~~~~~~i~-----~~~Gi~~r-----------~~~~~-----~~~~~~la~~A~~ 62 (325)
T PRK12879 4 YARITGIGTYVPPRVLTNDDLETFIDTSDEWIV-----QRTGIKER-----------RIAHV-----EEYTSDLAIKAAE 62 (325)
T ss_pred CCEEEEEEEECCCcEEcHHHHHHhcCCCHHHhh-----hccCceEE-----------EECCC-----CCCHHHHHHHHHH
Confidence 47899999999998 677777653211000000 00000000 00001 1235689999999
Q ss_pred HHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCCC-Cccccc
Q 008146 245 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM-GPNYSI 323 (576)
Q Consensus 245 eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~~tv 323 (576)
+||+++|+++++|+ .|++++...+ ......+.+++..||+. .+.+.|
T Consensus 63 ~al~~ag~~~~~Id-------~li~~~~~~~-------------------------~~~~~~a~~l~~~lg~~~~~~~~v 110 (325)
T PRK12879 63 RALARAGLDAEDID-------LIIVATTTPD-------------------------YLFPSTASQVQARLGIPNAAAFDI 110 (325)
T ss_pred HHHHHcCCCHHHCC-------EEEEEcCCCC-------------------------CCCChHHHHHHHHhCCCCCcEEEE
Confidence 99999999998666 5777664311 11233567899999997 488999
Q ss_pred cCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceEEEE
Q 008146 324 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 403 (576)
Q Consensus 324 ~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAaalv 403 (576)
+.+|+|++.||..|.++|++|.++.+||+++|.+.... .++.....+++||||+|+|
T Consensus 111 ~~~C~~~~~al~~A~~~l~~g~~~~~Lvv~~e~~s~~~-----------------------~~~~~~~~~~~GDgAaA~l 167 (325)
T PRK12879 111 NAACAGFLYGLETANGLITSGLYKKVLVIGAERLSKVT-----------------------DYTDRTTCILFGDGAGAVV 167 (325)
T ss_pred CccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhcCcC-----------------------CccccCceEEEeecceEEE
Confidence 99999999999999999999999999999999732110 0111234578999999999
Q ss_pred EcchHHHHhcCCeeeEEEEEEEEecCCC------------CCC--------CCCCCh--------HHHHHHHHHHHHHcC
Q 008146 404 LEELEHAKKRGAKIYAEFRGGSFTSDAY------------HMT--------EPHPDG--------VGVILCIEKALAHSG 455 (576)
Q Consensus 404 L~~~~~A~~~g~~i~a~I~g~~~~~dg~------------~~~--------~~~p~~--------~~~~~ai~~AL~~Ag 455 (576)
|++.+.. ..+ ......+++. ... ....++ .....+++++|+++|
T Consensus 168 l~~~~~~----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g 239 (325)
T PRK12879 168 LEATENE----PGF----IDYVLGTDGDGGDILYRTGLGTTMDRDALSGDGYIVQNGREVFKWAVRTMPKGARQVLEKAG 239 (325)
T ss_pred EEecCCC----CCe----EEEEEEEcCCCCCeEEEcCCCCCCCccccccCccEEEcCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9975431 111 1111111110 000 000111 123468899999999
Q ss_pred CCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCC-CcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCC
Q 008146 456 VSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENP 534 (576)
Q Consensus 456 l~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~-~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p 534 (576)
++++||||+..|..+.+. .+.+.+.++-.. ++.. ....+||+.+|+=.+.|..+ ++++.+.
T Consensus 240 ~~~~did~~~~h~~~~~~-----~~~~~~~lg~~~~~~~~--~~~~~Gn~~sas~~~~L~~~---~~~g~~~-------- 301 (325)
T PRK12879 240 LTKDDIDWVIPHQANLRI-----IESLCEKLGIPMEKTLV--SVEYYGNTSAATIPLALDLA---LEQGKIK-------- 301 (325)
T ss_pred CCHHHCCEEEECCCCHHH-----HHHHHHHcCCCHHHhhh--hHhhhCchHHHHHHHHHHHH---HHcCCCC--------
Confidence 999999999999655432 345666665432 2222 44678999988766665433 4443220
Q ss_pred CCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEe
Q 008146 535 DAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573 (576)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~ 573 (576)
+-+..+.-+||.|-+-.+++++
T Consensus 302 -----------------~Gd~vll~~~G~G~~~~~~l~~ 323 (325)
T PRK12879 302 -----------------PGDTLLLYGFGAGLTWAALLVK 323 (325)
T ss_pred -----------------CCCEEEEEEEchhhhhEEEEEE
Confidence 1245667799999888888875
|
|
| >cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Probab=99.68 E-value=8.4e-16 Score=159.58 Aligned_cols=260 Identities=21% Similarity=0.265 Sum_probs=169.5
Q ss_pred EEEEecceecCCC-CCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHHH
Q 008146 167 VVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKK 245 (576)
Q Consensus 167 IaItGmg~~~P~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa~e 245 (576)
+.|+|+|...|.- .+.+++.+.+ |... ..+ +...+ +....+..+ -.....|+.+|+++
T Consensus 2 ~~I~~i~~~lP~~~~~~~~~~~~~--~~~~-~~~--~~~~G-----------i~~r~~~~~-----~~~~~~la~~A~~~ 60 (320)
T cd00830 2 ARILGIGSYLPERVVTNDELEKRL--DTSD-EWI--RTRTG-----------IRERRIADP-----GETTSDLAVEAAKK 60 (320)
T ss_pred CEEEEEEEECCCcEEcHHHHHHHc--CCCH-HHh--hhccC-----------ceEEeeCCC-----CCCHHHHHHHHHHH
Confidence 6799999999998 6777776654 2110 000 00000 000000111 12357899999999
Q ss_pred HHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCC-CCcccccc
Q 008146 246 ALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGW-MGPNYSIS 324 (576)
Q Consensus 246 AL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl-~Gp~~tv~ 324 (576)
||+++|+++++|+ .+++++.... ......+.+++..+|+ ..|.+.|+
T Consensus 61 al~~ag~~~~~Id-------~li~~~~~~~-------------------------~~~~~~~~~l~~~lg~~~~~~~~v~ 108 (320)
T cd00830 61 ALEDAGIDADDID-------LIIVATSTPD-------------------------YLFPATACLVQARLGAKNAAAFDIN 108 (320)
T ss_pred HHHHcCCCHHHCC-------EEEEEcCCCC-------------------------CCCCcHHHHHHHHhCCCCCcEeecc
Confidence 9999999998666 5777764311 1122356789999999 55889999
Q ss_pred CCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceEEEEE
Q 008146 325 TACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLLL 404 (576)
Q Consensus 325 taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAaalvL 404 (576)
.+|+|++.||..|.++|++|.++.+||+++|.+.... -|+....++++||||+|+||
T Consensus 109 ~~C~s~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~-----------------------~~~~~~~~~~~GDgAaA~ll 165 (320)
T cd00830 109 AACSGFLYGLSTAAGLIRSGGAKNVLVVGAETLSRIL-----------------------DWTDRSTAVLFGDGAGAVVL 165 (320)
T ss_pred ccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhcccc-----------------------CcccCCceEEEeccceEEEE
Confidence 9999999999999999999999999999999843210 03344568999999999999
Q ss_pred cchHHHHhcCCeeeEEEEEEEEecCCCCC---CCCC------------------CC--------hHHHHHHHHHHHHHcC
Q 008146 405 EELEHAKKRGAKIYAEFRGGSFTSDAYHM---TEPH------------------PD--------GVGVILCIEKALAHSG 455 (576)
Q Consensus 405 ~~~~~A~~~g~~i~a~I~g~~~~~dg~~~---~~~~------------------p~--------~~~~~~ai~~AL~~Ag 455 (576)
++.+. +.. |.++...+++... ..+. .. .....++++++|+++|
T Consensus 166 ~~~~~----~~~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g 237 (320)
T cd00830 166 EATEE----DPG----ILDSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEALEKAG 237 (320)
T ss_pred EecCC----CCc----EEEEEEEEcCCCCCeEEeCCCCcCCccccccccCccEEEcChHHHHHHHHhhHHHHHHHHHHcC
Confidence 97543 222 3333333332210 0000 00 1234578999999999
Q ss_pred CCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCCCcccccccccccccccchhHHHHHHH
Q 008146 456 VSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAV 516 (576)
Q Consensus 456 l~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~ 516 (576)
++++|||++..|..+...-+ .+.+.++-..+ .+......+||+.+|+=.+.|..+
T Consensus 238 ~~~~di~~~~~h~~~~~~~~-----~~~~~lgl~~~-~~~~~~~~~Gn~~sas~~~~L~~~ 292 (320)
T cd00830 238 LTPDDIDWFVPHQANLRIIE-----AVAKRLGLPEE-KVVVNLDRYGNTSAASIPLALDEA 292 (320)
T ss_pred CCHHHCCEEEECCCCHHHHH-----HHHHHhCCCHH-HhhhhHHhhCcHHHHHHHHHHHHH
Confidence 99999999999988765433 34455553311 122344578999988877666544
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. |
| >PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.7e-14 Score=153.23 Aligned_cols=290 Identities=19% Similarity=0.238 Sum_probs=180.0
Q ss_pred CcEEEEecceecCCC-CCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 008146 165 KRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 243 (576)
Q Consensus 165 ~~IaItGmg~~~P~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa 243 (576)
..+.|+|+|...|.- .+.+++-+.+......|.+ ..++. ...+..+. .+...|+.+|+
T Consensus 46 ~~~~I~g~g~~lP~~~v~n~el~~~~~~~~~~i~~-----~tGi~-----------~R~~~~~~-----~~~~~La~~Aa 104 (379)
T PLN02326 46 SGSKLVGCGSAVPKLLITNDDLSKLVDTSDEWIAT-----RTGIR-----------NRRVLSGD-----ETLTSLAVEAA 104 (379)
T ss_pred CCcEEEEEEEECCCceecHHHHHHhcCCchhheec-----ccCcc-----------eEeecCCC-----CCHHHHHHHHH
Confidence 468899999999998 5666665433210000100 00000 00011111 23578999999
Q ss_pred HHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCCCC-cccc
Q 008146 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG-PNYS 322 (576)
Q Consensus 244 ~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~t 322 (576)
++||+++|+++++|+ -|++++..+.. .. ..+..++..||+.+ +++.
T Consensus 105 ~~aL~~agi~~~dId-------~li~~s~~~~~-------------------------~~-~~a~~v~~~LG~~~~~~~d 151 (379)
T PLN02326 105 KKALEMAGVDPEDVD-------LVLLCTSSPDD-------------------------LF-GSAPQVQAALGCTNALAFD 151 (379)
T ss_pred HHHHHHcCCCHHHCC-------EEEEEeCCCCc-------------------------cC-cHHHHHHHHhCCCCCceee
Confidence 999999999998666 46666543110 01 13567888999965 7899
Q ss_pred ccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceEEE
Q 008146 323 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 402 (576)
Q Consensus 323 v~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAaal 402 (576)
|+.+|++++.||+.|.++|++|.++.+||+|+|.+... + .|++..+.+++||||+|+
T Consensus 152 v~~~Ca~~~~aL~~A~~~l~~g~~~~vLVv~~e~~s~~-----------~------------~~~d~~~~~lfGDGAaAv 208 (379)
T PLN02326 152 LTAACSGFVLGLVTAARFIRGGGYKNVLVIGADALSRY-----------V------------DWTDRGTCILFGDGAGAV 208 (379)
T ss_pred ccccchHHHHHHHHHHHHHHcCCCCEEEEEEechhcCC-----------C------------CccccCceEEEcceeEEE
Confidence 99999999999999999999999999999999973211 0 022334567899999999
Q ss_pred EEcchHHHHhcCCeeeEEEEEEEEecCCCC-----------------------CCCC---------CCCh--------HH
Q 008146 403 LLEELEHAKKRGAKIYAEFRGGSFTSDAYH-----------------------MTEP---------HPDG--------VG 442 (576)
Q Consensus 403 vL~~~~~A~~~g~~i~a~I~g~~~~~dg~~-----------------------~~~~---------~p~~--------~~ 442 (576)
||++.+... ..+ .++.+.+++.+ ...+ ..++ ..
T Consensus 209 lL~~~~~~~---~~i----~~~~~~t~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~ 281 (379)
T PLN02326 209 VLQACDDDE---DGL----LGFDMHSDGNGHKHLHATFKGEDDDSSGGNTNGVGDFPPKKASYSCIQMNGKEVFKFAVRC 281 (379)
T ss_pred EEEEcCCCC---Cce----EEEEEEEcCCCCCeEEecCCCCcccccccccccccccccccccccceEecCHHHHHHHHHH
Confidence 999753221 111 12111111100 0000 0011 11
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCC-CcccccccccccccccchhHHHHHHHHHHHH
Q 008146 443 VILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAIAVVQAIR 521 (576)
Q Consensus 443 ~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~-~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~ 521 (576)
..++++++|+++|++++|||+|..|-.+..+ .+.+.+.++-.. ++. ... ..+||+.+|+=.+.|..+ ++
T Consensus 282 ~~~~i~~~L~~~gl~~~dId~~v~Hq~n~~~-----~~~~~~~Lgl~~ek~~-~~l-~~~GNt~sAsi~~~L~~~---~~ 351 (379)
T PLN02326 282 VPQVIESALQKAGLTAESIDWLLLHQANQRI-----IDAVAQRLGIPPEKVI-SNL-ANYGNTSAASIPLALDEA---VR 351 (379)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCCCHHH-----HHHHHHHcCCCHHHee-ecH-hhcCcHHHHHHHHHHHHH---HH
Confidence 2357889999999999999999999776543 233555555432 222 223 578999888765555433 33
Q ss_pred cCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEe
Q 008146 522 TGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573 (576)
Q Consensus 522 ~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~ 573 (576)
.+.+ .+-+.++..+||.|-+-.+++++
T Consensus 352 ~g~~-------------------------~~Gd~vll~~~G~G~t~~~~ll~ 378 (379)
T PLN02326 352 SGKV-------------------------KKGDVIATAGFGAGLTWGSAIVR 378 (379)
T ss_pred cCCC-------------------------CCCCEEEEEEEChhheeeEEEEE
Confidence 3322 12355677899999888888875
|
|
| >KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.1e-15 Score=147.32 Aligned_cols=239 Identities=20% Similarity=0.329 Sum_probs=167.1
Q ss_pred HHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCC-
Q 008146 238 YLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGW- 316 (576)
Q Consensus 238 l~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl- 316 (576)
|+..+....+|+.+++|..+.+ |++|+...... .++-+...+++-|+
T Consensus 64 Ll~~vl~a~ie~t~~dp~~igd-------i~vG~vL~pg~-------------------------ga~e~R~a~~~ag~P 111 (435)
T KOG1389|consen 64 LLAAVLRAVIEKTNLDPSLIGD-------IVVGTVLAPGS-------------------------GASECRMAAFYAGFP 111 (435)
T ss_pred HHHHHHHHHHhhcCCCHHHhcc-------eeeeeccCCCc-------------------------chHHHHHHHHHcCCC
Confidence 4555667778999999986663 77777543211 12233444555566
Q ss_pred -CCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchh--hh--------HHH-------------------
Q 008146 317 -MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI--GL--------GGF------------------- 366 (576)
Q Consensus 317 -~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~--~~--------~~~------------------- 366 (576)
+-|..+|+..|+|||+|+..-+..|+.|.+|.-|.+|+|+|.+.+ .+ ..+
T Consensus 112 ~tvpv~tvNRqCsSGLqaVadiA~~Ir~G~ydIGla~GvESMt~~~~~g~~g~~~~~~~~~~~A~dCllpmGitsEnva~ 191 (435)
T KOG1389|consen 112 ETVPVRTVNRQCSSGLQAVADIAAKIRAGFYDIGLAAGVESMTTNYPRGWPGSINPRLQKFEKARDCLLPMGITSENVAE 191 (435)
T ss_pred cccchhhhhhhhhhHHHHHHHHHHHHhcCceeeecccchhhhcccCCCCCccccChhhhhhhHHhhcccccccchHHHHH
Confidence 469999999999999999999999999999999999999986542 10 000
Q ss_pred ---------------HHhhhhh---------------ccCCCCCCCCCC------------------------CccC---
Q 008146 367 ---------------VACRALS---------------QRNNDPTKASRP------------------------WDIN--- 389 (576)
Q Consensus 367 ---------------~~~~~ls---------------~~~~~p~~~~rp------------------------fd~~--- 389 (576)
+..+... +...+|.+.-+| |.++
T Consensus 192 rfgvsR~eqD~~Av~S~kkAa~A~~~G~f~dEIiPv~tkv~D~~g~~k~i~v~~DeGiRp~ttl~~l~klkpvFkkdGtt 271 (435)
T KOG1389|consen 192 RFGVSREEQDEAAVDSHKKAAAATAKGKFKDEIIPVKTKVVDPKGDEKPITVSVDEGIRPNTTLESLAKLKPVFKKDGTT 271 (435)
T ss_pred HhCCChhhhhHHHHHHHHHHHHHhhcCcchhheeeeeeeccCCcCCccceeEecCCCCCCCcchhHHhhcchhhhcCCcc
Confidence 0000000 001123322222 2222
Q ss_pred --CCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEec
Q 008146 390 --RDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAH 467 (576)
Q Consensus 390 --~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~H 467 (576)
.+..-.+||+++++|.+...|.+.|.+|+++++.+.... ..|...+-+...+|.++|+.+|+..+|||++|+
T Consensus 272 TagNsSQvSDGa~aVLLmkRs~A~qlgLPvlgvfr~f~~vG-----v~P~iMGiGPavAIp~alk~aGL~v~did~FEI- 345 (435)
T KOG1389|consen 272 TAGNSSQVSDGAGAVLLMKRSVAMQLGLPVLGVFRDFAAVG-----VPPAIMGIGPAVAIPKALKAAGLEVDDIDLFEI- 345 (435)
T ss_pred ccCchhhcccchhhhhhhhhhhHhhcCCceeEEeeeeeeec-----CCHHHcCCCchhhhHHHHHHcCCcccccceeeh-
Confidence 122236899999999999999999999999999987652 234445666789999999999999999999995
Q ss_pred CCCCccCcHHHHHHHHHHHcC------CCCcccccccccccccccchhHHHHHHHHHHHHcC
Q 008146 468 ATSTPAGDIKEYQALIHCFGQ------NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTG 523 (576)
Q Consensus 468 gtgt~~gD~~E~~Al~~~f~~------~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g 523 (576)
.|+-|-+-+|.- ..+++++...-.+||++||+|+..++..+..|++.
T Consensus 346 ---------NEAFAsQ~~yc~~KL~ld~ekVN~~GGaiAlGHPlGatGAR~VaTlL~emKrr 398 (435)
T KOG1389|consen 346 ---------NEAFASQALYCRNKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKRR 398 (435)
T ss_pred ---------hHHHHHHHHHHHHHhCCCHHHcCCCCceeeccCCcCCccHhHHHHHHHHHHhh
Confidence 233333333321 12466777777899999999999999999999874
|
|
| >CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=3e-14 Score=148.56 Aligned_cols=286 Identities=17% Similarity=0.225 Sum_probs=177.3
Q ss_pred EEEEecceecCCC-CCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHHH
Q 008146 167 VVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKK 245 (576)
Q Consensus 167 IaItGmg~~~P~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa~e 245 (576)
+-|+|+|...|.- .+.+++-+.+......|. .+ .....+ .+..+ -.....|+.+++++
T Consensus 3 v~I~~~g~~lP~~~v~~~e~~~~~~~~~~~i~--~~---~gi~~r-----------~~~~~-----~~~~~~la~~A~~~ 61 (326)
T CHL00203 3 VHILSTGSSVPNFSVENQQFEDIIETSDHWIS--TR---TGIKKR-----------HLAPS-----STSLTKLAAEAANK 61 (326)
T ss_pred cEEEEEEEECCCeEEcHHHHHHhcCCChhhEe--ec---cCeEEE-----------EeCCC-----CCCHHHHHHHHHHH
Confidence 6799999999998 666766554321000111 00 000000 00111 11247799999999
Q ss_pred HHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCCCC-cccccc
Q 008146 246 ALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG-PNYSIS 324 (576)
Q Consensus 246 AL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv~ 324 (576)
||+++|+++++|+ .|++|+..... .. ..+..++..||+++ +++.|+
T Consensus 62 aL~~ag~~~~dId-------~vi~~s~~~~~-------------------------~~-~~~~~v~~~Lg~~~~~~~~v~ 108 (326)
T CHL00203 62 ALDKAHMDPLEID-------LIILATSTPDD-------------------------LF-GSASQLQAEIGATRAVAFDIT 108 (326)
T ss_pred HHHHcCCCHHHCC-------EEEEEeCCCCC-------------------------CC-chHHHHHHHhCCCCCceeeec
Confidence 9999999998776 57777643110 00 12456788899876 789999
Q ss_pred CCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceEEEEE
Q 008146 325 TACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLLL 404 (576)
Q Consensus 325 taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAaalvL 404 (576)
.+|+|++.||..|.++|++|.++.+||+|+|.+..-. .++.....+++|||++|+||
T Consensus 109 ~~Casg~~al~~A~~~i~sg~~~~~Lvv~~e~~s~~~-----------------------~~~~~~~~~~fgDga~A~ll 165 (326)
T CHL00203 109 AACSGFILALVTATQFIQNGSYKNILVVGADTLSKWI-----------------------DWSDRKTCILFGDGAGAAII 165 (326)
T ss_pred ccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhhCcC-----------------------CcccCCceEEEcceeeEEEE
Confidence 9999999999999999999999999999999842110 11222356789999999999
Q ss_pred cchHHHHhcCCeeeEEEEEEEEecCCCC-----C-----------CCCCC---------Ch--------HHHHHHHHHHH
Q 008146 405 EELEHAKKRGAKIYAEFRGGSFTSDAYH-----M-----------TEPHP---------DG--------VGVILCIEKAL 451 (576)
Q Consensus 405 ~~~~~A~~~g~~i~a~I~g~~~~~dg~~-----~-----------~~~~p---------~~--------~~~~~ai~~AL 451 (576)
++.+. . . |.++...+|+.. . ....| ++ .....+++++|
T Consensus 166 ~~~~~---~--~----~~~~~~~t~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L 236 (326)
T CHL00203 166 GASYE---N--S----ILGFKLCTDGKLNSHLQLMNKPVNNQSFGTTKLPQGQYQSISMNGKEVYKFAVFQVPAVIIKCL 236 (326)
T ss_pred EEcCC---C--C----eEEEEEEEcCCCcceEEecCCCCCcccccccccccCCcceEEECCHHHHHHHHHHHHHHHHHHH
Confidence 86432 1 1 122222222110 0 00001 11 12345789999
Q ss_pred HHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCC-CcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCC
Q 008146 452 AHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNIN 530 (576)
Q Consensus 452 ~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~-~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~ 530 (576)
+++|++++|||++..|-.+... .+++.+.++-.. ++. .+-..+||+.+|+=.+.|..+ +++|.+.
T Consensus 237 ~~~g~~~~did~~~~hq~~~~~-----~~~~~~~lgl~~~k~~--~~l~~~Gn~~sasi~~~L~~~---~~~g~~~---- 302 (326)
T CHL00203 237 NALNISIDEVDWFILHQANKRI-----LEAIANRLSVPNSKMI--TNLEKYGNTSAASIPLALDEA---IQNNKIQ---- 302 (326)
T ss_pred HHcCCCHHHCCEEEECCCCHHH-----HHHHHHHhCCCHHHhh--hHHHhhCcHHHHHHHHHHHHH---HHhCCCC----
Confidence 9999999999999999776543 334555555332 221 233578998877655544333 3444331
Q ss_pred CCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEe
Q 008146 531 LENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573 (576)
Q Consensus 531 ~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~ 573 (576)
+-+..+..+||.|=+-..++++
T Consensus 303 ---------------------~Gd~vll~~~G~G~s~~~~v~~ 324 (326)
T CHL00203 303 ---------------------PGQIIVLSGFGAGLTWGAIVLK 324 (326)
T ss_pred ---------------------CCCEEEEEEEchhhhheEEEEE
Confidence 1245666788888777777764
|
|
| >KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.5e-15 Score=141.63 Aligned_cols=245 Identities=25% Similarity=0.405 Sum_probs=170.5
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
+..|...+++.||..+++.++.+| .|++|+..... .-.-.++.++....
T Consensus 28 aTdL~~~AakAAL~aa~v~~e~VD-------~VI~GNV~aSS------------------------sDgIYl~RHvGL~~ 76 (396)
T KOG1391|consen 28 ATDLGVVAAKAALKAANVGAEAVD-------HVIMGNVLASS------------------------SDGIYLARHVGLRV 76 (396)
T ss_pred hhhHHHHHHHHHHhhcCCChhhcc-------eEEEeeeeecc------------------------CCceEeeecccccc
Confidence 456788899999999999988555 57777542100 00111223333333
Q ss_pred CC--CCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhh---------------------hH----HHH
Q 008146 315 GW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG---------------------LG----GFV 367 (576)
Q Consensus 315 gl--~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~---------------------~~----~~~ 367 (576)
|. .-|..+|+.-|.|+.++|-.+++.|.-|+.+++|+||+|.|...+. +. .+.
T Consensus 77 GvP~e~pALtiNRLCGSGFQsiVNgaQ~I~vgea~ivL~GGtEnMSq~Pf~vRnvRFGT~LG~~y~lED~LW~sLtD~y~ 156 (396)
T KOG1391|consen 77 GVPKETPALTINRLCGSGFQSIVNGAQEICVGEAEIVLCGGTENMSQAPFCVRNVRFGTKLGSDYKLEDSLWVSLTDQYV 156 (396)
T ss_pred CCcCccCceeehhhhcccHHHHHhhHHHhhcCcceEEEecCccccccCcceeeeeeeccccccccchhhhHhhhccchhh
Confidence 43 3589999999999999999999999999999999999998742110 00 000
Q ss_pred H-----------------------hhhhhccC-----------C----------------CCCCCCCC------------
Q 008146 368 A-----------------------CRALSQRN-----------N----------------DPTKASRP------------ 385 (576)
Q Consensus 368 ~-----------------------~~~ls~~~-----------~----------------~p~~~~rp------------ 385 (576)
+ ....|+.. + .-+...||
T Consensus 157 kLpMa~TAEnL~~qyKisRee~DefaL~SQ~~Wkkaq~aG~fn~Ei~pI~~K~kkge~~f~vDEHpRp~TT~E~L~KLpp 236 (396)
T KOG1391|consen 157 KLPMAMTAENLAVQYKISREECDEFALQSQQRWKKAQDAGYFNDEIAPIEVKTKKGEQTFQVDEHPRPQTTLEQLQKLPP 236 (396)
T ss_pred hcchhhhHHHhhhhheecHHHhhHHHhhhHHHHHhhhhcCcccccccceEEeeccCceeeEecCCCCccchHHHHhhCCc
Confidence 0 00001000 0 01122232
Q ss_pred -CccCCCcce-------ecCceEEEEEcchHHHHhcCCeeeEEEEEEEEe-cCCCCCCCCCCChHHHHHHHHHHHHHcCC
Q 008146 386 -WDINRDGFV-------MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFT-SDAYHMTEPHPDGVGVILCIEKALAHSGV 456 (576)
Q Consensus 386 -fd~~~~G~v-------~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~-~dg~~~~~~~p~~~~~~~ai~~AL~~Agl 456 (576)
|. .||.+ +.||++++++.+++..++.+.+++++|.++.+. +| |...+.+..-+|+.+|+.+|+
T Consensus 237 vFk--KdG~VtAGnASGi~DGA~AvivAsEdavK~~NlkPLARiVays~vGcd------P~IMGIGPvPAI~~vLKksGl 308 (396)
T KOG1391|consen 237 VFK--KDGTVTAGNASGIADGAGAVIVASEDAVKKHNLKPLARIVAYSVVGCD------PSIMGIGPVPAISGVLKKSGL 308 (396)
T ss_pred hhc--cCCeeeccccccccCCceeEEEechhHHhhcCCchhhhhheeeeeccC------hhhccccCcHHHHHHHHHcCC
Confidence 22 34544 579999999999999999999999999999864 33 333444556789999999999
Q ss_pred CCCCccEEEecCCCCccCcHHHHHHHHHHHcCC-CCcccccccccccccccchhHHHHHHHHHHHHcC
Q 008146 457 SREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTG 523 (576)
Q Consensus 457 ~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g 523 (576)
..+|||.||.+-...+ ...+..+.++-+ .+++|+...-.+||++||||..-....+..|+++
T Consensus 309 kl~DiDl~EvNEAFAp-----Q~LAv~r~L~ld~sKlNVNGGAIALGHPLgaSGsRIt~HlVHEL~Rr 371 (396)
T KOG1391|consen 309 KLKDIDLVEVNEAFAP-----QYLAVERSLDLDISKLNVNGGAIALGHPLGASGSRITAHLVHELRRR 371 (396)
T ss_pred cccccceEEechhhch-----HHHHHHHhhCCChhhccccCceeeccCccccCcchhhHHHHHHHHHc
Confidence 9999999998654443 345556666543 4578888888899999999999988888888764
|
|
| >PRK06840 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.6e-13 Score=143.82 Aligned_cols=289 Identities=17% Similarity=0.174 Sum_probs=175.6
Q ss_pred cEEEEecceecCCC-CCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 008146 166 RVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 244 (576)
Q Consensus 166 ~IaItGmg~~~P~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa~ 244 (576)
.|-|+|+|...|.. .+.+++-+........+. ++ .++ .... +. ..-.....|+.+|++
T Consensus 4 ~v~I~~~~~~lP~~~v~~~~l~~~~g~~~~~~~--~~---~Gi-----------~~r~-~~----~~~~~~~~la~~Aa~ 62 (339)
T PRK06840 4 NVGIVGTGVYLPKDVMTAEEIAEKTGIPEEVVI--EK---FGI-----------YEKP-VP----GPEDHTSDMAIAAAK 62 (339)
T ss_pred ceEEEEEEEeCCCcccCHHHHHHHhCCCHHHHh--hh---cCc-----------ceEe-eC----CCCCCHHHHHHHHHH
Confidence 58999999999998 566665433211000000 00 000 0000 11 111235789999999
Q ss_pred HHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCCCC-ccccc
Q 008146 245 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG-PNYSI 323 (576)
Q Consensus 245 eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv 323 (576)
+||+++|+++++|+ .+++.++.. +.......+.+++..+|++. +.+.|
T Consensus 63 ~aL~~ag~~~~dId-------~li~~~~~~------------------------~~~~~p~~a~~l~~~lGl~~~~~~~v 111 (339)
T PRK06840 63 PALKQAGVDPAAID-------VVIYIGSEH------------------------KDYPVWSSAPKIQHEIGAKNAWAFDI 111 (339)
T ss_pred HHHHHcCCCHHHCC-------EEEEeccCC------------------------CCCCCCchHHHHHHHhCCCCcccccc
Confidence 99999999998665 454433210 11112234678999999965 78889
Q ss_pred cCCCchHHHHHHHHHHHHHc-CCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcc--eecCceE
Q 008146 324 STACATSNFCILNAANHIIR-GEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGF--VMGEGAG 400 (576)
Q Consensus 324 ~taCaSgl~AL~~A~~~I~~-G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~--v~gEGAa 400 (576)
..+|++++.||..|.++|++ |.++.+||.+.|..... + . |+....++ .+||||+
T Consensus 112 ~~~C~~~~~al~~A~~~l~~~g~~~~~Lvv~~~~~s~~-----------~-----------~-~~~~~~~~~~~~GDgAa 168 (339)
T PRK06840 112 MAVCASFPIALKVAKDLLYSDPSIENVLLVGGYRNSDL-----------V-----------D-YDNPRTRFMFNFAAGGS 168 (339)
T ss_pred cccchHHHHHHHHHHHHHhcCCCccEEEEEeecccccc-----------c-----------C-cCCCCeeeeccCCCcee
Confidence 99999999999999999999 99999999998862110 0 0 11112232 3699999
Q ss_pred EEEEcchHHHHhcCCeeeEEEEEEEEecCCCC------------CC-CC-------------CCC----------hHHHH
Q 008146 401 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYH------------MT-EP-------------HPD----------GVGVI 444 (576)
Q Consensus 401 alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~------------~~-~~-------------~p~----------~~~~~ 444 (576)
|+||++.+. +.. |.+....+|+.. .. .+ .+. .....
T Consensus 169 A~ll~~~~~----~~~----il~~~~~t~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (339)
T PRK06840 169 AALLKKDAG----KNR----ILGSAIITDGSFSEDVRVPAGGTKQPASPETVENRQHYLDVIDPESMKERLDEVSIPNFL 240 (339)
T ss_pred EEEEEecCC----CCc----eEEEEEEEcCCccceEEecCCCcCCCCcccccccccceEEEcCcHHHHHHhHhhHHHHHH
Confidence 999987432 122 233222222210 00 00 000 01245
Q ss_pred HHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCC-CcccccccccccccccchhHHHHHHHHHHHHcC
Q 008146 445 LCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTG 523 (576)
Q Consensus 445 ~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~-~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g 523 (576)
++++++|+++|++++|||++-.|-.+... .+.+.+.++-.. +.. ....+||+.+|+=.+.|... ++.+
T Consensus 241 ~~i~~~L~~~gl~~~did~~~~h~~~~~~-----~~~~~~~Lgl~~~~~~---~~~~~Gn~~sas~~~~L~~~---~~~~ 309 (339)
T PRK06840 241 KVIREALRKSGYTPKDIDYLAILHMKRSA-----HIALLEGLGLTEEQAI---YLDEYGHLGQLDQILSLHLA---LEQG 309 (339)
T ss_pred HHHHHHHHHcCCCHHHCCEEEECCcCHHH-----HHHHHHHcCCCHHHeE---eHHhccchhhhhHHHHHHHH---HHcC
Confidence 78999999999999999999887554432 334555555331 122 24578999887766555433 3332
Q ss_pred CCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEe
Q 008146 524 WIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573 (576)
Q Consensus 524 ~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~ 573 (576)
.+ .+-...+..+||.|.+-..++++
T Consensus 310 ~~-------------------------~~Gd~ill~~~G~G~s~~~~~l~ 334 (339)
T PRK06840 310 KL-------------------------KDGDLVVLVSAGTGYTWAATVIR 334 (339)
T ss_pred CC-------------------------CCCCEEEEEEEehhhheeEEEEE
Confidence 22 02245677899999998888876
|
|
| >cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes | Back alignment and domain information |
|---|
Probab=99.57 E-value=8.8e-14 Score=144.70 Aligned_cols=286 Identities=19% Similarity=0.187 Sum_probs=177.8
Q ss_pred EEEEecceecCCC-CCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHHH
Q 008146 167 VVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKK 245 (576)
Q Consensus 167 IaItGmg~~~P~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa~e 245 (576)
|-|+++|...|.- .+.+++.+.+. ...+... .+... .. |..+ -.....|+.+++++
T Consensus 2 v~I~~i~~~lP~~~v~~~~~~~~~~--~~~~~~~-----~gi~~------r~-----~~~~-----~~~~~~l~~~a~~~ 58 (324)
T cd00827 2 VGIEAIGAYLPRYRVDNEELAEGLG--VDPGKYT-----TGIGQ------RH-----MAGD-----DEDVPTMAVEAARR 58 (324)
T ss_pred ccEEEEEecCCceeecHHHHHHHhC--CCcceee-----eecce------eE-----ecCC-----CCCHHHHHHHHHHH
Confidence 6799999999988 67777765432 1100000 00000 00 0000 12247799999999
Q ss_pred HHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCC-CCcccccc
Q 008146 246 ALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGW-MGPNYSIS 324 (576)
Q Consensus 246 AL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl-~Gp~~tv~ 324 (576)
||+++|+++++|+ .|++++..... .....+.+++..+|+ ..|.++|+
T Consensus 59 aL~~ag~~~~~Id-------~li~~~~~~~~-------------------------~~~~~~~~i~~~lg~~~~~~~~v~ 106 (324)
T cd00827 59 ALERAGIDPDDIG-------LLIVATESPID-------------------------KGKSAATYLAELLGLTNAEAFDLK 106 (324)
T ss_pred HHHHcCCCHHHCC-------EEEEEcCCCCC-------------------------CCccHHHHHHHHcCCCCCceeehh
Confidence 9999999998776 67777653110 122356788999999 46899999
Q ss_pred CCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceEEEEE
Q 008146 325 TACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLLL 404 (576)
Q Consensus 325 taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAaalvL 404 (576)
.+|+|++.||..|+++|++|.++.+||+++|.+.... .+.+.+++++|||++|+||
T Consensus 107 ~~C~s~~~al~~A~~~i~~g~~~~vlvv~~e~~~~~~------------------------~~~~~~~~~~gdgaaA~ll 162 (324)
T cd00827 107 QACYGGTAALQLAANLVESGPWRYALVVASDIASYLL------------------------DEGSALEPTLGDGAAAMLV 162 (324)
T ss_pred hhhHHHHHHHHHHHHHHHcCCCCEEEEEEEHHhhhcc------------------------cCCCCccccccCceEEEEE
Confidence 9999999999999999999999999999999843221 1234578999999999999
Q ss_pred cchHHHHhcCCeeeEEEEEEEEecCCCC---------CCC-------------CCC--------ChHHHHHHHHHHHHHc
Q 008146 405 EELEHAKKRGAKIYAEFRGGSFTSDAYH---------MTE-------------PHP--------DGVGVILCIEKALAHS 454 (576)
Q Consensus 405 ~~~~~A~~~g~~i~a~I~g~~~~~dg~~---------~~~-------------~~p--------~~~~~~~ai~~AL~~A 454 (576)
++.+... +..+ .+....+++.. ... .+. .......+++++|+++
T Consensus 163 ~~~~~~~--~~~i----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 236 (324)
T cd00827 163 SRNPGIL--AAGI----VSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKVVRKALDRA 236 (324)
T ss_pred ecCcccc--cCCc----eeeeeecccccccCccceeccCCCcchhhhhhcceeecCCccchHHHHhHHHHHHHHHHHHHc
Confidence 9765420 1122 22222222110 000 010 0234567889999999
Q ss_pred CCCCCCccEEEecCCCC-ccCcHHHHHHHHHHHcCC-CCcccc--cccccccccccchhHHHHHHHHHHHHcCCCCCCCC
Q 008146 455 GVSREDVNYINAHATST-PAGDIKEYQALIHCFGQN-RGLRVN--STKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNIN 530 (576)
Q Consensus 455 gl~~~dId~ve~Hgtgt-~~gD~~E~~Al~~~f~~~-~~~~v~--s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~ 530 (576)
|++ +||+|+..|-.+. ..-+ .+.+.++-. ..+... ..-..+||+.+|+-.+.|-.+ ++++.+.
T Consensus 237 ~~~-~~i~~~~~h~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~---~~~~~~~---- 303 (324)
T cd00827 237 GLS-EDIDYFVPHQPNGKKILE-----AVAKKLGGPPEKASQTRWILLRRVGNMYAASILLGLASL---LESGKLK---- 303 (324)
T ss_pred ccc-cccceeeccCchHHHHHH-----HHHHHccchHhhhccchhhHHHHhCchHHHHHHHHHHHH---HhcCCCC----
Confidence 999 9999999997665 3222 222333211 111111 234567998877755555443 3333220
Q ss_pred CCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEE
Q 008146 531 LENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSII 571 (576)
Q Consensus 531 ~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vi 571 (576)
+.+..+.-+||.|-+-.+++
T Consensus 304 ---------------------~Gd~vl~~~~G~G~~~~~~~ 323 (324)
T cd00827 304 ---------------------AGDRVLLFSYGSGFTAEAFV 323 (324)
T ss_pred ---------------------CCCEEEEEEeccchhheecc
Confidence 23456677888887665554
|
They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues. |
| >PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.54 E-value=7.6e-13 Score=137.99 Aligned_cols=290 Identities=17% Similarity=0.200 Sum_probs=174.4
Q ss_pred cEEEEecceecCCC-CCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 008146 166 RVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 244 (576)
Q Consensus 166 ~IaItGmg~~~P~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa~ 244 (576)
.+.|+|+|...|.- .+.+++-+.+ |.+ +.|-... . ......+..+. .....|+.+|++
T Consensus 3 ~~~I~~~g~~lP~~~v~~~~~~~~~--~~~-----~~~i~~~-----~----Gi~~r~~~~~~-----e~~~~la~~Aa~ 61 (326)
T PRK05963 3 SSRIAGFGHAVPDRRVENAEIEAQL--GLE-----TGWIERR-----T----GIRCRRWAAPD-----ETLSDLAASAGD 61 (326)
T ss_pred ccEEEEEEEECCCCeecHHHHHHHc--CCC-----HHHhhhc-----c----CCeEEEEcCCC-----CCHHHHHHHHHH
Confidence 47899999999998 5666665432 111 1100000 0 00000001111 124689999999
Q ss_pred HHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCCCC-ccccc
Q 008146 245 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG-PNYSI 323 (576)
Q Consensus 245 eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv 323 (576)
+||+++|+++++|+ -+++++... ....+..+.+++..||+.. +++.|
T Consensus 62 ~aL~~ag~~~~~Id-------~li~~t~~~-------------------------d~~~p~~a~~v~~~Lg~~~~~~~di 109 (326)
T PRK05963 62 MALSDAGIERSDIA-------LTLLATSTP-------------------------DHLLPPSAPLLAHRLGLQNSGAIDL 109 (326)
T ss_pred HHHHHcCCCHHHCC-------EEEEECCCC-------------------------CCCCCcHHHHHHHHhCCCCCceeec
Confidence 99999999998666 567776531 1123345678999999954 88999
Q ss_pred cCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceEEEE
Q 008146 324 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 403 (576)
Q Consensus 324 ~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAaalv 403 (576)
..+|++++.||..|..+|+.|. +.+||+++|.... .+. .+....++++||||+|+|
T Consensus 110 ~~~C~g~~~aL~~A~~~l~~~~-~~aLVv~~d~~s~-----------~~~------------~~~~~~~~lfGDgA~A~l 165 (326)
T PRK05963 110 AGACAGFLYALVLADGFVRAQG-KPVLVVAANILSR-----------RIN------------MAERASAVLFADAAGAVV 165 (326)
T ss_pred cchhhHHHHHHHHHHHHHHcCC-CeEEEEEechhhc-----------cCC------------ccccCceEEEeecceEEE
Confidence 9999999999999999999985 8899999986310 011 111235688999999999
Q ss_pred EcchHHHHhcCCeeeEEEEEEEEecCCCC------------C-----------CCCCCC--------hHHHHHHHHHHHH
Q 008146 404 LEELEHAKKRGAKIYAEFRGGSFTSDAYH------------M-----------TEPHPD--------GVGVILCIEKALA 452 (576)
Q Consensus 404 L~~~~~A~~~g~~i~a~I~g~~~~~dg~~------------~-----------~~~~p~--------~~~~~~ai~~AL~ 452 (576)
|++.+.. ... |.+....+++.. . .....+ .....++++++|+
T Consensus 166 l~~~~~~---~~~----~l~~~~~t~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 238 (326)
T PRK05963 166 LAPSAKA---NSG----VLGSQLISDGSHYDLIKIPAGGSARPFAPERDASEFLMTMQDGRAVFTEAVRMMSGASQNVLA 238 (326)
T ss_pred EEecCCC---CCc----eEEEEEEEcCCCCCeEEeCCCCcCCCCcccccccccceEecCCHHHHHHHHHHHHHHHHHHHH
Confidence 9864321 111 111112111110 0 000001 1223468889999
Q ss_pred HcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCC
Q 008146 453 HSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLE 532 (576)
Q Consensus 453 ~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~ 532 (576)
++|++++|||++..|-.+... .+.+.+.++-.+...+ ..-..+||+.+|+=.+.|- ..++.+.+
T Consensus 239 ~~gl~~~did~~~~h~~~~~~-----~~~~~~~l~l~~~k~~-~~l~~~Gn~~sas~~~~L~---~~~~~~~~------- 302 (326)
T PRK05963 239 SAAMTPQDIDRFFPHQANARI-----VDKVCETIGIPRAKAA-STLETYGNSSAATIPLSLS---LANLEQPL------- 302 (326)
T ss_pred HcCCCHHHCCEEEeCCCCHHH-----HHHHHHHcCCCHHHhh-hhHHhhCcHHHHHHHHHHH---HHHHhCCC-------
Confidence 999999999999999665442 3334444443211111 2225679986665444332 22333221
Q ss_pred CCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEe
Q 008146 533 NPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573 (576)
Q Consensus 533 ~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~ 573 (576)
.+-+.++..+||.|-+-.++|++
T Consensus 303 ------------------~~Gd~vll~~~G~G~~~~~~ll~ 325 (326)
T PRK05963 303 ------------------REGERLLFAAAGAGMTGGAVVMR 325 (326)
T ss_pred ------------------CCCCEEEEEEEehhhhheeeEEe
Confidence 02255677899999888888875
|
|
| >TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative | Back alignment and domain information |
|---|
Probab=99.54 E-value=5.8e-13 Score=139.79 Aligned_cols=238 Identities=20% Similarity=0.238 Sum_probs=153.8
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
...|+.+|+++||+++|+++++|+ .+++++..+.+ ..+..+..++..+
T Consensus 50 ~~~la~~Aa~~aL~~agl~~~dID-------~li~~s~~~~~-------------------------~~p~~a~~v~~~L 97 (345)
T TIGR00748 50 TATIGVEAARNALKRAKIDPKDIG-------AVYVGSESHPY-------------------------AVKPTATIVAEAI 97 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCCCc-------------------------cccchHHHHHHHc
Confidence 468999999999999999998776 57776643211 1122356788899
Q ss_pred CCC--CccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCc
Q 008146 315 GWM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDG 392 (576)
Q Consensus 315 gl~--Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G 392 (576)
|+. -+.+.|..+|+++..||..|..+|++|.++.+||.+.|.+.. +|.. ..-
T Consensus 98 Gl~~~~~~~dv~~aC~g~~~al~~A~~~i~sg~~~~vLVv~~d~~~~------------------~~~~--------~~~ 151 (345)
T TIGR00748 98 GATPDLTAADLEFACKAGTAGIQACMGLVASGMIKYGLAIGADTAQG------------------APGD--------ALE 151 (345)
T ss_pred CCCCCceEEEHHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeccc------------------CCCc--------cCc
Confidence 985 378899999999999999999999999999999999997420 0111 111
Q ss_pred ceecCceEEEEEcchHHHHhcCCeeeEEEEEEE-EecCCCC---C-CCCCC-----------ChHHHHHHHHHHHHHcCC
Q 008146 393 FVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGS-FTSDAYH---M-TEPHP-----------DGVGVILCIEKALAHSGV 456 (576)
Q Consensus 393 ~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~-~~~dg~~---~-~~~~p-----------~~~~~~~ai~~AL~~Agl 456 (576)
+..|||++|+||++.+. ...+.+.. ...|+.. . ....+ .......+++++|+++|+
T Consensus 152 ~~~GDGAaA~vl~~~~~--------~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl 223 (345)
T TIGR00748 152 YTAGAGGAAYIIGEKNT--------VAYFEGTYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFHHVVTAAKGLMEKLGL 223 (345)
T ss_pred ccCCCceEEEEEccCCc--------ceEeecccceecccccccccCCCcCCCcCCeecChHHHHHHHHHHHHHHHHHcCC
Confidence 45699999999986331 11222211 1112110 0 00001 012233788899999999
Q ss_pred CCCCccEEEecCCCCccCcHHHHHHHHHHHcCCC-CcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCC
Q 008146 457 SREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPD 535 (576)
Q Consensus 457 ~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~-~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~ 535 (576)
+++|||++..|-.+..+ .+.+.+.++-.. .+...-.-..+||+.+|+=.+.|...+ + .+ +
T Consensus 224 ~~~did~~i~Hq~~~~~-----~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~---~--~~-------~-- 284 (345)
T TIGR00748 224 TPEDFDYAVFHQPNGKF-----YLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVL---D--IA-------E-- 284 (345)
T ss_pred CHHHcCEEEeCCCChHH-----HHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHH---H--hc-------C--
Confidence 99999999999665542 223445555321 122111124689998887666665443 1 11 0
Q ss_pred CCCCcccccCCcccccCccEEEEeccCCCcceeEEEEe
Q 008146 536 AVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573 (576)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~ 573 (576)
+-+.++..+||.|-+...++++
T Consensus 285 ----------------~Gd~vll~~~G~G~s~~~~~~~ 306 (345)
T TIGR00748 285 ----------------PGDRILAVSYGSGAGSDAFSIV 306 (345)
T ss_pred ----------------CCCEEEEEEecCCcceeEEEEE
Confidence 1235667789988888888774
|
Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound. |
| >PRK04262 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.6e-12 Score=136.66 Aligned_cols=285 Identities=18% Similarity=0.222 Sum_probs=173.6
Q ss_pred EEEEecceecCCC-CCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHHH
Q 008146 167 VVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKK 245 (576)
Q Consensus 167 IaItGmg~~~P~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa~e 245 (576)
|-|+|+|...|.- .+.+++-+.+......|.. ..+... ..+..+ -.....|+.+|+.+
T Consensus 3 v~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~-----~~Gi~~-----------R~~~~~-----~~~~~~la~~Aa~~ 61 (347)
T PRK04262 3 VGIVGYGAYIPRYRIKVEEIARVWGDDPEAIKR-----GLGVEE-----------KSVPGP-----DEDTATIAVEAARN 61 (347)
T ss_pred eeEEEEEEeCCCEEecHHHHHHHhCcCHHHHhh-----ccCeee-----------eecCCC-----CcCHHHHHHHHHHH
Confidence 7799999999998 6777766543111000000 000000 000111 12346899999999
Q ss_pred HHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCCCC--ccccc
Q 008146 246 ALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG--PNYSI 323 (576)
Q Consensus 246 AL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G--p~~tv 323 (576)
||+++|+++++|+ .+++++..+.+ .....+.+++..+|+.. +.+.+
T Consensus 62 aL~~ag~~~~dId-------~li~~s~~~~~-------------------------~~p~~a~~v~~~Lgl~~~~~~~dv 109 (347)
T PRK04262 62 ALKRAGIDPKEIG-------AVYVGSESHPY-------------------------AVKPTATIVAEALGATPDLTAADL 109 (347)
T ss_pred HHHHcCCCHHHCC-------EEEEEecCCCc-------------------------ccccHHHHHHHHcCCCCCceEEEH
Confidence 9999999998666 57776643211 11223567888899964 67889
Q ss_pred cCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceEEEE
Q 008146 324 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 403 (576)
Q Consensus 324 ~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAaalv 403 (576)
+.+|++++.+|+.|..+|++|.++.+||.+.|.... +|... + -+..||||+|+|
T Consensus 110 ~~~C~~~~~aL~~A~~~i~sg~~~~aLVv~~e~~~~------------------~~~~~---~-----~~~~GDGA~A~l 163 (347)
T PRK04262 110 EFACKAGTAALQAAMGLVKSGMIKYALAIGADTAQG------------------APGDA---L-----EYTAAAGGAAFI 163 (347)
T ss_pred HHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeecc------------------CCCCC---C-----CCcCCCCcEEEE
Confidence 999999999999999999999999999999997210 01111 1 123599999999
Q ss_pred EcchHHHHhcCCeeeEEEEEEE-EecCCCCC-C---C--C------C--C-ChHHHHHHHHHHHHHcCCCCCCccEEEec
Q 008146 404 LEELEHAKKRGAKIYAEFRGGS-FTSDAYHM-T---E--P------H--P-DGVGVILCIEKALAHSGVSREDVNYINAH 467 (576)
Q Consensus 404 L~~~~~A~~~g~~i~a~I~g~~-~~~dg~~~-~---~--~------~--p-~~~~~~~ai~~AL~~Agl~~~dId~ve~H 467 (576)
|++.+. ..+|.+.. ...|.... . . + . + .......+++++|+++|++++||+++..|
T Consensus 164 l~~~~~--------~~~i~~~~~~~~d~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~dId~~v~H 235 (347)
T PRK04262 164 IGKEEV--------IAEIEATYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFKHIISAAKGLMEKLGLKPSDYDYAVFH 235 (347)
T ss_pred EecCcc--------cceeeccccccccchhhcCCCCCcCCCcCceecchHHHHHHHHHHHHHHHHHhCcCHHHhceeecC
Confidence 986321 12233321 11222110 0 0 0 0 0 01345688999999999999999999999
Q ss_pred CCCCccCcHHHHHHHHHHHcCC-CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCC
Q 008146 468 ATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGP 546 (576)
Q Consensus 468 gtgt~~gD~~E~~Al~~~f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~ 546 (576)
-.+..+.+ .+.+.++-. .++..+-+-..+||+.+|+=.+.|..++ +. + .
T Consensus 236 q~n~~~~~-----~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~---~~--~-------~------------- 285 (347)
T PRK04262 236 QPNGKFPL-----RVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVL---DV--A-------K------------- 285 (347)
T ss_pred CCchHHHH-----HHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHH---Hh--C-------C-------------
Confidence 66555333 233344432 1222211236789999888666665432 11 1 0
Q ss_pred cccccCccEEEEeccCCCcceeEEEEe
Q 008146 547 KKERLEVKAALSNSFGFGGHNSSIIFS 573 (576)
Q Consensus 547 ~~~~~~~~~alv~sfG~gG~na~vil~ 573 (576)
+...++..+||.|-+...++++
T Consensus 286 -----~Gd~vll~~~G~G~~~~~~~~~ 307 (347)
T PRK04262 286 -----PGDRILVVSFGSGAGSDAFSIT 307 (347)
T ss_pred -----CCCEEEEEecCCCcceeeEEEE
Confidence 1234666788888776666654
|
|
| >PLN03172 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=7e-12 Score=133.29 Aligned_cols=331 Identities=12% Similarity=0.101 Sum_probs=188.6
Q ss_pred CcEEEEecceecCCC-CCHHHHHHHHH---cC--CCccee-cc-CCCCCCCCcccccc----ccCCC-CCCC----CChh
Q 008146 165 KRVVVTGMGLVSPLG-HEPDVFYNNLL---EG--VSGISE-IE-TFDCTSFPTKIAAE----IKSFS-TDGW----VAPK 227 (576)
Q Consensus 165 ~~IaItGmg~~~P~g-~~~~~~w~~L~---~G--~~~i~~-~~-~~~~~~~~~~~~g~----v~~fd-~~~~----i~~~ 227 (576)
-+..|.|+|..+|.- ...+++.+.+. +. ...+.. +. -|+..+...+.... ++.+. .... +..+
T Consensus 15 ~~~~I~~igta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r 94 (393)
T PLN03172 15 GPATILAIGKATPANCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLDAR 94 (393)
T ss_pred CCeEEEEEEecCCCccccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccccCCCCHHHH
Confidence 347899999999987 56666655544 21 111111 10 02222222222111 11110 0000 2333
Q ss_pred hhhcCCHHHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhH
Q 008146 228 LSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGS 307 (576)
Q Consensus 228 ~a~~mdp~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a 307 (576)
....+.-...|+.+|+.+||+++|+++++|+ -+++.++.+. ..+..+
T Consensus 95 ~~~~~~~a~~La~~Aa~~aL~~ag~~~~dId-------~ii~~t~t~~--------------------------~~P~~a 141 (393)
T PLN03172 95 QDMVVVEVPKLGKEAAAKAIKEWGQPKSKIT-------HLVFCTTSGV--------------------------DMPGAD 141 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEccCCC--------------------------cCchHH
Confidence 3344445668999999999999999998666 4666665320 123467
Q ss_pred HHHHHHhCCCCc---cccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCC
Q 008146 308 AMLAMDLGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASR 384 (576)
Q Consensus 308 ~~ia~~lgl~Gp---~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~r 384 (576)
.+++..||++.- .+.+..+|++++.+|..|.+++++|....+||+++|.+.... .. +++ +
T Consensus 142 ~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~~----------~~-----~~d--~ 204 (393)
T PLN03172 142 YQLTKLLGLKPSVKRFMMYQQGCFAGGTVLRLAKDLAENNAGSRVLVVCSEITAVTF----------RG-----PSD--T 204 (393)
T ss_pred HHHHHHhCCCCCceEEeeeCCchHHHHHHHHHHHHHHHcCCCCeEEEEEEehhhhhh----------cc-----ccc--c
Confidence 889999999763 356789999999999999999999999999999999843100 00 000 0
Q ss_pred CCccCCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEE----ecCCC----------C--CCCCCC--ChHHHHHH
Q 008146 385 PWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSF----TSDAY----------H--MTEPHP--DGVGVILC 446 (576)
Q Consensus 385 pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~----~~dg~----------~--~~~~~p--~~~~~~~a 446 (576)
-.+.--...++||||+|+||+..+... . .++.-+|.++.. .+++. + +....| -...+...
T Consensus 205 ~~~~~v~~~LFGDGAaAvVl~~~~~~~-~-~~~~~~i~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~ 282 (393)
T PLN03172 205 HLDSLVGQALFGDGAAAVIIGADPDTK-I-ERPLFEIVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKS 282 (393)
T ss_pred cHHhhhccchhcCceEEEEEecCCCCc-c-cCceeEEeeeccEEecCCcccccceEEcCCcEEEEechHHHHHHHHHHHH
Confidence 000001346789999999998743211 0 112123443321 11111 0 011111 12345578
Q ss_pred HHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCCCcccc--cccccccccccchhHHHHHHHHHH-HHcC
Q 008146 447 IEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVN--STKSMIGHLLGAAGAVEAIAVVQA-IRTG 523 (576)
Q Consensus 447 i~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~~~~v~--s~K~~iGH~~gAsG~~~li~~~l~-L~~g 523 (576)
+++.|++.|++..||++|-.|--|-. -++++.+.++-.+.-... .+-..+|++.+|+=..-|-+.... ++.|
T Consensus 283 ~~~~L~~~gl~~~di~~~~~Hqgg~~-----Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g 357 (393)
T PLN03172 283 LVEAFAPIGINDWNSIFWIAHPGGPA-----ILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEG 357 (393)
T ss_pred HHHHhhhcCCCccccceEEecCCcHH-----HHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHHHhhhhhcC
Confidence 88999999999999999999966654 455566666533211111 233456888776643333322110 1111
Q ss_pred CCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 524 WIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 524 ~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
.+ ........++..+||-|=+-..++|+.
T Consensus 358 ~~----------------------~~G~~~~~~ll~afGpG~t~~~~ll~~ 386 (393)
T PLN03172 358 KG----------------------STGEGLEWGVLFGFGPGLTVETVVLHS 386 (393)
T ss_pred CC----------------------CCCCCcceEEEEEeCCcceeeeeeeEe
Confidence 11 000112456778999998888888875
|
|
| >cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs | Back alignment and domain information |
|---|
Probab=99.45 E-value=5.9e-12 Score=133.18 Aligned_cols=317 Identities=14% Similarity=0.159 Sum_probs=185.1
Q ss_pred EEEEecceecCCC-CCHHHHHHHHHcCCCc---------ceeccCCCCCCCCcccc-cc--ccCCCCC----CCCChhhh
Q 008146 167 VVVTGMGLVSPLG-HEPDVFYNNLLEGVSG---------ISEIETFDCTSFPTKIA-AE--IKSFSTD----GWVAPKLS 229 (576)
Q Consensus 167 IaItGmg~~~P~g-~~~~~~w~~L~~G~~~---------i~~~~~~~~~~~~~~~~-g~--v~~fd~~----~~i~~~~a 229 (576)
+.|+|+|...|.- .+.+++++.+...... +..+ ++..+...+.. .. .+.+.+. .-+..+..
T Consensus 2 ~~I~~~~~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~gI~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (361)
T cd00831 2 ATILAIGTAVPPHRVPQSELVDFYRRLFSSDHLPELKEKLKRL--CAKTGIETRYLVLPGGEETYAPRPEMSPSLDERND 79 (361)
T ss_pred cEEEEEEEeCCCCcCCHHHhhHHHHhcCChhhhHHHHHHHHHH--HhhcceeEEEEEecCchhhcCCccccCCCcCcchh
Confidence 5799999999998 6777787776543211 0000 00001111100 00 0000000 00222223
Q ss_pred hcCCHHHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHH
Q 008146 230 KRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAM 309 (576)
Q Consensus 230 ~~mdp~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ 309 (576)
........|+.+|+++||+++|+++++|+ .|+++++.+ ...+..+.+
T Consensus 80 ~~~~~~~~la~~Aa~~aL~~a~~~~~~Id-------~li~~s~~~--------------------------~~~P~~a~~ 126 (361)
T cd00831 80 IALEEARELAEEAARGALDEAGLRPSDID-------HLVVNTSTG--------------------------NPTPSLDAM 126 (361)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCHHHCC-------EEEEECCCC--------------------------CCCCCHHHH
Confidence 33345678999999999999999998666 566665431 123445778
Q ss_pred HHHHhCCCC--cccccc-CCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCC
Q 008146 310 LAMDLGWMG--PNYSIS-TACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPW 386 (576)
Q Consensus 310 ia~~lgl~G--p~~tv~-taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpf 386 (576)
|...+|++. +++.|. .+|++++.||+.|..+|++|..+.+||+++|.+.... . ++. ..
T Consensus 127 i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~~~~~~~~~~~aLvv~~e~~s~~~-----------~-----~~d---~~ 187 (361)
T cd00831 127 LINRLGLRPDVKRYNLGGMGCSAGAIALDLAKDLLEANPGARVLVVSTELCSLWY-----------R-----GPD---HR 187 (361)
T ss_pred HHHHhCCCcccchhccccccchhHHHHHHHHHHHHHHCCCCEEEEEEeeccccee-----------C-----CCC---cH
Confidence 999999963 678898 8999999999999999999999999999999743210 0 000 00
Q ss_pred ccCCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEe--------------cCCCCCCC-C-CCC--hHHHHHHHH
Q 008146 387 DINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFT--------------SDAYHMTE-P-HPD--GVGVILCIE 448 (576)
Q Consensus 387 d~~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~--------------~dg~~~~~-~-~p~--~~~~~~ai~ 448 (576)
+..-..+++|||++|+||++.+.... .......+.+.... ..+.+... + .+. .....++++
T Consensus 188 ~~~~~~~lfGDgaaA~ll~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~ 266 (361)
T cd00831 188 SMLVGNALFGDGAAAVLLSNDPRDRR-RERPLFELVRAASTLLPDSEDAMGWHLGEEGLTFVLSRDVPRLVEKNLERVLR 266 (361)
T ss_pred HHhhhhhhccCCceEEEEEcCCCccc-ccccceeeecccceeeecCCCceEEEEEcceEEEEeChhHHHHHHHHHHHHHH
Confidence 00003577899999999997553210 00111222221110 00110000 0 001 224567899
Q ss_pred HHHHHc--CCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCC-Cccc-ccccccccccccchhHHHHHHHHHHHHcCC
Q 008146 449 KALAHS--GVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRV-NSTKSMIGHLLGAAGAVEAIAVVQAIRTGW 524 (576)
Q Consensus 449 ~AL~~A--gl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~-~~~v-~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ 524 (576)
++|+++ |++++||+++..|-.+..+- +.+.+.++-.. ++.. ..+-..+||+.+|+=.+.|..+ ++++.
T Consensus 267 ~~L~~~~~g~~~~did~~~~H~~~~~i~-----~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~~~---~~~g~ 338 (361)
T cd00831 267 KLLARLGIGLFKLAFDHWCVHPGGRAVL-----DAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYM---EAKGR 338 (361)
T ss_pred HHhccccCCCccccceEEEECCCChHHH-----HHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHHHH---HHhCC
Confidence 999999 99999999999997766533 34555555321 1111 1233467999888765555443 34433
Q ss_pred CCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEE
Q 008146 525 IHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSII 571 (576)
Q Consensus 525 ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vi 571 (576)
+. +-+..+..+||.|-+-..++
T Consensus 339 ~~-------------------------~Gd~vll~~~G~G~s~~~~l 360 (361)
T cd00831 339 VK-------------------------RGDRGLLIAFGPGFTCESAV 360 (361)
T ss_pred CC-------------------------CCCEEEEEEEcCCceeeeee
Confidence 20 12456667888887666655
|
PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. |
| >PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.44 E-value=6.1e-12 Score=132.34 Aligned_cols=240 Identities=15% Similarity=0.119 Sum_probs=152.8
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
...|+.+|+++||+++|+++++|+ .+++++.. +....+..+.+++..|
T Consensus 60 ~~~la~~Aa~~aL~~a~~~~~dId-------~lI~~t~t-------------------------~d~~~P~~a~~v~~~L 107 (353)
T PRK12880 60 VSDLGKHAANTLLQGLNIDKNSLD-------ALIVVTQS-------------------------PDFFMPSTACYLHQLL 107 (353)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEcCC-------------------------CCCCCCcHHHHHHHHh
Confidence 578999999999999999998766 56677654 2334556788999999
Q ss_pred CCCC--ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCc
Q 008146 315 GWMG--PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDG 392 (576)
Q Consensus 315 gl~G--p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G 392 (576)
|++. +++.|..+|++++.+|..|..+|++|..+ +||+++|..... +. + ++....
T Consensus 108 g~~~~~~~~di~~~C~g~~~aL~~A~~~i~~~~~~-~LVv~~e~~S~~-----------~~-----~-------~d~~~~ 163 (353)
T PRK12880 108 NLSSKTIAFDLGQACAGYLYGLFVAHSLIQSGLGK-ILLICGDTLSKF-----------IH-----P-------KNMNLA 163 (353)
T ss_pred CCCCCceEEehhhhhHHHHHHHHHHHHHHHcCCCC-EEEEEehhhhcc-----------CC-----c-------ccCCce
Confidence 9963 78899999999999999999999999999 888888862111 10 1 111234
Q ss_pred ceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecC------CCC--CCC------C-------------CCChH----
Q 008146 393 FVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSD------AYH--MTE------P-------------HPDGV---- 441 (576)
Q Consensus 393 ~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~d------g~~--~~~------~-------------~p~~~---- 441 (576)
.++||||+|+||++.+.. .+ + ..+...+...+ +.+ ... . ..++.
T Consensus 164 ~lFGDGAaA~vl~~~~~~--~~--~-~~~~~~~~~~~~~~~p~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~ 238 (353)
T PRK12880 164 PIFGDGVSATLIEKTDFN--EA--F-FELGSDGKYFDKLIIPKGAMRIPKADIFNDDSLMQTEEFRQLENLYMDGANIFN 238 (353)
T ss_pred eeecccceEEEEEecCCC--Cc--e-EEEEecCCCCCeEEecCCCcCCCccccccccccccccccccCceEEEcCHHHHH
Confidence 678999999999864321 11 1 11111110000 000 000 0 01111
Q ss_pred ----HHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCC-CcccccccccccccccchhHHHHHHH
Q 008146 442 ----GVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAIAV 516 (576)
Q Consensus 442 ----~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~-~~~v~s~K~~iGH~~gAsG~~~li~~ 516 (576)
....+++++|+++|++++|||++..|-.+- .-.+.+.+.++-.. +++ ..+-..+||+.+|+=...|-..
T Consensus 239 ~~~~~~~~~i~~~L~~~gl~~~did~~v~HQ~~~-----~i~~~i~~~Lgl~~ek~~-~~~l~~~GNtssasip~~L~~~ 312 (353)
T PRK12880 239 MALECEPKSFKEILEFSKVDEKDIAFHLFHQSNA-----YLVDCIKEELKLNDDKVP-NFIMEKYANLSACSLPALLCEL 312 (353)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCH-----HHHHHHHHHhCCCHHHhh-hhhHHhhCCHHHHHHHHHHHHH
Confidence 123688999999999999999999995554 34556666665432 221 1222346887766543333222
Q ss_pred HHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEe
Q 008146 517 VQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573 (576)
Q Consensus 517 ~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~ 573 (576)
++.+. .+ .+..+||.|=+-+.++++
T Consensus 313 ---~~~~~----------------------------~~-~ll~~~G~G~s~g~~ll~ 337 (353)
T PRK12880 313 ---DTPKE----------------------------FK-ASLSAFGAGLSWGSAVLN 337 (353)
T ss_pred ---HHcCC----------------------------cE-EEEEEEchhhhheEeEEE
Confidence 22111 11 466788888888888776
|
|
| >KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.41 E-value=3.5e-13 Score=130.60 Aligned_cols=273 Identities=21% Similarity=0.276 Sum_probs=181.1
Q ss_pred HHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCC
Q 008146 237 LYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGW 316 (576)
Q Consensus 237 rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 316 (576)
.|..++....|+...++.+.+| -++.|+..... -++.++...+..-|+
T Consensus 68 dlar~al~~ll~kt~lpke~~d-------yii~gtviqev-------------------------ktsniareaal~agf 115 (465)
T KOG1392|consen 68 DLAREALKALLEKTKLPKEQLD-------YIICGTVIQEV-------------------------KTSNIAREAALLAGF 115 (465)
T ss_pred HHHHHHHHHHHHhccCCHHHhc-------eeeehhhHHHH-------------------------hcchHHHHHHHhcCC
Confidence 4555666777888888877555 46677643111 133456666666777
Q ss_pred --CCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhH------------------------------
Q 008146 317 --MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLG------------------------------ 364 (576)
Q Consensus 317 --~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~------------------------------ 364 (576)
+-|..||..+|-|+.+|+..++-+|..|.||++++||||.+.+.+.-.
T Consensus 116 sdktpahtvtmacissn~amttgmgliatg~~dvivaggvelmsdvpirhsrkmrklml~~nkak~~gqrl~l~s~fr~n 195 (465)
T KOG1392|consen 116 SDKTPAHTVTMACISSNVAMTTGMGLIATGNADVIVAGGVELMSDVPIRHSRKMRKLMLGMNKAKDVGQRLKLGSQFRKN 195 (465)
T ss_pred CCCCccceeeeehhccchhhhccceeEeeCCcCEEEEcceeecccCchhhhHHHHHHhhccccccchhhhhhHHhhhhhh
Confidence 459999999999999999999999999999999999999875422100
Q ss_pred ------------------HHHHhhhhhccC------------------------------------CCC----CC-----
Q 008146 365 ------------------GFVACRALSQRN------------------------------------NDP----TK----- 381 (576)
Q Consensus 365 ------------------~~~~~~~ls~~~------------------------------------~~p----~~----- 381 (576)
+++..+..+..+ -+| +.
T Consensus 196 flapelpavaefstgetmghsadrlaaafnvsr~eqdeyalrshtlakeaq~~g~ftdvvpfkv~gkd~~t~kdngirvs 275 (465)
T KOG1392|consen 196 FLAPELPAVAEFSTGETMGHSADRLAAAFNVSRREQDEYALRSHTLAKEAQKNGKFTDVVPFKVDGKDPKTIKDNGIRVS 275 (465)
T ss_pred ccCcCcchheeccccccccccHHHHHHHhccchhhhhHHHHhhhHHHHHHHhcCcccceeeEecCCCCcceecCCCcccC
Confidence 000000000000 000 00
Q ss_pred -----------CCCCCcc--CCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEE-EecCCCCCCCCCCChHHHHHHH
Q 008146 382 -----------ASRPWDI--NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGS-FTSDAYHMTEPHPDGVGVILCI 447 (576)
Q Consensus 382 -----------~~rpfd~--~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~-~~~dg~~~~~~~p~~~~~~~ai 447 (576)
..+||.. .++...+.||+.+.++..+|.|++.|.++.+.++.+- +++|........| ..+|
T Consensus 276 sle~laklkpafvkpygtvtaanasfltdgasa~limteekala~gykpkaylrdflyvsqdpkdqlllgp-----ay~i 350 (465)
T KOG1392|consen 276 SLEKLAKLKPAFVKPYGTVTAANASFLTDGASAALIMTEEKALANGYKPKAYLRDFLYVSQDPKDQLLLGP-----AYVI 350 (465)
T ss_pred CHHHHhhcCchhccCcceeEecccchhcCcchhhhhhhHHHHHHcCCCchHHhhhheeeccCchhheeccc-----cccc
Confidence 0012211 1333446799999999999999999999999999875 4666654433333 5789
Q ss_pred HHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHH-HH-----cCC--------CCcccccccccccccccchhHHHH
Q 008146 448 EKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIH-CF-----GQN--------RGLRVNSTKSMIGHLLGAAGAVEA 513 (576)
Q Consensus 448 ~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~-~f-----~~~--------~~~~v~s~K~~iGH~~gAsG~~~l 513 (576)
.+.|++||++..|||.+|.|-...-. -.....++.. .| +.. .+++.+...-.|||+.||+|+.-.
T Consensus 351 pkll~kagltlkdid~feiheafagq-ilanlkamdsdwfck~ymgr~~kvg~ppl~k~nnwggslsighpfgatgvrl~ 429 (465)
T KOG1392|consen 351 PKLLDKAGLTLKDIDVFEIHEAFAGQ-ILANLKAMDSDWFCKEYMGRSGKVGRPPLDKLNNWGGSLSIGHPFGATGVRLA 429 (465)
T ss_pred HHHHHHcCCcccccchhhhHHHHhHH-HHhhhhhhcchHHHHHHhcccCccCCCChHHhcccCcceecCCcccccchhhH
Confidence 99999999999999999999643310 0011223321 12 211 124567777789999999999877
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEeeC
Q 008146 514 IAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 514 i~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~~ 575 (576)
....--|+. ..-+++++-....||+...+++|.|
T Consensus 430 mh~anrl~~----------------------------e~gqygvvaacaaggqgvamlieay 463 (465)
T KOG1392|consen 430 MHSANRLKE----------------------------EKGQYGVVAACAAGGQGVAMLIEAY 463 (465)
T ss_pred HHHHhHHHh----------------------------hcCceeEeehhhcCCcceEEEeecc
Confidence 666655543 1246777888899999999999998
|
|
| >COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.39 E-value=9.5e-13 Score=140.03 Aligned_cols=58 Identities=29% Similarity=0.390 Sum_probs=51.9
Q ss_pred chhHHHHHHHhCCCC--ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchh
Q 008146 304 NMGSAMLAMDLGWMG--PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPI 361 (576)
Q Consensus 304 ~~~a~~ia~~lgl~G--p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~ 361 (576)
...+..++...|+.. |.++|+.+|+||+.|++.|+++|++|++|++|+||+|.|....
T Consensus 67 ~~~ar~~a~~aGl~~~~p~~~V~~~c~SG~~Av~~A~~~I~sG~~dvvlagG~E~mS~~~ 126 (392)
T COG0183 67 QNIARQAALAAGLPGSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEKMSDAP 126 (392)
T ss_pred ccHHHHHHHHcCCCCCCCceEEeccchhHHHHHHHHHHHHHCCCCCEEEEEeeeeccCCC
Confidence 345778888999975 9999999999999999999999999999999999999876543
|
|
| >PLN03170 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.3e-11 Score=129.82 Aligned_cols=331 Identities=11% Similarity=0.111 Sum_probs=188.5
Q ss_pred CcEEEEecceecCCC-CCHHHHHHHHHcCC-----Cccee-cc-CCCCCCCCccccccc---cCCCCCCC------CChh
Q 008146 165 KRVVVTGMGLVSPLG-HEPDVFYNNLLEGV-----SGISE-IE-TFDCTSFPTKIAAEI---KSFSTDGW------VAPK 227 (576)
Q Consensus 165 ~~IaItGmg~~~P~g-~~~~~~w~~L~~G~-----~~i~~-~~-~~~~~~~~~~~~g~v---~~fd~~~~------i~~~ 227 (576)
-+..|.|+|..+|.- ...+++++.+.+-- ...+. +. -|+..+...+..... ...++..+ +..+
T Consensus 19 ~~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r 98 (401)
T PLN03170 19 GPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLDAR 98 (401)
T ss_pred CCeEEEEEeecCCCccccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCCCHHHH
Confidence 347799999999988 56666666655421 11111 10 122222222221110 00011111 2233
Q ss_pred hhhcCCHHHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhH
Q 008146 228 LSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGS 307 (576)
Q Consensus 228 ~a~~mdp~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a 307 (576)
.....+-.-.|+.+|+++||+++|+++++|+ .+++.++.+ ...+..+
T Consensus 99 ~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId-------~lI~~T~Tg--------------------------~~~Ps~a 145 (401)
T PLN03170 99 QDIVVVEVPKLGKAAAQKAIKEWGQPKSKIT-------HLVFCTTSG--------------------------VDMPGAD 145 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEccCC--------------------------CCCChHH
Confidence 3333444557999999999999999998666 456665431 1134468
Q ss_pred HHHHHHhCCCCc---cccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCC
Q 008146 308 AMLAMDLGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASR 384 (576)
Q Consensus 308 ~~ia~~lgl~Gp---~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~r 384 (576)
.+++..||++.- .+.+..+|++++.+|..|.+.+++|....|||+++|.+..-. . +|+. .+
T Consensus 146 ~~l~~~LGl~~~~~r~~d~~~gC~G~~~aL~~A~~l~~~~~~~~vLVV~~E~~S~~~-----------~----~~~~-~~ 209 (401)
T PLN03170 146 YQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITAVTF-----------R----GPSE-SH 209 (401)
T ss_pred HHHHHHhCcCcccHHHHhhcChhHHHHHHHHHHHHHHHcCCCCeEEEEEEehhhhcc-----------C----Cccc-ch
Confidence 899999999753 688999999999999999999999999999999999843110 0 0110 00
Q ss_pred CCccCCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEE--------------ecCCCC--CCCCCC--ChHHHHHH
Q 008146 385 PWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSF--------------TSDAYH--MTEPHP--DGVGVILC 446 (576)
Q Consensus 385 pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~--------------~~dg~~--~~~~~p--~~~~~~~a 446 (576)
++..-...++||||+|+||+..+... ...+..++..... ..+|.. +....| -...+...
T Consensus 210 -~~~~~~~~LFGDGAaAvVl~~~~~~~--~~~~~~~l~~~~~~~~p~~~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~ 286 (401)
T PLN03170 210 -LDSMVGQALFGDGAAAVIVGADPDER--VERPLFQLVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERS 286 (401)
T ss_pred -hhhhhhhhhhhceeEEEEEecCCccc--ccCCceEEeeccceEecCCcccccceEEcCCeEEEEehHHHHHHHHHHHHH
Confidence 11112345789999999998643210 0111112332211 101110 000001 12345568
Q ss_pred HHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCCC-c-ccccccccccccccchhHHHHHHHHHH-HHcC
Q 008146 447 IEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRG-L-RVNSTKSMIGHLLGAAGAVEAIAVVQA-IRTG 523 (576)
Q Consensus 447 i~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~~-~-~v~s~K~~iGH~~gAsG~~~li~~~l~-L~~g 523 (576)
++++|+++|++.+||+++-.|--|.. -++++.+.++-... + ....+-..+||+.+|+=...|-+.... ++.|
T Consensus 287 v~~~L~~~gl~~~di~~~v~Hqgg~~-----il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g 361 (401)
T PLN03170 287 LEEAFKPLGITDYNSIFWVAHPGGPA-----ILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDG 361 (401)
T ss_pred HHHHHHhcCCCccccCeEEecCCcHH-----HHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHHHHhHhhcC
Confidence 89999999999999999999966554 34555666553311 1 111233467998877655444443211 1222
Q ss_pred CCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 524 WIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 524 ~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
.+.+. ...+..+..+||-|=+-..++|+.
T Consensus 362 ~~~~G----------------------~~~~~~ll~afGpG~t~~~~ll~~ 390 (401)
T PLN03170 362 QATTG----------------------EGFDWGVLFGFGPGLTVETVVLHS 390 (401)
T ss_pred CCCCC----------------------CCccEEEEEEeCchHhHHhHHhee
Confidence 22110 012456677888877777676664
|
|
| >PLN03169 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=4.8e-11 Score=127.16 Aligned_cols=222 Identities=13% Similarity=0.088 Sum_probs=137.6
Q ss_pred HHHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHH
Q 008146 234 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 313 (576)
Q Consensus 234 p~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~ 313 (576)
....|+.+|+.+||+++|+++++|+ .|+++++. ....+..+..++..
T Consensus 105 ~~~~La~~Aa~~aL~~ag~~~~dId-------~lI~~t~t--------------------------~~~~P~~a~~l~~~ 151 (391)
T PLN03169 105 AVTQMAVEASLACIKEWGRPVSDIT-------HLVYVSSS--------------------------EARLPGGDLYLAKQ 151 (391)
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHCC-------EEEEECcC--------------------------CCCCCcHHHHHHHH
Confidence 3467999999999999999998666 46666542 11234457789999
Q ss_pred hCCCC---ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCC
Q 008146 314 LGWMG---PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINR 390 (576)
Q Consensus 314 lgl~G---p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~ 390 (576)
||+.. ..+.+..+|++++.||..|.++|++|..+.|||+++|....-. .. +. ..+ +++..
T Consensus 152 LGl~~~~~~~~d~~~gC~g~~~aL~~A~~~~~~~~~~~vLvv~~e~~s~~~-----------~~----~~-~~~-~~d~~ 214 (391)
T PLN03169 152 LGLSPDVQRVMLYFLGCSGGVAGLRVAKDIAENNPGSRVLLTTSETTILGF-----------RP----PS-PDR-PYDLV 214 (391)
T ss_pred hCcCCcceeeecccChhHHHHHHHHHHHHHHHhCCCCeEEEEEEEcChhhc-----------cC----CC-ccc-hhhhh
Confidence 99964 2578899999999999999999999999999999999732100 00 00 001 12223
Q ss_pred CcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEE--ecCCC-CC-------------CCCCC--ChHHHHHHHHHHHH
Q 008146 391 DGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSF--TSDAY-HM-------------TEPHP--DGVGVILCIEKALA 452 (576)
Q Consensus 391 ~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~--~~dg~-~~-------------~~~~p--~~~~~~~ai~~AL~ 452 (576)
...++||||+|+||+..+... ....++ .+...+. .-+.. .+ ....| -...+..+++++|+
T Consensus 215 ~~~lFGDGAaA~vl~~~~~~~-~~~~~~-~l~~~~~~~ip~~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~~L~ 292 (391)
T PLN03169 215 GAALFGDGAAAVIIGADPIPV-SESPFF-ELHTAIQQFLPGTEKTIDGRLTEEGINFKLGRELPQKIEDNIEGFCKKLMK 292 (391)
T ss_pred hhhhccCceEEEEEecCCCcc-cCCcce-EEEeeeeeEcCCCccccCceecCCceEEEECcHHHHHHHHHHHHHHHHHHH
Confidence 456799999999998644321 011121 2221111 00000 00 00001 12334567899999
Q ss_pred HcCCCCCCcc--EEEecCCCCccCcHHHHHHHHHHHcCCC-Cccc-ccccccccccccchhHHH
Q 008146 453 HSGVSREDVN--YINAHATSTPAGDIKEYQALIHCFGQNR-GLRV-NSTKSMIGHLLGAAGAVE 512 (576)
Q Consensus 453 ~Agl~~~dId--~ve~Hgtgt~~gD~~E~~Al~~~f~~~~-~~~v-~s~K~~iGH~~gAsG~~~ 512 (576)
++|++++||| ++..|-.+.. -++++.+.++-.. .+.. ..+-..+||+.+|+=.+.
T Consensus 293 ~~gl~~~did~~~~v~Hq~n~~-----il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~ 351 (391)
T PLN03169 293 KAGLVEKDYNDLFWAVHPGGPA-----ILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYV 351 (391)
T ss_pred HcCCCCCCCCcceEEecCCCHH-----HHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHH
Confidence 9999999999 8888966643 3445555555321 1111 122345799877764433
|
|
| >PLN03171 chalcone synthase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=1e-10 Score=124.85 Aligned_cols=225 Identities=15% Similarity=0.096 Sum_probs=135.4
Q ss_pred cCCHHHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHH
Q 008146 231 RMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAML 310 (576)
Q Consensus 231 ~mdp~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~i 310 (576)
..+....|+.+|+++||+++|+++++|+ -|+++++.+ .. .+..+..+
T Consensus 104 ~~~~a~~la~~Aa~~aL~~ag~~~~dId-------~li~~t~t~-------------------------~~-~P~~a~~v 150 (399)
T PLN03171 104 AADAVPELAAEAAKKAIAEWGRPAADIT-------HLVVTTNSG-------------------------AH-IPGVDFRL 150 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEcCCC-------------------------CC-CCchHHHH
Confidence 3345667999999999999999998776 566766532 11 23457789
Q ss_pred HHHhCCCCc---cccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCc
Q 008146 311 AMDLGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWD 387 (576)
Q Consensus 311 a~~lgl~Gp---~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd 387 (576)
...||++.- .+.+..+|++++.+|..|.++|++|..+.|||+++|.+..-. . +.... .++
T Consensus 151 ~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~li~~~~~~~vLVv~~e~~s~~~-----------~-----~~d~~-~~~ 213 (399)
T PLN03171 151 VPLLGLRPSVRRTMLHLNGCFAGAAALRLAKDLAENNRGARVLVVAAEITLLLF-----------N-----GPDEG-CFQ 213 (399)
T ss_pred HHHhCCCcccceeeccCCccHHHHHHHHHHHHHHHhCCCCeEEEEEEecccccc-----------C-----CCCcc-cHH
Confidence 999999742 456677999999999999999999999999999999832110 0 00000 011
Q ss_pred cCCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCC--------------CCCC-CCChHHHHHHHHHHHH
Q 008146 388 INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYH--------------MTEP-HPDGVGVILCIEKALA 452 (576)
Q Consensus 388 ~~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~--------------~~~~-~p~~~~~~~ai~~AL~ 452 (576)
..-.+.++||||+|+||++.+...++ .+..|.......++.. .... ..-.....+.++++++
T Consensus 214 ~~v~~~LFGDGAaA~vl~~~~~~~~~---~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~vp~~i~~~l~~~l~ 290 (399)
T PLN03171 214 TLLNQGLFGDGAAAVIVGADADAAER---PLFEIVSAAQAIIPESDDAINMHFTEGGLDGNIGTRQVPGLIGDNIERCLL 290 (399)
T ss_pred hhhccccccCccEEEEEecCCCCCCC---CceEEEEeeeEEecCCchheEEEEEcCCceEEECchhHHHHHHHHHHHHHH
Confidence 11236789999999999975422111 1223333222111110 0000 0011233344466655
Q ss_pred H---------cCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCC-Ccccc-cccccccccccchhHHHHH
Q 008146 453 H---------SGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVN-STKSMIGHLLGAAGAVEAI 514 (576)
Q Consensus 453 ~---------Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~-~~~v~-s~K~~iGH~~gAsG~~~li 514 (576)
+ +|++++||+++ .|-.+-. -++.+.+.++-.. +++.. .+-..+|++.+|+=.+.|-
T Consensus 291 ~~l~~~~~~~~g~~~~di~~~-~Hq~~~~-----il~~v~~~Lgl~~ek~~~s~~~l~~yGNtssaSip~~L~ 357 (399)
T PLN03171 291 DAFAPLLGGDGGAEWNDLFWA-VHPGSSA-----ILDQVDAALGLEPEKLAASRRVLSDYGNMFGATVIFALD 357 (399)
T ss_pred HHHHhhcccccCCCcccceEE-EcCCcHH-----HHHHHHHHcCCCHHHhHHHHHHHHHhCcchhhhHHHHHH
Confidence 4 58899999998 6855543 3445556655332 12110 2234579988766444443
|
|
| >PLN03173 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=6.7e-11 Score=125.71 Aligned_cols=294 Identities=11% Similarity=0.107 Sum_probs=168.9
Q ss_pred CcEEEEecceecCCC-CCHHHHHHHHHcCC-----Cccee-ccC-CCCCCCCcccccccc-CCCC-CCC-------CChh
Q 008146 165 KRVVVTGMGLVSPLG-HEPDVFYNNLLEGV-----SGISE-IET-FDCTSFPTKIAAEIK-SFST-DGW-------VAPK 227 (576)
Q Consensus 165 ~~IaItGmg~~~P~g-~~~~~~w~~L~~G~-----~~i~~-~~~-~~~~~~~~~~~g~v~-~fd~-~~~-------i~~~ 227 (576)
-+..|.|+|..+|.- ...+++.+.+.+-- ..... +.+ |+..+...+.....+ .++. ..+ +..+
T Consensus 15 ~~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r 94 (391)
T PLN03173 15 GPATIMAIGTSTPPNCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYMAPSLDAR 94 (391)
T ss_pred CCeEEEEEEccCCCcccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCcccccccCCCHHHH
Confidence 347799999999987 56666666554322 11111 111 222222222111100 0000 001 1222
Q ss_pred hhhcCCHHHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhH
Q 008146 228 LSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGS 307 (576)
Q Consensus 228 ~a~~mdp~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a 307 (576)
.....+-...|+.+|+.+||+++|+++++|+ -+++.++.+. ..+..+
T Consensus 95 ~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId-------~li~~t~t~~--------------------------~~P~~a 141 (391)
T PLN03173 95 QDMVVVEVPKLGKEAAAKAIKEWGQPKSKIT-------HLVFCTTSGV--------------------------DMPGAD 141 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEccCCC--------------------------cccHHH
Confidence 2333344558999999999999999998666 4666654310 123467
Q ss_pred HHHHHHhCCCCc---cccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCC
Q 008146 308 AMLAMDLGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASR 384 (576)
Q Consensus 308 ~~ia~~lgl~Gp---~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~r 384 (576)
.+++..||++.- .+.+..+|++++.+|..|.++++.+..+.|||+++|.+.... .. ++. +
T Consensus 142 ~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~~----------~~-----~~d--~ 204 (391)
T PLN03173 142 YQLTKLLGLRSSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTF----------RG-----PSD--T 204 (391)
T ss_pred HHHHHHhCCCccceeeehhcCccHHHHHHHHHHHHHHHhCCCCeEEEEEEehhhhhh----------CC-----ccc--c
Confidence 889999999763 467899999999999999999999999999999999743110 00 100 0
Q ss_pred CCccCCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEE--------------EecCCCC--CCCCCCC--hHHHHHH
Q 008146 385 PWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGS--------------FTSDAYH--MTEPHPD--GVGVILC 446 (576)
Q Consensus 385 pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~--------------~~~dg~~--~~~~~p~--~~~~~~a 446 (576)
-.+..-...++||||+|+||+..+.. ....+.+ +|.+.. +...|.+ +....|. ...+...
T Consensus 205 ~~~~~v~~~LFGDGAaAvvl~~~~~~-~~~~~~~-~l~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~~~~~ 282 (391)
T PLN03173 205 HLDSLVGQALFGDGAAAIIIGSDPVL-GVEKPLF-ELVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNVEKS 282 (391)
T ss_pred chhhhhhhhhhcCceEEEEEeCCCCC-CcCCcce-EEEeeeeEEecCCccceeeEEEcCceEEEEecHHHHHHHHHHHHH
Confidence 00111234678999999999864321 0011112 232221 1111111 1111111 2345678
Q ss_pred HHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCCC-cc-cccccccccccccchhHHHHHH
Q 008146 447 IEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRG-LR-VNSTKSMIGHLLGAAGAVEAIA 515 (576)
Q Consensus 447 i~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~~-~~-v~s~K~~iGH~~gAsG~~~li~ 515 (576)
+++.|+++|++++||+++..|--|.. -++++.+.++-.++ +. ...+-..+|++.+|+=..-|-+
T Consensus 283 i~~~L~~~gl~~~di~~~v~Hqgg~~-----Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~ 348 (391)
T PLN03173 283 LTEAFKPLGISDWNSLFWIAHPGGPA-----ILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDE 348 (391)
T ss_pred HHHHHHhcCCCccccCeEEECCCcHH-----HHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHH
Confidence 89999999999999999999966654 35566666653321 11 1123445688877764443333
|
|
| >TIGR02845 spore_V_AD stage V sporulation protein AD | Back alignment and domain information |
|---|
Probab=99.30 E-value=3.4e-11 Score=121.66 Aligned_cols=179 Identities=21% Similarity=0.157 Sum_probs=125.1
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
...|+.+|+++||++||+++++|+ .+|+|+.. + ....+..++..|
T Consensus 50 e~eLa~eAa~~ALekAGL~~~DID-------~IIvGdl~--------------------------~--Q~~~As~vA~~L 94 (327)
T TIGR02845 50 ERKLMEDAVNLALKKANLKKDDVD-------FFLAGDLL--------------------------N--QIITANFVARDL 94 (327)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEeCCC--------------------------C--cccHHHHHHHHh
Confidence 367999999999999999998776 57776421 0 112467788888
Q ss_pred CCCCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcce
Q 008146 315 GWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFV 394 (576)
Q Consensus 315 gl~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v 394 (576)
|+ |.+.|+++|+|+..||..|+.+|++|.+|.+||++.+...+..... +... ..+. .+......
T Consensus 95 GI--P~fdV~~ACSTf~~AL~lAa~lI~SG~ad~VLVV~Ssh~S~AErqf-----r~p~-----eyg~----q~~~ta~~ 158 (327)
T TIGR02845 95 GI--PFLGLYGACSTSMETLALGAMLVDGGFADRVLAATSSHYATAERQF-----RYPT-----EYGV----QKPPTAQW 158 (327)
T ss_pred CC--CEEEEeccCHHHHHHHHHHHHHHhCCCCCEEEEEEecccchhhhhc-----cccc-----cccc----CCCCeeeE
Confidence 86 8899999999999999999999999999999999999854332111 0000 0011 22345677
Q ss_pred ecCceEEEEEcchHHHHhcCCeee----EEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q 008146 395 MGEGAGVLLLEELEHAKKRGAKIY----AEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATS 470 (576)
Q Consensus 395 ~gEGAaalvL~~~~~A~~~g~~i~----a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtg 470 (576)
.++||||+||++.+ .+.+|. ++|..+++. |...+.. ...++....|.+-+++.|.+|+|-|.|..-+.|
T Consensus 159 tgdGAGA~vl~~~~----~~~~i~~~t~gkv~d~g~~-d~~nmga--amapaa~dti~~h~~d~~~~~~~yd~i~tgdlg 231 (327)
T TIGR02845 159 TVTGAGAVLLASTG----GGPRITSATIGKVVDYGIT-DPLDMGA--AMAPAAADTIEAHFKDTGRSVDDYDLIVTGDLA 231 (327)
T ss_pred EEcccEEEEEeecC----CCCceEEEEEEEEEecCCC-Ccccchh--hhhHHHHHHHHHHHHHcCCChhhccEEEecchH
Confidence 89999999998742 233332 345555543 3332321 123356788999999999999999999864444
Q ss_pred C
Q 008146 471 T 471 (576)
Q Consensus 471 t 471 (576)
.
T Consensus 232 ~ 232 (327)
T TIGR02845 232 R 232 (327)
T ss_pred H
Confidence 3
|
Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation. |
| >PLN03168 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=4.2e-10 Score=119.74 Aligned_cols=229 Identities=15% Similarity=0.150 Sum_probs=141.8
Q ss_pred hhcCCHHHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHH
Q 008146 229 SKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSA 308 (576)
Q Consensus 229 a~~mdp~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~ 308 (576)
....+-...|+.+|+.+||+++|+++++|+ .|+++++.+ ...+..+.
T Consensus 95 ~~~~~~a~~La~~Aa~~AL~~ag~~~~dId-------~lI~~T~Tg--------------------------~~~Ps~a~ 141 (389)
T PLN03168 95 DIVVVQVPKLAAEAAQKAIKEWGGRKSDIT-------HIVFATTSG--------------------------VNMPGADH 141 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEECCCC--------------------------CCCccHHH
Confidence 334445567999999999999999998776 577776542 11344688
Q ss_pred HHHHHhCCCC---ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCC
Q 008146 309 MLAMDLGWMG---PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRP 385 (576)
Q Consensus 309 ~ia~~lgl~G---p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rp 385 (576)
+++..||++. ..+.+..+|++++.+|..|.++|++|....|||+++|.+..- + . .++. ..
T Consensus 142 ~l~~~LGl~~~~~r~~d~~~gC~g~~~aL~~A~~~i~~~~~~~VLVV~~E~~S~~--~---------~----~~~~--~~ 204 (389)
T PLN03168 142 ALAKLLGLKPTVKRVMMYQTGCFGGASVLRVAKDLAENNKGARVLAVASEVTAVT--Y---------R----APSE--NH 204 (389)
T ss_pred HHHHHhCcCCcceeeeeeCCccHHHHHHHHHHHHHHHhCCCCEEEEEEEehhhhh--c---------c----Cccc--cc
Confidence 9999999975 268899999999999999999999999999999999984311 0 0 0000 00
Q ss_pred CccCCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEE-Ee--cCCC---CCCC-------CC--C--ChHHHHHHHH
Q 008146 386 WDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGS-FT--SDAY---HMTE-------PH--P--DGVGVILCIE 448 (576)
Q Consensus 386 fd~~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~-~~--~dg~---~~~~-------~~--p--~~~~~~~ai~ 448 (576)
.+..-...++||||+|+||+..+... ....++....... .. +++. ++.. .. | -...+...++
T Consensus 205 ~~~~~~~~LFGDGAaAvvl~~~~~~~-~~~~~~~~~~~~~~~~p~s~~~~~~~~~~~g~~~~l~~~vp~~i~~~~~~~l~ 283 (389)
T PLN03168 205 LDGLVGSALFGDGAGVYVVGSDPKPE-VEKALFEVHWAGETILPESDGAIDGHLTEAGLIFHLMKDVPGLISKNIEKFLN 283 (389)
T ss_pred HHHHhccccccCccEEEEEecCCCCc-cCCcceEEEeeeeEEEcCCCCccCceEecCceEEEECHHHHHHHHHHHHHHHH
Confidence 11112456789999999999643210 0112222222111 00 1111 0000 00 1 1223456777
Q ss_pred HHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCC-Cccc-ccccccccccccchhHHHH
Q 008146 449 KALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRV-NSTKSMIGHLLGAAGAVEA 513 (576)
Q Consensus 449 ~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~-~~~v-~s~K~~iGH~~gAsG~~~l 513 (576)
++|+..|+...|++++..|--|.. -++++.+.++-.. .+.. ..+-..+|++.+|+=...|
T Consensus 284 ~~l~~~~~~~~d~~~~v~Hqgg~~-----Il~~v~~~Lgl~~ek~~~s~~vl~~yGNtSSaSv~~vL 345 (389)
T PLN03168 284 EARKCVGSPDWNEMFWAVHPGGPA-----ILDQVEAKLKLTKDKMQGSRDILSEFGNMSSASVLFVL 345 (389)
T ss_pred HHHHhcCCCccccceEEecCCcHH-----HHHHHHHHcCCCHHHHHHHHHHHHHhCccHhhhHHHHH
Confidence 888888888888899999966554 4555666655332 1111 1234457888777644333
|
|
| >PLN02854 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.18 E-value=2.4e-09 Score=116.15 Aligned_cols=220 Identities=12% Similarity=0.072 Sum_probs=135.0
Q ss_pred CHHHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHH
Q 008146 233 DKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAM 312 (576)
Q Consensus 233 dp~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~ 312 (576)
.......-.++.++|+++|+++++|+ -+++. +. +....+..+.+|..
T Consensus 186 ~ea~~v~~~~~~~lL~kaGi~p~dID-------~LIv~-cS-------------------------~~~p~PSlAa~I~n 232 (521)
T PLN02854 186 AEAEAVMFGALDSLFSKTGVKPRDIG-------ILIVN-CS-------------------------LFNPTPSLSAMIVN 232 (521)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEE-CC-------------------------CCCCCCCHHHHHHH
Confidence 34556777889999999999998666 34543 32 12234567889999
Q ss_pred HhCCC-C-cccccc-CCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccC
Q 008146 313 DLGWM-G-PNYSIS-TACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDIN 389 (576)
Q Consensus 313 ~lgl~-G-p~~tv~-taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~ 389 (576)
.+|++ . .++.|+ .||++++.+|..|.++|+.|....|||+++|.+. ...+. -++.
T Consensus 233 ~LGlr~~i~afdLsgmGCSggl~aL~lA~~lL~~~~~~~aLVVstE~~S-~~~y~---------------------g~Dr 290 (521)
T PLN02854 233 HYKLRTDIKSYNLGGMGCSAGLISIDLANDLLKANPNSYAVVVSTENIT-LNWYF---------------------GNDR 290 (521)
T ss_pred HhCCCCCceEEecccchhhhHHHHHHHHHHHHHhCCCCeEEEEEEeeee-cCCCC---------------------CCch
Confidence 99997 3 688898 8999999999999999999999999999999843 11000 0111
Q ss_pred CC---cceecCceEEEEEcchHHHHhc-CCeeeEEEEEEEEecCCC-----------------CCCC--CCCChHH----
Q 008146 390 RD---GFVMGEGAGVLLLEELEHAKKR-GAKIYAEFRGGSFTSDAY-----------------HMTE--PHPDGVG---- 442 (576)
Q Consensus 390 ~~---G~v~gEGAaalvL~~~~~A~~~-g~~i~a~I~g~~~~~dg~-----------------~~~~--~~p~~~~---- 442 (576)
.. .+.+||||+|+||++.+....+ ..++...+ .+....|+. ..+. +...+..
T Consensus 291 s~lv~~~LFgDGAAAvlLs~~~~~~~~~k~~L~~~v-~t~~~ad~~~~~~i~~~~d~~G~~g~~lsk~l~~va~~~l~~~ 369 (521)
T PLN02854 291 SMLLCNCIFRMGGAAVLLSNKARDRKRSKYQLVHTV-RTHKGADDKNYNCVYQREDDKGTIGVSLARELMAVAGDALKTN 369 (521)
T ss_pred hhhcceeeeccceeEEEEecccccccccchheeeEE-EEEEeeCCCccCeEEeccCCCCcccccccccccchhhhhhhhh
Confidence 12 4678999999999874311100 01111111 111111111 0000 0000000
Q ss_pred -----------------HHHHHHHHHHHcCCCC------CCccEEEecCCCCccCcHHHHHHHHHHHcCCC--Ccccccc
Q 008146 443 -----------------VILCIEKALAHSGVSR------EDVNYINAHATSTPAGDIKEYQALIHCFGQNR--GLRVNST 497 (576)
Q Consensus 443 -----------------~~~ai~~AL~~Agl~~------~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~--~~~v~s~ 497 (576)
....+++.|.++|+++ +|||++..|..|.. -++++.+.++-.+ .-+...+
T Consensus 370 i~~~g~~Vl~~se~~~f~~~~i~~~L~~~gl~~~~pd~~~didhf~iHqggr~-----IId~v~k~LgL~~~~~e~sr~t 444 (521)
T PLN02854 370 ITTLGPLVLPLSEQFMFFVTLVRRKLLKAKVKPYIPDFKLAFEHFCIHAGGRA-----VLDELQKNLQLSDWHMEPSRMT 444 (521)
T ss_pred hhhccccccchHHHHHHHHHHHHHHHHHcCCCccCCcccccCcEEEECCCCHH-----HHHHHHHHcCCCcccccchHHH
Confidence 2456888899999997 69999999976664 3445556555321 0112223
Q ss_pred cccccccccchhHHHH
Q 008146 498 KSMIGHLLGAAGAVEA 513 (576)
Q Consensus 498 K~~iGH~~gAsG~~~l 513 (576)
-..+||+.++|=...|
T Consensus 445 L~rfGNTSSASI~~~L 460 (521)
T PLN02854 445 LHRFGNTSSSSLWYEL 460 (521)
T ss_pred hhhcCChHhhHHHHHH
Confidence 3346887766533333
|
|
| >PRK08304 stage V sporulation protein AD; Validated | Back alignment and domain information |
|---|
Probab=99.13 E-value=6.6e-10 Score=112.71 Aligned_cols=179 Identities=20% Similarity=0.171 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
...|+.+|+++||++||+++++|+ .+|+|... + ....+..++..|
T Consensus 56 eseLa~eAa~~ALekAGI~~~DID-------~lI~Gdll--------------------------~--Q~~sAs~vA~~L 100 (337)
T PRK08304 56 ERKMMEDAIQQALQKANLKKSDID-------YLLAGDLL--------------------------N--QIISANFAAREL 100 (337)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEECCC--------------------------C--CcchHHHHHHHh
Confidence 367999999999999999998777 57777421 0 012456777788
Q ss_pred CCCCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcce
Q 008146 315 GWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFV 394 (576)
Q Consensus 315 gl~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v 394 (576)
|+ |.+.|+++|+++..||..|+.+|++|.+|.+||++.+.+.....-. +.- ...+.-|| ..-..
T Consensus 101 GI--Pa~dV~gACST~~~AL~lAa~lI~SG~ad~VLVV~Ssh~s~aerqf------r~P----~eyg~qrp----~taqw 164 (337)
T PRK08304 101 GI--PFLGLYGACSTMMESLALGSMLIDGGFADRVLAATSSHFATAERQF------RFP----TEYGGQRP----PTAQW 164 (337)
T ss_pred CC--cEEEEeccCHHHHHHHHHHHHHHhcCCCCEEEEEEcchhhhhhhhc------cCc----hhccccCC----CcceE
Confidence 76 9999999999999999999999999999999999999754332111 000 01122233 22344
Q ss_pred ecCceEEEEEcchHHHHhcCCeee----EEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q 008146 395 MGEGAGVLLLEELEHAKKRGAKIY----AEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATS 470 (576)
Q Consensus 395 ~gEGAaalvL~~~~~A~~~g~~i~----a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtg 470 (576)
.++|+||+||.+. ..+.+|- ++|..+++. |...+.. ...++....|.+-|++.|.+|+|-|.|..-+.|
T Consensus 165 tvtGAGA~i~~~~----~~~~~i~~~t~Gkv~D~g~~-d~~nmga--aMapAa~dti~~h~~d~~~~~~~yDli~tGDlg 237 (337)
T PRK08304 165 TVTGAGAVLLSRE----GSGPRITHATIGKVVDLGIK-DPNDMGA--AMAPAAADTIQQHFKDTGRSPEDYDLIVTGDLG 237 (337)
T ss_pred EeeccEEEEEecC----CCCceEEEEeEEEEEecCCC-Ccccchh--hhhHHHHHHHHHHHHHcCCChhhccEEEEcchH
Confidence 7889999999863 1233321 334444443 3222221 123456788999999999999999999864444
Q ss_pred C
Q 008146 471 T 471 (576)
Q Consensus 471 t 471 (576)
.
T Consensus 238 ~ 238 (337)
T PRK08304 238 R 238 (337)
T ss_pred H
Confidence 3
|
|
| >PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.6e-10 Score=115.18 Aligned_cols=94 Identities=27% Similarity=0.288 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
...|+.++++++|+++|+++++|+ .|++|+..... ....++..++...
T Consensus 26 ~~~L~~~a~~~al~~~~i~~~~Id-------~v~~G~~~~~~-------------------------~g~~~ar~~~l~a 73 (264)
T PF00108_consen 26 PEDLAAEAVKAALERAGIDPEDID-------AVIVGNVLQEG-------------------------EGQNIARQAALAA 73 (264)
T ss_dssp HHHHHHHHHHHHHHHHTSHGGGEE-------EEEEE-SSSCT-------------------------TTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcccchhhhh-------hcCcccccccc-------------------------cchhhhhhhhhhc
Confidence 457899999999999999998777 69999865321 1334566777778
Q ss_pred CC--CCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccch
Q 008146 315 GW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIP 360 (576)
Q Consensus 315 gl--~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p 360 (576)
|| .-|.++|+.+|+||+.||++|++.|++|+.|++|+||+|.|...
T Consensus 74 Gl~~~vp~~~V~~~CaSG~~Av~~a~~~I~sG~~dvvlagGvE~mS~~ 121 (264)
T PF00108_consen 74 GLPESVPATTVNRACASGLQAVHLAAMAIASGEADVVLAGGVESMSRV 121 (264)
T ss_dssp TS-TTSEEEEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEETTTS
T ss_pred ccccccceeeehhhhhHHHHHHHHhhhhhcCCCccEEEEecccccccc
Confidence 87 34999999999999999999999999999999999999997544
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B .... |
| >TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.9e-09 Score=114.58 Aligned_cols=210 Identities=18% Similarity=0.175 Sum_probs=134.0
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
..|+.+|+++||+++ ++++|+ -+++|+..+. ......+..+...||
T Consensus 50 ~~la~~Aa~~aL~~a--~~~~Id-------~li~~t~s~~-------------------------~~~~s~a~~v~~~Lg 95 (379)
T TIGR01835 50 VTMAASAAKPILDRN--DKQKID-------MVIFGTESGI-------------------------DQSKAAAVYVHGLLG 95 (379)
T ss_pred HHHHHHHHHHHHHhC--CHhhCC-------EEEEEeCCCC-------------------------CCCCCHHHHHHHHhC
Confidence 579999999999998 666555 5778775422 112346788999999
Q ss_pred CCC--ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcc
Q 008146 316 WMG--PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGF 393 (576)
Q Consensus 316 l~G--p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~ 393 (576)
+.+ +.+.+..+|++++.||+.|.++|++|..+.+||+++|..... + ....-.
T Consensus 96 l~~~~~~~dv~~aC~gg~~aL~~A~~~i~s~~~~~aLVv~~D~a~~~------------------~--------~~~~~~ 149 (379)
T TIGR01835 96 LQPFCRSFELKQACYGATAALQMAKGHVALSPDRKVLVIASDIAKYG------------------L--------ESPGEP 149 (379)
T ss_pred CCCCceEEEeccccHHHHHHHHHHHHHHHcCCCCeEEEEEeehhhcc------------------c--------CCCCCc
Confidence 964 788999999999999999999999999999999999862100 0 011124
Q ss_pred eecCceEEEEEcchHHHHhcCCeeeEEEEEEEE-ecCCCCC----C--CCCCCh--------HHHHHHHHHHHHHcCCCC
Q 008146 394 VMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSF-TSDAYHM----T--EPHPDG--------VGVILCIEKALAHSGVSR 458 (576)
Q Consensus 394 v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~-~~dg~~~----~--~~~p~~--------~~~~~ai~~AL~~Agl~~ 458 (576)
..||||+|+||++.. .+...-.+... ..+.... . .+..++ .....++++.|+++|+++
T Consensus 150 ~~GdGA~A~Ll~~~~-------~i~~~~~~~~~~t~~~~df~~p~~~~~~~v~g~~s~~~y~~~~~~~~~~~l~~~g~~~ 222 (379)
T TIGR01835 150 TQGAGAVAMLVSADP-------KLLAINEDSVLYTDDIMDFWRPNYSTTALVDGQYSNEQYLNAFENAWNDYAKRTGLSL 222 (379)
T ss_pred cccCccEEEEEecCC-------CeeEEeccceeeecCCCCccCCCCCCceeECcHHHHHHHHHHHHHHHHHHHHHhCCCH
Confidence 579999999998531 22211111111 1121110 0 111122 134578889999999999
Q ss_pred CCccEEEecCCCCccCcHHHHHHHHHHHcCCC-C----cc-----cccccccccccccchhHHHHHHH
Q 008146 459 EDVNYINAHATSTPAGDIKEYQALIHCFGQNR-G----LR-----VNSTKSMIGHLLGAAGAVEAIAV 516 (576)
Q Consensus 459 ~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~-~----~~-----v~s~K~~iGH~~gAsG~~~li~~ 516 (576)
+||+++..|-..++++- +++.++..... + +. -.-.-..+||+.+|+=.+.|..+
T Consensus 223 ~did~~i~H~p~~~~~~----k~~~~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~l~L~~~ 286 (379)
T TIGR01835 223 ADFAAFCFHVPFTKMGL----KALRHILKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLYLGLASL 286 (379)
T ss_pred HHcCEEEECCCCCcHHH----HHHHHHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHHHHHHHH
Confidence 99999999987666432 22222221100 0 00 00123368999888766666544
|
This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event. |
| >PLN02377 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.4e-08 Score=108.39 Aligned_cols=120 Identities=11% Similarity=0.155 Sum_probs=92.1
Q ss_pred CCHHHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHH
Q 008146 232 MDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLA 311 (576)
Q Consensus 232 mdp~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia 311 (576)
......++..|+.+||+++|+++++|+ -+++ ++. +....+..+.+|.
T Consensus 169 ~~ea~~l~~~A~~~aL~kaGi~p~dID-------~LVv-~cS-------------------------~~~~~PSlaa~V~ 215 (502)
T PLN02377 169 REEAEQVMFGALDNLFANTNVNPKDIG-------ILVV-NCS-------------------------LFNPTPSLSAMIV 215 (502)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEE-ECC-------------------------CCCCCCcHHHHHH
Confidence 344678899999999999999998665 3444 432 1223456789999
Q ss_pred HHhCCCC--cccccc-CCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCcc
Q 008146 312 MDLGWMG--PNYSIS-TACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDI 388 (576)
Q Consensus 312 ~~lgl~G--p~~tv~-taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~ 388 (576)
..||++. .++.++ .||++++.+|..|.++|+.|....|||+++|.+...+ + +++
T Consensus 216 ~~LGlr~~v~afdL~gmGCsggl~aL~lA~~ll~~~~~~~aLVVstE~~S~~~-~----------------------~~d 272 (502)
T PLN02377 216 NKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDMLQVHRNTYAVVVSTENITQNW-Y----------------------FGN 272 (502)
T ss_pred HHhCCCCCCeEEecccchhhHHHHHHHHHHHHHHcCCCCEEEEEEEecccccc-C----------------------CCC
Confidence 9999974 789999 6999999999999999999999999999999843111 0 112
Q ss_pred CCC----cceecCceEEEEEcch
Q 008146 389 NRD----GFVMGEGAGVLLLEEL 407 (576)
Q Consensus 389 ~~~----G~v~gEGAaalvL~~~ 407 (576)
++. ...+||||+|+||++.
T Consensus 273 ~~s~lv~n~LFgDGAaAvlLs~~ 295 (502)
T PLN02377 273 KKSMLIPNCLFRVGGSAVLLSNK 295 (502)
T ss_pred CccccccceeeccccEEEEEecc
Confidence 222 3678999999999863
|
|
| >PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.1e-09 Score=96.79 Aligned_cols=121 Identities=22% Similarity=0.367 Sum_probs=83.9
Q ss_pred eeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCC-CCccc
Q 008146 416 KIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRV 494 (576)
Q Consensus 416 ~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~-~~~~v 494 (576)
+|+++|.++..... .|...+.+...+++++|+++|++++|||++|.|..++. .++..+ +.++-. .++++
T Consensus 2 ~pla~i~~~~~~~~-----~P~~~~~~p~~A~~~al~~ag~~~~did~~Ei~EaFA~----~~l~~~-~~lg~~~~~vN~ 71 (123)
T PF02803_consen 2 KPLARIVGYASAGV-----DPEDMGLGPVPAARKALERAGLTPDDIDVIEINEAFAA----QVLAFL-EALGLDPEKVNP 71 (123)
T ss_dssp -ESEEEEEEEEEE-------GGGGGGTHHHHHHHHHHHHT--GGGESEEEE--SBHH----HHHHHH-HHHTTGGGGBST
T ss_pred CeEEEEEEEEEEec-----CHHHhCchHHHHHHHHHHHhCCCccccchhhccchhhh----HHHHhh-ccccccccccCc
Confidence 57899999887632 23333456678999999999999999999999988774 333333 334432 34555
Q ss_pred ccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 495 NSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 495 ~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
+...-.+|||.||+|+..++.++.+|+++ ..++++.+.-+-||....+|||+
T Consensus 72 ~GG~la~GHP~gasG~r~~~~l~~~L~~~----------------------------~~~~gla~~~~ggG~g~a~ller 123 (123)
T PF02803_consen 72 NGGALALGHPLGASGARLVVELAHQLRRR----------------------------GGRYGLAAICAGGGQGSAVLLER 123 (123)
T ss_dssp T--HHHH-BHTTTHHHHHHHHHHHHHHHH----------------------------TTSEEEEEEEETTTEEEEEEEEE
T ss_pred ccccccccccccccccchhhhhHHHHHHh----------------------------chhhhhHHhcccceeeEEEEEEC
Confidence 55555679999999999999999999861 13567777788899999999985
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C .... |
| >PLN02577 hydroxymethylglutaryl-CoA synthase | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.5e-08 Score=109.01 Aligned_cols=220 Identities=20% Similarity=0.231 Sum_probs=133.9
Q ss_pred cEEEEecceecCCC-CCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 008146 166 RVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 244 (576)
Q Consensus 166 ~IaItGmg~~~P~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa~ 244 (576)
.|-|.|+|..+|.. .+.+++-+.+ |.+ +.|-..+...+ .+. +..+ . ....-|+.+|++
T Consensus 4 ~vgI~gig~Y~P~~~v~n~eLa~~~--g~~-----~~~~~~GI~~r------~~a---va~~----~-Ed~~tmA~~AA~ 62 (459)
T PLN02577 4 NVGILAMEVYFPPTCVQQEALEAHD--GVS-----KGKYTIGLGQD------CMA---FCTD----V-EDVISMSLTVVK 62 (459)
T ss_pred ccEEEEEEEeCCCeEEcHHHHHHHh--CCC-----HHHHhhcccee------Eec---cCCC----C-CCHHHHHHHHHH
Confidence 58899999999998 6777665432 221 11100000000 000 0001 1 124579999999
Q ss_pred HHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHH---HHhCCCC-cc
Q 008146 245 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLA---MDLGWMG-PN 320 (576)
Q Consensus 245 eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia---~~lgl~G-p~ 320 (576)
.+|+++|+++++|+ -|++|+..+.. .....+..+. ..+|... ++
T Consensus 63 ~aL~~agid~~~Id-------llivaTeT~~d-------------------------~~ps~A~~v~~ll~~LG~~~~~a 110 (459)
T PLN02577 63 SLLEKYNIDPKQIG-------RLEVGSETVID-------------------------KSKSIKTFLMQLFEESGNTDIEG 110 (459)
T ss_pred HHHHHcCCCHHHCC-------EEEEEcCCCCC-------------------------CCCchHHHHHHHHHHhCCCCcEE
Confidence 99999999998776 58888765321 1233455554 4456643 78
Q ss_pred ccccCCCchHHHHHHHHHHHHHcCCC--CEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCc
Q 008146 321 YSISTACATSNFCILNAANHIIRGEA--NVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEG 398 (576)
Q Consensus 321 ~tv~taCaSgl~AL~~A~~~I~~G~~--d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEG 398 (576)
+-+..+|.++..||..|.++|++|.. +.+||+|+|...... .+ .+| .-|+|
T Consensus 111 fDi~~AC~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~a~~~~----------------~~---~e~--------t~GdG 163 (459)
T PLN02577 111 VDSTNACYGGTAALLNCVNWVESSSWDGRYGLVVAADSAVYAE----------------GP---ARP--------TGGAG 163 (459)
T ss_pred eehhhhhHHHHHHHHHHHHHHHcCCCCCCeEEEEEechhhccC----------------CC---CCC--------CCCcc
Confidence 89999999999999999999999975 999999999722110 00 011 23999
Q ss_pred eEEEEEcchHHHHhcCCeeeEEEE----EEEEecCCCCCCCC-------CCCh--------HHHHHHHHHHHHHc-----
Q 008146 399 AGVLLLEELEHAKKRGAKIYAEFR----GGSFTSDAYHMTEP-------HPDG--------VGVILCIEKALAHS----- 454 (576)
Q Consensus 399 AaalvL~~~~~A~~~g~~i~a~I~----g~~~~~dg~~~~~~-------~p~~--------~~~~~ai~~AL~~A----- 454 (576)
|+|+||+..+ + ..|. |... .+......| ..++ ..+..++++.+++.
T Consensus 164 A~A~lv~~~~-------~--~~l~~~~~g~~~-~~~~Df~rP~~~~~~~~vdG~~s~~~yl~~~~~~~~~~~~k~~~~~~ 233 (459)
T PLN02577 164 AVAMLVGPNA-------P--IVFESKYRGSHM-AHVYDFYKPDLASEYPVVDGKLSQTCYLMALDSCYKRFCEKYEKLEG 233 (459)
T ss_pred eEEEEEccCC-------C--ceeecccccccC-cccchhcccCCCCCceEEcchHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 9999998532 1 1222 1111 111111111 1122 12334555555555
Q ss_pred -CCCCCCccEEEecCCCCccCc
Q 008146 455 -GVSREDVNYINAHATSTPAGD 475 (576)
Q Consensus 455 -gl~~~dId~ve~Hgtgt~~gD 475 (576)
|++++|+||+..|-..+++.-
T Consensus 234 ~g~~~~d~d~~vfHqP~~km~~ 255 (459)
T PLN02577 234 KQFSISDADYFVFHAPYNKLVQ 255 (459)
T ss_pred cCCCHHHcCEEEecCCccchhH
Confidence 889999999999998887543
|
|
| >COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.2e-07 Score=97.73 Aligned_cols=215 Identities=21% Similarity=0.238 Sum_probs=146.9
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
..-|+++|++++|.++++++..|. .|++|+.++.... -..+..++..|
T Consensus 51 ~vTmaveAA~~~l~r~~~D~~~Ig-------~v~vgTES~~d~~-------------------------K~~at~v~~~l 98 (377)
T COG3425 51 AVTMAVEAARNALKRADIDPSKIG-------AVIVGSESGPDAV-------------------------KPTATIVAEAL 98 (377)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCc-------eEEEecCCCcccc-------------------------cchHHHHHHHh
Confidence 456899999999999999987555 6899987643321 12467788889
Q ss_pred CCCC--ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCc
Q 008146 315 GWMG--PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDG 392 (576)
Q Consensus 315 gl~G--p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G 392 (576)
|+.- -.+-+..+|-++..||+.|..+|.+|..+.+||+|.|..... |... --
T Consensus 99 g~~~~~~~~d~~~AC~agT~aL~~a~~~v~s~~~~~~LvI~sD~a~~~------------------~~~~--------~E 152 (377)
T COG3425 99 GLNPSARAADVEFACYAGTAALQAAIGWVESGMISYGLVIGADTAQYA------------------PGDA--------LE 152 (377)
T ss_pred CCCCceehhhHHHHHHHHHHHHHHHHHHHHcCCccceEEEeehhhccC------------------CCcc--------cC
Confidence 9864 345588899999999999999999999999999999973211 1111 12
Q ss_pred ceecCceEEEEEcchHHHHhcCCeeeEEEEEEEE-ecCCCCC----CCCCCC----------hHHHHHHHHHHHHHcCCC
Q 008146 393 FVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSF-TSDAYHM----TEPHPD----------GVGVILCIEKALAHSGVS 457 (576)
Q Consensus 393 ~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~-~~dg~~~----~~~~p~----------~~~~~~ai~~AL~~Agl~ 457 (576)
+.-|.|++|+|+... ..+.+++.+.+. +.|-... ..+.|. ......+++..+++.|++
T Consensus 153 ~t~GAGavA~lIg~n-------~~~~a~~~~~~syt~d~~DFwRp~~~~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~gls 225 (377)
T COG3425 153 YTAGAGAVAFLIGKN-------PPIVAEFEGTGSYTTDTPDFWRPDGQPYPYVDGRFSEPAYFKHVENAAKGYMEKTGLS 225 (377)
T ss_pred ccCCCceEEEEEccC-------CCeEEEecCceEEecCCCcccccCCCcccccCceecHHHHHHHHHHHHHHHHHHhCCC
Confidence 346899999999852 344555545433 3343311 112222 245667888888999999
Q ss_pred CCCccEEEecCCCCccCcHHHHHHHHHHHcCCCCccccccc-ccccccccchhHHHHHHHHH
Q 008146 458 REDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTK-SMIGHLLGAAGAVEAIAVVQ 518 (576)
Q Consensus 458 ~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~~~~v~s~K-~~iGH~~gAsG~~~li~~~l 518 (576)
++|.||+..|-..+++. ..+++.+.-..+.+.-+-.- .++|++..+|..++|+.++-
T Consensus 226 ~~dfdy~vfH~P~~k~~----~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~L~ 283 (377)
T COG3425 226 PDDFDYIVFHQPNGKFP----KKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLD 283 (377)
T ss_pred hhhhCeEEecCCCCchH----HHHHHHhCccHhhcCccchhhhhcCcccchhHHHHHHHHHh
Confidence 99999999999888642 33343332221122222222 26899999999988887654
|
|
| >PRK12404 stage V sporulation protein AD; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=4.6e-08 Score=98.81 Aligned_cols=179 Identities=19% Similarity=0.176 Sum_probs=118.9
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
...|+.+|+.+||++||+++++|+ -+|+|+..+ ..+.+..++..|
T Consensus 54 E~~L~~EA~~~AL~kAGI~~~DID-------~i~vGdL~n----------------------------Q~ipssfvar~L 98 (334)
T PRK12404 54 ERKLLEEACSRAIEKAKLRKEDIQ-------FFLAGDLMN----------------------------QITPTSFAARTL 98 (334)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCC----------------------------CcCcHHHHHHHh
Confidence 357999999999999999998776 577776431 112344677778
Q ss_pred CCCCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcce
Q 008146 315 GWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFV 394 (576)
Q Consensus 315 gl~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v 394 (576)
|+ |.+.|.++|+++..||..|+.+|++|.+|.|||+......+...-.- .- ..-+.-||.. +.-.|
T Consensus 99 GI--P~~gV~gACSTg~eAL~lAa~~VaSG~Ad~VLavtsSH~~~aErqfR------~P----~eyG~Qrp~t--aqwTv 164 (334)
T PRK12404 99 GI--PYLGLFGACSTSMEGLALAALIVNSGGAKYVLTGASSHNAAVEKQFR------YP----TEYGGQKPPT--AQWTV 164 (334)
T ss_pred CC--CccceeecCHHHHHHHHHHHHHHHcCCCCEEEEEeCcccchhhhhcc------Cc----ccccCcCCCc--ccEEE
Confidence 84 78999999999999999999999999999999988776443321111 00 0123344432 22223
Q ss_pred ecCceEEEEEcchHHHHhcCCeee----EEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q 008146 395 MGEGAGVLLLEELEHAKKRGAKIY----AEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATS 470 (576)
Q Consensus 395 ~gEGAaalvL~~~~~A~~~g~~i~----a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtg 470 (576)
-|+|++||.+. ..+.+|- ++|..+++. |...+.. ...++....|.+-+++.|.+|+|-|.|..-+.|
T Consensus 165 --Tgaga~~l~~~----~~~~~i~~~T~Gkv~D~g~~-d~~nMGa--aMAPAA~dti~~h~~d~~~~~~~yDlI~TGDLg 235 (334)
T PRK12404 165 --TGAGAAILSKT----GDGPRVTSATIGRVVDMGLT-DPFNMGG--AMAPAAVDTIEAHLRDRQIDASYYDLIVTGDLG 235 (334)
T ss_pred --EceEEEEEecC----CCCceEEEEEEEEEEecCCC-Ccccchh--hhhHHHHHHHHHHHHHhCCChhhccEEEEcchH
Confidence 47888888753 1233332 334444443 3332221 123456788999999999999999999864444
Q ss_pred C
Q 008146 471 T 471 (576)
Q Consensus 471 t 471 (576)
.
T Consensus 236 ~ 236 (334)
T PRK12404 236 H 236 (334)
T ss_pred H
Confidence 3
|
|
| >PLN02932 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=98.84 E-value=5.5e-08 Score=104.99 Aligned_cols=125 Identities=11% Similarity=0.125 Sum_probs=94.3
Q ss_pred CCHHHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHH
Q 008146 232 MDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLA 311 (576)
Q Consensus 232 mdp~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia 311 (576)
.+....++.+|+.+||+++|++|++|+ -+++.++.+ ...+..+.+|.
T Consensus 145 ~~ea~~la~~Aa~~aL~~agi~p~dId-------~lIv~tst~--------------------------~~~Pslaa~V~ 191 (478)
T PLN02932 145 RKETEEVIIGAVDNLFRNTGISPSDIG-------ILVVNSSTF--------------------------NPTPSLSSILV 191 (478)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEccCC--------------------------CCCCcHHHHHH
Confidence 344667999999999999999998666 456665431 23456788999
Q ss_pred HHhCCC-C-cccccc-CCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCcc
Q 008146 312 MDLGWM-G-PNYSIS-TACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDI 388 (576)
Q Consensus 312 ~~lgl~-G-p~~tv~-taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~ 388 (576)
..+|++ . .++.|+ .||++++.+|..|.++|+.|....|||+++|.+..-. + +.. .+ +.
T Consensus 192 ~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~~~~~~~aLVVstE~~S~~~-~---------------~~d-~r--~~ 252 (478)
T PLN02932 192 NKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVSTENITQNL-Y---------------LGN-NK--SM 252 (478)
T ss_pred HHhCCCCCceEEEeccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEeeccccc-C---------------CCc-ch--hh
Confidence 999996 3 789999 8999999999999999999999999999999843221 1 000 00 00
Q ss_pred CCCcceecCceEEEEEcchH
Q 008146 389 NRDGFVMGEGAGVLLLEELE 408 (576)
Q Consensus 389 ~~~G~v~gEGAaalvL~~~~ 408 (576)
.-...++|||++|+||++.+
T Consensus 253 l~t~~LFgDGAAAvlLs~~~ 272 (478)
T PLN02932 253 LVTNCLFRIGGAAILLSNRS 272 (478)
T ss_pred hccceeecccceEEEEeccc
Confidence 01346789999999999743
|
|
| >TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade | Back alignment and domain information |
|---|
Probab=98.78 E-value=6.1e-07 Score=96.62 Aligned_cols=115 Identities=18% Similarity=0.122 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
...|++.|+..+|+++|+++++|+ -|++|+..+.. .....+..+...|
T Consensus 50 ~~tma~~AA~~lL~~a~id~~~Id-------~Liv~TeS~~d-------------------------~sps~a~~v~~lL 97 (454)
T TIGR01833 50 INSLCLTVVSKLMERYNIDYNQIG-------RLEVGTETIID-------------------------KSKSVKTVLMQLF 97 (454)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEECCCCCC-------------------------CCCchHHHHHHHH
Confidence 467999999999999999998666 57788764321 1233466677655
Q ss_pred C---CCC-ccccccCCCchHHHHHHHHHHHHHcCCC--CEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCcc
Q 008146 315 G---WMG-PNYSISTACATSNFCILNAANHIIRGEA--NVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDI 388 (576)
Q Consensus 315 g---l~G-p~~tv~taCaSgl~AL~~A~~~I~~G~~--d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~ 388 (576)
+ ... .++-+..+|+++..||..|..+|++|.. +.+||++.|..... .....
T Consensus 98 ~~lG~~~~~~fDi~~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDia~y~-------------------~~~~~---- 154 (454)
T TIGR01833 98 EESGNTDVEGIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDIAVYA-------------------KGNAR---- 154 (454)
T ss_pred HhcCCCCceEEeccccchhHHHHHHHHHHHHHcCCcCCCeEEEEEecccccc-------------------CCCee----
Confidence 4 332 5788999999999999999999999974 99999999972111 00111
Q ss_pred CCCcceecCceEEEEEcchH
Q 008146 389 NRDGFVMGEGAGVLLLEELE 408 (576)
Q Consensus 389 ~~~G~v~gEGAaalvL~~~~ 408 (576)
...|+||+|+||++..
T Consensus 155 ----~t~GaGAvAmLv~~~~ 170 (454)
T TIGR01833 155 ----PTGGAGAVAMLIGPNA 170 (454)
T ss_pred ----eccccceEEEEeccCc
Confidence 1359999999998543
|
Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes. |
| >PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=98.76 E-value=8.8e-08 Score=93.06 Aligned_cols=123 Identities=19% Similarity=0.313 Sum_probs=110.2
Q ss_pred CCCChhhhhcCCHHHHHHHHHHHHHHHhC-CCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccc
Q 008146 222 GWVAPKLSKRMDKFMLYLLTAGKKALADG-GITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPF 300 (576)
Q Consensus 222 ~~i~~~~a~~mdp~~rl~l~aa~eAL~dA-Gi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~ 300 (576)
.+|++.+.|||++..||+++++.+++++. .++ .+++++..|++....+.++.+..+ +.++|..|..
T Consensus 21 ~~lp~m~rRRls~~~rla~~~a~~~~~~~~~~d------------~~VfaS~~Gel~~t~~ll~~l~~~-~~lSPT~Fs~ 87 (218)
T PF13723_consen 21 AFLPPMQRRRLSRLSRLALEAALECLAEDEQPD------------AIVFASRHGELERTFKLLEALAEE-EELSPTAFSQ 87 (218)
T ss_pred ccCCHHHHcccCHHHHHHHHHHHHHHhccCCCC------------cEEEEeCCCcHHHHHHHHHHHHhC-CCcCccchhh
Confidence 45999999999999999999999998652 221 688899999999988888888654 5689999999
Q ss_pred cccchhHHHHHHHhCCCCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEecccccc
Q 008146 301 ATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAV 358 (576)
Q Consensus 301 ~~~~~~a~~ia~~lgl~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~ 358 (576)
++.|..++++++..+.++|+.+|..+-.|...||..|+..|..| .+-||++.+|..+
T Consensus 88 SVHNA~aG~~sI~~~~~~~~tal~a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~ 144 (218)
T PF13723_consen 88 SVHNAAAGYWSIATKNTGPNTALAAGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPL 144 (218)
T ss_pred hhhhHHHHHHHHHhCCCCceEEEecCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCC
Confidence 99999999999999999999999999999999999999999999 8899999999844
|
|
| >PLN02192 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.3e-07 Score=102.54 Aligned_cols=118 Identities=15% Similarity=0.121 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHH
Q 008146 234 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 313 (576)
Q Consensus 234 p~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~ 313 (576)
....++..|+.+||+++|++|++|+ -+++.++ +....+..+.+|...
T Consensus 175 Ea~~~~~~Aa~~aL~kaGi~p~DID-------iLIv~~S--------------------------~~~~~PSlaa~I~n~ 221 (511)
T PLN02192 175 EAETVMFGAIDQLLAKTSVKPKDIG-------ILIVNCS--------------------------LFNPTPSLSAMVINH 221 (511)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEECC--------------------------CCCCCchHHHHHHHH
Confidence 3567889999999999999998665 3444432 123346678899999
Q ss_pred hCCCC--cccccc-CCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCC
Q 008146 314 LGWMG--PNYSIS-TACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINR 390 (576)
Q Consensus 314 lgl~G--p~~tv~-taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~ 390 (576)
+|++. +++.++ .||++++.||..|.++|+.+....|||+++|.+. ...+. +.++
T Consensus 222 lGlr~~i~afdLsgmGCSggl~aLdlA~~lL~a~~~~~aLVVstE~~S-~n~y~----------------------g~dr 278 (511)
T PLN02192 222 YKLRGNILSYNLGGMGCSAGLISIDLAKHLLQVHPNSYALVISMENIT-LNWYF----------------------GNDR 278 (511)
T ss_pred hCCCCCceEEEcccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEEecc-ccCCC----------------------CCCH
Confidence 99974 799999 6999999999999999999999999999999844 11000 1111
Q ss_pred Cc----ceecCceEEEEEcch
Q 008146 391 DG----FVMGEGAGVLLLEEL 407 (576)
Q Consensus 391 ~G----~v~gEGAaalvL~~~ 407 (576)
.- .++||||||+||++.
T Consensus 279 s~lv~n~LFgDGAaAvLLs~~ 299 (511)
T PLN02192 279 SMLVSNCLFRMGGAAILLSNK 299 (511)
T ss_pred HHHhccccccccceEEEEecc
Confidence 11 457999999999874
|
|
| >COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.38 E-value=3.6e-06 Score=83.56 Aligned_cols=190 Identities=14% Similarity=0.133 Sum_probs=128.8
Q ss_pred CCHHHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHH
Q 008146 232 MDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLA 311 (576)
Q Consensus 232 mdp~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia 311 (576)
+.....|..++.++||+++++.+++|+ .|++.++. +...+.+-.+|.
T Consensus 73 ie~a~~l~v~a~r~aL~~~~l~pedId-------~vv~vtsT--------------------------G~~~Ps~dari~ 119 (356)
T COG3424 73 IEEAVPLGVDALRRALDGSPLRPEDID-------AVVTVTST--------------------------GLATPSLDARIV 119 (356)
T ss_pred HHHHHHHHHHHHHHHhccCCCCHHHCc-------EEEEEeec--------------------------cccCCChhHHHH
Confidence 344567899999999999999998666 45555443 223344456778
Q ss_pred HHhCCCCc---cccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCcc
Q 008146 312 MDLGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDI 388 (576)
Q Consensus 312 ~~lgl~Gp---~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~ 388 (576)
..|||.-- ...-.-||+.+..++..|.+..|..-...|||+.+|.+.-.. ++.+
T Consensus 120 ~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~P~~~vlvV~vELCSLt~-----------------------~~~d 176 (356)
T COG3424 120 GELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPDANVLVVCVELCSLTY-----------------------VFAD 176 (356)
T ss_pred hhcCCCCccceeeeecchhhhhhhHHHHHHHHHhhCccceEEEEEeeeeeeee-----------------------ecCC
Confidence 88888531 222457899999999999999999999999999999853211 1111
Q ss_pred CCC-c----ceecCceEEEEEcchHHHHhc---CCeee----------EEEEEEEEecCCCCCC--CCCC--ChHHHHHH
Q 008146 389 NRD-G----FVMGEGAGVLLLEELEHAKKR---GAKIY----------AEFRGGSFTSDAYHMT--EPHP--DGVGVILC 446 (576)
Q Consensus 389 ~~~-G----~v~gEGAaalvL~~~~~A~~~---g~~i~----------a~I~g~~~~~dg~~~~--~~~p--~~~~~~~a 446 (576)
+.+ . -++|||++|+|+.-...+... +..|+ =.+.||.++.+|.+.. ..-| -...+...
T Consensus 177 ~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s~StL~~dse~~Mgwdv~d~G~~~vlSrdlp~lIe~~l~~~ 256 (356)
T COG3424 177 DTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSFSTLYPDSEDIMGWDVGDQGLKVVLSRDLPNLIESYLAPN 256 (356)
T ss_pred CCcccceeeeeecCCeeEEEEeccccccccCCCCceecccccccCCccccccceeecCCcEEEEEcCchhHHHHHHhhhh
Confidence 111 2 247999999999753222111 11111 1356788888877532 2222 24556778
Q ss_pred HHHHHHHcCCCCCCccEEEecCCCCccCcHH
Q 008146 447 IEKALAHSGVSREDVNYINAHATSTPAGDIK 477 (576)
Q Consensus 447 i~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~ 477 (576)
+...|...|++.+||+.+.+|--|-+.-|..
T Consensus 257 V~~fL~~~~ls~~dI~~w~~HPGG~KVida~ 287 (356)
T COG3424 257 VTTFLATHGLSIEDIEAWVVHPGGPKVIDAY 287 (356)
T ss_pred HHHHHHHcCCchhhhceeeeCCCCchHHHHH
Confidence 8999999999999999999997777654433
|
|
| >PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species | Back alignment and domain information |
|---|
Probab=98.38 E-value=2.8e-06 Score=85.25 Aligned_cols=187 Identities=15% Similarity=0.207 Sum_probs=118.9
Q ss_pred CCcEEEEecceecCCC---CCHHHHHHHHHcCCCcceec-cCC-----CCCCCCccccccccCCCCCCC--CChh--hhh
Q 008146 164 QKRVVVTGMGLVSPLG---HEPDVFYNNLLEGVSGISEI-ETF-----DCTSFPTKIAAEIKSFSTDGW--VAPK--LSK 230 (576)
Q Consensus 164 ~~~IaItGmg~~~P~g---~~~~~~w~~L~~G~~~i~~~-~~~-----~~~~~~~~~~g~v~~fd~~~~--i~~~--~a~ 230 (576)
.++|+++.++|.-|.. .+.+.+++....... +++- -.| ..+++ |+ ..+-++.. ++|. ...
T Consensus 6 ~r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~-f~~~sl~F~~kIlerSGl-----G~-eTy~P~~~~~~p~~~s~~~ 78 (290)
T PF08392_consen 6 PRPVYLVDFACYKPPDELRVSREEFIEHARRCGR-FDEESLDFQRKILERSGL-----GD-ETYLPPALHEIPPDPSLAA 78 (290)
T ss_pred CCCEEEEeeeecCCCcccccCHHHHHHHHHhccc-CChhHHHHHHHHHHhcCC-----Cc-cccCCcccccCCCcccHHH
Confidence 3579999999999887 467788876654321 1110 000 00010 00 00111111 2222 112
Q ss_pred cCCHHHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHH
Q 008146 231 RMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAML 310 (576)
Q Consensus 231 ~mdp~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~i 310 (576)
..+....++-.++.++|+.+|+.|++|+ .+++.++. +...+.++.+|
T Consensus 79 a~~Eae~v~f~av~~LL~ktgv~p~dId-------iLVvncs~--------------------------f~ptPSLsamI 125 (290)
T PF08392_consen 79 AREEAEMVIFGAVDDLLAKTGVKPSDID-------ILVVNCSL--------------------------FNPTPSLSAMI 125 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEECcC--------------------------CCcCCcHHHHH
Confidence 2244556788899999999999998665 45555432 33455678899
Q ss_pred HHHhCCCCc--ccc-ccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCc
Q 008146 311 AMDLGWMGP--NYS-ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWD 387 (576)
Q Consensus 311 a~~lgl~Gp--~~t-v~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd 387 (576)
...+|++.- ++. -..||++|+.+|.+|.++|+...-..|||+.+|... +..+.+-.+.-.++
T Consensus 126 vnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~~~p~~~ALVVstE~~s-~~~Y~G~~rsmlv~-------------- 190 (290)
T PF08392_consen 126 VNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQAHPNSYALVVSTENIS-ANWYRGNDRSMLVS-------------- 190 (290)
T ss_pred HHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHHhCCCcEEEEEEEeecc-cccccCCcHHHhhc--------------
Confidence 999999863 444 346899999999999999999999999999999844 33333333333332
Q ss_pred cCCCcceecCceEEEEEcchHH
Q 008146 388 INRDGFVMGEGAGVLLLEELEH 409 (576)
Q Consensus 388 ~~~~G~v~gEGAaalvL~~~~~ 409 (576)
..++.+|++|+||.+...
T Consensus 191 ----NcLFr~GgAAvLLSn~~~ 208 (290)
T PF08392_consen 191 ----NCLFRMGGAAVLLSNKPS 208 (290)
T ss_pred ----cccccCCceeEEeecCcc
Confidence 345789999999987654
|
The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane |
| >PLN00415 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=98.33 E-value=1e-05 Score=86.70 Aligned_cols=121 Identities=12% Similarity=0.146 Sum_probs=83.5
Q ss_pred HHHHHH-HHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 236 MLYLLT-AGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 236 ~rl~l~-aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
..+.+. |+.+||+++|+++++|+ -|++ ++.+ ....+..+.++...+
T Consensus 134 ~em~i~~A~~~aL~~aGi~p~dID-------~LIv-s~T~-------------------------~~~~Pslaa~l~~~L 180 (466)
T PLN00415 134 SELVIFGALNSLFKKTGIEPREVG-------IFIV-NCSL-------------------------FNPNPSLSSMIVNRY 180 (466)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEE-ECcC-------------------------CCCCchHHHHHHHHh
Confidence 444444 77788999999998665 2333 2221 112355678899999
Q ss_pred CCC-C-ccccccC-CCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCC
Q 008146 315 GWM-G-PNYSIST-ACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRD 391 (576)
Q Consensus 315 gl~-G-p~~tv~t-aCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~ 391 (576)
|++ . ..+.|+. ||++++.+|..|.+.++.+....+||+++|.+.... +..-.+...+ .
T Consensus 181 GLr~~v~~~dL~gmGCsggv~aL~lA~~ll~a~~~~~aLVVs~E~~S~~~-~~~~dr~~lv------------------~ 241 (466)
T PLN00415 181 KLKTDVKTYNLSGMGCSAGAISVDLATNLLKANPNTYAVIVSTENMTLSM-YRGNDRSMLV------------------P 241 (466)
T ss_pred CCCCCceEEEeccccchHHHHHHHHHHHHHHhCCCCEEEEEEEecccccc-cCCCcHhHhc------------------c
Confidence 997 2 5778887 999999999999999999999999999999843111 0000000000 1
Q ss_pred cceecCceEEEEEcchH
Q 008146 392 GFVMGEGAGVLLLEELE 408 (576)
Q Consensus 392 G~v~gEGAaalvL~~~~ 408 (576)
..++||||+|+||++..
T Consensus 242 n~LFgDGAAAvlLs~~~ 258 (466)
T PLN00415 242 NCLFRVGGAAVMLSNRS 258 (466)
T ss_pred ceeecccceEEEEecCc
Confidence 25679999999999743
|
|
| >PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=97.88 E-value=5.2e-05 Score=74.04 Aligned_cols=94 Identities=16% Similarity=0.061 Sum_probs=69.2
Q ss_pred CCHHHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHH
Q 008146 232 MDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLA 311 (576)
Q Consensus 232 mdp~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia 311 (576)
......|+.+|+.+||+++|+++++|+ .+++-++. +...+.+-.++.
T Consensus 97 ~~~a~~L~~~Aa~~AL~~~g~~~~dIt-------hlv~vs~T--------------------------G~~~PglD~~l~ 143 (226)
T PF00195_consen 97 AEEAPPLAEEAARKALAEAGLDPSDIT-------HLVTVSCT--------------------------GIAAPGLDARLI 143 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHTS-GGGEC-------EEEEEESS--------------------------SSECS-HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcccc-------eEEEEecC--------------------------CcCCCchhHHHH
Confidence 344567899999999999999987665 56655543 233445567888
Q ss_pred HHhCCCC---ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEecccccc
Q 008146 312 MDLGWMG---PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAV 358 (576)
Q Consensus 312 ~~lgl~G---p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~ 358 (576)
..|||+. -......||..|..+|..|.+..++..-..|||+.+|.+.
T Consensus 144 ~~LgL~~~v~R~~i~~~GC~gg~~~L~~A~~~~~~~p~a~VLvv~vElcs 193 (226)
T PF00195_consen 144 NRLGLRPDVQRTPIFGMGCAGGAAGLRRAKDIARANPGARVLVVCVELCS 193 (226)
T ss_dssp HHHT--TTSEEEEEES-GGGHHHHHHHHHHHHHHHSTT-EEEEEEEEEGG
T ss_pred hcCCCCCCcEEEEEeccchhhHHHHHHHHHHHHhCCccceEEEEEEEeeE
Confidence 8999964 2345678999999999999999999999999999999854
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A .... |
| >PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways | Back alignment and domain information |
|---|
Probab=97.88 E-value=1e-05 Score=66.22 Aligned_cols=64 Identities=27% Similarity=0.386 Sum_probs=47.2
Q ss_pred ccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceE
Q 008146 321 YSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 400 (576)
Q Consensus 321 ~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAa 400 (576)
+-|+.+|++++.||+.|..+|++|.++.+|+++.|........ ......+++||||+
T Consensus 1 fDi~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~~~~~-----------------------~~~~~~~~~gDgAa 57 (80)
T PF08545_consen 1 FDINQACAGFLYALDVAAALIASGRAKNALVVGGDRLSRIVDR-----------------------TDRQTAFIFGDGAA 57 (80)
T ss_dssp EEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGGGSHT-----------------------THHHHHTTB-EEEE
T ss_pred CcccccchHHHHHHHHHHHHHhhccCCEEEEEeeccccccccc-----------------------cccCcceeecchhe
Confidence 3478899999999999999999999999999999984321100 01123357899999
Q ss_pred EEEEcch
Q 008146 401 VLLLEEL 407 (576)
Q Consensus 401 alvL~~~ 407 (576)
|+||++.
T Consensus 58 A~vl~~~ 64 (80)
T PF08545_consen 58 AVVLSRD 64 (80)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 9999975
|
The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. |
| >PRK06060 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=97.71 E-value=1.4e-05 Score=92.11 Aligned_cols=51 Identities=6% Similarity=-0.000 Sum_probs=48.1
Q ss_pred CCchhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 76 GSSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 76 ~~~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
+...+|.+| +|||+++||||||.+.+|++ ||++++|+|||+.+|+.++..+
T Consensus 567 ~~~~~f~~lG~dSl~av~l~~~l~~~~g~~-----l~~~~~~~~pt~~~la~~l~~~ 618 (705)
T PRK06060 567 DQDLAFSELGFDSQMTVTLCKRLAAVTGLR-----LPETVGWDYGSISGLAQYLEAE 618 (705)
T ss_pred CCCCChhhcCchHHHHHHHHHHHHHHhCCC-----CCceeeecCCCHHHHHHHHHHH
Confidence 346789999 99999999999999999999 9999999999999999999887
|
|
| >PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.0025 Score=64.02 Aligned_cols=174 Identities=21% Similarity=0.183 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
..+|..+++..||+.+++.+++|+ ++++-.. .+ ....++..+..|
T Consensus 51 E~~m~~~A~~~al~Ka~l~~~dId--------~~~aGDL-------------------------ln--Q~i~s~f~ar~l 95 (329)
T PF07451_consen 51 ESKMQKEAVELALKKAGLKKEDID--------YLFAGDL-------------------------LN--QIISSSFAARDL 95 (329)
T ss_dssp HHHHHHHHHHHHHHHTT--GGG-S--------EEEEEET-------------------------TC--CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCe--------EEEehhh-------------------------hh--hhHHHHHHHHhc
Confidence 467899999999999999987665 5555321 00 112344555566
Q ss_pred CCCCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcce
Q 008146 315 GWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFV 394 (576)
Q Consensus 315 gl~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v 394 (576)
++ |-+-+..+||+...+|.+|..+|..|-+|.+|++.+....+...-.-|- . .-+.-||-. .-.
T Consensus 96 ~i--Pf~GlygACST~~e~l~laa~~vdgg~a~~vla~tSSH~~tAERQfR~P-----~-----EyG~Qrp~t----Aqw 159 (329)
T PF07451_consen 96 GI--PFLGLYGACSTMMESLALAAMLVDGGFADYVLAATSSHFATAERQFRFP-----T-----EYGGQRPPT----AQW 159 (329)
T ss_dssp T----EEEB--CCCHHHHHHHHHHHHHHTTS-SEEEEEEEE-CCHHHHHT--------G-----GGT----TT------E
T ss_pred CC--CccchhhHHHHHHHHHHHHHHHHhCCCcceEEEEeccccchhhhhccCc-----h-----hccCCCCCc----ccE
Confidence 65 7788899999999999999999999999999998877644332211110 0 112223321 112
Q ss_pred ecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCC--h----HHHHHHHHHHHHHcCCCCCCccEEEecC
Q 008146 395 MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD--G----VGVILCIEKALAHSGVSREDVNYINAHA 468 (576)
Q Consensus 395 ~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~--~----~~~~~ai~~AL~~Agl~~~dId~ve~Hg 468 (576)
.--|+|++||.+.. ..|+ |.+..+..- ......+|+ + ++....|.+-|++.|.+|+|-|.|..-+
T Consensus 160 TVTGaGa~il~~~~------~~p~--It~~T~GkV-vD~G~~D~~nMGaAMAPAA~dTI~~h~~D~g~~p~dYDlIvTGD 230 (329)
T PF07451_consen 160 TVTGAGAAILSKEG------SGPR--ITHATIGKV-VDMGIKDPNNMGAAMAPAAADTIEQHFKDTGRSPDDYDLIVTGD 230 (329)
T ss_dssp E--EEEEEEEESS--------SEE--EEEEE-----B-SS---TT-HHHHHHHHHHHHHHHHHHHCT--GGG-SEEEESS
T ss_pred EEeceEEEEEecCC------CCcE--EEEEEEEEE-EEcCCCCcccchhhHhHHHHHHHHHHHHHhCCChhhcCeEEecc
Confidence 33588999998642 2233 333222110 012223333 2 3445788899999999999999998533
|
This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A. |
| >PF00550 PP-binding: Phosphopantetheine attachment site; InterPro: IPR006163 Phosphopantetheine (or pantetheine 4' phosphate) is the prosthetic group of acyl carrier proteins (ACP) in some multienzyme complexes where it serves as a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups [] | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.00016 Score=56.57 Aligned_cols=47 Identities=13% Similarity=-0.007 Sum_probs=43.2
Q ss_pred CchhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHH
Q 008146 77 SSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRR 128 (576)
Q Consensus 77 ~~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~ 128 (576)
.+..|.++ +||+.++++.+++.+.+|++ +|...+|++||+..+++++
T Consensus 20 ~~~~~~~lG~DSl~~~~l~~~l~~~~g~~-----i~~~~~~~~~ti~~l~~~i 67 (67)
T PF00550_consen 20 PDTDFFDLGLDSLDAIELVSELEEEFGIK-----IPPSDLFEHPTIRDLAEYI 67 (67)
T ss_dssp TTSBTTTTTSSHHHHHHHHHHHHHHHTSS-----TTHHHHCTSSSHHHHHHHH
T ss_pred CCCCHHHhCCchHHHHHHHHHHHHHHcCC-----CCHHHHHcCCCHHHHHhHC
Confidence 35778899 99999999999999999999 9999999999999888764
|
The amino-terminal region of the ACP proteins is well defined and consists of alpha four helices arranged in a right-handed bundle held together by interhelical hydrophobic interactions. The Asp-Ser-Leu (DSL)motif is conserved in all of the ACP sequences, and the 4'-PP prosthetic group is covalently linked via a phosphodiester bond to the serine residue. The DSL sequence is present at the amino terminus of helix II, a domain of the protein referred to as the recognition helix and which is responsible for the interaction of ACPs with the enzymes of type II fatty acid synthesis [].; GO: 0048037 cofactor binding; PDB: 3EJB_E 3EJE_G 1L0I_A 2FHS_C 3EJD_E 2FAE_B 2FAD_B 2FAC_B 2K94_A 1ACP_A .... |
| >PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0057 Score=57.13 Aligned_cols=138 Identities=17% Similarity=0.216 Sum_probs=86.7
Q ss_pred CcEEEEecceecCCC-CCHHHHHHHHHcCCCcceeccCCCCCCCCccccccc-cCCCCCCCCChhhhhcCCHHHHHHHHH
Q 008146 165 KRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEI-KSFSTDGWVAPKLSKRMDKFMLYLLTA 242 (576)
Q Consensus 165 ~~IaItGmg~~~P~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v-~~fd~~~~i~~~~a~~mdp~~rl~l~a 242 (576)
++|-|.+|+..+|.- .+.+++.+. .|.+. .+|.. ++ ++- ..| .++.| ...-|++.|
T Consensus 3 ~~VGI~~i~~y~p~~~v~~~~La~~--~g~d~----~K~~~-gl-----gq~~~av-----~~~~E-----D~vTmA~nA 60 (174)
T PF01154_consen 3 QNVGIDAIEFYIPRYYVDQEELAEA--RGVDP----GKYTI-GL-----GQEKMAV-----PPPDE-----DIVTMAANA 60 (174)
T ss_dssp SSEEEEEEEEE-ESEEEEHHHHHHH--TTS-T----CHHHT-TT-------SEEEE-------TTS------HHHHHHHH
T ss_pred ccccEeEEEEecCceEecHHHHHHH--hCCCH----HHhhh-hc-----CeeEEEe-----CCCcc-----cHHHHHHHH
Confidence 458899999999998 677776432 23221 01110 00 000 001 11111 235689999
Q ss_pred HHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCCCCc---
Q 008146 243 GKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGP--- 319 (576)
Q Consensus 243 a~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp--- 319 (576)
++.+|++.+++++.|+ -+++|+.++-. ..-..+..+...||+.|.
T Consensus 61 a~~ll~~~~id~~~Ig-------~l~vgTES~vD-------------------------~sKs~~t~v~~ll~~s~~~~~ 108 (174)
T PF01154_consen 61 AKPLLDRYNIDPDDIG-------RLIVGTESGVD-------------------------KSKSISTYVHQLLGLSGNPDC 108 (174)
T ss_dssp HHTTHHHHT-HHHHEE-------EEEEE-SS-SB-------------------------SSS-HHHHHHHHTTTTT-SSS
T ss_pred HHHHHHHcCCCHHHcc-------EEEEecccccc-------------------------ccccHHHHHHHHhCcCCCCce
Confidence 9999999888887554 37788754211 111246778888998553
Q ss_pred -cccccCCCchHHHHHHHHHHHHHcCCCC--EEEEecccc
Q 008146 320 -NYSISTACATSNFCILNAANHIIRGEAN--VMLCGGSDA 356 (576)
Q Consensus 320 -~~tv~taCaSgl~AL~~A~~~I~~G~~d--~aLvgGvd~ 356 (576)
.+-+-.+|-+|..||..|+.+|.++..| .+||++.|.
T Consensus 109 ~~~e~k~ACygGTaAL~~a~~~v~s~~~~g~~aLVVasDi 148 (174)
T PF01154_consen 109 RGVEMKQACYGGTAALQNAVNWVASSPWDGRKALVVASDI 148 (174)
T ss_dssp EEEEEESGGGHHHHHHHHHHHHHCSTTSTTEEEEEEEEEE
T ss_pred eeeehhhhhHHHHHHHHHHHHHHhcCCCCCCeEEEEeccc
Confidence 3557899999999999999999998765 999999997
|
Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A .... |
| >PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.013 Score=48.77 Aligned_cols=89 Identities=18% Similarity=0.233 Sum_probs=54.9
Q ss_pred HHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCC
Q 008146 451 LAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNIN 530 (576)
Q Consensus 451 L~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~ 530 (576)
|+++|++++|||++..|-...+. .+.+.+.++-..+...... ..+||+.+|+-.+.|. ..+++|.+.
T Consensus 1 L~~~g~~~~did~~i~hq~~~~~-----~~~~~~~lgi~~~~~~~~~-~~~Gn~~sa~~~~~L~---~~~~~g~~~---- 67 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQASKKI-----LDSIAKRLGIPPERFPDNL-AEYGNTGSASIPINLA---DALEEGRIK---- 67 (90)
T ss_dssp HHHTT--GGGESEEEE-SSSHHH-----HHHHHHHHTS-GGGBE-TH-HHH-B-GGGHHHHHHH---HHHHTTSSC----
T ss_pred CccccCCHHHCCEEEeCCCCHHH-----HHHHHHHcCCcHHHHHHHH-hccCcchhhhHHHHHH---HHHHcCCCC----
Confidence 68999999999999999766542 3345566664422222222 6679999888666654 455554431
Q ss_pred CCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEe
Q 008146 531 LENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573 (576)
Q Consensus 531 ~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~ 573 (576)
+-+.+++-++|.|.+.++++++
T Consensus 68 ---------------------~Gd~vl~~~~G~G~~~~~~~~~ 89 (90)
T PF08541_consen 68 ---------------------PGDRVLLVGFGAGFSWGAAVLR 89 (90)
T ss_dssp ---------------------TTEEEEEEEEETTTEEEEEEEE
T ss_pred ---------------------CCCEEEEEEEEhhheeEEEEEE
Confidence 2355677799999999998886
|
3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B .... |
| >PRK00982 acpP acyl carrier protein; Provisional | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.0057 Score=49.50 Aligned_cols=49 Identities=8% Similarity=-0.109 Sum_probs=45.1
Q ss_pred chhh-hHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 78 SHSI-QSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 78 ~~~~-~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
...| .++ +|||..+|+..++.+.+|++ +|...+++++|+..++.++...
T Consensus 26 d~~l~~dlglDSl~~~~li~~le~~f~i~-----i~~~~~~~~~ti~~l~~~l~~~ 76 (78)
T PRK00982 26 EASFVDDLGADSLDTVELVMALEEEFGIE-----IPDEDAEKIKTVGDAVDYIEKH 76 (78)
T ss_pred CcchHhhcCCCHHHHHHHHHHHHHHHCCC-----cCHHHHHHcCcHHHHHHHHHHh
Confidence 5678 799 99999999999999999999 9999999999999999888664
|
|
| >smart00823 PKS_PP Phosphopantetheine attachment site | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.008 Score=48.28 Aligned_cols=50 Identities=12% Similarity=0.062 Sum_probs=44.7
Q ss_pred CchhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 77 SSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 77 ~~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
....|.++ +||+..+++++++...+|+. +|...+|++||...++.++..+
T Consensus 35 ~~~~l~~~g~dSl~~~~~~~~l~~~~~~~-----i~~~~~~~~~t~~~l~~~i~~~ 85 (86)
T smart00823 35 PDRPFRDLGLDSLTAVELRNRLEAATGLR-----LPATLVFDHPTPAALAEHLAAE 85 (86)
T ss_pred CCCCHHHcCchHHHHHHHHHHHHHHHCCC-----CChHHHHcCCCHHHHHHHHHHh
Confidence 35678899 99999999999999999999 9999999999999888877654
|
Phosphopantetheine (or pantetheine 4' phosphate) is the prosthetic group of acyl carrier proteins (ACP) in some multienzyme complexes where it serves as a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups PUBMED:5321311. |
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=92.52 E-value=0.047 Score=68.14 Aligned_cols=51 Identities=16% Similarity=0.021 Sum_probs=47.1
Q ss_pred CCchhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 76 GSSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 76 ~~~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
+....|-+| +|||.+++|+++|++.+|++ ||.+.+|++||+.++++++...
T Consensus 869 ~~~~~ff~lGgdSL~a~~l~~~l~~~~~~~-----l~~~~i~~~~ti~~la~~l~~~ 920 (1389)
T TIGR03443 869 SPDDSFFDLGGHSILATRMIFELRKKLNVE-----LPLGLIFKSPTIKGFAKEVDRL 920 (1389)
T ss_pred CcCcchhhcCccHHHHHHHHHHHHHHhCCC-----cCHHHHhcCCCHHHHHHHHHhh
Confidence 456789999 99999999999999999999 9999999999999999988754
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >CHL00124 acpP acyl carrier protein; Validated | Back alignment and domain information |
|---|
Probab=92.31 E-value=0.059 Score=44.00 Aligned_cols=50 Identities=6% Similarity=-0.166 Sum_probs=45.8
Q ss_pred CchhhhH-h-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 77 SSHSIQS-L-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 77 ~~~~~~~-~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
....|.+ | +||+..+|+.-+|...+|++ +|...+++.+|+..++.++...
T Consensus 27 ~d~~l~~dlg~DSl~~~eli~~le~~f~i~-----i~~~~~~~~~tv~~l~~~i~~~ 78 (82)
T CHL00124 27 LDANFTRDLGADSLDVVELVMAIEEKFDIE-----IPDEDAEKISTLQEAVDFISQK 78 (82)
T ss_pred CCcchhhhcCCcHHHHHHHHHHHHHHHCCc-----cCHHHHHHcCCHHHHHHHHHHH
Confidence 3567877 8 99999999999999999999 9999999999999999998876
|
|
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=89.23 E-value=0.14 Score=63.29 Aligned_cols=51 Identities=6% Similarity=-0.040 Sum_probs=47.2
Q ss_pred CCchhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 76 GSSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 76 ~~~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
+....|-+| .|||++++|.++|++.+|.. +|...+|++||+.++++++...
T Consensus 997 ~~~~~ff~lGg~Sl~a~~l~~~l~~~~~~~-----l~~~~~~~~pti~~la~~l~~~ 1048 (1296)
T PRK10252 997 DADADFFALGGHSLLAMKLAAQLSRQFARQ-----VTPGQVMVASTVAKLATLLDAE 1048 (1296)
T ss_pred CCCcCHHHcCCChHHHHHHHHHHHHHhCCC-----CCHHHHhcCCCHHHHHHHHhcc
Confidence 456789999 99999999999999999999 9999999999999999998765
|
|
| >PRK09184 acyl carrier protein; Provisional | Back alignment and domain information |
|---|
Probab=88.80 E-value=0.18 Score=41.95 Aligned_cols=49 Identities=8% Similarity=-0.211 Sum_probs=41.9
Q ss_pred chhh-h-Hh-hhcccccccchhhhhhhcCccccCCCC---cccccCCCChhHHHHHHHHH
Q 008146 78 SHSI-Q-SL-MASCLPFEPCNEYYSSVSSLGFFGDNG---FSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 78 ~~~~-~-~~-~dsl~avel~n~l~~~~g~~~~~~~l~---~t~~Fd~pt~~al~~~~~~~ 131 (576)
...| . +| +|||-+|||.-.+...+|++ +| ...++.++|...++.|....
T Consensus 32 d~~l~~~dLglDSld~velv~~lE~~fgi~-----i~~~~~~~~~~~~TV~~l~~~I~~~ 86 (89)
T PRK09184 32 DAPLYGEGLGLDSIDILEIALVISKRYGFQ-----LRSDNPDNQRIFASLRALAAYVAAH 86 (89)
T ss_pred CcccccccCCCcHHHHHHHHHHHHHHHCCc-----CCCcchhhhhccCCHHHHHHHHHHh
Confidence 4564 4 69 99999999999999999999 87 45578899999999998765
|
|
| >PRK12449 acyl carrier protein; Provisional | Back alignment and domain information |
|---|
Probab=88.44 E-value=0.22 Score=40.39 Aligned_cols=49 Identities=10% Similarity=-0.105 Sum_probs=45.0
Q ss_pred chhh-hHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 78 SHSI-QSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 78 ~~~~-~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
...| .+| +||+..++|..+|...+|+. +|...+++++|...++.++..+
T Consensus 28 ~~~l~~dlg~DSl~~~~li~~lE~~f~i~-----i~~~~~~~~~ti~~l~~~l~~~ 78 (80)
T PRK12449 28 QTHLKDDLAVDSIELVEFIINVEDEFHIA-----IPDEDVEDMVSMGDLLDYLVQR 78 (80)
T ss_pred CCcHHHHcCCcHHHHHHHHHHHHHHhCCC-----CCHHHHHhCCCHHHHHHHHHHh
Confidence 5677 688 99999999999999999999 9999999999999999988765
|
|
| >PRK12467 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=86.19 E-value=0.66 Score=63.87 Aligned_cols=51 Identities=10% Similarity=0.051 Sum_probs=47.4
Q ss_pred CCchhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 76 GSSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 76 ~~~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
+....|-+| -|||++++|.+++++.+|+. ++...+|+|||+.++++++...
T Consensus 1049 ~~~d~Ff~lGgdSl~a~~l~~~~~~~~g~~-----l~~~~lf~~~t~~~la~~~~~~ 1100 (3956)
T PRK12467 1049 GLTDNFFELGGHSLLATQVISRVRQRLGIQ-----VPLRTLFEHQTLAGFAQAVAAQ 1100 (3956)
T ss_pred CCCCCchhccCccHHHHHHHHHHHHHhCCC-----cchHHhhccchHHHHHHHhhhh
Confidence 456789999 99999999999999999999 9999999999999999988765
|
|
| >TIGR00517 acyl_carrier acyl carrier protein | Back alignment and domain information |
|---|
Probab=85.44 E-value=0.36 Score=38.80 Aligned_cols=49 Identities=8% Similarity=-0.128 Sum_probs=43.3
Q ss_pred chhh-hHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 78 SHSI-QSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 78 ~~~~-~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
...| .+| +|||..|||.-.+...+|++ +|...++..+|+..+..++..+
T Consensus 26 ~~~l~~dlglDSl~~veli~~lE~~f~i~-----i~~~~~~~~~tv~~l~~~i~~~ 76 (77)
T TIGR00517 26 DASFVEDLGADSLDTVELVMALEEEFDIE-----IPDEEAEKIATVGDAVDYIEEN 76 (77)
T ss_pred CcchhhhcCCcHHHHHHHHHHHHHHHCCC-----CCHHHHHHCCcHHHHHHHHHhc
Confidence 4556 679 99999999999999999999 9999999999999998887653
|
S (Ser) at position 37 in the seed alignment, in the motif DSLD, is the phosphopantetheine attachment site. |
| >PRK12316 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=85.21 E-value=0.7 Score=65.05 Aligned_cols=51 Identities=12% Similarity=0.014 Sum_probs=46.5
Q ss_pred CCchhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 76 GSSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 76 ~~~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
+....|-+| .|||+|++|++++++.+|+. ++...+|++||...++..+...
T Consensus 2535 ~~~d~Ff~lGgdSl~a~~l~~~~~~~~g~~-----l~~~~~f~~~ti~~la~~l~~~ 2586 (5163)
T PRK12316 2535 GLDDHFFELGGHSLLATQVVSRVRQDLGLE-----VPLRILFERPTLAAFAASLESG 2586 (5163)
T ss_pred CCCCchhhhcchHHHHHHHHHHHHHHhCCC-----cCHHHHhhCccHHHHhhhhhhh
Confidence 446789999 99999999999999999999 9999999999999999887654
|
|
| >PRK05883 acyl carrier protein; Validated | Back alignment and domain information |
|---|
Probab=84.58 E-value=0.4 Score=40.14 Aligned_cols=49 Identities=2% Similarity=-0.090 Sum_probs=44.3
Q ss_pred chhh-hHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 78 SHSI-QSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 78 ~~~~-~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
...| .+| +|||.-+++-..|...+|++ +|...+++++|+..+..++..+
T Consensus 37 d~~l~~dlg~DSL~~v~lv~~lE~~fgI~-----i~~ee~~~~~TV~dl~~~v~~~ 87 (91)
T PRK05883 37 DARLVDDVGLDSVAFAVGMVAIEERLGVA-----LSEEDLLSCDTVGDLEAAIAAK 87 (91)
T ss_pred CCchhhccCCChHHHHHHHHHHHHHHCCC-----cCHHHHHhCCCHHHHHHHHHHH
Confidence 3455 678 99999999999999999999 9999999999999999998776
|
|
| >PRK07081 acyl carrier protein; Provisional | Back alignment and domain information |
|---|
Probab=84.31 E-value=0.52 Score=38.65 Aligned_cols=49 Identities=4% Similarity=-0.171 Sum_probs=43.9
Q ss_pred chhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccC--CCChhHHHHHHHHH
Q 008146 78 SHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFG--SNNSTATLNRRQRR 131 (576)
Q Consensus 78 ~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd--~pt~~al~~~~~~~ 131 (576)
...|.+| +||+..++|.-.|...+|++ +|...+.. ++|+..++.+....
T Consensus 25 d~~l~dlGlDSl~~v~li~~lE~~f~I~-----i~~~~~~~~~~~tv~~l~~~V~~~ 76 (83)
T PRK07081 25 DADLYEAGLSSLATVQLMLAIEDAFDIE-----IPDEMLNRKLFASIDALAGAVTQL 76 (83)
T ss_pred CCCHhhcCCCHHHHHHHHHHHHHHhCCc-----CCHHHcCHHHhccHHHHHHHHHHH
Confidence 4578899 99999999999999999999 99988764 89999999888876
|
|
| >PRK05350 acyl carrier protein; Provisional | Back alignment and domain information |
|---|
Probab=83.27 E-value=0.48 Score=38.70 Aligned_cols=46 Identities=9% Similarity=0.000 Sum_probs=42.9
Q ss_pred hhHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 81 IQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 81 ~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
|.+| +|||..+|+.-.|...+|++ +|...+++.+|...+..+....
T Consensus 33 ~~dlg~DSld~veli~~lE~~fgI~-----i~~~~~~~~~Tv~dlv~~v~~~ 79 (82)
T PRK05350 33 YEDLDLDSIDAVDLVVHLQKLTGKK-----IKPEEFKSVRTVQDVVDAVERL 79 (82)
T ss_pred hhhcCCCHHHHHHHHHHHHHHHCCc-----cCHHHHhhcCcHHHHHHHHHHH
Confidence 6899 99999999999999999999 9999999999999999888765
|
|
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=82.71 E-value=5.1 Score=43.47 Aligned_cols=100 Identities=12% Similarity=0.048 Sum_probs=58.1
Q ss_pred EEEEEEEEecCCCCCCCC--CCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCc-HHHHHHHHHHHcCCCCcccc
Q 008146 419 AEFRGGSFTSDAYHMTEP--HPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGD-IKEYQALIHCFGQNRGLRVN 495 (576)
Q Consensus 419 a~I~g~~~~~dg~~~~~~--~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD-~~E~~Al~~~f~~~~~~~v~ 495 (576)
+.|.|.+.+--+.+.... .....-..++++++|+++|++++|||.|... +.++.++ ......+....|-..+.+..
T Consensus 5 v~Ivg~~rTp~g~~~g~~~~~~~~~L~~~A~~~Al~dAgl~~~dID~vi~g-~~~~~~~~~~~a~~v~~~lGl~~~~p~~ 83 (426)
T PRK08170 5 VYIVDGARTPFLKARGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILG-CAMPSPDEANIARVVALRLGCGEKVPAW 83 (426)
T ss_pred EEEEecCCCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-eccCCCCcChHHHHHHHHhCcCCCceee
Confidence 346676655444432211 1224455789999999999999999987643 2222222 12122233344432112222
Q ss_pred cccccccccccchhHHHHHHHHHHHHcCC
Q 008146 496 STKSMIGHLLGAAGAVEAIAVVQAIRTGW 524 (576)
Q Consensus 496 s~K~~iGH~~gAsG~~~li~~~l~L~~g~ 524 (576)
.+ +..+++|+..+..+...++.|.
T Consensus 84 ~v-----~~~CaSg~~al~~A~~~I~sG~ 107 (426)
T PRK08170 84 TV-----QRNCASGMQALDSAAANIALGR 107 (426)
T ss_pred ec-----cchhhHHHHHHHHHHHHHHCCC
Confidence 21 2348899999999999999875
|
|
| >PRK12467 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=82.60 E-value=0.48 Score=65.18 Aligned_cols=50 Identities=10% Similarity=0.059 Sum_probs=46.0
Q ss_pred CCchhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHH
Q 008146 76 GSSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQR 130 (576)
Q Consensus 76 ~~~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~ 130 (576)
+....|-+| .|||+|++|..|+++.+|+. +|...+|++||+.+|+.++..
T Consensus 3624 ~~~d~Ff~lGgdSl~a~~l~~~l~~~~g~~-----l~~~~lf~~pti~~la~~~~~ 3674 (3956)
T PRK12467 3624 GVTDNFFELGGDSLLALQVLSRIRQSLGLK-----LSLRDLMSAPTIAELAGYSPL 3674 (3956)
T ss_pred CCCcchhcccchHHHHHHHHHHHHHHhCCC-----CCHHHHHhCCCHHHHHHHHhh
Confidence 456789999 99999999999999999999 999999999999999988754
|
|
| >PRK05691 peptide synthase; Validated | Back alignment and domain information |
|---|
Probab=82.52 E-value=1.1 Score=62.29 Aligned_cols=51 Identities=10% Similarity=0.003 Sum_probs=46.9
Q ss_pred CCchhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 76 GSSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 76 ~~~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
+....|-+| .|||+|++|++|++..+|+. ++...+|++||+.++++++...
T Consensus 605 ~~~~~ff~lGgdSL~a~~l~~~l~~~~g~~-----l~v~~i~~~~ti~~la~~l~~~ 656 (4334)
T PRK05691 605 AADDHFFLLGGNSIAATQVVARLRDELGID-----LNLRQLFEAPTLAAFSAAVARQ 656 (4334)
T ss_pred CcCCchhhcccchHHHHHHHHHHHHHhCCc-----CchhhhhcccchHHHHHHHHHh
Confidence 456789999 99999999999999999999 9999999999999999888765
|
|
| >PRK12578 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=80.64 E-value=5.9 Score=42.28 Aligned_cols=97 Identities=14% Similarity=0.133 Sum_probs=58.4
Q ss_pred EEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCc-HHHHHHHHHHHcCCCCccccccc
Q 008146 420 EFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGD-IKEYQALIHCFGQNRGLRVNSTK 498 (576)
Q Consensus 420 ~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD-~~E~~Al~~~f~~~~~~~v~s~K 498 (576)
.|.|++.+.-+++.. .....-..++++++|+++||+++|||.+... +.++.++ ......+...+|-.....
T Consensus 4 ~IvG~g~t~~~~~~~--~~~~eLa~~A~~~AL~dAgi~~~dID~vi~g-~~~~~~~~~~~a~~v~~~lGl~~~~~----- 75 (385)
T PRK12578 4 AVIGVGNSKFGRRDD--VSVQELAWESIKEALNDAGVSQTDIELVVVG-STAYRGIELYPAPIVAEYSGLTGKVP----- 75 (385)
T ss_pred EEEeecccceeecCC--CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-ecccccccCChHHHHHHHhCCCCCCe-----
Confidence 477777654443321 1123445789999999999999999998753 3322111 112233444444321111
Q ss_pred ccccccccchhHHHHHHHHHHHHcCCC
Q 008146 499 SMIGHLLGAAGAVEAIAVVQAIRTGWI 525 (576)
Q Consensus 499 ~~iGH~~gAsG~~~li~~~l~L~~g~i 525 (576)
..=+..+++|+..+..+...++.|..
T Consensus 76 -~~v~~~casg~~al~~A~~~I~sG~~ 101 (385)
T PRK12578 76 -LRVEAMCATGLAASLTAYTAVASGLV 101 (385)
T ss_pred -eEEeccCHHHHHHHHHHHHHHHCCCC
Confidence 11145688899999999999998853
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 576 | ||||
| 1j3n_A | 408 | Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protei | 1e-81 | ||
| 1e5m_A | 416 | Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kas | 4e-75 | ||
| 2gqd_A | 437 | The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii | 1e-68 | ||
| 2gfw_A | 427 | Structure Of Wild Type E. Coli Fabf (Kasii) Length | 4e-67 | ||
| 1b3n_A | 412 | Beta-Ketoacyl Carrier Protein Synthase As A Drug Ta | 4e-67 | ||
| 1ox0_A | 430 | The Crystal Structure Of Beta-Ketoacyl-[acyl Carrie | 1e-66 | ||
| 2gfy_A | 427 | Structure Of E. Coli Fabf(K335a) Mutant With Covale | 2e-66 | ||
| 3hnz_A | 427 | Structure Of E. Coli Fabf(C163a) In Complex With Pl | 4e-66 | ||
| 2gfv_A | 427 | Structure Of E. Coli Fabf (Kasii) C163q Mutant Leng | 6e-66 | ||
| 2rjt_A | 428 | Crystal Structure Analysis Of A Surface Entropy Red | 1e-65 | ||
| 2alm_A | 431 | Crystal Structure Analysis Of A Mutant Beta-Ketoacy | 3e-65 | ||
| 3o04_A | 413 | Crystal Structure Of The Beta-Keto-Acyl Carrier Pro | 2e-63 | ||
| 4ddo_A | 451 | Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei | 3e-59 | ||
| 4f32_A | 451 | Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei | 3e-58 | ||
| 2iwy_A | 438 | Human Mitochondrial Beta-ketoacyl Acp Synthase Leng | 3e-56 | ||
| 3kzu_A | 428 | Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei | 3e-55 | ||
| 2c9h_A | 444 | Structure Of Mitochondrial Beta-Ketoacyl Synthase L | 6e-55 | ||
| 3e60_A | 424 | Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei | 2e-53 | ||
| 1w0i_A | 431 | Arabidopsis Thaliana Mitochondrial Kas Length = 431 | 3e-53 | ||
| 1dd8_A | 406 | Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Pr | 2e-45 | ||
| 1fj4_A | 406 | The Structure Of Beta-Ketoacyl-[acyl Carrier Protei | 8e-45 | ||
| 2byw_A | 418 | Structure Of Escherichia Coli Beta-Ketoacyl (Acyl C | 1e-44 | ||
| 1h4f_A | 406 | E. Coli Beta-Ketoacyl [acyl Carrier Protein] Syntha | 2e-44 | ||
| 2byz_A | 418 | Structure Of E. Coli Kas I H298q Mutant In Complex | 6e-44 | ||
| 2byy_A | 418 | E. Coli Kas I H298e Mutation Length = 418 | 8e-44 | ||
| 3lrf_A | 428 | Crystal Structure Of Beta-Ketoacyl Synthase From Br | 3e-43 | ||
| 3u0f_A | 411 | The Structure Of Beta-Ketoacyl Synthase From Brucel | 3e-43 | ||
| 2wgd_A | 416 | Crystal Structure Of Kasa Of Mycobacterium Tubercul | 1e-42 | ||
| 1tqy_A | 424 | The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Le | 7e-42 | ||
| 2wgf_A | 416 | Crystal Structure Of Mycobacterium Tuberculosis C17 | 2e-41 | ||
| 1ek4_A | 418 | Beta-Ketoacyl [acyl Carrier Protein] Synthase I In | 4e-40 | ||
| 1f91_A | 406 | Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In | 4e-40 | ||
| 2vb7_C | 406 | Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Ap | 1e-39 | ||
| 2gp6_A | 434 | X-Ray Crystal Structure Of Mycobacterium Tuberculos | 6e-38 | ||
| 3oyt_A | 410 | 1.84 Angstrom Resolution Crystal Structure Of 3-Oxo | 1e-37 | ||
| 4ewg_A | 412 | Crystal Structure Of A Beta-Ketoacyl Synthase From | 6e-35 | ||
| 1tqy_B | 415 | The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Le | 3e-17 | ||
| 2qo3_A | 915 | Crystal Structure Of [ks3][at3] Didomain From Modul | 7e-16 | ||
| 2hg4_A | 917 | Structure Of The Ketosynthase-acyltransferase Didom | 1e-13 | ||
| 3hhd_A | 965 | Structure Of The Human Fatty Acid Synthase Ks-Mat D | 3e-12 | ||
| 2vz8_A | 2512 | Crystal Structure Of Mammalian Fatty Acid Synthase | 7e-12 | ||
| 3zen_D | 3089 | Cryo-em Structure Of The Mycobacterial Fatty Acid S | 1e-11 | ||
| 2uv9_A | 1878 | Crystal Structure Of Fatty Acid Synthase From Therm | 9e-06 |
| >pdb|1J3N|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protein) Synthase Ii From Thermus Thermophilus Hb8 Length = 408 | Back alignment and structure |
|
| >pdb|1E5M|A Chain A, Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kasii) From Synechocystis Sp Length = 416 | Back alignment and structure |
|
| >pdb|2GQD|A Chain A, The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii (Fabf) From Staphylococcus Aureus Length = 437 | Back alignment and structure |
|
| >pdb|2GFW|A Chain A, Structure Of Wild Type E. Coli Fabf (Kasii) Length = 427 | Back alignment and structure |
|
| >pdb|1B3N|A Chain A, Beta-Ketoacyl Carrier Protein Synthase As A Drug Target, Implications From The Crystal Structure Of A Complex With The Inhibitor Cerulenin. Length = 412 | Back alignment and structure |
|
| >pdb|1OX0|A Chain A, The Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 430 | Back alignment and structure |
|
| >pdb|2GFY|A Chain A, Structure Of E. Coli Fabf(K335a) Mutant With Covalently Linked Dodecanoic Acid Length = 427 | Back alignment and structure |
|
| >pdb|3HNZ|A Chain A, Structure Of E. Coli Fabf(C163a) In Complex With Platensimycin Length = 427 | Back alignment and structure |
|
| >pdb|2GFV|A Chain A, Structure Of E. Coli Fabf (Kasii) C163q Mutant Length = 427 | Back alignment and structure |
|
| >pdb|2RJT|A Chain A, Crystal Structure Analysis Of A Surface Entropy Reduction Mutant Of S. Pneumoniae Fabf Length = 428 | Back alignment and structure |
|
| >pdb|2ALM|A Chain A, Crystal Structure Analysis Of A Mutant Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 431 | Back alignment and structure |
|
| >pdb|3O04|A Chain A, Crystal Structure Of The Beta-Keto-Acyl Carrier Protein Synthase Ii (Lmo2201) From Listeria Monocytogenes Length = 413 | Back alignment and structure |
|
| >pdb|4DDO|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis Length = 451 | Back alignment and structure |
|
| >pdb|4F32|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis In Complex With Platencin Length = 451 | Back alignment and structure |
|
| >pdb|2IWY|A Chain A, Human Mitochondrial Beta-ketoacyl Acp Synthase Length = 438 | Back alignment and structure |
|
| >pdb|3KZU|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Brucella Melitensis Length = 428 | Back alignment and structure |
|
| >pdb|2C9H|A Chain A, Structure Of Mitochondrial Beta-Ketoacyl Synthase Length = 444 | Back alignment and structure |
|
| >pdb|3E60|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Bartonella Henselae Length = 424 | Back alignment and structure |
|
| >pdb|1W0I|A Chain A, Arabidopsis Thaliana Mitochondrial Kas Length = 431 | Back alignment and structure |
|
| >pdb|1DD8|A Chain A, Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I From Escherichia Coli Length = 406 | Back alignment and structure |
|
| >pdb|1FJ4|A Chain A, The Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I In Complex With Thiolactomycin, Implications For Drug Design Length = 406 | Back alignment and structure |
|
| >pdb|2BYW|A Chain A, Structure Of Escherichia Coli Beta-Ketoacyl (Acyl Carrier Protein) Synthase I Lys328ala Mutant Length = 418 | Back alignment and structure |
|
| >pdb|1H4F|A Chain A, E. Coli Beta-Ketoacyl [acyl Carrier Protein] Synthase I K328r Length = 406 | Back alignment and structure |
|
| >pdb|2BYZ|A Chain A, Structure Of E. Coli Kas I H298q Mutant In Complex With C12 Fatty Acid Length = 418 | Back alignment and structure |
|
| >pdb|2BYY|A Chain A, E. Coli Kas I H298e Mutation Length = 418 | Back alignment and structure |
|
| >pdb|3LRF|A Chain A, Crystal Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Length = 428 | Back alignment and structure |
|
| >pdb|3U0F|A Chain A, The Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Bound To The Fragment 7-Hydroxycoumarin Length = 411 | Back alignment and structure |
|
| >pdb|2WGD|A Chain A, Crystal Structure Of Kasa Of Mycobacterium Tuberculosis Length = 416 | Back alignment and structure |
|
| >pdb|1TQY|A Chain A, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Length = 424 | Back alignment and structure |
|
| >pdb|2WGF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa Variant Length = 416 | Back alignment and structure |
|
| >pdb|1EK4|A Chain A, Beta-Ketoacyl [acyl Carrier Protein] Synthase I In Complex With Dodecanoic Acid To 1.85 Resolution Length = 418 | Back alignment and structure |
|
| >pdb|1F91|A Chain A, Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In Complex With C10 Fatty Acid Substrate Length = 406 | Back alignment and structure |
|
| >pdb|2VB7|C Chain C, Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Apo Structure After Soak In Peg Solution Length = 406 | Back alignment and structure |
|
| >pdb|2GP6|A Chain A, X-Ray Crystal Structure Of Mycobacterium Tuberculosis Beta- Ketoacyl Acyl Carrier Protein Synthase Ii (Mtkasb) Length = 434 | Back alignment and structure |
|
| >pdb|3OYT|A Chain A, 1.84 Angstrom Resolution Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase I (Fabb) From Yersinia Pestis Co92 Length = 410 | Back alignment and structure |
|
| >pdb|4EWG|A Chain A, Crystal Structure Of A Beta-Ketoacyl Synthase From Burkholderia Phymatum Stm815 Length = 412 | Back alignment and structure |
|
| >pdb|1TQY|B Chain B, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Length = 415 | Back alignment and structure |
|
| >pdb|2QO3|A Chain A, Crystal Structure Of [ks3][at3] Didomain From Module 3 Of 6- Deoxyerthronolide B Synthase Length = 915 | Back alignment and structure |
|
| >pdb|2HG4|A Chain A, Structure Of The Ketosynthase-acyltransferase Didomain Of Module 5 From Debs. Length = 917 | Back alignment and structure |
|
| >pdb|3HHD|A Chain A, Structure Of The Human Fatty Acid Synthase Ks-Mat Didomain As A Framework For Inhibitor Design. Length = 965 | Back alignment and structure |
|
| >pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase Length = 2512 | Back alignment and structure |
|
| >pdb|3ZEN|D Chain D, Cryo-em Structure Of The Mycobacterial Fatty Acid Synthase Length = 3089 | Back alignment and structure |
|
| >pdb|2UV9|A Chain A, Crystal Structure Of Fatty Acid Synthase From Thermomyces Lanuginosus At 3.1 Angstrom Resolution. This File Contains The Alpha Subunits Of The Fatty Acid Synthase. The Entire Crystal Structure Consists Of One Heterododecameric Fatty Acid Synthase And Is Described In Remark 400 Length = 1878 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A Length = 430 | Back alignment and structure |
|---|
Score = 583 bits (1506), Expect = 0.0
Identities = 181/429 (42%), Positives = 255/429 (59%), Gaps = 8/429 (1%)
Query: 149 QPDEEVTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFP 208
+ HMK RVVVTG G+ SP+G+ P+ F+N+L G GI I FD + F
Sbjct: 7 HHHSSGLVPRGSHMKLNRVVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGITKFDHSDFD 66
Query: 209 TKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVL 268
AAEI+ F D + K + R D + LY L A ++A+ + + L++ + GV+
Sbjct: 67 VHNAAEIQDFPFDKYFVKKDTNRFDNYSLYALYAAQEAVNHANLD---VEALNRDRFGVI 123
Query: 269 IGSGLGGMKVFYDAIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTAC 327
+ SG+GG+K D + L K++ P +P A NM S +AM G G SI+TAC
Sbjct: 124 VASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSINTAC 183
Query: 328 ATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWD 387
++SN I +A I G +VML GG++A++ P + GF A ALS DPT+AS P+D
Sbjct: 184 SSSNDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALS-TTEDPTRASIPFD 242
Query: 388 INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCI 447
+R+GFVMGEG+G+L+LE LEHA+KRGA I AE G T DAYHMT PHP+G G I I
Sbjct: 243 KDRNGFVMGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAI 302
Query: 448 EKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGA 507
+ AL + +S E V Y+NAH TSTPA + E A++ G+ + V+STKS GHLLGA
Sbjct: 303 KLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLGKE--VPVSSTKSFTGHLLGA 360
Query: 508 AGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHN 567
AGAVEAI ++A+R ++ ++ NV+ G E+ E+ A+SN+FGFGGHN
Sbjct: 361 AGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANVVYGQGLEK-EIPYAISNTFGFGGHN 419
Query: 568 SSIIFSPYK 576
+ + F ++
Sbjct: 420 AVLAFKRWE 428
|
| >1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 Length = 416 | Back alignment and structure |
|---|
Score = 576 bits (1487), Expect = 0.0
Identities = 188/417 (45%), Positives = 259/417 (62%), Gaps = 6/417 (1%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 221
+++KRVVVTG+G ++P+G+ ++ L+EG +GI I FD + + E+K F
Sbjct: 4 LEKKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDAT 63
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 281
++ K +KRMD+F + + A ++A+ D + +NEL+ + GVLIG+G+GG+KV D
Sbjct: 64 QFLDRKEAKRMDRFCHFAVCASQQAINDAKLV---INELNADEIGVLIGTGIGGLKVLED 120
Query: 282 AIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 340
L + +PF +P NM S + A++LG GPN TACA + I +A
Sbjct: 121 QQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFRL 180
Query: 341 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 400
+ G A M+CGG++AA+ P+ GF + RALS RN+DP ASRP+D +RDGFVMGEG+G
Sbjct: 181 VQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRDGFVMGEGSG 240
Query: 401 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 460
+L+LEELE A RGAKIY E G + T DAYH+T P PDG G I AL SG+ E
Sbjct: 241 ILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEM 300
Query: 461 VNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQA 519
V+YINAH TSTPA D+ E +A+ G + + V+STKSM GHLLG +G +EA+A V A
Sbjct: 301 VSYINAHGTSTPANDVTETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMA 360
Query: 520 IRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 576
I + P INLENPD D + V + L V ALSNSFGFGGHN ++ F Y+
Sbjct: 361 IAEDKVPPTINLENPDPECDLD-YVPGQSRALIVDVALSNSFGFGGHNVTLAFKKYQ 416
|
| >3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A Length = 427 | Back alignment and structure |
|---|
Score = 574 bits (1482), Expect = 0.0
Identities = 186/413 (45%), Positives = 266/413 (64%), Gaps = 5/413 (1%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 221
+ ++RVVVTG+G++SP+G+ + + LL G SGIS I+ FD +++ TK A +K F+ +
Sbjct: 15 VSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCE 74
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 281
++ K ++MD F+ Y + AG +A+ D G+ + E + ++ G IGSG+GG+ + +
Sbjct: 75 DIISRKEQRKMDAFIQYGIVAGVQAMQDSGLE---ITEENATRIGAAIGSGIGGLGLIEE 131
Query: 282 AIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 340
+L +K++PF VP NM + L + G GP+ SI+TA + I +AA
Sbjct: 132 NHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATAATSGVHNIGHAARI 191
Query: 341 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 400
I G+A+VM+ GG++ A P+G+GGF A RALS RN++P ASRPWD RDGFV+G+GAG
Sbjct: 192 IAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAG 251
Query: 401 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 460
+L+LEE EHAKKRGAKIYAE G +SDAYHMT P +G G L + AL +G+
Sbjct: 252 MLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQ 311
Query: 461 VNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQA 519
+ Y+NAH TSTPAGD E QA+ FG+ + V+STKSM GHLLGAAGAVE+I + A
Sbjct: 312 IGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILA 371
Query: 520 IRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIF 572
+R + P INL+NPD D + + ++ ++ L NSFGFGG N S+IF
Sbjct: 372 LRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIF 424
|
| >4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* Length = 451 | Back alignment and structure |
|---|
Score = 571 bits (1474), Expect = 0.0
Identities = 169/437 (38%), Positives = 247/437 (56%), Gaps = 13/437 (2%)
Query: 150 PDEEVTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPT 209
E T+ M RVVVTG+G+VSPLG ++ + L+ G SG+ +
Sbjct: 10 GTLEAQTQGPGSMT-LRVVVTGIGIVSPLGCGKELVWQRLIGGGSGLRRLGDDIAGELSA 68
Query: 210 KIAAEIK--------SFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELD 261
K+ ++ F + V K ++MD+F+ + A +ALA+ G E
Sbjct: 69 KVGGTVQDVAEDPEGGFDPERSVPHKELRKMDRFIQMAMVAADEALAEAGW--APEAEQQ 126
Query: 262 KSKCGVLIGSGLGGMKVFYDAIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPN 320
+ + ++ SG+GG +A+ ++++PF +PF +N+ + +++ + GP
Sbjct: 127 RERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKHRFRGPL 186
Query: 321 YSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNND-P 379
TACA S I +A I GEA+V+L GG++AA + LGGF A RALS ++ P
Sbjct: 187 GCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKVSLGGFAAARALSTGFSEEP 246
Query: 380 TKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD 439
+ASRP+D +RDGFVMGEGA ++++E L+HA RGA+ AE G T+DAYHMT D
Sbjct: 247 VRASRPFDRDRDGFVMGEGAAMVVVESLDHALARGARPIAEIIGYGTTADAYHMTAGPDD 306
Query: 440 GVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKS 499
G G + ++ AL V+ E V+Y+NAHATSTP GD E +AL FG G ++STKS
Sbjct: 307 GSGAMRAMKLALRMGDVAPEQVDYVNAHATSTPVGDAGEIEALKTVFGVGAGPAISSTKS 366
Query: 500 MIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSN 559
GHLLGAAGA+EA + A+R G + +NLE+PD D L+GP + V+ ALSN
Sbjct: 367 ATGHLLGAAGAIEAAFSILALRDGVLPGTLNLEHPDPAADGLDLIGPAARHVPVEIALSN 426
Query: 560 SFGFGGHNSSIIFSPYK 576
FGFGG N+S++F Y
Sbjct: 427 GFGFGGVNASVLFRRYP 443
|
| >3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} Length = 413 | Back alignment and structure |
|---|
Score = 569 bits (1470), Expect = 0.0
Identities = 173/417 (41%), Positives = 266/417 (63%), Gaps = 7/417 (1%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 221
M ++RVVVTG+G V+P+G++ + + N +GV+G++++ + FP KIAAE+K F +
Sbjct: 1 MDKRRVVVTGIGAVTPIGNDAETSWENAKKGVNGVAKMTRLNPDDFPVKIAAELKDFDVE 60
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 281
++ K +++MD+F Y + + + A+ D G+ +++ + ++ GV IGSG+GGM+ F
Sbjct: 61 KYLEKKEARKMDRFTHYAIASAEMAVQDSGLV---IDDSNANRVGVWIGSGIGGMETFET 117
Query: 282 AIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 340
E +++++PF VP +MGS +++ G G N + TACAT+ I +A
Sbjct: 118 QYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGAKGINSTTVTACATATNSIGDAFKV 177
Query: 341 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 400
I RG+A+ M+ GG++A + + L GF A +ALS N DP A RP+D +RDGF++GEGAG
Sbjct: 178 IERGDADAMITGGAEAPITKMSLAGFTANKALS-LNPDPETACRPFDKDRDGFIIGEGAG 236
Query: 401 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 460
+++LEE EHAK RGAKIYAE G T DAYH+T P P+G G ++ A+ +G++ +
Sbjct: 237 IVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKMAIDDAGLTPDK 296
Query: 461 VNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQA 519
V+YINAH TSTP D E QA+ FG++ + L ++STKSM GH LGA+G +EAI +
Sbjct: 297 VDYINAHGTSTPYNDEYETQAIKTVFGEHAKKLAISSTKSMTGHTLGASGGIEAIFALLT 356
Query: 520 IRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 576
IR I P I+L+N D V D + V + V +SNSFGFGGHN++++F +
Sbjct: 357 IRDNIIAPTIHLKNQDEVCDLD-YVPNEAREANVNVVISNSFGFGGHNATLVFKRIE 412
|
| >2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} Length = 437 | Back alignment and structure |
|---|
Score = 569 bits (1470), Expect = 0.0
Identities = 171/417 (41%), Positives = 260/417 (62%), Gaps = 7/417 (1%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 221
+ KRVV+TGMG +SP+G++ + N L+GV+GI +I D + +A E+K+F+ +
Sbjct: 25 SQNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIE 84
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 281
+ K ++RMD+F Y + A ++A+ D + +NE + GV IGSG+GGM+ F
Sbjct: 85 DHIDKKEARRMDRFTQYAIVAAREAVKDAQLD---INENTADRIGVWIGSGIGGMETFEI 141
Query: 282 AIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 340
A + L ++++PF VP +M + +++DLG GPN + TACAT I A
Sbjct: 142 AHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKI 201
Query: 341 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 400
+ RG+A+ M+ GG++A + + + GF A RALS N+D A RP+ RDGFVMGEGAG
Sbjct: 202 VQRGDADAMITGGTEAPITHMAIAGFSASRALS-TNDDIETACRPFQEGRDGFVMGEGAG 260
Query: 401 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 460
+L++E LE A+ RGA IYAE G T DAYH+T P P+G G ++ A+ +G+ +D
Sbjct: 261 ILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKD 320
Query: 461 VNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQA 519
V Y+NAH TSTP GD+ E +A+ + FG+ + L+V+STKSM GHLLGA G +EAI +
Sbjct: 321 VQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALS 380
Query: 520 IRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 576
I+ + P I+ PD D + +V + + L++ A+SNS GFGGHN+ ++F ++
Sbjct: 381 IKDSKVAPTIHAVTPDPECDLD-IVPNEAQDLDITYAMSNSLGFGGHNAVLVFKKFE 436
|
| >1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Length = 408 | Back alignment and structure |
|---|
Score = 567 bits (1463), Expect = 0.0
Identities = 192/410 (46%), Positives = 267/410 (65%), Gaps = 8/410 (1%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 224
+RVVVTG+G ++P+G + F+ L G SG+ I FD ++ P +IAAE+ ++
Sbjct: 2 RRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITRFDASALPVRIAAEVD-VDPGAYL 60
Query: 225 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIE 284
K +R+D+F+ Y L A + AL D G+ +LD + G L+G+G+GGM+ +
Sbjct: 61 DRKELRRLDRFVQYALIAAQLALEDAGLK---PEDLDPERVGTLVGTGIGGMETWEAQSR 117
Query: 285 ALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIR 343
+++PF +P NM SA +AM G+ GP+ ++ TACAT + +A I
Sbjct: 118 VFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTVVTACATGADALGSALRMIQL 177
Query: 344 GEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 403
GEA+++L GG++AA+ P+ +G F RALS RN +P KASRP+ ++RDGFVMGEGAGVL+
Sbjct: 178 GEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRDGFVMGEGAGVLV 237
Query: 404 LEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNY 463
LE EHAKKRGA+IYAE G ++DA+H+TEPHP+G G L + +AL +G++ E V Y
Sbjct: 238 LEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGY 297
Query: 464 INAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRT 522
INAH TSTP GD E A+ FG + + L V+STKSMIGHLLGAAGAVEAIA VQA+
Sbjct: 298 INAHGTSTPVGDRAEVLAIKRVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYH 357
Query: 523 GWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIF 572
G I P INLE+PD +D + + P+ +V ALSNSF FGGHN+ + F
Sbjct: 358 GVIPPTINLEDPDPELDLDFV--PEPREAKVDYALSNSFAFGGHNAVLAF 405
|
| >3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A Length = 428 | Back alignment and structure |
|---|
Score = 565 bits (1458), Expect = 0.0
Identities = 181/429 (42%), Positives = 255/429 (59%), Gaps = 14/429 (3%)
Query: 157 KKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIK 216
H +RVV+TG+GLVSPL + + LL G SG + F+ +IA I
Sbjct: 2 AHHHHHHMRRVVITGLGLVSPLASGVEETWKRLLAGESGARRVTEFEVDDLACQIACRIP 61
Query: 217 S-------FSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLI 269
F+ D + PK +++D F++Y + A +AL D G N+ D+ + GVLI
Sbjct: 62 VGDGTNGTFNPDLHMDPKEQRKVDPFIVYAVGAADQALDDAGW--HPENDEDQVRTGVLI 119
Query: 270 GSGLGGMKVFYDAIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACA 328
GSG+GG++ +A LR ++++PF +P N+ S +++ GPN+S+ TACA
Sbjct: 120 GSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIKHKLRGPNHSVVTACA 179
Query: 329 TSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALS-QRNNDPTKASRPWD 387
T I +AA I G+A+VM+ GG+++ V I L GF AC+ALS +RN+DPT ASRP+D
Sbjct: 180 TGTHAIGDAARLIAFGDADVMVAGGTESPVSRISLAGFAACKALSTERNDDPTAASRPYD 239
Query: 388 INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCI 447
+RDGFVMGEGAG+++LEELEHA RGAKIYAE G + DA+H+T P G G C+
Sbjct: 240 EDRDGFVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCM 299
Query: 448 EKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLG 506
AL +G+ ++++YINAH TST D E A+ G+ + ++STKS IGHLLG
Sbjct: 300 VAALKRAGIVPDEIDYINAHGTSTM-ADTIELGAVERVVGEAAAKISMSSTKSSIGHLLG 358
Query: 507 AAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGH 566
AAGA EA+ AIR +NL+NP A + LV K ++ ALSNSFGFGG
Sbjct: 359 AAGAAEAVFSTLAIRDNIAPATLNLDNPAAQTRID-LVPHKPRERKIDVALSNSFGFGGT 417
Query: 567 NSSIIFSPY 575
N+S++ Y
Sbjct: 418 NASLVLRRY 426
|
| >2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A Length = 438 | Back alignment and structure |
|---|
Score = 563 bits (1453), Expect = 0.0
Identities = 163/430 (37%), Positives = 242/430 (56%), Gaps = 16/430 (3%)
Query: 155 TTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAE 214
+ + + + +RVV+TG+GLV+PLG + ++ L+ G SGI + + S P +AA
Sbjct: 12 SIEGRSRLH-RRVVITGIGLVTPLGVGTHLVWDRLIGGESGIVSLVGEEYKSIPCSVAAY 70
Query: 215 IKS------FSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVL 268
+ F+ +V+ K M + + A + A+ D G +E D+ GV
Sbjct: 71 VPRGSDEGQFNEQNFVSKSDIKSMSSPTIMAIGAAELAMKDSGW--HPQSEADQVATGVA 128
Query: 269 IGSGLGGMKVFYDAIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTAC 327
IG G+ ++V + + Y K++PF VP NM + +++ GPN+++STAC
Sbjct: 129 IGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYKLKGPNHAVSTAC 188
Query: 328 ATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWD 387
T + ++ I G+A+VM+ GG+D+ + P+ L GF RALS N+DP A RP+
Sbjct: 189 TTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALS-TNSDPKLACRPFH 247
Query: 388 INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCI 447
RDGFVMGEGA VL+LEE EHA +R A+IYAE G + DA H+T P P+G G + C+
Sbjct: 248 PKRDGFVMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCM 307
Query: 448 EKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLG 506
AL +GV E+++YINAHATSTP GD E +A+ H F + L V+STK GHLLG
Sbjct: 308 AAALKDAGVQPEEISYINAHATSTPLGDAAENKAIKHLFKDHAYALAVSSTKGATGHLLG 367
Query: 507 AAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKA---ALSNSFGF 563
AAGAVEA A + P +NL+ + D N V K + + + L+NSFGF
Sbjct: 368 AAGAVEAAFTTLACYYQKLPPTLNLDCSEPEFDLN-YVPLKAQEWKTEKRFIGLTNSFGF 426
Query: 564 GGHNSSIIFS 573
GG N+++ +
Sbjct: 427 GGTNATLCIA 436
|
| >2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* Length = 416 | Back alignment and structure |
|---|
Score = 560 bits (1446), Expect = 0.0
Identities = 134/424 (31%), Positives = 217/424 (51%), Gaps = 12/424 (2%)
Query: 155 TTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSF--PTKIA 212
+ + VVVT + + + + + + LL G SGI +E T + KI
Sbjct: 2 SQPSTANGGFPSVVVTAVTATTSISPDIESTWKGLLAGESGIHALEDEFVTKWDLAVKIG 61
Query: 213 AEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSG 272
+K + +RM G + G E +D + V++G+G
Sbjct: 62 GHLKDPVDS-HMGRLDMRRMSYVQRMGKLLGGQLWESAGSPE-----VDPDRFAVVVGTG 115
Query: 273 LGGMKVFYDAIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSN 331
LGG + ++ + + +K++P V N +A++ + LG + +AC++ +
Sbjct: 116 LGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGARAGVMTPVSACSSGS 175
Query: 332 FCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRD 391
I +A I+ G+A+V +CGG + + + + F RA+S RN++P +ASRP+D +RD
Sbjct: 176 EAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTRNDEPERASRPFDKDRD 235
Query: 392 GFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKAL 451
GFV GE ++L+E EHAK RGAK A G TSDA+HM P DGV + ++L
Sbjct: 236 GFVFGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSL 295
Query: 452 AHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAV 511
+G+S D++++NAH T+TP GD E A+ V + KS +GH +GA GA+
Sbjct: 296 ELAGLSPADIDHVNAHGTATPIGDAAEANAIRVAGCDQ--AAVYAPKSALGHSIGAVGAL 353
Query: 512 EAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSII 571
E++ V +R G I P +N E PD +D +V V + + + A++NSFGFGGHN ++
Sbjct: 354 ESVLTVLTLRDGVIPPTLNYETPDPEIDLDV-VAGEPRYGDYRYAVNNSFGFGGHNVALA 412
Query: 572 FSPY 575
F Y
Sbjct: 413 FGRY 416
|
| >1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 424 | Back alignment and structure |
|---|
Score = 558 bits (1441), Expect = 0.0
Identities = 135/422 (31%), Positives = 210/422 (49%), Gaps = 13/422 (3%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 221
MK +RVV+TG+G+ +P G+ F+ L G + I FD + + +++AAE
Sbjct: 1 MK-RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEADFDPVA 59
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 281
P+ RMD+ + + ++A A G+ + LD ++ GV +GS +
Sbjct: 60 EGFGPRELDRMDRASQFAVACAREAFAASGLD---PDTLDPARVGVSLGSAVAAATSLER 116
Query: 282 AIEALR-------ISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCI 334
L + ++ + ++ A +A +G GP +ST C + +
Sbjct: 117 EYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAEGPVTMVSTGCTSGLDSV 176
Query: 335 LNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFV 394
NA I G A+VM G +D + PI + F A RA + RN+DP ASRP+D RDGFV
Sbjct: 177 GNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARNDDPEHASRPFDGTRDGFV 236
Query: 395 MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHS 454
+ EGA + +LE+ + A RGA+I+AE G + +AYHMT DG + I AL S
Sbjct: 237 LAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDES 296
Query: 455 GVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEA 513
D++YINAH + T D E A G++ R V+S KSM+GH LGA G++E
Sbjct: 297 RTDATDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEI 356
Query: 514 IAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573
A V A+ G + P NL D D + + +ER ++++ L+ GFGG S+++
Sbjct: 357 AACVLALEHGVVPPTANLRTSDPECDLDYVPLEARER-KLRSVLTVGSGFGGFQSAMVLR 415
Query: 574 PY 575
Sbjct: 416 DA 417
|
| >4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} Length = 412 | Back alignment and structure |
|---|
Score = 554 bits (1429), Expect = 0.0
Identities = 131/418 (31%), Positives = 202/418 (48%), Gaps = 11/418 (2%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTS-FPTKIAAEIKSFST 220
KRVV+TGMG V+ LG D L G + + + +D T++AA + F+
Sbjct: 3 GSMKRVVITGMGGVTALGSRWDEIEAALKAGRNAVRRMPDWDYFESLHTRLAAPLPGFAQ 62
Query: 221 DGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFY 280
K ++ M + +Y + A + ALAD G D + + GV GS G ++
Sbjct: 63 PADWPRKKTRSMGRVSMYAVRASELALADAGFAGD--ESISDGRMGVAYGSSSGSVEPIR 120
Query: 281 DAIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAAN 339
L + + + +++ G S+ACA+ + I A
Sbjct: 121 AFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWDLKGRIVPTSSACASGSQAIGYAYE 180
Query: 340 HIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGA 399
+I G+ +ML GG++ + F A S RN++P RP+D RDG V+GEGA
Sbjct: 181 NIAMGKQTLMLAGGAEEL-SGPAVAVFDTLYATSTRNDEPHLTPRPFDAKRDGLVVGEGA 239
Query: 400 GVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRE 459
L+LEE EHAK RGA I+AE G SD HMT+P + ++ AL + +
Sbjct: 240 ATLVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQPTAS--TMARAMQLALEDAKLDAN 297
Query: 460 DVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQA 519
+ Y+NAH TST GD+ E QA FG+ + ++S KS +GH LGA GA+EA ++
Sbjct: 298 AIAYVNAHGTSTDRGDVAESQATARTFGER--MPISSLKSYVGHTLGACGALEAWWTIEM 355
Query: 520 IRTGWIHPNINLENPD-AVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 576
++ W P +NL D A + + G + + + +SN+F FGG N+S+IF +
Sbjct: 356 MKRNWYAPTLNLTEVDPACAPLDYIRGEARAI-DAEYVMSNNFAFGGINTSLIFRRVR 412
|
| >2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A Length = 431 | Back alignment and structure |
|---|
Score = 553 bits (1428), Expect = 0.0
Identities = 168/431 (38%), Positives = 252/431 (58%), Gaps = 24/431 (5%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTS--------------FPTK 210
+RVVVTG+G+V+PLG + + L++G GI + D +K
Sbjct: 1 RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSK 60
Query: 211 IAAEIKSFSTDGWVAPKL---SKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGV 267
+AA + S G L SK + F+ Y + A +AL D E +K + GV
Sbjct: 61 VAAFVPYGSNPGEFDEALWLNSKAVANFIGYAVCAADEALRDAEWLP--TEEEEKERTGV 118
Query: 268 LIGSGLGGMKVFYDAIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTA 326
IG G+G + +A + + ++++PF +P NM S ++M G+ GPN++ TA
Sbjct: 119 SIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTA 178
Query: 327 CATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNND-PTKASRP 385
CAT I +A I G+A+VM+ GG+++++ + + GF RALS + N P +ASRP
Sbjct: 179 CATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRP 238
Query: 386 WDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVIL 445
+D +RDGFV+GEG+GV++LEE EHAK+RGAKIYAE G + DA+H+T+P DG G +L
Sbjct: 239 FDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVL 298
Query: 446 CIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQ---NRGLRVNSTKSMIG 502
+ +AL SG+ ++Y+NAHATSTP GD E +A+ F + + L +STK G
Sbjct: 299 AMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATG 358
Query: 503 HLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFG 562
HLLGAAGAVEAI + AI G +N++NPD + D + +++ V+ A+SNSFG
Sbjct: 359 HLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFG 418
Query: 563 FGGHNSSIIFS 573
FGG N+S++F+
Sbjct: 419 FGGTNASLLFA 429
|
| >2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} Length = 434 | Back alignment and structure |
|---|
Score = 553 bits (1427), Expect = 0.0
Identities = 141/432 (32%), Positives = 215/432 (49%), Gaps = 16/432 (3%)
Query: 148 VQPDEEVTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSF 207
V + T VVVTG+ + + L + + + LL+ SGI ++ F
Sbjct: 15 VPRGSHMVT----GKAFPYVVVTGIAMTTALATDAETTWKLLLDRQSGIRTLDDPFVEEF 70
Query: 208 --PTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKC 265
P +I + D + +RM ++ + G E D ++
Sbjct: 71 DLPVRIGGHLL-EEFDHQLTRIELRRMGYLQRMSTVLSRRLWENAGSPEV-----DTNRL 124
Query: 266 GVLIGSGLGGMKVFYDAIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSIS 324
V IG+GLG + + + +R K ++P V N +A + ++ +
Sbjct: 125 MVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHAKAGVMTPV 184
Query: 325 TACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACR-ALSQRNNDPTKAS 383
+ACA+ I A I+ GEA+ +CGG + + + + GF R +S N+DP A
Sbjct: 185 SACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGAC 244
Query: 384 RPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGV 443
RP+D +RDGFV GEG +LL+E EHAK RGA I A G S TSD +HM P P+G
Sbjct: 245 RPFDRDRDGFVFGEGGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERA 304
Query: 444 ILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGH 503
I +A+ +G++ D++++NAHAT T GD+ E +A+ + G NR V + KS +GH
Sbjct: 305 GHAITRAIQLAGLAPGDIDHVNAHATGTQVGDLAEGRAINNALGGNR-PAVYAPKSALGH 363
Query: 504 LLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGF 563
+GA GAVE+I V A+R I P +NL N D +D +V V + + A++NSFGF
Sbjct: 364 SVGAVGAVESILTVLALRDQVIPPTLNLVNLDPEIDLDV-VAGEPRPGNYRYAINNSFGF 422
Query: 564 GGHNSSIIFSPY 575
GGHN +I F Y
Sbjct: 423 GGHNVAIAFGRY 434
|
| >1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 415 | Back alignment and structure |
|---|
Score = 542 bits (1399), Expect = 0.0
Identities = 101/416 (24%), Positives = 178/416 (42%), Gaps = 12/416 (2%)
Query: 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTD 221
K V++TG+G+V+P G +++ +L+G G+ + FD + +P +A +I F
Sbjct: 6 DDDKSVLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDDFHAP 65
Query: 222 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYD 281
+ +L + D LTA AL D L GV+ + GG +
Sbjct: 66 DHIPGRLLPQTDPSTRLALTAADWALQDAKAD---PESLTDYDMGVVTANACGGFDFTHR 122
Query: 282 AIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 340
L K ++ + + + +++ G GP+ ++ A + +A
Sbjct: 123 EFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSSALVAEQAGGLDALGHARRT 182
Query: 341 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 400
I RG +++ GG D+A+ P G +A +S DP +A P+D G+V GEG
Sbjct: 183 IRRG-TPLVVSGGVDSALDPWGWVSQIASGRISTA-TDPDRAYLPFDERAAGYVPGEGGA 240
Query: 401 VLLLEELEHAKKRGA-KIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRE 459
+L+LE+ A+ RG Y E G + T D + G+ I AL +G E
Sbjct: 241 ILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGS---GRPAGLERAIRLALNDAGTGPE 297
Query: 460 DVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQA 519
DV+ + A P D E +A+ FG G+ V K+ G L G ++ + + +
Sbjct: 298 DVDVVFADGAGVPELDAAEARAIGRVFG-REGVPVTVPKTTTGRLYSGGGPLDVVTALMS 356
Query: 520 IRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 575
+R G I P + + ++++G + + AL + G G NS+ + +
Sbjct: 357 LREGVIAPTAGVTSVPREYGIDLVLGEPRST-APRTALVLARGRWGFNSAAVLRRF 411
|
| >2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... Length = 406 | Back alignment and structure |
|---|
Score = 523 bits (1350), Expect = 0.0
Identities = 149/415 (35%), Positives = 224/415 (53%), Gaps = 14/415 (3%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 224
KR V+TG+G+VS +G+ +L EG SGI+ + + + + +K T G +
Sbjct: 2 KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLI 60
Query: 225 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIE 284
K+ + M +Y + ++A+AD G++ + + + G++ GSG G + +
Sbjct: 61 DRKVVRFMSDASIYAFLSMEQAIADAGLSPE--AYQNNPRVGLIAGSGGGSPRFQVFGAD 118
Query: 285 ALRIS--YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHII 342
A+R K + P+ V A + SA LA G NYSIS+ACATS CI NA I
Sbjct: 119 AMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQ 178
Query: 343 RGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNND-PTKASRPWDINRDGFVMGEGAGV 401
G+ +++ GG + + F A ALS + ND P KASR +D +RDGFV+ G G+
Sbjct: 179 LGKQDIVFAGGGEELCWEMA-CEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGM 237
Query: 402 LLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDV 461
+++EELEHA RGA IYAE G TSD M P G G + C++ A+ +
Sbjct: 238 VVVEELEHALARGAHIYAEIVGYGATSDGADMVA--PSGEGAVRCMKMAMHGVD---TPI 292
Query: 462 NYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIR 521
+Y+N+H TSTP GD+KE A+ FG +++TK+M GH LGAAG EAI + +
Sbjct: 293 DYLNSHGTSTPVGDVKELAAIREVFGDK-SPAISATKAMTGHSLGAAGVQEAIYSLLMLE 351
Query: 522 TGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 576
G+I P+IN+E D +V +R E+ +SNSFGFGG N++++ K
Sbjct: 352 HGFIAPSINIEELDEQAAGLNIVTETTDR-ELTTVMSNSFGFGGTNATLVMRKLK 405
|
| >3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* Length = 428 | Back alignment and structure |
|---|
Score = 524 bits (1351), Expect = 0.0
Identities = 154/431 (35%), Positives = 227/431 (52%), Gaps = 13/431 (3%)
Query: 149 QPDEEVTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFP 208
+ + + +RVVVTGMG+VS +G + +L E SGIS E + F
Sbjct: 7 HHMGTLEAQTQGPGSMRRVVVTGMGIVSSIGSNTEEVTASLREAKSGISRAEEYAELGFR 66
Query: 209 TKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVL 268
++ + V + + + + A +A+AD G+TE+ E+ + G++
Sbjct: 67 CQVHG-APDIDIESLVDRRAMRFHGRGTAWNHIAMDQAIADAGLTEE---EVSNERTGII 122
Query: 269 IGSGLGGMKVFYDAIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTAC 327
+GSG + D+ + R K++ PF VP A ++ SA LA G NYSIS+AC
Sbjct: 123 MGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKIKGINYSISSAC 182
Query: 328 ATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWD 387
ATSN CI NA I G+ + M GG + + + S+ N+ P+ ASR +D
Sbjct: 183 ATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDWTLSVLFDAMGAMSSKYNDTPSTASRAYD 242
Query: 388 INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCI 447
NRDGFV+ GAGVL+LE+LE A RGAKIY E G TSD Y M P G G I C+
Sbjct: 243 KNRDGFVIAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYDMVA--PSGEGAIRCM 300
Query: 448 EKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLG 506
+ AL+ ++YIN HATSTPAGD E +A+ FG + +TKS+ GH LG
Sbjct: 301 KMALSTVT---SKIDYINPHATSTPAGDAPEIEAIRQIFGAGDVCPPIAATKSLTGHSLG 357
Query: 507 AAGAVEAIAVVQAIRTGWIHPNINLENPD-AVVDTNVLVGPKKERLEVKAALSNSFGFGG 565
A G EAI + ++ +I + ++E D A D +V + + +++ LSNSFGFGG
Sbjct: 358 ATGVQEAIYSLLMMQNNFICESAHIEELDPAFADMP-IVRKRIDNVQLNTVLSNSFGFGG 416
Query: 566 HNSSIIFSPYK 576
N++++F Y+
Sbjct: 417 TNATLVFQRYQ 427
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 | Back alignment and structure |
|---|
Score = 390 bits (1002), Expect = e-120
Identities = 77/462 (16%), Positives = 154/462 (33%), Gaps = 45/462 (9%)
Query: 146 VAVQPDEEVTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCT 205
V V+ D E K + G + P+ ++ + G + +
Sbjct: 926 VIVEEDLEPFEASK---ETAEQFKHQHGDKVDIFEIPETG-EYSVKLLKGAT-LYIPKAL 980
Query: 206 SFPTKIAAEIKS-FSTDGWVAP-KLSKRMDKFMLYLLTAGKKALADGGIT--EDVMNELD 261
F +A +I + ++ + + ++D L++L + +A GIT ++ +
Sbjct: 981 RFDRLVAGQIPTGWNAKTYGISDDIISQVDPITLFVLVSVVEAFIASGITDPYEMYKYVH 1040
Query: 262 KSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNY 321
S+ G GSG+GG+ + N M + + + + GP
Sbjct: 1041 VSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLLISSSGPIK 1100
Query: 322 SISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNND--- 378
+ ACATS + I+ G+A + + GG D G F +A S +
Sbjct: 1101 TPVGACATSVESVDIGVETILSGKARICIVGGYDDF-QEEGSFEFGNMKATSNTLEEFEH 1159
Query: 379 ---PTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTE 435
P + SRP R+GF+ +GAG+ ++ + + A K G IY + +D +
Sbjct: 1160 GRTPAEMSRPATTTRNGFMEAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSV 1219
Query: 436 PHPDGVGVIL---------------------CIEKALAHSGVSR---EDVNYINAHATST 471
P P G G++ + + + ++ + A
Sbjct: 1220 PAP-GKGILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEI 1278
Query: 472 PAGDIKEYQALIHCFGQNRGLR-VNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNIN 530
P+ D E+ N + + + G+ A G ++
Sbjct: 1279 PSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLG 1338
Query: 531 LENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIF 572
+ + T+ K E + + + G+ +F
Sbjct: 1339 VASFH---GTSTKANDKNESATINEMMKHLGRSEGNPVIGVF 1377
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 | Back alignment and structure |
|---|
Score = 227 bits (579), Expect = 5e-64
Identities = 50/238 (21%), Positives = 81/238 (34%), Gaps = 13/238 (5%)
Query: 343 RGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 402
+G S L R L R K ++ + E +
Sbjct: 1224 KGILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQ-IKDWVENEL---EALKLEAEEIP 1279
Query: 403 LLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVN 462
++ E +R +I+ E + I + ALA G++ +D+
Sbjct: 1280 SEDQNEFLLERTREIHNEAES-QLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLG 1338
Query: 463 YINAHATSTPAGDIKEYQALIHCFGQNRG-----LRVNSTKSMIGHLLGAAGAVEAIAVV 517
+ H TST A D E + + K + GH GAAGA +
Sbjct: 1339 VASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGAL 1398
Query: 518 QAIRTGWIHPNINLENPDAVVDT-NVLVGPKK--ERLEVKAALSNSFGFGGHNSSIIF 572
Q + +G I N N +N D +++ ++ P K + V+A SFGFG I
Sbjct: 1399 QILNSGIIPGNRNADNVDKILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIV 1456
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Length = 1878 | Back alignment and structure |
|---|
Score = 314 bits (806), Expect = 7e-94
Identities = 73/351 (20%), Positives = 127/351 (36%), Gaps = 24/351 (6%)
Query: 187 NNLLEGVSGISEIETFDCTSFPTKIAAEIKS-FSTDGWVAP-KLSKRMDKFMLYLLTAGK 244
+ G + + F +A +I + + + P + +++D LY+L +
Sbjct: 1137 QYTVRLRKGAT-LLIPKALQFDRLVAGQIPTGWDARRYGVPEDIIQQVDPVTLYVLVSVA 1195
Query: 245 KALADGGIT--EDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFAT 302
+AL GIT + + S+ G IGSG+GG + +
Sbjct: 1196 EALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLDKPVQKDILQESFV 1255
Query: 303 TNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSD-----AA 357
M + + + L GP + ACAT+ + + I++G+A V L GG D +
Sbjct: 1256 NTMAAWVNMLLLSSTGPIKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFDDFQEEGS 1315
Query: 358 VIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKI 417
+G + R +P + SRP R+GF+ +G GV ++ + A + G I
Sbjct: 1316 YEFANMGATSNAKEEFARGREPGEMSRPTSTTRNGFMESQGCGVQVIMTAQLALEMGVPI 1375
Query: 418 YAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNY-----------INA 466
Y S +D + P P G GV+ + + D+ Y I
Sbjct: 1376 YGIVAMTSTATDKIGRSVPAP-GQGVLTTAREKSGNFPSPLLDIKYRRRQLELRRQQIKQ 1434
Query: 467 HATSTPAGDIKEYQALIHCFGQNRG--LRVNSTKSMIGHLLGAAGAVEAIA 515
S +E A+ + G + H+ A EA A
Sbjct: 1435 WKESEYLYLQEEVAAIKSQRSEEDGPFDETAYLRERTEHIEREARRQEAEA 1485
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Length = 1878 | Back alignment and structure |
|---|
Score = 170 bits (431), Expect = 1e-44
Identities = 45/183 (24%), Positives = 71/183 (38%), Gaps = 11/183 (6%)
Query: 398 GAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGV-GVILCIEKALAHSGV 456
+E + ++R I E R ++A I + ALA G+
Sbjct: 1455 SEEDGPFDETAYLRERTEHIEREARRQ--EAEAQTSFGNEFWRRDSRIAPLRGALATWGL 1512
Query: 457 SREDVNYINAHATSTPAGDIKEYQALIHCFGQNRG-----LRVNSTKSMIGHLLGAAGAV 511
+ +D+ + H TST A D E + + K + GH GAAGA
Sbjct: 1513 TIDDLGVASFHGTSTVANDKNESDVICQQLKHLGRTKGNAVLGIFQKYLTGHPKGAAGAW 1572
Query: 512 EAIAVVQAIRTGWIHPNINLENPDAVVDT-NVLVGPKKE--RLEVKAALSNSFGFGGHNS 568
+Q + TG + N N +N D V++ + +V P + +KA SFGFG +
Sbjct: 1573 MLNGCLQVLNTGIVPGNRNADNVDKVMEQFDYIVYPSRSIKTDGIKAFSVTSFGFGQKGA 1632
Query: 569 SII 571
I
Sbjct: 1633 QAI 1635
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Length = 1887 | Back alignment and structure |
|---|
Score = 293 bits (750), Expect = 2e-86
Identities = 65/377 (17%), Positives = 132/377 (35%), Gaps = 39/377 (10%)
Query: 187 NNLLEGVSGISEIETFDCTSFPTKIAAEIKS-FSTDGWVAP-KLSKRMDKFMLYLLTAGK 244
++ + G + + F +A +I + ++ + + ++D L++L +
Sbjct: 1162 EYSVKLLKGAT-LYIPKALRFDRLVAGQIPTGWNAKTYGISDDIISQVDPITLFVLVSVV 1220
Query: 245 KALADGGIT--EDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFAT 302
+A GIT ++ + S+ G GSG+GG+ + N
Sbjct: 1221 EAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFI 1280
Query: 303 TNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG 362
M + + + + GP + ACATS + I+ G+A + + GG D G
Sbjct: 1281 NTMSAWVNMLLISSSGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDF-QEEG 1339
Query: 363 LGGFVACRALSQRNND------PTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAK 416
F +A S + P + SRP R+GF+ +GAG+ ++ + + A K G
Sbjct: 1340 SFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNGFMEAQGAGIQIIMQADLALKMGVP 1399
Query: 417 IYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSR------------------ 458
IY + +D + P P G G++ + + +
Sbjct: 1400 IYGIVAMAATATDKIGRSVPAP-GKGILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQ 1458
Query: 459 ------EDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLR-VNSTKSMIGHLLGAAGAV 511
++ + A P+ D E+ N + + + G+
Sbjct: 1459 IKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFY-KRDP 1517
Query: 512 EAIAVVQAIRTGWIHPN 528
+ A+ T + +
Sbjct: 1518 RIAPLRGALATYGLTID 1534
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Length = 1887 | Back alignment and structure |
|---|
Score = 182 bits (462), Expect = 1e-48
Identities = 50/238 (21%), Positives = 82/238 (34%), Gaps = 13/238 (5%)
Query: 343 RGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 402
+G S L R L R K ++ + E +
Sbjct: 1423 KGILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQ-IKDWVENEL---EALKLEAEEIP 1478
Query: 403 LLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVN 462
++ E +R +I+ E + I + ALA G++ +D+
Sbjct: 1479 SEDQNEFLLERTREIHNEAES-QLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLG 1537
Query: 463 YINAHATSTPAGDIKEYQALIHCFG-----QNRGLRVNSTKSMIGHLLGAAGAVEAIAVV 517
+ H TST A D E + + + K + GH GAAGA +
Sbjct: 1538 VASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGAL 1597
Query: 518 QAIRTGWIHPNINLENPDAVVDT-NVLVGPKK--ERLEVKAALSNSFGFGGHNSSIIF 572
Q + +G I N N +N D +++ ++ P K + V+A SFGFG I
Sbjct: 1598 QILNSGIIPGNRNADNVDKILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIV 1655
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 | Back alignment and structure |
|---|
Score = 162 bits (411), Expect = 4e-42
Identities = 87/335 (25%), Positives = 136/335 (40%), Gaps = 29/335 (8%)
Query: 246 ALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNM 305
A+ DGGI L + GV +G DA EAL + + + + M
Sbjct: 89 AIVDGGI---NPASLRGTSTGVWVGV------SSSDASEALSRDPETLVGYSMIGCQRAM 139
Query: 306 GSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGG 365
+ L+ + GP+ +I TAC++S + +A I GE + + GG + + P
Sbjct: 140 MANRLSFFFDFKGPSITIDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSLQ 199
Query: 366 FVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGS 425
F+ LS R +D G+ E +LL + A++ +YA
Sbjct: 200 FMKLGMLS-----QDGTCRSFDAEGTGYCRAEAVVAVLLTKKSLARR----VYATILNAG 250
Query: 426 FTSDAYH---MTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQAL 482
+D +T P G I A +G E + YI AH T T GD +E +
Sbjct: 251 TNTDGSKEQGVT--FPSGDVQEQLIRSLYAPAGPDPESLEYIEAHGTGTKVGDPQELNGI 308
Query: 483 IHCFGQNR--GLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENP----DA 536
++ R L + STKS +GH A+G I V+ ++ G PN++ P A
Sbjct: 309 VNALCATRREPLLIGSTKSNMGHPEPASGVAALIKVLLSLEHGVWAPNLHYHTPNPEIPA 368
Query: 537 VVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSII 571
+ D + V + + NSFGFGG N +I
Sbjct: 369 LQDGRLQVVDRPLPIRGGNVGINSFGFGGSNVHVI 403
|
| >2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Length = 917 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 8e-33
Identities = 86/291 (29%), Positives = 127/291 (43%), Gaps = 29/291 (9%)
Query: 300 FATTNMGSAM---LAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDA 356
T S +A LG GP ++ TAC++ + A + R E + L GG
Sbjct: 169 VGTGTASSVASGRVAYCLGLEGPAMTVDTACSSGLTALHLAMESLRRDECGLALAGGVTV 228
Query: 357 AVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAK 416
P F + L+ +P+ DGF + EGAGVL+L+ L A++ G
Sbjct: 229 MSSPGAFTEFRSQGGLA-----ADGRCKPFSKAADGFGLAEGAGVLVLQRLSAARREGRP 283
Query: 417 IYAEFRGGSFTSDAYH--MTEPH-PDGVGVILCIEKALAHSGVSREDVNYINAHATSTPA 473
+ A RG + D +T P P VI +AL ++GV DV+Y+ AH T T
Sbjct: 284 VLAVLRGSAVNQDGASNGLTAPSGPAQQRVI---RRALENAGVRAGDVDYVEAHGTGTRL 340
Query: 474 GDIKEYQALIHCFGQNRG----LRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNI 529
GD E AL+ +G R L + S KS IGH AAG + V A+R G + +
Sbjct: 341 GDPIEVHALLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGEMPRTL 400
Query: 530 NLENPDAVVD---------TNVLVGPKKERLEVKAALSNSFGFGGHNSSII 571
+ + P ++ + P ER +A +S SFG G N+ +I
Sbjct: 401 HFDEPSPQIEWDLGAVSVVSQARSWPAGERPR-RAGVS-SFGISGTNAHVI 449
|
| >2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Length = 915 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 1e-32
Identities = 84/291 (28%), Positives = 134/291 (46%), Gaps = 29/291 (9%)
Query: 300 FATTNMGSAM---LAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDA 356
T + ++ +G GP+ S+ TAC++S + A + +GE+++ + GG+
Sbjct: 147 SVTGVAPAVASGRISYTMGLEGPSISVDTACSSSLVALHLAVESLRKGESSMAVVGGAAV 206
Query: 357 AVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAK 416
P F RAL+ S+ + DGF EG ++LLE L A++ G +
Sbjct: 207 MATPGVFVDFSRQRALA-----ADGRSKAFGAGADGFGFSEGVTLVLLERLSEARRNGHE 261
Query: 417 IYAEFRGGSFTSD--AYHMTEPH-PDGVGVILCIEKALAHSGVSREDVNYINAHATSTPA 473
+ A RG + D + ++ P P VI +AL G+ DV+ + AH T T
Sbjct: 262 VLAVVRGSALNQDGASNGLSAPSGPAQRRVI---RQALESCGLEPGDVDAVEAHGTGTAL 318
Query: 474 GDIKEYQALIHCFGQNRG----LRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNI 529
GD E AL+ +G++R L + S KS IGH AAG + VV A+R G + +
Sbjct: 319 GDPIEANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGELPATL 378
Query: 530 NLENPDAVVD---------TNVLVGPKKERLEVKAALSNSFGFGGHNSSII 571
++E P VD + ER +AA+S +FG G N+ +I
Sbjct: 379 HVEEPTPHVDWSSGGVALLAGNQPWRRGERTR-RAAVS-AFGISGTNAHVI 427
|
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Length = 965 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 8e-31
Identities = 106/442 (23%), Positives = 171/442 (38%), Gaps = 79/442 (17%)
Query: 167 VVVTGMGLVSPLGHEPDVFYNNLLEGVSGISE---------------------IETFDCT 205
VV+ GM P F++NL+ GV +++ + FD +
Sbjct: 6 VVIAGMSGKLPESENLQEFWDNLIGGVDMVTDDDRRWKAGLYGLPRRSGKLKDLSRFDAS 65
Query: 206 SFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKC 265
F G V PK + MD + LL +A+ DGGI + L +
Sbjct: 66 FF--------------G-VHPKQAHTMDPQLRLLLEVTYEAIVDGGI---NPDSLRGTHT 107
Query: 266 GVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAM---LAMDLGWMGPNYS 322
GV +G + EAL + + + + M L+ + GP+ +
Sbjct: 108 GVWVGVS------GSETSEALSRDPETLVGY---SMVGCQRAMMANRLSFFFDFRGPSIA 158
Query: 323 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKA 382
+ TAC++S + NA I G+ + GG + + P F+ LS P
Sbjct: 159 LDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRLGMLS-----PEGT 213
Query: 383 SRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYH---MTEPHPD 439
+ +D +G+ EG +LL + A+ ++YA +D + +T P
Sbjct: 214 CKAFDTAGNGYCRSEGVVAVLLTKKSLAR----RVYATILNAGTNTDGFKEQGVTFPS-- 267
Query: 440 GVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR--GLRVNST 497
G I +GV+ E YI AH T T GD +E + R L + ST
Sbjct: 268 GDIQEQLIRSLYQSAGVAPESFEYIEAHGTGTKVGDPQELNGITRALCATRQEPLLIGST 327
Query: 498 KSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENP----DAVVDTNVLVG----PKKE 549
KS +GH A+G V+ ++ G PN++ +P A++D + V P +
Sbjct: 328 KSNMGHPEPASGLAALAKVLLSLEHGLWAPNLHFHSPNPEIPALLDGRLQVVDQPLPVRG 387
Query: 550 RLEVKAALSNSFGFGGHNSSII 571
++ SFGFGG N II
Sbjct: 388 GN---VGIN-SFGFGGSNVHII 405
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 57.9 bits (139), Expect = 7e-09
Identities = 66/526 (12%), Positives = 125/526 (23%), Gaps = 167/526 (31%)
Query: 19 CMSFTCGSRDPHQPPSVLRRYTNNK-REGLSAARRRKLSAKCGVGGEVVNGSLVSSFSGS 77
+V R K R+ L R K GV G SG
Sbjct: 115 QRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLG-----------SGK 163
Query: 78 SHSIQSLMASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTAT----LNRRQRRLR 133
+ + + C Y F + NS T L + ++
Sbjct: 164 ---------TWVALDVCLSY----KVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQID 210
Query: 134 LNRVTRSGEAMAVAVQPDEEVTTKKKPHMKQKRVVVTGMGLVSPLGHEPDVFYNN---LL 190
N +RS + + + + + +K K Y N +L
Sbjct: 211 PNWTSRS-DHSSNIKLRIHSIQAELRRLLKSKP-------------------YENCLLVL 250
Query: 191 EGVSGISEIETFD--CTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALA 248
V F+ C KI LLT
Sbjct: 251 LNVQNAKAWNAFNLSC-----KI---------------------------LLTT-----R 273
Query: 249 DGGITEDVMNELDKSKCGVLIGSGLG---GMKVFYDAI----EALRISYKKMNPFCVPFA 301
+T+ + L + + + L NP +
Sbjct: 274 FKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRL--- 330
Query: 302 TTNMGSAMLAMDLG----WMGPNYS-ISTACATSNFCILNAANH--------IIRGEANV 348
++ + + L W N ++T +S +L A + + A++
Sbjct: 331 --SIIAESIRDGLATWDNWKHVNCDKLTTIIESS-LNVLEPAEYRKMFDRLSVFPPSAHI 387
Query: 349 ------MLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 402
++ + + + + +L ++ + S P I +
Sbjct: 388 PTILLSLIWFDVIKSDVMVVVNKLHK-YSLVEKQPKESTISIP-SIYLE----------- 434
Query: 403 LLEELE-----HAKKRGA-KIYAEFRGGSFTSD----------AYHMTEPHPDGVGVILC 446
L +LE H I F +H+ +
Sbjct: 435 LKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFR 494
Query: 447 --------IEKALAHSGVSREDVNYINAHATSTPA-GDIKEYQALI 483
+E+ + H + NA + +K Y+ I
Sbjct: 495 MVFLDFRFLEQKIRHDSTAW------NASGSILNTLQQLKFYKPYI 534
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 576 | |||
| 3ho9_A | 427 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, | 100.0 | |
| 1e5m_A | 416 | KAS II, beta ketoacyl acyl carrier protein synthas | 100.0 | |
| 4ewg_A | 412 | Beta-ketoacyl synthase; ssgcid, structural genomic | 100.0 | |
| 3o04_A | 413 | LMO2201 protein, beta-keto-acyl carrier protein sy | 100.0 | |
| 2gqd_A | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli | 100.0 | |
| 1j3n_A | 408 | 3-oxoacyl-(acyl-carrier protein) synthase II; cond | 100.0 | |
| 3kzu_A | 428 | 3-oxoacyl-(acyl-carrier-protein) synthase II; seat | 100.0 | |
| 2iwz_A | 438 | 3-oxoacyl-[acyl-carrier-protein] synthase; mitocho | 100.0 | |
| 2vba_A | 406 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop | 100.0 | |
| 3mqd_A | 428 | Beta-ketoacyl synthase; ssgcid, ALS collaborative | 100.0 | |
| 1ox0_A | 430 | Beta ketoacyl-acyl carrier protein synthase; trans | 100.0 | |
| 1tqy_A | 424 | Beta-ketoacyl synthase/acyl transferase; alpha-bet | 100.0 | |
| 1tqy_B | 415 | Actinorhodin polyketide putative beta-ketoacyl SY; | 100.0 | |
| 2gp6_A | 434 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol | 100.0 | |
| 2wge_A | 416 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta | 100.0 | |
| 4ddo_A | 451 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci | 100.0 | |
| 2ix4_A | 431 | 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke | 100.0 | |
| 3hhd_A | 965 | Fatty acid synthase; transferase, multienzyme, meg | 100.0 | |
| 2hg4_A | 917 | DEBS, 6-deoxyerythronolide B synthase; ketosynthas | 100.0 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 100.0 | |
| 2qo3_A | 915 | Eryaii erythromycin polyketide synthase modules 3; | 100.0 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 100.0 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 100.0 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 100.0 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 100.0 | |
| 1wdk_C | 390 | 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame | 100.0 | |
| 1wl4_A | 397 | Acetyl-coenzyme A acetyltransferase 2; thiolase fo | 100.0 | |
| 1ulq_A | 401 | Putative acetyl-COA acetyltransferase; structural | 100.0 | |
| 2wu9_A | 442 | 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o | 100.0 | |
| 2vu1_A | 392 | Acetyl-COA acetyltransferase; acyltransferase, PHB | 100.0 | |
| 2iik_A | 418 | 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m | 100.0 | |
| 1afw_A | 393 | 3-ketoacetyl-COA thiolase; fatty acid metabolism; | 100.0 | |
| 4dd5_A | 396 | Acetyl-COA acetyltransferase; structural genomics, | 100.0 | |
| 3ss6_A | 394 | Acetyl-COA acetyltransferase; structural genomics, | 100.0 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 99.98 | |
| 2ib8_A | 395 | Acetyl-COA acetyltransferase; thiolase fold, potas | 99.98 | |
| 3goa_A | 387 | 3-ketoacyl-COA thiolase; metabolism, fatty acid, p | 99.98 | |
| 1ub7_A | 322 | 3-oxoacyl-[acyl-carrier protein] synthase; fatty a | 99.97 | |
| 3svk_A | 407 | Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, | 99.97 | |
| 2ebd_A | 309 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.96 | |
| 1hnj_A | 317 | Beta-ketoacyl-acyl carrier protein synthase III; F | 99.96 | |
| 1mzj_A | 339 | Beta-ketoacylsynthase III; beta-ketosynthase, arom | 99.96 | |
| 1zow_A | 313 | 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB | 99.95 | |
| 4egv_A | 520 | Acetyl-COA acetyltransferase; NEW SUB-family, thio | 99.94 | |
| 1u6e_A | 335 | 3-oxoacyl-[acyl-carrier-protein] synthase III; tra | 99.94 | |
| 2x3e_A | 331 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, | 99.93 | |
| 1u0m_A | 382 | Putative polyketide synthase; type III polyketide | 99.93 | |
| 2h84_A | 374 | Steely1; thiolase-fold, type III polyketide syntha | 99.92 | |
| 3tsy_A | 979 | Fusion protein 4-coumarate--COA ligase 1, resvera | 99.9 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 99.88 | |
| 1ted_A | 393 | PKS18; thiolase fold, substrate binding tunnel, tr | 99.88 | |
| 4dfe_A | 333 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci | 99.86 | |
| 2d3m_A | 406 | Pentaketide chromone synthase; chalcone synthase, | 99.79 | |
| 3led_A | 392 | 3-oxoacyl-acyl carrier protein synthase III; struc | 99.77 | |
| 3gwa_A | 365 | 3-oxoacyl-(acyl-carrier-protein) synthase III; str | 99.75 | |
| 1xpm_A | 396 | 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s | 99.74 | |
| 3a5r_A | 387 | Benzalacetone synthase; chalcone synthase, type II | 99.74 | |
| 1xes_A | 413 | Dihydropinosylvin synthase; native structure, tran | 99.73 | |
| 3il3_A | 323 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.73 | |
| 1ee0_A | 402 | 2-pyrone synthase; polyketide synthase, thiolase f | 99.72 | |
| 1i88_A | 389 | CHS2, chalcone synthase 2; polyketide synthase, tr | 99.71 | |
| 3s3l_A | 357 | CERJ; acyltransferase, FABH homologue, KS III homo | 99.69 | |
| 3awk_A | 402 | Chalcone synthase-like polyketide synthase; type I | 99.69 | |
| 3il6_A | 321 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.68 | |
| 2p0u_A | 413 | Stilbenecarboxylate synthase 2; polyketide synthas | 99.68 | |
| 3ov2_A | 393 | Curcumin synthase; type III polyketide synthase, t | 99.68 | |
| 3h78_A | 359 | PQS biosynthetic enzyme; PQSD, anthranilic acid, a | 99.67 | |
| 4efi_A | 354 | 3-oxoacyl-(acyl-carrier protein) synthase; structu | 99.66 | |
| 2f82_A | 450 | HMG-COA synthase; HMGS1, transferase; 2.10A {Brass | 99.64 | |
| 4ewp_A | 350 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans | 99.64 | |
| 3oit_A | 387 | OS07G0271500 protein; type III polyketide synthase | 99.64 | |
| 3e1h_A | 465 | PKSIIINC, putative uncharacterized protein; resorc | 99.58 | |
| 3euo_A | 379 | Type III pentaketide synthase; alpha helix, acyltr | 99.56 | |
| 3lma_A | 347 | Stage V sporulation protein AD (spovad); NESG, str | 99.44 | |
| 3v4n_A | 388 | HMG-COA synthase; hydroxymethylglutaryl-COA syntha | 99.43 | |
| 3v7i_A | 413 | Putative polyketide synthase; type III polyketide | 99.43 | |
| 3sqz_A | 425 | Putative hydroxymethylglutaryl-COA synthase; thiol | 99.38 | |
| 2p8u_A | 478 | Hydroxymethylglutaryl-COA synthase, cytoplasmic; h | 99.35 | |
| 2v4w_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 99.28 | |
| 2wya_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 98.96 | |
| 2ju1_A | 95 | Erythronolide synthase; carrier protein domain, mo | 97.96 | |
| 2cg5_B | 91 | Fatty acid synthase; transferase-hydrolase complex | 97.95 | |
| 2afd_A | 88 | Protein ASL1650; twisted antiparallel helical bund | 97.74 | |
| 2kr5_A | 89 | PKS, aflatoxin biosynthesis polyketide synthase; a | 97.56 | |
| 4i4d_A | 93 | Peptide synthetase NRPS type II-PCP; structural ge | 97.54 | |
| 1nq4_A | 95 | Oxytetracycline polyketide synthase acyl carrier p | 97.48 | |
| 2liu_A | 99 | CURA; holo state, transferase; NMR {Lyngbya majusc | 97.43 | |
| 2l22_A | 212 | Mupirocin didomain acyl carrier protein; biosynthe | 97.41 | |
| 1dny_A | 91 | Non-ribosomal peptide synthetase peptidyl carrier | 97.19 | |
| 2l22_A | 212 | Mupirocin didomain acyl carrier protein; biosynthe | 96.97 | |
| 2l3v_A | 79 | ACP, acyl carrier protein; structural genomi seatt | 96.89 | |
| 1l0i_A | 78 | Acyl carrier protein; acyl chain binding, fatty ac | 96.86 | |
| 2ava_A | 82 | ACP I, acyl carrier protein I, chloroplast; four-h | 96.81 | |
| 2dnw_A | 99 | Acyl carrier protein; ACP, fatty acid biosynthesis | 96.8 | |
| 1or5_A | 83 | Acyl carrier protein; ACP, biosynthesis, frenolici | 96.78 | |
| 2ehs_A | 77 | ACP, acyl carrier protein; lipid transport, struct | 96.76 | |
| 2lol_A | 81 | ACP, acyl carrier protein; lipid transport; NMR {R | 96.76 | |
| 1af8_A | 86 | Actinorhodin polyketide synthase acyl carrier Pro; | 96.74 | |
| 1x3o_A | 80 | Acyl carrier protein; structural genomics, riken s | 96.57 | |
| 1klp_A | 115 | ACP, ACPM, meromycolate extension acyl carrier pro | 96.45 | |
| 2cnr_A | 82 | FAS, ACP, acyl carrier protein; polykdetide, phosp | 96.42 | |
| 2kjs_A | 87 | Putative acyl carrier protein; alpha, ACP, PNS, st | 96.3 | |
| 2cq8_A | 110 | 10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH | 96.25 | |
| 2qnw_A | 82 | Acyl carrier protein; malaria, SGC, structural gen | 96.21 | |
| 2kwl_A | 84 | ACP, acyl carrier protein; structural genomics, se | 96.15 | |
| 1f80_D | 81 | Acyl carrier protein; transferase; HET: PN2; 2.30A | 96.15 | |
| 3gzm_A | 81 | Acyl carrier protein; helix bundle, phosphopanteth | 96.14 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 95.87 | |
| 1vku_A | 100 | Acyl carrier protein; TM0175, structural genomics, | 95.85 | |
| 2lte_A | 103 | Specialized acyl carrier protein; APO protein, tra | 94.83 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 95.45 | |
| 2l4b_A | 88 | Acyl carrier protein; infectious disease, human gr | 95.31 | |
| 3ejb_A | 97 | Acyl carrier protein; protein-protein complex, cyt | 94.89 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 94.84 | |
| 2kw2_A | 101 | Specialized acyl carrier protein; structural genom | 94.54 | |
| 4dxe_H | 101 | ACP, acyl carrier protein; acyl-carrier-protein sy | 94.12 | |
| 4dg8_A | 620 | PA1221; ANL superfamily, adenylation domain, pepti | 93.88 | |
| 1fh1_A | 92 | NODF, nodulation protein F; ROOT nodulation factor | 93.82 | |
| 2jq4_A | 105 | AGR_C_4658P, hypothetical protein ATU2571; ATC2521 | 93.27 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 93.0 | |
| 3rg2_A | 617 | Enterobactin synthase component E (ENTE), 2,3-DIH | 92.47 | |
| 2jgp_A | 520 | Tyrocidine synthetase 3; multifunctional enzyme, a | 91.35 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 90.48 | |
| 2fq1_A | 287 | Isochorismatase; ENTB, NRPS, multi-domain, ACP, hy | 89.62 | |
| 3ce7_A | 107 | Specific mitochodrial acyl carrier protein; malari | 88.85 | |
| 2amw_A | 83 | Hypothetical protein NE2163; all helical protein, | 88.17 | |
| 2cgq_A | 113 | Acyl carrier protein ACPA; RV0033, protein transpo | 86.79 | |
| 1dv5_A | 80 | APO-DCP, APO-D-alanyl carrier protein; 3-helix bun | 82.26 |
| >3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-79 Score=656.05 Aligned_cols=412 Identities=45% Similarity=0.750 Sum_probs=384.0
Q ss_pred CCCCCCcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHH
Q 008146 160 PHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYL 239 (576)
Q Consensus 160 ~~~~~~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~ 239 (576)
+...+++|+|||||+++|+|.++++||++|++|+++|+++++|+...++.++++++++||..+||++++++.|||+++|+
T Consensus 13 ~~~~~~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~i~~~~~~~~d~~~~l~ 92 (427)
T 3ho9_A 13 ACVSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDIISRKEQRKMDAFIQYG 92 (427)
T ss_dssp ----CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTCSCCEEECCSSCCCTTTSCHHHHTTSCHHHHHH
T ss_pred CCCCCCCEEEEeeeEECCCCCCHHHHHHHHHcCCCceeeCCccccccCccceeeEcCCCChhhcCCHHHHhhCCHHHHHH
Confidence 34456789999999999999999999999999999999999999988999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHH-HhhhccCCCccccccccchhHHHHHHHhCCCC
Q 008146 240 LTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMG 318 (576)
Q Consensus 240 l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G 318 (576)
++++++||+|||++++ +++..++|||+|++.+++....+.+..+ .......+|+.++....+..++++++.||++|
T Consensus 93 l~aa~~AL~dAGl~~~---~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~G 169 (427)
T 3ho9_A 93 IVAGVQAMQDSGLEIT---EENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRG 169 (427)
T ss_dssp HHHHHHHHHHHTCCCC---TTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHCCCCcc---cccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHHHHHHHhCCCC
Confidence 9999999999999987 5678899999999999888777766655 44567788999999999999999999999999
Q ss_pred ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCc
Q 008146 319 PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEG 398 (576)
Q Consensus 319 p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEG 398 (576)
|+++|+++|+|++.||++|+++|++|+||++||||+|.+++|..+..|...++++..+.+|++.|+|||.+++|+++|||
T Consensus 170 p~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~v~geG 249 (427)
T 3ho9_A 170 PSISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDG 249 (427)
T ss_dssp CEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTCCSBCBBCE
T ss_pred CeecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhccCcccCCCCCCcccCCccCCCCCceeeee
Confidence 99999999999999999999999999999999999999999999999999999998777788899999999999999999
Q ss_pred eEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHH
Q 008146 399 AGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKE 478 (576)
Q Consensus 399 AaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E 478 (576)
++++||+++++|+++|++||++|+|++.++|+++.+.+.+++.++.++++++|+++|++++||||||+|||||+.+|+.|
T Consensus 250 AaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~HgtgT~~~d~~e 329 (427)
T 3ho9_A 250 AGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAE 329 (427)
T ss_dssp EEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSBTTBCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHH
T ss_pred EEEEEEccHHHHHHCCCcEEEEEEEEeecCCCCCcCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEecCCcCCCcCHHH
Confidence 99999999999999999999999999999999999999889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCC-CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccc-CccEE
Q 008146 479 YQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERL-EVKAA 556 (576)
Q Consensus 479 ~~Al~~~f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~-~~~~a 556 (576)
..++.++|+.. .++++++.|+++||++||||++++++++++|++++|||++|+++|++.++++++. ...+++ .++++
T Consensus 330 ~~a~~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a 408 (427)
T 3ho9_A 330 AQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVP-HEARQVSGMEYT 408 (427)
T ss_dssp HHHHHHHHGGGGGTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCCBCCB-SSCEECSSCCEE
T ss_pred HHHHHHHhcccCCCeEEecchHhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccccc-cccccCCCCCEE
Confidence 99999999864 4689999999999999999999999999999999999999999999999988644 334455 78999
Q ss_pred EEeccCCCcceeEEEEeeC
Q 008146 557 LSNSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 557 lv~sfG~gG~na~vil~~~ 575 (576)
++|||||||+|+|+||++|
T Consensus 409 ~~~sfGfgG~na~~vl~~~ 427 (427)
T 3ho9_A 409 LCNSFGFGGTNGSLIFKKI 427 (427)
T ss_dssp EEEEEETTTEEEEEEEECC
T ss_pred EEeCccCCceeEEEEEEeC
Confidence 9999999999999999987
|
| >1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-79 Score=652.22 Aligned_cols=411 Identities=45% Similarity=0.766 Sum_probs=381.1
Q ss_pred CCCCcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHH
Q 008146 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLT 241 (576)
Q Consensus 162 ~~~~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~ 241 (576)
+.+++|+|||||+++|.|.++++||++|.+|+++++++++|+...++.++.+++++||+.++|++++++.|||+++|+++
T Consensus 4 ~~m~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~i~~fd~~~~~~~~~~~~~d~~~~l~l~ 83 (416)
T 1e5m_A 4 LEKKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQFLDRKEAKRMDRFCHFAVC 83 (416)
T ss_dssp --CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCCSCCGGGTSCHHHHHTSCHHHHHHHH
T ss_pred CCCCCEEEEeeeEECCCCCCHHHHHHHHHcCCCeEeeCCccccccCccceeEEeCCCCccccCCHHHHHhcCHHHHHHHH
Confidence 34678999999999999999999999999999999999999988888889999999999889999999999999999999
Q ss_pred HHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHH-HhhhccCCCccccccccchhHHHHHHHhCCCCcc
Q 008146 242 AGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPN 320 (576)
Q Consensus 242 aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~ 320 (576)
++++||+|||++++ ++++.|+|||+|++.+++....+.+..+ ..+....+|+.++....+..+.++++.||++||+
T Consensus 84 aa~~Al~dAg~~~~---~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~ 160 (416)
T 1e5m_A 84 ASQQAINDAKLVIN---ELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPN 160 (416)
T ss_dssp HHHHHHHHHTCCCC---TTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCE
T ss_pred HHHHHHHHcCCChh---hcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCCCCce
Confidence 99999999999986 5677899999999998887766666554 3455678888888888999999999999999999
Q ss_pred ccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceE
Q 008146 321 YSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 400 (576)
Q Consensus 321 ~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAa 400 (576)
++|+++|+|++.||++|+++|++|+||++||||+|.++++..+.+|..+++++..+.+|++.|||||.+++|+++|||++
T Consensus 161 ~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~geGaa 240 (416)
T 1e5m_A 161 NCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRDGFVMGEGSG 240 (416)
T ss_dssp ECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCGGGTCCTTBTTCCSBCBBCEEE
T ss_pred eCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcCCccCCCCCCccccccCccCCCCceeeeeEE
Confidence 99999999999999999999999999999999999988999999999999998766678899999999999999999999
Q ss_pred EEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHH
Q 008146 401 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQ 480 (576)
Q Consensus 401 alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~ 480 (576)
++||+++++|+++|++||++|+|++.++|+++++.|.|++.++.++|+++|+++|++++||||||+|+|||+++|++|.+
T Consensus 241 avvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~Hgtgt~~~D~~E~~ 320 (416)
T 1e5m_A 241 ILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETR 320 (416)
T ss_dssp EEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHH
T ss_pred EEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhHCCEEEEECCCCcCcCHHHHH
Confidence 99999999999999999999999999999999888888999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCC-CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEe
Q 008146 481 ALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSN 559 (576)
Q Consensus 481 Al~~~f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~ 559 (576)
+|.++|+.. .+++|+++|+++||+++|+|++++++++++|++++|||++|+++|+|.++++++. .+.+++.++++++|
T Consensus 321 al~~~~g~~~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~-~~~~~~~~~~a~~~ 399 (416)
T 1e5m_A 321 AIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDYVP-GQSRALIVDVALSN 399 (416)
T ss_dssp HHHHHHGGGGGGSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCSCCCB-SSCEECCCSEEEEE
T ss_pred HHHHHHcccCCCCeeeCcchhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccC-CccccCCCCEEEEc
Confidence 999999864 3589999999999999999999999999999999999999999999999887643 34556778999999
Q ss_pred ccCCCcceeEEEEeeCC
Q 008146 560 SFGFGGHNSSIIFSPYK 576 (576)
Q Consensus 560 sfG~gG~na~vil~~~~ 576 (576)
||||||+|+|+||++|+
T Consensus 400 sfGfGG~n~~~vl~~~~ 416 (416)
T 1e5m_A 400 SFGFGGHNVTLAFKKYQ 416 (416)
T ss_dssp EEETTTEEEEEEEECCC
T ss_pred cccCCCeeEEEEEEeCC
Confidence 99999999999999985
|
| >4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-78 Score=648.04 Aligned_cols=405 Identities=32% Similarity=0.494 Sum_probs=377.6
Q ss_pred CCCcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCC-CCCccccccccCCCCCCCCChhhhhcCCHHHHHHHH
Q 008146 163 KQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCT-SFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLT 241 (576)
Q Consensus 163 ~~~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~-~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~ 241 (576)
.+++|+|||||+++|.|.+.++||++|.+|++++++++.|+.. .++.++.+++++||+.+||++++.+.|||+++|+++
T Consensus 4 ~m~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~v~~fd~~~~i~~~~~~~~d~~~~l~l~ 83 (412)
T 4ewg_A 4 SMKRVVITGMGGVTALGSRWDEIEAALKAGRNAVRRMPDWDYFESLHTRLAAPLPGFAQPADWPRKKTRSMGRVSMYAVR 83 (412)
T ss_dssp CCCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCCEECGGGGGSSSCCCCEEBCCSCCCCCTTSCHHHHTTCCHHHHHHHH
T ss_pred CCCEEEEEeeEEECCCcCCHHHHHHHHHcCCCceeeCCccccccCCccceeeecCCCChhhhCCHHHHhhCCHHHHHHHH
Confidence 3678999999999999999999999999999999999998876 678888999999999999999999999999999999
Q ss_pred HHHHHHHhCCC-ChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHH-hhhccCCCccccccccchhHHHHHHHhCCCCc
Q 008146 242 AGKKALADGGI-TEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALR-ISYKKMNPFCVPFATTNMGSAMLAMDLGWMGP 319 (576)
Q Consensus 242 aa~eAL~dAGi-~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp 319 (576)
++++||+|||+ +++ +++..++|||+|++.+++....+++..+. .+....+++.++....+..+.++++.||++||
T Consensus 84 aa~~Al~dAGl~~~~---~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp 160 (412)
T 4ewg_A 84 ASELALADAGFAGDE---SISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWDLKGR 160 (412)
T ss_dssp HHHHHHHHHTCTTCG---GGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHHTTCCSC
T ss_pred HHHHHHHhcCCCCcc---ccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHHhCCCCC
Confidence 99999999999 655 56789999999999999888888777664 45567788888899999999999999999999
Q ss_pred cccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCce
Q 008146 320 NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGA 399 (576)
Q Consensus 320 ~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGA 399 (576)
+++|+++|+|++.||++|+++|++|+||++||||+|. +++..+..|..++.++....+|++.|||||.+++|+++|||+
T Consensus 161 ~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~-~s~~~~~~~~~~~~l~~~~~~p~~~~rpfd~~~~G~~~geGA 239 (412)
T 4ewg_A 161 IVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEE-LSGPAVAVFDTLYATSTRNDEPHLTPRPFDAKRDGLVVGEGA 239 (412)
T ss_dssp EEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHTTTCBCCCTTCGGGCCCTTBTTCCCBCBBCEE
T ss_pred cccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccc-CCHHHHHHHHHhhccccCCCCCCCCCCCCCCCCCCCceECeE
Confidence 9999999999999999999999999999999999999 888889999999999987788899999999999999999999
Q ss_pred EEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHH
Q 008146 400 GVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEY 479 (576)
Q Consensus 400 aalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~ 479 (576)
+++||+++++|+++|++||++|+|+++++|+++++. |++.++.++|+++|+++|++++||||||+|||||+++|++|.
T Consensus 240 aavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~--p~~~~~~~ai~~Al~~Agl~~~dId~ve~Hgtgt~~~D~~E~ 317 (412)
T 4ewg_A 240 ATLVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQ--PTASTMARAMQLALEDAKLDANAIAYVNAHGTSTDRGDVAES 317 (412)
T ss_dssp EEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSS--CCHHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCHHHHHHHH
T ss_pred EEEEEccHHHHhhCCCcEEEEEEEEEEcCCCCCCCC--CCHHHHHHHHHHHHHHcCCCHHHCCEEEccCCCCccccHHHH
Confidence 999999999999999999999999999999998765 478899999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCC-CcccccCCcccccCccEEEE
Q 008146 480 QALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVV-DTNVLVGPKKERLEVKAALS 558 (576)
Q Consensus 480 ~Al~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~-~~~~~~~~~~~~~~~~~alv 558 (576)
+++.++|+.. ++|++.|+++||++||+|++++++++++|++++|||++|+++|++.+ +++++. .+.+.++++++++
T Consensus 318 ~al~~~~~~~--~~v~s~K~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~~~~v~-~~~~~~~~~~~~~ 394 (412)
T 4ewg_A 318 QATARTFGER--MPISSLKSYVGHTLGACGALEAWWTIEMMKRNWYAPTLNLTEVDPACAPLDYIR-GEARAIDAEYVMS 394 (412)
T ss_dssp HHHHHHHCTT--CEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTSCCCEECC-SSCEECCCSEEEE
T ss_pred HHHHHHcCCC--CeeeCccccccccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCccccccccc-CcccCCCCCEEEE
Confidence 9999999865 89999999999999999999999999999999999999999999999 777543 3455677899999
Q ss_pred eccCCCcceeEEEEeeCC
Q 008146 559 NSFGFGGHNSSIIFSPYK 576 (576)
Q Consensus 559 ~sfG~gG~na~vil~~~~ 576 (576)
|||||||+|+|+||++|+
T Consensus 395 ~sfgfGG~na~~vl~~~~ 412 (412)
T 4ewg_A 395 NNFAFGGINTSLIFRRVR 412 (412)
T ss_dssp EEEEGGGEEEEEEEECCC
T ss_pred eeecCCcceEEEEEeeCC
Confidence 999999999999999985
|
| >3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-78 Score=645.39 Aligned_cols=410 Identities=42% Similarity=0.747 Sum_probs=383.7
Q ss_pred CCCCcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHH
Q 008146 162 MKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLT 241 (576)
Q Consensus 162 ~~~~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~ 241 (576)
|++++|+|||||+++|.|.++++||++|.+|+++++++++|+...++..+.+++++||+.+||++++++.|||+++|+++
T Consensus 1 M~~~~v~ItG~g~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~i~~~~~~~~d~~~~l~l~ 80 (413)
T 3o04_A 1 MDKRRVVVTGIGAVTPIGNDAETSWENAKKGVNGVAKMTRLNPDDFPVKIAAELKDFDVEKYLEKKEARKMDRFTHYAIA 80 (413)
T ss_dssp CCCCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCGGGSSCCEEECCSSCCGGGTSCHHHHTTSCHHHHHHHH
T ss_pred CCCCCEEEEEeEEECCCCCCHHHHHHHHHcCCCceeeCCccccccCccccccccCCCChhhccCHHHHhhCCHHHHHHHH
Confidence 45678999999999999999999999999999999999999988888889999999999999999999999999999999
Q ss_pred HHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHH-HhhhccCCCccccccccchhHHHHHHHhCCCCcc
Q 008146 242 AGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPN 320 (576)
Q Consensus 242 aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~ 320 (576)
++++||+|||++++ ++++.|+|||+|++.+++......+..+ ..+....+|+.++....++.+.++++.||++||+
T Consensus 81 Aa~~AL~dAGl~~~---~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~ 157 (413)
T 3o04_A 81 SAEMAVQDSGLVID---DSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGAKGIN 157 (413)
T ss_dssp HHHHHHHHHTCCCC---TTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHTCCSCE
T ss_pred HHHHHHHHcCCChh---HcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhCCCCcc
Confidence 99999999999987 6778999999999999988877777665 3456677888889999999999999999999999
Q ss_pred ccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceE
Q 008146 321 YSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 400 (576)
Q Consensus 321 ~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAa 400 (576)
++|+++|+|++.||+.|+++|++|+||++||||+|.++++..+..|...+.++. ..+|++.|+|||.+++|+++|||++
T Consensus 158 ~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~~~~~~~~~~~ls~-~~~p~~~~~pfd~~~~g~~~gdGAa 236 (413)
T 3o04_A 158 STTVTACATATNSIGDAFKVIERGDADAMITGGAEAPITKMSLAGFTANKALSL-NPDPETACRPFDKDRDGFIIGEGAG 236 (413)
T ss_dssp ECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCC-CCCTTTSCCTTBTTCCSBCBBCEEE
T ss_pred eeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHHHHHHHHhcccccC-CCCCCCCcCCCcCCCCCceEeccEE
Confidence 999999999999999999999999999999999999999999999999999985 4558899999999999999999999
Q ss_pred EEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHH
Q 008146 401 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQ 480 (576)
Q Consensus 401 alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~ 480 (576)
++||+++++|+++|++||++|+|++.++|+++.+.+.|++.++.++++++|+++|++++||||||+|||||+++|++|.+
T Consensus 237 avvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~ve~HgtgT~~~d~~e~~ 316 (413)
T 3o04_A 237 IVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKMAIDDAGLTPDKVDYINAHGTSTPYNDEYETQ 316 (413)
T ss_dssp EEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHHHHHH
T ss_pred EEEEeeHHHHHhCCCeEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcccCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCC-CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEe
Q 008146 481 ALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSN 559 (576)
Q Consensus 481 Al~~~f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~ 559 (576)
+|.++|+.. .++++++.|+++||++||+|++++++++++|++++|||++|+++|++.+++++.. .+.+...++++++|
T Consensus 317 al~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 395 (413)
T 3o04_A 317 AIKTVFGEHAKKLAISSTKSMTGHTLGASGGIEAIFALLTIRDNIIAPTIHLKNQDEVCDLDYVP-NEAREANVNVVISN 395 (413)
T ss_dssp HHHHHHGGGTTTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSBCSSCCSCCCB-SSCEECCCCEEEEE
T ss_pred HHHHHhcccCCCCceecccccccccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCcccCC-CcccCCCCCEEEEe
Confidence 999999864 4689999999999999999999999999999999999999999999999987644 33455678999999
Q ss_pred ccCCCcceeEEEEeeCC
Q 008146 560 SFGFGGHNSSIIFSPYK 576 (576)
Q Consensus 560 sfG~gG~na~vil~~~~ 576 (576)
||||||+|+|+||++|+
T Consensus 396 sfgfgG~na~~vl~~~~ 412 (413)
T 3o04_A 396 SFGFGGHNATLVFKRIE 412 (413)
T ss_dssp EEETTTEEEEEEEECCC
T ss_pred CccCCceEEEEEEEeCC
Confidence 99999999999999985
|
| >2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-77 Score=644.55 Aligned_cols=407 Identities=42% Similarity=0.735 Sum_probs=378.1
Q ss_pred CcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 008146 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 244 (576)
Q Consensus 165 ~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa~ 244 (576)
++|+|||||+++|+|.++++||++|.+|+++|+++++|+...++.+..+++++||+.++|++++++.|||+++|++++++
T Consensus 28 ~~vaI~G~g~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~i~~fd~~~~~~~~~~~~~d~~~~l~l~aa~ 107 (437)
T 2gqd_A 28 KRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDHIDKKEARRMDRFTQYAIVAAR 107 (437)
T ss_dssp CCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCSSCCGGGTSCSTTTTTSCHHHHHHHHHHH
T ss_pred CCEEEEEeeEECCCCCCHHHHHHHHHcCCCceeeCCccccccCccceeEEeCCCChhcCCCHHHHHhcCHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999988888889999999999888999999999999999999999
Q ss_pred HHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHH-HhhhccCCCccccccccchhHHHHHHHhCCCCccccc
Q 008146 245 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 323 (576)
Q Consensus 245 eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv 323 (576)
+||+|||++++ ++++.|+|||+|++.+++....+.+..+ ..+....+|+.++....+..+.++++.||++||+++|
T Consensus 108 ~AL~dAGl~~~---~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~~~v 184 (437)
T 2gqd_A 108 EAVKDAQLDIN---ENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGAT 184 (437)
T ss_dssp HHHHHHTCCCC---TTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSSEECB
T ss_pred HHHHHcCCCcc---ccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhCCCCceEEe
Confidence 99999999986 5678899999999998887766666554 3455678888888888899999999999999999999
Q ss_pred cCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceEEEE
Q 008146 324 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 403 (576)
Q Consensus 324 ~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAaalv 403 (576)
+++|+|++.||++|+++|++|+||+|||||+|.+++|..+.+|..++.++. +.+|++.|+|||.+++|+++|||++++|
T Consensus 185 ~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~-~~~p~~~~~pfd~~~~G~v~geGaaavv 263 (437)
T 2gqd_A 185 VTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALST-NDDIETACRPFQEGRDGFVMGEGAGILV 263 (437)
T ss_dssp CCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCC-CCCTTTSSCTTCTTCCSBCBBCEEEEEE
T ss_pred cCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCccC-CCCCccccCCCCCCCCCceeeceEEEEE
Confidence 999999999999999999999999999999999889999999999999885 3458889999999999999999999999
Q ss_pred EcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHH
Q 008146 404 LEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALI 483 (576)
Q Consensus 404 L~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~ 483 (576)
|+++++|+++|++||++|+|++.++|+++++.|.|++.++.++|+++|+++|++|+||||||+|+|||+++|++|.++|.
T Consensus 264 L~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve~HgtgT~~~D~~E~~al~ 343 (437)
T 2gqd_A 264 IESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIK 343 (437)
T ss_dssp EEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHH
T ss_pred ECcHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhhCCEEEEECCCCcCcCHHHHHHHH
Confidence 99999999999999999999999999999888888899999999999999999999999999999999999999999999
Q ss_pred HHHcCC-CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccC
Q 008146 484 HCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFG 562 (576)
Q Consensus 484 ~~f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG 562 (576)
++|+.. .+++|+++|+++||+++|+|++++++++++|+++.+||++|+++|++.++++++. .+.+.+.++++++||||
T Consensus 344 ~~fg~~~~~~~v~s~k~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~-~~~~~~~~~~a~~~sfG 422 (437)
T 2gqd_A 344 NTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVP-NEAQDLDITYAMSNSLG 422 (437)
T ss_dssp HHHGGGGTSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSCCSSCCSBCCB-SSCEECCCSEEEEEEEC
T ss_pred HHHhccCCCceeecchhhhcCChhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccCC-CccccCCCCEEEEccCc
Confidence 999864 4689999999999999999999999999999999999999999999999887643 34556678999999999
Q ss_pred CCcceeEEEEeeCC
Q 008146 563 FGGHNSSIIFSPYK 576 (576)
Q Consensus 563 ~gG~na~vil~~~~ 576 (576)
|||+|+|+||++|+
T Consensus 423 fGG~na~~vl~~~~ 436 (437)
T 2gqd_A 423 FGGHNAVLVFKKFE 436 (437)
T ss_dssp GGGEEEEEEEECCC
T ss_pred CCCeeEEEEEEecc
Confidence 99999999999985
|
| >1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-78 Score=642.98 Aligned_cols=405 Identities=47% Similarity=0.800 Sum_probs=379.1
Q ss_pred CcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 008146 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 244 (576)
Q Consensus 165 ~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa~ 244 (576)
++|+|||||+++|+|.++++||++|.+|+++|+++++|+...++.++.+++ +||+.+|+++++.++|||+++|++++++
T Consensus 2 ~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~-~fd~~~~~~~~~~~~~d~~~~l~~~aa~ 80 (408)
T 1j3n_A 2 RRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITRFDASALPVRIAAEV-DVDPGAYLDRKELRRLDRFVQYALIAAQ 80 (408)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECC-CCCGGGTSCHHHHTTSCHHHHHHHHHHH
T ss_pred CCEEEEEeEEECCCCCCHHHHHHHHHcCCCeeeeccccCcccCccceEEEE-ccChhhcCCHHHHHhcCHHHHHHHHHHH
Confidence 579999999999999999999999999999999999999888888888999 8999989999999999999999999999
Q ss_pred HHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHH-HhhhccCCCccccccccchhHHHHHHHhCCCCccccc
Q 008146 245 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 323 (576)
Q Consensus 245 eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv 323 (576)
+||+|||++++ +++..++||++|++.+++....+++..+ ..+....+|+.++....+..+.++++.||++||+++|
T Consensus 81 ~AL~dAGl~~~---~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp~~~v 157 (408)
T 1j3n_A 81 LALEDAGLKPE---DLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTV 157 (408)
T ss_dssp HHHHHHTCCGG---GSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCBCCB
T ss_pred HHHHHcCCCcc---ccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHHhCCCCceeCc
Confidence 99999999987 6678899999999999887776666555 3455678888888888899999999999999999999
Q ss_pred cCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceEEEE
Q 008146 324 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 403 (576)
Q Consensus 324 ~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAaalv 403 (576)
+++|+|++.||++|+++|++|+||++||||+|.+++|..+.+|...+.++..+.+|++.|||||.+++|+++|||++++|
T Consensus 158 ~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~dg~v~geGaaavv 237 (408)
T 1j3n_A 158 VTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRDGFVMGEGAGVLV 237 (408)
T ss_dssp CCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTCCCBCBBCEEEEEE
T ss_pred cCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhcccccCCCCCCCcCcccCcCCCCceEEeeeEEEEE
Confidence 99999999999999999999999999999999989999999999999999877778889999999999999999999999
Q ss_pred EcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHH
Q 008146 404 LEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALI 483 (576)
Q Consensus 404 L~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~ 483 (576)
|+++++|+++|++||++|+|++.++|+++.+.|.|++.++.++|+++|+++|++++||||||+|+|||++||++|.+++.
T Consensus 238 L~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~gD~~E~~al~ 317 (408)
T 1j3n_A 238 LEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIK 317 (408)
T ss_dssp EEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHH
T ss_pred EeeHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHHH
Confidence 99999999999999999999999999999988888999999999999999999999999999999999999999999999
Q ss_pred HHHcCC-CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccC
Q 008146 484 HCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFG 562 (576)
Q Consensus 484 ~~f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG 562 (576)
++|+.. .+++++++|+++||+++|+|++++++++++|++++|||++|+++|+|.++++++. +.++++++++++||||
T Consensus 318 ~~~g~~~~~~~v~s~k~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~v~--~~~~~~~~~a~~~sfG 395 (408)
T 1j3n_A 318 RVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDFVP--EPREAKVDYALSNSFA 395 (408)
T ss_dssp HHHHHHHTTCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCSBCCS--SCEECCCSEEEEEEEC
T ss_pred HHhcCcCCCceEECchhhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccCC--CCcCCCCCEEEEeccc
Confidence 999853 4689999999999999999999999999999999999999999999999887644 4566788999999999
Q ss_pred CCcceeEEEEeeC
Q 008146 563 FGGHNSSIIFSPY 575 (576)
Q Consensus 563 ~gG~na~vil~~~ 575 (576)
|||+|+|+||++|
T Consensus 396 fGG~na~~vl~~~ 408 (408)
T 1j3n_A 396 FGGHNAVLAFKRV 408 (408)
T ss_dssp TTSEEEEEEEECC
T ss_pred CCcceEEEEEecC
Confidence 9999999999986
|
| >3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-77 Score=641.14 Aligned_cols=409 Identities=43% Similarity=0.714 Sum_probs=380.2
Q ss_pred CCCcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCCCcccccccc-------CCCCCCCCChhhhhcCCHH
Q 008146 163 KQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIK-------SFSTDGWVAPKLSKRMDKF 235 (576)
Q Consensus 163 ~~~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~-------~fd~~~~i~~~~a~~mdp~ 235 (576)
.+++|||||||+++|.|.++++||++|++|+++|+++++|+...++..+.++++ +||+.+||++++++.|||+
T Consensus 8 ~~~~~viTG~G~vsp~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~ 87 (428)
T 3kzu_A 8 HMRRVVITGLGLVSPLASGVEETWKRLLAGESGARRVTEFEVDDLACQIACRIPVGDGTNGTFNPDLHMDPKEQRKVDPF 87 (428)
T ss_dssp -CCCEEEEEEEEECSSCBSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCCBSSSSTTCBCGGGTSCHHHHTTSCHH
T ss_pred cccceEEEeceEECCCcCCHHHHHHHHHcCCCeeeeCCccccccCcCceeeEecccccccccCChhhcCCHHHHHhCCHH
Confidence 478999999999999999999999999999999999999999888888888887 8999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhc-ccCCeeEEEEcccCCchhHHHHHHHHHH-hhhccCCCccccccccchhHHHHHHH
Q 008146 236 MLYLLTAGKKALADGGITEDVMNE-LDKSKCGVLIGSGLGGMKVFYDAIEALR-ISYKKMNPFCVPFATTNMGSAMLAMD 313 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~-~~~~r~gV~vG~~~g~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~a~~ia~~ 313 (576)
++|+++++++||+|||++++ + ++..++|||+|++.+++....+++..+. .+...++|+.++....++.++++++.
T Consensus 88 ~~l~l~aa~~AL~dAGl~~~---~~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 164 (428)
T 3kzu_A 88 IVYAVGAADQALDDAGWHPE---NDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIK 164 (428)
T ss_dssp HHHHHHHHHHHHHHHTCCCC---SHHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCChh---hhccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccchhhhHHHHHHHH
Confidence 99999999999999999986 3 5567999999999998887777766663 45677899999999999999999999
Q ss_pred hCCCCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhcc-CCCCCCCCCCCccCCCc
Q 008146 314 LGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR-NNDPTKASRPWDINRDG 392 (576)
Q Consensus 314 lgl~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~-~~~p~~~~rpfd~~~~G 392 (576)
||++||+++|+++|+|++.||++|+++|++|+||++||||+|.++++..+..|...+.++.. ..+|+..|+|||.+++|
T Consensus 165 lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G 244 (428)
T 3kzu_A 165 HKLRGPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVSRISLAGFAACKALSTERNDDPTAASRPYDEDRDG 244 (428)
T ss_dssp HTCCSCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGTCCTTBTTCCS
T ss_pred cCCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCCHHHHHHHHHccccccCccCCcccccCCcccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999865 45577899999999999
Q ss_pred ceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCc
Q 008146 393 FVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTP 472 (576)
Q Consensus 393 ~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~ 472 (576)
+++|||++++||+++++|+++|++||++|+|++.++|+++.+.|.+++.++.++++++|+++|++++||||||+|||||
T Consensus 245 ~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~HgtgT- 323 (428)
T 3kzu_A 245 FVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCMVAALKRAGIVPDEIDYINAHGTST- 323 (428)
T ss_dssp BCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSS-
T ss_pred eeecCceEEEEEccHHHHHhCCCceEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHeeEEEecCCcc-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHHHcCC-CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccc
Q 008146 473 AGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERL 551 (576)
Q Consensus 473 ~gD~~E~~Al~~~f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~ 551 (576)
.+|+.|.+++.++|+.. .++++++.|+++||++||+|++++++++++|++++|||++|+++|++.+++++.. ...+.+
T Consensus 324 ~~d~~e~~al~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~-~~~~~~ 402 (428)
T 3kzu_A 324 MADTIELGAVERVVGEAAAKISMSSTKSSIGHLLGAAGAAEAVFSTLAIRDNIAPATLNLDNPAAQTRIDLVP-HKPRER 402 (428)
T ss_dssp TTHHHHHHHHHHHHGGGGGGCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBSSCCSSBCCB-SSCEEC
T ss_pred hhhHHHHHHHHHHhccCCCceeeCCchhhhCCCchhhHHHHHHHHHHHhccCccCCCCCCCCCCCCCCcccCC-CCCcCC
Confidence 99999999999999864 3689999999999999999999999999999999999999999999999887644 334556
Q ss_pred CccEEEEeccCCCcceeEEEEeeCC
Q 008146 552 EVKAALSNSFGFGGHNSSIIFSPYK 576 (576)
Q Consensus 552 ~~~~alv~sfG~gG~na~vil~~~~ 576 (576)
+++++++|||||||+|+|+||++|+
T Consensus 403 ~~~~a~~~sfGfgG~na~~vl~~~~ 427 (428)
T 3kzu_A 403 KIDVALSNSFGFGGTNASLVLRRYT 427 (428)
T ss_dssp CCSEEEEEEEETTTEEEEEEEECCC
T ss_pred CCCEEEEeCcccChhhEEEEEeecC
Confidence 7899999999999999999999985
|
| >2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-77 Score=642.83 Aligned_cols=407 Identities=40% Similarity=0.642 Sum_probs=375.2
Q ss_pred CCcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccC------CCCCCCCChhhhhcCCHHHH
Q 008146 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKS------FSTDGWVAPKLSKRMDKFML 237 (576)
Q Consensus 164 ~~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~------fd~~~~i~~~~a~~mdp~~r 237 (576)
.++|+|||||+++|+|.++++||++|.+|+++|+++++|+...++.++++++++ ||+.+|+++++++.|||+++
T Consensus 20 ~~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~d~~~~ 99 (438)
T 2iwz_A 20 HRRVVITGIGLVTPLGVGTHLVWDRLIGGESGIVSLVGEEYKSIPCSVAAYVPRGSDEGQFNEQNFVSKSDIKSMSSPTI 99 (438)
T ss_dssp ECCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCSGGGTTSSCCEEECCCBSSSTTSBCGGGTSCHHHHTTSCHHHH
T ss_pred CCCEEEEeeeEECCCCCCHHHHHHHHHcCCCccccCCchhcccCccceeeeeccccccccCChhhcCCHHHHHhcCHHHH
Confidence 357999999999999999999999999999999999999888888888888877 99998999999999999999
Q ss_pred HHHHHHHHHHHhCCCCh-hhhhcccCCeeEEEEcccCCchhHHHHHHHHH-HhhhccCCCccccccccchhHHHHHHHhC
Q 008146 238 YLLTAGKKALADGGITE-DVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 238 l~l~aa~eAL~dAGi~~-~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
|+++++++||+|||+++ + +++..++|||+|++.+++..+.+++..+ ..+...++|+.++....++.+.++++.||
T Consensus 100 l~l~aa~~AL~dAGl~~~~---~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 176 (438)
T 2iwz_A 100 MAIGAAELAMKDSGWHPQS---EADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYK 176 (438)
T ss_dssp HHHHHHHHHHHHHTCCCCS---HHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCCcc---cccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHHHHHHhC
Confidence 99999999999999987 5 4556789999999999887777766655 34556788888888888999999999999
Q ss_pred CCCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCccee
Q 008146 316 WMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVM 395 (576)
Q Consensus 316 l~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~ 395 (576)
++||+++|+++|+|++.||++|+++|++|+||+|||||+|.+++|..+..|..+++++.. .+|++.|+|||.+++|+++
T Consensus 177 l~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~-~~p~~~~~pfd~~~~G~~~ 255 (438)
T 2iwz_A 177 LKGPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALSTN-SDPKLACRPFHPKRDGFVM 255 (438)
T ss_dssp CCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC-SCTTTSCCTTCTTCCSBCB
T ss_pred CCCceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcCHHHHHHHHhcCCcCCC-CCCCcccccCCCCCCCEEe
Confidence 999999999999999999999999999999999999999998899988999999998854 3478899999999999999
Q ss_pred cCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCc
Q 008146 396 GEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGD 475 (576)
Q Consensus 396 gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD 475 (576)
|||++++||+++++|+++|++||++|+|++.++|+++++.|.+++.++.++|+++|+++|++|+||||||+|+|||+++|
T Consensus 256 geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~t~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve~HgtgT~~gD 335 (438)
T 2iwz_A 256 GEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPEEISYINAHATSTPLGD 335 (438)
T ss_dssp BCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHH
T ss_pred eceEEEEEeccHHHHHhCCCceEEEEecceecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEecCCCCcccC
Confidence 99999999999999999999999999999999999998888889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCC-CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccC--
Q 008146 476 IKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLE-- 552 (576)
Q Consensus 476 ~~E~~Al~~~f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~-- 552 (576)
++|.++|.++|+.. .+++|+++|+++||+++|+|++++++++++|+++.|||++|+++|+|.++++++. .+.++|+
T Consensus 336 ~~E~~al~~~fg~~~~~~~v~s~K~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~-~~~~~~~~~ 414 (438)
T 2iwz_A 336 AAENKAIKHLFKDHAYALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPEFDLNYVP-LKAQEWKTE 414 (438)
T ss_dssp HHHHHHHHHHHGGGGGTSEEECCHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSCCCTTCCSBCCB-SSCEECCCS
T ss_pred HHHHHHHHHHHhccCCCcceecchhhhcCCHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccccC-CCcccCCCC
Confidence 99999999999864 4689999999999999999999999999999999999999999999999887643 3345555
Q ss_pred -ccEEEEeccCCCcceeEEEEeeC
Q 008146 553 -VKAALSNSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 553 -~~~alv~sfG~gG~na~vil~~~ 575 (576)
++++++|||||||+|+|+||++|
T Consensus 415 ~~~~a~~~sfGfGG~na~~vl~~~ 438 (438)
T 2iwz_A 415 KRFIGLTNSFGFGGTNATLCIAGL 438 (438)
T ss_dssp SSCEEEEEEEETTTEEEEEEEECC
T ss_pred CccEEEEecCcCCCeeEEEEEeeC
Confidence 89999999999999999999986
|
| >2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-77 Score=638.18 Aligned_cols=399 Identities=37% Similarity=0.620 Sum_probs=363.9
Q ss_pred CcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 008146 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 244 (576)
Q Consensus 165 ~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa~ 244 (576)
++|+|||||+++|+|.++++||++|.+|+++|+++++|+...++.++.++++ ||+.+||++++.++|||+++|++++++
T Consensus 2 ~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~-fd~~~~~~~~~~~~~d~~~~l~l~aa~ 80 (406)
T 2vba_A 2 KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLIDRKVVRFMSDASIYAFLSME 80 (406)
T ss_dssp CCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECHHHHHTTCSCCEEECCC-CCCTTSSCHHHHTTCCHHHHHHHHHHH
T ss_pred CCEEEEeeEEECCCCCCHHHHHHHHHcCCCeEEeCCcccccCCccceEEEec-CChhhcCCHHHHHhcCHHHHHHHHHHH
Confidence 5799999999999999999999999999999999998887778888888998 999999999999999999999999999
Q ss_pred HHHHhCCCChhhhhcccC-CeeEEEEcccCCchhHHHHHHHHHH--hhhccCCCccccccccchhHHHHHHHhCCCCccc
Q 008146 245 KALADGGITEDVMNELDK-SKCGVLIGSGLGGMKVFYDAIEALR--ISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNY 321 (576)
Q Consensus 245 eAL~dAGi~~~~i~~~~~-~r~gV~vG~~~g~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~ 321 (576)
+||+|||++++ +++. .|+|||+|++.+++....+++..+. .+...++|+.++....++.+.++++.||++||++
T Consensus 81 ~Al~dAg~~~~---~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~Gp~~ 157 (406)
T 2vba_A 81 QAIADAGLSPE---AYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNY 157 (406)
T ss_dssp HHHHHHTCCHH---HHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTTTCCSCEE
T ss_pred HHHHHCCCChh---HcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHHHhccCCCcee
Confidence 99999999986 5666 8999999999998887777666553 3445567888888888999999999999999999
Q ss_pred cccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhc-cCCCCCCCCCCCccCCCcceecCceE
Q 008146 322 SISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQ-RNNDPTKASRPWDINRDGFVMGEGAG 400 (576)
Q Consensus 322 tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~-~~~~p~~~~rpfd~~~~G~v~gEGAa 400 (576)
+|+++|+||+.||++|+++|++|+||++||||+|.++.+..+. |..+++++. ++.+|++.|||||.+++|+++|||++
T Consensus 158 ~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~-~~~~~~ls~~~~~~p~~~~~pfd~~~~G~v~gEGaa 236 (406)
T 2vba_A 158 SISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACE-FDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGG 236 (406)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHH-HHHTTCBCCSCTTSGGGSCCTTBTTCCSBCBBCEEE
T ss_pred eeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccChHHHH-HhhccccccccCCCCccccCcCcCCCCceEeeceEE
Confidence 9999999999999999999999999999999999988887777 999998885 34457889999999999999999999
Q ss_pred EEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHH
Q 008146 401 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQ 480 (576)
Q Consensus 401 alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~ 480 (576)
++|||++++|+++|++||++|+|+++++|+++++. |++.++.++|+++|+++| +||||||+|||||+.+|++|.+
T Consensus 237 avvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~t~--p~~~~~~~ai~~al~~ag---~dId~ve~HgtgT~~gD~~E~~ 311 (406)
T 2vba_A 237 MVVVEELEHALARGAHIYAEIVGYGATSDGADMVA--PSGEGAVRCMKMAMHGVD---TPIDYLNSHGTSTPVGDVKELA 311 (406)
T ss_dssp EEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCTTS--CCSHHHHHHHHHHHTTCC---SCCCEEECCCCSCHHHHHHHHH
T ss_pred EEEeCcHHHHHHCCCeEEEEEEEEEEcCCCCCCCC--CCHHHHHHHHHHHHhhCC---CCccEEEeeCccCcccCHHHHH
Confidence 99999999999999999999999999999987654 558899999999999999 8999999999999999999999
Q ss_pred HHHHHHcCCCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCC-cccccCCcccccCccEEEEe
Q 008146 481 ALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD-TNVLVGPKKERLEVKAALSN 559 (576)
Q Consensus 481 Al~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~-~~~~~~~~~~~~~~~~alv~ 559 (576)
+|.++|+... ++|+++|+++||+++|+|++++++++++|+++.+||++|+++|++.++ ++++.. ..+. .+|++++|
T Consensus 312 al~~~fg~~~-~~v~s~K~~~GH~~gAaG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~~v~~-~~~~-~~~~a~~~ 388 (406)
T 2vba_A 312 AIREVFGDKS-PAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTE-TTDR-ELTTVMSN 388 (406)
T ss_dssp HHHHHHTTCC-CEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTCTTSEECCS-CEEC-CCCEEEEE
T ss_pred HHHHHhCcCC-CceeCchhhhcccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCccccccCCc-ccCC-CCCEEEEc
Confidence 9999998653 789999999999999999999999999999999999999999999988 665432 2223 68999999
Q ss_pred ccCCCcceeEEEEeeCC
Q 008146 560 SFGFGGHNSSIIFSPYK 576 (576)
Q Consensus 560 sfG~gG~na~vil~~~~ 576 (576)
||||||+|+|+||++|+
T Consensus 389 sfGfgG~na~~vl~~~~ 405 (406)
T 2vba_A 389 SFGFGGTNATLVMRKLK 405 (406)
T ss_dssp EEETTTEEEEEEEECC-
T ss_pred CCCCCCeEEEEEEEeCC
Confidence 99999999999999984
|
| >3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-77 Score=640.87 Aligned_cols=406 Identities=38% Similarity=0.585 Sum_probs=365.6
Q ss_pred CCCCCCcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHH
Q 008146 160 PHMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYL 239 (576)
Q Consensus 160 ~~~~~~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~ 239 (576)
..+.+++|+|||||+++|+|.++++||++|.+|+++++++++|+...++.++.++ .+||+.+||++++.+.|||+++|+
T Consensus 18 ~~~~m~~V~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~-~~fd~~~~i~~~~~~~~d~~~~l~ 96 (428)
T 3mqd_A 18 GPGSMRRVVVTGMGIVSSIGSNTEEVTASLREAKSGISRAEEYAELGFRCQVHGA-PDIDIESLVDRRAMRFHGRGTAWN 96 (428)
T ss_dssp ----CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECHHHHHTTCSCCEEEC-CCCCHHHHSCTGGGTTCCHHHHHH
T ss_pred CCCCCCCEEEEeeEEECCCcCCHHHHHHHHHcCCCcceeCCcccccCCCcccccc-cCCChhhcCCHHHHhhCCHHHHHH
Confidence 4456789999999999999999999999999999999999988877888887777 589998889999999999999999
Q ss_pred HHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHH-hhhccCCCccccccccchhHHHHHHHhCCCC
Q 008146 240 LTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALR-ISYKKMNPFCVPFATTNMGSAMLAMDLGWMG 318 (576)
Q Consensus 240 l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G 318 (576)
++++++||+|||++++ +++..++|||+|++.+++....++...+. .+....+|+.++....++.+.++++.||++|
T Consensus 97 ~~aa~~Al~dAGl~~~---~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~g 173 (428)
T 3mqd_A 97 HIAMDQAIADAGLTEE---EVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKIKG 173 (428)
T ss_dssp HHHHHHHHHHHTCCHH---HHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHHcCCChh---HccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHcCCCC
Confidence 9999999999999987 66789999999999888876666666553 5567789999999999999999999999999
Q ss_pred ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhcc-CCCCCCCCCCCccCCCcceecC
Q 008146 319 PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR-NNDPTKASRPWDINRDGFVMGE 397 (576)
Q Consensus 319 p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~-~~~p~~~~rpfd~~~~G~v~gE 397 (576)
|+++|+++|+||++||++|+++|++|+||++||||+|.+ ++.....|..++.++.. ..+|++.|||||.+++|+++||
T Consensus 174 p~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~~-s~~~~~~~~~~~~ls~~~~~~p~~~~rpfd~~~~G~v~gE 252 (428)
T 3mqd_A 174 INYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDL-DWTLSVLFDAMGAMSSKYNDTPSTASRAYDKNRDGFVIAG 252 (428)
T ss_dssp CEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECC-CHHHHHHHHHTTCBCCTTTTSGGGSCCTTBTTCCSBCBBC
T ss_pred ceeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeeccc-chHHHHHHHHhhhhcccccCCcccccCcccCCCCCccccc
Confidence 999999999999999999999999999999999999995 45555668888888865 4568899999999999999999
Q ss_pred ceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHH
Q 008146 398 GAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIK 477 (576)
Q Consensus 398 GAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~ 477 (576)
|+++|||+++++|+++|++||++|+|+++++|+++++. |++.++.++|+++|+ |++ +||||||+|||||++||++
T Consensus 253 GAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~--P~~~~~~~ai~~Al~--gl~-~dId~ve~HgtgT~~~D~~ 327 (428)
T 3mqd_A 253 GAGVLVLEDLETALARGAKIYGEIVGYGATSDGYDMVA--PSGEGAIRCMKMALS--TVT-SKIDYINPHATSTPAGDAP 327 (428)
T ss_dssp EEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSS--CCSHHHHHHHHHHHT--TCC-SCCCEEECCCCSCHHHHHH
T ss_pred ceEEEEEccHHHHHhCCCcEEEEEEEEEEcCCCCCCCC--CCHHHHHHHHHHHHh--CCc-cccCEEEEeCCCCCCcCHH
Confidence 99999999999999999999999999999999998665 478899999999999 999 9999999999999999999
Q ss_pred HHHHHHHHHcCC-CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCC-cccccCCcccccCccE
Q 008146 478 EYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD-TNVLVGPKKERLEVKA 555 (576)
Q Consensus 478 E~~Al~~~f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~-~~~~~~~~~~~~~~~~ 555 (576)
|..+|.++|+.. ..++|+++|+++||++||||++++++++++|++++|||++|+++|+|.++ +++.. ...+..++++
T Consensus 328 E~~al~~~~~~~~~~~~v~s~K~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~~~~-~~~~~~~~~~ 406 (428)
T 3mqd_A 328 EIEAIRQIFGAGDVCPPIAATKSLTGHSLGATGVQEAIYSLLMMQNNFICESAHIEELDPAFADMPIVR-KRIDNVQLNT 406 (428)
T ss_dssp HHHHHHHHHCSGGGSCCBCCTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGTTSCBCS-SCEESCCCCE
T ss_pred HHHHHHHHhcccCCCceeecchhhhcccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCcccccCCccC-CccccCCCCE
Confidence 999999999842 24799999999999999999999999999999999999999999999886 55433 2233356899
Q ss_pred EEEeccCCCcceeEEEEeeCC
Q 008146 556 ALSNSFGFGGHNSSIIFSPYK 576 (576)
Q Consensus 556 alv~sfG~gG~na~vil~~~~ 576 (576)
+++|||||||+|+|+||++|+
T Consensus 407 ~~~~sfGfGG~Na~~vl~~~~ 427 (428)
T 3mqd_A 407 VLSNSFGFGGTNATLVFQRYQ 427 (428)
T ss_dssp EEEEEEETTTEEEEEEEECCC
T ss_pred EEEecCcCCcceEEEEEeecC
Confidence 999999999999999999985
|
| >1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-76 Score=636.20 Aligned_cols=409 Identities=44% Similarity=0.707 Sum_probs=378.8
Q ss_pred CCCCCcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHH
Q 008146 161 HMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLL 240 (576)
Q Consensus 161 ~~~~~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l 240 (576)
-|++++|+|||||+++|.+.++++||++|.+|+++++++++|+...++.++.+++++||+.+|+++++++.|||+++|++
T Consensus 19 ~m~m~~v~ItG~g~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~d~~~~l~l 98 (430)
T 1ox0_A 19 HMKLNRVVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGITKFDHSDFDVHNAAEIQDFPFDKYFVKKDTNRFDNYSLYAL 98 (430)
T ss_dssp SCCCCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECCSSCCHHHHCCGGGGGTCCHHHHHHH
T ss_pred cccCCCEEEEEEEEECCCcCCHHHHHHHHHcCCCeeeeCCcccccCCccceeeeccCCChhhcCCHHHHHhcCHHHHHHH
Confidence 35678999999999999999999999999999999999999998888888899999999888899999999999999999
Q ss_pred HHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHH-HhhhccCCCccccccccchhHHHHHHHhCCCCc
Q 008146 241 TAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGP 319 (576)
Q Consensus 241 ~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp 319 (576)
+++++||+|||++++ +++..++|||+|++.+++....+++..+ ..+...++|+.++....++.+.+|++.||++||
T Consensus 99 ~aa~~AL~dAG~~~~---~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~Gp 175 (430)
T 1ox0_A 99 YAAQEAVNHANLDVE---ALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGV 175 (430)
T ss_dssp HHHHHHHHHTTCCTT---TSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSC
T ss_pred HHHHHHHHHcCCChh---hcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhcCCCc
Confidence 999999999999986 6678899999999988877666665554 345667888888988999999999999999999
Q ss_pred cccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCce
Q 008146 320 NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGA 399 (576)
Q Consensus 320 ~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGA 399 (576)
+++|+++|+|++.||++|+++|++|+||+|||||+|.+++|..+..|..++.++. .++|++.|+|||.+++|+++|||+
T Consensus 176 ~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~-~~~p~~~~~pFd~~~~g~~~geGA 254 (430)
T 1ox0_A 176 CKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALST-TEDPTRASIPFDKDRNGFVMGEGS 254 (430)
T ss_dssp EECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCC-CSSTTSSSCTTBTTCCSBCBCCEE
T ss_pred eEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhCCCccC-CCCCCCCCCCCCCCCCCccccceE
Confidence 9999999999999999999999999999999999999999988889999988874 345888999999999999999999
Q ss_pred EEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHH
Q 008146 400 GVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEY 479 (576)
Q Consensus 400 aalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~ 479 (576)
+++||+++++|+++|++||++|+|++.++|+++.+.|.+++.++.++|+++|+++|++++||||||+|+|||+.+|+.|.
T Consensus 255 aavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~ 334 (430)
T 1ox0_A 255 GMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGES 334 (430)
T ss_dssp EEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHH
T ss_pred EEEEECcHHHHHhCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhCcCHHHcCEEEEeCCcCcccCHHHH
Confidence 99999999999999999999999999999999988888889999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEe
Q 008146 480 QALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSN 559 (576)
Q Consensus 480 ~Al~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~ 559 (576)
.++.++|+. +++|+++|+++||+++|+|++++++++++|+++.|||++|+++|+|.++++++. .+.+++.++++++|
T Consensus 335 ~al~~~~g~--~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~-~~~~~~~~~~a~~~ 411 (430)
T 1ox0_A 335 GAIVAVLGK--EVPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANVVY-GQGLEKEIPYAISN 411 (430)
T ss_dssp HHHHHHHCS--SSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCCSEECB-SSCEECCCSEEEEE
T ss_pred HHHHHHhCC--CceecccccccccchhhHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCC-CCCcCCCCCEEEEe
Confidence 999999987 489999999999999999999999999999999999999999999999887643 33445678999999
Q ss_pred ccCCCcceeEEEEeeCC
Q 008146 560 SFGFGGHNSSIIFSPYK 576 (576)
Q Consensus 560 sfG~gG~na~vil~~~~ 576 (576)
||||||+|+|+||++|+
T Consensus 412 sfGfGG~na~~vl~~~~ 428 (430)
T 1ox0_A 412 TFGFGGHNAVLAFKRWE 428 (430)
T ss_dssp EEETTTEEEEEEEECCC
T ss_pred CccCCCceEEEEEeecC
Confidence 99999999999999984
|
| >1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-77 Score=641.14 Aligned_cols=406 Identities=33% Similarity=0.512 Sum_probs=371.6
Q ss_pred CcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCC-CChhhhhcCCHHHHHHHHHH
Q 008146 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGW-VAPKLSKRMDKFMLYLLTAG 243 (576)
Q Consensus 165 ~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~-i~~~~a~~mdp~~rl~l~aa 243 (576)
++|+|||||+++|+|.++++||++|.+|+++++++++|+...++..+.+++ +||+.+| |++++++.|||+++|+++++
T Consensus 3 ~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~-~fd~~~~~i~~~~~~~~d~~~~l~l~aa 81 (424)
T 1tqy_A 3 RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEA-DFDPVAEGFGPRELDRMDRASQFAVACA 81 (424)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECC-CCCHHHHTCCHHHHHHSCHHHHHHHHHH
T ss_pred CCEEEEeeEEECCCCCCHHHHHHHHHcCCCceeeCCCcccccCCcceeEEe-ccCHhhcCCCHHHHHhcCHHHHHHHHHH
Confidence 479999999999999999999999999999999999999888888888888 8999888 99999999999999999999
Q ss_pred HHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHH---hhhccCCCccccccccchhHH----HHHHHhCC
Q 008146 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALR---ISYKKMNPFCVPFATTNMGSA----MLAMDLGW 316 (576)
Q Consensus 244 ~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~a~----~ia~~lgl 316 (576)
++||+|||++++ +++..|+|||+|++.+++....+.+..+. ......+++.++....+..++ ++++.||+
T Consensus 82 ~~AL~dAG~~~~---~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ia~~lgl 158 (424)
T 1tqy_A 82 REAFAASGLDPD---TLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGA 158 (424)
T ss_dssp HHHHHHHTCCTT---TCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHCCCCch---hcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhHhHHHHhcCC
Confidence 999999999986 66788999999999988877776666553 333455666655555554455 99999999
Q ss_pred CCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceec
Q 008146 317 MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMG 396 (576)
Q Consensus 317 ~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~g 396 (576)
+||+++|+++|+|++.||++|+++|++|+||++||||+|.+++|..+..|..+++++..+.+|++.|||||.+++|+++|
T Consensus 159 ~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~g 238 (424)
T 1tqy_A 159 EGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARNDDPEHASRPFDGTRDGFVLA 238 (424)
T ss_dssp CSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCSCGGGCCCTTBTTCCCBCEE
T ss_pred CCceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCCHHHHHHHHhhccccCCCCCCCCCccCCCCCCCceeee
Confidence 99999999999999999999999999999999999999998899999999999999876777889999999999999999
Q ss_pred CceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcH
Q 008146 397 EGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDI 476 (576)
Q Consensus 397 EGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~ 476 (576)
||++++|||++++|+++|++||++|+|++.++|+++.+.|.|++.++.++|+++|+++|++++||||||+|+|||+++|+
T Consensus 239 eGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~g~~~~~ai~~al~~agl~~~dId~ve~Hgtgt~~gD~ 318 (424)
T 1tqy_A 239 EGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTDATDIDYINAHGSGTRQNDR 318 (424)
T ss_dssp CEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHH
T ss_pred cceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCccCcCcCH
Confidence 99999999999999999999999999999999999998899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCC-CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccE
Q 008146 477 KEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKA 555 (576)
Q Consensus 477 ~E~~Al~~~f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 555 (576)
+|.++|.++|+.. .+++|+++|+++||+++|+|++++++++++|+++.+||++|+++|++.++++++. .+.+++++++
T Consensus 319 ~E~~al~~~f~~~~~~~~v~s~k~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~-~~~~~~~~~~ 397 (424)
T 1tqy_A 319 HETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECDLDYVP-LEARERKLRS 397 (424)
T ss_dssp HHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCSBBTTBCSCCCB-SSCEECCCSE
T ss_pred HHHHHHHHHhcccCCCCeeeccccccccChhhhHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCcccCC-CcccCCCCCE
Confidence 9999999999864 3588999999999999999999999999999999999999999999999887643 3455667899
Q ss_pred EEEeccCCCcceeEEEEeeC
Q 008146 556 ALSNSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 556 alv~sfG~gG~na~vil~~~ 575 (576)
+++|||||||+|+|+||++|
T Consensus 398 a~~~sfG~GG~n~~~vl~~~ 417 (424)
T 1tqy_A 398 VLTVGSGFGGFQSAMVLRDA 417 (424)
T ss_dssp EEEEEEETTTEEEEEEEECH
T ss_pred EEEccccCCceEEEEEEccC
Confidence 99999999999999999986
|
| >1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-76 Score=635.17 Aligned_cols=403 Identities=25% Similarity=0.396 Sum_probs=372.9
Q ss_pred CCcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 008146 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 243 (576)
Q Consensus 164 ~~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa 243 (576)
.++|+|||||+++|+|.+.++||++|.+|+++|+++++|+...++.++++++++||+.+||++++.+.|||+++|+++++
T Consensus 8 ~~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~d~~~~l~l~aa 87 (415)
T 1tqy_B 8 DKSVLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDDFHAPDHIPGRLLPQTDPSTRLALTAA 87 (415)
T ss_dssp --CEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECTTTTGGGSSCCEEECCCSCCHHHHSCTTTGGGCCHHHHHHHHHH
T ss_pred CCCEEEEeeEEECCCCCCHHHHHHHHHcCCCcEEECCcccccCCCcceEEEeCCCCchhcCCHHHHHhcCHHHHHHHHHH
Confidence 46799999999999999999999999999999999999988888888899999999988899999999999999999999
Q ss_pred HHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHH-HhhhccCCCccccccccchhHHHHHHHhCCCCcccc
Q 008146 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYS 322 (576)
Q Consensus 244 ~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~t 322 (576)
++||+|||++++ +++..++|||+|++.+++....+++..+ ..+....+|+.++....+..+.++++.||++||+++
T Consensus 88 ~~AL~dAGl~~~---~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp~~~ 164 (415)
T 1tqy_B 88 DWALQDAKADPE---SLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSSA 164 (415)
T ss_dssp HHHHHHTTCCGG---GSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTCCSSCEE
T ss_pred HHHHHHcCCCcc---ccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHhCCCCceEe
Confidence 999999999987 6678899999999999998877777666 345567889888888999999999999999999999
Q ss_pred ccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceEEE
Q 008146 323 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 402 (576)
Q Consensus 323 v~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAaal 402 (576)
|+++|+|++.||++|+++|++| ||++||||+|.++++..+..|..+++|+. +.+|++.|+|||.+++|+++|||++++
T Consensus 165 v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~~~~~~~~~~~~~ls~-~~~~~~~~~pfd~~~~G~~~geGaaav 242 (415)
T 1tqy_B 165 LVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRIST-ATDPDRAYLPFDERAAGYVPGEGGAIL 242 (415)
T ss_dssp EECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTTSCBCC-CSCGGGSCCTTSTTCCCBCBBCEEEEE
T ss_pred ecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCCHHHHHHHHhccCccC-CCCCCCCcCCCCCCCCCcceeeeEEEE
Confidence 9999999999999999999999 99999999999999999999999999986 445778999999999999999999999
Q ss_pred EEcchHHHHhcCC-eeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHH
Q 008146 403 LLEELEHAKKRGA-KIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQA 481 (576)
Q Consensus 403 vL~~~~~A~~~g~-~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~A 481 (576)
||+++++|+++|+ +||++|+|++.++|+++++.|.+ ++.++|+++|+++|++++||||||+|||||+++|++|..+
T Consensus 243 vL~~~~~A~~~g~~~i~a~I~g~~~~~dg~~~~~p~~---~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~a 319 (415)
T 1tqy_B 243 VLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPA---GLERAIRLALNDAGTGPEDVDVVFADGAGVPELDAAEARA 319 (415)
T ss_dssp EEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCC---SHHHHHHHHHHHHTCCGGGCCEEECCCCCSHHHHHHHHHH
T ss_pred EECcHHHHHHCCCCceEEEEEEEEEccCCCCCCCCCH---HHHHHHHHHHHHcCCCHhHCCEEEEeCCCCcCcCHHHHHH
Confidence 9999999999999 99999999999999999776665 7899999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEecc
Q 008146 482 LIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSF 561 (576)
Q Consensus 482 l~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sf 561 (576)
+.++|+.. .++|++.|+++||++||+|++++++++++|+++.|||++|+++|++.++++++ ..+.+++.++++++|||
T Consensus 320 l~~~~g~~-~~~v~s~K~~~GH~~gAaG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~~~v-~~~~~~~~~~~a~~~sf 397 (415)
T 1tqy_B 320 IGRVFGRE-GVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYGIDLV-LGEPRSTAPRTALVLAR 397 (415)
T ss_dssp HHHHHCTT-CSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCCCGGGCCEEC-BSSCBCCCCSEEEEEEE
T ss_pred HHHHhCCC-CceEeccchhhccChHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcccc-CCCCccCCCCEEEEecC
Confidence 99999865 48999999999999999999999999999999999999999999999887754 33456678899999999
Q ss_pred CCCcceeEEEEeeCC
Q 008146 562 GFGGHNSSIIFSPYK 576 (576)
Q Consensus 562 G~gG~na~vil~~~~ 576 (576)
||||+|+|+||++|.
T Consensus 398 GfgG~n~~~vl~~~~ 412 (415)
T 1tqy_B 398 GRWGFNSAAVLRRFA 412 (415)
T ss_dssp ETTTEEEEEEEEEC-
T ss_pred cCCCeEEEEEEecCC
Confidence 999999999999973
|
| >2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-76 Score=631.04 Aligned_cols=405 Identities=34% Similarity=0.534 Sum_probs=373.2
Q ss_pred CCCcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCC--CCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHH
Q 008146 163 KQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFD--CTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLL 240 (576)
Q Consensus 163 ~~~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~--~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l 240 (576)
..++|+|||||+++|+|.++++||++|++|+++|+++++|+ ...++.++++++++ |+.+||++++++.|||+++|++
T Consensus 26 ~~~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~v~~-d~~~~~~~~~~~~~d~~~~l~l 104 (434)
T 2gp6_A 26 AFPYVVVTGIAMTTALATDAETTWKLLLDRQSGIRTLDDPFVEEFDLPVRIGGHLLE-EFDHQLTRIELRRMGYLQRMST 104 (434)
T ss_dssp TSCCEEEEEEEEECSSCSSHHHHHHHHHTTCCCEEECCCHHHHHHCCSCCEEECCSC-CSTTSSCHHHHHTCCHHHHHHH
T ss_pred CCCCEEEEeeEEeCCCCCCHHHHHHHHHcCCCeeeeCCccccccccCccceeEEcCC-chhhhCCHHHHHhCCHHHHHHH
Confidence 35679999999999999999999999999999999999887 55677788888887 7778899999999999999999
Q ss_pred HHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHH-hhhccCCCccccccccchhHHHHHHHhCCCCc
Q 008146 241 TAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALR-ISYKKMNPFCVPFATTNMGSAMLAMDLGWMGP 319 (576)
Q Consensus 241 ~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp 319 (576)
+++++||+|||++ ++++.++|||+|++.+++....+++..+. .+....+|+.++....++.+.+|++.||++||
T Consensus 105 ~aa~~ALedAG~~-----~~~~~~igv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~lgl~Gp 179 (434)
T 2gp6_A 105 VLSRRLWENAGSP-----EVDTNRLMVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHAKAG 179 (434)
T ss_dssp HHHHHHHHHTTCC-----CCCTTSEEEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHHHSCCCSC
T ss_pred HHHHHHHHhcCCC-----ccCCCceEEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhhhhcCCCC
Confidence 9999999999993 56788999999999998887776666553 34456788888888889999999999999999
Q ss_pred cccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhh-hhhccCCCCCCCCCCCccCCCcceecCc
Q 008146 320 NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACR-ALSQRNNDPTKASRPWDINRDGFVMGEG 398 (576)
Q Consensus 320 ~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~-~ls~~~~~p~~~~rpfd~~~~G~v~gEG 398 (576)
+++|+++|+|++.||++|+++|++|+||++||||+|.+..+..+..|..++ .++..+..|++.|+|||.+++|+++|||
T Consensus 180 ~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~~g~v~gdG 259 (434)
T 2gp6_A 180 VMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDRDRDGFVFGEG 259 (434)
T ss_dssp EECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHHHHHHHHTTTSSCCCCTTCTTTSCCSSBTTCCCCCBBCC
T ss_pred eEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHHHHHhcCCCCCCCCceecccccCCCcceecc
Confidence 999999999999999999999999999999999999999998899999998 7877666788999999999999999999
Q ss_pred eEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHH
Q 008146 399 AGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKE 478 (576)
Q Consensus 399 AaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E 478 (576)
++++||+++++|+++|++||++|+|+++++|+++++.|.+++.++.++|+++|+++|++++||||||+|+|+|+.+|++|
T Consensus 260 AaavvL~~~~~A~~~g~~i~a~I~g~~~~~Dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E 339 (434)
T 2gp6_A 260 GALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQLAGLAPGDIDHVNAHATGTQVGDLAE 339 (434)
T ss_dssp EEEEEEEEHHHHHTTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHTTCCTTTEEEEECCCCSCHHHHHHH
T ss_pred eEEEEeCcHHHHHHCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCccchHHH
Confidence 99999999999999999999999999999999998888888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEE
Q 008146 479 YQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALS 558 (576)
Q Consensus 479 ~~Al~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv 558 (576)
.++|.++|+.. ++++++.|+++||++||+|++++++++++|+++.+||++|+++|+|.++++++. .+.+++.+|++++
T Consensus 340 ~~al~~~fg~~-~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~-~~~~~~~~~~a~~ 417 (434)
T 2gp6_A 340 GRAINNALGGN-RPAVYAPKSALGHSVGAVGAVESILTVLALRDQVIPPTLNLVNLDPEIDLDVVA-GEPRPGNYRYAIN 417 (434)
T ss_dssp HHHHHHHHTTC-CCEECCTHHHHCBCTTTHHHHHHHHHHHHHHHSCCCCCSSCSSBCTTCCCEECC-SSCCCSCCCEEEE
T ss_pred HHHHHHHhccC-CCCcccchhhhcCchhhhHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccccC-CCccCCCCCEEEE
Confidence 99999999865 689999999999999999999999999999999999999999999999887643 3345567899999
Q ss_pred eccCCCcceeEEEEeeC
Q 008146 559 NSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 559 ~sfG~gG~na~vil~~~ 575 (576)
|||||||+|+|+||++|
T Consensus 418 ~sfGfGG~na~~vl~~~ 434 (434)
T 2gp6_A 418 NSFGFGGHNVAIAFGRY 434 (434)
T ss_dssp EEEETTTEEEEEEEECC
T ss_pred eCCcCCCeeEEEEEEeC
Confidence 99999999999999987
|
| >2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-76 Score=631.17 Aligned_cols=404 Identities=33% Similarity=0.554 Sum_probs=372.1
Q ss_pred CCCcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCC--CCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHH
Q 008146 163 KQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFD--CTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLL 240 (576)
Q Consensus 163 ~~~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~--~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l 240 (576)
.+++|+|||||+++|+|.++++||++|.+|+++|+++++|+ ...++.++++++++ |+.+||++++++.|||+++|++
T Consensus 10 ~~~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~d~~~~l~l 88 (416)
T 2wge_A 10 GFPSVVVTAVTATTSISPDIESTWKGLLAGESGIHALEDEFVTKWDLAVKIGGHLKD-PVDSHMGRLDMRRMSYVQRMGK 88 (416)
T ss_dssp SSCCEEEEEEEEEESSCSSHHHHHHHHHTTCCCCEECCCHHHHHHTCSCCEEBCCSS-CGGGGCCHHHHHHSCHHHHHHH
T ss_pred CCCcEEEEeeEEECCCCCCHHHHHHHHHcCCCEEEeCCccccccccCCccEEEEeCC-chhhhCCHHHHHhcCHHHHHHH
Confidence 35689999999999999999999999999999999999887 45677788889987 7778899999999999999999
Q ss_pred HHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHH-HhhhccCCCccccccccchhHHHHHHHhCCCCc
Q 008146 241 TAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGP 319 (576)
Q Consensus 241 ~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp 319 (576)
+++++||+|||++ +++..++|||+|++.+++....+++..+ ..+....+|+.++....+..+.+|++.||++||
T Consensus 89 ~aa~~AL~dAG~~-----~~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp 163 (416)
T 2wge_A 89 LLGGQLWESAGSP-----EVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGARAG 163 (416)
T ss_dssp HHHHHHHHHTTCC-----CCCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSC
T ss_pred HHHHHHHHHcCCC-----ccCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHHHHHhccCCC
Confidence 9999999999992 5678899999999998887777766655 345567888888888899999999999999999
Q ss_pred cccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCce
Q 008146 320 NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGA 399 (576)
Q Consensus 320 ~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGA 399 (576)
+++|+++|+|++.||++|+++|++|+||++||||+|.++.+..+..|...+.++..+.+|+..|+|||.+++|+++|||+
T Consensus 164 ~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~pfd~~~dg~v~geGa 243 (416)
T 2wge_A 164 VMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTRNDEPERASRPFDKDRDGFVFGEAG 243 (416)
T ss_dssp EECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHHHHHHHTTTCBCCCTTSGGGSCCTTBTTCCCBCBBCEE
T ss_pred cccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHHHHHHHhcchhhccccCCcccccccccCCCCccccCce
Confidence 99999999999999999999999999999999999999999888999999999887777899999999999999999999
Q ss_pred EEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHH
Q 008146 400 GVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEY 479 (576)
Q Consensus 400 aalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~ 479 (576)
+++||+++++|+++|++||++|+|++.++|+++.+.|.+.+.++.++|+++|+++|++++||||||+|||||+.||++|.
T Consensus 244 aavvL~~~~~A~~~g~~~~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~HgtgT~~gD~~E~ 323 (416)
T 2wge_A 244 ALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPADIDHVNAHGTATPIGDAAEA 323 (416)
T ss_dssp EEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHHHHH
T ss_pred EEEEECcHHHHHHCCCceEEEEEEEEEecCCCCccCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEECCCCCcCCCHHHH
Confidence 99999999999999999999999999999999988888889999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEe
Q 008146 480 QALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSN 559 (576)
Q Consensus 480 ~Al~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~ 559 (576)
.++.++ +.. ++++++.|+++||++||+|++++++++++|+++.|||++|+++|+|.++++++. .+.++..+|++++|
T Consensus 324 ~al~~~-~~~-~~~v~s~k~~~GH~~gAsG~~~~i~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~-~~~~~~~~~~a~~~ 400 (416)
T 2wge_A 324 NAIRVA-GCD-QAAVYAPKSALGHSIGAVGALESVLTVLTLRDGVIPPTLNYETPDPEIDLDVVA-GEPRYGDYRYAVNN 400 (416)
T ss_dssp HHHHHT-TCT-TSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTTCCEECC-SSCEECCCCEEEEE
T ss_pred HHHHHh-ccC-CCCccCCcccccCcHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcccCC-CCCccCCCCEEEEe
Confidence 999988 543 589999999999999999999999999999999999999999999999887643 33444578999999
Q ss_pred ccCCCcceeEEEEeeC
Q 008146 560 SFGFGGHNSSIIFSPY 575 (576)
Q Consensus 560 sfG~gG~na~vil~~~ 575 (576)
||||||+|+|+||++|
T Consensus 401 sfGfGG~na~~vl~~~ 416 (416)
T 2wge_A 401 SFGFGGHNVALAFGRY 416 (416)
T ss_dssp EEETTTEEEEEEEECC
T ss_pred CcccCceeEEEEEEeC
Confidence 9999999999999987
|
| >4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-76 Score=634.41 Aligned_cols=409 Identities=40% Similarity=0.666 Sum_probs=379.4
Q ss_pred CCcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCCCcccccccc--------CCCCCCCCChhhhhcCCHH
Q 008146 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIK--------SFSTDGWVAPKLSKRMDKF 235 (576)
Q Consensus 164 ~~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~--------~fd~~~~i~~~~a~~mdp~ 235 (576)
+++|+|||||+++|+|.++++||++|.+|+++++++++|+...++.+++++++ +||+.+||++++++.|||+
T Consensus 23 ~~~v~ItG~g~~~P~g~~~~~~w~~l~~g~s~i~~~~~~~~~~~~~~~~g~v~~~~~~~~~~fd~~~~i~~~~~~~~d~~ 102 (451)
T 4ddo_A 23 TLRVVVTGIGIVSPLGCGKELVWQRLIGGGSGLRRLGDDIAGELSAKVGGTVQDVAEDPEGGFDPERSVPHKELRKMDRF 102 (451)
T ss_dssp -CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCHHHHTTSSCCEEECCCCTTTCTTTCCCGGGTSCHHHHTTSCHH
T ss_pred CCCEEEEEeEEECCCCCCHHHHHHHHHcCCCeeeeCCccccccccCccceEccccccccccccchhhhCCHHHHhhCCHH
Confidence 36899999999999999999999999999999999999988888888888887 7999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcc-cCCeeEEEEcccCCchhHHHHHHHHHH-hhhccCCCccccccccchhHHHHHHH
Q 008146 236 MLYLLTAGKKALADGGITEDVMNEL-DKSKCGVLIGSGLGGMKVFYDAIEALR-ISYKKMNPFCVPFATTNMGSAMLAMD 313 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~-~~~r~gV~vG~~~g~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~a~~ia~~ 313 (576)
++|+++++++||+|||++++ ++ +..++|||+|++.+++....+++..+. .+...++|+.++....++.++++++.
T Consensus 103 ~~L~l~Aa~~AL~dAGl~~~---~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 179 (451)
T 4ddo_A 103 IQMAMVAADEALAEAGWAPE---AEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIK 179 (451)
T ss_dssp HHHHHHHHHHHHHHHTCCCC---SHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCChh---hcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHHHHHHHH
Confidence 99999999999999999987 45 678999999999999888877777663 45567888888999999999999999
Q ss_pred hCCCCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhcc-CCCCCCCCCCCccCCCc
Q 008146 314 LGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR-NNDPTKASRPWDINRDG 392 (576)
Q Consensus 314 lgl~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~-~~~p~~~~rpfd~~~~G 392 (576)
||++||+++|+++|+|++.||++|+++|++|+||+|||||+|.++.+..+..|...++++.. ..+|.+.|+|||.+++|
T Consensus 180 lgl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~g 259 (451)
T 4ddo_A 180 HRFRGPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKVSLGGFAAARALSTGFSEEPVRASRPFDRDRDG 259 (451)
T ss_dssp HTCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGSCCTTBTTCCS
T ss_pred hcCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccCHHHHHHHHHHhhhccCCCcCccccccccccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999998865 45577899999999999
Q ss_pred ceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCc
Q 008146 393 FVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTP 472 (576)
Q Consensus 393 ~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~ 472 (576)
+++|||++++||+++++|+++|++||++|+|++.++|+.+++.+.+++.++.++++++|+++|++++||||||+|+|||+
T Consensus 260 ~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~ 339 (451)
T 4ddo_A 260 FVMGEGAAMVVVESLDHALARGARPIAEIIGYGTTADAYHMTAGPDDGSGAMRAMKLALRMGDVAPEQVDYVNAHATSTP 339 (451)
T ss_dssp BCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCH
T ss_pred cEEeceEEEEEEeeHHHHHhCCCceEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEecCCcCc
Confidence 99999999999999999999999999999999999999999888889999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHHHcCCCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCC-CcccccCCccccc
Q 008146 473 AGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVV-DTNVLVGPKKERL 551 (576)
Q Consensus 473 ~gD~~E~~Al~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~-~~~~~~~~~~~~~ 551 (576)
++|++|..++.++|+...+++|+++|+++||++||+|++++++++++|++++|||++|+++|++.+ +++++ ..+.+.+
T Consensus 340 ~~d~~E~~al~~~~~~~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~-~~~~~~~ 418 (451)
T 4ddo_A 340 VGDAGEIEALKTVFGVGAGPAISSTKSATGHLLGAAGAIEAAFSILALRDGVLPGTLNLEHPDPAADGLDLI-GPAARHV 418 (451)
T ss_dssp HHHHHHHHHHHHHHCSSSSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGTTSEEC-CSSCEEC
T ss_pred ccCHHHHHHHHHHhCCCCCCcccCchhhhccCHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCccccccccc-CCCCCCC
Confidence 999999999999998766789999999999999999999999999999999999999999999988 66653 3445566
Q ss_pred CccEEEEeccCCCcceeEEEEeeCC
Q 008146 552 EVKAALSNSFGFGGHNSSIIFSPYK 576 (576)
Q Consensus 552 ~~~~alv~sfG~gG~na~vil~~~~ 576 (576)
+++++++|||||||+|+|+||++|.
T Consensus 419 ~~~~a~~~sfgfgG~na~~vl~~~~ 443 (451)
T 4ddo_A 419 PVEIALSNGFGFGGVNASVLFRRYP 443 (451)
T ss_dssp CCSEEEEEEEETTTEEEEEEEEESC
T ss_pred CcCEEEEeeEcCCCceEEEEEeeCC
Confidence 7899999999999999999999984
|
| >2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-75 Score=627.74 Aligned_cols=403 Identities=41% Similarity=0.707 Sum_probs=365.3
Q ss_pred cEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCC--------------CCCCcccccccc------CCCCCCCCC
Q 008146 166 RVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDC--------------TSFPTKIAAEIK------SFSTDGWVA 225 (576)
Q Consensus 166 ~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~--------------~~~~~~~~g~v~------~fd~~~~i~ 225 (576)
+|||||||+++|+|.++++||++|++|+++|+++++|+. ..++.+++++++ +||+.+|++
T Consensus 2 ~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~fd~~~~~~ 81 (431)
T 2ix4_A 2 RVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGSNPGEFDEALWLN 81 (431)
T ss_dssp CEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCGGGGCCTTSCHHHHHHHHHTCSCCEEECCCBSSSTTSBCHHHHSC
T ss_pred cEEEEeeeEECCCCCCHHHHHHHHHcCCCeeeeCChhhhhccccccccccccccCcccceeEEeccccccccCChhhcCC
Confidence 699999999999999999999999999999999998873 245566777777 788877787
Q ss_pred hhhhhcCCHHHHHHHHHHHHHHHhCCC-ChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHH-hhhccCCCcccccccc
Q 008146 226 PKLSKRMDKFMLYLLTAGKKALADGGI-TEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALR-ISYKKMNPFCVPFATT 303 (576)
Q Consensus 226 ~~~a~~mdp~~rl~l~aa~eAL~dAGi-~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~ 303 (576)
++ .|||+++|+++++++||+|||+ +++ +++..++|||+|++.+++....+++..+. .+....+|+.++....
T Consensus 82 ~~---~~d~~~~l~l~aa~~AL~dAG~~~~~---~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 155 (431)
T 2ix4_A 82 SK---AVANFIGYAVCAADEALRDAEWLPTE---EEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILV 155 (431)
T ss_dssp ST---TCCHHHHHHHHHHHHHHHHTTCCCCS---HHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCT
T ss_pred hh---hCCHHHHHHHHHHHHHHHHcCCCCcc---ccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchh
Confidence 76 8999999999999999999999 876 45567999999999988877766666553 3445678888888888
Q ss_pred chhHHHHHHHhCCCCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhcc-CCCCCCC
Q 008146 304 NMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR-NNDPTKA 382 (576)
Q Consensus 304 ~~~a~~ia~~lgl~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~-~~~p~~~ 382 (576)
++.+.++++.||++||+++|+++|+|++.||++|+++|++|+||++||||+|.++++..+..|..+++++.. +.+|++.
T Consensus 156 ~~~a~~ia~~lgl~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~ 235 (431)
T 2ix4_A 156 NMASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEA 235 (431)
T ss_dssp THHHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGGS
T ss_pred HHHHHHHHHHHCCCCceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccccCccccCCcccc
Confidence 999999999999999999999999999999999999999999999999999999999888899999988853 4567889
Q ss_pred CCCCccCCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcc
Q 008146 383 SRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVN 462 (576)
Q Consensus 383 ~rpfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId 462 (576)
|+|||.+++|+++|||++++||+++++|+++|++||++|+|++.++|+++++.|.+++.++.++++++|+++|++++|||
T Consensus 236 ~~pfd~~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId 315 (431)
T 2ix4_A 236 SRPFDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQID 315 (431)
T ss_dssp CCTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCC
T ss_pred cccCCCCCCCceeecceEEEEEccHHHHHhCCCceEEEEeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcC
Confidence 99999999999999999999999999999999999999999999999999888888899999999999999999999999
Q ss_pred EEEecCCCCccCcHHHHHHHHHHHcCC---CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCC
Q 008146 463 YINAHATSTPAGDIKEYQALIHCFGQN---RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD 539 (576)
Q Consensus 463 ~ve~Hgtgt~~gD~~E~~Al~~~f~~~---~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~ 539 (576)
|||+|||||+++|++|..++.++|+.. .+++++++|+++||+++|+|++++++++++|+++.|||++|+++|++.++
T Consensus 316 ~ve~HgtgT~~~D~~E~~al~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~ 395 (431)
T 2ix4_A 316 YVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFD 395 (431)
T ss_dssp EEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTTCC
T ss_pred EEEEeCCcCcccCHHHHHHHHHHHcccccCCCceeecchhhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCC
Confidence 999999999999999999999999743 46899999999999999999999999999999999999999999999998
Q ss_pred cccccCCccccc-CccEEEEeccCCCcceeEEEEeeC
Q 008146 540 TNVLVGPKKERL-EVKAALSNSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 540 ~~~~~~~~~~~~-~~~~alv~sfG~gG~na~vil~~~ 575 (576)
++++. .+.+++ .+|++++|||||||+|+|+||++|
T Consensus 396 ~~~v~-~~~~~~~~~~~a~~~sfGfGG~na~~il~~~ 431 (431)
T 2ix4_A 396 KRFMP-LTTSKKMLVRTAMSNSFGFGGTNASLLFASI 431 (431)
T ss_dssp SSSCC-CSSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred cccCC-ccccccCCCCEEEEecccCCCeeEEEEEeeC
Confidence 87643 334455 789999999999999999999987
|
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-74 Score=673.24 Aligned_cols=394 Identities=26% Similarity=0.410 Sum_probs=353.8
Q ss_pred CCcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccC-CCCCCC-Ccccccc---ccCCCCCCC-CChhhhhcCCHHHH
Q 008146 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIET-FDCTSF-PTKIAAE---IKSFSTDGW-VAPKLSKRMDKFML 237 (576)
Q Consensus 164 ~~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~-~~~~~~-~~~~~g~---v~~fd~~~~-i~~~~a~~mdp~~r 237 (576)
+++||||||||++|+|.++++||++|.+|+++++++++ |+...+ .....+. ++.||+.+| |+|+|++.||||||
T Consensus 3 ~~~IaIvGmg~r~P~~~~~~~~W~~l~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~i~~~ea~~mDp~~r 82 (965)
T 3hhd_A 3 GEEVVIAGMSGKLPESENLQEFWDNLIGGVDMVTDDDRRWKAGLYGLPRRSGKLKDLSRFDASFFGVHPKQAHTMDPQLR 82 (965)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEECSSSSSCTTGGGCCSCEECCSCSSCCCTTTTTCCHHHHHTSCHHHH
T ss_pred CCCEEEEeeeEECCCCCCHHHHHHHHHcCCCcccCCCcccccccccCcccccccCChhhcChhhcCCCHHHHhhcCHHHH
Confidence 57899999999999999999999999999999998854 443221 1122333 445999999 99999999999999
Q ss_pred HHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCCC
Q 008146 238 YLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM 317 (576)
Q Consensus 238 l~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~ 317 (576)
|+++++++||+|||++++ ++++.++|||+|++.+++. ..+......+.++..++...++.+++|++.|||+
T Consensus 83 L~leaa~eALedAGi~~~---~i~~~~~Gv~vG~~~~d~~------~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~ 153 (965)
T 3hhd_A 83 LLLEVTYEAIVDGGINPD---SLRGTHTGVWVGVSGSETS------EALSRDPETLVGYSMVGCQRAMMANRLSFFFDFR 153 (965)
T ss_dssp HHHHHHHHHHHHTTCCGG---GGTTSCCEEEEEECCCHHH------HHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHcCCChH---HcCCceeEEEEeccchhHH------HHHhcCccccCcccccccccchHHHHHHHHhCCC
Confidence 999999999999999987 6788999999998876543 2222344556777778888999999999999999
Q ss_pred CccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecC
Q 008146 318 GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGE 397 (576)
Q Consensus 318 Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gE 397 (576)
||+++|+++|+||++||++|+++|++|+||++||||+|.+++|..+..|.++++|+ |++.|+|||.+++||++||
T Consensus 154 GPs~tvdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~~~~~~~~~~ls-----~~g~~~~Fd~~adG~~~gE 228 (965)
T 3hhd_A 154 GPSIALDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRLGMLS-----PEGTCKAFDTAGNGYCRSE 228 (965)
T ss_dssp SCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHHHHHHHHHTCBC-----TTCCCCTTBTTCCSBCBBC
T ss_pred CCeeeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCcC-----CCCccccchhccCCccccc
Confidence 99999999999999999999999999999999999999999999999999999998 8899999999999999999
Q ss_pred ceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCC-CCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcH
Q 008146 398 GAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYH-MTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDI 476 (576)
Q Consensus 398 GAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~-~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~ 476 (576)
|++++|||++++|+ +||++|+|+++++|+.+ ...+.|++.++.++|+++|++||++|+||||||+|||||+.||+
T Consensus 229 GagavvL~~l~~A~----~i~a~I~g~~~n~dg~~~~~~t~P~~~~q~~~i~~Al~~Agl~p~dIdyvEaHgTgT~~gD~ 304 (965)
T 3hhd_A 229 GVVAVLLTKKSLAR----RVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAPESFEYIEAHGTGTKVGDP 304 (965)
T ss_dssp EEEEEEEEEGGGCS----SCSEEEEEEEEEECCCCTTCTTSCCHHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCTTHHH
T ss_pred eEEEEEEecHHHcC----cccEEEEeeeccCCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHhccccccCCCCCCCCH
Confidence 99999999999885 49999999999999976 56778999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCC--CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCc----ccccCCcccc
Q 008146 477 KEYQALIHCFGQN--RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDT----NVLVGPKKER 550 (576)
Q Consensus 477 ~E~~Al~~~f~~~--~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~----~~~~~~~~~~ 550 (576)
+|.++|.++|+.. .+++|+++|+||||++||||+++++|++++|++++|||++|+++|||.++. ++.+..+..+
T Consensus 305 ~E~~Al~~~f~~~~~~~~~vgs~Ks~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~~v~~~~~~ 384 (965)
T 3hhd_A 305 QELNGITRALCATRQEPLLIGSTKSNMGHPEPASGLAALAKVLLSLEHGLWAPNLHFHSPNPEIPALLDGRLQVVDQPLP 384 (965)
T ss_dssp HHHHHHHHHHCSSCSSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCCSBCTTCHHHHHTSEEECCSCEE
T ss_pred HHHHHHHHHhcccCCCceeeeccccccccchhhhhHHHHHHHHHHHhcCCcCCccCCCCCCccCcccccCceeecCCCcc
Confidence 9999999999853 468999999999999999999999999999999999999999999999862 3445556677
Q ss_pred cCccEEEEeccCCCcceeEEEEeeC
Q 008146 551 LEVKAALSNSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 551 ~~~~~alv~sfG~gG~na~vil~~~ 575 (576)
|+.+++++|||||||+|+|+||++|
T Consensus 385 ~~~~~a~v~sfG~gG~Nah~il~~~ 409 (965)
T 3hhd_A 385 VRGGNVGINSFGFGGSNVHIILRPN 409 (965)
T ss_dssp CCSCEEEEEEECTTSEEEEEEEEEC
T ss_pred CCCCeEEEecccCCCceEEEEeccC
Confidence 7788999999999999999999987
|
| >2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-75 Score=673.40 Aligned_cols=432 Identities=25% Similarity=0.356 Sum_probs=363.9
Q ss_pred ccCCCChhHHHHHHHHHhhhcccccccccccccCCCCccccccCCCCCCCCcEEEEecceecCCC-CCHHHHHHHHHcCC
Q 008146 115 FFGSNNSTATLNRRQRRLRLNRVTRSGEAMAVAVQPDEEVTTKKKPHMKQKRVVVTGMGLVSPLG-HEPDVFYNNLLEGV 193 (576)
Q Consensus 115 ~Fd~pt~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~IaItGmg~~~P~g-~~~~~~w~~L~~G~ 193 (576)
-|||||+.+++.++.+......... .. . .. ......++|+||||||++|+| .++++||++|.+|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~-----~~-----~~~~~~~~iaIvG~~~~~Pgg~~~~~~~w~~L~~g~ 68 (917)
T 2hg4_A 3 GDNGMTEEKLRRYLKRTVTELDSVT---AR-L-----RE-----VEHRAGEPIAIVGMACRFPGDVDSPESFWEFVSGGG 68 (917)
T ss_dssp ------CHHHHHHHHHHHHHHHHHH---HH-H-----HH-----HHHHHHCCEEEEEEEEEBTTTBCSHHHHHHHHHTTC
T ss_pred CCCCCCHHHHHHHHHHHhhhhhhhh---hh-c-----cc-----ccccCCCCEEEEeceEECCCCCCCHHHHHHHHHcCC
Confidence 4899999999988876421111000 00 0 00 001123679999999999987 78999999999999
Q ss_pred CcceeccC---CCCCCCCcccccccc---CCCCCCC-CChhhhhcCCHHHHHHHHHHHHHHHhCCCChhhhhcccCCeeE
Q 008146 194 SGISEIET---FDCTSFPTKIAAEIK---SFSTDGW-VAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCG 266 (576)
Q Consensus 194 ~~i~~~~~---~~~~~~~~~~~g~v~---~fd~~~~-i~~~~a~~mdp~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~g 266 (576)
++|++++. |+. ....+.+++++ .||+.+| |+|++++.|||+++|+++++++||+|||++++ ++++.+||
T Consensus 69 ~~i~~~p~~r~~~~-~~~~~~~~~l~~~~~fD~~~f~i~~~ea~~mdp~~rl~leaa~eALedAGi~~~---~i~~~~~g 144 (917)
T 2hg4_A 69 DAIAEAPADRGWEP-DPDARLGGMLAAAGDFDAGFFGISPREALAMDPQQRIMLEISWEALERAGHDPV---SLRGSATG 144 (917)
T ss_dssp CCCEECCGGGCCCC-CSSCCEEBCCTTTTEECTGGGTCCHHHHHHSCHHHHHHHHHHHHHHHHTTCCGG---GGTTSCEE
T ss_pred CccccCCcccccCC-CCCcceeeEecCccccChhhcCCCHHHHHhcCHHHHHHHHHHHHHHHHcCCChH---HcCCcceE
Confidence 99998753 432 22345666665 5999888 99999999999999999999999999999987 67789999
Q ss_pred EEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCCCCccccccCCCchHHHHHHHHHHHHHcCCC
Q 008146 267 VLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEA 346 (576)
Q Consensus 267 V~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~ 346 (576)
||+|++..++.... .......+++.+++...++.++++++.||++||+++|+++|+||+.||++|+++|++|+|
T Consensus 145 V~vG~~~~d~~~~~------~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~Gps~tv~taCsSsl~Al~~A~~~I~~G~~ 218 (917)
T 2hg4_A 145 VFTGVGTVDYGPRP------DEAPDEVLGYVGTGTASSVASGRVAYCLGLEGPAMTVDTACSSGLTALHLAMESLRRDEC 218 (917)
T ss_dssp EEEEECCCCCSCCT------TSSCGGGGGGHHHHHCHHHHHHHHHHHHTCCSCEEEEECGGGHHHHHHHHHHHHHHTTSC
T ss_pred EEEEeCCchhhhhh------hcCccccCcccccccccchHHHHHHHhcCCCCCeEeecCCcHHHHHHHHHHHHHHHcCCC
Confidence 99999876553211 112233455566667778899999999999999999999999999999999999999999
Q ss_pred CEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEE
Q 008146 347 NVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSF 426 (576)
Q Consensus 347 d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~ 426 (576)
|++||||+|.++.|..+..|..+++++ |++.|+|||.++||+++|||+++||||++++|+++|++||++|+|+++
T Consensus 219 d~aLvgGv~~~~~p~~~~~~~~~~~ls-----~~g~~~pFd~~adG~~~gEGagavVL~~l~~A~~~g~~i~a~I~G~~~ 293 (917)
T 2hg4_A 219 GLALAGGVTVMSSPGAFTEFRSQGGLA-----ADGRCKPFSKAADGFGLAEGAGVLVLQRLSAARREGRPVLAVLRGSAV 293 (917)
T ss_dssp SEEEEEEEECCCSTHHHHHHTTSSCBC-----TTSCCCTTBTTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEE
T ss_pred CEEEEeEeccccChhhhHhhhhccCcC-----CccccCcccccccCCCCcceEEEEEEeeHHHHHhCCCCeEEEEEEEEE
Confidence 999999999999998888888888888 788999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCC----CCccccccccccc
Q 008146 427 TSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN----RGLRVNSTKSMIG 502 (576)
Q Consensus 427 ~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~----~~~~v~s~K~~iG 502 (576)
++|+.+...+.|++.++.++|+++|+++|++|+||||||+|||||++||++|.++|.++|+.. .+++++++|+++|
T Consensus 294 ~~dg~~~~~~~P~~~~q~~ai~~Al~~Agl~p~dId~veaHgtgT~~gD~~E~~al~~~fg~~~~~~~~~~vgs~K~~iG 373 (917)
T 2hg4_A 294 NQDGASNGLTAPSGPAQQRVIRRALENAGVRAGDVDYVEAHGTGTRLGDPIEVHALLSTYGAERDPDDPLWIGSVKSNIG 373 (917)
T ss_dssp EECCSCSSSSCCCHHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCTTHHHHHHHHHHTTTTTSSCTTSCCEEECTHHHHC
T ss_pred ecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEeeccCCCccCcHHHHHHHHHHhccccCCCCceeccCccccee
Confidence 999999888899999999999999999999999999999999999999999999999999853 3588999999999
Q ss_pred ccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcc---cccCCccccc----CccEEEEeccCCCcceeEEEEeeC
Q 008146 503 HLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTN---VLVGPKKERL----EVKAALSNSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 503 H~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~---~~~~~~~~~~----~~~~alv~sfG~gG~na~vil~~~ 575 (576)
|+++|+|+++++|++++|+++.|||++|+++|||.++++ +.+..+.++| .+|++++|||||||+|+|+||++|
T Consensus 374 H~~~AaG~~~lik~vl~L~~~~ipp~~~~~~~~p~i~~~~~~~~v~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~ 453 (917)
T 2hg4_A 374 HTQAAAGVAGVMKAVLALRHGEMPRTLHFDEPSPQIEWDLGAVSVVSQARSWPAGERPRRAGVSSFGISGTNAHVIVEEA 453 (917)
T ss_dssp BCGGGTTHHHHHHHHHHHHHTEECCCTTCCSBCTTSCC---CCEECCSCEECCCCSSCCEEEEEEECTTSEEEEEEEEEC
T ss_pred cchhhhHHHHHHHHHHHHhcCCcCCCCCCCCCCccCCccccceeecCCcccCCCCCCCCEEEEeeecCCCceEEEEeccC
Confidence 999999999999999999999999999999999999764 3333333444 468999999999999999999986
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-74 Score=718.07 Aligned_cols=394 Identities=25% Similarity=0.381 Sum_probs=355.1
Q ss_pred CCcEEEEecceecCCCCCHHHHHHHHHcCCCcceecc-CCCCCCCC-ccccccc---cCCCCCCC-CChhhhhcCCHHHH
Q 008146 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIE-TFDCTSFP-TKIAAEI---KSFSTDGW-VAPKLSKRMDKFML 237 (576)
Q Consensus 164 ~~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~-~~~~~~~~-~~~~g~v---~~fd~~~~-i~~~~a~~mdp~~r 237 (576)
|++||||||||++|++.++++||++|.+|++++++.+ +|+...+. ....+.+ +.||+.+| |+|+|++.||||||
T Consensus 1 m~~iaI~G~~~~~p~~~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fd~~~f~i~~~ea~~~dpq~r 80 (2512)
T 2vz8_A 1 MEEVVIAGMSGKLPESENLEEFWANLIGGVDMVTADDRRWKAGLYGLPRRMGKLKDLSRFDASFFGVHSKQANTMDPQLR 80 (2512)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECSSSSCTTGGGCCSEEECCSCSSCCCTTTTTCCHHHHHTSCHHHH
T ss_pred CCCEEEEeeeeeCCCCCCHHHHHHHHHcCCccccCCCcccccccccCcccceecCCcccCCHhhcCCCHHHHHhcCHHHH
Confidence 3689999999999999999999999999999999875 35543221 2334444 45999999 99999999999999
Q ss_pred HHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCCC
Q 008146 238 YLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM 317 (576)
Q Consensus 238 l~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~ 317 (576)
|+++++||||+|||++++ .+++++||||+|++.+++.. .+.......+++.+++...++++++|++.|||+
T Consensus 81 l~l~~~~eAle~Ag~~~~---~~~~~~~gv~~G~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l~ 151 (2512)
T 2vz8_A 81 MLLEVTYEAIVDGGINPA---SLRGTSTGVWVGVSSSDASE------ALSRDPETLVGYSMIGCQRAMMANRLSFFFDFK 151 (2512)
T ss_dssp HHHHHHHHHHGGGTCCGG---GGTTCSCEEEEEECCCHHHH------HTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHCCCChh---hcCCCCeEEEEEeccHHHHH------HHhcCccccCcceecccchhHHHHHHHHHhCCC
Confidence 999999999999999986 67899999999998765432 222334566788888999999999999999999
Q ss_pred CccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecC
Q 008146 318 GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGE 397 (576)
Q Consensus 318 Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gE 397 (576)
||+++|+|+|+||++||++|+++|++|+||+|||||+|.+++|..+..|.++++|+ |++.|||||.++|||++||
T Consensus 152 Gps~tv~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~p~~~~~~~~~~~ls-----~~g~c~~Fd~~adG~~~gE 226 (2512)
T 2vz8_A 152 GPSITIDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSLQFMKLGMLS-----QDGTCRSFDAEGTGYCRAE 226 (2512)
T ss_dssp SCEEEEECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCCHHHHHHHHHTTCBC-----TTCSCCSSSTTCCCBCBBC
T ss_pred CCceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccCHHHHHHHccCCCCC-----CCCCCCCCCCCCCCcceee
Confidence 99999999999999999999999999999999999999999999999999999999 8899999999999999999
Q ss_pred ceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCC-CCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcH
Q 008146 398 GAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYH-MTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDI 476 (576)
Q Consensus 398 GAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~-~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~ 476 (576)
|+|+||||++++|+ +|||+|+|+++++||++ ...+.|++.+|.++|++||++||++|+||+|||+|||||+.||+
T Consensus 227 G~~~~vLk~l~~A~----~i~a~i~g~~~n~dg~~~~~~t~P~~~~q~~~i~~al~~ag~~p~~i~yveaHGTgT~~gD~ 302 (2512)
T 2vz8_A 227 AVVAVLLTKKSLAR----RVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPDPESLEYIEAHGTGTKVGDP 302 (2512)
T ss_dssp EEEEEEEEEGGGCS----CCSEEEEEEEEEECCCCTTCSSSCCHHHHHHHHHTTSGGGSSCTTSCCEEECCCCCCTTHHH
T ss_pred eEEEEEEEEHHHCC----cccEEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEeecCCCCCCCH
Confidence 99999999999985 59999999999999974 56778999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCC--CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCC-c---ccccCCcccc
Q 008146 477 KEYQALIHCFGQN--RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD-T---NVLVGPKKER 550 (576)
Q Consensus 477 ~E~~Al~~~f~~~--~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~-~---~~~~~~~~~~ 550 (576)
+|.+||.++|+.. .+++|+|+|+||||+++|||++++||++++|+||.|||++|+++|||.++ + ++.+..+..+
T Consensus 303 ~E~~al~~~f~~~~~~~~~igS~Ks~iGH~~~AaG~~~~ik~~l~l~~~~ipp~~~~~~~~p~~~~~~~~~~~~~~~~~~ 382 (2512)
T 2vz8_A 303 QELNGIVNALCATRREPLLIGSTKSNMGHPEPASGVAALIKVLLSLEHGVWAPNLHYHTPNPEIPALQDGRLQVVDRPLP 382 (2512)
T ss_dssp HHHHHHHHHHCSCSSSCCEEECHHHHHCBCGGGHHHHHHHHHHHHHTTTBCCCCSSCCSCCTTSSSSSSSSCEECCSCCB
T ss_pred HHHHHHHHHhcccCCCCceeecccccccccccccchhHHHHHHHHHHCCCcCCCCCCCCCCccccccccCceEecCCCcc
Confidence 9999999999864 46899999999999999999999999999999999999999999999986 3 3445455667
Q ss_pred cCccEEEEeccCCCcceeEEEEeeC
Q 008146 551 LEVKAALSNSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 551 ~~~~~alv~sfG~gG~na~vil~~~ 575 (576)
|+.+++++|||||||+|+|+||++|
T Consensus 383 ~~~~~a~vnsfG~gG~Nah~il~~~ 407 (2512)
T 2vz8_A 383 IRGGNVGINSFGFGGSNVHVILQPN 407 (2512)
T ss_dssp CCSCCEEEEEEETTTEEEEEEEEEC
T ss_pred CCCCeEEEeccCCCCceeEEEEccC
Confidence 7778899999999999999999986
|
| >2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-73 Score=655.15 Aligned_cols=397 Identities=26% Similarity=0.416 Sum_probs=353.8
Q ss_pred CCcEEEEecceecCCC-CCHHHHHHHHHcCCCcceeccC---CCCCCC-----------Ccccccccc---CCCCCCC-C
Q 008146 164 QKRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIET---FDCTSF-----------PTKIAAEIK---SFSTDGW-V 224 (576)
Q Consensus 164 ~~~IaItGmg~~~P~g-~~~~~~w~~L~~G~~~i~~~~~---~~~~~~-----------~~~~~g~v~---~fd~~~~-i 224 (576)
.++||||||||++|+| .++++||++|.+|++++++++. |+...+ +.+.+++++ .||+.+| |
T Consensus 5 ~~~iaIvG~~~~~P~g~~~~~~~w~~L~~g~~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~FD~~~f~i 84 (915)
T 2qo3_A 5 SDPIAIVSMACRLPGGVNTPQRLWELLREGGETLSGFPTDRGWDLARLHHPDPDNPGTSYVDKGGFLDDAAGFDAEFFGV 84 (915)
T ss_dssp CCCEEEEEEEEECSTTCCSHHHHHHHHHTTCCCCEECCSSSCCCHHHHBCSCTTSTTCBSCCEEBCCSCSSEECHHHHTC
T ss_pred CCCEEEEeeEEECCCCCCCHHHHHHHHHcCCCcccCCCccccCChhhccCcccccCCCcccceeEEeCCccccCHhhcCC
Confidence 4679999999999998 9999999999999999998753 543221 234566665 5898888 9
Q ss_pred ChhhhhcCCHHHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccc
Q 008146 225 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTN 304 (576)
Q Consensus 225 ~~~~a~~mdp~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 304 (576)
++++++.|||+++|+++++++||+|||++++ ++++.++|||+|++.+++.... .....++++.+++...+
T Consensus 85 ~~~ea~~mdp~~rL~leaa~eALedAGi~~~---~i~~~~~gV~vG~~~~~~~~~~-------~~~~~~~~~~~~g~~~~ 154 (915)
T 2qo3_A 85 SPREAAAMDPQQRLLLETSWELVENAGIDPH---SLRGTATGVFLGVAKFGYGEDT-------AAAEDVEGYSVTGVAPA 154 (915)
T ss_dssp CHHHHHTSCHHHHHHHHHHHHHHHHTTCCGG---GGTTBCCEEEEECCCCCTTTTC-------C---CTTCHHHHTTCHH
T ss_pred CHHHHHhCCHHHHHHHHHHHHHHHHcCCChH---HcCCcceEEEEEecCchHHhhh-------ccccccccccccccccc
Confidence 9999999999999999999999999999987 6778999999999877654221 11234566677777888
Q ss_pred hhHHHHHHHhCCCCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCC
Q 008146 305 MGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASR 384 (576)
Q Consensus 305 ~~a~~ia~~lgl~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~r 384 (576)
+.+++|++.||++||+++|+++|+||++||++|+++|++|+||+|||||+|.+++|..+..|..+++++ |++.|+
T Consensus 155 ~~a~ris~~lgl~Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~~~~~~~~~~~ls-----~~g~~~ 229 (915)
T 2qo3_A 155 VASGRISYTMGLEGPSISVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGVFVDFSRQRALA-----ADGRSK 229 (915)
T ss_dssp HHHHHHHHHHTBCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTHHHHHHHTTTCBC-----SSCCCC
T ss_pred HHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHHHHHHHhhhcccC-----CCCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999988 788999
Q ss_pred CCccCCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEE
Q 008146 385 PWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYI 464 (576)
Q Consensus 385 pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~v 464 (576)
|||.+++|+++|||++++|||++++|+++|++||++|+|+++++|+.+...+.|++.++.++|+++|+++|++|+|||||
T Consensus 230 ~Fd~~adG~v~gEGagavVL~~~~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~p~~~~~~~~i~~Al~~Agl~p~dId~v 309 (915)
T 2qo3_A 230 AFGAGADGFGFSEGVTLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALESCGLEPGDVDAV 309 (915)
T ss_dssp TTBTTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSTTCCCHHHHHHHHHHHHHHTTCCGGGCCEE
T ss_pred cccCCCCceeecCceEEEEEeEhHHhhhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCcEE
Confidence 99999999999999999999999999999999999999999999999988899999999999999999999999999999
Q ss_pred EecCCCCccCcHHHHHHHHHHHcCC----CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCc
Q 008146 465 NAHATSTPAGDIKEYQALIHCFGQN----RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDT 540 (576)
Q Consensus 465 e~Hgtgt~~gD~~E~~Al~~~f~~~----~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~ 540 (576)
|+|||||++||++|..+|.++|+.. .+++++++|+++||+++|+|+++++|++++|+++.|||++|+++|||.+++
T Consensus 310 e~HgtgT~~gD~~E~~al~~~f~~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~~l~L~~~~ipp~~~~~~~~p~~~~ 389 (915)
T 2qo3_A 310 EAHGTGTALGDPIEANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGELPATLHVEEPTPHVDW 389 (915)
T ss_dssp ECCCCCCTTTHHHHHHHHHHHTSSSCCTTSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCSSBCTTSCC
T ss_pred EecCCCCccCCHHHHHHHHHHhccccCCCCcccccCcccceeCCccccchHHHHHHHHHHhcCCCCCCCCCCCCCccccc
Confidence 9999999999999999999999853 358899999999999999999999999999999999999999999999876
Q ss_pred c---cccCCccccc----CccEEEEeccCCCcceeEEEEeeC
Q 008146 541 N---VLVGPKKERL----EVKAALSNSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 541 ~---~~~~~~~~~~----~~~~alv~sfG~gG~na~vil~~~ 575 (576)
. +.+..+..+| .+|++++|||||||+|+|+||++|
T Consensus 390 ~~~~~~~~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~ 431 (915)
T 2qo3_A 390 SSGGVALLAGNQPWRRGERTRRAAVSAFGISGTNAHVIVEEA 431 (915)
T ss_dssp SSSSEEECSSCEECCSSSSCCEEEEEEECTTSEEEEEEEEEC
T ss_pred ccCceeeecCCcccccCCCCcEEEEeeecCCCceEEEEEeec
Confidence 3 3333323332 468999999999999999999987
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-70 Score=628.01 Aligned_cols=459 Identities=23% Similarity=0.273 Sum_probs=369.7
Q ss_pred cccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHHhhhcccccccccccccCCCCccccccCCCCCCCCcEE
Q 008146 89 LPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRRLRLNRVTRSGEAMAVAVQPDEEVTTKKKPHMKQKRVV 168 (576)
Q Consensus 89 ~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~Ia 168 (576)
...|+||||...||+| +|.+++||||+|.+ ..+++... +...... .......+.... ....++++
T Consensus 890 i~~~~~~~i~~~tGiR-----l~~~~~fd~~~p~~-~~~L~e~~-l~~d~~~---~~~s~~~a~~~~-----~~~~d~v~ 954 (1688)
T 2pff_A 890 VKAKYETSILEHSGIR-----LIEPELFNGYNPEK-KEMIQEVI-VEEDLEP---FEASKETAEQFK-----HQHGDKVD 954 (1688)
T ss_dssp CTTTSSSSSSSGGGTT-----TSSSSCCSSSSSSC-CSSSEECC-CCCCCSC---CCCCCCCTTHHH-----HHHHHSCT
T ss_pred HHHHHHHHHHHhcCCC-----CCCCccCCCCCHHH-HhHhhHHh-cCCCCcc---cccChhhhhhcc-----ccCCCCeE
Confidence 3457899999999999 99999999999984 22222210 0000000 000000000000 00112344
Q ss_pred EEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCCCcccccccc-CCCCCCC-CChhhhhcCCHHHHHHHHHHHHH
Q 008146 169 VTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIK-SFSTDGW-VAPKLSKRMDKFMLYLLTAGKKA 246 (576)
Q Consensus 169 ItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~-~fd~~~~-i~~~~a~~mdp~~rl~l~aa~eA 246 (576)
|+. -.++++||++|.+|++.+.+. ...++...+|+++ +||+.+| |++++++.|||+++|+++++++|
T Consensus 955 I~~-------i~~~eefW~~L~~G~~~i~p~----~~~~~~~vaG~Ip~gFD~~~fGIs~~ea~~mDP~qrLaLeAa~EA 1023 (1688)
T 2pff_A 955 IFE-------IPETGEYSVKLLKGATLYIPK----ALRFDRLVAGQIPTGWNAKTYGISDDIISQVDPITLFVLVSVVEA 1023 (1688)
T ss_dssp TSC-------CCCCCSSSCCCCCCTTCCCCC----CCCEECCSSCSCCCCCCCCCSSCCTTTBTTBCSSTTHHHHHHHHH
T ss_pred Eec-------CCCHHHHHHHHHcCCCEEecC----CCCCCceEEEEECCCCChhhCCCCHHHHhccCHHHHHHHHHHHHH
Confidence 442 246789999999999999873 3345667889997 7999999 99999999999999999999999
Q ss_pred HHhCCCC-hhhh-hcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHH-HhCCCCccccc
Q 008146 247 LADGGIT-EDVM-NELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAM-DLGWMGPNYSI 323 (576)
Q Consensus 247 L~dAGi~-~~~i-~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~-~lgl~Gp~~tv 323 (576)
|+||||+ |.++ ..++..++|||+|++.+++......+.... ......++.++....|..++++++ .||++||+++|
T Consensus 1024 LedAGI~dP~ei~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~-~~~~v~~~~l~~~~~nt~Aa~Vs~~~LGl~GPs~TV 1102 (1688)
T 2pff_A 1024 FIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRF-KDEPVQNDILQESFINTMSAWVNMLLISSSGPIKTP 1102 (1688)
T ss_dssp HTTTTCSSGGGGGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSS-SCCCCCSTTHHHHCTHHHHHHHHHSSCCCCCCCCCC
T ss_pred HHHcCCCChHHhccccCCceEEEEecccCCCHHHHHHHHHHHH-hcCCCCcchhccccHHHHHHHHHHHHcCCcCCeEEe
Confidence 9999998 6532 126789999999999998876665443211 113356666777788999999999 79999999999
Q ss_pred cCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhcc------CCCCCCCCCCCccCCCcceecC
Q 008146 324 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR------NNDPTKASRPWDINRDGFVMGE 397 (576)
Q Consensus 324 ~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~------~~~p~~~~rpfd~~~~G~v~gE 397 (576)
+++|+||+.||+.|+++|++|+||+|||||+|.+ ++..+..|..+++++.. +.+|++.|||||.+++||++||
T Consensus 1103 dtACASSL~AL~lA~~aIrsGeaDvaLVGGvE~m-sp~~~~~Fa~mgaLS~~~~e~a~G~~Pd~~cRPFd~~rdGfv~GE 1181 (1688)
T 2pff_A 1103 VGACATSVESVDIGVETILSGKARICIVGGYDDF-QEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNGFMEAQ 1181 (1688)
T ss_dssp CCTTTTTHHHHHHHHHHHHTTTCSCBCCCCCCCC-CTTTTTTTTTTSCSCCTTTTTTSSCCSSSSCCSSSSSCCCCCCCS
T ss_pred cCCCchHHHHHHHHHHHHHCCCCCEEEEeeeccC-CHHHHHHHHhccccccChhhhhcCCChhhccCcCccCCCCCcccc
Confidence 9999999999999999999999999999999984 67777789999988853 4568999999999999999999
Q ss_pred ceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCC------------------hH------------------
Q 008146 398 GAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD------------------GV------------------ 441 (576)
Q Consensus 398 GAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~------------------~~------------------ 441 (576)
|+|++||+++++|+++|++||++|+|+++++|+.+.+.+.|. +.
T Consensus 1182 GAGavVLesle~Al~~G~~IyAvI~GsavnsDg~~~SipAPg~GiLt~Ar~~~G~~taPSp~ld~~~R~rql~~~~~~i~ 1261 (1688)
T 2pff_A 1182 GAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQIK 1261 (1688)
T ss_dssp CCEEEEEECSHHHHSSSCCCCCEECCCCCCCCCCCSSSCCCCSSSSSSSSSCCCCSSCSSCCSCTTCCHHHHSHHHHHHH
T ss_pred ceEEEEeCcHHHHHHCCCceEEEEEEEEEECCCCccCCCCCCCCccchhhhcccccCCCCcccChHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999876554442 10
Q ss_pred -------------------------HH-------------------------------HHHHHHHHHHcCCCCCCccEEE
Q 008146 442 -------------------------GV-------------------------------ILCIEKALAHSGVSREDVNYIN 465 (576)
Q Consensus 442 -------------------------~~-------------------------------~~ai~~AL~~Agl~~~dId~ve 465 (576)
.| ..+|++||+++|++++||||||
T Consensus 1262 ~~~~~e~~~l~~e~~~~g~~~~~~~aQer~~~i~~~~~r~~~~~~~~~Gn~f~~~d~~~~aIr~ALa~AGLtpdDIdyVE 1341 (1688)
T 2pff_A 1262 DWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLGVAS 1341 (1688)
T ss_dssp HHHHHHHHHHHHHSSSSCSSHHHHHHHHHHHHTHHHHHHHHHHHHHTTTTSSSSSCTTCCSHHHHTTSSCSSTTCCCCCC
T ss_pred HHHHhhHHHHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHHHHHhccCCceecchHHHHHHHHHHHHcCCCHHHeeEEE
Confidence 22 4789999999999999999999
Q ss_pred ecCCCCccCcHHHHHHHHHHHcC-----CCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCC-
Q 008146 466 AHATSTPAGDIKEYQALIHCFGQ-----NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD- 539 (576)
Q Consensus 466 ~Hgtgt~~gD~~E~~Al~~~f~~-----~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~- 539 (576)
+|||||++||++|.++|.++|+. ..++++++.|+++||++||||++++++++++|++|.|||++|+++|++.++
T Consensus 1342 aHGTGT~lgD~iE~~AL~~af~~~gr~~g~pl~V~S~KsliGHp~GAAGa~~Lik~llaL~~G~IPptln~d~pdp~l~~ 1421 (1688)
T 2pff_A 1342 FHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKILEQ 1421 (1688)
T ss_dssp CCCCSCSSSSTTTTTTTGGGTGGGCCCTTCCCCCCCCTTTTCCCSSTHHHHHHHHHHHHSTTCCCCCCSCCSCCCTTCCS
T ss_pred EeCCCCccccHHHHHHHHHHHhhhCcCCCCeEEEEeChhhhcchHHHhhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCc
Confidence 99999999999999999999974 135899999999999999999999999999999999999999999999985
Q ss_pred ccccc-CCccccc-CccEEEEeccCCCcceeEEEEeeC
Q 008146 540 TNVLV-GPKKERL-EVKAALSNSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 540 ~~~~~-~~~~~~~-~~~~alv~sfG~gG~na~vil~~~ 575 (576)
++++. ..+..++ .+|++++|||||||+|+|+|++++
T Consensus 1422 ~d~v~~p~~~~~~~~~r~AlVnSFGFGGtNAhvILe~p 1459 (1688)
T 2pff_A 1422 FEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVHP 1459 (1688)
T ss_dssp SCCCCSCTTCCSSSSSSCCCCCCCCSTTCCCCCCEECS
T ss_pred CCceeecCccccCCCCcEEEEeeECCCCeeEEEEEeCC
Confidence 44432 2333344 589999999999999999999875
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-68 Score=631.00 Aligned_cols=456 Identities=24% Similarity=0.270 Sum_probs=374.7
Q ss_pred ccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHHhhhcccccccccccccCCCCccccccCCCCCCCCcEEEEe
Q 008146 92 EPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRRLRLNRVTRSGEAMAVAVQPDEEVTTKKKPHMKQKRVVVTG 171 (576)
Q Consensus 92 el~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~IaItG 171 (576)
|+||+|...||+| ++.+.+||||+|.++ ++..+ ....... +.. .. +.... ...+....+++.|+.
T Consensus 1067 ~~~~~i~~~tgir-----~~~~~~fd~~~p~~~--~~~~~--~~~~~~~-~~~-~~--~~~~a--~~~~~~~~~~~~i~~ 1131 (1878)
T 2uv9_A 1067 KYEKYILEHSGIR-----LIEPELFGGYDPNRK--QLLQE--VVIEQDL-EPF-EA--SKEQA--EEFKREHGDKVEIFE 1131 (1878)
T ss_dssp HHHHHHHHTSEEE-----ECCGGGGTTCCGGGE--EEEEE--EECCSCC-CCE-EE--CHHHH--HHHHHHHGGGEEEEE
T ss_pred HHHHHHHHhcCCC-----CCcccccCCCCHHHH--HHHHH--hhcccCC-Ccc-cc--Chhhh--hhccccCCCCeeEee
Confidence 7799999999999 999999999999854 22222 1100000 000 00 00000 000011235677763
Q ss_pred cceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCCCcccccccc-CCCCCCC-CChhhhhcCCHHHHHHHHHHHHHHHh
Q 008146 172 MGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIK-SFSTDGW-VAPKLSKRMDKFMLYLLTAGKKALAD 249 (576)
Q Consensus 172 mg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~-~fd~~~~-i~~~~a~~mdp~~rl~l~aa~eAL~d 249 (576)
..++++||++|.+|++++.+.. ..++...+|+++ +||+.+| |++++++.|||+++|+++++++||+|
T Consensus 1132 -------~~~~~~~w~~L~~G~~~i~p~~----~~~~~~~aG~i~~~FD~~~fgI~~~ea~~mDp~~~l~L~aa~eAL~~ 1200 (1878)
T 2uv9_A 1132 -------IPETGQYTVRLRKGATLLIPKA----LQFDRLVAGQIPTGWDARRYGVPEDIIQQVDPVTLYVLVSVAEALLS 1200 (1878)
T ss_dssp -------CTTTSCEEEEECTTCEEEEEEE----ECCSCCEEEECCTTCCHHHHTCCHHHHHHSCHHHHHHHHHHHHHHHT
T ss_pred -------CCChHHHHHHHHcCCCeeeecC----CCCcceEEEEeCCCCCHhhcCCCHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 3577899999999999998842 345677889997 7999988 99999999999999999999999999
Q ss_pred CCCC-hhhh-hcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHH-HhCCCCccccccCC
Q 008146 250 GGIT-EDVM-NELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAM-DLGWMGPNYSISTA 326 (576)
Q Consensus 250 AGi~-~~~i-~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~-~lgl~Gp~~tv~ta 326 (576)
|||+ |.++ +.++..++|||+|++.+++......+.... ......++.++....|..++++++ .||++||+++++++
T Consensus 1201 AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~-~~~~v~~~~~~~~~~n~~aa~vs~~~lg~~GP~~tv~tA 1279 (1878)
T 2uv9_A 1201 SGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRY-LDKPVQKDILQESFVNTMAAWVNMLLLSSTGPIKTPVGA 1279 (1878)
T ss_dssp TTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTT-TTCCCCSCTTGGGSHHHHHHHHHHHTCCCCCCBCCBCCG
T ss_pred CCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHH-hcCCCCchhhhcchHHHHHHHHHHHhcCCCCCeEEEcCc
Confidence 9998 6532 226789999999999999876665443221 123467777888889999999999 59999999999999
Q ss_pred CchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhcc------CCCCCCCCCCCccCCCcceecCceE
Q 008146 327 CATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR------NNDPTKASRPWDINRDGFVMGEGAG 400 (576)
Q Consensus 327 CaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~------~~~p~~~~rpfd~~~~G~v~gEGAa 400 (576)
|+||+.||+.|++.|++|+||+|||||+|. +++.....|..+++++.. +.+|++.|||||..++||++|||+|
T Consensus 1280 CASsl~Al~~A~~~I~sG~advalvGGvd~-~~~~~~~~f~~m~als~~~de~a~g~~p~~~~RPfd~~r~Gfv~gEGag 1358 (1878)
T 2uv9_A 1280 CATAVESLDVGYDTIMQGKARVCLVGGFDD-FQEEGSYEFANMGATSNAKEEFARGREPGEMSRPTSTTRNGFMESQGCG 1358 (1878)
T ss_dssp GGHHHHHHHHHHHHHTTTSCSEEEEEEEEC-CCHHHHHHHHHHTCBCCHHHHHTTTCCTTSSCCSSBTTCCCBCBBCEEE
T ss_pred chHHHHHHHHHHHHHHcCCCCEEEEeeecc-CChHHHHHHHHhhhhccchhhhhcCCCcccCcCCCccCCCCCcccceeE
Confidence 999999999999999999999999999998 678888899999999852 5679999999999999999999999
Q ss_pred EEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCC-h---------------------------------------
Q 008146 401 VLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD-G--------------------------------------- 440 (576)
Q Consensus 401 alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~-~--------------------------------------- 440 (576)
++||+++++|+++|++||++|+|+++++|+.+.+.|.|. +
T Consensus 1359 ~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~~t~ar~~~~~~ps~~~~~~~r~~~~~~~~~~i~~~~~~ 1438 (1878)
T 2uv9_A 1359 VQVIMTAQLALEMGVPIYGIVAMTSTATDKIGRSVPAPGQGVLTTAREKSGNFPSPLLDIKYRRRQLELRRQQIKQWKES 1438 (1878)
T ss_dssp EEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCSSCCCSCGGGGGCCCCCSSCCGGGSHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeeHHHHHHCCCceEEEEEEEEEecCCCccCCCCCCcchhhhhhhccccCCCcccchHHHHHHHHHHHHHHHHhhhh
Confidence 999999999999999999999999999999987766661 1
Q ss_pred ---------------------------HHHH-------------------------------HHHHHHHHHcCCCCCCcc
Q 008146 441 ---------------------------VGVI-------------------------------LCIEKALAHSGVSREDVN 462 (576)
Q Consensus 441 ---------------------------~~~~-------------------------------~ai~~AL~~Agl~~~dId 462 (576)
..|. .+|++||+++|++++|||
T Consensus 1439 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~Q~~~~~i~~~~~~q~~~a~~~~g~~~~~~~~~~~~ir~ALa~aGl~~~DId 1518 (1878)
T 2uv9_A 1439 EYLYLQEEVAAIKSQRSEEDGPFDETAYLRERTEHIEREARRQEAEAQTSFGNEFWRRDSRIAPLRGALATWGLTIDDLG 1518 (1878)
T ss_dssp HHHHHHHHHHHTTTTCCSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTTCTTSCHHHHHHHTTTCCGGGEE
T ss_pred hhhhhhHHHHhhhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccChHHHHHHHHHHHcCCCHHHee
Confidence 1222 789999999999999999
Q ss_pred EEEecCCCCccCcHHHHHHHHHHHcC-----CCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCC
Q 008146 463 YINAHATSTPAGDIKEYQALIHCFGQ-----NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAV 537 (576)
Q Consensus 463 ~ve~Hgtgt~~gD~~E~~Al~~~f~~-----~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~ 537 (576)
|||+|||||++||++|.++|.++|+. ..++++++.|+++||++||+|++++++++++|++|.|||++|+++|++.
T Consensus 1519 ~veaHGTgT~~gD~~E~~al~~~f~~~~r~~~~pl~v~s~KsliGH~~gAAGa~~li~~l~~L~~g~iPp~~n~d~~dp~ 1598 (1878)
T 2uv9_A 1519 VASFHGTSTVANDKNESDVICQQLKHLGRTKGNAVLGIFQKYLTGHPKGAAGAWMLNGCLQVLNTGIVPGNRNADNVDKV 1598 (1878)
T ss_dssp EEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCTTCHHHHHHHHHHHHHTTCEECCCTTCCSBCGG
T ss_pred EEEEcCCCCcccCHHHHHHHHHHHhhcCCCCCCceeEEecccccCChHhHhhHHHHHHHHHHHhcCCCCCCCCCCCCCCc
Confidence 99999999999999999999999974 1358999999999999999999999999999999999999999999999
Q ss_pred CC-ccccc-CCccccc-CccEEEEeccCCCcceeEEEEeeC
Q 008146 538 VD-TNVLV-GPKKERL-EVKAALSNSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 538 ~~-~~~~~-~~~~~~~-~~~~alv~sfG~gG~na~vil~~~ 575 (576)
++ ++++. ..+..++ .+|++++|||||||+|+|+|++++
T Consensus 1599 i~~~~~v~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~p 1639 (1878)
T 2uv9_A 1599 MEQFDYIVYPSRSIKTDGIKAFSVTSFGFGQKGAQAIGVHP 1639 (1878)
T ss_dssp GGGCTTEECCSSCEECSCCCEEEEEEEETTTEEEEEEEECT
T ss_pred cccccccccccccccCCCCCEEEEccCCCCCeeEEEEEecC
Confidence 84 55532 2222222 589999999999999999999875
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-67 Score=630.08 Aligned_cols=459 Identities=23% Similarity=0.267 Sum_probs=374.3
Q ss_pred cccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHHhhhcccccccccccccCCCCccccccCCCCCCCCcEE
Q 008146 89 LPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRRLRLNRVTRSGEAMAVAVQPDEEVTTKKKPHMKQKRVV 168 (576)
Q Consensus 89 ~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~Ia 168 (576)
...++||+|...||+| ++.+.+||||+|.+ ..+++.. .+...... ... .++.+ ........++|+
T Consensus 1089 i~~~~~~~i~~~tgir-----~~~~~~fd~~~p~~-~~~l~~~-~~~~~~~~---~~~----~~~~a-~~~~~~~~~~~~ 1153 (1887)
T 2uv8_A 1089 VKAKYETSILEHSGIR-----LIEPELFNGYNPEK-KEMIQEV-IVEEDLEP---FEA----SKETA-EQFKHQHGDKVD 1153 (1887)
T ss_dssp HHHHHHHHHHHTSSEE-----ECCGGGGTTCCTTS-EEEEEEE-ECSSCCCC---EEE----CHHHH-HHHHHHHGGGEE
T ss_pred hHHHHHHHHHHhcCCC-----CCCcccCCCCCHHH-HHHHHHH-Hhcccccc---ccc----Cccch-hhHhhcCCCcee
Confidence 3456799999999999 99999999999973 1112111 00000000 000 00000 000011245688
Q ss_pred EEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCCCcccccccc-CCCCCCC-CChhhhhcCCHHHHHHHHHHHHH
Q 008146 169 VTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIK-SFSTDGW-VAPKLSKRMDKFMLYLLTAGKKA 246 (576)
Q Consensus 169 ItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~-~fd~~~~-i~~~~a~~mdp~~rl~l~aa~eA 246 (576)
|++ ..++++||++|.+|++++.+.. ..++..++|+++ +||+.+| |++++++.|||+++|+++++++|
T Consensus 1154 I~~-------~~~~~~~w~~L~~G~~~i~p~~----~~~~~~~aG~i~~~FD~~~fgI~~~ea~~mDp~~~l~L~aa~eA 1222 (1887)
T 2uv8_A 1154 IFE-------IPETGEYSVKLLKGATLYIPKA----LRFDRLVAGQIPTGWNAKTYGISDDIISQVDPITLFVLVSVVEA 1222 (1887)
T ss_dssp EEE-------CTTTSCEEEEECTTCEEEEEEE----ECCSCCEEECCCTTCCTTTTTCCHHHHHHSCHHHHHHHHHHHHH
T ss_pred Eee-------cCchHHHHHHHHcCCceeeccc----CCCCccEEEEECCCCChhhcCCCHHHHHhcCHHHHHHHHHHHHH
Confidence 875 2467899999999999998853 245678889997 7999999 99999999999999999999999
Q ss_pred HHhCCCC-hhhh-hcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHH-hCCCCccccc
Q 008146 247 LADGGIT-EDVM-NELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD-LGWMGPNYSI 323 (576)
Q Consensus 247 L~dAGi~-~~~i-~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~-lgl~Gp~~tv 323 (576)
|+||||+ +.++ ..++..++|||+|++.+++......+.... ......++.++....|..++++++. ||++||+++|
T Consensus 1223 L~dAGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~-~~~~v~~~~~~~~~~n~~aa~is~~~lgl~GP~~tv 1301 (1887)
T 2uv8_A 1223 FIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRF-KDEPVQNDILQESFINTMSAWVNMLLISSSGPIKTP 1301 (1887)
T ss_dssp HHHTTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTT-TTCCCCTTHHHHHSTTHHHHHHHHHTTCCCSCCCCC
T ss_pred HHHcCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHH-hcCCCCcchhhcchhhHHHHHHHHHHcCCccceEEe
Confidence 9999995 6531 126789999999999999876665443221 1133566667777889999999995 9999999999
Q ss_pred cCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhcc------CCCCCCCCCCCccCCCcceecC
Q 008146 324 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR------NNDPTKASRPWDINRDGFVMGE 397 (576)
Q Consensus 324 ~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~------~~~p~~~~rpfd~~~~G~v~gE 397 (576)
+++|+||+.||+.|++.|++|+||+|||||+|. +++..+..|..+++++.. +.+|++.|||||.+++||++||
T Consensus 1302 ~tACASsl~Al~~A~~~I~sG~advaLvGGvd~-~~~~~~~~f~~m~als~~~~e~~~g~~p~~~~RPfd~~r~Gfv~gE 1380 (1887)
T 2uv8_A 1302 VGACATSVESVDIGVETILSGKARICIVGGYDD-FQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNGFMEAQ 1380 (1887)
T ss_dssp CCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHTTCBCCHHHHHHTTCCGGGSCCTTBTTCCSBCBBC
T ss_pred ecccccHHHHHHHHHHHHHcCCCCEEEEeeecc-CChHHHHHHHHhhhhccchhhhcccCCCccCcCCCcccCCCccccc
Confidence 999999999999999999999999999999998 578888899999999842 5668899999999999999999
Q ss_pred ceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCC------------------hH------------------
Q 008146 398 GAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD------------------GV------------------ 441 (576)
Q Consensus 398 GAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~------------------~~------------------ 441 (576)
|+|++||+++++|+++|++||++|+|+++++|+.+.+.|.|. ..
T Consensus 1381 Gag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~lt~ar~~~G~gt~ps~~ld~~~r~~ql~~~~~~i~ 1460 (1887)
T 2uv8_A 1381 GAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQIK 1460 (1887)
T ss_dssp EEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCTTCCCSGGGGGGCCCCSCCSSCCGGGCHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEccHHHHHHCCCceEEEEeeeEEecCCccccCCCCCccccccccccccccCCCCcccchHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999977666553 10
Q ss_pred -------------------------HH-------------------------------HHHHHHHHHHcCCCCCCccEEE
Q 008146 442 -------------------------GV-------------------------------ILCIEKALAHSGVSREDVNYIN 465 (576)
Q Consensus 442 -------------------------~~-------------------------------~~ai~~AL~~Agl~~~dId~ve 465 (576)
.| ..+|++||+++|++++||||||
T Consensus 1461 ~~~~~~~~~l~~~~~~~g~~~~~~~~Qe~~~~i~~~~~~~~~~~~~~~~~~~~~~d~~~~air~ALa~AGl~p~DId~ve 1540 (1887)
T 2uv8_A 1461 DWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLGVAS 1540 (1887)
T ss_dssp HHHHHHHHHHHHHHTTSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTTCSSSCHHHHHHHTTTCCGGGEEEEE
T ss_pred HHhhhhhhhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHhhccchhhchHHHHHHHHHHHHcCCCHHHceEEE
Confidence 22 3799999999999999999999
Q ss_pred ecCCCCccCcHHHHHHHHHHHcC-----CCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCC-
Q 008146 466 AHATSTPAGDIKEYQALIHCFGQ-----NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD- 539 (576)
Q Consensus 466 ~Hgtgt~~gD~~E~~Al~~~f~~-----~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~- 539 (576)
+|||||++||++|.++|.++|+. ..++++++.|+++||++||||++++++++++|++|.|||++|+++|++.++
T Consensus 1541 aHGTgT~~gD~~E~~Al~~~f~~~gr~~~~pl~v~s~KsliGH~~gAAGa~~li~~ll~L~~g~iPpt~n~d~~dp~l~~ 1620 (1887)
T 2uv8_A 1541 FHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKILEQ 1620 (1887)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCGGGHHHHHHHHHHHHHTTCEECCCTTCSSBCGGGGG
T ss_pred ecCCCCcccCHHHHHHHHHHHhhhccCCCCcEEEEecccceechHHHHhHHHHHHHHHHHHhCCcCCcCCCCCCCCcccc
Confidence 99999999999999999999964 135899999999999999999999999999999999999999999999985
Q ss_pred cccc-cCCccccc-CccEEEEeccCCCcceeEEEEeeC
Q 008146 540 TNVL-VGPKKERL-EVKAALSNSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 540 ~~~~-~~~~~~~~-~~~~alv~sfG~gG~na~vil~~~ 575 (576)
++++ +..+..+| .+|++++|||||||+|+|+|++++
T Consensus 1621 ~~~l~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~p 1658 (1887)
T 2uv8_A 1621 FEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVHP 1658 (1887)
T ss_dssp CTTEECCSSCEECSCCCEEEEEEEETTTEEEEEEEECT
T ss_pred ccccccccccccCCCCCEEEEccCCCCCccEEEEEecC
Confidence 5543 23333444 589999999999999999999875
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-60 Score=596.45 Aligned_cols=394 Identities=24% Similarity=0.339 Sum_probs=338.0
Q ss_pred CHHHHHHHHHcCCCcc--eec---cCCCCC-------------CCCcccccccc-CCCCCCC-CChhhhhcCCHHHHHHH
Q 008146 181 EPDVFYNNLLEGVSGI--SEI---ETFDCT-------------SFPTKIAAEIK-SFSTDGW-VAPKLSKRMDKFMLYLL 240 (576)
Q Consensus 181 ~~~~~w~~L~~G~~~i--~~~---~~~~~~-------------~~~~~~~g~v~-~fd~~~~-i~~~~a~~mdp~~rl~l 240 (576)
+.++.|+...++.+.+ .++ ++|+.. .++.+++|+++ +||+.+| |++++++.|||+++|++
T Consensus 2573 s~~~a~~~~~~~~~~~~i~~~~~~~~W~~~~~~~~~i~~p~~~~~~~~~gG~i~d~FD~~~fgIs~rea~~mDp~~rL~l 2652 (3089)
T 3zen_D 2573 SEADARAFVQFDPEHTVARPLPDSSDWEVTRKAGTEIRVPRKTKLSRTVGAQIPTGFDPTVWGISPDMASSIDRVALWNI 2652 (3089)
T ss_dssp CHHHHHHHHTTSTTSEEEEECTTTCCEEEEECTTCEEEEEEEECCSCCEEECCCTTCCTTTTTCCHHHHHHSCHHHHHHH
T ss_pred CHHHHHHHHHhCCCcceEEeCCCCcceeeeecCCCCcCCCCcCCccceEEEEcCCCCChhhcCCCHHHHHhcCHHHHHHH
Confidence 5678888887766554 332 334331 23566788894 7999999 99999999999999999
Q ss_pred HHHHHHHHhCCCChhhhh-cccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHH-hCCCC
Q 008146 241 TAGKKALADGGITEDVMN-ELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD-LGWMG 318 (576)
Q Consensus 241 ~aa~eAL~dAGi~~~~i~-~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~-lgl~G 318 (576)
+++++||+|||+++++++ .++..++|||+|++.+++....+.+..+..+....++ .++....|..++++++. ||++|
T Consensus 2653 ~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~aa~is~~~lGl~G 2731 (3089)
T 3zen_D 2653 VATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMYHGNLLGRAKPND-ILQEVLPNVVAAHVMQSYVGGYG 2731 (3089)
T ss_dssp HHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHHHHHTTCCCCTT-HHHHTSTTHHHHHHHHHTTCCCS
T ss_pred HHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHHHHHhcCCCccch-hhccccccHHHHHHHHHHcCCCC
Confidence 999999999999997553 2478999999999999988777666555433333333 35667778899999864 69999
Q ss_pred ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhc------cCCCCCCCCCCCccCCCc
Q 008146 319 PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQ------RNNDPTKASRPWDINRDG 392 (576)
Q Consensus 319 p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~------~~~~p~~~~rpfd~~~~G 392 (576)
|+++|+++|+||++||++|+++|++|+||++||||+|. +++..+..|..+++++. .+.+|++.|||||.+++|
T Consensus 2732 Ps~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~-ls~~~~~~f~~~~als~~~~~~~~~~sp~~~crpFd~~~dG 2810 (3089)
T 3zen_D 2732 AMVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDD-LTLEAIIGFGDMAATADTEMMRAKGISDSKFSRANDRRRLG 2810 (3089)
T ss_dssp CEECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHHTCBCCHHHHHHTTCCTTTSCCSSBTTCCC
T ss_pred CceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecc-cCHHHHHHHHHhhhhhcchhhhhccCCcccccCccccCCCC
Confidence 99999999999999999999999999999999999999 78888899999888763 467799999999999999
Q ss_pred ceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCCh-------HHHHHHHHHHHHHcCCCCCCccEEE
Q 008146 393 FVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDG-------VGVILCIEKALAHSGVSREDVNYIN 465 (576)
Q Consensus 393 ~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~-------~~~~~ai~~AL~~Agl~~~dId~ve 465 (576)
|++|||+|++||+++++|+++|++||++|.++++++|+++.+.+.|+. .+|.++|+++|+++|++++||||||
T Consensus 2811 ~v~GEGAgavVL~~~e~A~~~G~~I~avI~g~~~n~Dg~~~~~~aP~~g~~~a~~~~q~~ai~~AL~~AGl~p~DIdyVE 2890 (3089)
T 3zen_D 2811 FLEAQGGGTILLARGDLALKMGLPVLAVVGYAQSFADGVHTSIPAPGLGALGAARGGRESTLARSLAQLGVGADDIAVIS 2890 (3089)
T ss_dssp BCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCCCCCSSCCCCGGGGGSTTGGGSHHHHHHHTTTCCGGGEEEEE
T ss_pred EEEeccceEEEEeeHHHHHhCCCceEEEEEEEEEecCCcccCccCCchhHHhHhhhhHHHHHHHHHHHcCCCHHHeeEEE
Confidence 999999999999999999999999999999999999999988888852 3677899999999999999999999
Q ss_pred ecCCCCccCcHHHHH---HHHHHHcCC--CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCc
Q 008146 466 AHATSTPAGDIKEYQ---ALIHCFGQN--RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDT 540 (576)
Q Consensus 466 ~Hgtgt~~gD~~E~~---Al~~~f~~~--~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~ 540 (576)
+|||||++||++|.+ ++.++|+.. .+++|+++|+++||++||||++++++++++|++++|||++|+++|++.++.
T Consensus 2891 aHGTGT~lgD~~E~~al~al~~~fg~~~~~~~~v~s~Ks~iGH~~gAAG~~~lik~ll~L~~g~iPpt~~~~~~np~i~~ 2970 (3089)
T 3zen_D 2891 KHDTSTLANDPNETELHERIADSMGRAPGNPLFIVSQKTLTGHAKGGAAVFQMMGLCQILRDGVIPPNRSLDCVDDELAT 2970 (3089)
T ss_dssp CCCCCCTTHHHHHHHHHHHHHHHTTCCTTCCEEEECSHHHHCBCSTTHHHHHHHHHHHHHHHCCBCCCTTCSSBCGGGGG
T ss_pred EecCCcccccHHHHHHHHHHHHHhCccCCCcceecccccccCCchhhhhHHHHHHHHHHHhcCccCCCCCCCCCCCCccc
Confidence 999999999999999 788899865 368999999999999999999999999999999999999999999999872
Q ss_pred --ccccCCccccc----CccEEEEeccCCCcceeEEEEeeCC
Q 008146 541 --NVLVGPKKERL----EVKAALSNSFGFGGHNSSIIFSPYK 576 (576)
Q Consensus 541 --~~~~~~~~~~~----~~~~alv~sfG~gG~na~vil~~~~ 576 (576)
++.+..+..+| .+|++++|||||||+|+|+||++|.
T Consensus 2971 ~~~~~~~~~~~~w~~~~~~r~a~vnSfGfGG~NahvVle~~~ 3012 (3089)
T 3zen_D 2971 SGHFVWVREPLDLRGKFPLKAGLVTSLGFGHVSGLVALVHPE 3012 (3089)
T ss_dssp CSSEEECSSCBCCCTTSCCCEEEEEEEETTTEEEEEEEECGG
T ss_pred cCCeeecCCCccCCCCCCCCEEEEccccCCCCeEEEEEecCc
Confidence 23333333333 4799999999999999999999873
|
| >1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=315.64 Aligned_cols=271 Identities=17% Similarity=0.225 Sum_probs=218.5
Q ss_pred HHHHHHHHHHHHHHhC-CCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHH
Q 008146 235 FMLYLLTAGKKALADG-GITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 313 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dA-Gi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~ 313 (576)
.++|+++++++||+|+ |+++++++ +|++|+..+++. ..+..+.++++.
T Consensus 30 ~~~L~~~a~~~AL~dA~gl~~~~id-------~v~~g~~~~~~~------------------------~~~~~a~~ia~~ 78 (390)
T 1wdk_C 30 AEDMSAHLISKVLERNSKVDPGEVE-------DVIWGCVNQTLE------------------------QGWNIARMASLM 78 (390)
T ss_dssp HHHHHHHHHHHHHHHCTTSCGGGEE-------EEEEECSSBSBT------------------------TTTTHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCC-------EEEEEeeccccC------------------------CCCcHHHHHHHH
Confidence 4689999999999999 99987554 799997653221 124578899999
Q ss_pred hCC--CCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccc-hhhh------------------HHHHHhhh-
Q 008146 314 LGW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PIGL------------------GGFVACRA- 371 (576)
Q Consensus 314 lgl--~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~-p~~~------------------~~~~~~~~- 371 (576)
||+ +||+++|+++|+|++.||++|+++|++|++|++||||+|.+.. |... .+....+.
T Consensus 79 lgl~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 158 (390)
T 1wdk_C 79 TQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLG 158 (390)
T ss_dssp SSSCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTBCCCGGGGGTSCGGGGSHHHHHHHHH
T ss_pred cCCCCCccEEEEcccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccccCCcccccccCccccccCCcchhHHHHHHHHHH
Confidence 999 8999999999999999999999999999999999999998643 3211 11111111
Q ss_pred ----hhcc----------------------CC--CC------CCCCCCCccC---------------------CCcce--
Q 008146 372 ----LSQR----------------------NN--DP------TKASRPWDIN---------------------RDGFV-- 394 (576)
Q Consensus 372 ----ls~~----------------------~~--~p------~~~~rpfd~~---------------------~~G~v-- 394 (576)
++.. .. .| .+.++|||.+ ++|++
T Consensus 159 ~~~g~s~e~~~~~a~~s~~~a~~a~~~g~~~~ei~p~~~~~~~~~~~~fd~d~~~r~~~t~e~~~~~~~i~~p~~G~vt~ 238 (390)
T 1wdk_C 159 KMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKIFDYDETIRPDTTLESLAALKPAFNPKGGTVTA 238 (390)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTTCCEEEECSCTTCCTTCCHHHHHTSCCSSCTTTCCCCG
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHhcCCcccceeeeeeccCCCcceeeccccccCCCCCHHHHhcCCCcccCCCCcEec
Confidence 1110 00 02 1223789988 79999
Q ss_pred -----ecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q 008146 395 -----MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHAT 469 (576)
Q Consensus 395 -----~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgt 469 (576)
++||++++||+++++|+++|++|+++|+|++.+++. |.+.+.++..+++++|+++|++++||||||+|++
T Consensus 239 ~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~-----p~~~~~~~~~a~~~al~~Agl~~~dId~ve~~d~ 313 (390)
T 1wdk_C 239 GTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVD-----PAIMGYGPVPATQKALKRAGLNMADIDFIELNEA 313 (390)
T ss_dssp GGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECC-----GGGGGGTHHHHHHHHHHHHTCCGGGCCEEEECCS
T ss_pred hhcCcccchhheeEEecHHHHHHcCCCccEEEEEEEEeccC-----hhhcchhHHHHHHHHHHHcCCChhhCcEEEeccC
Confidence 999999999999999999999999999999998753 3445677899999999999999999999999999
Q ss_pred CCccCcHHHHHHHHHHHcCC----CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccC
Q 008146 470 STPAGDIKEYQALIHCFGQN----RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVG 545 (576)
Q Consensus 470 gt~~gD~~E~~Al~~~f~~~----~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~ 545 (576)
+| .|..++.+.|+.. .++++++.|.++||++||+|+.++++++++|+++
T Consensus 314 f~-----~~~~~~~~~lg~~~~~~~~vn~~gg~~~~GHp~gasG~~~~~~~~~~L~~~---------------------- 366 (390)
T 1wdk_C 314 FA-----AQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQN---------------------- 366 (390)
T ss_dssp BH-----HHHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT----------------------
T ss_pred CH-----HHHHHHHHHcCCCCCCCCcCCCCcCcccccCCcchhHHHHHHHHHHHHhhc----------------------
Confidence 88 4667777888753 3578999999999999999999999999999984
Q ss_pred CcccccCccEEEEeccCCCcceeEEEEee
Q 008146 546 PKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 546 ~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
..++++++..+.||.+..+||+.
T Consensus 367 ------~~~~gl~~~~~ggG~~~a~~~~~ 389 (390)
T 1wdk_C 367 ------GGTFGLSTMCIGLGQGIATVFER 389 (390)
T ss_dssp ------TCSEEEEEEEETTTEEEEEEEEC
T ss_pred ------CCCEEEEEecccchheEEEEEEe
Confidence 13567777777889999999986
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-35 Score=309.96 Aligned_cols=269 Identities=19% Similarity=0.251 Sum_probs=217.0
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
++|+++++++||+|||+++++++ +|++|+..+++. ....+.++++.+|
T Consensus 31 ~~L~~~a~~~Al~dAGl~~~~id-------~v~~g~~~~~~~-------------------------~~~~a~~ia~~lg 78 (397)
T 1wl4_A 31 QDLGSTVIKEVLKRATVAPEDVS-------EVIFGHVLAAGC-------------------------GQNPVRQASVGAG 78 (397)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSCCTTS-------------------------CSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCCCCC-------------------------CCHHHHHHHHHcC
Confidence 67999999999999999987554 688887653211 2357889999999
Q ss_pred C--CCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccc-hhh--------------hHH---------H--H
Q 008146 316 W--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PIG--------------LGG---------F--V 367 (576)
Q Consensus 316 l--~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~-p~~--------------~~~---------~--~ 367 (576)
+ +||+++|+++|+|++.||++|+++|++|++|++||||+|.+.. |.. +.. | .
T Consensus 79 l~~~~p~~~v~~aCaSg~~Ai~~A~~~I~~G~~d~vlagG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 158 (397)
T 1wl4_A 79 IPYSVPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNC 158 (397)
T ss_dssp CCTTSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESTTCCEECCCSSCCSSSCCCCEEHHHHHTTBCTTTCC
T ss_pred CCCCccEEEecCcChhHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccccccCcccccchhccccccCccccc
Confidence 9 8999999999999999999999999999999999999998753 211 000 0 1
Q ss_pred Hhhhhhc-----cC-------------------------------------------CCCCC------------CCCC-C
Q 008146 368 ACRALSQ-----RN-------------------------------------------NDPTK------------ASRP-W 386 (576)
Q Consensus 368 ~~~~ls~-----~~-------------------------------------------~~p~~------------~~rp-f 386 (576)
.++.+++ .+ .+++. .||| |
T Consensus 159 ~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvf 238 (397)
T 1wl4_A 159 HMGITAENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGLIEVKTDEFPRHGSNIEAMSKLKPYF 238 (397)
T ss_dssp BHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHHTSCCSS
T ss_pred hHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCcccceeeeeeccCCCceeeccccccCCCCCHHHHhcCCCcc
Confidence 1222210 00 00222 5899 9
Q ss_pred ccCCCcce-------ecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 008146 387 DINRDGFV-------MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRE 459 (576)
Q Consensus 387 d~~~~G~v-------~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~ 459 (576)
|.+++|++ ++||++++||+++++|+++|++|+++|+|++.+++ .|.+.+.++..+++++|+++|++++
T Consensus 239 d~~~~G~vt~~~~s~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~a~~~al~~Agl~~~ 313 (397)
T 1wl4_A 239 LTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGV-----EPSIMGIGPIPAIKQAVTKAGWSLE 313 (397)
T ss_dssp CCSSCCCCCTTSBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGG
T ss_pred CCCCCCCEechhcCCccchhheeeEecHHHHHHcCCCccEEEEEEEEeec-----ChhhccchHHHHHHHHHHHcCCCHH
Confidence 99999999 99999999999999999999999999999999874 3445567889999999999999999
Q ss_pred CccEEEecCCCCccCcHHHHHHHHHHHcCC-CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCC
Q 008146 460 DVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVV 538 (576)
Q Consensus 460 dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~ 538 (576)
||||||+|+..+ ....++.+.|+.. .++++++.|.++||++||+|+.++++++++|+++
T Consensus 314 dId~ie~~d~f~-----~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~--------------- 373 (397)
T 1wl4_A 314 DVDIFEINEAFA-----AVSAAIVKELGLNPEKVNIEGGAIALGHPLGASGCRILVTLLHTLERM--------------- 373 (397)
T ss_dssp GCCEEEECCSBH-----HHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH---------------
T ss_pred HCCEEEEecccH-----HHHHHHHHHcCCCCcCcCCCcCccccCCChhhhHHHHHHHHHHHHhhc---------------
Confidence 999999876554 2334577888854 3688999999999999999999999999999983
Q ss_pred CcccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 539 DTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 539 ~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
..++++++..+.||.+..+||+.
T Consensus 374 -------------~~~~gl~~~~~ggG~~~a~~~e~ 396 (397)
T 1wl4_A 374 -------------GRSRGVAALCIGGGMGIAMCVQR 396 (397)
T ss_dssp -------------TCCEEEEEEEETTTEEEEEEEEE
T ss_pred -------------CCCEEEEEEecccchheEEEEEe
Confidence 23678888778889999999986
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-35 Score=310.24 Aligned_cols=270 Identities=21% Similarity=0.268 Sum_probs=215.2
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
..+|+++++++||+|+|+++++++ +|++|+..+++. ..+..+.++++.+
T Consensus 26 ~~~L~~~Aa~~Al~dAgl~~~~id-------~v~~g~~~~~~~------------------------~~~~~a~~va~~l 74 (401)
T 1ulq_A 26 PDDLLAHALSVLVDRSGVPKEEVE-------DVYAGCANQAGE------------------------DNRNVARMALLLA 74 (401)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSCCSST------------------------TTTTHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccCCC------------------------CCChHHHHHHHHh
Confidence 357999999999999999987554 799997653211 1245688999999
Q ss_pred CC--CCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccc-hhh--------------h----------HHHH
Q 008146 315 GW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PIG--------------L----------GGFV 367 (576)
Q Consensus 315 gl--~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~-p~~--------------~----------~~~~ 367 (576)
|+ ++|+++|+++|+|++.||++|+++|++|++|++||+|+|.+.. |.. + .++.
T Consensus 75 Gl~~~~p~~~v~~aCas~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 154 (401)
T 1ulq_A 75 GFPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKM 154 (401)
T ss_dssp TCCTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHH
T ss_pred CCCCCccEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccccccccccCcccccchhhhcccccccc
Confidence 99 7899999999999999999999999999999999999998654 320 0 1221
Q ss_pred -H------hhhh---------------------hcc-----------C----------------CCCCC-----------
Q 008146 368 -A------CRAL---------------------SQR-----------N----------------NDPTK----------- 381 (576)
Q Consensus 368 -~------~~~l---------------------s~~-----------~----------------~~p~~----------- 381 (576)
. ++.. +.. . .++++
T Consensus 155 p~~~~~~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~P~~~~~~~~~~~~~~d~~~r~~~t~e~~ 234 (401)
T 1ulq_A 155 QALYGTESMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEEILVEQDEGPRRDTSLEKL 234 (401)
T ss_dssp HHHSCCCCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHH
T ss_pred ccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeceeecCCCCceeeccccccCCCCCHHHH
Confidence 0 1110 000 0 01122
Q ss_pred -CCCC-CccCCCcce-------ecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHH
Q 008146 382 -ASRP-WDINRDGFV-------MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALA 452 (576)
Q Consensus 382 -~~rp-fd~~~~G~v-------~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~ 452 (576)
.+|| ||. +|++ ++||+++|||+++++|+++|++|+++|+|++.+++.. .+.+.++..+++++|+
T Consensus 235 ~~~rpif~~--~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p-----~~~~~~~~~a~~~al~ 307 (401)
T 1ulq_A 235 AALRPVFRE--GGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVPP-----RIMGIGPVPATRKALE 307 (401)
T ss_dssp HHSCBSSST--TCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCG-----GGGGGTHHHHHHHHHH
T ss_pred hhCCCccCC--CCCeechhcCCccchheEEEEecHHHHHHcCCCceEEEEEEEEecCCc-----cccchhHHHHHHHHHH
Confidence 3466 764 6887 7999999999999999999999999999999998743 2335677899999999
Q ss_pred HcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcC---CCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCC
Q 008146 453 HSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQ---NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNI 529 (576)
Q Consensus 453 ~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~---~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~ 529 (576)
++|++++||||||+|++++. .|+..++. |+- ..++++++.|..+||++||+|+.++++++++|+++
T Consensus 308 ~Agl~~~dId~ie~heafa~----~~l~~~~~-lg~~~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~------ 376 (401)
T 1ulq_A 308 RAGLSFSDLGLIELNEAFAA----QALAVLRE-WSLSMEDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRR------ 376 (401)
T ss_dssp HTTCCGGGCSEEEECCSBHH----HHHHHHHH-HTCCTTCTTBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT------
T ss_pred HcCCCHHHcCEEEEecchHH----HHHHHHHH-cCCCCCCCccCCCCcccccCCCcchHHHHHHHHHHHHHhhc------
Confidence 99999999999999999885 56666644 553 34678888888999999999999999999999985
Q ss_pred CCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEeeC
Q 008146 530 NLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 530 ~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~~ 575 (576)
..++++++++++||+|.++||+++
T Consensus 377 ----------------------~~~~gl~~~~~ggG~~~a~v~~~~ 400 (401)
T 1ulq_A 377 ----------------------KVQFGLATMCIGVGQGIAVVVEGM 400 (401)
T ss_dssp ----------------------TCSEEEEEEEETTTEEEEEEEEEC
T ss_pred ----------------------CCCEEEEEeecCCcccEEEEEEeC
Confidence 247899999999999999999975
|
| >2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-34 Score=306.36 Aligned_cols=272 Identities=16% Similarity=0.232 Sum_probs=212.8
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
..+|+++++++||+|||+++++++ +|++|+..+++. ..+..+.++++.+
T Consensus 55 ~~~La~~Aa~~AL~dAGl~~~~Id-------~vi~g~~~~~~~------------------------~~~~~a~~va~~l 103 (442)
T 2wu9_A 55 PDDLLAPVLRALIEKTNLNPSEVG-------DIVVGTVLAPGS------------------------QRASECRMAAFYA 103 (442)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-------CEEEECCSSBHH------------------------HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeecCccC------------------------CCChHHHHHHHHc
Confidence 357999999999999999987554 699998754321 0134578999999
Q ss_pred CC--CCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhh----------hH-HHH-----Hh-------
Q 008146 315 GW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG----------LG-GFV-----AC------- 369 (576)
Q Consensus 315 gl--~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~----------~~-~~~-----~~------- 369 (576)
|+ ++|+++|+++|+|++.||++|+++|++|++|++||+|+|.+..... +. .+. .+
T Consensus 104 Gl~~~~p~~~v~~aCaSg~~Al~~A~~~I~sG~~d~vLvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~mg~~A~~~ 183 (442)
T 2wu9_A 104 GFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQNCLLPMGVTSENV 183 (442)
T ss_dssp TCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCCCCCSCCCGGGGGCHHHHHTTSCHHHHHHHH
T ss_pred CCCCCceEEEeCCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccchhhhhccccccchhHHHHHHHHH
Confidence 99 7899999999999999999999999999999999999998654110 00 110 00
Q ss_pred ----------------------------hhhhccC-------------------CCCCC------------CCCC-CccC
Q 008146 370 ----------------------------RALSQRN-------------------NDPTK------------ASRP-WDIN 389 (576)
Q Consensus 370 ----------------------------~~ls~~~-------------------~~p~~------------~~rp-fd~~ 389 (576)
+.+.... .+.++ .+|| ||.
T Consensus 184 ~~~~gisre~~~~~A~~s~~~A~~~p~ag~~~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~t~e~~~~~rpvfd~- 262 (442)
T 2wu9_A 184 AQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKK- 262 (442)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEECTTTCCEEEEEECSCTTCCTTCCHHHHHTSCCSSCT-
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHhChhcccccccccceeeccccccccccCceeeecccCcCCCCCHHHHhcCCCccCC-
Confidence 1111100 00111 3456 764
Q ss_pred CCcce-------ecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcc
Q 008146 390 RDGFV-------MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVN 462 (576)
Q Consensus 390 ~~G~v-------~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId 462 (576)
+|++ ++||+++|||++++.|+++|++|+++|+|++.+++. |.+.+.++..+++++|+++|++++|||
T Consensus 263 -~G~vt~~n~s~~~DGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~-----p~~~~~~~~~A~~~Al~~AGl~~~DId 336 (442)
T 2wu9_A 263 -DGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVD-----PAIMGIGPAVAIPAAVKAAGLELDDID 336 (442)
T ss_dssp -TCCCCGGGBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECC-----GGGGGGHHHHHHHHHHHHTTCCGGGCC
T ss_pred -CCCeechhcCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEecCC-----chhcchHHHHHHHHHHHHcCCCHHHCC
Confidence 6887 699999999999999999999999999999998773 333466888999999999999999999
Q ss_pred EEEecCCCCccCcHHHHHHHHHHHcCC-CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcc
Q 008146 463 YINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTN 541 (576)
Q Consensus 463 ~ve~Hgtgt~~gD~~E~~Al~~~f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~ 541 (576)
|||+|+++|. .|+.+++ .|+-. .++++.+.+..+||++||+|+.++++++++|+++. |
T Consensus 337 ~iE~h~aft~----~~l~~~~-~lG~~~~~vN~~GG~~a~GHp~GAsG~~~~~~~v~~Lr~~~--~-------------- 395 (442)
T 2wu9_A 337 LFEINEAFAS----QFVYCRN-KLGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRG--K-------------- 395 (442)
T ss_dssp EEEECCSBHH----HHHHHHH-HHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHC--T--------------
T ss_pred EEEEeCCChH----HHHHHHH-HhCCCCCCcCCCccHhhcCCchhHHHHHHHHHHHHHHhccC--C--------------
Confidence 9999999996 5777774 46643 35677777778999999999999999999999853 0
Q ss_pred cccCCcccccCccEEEE-eccCCCcceeEEEEeeCC
Q 008146 542 VLVGPKKERLEVKAALS-NSFGFGGHNSSIIFSPYK 576 (576)
Q Consensus 542 ~~~~~~~~~~~~~~alv-~sfG~gG~na~vil~~~~ 576 (576)
..+++++ +++| ||.|+++||++++
T Consensus 396 ----------~~~~glas~~~G-GG~~~a~v~~~~~ 420 (442)
T 2wu9_A 396 ----------DCRFGVVSMCIG-TGMGAAAVFERGD 420 (442)
T ss_dssp ----------TCCEEEEEEEET-TTEEEEEEEEECS
T ss_pred ----------CCCEEEEEeecc-cchheEEEEEecc
Confidence 2467774 6788 9999999999864
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-34 Score=302.83 Aligned_cols=268 Identities=21% Similarity=0.277 Sum_probs=211.0
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
.++|+++++++||+|+|+++++++ ++++|+..+.. .....+.++++.+
T Consensus 27 ~~~L~~~a~~~Al~dAgl~~~~id-------~~~~g~~~~~~-------------------------~~~~~a~~ia~~l 74 (392)
T 2vu1_A 27 AHELGATVISAVLERAGVAAGEVN-------EVILGQVLPAG-------------------------EGQNPARQAAMKA 74 (392)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSCCTT-------------------------SCSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCCCC-------------------------CCcHHHHHHHHHc
Confidence 467999999999999999987554 67777654211 1235688999999
Q ss_pred CCC--CccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccc-hhh--------------hHHH-----------
Q 008146 315 GWM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PIG--------------LGGF----------- 366 (576)
Q Consensus 315 gl~--Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~-p~~--------------~~~~----------- 366 (576)
|++ ||+++|+++|+|++.||++|+++|++|++|++||||+|.+.. |.. +..+
T Consensus 75 gl~~~~p~~~v~~aCaSgl~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (392)
T 2vu1_A 75 GVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYG 154 (392)
T ss_dssp TCCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEEECCTTCCCSSCEEEEEHHHHHHTBCTTTC
T ss_pred CCCCCceEEEecccchHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCccccccccccccCcccccchhhhccccccccc
Confidence 998 999999999999999999999999999999999999998643 220 0000
Q ss_pred HHhhhhh-----ccCCC-----------------------------C-----CCCCCCCccC------------------
Q 008146 367 VACRALS-----QRNND-----------------------------P-----TKASRPWDIN------------------ 389 (576)
Q Consensus 367 ~~~~~ls-----~~~~~-----------------------------p-----~~~~rpfd~~------------------ 389 (576)
..++.++ +.+.. | .+.|+|||.+
T Consensus 155 ~~~~~~a~~~~~~~g~s~e~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~f~~d~~~r~~~t~e~~~~~~~v 234 (392)
T 2vu1_A 155 YHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPA 234 (392)
T ss_dssp CBHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCTTCCEEECSCSSCCTTCCHHHHHTCCCS
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeeeeeeccCCCceeeccccccCCCCCHHHHhcCCCc
Confidence 0112221 00000 1 0126889887
Q ss_pred --CCcce-------ecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 008146 390 --RDGFV-------MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 460 (576)
Q Consensus 390 --~~G~v-------~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~d 460 (576)
++|++ ++||++++||+++++|+++|++|+++|+|++.+++ .|.+.+.++..+++++|+++|++++|
T Consensus 235 ~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~a~~~al~~agl~~~d 309 (392)
T 2vu1_A 235 FDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGV-----DPKVMGTGPIPASRKALERAGWKIGD 309 (392)
T ss_dssp SCTTCCCCSSSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGGG
T ss_pred cCCCCCeeCcccCCccChhheeeEecHHHHHhcCCCccEEEEEEEEeec-----ChhhcchhHHHHHHHHHHHcCCCHHH
Confidence 78999 99999999999999999999999999999999864 23445677899999999999999999
Q ss_pred ccEEEecCCCCccCcHHHHHH--HHHHHcCC-CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCC
Q 008146 461 VNYINAHATSTPAGDIKEYQA--LIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAV 537 (576)
Q Consensus 461 Id~ve~Hgtgt~~gD~~E~~A--l~~~f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~ 537 (576)
|||||+|+ ..|..+ +.+.|+.. .++++++.|.++||++||+|+.++++++++|+++
T Consensus 310 Id~ie~~d-------~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~-------------- 368 (392)
T 2vu1_A 310 LDLVEANE-------AFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRR-------------- 368 (392)
T ss_dssp CSEEEECC-------SBHHHHHHHHHHHCCCGGGBSTTCCHHHHCCCGGGHHHHHHHHHHHHHHHH--------------
T ss_pred cCEEEecc-------ccHHHHHHHHHHcCCCcccCCCCccHhhhCCChhhHHHHHHHHHHHHHhcc--------------
Confidence 99999884 444455 46778754 4688999999999999999999999999999983
Q ss_pred CCcccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 538 VDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
..++++++..+-||.+.++||+.
T Consensus 369 --------------~~~~gl~~~~~ggG~~~a~~~e~ 391 (392)
T 2vu1_A 369 --------------GARKGLATLCIGGGMGVAMCIES 391 (392)
T ss_dssp --------------TCSEEEEEEEETTTEEEEEEEEC
T ss_pred --------------CCCEEEEEEecccchheEEEEEe
Confidence 13567766544489999999986
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-32 Score=294.47 Aligned_cols=270 Identities=16% Similarity=0.216 Sum_probs=213.7
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
..+|+++++++||+|||+++++++ +|++|+..+++. .+..+..+++.+
T Consensus 55 ~~~L~~~Aa~~AL~dAgl~~~~id-------~v~~g~~~~~~~-------------------------~~~~a~~~a~~l 102 (418)
T 2iik_A 55 PDELLSAVMTAVLKDVNLRPEQLG-------DICVGNVLQPGA-------------------------GAIMARIAQFLS 102 (418)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-------CEEEECSSSBGG-------------------------GHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCCccc-------------------------cccHHHHHHHHc
Confidence 478999999999999999987555 699998654321 133566778889
Q ss_pred CC--CCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhh---------h------------HHHHH---
Q 008146 315 GW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG---------L------------GGFVA--- 368 (576)
Q Consensus 315 gl--~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~---------~------------~~~~~--- 368 (576)
|+ ++|+++|+++|+|++.||+.|+++|++|++|++||+|+|.+..... + .++..
T Consensus 103 Gl~~~~p~~~v~~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~ 182 (418)
T 2iik_A 103 DIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPGNITSRLMEKEKARDCLIPMGITSENV 182 (418)
T ss_dssp TCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTCC-----CCCTTGGGCHHHHGGGSCHHHHHHHH
T ss_pred CCCCCceEEEeCCCCHHHHHHHHHHHHHHHCCCCCEEEEeccccCccCCccCCcccchhhhcccccccccccHHHHHHHH
Confidence 99 7899999999999999999999999999999999999998754210 0 11100
Q ss_pred ---------------------------hhhhhcc------------------CCCCCCCCCC-------------CccCC
Q 008146 369 ---------------------------CRALSQR------------------NNDPTKASRP-------------WDINR 390 (576)
Q Consensus 369 ---------------------------~~~ls~~------------------~~~p~~~~rp-------------fd~~~ 390 (576)
.+.+... ..++++.||| ||.++
T Consensus 183 a~~~gitre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~~~~~d~~~rp~~t~e~l~~~~~vfd~~~ 262 (418)
T 2iik_A 183 AERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDKGTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDG 262 (418)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEEEECTTSCEEEEEECSCTTCCTTCCHHHHHHCCCSSSTTC
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHhChhcCccccceeeeeeccccccCcccceeeecccCcCCCCCHHHHhhCCCcccCCC
Confidence 0111110 0123668898 99876
Q ss_pred -----CcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEE
Q 008146 391 -----DGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYIN 465 (576)
Q Consensus 391 -----~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve 465 (576)
||++++||++++||++++.|+++|.+|+++|+|++.+.+ .|.+.+.++..+++++|+++|++++||||||
T Consensus 263 ~~t~~d~~~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~a~~~al~~Agl~~~dId~vE 337 (418)
T 2iik_A 263 STTAGNSSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGV-----PPDIMGIGPAYAIPVALQKAGLTVSDVDIFE 337 (418)
T ss_dssp CCCSTTBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEEC-----CGGGGGGHHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred ceeeccccCCCCCceEEEEecHHHHHhcCCCceEEEEEEEeccC-----CchhcchhHHHHHHHHHHHcCCCHHHCCeee
Confidence 999999999999999999999999999999999998753 2344466888999999999999999999999
Q ss_pred ecCCCCccCcHHHHHHHHHHHcCCCCccccccc--ccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccc
Q 008146 466 AHATSTPAGDIKEYQALIHCFGQNRGLRVNSTK--SMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVL 543 (576)
Q Consensus 466 ~Hgtgt~~gD~~E~~Al~~~f~~~~~~~v~s~K--~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~ 543 (576)
+|++++ .+|..|.++|.- . +.+++..+ .++||++||+|+.++++++++|+++
T Consensus 338 ~h~af~-~~~~~~~~~lg~----~-~~~vN~~GG~~a~GHp~GAsG~~~~~~~~~~L~~~-------------------- 391 (418)
T 2iik_A 338 INEAFA-SQAAYCVEKLRL----P-PEKVNPLGGAVALGHPLGCTGARQVITLLNELKRR-------------------- 391 (418)
T ss_dssp ECCSBH-HHHHHHHHHHTC----C-GGGBCTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH--------------------
T ss_pred eeccch-HHHHHHHHHcCC----C-ccccCCCCCeeeecCChhhhHHHHHHHHHHHHHhc--------------------
Confidence 998665 688888888742 1 23566666 5789999999999999999999871
Q ss_pred cCCcccccCcc-EEEEeccCCCcceeEEEEeeC
Q 008146 544 VGPKKERLEVK-AALSNSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 544 ~~~~~~~~~~~-~alv~sfG~gG~na~vil~~~ 575 (576)
..+ +++++..+.||....+||+.+
T Consensus 392 --------~~~~~gl~~~c~ggG~g~a~~~e~~ 416 (418)
T 2iik_A 392 --------GKRAYGVVSMCIGTGMGAAAVFEYP 416 (418)
T ss_dssp --------TSCEEEEEEEEETTTEEEEEEEEEC
T ss_pred --------CCCeeeEEEEeeccchhheEEEecc
Confidence 113 677777788899999999975
|
| >1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-32 Score=289.81 Aligned_cols=245 Identities=16% Similarity=0.215 Sum_probs=191.7
Q ss_pred HHHHHHHHHHHHHHhCC----CChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHH
Q 008146 235 FMLYLLTAGKKALADGG----ITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAML 310 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAG----i~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~i 310 (576)
..+|+++++++||+|+| +++++++ +|++|+..+++ ..+..+.++
T Consensus 35 ~~~La~~Aa~~Al~~Ag~~~~l~~~~id-------~v~~g~~~~~~-------------------------~~~~~a~~v 82 (393)
T 1afw_A 35 TDYLLYNFLNEFIGRFPEPLRADLNLIE-------EVACGNVLNVG-------------------------AGATEHRAA 82 (393)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHTCGGGCC-------CEEEECSSSBG-------------------------GGHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCHHHCC-------EEEEEecCCCC-------------------------CCChHHHHH
Confidence 35799999999999999 9987554 68999765332 124568899
Q ss_pred HHHhCC--CCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccc-hhh-----------h--HHH-----HHh
Q 008146 311 AMDLGW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI-PIG-----------L--GGF-----VAC 369 (576)
Q Consensus 311 a~~lgl--~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~-p~~-----------~--~~~-----~~~ 369 (576)
++.+|+ ++|+++|+++|+|++.||++|+++|++|++|++||+|+|.+.. |.. + .++ ..+
T Consensus 83 a~~lGl~~~~p~~~v~~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~ 162 (393)
T 1afw_A 83 CLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQKNREAKKCLIPM 162 (393)
T ss_dssp HHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTTCSCCCHHHHHCTTGGGGGSCH
T ss_pred HHHcCCCCCceEEEEcCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEecCCCcccccccccccchhhhhcccccccchhH
Confidence 999999 7999999999999999999999999999999999999997643 210 0 000 011
Q ss_pred hhhh-----ccC----------------------------------------CCCCCC------------CCC-CccCCC
Q 008146 370 RALS-----QRN----------------------------------------NDPTKA------------SRP-WDINRD 391 (576)
Q Consensus 370 ~~ls-----~~~----------------------------------------~~p~~~------------~rp-fd~~~~ 391 (576)
+.++ +.+ .++++. +|| ||.++
T Consensus 163 ~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~f~~ei~P~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvf~~~~- 241 (393)
T 1afw_A 163 GITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPDGSICQSDEGPRPNVTAESLSSIRPAFIKDR- 241 (393)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTTSCEECSCSSCCSCCCHHHHHHCCBSCC----
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCccceeeeeeccCCceeccccccCCCCCHHHHhcCCCcccCCC-
Confidence 1110 000 112333 456 87654
Q ss_pred cce-------ecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEE
Q 008146 392 GFV-------MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYI 464 (576)
Q Consensus 392 G~v-------~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~v 464 (576)
|++ ++||++++||+++++|+++|++|+++|+|++.+++. |.+.+.++..+++++|+++|++++|||||
T Consensus 242 G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~a~~~al~~Agl~~~dId~v 316 (393)
T 1afw_A 242 GTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVP-----PEIMGVGPAYAIPKVLEATGLQVQDIDIF 316 (393)
T ss_dssp CCCBTTTBCCBEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECC-----GGGGGGHHHHHHHHHHHHHTCCGGGCSEE
T ss_pred CCeechhcCcccchhheeeEecHHHHHHcCCCccEEEEEEEEeccC-----hhhcchhHHHHHHHHHHHcCCCHHHCCEE
Confidence 776 799999999999999999999999999999999873 33445688999999999999999999999
Q ss_pred EecCCCCccCcHHHHHHHHHHHcCC-CCcccccccccccccccchhHHHHHHHHHHHHc
Q 008146 465 NAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRT 522 (576)
Q Consensus 465 e~Hgtgt~~gD~~E~~Al~~~f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~ 522 (576)
|+|+++|. .|+..++ .|+-. .++++++.+..+||++||+|+.++++++++|++
T Consensus 317 e~h~~ft~----~~l~~~~-~lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~ 370 (393)
T 1afw_A 317 EINEAFAA----QALYCIH-KLGIDLNKVNPRGGAIALGHPLGCTGARQVATILRELKK 370 (393)
T ss_dssp EECCSBHH----HHHHHHH-HHTCCGGGBSTTCCHHHHCBCTTTHHHHHHHHHHHHSCT
T ss_pred EEeccCHH----HHHHHHH-HhCCCCcCcCCCCChhhcCCchhhHHHHHHHHHHHHHhh
Confidence 99999995 5666654 46643 357777888889999999999999999999987
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-32 Score=288.12 Aligned_cols=270 Identities=21% Similarity=0.313 Sum_probs=216.3
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
...|+++++++||+|+|+++++|+ +|++|+.... ......+.+++..+
T Consensus 31 ~~~L~~~A~~~AL~~agl~~~dId-------~vi~g~~~~~-------------------------~~~~~~a~~v~~~l 78 (396)
T 4dd5_A 31 AVELGVTAAKEAIKRANITPDMID-------ESLLGGVLTA-------------------------GLGQNIARQIALGA 78 (396)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCC-------EEEEECSCCT-------------------------TSCSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeecCC-------------------------CCCchHHHHHHHHc
Confidence 357999999999999999998776 7899876421 12235688999999
Q ss_pred CC--CCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhh-----------------------------
Q 008146 315 GW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGL----------------------------- 363 (576)
Q Consensus 315 gl--~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~----------------------------- 363 (576)
|+ .+|+++|+++|+|++.||+.|+++|++|++|.+||+|+|.+......
T Consensus 79 Gl~~~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (396)
T 4dd5_A 79 GIPVEKPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFN 158 (396)
T ss_dssp TCCTTSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEESTTCCEECTTTTTCCCSSCCCCEEHHHHHTSEETTT
T ss_pred CCCCCceEEEeccccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccCCcccccccccccccCcccccchhhhcccccccc
Confidence 99 58999999999999999999999999999999999999987642110
Q ss_pred ---HHHH----------------------Hh--------hhhhcc-------------CCCCCCCCCC------------
Q 008146 364 ---GGFV----------------------AC--------RALSQR-------------NNDPTKASRP------------ 385 (576)
Q Consensus 364 ---~~~~----------------------~~--------~~ls~~-------------~~~p~~~~rp------------ 385 (576)
.++. .. +.+... ..+++...|+
T Consensus 159 ~~~~~~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~~ 238 (396)
T 4dd5_A 159 NYHMGITAENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRKGDTVVDKDEYIKPGTTMEKLAKLRP 238 (396)
T ss_dssp TEEHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEC----CEEECSCSCCCTTCCHHHHHHCCB
T ss_pred cchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCcccceeeeeeccCCCceeecCcccccCCCCHHHHhhCCC
Confidence 0000 00 000000 0123344442
Q ss_pred -Ccc-----CCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 008146 386 -WDI-----NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRE 459 (576)
Q Consensus 386 -fd~-----~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~ 459 (576)
|+. ..|+..++||++++||++++.|+++|++|+++|+|++.+++ .|.+.+.++..+++++|+++|++++
T Consensus 239 v~~p~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~I~g~~~~~~-----~p~~~~~~~~~a~~~al~~Agl~~~ 313 (396)
T 4dd5_A 239 AFKKDGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGV-----DPKIMGYGPVPATKKALEAANMTIE 313 (396)
T ss_dssp SSSTTCSCBTTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGG
T ss_pred ccCCCCCeecCCCCCcCcceeEEEEeeHHHHHHCCCCceEEEEEEEEecC-----CCCcccHHHHHHHHHHHHHcCCCHH
Confidence 432 25677789999999999999999999999999999999875 3455566789999999999999999
Q ss_pred CccEEEecCCCCccCcHHHHHHHHHHHcCC-CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCC
Q 008146 460 DVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVV 538 (576)
Q Consensus 460 dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~ 538 (576)
||||||+|++++ +|..++.+.|+.. .++++++.|.++||++||+|+.++++++++|+++
T Consensus 314 dId~ve~~d~f~-----~~~~~~~~~lg~~~~~~n~~gg~~~~GH~~gasG~~~~~~~~~~L~~~--------------- 373 (396)
T 4dd5_A 314 DIDLVEANEAFA-----AQSVAVIRDLNIDMNKVNVNGGAIAIGHPIGCSGARILTTLLYEMKRR--------------- 373 (396)
T ss_dssp GCSEEEECCSBH-----HHHHHHHHHHTCCTTSBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH---------------
T ss_pred HcCEEEecChHH-----HHHHHHHHHhCCCCCccCCCCchhhccCcHHHHHHHHHHHHHHHHHhc---------------
Confidence 999999998765 6788888888854 4688999999999999999999999999999973
Q ss_pred CcccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 539 DTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 539 ~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
..++++++..+.||...++|||+
T Consensus 374 -------------~~~~gl~~~c~ggG~g~a~~~e~ 396 (396)
T 4dd5_A 374 -------------DAKTGLATLCIGGGMGTTLIVKR 396 (396)
T ss_dssp -------------TCSEEEEEEEETTTEEEEEEEEC
T ss_pred -------------CCCeEEEEEcccCCceeEEEEeC
Confidence 24678999999999999999984
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-32 Score=286.37 Aligned_cols=270 Identities=20% Similarity=0.301 Sum_probs=216.5
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
...|+++++++||+|+|+++++|+ +|++|+..... .....+.+++..+
T Consensus 29 ~~~L~~~A~~~Al~~agl~~~~Id-------~v~~g~~~~~~-------------------------~~~~~a~~i~~~l 76 (394)
T 3ss6_A 29 PVELAVPVLQEAVKRGGVEPHEVD-------EVILGHCIQRT-------------------------DEANTARTAALAA 76 (394)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCC-------EEEEECSSCCG-------------------------GGCSHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHhHCC-------EEEEEEccCCC-------------------------ccchHHHHHHHHc
Confidence 457999999999999999998776 78998764221 1234678899999
Q ss_pred CC--CCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhh-----------------------------
Q 008146 315 GW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGL----------------------------- 363 (576)
Q Consensus 315 gl--~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~----------------------------- 363 (576)
|+ ++|+++|+++|+|++.||+.|+++|++|++|++||+|+|.+......
T Consensus 77 Gl~~~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (394)
T 3ss6_A 77 GFPDTVTGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSSSPYALKQHRWGQRLQHGEIRDTVWEVLEDPIHH 156 (394)
T ss_dssp TCCTTCEEEEEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEECTTCCEEESSTTTCCCSSCCCCEEHHHHHTBCTTTC
T ss_pred CCCCCceEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEhhccCCcccccccccccccCCccccccccccccccccc
Confidence 99 58999999999999999999999999999999999999987642210
Q ss_pred --HHHHH----------------------hh--------hhhcc-------------CCCCCCCCCC-------------
Q 008146 364 --GGFVA----------------------CR--------ALSQR-------------NNDPTKASRP------------- 385 (576)
Q Consensus 364 --~~~~~----------------------~~--------~ls~~-------------~~~p~~~~rp------------- 385 (576)
.+... .. .+... ..+|++.+|+
T Consensus 157 ~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~d~~~R~~~t~e~~~~~~pv 236 (394)
T 3ss6_A 157 IMMGETAENLVEQYEITREEQDEVALRSHTLALKAIESGYFDDQIVPITIKERRKEVVFSKDEHPRADITAEKLAGLKPA 236 (394)
T ss_dssp CBHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECSSCEEEECSCCCCCTTCCHHHHHTCCBS
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeEeEEeccCCCceeecccccccCCCCHHHHhhCCCc
Confidence 00000 00 00000 1235566664
Q ss_pred Ccc-----CCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 008146 386 WDI-----NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRED 460 (576)
Q Consensus 386 fd~-----~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~d 460 (576)
|+. ..|+..++||++++||+++++|+++|++|+++|+|++.++. .|.+.+.++..+++++|+++|++++|
T Consensus 237 f~~~g~~t~~~~~~~~dGaaavvL~~~~~A~~~g~~~~a~I~g~~~~~~-----~p~~~~~~~~~a~~~al~~agl~~~d 311 (394)
T 3ss6_A 237 FRKDGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGV-----DPKIMGIGPAPAIRKGLEKVDWSLED 311 (394)
T ss_dssp SSTTCCCBSTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGGG
T ss_pred cCCCCceecCccCCcccceeEEEeccHHHHHHCCCCceEEEEEEEEecC-----CCccchHHHHHHHHHHHHHcCCCHHH
Confidence 653 26777899999999999999999999999999999999863 34455667899999999999999999
Q ss_pred ccEEEecCCCCccCcHHHHHHHHHHHcCC-CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCC
Q 008146 461 VNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVD 539 (576)
Q Consensus 461 Id~ve~Hgtgt~~gD~~E~~Al~~~f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~ 539 (576)
|||||+|+.++ .|..++.+.|+-. .++++++.|.++||++||+|+.++++++++|+++
T Consensus 312 Id~ve~~d~fa-----~~~~~~~~~lg~~~~~v~~~gg~~~~GH~~gasG~~~~~~~~~~L~~~---------------- 370 (394)
T 3ss6_A 312 ADLLEINEAFA-----AQYLAVEKELDLDREKVNVNGSGVGLGHPIGCTGARITVSLIHELKRR---------------- 370 (394)
T ss_dssp CSEEEECCSBH-----HHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH----------------
T ss_pred cCEEEeCCchH-----HHHHHHHHHhCCCCCCCCCCcchHhhCCcHHHHHHHHHHHHHHHHHhc----------------
Confidence 99999997754 7888899999854 4688999999999999999999999999999972
Q ss_pred cccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 540 TNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 540 ~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
..++++++..+.||....+|||+
T Consensus 371 ------------~~~~gl~~~c~ggG~g~a~~~e~ 393 (394)
T 3ss6_A 371 ------------GLEKGIASLCVGGGIGVALFIEA 393 (394)
T ss_dssp ------------TCCEEEEEEEETTTEEEEEEEEE
T ss_pred ------------CCCEEEEEEccCcCceeEEEEEc
Confidence 23567777788889999999986
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.98 E-value=3.3e-31 Score=281.58 Aligned_cols=270 Identities=22% Similarity=0.317 Sum_probs=214.5
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
...|+++++++||+|+|+++++|+ +|++|+.... ......+.+++..+
T Consensus 29 ~~~L~~~a~~~Al~~agi~~~~Id-------~v~~g~~~~~-------------------------~~~~~~a~~~~~~l 76 (395)
T 4e1l_A 29 AVQLGTIAVKEAISRVGLNLSEID-------EVIIGNVLQT-------------------------GLGQNVARQIAINA 76 (395)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCC-------EEEEECCCCS-------------------------STTCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCC-------------------------CCcchHHHHHHHHc
Confidence 457999999999999999998776 7899875421 11234688999999
Q ss_pred CC--CCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhH----------------------------
Q 008146 315 GW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLG---------------------------- 364 (576)
Q Consensus 315 gl--~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~---------------------------- 364 (576)
|+ ++|+++|+++|+|++.||+.|+++|++|++|.+||+|+|.+.......
T Consensus 77 Gl~~~~p~~~v~~~Css~~~al~~A~~~I~~G~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (395)
T 4e1l_A 77 GIPNSVPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFN 156 (395)
T ss_dssp TCCTTSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTHHHHSBHHHHEEESCCC------CCTTEEEETT
T ss_pred CCCCCceEEEccccchHHHHHHHHHHHHHhCCCCCEEEEEEEecccCCcccccccccccccCccccchhhcccccccccc
Confidence 99 689999999999999999999999999999999999999876532110
Q ss_pred ----HHHH----------------------hh--------hhhcc--------------CCCCCCCCCC-----------
Q 008146 365 ----GFVA----------------------CR--------ALSQR--------------NNDPTKASRP----------- 385 (576)
Q Consensus 365 ----~~~~----------------------~~--------~ls~~--------------~~~p~~~~rp----------- 385 (576)
+... .+ .+... ..+|++.+|+
T Consensus 157 ~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~~~~ei~pv~~~~~~g~~~~~~~d~~~r~~~t~e~l~~~~ 236 (395)
T 4e1l_A 157 QYHMGITAENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGKIETIDKDEYPKLGMTFEGLSKLK 236 (395)
T ss_dssp HHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEETTEEEEECSCSCCCTTCCHHHHHHCC
T ss_pred cchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeEeccCCCcceEECCccccCCCCCHHHHhhCC
Confidence 0000 00 00000 0124444443
Q ss_pred --Ccc-----CCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCC
Q 008146 386 --WDI-----NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSR 458 (576)
Q Consensus 386 --fd~-----~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~ 458 (576)
|+. ..|+..++||++++||++++.|+++|++|+++|.|++.+++. |.+.+.++..+++++|+++|+++
T Consensus 237 ~v~~~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~ai~~al~~agl~~ 311 (395)
T 4e1l_A 237 PAFKKDGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVE-----PEVMGTGPIPATRKALKKAGLSI 311 (395)
T ss_dssp BSSSTTCSCBTTSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECC-----GGGTTCTHHHHHHHHHHHTTCCG
T ss_pred CccCCCCCeeCCcCCCccceEEEEEEecHHHHHHCCCCeEEEEEEEEEccCC-----CCcchHHHHHHHHHHHHHcCCCH
Confidence 442 246777899999999999999999999999999999998752 33445568899999999999999
Q ss_pred CCccEEEecCCCCccCcHHHHHHHHHHHcCC-CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCC
Q 008146 459 EDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAV 537 (576)
Q Consensus 459 ~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~ 537 (576)
+||||||+|+..+ .|..++.+.|+-. .++++++.|.++||++||+|+.++++++++|+++
T Consensus 312 ~dId~ve~~d~fa-----~~~~~~~~~lg~~~~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~L~~~-------------- 372 (395)
T 4e1l_A 312 NDIDLIEANEAFA-----AQALAVKNELQIDSSKLNVNGGAIALGHPIGASGARILVTLIYEMQKR-------------- 372 (395)
T ss_dssp GGCSEEEECCSBH-----HHHHHHHHHHTCCGGGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHHH--------------
T ss_pred HHcCEEEecChhH-----HHHHHHHHHhCCCCCCCCcCCchhhcCCcHHHHHHHHHHHHHHHHHhc--------------
Confidence 9999999987654 7888888888854 4688999999999999999999999999999973
Q ss_pred CCcccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 538 VDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
..++++++..+.||...++|||+
T Consensus 373 --------------~~~~gl~~~c~ggG~g~a~~~e~ 395 (395)
T 4e1l_A 373 --------------KVETGLATLCIGGGQGISMVVSR 395 (395)
T ss_dssp --------------TCSEEEEEEESSTTEEEEEEEEC
T ss_pred --------------CCCEEEEEEccCCCceEEEEEeC
Confidence 23677888888999999999974
|
| >2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=7.5e-32 Score=286.62 Aligned_cols=243 Identities=18% Similarity=0.265 Sum_probs=189.8
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
.++|+++++++||+|+|+++++++ ++++|+..+. ...+..+.++++.+
T Consensus 32 ~~~l~~~a~~~Al~dAgl~~~~id-------~~~~g~~~~~-------------------------~~~~~~a~~va~~l 79 (395)
T 2ib8_A 32 ATKLGSIAIQGAIEKAGIPKEEVK-------EAYMGNVLQG-------------------------GEGQAPTRQAVLGA 79 (395)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSCCT-------------------------TSCSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCC-------------------------CCCchHHHHHHHHc
Confidence 367999999999999999987554 5778765421 11234688999999
Q ss_pred CC--CCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhh-------------------hHH--------
Q 008146 315 GW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG-------------------LGG-------- 365 (576)
Q Consensus 315 gl--~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~-------------------~~~-------- 365 (576)
|+ +||+++|+++|+|++.||++|+++|++|++|++||||+|.+..... +..
T Consensus 80 gl~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (395)
T 2ib8_A 80 GLPISTPCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVMNRGSTPYGGVKLEDLIVKDGLTDVYNKI 159 (395)
T ss_dssp TCCTTCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGCCEEECSSBCCTTCEEEEEHHHHHTTEETTTTE
T ss_pred CCCCCceEEEecccccHHHHHHHHHHHHHHCCCCCEEEEEeeecccCCcccccccccccccccccccccccccccccccc
Confidence 99 7999999999999999999999999999999999999998654211 000
Q ss_pred ---------HHHhhhhhcc-------------------C--------------------CCCCCCCCC--Ccc-------
Q 008146 366 ---------FVACRALSQR-------------------N--------------------NDPTKASRP--WDI------- 388 (576)
Q Consensus 366 ---------~~~~~~ls~~-------------------~--------------------~~p~~~~rp--fd~------- 388 (576)
+...+ ++.. + .+.++.+|+ ||.
T Consensus 160 ~m~~~a~~~~~~~g-~sre~~~~~A~~s~~~a~~a~~~~~f~~ei~p~~~~~~~~p~~~~~~D~~~r~~~~~~l~~l~~~ 238 (395)
T 2ib8_A 160 HMGSCAENTAKKLN-IARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVKGQPDVVVKEDEEYKRVDFSKVPKLKTV 238 (395)
T ss_dssp EHHHHHHHHHHHHT-CCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEECCTTSCCEEECSCSGGGSCCTTTGGGSCCT
T ss_pred hHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHhcccccCcccceeeeeecccCCcceeeccccccccCCHHHHhcCCcc
Confidence 01111 0000 0 001122222 554
Q ss_pred --CCCcce-------ecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 008146 389 --NRDGFV-------MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSRE 459 (576)
Q Consensus 389 --~~~G~v-------~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~ 459 (576)
+++|++ ++||++++||++++.|+++|++||++|+|++.++ +.|.+.+.++..+++++|+++|++++
T Consensus 239 f~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~-----~~p~~~~~~~~~a~~~al~~Agl~~~ 313 (395)
T 2ib8_A 239 FQKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAA-----VEPIDFPIAPVYAASMVLKDVGLKKE 313 (395)
T ss_dssp TCSSSCCCCTTTBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEE-----CCGGGGGGHHHHHHHHHHHHHTCCGG
T ss_pred ccCCCCCcccccCCccccceeEEEEecHHHHHhcCCCccEEEEEEEEec-----cChhhccccHHHHHHHHHHHcCCCHH
Confidence 568999 9999999999999999999999999999999874 22334566789999999999999999
Q ss_pred CccEEEecCCCCccCcHHHHHHHHHH--HcCC-CCcccccccccccccccchhHHHHHHHHHHHHc
Q 008146 460 DVNYINAHATSTPAGDIKEYQALIHC--FGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRT 522 (576)
Q Consensus 460 dId~ve~Hgtgt~~gD~~E~~Al~~~--f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~ 522 (576)
||||||+| |..|..+|..+ |+.. .++++++.|.++||++||+|+.++++++++|++
T Consensus 314 dId~ie~~-------D~f~~~~l~~~e~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~ 372 (395)
T 2ib8_A 314 DIAMWEVN-------EAFSLVVLANIKMLEIDPQKVNINGGAVSLGHPIGMSGARIVGHLTHALKQ 372 (395)
T ss_dssp GEEEEEEC-------CSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHSCT
T ss_pred HcCEEEEc-------cccHHHHHHHHHHcCCCccccCCCcchhhcCCChhHHHHHHHHHHHHHHhh
Confidence 99999965 56667777666 7753 468899999999999999999999999999975
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.4e-31 Score=283.41 Aligned_cols=272 Identities=19% Similarity=0.232 Sum_probs=209.2
Q ss_pred HHHHHHHHHHHHHHHhC-CCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHH
Q 008146 234 KFMLYLLTAGKKALADG-GITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAM 312 (576)
Q Consensus 234 p~~rl~l~aa~eAL~dA-Gi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~ 312 (576)
+.++|+++++++||+|+ |+++++|+ +|++|+...... .....+.+++.
T Consensus 26 ~~~~L~~~a~~~Al~~a~gi~~~~Id-------~v~~g~~~~~~~------------------------~~~~~a~~~~~ 74 (387)
T 3goa_A 26 RAEDLSAHLMRSLLARNPSLTAATLD-------DIYWGCVQQTLE------------------------QGFNIARNAAL 74 (387)
T ss_dssp CHHHHHHHHHHHHHHHCTTSCGGGCC-------EEEEECSCCSBT------------------------TTTTHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHcC-------EEEEEcccCCcc------------------------cccHHHHHHHH
Confidence 45789999999999999 99998776 799997642210 12346788999
Q ss_pred HhCC--CCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhh-------------------HH------
Q 008146 313 DLGW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGL-------------------GG------ 365 (576)
Q Consensus 313 ~lgl--~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~-------------------~~------ 365 (576)
.+|+ .+|+++|+++|+|++.||++|+++|++|++|++||+|+|.+...... .+
T Consensus 75 ~~Gl~~~~p~~~v~~aCss~l~Al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~ 154 (387)
T 3goa_A 75 LAEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEML 154 (387)
T ss_dssp HTTCCTTSCCEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECTTTSCTTTTBCCCTTCC-------CCCHHHHHHH
T ss_pred HcCCCCCCcEeEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEecCCCCccccccCcCcccccccccccccHHHHHHHH
Confidence 9999 57999999999999999999999999999999999999987643211 00
Q ss_pred -------------H---HHhh--------hhhcc--------------CCCCCCCCCC-------------Ccc------
Q 008146 366 -------------F---VACR--------ALSQR--------------NNDPTKASRP-------------WDI------ 388 (576)
Q Consensus 366 -------------~---~~~~--------~ls~~--------------~~~p~~~~rp-------------fd~------ 388 (576)
+ +..+ .+... ..++++.+|| |+.
T Consensus 155 ~~~~g~tre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~p~f~~~~g~~t 234 (387)
T 3goa_A 155 SRLHGISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVLKQFNYDEVIRPETTVEALSTLRPAFDPVSGTVT 234 (387)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECTTSCEEEECSCTTCCTTCCHHHHTTSCCSSCTTTCCCC
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHhHhcCCcccceeeeeeccccCcccccccccccCCCCCHHHHhcCCCcccCCCCcee
Confidence 0 0000 11100 0123444443 554
Q ss_pred CCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecC
Q 008146 389 NRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHA 468 (576)
Q Consensus 389 ~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hg 468 (576)
..|+..++||++++||+++++|+++|++|+++|+|++.++++.. +.+.++..+++++|+++|++++||||||+|+
T Consensus 235 ~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~agl~~~did~ve~h~ 309 (387)
T 3goa_A 235 AGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPS-----IMGYGPVPASKLALKKAGLSASDIDVFEMNE 309 (387)
T ss_dssp GGGBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCTT-----STTCTHHHHHHHHHHHHTCCGGGCSEEEECC
T ss_pred cccCCCcCccEEEEEEecHHHHHHcCCCccEEEEEEEEcCCCCC-----cchHHHHHHHHHHHHHcCCCHHHcCEEEEeC
Confidence 25777899999999999999999999999999999999987543 3344678999999999999999999999999
Q ss_pred CCCccCcHHHHHHHHHHHcC----CCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCccccc
Q 008146 469 TSTPAGDIKEYQALIHCFGQ----NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLV 544 (576)
Q Consensus 469 tgt~~gD~~E~~Al~~~f~~----~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~ 544 (576)
+++. .+... .+.++- ..++++++.|..+||++||+|+.++++++++|+++
T Consensus 310 ~f~~----~~~~~-~~~lg~~~~~~~~vn~~gg~~~~GH~~gasG~~~~~~~~~~L~~~--------------------- 363 (387)
T 3goa_A 310 AFAA----QILPC-IKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERK--------------------- 363 (387)
T ss_dssp SBHH----HHHHH-HHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT---------------------
T ss_pred cchH----HHHHH-HHHhCCCcCCCccCCCCCchhcccCCHHHHHHHHHHHHHHHHHhc---------------------
Confidence 9885 33333 344443 12477888899999999999999999999999971
Q ss_pred CCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 545 GPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 545 ~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
..++++++..+-||...++|||.
T Consensus 364 -------~~~~gl~~~c~ggG~g~a~~~e~ 386 (387)
T 3goa_A 364 -------DAQFGLATMCIGLGQGIATVFER 386 (387)
T ss_dssp -------TCSEEEEEEEETTTEEEEEEEEC
T ss_pred -------CCCEEEEEeccCcCceEEEEEEe
Confidence 23567776667778999999986
|
| >1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-31 Score=276.73 Aligned_cols=293 Identities=16% Similarity=0.165 Sum_probs=210.0
Q ss_pred EEEEecceecCCC-CCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhh-hcCCHHHHHHHHHHH
Q 008146 167 VVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLS-KRMDKFMLYLLTAGK 244 (576)
Q Consensus 167 IaItGmg~~~P~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a-~~mdp~~rl~l~aa~ 244 (576)
+.|+|+|...|.. .+.+++++.+.. + +.|-.. .. . |..+.. ...++..+|++++++
T Consensus 2 ~~I~~~g~~~P~~~~~~~~~~~~~~~--~-----~~~i~~-----~~----G------i~~r~~~~~~~~~~~la~~a~~ 59 (322)
T 1ub7_A 2 SGILALGAYVPERVMTNADFEAYLDT--S-----DEWIVT-----RT----G------IKERRVAAEDEYTSDLAFKAVE 59 (322)
T ss_dssp CEEEEEEEECCSEEEEHHHHHTTSSC--C-----HHHHHH-----HT----C------CCEEEECCTTCCHHHHHHHHHH
T ss_pred cEEEEEEEECCCceecHHHHHHHhCC--C-----HHHHHH-----hc----C------ceEEeecCCCCCHHHHHHHHHH
Confidence 4799999999988 667777653211 0 011000 00 0 111111 113457899999999
Q ss_pred HHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCCCCcccccc
Q 008146 245 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSIS 324 (576)
Q Consensus 245 eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv~ 324 (576)
+||+|+|+++++++ +|++|+.... ...+..+.+++..||+++|+++|+
T Consensus 60 ~al~~ag~~~~~id-------~vi~~~~~~~-------------------------~~~~~~a~~v~~~lgl~~~~~~v~ 107 (322)
T 1ub7_A 60 DLLRRHPGALEGVD-------AVIVATNTPD-------------------------ALFPDTAALVQARFGLKAFAYDLL 107 (322)
T ss_dssp HHHHHSTTTTTTEE-------EEEEECSSCS-------------------------EEESCHHHHHHHHTTCCCEEEEEE
T ss_pred HHHHHcCCCHHHCC-------EEEEEcCCCC-------------------------CCCCcHHHHHHHHhCCCCEEEeeC
Confidence 99999999987444 6888876421 111236889999999999999999
Q ss_pred CCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceEEEEE
Q 008146 325 TACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLLL 404 (576)
Q Consensus 325 taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAaalvL 404 (576)
++|+|++.||+.|+++|++|++|.+||+|+|.+ ++. ..|+| +++|+++||||+++||
T Consensus 108 ~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~-s~~---------------------~~~~d-~~~~~~~GdGA~A~vL 164 (322)
T 1ub7_A 108 AGCPGWIYALAQAHALVEAGLAQKVLAVGAEAL-SKI---------------------IDWND-RATAVLFGDGGGAAVV 164 (322)
T ss_dssp CSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECG-GGT---------------------SCTTC-HHHHTTBCCEEEEEEE
T ss_pred ccchHHHHHHHHHHHHHHcCCCCEEEEEEechh-ccc---------------------cChhh-cccceeeccccEEEEE
Confidence 999999999999999999999999999999984 221 11343 5679999999999999
Q ss_pred cchHHHHhcCCeeeEEE-EEEEEecCCCCCCC-----CCC---------Ch--------HHHHHHHHHHHHHcCCCCCCc
Q 008146 405 EELEHAKKRGAKIYAEF-RGGSFTSDAYHMTE-----PHP---------DG--------VGVILCIEKALAHSGVSREDV 461 (576)
Q Consensus 405 ~~~~~A~~~g~~i~a~I-~g~~~~~dg~~~~~-----~~p---------~~--------~~~~~ai~~AL~~Agl~~~dI 461 (576)
++.+. +..+++.+ .+.+...+..+... |.+ ++ ..+.++++++|+++|++++||
T Consensus 165 ~~~~~----~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~di 240 (322)
T 1ub7_A 165 GKVRE----GYGFRSFVLGADGTGAKELYHACVAPRLPDGTSMKNRLYMNGREVFKFAVRVMNTATLEAIEKAGLTPEDI 240 (322)
T ss_dssp ECCCT----TCEEEEEEEEECGGGCTTEEEESSCSBCTTSCBCCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred EecCC----CCceeEEEEEEecCCCCeEEeCCCCCCCCccccccceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHC
Confidence 98653 34566554 22222222221110 221 23 578899999999999999999
Q ss_pred cEEEecCCCCccCcHHHHHHHHHHHcCCCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcc
Q 008146 462 NYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTN 541 (576)
Q Consensus 462 d~ve~Hgtgt~~gD~~E~~Al~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~ 541 (576)
|||++|+++++..|. +.+.|+...+ .+.+.|..+||+.+|++.+.+.+ +++++.+.
T Consensus 241 d~~~~H~~~~~~~d~-----~~~~lg~~~~-~~~~~~~~~Gh~~~As~~~~l~~---~l~~g~~~--------------- 296 (322)
T 1ub7_A 241 RLFVPHQANLRIIDA-----ARERLGLPWE-RVAVNVDRYGNTSTASIPLALKE---AVDAGRIR--------------- 296 (322)
T ss_dssp SEEEECCSCHHHHHH-----HHHTTTCCGG-GBCCCHHHHCBCGGGHHHHHHHH---HHHHTSSC---------------
T ss_pred CEEEEcCCCHHHHHH-----HHHHcCCCHH-HHHHHHHhhCcHHHHHHHHHHHH---HHHhCCCC---------------
Confidence 999999999988763 5667765421 24577999999999999997765 45666541
Q ss_pred cccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 542 VLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 542 ~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
+.+.+++++||+|++|+++||+.
T Consensus 297 ----------~g~~~l~~~~G~G~~~~~~vl~~ 319 (322)
T 1ub7_A 297 ----------EGDHVLLVSFGAGLTWAAAVLTW 319 (322)
T ss_dssp ----------TTCEEEEEEEETTTEEEEEEEEC
T ss_pred ----------CCCEEEEEEEChhheeEEEEEEe
Confidence 23678999999999999999974
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.3e-30 Score=272.21 Aligned_cols=271 Identities=16% Similarity=0.169 Sum_probs=200.7
Q ss_pred HHHHHHHHHHHHHHh-CCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHH
Q 008146 235 FMLYLLTAGKKALAD-GGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 313 (576)
Q Consensus 235 ~~rl~l~aa~eAL~d-AGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~ 313 (576)
...|+.+++++||+| +|+++++|| +|++|+..... ......+.+++..
T Consensus 32 ~~~L~~~A~~~AL~~~AGl~~~dId-------~vi~g~~~~~~------------------------~~~~~~a~~va~~ 80 (407)
T 3svk_A 32 PLNLVVGLVDELRRRYPDLDETLIS-------DMILGVVSPVG------------------------DQGGDIARTAVLA 80 (407)
T ss_dssp HHHHHHHHHHHHHHHSTTCCGGGEE-------EEEEECC--------------------------------CHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcCcCHHHCC-------EEEEEecCccc------------------------cccCcHHHHHHHH
Confidence 467999999999999 999998776 78998753210 0123457899999
Q ss_pred hCC--CCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhh--------------------hHHH-----
Q 008146 314 LGW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIG--------------------LGGF----- 366 (576)
Q Consensus 314 lgl--~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~--------------------~~~~----- 366 (576)
+|+ .+|+++|+++|+|++.||+.|+++|++|++|++||+|+|.+..... ..++
T Consensus 81 lGlp~~~pa~~v~~~Css~~~Al~~A~~~I~sG~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~Ae~~ 160 (407)
T 3svk_A 81 AGLPETTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMSRVPMGSDGGAWATDPETNYRIGFVPQGIGADLI 160 (407)
T ss_dssp TTCCTTCEEEEEC---CBSCCHHHHHHHHHHHTSCCEEEEEEEECC-----------CCCCTTTCCCCCCHHHHHHHHHH
T ss_pred cCCCCCCceEEecCcChhHHHHHHHHHHHHHcCCCCEEEEEEEcccccCcccccccccccCchhhccccccCHHHHHHHH
Confidence 999 6799999999999999999999999999999999999998764210 0000
Q ss_pred -----------HHh--------------hhhhc--------c---CCCCCCCCCC-------------CccC--------
Q 008146 367 -----------VAC--------------RALSQ--------R---NNDPTKASRP-------------WDIN-------- 389 (576)
Q Consensus 367 -----------~~~--------------~~ls~--------~---~~~p~~~~rp-------------fd~~-------- 389 (576)
... +.+.. . ..+|+..+|+ |+..
T Consensus 161 a~~~~i~re~~d~~a~~s~~~A~~A~~~g~~~~ei~pv~~~~g~~~~~pd~~~r~~~t~e~l~~~~~vf~~~g~v~~~~~ 240 (407)
T 3svk_A 161 ATLEGFSREDVDAYALRSQQKAAAAWSGGYFAKSVVPVRDQNGLVILDHDEHMRPDTTMEGLAKLKTAFDGVGEMGGFDD 240 (407)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEECTTSCEEECSCTTCCTTCCHHHHHTSCBSCC----------
T ss_pred HHHhCcCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeecCCCceeeCCccccCCCCCHHHHhhCCCeecCCCccccccc
Confidence 000 00000 0 0234555553 4422
Q ss_pred ------------------CCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHH
Q 008146 390 ------------------RDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKAL 451 (576)
Q Consensus 390 ------------------~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL 451 (576)
.|...++||++++||++++.|+++|++|+++|.|++.+++.... .+.+...+++++|
T Consensus 241 ~~~~~~~~~~~i~~~~t~~~~s~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~-----~~~~~~~a~~~al 315 (407)
T 3svk_A 241 VALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIVATATSGSDPVI-----MLTGPTPATRKVL 315 (407)
T ss_dssp ---CTTTTCSSCCCCCBTTTBCCBEEEEEEEEEECHHHHHHTTCCCCEEEEEEEEC-----------CCCTHHHHHHHHH
T ss_pred cccccccccccccccccccccCcccCceeEEEEeeHHHHHHcCCCCcEEEEEEEEeccCCcc-----ccHHHHHHHHHHH
Confidence 46667999999999999999999999999999999998764332 2345578999999
Q ss_pred HHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCC-CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCC
Q 008146 452 AHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNIN 530 (576)
Q Consensus 452 ~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~ 530 (576)
+++|++++||||||+|++++. .|... .+.|+-. .++++++.|..+||++||+|+.++++++++|++.
T Consensus 316 ~~Agl~~~dId~~e~hdaf~~----~~l~~-~~~lg~~~~~vn~~Gg~~~~GHp~gasG~~~~~~~~~~L~~~------- 383 (407)
T 3svk_A 316 DRAGLTIDDIDLFELNEAFAS----VVLKF-QKDLNIPDEKLNVNGGAIAMGHPLGATGAMITGTMVDELERR------- 383 (407)
T ss_dssp HHHTCCGGGCSEEEECCSBHH----HHHHH-HHHHTCCGGGBSTTCCHHHHCBCGGGHHHHHHHHHHHHHHHH-------
T ss_pred HHcCCCHHHCCEEEEeChhHH----HHHHH-HHHhCCCCCCCCCCCcHhheeCcHHHHHHHHHHHHHHHHHhc-------
Confidence 999999999999999999885 34433 3456543 3578899999999999999999999999999862
Q ss_pred CCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 531 LENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 531 ~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
..++++++..+.||....+|||+
T Consensus 384 ---------------------~~~~gl~~~c~ggG~g~a~~~e~ 406 (407)
T 3svk_A 384 ---------------------NARRALITLCIGGGMGVATIIER 406 (407)
T ss_dssp ---------------------TCCEEEEEEECSSSCEEEEEEEE
T ss_pred ---------------------CCCEEEEEeeccCcceEEEEEEc
Confidence 24678888889999999999986
|
| >2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-29 Score=260.07 Aligned_cols=289 Identities=15% Similarity=0.222 Sum_probs=208.2
Q ss_pred cEEEEecceecCCC-CCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 008146 166 RVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 244 (576)
Q Consensus 166 ~IaItGmg~~~P~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa~ 244 (576)
++.|+|+|+.+|.. .+.+++++.+. .+ +.|-. ... . |..+.....++..+|++++++
T Consensus 2 ~~~I~~~g~~~P~~~~~~~~~~~~~~--~~-----~~~i~-----~~~----G------i~~r~~~~~~~~~~l~~~a~~ 59 (309)
T 2ebd_A 2 GTKIIGTGVYLPKNVLTNFDLEKIVD--TS-----DEWIT-----TRT----G------IKERRIAKEETITYMATQAAK 59 (309)
T ss_dssp CEEEEEEEEECCSEEEEHHHHHTTSS--CC-----HHHHH-----HHH----C------CCEEEECSSCCHHHHHHHHHH
T ss_pred ceEEEEEEEECCCceEcHHHHHHHcC--CC-----HHHHH-----HHh----C------ceeeeecCCCCHHHHHHHHHH
Confidence 48999999999998 56777664321 10 00000 000 0 111111111568899999999
Q ss_pred HHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCCCC-ccccc
Q 008146 245 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG-PNYSI 323 (576)
Q Consensus 245 eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv 323 (576)
+||+|+|+++++++ +|++|+..+++ ..+..+.+++..||+++ |+++|
T Consensus 60 ~al~~ag~~~~~id-------~v~~~~~~~~~-------------------------~~~~~a~~v~~~lgl~~~~~~~v 107 (309)
T 2ebd_A 60 EALREANLSPEELD-------LIILATLTPQK-------------------------RFPSTACLVQAQLKAKGVYAFDI 107 (309)
T ss_dssp HHHHHHTCCGGGCS-------EEEEECSSCSS-------------------------SSSCHHHHHHHHHTCTTCEEEEE
T ss_pred HHHHHcCCCHHHCC-------EEEEEcCCCCC-------------------------CCCcHHHHHHHHhCCCCceEEec
Confidence 99999999987554 79999864211 11236889999999998 99999
Q ss_pred cCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceEEEE
Q 008146 324 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 403 (576)
Q Consensus 324 ~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAaalv 403 (576)
+++|+|++.||+.|+++|++|++|.+||+|+|.+... + . |++..+|+++|||++++|
T Consensus 108 ~~~C~s~~~al~~A~~~i~~g~~~~vlv~g~e~~s~~-----------~-----------~-~~~~~~~~~~gdGaaA~v 164 (309)
T 2ebd_A 108 SAACSGFIYALDIADSFIKSGKAKNVLVIGAEKLSEA-----------V-----------D-WEDRSTCVLFGDGAGAVV 164 (309)
T ss_dssp ECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGT-----------C-----------C-TTCTTTTTTBCEEEEEEE
T ss_pred CccchHHHHHHHHHHHHHHCCCCCEEEEEEecccccc-----------c-----------C-ccchhhccccccccEEEE
Confidence 9999999999999999999999999999999984311 0 1 334568999999999999
Q ss_pred EcchHHHHhcCCeeeEEEEEEEEecCCC---CCCCC-----CCChH--------HHHHHHHHHHHHcCCCCCCccEEEec
Q 008146 404 LEELEHAKKRGAKIYAEFRGGSFTSDAY---HMTEP-----HPDGV--------GVILCIEKALAHSGVSREDVNYINAH 467 (576)
Q Consensus 404 L~~~~~A~~~g~~i~a~I~g~~~~~dg~---~~~~~-----~p~~~--------~~~~ai~~AL~~Agl~~~dId~ve~H 467 (576)
|++.+.+ ..+++. ...+|+. +...| .+++. .+.++++++|+++|++++|||||++|
T Consensus 165 L~~~~~~----~~i~~~----~~~~~g~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H 236 (309)
T 2ebd_A 165 VTRSEDK----SDILAT----RMYAEGSLEELLHADNCGYIRMKGRELFKVAVRSMEEVCREVLEKAGVKPEEVSLVIPH 236 (309)
T ss_dssp EEECSSS----CEEEEE----EEEECGGGGGGEEECTTCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEC
T ss_pred EEecCCC----CceeEE----EEEecCCccceeEeCCCCeEEEccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEc
Confidence 9987643 234443 3444443 22222 22443 67899999999999999999999999
Q ss_pred CCCCccCcHHHHHHHHHHHcCCCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCc
Q 008146 468 ATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPK 547 (576)
Q Consensus 468 gtgt~~gD~~E~~Al~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~ 547 (576)
+++++..| ++.+.|+...+ .+.+.|.++||+.+|++.+.|.+++ +++.+.
T Consensus 237 ~~~~~~~~-----~~~~~lg~~~~-~~~~~~~~~Gh~~~As~~~~L~~~~---~~g~~~--------------------- 286 (309)
T 2ebd_A 237 QANVRIIN-----ALAEKLNIPKE-KVFVNIQKYGNTSAASIPIALHEAI---KEGKVK--------------------- 286 (309)
T ss_dssp CSCHHHHH-----HHHHHTTCCGG-GBCCCHHHHCBCGGGHHHHHHHHHH---HTTCCC---------------------
T ss_pred CCCHHHHH-----HHHHHhCCCHH-HhhhhHhhhcchHHHHHHHHHHHHH---HcCCCC---------------------
Confidence 99998755 45677775421 2346789999999999999987764 333221
Q ss_pred ccccCccEEEEeccCCCcceeEEEEe
Q 008146 548 KERLEVKAALSNSFGFGGHNSSIIFS 573 (576)
Q Consensus 548 ~~~~~~~~alv~sfG~gG~na~vil~ 573 (576)
+.+.++..+||.|.+..+++++
T Consensus 287 ----~G~~~l~~~~G~G~~~~~~~l~ 308 (309)
T 2ebd_A 287 ----RGDLILMTAMGGGLTWGAVLLR 308 (309)
T ss_dssp ----TTCEEEEEEEETTTEEEEEEEE
T ss_pred ----CCCEEEEEEEchhhhhEEEEEE
Confidence 1246788899999999999986
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-29 Score=261.54 Aligned_cols=292 Identities=16% Similarity=0.188 Sum_probs=210.0
Q ss_pred cEEEEecceecCCC-CCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhh-hcCCHHHHHHHHHH
Q 008146 166 RVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLS-KRMDKFMLYLLTAG 243 (576)
Q Consensus 166 ~IaItGmg~~~P~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a-~~mdp~~rl~l~aa 243 (576)
++.|+|+|+..|.. .+.+++++.+. .+ +.|-. ...| |..+.. ...++..+|+++++
T Consensus 2 ~~~I~~~g~~~P~~~~~~~~~~~~~~--~~-----~~~i~-----~~~G----------i~~r~~~~~~~~~~~l~~~a~ 59 (317)
T 1hnj_A 2 YTKIIGTGSYLPEQVRTNADLEKMVD--TS-----DEWIV-----TRTG----------IRERHIAAPNETVSTMGFEAA 59 (317)
T ss_dssp EEEEEEEEEECCSEEEEHHHHHTTSS--CC-----HHHHH-----HHHC----------CCEEEECCTTCCHHHHHHHHH
T ss_pred CcEEEEEEEeCCCceecHHHHHHHhC--CC-----HHHHH-----HHhC----------ceEEEecCCCCCHHHHHHHHH
Confidence 47899999999998 56777765321 10 01100 0000 222221 13456889999999
Q ss_pred HHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCCC-Ccccc
Q 008146 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM-GPNYS 322 (576)
Q Consensus 244 ~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~~t 322 (576)
++||+|+|+++++++ +|++|+.... ...+..+.+++..||++ +|+++
T Consensus 60 ~~al~~ag~~~~~id-------~vi~g~~~~~-------------------------~~~~~~a~~v~~~lgl~~~~~~~ 107 (317)
T 1hnj_A 60 TRAIEMAGIEKDQIG-------LIVVATTSAT-------------------------HAFPSAACQIQSMLGIKGCPAFD 107 (317)
T ss_dssp HHHHHHHTCCGGGCC-------EEEEECSCCS-------------------------CSSSCHHHHHHHHHTCCSSCEEE
T ss_pred HHHHHHcCCCHHHCC-------EEEEEcCCCC-------------------------CCCCcHHHHHHHHhCCCCCeEEe
Confidence 999999999987554 7888876421 11235688999999997 89999
Q ss_pred ccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceEEE
Q 008146 323 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 402 (576)
Q Consensus 323 v~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAaal 402 (576)
|+++|+|++.||+.|+++|++|++|.+||+|+|.+... +. |++..+|+++||||+++
T Consensus 108 v~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~s~~-----------~~------------~~d~~~~~~~GdGA~A~ 164 (317)
T 1hnj_A 108 VAAACAGFTYALSVADQYVKSGAVKYALVVGSDVLART-----------CD------------PTDRGTIIIFGDGAGAA 164 (317)
T ss_dssp ECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECHHHH-----------SC------------TTCHHHHTTBCCEEEEE
T ss_pred eCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechhccc-----------CC------------chhcccceeeccccEEE
Confidence 99999999999999999999999999999999973211 00 22234589999999999
Q ss_pred EEcchHHHHhcCCeeeEEEEEE-EEecCCCCCCCC-----------CCChH--------HHHHHHHHHHHHcCCCCCCcc
Q 008146 403 LLEELEHAKKRGAKIYAEFRGG-SFTSDAYHMTEP-----------HPDGV--------GVILCIEKALAHSGVSREDVN 462 (576)
Q Consensus 403 vL~~~~~A~~~g~~i~a~I~g~-~~~~dg~~~~~~-----------~p~~~--------~~~~ai~~AL~~Agl~~~dId 462 (576)
||++.+. ..|++.+.+. +...|..+...+ .+++. .+.++|+++|+++|++++|||
T Consensus 165 vL~~~~~-----~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~aL~~agl~~~did 239 (317)
T 1hnj_A 165 VLAASEE-----PGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRSQLD 239 (317)
T ss_dssp EEEEESS-----CSEEEEEEEECGGGGGGEECCCCCSSCTTSCCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCC
T ss_pred EEEecCC-----CceeeEEEEEcCCCCCeEEECCCCCCCCCCCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC
Confidence 9998653 3577776542 222222222211 12344 678999999999999999999
Q ss_pred EEEecCCCCccCcHHHHHHHHHHHcCCCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCccc
Q 008146 463 YINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNV 542 (576)
Q Consensus 463 ~ve~Hgtgt~~gD~~E~~Al~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~ 542 (576)
||++|+++++..| ++.+.|+... -.+.+.|+++||+.+|++.+.|..+ ++++.+.
T Consensus 240 ~v~~H~~~~~~~d-----~i~~~lg~~~-~~~~~~~~~~Gn~~~As~~~~L~~~---~~~~~~~---------------- 294 (317)
T 1hnj_A 240 WLVPHQANLRIIS-----ATAKKLGMSM-DNVVVTLDRHGNTSAASVPCALDEA---VRDGRIK---------------- 294 (317)
T ss_dssp EEEECCSCHHHHH-----HHHHHTTCCG-GGBCCCHHHHCBCGGGHHHHHHHHH---HHTTCSC----------------
T ss_pred EEEEcCCCHHHHH-----HHHHHcCCCH-HHhHhhHhhhCcHHHHHHHHHHHHH---HHhCCCC----------------
Confidence 9999999998866 4667777542 2356889999999999999887655 4444331
Q ss_pred ccCCcccccCccEEEEeccCCCcceeEEEEe
Q 008146 543 LVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573 (576)
Q Consensus 543 ~~~~~~~~~~~~~alv~sfG~gG~na~vil~ 573 (576)
+-+..+..+||.|.+...++|+
T Consensus 295 ---------~G~~vll~~~G~G~t~~~~~l~ 316 (317)
T 1hnj_A 295 ---------PGQLVLLEAFGGGFTWGSALVR 316 (317)
T ss_dssp ---------TTCEEEEEEEETTTEEEEEEEE
T ss_pred ---------CCCEEEEEEEchhheeEEEEEE
Confidence 1245777899999999998885
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.6e-29 Score=260.67 Aligned_cols=295 Identities=18% Similarity=0.204 Sum_probs=208.0
Q ss_pred CCcEEEEecceecCCC-CCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhh-hcCCHHHHHHHH
Q 008146 164 QKRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLS-KRMDKFMLYLLT 241 (576)
Q Consensus 164 ~~~IaItGmg~~~P~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a-~~mdp~~rl~l~ 241 (576)
+.++.|+|+|+.+|.. .+.+++|+.+... +.|-. ... . |..+.. ...++..+|+++
T Consensus 9 ~~~~~I~gig~~~P~~~~~~~~~~~~~~~~-------~~~i~-----~~~----G------i~~R~~~~~~~~~~~la~~ 66 (339)
T 1mzj_A 9 RRFSRVLGVGSYRPRREVSNKEVCTWIDST-------EEWIE-----TRT----G------IRSRRIAEPDETIQVMGVA 66 (339)
T ss_dssp CCEEEEEEEEEECCSCEEEHHHHTTTSSCC-------HHHHH-----HHH----C------CSEEECCCTTCCHHHHHHH
T ss_pred cCceEEEEEEEeCCCccccHHHHHHHhCCC-------HHHHH-----Hhc----C------ceEEEEeCCCCCHHHHHHH
Confidence 4579999999999998 6777777543210 11100 000 0 112211 123567899999
Q ss_pred HHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCCC-Ccc
Q 008146 242 AGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM-GPN 320 (576)
Q Consensus 242 aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~ 320 (576)
++++||+|+|+++++++ +|++|+..+++ .....+.+++..||++ +|+
T Consensus 67 Aa~~al~~ag~~~~~id-------~vi~gt~~~~~-------------------------~~p~~a~~v~~~lgl~~~~~ 114 (339)
T 1mzj_A 67 ASRRALEHAGVDPAEID-------LVVVSTMTNFV-------------------------HTPPLSVAIAHELGADNAGG 114 (339)
T ss_dssp HHHHHHHHHTCCGGGCC-------EEEEECSCCCC-------------------------CSSCHHHHHHHHHTCTTCEE
T ss_pred HHHHHHHHcCCCHHHCC-------EEEEEecCCCC-------------------------CCChHHHHHHHHhCCCCccE
Confidence 99999999999987555 78999865321 1123678999999998 799
Q ss_pred ccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceE
Q 008146 321 YSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 400 (576)
Q Consensus 321 ~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAa 400 (576)
++|+++|+|++.||+.|+++|++|++|.+||+|+|.+. +. +. +++..+|+++||||+
T Consensus 115 ~~v~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~s-~~----------~~------------~~d~~~~~~~GdGA~ 171 (339)
T 1mzj_A 115 FDLSAACAGFCHALSIAADAVESGGSRHVLVVATERMT-DV----------ID------------LADRSLSFLFGDGAG 171 (339)
T ss_dssp EEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEEGG-GG----------SC------------SSCTTTTTTBCEEEE
T ss_pred EEccccchHHHHHHHHHHHHHHCCCCCEEEEEEEcccc-cc----------cC------------ccccccceEeccCce
Confidence 99999999999999999999999999999999999843 31 11 123467999999999
Q ss_pred EEEEcchHHHHhcCCeeeEEE-EEEEEecCCCCCC--CCC-------------CCh--------HHHHHHHHHHHHHcCC
Q 008146 401 VLLLEELEHAKKRGAKIYAEF-RGGSFTSDAYHMT--EPH-------------PDG--------VGVILCIEKALAHSGV 456 (576)
Q Consensus 401 alvL~~~~~A~~~g~~i~a~I-~g~~~~~dg~~~~--~~~-------------p~~--------~~~~~ai~~AL~~Agl 456 (576)
++||++.+. ..|++.. .+.+...+..+.. .|. .++ ..+.++|+++|+++|+
T Consensus 172 A~vL~~~~~-----~~i~~~~~~~~g~~~~~~~~~g~~p~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl 246 (339)
T 1mzj_A 172 AAVVGPSDV-----PGIGPVVRGIDGTGLGSLHMSSSWDQYVEDPSVGRPALVMDGKRVFRWAVADVVPAAREALEVAGL 246 (339)
T ss_dssp EEEEEEESS-----CCBCCCEEEECGGGGGGEEESCCHHHHTTCSSSCSCCEEECHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred EEEEEecCC-----CCeEEEEEEEcCCCCCeEEecCCCCCcccccccccceEEeeCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999997642 3455432 2222222222211 011 022 5678899999999999
Q ss_pred CCCCccEEEecCCCCccCcHHHHHHHHHHHcCCCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCC
Q 008146 457 SREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDA 536 (576)
Q Consensus 457 ~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~ 536 (576)
+++|||||++|+++++++|. +.+.|+-...-.+.....++||+.+|++.+.|.++ ++++.+.
T Consensus 247 ~~~did~v~~H~~~~~~~d~-----i~~~lg~~~~~~~~~~~~~~Gn~~sAs~~~~L~~~---~~~g~~~---------- 308 (339)
T 1mzj_A 247 TVGDLVAFVPHQANLRIIDV-----LVDRLGVPEHVVVSRDAEDTGNTSSASVALALDRL---VRSGAVP---------- 308 (339)
T ss_dssp CGGGCSEEEECCSCHHHHHH-----HHHHHTCCTTSEECCTHHHHCBCTTHHHHHHHHHH---HHHTSSC----------
T ss_pred CHHHCCEEEECCCCHHHHHH-----HHHHhCCCccceeeehhhhcCchHHHHHHHHHHHH---HHcCCCC----------
Confidence 99999999999999998874 55667654320222334689999999998887654 4444331
Q ss_pred CCCcccccCCcccccCccEEEEeccCCCcceeEEEEe
Q 008146 537 VVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573 (576)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~ 573 (576)
+.+.++..+||.|.++++++|+
T Consensus 309 ---------------~G~~vll~~~G~G~t~~~~~l~ 330 (339)
T 1mzj_A 309 ---------------GGGPALMIGFGAGLSYAGQALL 330 (339)
T ss_dssp ---------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred ---------------CCCEEEEEEEchhheeEEEEEE
Confidence 2356788999999999999986
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-28 Score=253.55 Aligned_cols=292 Identities=15% Similarity=0.219 Sum_probs=204.2
Q ss_pred cEEEEecceecCCC-CCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhh-hhcCCHHHHHHHHHH
Q 008146 166 RVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKL-SKRMDKFMLYLLTAG 243 (576)
Q Consensus 166 ~IaItGmg~~~P~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~-a~~mdp~~rl~l~aa 243 (576)
++.|+|+|...|.. .+.+++++.+. .+ +.|-.. . .. |..+. ....++..+|+++++
T Consensus 2 ~~~I~~~g~~~P~~~~~~~~~~~~~~--~~-----~~~i~~-----~----~g------i~~r~~~~~~~~~~~l~~~a~ 59 (313)
T 1zow_A 2 NVGIKGFGAYAPEKIIDNAYFEQFLD--TS-----DEWISK-----M----TG------IKERHWADDDQDTSDLAYEAS 59 (313)
T ss_dssp CEEEEEEEEECCSCEEEGGGGGGTSS--CC-----HHHHHH-----H----HC------CSEEECCCTTCCHHHHHHHHH
T ss_pred ceEEEEEEEECCCccccHHHHHHhcC--CC-----HHHHHH-----h----hC------ceEEEecCCCCCHHHHHHHHH
Confidence 47899999999987 56666654321 10 000000 0 00 11111 111235689999999
Q ss_pred HHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCCC-Ccccc
Q 008146 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM-GPNYS 322 (576)
Q Consensus 244 ~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~~t 322 (576)
++||+|+|+++++++ +|++|+..+++ ..+..+.+++..+|++ +|+++
T Consensus 60 ~~al~~ag~~~~~id-------~vi~~~~~~~~-------------------------~~~~~a~~v~~~lgl~~~~~~~ 107 (313)
T 1zow_A 60 VKAIADAGIQPEDID-------MIIVATATGDM-------------------------PFPTVANMLQERLGTGKVASMD 107 (313)
T ss_dssp HHHHHHHTCCGGGCC-------EEEEECSSCSC-------------------------SSSCHHHHHHHHHTCCSCCEEE
T ss_pred HHHHHHcCCCHHHCC-------EEEEEcCCCCC-------------------------CCCcHHHHHHHHhCCCCCcEEE
Confidence 999999999987554 78998764321 1123578999999998 69999
Q ss_pred ccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceEEE
Q 008146 323 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 402 (576)
Q Consensus 323 v~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAaal 402 (576)
|+++|+|++.||+.|+++|++|++|.+||+|+|.+... .+|+|. .+|+++|||++++
T Consensus 108 v~~aCas~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~----------------------~~~~d~-~~~~~~gdGa~A~ 164 (313)
T 1zow_A 108 QLAACSGFMYSMITAKQYVQSGDYHNILVVGADKLSKI----------------------TDLTDR-STAVLFGDGAGAV 164 (313)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEEGGGT----------------------CCTTCH-HHHTTBCEEEEEE
T ss_pred ECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcccccc----------------------cCcccc-cceeeeccceEEE
Confidence 99999999999999999999999999999999984321 124443 3689999999999
Q ss_pred EEcchHHHHhcCCeeeEE-EEEEEEecCCCCCCCC----CCCh--------HHHHHHHHHHHHHcCCCCCCccEEEecCC
Q 008146 403 LLEELEHAKKRGAKIYAE-FRGGSFTSDAYHMTEP----HPDG--------VGVILCIEKALAHSGVSREDVNYINAHAT 469 (576)
Q Consensus 403 vL~~~~~A~~~g~~i~a~-I~g~~~~~dg~~~~~~----~p~~--------~~~~~ai~~AL~~Agl~~~dId~ve~Hgt 469 (576)
||++.+. +..+++. +.+.+...+..+...+ .+++ ..+.++++++|+++|++++|||||++|++
T Consensus 165 vl~~~~~----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~ 240 (313)
T 1zow_A 165 IIGEVSE----GRGIISYEMGSDGTGGKHLYLDKDTGKLKMNGREVFKFAVRIMGDASTRVVEKANLTSDDIDLFIPHQA 240 (313)
T ss_dssp EEEECST----TCEEEEEEEEECGGGGGGEEECTTTCCEEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCS
T ss_pred EEEecCC----CCceeEEEEEEcCCCcCeEEecCCCCeeEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCC
Confidence 9998653 3445443 2222222222222111 1123 36788999999999999999999999999
Q ss_pred CCccCcHHHHHHHHHHHcCCC-CcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcc
Q 008146 470 STPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKK 548 (576)
Q Consensus 470 gt~~gD~~E~~Al~~~f~~~~-~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~ 548 (576)
+++.+|.+ .+.|+-.. +++ ..|..+||+.+|++.+.|.++ ++++.+
T Consensus 241 ~~~~~d~~-----~~~lg~~~~~~~--~~~~~~Gh~~~as~~~~L~~~---~~~~~~----------------------- 287 (313)
T 1zow_A 241 NIRIMESA-----RERLGISKDKMS--VSVNKYGNTSAASIPLSIDQE---LKNGKL----------------------- 287 (313)
T ss_dssp CHHHHHHH-----HHHHTCCGGGBC--CCHHHHCBCGGGHHHHHHHHH---HHTTCC-----------------------
T ss_pred CHHHHHHH-----HHHhCCCHHHHH--HhHhhhCchHHHHHHHHHHHH---HHcCCC-----------------------
Confidence 99988764 55666432 233 468999999999999988765 344322
Q ss_pred cccCccEEEEeccCCCcceeEEEEe
Q 008146 549 ERLEVKAALSNSFGFGGHNSSIIFS 573 (576)
Q Consensus 549 ~~~~~~~alv~sfG~gG~na~vil~ 573 (576)
.+.+.+++.+||.|.+.++++|+
T Consensus 288 --~~g~~vl~~~~G~G~t~~~~~l~ 310 (313)
T 1zow_A 288 --KDDDTIVLVGFGGGLTWGAMTIK 310 (313)
T ss_dssp --CTTCEEEEEEEETTTEEEEEEEE
T ss_pred --CCCCEEEEEEEchhhhheEEEEE
Confidence 02356788999999999999986
|
| >4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-27 Score=260.77 Aligned_cols=307 Identities=13% Similarity=0.083 Sum_probs=207.9
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
..|+.+++++||+|||+++++|++. -.|++++...... .............+..++..+|
T Consensus 43 ~dL~a~Ai~~AL~dAGl~p~~Vd~v---I~g~~~~~~~~~~-----------------~~~~~~~g~~~~~~~~va~~lG 102 (520)
T 4egv_A 43 VELATEAAKAALHDCGADADTVARA---IDTVAGTRQFEIS-----------------GPASAPLGVSSNYPRSVARNIG 102 (520)
T ss_dssp HHHHHHHHHHHHHHTSSCHHHHHHH---CCEEEECCC-------------------------------CCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCcCHHHcceE---EEEEeeccccccc-----------------chhhhhhccccCHHHHHHHHcC
Confidence 3588999999999999999866632 2344444322100 0011122234456788999999
Q ss_pred CCC-ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHH-----------------------------
Q 008146 316 WMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGG----------------------------- 365 (576)
Q Consensus 316 l~G-p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~----------------------------- 365 (576)
+.+ +.++++.+|+|++.+|++|++.|++|++|++|+||+|+|.+...+..
T Consensus 103 l~~~~~~~~~~~caSg~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 182 (520)
T 4egv_A 103 ADPAHAVLEVIGGQSPQHLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAENKPDHSETVDGQLEDRGYGYDGIFDEY 182 (520)
T ss_dssp CCCSEEEECCSSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECCC----------------------------------CT
T ss_pred CCCceEEEecCCCHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccccccccccccCccccccccccccccccchhHHHH
Confidence 987 78889999999999999999999999999999999999854321100
Q ss_pred --------------HHHhhhhhcc----------------------CCCCCCCC--------------------CCCccC
Q 008146 366 --------------FVACRALSQR----------------------NNDPTKAS--------------------RPWDIN 389 (576)
Q Consensus 366 --------------~~~~~~ls~~----------------------~~~p~~~~--------------------rpfd~~ 389 (576)
+......... ..+|+... .|+..-
T Consensus 183 ~~~~g~~~~~~~~~~~~s~~~a~~g~~~~~f~~eia~v~v~~~~~a~~np~a~~r~~~t~E~l~~l~p~~r~i~~p~~ta 262 (520)
T 4egv_A 183 TIRHGLIGAPVQYGLLENARRARLGLSVADYRLAMAELFAPFSKVAAKNPYSSAPTERSVEELLTVTASNRMIVDPYPRL 262 (520)
T ss_dssp TGGGTCCSHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHCTTSSSCCCCCHHHHHSCCSSSCEEETTEEGG
T ss_pred HHHhCCCcHHHHHHHHHHHHHHHHccccchhhhheeEEEEecccccccCccccccCCCCHHHhcccCcccccccCCcccc
Confidence 0000000000 00111111 122223
Q ss_pred CCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCC--CCC-CChHHHHHHHHHHHHHcCCCCCCccEEEe
Q 008146 390 RDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMT--EPH-PDGVGVILCIEKALAHSGVSREDVNYINA 466 (576)
Q Consensus 390 ~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~--~~~-p~~~~~~~ai~~AL~~Agl~~~dId~ve~ 466 (576)
.|...++|||+++||.+++.|++.|.+++++|.+++......... .+. ....++..+++++|+++|++++|||+||+
T Consensus 263 ~nas~isDGAAAvVL~S~e~A~~lGl~p~a~I~~~a~a~~~~~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~E~ 342 (520)
T 4egv_A 263 MVARDQVNQGAALLMMSVESARKLGVPEEKWVYLRGHADMKEPKLLERADIGASPASVTAVNEALRVAGIGLDDVAAFDL 342 (520)
T ss_dssp GCC--CCCEEEEEEEEEHHHHHHHTCCGGGCEEEEEEEEEECCCGGGCSCTTCCHHHHHHHHHHHHHHTCCGGGEEEEEE
T ss_pred cccCCCCcceEEEEEeeHHHHHHcCCCCceEEEEEEEeccCCcccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEE
Confidence 456668999999999999999999999998888887654432221 111 12568899999999999999999999999
Q ss_pred cCCCCccCcHHHHHHHHHHHcC----CCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcc-
Q 008146 467 HATSTPAGDIKEYQALIHCFGQ----NRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTN- 541 (576)
Q Consensus 467 Hgtgt~~gD~~E~~Al~~~f~~----~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~- 541 (576)
|..++ ++..+..+.+|- ..++++++.+.++||+++++|+..+++++++|+++..+..++ .+++.+++.
T Consensus 343 ~dAF~-----~~~l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~~~~v~~lr~~~~~~~L~--~~~gg~~~~~ 415 (520)
T 4egv_A 343 YSCFP-----FPVFNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGIAEAVNEMRDKPGQFALV--GANGGIASKY 415 (520)
T ss_dssp CCSSS-----HHHHHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHHHHHHHHHHHSTTCEEEE--EEEETTTTEE
T ss_pred eCCcH-----HHHHHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHHHHHHHHHhcCCCCceEE--eCCCCeeeee
Confidence 98777 455555666663 246889999999999999999999999999999988876665 467777763
Q ss_pred --cccCCcccccC----ccEEEEeccCCCcceeEEEEee
Q 008146 542 --VLVGPKKERLE----VKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 542 --~~~~~~~~~~~----~~~alv~sfG~gG~na~vil~~ 574 (576)
+.+..++.+|+ ++++.+++ +|+|+|+++
T Consensus 416 ~~~~l~~~~~~w~~~~~~~~~~~~~-----~~~~~~~~~ 449 (520)
T 4egv_A 416 SVGIYSTEPADWVADNSAQLQAEHD-----AQPKVAITE 449 (520)
T ss_dssp EEEEEESSCCCCCCCCHHHHHHHHH-----TSCCCCBCS
T ss_pred eEEEEcCCCCCCCCCCCCccccccc-----CCCCccccc
Confidence 22222333333 45555555 889988875
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A | Back alignment and structure |
|---|
Probab=99.94 E-value=3.4e-27 Score=245.17 Aligned_cols=296 Identities=18% Similarity=0.226 Sum_probs=204.0
Q ss_pred CCcEEEEecceecCCC-CCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhh-cCCHHHHHHHH
Q 008146 164 QKRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSK-RMDKFMLYLLT 241 (576)
Q Consensus 164 ~~~IaItGmg~~~P~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~-~mdp~~rl~l~ 241 (576)
|.++.|+|+|+.+|.. .+.+++|+.+.. + +.|.... .-|..+... ..++..+|+++
T Consensus 10 m~~~~I~g~g~~~P~~~~~~~~~~~~~~~--~-----~~~i~~~---------------~gi~~r~~~~~~~~~~~la~~ 67 (335)
T 1u6e_A 10 ARSVGLLSVGAYRPERVVTNDEICQHIDS--S-----DEWIYTR---------------TGIKTRRFAADDESAASMATE 67 (335)
T ss_dssp CSCEEEEEEEEECCSEEEEHHHHTTSSSC--C-----HHHHHHH---------------HCCSEEEECCTTCCHHHHHHH
T ss_pred CCceEEEEEEEECCCceecHHHHHHHhCC--C-----HHHHHHh---------------cCCceEeecCCCCCHHHHHHH
Confidence 5679999999999998 677777753311 0 1110000 002222211 24567899999
Q ss_pred HHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCCC-Ccc
Q 008146 242 AGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM-GPN 320 (576)
Q Consensus 242 aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~ 320 (576)
++++||+|+|+++++++ +|++|+..+++ ..+..+.+++..||++ +|+
T Consensus 68 A~~~al~~ag~~~~~id-------~vi~~t~~~~~-------------------------~~~~~a~~v~~~lgl~~~~~ 115 (335)
T 1u6e_A 68 ACRRALSNAGLSAADID-------GVIVTTNTHFL-------------------------QTPPAAPMVAASLGAKGILG 115 (335)
T ss_dssp HHHHHHHHHTCCGGGCC-------EEEEECSCCCC-------------------------SSSCHHHHHHHHHTCTTSEE
T ss_pred HHHHHHHHcCCCHHHCC-------EEEEEcCCCCC-------------------------CCChHHHHHHHHhCCCCCcE
Confidence 99999999999987555 78998764321 1124688999999998 599
Q ss_pred ccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceE
Q 008146 321 YSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAG 400 (576)
Q Consensus 321 ~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAa 400 (576)
++|+++|+|++.||+.|+++|++|++|.+||+|+|.+.. ..+|+| ..+++++||||+
T Consensus 116 ~~v~~aC~s~~~al~~A~~~i~~g~~~~vLv~g~e~~s~----------------------~~~~~d-~~~~~~~gDGA~ 172 (335)
T 1u6e_A 116 FDLSAGAAGFGYALGAAADMIRGGGAATMLVVGTEKLSP----------------------TIDMYD-RGNCFIFADGAA 172 (335)
T ss_dssp EEEECGGGHHHHHHHHHHHHHHHTSCSSEEEEEEEECGG----------------------GCCTTC-TTTTTTBCEEEE
T ss_pred eeeccccHHHHHHHHHHHHHHHcCCCCEEEEEEEccccc----------------------ccCccc-cccceEeccccE
Confidence 999999999999999999999999999999999998531 123343 358999999999
Q ss_pred EEEEcchHHHHhcCCeeeEEEEEE-EEecCCCCCC--------C-------CCCCh--------HHHHHHHHHHHHHcCC
Q 008146 401 VLLLEELEHAKKRGAKIYAEFRGG-SFTSDAYHMT--------E-------PHPDG--------VGVILCIEKALAHSGV 456 (576)
Q Consensus 401 alvL~~~~~A~~~g~~i~a~I~g~-~~~~dg~~~~--------~-------~~p~~--------~~~~~ai~~AL~~Agl 456 (576)
++||++.+. ++ ++.++.+. +...+..+.. . ...++ ..+.++++++|+++|+
T Consensus 173 A~vl~~~~~---~~--i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl 247 (335)
T 1u6e_A 173 AVVVGETPF---QG--IGPTVAGSDGEQADAIRQDIDWITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDVGRRAMDAAGV 247 (335)
T ss_dssp EEEEEECSS---CC--BCCCEEEECGGGGGGEEESSCHHHHHTSTTSCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEecCC---CC--eeEEEEEEcCCcccceeecCCccCcCCCccCccceEEEcCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999997653 22 44444332 1111111100 0 01122 3667899999999999
Q ss_pred CCCCccEEEecCCCCccCcHHHHHHHHHHHcCCCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCC
Q 008146 457 SREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDA 536 (576)
Q Consensus 457 ~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~ 536 (576)
+++|||||++|+++++..|. +.+.|+-..+-.+...+..+||+.+|+....|.. .++.+.+
T Consensus 248 ~~~dId~~~~H~~~~~~~~~-----~~~~lg~~~~~~~~~~~~~~Gnt~sAs~~~~L~~---~~~~~~~----------- 308 (335)
T 1u6e_A 248 RPDQIDVFVPHQANSRINEL-----LVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAE---LLTTGAA----------- 308 (335)
T ss_dssp CGGGCCEEEECCSCHHHHHH-----HHHHHTCCTTCEECCTHHHHCBCGGGHHHHHHHH---HHHHTSS-----------
T ss_pred CHHHCCEEEECCCCHHHHHH-----HHHHcCCCchhhhhhhhhhhCcHHHHHHHHHHHH---HHHcCCC-----------
Confidence 99999999999999998775 4456664432123334678999999986543322 2222211
Q ss_pred CCCcccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 537 VVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
.+.+.+++++||+|++++++||+-
T Consensus 309 --------------~~g~~~l~~~~G~G~t~~~~vl~~ 332 (335)
T 1u6e_A 309 --------------KPGDLALLIGYGAGLSYAAQVVRM 332 (335)
T ss_dssp --------------CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred --------------CCCCEEEEEEEehhheeEEEEEEe
Confidence 123678899999999999999974
|
| >2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.2e-26 Score=235.38 Aligned_cols=288 Identities=18% Similarity=0.223 Sum_probs=203.4
Q ss_pred cEEEEecceecCCC-CCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 008146 166 RVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 244 (576)
Q Consensus 166 ~IaItGmg~~~P~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa~ 244 (576)
++.|+|+|+.+|.. .+.+++++.+... +.|-. ... . |..+.....++..+|++++++
T Consensus 5 ~~~I~g~g~~~P~~~~~~~~~~~~~~~~-------~~~i~-----~~~----G------i~~R~~~~~~~~~~la~~Aa~ 62 (331)
T 2x3e_A 5 AAVVCGLGSYLPEAVLSNDMLAAELDTS-------DAWIS-----SRT----G------VRQRHIAGDLGSGDLALRAAS 62 (331)
T ss_dssp EEEEEEEEEECCSCEEEHHHHHHHTTCC-------HHHHH-----HHH----C------CCEEECCTTCCHHHHHHHHHH
T ss_pred eeEEEEEEEECCCcEecHHHHHHHhCCC-------HHHHH-----Hhh----C------ceEEEecCCCCHHHHHHHHHH
Confidence 58999999999998 6778888765321 01100 000 0 111111111668899999999
Q ss_pred HHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCCC-Cccccc
Q 008146 245 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM-GPNYSI 323 (576)
Q Consensus 245 eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~~tv 323 (576)
+||+|+|+ ++++ .|++|+..+.+ ..+..+.+++..||++ +|+++|
T Consensus 63 ~al~~ag~--~~id-------~vi~~t~~~~~-------------------------~~p~~a~~v~~~lgl~~~~~~~v 108 (331)
T 2x3e_A 63 AALASAGL--ERVD-------AVVLATSTGDF-------------------------CCPATAPRVAARLGLVGALAFDL 108 (331)
T ss_dssp HHHHHHTC--SCCS-------EEEEECSSCSE-------------------------EESCSHHHHHHHTTCTTSEEEEE
T ss_pred HHHHhCCc--ccCC-------EEEEEeCCCCC-------------------------CCChHHHHHHHHhCCCCCcEEEE
Confidence 99999998 4333 68888764211 1123578999999998 899999
Q ss_pred cCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceEEEE
Q 008146 324 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 403 (576)
Q Consensus 324 ~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAaalv 403 (576)
+++|+|++.||..|+++|++|++|.+||+|+|.+. +. +. |++..+|+++||||+++|
T Consensus 109 ~~aCas~~~Al~~A~~~i~~g~~~~vLv~g~e~~s-~~----------~~------------~~d~~~~~~~GdGA~A~v 165 (331)
T 2x3e_A 109 SAAATGFVYGLASVGSLISAGLADSALLVGVDTFS-HT----------LD------------PADRSTRALFGDGAGAVV 165 (331)
T ss_dssp ECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECGG-GG----------SC------------TTCHHHHHHBCCEEEEEE
T ss_pred cCcChHHHHHHHHHHHHHHcCCCCEEEEEEeeccc-cC----------CC------------ccccccceeeccccEEEE
Confidence 99999999999999999999999999999999842 21 00 122346899999999999
Q ss_pred EcchHHHHhcCCeeeEEEEEEEEecCCC---CCCCCC----------------CCh--------HHHHHHHHHHHHHcCC
Q 008146 404 LEELEHAKKRGAKIYAEFRGGSFTSDAY---HMTEPH----------------PDG--------VGVILCIEKALAHSGV 456 (576)
Q Consensus 404 L~~~~~A~~~g~~i~a~I~g~~~~~dg~---~~~~~~----------------p~~--------~~~~~ai~~AL~~Agl 456 (576)
|++.++| ++..+++. ...+|+. +...|. .++ ..+.++++++|+++|+
T Consensus 166 L~~~~~a--~~~~i~~~----~~~~dg~~~~~~~~p~~~~~~p~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl 239 (331)
T 2x3e_A 166 LRAGDAE--EEGALLAF----DLGSDGHQFDLLMTPAVSRAERSSGQASNYFRMDGKAVFGQAVTQMSDSVRRVLDRVGW 239 (331)
T ss_dssp EEEECTT--STTBEEEE----EEEECGGGTTSEEEECCCHHHHHHTCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEecCCC--CCCceEEE----EEEEcCCCCCeEEecCCCCCCCCccCcCceEEecCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9987654 34455443 3344442 111111 122 5678899999999999
Q ss_pred CCCCccEEEecCCCCccCcHHHHHHHHHHHcCCC-CcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCC
Q 008146 457 SREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPD 535 (576)
Q Consensus 457 ~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~-~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~ 535 (576)
+++|||||++|+++++..|. +.+.++-.. +++ ..+..+||+.+|+..+.|..+ ++++.+.
T Consensus 240 ~~~did~~~~H~~~~~~~d~-----~~~~lg~~~~~~~--~~~~~~Gnt~sAs~~~~L~~~---~~~~~~~--------- 300 (331)
T 2x3e_A 240 QASDLHHLVPHQANTRILAA-----VADQLDLPVERVV--SNIAEVGNTVAASIPLALAHG---LRQGILR--------- 300 (331)
T ss_dssp CGGGCSEEEECCCCHHHHHH-----HHHHHTCCGGGBC--CCHHHHCBCGGGHHHHHHHHH---HHTTCSC---------
T ss_pred CHHHCCEEEEcCCCHHHHHH-----HHHHcCCCHHHHh--hhHhhhCcHHHHHHHHHHHHH---HHhCCCC---------
Confidence 99999999999999998775 556666432 233 245789999999988776544 4444320
Q ss_pred CCCCcccccCCcccccCccEEEEeccCCCcceeEEEEe
Q 008146 536 AVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573 (576)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~ 573 (576)
+.+.++..+||.|.+...++|+
T Consensus 301 ----------------~G~~vll~~~G~G~~~~~~~l~ 322 (331)
T 2x3e_A 301 ----------------DGGNMVLTGFGAGLTWGSVALR 322 (331)
T ss_dssp ----------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred ----------------CCCEEEEEEEeHHhhheeeEEE
Confidence 1356788999999999999986
|
| >1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=3.5e-26 Score=241.90 Aligned_cols=310 Identities=13% Similarity=0.097 Sum_probs=210.8
Q ss_pred EEEEecceecCCC-CCHHHHHHHHHcCCCcceeccCC-----CCCCCCccc-cccccCCCCCCCCChhhhhcCCHHHHHH
Q 008146 167 VVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETF-----DCTSFPTKI-AAEIKSFSTDGWVAPKLSKRMDKFMLYL 239 (576)
Q Consensus 167 IaItGmg~~~P~g-~~~~~~w~~L~~G~~~i~~~~~~-----~~~~~~~~~-~g~v~~fd~~~~i~~~~a~~mdp~~rl~ 239 (576)
+.|+|+|+.+|.. .+.+++|+.+......... ++| ...+...+. ....+.|+..+-+++++....++..+|+
T Consensus 10 ~~I~gig~~~P~~~v~~~~l~~~~~~~~~~~~~-~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~~~r~~~~~~~~~~la 88 (382)
T 1u0m_A 10 ATLCRPSVSVPEHVITMEETLELARRRHTDHPQ-LPLALRLIENTGVRTRHIVQPIEDTLEHPGFEDRNKVYEREAKSRV 88 (382)
T ss_dssp CEECCCEEECCSEEEEHHHHHHHHHHHHTTCTT-HHHHHHHHHHTCCCEEEESSCHHHHTSCCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEeCCCcccCHHHHHHHHHHhccChhh-HHHHHHHHHhcCCCcceeecChhhhccCCChhHHHHHHHHHHHHHH
Confidence 7899999999998 7889999877543100000 000 001111111 1111223222224455555567789999
Q ss_pred HHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCCCC-
Q 008146 240 LTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG- 318 (576)
Q Consensus 240 l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G- 318 (576)
++++++||+|+|+++++|+ .|++++..+ + .....+.+++..||+++
T Consensus 89 ~~Aa~~aL~~agl~~~~id-------~vi~~t~~~---------------------~-----~~p~~a~~v~~~lGl~~~ 135 (382)
T 1u0m_A 89 PAVIQRALDDAELLATDID-------VIIYVSCTG---------------------F-----MMPSLTAWLINEMGFDST 135 (382)
T ss_dssp HHHHHHHHHHHTCCGGGCS-------EEEEECSSS---------------------C-----CSSCHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHHhCCCHHHCC-------EEEEEecCC---------------------C-----CCCcHHHHHHHHhCCCCC
Confidence 9999999999999987555 577776531 1 12245789999999988
Q ss_pred -ccccc-cCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCC----c
Q 008146 319 -PNYSI-STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRD----G 392 (576)
Q Consensus 319 -p~~tv-~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~----G 392 (576)
|+++| +++|+|++.||..|+++|++|.+|.+||+|+|.+. +. .+|+|.+++ +
T Consensus 136 ~~~~~v~~~aCss~~~Al~~A~~~i~~g~~~~vLv~g~e~~s-~~---------------------~~~~d~~~~~~~~~ 193 (382)
T 1u0m_A 136 TRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFCS-LC---------------------YQPTDLGVGSLLCN 193 (382)
T ss_dssp CEEEEECSCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEEGG-GG---------------------CCTTCCSHHHHHHH
T ss_pred cceEEccCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEeccc-hh---------------------cCcccCCHHHhhcc
Confidence 89999 99999999999999999999999999999999842 21 123443333 8
Q ss_pred ceecCceEEEEEcchHHHHhcCCeeeEEEEEEEE--ecCCCC--------------CC--CCCCChHHHHHHHHHHHHHc
Q 008146 393 FVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSF--TSDAYH--------------MT--EPHPDGVGVILCIEKALAHS 454 (576)
Q Consensus 393 ~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~--~~dg~~--------------~~--~~~p~~~~~~~ai~~AL~~A 454 (576)
+++||||+++||++.+. +|. +|.++.. ..++.+ .. .+......+. +++++|+++
T Consensus 194 ~lfGDGA~A~vL~~~~~---~g~----~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~-~i~~aL~~a 265 (382)
T 1u0m_A 194 GLFGDGIAAAVVRGRGG---TGV----RLERNGSYLIPKTEDWIMYDVKATGFHFLLDKRVPATMEPLAP-ALKELAGEH 265 (382)
T ss_dssp HHBCEEEEEEEEETTTC---SEE----EEEEEEEEECSSCTTTEEEEEETTEEEEEECTTTGGGHHHHHH-HHHHHHHTT
T ss_pred chhcCCcEEEEEeccCC---CCc----EEEEeeeEecCChHHhcCceecCCceEEEeCcHHHHHHHHHHH-HHHHHHHHc
Confidence 99999999999997643 333 3455443 333322 00 1112245677 999999999
Q ss_pred CCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCC-Cccc-ccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCC
Q 008146 455 GVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRV-NSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLE 532 (576)
Q Consensus 455 gl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~-~~~v-~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~ 532 (576)
|++++|||||++|++++++.|. +.+.++-.. ++++ ...+..+||+.+|+..+.|..++ +.+.+.
T Consensus 266 gl~~~dId~v~~H~~~~~i~d~-----~~~~lgl~~~k~~~s~~~~~~~Gnt~sAsi~~~L~~~~---~~g~~~------ 331 (382)
T 1u0m_A 266 GWDASDLDFYIVHAGGPRILDD-----LSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLF---DEGGVE------ 331 (382)
T ss_dssp SCCSSCCSCCEEECSHHHHHHH-----HHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHHHHHH---HSCCCC------
T ss_pred CCCHHHCCEEEECCCCHHHHHH-----HHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHH---HhcCCC------
Confidence 9999999999999999987764 445565432 2332 35677899999999877765543 444321
Q ss_pred CCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEe
Q 008146 533 NPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573 (576)
Q Consensus 533 ~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~ 573 (576)
+-+.++..+||.|.+...++|+
T Consensus 332 -------------------~Gd~vll~~~G~G~t~~~~vl~ 353 (382)
T 1u0m_A 332 -------------------EGARGLLAGFGPGITAEMSLGC 353 (382)
T ss_dssp -------------------SSCCCEEEEEETTTEEEEEEEE
T ss_pred -------------------CCCEEEEEEEcccceeEEEEEE
Confidence 1134567899999999988885
|
| >2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=229.91 Aligned_cols=319 Identities=13% Similarity=0.101 Sum_probs=211.8
Q ss_pred CcEEEEecceecCCC-CCHHHHHHHHHcCCCcceeccCC-----CCCCCCccc-cccccCCCCCCC-CChhhhhcC----
Q 008146 165 KRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETF-----DCTSFPTKI-AAEIKSFSTDGW-VAPKLSKRM---- 232 (576)
Q Consensus 165 ~~IaItGmg~~~P~g-~~~~~~w~~L~~G~~~i~~~~~~-----~~~~~~~~~-~g~v~~fd~~~~-i~~~~a~~m---- 232 (576)
.++.|+|+|+.+|.. .+.+++|+.+....+.-.+..+| ...+...+. ...-..||+.+| ++..+...+
T Consensus 12 ~~v~I~g~g~~~P~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (374)
T 2h84_A 12 NNSFVLGIGISVPGEPISQQSLKDSISNDFSDKAETNEKVKRIFEQSQIKTRHLVRDYTKPENSIKFRHLETITDVNNQF 91 (374)
T ss_dssp CCCEEEEEEEECSSSCEEHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCCCEECCSSCTTSGGGCGGGGGGCCHHHHHHHH
T ss_pred CCeEEEEEEEeCCCcccCHHHHHHHHHHhhccChHHHHHHHHHHHhCCcCcceeecCccccccccccCChHHHHHHHHHH
Confidence 358999999999998 67899998875422100000000 001111110 000013444444 344444445
Q ss_pred -CHHHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHH
Q 008146 233 -DKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLA 311 (576)
Q Consensus 233 -dp~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia 311 (576)
++..+|+++++++||+++|+++++|+ +|++|+..+ + .....+.+++
T Consensus 92 ~~~~~~la~~Aa~~al~~ag~~~~~id-------~vi~~t~~~---------------------~-----~~p~~a~~v~ 138 (374)
T 2h84_A 92 KKVVPDLAQQACLRALKDWGGDKGDIT-------HIVSVTSTG---------------------I-----IIPDVNFKLI 138 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSCGGGCC-------EEEEEESSC---------------------C-----CSSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeeCC---------------------C-----CCCcHHHHHH
Confidence 88899999999999999999998665 688887531 1 1123578999
Q ss_pred HHhCCCC--cccccc-CCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCcc
Q 008146 312 MDLGWMG--PNYSIS-TACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDI 388 (576)
Q Consensus 312 ~~lgl~G--p~~tv~-taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~ 388 (576)
..||+++ |++.|+ ++|+|++.||+.|+++|++|.+|.|||+|+|.+.... . .|.|.
T Consensus 139 ~~lGl~~~~~~~~v~~~aCss~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~~-~--------------------~~~dr 197 (374)
T 2h84_A 139 DLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVCSLHF-S--------------------NTDGG 197 (374)
T ss_dssp HHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHTTCTTCEEEEEEEECCGGGC-C--------------------CSSSH
T ss_pred HHcCcCCCCceEEecCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEEecchhh-c--------------------CCCCH
Confidence 9999987 899996 8999999999999999999999999999999853110 0 11121
Q ss_pred C--CCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEec--CCC------------CC--CCCCCC--hHHHHHHHH
Q 008146 389 N--RDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTS--DAY------------HM--TEPHPD--GVGVILCIE 448 (576)
Q Consensus 389 ~--~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~--dg~------------~~--~~~~p~--~~~~~~ai~ 448 (576)
+ .+++++||||+|+||++.+.+..+ .++ +|.+.+... ++. ++ ....+. ...+.++++
T Consensus 198 ~~~~~~~lfGDGA~A~vL~~~~~~~~~--~~~-~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~ 274 (374)
T 2h84_A 198 DQMVASSIFADGSAAYIIGCNPRIEET--PLY-EVMCSINRSFPNTENAMVWDLEKEGWNLGLDASIPIVIGSGIEAFVD 274 (374)
T ss_dssp HHHHHHHHBCCEEEEEEEESSCCTTCC--CCE-EEEEEEEEECSSCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHH
T ss_pred HHHhhhhhhccCcEEEEEecCCCcccC--Cce-eEEeeeeEEeCCCcccceeEEecCcEEEEeCchHHHHHHHHHHHHHH
Confidence 1 148899999999999987655322 244 666655431 111 00 000011 246778999
Q ss_pred HHHHHcC------CCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCC-Ccccc-cccccccccccchhHHHHHHHHHHH
Q 008146 449 KALAHSG------VSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVN-STKSMIGHLLGAAGAVEAIAVVQAI 520 (576)
Q Consensus 449 ~AL~~Ag------l~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~-~~~v~-s~K~~iGH~~gAsG~~~li~~~l~L 520 (576)
++|+++| ++++||||| +|++++++.|. +.+.++-.. +++++ .+...+||+.+|+-.+.|..++
T Consensus 275 ~~L~~ag~~~~~~l~~~did~~-~H~~~~~i~d~-----~~~~lgl~~~k~~~s~~~~~~~Gnt~sasi~~~L~~~~--- 345 (374)
T 2h84_A 275 TLLDKAKLQTSTAISAKDCEFL-IHTGGKSILMN-----IENSLGIDPKQTKNTWDVYHAYGNMSSASVIFVMDHAR--- 345 (374)
T ss_dssp HHHHHHTTTSCSCCCSSSSEEE-ECCCCHHHHHH-----HHHHTTCCGGGGHHHHHHHHHHCBCTTHHHHHHHHHHH---
T ss_pred HHHHhcCCccccCCChhhcCEe-ECCCCHHHHHH-----HHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHH---
Confidence 9999999 999999999 99999987664 444555432 23332 4456789999888766655443
Q ss_pred HcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEeeCC
Q 008146 521 RTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 576 (576)
Q Consensus 521 ~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~~~ 576 (576)
+.+. +-+.++..+||.|-+-..++|+..+
T Consensus 346 ~~~~---------------------------~Gd~vll~~~G~G~t~~~~ll~~~~ 374 (374)
T 2h84_A 346 KSKS---------------------------LPTYSISLAFGPGLAFEGCFLKNVV 374 (374)
T ss_dssp TCSC---------------------------CCSEEEEEEEETTTEEEEEEEEECC
T ss_pred hhcC---------------------------CCCeEEEEEeccchhhhhhhheecC
Confidence 2211 1245677899999999999988653
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} | Back alignment and structure |
|---|
Probab=99.90 E-value=2e-24 Score=254.78 Aligned_cols=330 Identities=12% Similarity=0.061 Sum_probs=222.0
Q ss_pred CCCCcEEEEecceecCCC-CCHHHH------------HHHH------HcCCCcceeccCCCCCCCCccccccccCCCCCC
Q 008146 162 MKQKRVVVTGMGLVSPLG-HEPDVF------------YNNL------LEGVSGISEIETFDCTSFPTKIAAEIKSFSTDG 222 (576)
Q Consensus 162 ~~~~~IaItGmg~~~P~g-~~~~~~------------w~~L------~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~ 222 (576)
+...++.|+|+|..+|.+ .+.+++ |+.+ ..++++|.+...++...+.. ..|++..
T Consensus 599 ~~~~~~~I~g~g~~~P~~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~sGI~~r~~~~~~~~~~------~~~~~~~ 672 (979)
T 3tsy_A 599 RAKGPATILAIGTATPDHCVYQSDYADYYFKVTKSEHMTALKKKFNRICDKSMIKKRYIHLTEEMLE------EHPNIGA 672 (979)
T ss_dssp SCCSCEEEEEEEEECCSCEEEHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTCCCEEECSCCHHHHH------HCHHHHS
T ss_pred cccCCceeecccCCCCCCccCHHHHHHHHHHhccccchHHHHHHHHHHHHhcCcceeeEecChhhhh------cCccccc
Confidence 345679999999999998 444444 4444 34555665543332211100 1122222
Q ss_pred CCC----hhhhhcCCHHHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccc
Q 008146 223 WVA----PKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCV 298 (576)
Q Consensus 223 ~i~----~~~a~~mdp~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~ 298 (576)
++. .++.+.++....|+++|+++||+|||+++++|+ .|+++++.
T Consensus 673 ~~~~~~~~r~~~~~~~~~~la~~Aa~~AL~~agl~~~dId-------~ii~~t~~------------------------- 720 (979)
T 3tsy_A 673 YMAPSLNIRQEIITAEVPKLGKEAALKALKEWGQPKSKIT-------HLVFCTTS------------------------- 720 (979)
T ss_dssp SSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC-------EEEEEESS-------------------------
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCC-------EEEEEeeC-------------------------
Confidence 333 334444455677999999999999999998665 57777632
Q ss_pred cccccchhHHHHHHHhCCCCc---cccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhcc
Q 008146 299 PFATTNMGSAMLAMDLGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR 375 (576)
Q Consensus 299 ~~~~~~~~a~~ia~~lgl~Gp---~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~ 375 (576)
....+..+.+++..||++++ .+.++++|++++.||..|.++|++|.++.|||+|+|.+....
T Consensus 721 -~~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCsg~~~Al~~A~~~i~sG~~~~vLvvg~e~~~~~~-------------- 785 (979)
T 3tsy_A 721 -GVEMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEITVVTF-------------- 785 (979)
T ss_dssp -CCCSSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEECTTTTC--------------
T ss_pred -CCCCCcHHHHHHHHcCCCcccEEEeeeccccHhHHHHHHHHHHHHHhCCCCEEEEEEEEecchhe--------------
Confidence 11223578999999999875 499999999999999999999999999999999999732211
Q ss_pred CCCCCCCCCCCccCCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCC----------------
Q 008146 376 NNDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPD---------------- 439 (576)
Q Consensus 376 ~~~p~~~~rpfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~---------------- 439 (576)
.....+.++...+++++||||+|+||++.+.+..++..++....+.....+..+.....+.
T Consensus 786 ---~~~~~~~~~~~~~~~lfGDGA~A~vL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 862 (979)
T 3tsy_A 786 ---RGPSEDALDSLVGQALFGDGSAAVIVGSDPDISIERPLFQLVSAAQTFIPNSAGAIAGNLREVGLTFHLWPNVPTLI 862 (979)
T ss_dssp ---CCCCSSCHHHHHHHHHBCCEEEEEEEESSCCSSSCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHH
T ss_pred ---eCCCccCHHHHhhhhhccCceEEEEEecCCCccccCcceEEEeeeeEEecCchhheEEEEecCceEEEEchHHHHHH
Confidence 0011122333345789999999999998877666677788777777776665543322211
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCC-Ccccc-cccccccccccchhHHHHHHHH
Q 008146 440 GVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVN-STKSMIGHLLGAAGAVEAIAVV 517 (576)
Q Consensus 440 ~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~-~~~v~-s~K~~iGH~~gAsG~~~li~~~ 517 (576)
...+.++++++|+++|++++||||+++|.+++.+.|.+ .+.++-.. ++..+ ..-..+||+.+|+=.+.|..+.
T Consensus 863 ~~~~~~~~~~al~~agl~~~did~~~~Hq~~~~i~~~~-----~~~lgl~~~k~~~~~~~l~~~GNtssasi~~~L~~~~ 937 (979)
T 3tsy_A 863 SENVEKCLTQAFDPLGISDWNSLFWIAHPGGPAILDAV-----EAKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMR 937 (979)
T ss_dssp HHHHHHHHHHHHGGGTCCCGGGSEEEECCSCHHHHHHH-----HHHHTCCTTTTHHHHHHHHHHCBCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCCCcccceEEECCCChHHHHHH-----HHHcCCChHHHHHHHHHHHHcCCcchhhHHHHHHHHH
Confidence 12367899999999999999999999999998765544 34454321 22211 1245679999999888777765
Q ss_pred HHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEe
Q 008146 518 QAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573 (576)
Q Consensus 518 l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~ 573 (576)
..++.|.. + .........+..+||.|-+.+.++++
T Consensus 938 ~~~~~G~~------------------v---~~g~~~~~~ll~~~G~G~t~~~~~l~ 972 (979)
T 3tsy_A 938 KKSLKGER------------------A---TTGEGLDWGVLFGFGPGLTIETVVLH 972 (979)
T ss_dssp HHHHHTTC------------------S---BTTTTCSEEEEEEECGGGEEEEEEEE
T ss_pred hhhccccc------------------c---cCCCCcceeEEEEeCCchHHHHHHHH
Confidence 55544321 0 00012345677899999898888886
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-21 Score=204.16 Aligned_cols=313 Identities=16% Similarity=0.127 Sum_probs=209.4
Q ss_pred CCCCcEEEEecceecCCC-CCHHHHHHHHHc-----CCCcceeccCCCCCCCCccccccccCCCCCCCCChhhh-hcCCH
Q 008146 162 MKQKRVVVTGMGLVSPLG-HEPDVFYNNLLE-----GVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLS-KRMDK 234 (576)
Q Consensus 162 ~~~~~IaItGmg~~~P~g-~~~~~~w~~L~~-----G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a-~~mdp 234 (576)
|+...|.|+|+|...|.- .+.+++.+.+.. +.+ +.|-.... | |..+.. ..-..
T Consensus 8 m~~~~v~I~~~g~~lP~~~v~n~~l~~~~~~~~~~~~~~-----~~~i~~~t-----G----------i~~R~~~~~~~~ 67 (345)
T 3s21_A 8 MLFQNVSIAGLAHIDAPHTLTSKEINERLQPTYDRLGIK-----TDVLGDVA-----G----------IHARRLWDQDVQ 67 (345)
T ss_dssp GSCSSEEEEEEEEEECSEEEEHHHHHHHHHHHHHHHTCC-----CCHHHHTT-----C----------CSEEEECSSCCC
T ss_pred ceecceEEEEEEEeCCCcEEcHHHHHHHHhhcccccCCC-----HHHHHHhh-----C----------ceeEEECCCCCC
Confidence 445679999999999998 677887776532 211 01100000 0 111110 00123
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
...|+.+|+++||+++|+++++|+ .|++++...+ ...+..+.+++..|
T Consensus 68 ~~~La~~Aa~~al~~ag~~~~~Id-------~vi~~t~~~~-------------------------~~~p~~a~~v~~~l 115 (345)
T 3s21_A 68 ASDAATQAARKALIDANIGIEKIG-------LLINTSVSRD-------------------------YLEPSTASIVSGNL 115 (345)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-------EEEECCSCCS-------------------------CSSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeCCCC-------------------------CCCChHHHHHHHHh
Confidence 578999999999999999998666 6888875411 11234588999999
Q ss_pred CCC--CccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCc
Q 008146 315 GWM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDG 392 (576)
Q Consensus 315 gl~--Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G 392 (576)
|+. +|++.|+++|+|++.||..|+++|++|+++.+||+|+|.+..... +...+.++ +...|++|+.+.++
T Consensus 116 Gl~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~---~~~~~~~~-----~~~~~~~f~~~~~~ 187 (345)
T 3s21_A 116 GVSDHCMTFDVANACLAFINGMDIAARMLERGEIDYALVVDGETANLVYE---KTLERMTS-----PDVTEEEFRNELAA 187 (345)
T ss_dssp TCCTTCEEEECCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCHHHHH---HHHHHHTC-----TTCCHHHHHHHHGG
T ss_pred CCCCCceEEeECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcccchhhc---cccccccC-----Cccchhhhhhhccc
Confidence 995 699999999999999999999999999999999999999654321 12223333 44568899988999
Q ss_pred ceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCC-------CCCCh--------HHHHHHHHHHHHHcCCC
Q 008146 393 FVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTE-------PHPDG--------VGVILCIEKALAHSGVS 457 (576)
Q Consensus 393 ~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~-------~~p~~--------~~~~~ai~~AL~~Agl~ 457 (576)
+++||||+++||++.+... .+. .|.+.....++.+... ...++ ..+.++++++|+++|++
T Consensus 188 ~~~GdGA~A~vl~~~~~~~-~~~----~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~ 262 (345)
T 3s21_A 188 LTLGCGAAAMVMARSELVP-DAP----RYKGGVTRSATEWNKLCRGNLDRMVTDTRLLLIEGIKLAQKTFVAAKQVLGWA 262 (345)
T ss_dssp GGBCCEEEEEEEEEGGGST-TSC----EEEEEEEEECGGGTTC-----------CHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred eeeccceeEEEEecCCCCC-CCc----ceeeeccccCcchhhhccccCcceEEcHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999865321 122 3455555444332111 01111 13447788999999999
Q ss_pred CCCccEEEecCCCCccCcHHHHHHHHHHHcCCCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCC
Q 008146 458 REDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAV 537 (576)
Q Consensus 458 ~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~ 537 (576)
++||||+..|..+..+ .+.+.+.++-...- +...-..+||+.+|+-.+.|..+ ++.|.+.
T Consensus 263 ~~did~~v~Hq~~~~i-----~~~~~~~lgl~~ek-~~~~l~~~GNt~sasi~~~L~~~---~~~g~~~----------- 322 (345)
T 3s21_A 263 VEELDQFVIHQVSRPH-----TAAFVKSFGIDPAK-VMTIFGEHGNIGPASVPIVLSKL---KELGRLK----------- 322 (345)
T ss_dssp GGGCSEEEECCSCHHH-----HHHHHHHHTCCGGG-BCCCHHHHCBCGGGHHHHHHHHH---HHHTCCC-----------
T ss_pred HHHCCEEEeCCCCHHH-----HHHHHHHcCcCHHH-ceeeHhhcCchHHHHHHHHHHHH---HHcCCCC-----------
Confidence 9999999999877764 34455556533211 11233467999999877666553 4444331
Q ss_pred CCcccccCCcccccCccEEEEeccCCCcceeEEEEe
Q 008146 538 VDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573 (576)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~ 573 (576)
+-+..+..+||.|-+...++|+
T Consensus 323 --------------~Gd~vll~~~G~G~t~~~~~l~ 344 (345)
T 3s21_A 323 --------------KGDRIALLGIGSGLNCSMAEVV 344 (345)
T ss_dssp --------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred --------------CCCEEEEEEEChhhhheEEEEE
Confidence 1235677899999998888875
|
| >1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A | Back alignment and structure |
|---|
Probab=99.88 E-value=3.1e-22 Score=212.41 Aligned_cols=253 Identities=13% Similarity=0.129 Sum_probs=181.3
Q ss_pred HHHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHH
Q 008146 234 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 313 (576)
Q Consensus 234 p~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~ 313 (576)
....|+.+++++||+++|+++++|+ .|++++... + .....+.+++..
T Consensus 112 ~~~~la~~Aa~~aL~~agl~~~~Id-------~vi~~t~~~---------------------~-----~~p~~a~~v~~~ 158 (393)
T 1ted_A 112 HAVPLAVDVSKRALAGLPYRAAEIG-------LLVLATSTG---------------------F-----IAPGVDVAIVKE 158 (393)
T ss_dssp HHHHHHHHHHHHHHTTCCCCGGGEE-------EEEEEESSC---------------------C-----CSSCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEEeCC---------------------C-----ccChHHHHHHHH
Confidence 5678999999999999999987555 567776531 1 122457899999
Q ss_pred hCCCCc--cccc-cCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCC
Q 008146 314 LGWMGP--NYSI-STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINR 390 (576)
Q Consensus 314 lgl~Gp--~~tv-~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~ 390 (576)
||+.++ .+.+ +++|+|++.||..|+++|++|.+|.+||+|+|.+.... . |+.++
T Consensus 159 lGl~~~~~~~~v~~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~s~~~-----------~------------~~~~r 215 (393)
T 1ted_A 159 LGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCSVNA-----------V------------FADDI 215 (393)
T ss_dssp HTCCTTCEEEEEESCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEECGGGC-----------C------------CCSSH
T ss_pred cCcCCCcceeEeccchhHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccC-----------C------------CCCCH
Confidence 999875 5787 99999999999999999999999999999999854210 0 33344
Q ss_pred C----cceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEe--cCCCCC--------------CC--CCCChHHHHHHHH
Q 008146 391 D----GFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFT--SDAYHM--------------TE--PHPDGVGVILCIE 448 (576)
Q Consensus 391 ~----G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~--~dg~~~--------------~~--~~p~~~~~~~ai~ 448 (576)
+ ++++||||+|+||++.+.+..++. .+++|.+++.. .|+... .. +......+.++++
T Consensus 216 ~~~~~~~lfGDGA~A~vL~~~~~~~~~~~-~~~~i~~~~~~~~~d~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~ 294 (393)
T 1ted_A 216 NDVVIHSLFGDGCAALVIGASQVQEKLEP-GKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVT 294 (393)
T ss_dssp HHHHHHHHBCEEEEEEEEEEECTTSCCCT-TCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHH
T ss_pred HHhhhhhhhcCccEEEEEecCCCccccCc-ceeeeeccceEEcCCchhhccceecCCCeEEecCchHHHHHHHHHHHHHH
Confidence 4 899999999999998764422333 56678887544 555321 00 1112346778999
Q ss_pred HHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCC-Cccc-ccccccccccccchhHHHHHHHHHHHHcCCCC
Q 008146 449 KALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRV-NSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIH 526 (576)
Q Consensus 449 ~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~-~~~v-~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ip 526 (576)
++|+++|++++|||||+.|.+++.+.|.+| +.++-.. ++.+ ......+||+.+|+-.+.|..+ ++.+.+
T Consensus 295 ~aL~~agl~~~dId~~~~H~~~~~i~d~~~-----~~lgl~~~k~~~s~~~~~~~GNt~sAsi~~~L~~~---~~~g~~- 365 (393)
T 1ted_A 295 EMLWDNGLQISDIDLWAIHPGGPKIIEQSV-----RSLGISAELAAQSWDVLARFGNMLSVSLIFVLETM---VQQAES- 365 (393)
T ss_dssp HHHHHTTCCGGGCSCEEECCSCHHHHHHHH-----HHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHHH---HHSCSS-
T ss_pred HHHHHcCCCHhHCCEEEECCCcHHHHHHHH-----HHcCCCHHHHHHHHHHHHhhCCchHhHHHHHHHHH---HhcCcc-
Confidence 999999999999999999999998776543 4455331 2222 2456678999888866544332 344322
Q ss_pred CCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEeeC
Q 008146 527 PNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 527 p~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~~ 575 (576)
. .+-+.++..+||.|.+...++|+-.
T Consensus 366 ---------------------~--~~Gd~vll~~~G~G~t~~~~~l~~~ 391 (393)
T 1ted_A 366 ---------------------A--KAISTGVAFAFGPGVTVEGMLFDII 391 (393)
T ss_dssp ---------------------S--SSSEEEEEEEEETTTEEEEEEEEEC
T ss_pred ---------------------C--CCCCeEEEEEeccchhhhhhheeec
Confidence 0 0235678889999999999998754
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.86 E-value=3e-21 Score=200.27 Aligned_cols=293 Identities=16% Similarity=0.238 Sum_probs=196.5
Q ss_pred cEEEEecceecCCC-CCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhh-hhcCCHHHHHHHHHH
Q 008146 166 RVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKL-SKRMDKFMLYLLTAG 243 (576)
Q Consensus 166 ~IaItGmg~~~P~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~-a~~mdp~~rl~l~aa 243 (576)
+|.|+|+|+.+|.. .+.+++|+.+.+.. +...+.|-.. +. + |..+. ...-.+...|+.+++
T Consensus 11 ~v~I~g~g~~lP~~~v~~~~l~~~l~~~~--~~~~~~~i~~----rt-g----------i~~r~~~~~~~~~~~la~~Aa 73 (333)
T 4dfe_A 11 YSRVLGTGSYLPPNRVTNQDLAKRLAEQG--IETSDEWIVA----RT-G----------IHARYFAEPDVTTSDLAFIAS 73 (333)
T ss_dssp EEEEEEEEEECCSEEEEHHHHHHHHC-----CCCCHHHHHH----HH-C----------CSEEEECCTTCCHHHHHHHHH
T ss_pred ceEEEEEEEECCCcEEcHHHHHHHhcccc--CCCCHHHhHH----hc-C----------ceEEEEcCCCCCHHHHHHHHH
Confidence 69999999999997 78999999874411 1100111000 00 0 11110 001134678999999
Q ss_pred HHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCC--CCccc
Q 008146 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGW--MGPNY 321 (576)
Q Consensus 244 ~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~~ 321 (576)
++||+++|+++++|+ .|++++..+. ...+..+.+++..||+ ++|++
T Consensus 74 ~~al~~ag~~~~~Id-------~vi~~t~~~~-------------------------~~~p~~a~~v~~~lgl~~~~~~~ 121 (333)
T 4dfe_A 74 QRAIEAADIDPQSID-------LIIVATSTPD-------------------------FVFPSTACLLQNKLGIRNHGAAF 121 (333)
T ss_dssp HHHHHHHTCCGGGCC-------EEEEECSSCS-------------------------SSBSCHHHHHHHHTTCCSCCEEE
T ss_pred HHHHHHcCCCHHHCC-------EEEEEeCCCC-------------------------CCCCcHHHHHHHHhCCCCCCcEE
Confidence 999999999998665 6888876421 1123458899999999 67999
Q ss_pred cccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceEE
Q 008146 322 SISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGV 401 (576)
Q Consensus 322 tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAaa 401 (576)
+|+++|+|++.||+.|+++|++|.++.+||+|+|.+.... . |+++..++++||||+|
T Consensus 122 ~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~-----------~------------~~d~~~~~lfGDGA~A 178 (333)
T 4dfe_A 122 DVQAVCSGFAYAVATADSFIRSGQHRTALVIGAETFSRIL-----------D------------FKDRTTCVLFGDGAGA 178 (333)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGGC-----------C------------TTCTTTTTTBCEEEEE
T ss_pred EeCcccHHHHHHHHHHHHHHHcCCCCEEEEEEeecccccc-----------C------------cccccceeeeccccEE
Confidence 9999999999999999999999999999999999853221 0 2333467899999999
Q ss_pred EEEcchHHHHhcCCeeeEEEEEEEEecCCCC---CCCC--------------CCC--------hHHHHHHHHHHHHHcCC
Q 008146 402 LLLEELEHAKKRGAKIYAEFRGGSFTSDAYH---MTEP--------------HPD--------GVGVILCIEKALAHSGV 456 (576)
Q Consensus 402 lvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~---~~~~--------------~p~--------~~~~~~ai~~AL~~Agl 456 (576)
+||++.+ +..+ .++...+++.. ...+ ..+ ...+.++++++|+++|+
T Consensus 179 ~vl~~~~-----~~~i----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl 249 (333)
T 4dfe_A 179 VILQASD-----EPGV----LASALHADGSHSNILCTPGNVNGGVVSGSAFLHMDGQAVFKLAVNVLEKVAVEALEKANL 249 (333)
T ss_dssp EEEEEES-----SCSE----EEEEEEECGGGGGGEEBCEEEETTEEEECCSCEECHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEEEcC-----CCCe----EEEEEEEccCCcCeEEECCCCCCcccccCcceeeccHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999754 1222 33333333321 0000 011 14567889999999999
Q ss_pred CCCCccEEEecCCCCccCcHHHHHHHHHHHcCCCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCC
Q 008146 457 SREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDA 536 (576)
Q Consensus 457 ~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~ 536 (576)
+++|||||..|..+..+ .+++.+.++-... .+......+||+.+|+=.+.|.. .++.|.+.
T Consensus 250 ~~~did~~~~Hq~~~~i-----~~~~~~~lgl~~~-~~~~~l~~~GNt~sasi~~~L~~---~~~~g~~~---------- 310 (333)
T 4dfe_A 250 SAEQIDWLIPHQANIRI-----MQSTCRKLGLPQE-RMIVTVGEHGNTSAASIPLALDV---AVRDGRIK---------- 310 (333)
T ss_dssp CGGGCSEEEECCSCHHH-----HHHHHHHTTCCGG-GBCCCHHHHCBCGGGHHHHHHHH---HHHTTCSC----------
T ss_pred CHHHCCEEEEcCCCHHH-----HHHHHHHhCCCHH-HhhhhHHhcCchHHHHHHHHHHH---HHHcCCCC----------
Confidence 99999999999887764 3455555654321 12224456899998876555543 34444331
Q ss_pred CCCcccccCCcccccCccEEEEeccCCCcceeEEEEe
Q 008146 537 VVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573 (576)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~ 573 (576)
+-...+..+||.|-+..+++++
T Consensus 311 ---------------~Gd~vll~~~G~G~t~~~~ll~ 332 (333)
T 4dfe_A 311 ---------------RGQNVLIEGVGGGFTWGASVIR 332 (333)
T ss_dssp ---------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred ---------------CCCEEEEEEEchhheeEEEEEE
Confidence 1234666789999999998886
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.77 E-value=7.3e-17 Score=170.52 Aligned_cols=247 Identities=14% Similarity=0.123 Sum_probs=164.9
Q ss_pred CHHHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHH
Q 008146 233 DKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAM 312 (576)
Q Consensus 233 dp~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~ 312 (576)
.....|+.+|+++||+++|+++++|+ .|++++...+ ...+..+.+++.
T Consensus 115 ~~~~~La~~Aa~~AL~~agi~~~dId-------~vi~~t~t~~-------------------------~~~p~~a~~v~~ 162 (392)
T 3led_A 115 SILAEMAVTAAEQAIERWGKPRERIG-------AVLCACSNMQ-------------------------RAYPAMAIEVQN 162 (392)
T ss_dssp CHHHHHHHHHHHHHHHHHCSCGGGEE-------EEEEESSCCS-------------------------CSBSCHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCCC-------------------------CCccHHHHHHHH
Confidence 34678999999999999999998666 6888875421 112346788999
Q ss_pred HhCCCCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCc
Q 008146 313 DLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDG 392 (576)
Q Consensus 313 ~lgl~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G 392 (576)
.||++.|++.|+.+|+|++.||..|.++|++|.++.|||+|+|.+... +. |.+....
T Consensus 163 ~LGl~~~~~dv~~aC~g~~~aL~~A~~~i~~g~~~~vLvvg~E~~S~~-----------~d------------~~dr~t~ 219 (392)
T 3led_A 163 ALGLGGFAFDMNVACSSATFGLKTAADFVGGGSVDAVLMVNPEICSGH-----------LN------------FRDRDSH 219 (392)
T ss_dssp HTTCCSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGG-----------CC------------TTCTTTT
T ss_pred HhCCCCeEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEeehhcCCc-----------CC------------cCcccCC
Confidence 999988999999999999999999999999999999999999984211 00 1112346
Q ss_pred ceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCC----------C----------CCCChH--------HHH
Q 008146 393 FVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMT----------E----------PHPDGV--------GVI 444 (576)
Q Consensus 393 ~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~----------~----------~~p~~~--------~~~ 444 (576)
+++||||+|+||++.+.. . ....|.++...+++.... . ...++. .+.
T Consensus 220 ~lFGDGA~A~vl~~~~~~----~-~~~~i~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~ 294 (392)
T 3led_A 220 FIFGDVATAAIVERADDA----Q-GGWSILGTKLKTQFSNNIRNNAGFLNRAWPEGRDKADKLFVQQGRKVFKEVVPLVS 294 (392)
T ss_dssp TTBCEEEEEEEEEEGGGC----C-SSEEEEEEEEEECCCSSEEBCCSGGGGGSGGGTTSGGGSCEECHHHHHHHHHHHHH
T ss_pred cccccccEEEEEEecCCC----C-CCCeEEEEEEEEccccccccCCCcccCCCccccccccceEEechHHHHHHHHHHHH
Confidence 889999999999975421 0 112344444433322100 0 000121 234
Q ss_pred HHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHH-HcCC-CCcccccccccccccccchhHHHHHHHHHHHHc
Q 008146 445 LCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHC-FGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRT 522 (576)
Q Consensus 445 ~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~-f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~ 522 (576)
.+++++|+++|++++|||++..|-.+..+ .+++.+. ++-. ..-.+...-..+||+.+|+=.+.|-. + .
T Consensus 295 ~~i~~~L~~~gl~~~dId~~v~Hqan~~i-----~~~~~~~llgl~~~~~k~~~~l~~~GNtssAsipl~L~~----~-~ 364 (392)
T 3led_A 295 EMIIEHAREIGIDPHGLKRMWLHQANINM-----NEIIGRKVLGRDPTRDENVIILDDYANTSSAGSIIAFHK----H-Q 364 (392)
T ss_dssp HHHHHHHHHTTCCGGGCSEEEECSSCHHH-----HHHHHHHHHTSCCCTTTBCCCHHHHCBCGGGHHHHHHHH----C-C
T ss_pred HHHHHHHHHcCCCHHHCcEEEEcCCCHHH-----HHHHHHHhcCCCCCHHHHHHHHhhhCccHHHHHHHHHHH----H-h
Confidence 67899999999999999999999766543 3344443 3521 11112223345799987764433322 1 1
Q ss_pred CCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 523 GWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 523 g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
+.+ .+-..++..+||.|-+-.+++|+.
T Consensus 365 ~~~-------------------------~~Gd~vll~gfG~G~t~~~~ll~~ 391 (392)
T 3led_A 365 DDM-------------------------AQGDLGLICSFGAGYSAGTVFVQK 391 (392)
T ss_dssp TTC-------------------------CTTCEEEEEEEETTTEEEEEEEEE
T ss_pred CCC-------------------------CCCCEEEEEEEChhhEeEEEEEEE
Confidence 111 012456778999999999999874
|
| >3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A | Back alignment and structure |
|---|
Probab=99.75 E-value=5.5e-17 Score=170.13 Aligned_cols=298 Identities=15% Similarity=0.136 Sum_probs=187.9
Q ss_pred CCCCCCCcEEEEecceecCCC-CCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHH
Q 008146 159 KPHMKQKRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFML 237 (576)
Q Consensus 159 ~~~~~~~~IaItGmg~~~P~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~r 237 (576)
.|.++.+.+.|+|+|...|.- .+.+++.+.+. +.+ ...+. ...+...+ .+..+ -.....
T Consensus 23 ~~~~~~~~v~I~gig~~lP~~~v~n~~l~~~~~-~~~-~~~i~--~~tGI~~R-----------~~a~~-----~~~~~~ 82 (365)
T 3gwa_A 23 TPAAHPPRAAIADIAGHLPEQVLTNDVLAQLYP-DWP-AEKIL--AKTGIRER-----------RIAAP-----RETAAD 82 (365)
T ss_dssp ------CEEEEEEEEEECCSEEEEHHHHHHHCT-TCC-HHHHH--HHHCCCEE-----------EECCT-----TCCHHH
T ss_pred CccceeccEEEEEEEEeCCCcEEcHHHHHHHcc-CCC-HHHHH--HhcCccEE-----------EECCC-----CCCHHH
Confidence 345667789999999999997 67777766541 110 00000 00000000 00011 112568
Q ss_pred HHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCCC
Q 008146 238 YLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM 317 (576)
Q Consensus 238 l~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~ 317 (576)
|+.+|+++||+++|+++++|+ .|++++...+ ...+..+.+++..+|+.
T Consensus 83 La~~Aa~~aL~~ag~~~~~Id-------~vi~~t~~~~-------------------------~~~p~~a~~v~~~lGl~ 130 (365)
T 3gwa_A 83 LAYEAARKLFAQGAVGADQVD-------FVILCTQAPD-------------------------YVLPTSACMLQHRLGIP 130 (365)
T ss_dssp HHHHHHHHHHHTTSCCGGGCC-------EEEEEESSCS-------------------------CSBSCHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHcCCCHHHCC-------EEEEEeCCCC-------------------------CCCCcHHHHHHHHcCCC
Confidence 999999999999999998666 6888875421 11233578999999997
Q ss_pred --CccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCccee
Q 008146 318 --GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVM 395 (576)
Q Consensus 318 --Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~ 395 (576)
.|.+.|+.+|+|++.||..|.++|++|.++.+||+|+|.+..... + ++....+++
T Consensus 131 ~~~~~~~v~~~C~s~~~Al~~A~~~i~~g~~~~vLvvg~e~~s~~~~----------------~-------~dr~~~~lf 187 (365)
T 3gwa_A 131 THAGALDVNLGCSGYVYGLSLAKGLVETGAARCVLLLTADTYSKYLH----------------P-------LDKSVRTLF 187 (365)
T ss_dssp TTSEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGGSC----------------T-------TCHHHHTTB
T ss_pred CCceEEEecccChHHHHHHHHHHHHHHcCCCCEEEEEEEchhhccCC----------------c-------ccccccccc
Confidence 689999999999999999999999999999999999998543210 1 011134679
Q ss_pred cCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCC------------CCCCC----------------CC----C----
Q 008146 396 GEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAY------------HMTEP----------------HP----D---- 439 (576)
Q Consensus 396 gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~------------~~~~~----------------~p----~---- 439 (576)
||||+|+||++.+.. ...+. .+...+++. ..... .. +
T Consensus 188 GDGAaA~vl~~~~~~---~~~i~----~~~~~s~g~~~~~~~~~~gg~~~p~~~~~~~~~~~~~~~~~~~~~~~m~g~~v 260 (365)
T 3gwa_A 188 GDGASATAVIAEHGE---LERIG----PFVFGTDGRGAPNLIVKAGLFREPKSADSAREHEDASGNVRTDEHLYMNGAEV 260 (365)
T ss_dssp CCEEEEEEEEEECSS---SCSEE----EEEEEECGGGGGGEEECSSSSSSCCCTGGGCCEECTTSCEECTTSEEECHHHH
T ss_pred cceeEEEEEEecCCC---CCceE----EEEEEEcCCCCCeEEecCCCcCCCCcccccccccccccccccccceEeccHHH
Confidence 999999999974321 01122 222222211 00000 00 1
Q ss_pred ----hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCC-CcccccccccccccccchhHHHHH
Q 008146 440 ----GVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAI 514 (576)
Q Consensus 440 ----~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~-~~~v~s~K~~iGH~~gAsG~~~li 514 (576)
...+.++++++|+++|++++|||++..|-.+..+ .+.+.+.++-.. ++. ..-..+||+.+|+=.+.|.
T Consensus 261 ~~~~~~~~~~~i~~~L~~~gl~~~did~~v~Hq~n~~i-----~~~~~~~Lgl~~ek~~--~~l~~~GNtssAsipl~L~ 333 (365)
T 3gwa_A 261 MAFSLAEVPRAADRLLALAGEPRENIDCFVLHQANRFM-----LDALRKKMKIPEHKFP--VLMEHCGNTVSSTLPLALE 333 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHH-----HHHHHHHHTCCGGGSC--CCCTTTCBCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH-----HHHHHHHhCCCHHHHH--HHHhcccchHHHHHHHHHH
Confidence 1234578899999999999999999999766543 455566666432 222 2335689999887655443
Q ss_pred HHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEe
Q 008146 515 AVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573 (576)
Q Consensus 515 ~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~ 573 (576)
. .++.|.+. +-...+..+||.|-+-+++|++
T Consensus 334 ~---~~~~g~~~-------------------------~Gd~vll~~fG~G~t~~~~ll~ 364 (365)
T 3gwa_A 334 T---MRANGTLA-------------------------RGMRLMLLGFGVGYSWAGCLVN 364 (365)
T ss_dssp H---HHHTTCCC-------------------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred H---HHHcCCCC-------------------------CCCEEEEEEEehhheeEEEEEE
Confidence 3 34544331 1245677899999999998886
|
| >1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=2.3e-17 Score=174.95 Aligned_cols=216 Identities=15% Similarity=0.155 Sum_probs=149.3
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
...|+..|+.+||++ +++++|+ .|++|+..+. ......+..++..|
T Consensus 51 ~~~la~~Aa~~aL~~--~~~~~Id-------~li~~t~~~~-------------------------~~~p~~a~~v~~~l 96 (396)
T 1xpm_A 51 IVSMGANAAKDIITD--EDKKKIG-------MVIVATESAV-------------------------DAAKAAAVQIHNLL 96 (396)
T ss_dssp HHHHHHHHHHTTCCH--HHHHHEE-------EEEEECSSCS-------------------------BSSSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhc--CCHHHCC-------EEEEEeCCCC-------------------------CCCCCHHHHHHHHh
Confidence 567999999999987 5555333 4666765421 11234678999999
Q ss_pred CCC--CccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCc
Q 008146 315 GWM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDG 392 (576)
Q Consensus 315 gl~--Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G 392 (576)
|+. .|++.|+++|+|++.||..|.++|++|.++.+||+|+|. . ... ++ .+++
T Consensus 97 Gl~~~~~~~~v~~aC~sg~~Al~~A~~~I~sg~~~~vLvvg~e~-s-~~~-----------------------~~-~~~~ 150 (396)
T 1xpm_A 97 GIQPFARCFEMKEACYAATPAIQLAKDYLATRPNEKVLVIATDT-A-RYG-----------------------LN-SGGE 150 (396)
T ss_dssp TCCSSCEEEEEESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEE-E-CCC-----------------------TT-CSSG
T ss_pred CCCCCceEEEeccccHHHHHHHHHHHHHHHcCCCCEEEEEeehh-h-ccc-----------------------cC-CCCC
Confidence 997 499999999999999999999999999999999999996 2 110 11 1368
Q ss_pred ceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEec-CCCCCCCCCC------ChHH--------HHHHHHHHHHHcCCC
Q 008146 393 FVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTS-DAYHMTEPHP------DGVG--------VILCIEKALAHSGVS 457 (576)
Q Consensus 393 ~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~-dg~~~~~~~p------~~~~--------~~~ai~~AL~~Agl~ 457 (576)
+++||||+|+||++. ..++....+.+... +..+...|.+ ++.. +.++++++|+++|++
T Consensus 151 ~~~GdGA~A~vl~~~-------~~i~~~~~~~g~~~~d~~~~~~p~~~~~~~~~G~~~~~~~~~~~~~~~~~~L~~agl~ 223 (396)
T 1xpm_A 151 PTQGAGAVAMVIAHN-------PSILALNEDAVAYTEDVYDFWRPTGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQGKS 223 (396)
T ss_dssp GGCEEEEEEEEEEES-------CSSEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred cccccceEEEEeccC-------CceEEEEeccccccceEEEeeccCCCCCeEEEcHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999863 24555554433322 4333222222 4443 678999999999999
Q ss_pred CCCccEEEecCCCCccCcHHHHHHHHHHHcCC-CCc-----ccccccccccccccchhHHHHHHHH
Q 008146 458 REDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGL-----RVNSTKSMIGHLLGAAGAVEAIAVV 517 (576)
Q Consensus 458 ~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~-~~~-----~v~s~K~~iGH~~gAsG~~~li~~~ 517 (576)
++|||||..|.+++++.|......+....+-. ..+ +-......+||+.+|+-.+.|..++
T Consensus 224 ~~did~~~~H~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~s~~~~~~~GN~~saSi~l~L~~~l 289 (396)
T 1xpm_A 224 LADFASLCFHVPFTKMGKKALESIIDNADETTQERLRSGYEDAVDYNRYVGNIYTGSLYLSLISLL 289 (396)
T ss_dssp GGGCSEEEECCSSHHHHHHHHHTTGGGSCHHHHHHHHHHHHHHTTGGGGTCCCGGGHHHHHHHHHH
T ss_pred HHHCCEEEecCCchHHHHHHHHHHHhhcccCCHHHHHHHhhhhhhhhhhcCchHHHHHHHHHHHHH
Confidence 99999999999999987766432211000000 000 1122246789999998777766554
|
| >3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A | Back alignment and structure |
|---|
Probab=99.74 E-value=2.8e-17 Score=173.80 Aligned_cols=266 Identities=13% Similarity=0.094 Sum_probs=177.8
Q ss_pred CChhhhhcCCHHHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCcccccccc
Q 008146 224 VAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATT 303 (576)
Q Consensus 224 i~~~~a~~mdp~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 303 (576)
+..++...+.....|+.+|+++||+++|+++++|+ .|++++..+ ...
T Consensus 87 ~~~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~~Id-------~li~~t~~~--------------------------~~~ 133 (387)
T 3a5r_A 87 LNVRHKMQVKGVAELGKEAALKAIKEWGQPKSKIT-------HLIVCCLAG--------------------------VDM 133 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC-------EEEEEESSC--------------------------CEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCC--------------------------CCC
Confidence 44555556677889999999999999999998665 577776531 112
Q ss_pred chhHHHHHHHhCCCCc---cccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCC
Q 008146 304 NMGSAMLAMDLGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPT 380 (576)
Q Consensus 304 ~~~a~~ia~~lgl~Gp---~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~ 380 (576)
+..+.+++..||+.++ .+.|+.+|+|++.||..|.++|++|.++.|||+|+|.+...
T Consensus 134 p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~-------------------- 193 (387)
T 3a5r_A 134 PGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVCSEMTTTC-------------------- 193 (387)
T ss_dssp SCHHHHHHHHTTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECCTTT--------------------
T ss_pred CcHHHHHHHHcCcCCCcceeeeEccccHHHHHHHHHHHHHHHhCCCCEEEEEEEeccchh--------------------
Confidence 3467899999999875 78999999999999999999999999999999999984321
Q ss_pred CCCCCCc----cCCCcceecCceEEEEEcchHHHHhcC-CeeeEEEEEEEEecCCCCCC-------C------CCCC---
Q 008146 381 KASRPWD----INRDGFVMGEGAGVLLLEELEHAKKRG-AKIYAEFRGGSFTSDAYHMT-------E------PHPD--- 439 (576)
Q Consensus 381 ~~~rpfd----~~~~G~v~gEGAaalvL~~~~~A~~~g-~~i~a~I~g~~~~~dg~~~~-------~------~~p~--- 439 (576)
...|+| ....++++||||+|+||++.+.. + .....++.+.+......... . ....
T Consensus 194 -~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~ 269 (387)
T 3a5r_A 194 -FRGPSETHLDSMIGQAILGDGAAAVIVGADPDL---TVERPIFELVSTAQTIVPESHGAIEGHLLESGLSFHLYKTVPT 269 (387)
T ss_dssp -CCCCCSSCCSSTTHHHHBCCEEEEEEEESSCCT---TTCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHH
T ss_pred -hcCCCccchhhccccceeccceeEEEEecCCCc---cccCCceEEEeeeEEEeCCChHhcCceEcCCCeEEEecchHHH
Confidence 012232 23367899999999999875421 2 11123455443321111000 0 0011
Q ss_pred --hHHHHHHHHHHHHHcCCC-CCCccEEEecCCCCccCcHHHHHHHHHHHcCCC-Ccccc-cccccccccccchhHHHHH
Q 008146 440 --GVGVILCIEKALAHSGVS-REDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVN-STKSMIGHLLGAAGAVEAI 514 (576)
Q Consensus 440 --~~~~~~ai~~AL~~Agl~-~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~-~~~v~-s~K~~iGH~~gAsG~~~li 514 (576)
...+..+++++|+++|++ .+|| ++..|..+..+.| ++.+.++-.. ++..+ .+...+||+.+|+-.+.|.
T Consensus 270 ~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i~~-----~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~ 343 (387)
T 3a5r_A 270 LISNNIKTCLSDAFTPLNISDWNSL-FWIAHPGGPAILD-----QVTAKVGLEKEKLKVTRQVLKDYGNMSSATVFFIMD 343 (387)
T ss_dssp HHHHHHHHHHHHHHGGGTCCCGGGS-EEEECCSCHHHHH-----HHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCChhhe-eEEECCCCHHHHH-----HHHHHcCCChHHhHHHHHHHHhcCCcchhHHHHHHH
Confidence 234567899999999998 8899 8999988765433 3455565332 22221 3456789999999887776
Q ss_pred HHHHHH-HcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 515 AVVQAI-RTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 515 ~~~l~L-~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
.++..= +.|.+.| ++ .....+..+||.|-+..+++|+-
T Consensus 344 ~~~~~g~~~G~~~~-----------------G~-----~~d~vll~~fG~G~t~~~~ll~~ 382 (387)
T 3a5r_A 344 EMRKKSLENGQATT-----------------GE-----GLEWGVLFGFGPGITVETVVLRS 382 (387)
T ss_dssp HHHHHHHHTTCSBT-----------------TT-----TCSEEEEEEEETTTEEEEEEEEE
T ss_pred HHHHhccccCCCCC-----------------CC-----CcceEEEEEecCcceeeehhhee
Confidence 655432 1111100 00 11457778999998888888863
|
| >1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A | Back alignment and structure |
|---|
Probab=99.73 E-value=6.7e-17 Score=172.20 Aligned_cols=267 Identities=13% Similarity=0.111 Sum_probs=178.8
Q ss_pred hhhhcCCHHHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchh
Q 008146 227 KLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMG 306 (576)
Q Consensus 227 ~~a~~mdp~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 306 (576)
+....++....|+.+|+++||+++|+++++|+ .|++++..+ ...+..
T Consensus 117 r~~~~~~~~~~La~~Aa~~AL~~agl~~~~Id-------~li~~t~~~--------------------------~~~p~~ 163 (413)
T 1xes_A 117 RQAMLAMEVPRLAKEAAEKAIQEWGQSKSGIT-------HLIFCSTTT--------------------------PDLPGA 163 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC-------EEEEEESCC--------------------------CEESCH
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEEeCC--------------------------CccchH
Confidence 44445567889999999999999999998665 678887531 112235
Q ss_pred HHHHHHHhCCCCc---cccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCC
Q 008146 307 SAMLAMDLGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKAS 383 (576)
Q Consensus 307 a~~ia~~lgl~Gp---~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~ 383 (576)
+.+++..||+.++ .+.|+.+|+|++.||..|.++|++|.+|.|||+|+|.+.... .+|..
T Consensus 164 a~~v~~~lGl~~~~~~~~~v~~aCas~~~AL~~A~~~i~~G~~~~vLvvg~E~~s~~~---------------~~~~d-- 226 (413)
T 1xes_A 164 DFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTF---------------RGPSE-- 226 (413)
T ss_dssp HHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCCEEEEEEECTTTTC---------------CCCCT--
T ss_pred HHHHHHHcCcCCccchhceecCccHHHHHHHHHHHHHHHcCCCCEEEEEEehhhhhhh---------------cCCCc--
Confidence 7899999999874 789999999999999999999999999999999999853211 01211
Q ss_pred CCCccCCCcceecCceEEEEEcchHHHHhcCC-eeeEEEEEEEEecCCC--C--------------CCCCCC--ChHHHH
Q 008146 384 RPWDINRDGFVMGEGAGVLLLEELEHAKKRGA-KIYAEFRGGSFTSDAY--H--------------MTEPHP--DGVGVI 444 (576)
Q Consensus 384 rpfd~~~~G~v~gEGAaalvL~~~~~A~~~g~-~i~a~I~g~~~~~dg~--~--------------~~~~~p--~~~~~~ 444 (576)
++|+....++++||||+|+||++.+. .+. ....++.+.+...... . +....+ ....+.
T Consensus 227 ~~~~~~~~~~lfGDGA~A~vl~~~~~---~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~ 303 (413)
T 1xes_A 227 THLDSLVGQALFGDGASALIVGADPI---PQVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIE 303 (413)
T ss_dssp TCHHHHHHHHHBCCEEEEEEEESSCC---TTTSCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHH
T ss_pred cchhhcccceeEecccEEEEEecCCC---ccccCCceEEEeeeeEEcCCChhhcCcEEecCceEEEecccHHHHHHHHHH
Confidence 35656667899999999999987543 121 1123455443321110 0 000000 124456
Q ss_pred HHHHHHHHHcCCC-CCCccEEEecCCCCccCcHHHHHHHHHHHcCCC-Ccccc-cccccccccccchhHHHHHHHHHHH-
Q 008146 445 LCIEKALAHSGVS-REDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVN-STKSMIGHLLGAAGAVEAIAVVQAI- 520 (576)
Q Consensus 445 ~ai~~AL~~Agl~-~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~-~~~v~-s~K~~iGH~~gAsG~~~li~~~l~L- 520 (576)
.+++++|+++|++ .+|| ++..|..+..+ .+.+.+.++-.. ++... .+...+||+.+|+-.+.|..++..-
T Consensus 304 ~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i-----~~~~~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~ 377 (413)
T 1xes_A 304 NCMVEAFSQFKISDWNKL-FWVVHPGGRAI-----LDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASL 377 (413)
T ss_dssp HHHHHHHGGGTCCCGGGS-EEEECCSCHHH-----HHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCccce-eEEECCCCHHH-----HHHHHHHcCCChHHhHHHHHHHHhcCcCchhhHHHHHHHHHHhcc
Confidence 7899999999998 8888 89999876654 334555666432 23221 3456689999999887776665432
Q ss_pred HcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 521 RTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 521 ~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
+.|.+.| ++ ....++..+||.|-+..+++|+-
T Consensus 378 ~~G~~~~-----------------G~-----~~d~vll~~fG~G~t~~~~ll~~ 409 (413)
T 1xes_A 378 QNGCSTT-----------------GE-----GLEMGVLFGFGPGLTIETVVLKS 409 (413)
T ss_dssp HTTCSBT-----------------TT-----TCSEEEEEEEETTTEEEEEEEEE
T ss_pred ccCCCCC-----------------CC-----CcceEEEEEecCCcEEeEEEEEe
Confidence 1111100 00 12456778999999988888863
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=99.73 E-value=4.9e-16 Score=160.20 Aligned_cols=240 Identities=18% Similarity=0.193 Sum_probs=166.1
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
...|+.+|+++||+++|+++++|+ .|++++..+. ......+.+++..+
T Consensus 58 ~~~La~~Aa~~aL~~ag~~~~~Id-------~vi~~t~~~~-------------------------~~~p~~a~~v~~~l 105 (323)
T 3il3_A 58 VATMGFEAAKNAIEAAQINPQDIE-------LIIVATTSHS-------------------------HAYPSAACQVQGLL 105 (323)
T ss_dssp HHHHHHHHHHHHHHHHCCCGGGCC-------EEEEECSCCS-------------------------CSSSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeCCCC-------------------------CCCccHHHHHHHHh
Confidence 568999999999999999998666 6888875421 11223578899999
Q ss_pred CCC-CccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcc
Q 008146 315 GWM-GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGF 393 (576)
Q Consensus 315 gl~-Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~ 393 (576)
|+. .|++.|+.+|+|++.||..|+++|++|.++.+||+|+|.+.... + +++....+
T Consensus 106 Gl~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~----------------------~-~~d~~~~~ 162 (323)
T 3il3_A 106 NIDDAISFDLAAACTGFVYALSVADQFIRAGKVKKALVIGSDLNSRKL----------------------D-ETDRSTVV 162 (323)
T ss_dssp TCSSCEEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGSC----------------------C-TTCTTTTT
T ss_pred CCCCccEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEEeecccccc----------------------C-cccccccc
Confidence 995 58999999999999999999999999999999999999853210 0 11123467
Q ss_pred eecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCC---CCC------------CCCh--------HHHHHHHHHH
Q 008146 394 VMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHM---TEP------------HPDG--------VGVILCIEKA 450 (576)
Q Consensus 394 v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~---~~~------------~p~~--------~~~~~ai~~A 450 (576)
++||||+|+||++.+ +..+ .++...+++... ..+ .-++ ..+.++++++
T Consensus 163 lfGDGA~A~vl~~~~-----~~~i----~~~~~~s~g~~~~~~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~ 233 (323)
T 3il3_A 163 LFGDGAGAVILEASE-----QEGI----ISTHLHASADKNNALVLAQPERGIEKSGYIEMQGNETFKLAVRELSNVVEET 233 (323)
T ss_dssp TBCEEEEEEEEEEES-----SCCE----EEEEEEECCCCSCSEECCCCCTTCSSCSCCEECHHHHHHHHHHHHHHHHHHH
T ss_pred ccccceEEEEEEEcC-----CCCe----EEEEEEEcCCCcceEEECCCCCCCCCCCcEEEcCHHHHHHHHHHHHHHHHHH
Confidence 899999999999753 2223 333333333210 000 0011 2245678999
Q ss_pred HHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCC-CcccccccccccccccchhHHHHHHHHHHHHcCCCCCCC
Q 008146 451 LAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNI 529 (576)
Q Consensus 451 L~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~-~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~ 529 (576)
|+++|++++|||++..|-.+..+ .+.+.+.++-.. ++.. .-..+||+.+|+=.+.|.. .++.|.+.
T Consensus 234 l~~~gl~~~did~~v~Hq~~~~i-----~~~~~~~lgl~~ek~~~--~l~~~GNt~sasi~~~L~~---~~~~g~~~--- 300 (323)
T 3il3_A 234 LLANNLDKKDLDWLVPHQANLRI-----ITATAKKLEMDMSQVVV--TLDKYANNSAATVPVALDE---AIRDGRIQ--- 300 (323)
T ss_dssp HHTTTCCTTTCCEEEECCSCHHH-----HHHHHHHTTCCGGGBCC--CHHHHCBCGGGHHHHHHHH---HHHTTSSC---
T ss_pred HHHcCCCHHHCCEEEEcCCCHHH-----HHHHHHHcCcCHHHhhc--cHhhcCchHHHHHHHHHHH---HHHcCCCC---
Confidence 99999999999999999766543 345556665432 2221 2345699998886655544 34444331
Q ss_pred CCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEe
Q 008146 530 NLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573 (576)
Q Consensus 530 ~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~ 573 (576)
+-+..+..+||.|-+-+++|++
T Consensus 301 ----------------------~Gd~vll~~~G~G~t~~~~~l~ 322 (323)
T 3il3_A 301 ----------------------RGQLLLLEAFGGGWTWGSALVR 322 (323)
T ss_dssp ----------------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred ----------------------CCCEEEEEEEehhheeEEEEEE
Confidence 1235667899999999998886
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* | Back alignment and structure |
|---|
Probab=99.69 E-value=6.8e-16 Score=161.31 Aligned_cols=245 Identities=17% Similarity=0.115 Sum_probs=165.1
Q ss_pred HHHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHH
Q 008146 234 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 313 (576)
Q Consensus 234 p~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~ 313 (576)
....|+.+|+++||+++|+++++|+ .|++++.... .+ .. ...+.+++..
T Consensus 53 ~~~~La~~Aa~~aL~~ag~~~~dId-------~vi~~t~~~~------------------~~----d~--~~~a~~v~~~ 101 (357)
T 3s3l_A 53 APPRMAARAARAALGRGDVDPADVS-------LVLHSSLWFQ------------------GI----DL--WPAASYVAHE 101 (357)
T ss_dssp SHHHHHHHHHHHHHHHTTCCGGGEE-------EEEEECSSCC------------------SS----SS--SCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCC------------------Cc----cc--ccHHHHHHHH
Confidence 3578999999999999999998666 5788775200 01 11 1247889999
Q ss_pred hCCCC-ccccccCCCchHHHHHHHHHHHHHcCCCC--EEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCC
Q 008146 314 LGWMG-PNYSISTACATSNFCILNAANHIIRGEAN--VMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINR 390 (576)
Q Consensus 314 lgl~G-p~~tv~taCaSgl~AL~~A~~~I~~G~~d--~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~ 390 (576)
+|+.. |.+.|+.+|+|++.||..|.++|++|.++ .+||+|+|.+..+. ...|+. +
T Consensus 102 lG~~~~~~~~v~~aC~~~~~al~~A~~~i~sg~~~~~~vLvvg~e~~s~~~---------------------~~~~~~-~ 159 (357)
T 3s3l_A 102 AVGRHVPAFGLAQRCNGGMGAIELAGAYLGSGIGAGHAALLTTGDRFAGPR---------------------IDRWNS-V 159 (357)
T ss_dssp HTCSSSCEEEEECGGGHHHHHHHHHHHHHHTTSSSSSEEEEEEEECCCTTT---------------------CCTTTS-S
T ss_pred hCCCCCcEEEEcCccHHHHHHHHHHHHHHHcCCCCCCEEEEEEEecccccc---------------------cccccc-c
Confidence 99964 89999999999999999999999999999 99999999854211 011222 2
Q ss_pred CcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCC--C------CCC-------CCC--h-------------
Q 008146 391 DGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYH--M------TEP-------HPD--G------------- 440 (576)
Q Consensus 391 ~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~--~------~~~-------~p~--~------------- 440 (576)
.++++||||+|+||++.+ +. ..|.++...+++.. . ..+ ... +
T Consensus 160 ~~~lfGDGA~A~vl~~~~-----~~---~~i~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~ 231 (357)
T 3s3l_A 160 DVTMYGDGAAALVLSTRD-----GF---ARVLSTATGVDNSLEILARGDEPFAPHPVEPSPVADLGTRTVRGAELADLPD 231 (357)
T ss_dssp SSCCBCCEEEEEEEESSC-----CS---EEEEEEEEEECGGGGGGGTTTCCCCSSCCSSCCCCCHHHHHHHHHHHHCCTT
T ss_pred CCcccccccEEEEEecCC-----CC---CeEEEEEEEEccChhhhcccCCCCCCCccCcCCccccccchhhhhcccchhh
Confidence 578899999999998642 11 23555555444431 0 000 001 1
Q ss_pred ------HHHHHHHHHHHHHcCCCCCCccEEEe-cCCCCccCcHHHHHHHHHHHcCCC-CcccccccccccccccchhHHH
Q 008146 441 ------VGVILCIEKALAHSGVSREDVNYINA-HATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVE 512 (576)
Q Consensus 441 ------~~~~~ai~~AL~~Agl~~~dId~ve~-Hgtgt~~gD~~E~~Al~~~f~~~~-~~~v~s~K~~iGH~~gAsG~~~ 512 (576)
..+.++++++|+++|++++|||++.. |-.... -+ ++.+.++-.. ++. ......+||+.+|+=.+.
T Consensus 232 ~~~~~~~~~~~~i~~~L~~~gl~~~did~~v~~hq~~~~-~~-----~~~~~lgl~~ek~~-~~~~~~~GNt~aAsipl~ 304 (357)
T 3s3l_A 232 LTHRYIDLLVAAKTQALEDAGTAIEDIAHAVIPVSRRGT-GH-----ELHDLLGLPDERTS-WAYGRTTGHVGAGDQYAG 304 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCSEEECCSCCCCS-SC-----CHHHHHTSCGGGBT-HHHHHHHCBCTTCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHH-HH-----HHHHHcCCCHHHhH-HHhccccccchHhHHHHH
Confidence 13456889999999999999999996 876654 32 3445555332 122 122224699988876655
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 513 AIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 513 li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
|.. .++.|.+. +-...+..+||.|-+-++++|+-
T Consensus 305 L~~---~~~~g~l~-------------------------~Gd~vll~~fG~G~t~~a~ll~~ 338 (357)
T 3s3l_A 305 LAH---LVENALVQ-------------------------PGDRVLLFGGGAGYTCTAAVVEI 338 (357)
T ss_dssp HHH---HHHTTCCC-------------------------TTCEEEEECCBTTTEEEEEEEEE
T ss_pred HHH---HHHcCCCC-------------------------CCCEEEEEEEchhhhheeeeEEe
Confidence 544 34444331 12456778999998888888863
|
| >3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=3.2e-15 Score=154.01 Aligned_cols=289 Identities=14% Similarity=0.174 Sum_probs=180.7
Q ss_pred CcEEEEecceecCCC-CCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 008146 165 KRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 243 (576)
Q Consensus 165 ~~IaItGmg~~~P~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa 243 (576)
.++.|+|+|...|.- .+.+++.+.+ +.+ +.|-. ... ......+..+. . ...|+.+|+
T Consensus 3 ~~~~I~~~g~~lP~~~v~n~~~~~~~--~~~-----~~~i~-----~~~----Gi~~R~~a~~~-----e-~~~La~~Aa 60 (321)
T 3il6_A 3 NYARISCTSRYVPENCVTNHQLSEMM--DTS-----AAWIH-----SRT----GISERRIVTQE-----N-TSDLCHQVA 60 (321)
T ss_dssp CEEEEEEEEEECCSCEEEHHHHHHHT--TSC-----HHHHH-----HHH----SCSEEECCSSC-----C-HHHHHHHHH
T ss_pred CcEEEEEEEEECCCcEEcHHHHHHHh--CCC-----hhhhh-----hhc----CceEEEECCCC-----C-HHHHHHHHH
Confidence 358999999999997 6777776543 111 01100 000 00000001111 1 678999999
Q ss_pred HHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCCC-Ccccc
Q 008146 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWM-GPNYS 322 (576)
Q Consensus 244 ~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~~t 322 (576)
++||+++|+++++|+ .|++++...+ ...+..+.+++..||+. .|.+.
T Consensus 61 ~~aL~~ag~~~~~Id-------~li~~t~~~~-------------------------~~~p~~a~~v~~~lGl~~~~~~~ 108 (321)
T 3il6_A 61 KQLLEKSGKQASEID-------FILVATVTPD-------------------------FNMPSVACQVQGAIGATEAFAFD 108 (321)
T ss_dssp HHHHHHHTCCGGGCC-------EEEEECSSCS-------------------------CSSSCHHHHHHHHTTCTTCEEEE
T ss_pred HHHHHHcCCCHHHCC-------EEEEEeCCCC-------------------------cCCCcHHHHHHHHcCCCCceEEE
Confidence 999999999998666 6888875421 12234688999999997 58999
Q ss_pred ccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceEEE
Q 008146 323 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 402 (576)
Q Consensus 323 v~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAaal 402 (576)
|+.+|+|++.||..|+++|++|.++.+||+|+|.+.... . +++....+++||||+|+
T Consensus 109 v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~-----------~------------~~dr~~~~lfGDGA~A~ 165 (321)
T 3il6_A 109 ISAACSGFVYALSMAEKLVLSGRYQTGLVIGGETFSKML-----------D------------WTDRSTAVLFGDGAAGV 165 (321)
T ss_dssp ECCGGGHHHHHHHHHHHHHHTSSCCCEEEEEEECGGGGS-----------C------------TTCTTTGGGBCCEEEEE
T ss_pred eCcccHHHHHHHHHHHHHHHCCCCCEEEEEEEccccccC-----------C------------ccccccceeeccccEEE
Confidence 999999999999999999999999999999999853210 0 11223467899999999
Q ss_pred EEcchHHHHhcCCeeeEEEEEEEEecCCC------------CCCC----------CCCChHHH----HHHHHHHHHHcCC
Q 008146 403 LLEELEHAKKRGAKIYAEFRGGSFTSDAY------------HMTE----------PHPDGVGV----ILCIEKALAHSGV 456 (576)
Q Consensus 403 vL~~~~~A~~~g~~i~a~I~g~~~~~dg~------------~~~~----------~~p~~~~~----~~ai~~AL~~Agl 456 (576)
||++.+. ..+. ++...+++. .... ...++... .+.+.++++++ +
T Consensus 166 vl~~~~~-----~~i~----~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~-l 235 (321)
T 3il6_A 166 LIEAAET-----PHFL----NEKLQADGQRWTALTSGYTINESPFYQGHKQASKTLQMEGRSIFDFAIKDVSQNILSL-V 235 (321)
T ss_dssp EEEEESS-----CCEE----EEEEEECGGGGGGEECCCCCCCSTTCCCCCCCCCSCEECHHHHHHHHHHHHHHHHHTT-C
T ss_pred EEEEcCC-----CCEE----EEEEEEcCCCCCeEEeCCCCCCCCCCccccccccceeechHHHHHHHHHHHHHHHHHH-c
Confidence 9997542 1232 322222221 0000 00112211 12333334333 2
Q ss_pred CCCCccEEEecCCCCccCcHHHHHHHHHHHcCCC-CcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCC
Q 008146 457 SREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPD 535 (576)
Q Consensus 457 ~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~-~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~ 535 (576)
.++|||++..|-.+.. -.+.+.+.++-.. ++. ..-..+||+.+|+=.+.|-. .++.|.+.|-
T Consensus 236 ~~~did~~v~Hq~~~~-----i~~~~~~~lgl~~ek~~--~~l~~~GNt~sasi~~~L~~---~~~~g~~~~G------- 298 (321)
T 3il6_A 236 TDETVDYLLLHQANVR-----IIDKIARKTKISREKFL--TNMDKYGNTSAASIPILLDE---AVENGTLILG------- 298 (321)
T ss_dssp CGGGCSEEEECCSCHH-----HHHHHHHHHTCCGGGBC--CCGGGTCBCGGGHHHHHHHH---HHHTTSSCTT-------
T ss_pred CcccCCEEEEcCCCHH-----HHHHHHHHcCcCHHHhh--hhHhhcccHHHHHHHHHHHH---HHHhCCCCCC-------
Confidence 2899999999966554 3455666666432 222 24466799998876555443 3455443111
Q ss_pred CCCCcccccCCcccccCccEEEEeccCCCcceeEEEEe
Q 008146 536 AVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573 (576)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~ 573 (576)
..+..+..+||.|-+-.+++++
T Consensus 299 ----------------~~d~vll~~fG~G~t~~~~~l~ 320 (321)
T 3il6_A 299 ----------------SQQRVVLTGFGGGLTWGSLLLT 320 (321)
T ss_dssp ----------------SCCEEEEEEEETTTEEEEEEEE
T ss_pred ----------------CCCEEEEEEEehhheeEEEEEE
Confidence 0145677899999999998885
|
| >3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A | Back alignment and structure |
|---|
Probab=99.68 E-value=3.1e-16 Score=165.84 Aligned_cols=266 Identities=16% Similarity=0.116 Sum_probs=170.9
Q ss_pred hhcCCHHHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHH
Q 008146 229 SKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSA 308 (576)
Q Consensus 229 a~~mdp~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~ 308 (576)
...++....|+.+|+++||+++|+++++|+ .|+++++.+ ...+..+.
T Consensus 96 ~~~~~~~~~La~~Aa~~aL~~ag~~~~dId-------~vi~~t~t~--------------------------~~~p~~a~ 142 (393)
T 3ov2_A 96 DIVVEEIPRLAKEAAEKAIKEWGRPKSEIT-------HLVFCSISG--------------------------IDMPGADY 142 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSCGGGCC-------EEEEEESSC--------------------------CCBSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEEeCC--------------------------CCCCCHHH
Confidence 334456788999999999999999998666 688887541 11234688
Q ss_pred HHHHHhCCCCc---cccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCC
Q 008146 309 MLAMDLGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRP 385 (576)
Q Consensus 309 ~ia~~lgl~Gp---~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rp 385 (576)
+++..||+.+. .+.++.+|++++.||..|.++|++|.++.|||+|+|.+.... .+|+. +.
T Consensus 143 ~v~~~LGl~~~~~~~~~v~~~C~g~~~al~~A~~~i~sg~~~~vLvvg~E~~s~~~---------------~~~~d--~~ 205 (393)
T 3ov2_A 143 RLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAENNRGARVLVVACEITVLSF---------------RGPNE--GD 205 (393)
T ss_dssp HHHHHHTCCTTSEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECGGGTC---------------CCCCT--TC
T ss_pred HHHHHcCCCCCcceeeEEcCccHHHHHHHHHHHHHHHcCCCCEEEEEEEeccchhc---------------cCCcc--cc
Confidence 99999999874 689999999999999999999999999999999999853110 00111 01
Q ss_pred CccCCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEE-ec-CCCCC-C----------CCCCCh-----HHHHHHH
Q 008146 386 WDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSF-TS-DAYHM-T----------EPHPDG-----VGVILCI 447 (576)
Q Consensus 386 fd~~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~-~~-dg~~~-~----------~~~p~~-----~~~~~ai 447 (576)
++.....+++||||+|+||++.+.. .-...++ .+...+. .. +.... . ...+.. ..+..++
T Consensus 206 ~~~~~~~~lFGDGAaA~vl~~~~~~-~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i 283 (393)
T 3ov2_A 206 FEALAGQAGFGDGAGAVVVGADPLE-GIEKPIY-EIAAAMQETVAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSL 283 (393)
T ss_dssp HHHHHHHHHBCCEEEEEEEESSCCT-TTCCCSE-EEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHTTSHHHH
T ss_pred hhhhcccccccCccEEEEEEecCCC-cccCcee-EEEecCcEEecCCcccCceeeeCCceEEEECcHHHHHHHHHHHHHH
Confidence 1111246789999999999875421 0011222 2222211 11 11000 0 001111 1234689
Q ss_pred HHHHHHcCCCC-CCccEEEecCCCCccCcHHHHHHHHHHHcCCC-Ccccc-cccccccccccchhHHHHHHHHHH-HHcC
Q 008146 448 EKALAHSGVSR-EDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVN-STKSMIGHLLGAAGAVEAIAVVQA-IRTG 523 (576)
Q Consensus 448 ~~AL~~Agl~~-~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~-~~~v~-s~K~~iGH~~gAsG~~~li~~~l~-L~~g 523 (576)
+++|+++|+++ +|| ++..|-.+.. -.+++.+.++-.. ++..+ .+-..+||+.+|+=.+.|-.++.. ++.|
T Consensus 284 ~~~L~~~gl~~~~di-~~v~Hq~n~~-----i~~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~~~~~~~~g 357 (393)
T 3ov2_A 284 ERALAPLGVREWNDV-FWVAHPGNWA-----IIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEG 357 (393)
T ss_dssp HHHHGGGTCCSGGGS-EEEECCCCHH-----HHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCCCcccCc-EEEECCCChH-----HHHHHHHHcCCCHHHHHHHHHHHHHhCChHHhHHHHHHHHHHHhhhhcC
Confidence 99999999997 888 8999965554 3455666666432 22221 134457999999877766555433 2234
Q ss_pred CCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 524 WIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 524 ~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
.+.|- ......+..+||.|-+-.+++|+.
T Consensus 358 ~~~~G----------------------~~~d~vll~~fG~G~t~~~~ll~~ 386 (393)
T 3ov2_A 358 RSTTG----------------------DGLQWGVLLGFGPGLSIETVVLRS 386 (393)
T ss_dssp CSBTT----------------------TTCSEEEEEEEETTTEEEEEEEEE
T ss_pred CcCCC----------------------CCCCeEEEEEECccceeeeeeeEE
Confidence 33110 012456778999999999999875
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=1.2e-15 Score=159.55 Aligned_cols=242 Identities=14% Similarity=0.198 Sum_probs=163.7
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
...|+.+|+++||+++|+++++|+ .|++++..++ ......+.+++..+
T Consensus 74 ~~~La~~Aa~~aL~~agl~~~dId-------~vi~~t~~~~-------------------------~~~p~~a~~v~~~l 121 (359)
T 3h78_A 74 VSALMVPAARQAIEAAGLLPEDID-------LLLVNTLSPD-------------------------HHDPSQACLIQPLL 121 (359)
T ss_dssp THHHHHHHHHHHHHHTTCCGGGCC-------EEEEECSSCS-------------------------SSBSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCC-------EEEEEeCCCC-------------------------CCCCcHHHHHHHHc
Confidence 467999999999999999998666 6888875421 11223578999999
Q ss_pred CCCC-ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcc
Q 008146 315 GWMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGF 393 (576)
Q Consensus 315 gl~G-p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~ 393 (576)
|+.. |.+.|+.+|+|++.||..|+++|++|.++.+||+|+|.+.... . +... .....+
T Consensus 122 Gl~~~~~~~v~~aC~s~~~Al~~A~~~i~sG~~~~vLvvg~e~~S~~~-----------~-----~~d~-----~~~t~~ 180 (359)
T 3h78_A 122 GLRHIPVLDIRAQASGLLYGLQMARGQILAGLARHVLVVCGEVLSKRM-----------D-----CSDR-----GRNLSI 180 (359)
T ss_dssp TCCSCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEECGGGC-----------C-----CSTT-----THHHHT
T ss_pred CCCCCcEEEECCHhHHHHHHHHHHHHHHHCCCcCEEEEEEEchhcccC-----------C-----cccc-----cccccc
Confidence 9964 8999999999999999999999999999999999999853221 0 1000 011346
Q ss_pred eecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCC-----C------CCC--------------CCCh--------
Q 008146 394 VMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYH-----M------TEP--------------HPDG-------- 440 (576)
Q Consensus 394 v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~-----~------~~~--------------~p~~-------- 440 (576)
++||||+|+||++.+. .+..+. ++...+++.. . ..+ .-++
T Consensus 181 lfGDGAaA~vl~~~~~---~~~~i~----~~~~~s~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~ 253 (359)
T 3h78_A 181 LLGDGAGAVVVSAGES---LEDGLL----DLRLGADGNYFDLLMTAAPGSASPTFLDENVLREGGGEFLMRGRPMFEHAS 253 (359)
T ss_dssp TBCEEEEEEEEECCSC---SSSEEE----EEEEEECGGGGGGEEBCCSSTTSSSTTCHHHHHTTTTSCEECHHHHHHHHH
T ss_pred eecceeEEEEEEecCC---CCCceE----EEEEEEccCccceEEeCCCCCccCCccccccccccCCceEeccHHHHHHHH
Confidence 7999999999997432 122333 3322222210 0 000 0011
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCC-CcccccccccccccccchhHHHHHHHHHH
Q 008146 441 VGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAIAVVQA 519 (576)
Q Consensus 441 ~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~-~~~v~s~K~~iGH~~gAsG~~~li~~~l~ 519 (576)
..+.++++++|+++|++++|||++..|-.+..+ .+.+.+.++-.. ++.. .-..+||+.+|+=.+.|..++.
T Consensus 254 ~~~~~~i~~~L~~~gl~~~did~~v~Hq~n~~i-----~~~~~~~lgl~~ek~~~--~l~~~GNt~sAsi~l~L~~~~~- 325 (359)
T 3h78_A 254 QTLVRIAGEMLAAHELTLDDIDHVICHQPNLRI-----LDAVQEQLGIPQHKFAV--TVDRLGNMASASTPVTLAMFWP- 325 (359)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHH-----HHHHHHHHTCCGGGBCC--CHHHHCBCGGGHHHHHHHHHGG-
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH-----HHHHHHHhCcCHHHhhh--hhhcccchHHHHHHHHHHHHHH-
Confidence 124478899999999999999999999766543 455566665432 2222 2345799998886655544321
Q ss_pred HHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEe
Q 008146 520 IRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573 (576)
Q Consensus 520 L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~ 573 (576)
. + .+-+..+..+||.|-+.++++|+
T Consensus 326 --~--l-------------------------~~Gd~vll~~fG~G~t~~~~ll~ 350 (359)
T 3h78_A 326 --D--I-------------------------QPGQRVLVLTYGSGATWGAALYR 350 (359)
T ss_dssp --G--S-------------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred --h--C-------------------------CCCCEEEEEEEchhhhheeeeEE
Confidence 1 1 01234667789999999999886
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.66 E-value=2.8e-15 Score=156.54 Aligned_cols=241 Identities=16% Similarity=0.098 Sum_probs=164.5
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
...|+.+|+++||+++|+++++|+ .|++++..++ ......+.+++..+
T Consensus 66 ~~~La~~Aa~~aL~~agi~~~~Id-------~vi~~t~~~~-------------------------~~~p~~a~~v~~~l 113 (354)
T 4efi_A 66 AGDLCRKAGEKLLAGLGWQADSID-------ALIFVSQTPN-------------------------YRLPATAFVLQAEL 113 (354)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSSCS-------------------------CSSSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeCCCC-------------------------CCCCcHHHHHHHHc
Confidence 467999999999999999998666 6888876421 11234678999999
Q ss_pred CC--CCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCc
Q 008146 315 GW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDG 392 (576)
Q Consensus 315 gl--~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G 392 (576)
|+ ..|.+.|+.+|+|++.||..|.++|++|.++.+||+|+|.+.... . +++....
T Consensus 114 Gl~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~-----------~------------~~d~~~~ 170 (354)
T 4efi_A 114 DLPASCLALDINLGCSGYPQALWLGMNLIQTGAAKRVLLAVGDTISKMI-----------D------------PTDRSTS 170 (354)
T ss_dssp TCCTTSEEEEECCCTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGGC-----------C------------TTCHHHH
T ss_pred CcCCCccEEeeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechhcccC-----------C------------ccccccc
Confidence 99 368999999999999999999999999999999999999853211 0 1111235
Q ss_pred ceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCC-----CC----CCC-----------------CCCh------
Q 008146 393 FVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAY-----HM----TEP-----------------HPDG------ 440 (576)
Q Consensus 393 ~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~-----~~----~~~-----------------~p~~------ 440 (576)
+++||||+|+||++.+. ..+. .+...+++. .. ..| ..++
T Consensus 171 ~lfGDGA~A~vl~~~~~-----~~~~----~~~~~s~g~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~g~~v~~~ 241 (354)
T 4efi_A 171 LLFGDAGTMTALETSNG-----DAAA----HFIIGADGKGARNLIVPSGGFKPYDAAADERMAGKSPECLFMDGGEIFNF 241 (354)
T ss_dssp TTBCCEEEEEEEEECCS-----CCEE----EEEEEECGGGGGGEECCSSSSSCCCGGGCGGGTTCCTTSCEECHHHHHHH
T ss_pred cccccceeEEEEeecCC-----CCce----EEEEEEcCCCcceEEecCCCCCCCccccccccccccccceEEccHHHHHH
Confidence 67999999999997432 1121 222222221 00 000 0011
Q ss_pred --HHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCC-CcccccccccccccccchhHHHHHHHH
Q 008146 441 --VGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAIAVV 517 (576)
Q Consensus 441 --~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~-~~~v~s~K~~iGH~~gAsG~~~li~~~ 517 (576)
..+.++++++|+++|++++|||++..|-.+..+ .+.+.+.++-.. ++. ..-..+||+.+|+=.+.|..++
T Consensus 242 ~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~i-----~~~~~~~Lgl~~ek~~--~~l~~~GNt~sasi~~~L~~~~ 314 (354)
T 4efi_A 242 TLNAVPKLVSRTLDIAGRDKDSYDAFLFHQANLFM-----LKHLAKKAGLPAERVP--VNIGEYGNTSCASIPLLITTEL 314 (354)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHH-----HHHHHHHTTCCGGGSC--CCHHHHCBCGGGHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCHHH-----HHHHHHHhCcCHHHHH--HHHhhhCcHHHHHHHHHHHHHH
Confidence 234567899999999999999999999766543 445566665332 122 2235679999888666554433
Q ss_pred HHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 518 QAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 518 l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
+.+.+ .+-+..+..+||.|-+.++++++-
T Consensus 315 ---~~g~~-------------------------~~Gd~vll~~fG~G~t~~~~ll~~ 343 (354)
T 4efi_A 315 ---KDRLK-------------------------EETLQLGMFGFGVGYSWASAALAV 343 (354)
T ss_dssp ---HHHHH-------------------------HSCEEEEEEEEETTTEEEEEEEEE
T ss_pred ---HhCCC-------------------------CCCCEEEEEEEchhhhheeeEEEE
Confidence 22211 012456778999999999998874
|
| >2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=4.8e-15 Score=159.50 Aligned_cols=228 Identities=15% Similarity=0.114 Sum_probs=151.1
Q ss_pred cEEEEecceecCCC-CCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 008146 166 RVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 244 (576)
Q Consensus 166 ~IaItGmg~~~P~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa~ 244 (576)
.|.|.|+|..+|.- .+.+++-+.+ |.+ +.|-.... | +..+ .+..+. .....|+.+|+.
T Consensus 3 ~v~I~~ig~y~P~~~v~~~~l~~~~--g~~-----~~~~~~g~-----G-~~~~---~~~~~~-----e~~~~La~~Aa~ 61 (450)
T 2f82_A 3 NVGILAMDIYFPPTCVQQEALEAHD--GAS-----KGKYTIGL-----G-QDCL---AFCTEL-----EDVISMSFNAVT 61 (450)
T ss_dssp SCEEEEEEEECCSEEEEHHHHHHHT--TCC-----TTTTTTTS-----C-CCEE---ECCCTT-----CCHHHHHHHHHH
T ss_pred ceEEEEEEEECCCeeccHHHHHHHh--CCC-----HHHhhhhh-----C-ceee---eeCCCC-----CCHHHHHHHHHH
Confidence 47899999999987 5666665542 221 11100000 0 0000 000111 124689999999
Q ss_pred HHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCC----CCcc
Q 008146 245 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGW----MGPN 320 (576)
Q Consensus 245 eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl----~Gp~ 320 (576)
+||+++|+++++|+ .|++|+..+. ......+..++..||+ ..++
T Consensus 62 ~aL~~agi~~~~Id-------~li~~t~t~~-------------------------~~~p~~a~~v~~~lgl~g~~~~~~ 109 (450)
T 2f82_A 62 SLLEKYKIDPKQIG-------RLEVGSETVI-------------------------DKSKSIKTFLMQLFEKCGNTDVEG 109 (450)
T ss_dssp HHHHHTTCCGGGEE-------EEEEECCCCS-------------------------CSSSCHHHHHTHHHHTTTCCCCBC
T ss_pred HHHHHcCcCHHHCC-------EEEEEecCCC-------------------------CCCCcHHHHHHHHhCCcCCCCceE
Confidence 99999999987555 5667765321 1124567888888888 3588
Q ss_pred ccccCCCchHHHHHHHHHHHHHcCCC--CEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCc
Q 008146 321 YSISTACATSNFCILNAANHIIRGEA--NVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEG 398 (576)
Q Consensus 321 ~tv~taCaSgl~AL~~A~~~I~~G~~--d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEG 398 (576)
+.|+.+|+|++.||..|.++|++|.+ +.|||+|+|.+. |+....+.+.|||
T Consensus 110 ~~v~~aC~gg~~AL~~A~~~I~sg~~~~~~vLVvg~e~~~---------------------------~~~~~~~~~fGDG 162 (450)
T 2f82_A 110 VDSTNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSAV---------------------------YAEGPARPTGGAA 162 (450)
T ss_dssp CEECSGGGHHHHHHHHHHHHHHSTTCCSCEEEEEEEEEEC---------------------------CSSSTTGGGCEEE
T ss_pred EEhhhhhHHHHHHHHHHHHHHHcCCCcCCeEEEEEeeecc---------------------------ccCCCCCcccccc
Confidence 99999999999999999999999998 999999999742 1112357789999
Q ss_pred eEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCC-------CCCCChH--------HHHHHHHHHHH------HcCCC
Q 008146 399 AGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMT-------EPHPDGV--------GVILCIEKALA------HSGVS 457 (576)
Q Consensus 399 AaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~-------~~~p~~~--------~~~~ai~~AL~------~Agl~ 457 (576)
|+|+||++.+. . .+.....|..... .+... .+..++. .+..+++++++ ++|++
T Consensus 163 A~A~ll~~~~~----~-~~~~~~~g~~~~~-~~d~~~p~~~~~~~~~~G~~~~~~~~~~l~~~~~~~l~~~~~~~~agl~ 236 (450)
T 2f82_A 163 AIAMLIGPDAP----I-VFESKLRGSHMAH-VYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKLEGKEFS 236 (450)
T ss_dssp EEEEEEESSCS----E-EEEEEEEEEEECC-CCSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred eEEEEeccCCc----e-EEEeccceeehhh-ccceeeeCCCCCceeecCccHHHHHHHHHHHHHHHHHHHhhhccccCCC
Confidence 99999986531 1 1222223433322 11111 1222332 34577888886 89999
Q ss_pred CCCccEEEecCCCCccCcHHHH
Q 008146 458 REDVNYINAHATSTPAGDIKEY 479 (576)
Q Consensus 458 ~~dId~ve~Hgtgt~~gD~~E~ 479 (576)
++|||||..|..++++.+....
T Consensus 237 ~~did~~v~Hq~~~~i~~~~~~ 258 (450)
T 2f82_A 237 INDADYFVFHSPYNKLVQKSFA 258 (450)
T ss_dssp GGGCSEEEECCSSHHHHHHHHH
T ss_pred hhhcCEEEecCChHHHHHHHHH
Confidence 9999999999999988776643
|
| >4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} | Back alignment and structure |
|---|
Probab=99.64 E-value=3e-15 Score=156.03 Aligned_cols=246 Identities=20% Similarity=0.229 Sum_probs=161.6
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
...|+.+|+++||+++|+++++|+ .|++++..+ ....+..+.+|...|
T Consensus 62 ~~~la~~Aa~~aL~~ag~~~~dId-------~li~~t~t~-------------------------~~~~P~~a~~v~~~L 109 (350)
T 4ewp_A 62 VPVMAVGAAREALERAGLQGSDLD-------AVIVSTVTF-------------------------PHATPSAAALVAHEI 109 (350)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCS-------EEEEECSCC-------------------------SCSSSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccC-------------------------CCCCCchHHHHHHHh
Confidence 456999999999999999998776 577776542 122345688999999
Q ss_pred CCCC-ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcc
Q 008146 315 GWMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGF 393 (576)
Q Consensus 315 gl~G-p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~ 393 (576)
|++. +++.|+.+|++++.||..|..+|++|..+.+||+++|.+... +. +......+
T Consensus 110 Gl~~~~a~di~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~E~~s~~-----------~d------------~~~~~~~~ 166 (350)
T 4ewp_A 110 GATPAPAYDVSAACAGYCYGVAQADALVRSGTARHVLVVGVERLSDV-----------VD------------PTDRSISF 166 (350)
T ss_dssp TCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGG-----------CC------------TTCTTTGG
T ss_pred CCCCceEEEeecchhhHHHHHHHhhhhhhCCCccceeEeeeeeceec-----------cc------------cccccccc
Confidence 9975 788999999999999999999999999999999999974211 11 12223467
Q ss_pred eecCceEEEEEcchHHHHhcCCeeeEEEEEEEE--------ec----------------CCCCCC------C--CCCChH
Q 008146 394 VMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSF--------TS----------------DAYHMT------E--PHPDGV 441 (576)
Q Consensus 394 v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~--------~~----------------dg~~~~------~--~~p~~~ 441 (576)
.+||||+|+||++.+. ..+...+.+..- .. +..... . ..-++.
T Consensus 167 lfgDGA~A~vl~~~~~-----~~~~~~~~~sdg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 241 (350)
T 4ewp_A 167 LLGDGAGAVIVAASDE-----PGISPSVWGSDGERWSTISMTHSQLELRDAVEHARTTGDASAITGAEGMLWPTLRQDGP 241 (350)
T ss_dssp GBCEEEEEEEEEEESS-----CCBCCCEEEECGGGTTSEEESSCHHHHHHHHHHHHHHSCCTTTTTCSSCSSCCEEECHH
T ss_pred ccccchheeeeecccC-----CCccceeeeecccccceeeecCCccccCcccccccccCCccccccccccccceeEehhH
Confidence 8999999999986432 112211211100 00 000000 0 001121
Q ss_pred --------HHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCCCcccccccccccccccchhHHHH
Q 008146 442 --------GVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEA 513 (576)
Q Consensus 442 --------~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~l 513 (576)
.+.++++++|+++|++++|||++..|-.+... .+++.+.++-.....+...-..+||+.+|+=.+.|
T Consensus 242 ~v~~~a~~~~~~~i~~~L~~~gl~~~did~~v~Hq~~~~i-----~~~~~~~Lgl~~~~~~~~~l~~~GNtssasi~~~L 316 (350)
T 4ewp_A 242 SVFRWAVWSMAKVAREALDAAGVEPEDLAAFIPHQANMRI-----IDEFAKQLKLPESVVVARDIADAGNTSAASIPLAM 316 (350)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHTCCGGGEEEEEECCSCHHH-----HHHHHHHTTCCTTSEECCTHHHHCBCGGGHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHhhcCChhHhceEEecCCCHHH-----HHHHHHHcCcChHhEEecccccccchHHHHHHHHH
Confidence 23578999999999999999999999766543 44556666543222222222457999888755444
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEe
Q 008146 514 IAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573 (576)
Q Consensus 514 i~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~ 573 (576)
.. .+++|.+. +-..++..+||-|=+-+++|++
T Consensus 317 ~~---~~~~g~~~-------------------------~Gd~vll~~fG~G~t~~~~vlr 348 (350)
T 4ewp_A 317 HR---LLEENPEL-------------------------SGGLALQIGFGAGLVYGAQVVR 348 (350)
T ss_dssp HH---HHHHCGGG-------------------------TTSEEEEEEEETTTEEEEEEEE
T ss_pred HH---HHHhCCCC-------------------------CcCEEEEEEEchhhEeEEEEEE
Confidence 33 34444331 1234566789987777788875
|
| >3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A | Back alignment and structure |
|---|
Probab=99.64 E-value=1.7e-15 Score=159.86 Aligned_cols=265 Identities=16% Similarity=0.129 Sum_probs=163.9
Q ss_pred hhhhcCCHHHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchh
Q 008146 227 KLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMG 306 (576)
Q Consensus 227 ~~a~~mdp~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 306 (576)
+....++....|+.+|+++||+++|+++++|+ .|++++..+ ...+..
T Consensus 88 r~~~~~~~~~~La~~Aa~~AL~~ag~~~~dId-------~li~~t~t~--------------------------~~~p~~ 134 (387)
T 3oit_A 88 RLDIAADAVPELAAEAAKKAIAEWGRPAADIT-------HLVVTTNSG--------------------------AHVPGV 134 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCC-------EEEEEESSC--------------------------CEESCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeeCC--------------------------CCcccH
Confidence 33344456788999999999999999998666 688887541 112346
Q ss_pred HHHHHHHhCCCCc---cccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCC
Q 008146 307 SAMLAMDLGWMGP---NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKAS 383 (576)
Q Consensus 307 a~~ia~~lgl~Gp---~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~ 383 (576)
+.+++..||+.+. .+.++.+|++++.||..|.++|++|.++.|||+|+|.+.... .+|+.
T Consensus 135 a~~v~~~LGl~~~~~~~~~~~~~C~~~~~al~~A~~~i~sg~~~~vLvvg~E~~s~~~---------------~~~~d-- 197 (387)
T 3oit_A 135 DFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGARVLVVAAELTLMYF---------------TGPDE-- 197 (387)
T ss_dssp HHHHHHHHTCCTTCEEEEEECCGGGHHHHHHHHHHHHHHSSTTCEEEEEEEECGGGTC---------------CCCCS--
T ss_pred HHHHHHHhCCCCCcceeeEECchhHHHHHHHHHHHHHHhcCCCCEEEEEEEeccchhc---------------cCccc--
Confidence 7899999999873 689999999999999999999999999999999999853110 00110
Q ss_pred CCCccCCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCC-------CC------CCCC-----hHHHHH
Q 008146 384 RPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHM-------TE------PHPD-----GVGVIL 445 (576)
Q Consensus 384 rpfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~-------~~------~~p~-----~~~~~~ 445 (576)
+.++.....+++||||+|+||++.+. ........+.+.+........ .. .... ...+..
T Consensus 198 ~~~~~~~~~~lFGDGAaA~vl~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~ 274 (387)
T 3oit_A 198 GCFRTLLVQGLFGDGAAAVIVGADAD---DVERPLFEIVSAAQTIIPESDHALNMRFTERRLDGVLGRQVPGLIGDNVER 274 (387)
T ss_dssp SSCHHHHHHHHBCCEEEEEEEESSCC---SSCCCCEEEEEEEEEECTTCTTSEEEEECSSSEEEEECTTHHHHHHHHHHH
T ss_pred cchHhhhcccccccceEEEEEecCCC---cccCCceEEEecccEEeCCChhhccceeecCCeEEEECcHHHHHHHHHHHH
Confidence 11111124678999999999987541 111122344443322111000 00 0011 234457
Q ss_pred HHHHHHHHc----CCCCCCcc--EEEecCCCCccCcHHHHHHHHHHHcCCC-Ccccc-cccccccccccchhHHHHHHHH
Q 008146 446 CIEKALAHS----GVSREDVN--YINAHATSTPAGDIKEYQALIHCFGQNR-GLRVN-STKSMIGHLLGAAGAVEAIAVV 517 (576)
Q Consensus 446 ai~~AL~~A----gl~~~dId--~ve~Hgtgt~~gD~~E~~Al~~~f~~~~-~~~v~-s~K~~iGH~~gAsG~~~li~~~ 517 (576)
+++++|+++ |++ |+| ++..|-.+..+ .+++.+.++-.. ++..+ .+-..+||+.+|+=.+.|-.+
T Consensus 275 ~~~~~L~~~~~~~gl~--d~d~~~~v~Hq~n~~i-----l~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~- 346 (387)
T 3oit_A 275 CLLDMFGPLLGGDGGG--GWNDLFWAVHPGSSTI-----MDQVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDEL- 346 (387)
T ss_dssp HHHHHTGGGCC--------GGGSEEEECCCCHHH-----HHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHH-
T ss_pred HHHHHHHhhcccCCCC--cccccEEEECCCCHHH-----HHHHHHHcCCCHHHHHHHHHHHHHhCchHHhHHHHHHHHH-
Confidence 888889999 988 666 99999666543 455555665432 22221 233457999988766555442
Q ss_pred HHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 518 QAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 518 l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
..+.+.+.. .. ......+..+||-|-+-..++|+.
T Consensus 347 ---~~~~~~~G~--------------~g-----~~~d~vll~~fG~G~t~~~~ll~~ 381 (387)
T 3oit_A 347 ---RRQRKEAAA--------------AG-----EWPELGVMMAFGPGMTVDAMLLHA 381 (387)
T ss_dssp ---HHC-----------------------------CCEEEEEEEETTTEEEEEEEEE
T ss_pred ---HHhhhccCC--------------CC-----CCCCEEEEEEecccceeeeeeeEe
Confidence 222221110 00 012456778999999999999985
|
| >3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=99.58 E-value=1.4e-13 Score=147.82 Aligned_cols=262 Identities=12% Similarity=0.073 Sum_probs=162.3
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
...|+.+|+++||+++|+++++|+ .|+++++. + ...+..+.+++..|
T Consensus 110 a~~La~~Aa~~AL~~agi~~~dId-------~li~~t~t-~-------------------------~~~P~~a~~v~~~L 156 (465)
T 3e1h_A 110 GVPLAVEASRKAMAEARLVPAQIT-------HMVSTTCT-D-------------------------SANPGYDHYVAKEL 156 (465)
T ss_dssp THHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSS-C-------------------------CCSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeeC-C-------------------------CCCCcHHHHHHHHh
Confidence 358999999999999999998776 67887753 1 12334688999999
Q ss_pred CCCC-c-cccc-cCCCchHHHHHHHHHHHHHc----CCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCc
Q 008146 315 GWMG-P-NYSI-STACATSNFCILNAANHIIR----GEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWD 387 (576)
Q Consensus 315 gl~G-p-~~tv-~taCaSgl~AL~~A~~~I~~----G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd 387 (576)
|+.. + .+.| +.+|++++.||..|.++|++ |.++.|||+|+|.+...... ....... ..+
T Consensus 157 Gl~~~~~~~dv~~~~Csgg~~AL~~A~~~i~a~~~~G~~~~vLVvg~E~~S~~~~~-~~~~~~~-------------~~~ 222 (465)
T 3e1h_A 157 GLSDRLEKVLLHGIGCSGGLAALRTAANLCLGHTARGKPARILVLALEVSTTMVRS-ELESIDA-------------LQE 222 (465)
T ss_dssp TCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEECCGGGHHH-HHHHHHH-------------HTC
T ss_pred CCCCCeeEEEecCCcchHHHHHHHHHHHHHhcccccCCCCEEEEEEEeecchhcCc-ccccccc-------------ccc
Confidence 9976 4 5888 79999999999999999997 99999999999995432211 1111000 012
Q ss_pred cCCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCC-------------CCCC-----hHHHHHHHHH
Q 008146 388 INRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTE-------------PHPD-----GVGVILCIEK 449 (576)
Q Consensus 388 ~~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~-------------~~p~-----~~~~~~ai~~ 449 (576)
+....+++||||+|+||++.+... .....+..+.++........... ..+. ...+..++++
T Consensus 223 d~~t~~LFGDGAaAvVl~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~g~~V~~~a~~~v~~~i~~ 301 (465)
T 3e1h_A 223 TRIGIALFSDCASAVILSNGIGEA-PGKPAIYDLLGWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYAD 301 (465)
T ss_dssp CCCHHHHBCCEEEEEEEECCTTCC-TTCCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHH
T ss_pred ccccccccccceeEEEEEccCCCc-cccccceeeccceEEEecCCccccCccccCCCceEecChHHHHHHHHHHHHHHHH
Confidence 233567899999999998753210 01222334555433221110000 0011 2345578888
Q ss_pred HHHH-------cCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCC-Cccc-ccccccccccccchhHHHHHHHHHHH
Q 008146 450 ALAH-------SGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRV-NSTKSMIGHLLGAAGAVEAIAVVQAI 520 (576)
Q Consensus 450 AL~~-------Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~-~~~v-~s~K~~iGH~~gAsG~~~li~~~l~L 520 (576)
+|++ +|++++||||+ .|-.+.. -.+++.+.++-.. ++.. ...-..+||+.+|+=.+.|-. .+
T Consensus 302 ~L~~~g~~L~~agl~~~DId~~-~Hqan~r-----Il~~v~~~Lgl~~ek~~~s~~~l~~yGNtsSASip~aL~~---~~ 372 (465)
T 3e1h_A 302 LLSSLQDQLPSSYQKPADFDWA-MHPGGAT-----ILSGAESAMGLTPEHMRASYDRYINHGNSSSATIFSVLNR---LR 372 (465)
T ss_dssp HHHHHGGGSCTTSCSGGGSEEE-ECCSSHH-----HHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHH---HT
T ss_pred HHHhccccccccCCCHHHceEE-ecCCChH-----HHHHHHHHhCcCHHHhHHHHHHHhcceechHhHHHHHHHH---HH
Confidence 8887 67999999999 9965554 3455556665331 1111 111123599988874444332 22
Q ss_pred Hc--CCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 521 RT--GWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 521 ~~--g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
+. |.+.|. .+ .....+..+||-|=+-..++|+-
T Consensus 373 ~~~~g~l~~G-------------------g~--~~d~vll~gfG~Glt~~~~llr~ 407 (465)
T 3e1h_A 373 EKDMDALAPG-------------------GK--VKEYVVGCAFGPGINVEMCMLKR 407 (465)
T ss_dssp STTTTSCSSS-------------------SC--CCSEEEEEEEETTTEEEEEEEEE
T ss_pred HhcccccCCC-------------------CC--CCCEEEEEEEhHHHhhhheeeEE
Confidence 22 222111 00 12456777999888888888764
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A | Back alignment and structure |
|---|
Probab=99.44 E-value=3.8e-12 Score=129.80 Aligned_cols=176 Identities=19% Similarity=0.180 Sum_probs=115.8
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
...|+.+|+++||++||+++++|+ .|++|+... + ...+..++..+
T Consensus 55 ~sdLa~~Aa~~AL~~AGi~~~DID-------~II~gt~t~---------------------q-------~~~A~~va~~L 99 (347)
T 3lma_A 55 ERKLMEDAVQSALSKQNLKKEDID-------IFLAGDLLN---------------------Q-------NVTANYVARHL 99 (347)
T ss_dssp HHHHHHHHHHHHHHTTTCCGGGCS-------EEEEEESSS---------------------S-------STTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeCCC---------------------c-------hhHHHHHHHHh
Confidence 467999999999999999998777 688886531 0 11455667777
Q ss_pred CCCCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcce
Q 008146 315 GWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFV 394 (576)
Q Consensus 315 gl~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v 394 (576)
|+ |.+.|+.+|+|++.||..|..+|++|.+|.|||+|+|.+........|.. ..+..+|.. -..
T Consensus 100 gi--pafdV~~ACsg~~~AL~~Aa~~I~sG~~~~VLVVGaE~~S~aerq~r~p~----------e~g~q~p~t----a~~ 163 (347)
T 3lma_A 100 KI--PFLCLFGACSTSMESIAISSALIDGGFAKRALAATSSHNATAERQFRYPT----------EYGGQKPGT----ATS 163 (347)
T ss_dssp CC--CEEEBCCSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGTTCCC------------------------------
T ss_pred CC--CEEEecChhHHHHHHHHHHHHHHhcCCCCEEEEEEeccccchhhhccCcc----------hhcccCCch----hcE
Confidence 53 89999999999999999999999999999999999998654321111100 001122221 123
Q ss_pred ecCceEEEEEcchHHHHhcCCeeeEEEEEEEEe--cCCCCCCCCCCCh----HHHHHHHHHHHHHcCCCCCCccEEEecC
Q 008146 395 MGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFT--SDAYHMTEPHPDG----VGVILCIEKALAHSGVSREDVNYINAHA 468 (576)
Q Consensus 395 ~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~--~dg~~~~~~~p~~----~~~~~ai~~AL~~Agl~~~dId~ve~Hg 468 (576)
.++||||+||++.. ..+ +|.+.... .| .....+...+ +...+.|++.|+++|++|+|+|+|..++
T Consensus 164 t~dGAGA~VL~~~g------~~p--~I~~~t~Gkvvd-~g~~d~~nmg~amaPaA~~ti~~~l~d~g~~~~d~D~ivtgd 234 (347)
T 3lma_A 164 TVTGSGAVVLSQQP------GGI--KITSATVGRVID-LGITDSQDMGSAMAPAAADTIKQHLEDLGRTPDDYDLILTGD 234 (347)
T ss_dssp CCCEEEEEEEESSC------CSE--EEEEEECCCCBC-CSCCCTTCHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEES
T ss_pred EccceeEEEEEecC------CCC--ceeeeeeeeeec-cCCCCCCCccccchHHHHHHHHHHHHHhCCCHHHcCEEecCC
Confidence 46899999999642 222 24443321 11 1122222222 3345778999999999999999999754
Q ss_pred CC
Q 008146 469 TS 470 (576)
Q Consensus 469 tg 470 (576)
.+
T Consensus 235 L~ 236 (347)
T 3lma_A 235 LS 236 (347)
T ss_dssp CH
T ss_pred hH
Confidence 43
|
| >3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=3.6e-13 Score=141.92 Aligned_cols=263 Identities=14% Similarity=0.120 Sum_probs=160.9
Q ss_pred CcEEEEecceecCCC-CCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 008146 165 KRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 243 (576)
Q Consensus 165 ~~IaItGmg~~~P~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa 243 (576)
..|.|+|+|...|.- .+.+++-+.+ |.+. .|-.... | +.. ..+..+. .....|+.+|+
T Consensus 6 m~v~I~~~g~y~P~~~v~~~~l~~~~--g~~~-----~~~~~~~-----G-i~~---r~~~~~~-----e~~~~La~~Aa 64 (388)
T 3v4n_A 6 MTIGIDKISFFVPPYYIDMTALAEAR--NVDP-----GKFHIGI-----G-QDQ---MAVNPIS-----QDIVTFAANAA 64 (388)
T ss_dssp CCEEEEEEEEECCSEEEEHHHHHHHT--TSCT-----HHHHTTT-----C-CCE---EECCCTT-----CCHHHHHHHHH
T ss_pred eeEEEEEEEEECCCeEEcHHHHHHHh--CCCH-----HHHHHHh-----C-ceE---EEECCCC-----CCHHHHHHHHH
Confidence 369999999999997 6777765543 2110 0000000 0 000 0000111 12467999999
Q ss_pred HHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCCCC--ccc
Q 008146 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG--PNY 321 (576)
Q Consensus 244 ~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G--p~~ 321 (576)
++||+++| +++|+ .|++++..+. ......+..++..||+.+ +.+
T Consensus 65 ~~aL~~a~--~~~Id-------~li~~t~t~~-------------------------~~~ps~a~~v~~~LGl~~~~~~~ 110 (388)
T 3v4n_A 65 EAILTKED--KEAID-------MVIVGTESSI-------------------------DESKAAAVVLHRLMGIQPFARSF 110 (388)
T ss_dssp HTTCCHHH--HHHEE-------EEEEECSSCS-------------------------BSSSCHHHHHHHHTTCCSSCEEE
T ss_pred HHHHHhCC--cccCC-------EEEEEeccCC-------------------------CcCccHHHHHHHHcCCCCCceEe
Confidence 99999987 66555 6788875421 112345889999999975 889
Q ss_pred cccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceEE
Q 008146 322 SISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGV 401 (576)
Q Consensus 322 tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAaa 401 (576)
.+..+|++++.||..|.++|++|.++.|||+|+|.+... ++ ..+..+.||||+|
T Consensus 111 dv~~aC~gg~~AL~~A~~~i~sg~~~~vLVvg~e~~s~~-------------------------~~-~~~~~lfGDGA~A 164 (388)
T 3v4n_A 111 EIKEAXYGATAGLQLAKNHVALHPDKKVLVVAADIAKYG-------------------------LN-SGGEPTQGAGAVA 164 (388)
T ss_dssp EEESGGGHHHHHHHHHHHHHHHCTTCEEEEEEEEEECCC-------------------------TT-CTTGGGCEEEEEE
T ss_pred ehhhhhhHHHHHHHHHHHHHhcCCCCEEEEEEehhhccc-------------------------CC-CCCCCccccceeE
Confidence 999999999999999999999999999999999984211 11 1235779999999
Q ss_pred EEEcchHHHHhcCCeeeEE-EEEEEEecCCCCCCCCC----C--C--------hHHHHHHHHHHHHHcCCCCCCccEEEe
Q 008146 402 LLLEELEHAKKRGAKIYAE-FRGGSFTSDAYHMTEPH----P--D--------GVGVILCIEKALAHSGVSREDVNYINA 466 (576)
Q Consensus 402 lvL~~~~~A~~~g~~i~a~-I~g~~~~~dg~~~~~~~----p--~--------~~~~~~ai~~AL~~Agl~~~dId~ve~ 466 (576)
+||++.+ .+... ....+...+......|. + + ...+..+++++|+++|++++|||++..
T Consensus 165 ~ll~~~~-------~il~~~~~~~~~~~~~~df~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~g~~~~did~~v~ 237 (388)
T 3v4n_A 165 MLVSSEP-------RILALKEDNVMLTQDIYDFWRPTGHPYPMVDGPLSNETYIQSFAQVWDEHKKRTGLDFADYDALAF 237 (388)
T ss_dssp EEEEESC-------SSEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEE
T ss_pred EEeecCC-------CceEEeccccccchhccccccCCCCCCceeccHhHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEe
Confidence 9998732 22211 01111111211100111 1 1 134457899999999999999999999
Q ss_pred cCCCCccCcHHH---H----HHHHHHHcCCCCcccccccccccccccchhHHHHHHH
Q 008146 467 HATSTPAGDIKE---Y----QALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAV 516 (576)
Q Consensus 467 Hgtgt~~gD~~E---~----~Al~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~ 516 (576)
|-..+..+-..- + +.+.+.++.... .....-..+||+.+|+=.+.|..+
T Consensus 238 Hqp~~k~~~ka~~ril~~~~~~~~~~l~~~~e-~~~~~~~~~GN~~sASi~l~L~~~ 293 (388)
T 3v4n_A 238 HIPYTKMGKKALLAKISDQTEAEQERILARYE-ESIIYSRRVGNLYTGSLYLGLISL 293 (388)
T ss_dssp CCSSHHHHHHHHHHHSTTSCHHHHHHHHHHHH-HHTTTGGGTCCCGGGHHHHHHHHH
T ss_pred CCCcchHHHHHHHHHHhcccHHHHHHhCCCHH-HHhhHHHhcCchHHHHHHHHHHHH
Confidence 985544221110 0 222333321100 122344567999988866655444
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.43 E-value=7.9e-12 Score=132.48 Aligned_cols=241 Identities=12% Similarity=-0.024 Sum_probs=159.8
Q ss_pred HHHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHH
Q 008146 234 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 313 (576)
Q Consensus 234 p~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~ 313 (576)
....|+.+|+++||+++|+++++|+ .|+++++.+ + ..+..+.+++..
T Consensus 136 ~~~~La~~Aa~~AL~~agi~~~dId-------~li~~t~t~---------------------~-----~~P~~a~~v~~~ 182 (413)
T 3v7i_A 136 AVQAYGERAARGALQIAGLDVADVD-------CLITSNSTT---------------------P-----ALPGLDVALANR 182 (413)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECCSS---------------------C-----CSSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhCcCHHHCC-------EEEEEccCC---------------------C-----CcCHHHHHHHHH
Confidence 4567999999999999999998776 688887642 1 123457889999
Q ss_pred hCCCC--ccccc-cCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCC
Q 008146 314 LGWMG--PNYSI-STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINR 390 (576)
Q Consensus 314 lgl~G--p~~tv-~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~ 390 (576)
+|+.. +.+.| +.+|++++.||..|.++|++|.++.|||+|+|.+.... + +++..
T Consensus 183 LGl~~~~~~~~v~~~~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~~~----------------------~-~~d~~ 239 (413)
T 3v7i_A 183 LPLRGDTMLLPATQWACVAGTRSLALAADLVAADPDRVVLVVISEALSTTY----------------------Q-PADDT 239 (413)
T ss_dssp TTCCTTCEEEEESSCGGGHHHHHHHHHHHHHHHCTTCEEEEEEEECGGGGC----------------------C-SSCCS
T ss_pred hCCCCCceEEEeeCCccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccccc----------------------C-ccccc
Confidence 99976 45777 99999999999999999999999999999999853211 1 11111
Q ss_pred C-----cceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCC-------------CCCCC----hHHHHHHHH
Q 008146 391 D-----GFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMT-------------EPHPD----GVGVILCIE 448 (576)
Q Consensus 391 ~-----G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~-------------~~~p~----~~~~~~ai~ 448 (576)
. ..++||||+|+||++.+.. . +..+|.+........... ..... ...+..+++
T Consensus 240 ~~~lv~~~LFGDGAaAvvl~~~~~~----~-~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~m~~~v~~~v~~~~~~i~ 314 (413)
T 3v7i_A 240 LESLIVRLLFADTAVAAVVTGRPRP----E-SVLRLDAAWHHTLPGTRDLHRLETRADGTHFVMDRRGPRAVQETVTAMW 314 (413)
T ss_dssp TTHHHHHHHBCCEEEEEEEESSCCT----T-EEEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHH
T ss_pred hhhhhcceeeccccEEEEEEecCCC----C-CCEEEEccccEEeCCCccccCccccCCceEEEECcHHHHHHHHHHHHHH
Confidence 2 5789999999999864320 1 112344443211110000 00111 123457888
Q ss_pred HHHH------HcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHc--CCC-Ccc-cccccccccccccchhHHHHHHHHH
Q 008146 449 KALA------HSGVSREDVNYINAHATSTPAGDIKEYQALIHCFG--QNR-GLR-VNSTKSMIGHLLGAAGAVEAIAVVQ 518 (576)
Q Consensus 449 ~AL~------~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~--~~~-~~~-v~s~K~~iGH~~gAsG~~~li~~~l 518 (576)
++|+ ++|++ ||++..|-.+.. -.+++.+.++ -.. ++. ...+-. +||+.+|+=.+.|-.++
T Consensus 315 ~~L~~~~~~~~~gl~---id~~v~Hq~~~~-----il~~v~~~Lg~~l~~ek~~~s~~~l~-~GNtssAsi~~~L~~~~- 384 (413)
T 3v7i_A 315 EWLRVRYEDDPSSWH---PDVLLAHPGGTR-----VLEYMEQTMPDEWPSGLLSYSRDSYT-SGNRGGAAVFDILRRAH- 384 (413)
T ss_dssp HHHHHHTSSSCTTCC---CCEEEEECSSHH-----HHHHHHHHSCSSCCSCSTHHHHHHHT-TCBCGGGHHHHHHHHHH-
T ss_pred HHHhhccccccCCCc---eeEEEECCCChH-----HHHHHHHHhCCCCCHHHhhccceEec-eeChHHHHHHHHHHHHH-
Confidence 9999 89987 999999966554 3456666777 332 221 122334 89999887665554443
Q ss_pred HHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEe
Q 008146 519 AIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573 (576)
Q Consensus 519 ~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~ 573 (576)
+ +.+. +-..++..+||.|=+-..++++
T Consensus 385 --~-~~~~-------------------------~Gd~vll~~fG~Glt~~~~ll~ 411 (413)
T 3v7i_A 385 --D-AGQK-------------------------TGSRAVLYAAAPGLTATALEGE 411 (413)
T ss_dssp --H-HCCC-------------------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred --h-CCCC-------------------------CCCEEEEEEECHHHhHhhhheE
Confidence 2 2220 1134667799988888888875
|
| >2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.35 E-value=1.2e-11 Score=133.70 Aligned_cols=225 Identities=16% Similarity=0.182 Sum_probs=140.1
Q ss_pred cEEEEecceecCCC-CCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 008146 166 RVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 244 (576)
Q Consensus 166 ~IaItGmg~~~P~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa~ 244 (576)
.|.|.|+|..+|.- .+.+++.+.. |.+. .|-.... | +..+ .+..+. .....|+.+|+.
T Consensus 24 ~vgI~aig~y~P~~~v~~~el~~~~--g~~~-----~~~~~~~-----G-i~~r---~~~~~~-----e~~~~La~~Aa~ 82 (478)
T 2p8u_A 24 DVGIVALEIYFPSQYVDQAELEKYD--GVDA-----GKYTIGL-----G-QAKM---GFCTDR-----EDINSLCMTVVQ 82 (478)
T ss_dssp CCEEEEEEEECCSEEEEHHHHHHHH--TCCT-----TCCCCCC-----C-CCEE---ECCCTT-----CCHHHHHHHHHH
T ss_pred ceEEEEEEEECCCeEecHHHHHHHh--CCCh-----hHheccc-----C-ceEE---EeCCCC-----CCHHHHHHHHHH
Confidence 48899999999986 6777766543 2211 1100000 0 0100 001111 124689999999
Q ss_pred HHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCC---CC-cc
Q 008146 245 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGW---MG-PN 320 (576)
Q Consensus 245 eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl---~G-p~ 320 (576)
+||+++|+++++|+ .|++++..+. ......+..++..|++ .. +.
T Consensus 83 ~aL~~agi~~~dId-------~li~~T~t~~-------------------------~~~ps~a~~v~~~L~~lG~~~~~~ 130 (478)
T 2p8u_A 83 NLMERNNLSYDCIG-------RLEVGTETII-------------------------DKSKSVKTNLMQLFEESGNTDIEG 130 (478)
T ss_dssp HHHHHTTCCGGGEE-------EEEEECSCCS-------------------------CSSSCHHHHHGGGTTTTTCCCCBC
T ss_pred HHHHHcCCCHHHCC-------EEEEEccCCc-------------------------ccCccHHHHHHHHHhhcCCCCceE
Confidence 99999999997665 5777775421 1123456677755544 43 78
Q ss_pred ccccCCCchHHHHHHHHHHHHHcCC--CCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCc
Q 008146 321 YSISTACATSNFCILNAANHIIRGE--ANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEG 398 (576)
Q Consensus 321 ~tv~taCaSgl~AL~~A~~~I~~G~--~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEG 398 (576)
+.|..+|++++.||..|.++|++|. .+.|||+|+|... |.......+.|||
T Consensus 131 ~dv~~aC~gg~~AL~~A~~~i~sg~~~~~~aLVV~~Eia~---------------------------~~~~~~~~~fGdG 183 (478)
T 2p8u_A 131 IDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDIAV---------------------------YATGNARPTGGVG 183 (478)
T ss_dssp CEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEEC---------------------------CCSSTTGGGCEEE
T ss_pred EEEcchhHHHHHHHHHHHHHHHcCCccCCEEEEEEeeeec---------------------------ccCCCCCCcccce
Confidence 8899999999999999999999999 9999999999410 1112234679999
Q ss_pred eEEEEEcchHHHHhcCCeeeE-EEEEEEEecCCCCCCCCC-------CChHH--------H---HHHHHHHHH-------
Q 008146 399 AGVLLLEELEHAKKRGAKIYA-EFRGGSFTSDAYHMTEPH-------PDGVG--------V---ILCIEKALA------- 452 (576)
Q Consensus 399 AaalvL~~~~~A~~~g~~i~a-~I~g~~~~~dg~~~~~~~-------p~~~~--------~---~~ai~~AL~------- 452 (576)
|+|+||++.+. -++. .+.|..+ .+......|. -++.. + ...+++.++
T Consensus 184 A~A~Ll~~~~~------~~l~~~~~gs~~-~~~~d~~~p~~~~~~~~~dG~~s~~~y~~a~~~~~~~~~~~l~~~~~~~~ 256 (478)
T 2p8u_A 184 AVALLIGPNAP------LIFERGLRGTHM-QHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKIHAQWQKEG 256 (478)
T ss_dssp EEEEEEESSCS------EEECTTCCEEEE-CCCCSEECCCTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEecCCC------ceEeeccceecc-cchhheeeecCCCcceEEcCcchHHHHHHHHHHHHHHHHHHHhhhccccc
Confidence 99999986421 0100 0122221 1222111111 12211 1 134566666
Q ss_pred -HcCCCCCCccEEEecCCCCccCcHH
Q 008146 453 -HSGVSREDVNYINAHATSTPAGDIK 477 (576)
Q Consensus 453 -~Agl~~~dId~ve~Hgtgt~~gD~~ 477 (576)
++|++++||||+..|-.+..+.+..
T Consensus 257 ~~~g~~~~did~~v~H~~~~ki~~~~ 282 (478)
T 2p8u_A 257 NDKDFTLNDFGFMIFHSPYCKLVQKS 282 (478)
T ss_dssp CCCCCCGGGCSEEEECCSSHHHHHHH
T ss_pred cccCCChHHcCEEEecCCcHHHHHHH
Confidence 6799999999999999888766554
|
| >2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.3e-09 Score=117.45 Aligned_cols=224 Identities=14% Similarity=0.126 Sum_probs=133.4
Q ss_pred CcEEEEecceecCCC-CCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 008146 165 KRVVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 243 (576)
Q Consensus 165 ~~IaItGmg~~~P~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa 243 (576)
+.|-|.|+|..+|.- .+.+++-+.+ |.+ +.| +..+. | +.. ..+.++.| ....|+.+|+
T Consensus 4 ~~VgI~~~g~y~P~~~v~~~~l~~~~--~~~-----~~~----i~~~~-G-i~~---r~~~~~~E-----~~~~ma~~Aa 62 (460)
T 2wya_A 4 KDVGILALEVYFPAQYVDQTDLEKYN--NVE-----AGK----YTVGL-G-QTR---MGFCSVQE-----DINSLCLTVV 62 (460)
T ss_dssp SSCEEEEEEEECCSEEEEHHHHHHHT--TCC-----TTC----CCCCC-C-CCE---EECCCTTC-----CHHHHHHHHH
T ss_pred CceEEEEEEEECCCeEEcHHHHHHHh--CCC-----HHH----HHHhh-C-cEE---EEECCCCC-----CHHHHHHHHH
Confidence 358999999999998 6667765432 211 111 10000 0 000 00011111 2356999999
Q ss_pred HHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCCCC----c
Q 008146 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG----P 319 (576)
Q Consensus 244 ~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G----p 319 (576)
.+||+++|+++++|+ -|++++..+. ......+..+...||+.| +
T Consensus 63 ~~al~~a~i~~~~Id-------~ii~aT~t~~-------------------------~~~ps~a~~v~~~l~~~g~~~~~ 110 (460)
T 2wya_A 63 QRLMERIQLPWDSVG-------RLEVGTETII-------------------------DKSKAVKTVLMELFQDSGNTDIE 110 (460)
T ss_dssp HHHHHHHTCCGGGEE-------EEEEECSCCS-------------------------CSSSCHHHHHGGGTGGGTCCCCB
T ss_pred HHHHHHcCCCHHHCC-------EEEEEeCCCC-------------------------CCCCchHHHHHHHHhccCCCCee
Confidence 999999999998665 4778875421 123345778888887654 4
Q ss_pred cccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCce
Q 008146 320 NYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGA 399 (576)
Q Consensus 320 ~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGA 399 (576)
++-+..+|++++.||..|.++|++|..+.++++.+...+.. |.........|+||
T Consensus 111 a~D~~~aC~g~~~al~~A~~~i~~g~~~~~lvvv~~s~~~~-------------------------~~d~~~~~~~GdGA 165 (460)
T 2wya_A 111 GIDTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGDIAV-------------------------YPSGNARPTGGAGA 165 (460)
T ss_dssp CCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEEC-------------------------CCSSTTGGGCEEEE
T ss_pred EechhhhhhhHHHHHHHHHHHHHhccccceEEEEEeccccc-------------------------cccccccccCcchH
Confidence 57789999999999999999999998764443333221110 22233455679999
Q ss_pred EEEEEcchHHHHhcCCeeeEE--EEEEEEecCCCC-----CCC--CCCChHH-------------------HHHHHHHHH
Q 008146 400 GVLLLEELEHAKKRGAKIYAE--FRGGSFTSDAYH-----MTE--PHPDGVG-------------------VILCIEKAL 451 (576)
Q Consensus 400 aalvL~~~~~A~~~g~~i~a~--I~g~~~~~dg~~-----~~~--~~p~~~~-------------------~~~ai~~AL 451 (576)
+|++++..+. +... ..+.... +... ... +..++.. ...++++++
T Consensus 166 ~A~l~~~~~~-------~~~~~~~~~~~~~-~~~df~~p~~~s~~~~~dg~~s~~~~~~~g~~v~~~~~~~~~~~~~~~l 237 (460)
T 2wya_A 166 VAMLIGPKAP-------LALERGLRGTHME-NVYDFYKPNLASEYPIVDGKLSIQCYLRALDRCYTSYRKKIQNQWKQAG 237 (460)
T ss_dssp EEEEEESSCS-------EEECTTCCEEEEC-CCCSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HhhhcccCCc-------ceeeccccccccc-chhhhhccCCCCCCcccCCccchHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 9999986321 1110 1122111 1111 111 1112211 123455566
Q ss_pred HHcCCCCCCccEEEecCCCCccC
Q 008146 452 AHSGVSREDVNYINAHATSTPAG 474 (576)
Q Consensus 452 ~~Agl~~~dId~ve~Hgtgt~~g 474 (576)
+++|++++|+|++..|-....+.
T Consensus 238 ~~~~~~~~d~d~~v~Hqp~~r~~ 260 (460)
T 2wya_A 238 SDRPFTLDDLQYMIFHTPFCKMV 260 (460)
T ss_dssp CCCCCCGGGCSEEEECCSSHHHH
T ss_pred HHcCCCHHHHhhhhhcccchHHH
Confidence 77899999999999998776543
|
| >2ju1_A Erythronolide synthase; carrier protein domain, modular polyketide synthase, alpha- helical bundle, acyltransferase; NMR {Saccharopolyspora erythraea} PDB: 2ju2_A | Back alignment and structure |
|---|
Probab=97.96 E-value=1.9e-06 Score=71.50 Aligned_cols=50 Identities=12% Similarity=0.041 Sum_probs=46.8
Q ss_pred CchhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 77 SSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 77 ~~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
.+..|.+| +|||.++||+++|.+.+|++ +|.+.+|+|||+.+++.++..+
T Consensus 43 ~~~~f~~lG~DSL~a~~l~~~l~~~~g~~-----l~~~~l~~~~ti~~la~~l~~~ 93 (95)
T 2ju1_A 43 ATTPFKELGFDSLAAVRLRNLLNAATGLR-----LPSTLVFDHPNASAVAGFLDAE 93 (95)
T ss_dssp SSSCHHHHTCSSHHHHHHHHHHGGGTSSC-----CCTTHHHHCSSHHHHHHHHHHH
T ss_pred CCCCHHHcCCcHHHHHHHHHHHHHHHCCC-----CChhHHhcCCCHHHHHHHHHHH
Confidence 46789999 99999999999999999999 9999999999999999998765
|
| >2cg5_B Fatty acid synthase; transferase-hydrolase complex, transferase/hydrolase (comple fatty acid biosynthesis, phosphopantetheine transferase; HET: COA; 2.7A {Homo sapiens} PDB: 2png_A | Back alignment and structure |
|---|
Probab=97.95 E-value=9.8e-07 Score=72.62 Aligned_cols=48 Identities=6% Similarity=0.009 Sum_probs=42.5
Q ss_pred chhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 78 SHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 78 ~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
..+|.+| ||||++|||||+|.+.+|++ ||.+.+|. +|+.+|+......
T Consensus 30 ~~~l~dLG~DSL~aVELr~~Le~~fgi~-----lp~~~l~~-~Ti~~La~~v~~~ 78 (91)
T 2cg5_B 30 DSSLADLGLDALMSVEVRQTLERELNLV-----LSVREVRQ-LTLRKLQELSSKA 78 (91)
T ss_dssp TSBTTTTTCCHHHHHHHHHHHHHHHCCC-----CCHHHHHT-CBHHHHHHHHHCC
T ss_pred CCCHHHhCCcchHHHHHHHHHHHHHCCC-----CCHHHHHh-CCHHHHHHHHhcc
Confidence 5789999 99999999999999999999 99999998 5888877765544
|
| >2afd_A Protein ASL1650; twisted antiparallel helical bundle, acyl carrier protein FA structural genomics, PSI, protein structure initiative; NMR {Nostoc SP} PDB: 2afe_A | Back alignment and structure |
|---|
Probab=97.74 E-value=1.2e-05 Score=65.41 Aligned_cols=50 Identities=8% Similarity=-0.062 Sum_probs=46.6
Q ss_pred CchhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 77 SSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 77 ~~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
....|.+| +|||.++||+++|...+|++ +|.+.+|+|||+..++.++..+
T Consensus 36 ~~~~~~~lG~DSl~~~~l~~~l~~~~~~~-----i~~~~~~~~~ti~~la~~l~~~ 86 (88)
T 2afd_A 36 MEESFDNYDLNSSKALILLGRLEKWLGKE-----LNPVLIFNYPTIAQLAKRLGEL 86 (88)
T ss_dssp TTSCGGGTTCCSTHHHHHHHHHHHHTTSC-----CCGGGTTTCCSHHHHHHHHHHH
T ss_pred CCCCHHHcCccHHHHHHHHHHHHHHHCCC-----cCHHHHHhCCCHHHHHHHHHHH
Confidence 46789999 99999999999999999999 9999999999999999988765
|
| >2kr5_A PKS, aflatoxin biosynthesis polyketide synthase; acyl carrrier protein, holo, phosphopantetheine, transport protein; HET: PNS; NMR {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=97.56 E-value=2.3e-05 Score=63.95 Aligned_cols=50 Identities=10% Similarity=0.035 Sum_probs=45.8
Q ss_pred CchhhhHh-hhcccccccchhhhhhhcCccccCCCCc--ccccCCCChhHHHHHHHHH
Q 008146 77 SSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGF--SSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 77 ~~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~--t~~Fd~pt~~al~~~~~~~ 131 (576)
....|.+| +|||.++||+++|...+|++ +|. +.+|+|||+..++.++...
T Consensus 33 ~~~~~~~lG~DSL~~~~l~~~l~~~~g~~-----l~~~~~~l~~~~Tv~~la~~l~~~ 85 (89)
T 2kr5_A 33 DDSNFADMGIDSLSSMVIGSRFREDLGLD-----LGPEFSLFIDCTTVRALKDFMLGS 85 (89)
T ss_dssp TTCBHHHHTCCHHHHHHHHHHHHHTTCCC-----CCSSCCTTTSCCBHHHHHHHHHTT
T ss_pred CCCCHHHcCccHHHHHHHHHHHHHHHCCC-----CCchHHHHHcCCCHHHHHHHHHHh
Confidence 46789999 99999999999999999999 999 9999999999999887653
|
| >4i4d_A Peptide synthetase NRPS type II-PCP; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MLY; 2.10A {Streptomyces verticillus} | Back alignment and structure |
|---|
Probab=97.54 E-value=1e-05 Score=66.92 Aligned_cols=51 Identities=10% Similarity=0.071 Sum_probs=47.4
Q ss_pred CCchhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 76 GSSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 76 ~~~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
+....|-+| .|||++++|.++|+..+|++ +|.+.+|+|||+..++.++...
T Consensus 35 ~~~~~Ff~lGgdSL~a~~l~~~l~~~~g~~-----l~~~~l~~~pTi~~la~~l~~~ 86 (93)
T 4i4d_A 35 GPHEDFAALGGNSIHAIXITNRVEELVDAE-----LSIRVLLETRTVAGMTDHVHAT 86 (93)
T ss_dssp CTTCCTTTTTCCHHHHHHHHHHHHHHHTSC-----CCHHHHHHHCSHHHHHHHHHHH
T ss_pred CCCCCHHHcCCcHHHHHHHHHHHHHHhCCC-----CCHHHHHcCCCHHHHHHHHHHH
Confidence 346788899 99999999999999999999 9999999999999999999876
|
| >1nq4_A Oxytetracycline polyketide synthase acyl carrier protein; solution structure, dynamics, ACP, biosynthetic protein; NMR {Streptomyces rimosus} SCOP: a.28.1.1 | Back alignment and structure |
|---|
Probab=97.48 E-value=3.8e-05 Score=63.82 Aligned_cols=51 Identities=10% Similarity=0.040 Sum_probs=47.4
Q ss_pred CchhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHHh
Q 008146 77 SSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRRL 132 (576)
Q Consensus 77 ~~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~~ 132 (576)
.+..|.+| +|||..+||..+|...+|++ +|.+.+|++||+..++.++..+.
T Consensus 30 ~d~~~~dlG~DSL~~vel~~~le~~fgi~-----i~~~~l~~~~Tv~~l~~~i~~~~ 81 (95)
T 1nq4_A 30 EDVAFDALGYDSLALLNTVGRIERDYGVQ-----LGDDAVEKATTPRALIEMTNASL 81 (95)
T ss_dssp SSSCHHHHTCCSHHHHHHHHHHHHHTCCC-----SCTTHHHHCCSHHHHHHHHHHHH
T ss_pred CCCChhhhCCCHHHHHHHHHHHHHHHCCc-----cCHHHHHcCCCHHHHHHHHHHHH
Confidence 36788999 99999999999999999999 99999999999999999998773
|
| >2liu_A CURA; holo state, transferase; NMR {Lyngbya majuscula} PDB: 2liw_A* | Back alignment and structure |
|---|
Probab=97.43 E-value=2.7e-05 Score=64.80 Aligned_cols=50 Identities=6% Similarity=-0.057 Sum_probs=46.8
Q ss_pred CchhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 77 SSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 77 ~~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
....|.+| +|||.++||+++|...+|+. +|.+.+|++||+..++.++..+
T Consensus 43 ~~~~~~~lG~DSl~~~~l~~~l~~~~g~~-----l~~~~l~~~~ti~~la~~l~~~ 93 (99)
T 2liu_A 43 EDQKFVDLGLDSIVGVEWTTTINQTYNLN-----LKATKLYDYPTLLELSGYIAQI 93 (99)
T ss_dssp SSSCHHHHTCCHHHHHHHHHHHHHHHTCC-----CCHHHHHHCCSHHHHHHHHHHH
T ss_pred CCCCHHHhCccHHHHHHHHHHHHHHHCCC-----cCHHHHHhCCCHHHHHHHHHHH
Confidence 46789999 99999999999999999999 9999999999999999998876
|
| >2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=97.41 E-value=5.4e-05 Score=72.52 Aligned_cols=50 Identities=8% Similarity=-0.067 Sum_probs=47.2
Q ss_pred CchhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 77 SSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 77 ~~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
.+..|.+| +|||.++||+++|++.+|+. +|.+.+|+|||+..|+.++...
T Consensus 48 ~~~~f~~lG~DSl~~~el~~~l~~~~g~~-----l~~~~~~~~~Ti~~la~~l~~~ 98 (212)
T 2l22_A 48 DGSRFLELGLDSVIAAQWIREINKHYQLK-----IPADGIYTYPVFKAFTQWVGTQ 98 (212)
T ss_dssp TTCBHHHHTCCHHHHHHHHHHHHHHTTCC-----CCTTHHHHCCBHHHHHHHHHTT
T ss_pred CCCCHHHhCCcHHHHHHHHHHHHHHHCCC-----CCHHHHHcCCCHHHHHHHHHHh
Confidence 46789999 99999999999999999999 9999999999999999999876
|
| >1dny_A Non-ribosomal peptide synthetase peptidyl carrier protein; four-helix bundle, modular enzyme, domain, flexible region; NMR {Brevibacillus brevis} SCOP: a.28.1.2 PDB: 2gdw_A 2gdx_A 2gdy_A 2k2q_A | Back alignment and structure |
|---|
Probab=97.19 E-value=4.1e-05 Score=63.00 Aligned_cols=50 Identities=8% Similarity=-0.049 Sum_probs=45.0
Q ss_pred CchhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 77 SSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 77 ~~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
....|-+| .|||++++|+++|++.+|+. +|...+|++||+.+++.++...
T Consensus 34 ~~~~Ff~lGgdSL~a~~l~~~l~~~~g~~-----l~~~~l~~~~Ti~~la~~i~~~ 84 (91)
T 1dny_A 34 ILDNFFQIGGHSLKAMAVAAQVHREYQVE-----LPLKVLFAQPTIKALAQYVATR 84 (91)
T ss_dssp SSCCTTSSCCSSHHHHHHHHHHHHHCCCC-----CCHHHHHHSCSHHHHHHHHHC-
T ss_pred CCCCHHHcCCCHHHHHHHHHHHHHHHCCC-----CCHHHHHcCCCHHHHHHHHHHh
Confidence 46778899 99999999999999999999 9999999999999999887654
|
| >2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=96.97 E-value=0.00026 Score=67.64 Aligned_cols=50 Identities=14% Similarity=0.025 Sum_probs=46.8
Q ss_pred CchhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 77 SSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 77 ~~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
....|.+| +|||.++||+++|...+|+. +|.+.+|+|||+..|+.++..+
T Consensus 152 ~~~~f~~lG~DSl~a~el~~~l~~~~g~~-----l~~~~l~~~~Ti~~La~~l~~~ 202 (212)
T 2l22_A 152 SGAQFLDLGMDSVTGTQWMRGVSRHFSIQ-----LAADAIYTWPTLKSLADEVDRR 202 (212)
T ss_dssp SSCCGGGGCSSSHHHHHHHHHHHHHTTCC-----CCGGGGGGCCSHHHHHHHHHHH
T ss_pred CCCCHHHhCCCHHHHHHHHHHHHHHHCCC-----cCHHHHHcCCCHHHHHHHHHHH
Confidence 35678899 99999999999999999999 9999999999999999999877
|
| >2l3v_A ACP, acyl carrier protein; structural genomi seattle structural genomics center for infectious disease, lipid binding protein; NMR {Brucella melitensis} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.00036 Score=55.26 Aligned_cols=50 Identities=8% Similarity=-0.116 Sum_probs=45.6
Q ss_pred Cchhh-hHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 77 SSHSI-QSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 77 ~~~~~-~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
.+..| .+| +|||.++||.++|...+|++ +|...+|++||+..+++++..+
T Consensus 26 ~~~~l~~~lG~DSl~~~~l~~~le~~fgi~-----i~~~~~~~~~Tv~~l~~~i~~~ 77 (79)
T 2l3v_A 26 EGASFIDDLGADSLDTVELVMAFEEEFGVE-----IPDDAAETILTVGDAVKFIDKA 77 (79)
T ss_dssp TTCCHHHHTCCCSSSSSSTTTTHHHHTTCC-----CCHHHHTTCSSSSTTHHHHHHT
T ss_pred CCCccccccCCCHHHHHHHHHHHHHHHCCC-----CCHHHHHHcCCHHHHHHHHHHh
Confidence 35678 899 99999999999999999999 9999999999999999888765
|
| >1l0i_A Acyl carrier protein; acyl chain binding, fatty acid biosynt lipid transport; HET: PSR; 1.20A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ny7_B* 2fhs_C 1l0h_A* 1acp_A 1t8k_A 2fac_A* 2fad_A* 2fae_A* 2k92_A 2k93_A 2k94_A 2l0q_A | Back alignment and structure |
|---|
Probab=96.86 E-value=0.00021 Score=56.59 Aligned_cols=49 Identities=10% Similarity=-0.076 Sum_probs=44.8
Q ss_pred chhh-hHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 78 SHSI-QSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 78 ~~~~-~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
+..| .+| +|||.++||.++|...+|++ +|...+|.+||+..++.++..+
T Consensus 26 ~~~l~~dlG~DSl~~~el~~~le~~fgi~-----i~~~~l~~~~Tv~~l~~~i~~~ 76 (78)
T 1l0i_A 26 NASFVEDLGADSLDTVELVMALEEEFDTE-----IPDEEAEKMTTVQAAIDYINGH 76 (78)
T ss_dssp TCBTTTTSCCCHHHHHHHHHHHHHHHTCC-----CCHHHHTTCCBHHHHHHHHHHT
T ss_pred CcchhhhcCCCHHHHHHHHHHHHHHhCCC-----CCHHHHHHcCCHHHHHHHHHHh
Confidence 5677 699 99999999999999999999 9999999999999999888765
|
| >2ava_A ACP I, acyl carrier protein I, chloroplast; four-helix-bundle, biosynthetic protein; NMR {Spinacia oleracea} PDB: 2fva_A* 2fve_A 2fvf_A* 2xz0_D* 2xz1_C* | Back alignment and structure |
|---|
Probab=96.81 E-value=0.00044 Score=55.29 Aligned_cols=49 Identities=6% Similarity=-0.147 Sum_probs=45.3
Q ss_pred chhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 78 SHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 78 ~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
+..|.+| +|||.++||.++|...+|++ +|...+|.++|+..++.++...
T Consensus 28 ~~~l~dlG~DSl~~vel~~~le~~fgi~-----i~~~~~~~~~Tv~~l~~~i~~~ 77 (82)
T 2ava_A 28 DSEFSKLGADSLDTVEIVMNLEEEFGIN-----VDEDKAQDISTIQQAADVIEGL 77 (82)
T ss_dssp SCCSCCCTTCCSCHHHHHHHHHHHTTCC-----CCGGGSSSCCSHHHHHHHHHHH
T ss_pred CCchhhcCCCHHHHHHHHHHHHHHHCCc-----cCHHHHHhCCCHHHHHHHHHHH
Confidence 5677799 99999999999999999999 9999999999999999988766
|
| >2dnw_A Acyl carrier protein; ACP, fatty acid biosynthesis, mitochondria, NADH:ubiquinone oxidereductase, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.00023 Score=59.36 Aligned_cols=49 Identities=6% Similarity=-0.166 Sum_probs=45.7
Q ss_pred chhh-hHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 78 SHSI-QSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 78 ~~~~-~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
+..| .+| +|||..+||.++|...+|++ +|...+|+++|+..++.++..+
T Consensus 38 d~~l~~dlG~DSL~~vel~~~le~~fgi~-----i~~~~l~~~~Tv~~l~~~i~~~ 88 (99)
T 2dnw_A 38 NSHFMKDLGLDSLDQVEIIMAMEDEFGFE-----IPDIDAEKLMCPQEIVDYIADK 88 (99)
T ss_dssp TCCCCCCCCCCHHHHHHHHHHHHHHTTCC-----CCHHHHTTCCSHHHHHHHHHHH
T ss_pred CCchhhhcCCCHHHHHHHHHHHHHHHCCC-----CCHHHHHhCCCHHHHHHHHHHH
Confidence 4567 699 99999999999999999999 9999999999999999999887
|
| >1or5_A Acyl carrier protein; ACP, biosynthesis, frenolicin, holo, polyketide synthase, PKS, biosynthetic protein; NMR {Streptomyces roseofulvus} SCOP: a.28.1.1 | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0002 Score=57.49 Aligned_cols=49 Identities=8% Similarity=-0.069 Sum_probs=45.0
Q ss_pred chhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 78 SHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 78 ~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
+..|.+| +|||.++||+++|...+|++ +|...+|+++|+..++.++..+
T Consensus 30 ~~~~~dlG~DSL~~vel~~~le~~fgi~-----i~~~~~~~~~Tv~~l~~~i~~~ 79 (83)
T 1or5_A 30 DTPFVDLGYDSLALLETAAVLQQRYGIA-----LTDETVGRLGTPRELLDEVNTT 79 (83)
T ss_dssp SSCHHHHSCCHHHHHHHHHHHHTTSCCC-----CSHHHHHHCCCSHHHHHHHTTC
T ss_pred CCcHHHhCCCHHHHHHHHHHHHHHHCCc-----cCHHHHhccCCHHHHHHHHHHH
Confidence 4569999 99999999999999999999 9999999999999999888654
|
| >2ehs_A ACP, acyl carrier protein; lipid transport, structural genomics, NPPSFA, national proje protein structural and functional analyses; 1.30A {Aquifex aeolicus} PDB: 2eht_A | Back alignment and structure |
|---|
Probab=96.76 E-value=0.00027 Score=55.59 Aligned_cols=50 Identities=8% Similarity=-0.087 Sum_probs=45.7
Q ss_pred Cchhh-hHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 77 SSHSI-QSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 77 ~~~~~-~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
.+..| .+| +|||.++||+++|...+|++ +|...+|++||...++.++...
T Consensus 23 ~~~~l~~~lG~DSl~~~~l~~~le~~~gi~-----i~~~~~~~~~tv~~l~~~i~~~ 74 (77)
T 2ehs_A 23 PEAKFVEDLGADSLDVVELIMAFEEEFGIE-----IPDEDAEKIQTVGDVINYLKEK 74 (77)
T ss_dssp TTCBTTTTTCCCHHHHHHHHHHHHHHHTCC-----CCHHHHHTCCBHHHHHHHHHHH
T ss_pred CccchhhccCCCHHHHHHHHHHHHHHhCCc-----cCHHHHHHcCCHHHHHHHHHHH
Confidence 35678 899 99999999999999999999 9999999999999999988765
|
| >2lol_A ACP, acyl carrier protein; lipid transport; NMR {Rickettsia prowazekii str} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.00053 Score=54.60 Aligned_cols=49 Identities=8% Similarity=-0.115 Sum_probs=44.9
Q ss_pred chhh-hHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 78 SHSI-QSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 78 ~~~~-~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
+..| .+| +|||.++||.++|...+|++ +|...+|.++|+..++.++..+
T Consensus 29 ~~~l~~dlG~DSl~~~el~~~le~~fgi~-----i~~~~~~~~~Tv~~l~~~i~~~ 79 (81)
T 2lol_A 29 DSRFIEDLKADSLDTVELMMAIEVEYGID-----IPDDEATKIKTVSDVIKYIKER 79 (81)
T ss_dssp TCCHHHHTTCCHHHHHHHHHHHHHHHCCC-----CCGGGGGGSSSHHHHHHHHHHH
T ss_pred CCcHHHhcCCcHHHHHHHHHHHHHHHCCC-----CCHHHHHHcCCHHHHHHHHHHh
Confidence 5567 799 99999999999999999999 9999999999999999888765
|
| >1af8_A Actinorhodin polyketide synthase acyl carrier Pro; acyl carrier protein, solution STR antibiotic biosynthesis; NMR {Streptomyces coelicolor} SCOP: a.28.1.1 PDB: 2af8_A 2k0x_A* 2k0y_A 2kg6_A* 2kg8_A* 2kg9_A* 2kga_A* 2kgc_A* 2kgd_A* 2kge_A* | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0006 Score=55.06 Aligned_cols=49 Identities=8% Similarity=-0.093 Sum_probs=45.8
Q ss_pred chhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 78 SHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 78 ~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
+..|.+| +|||..+||+++|...+|++ +|...+++++|+..++.++..+
T Consensus 32 ~~~l~dlG~DSL~~vel~~~le~~fgi~-----i~~~~~~~~~Tv~~l~~~i~~~ 81 (86)
T 1af8_A 32 DLRFEDIGYDSLALMETAARLESRYGVS-----IPDDVAGRVDTPRELLDLINGA 81 (86)
T ss_dssp TTSTTTTTCCTTTHHHHHHHHTTTTCSC-----CCTTTTTTCCSHHHHHHHHHHH
T ss_pred CCChhhcCCCHHHHHHHHHHHHHHHCCC-----cCHHHHHcCCCHHHHHHHHHHH
Confidence 5678899 99999999999999999999 9999999999999999998876
|
| >1x3o_A Acyl carrier protein; structural genomics, riken structural genomics/proteomics in RSGI, NPPSFA; 1.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.57 E-value=0.00037 Score=55.23 Aligned_cols=50 Identities=6% Similarity=-0.146 Sum_probs=45.5
Q ss_pred Cchhh-hHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 77 SSHSI-QSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 77 ~~~~~-~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
.+..| .+| +|||.++||.++|...+|++ +|...+|+++|+..++.++..+
T Consensus 27 ~~~~l~~~lG~DSl~~~~l~~~le~~fgi~-----i~~~~~~~~~Tv~~l~~~i~~~ 78 (80)
T 1x3o_A 27 LEARFIEDLGADSLDTVELIMGLEDEFGLE-----ISDEEAEKIRTVKDAVEYIKAK 78 (80)
T ss_dssp TTCBTTTTTCCCHHHHHHHHHHHHHHHCCC-----CCHHHHHHCCBHHHHHHHHHHH
T ss_pred CcCcHHhhcCccHHHHHHHHHHHHHHHCCC-----cCHHHHHHcCCHHHHHHHHHHH
Confidence 35678 899 99999999999999999999 9999999999999999888765
|
| >1klp_A ACP, ACPM, meromycolate extension acyl carrier protein; four-helix bundle, ligand transport; NMR {Mycobacterium tuberculosis} SCOP: a.28.1.1 | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0021 Score=55.05 Aligned_cols=49 Identities=12% Similarity=-0.025 Sum_probs=45.8
Q ss_pred chhh-hHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 78 SHSI-QSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 78 ~~~~-~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
+..| .+| +|||..+||.++|...+|++ +|...+|+++|+..++.++...
T Consensus 30 d~~l~~dlG~DSL~~vel~~~lE~~fgi~-----i~~~~l~~~~Tv~~l~~~i~~~ 80 (115)
T 1klp_A 30 EKSFVDDLDIDSLSMVEIAVQTEDKYGVK-----IPDEDLAGLRTVGDVVAYIQKL 80 (115)
T ss_dssp TCCTTTTTCSHHHHHHHHHHHHHHHTCCC-----CCHHHHTTCCSHHHHHHHHHHH
T ss_pred CCchhhccCCCHHHHHHHHHHHHHHHCCC-----CCHHHHHcCCCHHHHHHHHHHH
Confidence 5667 799 99999999999999999999 9999999999999999999887
|
| >2cnr_A FAS, ACP, acyl carrier protein; polykdetide, phosphopantetheine, lipid transport; NMR {Streptomyces coelicolor} PDB: 2koo_A* 2kop_A* 2koq_A* 2kor_A* 2kos_A* | Back alignment and structure |
|---|
Probab=96.42 E-value=0.00091 Score=53.26 Aligned_cols=49 Identities=8% Similarity=-0.132 Sum_probs=44.4
Q ss_pred chhh-hHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 78 SHSI-QSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 78 ~~~~-~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
+..| .+| +|||.++||.++|...+|++ +|...+|.++|+..++.++..+
T Consensus 30 ~~~l~~dlG~DSl~~~~l~~~le~~fgi~-----i~~~~~~~~~Tv~~l~~~i~~~ 80 (82)
T 2cnr_A 30 DKSFTDDLDVDSLSMVEVVVAAEERFDVK-----IPDDDVKNLKTVGDATKYILDH 80 (82)
T ss_dssp TSBTTTTSCCCHHHHHHHHHHHHGGGTBC-----CCGGGGGTCSBHHHHHHHHHHS
T ss_pred CcchhhccCCChHHHHHHHHHHHHHhCCC-----CCHHHHHHcCCHHHHHHHHHHH
Confidence 4566 699 99999999999999999999 9999999999999999887654
|
| >2cq8_A 10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH, PP-binding, acyl carrier protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.25 E-value=0.0011 Score=56.19 Aligned_cols=51 Identities=10% Similarity=-0.086 Sum_probs=46.8
Q ss_pred CCchhhhHh-hhcccccccchhhhhhhc-CccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 76 GSSHSIQSL-MASCLPFEPCNEYYSSVS-SLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 76 ~~~~~~~~~-~dsl~avel~n~l~~~~g-~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
+....|-+| =|||+++.|..||+..+| +. +|...||+|||+.++++++.+.
T Consensus 45 ~~~ddFF~lGG~SLla~rLv~~ir~~~g~v~-----l~l~~Lf~~pTl~~lA~~l~~~ 97 (110)
T 2cq8_A 45 EDSTDFFKSGAASVDVVRLVEEVKELCDGLE-----LENEDVYMASTFGDFIQLLVRK 97 (110)
T ss_dssp CTTCBHHHHHCCTTHHHHHHHHHHHHHTSCC-----CCHHHHHHCCBHHHHHHHHHHH
T ss_pred CCCCCHHhcCChHHHHHHHHHHHHHHcCCCC-----cCHHHHHhCCCHHHHHHHHHHH
Confidence 356788899 999999999999999999 88 9999999999999999999876
|
| >2qnw_A Acyl carrier protein; malaria, SGC, structural genomics CONS fatty acid biosynthesis, lipid synthesis, phosphopantethein transit peptide; 1.90A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=96.21 E-value=0.0013 Score=52.60 Aligned_cols=49 Identities=8% Similarity=-0.060 Sum_probs=45.1
Q ss_pred chhh-hHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 78 SHSI-QSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 78 ~~~~-~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
+..| .+| +|||..+||.++|...+|++ +|...++.++|...++.++..+
T Consensus 30 d~~l~~dlG~DSl~~vel~~~le~~fgi~-----i~~~~~~~~~Tv~~l~~~i~~~ 80 (82)
T 2qnw_A 30 ESNFIKDLDADSLDSVELVMAFEEKFGVS-----IPDEEASKIATVQDALSYIEKA 80 (82)
T ss_dssp TCBHHHHSCCCHHHHHHHHHHHHHHHTCC-----CCHHHHTTCCBHHHHHHHHHHH
T ss_pred ccchhhccCCcHHHHHHHHHHHHHHHCCc-----CCHHHHHHcCCHHHHHHHHHHh
Confidence 5677 799 99999999999999999999 9999999999999999888765
|
| >2kwl_A ACP, acyl carrier protein; structural genomics, seattle structura genomics center for infectious disease, ssgcid, lipid bindi protein; NMR {Borrelia burgdorferi} | Back alignment and structure |
|---|
Probab=96.15 E-value=0.002 Score=51.63 Aligned_cols=50 Identities=10% Similarity=-0.051 Sum_probs=45.6
Q ss_pred Cchhh-hHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 77 SSHSI-QSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 77 ~~~~~-~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
.+..| .+| +|||..+||.++|...+|++ +|...++.++|...++.++..+
T Consensus 31 ~~~~l~~dlG~DSl~~vel~~~le~~fgi~-----i~~~~~~~~~Tv~~l~~~i~~~ 82 (84)
T 2kwl_A 31 TDSRFVEDLNADSLDIYELLYLLEEAFDDK-----IPENEANEFETVGDVVNFIKKR 82 (84)
T ss_dssp TTTHHHHTSSSCHHHHHHHHHHHHHHHTCC-----TTTTGGGGCSSHHHHHHHHHHH
T ss_pred CCCchhhhcCCCHHHHHHHHHHHHHHHCCC-----cCHHHHHHCCCHHHHHHHHHHH
Confidence 35678 899 99999999999999999999 9999999999999999888765
|
| >1f80_D Acyl carrier protein; transferase; HET: PN2; 2.30A {Bacillus subtilis} SCOP: a.28.1.1 PDB: 2x2b_A* 1hy8_A | Back alignment and structure |
|---|
Probab=96.15 E-value=0.00052 Score=54.66 Aligned_cols=49 Identities=12% Similarity=-0.108 Sum_probs=43.5
Q ss_pred Cchhh-hHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHH
Q 008146 77 SSHSI-QSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQR 130 (576)
Q Consensus 77 ~~~~~-~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~ 130 (576)
.+..| .+| +|||..+||.++|...+|++ +|...+|.++|+..++.++..
T Consensus 29 ~~~~l~~dlG~DSl~~vel~~~le~~fgi~-----i~~~~~~~~~Tv~~l~~~i~~ 79 (81)
T 1f80_D 29 LEASFKEDLGADXLDVVELVMELEDEFDME-----ISDEDAEKIATVGDAVNYIQN 79 (81)
T ss_dssp TTCBHHHHSCCCHHHHHHHHHHHHHHTTCC-----CCHHHHHHCCBHHHHHHHCC-
T ss_pred CccchHHHcCCcHHHHHHHHHHHHHHhCCc-----cCHHHHHHCCCHHHHHHHHHh
Confidence 35678 899 99999999999999999999 999999999999988877543
|
| >3gzm_A Acyl carrier protein; helix bundle, phosphopantetheine, fatty acid biosynthesis, L synthesis, transit peptide, biosynthetic protein; HET: PNS; 1.80A {Plasmodium falciparum} SCOP: a.28.1.0 PDB: 3gzl_A* 2fq0_A* 2fq2_A* | Back alignment and structure |
|---|
Probab=96.14 E-value=0.0012 Score=52.54 Aligned_cols=50 Identities=8% Similarity=-0.033 Sum_probs=45.8
Q ss_pred Cchhh-hHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 77 SSHSI-QSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 77 ~~~~~-~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
.+..| .+| +|||..+||..+|...+|++ +|...+++++|+..++.++..+
T Consensus 27 ~d~~l~~dlg~DSl~~vel~~~le~~fgi~-----i~~~~~~~~~Tv~~l~~~i~~~ 78 (81)
T 3gzm_A 27 MNSNFTKDLGADSLDLVELIMALEEKFNVT-----ISDQDALKINTVQDAIDYIEKN 78 (81)
T ss_dssp TTCBHHHHSCCCHHHHHHHHHHHHHHHTCC-----CCHHHHHTCCBHHHHHHHHHHH
T ss_pred CCCcchhhcCCCHHHHHHHHHHHHHHHCCC-----cCHHHHHHcCCHHHHHHHHHHH
Confidence 35678 699 99999999999999999999 9999999999999999988776
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=95.87 E-value=0.0013 Score=66.93 Aligned_cols=50 Identities=6% Similarity=-0.033 Sum_probs=46.6
Q ss_pred CchhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 77 SSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 77 ~~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
....|-+| .|||++++|.++|++.+|++ +|.+.+|++||+.++++++..+
T Consensus 31 ~~~~ff~lGgdSl~a~~l~~~l~~~~~~~-----~~~~~~~~~~t~~~la~~~~~~ 81 (329)
T 3tej_A 31 ADADFFALGGHXLLAMKLAAQLSRQVARQ-----VTPGQVMVASTVAKLATIIDAE 81 (329)
T ss_dssp TTCBTTTTTCCHHHHHHHHHHHHHHHTSC-----CCHHHHHHCCBHHHHHHHHHSC
T ss_pred CCCCHHHcCCcHHHHHHHHHHHHHHHCCC-----CCHHHHHhCCCHHHHHHHHHhh
Confidence 46789999 99999999999999999999 9999999999999999998765
|
| >1vku_A Acyl carrier protein; TM0175, structural genomics, JCSG, Pro structure initiative, PSI; 2.00A {Thermotoga maritima} SCOP: a.28.1.1 | Back alignment and structure |
|---|
Probab=95.85 E-value=0.0018 Score=54.08 Aligned_cols=49 Identities=4% Similarity=-0.053 Sum_probs=45.9
Q ss_pred chhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 78 SHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 78 ~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
+..|.+| +|||.+|||+++|...+|++ +|...++.++|+..++.++...
T Consensus 40 d~~L~dLGlDSL~~veL~~~LE~~fgi~-----i~~~~l~~~~TV~~L~~~I~~~ 89 (100)
T 1vku_A 40 ENTFKELGFDSIDVIDLVMFFEDEFALR-----IEDEEISKIRKVKDLIDIVIKK 89 (100)
T ss_dssp TSBTTTTTCCHHHHHHHHHHHHHHHTCC-----CCHHHHTTCCBHHHHHHHHHHH
T ss_pred CCCHHHcCCchHHHHHHHHHHHHHHCCC-----CCHHHHHcCCCHHHHHHHHHHH
Confidence 5678899 99999999999999999999 9999999999999999998877
|
| >2lte_A Specialized acyl carrier protein; APO protein, transferase; NMR {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=94.83 E-value=0.0014 Score=55.00 Aligned_cols=50 Identities=6% Similarity=-0.057 Sum_probs=45.7
Q ss_pred CchhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 77 SSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 77 ~~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
.+..|.+| +|||.+|||+++|...+|++ +|...+++++|+..++.++..+
T Consensus 48 ~d~~l~dLGlDSL~~veL~~~lE~~fgi~-----i~~~~l~~~~TV~~l~~~I~~~ 98 (103)
T 2lte_A 48 RDSRMEDLAFDSLVVSELSLKLRKEFGVT-----GVDDELDLLETVDELFQLVEKH 98 (103)
Confidence 35788999 99999999999999999999 9999999999999998888766
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.45 E-value=0.0021 Score=64.75 Aligned_cols=34 Identities=6% Similarity=-0.022 Sum_probs=9.4
Q ss_pred hcccccccchhhhhhhcCccccCCCCcccccCCCChhHH
Q 008146 86 ASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTAT 124 (576)
Q Consensus 86 dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al 124 (576)
|||+|++|++||++.+|++ ||.+.+|+|||+..+
T Consensus 3 dSL~a~~l~~rl~~~~g~~-----l~~~~lf~~pt~~~l 36 (316)
T 2px6_A 3 HNLACPTPKEDGLAQQQTQ-----LNLRSLLVNPEGPTL 36 (316)
T ss_dssp ----------------------------CCCCCTTSCSE
T ss_pred chHHHHHHHHHHHHHHhhc-----cchhhhhcCCCcCee
Confidence 8999999999999999999 999999999998743
|
| >2l4b_A Acyl carrier protein; infectious disease, human granulocytic anaplasmosis, ssgcid, structural genomics; NMR {Anaplasma phagocytophilum} | Back alignment and structure |
|---|
Probab=95.31 E-value=0.0038 Score=50.52 Aligned_cols=49 Identities=4% Similarity=-0.143 Sum_probs=45.0
Q ss_pred chhh-hHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 78 SHSI-QSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 78 ~~~~-~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
+..| .+| +|||..+||.++|...+|++ +|...++.++|+..++.++..+
T Consensus 34 d~~l~~dlglDSl~~vel~~~lE~~fgi~-----i~~~~~~~~~Tv~~l~~~i~~~ 84 (88)
T 2l4b_A 34 TTNLAKDFNLDSLDFVDLIMSLEERFSLE-----ISDEDAQKLETVDDICRYIASK 84 (88)
T ss_dssp TSCTTTTTTCCHHHHHHHHHHHHHHTTCC-----CCHHHHHTCCSHHHHHHHHHHH
T ss_pred CCchhhccCCcHHHHHHHHHHHHHHHCCC-----cCHHHHHHcCCHHHHHHHHHHh
Confidence 4567 789 99999999999999999999 9999999999999999998876
|
| >3ejb_A Acyl carrier protein; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ejd_A* 3eje_A* | Back alignment and structure |
|---|
Probab=94.89 E-value=0.0047 Score=51.19 Aligned_cols=49 Identities=10% Similarity=-0.079 Sum_probs=44.6
Q ss_pred chhh-hHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 78 SHSI-QSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 78 ~~~~-~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
+..| .+| +|||..+||..+|...+|++ +|...+++++|+..++.++...
T Consensus 45 d~~l~~dLGlDSL~~vel~~~lE~~fgi~-----i~~~~l~~~~Tv~~l~~~i~~~ 95 (97)
T 3ejb_A 45 NASFVEDLGADSLDTVELVMALEEEFDTE-----IPDEEAEKITTVQAAIDYINGH 95 (97)
T ss_dssp TCBTTTTTCCCTTHHHHHHHHHHHHTTCC-----CCHHHHHHCCBHHHHHHHHHHC
T ss_pred CCCchhhcCCCHHHHHHHHHHHHHHHCCC-----CCHHHHHhCCCHHHHHHHHHHh
Confidence 5667 699 99999999999999999999 9999999999999999888664
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=94.84 E-value=0.0049 Score=66.67 Aligned_cols=50 Identities=8% Similarity=0.036 Sum_probs=0.0
Q ss_pred CCchhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 76 GSSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 76 ~~~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
+....|-+| -|||++++|.++|++ +|++ +|...+|+|||+.+|++++...
T Consensus 64 ~~~~~ff~lGg~Sl~a~~l~~~~~~-~~~~-----~~~~~~~~~~t~~~la~~~~~~ 114 (508)
T 4f6l_B 64 GVDDDFFELGGNSLEAMLVVSHLKR-FGHH-----ISMQTLYQYKTVRQIVNYMYQN 114 (508)
T ss_dssp ---------------------------------------------------------
T ss_pred CCCCChHHcCchHHHHHHHHHHHHH-cCCC-----ccHHHHhcCCcHHHHHHHHHhh
Confidence 356789999 999999999999986 8888 9999999999999999998776
|
| >2kw2_A Specialized acyl carrier protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Rhodopseudomonas palustris} PDB: 2ll8_A* 2lpk_A 3lmo_A | Back alignment and structure |
|---|
Probab=94.54 E-value=0.0031 Score=52.65 Aligned_cols=48 Identities=6% Similarity=-0.202 Sum_probs=41.8
Q ss_pred hhh-hHh-hhcccccccchhhhhhhcCccccCCCCccc------c-----cCCCChhHHHHHHHHH
Q 008146 79 HSI-QSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSS------F-----FGSNNSTATLNRRQRR 131 (576)
Q Consensus 79 ~~~-~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~------~-----Fd~pt~~al~~~~~~~ 131 (576)
..| .+| +|||..|||..+|...+|++ +|... + |+|||+..++.++...
T Consensus 27 ~~l~~dLGlDSL~~veLi~~lE~~fgi~-----i~~~~l~~~~~~~~~~T~~~~Tv~~l~~~i~~~ 87 (101)
T 2kw2_A 27 SHAIDDLGIDSLDFLDIAFAIDKAFGIK-----LPLEKWTQEVNDGKATTEQYFVLKNLAARIDEL 87 (101)
T ss_dssp CBCCCCCCCCHHHHHHHHHHHHHHTTCC-----CCHHHHHHHHHTTSSCHHHHHBHHHHHHHHHHH
T ss_pred cchHHhcCCCHHHHHHHHHHHHHHHCCc-----cCHHHhcchhhhhhccCCCcCcHHHHHHHHHHH
Confidence 445 799 99999999999999999999 99876 3 7777799999988876
|
| >4dxe_H ACP, acyl carrier protein; acyl-carrier-protein synthase, type II acid synthesis pathway; 2.51A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=94.12 E-value=0.0081 Score=50.15 Aligned_cols=49 Identities=12% Similarity=-0.138 Sum_probs=43.3
Q ss_pred chhh-hHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 78 SHSI-QSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 78 ~~~~-~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
+..| .+| +|||..+||..+|...+|++ +|...+++.+|+..++.++..+
T Consensus 49 d~~l~~dLGlDSL~~veLi~~lE~~fgi~-----i~~~~l~~~~Tv~dl~~~I~~~ 99 (101)
T 4dxe_H 49 DASFKDDLGADSLDIAELVMELEDEFGTE-----IPDEEAEKINTVGDAVKFINSL 99 (101)
T ss_dssp TCBTTTTSCCCHHHHHHHHHHHHHHTTCC-----CCHHHHTTCCBHHHHHHHHC--
T ss_pred CCcchhhcCCCcHHHHHHHHHHHHHHCCC-----CCHHHHHcCCCHHHHHHHHHHc
Confidence 5667 899 99999999999999999999 9999999999999988877544
|
| >4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A* | Back alignment and structure |
|---|
Probab=93.88 E-value=0.01 Score=65.84 Aligned_cols=51 Identities=8% Similarity=-0.014 Sum_probs=0.0
Q ss_pred CCchhhhHh-hhcccccccchhhhh-hhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 76 GSSHSIQSL-MASCLPFEPCNEYYS-SVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 76 ~~~~~~~~~-~dsl~avel~n~l~~-~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
+.+..|=+| -|||+|++|.++|++ .+|++ +|...+|+|||+.+|++++...
T Consensus 543 ~~~d~Ff~lGGdSl~a~~l~~~l~~~~~~~~-----l~~~~~f~~pti~~la~~l~~~ 595 (620)
T 4dg8_A 543 AADQDFFLCGGNSLLALQLVALCQSAGAGAN-----LGLADLQANSRLDQFSRLLRSH 595 (620)
T ss_dssp ----------------------------------------------------------
T ss_pred CCCCChhhccCcHHHHHHHHHHHHhhCCCCC-----cCHHHHhcCCCHHHHHHHHHhc
Confidence 456789999 999999999999998 78988 9999999999999999988765
|
| >1fh1_A NODF, nodulation protein F; ROOT nodulation factor, protein backbone fold, lipid binding protein; NMR {Rhizobium leguminosarum} SCOP: i.11.1.1 | Back alignment and structure |
|---|
Probab=93.82 E-value=0.012 Score=48.00 Aligned_cols=49 Identities=10% Similarity=-0.064 Sum_probs=22.6
Q ss_pred chhhhHh-hhcccccccchhhhhhhcCccccCCCC---cccccCCCChhHHHHHHHHH
Q 008146 78 SHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNG---FSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 78 ~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~---~t~~Fd~pt~~al~~~~~~~ 131 (576)
...|.+| +|||..+||..+|...+|++ +| ...++.++|+..++.++..+
T Consensus 35 d~~l~dlg~DSl~~vel~~~lE~~fgi~-----i~~~~~~~~~~~~Tv~~l~~~i~~~ 87 (92)
T 1fh1_A 35 DTELTSLGIDSLGLADVLWDLEQLYGIK-----IEMNTADAWSNLNNIGDVVEAVRGL 87 (92)
T ss_dssp -----------CTTTTHHHHHHHC----------------------CTTTSTHHHHC-
T ss_pred CCCHhhcCCChHHHHHHHHHHHHHhCCc-----cCCccHhHHhhcCCHHHHHHHHHHH
Confidence 5678899 99999999999999999999 98 67889999999998888765
|
| >2jq4_A AGR_C_4658P, hypothetical protein ATU2571; ATC2521, unknown function, ATC, S genomics, PSI-2, protein structure initiative; NMR {Agrobacterium tumefaciens} SCOP: a.28.1.1 | Back alignment and structure |
|---|
Probab=93.27 E-value=0.027 Score=47.27 Aligned_cols=50 Identities=4% Similarity=-0.160 Sum_probs=44.6
Q ss_pred CchhhhHh-hhcccccccchhhhhhhcCccccCCCCccccc--CCCChhHHHHHHHHH
Q 008146 77 SSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFF--GSNNSTATLNRRQRR 131 (576)
Q Consensus 77 ~~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~F--d~pt~~al~~~~~~~ 131 (576)
.+..|.+| +|||..|||..+|...+|++ +|...++ +++|+..++......
T Consensus 46 ~d~~l~dlGlDSL~~veLv~~lE~~fgI~-----i~~~~l~~~~~~tv~~l~~~v~~~ 98 (105)
T 2jq4_A 46 DEADLYAAGLSSFASVQLMLGIEEAFDIE-----FPDNLLNRKSFASIKAIEDTVKLI 98 (105)
T ss_dssp TTSCGGGGTCCHHHHHHHHHHHHHHHSCC-----CCHHHHSSGGGGCHHHHHHHHHHH
T ss_pred CCCCHhhcCCCHHHHHHHHHHHHHHHCCC-----cCHHHhhhhhcCCHHHHHHHHHHH
Confidence 35677799 99999999999999999999 9999988 899999888887765
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=93.00 E-value=0.025 Score=68.30 Aligned_cols=51 Identities=6% Similarity=-0.027 Sum_probs=47.0
Q ss_pred CCchhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 76 GSSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 76 ~~~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
+....|-+| .|||++++|.+||++.+|++ +|...+|+|||+.+|+.++...
T Consensus 991 ~~~~~ff~lGg~Sl~a~~l~~~l~~~~g~~-----l~~~~~~~~~ti~~la~~~~~~ 1042 (1304)
T 2vsq_A 991 GIHDDFFALGGHALKAMTAASRIKKELGID-----LPVKLLFEAPTIAGISAYLKNG 1042 (1304)
T ss_dssp CTTCCTTTTTCCHHHHHHHHHHSSSTTSCC-----CCSSCTTTCCSHHHHHHHHHHT
T ss_pred CCCCCHHHhCCChHHHHHHHHHHHHHhCCC-----CCHHHHHhCCCHHHHHHHHHhc
Confidence 456789999 99999999999999999999 9999999999999999998765
|
| >3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=92.47 E-value=0.019 Score=63.65 Aligned_cols=50 Identities=10% Similarity=-0.000 Sum_probs=43.7
Q ss_pred CCchhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 76 GSSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 76 ~~~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
+.+..|-+| .|||+|++|.++|++ .|.. ++...+|+|||+.+|++++..+
T Consensus 565 ~~~d~Ff~lGgdSl~a~~l~~~l~~-~~~~-----~~~~~~~~~pti~~la~~l~~~ 615 (617)
T 3rg2_A 565 FDDDNLIDYGLDSVRMMALAARWRK-VHGD-----IDFVMLAKNPTIDAWWKLLSRE 615 (617)
T ss_dssp CTTSCGGGGTCCHHHHHHHHHHHHT-TSTT-----CCHHHHHHSCCHHHHHHHHCC-
T ss_pred CCCCChhhcCccHHHHHHHHHHHHH-hcCC-----CCHHHHhcCCCHHHHHHHHHhh
Confidence 446789999 999999999999987 5767 9999999999999999988654
|
| >2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis} | Back alignment and structure |
|---|
Probab=91.35 E-value=0.036 Score=59.66 Aligned_cols=51 Identities=8% Similarity=-0.048 Sum_probs=46.4
Q ss_pred CCchhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 76 GSSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 76 ~~~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
+....|-+| -|||+|++|.+++++.+|+. ++...+|++||+..++.++...
T Consensus 29 ~~~d~ff~lGgdSl~a~~l~~~~~~~~g~~-----l~~~~i~~~~ti~~la~~~~~~ 80 (520)
T 2jgp_A 29 GALDDFFALGGHSLRAMRVLSSMHNEYQVD-----IPLRILFEKPTIQELAAFIEET 80 (520)
T ss_dssp CTTCBTTTTTCCHHHHHHHHHHHHHHHCBC-----CCHHHHHHSCBHHHHHHHHHHC
T ss_pred CCCccHHHhcccHHHHHHHHHHHHHHhCCC-----cCHHHHhcCCCHHHHHHHHHhh
Confidence 346778899 99999999999999999999 9999999999999999888764
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=90.48 E-value=0.05 Score=69.61 Aligned_cols=49 Identities=6% Similarity=-0.038 Sum_probs=0.0
Q ss_pred CchhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 77 SSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 77 ~~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
....|.+| +|||+||||||+|.+.+|+. ||...+|+ +|..+|++.....
T Consensus 2146 ~~~~~~~lG~DSL~avelr~~i~~~~~~~-----l~~~~i~~-~t~~~la~~~~~~ 2195 (2512)
T 2vz8_A 2146 PDSTLVDLGLDSLMGVEVRQILEREHDLV-----LSMREVRQ-LSLRKLQELSSKT 2195 (2512)
T ss_dssp --------------------------------------------------------
T ss_pred CCCchHHhCcchHHHHHHHHHHHHHhCCc-----ccHHHHHh-hhHHHHHHHHhhc
Confidence 36789999 99999999999999999998 99999999 8888887765543
|
| >2fq1_A Isochorismatase; ENTB, NRPS, multi-domain, ACP, hydrolase; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=89.62 E-value=0.083 Score=52.59 Aligned_cols=46 Identities=7% Similarity=-0.035 Sum_probs=42.7
Q ss_pred chhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHH
Q 008146 78 SHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQ 129 (576)
Q Consensus 78 ~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~ 129 (576)
...|-+| +||+.+++|.+++++. |++ ++++.+|++||..++++++.
T Consensus 237 ~~nL~~lGlDSi~~m~l~~~~~~~-g~~-----~~~~~l~~~ptl~~~~~~l~ 283 (287)
T 2fq1_A 237 DDNLIDYGLDSVRMMALAARWRKV-HGD-----IDFVMLAKNPTIDAWWKLLS 283 (287)
T ss_dssp TSCSGGGTCCTTHHHHHHHHHTTT-CTT-----CCHHHHHTSCSHHHHHHHHH
T ss_pred CCCHHHhCccHHHHHHHHHHHHHc-CCC-----CCHHHHHhCccHHHHHHHHH
Confidence 4678889 9999999999999998 999 99999999999999988886
|
| >3ce7_A Specific mitochodrial acyl carrier protein; malaria, mitochondrial, ACP, fatty acid biosynthesis, lipid synthesis, phosphopantetheine; 1.64A {Toxoplasma} | Back alignment and structure |
|---|
Probab=88.85 E-value=0.091 Score=44.14 Aligned_cols=45 Identities=2% Similarity=-0.288 Sum_probs=42.7
Q ss_pred hHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 82 QSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 82 ~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
.+| +|||..+||..+|...+|++ +|...+...+|+..+..++..+
T Consensus 51 ~dLglDSL~~veli~~lE~~fgi~-----i~~~~~~~~~Tv~~l~~~i~~~ 96 (107)
T 3ce7_A 51 EDRLWDCLDTVEFVLDVEEIFDVT-----VPDEVADNFQTLQEIADFVVSE 96 (107)
T ss_dssp TSSBCCHHHHHHHHHHHHHHHTCC-----CCHHHHTTCCSHHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHHHHHHHCCC-----CCHHHHHhcCCHHHHHHHHHHH
Confidence 689 99999999999999999999 9999999999999999998887
|
| >2cgq_A Acyl carrier protein ACPA; RV0033, protein transport, phosphopant; 1.83A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=86.79 E-value=0.1 Score=44.27 Aligned_cols=49 Identities=10% Similarity=0.029 Sum_probs=45.0
Q ss_pred chhh-hHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 78 SHSI-QSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 78 ~~~~-~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
+..| .+| +|||..|||...|...+|++ +|...+...+|+..+...+...
T Consensus 48 d~~l~~dLGlDSLd~veLi~~LEe~FgI~-----I~~e~l~~~~TV~dlv~~I~~~ 98 (113)
T 2cgq_A 48 NQVLVDDLGFDSLKLFQLITELEDEFDIA-----ISFRDAQNIKTVGDVYTSVAVW 98 (113)
T ss_dssp TCBTTTTTCCCHHHHHHHHHHHHHHHTCC-----CCHHHHHHCCBHHHHHHHHHTT
T ss_pred CCchhhhcCCCHHHHHHHHHHHHHHhCCC-----cCHHHHHhCCCHHHHHHHHHHH
Confidence 4567 789 99999999999999999999 9999999999999999988876
|
| >1dv5_A APO-DCP, APO-D-alanyl carrier protein; 3-helix bundle, transport protein; NMR {Lactobacillus casei} SCOP: a.28.1.3 PDB: 1hqb_A | Back alignment and structure |
|---|
Probab=82.26 E-value=0.36 Score=37.91 Aligned_cols=47 Identities=11% Similarity=0.005 Sum_probs=40.1
Q ss_pred hhhhHh--hhcccccccchhhhhhhcCccccCCCCccccc--CCCChhHHHHHHHH
Q 008146 79 HSIQSL--MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFF--GSNNSTATLNRRQR 130 (576)
Q Consensus 79 ~~~~~~--~dsl~avel~n~l~~~~g~~~~~~~l~~t~~F--d~pt~~al~~~~~~ 130 (576)
..|.++ +|||..+||.-.|...+|++ +|...+. .++|+..+..+...
T Consensus 28 ~~l~~~g~lDSl~~velv~~lE~~fgi~-----i~~~~~~~~~~~Tv~~l~~~i~~ 78 (80)
T 1dv5_A 28 LNLFETGLLDSMGTVQLLLELQSQFGVD-----APVSEFDRKEWDTPNKIIAKVEQ 78 (80)
T ss_dssp CCSSTTSSCCSHHHHHHHHHHTTTSCCC-----CCCSSCCTTTTTSHHHHHHHHHT
T ss_pred cchhhccCcChHHHHHHHHHHHHHhCCc-----CCHHHcCHHhcCCHHHHHHHHHH
Confidence 444444 99999999999999999999 9988887 89999988887764
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 576 | ||||
| d1j3na1 | 249 | c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II { | 1e-70 | |
| d2gfva1 | 250 | c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II { | 1e-67 | |
| d1e5ma1 | 250 | c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II { | 2e-60 | |
| d1ox0a1 | 256 | c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II | 2e-57 | |
| d2ix4a1 | 270 | c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II | 1e-52 | |
| d2vbaa1 | 253 | c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {E | 2e-52 | |
| d1tqya2 | 205 | c.95.1.1 (A:219-423) Actinorhodin polyketide putat | 2e-46 | |
| d2ix4a2 | 161 | c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II | 3e-43 | |
| d1e5ma2 | 161 | c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II | 2e-38 | |
| d2gfva2 | 161 | c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II | 3e-37 | |
| d1tqyb2 | 194 | c.95.1.1 (B:210-403) Actinorhodin polyketide putat | 2e-36 | |
| d1tqya1 | 216 | c.95.1.1 (A:3-218) Actinorhodin polyketide putativ | 9e-36 | |
| d1j3na2 | 159 | c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II | 4e-35 | |
| d1ox0a2 | 158 | c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II | 2e-33 | |
| d2vbaa2 | 151 | c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I | 1e-31 | |
| d1tqyb1 | 208 | c.95.1.1 (B:2-209) Actinorhodin polyketide putativ | 4e-30 |
| >d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Length = 249 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Score = 225 bits (574), Expect = 1e-70
Identities = 107/252 (42%), Positives = 158/252 (62%), Gaps = 5/252 (1%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 224
+RVVVTG+G ++P+G + F+ L G SG+ I FD ++ P +IAAE+
Sbjct: 2 RRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITRFDASALPVRIAAEVDVDPGAYLD 61
Query: 225 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIE 284
+L +R+D+F+ Y L A + AL D G+ + +LD + G L+G+G+GGM+ +
Sbjct: 62 RKEL-RRLDRFVQYALIAAQLALEDAGLKPE---DLDPERVGTLVGTGIGGMETWEAQSR 117
Query: 285 AL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIR 343
+++PF +P NM SA +AM G+ GP+ ++ TACAT + +A I
Sbjct: 118 VFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTVVTACATGADALGSALRMIQL 177
Query: 344 GEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 403
GEA+++L GG++AA+ P+ +G F RALS RN +P KASRP+ ++RDGFVMGEGAGVL+
Sbjct: 178 GEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRDGFVMGEGAGVLV 237
Query: 404 LEELEHAKKRGA 415
LE EHAKKRGA
Sbjct: 238 LEAYEHAKKRGA 249
|
| >d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Score = 217 bits (554), Expect = 1e-67
Identities = 110/252 (43%), Positives = 164/252 (65%), Gaps = 4/252 (1%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 224
+RVVVTG+G++SP+G+ + + LL G SGIS I+ FD +++ TK A +K F+ + +
Sbjct: 2 RRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDII 61
Query: 225 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIE 284
+ K ++MD F+ Y + AG +A+ D G+ E + ++ G IGSG+GG+ + +
Sbjct: 62 SRKEQRKMDAFIQYGIVAGVQAMQDSGLEIT---EENATRIGAAIGSGIGGLGLIEENHT 118
Query: 285 ALRISY-KKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIR 343
+L +K++PF VP NM + L + G GP+ SI+TA + I +AA I
Sbjct: 119 SLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATAQTSGVHNIGHAARIIAY 178
Query: 344 GEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 403
G+A+VM+ GG++ A P+G+GGF A RALS RN++P ASRPWD RDGFV+G+GAG+L+
Sbjct: 179 GDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAGMLV 238
Query: 404 LEELEHAKKRGA 415
LEE EHAKKRGA
Sbjct: 239 LEEYEHAKKRGA 250
|
| >d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Score = 198 bits (504), Expect = 2e-60
Identities = 107/252 (42%), Positives = 156/252 (61%), Gaps = 4/252 (1%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 224
KRVVVTG+G ++P+G+ ++ L+EG +GI I FD + + E+K F ++
Sbjct: 2 KRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQFL 61
Query: 225 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIE 284
K +KRMD+F + + A ++A+ D + +NEL+ + GVLIG+G+GG+KV D
Sbjct: 62 DRKEAKRMDRFCHFAVCASQQAINDAKLV---INELNADEIGVLIGTGIGGLKVLEDQQT 118
Query: 285 ALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIR 343
L + +PF +P NM S + A++LG GPN TACA + I +A +
Sbjct: 119 ILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFRLVQN 178
Query: 344 GEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 403
G A M+CGG++AA+ P+ GF + RALS RN+DP ASRP+D +RDGFVMGEG+G+L+
Sbjct: 179 GYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRDGFVMGEGSGILI 238
Query: 404 LEELEHAKKRGA 415
LEELE A RGA
Sbjct: 239 LEELESALARGA 250
|
| >d1ox0a1 c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Score = 190 bits (484), Expect = 2e-57
Identities = 110/256 (42%), Positives = 156/256 (60%), Gaps = 5/256 (1%)
Query: 161 HMKQKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFST 220
HMK RVVVTG G+ SP+G+ P+ F+N+L G GI I FD + F AAEI+ F
Sbjct: 5 HMKLNRVVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGITKFDHSDFDVHNAAEIQDFPF 64
Query: 221 DGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFY 280
D + K + R D + LY L A ++A+ + + L++ + GV++ SG+GG+K
Sbjct: 65 DKYFVKKDTNRFDNYSLYALYAAQEAVNHANLD---VEALNRDRFGVIVASGIGGIKEIE 121
Query: 281 DAIEALRIS-YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAAN 339
D + L K++ P +P A NM S +AM G G SI+TAC++SN I +A
Sbjct: 122 DQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSINTACSSSNDAIGDAFR 181
Query: 340 HIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGA 399
I G +VML GG++A++ P + GF A ALS DPT+AS P+D +R+GFVMGEG+
Sbjct: 182 SIKFGFQDVMLVGGTEASITPFAIAGFQALTALS-TTEDPTRASIPFDKDRNGFVMGEGS 240
Query: 400 GVLLLEELEHAKKRGA 415
G+L+LE LEHA+KRGA
Sbjct: 241 GMLVLESLEHAEKRGA 256
|
| >d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Score = 178 bits (452), Expect = 1e-52
Identities = 94/271 (34%), Positives = 145/271 (53%), Gaps = 19/271 (7%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFD--------------CTSFPTK 210
+RVVVTG+G+V+PLG + + L++G GI + D +K
Sbjct: 1 RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSK 60
Query: 211 IAAEIKSFSTDGWVAPKL---SKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGV 267
+AA + S G L SK + F+ Y + A +AL D E +++ +
Sbjct: 61 VAAFVPYGSNPGEFDEALWLNSKAVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSI 120
Query: 268 LIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTAC 327
G G V + ++++PF +P NM S ++M G+ GPN++ TAC
Sbjct: 121 GGGIGSICDIVEAAQLI-CEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTAC 179
Query: 328 ATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNND-PTKASRPW 386
AT I +A I G+A+VM+ GG+++++ + + GF RALS + N P +ASRP+
Sbjct: 180 ATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPF 239
Query: 387 DINRDGFVMGEGAGVLLLEELEHAKKRGAKI 417
D +RDGFV+GEG+GV++LEE EHAK+RGAKI
Sbjct: 240 DCDRDGFVIGEGSGVIVLEEYEHAKRRGAKI 270
|
| >d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Score = 177 bits (449), Expect = 2e-52
Identities = 78/255 (30%), Positives = 121/255 (47%), Gaps = 5/255 (1%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 224
KR V+TG+G+VS +G+ +L EG SGI+ + + + + +K +T
Sbjct: 2 KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVKLDTTGLID 61
Query: 225 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIE 284
+ D + L+ A + + G++ GSG G + +
Sbjct: 62 RKVVRFMSDASIYAFLSM---EQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGAD 118
Query: 285 ALRIS--YKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHII 342
A+R K + P+ V A + SA LA G NYSIS+ACATS CI NA I
Sbjct: 119 AMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQ 178
Query: 343 RGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 402
G+ +++ GG + + ++ N+ P KASR +D +RDGFV+ G G++
Sbjct: 179 LGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMV 238
Query: 403 LLEELEHAKKRGAKI 417
++EELEHA RGA I
Sbjct: 239 VVEELEHALARGAHI 253
|
| >d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Score = 159 bits (404), Expect = 2e-46
Identities = 77/200 (38%), Positives = 111/200 (55%), Gaps = 2/200 (1%)
Query: 377 NDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEP 436
+DP ASRP+D RDGFV+ EGA + +LE+ + A RGA+I+AE G + +AYHMT
Sbjct: 1 DDPEHASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGL 60
Query: 437 HPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVN 495
DG + I AL S D++YINAH + T D E A G++ R V+
Sbjct: 61 KADGREMAETIRVALDESRTDATDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVS 120
Query: 496 STKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKA 555
S KSM+GH LGA G++E A V A+ G + P NL D D + + +ER ++++
Sbjct: 121 SIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECDLDYVPLEARER-KLRS 179
Query: 556 ALSNSFGFGGHNSSIIFSPY 575
L+ GFGG S+++
Sbjct: 180 VLTVGSGFGGFQSAMVLRDA 199
|
| >d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Score = 149 bits (378), Expect = 3e-43
Identities = 68/159 (42%), Positives = 99/159 (62%), Gaps = 3/159 (1%)
Query: 418 YAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIK 477
YAE G + DA+H+T+P DG G +L + +AL SG+ ++Y+NAHATSTP GD
Sbjct: 1 YAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAV 60
Query: 478 EYQALIHCFGQNRGLR---VNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENP 534
E +A+ F ++ +STK GHLLGAAGAVEAI + AI G +N++NP
Sbjct: 61 EARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNP 120
Query: 535 DAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573
D + D + +++ V+ A+SNSFGFGG N+S++F+
Sbjct: 121 DPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFA 159
|
| >d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Score = 136 bits (343), Expect = 2e-38
Identities = 80/162 (49%), Positives = 100/162 (61%), Gaps = 2/162 (1%)
Query: 416 KIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGD 475
KIY E G + T DAYH+T P PDG G I AL SG+ E V+YINAH TSTPA D
Sbjct: 1 KIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPAND 60
Query: 476 IKEYQALIHCFGQNR-GLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENP 534
+ E +A+ G + + V+STKSM GHLLG +G +EA+A V AI + P INLENP
Sbjct: 61 VTETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENP 120
Query: 535 DAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 576
D D + + G + V ALSNSFGFGGHN ++ F Y+
Sbjct: 121 DPECDLDYVPGQSRAL-IVDVALSNSFGFGGHNVTLAFKKYQ 161
|
| >d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Score = 133 bits (335), Expect = 3e-37
Identities = 76/159 (47%), Positives = 99/159 (62%), Gaps = 1/159 (0%)
Query: 416 KIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGD 475
KIYAE G +SDAYHMT P +G G L + AL +G+ + Y+NAH TSTPAGD
Sbjct: 1 KIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGD 60
Query: 476 IKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENP 534
E QA+ FG+ + V+STKSM GHLLGAAGAVE+I + A+R + P INL+NP
Sbjct: 61 KAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNP 120
Query: 535 DAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573
D D + + ++ ++ L NSFGFGG N S+IF
Sbjct: 121 DEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFK 159
|
| >d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 194 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Score = 132 bits (333), Expect = 2e-36
Identities = 47/198 (23%), Positives = 83/198 (41%), Gaps = 4/198 (2%)
Query: 378 DPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPH 437
DP +A P+D G+V GEG +L+LE+ A+ RG + + + +
Sbjct: 1 DPDRAYLPFDERAAGYVPGEGGAILVLEDSAAAEARGRHDA--YGELAGCASTFDPAPGS 58
Query: 438 PDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNST 497
G+ I AL +G EDV+ + A P D E +A I G+ V
Sbjct: 59 GRPAGLERAIRLALNDAGTGPEDVDVVFADGAGVPELDAAEARA-IGRVFGREGVPVTVP 117
Query: 498 KSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAAL 557
K+ G L G ++ + + ++R G I P + + ++++G + + AL
Sbjct: 118 KTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYGIDLVLGEPRST-APRTAL 176
Query: 558 SNSFGFGGHNSSIIFSPY 575
+ G G NS+ + +
Sbjct: 177 VLARGRWGFNSAAVLRRF 194
|
| >d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Length = 216 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Score = 131 bits (329), Expect = 9e-36
Identities = 51/216 (23%), Positives = 93/216 (43%), Gaps = 4/216 (1%)
Query: 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWV 224
+RVV+TG+G+ +P G+ F+ L G + I FD + + +++AAE
Sbjct: 1 RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEADFDPVAEGF 60
Query: 225 APKLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIE 284
P+ RMD+ + + ++A A G+ D ++ + ++ Y +
Sbjct: 61 GPRELDRMDRASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLS 120
Query: 285 ----ALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANH 340
+ ++ + ++ A +A +G GP +ST C + + NA
Sbjct: 121 DSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAEGPVTMVSTGCTSGLDSVGNAVRA 180
Query: 341 IIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRN 376
I G A+VM G +D + PI + F A RA + RN
Sbjct: 181 IEEGSADVMFAGAADTPITPIVVACFDAIRATTARN 216
|
| >d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Length = 159 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Score = 127 bits (320), Expect = 4e-35
Identities = 85/159 (53%), Positives = 109/159 (68%), Gaps = 3/159 (1%)
Query: 416 KIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGD 475
+IYAE G ++DA+H+TEPHP+G G L + +AL +G++ E V YINAH TSTP GD
Sbjct: 1 RIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGD 60
Query: 476 IKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENP 534
E A+ FG + + L V+STKSMIGHLLGAAGAVEAIA VQA+ G I P INLE+P
Sbjct: 61 RAEVLAIKRVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDP 120
Query: 535 DAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573
D +D + + P+ +V ALSNSF FGGHN+ + F
Sbjct: 121 DPELDLDFV--PEPREAKVDYALSNSFAFGGHNAVLAFK 157
|
| >d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Length = 158 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Score = 122 bits (307), Expect = 2e-33
Identities = 71/160 (44%), Positives = 98/160 (61%), Gaps = 3/160 (1%)
Query: 417 IYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDI 476
I AE G T DAYHMT PHP+G G I I+ AL + +S E V Y+NAH TSTPA +
Sbjct: 2 ILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEK 61
Query: 477 KEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDA 536
E A++ G+ + V+STKS GHLLGAAGAVEAI ++A+R ++
Sbjct: 62 GESGAIVAVLGKE--VPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSD 119
Query: 537 VVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPYK 576
++ NV+ G E+ E+ A+SN+FGFGGHN+ + F ++
Sbjct: 120 YIEANVVYGQGLEK-EIPYAISNTFGFGGHNAVLAFKRWE 158
|
| >d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Length = 151 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Score = 117 bits (294), Expect = 1e-31
Identities = 58/156 (37%), Positives = 86/156 (55%), Gaps = 7/156 (4%)
Query: 418 YAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIK 477
YAE G TSD M P +G + C++ A+ ++Y+N+H TSTP GD+K
Sbjct: 1 YAEIVGYGATSDGADMVAPSGEGA--VRCMKMAMHGV---DTPIDYLNSHGTSTPVGDVK 55
Query: 478 EYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAV 537
E A+ FG +++TK+M GH LGAAG EAI + + G+I P+IN+E D
Sbjct: 56 ELAAIREVFGDKS-PAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQ 114
Query: 538 VDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573
+V +R E+ +SNSFGFGG N++++
Sbjct: 115 AAGLNIVTETTDR-ELTTVMSNSFGFGGTNATLVMR 149
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 208 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Score = 115 bits (288), Expect = 4e-30
Identities = 43/207 (20%), Positives = 88/207 (42%), Gaps = 3/207 (1%)
Query: 167 VVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAP 226
V++TG+G+V+P G +++ +L+G G+ + FD + +P +A +I F +
Sbjct: 2 VLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDDFHAPDHIPG 61
Query: 227 KLSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL 286
+L + D LTA AL D + + + D + G + +
Sbjct: 62 RLLPQTDPSTRLALTAADWALQDAKADPESLTDYDMGVVT--ANACGGFDFTHREFRKLW 119
Query: 287 RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEA 346
K ++ + + + +++ G GP+ ++ A + +A I RG
Sbjct: 120 SEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSSALVAEQAGGLDALGHARRTIRRG-T 178
Query: 347 NVMLCGGSDAAVIPIGLGGFVACRALS 373
+++ GG D+A+ P G +A +S
Sbjct: 179 PLVVSGGVDSALDPWGWVSQIASGRIS 205
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 576 | |||
| d2gfva1 | 250 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 100.0 | |
| d1ox0a1 | 256 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 100.0 | |
| d1j3na1 | 249 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 100.0 | |
| d1tqya2 | 205 | Actinorhodin polyketide putative beta-ketoacyl syn | 100.0 | |
| d1e5ma1 | 250 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 100.0 | |
| d1tqyb2 | 194 | Actinorhodin polyketide putative beta-ketoacyl syn | 100.0 | |
| d2vbaa1 | 253 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 100.0 | |
| d2ix4a1 | 270 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 100.0 | |
| d1e5ma2 | 161 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 100.0 | |
| d1ox0a2 | 158 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 100.0 | |
| d2gfva2 | 161 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 100.0 | |
| d2ix4a2 | 161 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 100.0 | |
| d1j3na2 | 159 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 100.0 | |
| d1tqyb1 | 208 | Actinorhodin polyketide putative beta-ketoacyl syn | 100.0 | |
| d1tqya1 | 216 | Actinorhodin polyketide putative beta-ketoacyl syn | 100.0 | |
| d2vbaa2 | 151 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 100.0 | |
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 99.56 | |
| d1wdkc1 | 262 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 99.23 | |
| d1m3ka1 | 268 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 99.18 | |
| d1u6ea1 | 184 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 99.16 | |
| d1hnja1 | 174 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 99.16 | |
| d1ulqa1 | 273 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 99.15 | |
| d1ub7a1 | 172 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 99.14 | |
| d1mzja1 | 181 | Priming beta-ketosynthase from the r1128 polyketid | 99.12 | |
| d1afwa2 | 124 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 99.01 | |
| d1m3ka2 | 124 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 98.93 | |
| d1afwa1 | 269 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 98.93 | |
| d1ulqa2 | 125 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 98.91 | |
| d1wdkc2 | 128 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 98.87 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 98.86 | |
| d1bi5a1 | 235 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 98.68 | |
| d1xpma1 | 166 | 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap | 98.6 | |
| d1or5a_ | 82 | Frenolicin polyketide synthase acyl carrier protei | 98.26 | |
| d2af8a_ | 86 | Actinorhodin polyketide synthase acyl carrier prot | 98.23 | |
| d1nq4a_ | 95 | Oxytetracycline polyketide synthase acyl carrier { | 98.22 | |
| d2gdwa1 | 76 | Peptidyl carrier protein (PCP), thioester domain { | 97.61 | |
| d1klpa_ | 115 | Acyl carrier protein {Mycobacterium tuberculosis [ | 97.57 | |
| d2pnga1 | 76 | Type I fatty acid synthase ACP domain {Rat (Rattus | 97.37 | |
| d1vkua_ | 85 | Acyl carrier protein {Thermotoga maritima [TaxId: | 97.23 | |
| d1f80d_ | 74 | Acyl carrier protein {Bacillus subtilis [TaxId: 14 | 96.97 | |
| d1u6ea2 | 148 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 96.91 | |
| d2jq4a1 | 83 | Hypothetical protein Atu2571 {Agrobacterium tumefa | 96.81 | |
| d1dv5a_ | 80 | apo-D-alanyl carrier protein {Lactobacillus casei | 96.71 | |
| d1hnja2 | 143 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 95.78 | |
| d1mzja2 | 153 | Priming beta-ketosynthase from the r1128 polyketid | 95.47 | |
| d1ub7a2 | 149 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 95.24 | |
| d1t8ka_ | 77 | Acyl carrier protein {Escherichia coli [TaxId: 562 | 94.77 | |
| d1u0ma2 | 148 | Putative polyketide synthase SCO1206 {Streptomyces | 93.66 | |
| d1bi5a2 | 154 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 87.15 | |
| d1ee0a2 | 160 | Pyrone synthase (PyS, chalcone synthase 2) {Gerber | 86.93 | |
| d1u0ua2 | 156 | Dihydropinosylvin synthase {Scots pine (Pinus sylv | 83.68 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 81.45 |
| >d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.2e-47 Score=380.88 Aligned_cols=249 Identities=44% Similarity=0.758 Sum_probs=233.7
Q ss_pred CCcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 008146 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 243 (576)
Q Consensus 164 ~~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa 243 (576)
+++|||||||+++|.|.++++||++|.+|+++|+++++|+...++...++++++|+....+++++.+.|||+++|++.++
T Consensus 1 ~rrVaItG~G~vtp~G~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~l~aa 80 (250)
T d2gfva1 1 KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDIISRKEQRKMDAFIQYGIVAG 80 (250)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTCSCCEEECCTTCCCTTTSCHHHHTTSCHHHHHHHHHH
T ss_pred CCeEEEECCeeECCCcCCHHHHHHHHHcCCCeeecCCcccccccCCccceecccchhhhhhhhHHHhhcCHHHHHHHHHH
Confidence 36899999999999999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred HHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHH-HhhhccCCCccccccccchhHHHHHHHhCCCCcccc
Q 008146 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYS 322 (576)
Q Consensus 244 ~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~t 322 (576)
++||+|||+..+ +++..++||++|++.++.......+..+ .......++..++....+.++++|++.||++||+++
T Consensus 81 ~~Al~dAg~~~~---~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~t 157 (250)
T d2gfva1 81 VQAMQDSGLEIT---EENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSIS 157 (250)
T ss_dssp HHHHHHHTCCCC---TTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHTTCCSCEEC
T ss_pred HHHHHhcCCCcc---ccCccceEEEEeeccCCcchhhhhHHHHhhccccccccchhhhhhhhHHHHHHHHHhCCCCCccc
Confidence 999999999876 6678899999999998888777766655 345677889999999999999999999999999999
Q ss_pred ccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceEEE
Q 008146 323 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 402 (576)
Q Consensus 323 v~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAaal 402 (576)
|+++|+||+.||++|+++|++|++|++||||+|..++|..+..|..++.|+..+.+|++.|||||.++||+++|||+++|
T Consensus 158 v~~aCaSg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~rdG~v~gEGaa~l 237 (250)
T d2gfva1 158 IATAQTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAGML 237 (250)
T ss_dssp CCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTCCSBCBBCEEEEE
T ss_pred cccccchhhhhhHHHHHHHHcCCcchhhcccchhhcCcHHHHHHHhcccccCCCCCCCCccCCCCCCCCCEeeeeEEEEE
Confidence 99999999999999999999999999999999999999999999999999988888889999999999999999999999
Q ss_pred EEcchHHHHhcCC
Q 008146 403 LLEELEHAKKRGA 415 (576)
Q Consensus 403 vL~~~~~A~~~g~ 415 (576)
|||++++|++||+
T Consensus 238 VLE~~~~A~~rGA 250 (250)
T d2gfva1 238 VLEEYEHAKKRGA 250 (250)
T ss_dssp EEEEHHHHHHHTC
T ss_pred EECcHHHHHHCcC
Confidence 9999999999985
|
| >d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=3.8e-47 Score=377.13 Aligned_cols=248 Identities=43% Similarity=0.787 Sum_probs=229.0
Q ss_pred CCcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 008146 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 243 (576)
Q Consensus 164 ~~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa 243 (576)
|+||||||||+++|.|.++++||++|.+|+++|.++++|+...++....+.+ ++++..++++++.+.|||++++++.++
T Consensus 1 M~rVaItG~G~vsp~g~~~~e~w~~l~~G~s~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~l~aa 79 (249)
T d1j3na1 1 MRRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITRFDASALPVRIAAEV-DVDPGAYLDRKELRRLDRFVQYALIAA 79 (249)
T ss_dssp CCCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECC-CCCGGGTSCHHHHTTSCHHHHHHHHHH
T ss_pred CCcEEEECCEeECCCcCCHHHHHHHHHcCCCccccCCccccccCCccccccc-cccccccccHHHHhhCCHHHHHHHHHH
Confidence 5689999999999999999999999999999999999999988887777665 455566789999999999999999999
Q ss_pred HHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHH-HhhhccCCCccccccccchhHHHHHHHhCCCCcccc
Q 008146 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYS 322 (576)
Q Consensus 244 ~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~t 322 (576)
++||+|||++++ ++++.|||||+|++.++......+.... .......+++.++....+..++++++.||++||+++
T Consensus 80 ~~Al~dAGl~~~---~~~~~~~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~gl~Gp~~t 156 (249)
T d1j3na1 80 QLALEDAGLKPE---DLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSST 156 (249)
T ss_dssp HHHHHHHTCCGG---GSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCBCC
T ss_pred HHHHHHcCCChh---HcCCccEEEEEEECCCcccccccccccccccCccccChhhhccccchhhhhhhHhhcCCCCCccc
Confidence 999999999987 6778899999999999988777666655 456677899999999999999999999999999999
Q ss_pred ccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceEEE
Q 008146 323 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 402 (576)
Q Consensus 323 v~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAaal 402 (576)
|+++|+||+.||++|+++|++|++|+|||||+|..++|..+..|...+.|++.+..|++.|||||.++||+++|||++++
T Consensus 157 v~~aCaSsl~Ai~~A~~~i~~G~~d~alvgg~d~~~~p~~~~~f~~~~~ls~~~~~p~~~~rPFd~~~dG~v~gEGa~~l 236 (249)
T d1j3na1 157 VVTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRDGFVMGEGAGVL 236 (249)
T ss_dssp BCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTCCCBCBBCEEEEE
T ss_pred cccccchHHHHHHHHHHHHHcCCCCeeeecchHhhhCcHHHHHHHhCCcccCCCCCCCCCCCCccCCCCCEeeEeEEEEE
Confidence 99999999999999999999999999999999999999999999999999988888899999999999999999999999
Q ss_pred EEcchHHHHhcCC
Q 008146 403 LLEELEHAKKRGA 415 (576)
Q Consensus 403 vL~~~~~A~~~g~ 415 (576)
|||++++|++||+
T Consensus 237 vLe~~~~A~~rGA 249 (249)
T d1j3na1 237 VLEAYEHAKKRGA 249 (249)
T ss_dssp EEEEHHHHHHTTC
T ss_pred EEccHHHHHHCcC
Confidence 9999999999985
|
| >d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=7.2e-47 Score=363.23 Aligned_cols=198 Identities=38% Similarity=0.590 Sum_probs=186.8
Q ss_pred CCCCCCCCCCccCCCcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCC
Q 008146 377 NDPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGV 456 (576)
Q Consensus 377 ~~p~~~~rpfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl 456 (576)
++|++.|||||.++|||++|||++++|||++++|+++|++||++|.|++.++|+.+.+.+.|++.++.++++++|+++++
T Consensus 1 ~~P~~~~rpFD~~adG~v~gEGa~~~vL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~a~i 80 (205)
T d1tqya2 1 DDPEHASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRT 80 (205)
T ss_dssp SCGGGCCCTTBTTCCCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCCCccCCCCCEeeEeeEEEEEEeEHHHHHHCCCceEEEEEeeEccccccccCcccccccccchhhhhHHhhhcC
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccEEEecCCCCccCcHHHHHHHHHHHcCC-CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCC
Q 008146 457 SREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPD 535 (576)
Q Consensus 457 ~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~-~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~ 535 (576)
+++||+|||+|||||+.+|++|+++|.++|+.. .+++|+++|+++||+++|||++++++++++|++|+|||++|+++++
T Consensus 81 ~~~~i~~ie~hgtGt~~~D~~E~~ai~~~~~~~~~~~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g~ipp~~~~~~~~ 160 (205)
T d1tqya2 81 DATDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSD 160 (205)
T ss_dssp CGGGCCEEECCCCCCHHHHHHHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCSBB
T ss_pred CccceeeeeccccccccCchhHHHHHHHhhccccCCceeeeecccccccccccchhHHHHHHHHHhCCeEcccCCCCCCC
Confidence 999999999999999999999999999999864 4689999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCcccccCccEEEEeccCCCcceeEEEEeeC
Q 008146 536 AVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~~ 575 (576)
+.+++++... +.+.++.+++++|||||||+|+|+||+++
T Consensus 161 p~~~~~~v~~-~~~~~~~~~a~~~s~GfGG~na~~vl~~~ 199 (205)
T d1tqya2 161 PECDLDYVPL-EARERKLRSVLTVGSGFGGFQSAMVLRDA 199 (205)
T ss_dssp TTBCSCCCBS-SCEECCCSEEEEEEEETTTEEEEEEEECH
T ss_pred CCCCcccCCC-CCcCCCCCEEEEeCCCCCceeEEEEEeeC
Confidence 9998876443 45567789999999999999999999986
|
| >d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=100.00 E-value=9.2e-46 Score=366.94 Aligned_cols=249 Identities=43% Similarity=0.764 Sum_probs=232.5
Q ss_pred CCcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 008146 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 243 (576)
Q Consensus 164 ~~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa 243 (576)
++||||||||+++|.|.++++||++|.+|+++|+++++|+...++....+.++.++....+++++.+.|||+++++++++
T Consensus 1 ~~rVaItG~G~v~p~G~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~~~~~~a~ 80 (250)
T d1e5ma1 1 KKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQFLDRKEAKRMDRFCHFAVCAS 80 (250)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCCSCCGGGTSCHHHHHTSCHHHHHHHHHH
T ss_pred CCeEEEECCeeECCCCCCHHHHHHHHHcCCCeeccCCccccccccccccceeeecccccccchhhhhhcCcHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999888889998888777899999999999999999999
Q ss_pred HHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHH-HhhhccCCCccccccccchhHHHHHHHhCCCCcccc
Q 008146 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYS 322 (576)
Q Consensus 244 ~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~t 322 (576)
.+||++||++++ .+...+++|++|++.+...........+ .......++..+.....+..+.++++.||++||+++
T Consensus 81 ~~Al~~Agl~~~---~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~~t 157 (250)
T d1e5ma1 81 QQAINDAKLVIN---ELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNC 157 (250)
T ss_dssp HHHHHHHTCCCC---TTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCEEC
T ss_pred HHHHHHcCCChH---hhcCCcceEEEEEeeccccchhhhhHHHhhcCccccCcccchhhhcchhhhhHHHhccCCCCCcc
Confidence 999999999976 6778999999999988887777766655 345567788888888999999999999999999999
Q ss_pred ccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceEEE
Q 008146 323 ISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVL 402 (576)
Q Consensus 323 v~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAaal 402 (576)
|+++|+||+.||++|+++|++|++|++||||+|..++|..+..|.+++.|+..+.+|++.|||||.++||+++|||+++|
T Consensus 158 v~~ACsS~l~Ai~~A~~~i~~G~~d~~lvGg~~~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~~dG~~~gEGa~~~ 237 (250)
T d1e5ma1 158 TVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRDGFVMGEGSGIL 237 (250)
T ss_dssp CCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCGGGTCCTTBTTCCSBCBBCEEEEE
T ss_pred ccccchhhhhhhHHHhhcccCCcccccccccchhhcCcHHHHHHHhcCCccCCCCCCCCccCCCCCCCCCEeeEeeEEEE
Confidence 99999999999999999999999999999999999999999999999999988888999999999999999999999999
Q ss_pred EEcchHHHHhcCC
Q 008146 403 LLEELEHAKKRGA 415 (576)
Q Consensus 403 vL~~~~~A~~~g~ 415 (576)
|||++++|++||+
T Consensus 238 vLe~l~~A~~rGA 250 (250)
T d1e5ma1 238 ILEELESALARGA 250 (250)
T ss_dssp EEEEHHHHHHTTC
T ss_pred EEeeHHHHHHCcC
Confidence 9999999999985
|
| >d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=7e-46 Score=352.91 Aligned_cols=193 Identities=27% Similarity=0.440 Sum_probs=177.3
Q ss_pred CCCCCCCCCccCCCcceecCceEEEEEcchHHHHhcCC-eeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCC
Q 008146 378 DPTKASRPWDINRDGFVMGEGAGVLLLEELEHAKKRGA-KIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGV 456 (576)
Q Consensus 378 ~p~~~~rpfd~~~~G~v~gEGAaalvL~~~~~A~~~g~-~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl 456 (576)
+|++.|||||.++|||++|||++++|||++++|+++|+ +||++|.|+++++|+.+.. +. ..++.++|+++|+++++
T Consensus 1 ~p~~~~rPFD~~a~G~~~gEGa~~~vLe~~~~A~~rg~~~i~a~i~g~~~~~d~~~~~-~~--~~g~~~~i~~aL~~a~i 77 (194)
T d1tqyb2 1 DPDRAYLPFDERAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGS-GR--PAGLERAIRLALNDAGT 77 (194)
T ss_dssp CGGGSCCTTSTTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTC-CC--CCSHHHHHHHHHHHHTC
T ss_pred CCCCCcCcccCCCCCEeeEeeEEEEEEeEHHHHHhcCCceeeeeeecccccccccccc-cc--hhhhhhhhhhhcccccc
Confidence 48889999999999999999999999999999999998 6999999999999987643 23 34578999999999999
Q ss_pred CCCCccEEEecCCCCccCcHHHHHHHHHHHcCCCCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCC
Q 008146 457 SREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDA 536 (576)
Q Consensus 457 ~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~ 536 (576)
+++||+|||+|||||+.+|.+|.++|.++|+.. .++|+++|+++||+++|||++++++++++|++|+|||++|+++|++
T Consensus 78 ~~~di~~v~ahgtGt~~~D~~E~~al~~~f~~~-~~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g~ipp~~~~~~~~~ 156 (194)
T d1tqyb2 78 GPEDVDVVFADGAGVPELDAAEARAIGRVFGRE-GVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPR 156 (194)
T ss_dssp CGGGCCEEECCCCCSHHHHHHHHHHHHHHHCTT-CSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCCCG
T ss_pred cccceeeeeccccCcccccHHHhhhhhhhhhcc-ccccccccccccccccccccceehhhhhhhhhceeccccCCCCCCc
Confidence 999999999999999999999999999999865 5899999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCcccccCccEEEEeccCCCcceeEEEEeeC
Q 008146 537 VVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~~ 575 (576)
.++.+++. .+++.++++++++|+|||||+|+|+||++|
T Consensus 157 ~~~~~~v~-~~~~~~~~~~a~v~s~GfgG~na~~vl~~~ 194 (194)
T d1tqyb2 157 EYGIDLVL-GEPRSTAPRTALVLARGRWGFNSAAVLRRF 194 (194)
T ss_dssp GGCCEECB-SSCBCCCCSEEEEEEEETTTEEEEEEEEEC
T ss_pred ccCccccC-CCCccCCCCEEEEECcCCCceeEEEEEeeC
Confidence 88877544 345566789999999999999999999998
|
| >d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6e-42 Score=339.96 Aligned_cols=250 Identities=35% Similarity=0.552 Sum_probs=217.4
Q ss_pred CCcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHH
Q 008146 164 QKRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 243 (576)
Q Consensus 164 ~~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa 243 (576)
|+||||||||+++|.|.++++||++|++|+++|+++++|+...++....+.++ +....++...+.+.+++..++.+.++
T Consensus 1 m~RVvITG~G~i~p~G~~~~~~w~~L~~G~sgi~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (253)
T d2vbaa1 1 MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLIDRKVVRFMSDASIYAFLSM 79 (253)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECHHHHHTTCSCCEEECCC-CCCTTSSCHHHHTTCCHHHHHHHHHH
T ss_pred CCcEEEEccEEECCCCCCHHHHHHHHHcCCCccccCCccccccCccccccccc-ccccccccchhhccchhhhhhhhHHH
Confidence 56899999999999999999999999999999999998888778777766664 34455578888999999999999999
Q ss_pred HHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHH--HhhhccCCCccccccccchhHHHHHHHhCCCCccc
Q 008146 244 KKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL--RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNY 321 (576)
Q Consensus 244 ~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~ 321 (576)
.+|++++|+..+. .....|+|+++|+..++..........+ .......+|+.++....+.++++|++.||++||++
T Consensus 80 ~~a~~~~~l~~~~--~~~~~r~g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g~~Gp~~ 157 (253)
T d2vbaa1 80 EQAIADAGLSPEA--YQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNY 157 (253)
T ss_dssp HHHHHHHTCCHHH--HTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTTTCCSCEE
T ss_pred HHHHHHhhccchh--ccCCCCEEEEeccccccccccccccccccccCCccccCchhhhccccccccceeccccCccccee
Confidence 9999999998753 3456799999999988877655544443 22345668888888999999999999999999999
Q ss_pred cccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhcc-CCCCCCCCCCCccCCCcceecCceE
Q 008146 322 SISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR-NNDPTKASRPWDINRDGFVMGEGAG 400 (576)
Q Consensus 322 tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~-~~~p~~~~rpfd~~~~G~v~gEGAa 400 (576)
+|+++|+||+.||++|+++|++|++|++||||+|....+ .+..|.+++.++.. +.+|++.|||||.+++||++|||++
T Consensus 158 ~i~taCaSsl~Ai~~A~~~i~~G~~d~alvgg~~~~~~~-~~~~~~~~~~ls~~~~~~P~~~~rPFD~~~~G~v~gEGa~ 236 (253)
T d2vbaa1 158 SISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWE-MACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGG 236 (253)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHH-HHHHHHHTTCBCCSCTTSGGGSCCTTBTTCCSBCBBCEEE
T ss_pred eeeccchhHHHHHHHHHHhcchhccceeeecchhhhhcc-hhhhHHHHHHHhcCCCCCCCCCCCCCCCCCCCEeeeeEEE
Confidence 999999999999999999999999999999999985544 56678888888753 5678999999999999999999999
Q ss_pred EEEEcchHHHHhcCCee
Q 008146 401 VLLLEELEHAKKRGAKI 417 (576)
Q Consensus 401 alvL~~~~~A~~~g~~i 417 (576)
+||||++++|++||++|
T Consensus 237 ~lvLe~le~A~~rGa~I 253 (253)
T d2vbaa1 237 MVVVEELEHALARGAHI 253 (253)
T ss_dssp EEEEEEHHHHHHTTCCC
T ss_pred EEEEccHHHHHHccCcC
Confidence 99999999999999986
|
| >d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=100.00 E-value=9.5e-39 Score=319.10 Aligned_cols=251 Identities=40% Similarity=0.667 Sum_probs=204.3
Q ss_pred CcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCC--CC------------CccccccccCCCCCCCCChh---
Q 008146 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCT--SF------------PTKIAAEIKSFSTDGWVAPK--- 227 (576)
Q Consensus 165 ~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~--~~------------~~~~~g~v~~fd~~~~i~~~--- 227 (576)
+||||||||+++|.|.++++||++|.+|+++|++++.+++. .+ +.++.++++.+.....+..+
T Consensus 1 rRVvITG~G~vsP~G~~~ee~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (270)
T d2ix4a1 1 RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGSNPGEFDEALWL 80 (270)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCGGGGCCTTSCHHHHHHHHHTCSCCEEECCCBSSSTTSBCHHHHS
T ss_pred CeEEEECceeECCCcCCHHHHHHHHHcCCCeeccCChhhcccccccccccccccccccceeeeecccccCchhhhHHHhh
Confidence 47999999999999999999999999999999998665433 22 23344555443332222333
Q ss_pred hhhcCCHHHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHH-HhhhccCCCccccccccchh
Q 008146 228 LSKRMDKFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMG 306 (576)
Q Consensus 228 ~a~~mdp~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~ 306 (576)
....+++....++.+..+|+++++..... .....++++.++...+............ ........++.++....+.+
T Consensus 81 ~~~~~~~~~~~a~~a~~~A~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (270)
T d2ix4a1 81 NSKAVANFIGYAVCAADEALRDAEWLPTE--EEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMA 158 (270)
T ss_dssp CSTTCCHHHHHHHHHHHHHHHHTTCCCCS--HHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHH
T ss_pred hhhhhhhhHHHHHHHHHHHHHHhhhcccc--ccccccceEEeeccccccccchhhcchhhhccccccCcccCcccccchh
Confidence 23467788888999999999999875421 3334566777776665554444433333 34456778888899999999
Q ss_pred HHHHHHHhCCCCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhcc-CCCCCCCCCC
Q 008146 307 SAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR-NNDPTKASRP 385 (576)
Q Consensus 307 a~~ia~~lgl~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~-~~~p~~~~rp 385 (576)
+++|++.||++||+++|+++|+||+.||++|+++|++|+||+|||||+|..+.|..+..|..+++|+.. +.+|++.|||
T Consensus 159 a~~is~~~~l~Gp~~~v~~aCaSsl~Ai~~A~~~l~~G~~d~aivgg~~~~~~p~~~~~~~~~~~ls~~~~~~p~~~~rP 238 (270)
T d2ix4a1 159 SGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRP 238 (270)
T ss_dssp HHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGGSCCT
T ss_pred HHHHHHHhCCCCCCcccccccchhhHHHHHHHHHHHcCCCCeeccccchhhhhhhhHHHHHhcccccCCCCCCCCCccCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999864 4678899999
Q ss_pred CccCCCcceecCceEEEEEcchHHHHhcCCee
Q 008146 386 WDINRDGFVMGEGAGVLLLEELEHAKKRGAKI 417 (576)
Q Consensus 386 fd~~~~G~v~gEGAaalvL~~~~~A~~~g~~i 417 (576)
||++++|+++|||++++|||++++|++||++|
T Consensus 239 FD~~a~G~v~gEGaa~~vLe~l~~A~~rG~~I 270 (270)
T d2ix4a1 239 FDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKI 270 (270)
T ss_dssp TBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCC
T ss_pred CCCCCCCEeeEeeEEEEEEeeHHHHHHccCCC
Confidence 99999999999999999999999999999986
|
| >d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=100.00 E-value=2.1e-39 Score=298.78 Aligned_cols=160 Identities=50% Similarity=0.770 Sum_probs=150.5
Q ss_pred eeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCC-CCccc
Q 008146 416 KIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRV 494 (576)
Q Consensus 416 ~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~-~~~~v 494 (576)
+||++|+|+++++|+++.+.+.|++.++.++|++||+++|++|+||+|||+|||||+.+|.+|..+|.++|+.. .+++|
T Consensus 1 rIya~i~G~~~~~Dg~~~~~~~p~g~~~~~~i~~Al~~a~i~~~~i~~v~~HgtGT~~~D~~E~~al~~vf~~~~~~~~v 80 (161)
T d1e5ma2 1 KIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAV 80 (161)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGGSEE
T ss_pred CEEEEEeeEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHcCCChhhcceEEEeccCCcccchHHhhhhhhccccCCCcceE
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999864 46899
Q ss_pred ccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 495 NSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 495 ~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
+++|+++||+++|||++++++++++|++++|||++|+++|++.++..... .+...+..+++++|||||||+|+|+||+|
T Consensus 81 ~s~K~~~GH~~~AsG~~~l~~~l~~~~~g~ipp~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~nsfGfGG~Na~lvl~~ 159 (161)
T d1e5ma2 81 SSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDYVP-GQSRALIVDVALSNSFGFGGHNVTLAFKK 159 (161)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCSCCCB-SSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred EecccccccccccchhhHHHHhHHhcccCeeCCccCCCCCCCCCCcccCc-CcccCCCCCEEEEeCcCcCcEeEEEEEee
Confidence 99999999999999999999999999999999999999999998876543 34566778999999999999999999999
Q ss_pred CC
Q 008146 575 YK 576 (576)
Q Consensus 575 ~~ 576 (576)
||
T Consensus 160 y~ 161 (161)
T d1e5ma2 160 YQ 161 (161)
T ss_dssp CC
T ss_pred eC
Confidence 97
|
| >d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=6.3e-39 Score=294.53 Aligned_cols=158 Identities=44% Similarity=0.707 Sum_probs=149.4
Q ss_pred eeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCCCcccc
Q 008146 416 KIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVN 495 (576)
Q Consensus 416 ~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~~~~v~ 495 (576)
+||++|+|+++++|++|++.|+|++.++.++|+++|+++|++|+||+|||+|||||+.+|.+|..+|.++|+.. ++++
T Consensus 1 tIyaei~G~~~~~Dg~~~~~p~p~g~~~~~~~~~al~~a~l~p~~i~~v~aHgtgT~~~D~~E~~ai~~~fg~~--~~v~ 78 (158)
T d1ox0a2 1 TILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLGKE--VPVS 78 (158)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHHHHHHCSS--SEEE
T ss_pred CEEEEEEEEEEcCCCCCCcCCCCCHHHHHHHHHHhhccccccceeeeEEeeeccccccchhHHHHHHHHhcCCc--ccCc
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999864 8999
Q ss_pred cccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEeeC
Q 008146 496 STKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 496 s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~~ 575 (576)
++|+++||+++|||++++++++++|++++|||++|+++|++.++.++... +....+++++++|||||||+|+|+||++|
T Consensus 79 s~Ks~iGH~~~asG~~~l~~~l~~l~~g~iPp~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~nsfGfGG~Na~lvl~~~ 157 (158)
T d1ox0a2 79 STKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANVVYG-QGLEKEIPYAISNTFGFGGHNAVLAFKRW 157 (158)
T ss_dssp CTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCCSEECBS-SCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred CcccccccchhhhhhhhhcccccccccceeccccCCCCCCcccCcccccC-ccccCCCCEEEEeCcCCCcEeEEEEEEec
Confidence 99999999999999999999999999999999999999999998876543 45556789999999999999999999999
Q ss_pred C
Q 008146 576 K 576 (576)
Q Consensus 576 ~ 576 (576)
+
T Consensus 158 ~ 158 (158)
T d1ox0a2 158 E 158 (158)
T ss_dssp C
T ss_pred C
Confidence 7
|
| >d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=3.7e-38 Score=290.69 Aligned_cols=159 Identities=48% Similarity=0.740 Sum_probs=146.9
Q ss_pred eeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCC-CCccc
Q 008146 416 KIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRV 494 (576)
Q Consensus 416 ~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~-~~~~v 494 (576)
+||++|+|+++++||.+.+.++|++.++.++++++|+++|++|+||+|||+|||||+++|++|..+|.++|+.. .+++|
T Consensus 1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~a~i~p~~i~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i 80 (161)
T d2gfva2 1 KIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLV 80 (161)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGTTSEE
T ss_pred CEEEEEeeEEEeCCCCCCCCCCCCHHHHHHHHHHhHhhcccCcceEEEEEeecccCcccHHHHHHHHHHHhcccccccee
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999865 46899
Q ss_pred ccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 495 NSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 495 ~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
+++|+++||+++|||++++++++++|++++|||++|+++|++.+..........+...++++++|||||||+|+|+||++
T Consensus 81 ~s~Ks~~GH~~~AsG~~~li~~ll~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~vnsfGfgG~Na~lil~~ 160 (161)
T d2gfva2 81 SSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKK 160 (161)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHSCEECCBTTCSSBCTTCCSBCCBSSCEECSSCCEEEEEEEEGGGEEEEEEEEC
T ss_pred ccccccccccHHHHHHHHHHHHHHHhcCCEecccccccccccccccccccccCccCCCCcEEEEeCcCccceeEEEEEEE
Confidence 99999999999999999999999999999999999999999988776544433333457899999999999999999997
|
| >d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=100.00 E-value=1.8e-37 Score=285.99 Aligned_cols=157 Identities=44% Similarity=0.721 Sum_probs=147.5
Q ss_pred eEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCC---CCccc
Q 008146 418 YAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN---RGLRV 494 (576)
Q Consensus 418 ~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~---~~~~v 494 (576)
|++|+|+++++|+++++.|+|+++++..+|+++|++++++|+||+|||+|||||+++|++|+.+++++|+.. .+++|
T Consensus 1 Y~~i~G~~~~~Dg~~~t~p~~~g~~~~~~~~~al~~a~~~~~di~yveaHGtGT~~gD~~E~~al~~~~~~~~~~~~~~i 80 (161)
T d2ix4a2 1 YAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAF 80 (161)
T ss_dssp CEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEE
T ss_pred CeEEEEEEEcCCCCCCcCCChhHHHHHHHHHHHHHhcCCCccccCEEEEeccCCCCCcHHHHhhhHhhhcccccccceee
Confidence 899999999999999999999999999999999999999999999999999999999999999999999753 46899
Q ss_pred ccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 495 NSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 495 ~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
+++|+++||+++|||++++++++++|+++.+||++|+++|++.++.......+.++..+|++++|||||||+|+|+||++
T Consensus 81 ~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfgG~Na~lvl~~ 160 (161)
T d2ix4a2 81 SSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFAS 160 (161)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTTCCSSSCCCSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred eccccccCCccchHHHHHHHHHHHHHhcCCCCCccCCCCCCcccCcccCccccCCCCCcCEEEEeCCcccceeEEEEEEe
Confidence 99999999999999999999999999999999999999999999887655555666678999999999999999999986
|
| >d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=2.5e-37 Score=284.36 Aligned_cols=157 Identities=54% Similarity=0.820 Sum_probs=146.6
Q ss_pred eeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCC-CCccc
Q 008146 416 KIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRV 494 (576)
Q Consensus 416 ~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~-~~~~v 494 (576)
+||++|+|+++++|+++.+.+.|++.++..+++++|+++|++|+||||||+|||||+.+|++|+.+|.++|+.. .+++|
T Consensus 1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~agi~p~~I~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i 80 (159)
T d1j3na2 1 RIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKRLMV 80 (159)
T ss_dssp CCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred CEEEEEeEEEEeCCCCCCCCCCcCHHHHHHHhhccHhhcCCCHHHcCeEeccccCCccchHHHHHHHHHHHHhcCCCceE
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999753 45889
Q ss_pred ccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 495 NSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 495 ~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
++.|+++||+++|||++++++++++|++++|||++|+++|++.++..+.. +++..+++++++|||||||+|+|+||++
T Consensus 81 ~s~K~~~GH~~~asG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~--~~~~~~~~~a~v~sfGfgG~Na~~vl~k 158 (159)
T d1j3na2 81 SSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDFVP--EPREAKVDYALSNSFAFGGHNAVLAFKR 158 (159)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCSBCCS--SCEECCCSEEEEEEECTTSEEEEEEEEC
T ss_pred ecccccccccccccccchhhhhhhHhhCCEeccccccccccceeeeeccC--cccCCCCCEEEEeCCCCCceeEEEEEEE
Confidence 99999999999999999999999999999999999999999988776543 3445678999999999999999999997
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=2.7e-36 Score=290.27 Aligned_cols=204 Identities=23% Similarity=0.368 Sum_probs=191.6
Q ss_pred EEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHHHH
Q 008146 167 VVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKA 246 (576)
Q Consensus 167 IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa~eA 246 (576)
|||||||+++|.|.++++||++|.+|+++|+++++|+...++..+.+++++|+...++++++.+.|||++++++.++.+|
T Consensus 2 VvITG~G~vsp~g~~~~~~w~~L~~G~sgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~A 81 (208)
T d1tqyb1 2 VLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDDFHAPDHIPGRLLPQTDPSTRLALTAADWA 81 (208)
T ss_dssp EEEEEEEEEETTEESHHHHHHHHHTTCCCEEECTTTTGGGSSCCEEECCCSCCHHHHSCTTTGGGCCHHHHHHHHHHHHH
T ss_pred EEEEcceeECCCcCCHHHHHHHHHcCCCceecCcccCchhcccccccccccccccccCChhHhhcccccccccccccccc
Confidence 89999999999999999999999999999999999999999999999999998888899999999999999999999999
Q ss_pred HHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHH-hhhccCCCccccccccchhHHHHHHHhCCCCccccccC
Q 008146 247 LADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALR-ISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSIST 325 (576)
Q Consensus 247 L~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv~t 325 (576)
|+|||++++ ++...++|+++|++.++.....+.+..+. ...+..+|+.++....++.+++|++.||++||+++|++
T Consensus 82 l~~Ag~~~~---~~~~~~~g~~~g~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~tv~t 158 (208)
T d1tqyb1 82 LQDAKADPE---SLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSSALVA 158 (208)
T ss_dssp HHHTTCCGG---GSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTCCSSCEEEEC
T ss_pred chhhhcccc---cccccccccccccccccccccchhhhhhccccccccccccccccccccccchhhhcccccceeeeccc
Confidence 999999987 67788999999999999988887777664 45567888888899999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhc
Q 008146 326 ACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQ 374 (576)
Q Consensus 326 aCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~ 374 (576)
+|+||+.||+.|+++|++| +|+|||||+|..++|..+.+|.++++||+
T Consensus 159 ACaS~l~Ai~~A~~~I~~G-~d~~lvGG~d~~l~p~~~~~f~~~~~lSt 206 (208)
T d1tqyb1 159 EQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRIST 206 (208)
T ss_dssp GGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTTSCBCC
T ss_pred cccHHHHHHHHHHHHHHcC-CCEEEECccccccCHHHHHHHHHcCCCCC
Confidence 9999999999999999999 99999999999999999999999999984
|
| >d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=9.3e-35 Score=281.06 Aligned_cols=208 Identities=27% Similarity=0.414 Sum_probs=183.9
Q ss_pred CcEEEEecceecCCCCCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHH
Q 008146 165 KRVVVTGMGLVSPLGHEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGK 244 (576)
Q Consensus 165 ~~IaItGmg~~~P~g~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa~ 244 (576)
+||||||||+++|.|.++++||++|.+|+++|++++.|+...+...+....+.+...+++++++.+.||+.++|++.+++
T Consensus 1 rRVvItG~G~v~p~G~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~ 80 (216)
T d1tqya1 1 RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEADFDPVAEGFGPRELDRMDRASQFAVACAR 80 (216)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECCCCCHHHHTCCHHHHHHSCHHHHHHHHHHH
T ss_pred CeEEEEeceeECCCCCCHHHHHHHHHcCCCEeecCCccCCCcccccccccccccccccccChhhhcccCcchhhHHHHHH
Confidence 57999999999999999999999999999999999999887776666555443334455999999999999999999999
Q ss_pred HHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhh-------hccCCCccccccccchhHHHHHHHhCCC
Q 008146 245 KALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRIS-------YKKMNPFCVPFATTNMGSAMLAMDLGWM 317 (576)
Q Consensus 245 eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~a~~ia~~lgl~ 317 (576)
+||+|||++++ ++...++++++|++.++.....+.+..+... .....++.++..+.+.++.++++.+|++
T Consensus 81 ~Al~dAg~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g~~ 157 (216)
T d1tqya1 81 EAFAASGLDPD---TLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAE 157 (216)
T ss_dssp HHHHHHTCCTT---TCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHHHHHHTCC
T ss_pred HHHHHhcCCcc---ccccccccccccccccccchhhHHHhhhhhcccccccchhhcccccccccCchHHHHHHHHhcCcc
Confidence 99999999986 6778999999999999988877777766432 2345566677778899999999999999
Q ss_pred CccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhcc
Q 008146 318 GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQR 375 (576)
Q Consensus 318 Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~ 375 (576)
||+++|+++|+||+.||++|+++|++|++|+|||||+|..++|..+.+|.+++.||++
T Consensus 158 Gp~~tv~~ACaS~~~Ai~~A~~~i~~G~~d~~ivGG~d~~l~p~~~~~F~~~~alS~~ 215 (216)
T d1tqya1 158 GPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTAR 215 (216)
T ss_dssp SCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC
T ss_pred ccceeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHCCCCCcC
Confidence 9999999999999999999999999999999999999999999999999999999854
|
| >d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=3.7e-34 Score=260.45 Aligned_cols=150 Identities=39% Similarity=0.657 Sum_probs=134.9
Q ss_pred eEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCCCcccccc
Q 008146 418 YAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNST 497 (576)
Q Consensus 418 ~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~~~~v~s~ 497 (576)
|++|+|++.++|+++++ .|++.++.++|+++|+++ ++||||||+|||||+++|++|..+|.++|+.+ .++|++.
T Consensus 1 Yaei~G~g~~~Dg~~~t--aP~~~~~~~~~~~al~~a---~~~I~~v~aHgtGT~~gD~~E~~Al~~vfg~~-~~~v~s~ 74 (151)
T d2vbaa2 1 YAEIVGYGATSDGADMV--APSGEGAVRCMKMAMHGV---DTPIDYLNSHGTSTPVGDVKELAAIREVFGDK-SPAISAT 74 (151)
T ss_dssp CEEEEEEEEEECCSCTT--SCCSHHHHHHHHHHHTTC---CSCCCEEECCCCSCHHHHHHHHHHHHHHHTTC-CCEEECT
T ss_pred CEEEEEEEEecCCCCCC--CcCHHHHHHHHHHhhhcC---cccceeEEEeccCCccccHHHHHHHHHHhCCC-Ccccccc
Confidence 89999999999998876 467889999999999876 57899999999999999999999999999865 4789999
Q ss_pred cccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 498 KSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 498 K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
|+++||+++|||++++++++++|+++++||++|++++++.+....++ .+..+++++.+++|||||||+|+|+||++
T Consensus 75 K~~~GH~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~v~-~~~~~~~~~~a~~nsfGfGG~Na~~vl~~ 150 (151)
T d2vbaa2 75 KAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIV-TETTDRELTTVMSNSFGFGGTNATLVMRK 150 (151)
T ss_dssp HHHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTCTTSEEC-CSCEECCCCEEEEEEEETTTEEEEEEEEC
T ss_pred hhhccccccchhhhhhhHHHHHHHcCCcccccCcccccccccccccc-CcCcCCCCCEEEEeCCcccceeEEEEEEE
Confidence 99999999999999999999999999999999999999876543333 34556788999999999999999999997
|
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.56 E-value=5.7e-14 Score=145.12 Aligned_cols=323 Identities=13% Similarity=0.120 Sum_probs=182.8
Q ss_pred EEEEecceecCCC-CCHHHHHHHHHcCCCcceeccC----CCCCCCCccccccccCCCCC----CCCChhhhhc----CC
Q 008146 167 VVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIET----FDCTSFPTKIAAEIKSFSTD----GWVAPKLSKR----MD 233 (576)
Q Consensus 167 IaItGmg~~~P~g-~~~~~~w~~L~~G~~~i~~~~~----~~~~~~~~~~~g~v~~fd~~----~~i~~~~a~~----md 233 (576)
.+|+|+|..+|.- .+.+++++.+..-.......++ +...+...+... .++.+.. ...++...++ ..
T Consensus 12 a~I~g~g~~~P~~~v~n~e~~~~~~~~~~~~~~~~~~~ri~~~tGI~~R~~~-~~~~~~~~~~~~~~~~~~~~r~~~~~e 90 (372)
T d1teda_ 12 AVIEGLATGTPRRVVNQSDAADRVAELFLDPGQRERIPRVYQKSRITTRRMA-VDPLDAKFDVFRREPATIRDRMHLFYE 90 (372)
T ss_dssp EEEEEEEEECCSCEEEHHHHHHHHHTC----CCTTHHHHHHHTSCCSEEECS-SCTTSTTHHHHTTCSSCHHHHHHHHHH
T ss_pred EEEEEEEEeCCCeEEcHHHHHHHHHhhcCChHHHHHHHHHHHccCCccccee-ccccccchhhhhhcCCCHHHHHHHHHh
Confidence 5799999999987 6778888877542111000000 001111111100 0011100 0011111111 12
Q ss_pred HHHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHH
Q 008146 234 KFMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMD 313 (576)
Q Consensus 234 p~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~ 313 (576)
....|+.+|+++||+++|+++++|+ -|+++++. + ...+..+.+++..
T Consensus 91 ~~~~la~~Aa~~aL~~ag~~~~dId-------~lI~~t~t-~-------------------------~~~P~~a~~v~~~ 137 (372)
T d1teda_ 91 HAVPLAVDVSKRALAGLPYRAAEIG-------LLVLATST-G-------------------------FIAPGVDVAIVKE 137 (372)
T ss_dssp HHHHHHHHHHHHHHTTCCCCGGGEE-------EEEEEESS-C-------------------------CCSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEeccC-C-------------------------CCCchHHHHHHhh
Confidence 3457999999999999999998666 45555432 1 1234567899999
Q ss_pred hCCCCcc--cccc-CCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCC
Q 008146 314 LGWMGPN--YSIS-TACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINR 390 (576)
Q Consensus 314 lgl~Gp~--~tv~-taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~ 390 (576)
||++... +.+. .||++++.||..|..+|++|..+.+||+++|.+...... .+ . ++...
T Consensus 138 LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~l~sg~~~~~LVV~~E~~s~~~~~---------------~d---~-~~~~~ 198 (372)
T d1teda_ 138 LGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCSVNAVF---------------AD---D-INDVV 198 (372)
T ss_dssp HTCCTTCEEEEEESCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEECGGGCCC---------------CS---S-HHHHH
T ss_pred hccCCceeEeeccccCccHHHHHHHHHHHHHhcCCCccceeeeehhhcccccC---------------CC---c-chhhh
Confidence 9997532 3343 589999999999999999999999999999963211000 00 0 00111
Q ss_pred CcceecCceEEEEEcchHHHHhcCCeeeEEEEEEEEe-cCCC-CC---C--------CCCCC-----hHHHHHHHHHHHH
Q 008146 391 DGFVMGEGAGVLLLEELEHAKKRGAKIYAEFRGGSFT-SDAY-HM---T--------EPHPD-----GVGVILCIEKALA 452 (576)
Q Consensus 391 ~G~v~gEGAaalvL~~~~~A~~~g~~i~a~I~g~~~~-~dg~-~~---~--------~~~p~-----~~~~~~ai~~AL~ 452 (576)
..+++||||+|+||++.+..... ......+.+.... .... .. . ...+. ......+++++|+
T Consensus 199 ~~~lfGDGAaA~ll~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~ 277 (372)
T d1teda_ 199 IHSLFGDGCAALVIGASQVQEKL-EPGKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLW 277 (372)
T ss_dssp HHHHBCEEEEEEEEEEECTTSCC-CTTCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhcccceeEEeccCCccccc-CCceeEEecccccccCCCccccccCCCCCcceeechHHHHHHHHHHHHHHHHHHHH
Confidence 23568999999999865432211 1122333333221 1100 00 0 00111 3446788999999
Q ss_pred HcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCCC-ccc-ccccccccccccchhHHHHHHHHHHHHcCCCCCCCC
Q 008146 453 HSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRG-LRV-NSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNIN 530 (576)
Q Consensus 453 ~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~~-~~v-~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~ 530 (576)
++|++++|||++..|-.+..+ .+.+.+.++-..+ +.. ..+-..+||+.+|+=.+.| -..++++.+.
T Consensus 278 ~~gl~~~did~~i~Hq~~~~i-----~~~i~~~Lgl~~ek~~~s~~~l~~~GN~~sasip~~L---~~~l~~g~~~---- 345 (372)
T d1teda_ 278 DNGLQISDIDLWAIHPGGPKI-----IEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVL---ETMVQQAESA---- 345 (372)
T ss_dssp HTTCCGGGCSCEEECCSCHHH-----HHHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHH---HHHHHSCSSS----
T ss_pred hcCCCHHHhhhhhccCccHHH-----HHHHHHHcCCCHHHhhhhHHHHhccCCcHHHHHHHHH---HHHHHhCCCC----
Confidence 999999999999999776543 3345555553321 111 1122346998766533222 2344543320
Q ss_pred CCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEeeC
Q 008146 531 LENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 531 ~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~~ 575 (576)
...+.++..+||-|=+-..++|+.-
T Consensus 346 --------------------~g~d~vll~~fG~G~s~~~~ll~~~ 370 (372)
T d1teda_ 346 --------------------KAISTGVAFAFGPGVTVEGMLFDII 370 (372)
T ss_dssp --------------------SSSEEEEEEEEETTTEEEEEEEEEC
T ss_pred --------------------CCCCEEEEEEEcHHHhHHHHhheee
Confidence 1224566778998777888888764
|
| >d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=99.23 E-value=2e-11 Score=119.07 Aligned_cols=93 Identities=16% Similarity=0.139 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHh-CCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 236 MLYLLTAGKKALAD-GGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 236 ~rl~l~aa~eAL~d-AGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
..|+..+++++|++ +|+++++|+ .|++|+.... ......++..++...
T Consensus 31 ~dL~~~~i~~~l~r~agi~~~~Id-------~vi~G~v~~~------------------------~~~g~n~aR~~al~a 79 (262)
T d1wdkc1 31 EDMSAHLISKVLERNSKVDPGEVE-------DVIWGCVNQT------------------------LEQGWNIARMASLMT 79 (262)
T ss_dssp HHHHHHHHHHHHHHCTTSCGGGEE-------EEEEECSSBS------------------------BTTTTTHHHHHHTTS
T ss_pred HHHHHHHHHHHHHhcCCCCHHHee-------EEEEEeeccc------------------------ccccccchhhhHhhh
Confidence 46888999999994 999998777 6999976421 111233566777777
Q ss_pred CCC--CccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccc
Q 008146 315 GWM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI 359 (576)
Q Consensus 315 gl~--Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~ 359 (576)
|+- -|.++|+..|+||+.||..|++.|++|+.|++|+||+|.|..
T Consensus 80 g~p~~vp~~tV~~~C~Sgl~Ai~~aa~~I~sG~~dvvlAgGvEsmS~ 126 (262)
T d1wdkc1 80 QIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGH 126 (262)
T ss_dssp SSCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTT
T ss_pred hcccccchhhccccccHHHHHHHHHHHHHHhhcCCceeeeccccccc
Confidence 763 489999999999999999999999999999999999998754
|
| >d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=99.18 E-value=5.6e-11 Score=116.32 Aligned_cols=92 Identities=16% Similarity=0.237 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
..|+..++.++|+++|+++++|| .|++|+... ......++.+++...|
T Consensus 28 ~dL~~~~~~~~l~~~~i~~~~Id-------~vi~G~~~~-------------------------~~~~~n~ar~~al~ag 75 (268)
T d1m3ka1 28 HELGATVISAVLERAGVAAGEVN-------EVILGQVLP-------------------------AGEGQNPARQAAMKAG 75 (268)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSCC-------------------------TTSCSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCc-------EEEEeeccc-------------------------cCcchHHHhHHHHHhC
Confidence 46889999999999999999777 699998641 1123346778888888
Q ss_pred CC--CccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccc
Q 008146 316 WM--GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVI 359 (576)
Q Consensus 316 l~--Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~ 359 (576)
+- -|.++|+..|+||+.||.+|++.|++|++|++|+||+|.+..
T Consensus 76 lp~~vpa~tv~~~C~Sg~~Ai~~Aa~~I~~G~~dvvlagG~EsmS~ 121 (268)
T d1m3ka1 76 VPQEATAWGMNQLAGSGLRAVALGMQQIATGDASIIVAGGMESMSM 121 (268)
T ss_dssp CCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTT
T ss_pred CcccccceeecccCcccchHHHHHHHHHhCCCceEEeecccccccc
Confidence 84 489999999999999999999999999999999999999763
|
| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=99.16 E-value=1.1e-11 Score=113.84 Aligned_cols=119 Identities=20% Similarity=0.300 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
...|+.+++.+||+++|+++++|+ -|++++..+ ....+..+..+...|
T Consensus 51 ~~~la~~Aa~~al~~a~~~~~~Id-------~li~~s~~~-------------------------~~~~P~~a~~v~~~L 98 (174)
T d1hnja1 51 VSTMGFEAATRAIEMAGIEKDQIG-------LIVVATTSA-------------------------THAFPSAACQIQSML 98 (174)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSCC-------------------------SCSSSCHHHHHHHHH
T ss_pred chHHHHHHHHHhhhhccccccccc-------EEEEecCCc-------------------------cccccchhhhhhhcc
Confidence 467999999999999999998666 567776542 223455688999999
Q ss_pred CCCC-ccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcc
Q 008146 315 GWMG-PNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGF 393 (576)
Q Consensus 315 gl~G-p~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~ 393 (576)
|++. +++.|+.+|++++.||..|..+|++|.++.+|++++|... . .+. +++....+
T Consensus 99 gl~~~~~~di~~~C~g~~~al~~A~~~i~sg~~~~~Lvv~~e~~S-~----------~~~------------~~d~~~~~ 155 (174)
T d1hnja1 99 GIKGCPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVLA-R----------TCD------------PTDRGTII 155 (174)
T ss_dssp TCCSSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECHH-H----------HSC------------TTCHHHHT
T ss_pred CCCchhhhhhhhhhccHHHHHHHHHHHHhcCCcceeEEEeeehhh-c----------ccC------------CCCCCeEE
Confidence 9975 8999999999999999999999999999999999999732 1 111 11112345
Q ss_pred eecCceEEEEEcchH
Q 008146 394 VMGEGAGVLLLEELE 408 (576)
Q Consensus 394 v~gEGAaalvL~~~~ 408 (576)
++||||+|+||++.+
T Consensus 156 lfGDgA~A~vl~~~~ 170 (174)
T d1hnja1 156 IFGDGAGAAVLAASE 170 (174)
T ss_dssp TBCCEEEEEEEEEES
T ss_pred EeceeeEEEEEEeCC
Confidence 789999999999754
|
| >d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=99.15 E-value=1.4e-10 Score=113.93 Aligned_cols=92 Identities=16% Similarity=0.190 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhC
Q 008146 236 MLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLG 315 (576)
Q Consensus 236 ~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 315 (576)
..|+..+++++|+++|+++++|| .|++|+.... +.....++..++...|
T Consensus 25 ~dL~~~a~~~al~~~~i~~~~Id-------~vi~G~v~~~------------------------g~~~~n~aR~~al~aG 73 (273)
T d1ulqa1 25 DDLLAHALSVLVDRSGVPKEEVE-------DVYAGCANQA------------------------GEDNRNVARMALLLAG 73 (273)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSCCS------------------------STTTTTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccc------------------------ccccccHHHHHHHHcC
Confidence 45788999999999999998777 6999976421 1112346777888888
Q ss_pred C--CCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEecccccc
Q 008146 316 W--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAV 358 (576)
Q Consensus 316 l--~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~ 358 (576)
+ .-|.++|+..|+||+.||.+|++.|++|+.|++|+||+|.|.
T Consensus 74 lp~~vp~~tVn~~CaSg~~Ai~~a~~~I~~G~~d~~lagG~EsmS 118 (273)
T d1ulqa1 74 FPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMS 118 (273)
T ss_dssp CCTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESS
T ss_pred CCCccceEEEecccchHHHHHHHHHHHHhcCCCccceeeeccccc
Confidence 8 349999999999999999999999999999999999999865
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=99.14 E-value=1.7e-11 Score=112.17 Aligned_cols=119 Identities=16% Similarity=0.255 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
...|+.+++++||+++|+++++|+ -|++++.. +....+..+..++..|
T Consensus 49 ~~~ma~~Aa~~aL~~agi~~~dId-------lli~~s~t-------------------------~~~~~p~~a~~v~~~L 96 (172)
T d1ub7a1 49 TSDLAFKAVEDLLRRHPGALEGVD-------AVIVATNT-------------------------PDALFPDTAALVQARF 96 (172)
T ss_dssp HHHHHHHHHHHHHHHSTTTTTTEE-------EEEEECSS-------------------------CSEEESCHHHHHHHHT
T ss_pred ccHHHHHHHHHHHhhcCcccccce-------EEEEeccc-------------------------ccccccchHHHHHHHh
Confidence 567899999999999999997665 45555543 2223455678899999
Q ss_pred CCCCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcce
Q 008146 315 GWMGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFV 394 (576)
Q Consensus 315 gl~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v 394 (576)
|.+.+++.|..+|++++.+|+.|..+|++|..+.+|++++|.+..- +. |++....++
T Consensus 97 g~~~~~~di~~~C~g~~~al~~a~~~~~~~~~~~~Lvv~~e~~S~~-----------~~------------~~d~~~~~l 153 (172)
T d1ub7a1 97 GLKAFAYDLLAGCPGWIYALAQAHALVEAGLAQKVLAVGAEALSKI-----------ID------------WNDRATAVL 153 (172)
T ss_dssp TCCCEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGT-----------SC------------TTCHHHHTT
T ss_pred ccCccceeehhccccHHHHHHHHhhhhhcCCcceeEEecccccccc-----------cC------------CCCcCeEEE
Confidence 9988999999999999999999999999999999999999973211 00 122233567
Q ss_pred ecCceEEEEEcchH
Q 008146 395 MGEGAGVLLLEELE 408 (576)
Q Consensus 395 ~gEGAaalvL~~~~ 408 (576)
+||||+|+||++.+
T Consensus 154 fGDgAaA~ll~~~~ 167 (172)
T d1ub7a1 154 FGDGGGAAVVGKVR 167 (172)
T ss_dssp BCCEEEEEEEECCC
T ss_pred ecceeEEEEEEEcC
Confidence 89999999998754
|
| >d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=99.12 E-value=1.1e-10 Score=107.60 Aligned_cols=118 Identities=20% Similarity=0.302 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
...|+.+|+++||+++|+++++|+ .|++++.. +.......+..++..+
T Consensus 58 ~~~ma~~Aa~~aL~~a~~~~~dId-------~li~~s~~-------------------------~~~~~p~~a~~v~~~l 105 (181)
T d1mzja1 58 IQVMGVAASRRALEHAGVDPAEID-------LVVVSTMT-------------------------NFVHTPPLSVAIAHEL 105 (181)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSC-------------------------CCCCSSCHHHHHHHHH
T ss_pred HHHHhHHHHHhhhhhccCChhHCe-------EEEEeccC-------------------------CccccccHHHHHHHhh
Confidence 467999999999999999998665 56666643 2222344577888889
Q ss_pred CCC-CccccccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcc
Q 008146 315 GWM-GPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGF 393 (576)
Q Consensus 315 gl~-Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~ 393 (576)
+.. ..++.|+.+|++++.||+.|..+|++|..+.+||+++|.+. + .+. +++....+
T Consensus 106 ~~~~~~~~Dv~~~C~g~~~aL~~A~~~i~~~~~~~~LvV~~e~~s-~----------~~~------------~~d~~~~~ 162 (181)
T d1mzja1 106 GADNAGGFDLSAACAGFCHALSIAADAVESGGSRHVLVVATERMT-D----------VID------------LADRSLSF 162 (181)
T ss_dssp TCTTCEEEEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEEGG-G----------GSC------------SSCTTTTT
T ss_pred cCCCccceeHHhhhccHHHHHHHHhCHhhcCCCceeEEeeecccc-c----------cCC------------CCCcceEE
Confidence 985 48899999999999999999999999999999999999732 1 011 22233467
Q ss_pred eecCceEEEEEcch
Q 008146 394 VMGEGAGVLLLEEL 407 (576)
Q Consensus 394 v~gEGAaalvL~~~ 407 (576)
++||||+|+||++.
T Consensus 163 lfGDGAaA~ll~~~ 176 (181)
T d1mzja1 163 LFGDGAGAAVVGPS 176 (181)
T ss_dssp TBCEEEEEEEEEEE
T ss_pred EeeeeeEEEEEEeC
Confidence 89999999999864
|
| >d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.01 E-value=4.6e-10 Score=95.31 Aligned_cols=121 Identities=17% Similarity=0.277 Sum_probs=91.1
Q ss_pred CCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCC-CCc
Q 008146 414 GAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGL 492 (576)
Q Consensus 414 g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~-~~~ 492 (576)
|.+|+++|.+++...- .|.-.+.+...+++++|+++|++.+|||+||.|-.+.. -..+..+.++-+ .++
T Consensus 2 gl~plAri~~~a~~g~-----~P~~m~~gPv~Ai~klL~r~gl~~~Did~~EinEAFA~-----q~l~~~~~l~id~~kv 71 (124)
T d1afwa2 2 NLPVLGRYIDFQTVGV-----PPEIMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAA-----QALYCIHKLGIDLNKV 71 (124)
T ss_dssp TCCCCEEEEEEEEEEC-----CGGGGGGHHHHHHHHHHHHHTCCGGGCSEEEECCSBHH-----HHHHHHHHHTCCGGGB
T ss_pred CCcEEEEEEEEEEEec-----CHHHhhhChHHHHHHHHHHcCCCcccCcEEEeccchhH-----HHHHHHHHcCCChhhc
Confidence 6789999999987632 24445678899999999999999999999999876553 233445556543 346
Q ss_pred ccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEE
Q 008146 493 RVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIF 572 (576)
Q Consensus 493 ~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil 572 (576)
+++...-.+|||.||||...++.++.+|+++ ++++.+.-.-||.-..+|+
T Consensus 72 N~~GGaiAlGHP~GaSGarlv~~l~~~L~~~------------------------------~~glas~C~ggG~G~a~~i 121 (124)
T d1afwa2 72 NPRGGAIALGHPLGCTGARQVATILRELKKD------------------------------QIGVVSMCIGTGMGAAAIF 121 (124)
T ss_dssp STTCCHHHHCBCTTTHHHHHHHHHHHHSCTT------------------------------CEEEEEEEETTTEEEEEEE
T ss_pred cccCccceecCCcCCchHHHHHHHHHHhccC------------------------------CEEEEEEcccCCcEEEEEE
Confidence 7777777789999999999999998887531 2455555566777777777
Q ss_pred ee
Q 008146 573 SP 574 (576)
Q Consensus 573 ~~ 574 (576)
++
T Consensus 122 er 123 (124)
T d1afwa2 122 IK 123 (124)
T ss_dssp EE
T ss_pred Ee
Confidence 75
|
| >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=98.93 E-value=1.5e-09 Score=91.95 Aligned_cols=121 Identities=20% Similarity=0.238 Sum_probs=93.8
Q ss_pred eeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCC-CCccc
Q 008146 416 KIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRV 494 (576)
Q Consensus 416 ~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~-~~~~v 494 (576)
+|+++|.++..... .|.-.+.+...+++++|+++|++.+|||+||.|-.+.. ...+..+.++-+ ..+++
T Consensus 2 ~Plari~~~a~~g~-----dP~~mg~~Pv~A~~~lL~r~gl~~~Did~~EinEAFA~-----q~la~~~~l~id~~kvN~ 71 (124)
T d1m3ka2 2 QPLGRIVSWATVGV-----DPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAA-----QACAVNKDLGWDPSIVNV 71 (124)
T ss_dssp CCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGGGCSEEEECCSBHH-----HHHHHHHHHCCCGGGBST
T ss_pred CcEEEEEEEEEEec-----ChHHhccchHHHHHHHHHHcCCChhcccHHHhcccchh-----heeeehHhhCCChhhcCC
Confidence 57899999987632 23444667789999999999999999999999866542 334455666643 35777
Q ss_pred ccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 495 NSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 495 ~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
+...-.+|||.||||...++.++..|++. ..++++.+.-.-||.-..+++|+
T Consensus 72 ~GGaiAlGHP~GaSGarl~~tl~~~L~~~----------------------------~~~~Glas~C~gGG~g~A~liE~ 123 (124)
T d1m3ka2 72 NGGAIAIGHPIGASGARILNTLLFEMKRR----------------------------GARKGLATLCIGGGMGVAMCIES 123 (124)
T ss_dssp TCCHHHHCCCTTTHHHHHHHHHHHHHHHH----------------------------TCSEEEEEEEETTTEEEEEEEEC
T ss_pred CCCccccccCcCccchhHHHHHHHHHHhc----------------------------CCCEEEEEecccccceeEEEEEe
Confidence 77777899999999999999999999861 23567777777788888999885
|
| >d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.93 E-value=2.3e-09 Score=104.51 Aligned_cols=91 Identities=14% Similarity=0.161 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHhC----CCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHH
Q 008146 236 MLYLLTAGKKALADG----GITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLA 311 (576)
Q Consensus 236 ~rl~l~aa~eAL~dA----Gi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia 311 (576)
..|+..+..++|+++ |+++++|| .|++|+.... .....++.+++
T Consensus 36 ~~L~~~~i~~~l~r~~~~~~idp~~Id-------~vi~G~v~~~-------------------------g~~~~~aR~~a 83 (269)
T d1afwa1 36 DYLLYNFLNEFIGRFPEPLRADLNLIE-------EVACGNVLNV-------------------------GAGATEHRAAC 83 (269)
T ss_dssp HHHHHHHHHHHHHTSCHHHHTCGGGCC-------CEEEECSSSB-------------------------GGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCccccCChhhcC-------EEEecccccc-------------------------ccccccchhhh
Confidence 456777888888754 68888776 5899976421 11234567777
Q ss_pred HHhCC--CCccccccCCCchHHHHHHHHHHHHHcCCCCEEEEecccccc
Q 008146 312 MDLGW--MGPNYSISTACATSNFCILNAANHIIRGEANVMLCGGSDAAV 358 (576)
Q Consensus 312 ~~lgl--~Gp~~tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~ 358 (576)
..-|+ .-|.++|+..|+||+.||..|++.|++|+.|++|+||+|.|.
T Consensus 84 l~aglp~~vpa~tVnr~CaSg~~Ai~~Aa~~I~~G~~divlagG~EsmS 132 (269)
T d1afwa1 84 LASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMT 132 (269)
T ss_dssp HHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHH
T ss_pred hhccccccccchhccccchHHHHHHHHHHHHHhhccccceeeeeccccc
Confidence 77887 459999999999999999999999999999999999999875
|
| >d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=98.91 E-value=2.4e-09 Score=90.86 Aligned_cols=121 Identities=22% Similarity=0.305 Sum_probs=90.8
Q ss_pred eeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcC---CCCc
Q 008146 416 KIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQ---NRGL 492 (576)
Q Consensus 416 ~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~---~~~~ 492 (576)
+|+++|.+++.... .|...+.+...+++++|+++|++.+|||+||.|-.+.. ...+..+.++- ...+
T Consensus 1 KPlA~i~~~~~~g~-----~P~~~~~~P~~A~~~~L~r~gl~~~Did~~EinEAFAa-----q~l~~~~~~~l~~d~~kv 70 (125)
T d1ulqa2 1 RPLARVRAIAVAGV-----PPRIMGIGPVPATRKALERAGLSFSDLGLIELNEAFAA-----QALAVLREWSLSMEDQRL 70 (125)
T ss_dssp CCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHTTCCGGGCSEEEECCSBHH-----HHHHHHHHHTCCTTCTTB
T ss_pred CCeEEEEEEEEEec-----CHHHHhhccHHHHHhHhhccCcCccccchheeccccch-----hHHHHHHHhhccCchhhc
Confidence 47899999987632 23334556789999999999999999999998865542 22222334332 2357
Q ss_pred ccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEE
Q 008146 493 RVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIF 572 (576)
Q Consensus 493 ~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil 572 (576)
+++...-.+|||.||||...++.++.+|++. ..++++.+.-.-||.-..+++
T Consensus 71 N~~GGaIAlGHP~GASGari~~tl~~~L~~~----------------------------~~~~G~as~C~gGG~g~A~~i 122 (125)
T d1ulqa2 71 NPNGGAIALGHPLGASGARILTTLVHEMRRR----------------------------KVQFGLATMCIGVGQGIAVVV 122 (125)
T ss_dssp STTCCHHHHCCCHHHHHHHHHHHHHHHHHHT----------------------------TCSEEEEEEEETTTEEEEEEE
T ss_pred CCCCCcccccCCccccchhHHHHHHHHHHhc----------------------------CCCEEEEEecccccceeEEEE
Confidence 7777777889999999999999999999861 235667777778888999999
Q ss_pred ee
Q 008146 573 SP 574 (576)
Q Consensus 573 ~~ 574 (576)
|+
T Consensus 123 E~ 124 (125)
T d1ulqa2 123 EG 124 (125)
T ss_dssp EE
T ss_pred Ee
Confidence 86
|
| >d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=98.87 E-value=2.1e-09 Score=91.70 Aligned_cols=123 Identities=17% Similarity=0.255 Sum_probs=91.2
Q ss_pred CCeeeEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCC----
Q 008146 414 GAKIYAEFRGGSFTSDAYHMTEPHPDGVGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN---- 489 (576)
Q Consensus 414 g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~---- 489 (576)
|.+|+++|++++.... .|.-.+.+...+++++|+++|++.+|||+||.|-.+.. ...+..+.++..
T Consensus 1 Gl~pla~i~~~~~~g~-----dP~~mg~~p~~A~~klL~ragl~~~did~~EinEAFA~-----q~l~~~~~~~~~~~~~ 70 (128)
T d1wdkc2 1 GLEPLAVIRSMAVAGV-----DPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFAA-----QALPVLKDLKVLDKMN 70 (128)
T ss_dssp TCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGGGCCEEEECCSBHH-----HHHHHHHHTTCGGGHH
T ss_pred CCCEEEEEEEEEEEec-----CHHHhccCcHHHHHHHhhhcCccccccceEEeecccch-----hhhhhhhhcccccCCc
Confidence 5688999999987632 23334567789999999999999999999998865431 222222222211
Q ss_pred CCcccccccccccccccchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeE
Q 008146 490 RGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSS 569 (576)
Q Consensus 490 ~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~ 569 (576)
++++++...-.+|||.||||...++.++.+|++. ..++++++.-.-||.-..
T Consensus 71 ekvN~~GGaiAlGHP~GASGaRlv~~l~~~L~~~----------------------------~~~~Glas~C~gGG~g~A 122 (128)
T d1wdkc2 71 EKVNLHGGAIALGHPFGCSGARISGTLLNVMKQN----------------------------GGTFGLSTMCIGLGQGIA 122 (128)
T ss_dssp HHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT----------------------------TCSEEEEEEEETTTEEEE
T ss_pred ceecCCCCcccccccccccchhHHHHHHHHHHhc----------------------------CCCEEEEEecccccceeE
Confidence 2366777777789999999999999999999862 235667777778888899
Q ss_pred EEEee
Q 008146 570 IIFSP 574 (576)
Q Consensus 570 vil~~ 574 (576)
++||+
T Consensus 123 ~~iEr 127 (128)
T d1wdkc2 123 TVFER 127 (128)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 99885
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.86 E-value=3.2e-09 Score=99.15 Aligned_cols=117 Identities=15% Similarity=0.150 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
...|+.+|+++||+++|+++++|+ .|+++++.+ ...+..+..+...+
T Consensus 75 a~~la~~Aa~~aL~~ag~~~~dId-------~lI~~s~t~--------------------------~~~P~~aa~v~~~l 121 (200)
T d1u0ma1 75 AKSRVPAVIQRALDDAELLATDID-------VIIYVSCTG--------------------------FMMPSLTAWLINEM 121 (200)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCS-------EEEEECSSS--------------------------CCSSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCChhhhh-------eEEEeccCC--------------------------CCcchhHHHHHHHH
Confidence 356999999999999999998776 455555421 11234677889999
Q ss_pred CCCC--ccccc-cCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCC-
Q 008146 315 GWMG--PNYSI-STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINR- 390 (576)
Q Consensus 315 gl~G--p~~tv-~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~- 390 (576)
|+.. +.+.+ ..+|++++.+|+.|..+|++|..+.+||+++|.+..-. +|-|.+.
T Consensus 122 g~~~~~~~~~i~~~gC~g~~~al~~A~~~l~~~~~~~vLvv~~e~~S~~~----------------------~~~d~~~~ 179 (200)
T d1u0ma1 122 GFDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFCSLCY----------------------QPTDLGVG 179 (200)
T ss_dssp TCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEEGGGGC----------------------CTTCCSHH
T ss_pred hcCCCeeEeccccchhhHHHHHHHHHHHHHHhCCCCEEEEEEEecccccc----------------------CCCCCChh
Confidence 9875 45555 57999999999999999999999999999999742110 1111111
Q ss_pred ---CcceecCceEEEEEcc
Q 008146 391 ---DGFVMGEGAGVLLLEE 406 (576)
Q Consensus 391 ---~G~v~gEGAaalvL~~ 406 (576)
...++||||+|+||..
T Consensus 180 ~~~~~~lFgDGAaA~ll~~ 198 (200)
T d1u0ma1 180 SLLCNGLFGDGIAAAVVRG 198 (200)
T ss_dssp HHHHHHHBCEEEEEEEEET
T ss_pred hhhcccccccccEEEEEec
Confidence 1346899999999975
|
| >d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=98.68 E-value=5.9e-08 Score=92.55 Aligned_cols=90 Identities=14% Similarity=0.106 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHh
Q 008146 235 FMLYLLTAGKKALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDL 314 (576)
Q Consensus 235 ~~rl~l~aa~eAL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~l 314 (576)
...|+.+|+.+||+++|+++++|+ .|+++++.+. ..++ ....+...+
T Consensus 102 ~~~la~~Aa~~aL~~a~~~~~dId-------~lI~~t~t~~-------------------------~~p~-~~a~~~~~l 148 (235)
T d1bi5a1 102 VPRLGKEAAVKAIKEWGQPKSKIT-------HLIVCTTSGV-------------------------DMPG-ADYQLTKLL 148 (235)
T ss_dssp HHHHHHHHHHHHHHHHCSCGGGCC-------EEEEEESSCC-------------------------CSSC-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCChhHCc-------EEEEecccCC-------------------------ccCc-cHHHHHHHH
Confidence 457999999999999999998766 5777665421 1222 345566667
Q ss_pred CCCCc--cc-cccCCCchHHHHHHHHHHHHHcCCCCEEEEeccccc
Q 008146 315 GWMGP--NY-SISTACATSNFCILNAANHIIRGEANVMLCGGSDAA 357 (576)
Q Consensus 315 gl~Gp--~~-tv~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~ 357 (576)
++... .+ .+..+|++++.+|..|.++|++|..+.|||+++|.+
T Consensus 149 ~~~~~~~~~~~~~~~C~g~~~al~~A~~~i~~~~~~~vLvV~~E~~ 194 (235)
T d1bi5a1 149 GLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVT 194 (235)
T ss_dssp TCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEECG
T ss_pred hcCCCceEEeeecCccchHHHHHHHHHHHHHcCCCCeEEEEEeeec
Confidence 76543 23 457899999999999999999999999999999973
|
| >d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Probab=98.60 E-value=2.2e-08 Score=90.43 Aligned_cols=160 Identities=11% Similarity=0.103 Sum_probs=101.8
Q ss_pred EEEEecceecCCC-CCHHHHHHHHHcCCCcceeccCCCCCCCCccccccccCCCCCCCCChhhhhcCCHHHHHHHHHHHH
Q 008146 167 VVVTGMGLVSPLG-HEPDVFYNNLLEGVSGISEIETFDCTSFPTKIAAEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKK 245 (576)
Q Consensus 167 IaItGmg~~~P~g-~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~v~~fd~~~~i~~~~a~~mdp~~rl~l~aa~e 245 (576)
|-|.|+|..+|.- .+.+++-+.. |.+. ..+ .+..+...+ .+..+.| ....|+..|+++
T Consensus 2 VgI~~~~~ylP~~~v~~~e~~~~~--g~~~-~~i--~~~~Gi~~r-----------~~~~~~E-----~~~~ma~~Aa~~ 60 (166)
T d1xpma1 2 IGIDKINFYVPKYYVDMAKLAEAR--QVDP-NKF--LIGIGQTEM-----------AVSPVNQ-----DIVSMGANAAKD 60 (166)
T ss_dssp EEEEEEEEECCSEEEEHHHHHHHT--TSCH-HHH--HTTTCCSEE-----------EECCTTC-----CHHHHHHHHHHT
T ss_pred eeEeEEEEECCCeEEcHHHHHHHh--CCCH-HHH--HHhcCcEEE-----------EeCCCcc-----CHHHHHHHHHHh
Confidence 7799999999998 6777765432 2221 000 000000000 0111222 134588888888
Q ss_pred HHHhCCCChhhhhcccCCeeEEEEcccCCchhHHHHHHHHHHhhhccCCCccccccccchhHHHHHHHhCCCC--ccccc
Q 008146 246 ALADGGITEDVMNELDKSKCGVLIGSGLGGMKVFYDAIEALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMG--PNYSI 323 (576)
Q Consensus 246 AL~dAGi~~~~i~~~~~~r~gV~vG~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G--p~~tv 323 (576)
+|++.+ +++++ -+++++.. +....+..+..+...+|+.. .++.+
T Consensus 61 al~~~~--~~~id-------~li~~t~~-------------------------~~~~~p~~a~~v~~~lg~~~~~~~~dv 106 (166)
T d1xpma1 61 IITDED--KKKIG-------MVIVATES-------------------------AVDAAKAAAVQIHNLLGIQPFARCFEM 106 (166)
T ss_dssp TCCHHH--HHHEE-------EEEEECSS-------------------------CSBSSSCHHHHHHHHTTCCSSCEEEEE
T ss_pred hhcccc--CCCCC-------eEEEeccc-------------------------cccccchhHHHHHHhhccccceEEeee
Confidence 876543 43332 24444432 22234556888999999864 67899
Q ss_pred cCCCchHHHHHHHHHHHHHcCCCCEEEEeccccccchhhhHHHHHhhhhhccCCCCCCCCCCCccCCCcceecCceEEEE
Q 008146 324 STACATSNFCILNAANHIIRGEANVMLCGGSDAAVIPIGLGGFVACRALSQRNNDPTKASRPWDINRDGFVMGEGAGVLL 403 (576)
Q Consensus 324 ~taCaSgl~AL~~A~~~I~~G~~d~aLvgGvd~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGAaalv 403 (576)
..+|++++.||..|..+|++|..+.+||++.|..... ++ ..+-+.+||||+|+|
T Consensus 107 ~~~C~g~~~al~~A~~~i~~~~~~~alvV~sd~~~~~-------------------------~~-~~~~~~fGDGA~A~l 160 (166)
T d1xpma1 107 KEACYAATPAIQLAKDYLATRPNEKVLVIATDTARYG-------------------------LN-SGGEPTQGAGAVAMV 160 (166)
T ss_dssp ESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEEECCC-------------------------TT-CSSGGGCEEEEEEEE
T ss_pred cccHHHHHHHHHHHhhHHhcCCCCeEEEEEEceEecc-------------------------CC-CCCCccCCCeeEEEE
Confidence 9999999999999999999999999999999862110 01 112356899999999
Q ss_pred Ecch
Q 008146 404 LEEL 407 (576)
Q Consensus 404 L~~~ 407 (576)
|++.
T Consensus 161 l~~~ 164 (166)
T d1xpma1 161 IAHN 164 (166)
T ss_dssp EEES
T ss_pred EecC
Confidence 9863
|
| >d1or5a_ a.28.1.1 (A:) Frenolicin polyketide synthase acyl carrier protein, Fren ACP {Streptomyces roseofulvus [TaxId: 33902]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Frenolicin polyketide synthase acyl carrier protein, Fren ACP species: Streptomyces roseofulvus [TaxId: 33902]
Probab=98.26 E-value=5.2e-08 Score=76.99 Aligned_cols=49 Identities=8% Similarity=-0.069 Sum_probs=46.3
Q ss_pred chhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 78 SHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 78 ~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
+..|.+| +|||.++||+++|++.+|++ +|.+.+|+|||+.+++.+...+
T Consensus 29 d~~f~dlG~DSl~~~el~~~le~~~g~~-----l~~~~~~~~~Ti~~l~~~v~~~ 78 (82)
T d1or5a_ 29 DTPFVDLGYDSLALLETAAVLQQRYGIA-----LTDETVGRLGTPRELLDEVNTT 78 (82)
T ss_dssp SSCHHHHSCCHHHHHHHHHHHHTTSCCC-----CSHHHHHHCCCSHHHHHHHTTC
T ss_pred CcCHHHcCCChHhHHHHHHHHHHHHhCc-----CCHHHHHcCCCHHHHHHHHHhc
Confidence 5789999 99999999999999999999 9999999999999999987765
|
| >d2af8a_ a.28.1.1 (A:) Actinorhodin polyketide synthase acyl carrier protein, ACT ACP {Streptomyces coelicolor, A3(2) [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Actinorhodin polyketide synthase acyl carrier protein, ACT ACP species: Streptomyces coelicolor, A3(2) [TaxId: 1902]
Probab=98.23 E-value=1.5e-07 Score=75.01 Aligned_cols=50 Identities=8% Similarity=-0.105 Sum_probs=47.8
Q ss_pred CchhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 77 SSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 77 ~~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
.+..|.+| +|||.++|++++|.+.+|++ +|.+.+|+|||+.+++.+...+
T Consensus 31 ~d~~f~dlG~DSl~~~~l~~~l~~~~g~~-----l~~~~~~~~~Tv~~l~~~i~~~ 81 (86)
T d2af8a_ 31 LDLRFEDIGYDSLALMETAARLESRYGVS-----IPDDVAGRVDTPRELLDLINGA 81 (86)
T ss_dssp CSSSHHHHTCSSHHHHHHHHHHHHHHTCC-----CCCSTTTTCCCHHHHHHHHHHH
T ss_pred cCCCHHHcCCCHHHHHHHHHHHHHHHccC-----cCHHHHHcCCCHHHHHHHHHHH
Confidence 46789999 99999999999999999999 9999999999999999999887
|
| >d1nq4a_ a.28.1.1 (A:) Oxytetracycline polyketide synthase acyl carrier {Streptomyces rimosus [TaxId: 1927]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Oxytetracycline polyketide synthase acyl carrier species: Streptomyces rimosus [TaxId: 1927]
Probab=98.22 E-value=1.3e-07 Score=76.88 Aligned_cols=49 Identities=8% Similarity=0.013 Sum_probs=47.3
Q ss_pred chhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 78 SHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 78 ~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
+..|.+| +|||.++||.++|...+|++ +|.+.+|+|||+..|+.++..+
T Consensus 31 d~~f~dlG~DSl~~~el~~~le~~~gv~-----l~~~~~~~~~Ti~~l~~~l~~~ 80 (95)
T d1nq4a_ 31 DVAFDALGYDSLALLNTVGRIERDYGVQ-----LGDDAVEKATTPRALIEMTNAS 80 (95)
T ss_dssp SSCHHHHTCCSHHHHHHHHHHHHHTCCC-----SCTTHHHHCCSHHHHHHHHHHH
T ss_pred CCCHHHcCCcHHHHHHHHHHHHHHhcCC-----CCHHHHhcCCCHHHHHHHHHHh
Confidence 6789999 99999999999999999999 9999999999999999999887
|
| >d2gdwa1 a.28.1.2 (A:8-83) Peptidyl carrier protein (PCP), thioester domain {Bacillus brevis [TaxId: 1393]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Peptidyl carrier domain domain: Peptidyl carrier protein (PCP), thioester domain species: Bacillus brevis [TaxId: 1393]
Probab=97.61 E-value=4.3e-06 Score=64.61 Aligned_cols=47 Identities=6% Similarity=-0.082 Sum_probs=43.9
Q ss_pred CchhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHH
Q 008146 77 SSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRR 128 (576)
Q Consensus 77 ~~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~ 128 (576)
....|-++ .|||+++++.++|++.+|+. ++.+.+|+|||+..+++++
T Consensus 27 ~~~~f~~lG~dSl~a~~l~~~i~~~~~~~-----l~~~~l~~~pTi~~LA~~i 74 (76)
T d2gdwa1 27 ILDNFFQIGGHSLKAMAVAAQVHREYQVE-----LPLKVLFAQPTIKALAQYV 74 (76)
T ss_dssp TTTTSSTTTCTTHHHHHHHHHHHHTTSSC-----CTTHHHHHSCSHHHHHHHH
T ss_pred CCCCHHHcCCChHHHHHHHHHHHHHHCCC-----CCHHHHHcCCCHHHHHHHh
Confidence 35788899 99999999999999999999 9999999999999999886
|
| >d1klpa_ a.28.1.1 (A:) Acyl carrier protein {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Acyl carrier protein species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.57 E-value=2.2e-05 Score=65.60 Aligned_cols=49 Identities=12% Similarity=-0.041 Sum_probs=45.3
Q ss_pred chhhh-Hh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 78 SHSIQ-SL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 78 ~~~~~-~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
...|. +| +|||..+||.++|...+|+. +|.+.+|+|||+..++.++...
T Consensus 30 ~~~~~~dlG~DSl~~~~l~~~le~~f~i~-----i~~~~~~~~~Tv~~l~~~l~~~ 80 (115)
T d1klpa_ 30 EKSFVDDLDIDSLSMVEIAVQTEDKYGVK-----IPDEDLAGLRTVGDVVAYIQKL 80 (115)
T ss_dssp TCCTTTTTCSHHHHHHHHHHHHHHHTCCC-----CCHHHHTTCCSHHHHHHHHHHH
T ss_pred ccchhhhcccchhHHHHHHHHHHHHHCCC-----CCHHHHHhCccHHHHHHHHHHH
Confidence 45664 79 99999999999999999999 9999999999999999999876
|
| >d2pnga1 a.28.1.1 (A:1-76) Type I fatty acid synthase ACP domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Type I fatty acid synthase ACP domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.37 E-value=1.7e-05 Score=61.11 Aligned_cols=44 Identities=9% Similarity=-0.062 Sum_probs=39.3
Q ss_pred CchhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHH
Q 008146 77 SSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLN 126 (576)
Q Consensus 77 ~~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~ 126 (576)
....|.+| +|||+++||+|+|...+|++ ||++.+| +||...|++
T Consensus 27 ~~~~f~~lG~DSl~a~el~~~i~~~~g~~-----l~~~~l~-~~Ti~~L~e 71 (76)
T d2pnga1 27 LDSSLADLGLDSLMGVEVRQILEREHDLV-----LPIREVR-QLTLRKLQE 71 (76)
T ss_dssp SSSCHHHHTCSSHHHHHHHHHHHHHTCCC-----CCHHHHT-TCCSHHHHH
T ss_pred CCCCHHHhCCcHHHHHHHHHHHHHHhCCC-----CCHHHHH-HhhHHHHHH
Confidence 46899999 99999999999999999999 9999987 588876654
|
| >d1vkua_ a.28.1.1 (A:) Acyl carrier protein {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Acyl carrier protein species: Thermotoga maritima [TaxId: 2336]
Probab=97.23 E-value=3.1e-05 Score=60.90 Aligned_cols=50 Identities=4% Similarity=-0.051 Sum_probs=47.1
Q ss_pred CchhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 77 SSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 77 ~~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
....|.+| +|||..+|+.+++...+|++ +|.+.+|++||...++.++..+
T Consensus 30 ~~~~~~dlG~DSl~~v~l~~~ie~~f~i~-----i~~~~~~~~~Tv~~l~~~i~~~ 80 (85)
T d1vkua_ 30 EENTFKELGFDSIDVIDLVMFFEDEFALR-----IEDEEISKIRKVKDLIDIVIKK 80 (85)
T ss_dssp TTSBTTTTTCCHHHHHHHHHHHHHHHTCC-----CCHHHHTTCCBHHHHHHHHHHH
T ss_pred CCCCHHHhcCcchHHHHHHHHHHHHccCC-----CCHHHHHHcCCHHHHHHHHHHH
Confidence 36789999 99999999999999999999 9999999999999999998877
|
| >d1f80d_ a.28.1.1 (D:) Acyl carrier protein {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Acyl carrier protein species: Bacillus subtilis [TaxId: 1423]
Probab=96.97 E-value=5.2e-05 Score=57.96 Aligned_cols=46 Identities=11% Similarity=-0.123 Sum_probs=41.7
Q ss_pred chhhh-Hh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHH
Q 008146 78 SHSIQ-SL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRR 128 (576)
Q Consensus 78 ~~~~~-~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~ 128 (576)
.+.|. +| +|||..+||.++|...+|++ +|.+.+|++||+..+++++
T Consensus 26 ~~~~~~DlG~DSl~~vel~~~le~~f~i~-----i~~~~~~~~~Tv~~l~~~i 73 (74)
T d1f80d_ 26 EASFKEDLGADXLDVVELVMELEDEFDME-----ISDEDAEKIATVGDAVNYI 73 (74)
T ss_dssp TCBHHHHSCCCHHHHHHHHHHHHHHTTCC-----CCHHHHHHCCBHHHHHHHC
T ss_pred CccHHHhcCccHhHHHHHHHHHHHHhCCC-----CCHHHHhcCCCHHHHHHHH
Confidence 46674 79 99999999999999999999 9999999999999888763
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.91 E-value=0.0028 Score=54.76 Aligned_cols=98 Identities=14% Similarity=0.146 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCCCcccccccccccccccchhHHHHHHHHHHHHc
Q 008146 443 VILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRT 522 (576)
Q Consensus 443 ~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~ 522 (576)
+.++|+++|+++|++++|||++..|-.+.. -.+++.+.++-..+-.+...-..+||+.+|+=.+.|. .+++.
T Consensus 50 v~~~i~~~L~~~gl~~~dId~~i~Hqa~~~-----i~~~v~~~lgl~~ek~~~~~~~~~GNt~sasip~~L~---~a~~~ 121 (148)
T d1u6ea2 50 MGDVGRRAMDAAGVRPDQIDVFVPHQANSR-----INELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMA---ELLTT 121 (148)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEECCSCHH-----HHHHHHHHHTCCTTCEECCTHHHHCBCGGGHHHHHHH---HHHHH
T ss_pred HHHHHHHHHHHcCCCcccccEEEeccccHH-----HHHHHHHhcCCCchhhhhhhHHhhCCCccchHHHHHH---HHHHc
Confidence 457899999999999999999999966543 4566667776442212223344679998887555544 35555
Q ss_pred CCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEe
Q 008146 523 GWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573 (576)
Q Consensus 523 g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~ 573 (576)
+.+. +-...+..+||.|=+-+++|++
T Consensus 122 g~i~-------------------------~Gd~vll~gfG~G~s~~a~llr 147 (148)
T d1u6ea2 122 GAAK-------------------------PGDLALLIGYGAGLSYAAQVVR 147 (148)
T ss_dssp TSSC-------------------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred CCCC-------------------------CCCEEEEEEEchhhhheEEEEe
Confidence 5431 1244566789988777788775
|
| >d2jq4a1 a.28.1.1 (A:1-83) Hypothetical protein Atu2571 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Hypothetical protein Atu2571 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.81 E-value=0.00017 Score=56.23 Aligned_cols=50 Identities=4% Similarity=-0.170 Sum_probs=45.8
Q ss_pred CchhhhHh-hhcccccccchhhhhhhcCccccCCCCcccccC--CCChhHHHHHHHHH
Q 008146 77 SSHSIQSL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFG--SNNSTATLNRRQRR 131 (576)
Q Consensus 77 ~~~~~~~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd--~pt~~al~~~~~~~ 131 (576)
.+..|.+| +|||.++||.++|...+|++ +|.+.+|. +||..+++.+....
T Consensus 24 ~~~~f~dlG~DSl~~~~l~~~le~~f~v~-----i~~~~l~~~~~~Ti~~la~~i~~~ 76 (83)
T d2jq4a1 24 DEADLYAAGLSSFASVQLMLGIEEAFDIE-----FPDNLLNRKSFASIKAIEDTVKLI 76 (83)
T ss_dssp TTSCGGGGTCCHHHHHHHHHHHHHHHSCC-----CCHHHHSSGGGGCHHHHHHHHHHH
T ss_pred CCCCHHHHhCccHHHHHHHHHHHHHHCCC-----CCHHHHHHHHHhhHHHHHHHHHHH
Confidence 46789999 99999999999999999999 99999995 59999999988776
|
| >d1dv5a_ a.28.1.3 (A:) apo-D-alanyl carrier protein {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: apo-D-alanyl carrier protein domain: apo-D-alanyl carrier protein species: Lactobacillus casei [TaxId: 1582]
Probab=96.71 E-value=0.00018 Score=55.66 Aligned_cols=48 Identities=10% Similarity=0.009 Sum_probs=42.6
Q ss_pred chhhhHh--hhcccccccchhhhhhhcCccccCCCCccccc--CCCChhHHHHHHHH
Q 008146 78 SHSIQSL--MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFF--GSNNSTATLNRRQR 130 (576)
Q Consensus 78 ~~~~~~~--~dsl~avel~n~l~~~~g~~~~~~~l~~t~~F--d~pt~~al~~~~~~ 130 (576)
+..|.++ +|||.+|||.+++...+|++ +|.+.+| +++|+.+++.++..
T Consensus 27 d~~l~e~gglDSl~~vel~~~ie~~fgi~-----i~~~~l~~~~~~Tv~~l~~~v~~ 78 (80)
T d1dv5a_ 27 DLNLFETGLLDSMGTVQLLLELQSQFGVD-----APVSEFDRKEWDTPNKIIAKVEQ 78 (80)
T ss_dssp SCCSSTTSSCCSHHHHHHHHHHTTTSCCC-----CCCSSCCTTTTTSHHHHHHHHHT
T ss_pred CccccccCCCCHHHHHHHHHHHHHHHCCC-----CCHHHhhHHhCCCHHHHHHHHHH
Confidence 4556664 79999999999999999999 9999999 89999999998764
|
| >d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=95.78 E-value=0.028 Score=47.85 Aligned_cols=97 Identities=20% Similarity=0.238 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCCCcccccccccccccccchhHHHHHHHHHHHHc
Q 008146 443 VILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRT 522 (576)
Q Consensus 443 ~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~ 522 (576)
+.++++++|+++|++++|||++..|-.+... .+.+.+.++-... .+...-..+||+.+|+=.+.|- ..++.
T Consensus 46 ~~~~i~~~L~~~g~~~~dId~~i~Hq~~~~~-----~~~~~~~l~l~~~-k~~~~~~~~GN~~sasip~~L~---~~~~~ 116 (143)
T d1hnja2 46 LAHIVDETLAANNLDRSQLDWLVPHQANLRI-----ISATAKKLGMSMD-NVVVTLDRHGNTSAASVPCALD---EAVRD 116 (143)
T ss_dssp HHHHHHHHHHHTTCCGGGCCEEEECCSCHHH-----HHHHHHHTTCCGG-GBCCCHHHHCBCGGGHHHHHHH---HHHHT
T ss_pred hhHHHHHHHHHhhhcccccceEEeccCchHH-----HHHHHHhCccchh-hhhhhhhhhcccccchHHHHHH---HHHHh
Confidence 4578999999999999999999999766543 4445555653321 1222334679998887554433 34555
Q ss_pred CCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEe
Q 008146 523 GWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573 (576)
Q Consensus 523 g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~ 573 (576)
+.+. +-...+..+||.|=+.++++++
T Consensus 117 ~~~~-------------------------~Gd~vll~g~G~G~s~g~~llr 142 (143)
T d1hnja2 117 GRIK-------------------------PGQLVLLEAFGGGFTWGSALVR 142 (143)
T ss_dssp TCSC-------------------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred CCCC-------------------------CCCEEEEEEEehhhhhEEEEEE
Confidence 4331 1244566789988777777764
|
| >d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=95.47 E-value=0.045 Score=47.03 Aligned_cols=99 Identities=19% Similarity=0.228 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCCCcccccccccccccccchhHHHHHHHHHHHH
Q 008146 442 GVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIR 521 (576)
Q Consensus 442 ~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~ 521 (576)
.+.++++++|+++|++++|||++..|-.+. .-.+.+.+.++-..+-.+...-..+||+.+|+=.+. ....++
T Consensus 49 ~vp~~i~~~L~~~gl~~~dId~~i~Hq~~~-----~~~~~v~~~lgi~~ek~~~~~~~~~GNt~Sasip~~---L~~~~~ 120 (153)
T d1mzja2 49 DVVPAAREALEVAGLTVGDLVAFVPHQANL-----RIIDVLVDRLGVPEHVVVSRDAEDTGNTSSASVALA---LDRLVR 120 (153)
T ss_dssp HHHHHHHHHHHTTTCCGGGCSEEEECCSCH-----HHHHHHHHHHTCCTTSEECCTHHHHCBCTTHHHHHH---HHHHHH
T ss_pred HHHHHHHHHHHHhCCCcccCCEEEEcCCcH-----HHHHHHHHHhCCCchhcchhhhhhcCCcccchHHHH---HHHHHH
Confidence 345789999999999999999999996664 345566666664322222223345799877753222 233455
Q ss_pred cCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEe
Q 008146 522 TGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573 (576)
Q Consensus 522 ~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~ 573 (576)
.+.+. +-...+..+||.|=+.+..+|.
T Consensus 121 ~~~~~-------------------------~Gd~ill~~fG~G~s~~~~~l~ 147 (153)
T d1mzja2 121 SGAVP-------------------------GGGPALMIGFGAGLSYAGQALL 147 (153)
T ss_dssp HTSSC-------------------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred cCCCC-------------------------CCCEEEEEEEchhhhhhEEEEE
Confidence 54431 1234566688877565566654
|
| >d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=95.24 E-value=0.03 Score=47.98 Aligned_cols=97 Identities=20% Similarity=0.211 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCCCcccccccccccccccchhHHHHHHHHHHHHc
Q 008146 443 VILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIRT 522 (576)
Q Consensus 443 ~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~~ 522 (576)
+..+|+++|+++|++++|||++..|-.+.. =.+.+.+.++-...- +...-..+||+.+|+=.+.| ...++.
T Consensus 49 vp~~i~~~L~~~g~~~~dId~~i~Hqa~~~-----~~~~i~~~lgi~~~k-~~~~~~~~Gn~~sasip~~L---~~~~~~ 119 (149)
T d1ub7a2 49 MNTATLEAIEKAGLTPEDIRLFVPHQANLR-----IIDAARERLGLPWER-VAVNVDRYGNTSTASIPLAL---KEAVDA 119 (149)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECCSCHH-----HHHHHHHTTTCCGGG-BCCCHHHHCBCGGGHHHHHH---HHHHHH
T ss_pred HHHHHHHHHHhhccccccccEEEeeccchH-----HHHHHHhhccchhhH-HHHHHHHhcCCcchhHHHHH---HHHHHc
Confidence 347899999999999999999999965553 334444444432211 11222457999888755443 344555
Q ss_pred CCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEe
Q 008146 523 GWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFS 573 (576)
Q Consensus 523 g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~ 573 (576)
+.+. +-...+..+||.|-+.+++|++
T Consensus 120 ~~~~-------------------------~Gd~vll~g~G~G~s~ga~llr 145 (149)
T d1ub7a2 120 GRIR-------------------------EGDHVLLVSFGAGLTWAAAVLT 145 (149)
T ss_dssp TSSC-------------------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred CCCC-------------------------CCCEEEEEEEchHhhhEEEEEE
Confidence 4431 2245667799988777777775
|
| >d1t8ka_ a.28.1.1 (A:) Acyl carrier protein {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Acyl carrier protein-like superfamily: ACP-like family: Acyl-carrier protein (ACP) domain: Acyl carrier protein species: Escherichia coli [TaxId: 562]
Probab=94.77 E-value=0.0029 Score=48.19 Aligned_cols=49 Identities=10% Similarity=-0.101 Sum_probs=44.6
Q ss_pred chhhh-Hh-hhcccccccchhhhhhhcCccccCCCCcccccCCCChhHHHHHHHHH
Q 008146 78 SHSIQ-SL-MASCLPFEPCNEYYSSVSSLGFFGDNGFSSFFGSNNSTATLNRRQRR 131 (576)
Q Consensus 78 ~~~~~-~~-~dsl~avel~n~l~~~~g~~~~~~~l~~t~~Fd~pt~~al~~~~~~~ 131 (576)
++.|. +| +|||..+||.+++...+|++ +|...+++++|...+..++...
T Consensus 25 ~~~l~~dLg~DSl~~~el~~~iE~~f~i~-----i~~~~~~~~~Tv~dlv~~i~~~ 75 (77)
T d1t8ka_ 25 NASFVEDLGADSLDTVELVMALEEEFDTE-----IPDEEAEKITTVQAAIDYINGH 75 (77)
T ss_dssp TCBTTTTTCCCHHHHHHHHHHHHHHHTCC-----CCHHHHTTCCBHHHHHHHHHHT
T ss_pred CCcchhccccchhHHHHHHHHHHHHhCCC-----CCHHHHHhCCCHHHHHHHHHHc
Confidence 46675 69 99999999999999999999 9999999999999999888765
|
| >d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=93.66 E-value=0.065 Score=45.73 Aligned_cols=77 Identities=14% Similarity=0.185 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCC-Cccc-ccccccccccccchhHHHHHHHHH
Q 008146 441 VGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRV-NSTKSMIGHLLGAAGAVEAIAVVQ 518 (576)
Q Consensus 441 ~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~-~~~v-~s~K~~iGH~~gAsG~~~li~~~l 518 (576)
.....+++++|+++|++++||||+..|-.+.. -.+.+.+.++-.. .+.. ..+-..+||+.+|+=.. ..-.
T Consensus 43 ~~~~~~i~~~l~~~g~~~~did~~~~Hq~~~~-----i~~~i~~~Lgl~~~k~~~s~~~l~~~GN~~sasi~~---~L~~ 114 (148)
T d1u0ma2 43 EPLAPALKELAGEHGWDASDLDFYIVHAGGPR-----ILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLD---ALRR 114 (148)
T ss_dssp HHHHHHHHHHHHTTSCCSSCCSCCEEECSHHH-----HHHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHH---HHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHCCEEEECCCCHH-----HHHHHHHHhCCChhhhhHHHHHHHhcCCCCcchHHH---HHHH
Confidence 45678899999999999999999999965553 4556666665331 1111 11224469998887332 2334
Q ss_pred HHHcCCC
Q 008146 519 AIRTGWI 525 (576)
Q Consensus 519 ~L~~g~i 525 (576)
+++++.+
T Consensus 115 ~~~~~~~ 121 (148)
T d1u0ma2 115 LFDEGGV 121 (148)
T ss_dssp HHHSCCC
T ss_pred HHHcCCC
Confidence 4555543
|
| >d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=87.15 E-value=1.7 Score=36.56 Aligned_cols=108 Identities=10% Similarity=0.061 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCC-Ccccc-cccccccccccchhHHHHHHHHH
Q 008146 441 VGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVN-STKSMIGHLLGAAGAVEAIAVVQ 518 (576)
Q Consensus 441 ~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~-~~~v~-s~K~~iGH~~gAsG~~~li~~~l 518 (576)
..+...+++.|+++|++.+||+++..|--|.. =++++.+.++-.. .+..+ .+-..+|++.+|+=...|-...
T Consensus 42 ~~i~~~~~~~l~~~gl~~~di~~~v~Hqgg~~-----Ild~v~~~L~L~~~~~~~s~~vl~~yGN~SSasi~~vL~~~~- 115 (154)
T d1bi5a2 42 KNITKALVEAFEPLGISDYNSIFWIAHPGGPA-----ILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMR- 115 (154)
T ss_dssp HHHHHHHHHHHGGGTCCCTTSSEEEECCSSHH-----HHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHcCCCccccceEeeccccHH-----HHHHHHHHhCCCHHHHHHhHHHHHhcCCCCcccHHHHHHHHH-
Confidence 45568899999999999999999999965554 4566667776332 22211 1233568888776444443322
Q ss_pred HHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEee
Q 008146 519 AIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSP 574 (576)
Q Consensus 519 ~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~ 574 (576)
+++...+... ........+..+||-|=+-..++|++
T Consensus 116 --~~~~~~~~~~------------------~g~~~~~~~~~aFG~Glt~~~~llr~ 151 (154)
T d1bi5a2 116 --KKSTQNGLKT------------------TGEGLEWGVLFGFGPGLTIETVVLRS 151 (154)
T ss_dssp --HHHHHTTCSB------------------TTTTCSEEEEEEEETTTEEEEEEEEE
T ss_pred --HhhhccCCcc------------------cCCCcCEEEEEEEchHHhHHHHHHhc
Confidence 2222111110 00123556778999998888888876
|
| >d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Pyrone synthase (PyS, chalcone synthase 2) species: Gerbera hybrid cultivar [TaxId: 18101]
Probab=86.93 E-value=1.7 Score=36.82 Aligned_cols=109 Identities=15% Similarity=0.132 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCC-CCccc-ccccccccccccchhHHHHHHHHH
Q 008146 441 VGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQN-RGLRV-NSTKSMIGHLLGAAGAVEAIAVVQ 518 (576)
Q Consensus 441 ~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~-~~~~v-~s~K~~iGH~~gAsG~~~li~~~l 518 (576)
..+...+++.|+++|++.+|||++..|--|.. =++++.+.++-. ..+.. ..+-..+|++.+||=..-|-.+.
T Consensus 47 ~~v~~~v~~~l~~~gl~~~di~~~v~Hqgg~~-----Ild~i~~~L~L~~~~l~~s~~vl~~yGNtSSaSI~~vL~~~~- 120 (160)
T d1ee0a2 47 KNIENAAEKALSPLGITDWNSVFWMVHPGGRA-----ILDQVERKLNLKEDKLRASRHVLSEYGNLISACVLFIIDEVR- 120 (160)
T ss_dssp HHHHHHHHHHHGGGTCCCGGGSEEEECCSSHH-----HHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHH-
T ss_pred HHHHHHHHHHHhhccCCccccceEeecCCcHH-----HHHHHHHHcCCCHHHHHHHHHHHHHhCCCccchHHHHHHHHH-
Confidence 45678889999999999999999999965554 455666666533 22222 12233568988887544443332
Q ss_pred HHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEeeC
Q 008146 519 AIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 519 ~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~~ 575 (576)
+++...+.. .........+..+||.|=+-..++|++.
T Consensus 121 --~~~~~~~~~------------------~~g~~~d~~ll~afG~Glt~~~~llr~~ 157 (160)
T d1ee0a2 121 --KRSMAEGKS------------------TTGEGLDCGVLFGFGPGMTVETVVLRSV 157 (160)
T ss_dssp --HHHHHTTCS------------------BTBTTBSEEEEEEEETTTEEEEEEEEEC
T ss_pred --hhhhhcCCC------------------CcCCCcCEEEEEEEChHHHHHHHHHeec
Confidence 222111111 0011235677789999988888998874
|
| >d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Dihydropinosylvin synthase species: Scots pine (Pinus sylvestris) [TaxId: 3349]
Probab=83.68 E-value=3.3 Score=34.79 Aligned_cols=109 Identities=10% Similarity=0.063 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCC-Ccccc-cccccccccccchhHHHHHHHHH
Q 008146 441 VGVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNR-GLRVN-STKSMIGHLLGAAGAVEAIAVVQ 518 (576)
Q Consensus 441 ~~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~-~~~v~-s~K~~iGH~~gAsG~~~li~~~l 518 (576)
..+...+++.|++++++.+|||++..|--|.. =++++.+.++-.. .+..+ .+-..+|++.+|+=...|-.+.
T Consensus 43 ~~i~~~~~~~l~~~~~~~~did~~i~Hqgg~~-----Ild~v~~~L~L~~~k~~~s~~~l~~~GN~sSasip~~L~~~~- 116 (156)
T d1u0ua2 43 ANIENCMVEAFSQFKISDWNKLFWVVHPGGRA-----ILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTR- 116 (156)
T ss_dssp HHHHHHHHHHHGGGTCCCGGGSEEEECCSCHH-----HHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHcCCChhhCceEeecCCcHH-----HHHHHHHHhCCCcccchhhHHHHhhcCCCCcccHHHHHHHHH-
Confidence 45668899999999999999999999966654 3455566665332 22211 1223568888776443332222
Q ss_pred HHHcCCCCCCCCCCCCCCCCCcccccCCcccccCccEEEEeccCCCcceeEEEEeeC
Q 008146 519 AIRTGWIHPNINLENPDAVVDTNVLVGPKKERLEVKAALSNSFGFGGHNSSIIFSPY 575 (576)
Q Consensus 519 ~L~~g~ipp~~~~~~p~~~~~~~~~~~~~~~~~~~~~alv~sfG~gG~na~vil~~~ 575 (576)
+++...+.. ........++..+||-|=+...+||+.-
T Consensus 117 --~~~~~~~~~------------------~~~~~~~~~~~~gfG~Glt~~~~llr~~ 153 (156)
T d1u0ua2 117 --KASLQNGCS------------------TTGEGLEMGVLFGFGPGLTIETVVLKSV 153 (156)
T ss_dssp --HHHHHHTCS------------------BSBTTBSEEEEEEEETTTEEEEEEEEEC
T ss_pred --HhhhhccCC------------------CcCCCCCEEEEEEECHHHhHHHHHHeeC
Confidence 221111110 0011235677789999888888888763
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=81.45 E-value=0.87 Score=40.26 Aligned_cols=77 Identities=21% Similarity=0.080 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEecCCCCccCcHHHHHHHHHHHcCCCCcccccccccccccccchhHHHHHHHHHHHH
Q 008146 442 GVILCIEKALAHSGVSREDVNYINAHATSTPAGDIKEYQALIHCFGQNRGLRVNSTKSMIGHLLGAAGAVEAIAVVQAIR 521 (576)
Q Consensus 442 ~~~~ai~~AL~~Agl~~~dId~ve~Hgtgt~~gD~~E~~Al~~~f~~~~~~~v~s~K~~iGH~~gAsG~~~li~~~l~L~ 521 (576)
-..++++++|+++|++++|||+|... +.|...-+.-..-+.+.++-...+. --.+.+...++++..|-.+.-.|+
T Consensus 78 la~~Aa~~aL~~ag~~~~dId~lI~~-s~t~~~~P~~aa~v~~~lg~~~~~~----~~~i~~~gC~g~~~al~~A~~~l~ 152 (200)
T d1u0ma1 78 RVPAVIQRALDDAELLATDIDVIIYV-SCTGFMMPSLTAWLINEMGFDSTTR----QIPIAQLGCAAGGAAINRAHDFCT 152 (200)
T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEEE-CSSSCCSSCHHHHHHHHTTCCTTCE----EEEECSCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCChhhhheEEEe-ccCCCCcchhHHHHHHHHhcCCCee----EeccccchhhHHHHHHHHHHHHHH
Confidence 34689999999999999999998643 4443222222222333333221111 111224445556666666666666
Q ss_pred cC
Q 008146 522 TG 523 (576)
Q Consensus 522 ~g 523 (576)
.+
T Consensus 153 ~~ 154 (200)
T d1u0ma1 153 AY 154 (200)
T ss_dssp HS
T ss_pred hC
Confidence 64
|