Query 008150
Match_columns 576
No_of_seqs 319 out of 968
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 19:19:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008150.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008150hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i3n_A Kelch-like protein 11; 100.0 7.3E-29 2.5E-33 251.3 11.5 235 58-359 25-269 (279)
2 3hve_A Gigaxonin; ubiquitin, c 100.0 1.8E-29 6.1E-34 252.5 6.5 229 58-353 24-256 (256)
3 2if5_A Zinc finger and BTB dom 99.9 8.9E-22 3.1E-26 174.8 9.7 117 38-171 3-120 (120)
4 3b84_A Zinc finger and BTB dom 99.8 4.2E-22 1.4E-26 177.5 5.9 101 58-173 17-117 (119)
5 2z8h_A Transcription regulator 99.8 1.6E-21 5.5E-26 178.1 9.7 107 58-177 29-136 (138)
6 1r29_A B-cell lymphoma 6 prote 99.8 3.2E-21 1.1E-25 173.1 10.1 120 36-172 5-125 (127)
7 3ga1_A Nucleus accumbens-assoc 99.8 1.3E-21 4.3E-26 176.6 7.4 124 31-174 4-128 (129)
8 3htm_A Speckle-type POZ protei 99.8 6.8E-21 2.3E-25 178.2 12.4 122 58-200 27-149 (172)
9 1buo_A POZ domain, protein (pr 99.8 8.6E-21 2.9E-25 169.3 11.2 100 58-173 21-120 (121)
10 2vpk_A Myoneurin; transcriptio 99.8 5.8E-21 2E-25 168.8 9.4 101 57-172 14-116 (116)
11 2vkp_A BTB/POZ domain-containi 99.8 6.8E-21 2.3E-25 166.0 9.1 103 59-174 2-109 (109)
12 3ohu_A Transcription regulator 99.8 3.3E-21 1.1E-25 172.6 7.0 100 58-170 25-125 (125)
13 4eoz_A Speckle-type POZ protei 99.8 2.2E-21 7.6E-26 176.6 5.3 122 58-200 18-140 (145)
14 2q81_A MIZ-1 protein; BTB/POZ 99.8 2.7E-21 9.3E-26 172.2 5.5 98 58-171 20-117 (119)
15 2ihc_A Transcription regulator 99.8 4.3E-21 1.5E-25 172.2 6.3 102 57-171 21-123 (124)
16 2yy9_A Zinc finger and BTB dom 99.8 5.4E-21 1.9E-25 174.3 6.5 104 57-175 17-120 (135)
17 2ppi_A Gigaxonin; BTB domain, 99.8 1.8E-20 6.2E-25 172.9 9.4 118 43-171 26-144 (144)
18 3m5b_A Zinc finger and BTB dom 99.8 2.7E-20 9.3E-25 166.8 8.7 93 60-172 25-117 (119)
19 3hqi_A Speckle-type POZ protei 99.8 1.2E-18 4.3E-23 178.5 10.5 130 59-209 168-301 (312)
20 3fkc_A Transcriptional regulat 99.7 4.2E-18 1.4E-22 151.3 9.6 88 58-155 24-112 (116)
21 2ast_A S-phase kinase-associat 99.3 1.4E-12 4.6E-17 122.5 7.2 95 68-175 3-127 (159)
22 4ajy_C Transcription elongatio 99.1 9.7E-11 3.3E-15 101.2 7.7 79 68-153 4-97 (97)
23 1fs1_B SKP1, cyclin A/CDK2-ass 99.0 4.2E-10 1.4E-14 103.7 7.6 92 68-175 4-122 (141)
24 2p1m_A SKP1-like protein 1A; F 98.9 2.5E-10 8.6E-15 107.3 1.4 92 68-174 6-125 (160)
25 1hv2_A Elongin C, ELC1; protei 98.3 1.4E-06 4.7E-11 75.5 7.2 80 67-153 5-99 (99)
26 2fnj_C Transcription elongatio 98.2 1.5E-06 5E-11 74.9 6.3 79 68-153 3-96 (96)
27 3v7d_A Suppressor of kinetocho 98.1 5.4E-06 1.8E-10 78.6 7.3 99 67-174 8-133 (169)
28 1vcb_B Protein (elongin C); tu 97.6 5.6E-05 1.9E-09 67.0 5.3 83 67-153 18-112 (112)
29 3drz_A BTB/POZ domain-containi 97.4 0.00041 1.4E-08 60.6 8.3 95 67-171 7-105 (107)
30 2eqx_A Kelch repeat and BTB do 96.7 0.00056 1.9E-08 59.3 2.4 88 185-315 10-97 (105)
31 3drx_A BTB/POZ domain-containi 95.4 0.035 1.2E-06 53.9 8.0 97 67-172 13-112 (202)
32 3kvt_A Potassium channel prote 93.0 0.054 1.8E-06 47.9 3.1 84 68-156 7-92 (115)
33 1s1g_A Potassium voltage-gated 92.8 0.13 4.4E-06 46.1 5.4 85 66-156 13-99 (124)
34 2nz0_B Potassium voltage-gated 90.4 0.16 5.3E-06 46.5 3.2 86 65-156 34-121 (140)
35 1nn7_A Potassium channel KV4.2 88.6 0.27 9.3E-06 42.6 3.2 83 68-156 2-86 (105)
36 1t1d_A Protein (potassium chan 87.6 0.89 3E-05 39.1 5.8 82 68-156 3-89 (100)
37 2yy0_A C-MYC-binding protein; 85.9 1.2 4.2E-05 34.0 5.1 34 541-574 18-51 (53)
38 1deb_A APC protein, adenomatou 80.2 3.8 0.00013 30.9 5.6 36 539-574 14-49 (54)
39 1pd7_B MAD1; PAH2, SIN3, eukar 70.2 1.3 4.5E-05 28.8 0.8 16 139-154 3-18 (26)
40 3vmx_A Voltage-gated hydrogen 58.7 16 0.00055 27.3 4.9 34 542-575 4-37 (48)
41 1vjh_A BET V I allergen family 52.7 10 0.00034 33.2 3.5 33 416-459 90-122 (122)
42 1ci6_A Transcription factor AT 48.9 34 0.0012 26.7 5.7 35 539-573 27-61 (63)
43 2yy0_A C-MYC-binding protein; 46.2 23 0.00079 26.9 4.1 29 537-565 21-49 (53)
44 2xdj_A Uncharacterized protein 37.9 53 0.0018 27.2 5.4 34 540-573 25-58 (83)
45 4dzn_A Coiled-coil peptide CC- 37.7 70 0.0024 21.3 4.8 21 541-561 8-28 (33)
46 3nmd_A CGMP dependent protein 37.3 63 0.0021 26.1 5.6 35 542-576 33-67 (72)
47 2r9r_B Paddle chimera voltage 35.5 91 0.0031 33.8 8.5 83 67-156 53-140 (514)
48 2wt7_B Transcription factor MA 34.3 75 0.0026 26.8 5.8 37 539-575 52-88 (90)
49 2eqx_A Kelch repeat and BTB do 34.3 26 0.0009 29.4 3.2 35 134-174 6-40 (105)
50 1t2k_D Cyclic-AMP-dependent tr 31.8 86 0.0029 23.9 5.5 32 541-572 28-59 (61)
51 1dip_A Delta-sleep-inducing pe 31.4 34 0.0011 27.8 3.0 34 539-572 12-45 (78)
52 1hjb_A Ccaat/enhancer binding 31.2 79 0.0027 26.4 5.5 34 540-573 41-74 (87)
53 3vp9_A General transcriptional 30.9 50 0.0017 28.0 4.2 25 549-573 50-74 (92)
54 3a2a_A Voltage-gated hydrogen 28.1 63 0.0021 24.8 3.9 33 543-575 12-44 (58)
55 2wt7_A Proto-oncogene protein 27.2 1.2E+02 0.004 23.4 5.6 34 540-573 28-61 (63)
56 2j5u_A MREC protein; bacterial 27.0 29 0.00099 34.3 2.5 35 538-572 22-59 (255)
57 3qh9_A Liprin-beta-2; coiled-c 26.4 1.1E+02 0.0038 25.2 5.3 27 541-567 18-44 (81)
58 3kin_B Kinesin heavy chain; mo 26.1 78 0.0027 27.6 4.8 30 547-576 87-116 (117)
59 3i00_A HIP-I, huntingtin-inter 23.6 1.2E+02 0.0042 26.6 5.6 28 540-567 20-58 (120)
60 1a93_B MAX protein, coiled coi 23.4 1.2E+02 0.0041 21.0 4.3 28 540-567 5-32 (34)
61 1gu4_A CAAT/enhancer binding p 21.9 1.1E+02 0.0036 25.1 4.5 32 541-572 42-73 (78)
62 3he5_B Synzip2; heterodimeric 21.9 1.3E+02 0.0043 21.9 4.3 28 544-571 5-32 (52)
63 4e61_A Protein BIM1; EB1-like 21.8 1.3E+02 0.0044 26.1 5.2 25 540-564 16-40 (106)
64 3he5_A Synzip1; heterodimeric 21.7 1.8E+02 0.0061 20.9 5.0 37 537-573 12-48 (49)
65 2w6b_A RHO guanine nucleotide 21.4 1.8E+02 0.0061 22.3 5.2 34 539-572 14-47 (56)
66 1nkp_B MAX protein, MYC proto- 21.4 1.4E+02 0.0048 24.0 5.2 33 542-574 47-79 (83)
67 1jnm_A Proto-oncogene C-JUN; B 21.4 76 0.0026 24.4 3.4 33 540-572 27-59 (62)
68 1go4_E MAD1 (mitotic arrest de 21.0 88 0.003 26.8 4.0 31 536-566 13-43 (100)
69 1ci6_A Transcription factor AT 20.3 1.4E+02 0.0049 23.0 4.8 35 541-575 22-56 (63)
No 1
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.95 E-value=7.3e-29 Score=251.33 Aligned_cols=235 Identities=14% Similarity=0.187 Sum_probs=185.6
Q ss_pred HHhhcCCceeEEEEEC---CeEeeeccchhcccCHHHHHhhccc-ccCCCCCCCCeEEec------CCCCcHHHHHHHHH
Q 008150 58 WIVRAKVASDLIVQIA---DSCFHLHKLAMVSKSEYLNRIVFKR-RSNGEKENNPMIFIS------NFPGGIEIFELVVK 127 (576)
Q Consensus 58 w~~~~~~~~DV~v~V~---~~~F~lHK~vLas~S~yfr~lf~~~-~e~~~~~~~~~v~L~------~~pgGae~felv~~ 127 (576)
.++.+|.+|||+|.|| |+.|++||.+|+++|+||++||+++ .|+. ...|.|+ +++ +++|+.+++
T Consensus 25 ~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~----~~~i~l~~~~~~~~v~--~~~f~~ll~ 98 (279)
T 3i3n_A 25 EQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESR----SGRVEMRKWSSEPGPE--PDTVEAVIE 98 (279)
T ss_dssp HHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC------------EEECCCCSSTTCSC--HHHHHHHHH
T ss_pred HHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCcccc----CCeEEeccccccCCCC--HHHHHHHHH
Confidence 4888999999999998 9999999999999999999999876 4443 3489998 565 899999999
Q ss_pred HHcCceEeeccccHHHHHHHHhhcccccccCcChHHHHHHHHHHHhhhcchhhHHHHHhccHhHHHHHHHhchhhhhhHH
Q 008150 128 FCYGWKVDVTATNIAALYSAANFLEMSDDLDQGNLITKTEAFLSFSILSSWKDTFQILKSCESIQSWAKELHILKRCSEA 207 (576)
Q Consensus 128 FcY~~~i~it~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v~~sw~~~i~~L~sC~~L~~~Ae~l~iv~rcids 207 (576)
|+|||++.++.+||..|+.||++|||++ |...|+.||.+.+. ..||..++.+|+.+++ +.
T Consensus 99 ~~Ytg~~~i~~~~v~~ll~~A~~l~i~~------L~~~c~~~L~~~l~---------~~n~~~i~~~A~~~~~-----~~ 158 (279)
T 3i3n_A 99 YMYTGRIRVSTGSVHEVLELADRFLLIR------LKEFCGEFLKKKLH---------LSNCVAIHSLAHMYTL-----SQ 158 (279)
T ss_dssp HHHHSEEEEETTTHHHHHHHHHHTTCHH------HHHHHHHHHHHHCC---------TTTHHHHHHHHHHTTC-----HH
T ss_pred hhCcCCcccCHHHHHHHHHHHHHHCcHH------HHHHHHHHHHHcCC---------cchHHHHHHHHHHcCc-----HH
Confidence 9999999999999999999999999996 99999999999884 4688899999999875 33
Q ss_pred HHHHhccCCCCccccCCCCcccccccccccccccCCCcceecccccCChhHHHHHHHHhhhcCCChhHHHHHHHHHHhhh
Q 008150 208 IALKASINKKGFTFHDGDAQGALANNVEDWEKEGRADSWWFEDVSSLRIDHFIEVINSIKRKGITSELVGSCIAKWTSKW 287 (576)
Q Consensus 208 La~kA~~~~~~f~~~~~~~~~~l~~~~~~~~~~~~~~dWW~EDl~~L~~d~f~rvI~am~~~gl~~e~I~~aL~~Yakk~ 287 (576)
|..++.. |. . +.+...+-.++|..|+.+.+..+++...-..-+|+.|+++++.|+++.
T Consensus 159 L~~~~~~----~i---------~---------~~f~~v~~~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~~W~~~~ 216 (279)
T 3i3n_A 159 LALKAAD----MI---------R---------RNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRN 216 (279)
T ss_dssp HHHHHHH----HH---------H---------HTHHHHTTSSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHH----HH---------H---------HHHHHHhcCcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHHHHHHcC
Confidence 3333321 10 0 001111235789999999977777765555557899999999999987
Q ss_pred hcccccCCCCCCcchhhhHHHHHHHHHHHHhcCCCCCccchHHHHHHHHhhhhccCCHHHHHHHHHHHHhhh
Q 008150 288 LSQITSGLNNVTPKQLTHQLRRVTTESLIRILPEEENAVSCNFLLHLLKLGLMMKINAELLKKLERRIAFML 359 (576)
Q Consensus 288 L~~~~~g~~~~~~~~~r~~~~r~LLE~IV~LLP~~~~~vsc~FLf~LLR~a~~l~aS~~Cr~~LE~rIg~qL 359 (576)
.+ . |..+...|++. |++ +.+|..+|..+++...++..++.|+..|.+...-++
T Consensus 217 ~~------------~-r~~~~~~ll~~-VRf-----~l~~~~~L~~~v~~~~l~~~~~~c~~~l~ea~~~~~ 269 (279)
T 3i3n_A 217 AE------------E-RERYFEELFKL-LRL-----SQMKPTYLTRHVKPERLVANNEVCVKLVADAVERHA 269 (279)
T ss_dssp HH------------H-HTTTHHHHHTT-SCG-----GGSCHHHHHHTTTTSHHHHTCHHHHHHHHHHHHHHH
T ss_pred HH------------H-HHHHHHHHHHh-cCC-----CCCCHHHHHHHhhccchhcCCHHHHHHHHHHHHhcc
Confidence 65 1 33445778887 465 689999999999999999999999999988775544
No 2
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.95 E-value=1.8e-29 Score=252.53 Aligned_cols=229 Identities=14% Similarity=0.137 Sum_probs=167.4
Q ss_pred HHhhcCCceeEEEEECCeEeeeccchhcccCHHHHHhhcccc---cCCCCCCCCeEEecCCCCcHHHHHHHHHHHcCceE
Q 008150 58 WIVRAKVASDLIVQIADSCFHLHKLAMVSKSEYLNRIVFKRR---SNGEKENNPMIFISNFPGGIEIFELVVKFCYGWKV 134 (576)
Q Consensus 58 w~~~~~~~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~---e~~~~~~~~~v~L~~~pgGae~felv~~FcY~~~i 134 (576)
.++.++.+|||+|.|||+.|++||.+|+++|+||++||+++. ++. ...|.|++++ +++|+.+++|+|||++
T Consensus 24 ~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~----~~~i~l~~v~--~~~f~~ll~~~Yt~~~ 97 (256)
T 3hve_A 24 SFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGS----TYKIELEGIS--VMVMREILDYIFSGQI 97 (256)
T ss_dssp TCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC---------------CEEECSSCC--HHHHHHHHHHHHHSCC
T ss_pred HHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccCC----CCeEEeCCCC--HHHHHHHHhhccCCCC
Confidence 478899999999999999999999999999999999998752 222 3589999998 8999999999999999
Q ss_pred eeccccHHHHHHHHhhcccccccCcChHHHHHHHHHHHhhhcchhhHHHHHhccHhHHHHHHHhchhhhhhHHHHHHhcc
Q 008150 135 DVTATNIAALYSAANFLEMSDDLDQGNLITKTEAFLSFSILSSWKDTFQILKSCESIQSWAKELHILKRCSEAIALKASI 214 (576)
Q Consensus 135 ~it~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v~~sw~~~i~~L~sC~~L~~~Ae~l~iv~rcidsLa~kA~~ 214 (576)
.++.+||..++.||++|||++ |...|+.||.+.+. ..||..++.+|+.+++ +.|..++..
T Consensus 98 ~i~~~~v~~ll~~A~~l~i~~------l~~~c~~~L~~~l~---------~~n~~~i~~~A~~~~~-----~~L~~~~~~ 157 (256)
T 3hve_A 98 RLNEDTIQDVVQAADLLLLTD------LKTLCCEFLEGCIA---------AENCIGIRDFALHYCL-----HHVHYLATE 157 (256)
T ss_dssp CCC-CCHHHHHHHHHHHTCHH------HHHHHHHHHHHTCC---------SSTTHHHHHHHHHTTC-----HHHHHHHHH
T ss_pred cccHhHHHHHHHHHHHHChHH------HHHHHHHHHHhhCC---------HhhHHHHHHHHHHcCc-----HHHHHHHHH
Confidence 999999999999999999996 99999999999984 4588899999998875 344333321
Q ss_pred CCCCccccCCCCcccccccccccccccCCCcceecccccCChhHHHHHHHHhhhcCCChhHHHHHHHHHHhhhhcccccC
Q 008150 215 NKKGFTFHDGDAQGALANNVEDWEKEGRADSWWFEDVSSLRIDHFIEVINSIKRKGITSELVGSCIAKWTSKWLSQITSG 294 (576)
Q Consensus 215 ~~~~f~~~~~~~~~~l~~~~~~~~~~~~~~dWW~EDl~~L~~d~f~rvI~am~~~gl~~e~I~~aL~~Yakk~L~~~~~g 294 (576)
|. . +.+...+-.++|..|+.+.+..++....-..-+|+.|++++++|+++..+ .
T Consensus 158 ----~i---------~---------~~f~~v~~~~~f~~L~~~~l~~lL~~d~L~v~~E~~v~~av~~W~~~~~~----~ 211 (256)
T 3hve_A 158 ----YL---------E---------THFRDVSSTEEFLELSPQKLKEVISLEKLNVGNERYVFEAVIRWIAHDTE----I 211 (256)
T ss_dssp ----HH---------H---------HHHHHHTTCHHHHSSCHHHHHHHHHCC-------CTTHHHHTTTCCC--C----C
T ss_pred ----HH---------H---------HHHHHHhCCcchhcCCHHHHHHHHccCCCCCCCHHHHHHHHHHHHHcCHH----H
Confidence 10 0 00011122578999999998888877666655788999999999987654 1
Q ss_pred CCCCCcchhhhHHHHHHHHHHHHhcCCCCCccchHHHHHHHHhhhhccCC-HHHHHHHHH
Q 008150 295 LNNVTPKQLTHQLRRVTTESLIRILPEEENAVSCNFLLHLLKLGLMMKIN-AELLKKLER 353 (576)
Q Consensus 295 ~~~~~~~~~r~~~~r~LLE~IV~LLP~~~~~vsc~FLf~LLR~a~~l~aS-~~Cr~~LE~ 353 (576)
|..+...|++.| ++ +.+|..||...++...++..+ +.|+..|++
T Consensus 212 ---------R~~~~~~ll~~V-Rf-----~~l~~~~l~~~v~~~~l~~~~~~~c~~ll~~ 256 (256)
T 3hve_A 212 ---------RKVHMKDVMSAL-WV-----SGLDSSYLREQMLNEPLVREIVKECSNIPLS 256 (256)
T ss_dssp ---------STTTHHHHHHHH-HH-----HTTCC-CHHHHHHTSTTHHHHHCC-------
T ss_pred ---------HHHHHHHHHHhC-CC-----CCCCHHHHHHHHhcChHHHhhHHHHHHHhhC
Confidence 334567899995 66 689999999999999999998 689998875
No 3
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.85 E-value=8.9e-22 Score=174.84 Aligned_cols=117 Identities=19% Similarity=0.313 Sum_probs=98.0
Q ss_pred eecCCCcccchHHHHhhhhHHHhhcCCceeEEEEECCeEeeeccchhcccCHHHHHhhccc-ccCCCCCCCCeEEecCCC
Q 008150 38 IIFPANVSMVAEALERRNKDWIVRAKVASDLIVQIADSCFHLHKLAMVSKSEYLNRIVFKR-RSNGEKENNPMIFISNFP 116 (576)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~-~e~~~~~~~~~v~L~~~p 116 (576)
+.+|.+.+.+...+. .++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. .++. ...|.|++++
T Consensus 3 ~~~~~h~~~l~~~l~-----~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~----~~~i~l~~~~ 73 (120)
T 2if5_A 3 IPFPDHSSDILSGLN-----EQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVDQ----QNVYEIDFVS 73 (120)
T ss_dssp CCCTTHHHHHHHHHH-----HHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC-----C----CSEEECCSSC
T ss_pred cCccchHHHHHHHHH-----HHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccccC----CceEEeCCCC
Confidence 345544444443333 37788999999999999999999999999999999999875 3332 3589999998
Q ss_pred CcHHHHHHHHHHHcCceEeeccccHHHHHHHHhhcccccccCcChHHHHHHHHHH
Q 008150 117 GGIEIFELVVKFCYGWKVDVTATNIAALYSAANFLEMSDDLDQGNLITKTEAFLS 171 (576)
Q Consensus 117 gGae~felv~~FcY~~~i~it~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~ 171 (576)
+++|+.+++|+|||++.++.+|+..|+.||++|+|++ |++.|++||+
T Consensus 74 --~~~f~~ll~~~Yt~~~~~~~~~~~~ll~~A~~~~i~~------L~~~C~~~L~ 120 (120)
T 2if5_A 74 --AEALTALMDFAYTATLTVSTANVGDILSAARLLEIPA------VSHVCADLLD 120 (120)
T ss_dssp --HHHHHHHHHHHHHSCCCCCGGGHHHHHHHHHHTTCHH------HHHHHHHHHC
T ss_pred --HHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHhCCHH------HHHHHHHHhC
Confidence 8899999999999999999999999999999999996 9999999983
No 4
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.85 E-value=4.2e-22 Score=177.52 Aligned_cols=101 Identities=16% Similarity=0.185 Sum_probs=91.6
Q ss_pred HHhhcCCceeEEEEECCeEeeeccchhcccCHHHHHhhcccccCCCCCCCCeEEecCCCCcHHHHHHHHHHHcCceEeec
Q 008150 58 WIVRAKVASDLIVQIADSCFHLHKLAMVSKSEYLNRIVFKRRSNGEKENNPMIFISNFPGGIEIFELVVKFCYGWKVDVT 137 (576)
Q Consensus 58 w~~~~~~~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~~~~~v~L~~~pgGae~felv~~FcY~~~i~it 137 (576)
.++.++.+|||+|.|+|+.|++||.+|+++|+||++||.++. ...|.|++++ +++|+.+++|+|||++.++
T Consensus 17 ~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~-------~~~i~l~~~~--~~~f~~ll~~iYtg~~~~~ 87 (119)
T 3b84_A 17 KQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS-------GGSVVLPAGF--AEIFGLLLDFFYTGHLALT 87 (119)
T ss_dssp HHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT-------CCCEEECGGG--HHHHHHHHHHHHHSCCCCC
T ss_pred HHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC-------CCeEEeCCCC--HHHHHHHHHHHcCCCCccC
Confidence 378899999999999999999999999999999999997643 1379999998 8899999999999999999
Q ss_pred cccHHHHHHHHhhcccccccCcChHHHHHHHHHHHh
Q 008150 138 ATNIAALYSAANFLEMSDDLDQGNLITKTEAFLSFS 173 (576)
Q Consensus 138 ~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~ 173 (576)
.+||..|+.||++|+|++ |.+.|+.||.+.
T Consensus 88 ~~~v~~ll~~A~~~~i~~------L~~~C~~~l~~~ 117 (119)
T 3b84_A 88 SGNRDQVLLAARELRVPE------AVELCQSFKPKT 117 (119)
T ss_dssp TTTHHHHHHHHHHTTCHH------HHHHHHHCC---
T ss_pred HHHHHHHHHHHHHhCcHH------HHHHHHHHHHHc
Confidence 999999999999999996 999999999764
No 5
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.85 E-value=1.6e-21 Score=178.06 Aligned_cols=107 Identities=19% Similarity=0.348 Sum_probs=96.4
Q ss_pred HHhhcCCceeEEEEECCeEeeeccchhcccCHHHHHhhcccccCCCCCCCCeEEec-CCCCcHHHHHHHHHHHcCceEee
Q 008150 58 WIVRAKVASDLIVQIADSCFHLHKLAMVSKSEYLNRIVFKRRSNGEKENNPMIFIS-NFPGGIEIFELVVKFCYGWKVDV 136 (576)
Q Consensus 58 w~~~~~~~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~~~~~v~L~-~~pgGae~felv~~FcY~~~i~i 136 (576)
.++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+.... ...|.|+ +++ +++|+.+++|+|||++.+
T Consensus 29 ~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e-----~~~i~l~~~v~--~~~~~~lL~~~Ytg~~~i 101 (138)
T 2z8h_A 29 DQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDA-----ELTVTLPEEVT--VKGFEPLIQFAYTAKLIL 101 (138)
T ss_dssp HHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCT-----TEEEECCTTSC--HHHHHHHHHHHHHSCCCC
T ss_pred HHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCC-----CceEEeCCCCC--HHHHHHHHHHhcCCCccc
Confidence 47788999999999999999999999999999999999875321 1378884 887 889999999999999999
Q ss_pred ccccHHHHHHHHhhcccccccCcChHHHHHHHHHHHhhhcc
Q 008150 137 TATNIAALYSAANFLEMSDDLDQGNLITKTEAFLSFSILSS 177 (576)
Q Consensus 137 t~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v~~s 177 (576)
+.+||..|+.||++|||++ |++.|+.||.+.+..+
T Consensus 102 ~~~~v~~ll~~A~~~~i~~------L~~~C~~~l~~~l~~s 136 (138)
T 2z8h_A 102 SKDNVDEVCRCVEFLSVHN------IEESCFQFLKFKFLDS 136 (138)
T ss_dssp CTTTHHHHHHHHHHHTCGG------GHHHHHHHTTCCCSCC
T ss_pred CHHHHHHHHHHHHHhCCHH------HHHHHHHHHHHhcccc
Confidence 9999999999999999996 9999999999887654
No 6
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.84 E-value=3.2e-21 Score=173.11 Aligned_cols=120 Identities=19% Similarity=0.335 Sum_probs=101.4
Q ss_pred ceeecCCCcccchHHHHhhhhHHHhhcCCceeEEEEECCeEeeeccchhcccCHHHHHhhcccccCCCCCCCCeEEe-cC
Q 008150 36 RCIIFPANVSMVAEALERRNKDWIVRAKVASDLIVQIADSCFHLHKLAMVSKSEYLNRIVFKRRSNGEKENNPMIFI-SN 114 (576)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~~~~~v~L-~~ 114 (576)
..+.+|.+...+...+. .++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+..... ...|.| ++
T Consensus 5 ~~~~~~~~~~~l~~~l~-----~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e~----~~~i~l~~~ 75 (127)
T 1r29_A 5 SQIQFTRHASDVLLNLN-----RLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKRN----LSVINLDPE 75 (127)
T ss_dssp CCCCCTTHHHHHHHHHH-----HHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTTT----CSEEECCTT
T ss_pred ccccchhHHHHHHHHHH-----HHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccCC----CCEEEeCCC
Confidence 34445554444443333 377899999999999999999999999999999999998753212 358999 89
Q ss_pred CCCcHHHHHHHHHHHcCceEeeccccHHHHHHHHhhcccccccCcChHHHHHHHHHHH
Q 008150 115 FPGGIEIFELVVKFCYGWKVDVTATNIAALYSAANFLEMSDDLDQGNLITKTEAFLSF 172 (576)
Q Consensus 115 ~pgGae~felv~~FcY~~~i~it~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~ 172 (576)
++ +++|+.+++|+|||++.++.+|+..|+.||++|+|++ |.+.|+.||.+
T Consensus 76 ~~--~~~f~~ll~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~------L~~~c~~~l~~ 125 (127)
T 1r29_A 76 IN--PEGFNILLDFMYTSRLNLREGNIMAVMATAMYLQMEH------VVDTCRKFIKA 125 (127)
T ss_dssp SC--HHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHHHHHT
T ss_pred CC--HHHHHHHHHHHcCCCcCcCHHHHHHHHHHHHHhCCHH------HHHHHHHHHHh
Confidence 98 8899999999999999999999999999999999996 99999999975
No 7
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.84 E-value=1.3e-21 Score=176.62 Aligned_cols=124 Identities=17% Similarity=0.322 Sum_probs=96.4
Q ss_pred CCCCCceeecCCCcccchHHHHhhhhHHHhhcCCceeEEEEECCeEeeeccchhcccCHHHHHhhcccccCCCCCCCCeE
Q 008150 31 GGKPNRCIIFPANVSMVAEALERRNKDWIVRAKVASDLIVQIADSCFHLHKLAMVSKSEYLNRIVFKRRSNGEKENNPMI 110 (576)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~~~~~v 110 (576)
|..+..++.+|.+...+...+. .++.++.+|||+|.|+|+.|++||.+|+++|+||++||.... ...|
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~-----~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~~-------~~~i 71 (129)
T 3ga1_A 4 GSAQTLQMEIPNFGNSILECLN-----EQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNSR-------SAVV 71 (129)
T ss_dssp ---CEEEEECTTHHHHHHHHHH-----HHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHCC-------CSEE
T ss_pred CCCceEEeecCcHHHHHHHHHH-----HHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCCC-------CCEE
Confidence 3445566777765555544443 367789999999999999999999999999999999998751 2489
Q ss_pred Eec-CCCCcHHHHHHHHHHHcCceEeeccccHHHHHHHHhhcccccccCcChHHHHHHHHHHHhh
Q 008150 111 FIS-NFPGGIEIFELVVKFCYGWKVDVTATNIAALYSAANFLEMSDDLDQGNLITKTEAFLSFSI 174 (576)
Q Consensus 111 ~L~-~~pgGae~felv~~FcY~~~i~it~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v 174 (576)
.|+ +++ +++|+.+++|+|||++.++.+||..|+.||++|||++ |++.|++||.+..
T Consensus 72 ~l~~~~~--~~~f~~ll~~iYtg~~~i~~~~~~~ll~~A~~~~i~~------l~~~C~~~L~~~~ 128 (129)
T 3ga1_A 72 ELPAAVQ--PQSFQQILSFCYTGRLSMNVGDQDLLMYTAGFLQIQE------IMEKGTEFFLKVS 128 (129)
T ss_dssp ECCTTCC--HHHHHHHHHHHHHSEEECCTTTHHHHHHHHHHTTBTT------SSCC---------
T ss_pred EECCCCC--HHHHHHHHHHHhCCccccCHHHHHHHHHHHHHhCCHH------HHHHHHHHHHHhc
Confidence 996 888 8999999999999999999999999999999999997 7888999998753
No 8
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.84 E-value=6.8e-21 Score=178.20 Aligned_cols=122 Identities=16% Similarity=0.158 Sum_probs=110.0
Q ss_pred HHhhcCCceeEEEEECCeEeeeccchhcccCHHHHHhhccc-ccCCCCCCCCeEEecCCCCcHHHHHHHHHHHcCceEee
Q 008150 58 WIVRAKVASDLIVQIADSCFHLHKLAMVSKSEYLNRIVFKR-RSNGEKENNPMIFISNFPGGIEIFELVVKFCYGWKVDV 136 (576)
Q Consensus 58 w~~~~~~~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~-~e~~~~~~~~~v~L~~~pgGae~felv~~FcY~~~i~i 136 (576)
.++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. .++. ...|.|++++ +++|+.+++|+||+++.+
T Consensus 27 ~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~----~~~i~l~~~~--~~~f~~~l~~~Yt~~~~~ 100 (172)
T 3htm_A 27 GLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESK----KNRVEINDVE--PEVFKEMMCFIYTGKAPN 100 (172)
T ss_dssp HHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGGG----TTEEEECSSC--HHHHHHHHHHHHHSCCTT
T ss_pred HHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccccC----CCeEEecCCC--HHHHHHHHHHHhCCCCCC
Confidence 47788999999999999999999999999999999999875 3433 3589999998 899999999999999999
Q ss_pred ccccHHHHHHHHhhcccccccCcChHHHHHHHHHHHhhhcchhhHHHHHhccHhHHHHHHHhch
Q 008150 137 TATNIAALYSAANFLEMSDDLDQGNLITKTEAFLSFSILSSWKDTFQILKSCESIQSWAKELHI 200 (576)
Q Consensus 137 t~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v~~sw~~~i~~L~sC~~L~~~Ae~l~i 200 (576)
+.+|+..|+.+|++|+|++ |.+.|+.||.+.+ ...+|..++.+|+.+++
T Consensus 101 ~~~~~~~ll~~A~~~~~~~------l~~~c~~~l~~~l---------~~~n~~~~~~~A~~~~~ 149 (172)
T 3htm_A 101 LDKMADDLLAAADKYALER------LKVMCEDALCSNL---------SVENAAEILILADLHSA 149 (172)
T ss_dssp GGGTHHHHHHHHHHTTCHH------HHHHHHHHHHHTC---------CTTTHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHhC---------CHHHHHHHHHHHHHhCc
Confidence 9999999999999999996 9999999999988 44688888888888875
No 9
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.84 E-value=8.6e-21 Score=169.29 Aligned_cols=100 Identities=16% Similarity=0.287 Sum_probs=92.9
Q ss_pred HHhhcCCceeEEEEECCeEeeeccchhcccCHHHHHhhcccccCCCCCCCCeEEecCCCCcHHHHHHHHHHHcCceEeec
Q 008150 58 WIVRAKVASDLIVQIADSCFHLHKLAMVSKSEYLNRIVFKRRSNGEKENNPMIFISNFPGGIEIFELVVKFCYGWKVDVT 137 (576)
Q Consensus 58 w~~~~~~~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~~~~~v~L~~~pgGae~felv~~FcY~~~i~it 137 (576)
.++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. ...|.|++++ +++|+.+++|+|||++.++
T Consensus 21 ~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~--------~~~i~l~~~~--~~~f~~ll~~~Ytg~~~~~ 90 (121)
T 1buo_A 21 QMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN--------SQHYTLDFLS--PKTFQQILEYAYTATLQAK 90 (121)
T ss_dssp HHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC--------CSEEEECSSC--HHHHHHHHHHHHHSCCCCC
T ss_pred HHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC--------CcEEEeCCCC--HHHHHHHHHhhcCCCcCCC
Confidence 37788999999999999999999999999999999999753 2489999998 8999999999999999999
Q ss_pred cccHHHHHHHHhhcccccccCcChHHHHHHHHHHHh
Q 008150 138 ATNIAALYSAANFLEMSDDLDQGNLITKTEAFLSFS 173 (576)
Q Consensus 138 ~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~ 173 (576)
.+|+..++.||++|+|++ |.+.|+.||.+.
T Consensus 91 ~~~~~~ll~~A~~~~i~~------L~~~c~~~l~~~ 120 (121)
T 1buo_A 91 AEDLDDLLYAAEILEIEY------LEEQCLKMLETI 120 (121)
T ss_dssp GGGHHHHHHHHHHHTCHH------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCHH------HHHHHHHHHHHh
Confidence 999999999999999996 999999999874
No 10
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.83 E-value=5.8e-21 Score=168.83 Aligned_cols=101 Identities=20% Similarity=0.324 Sum_probs=91.6
Q ss_pred HHHhhcCCceeEEEEECCeEeeeccchhcccCHHHHHhhcccccCCCCCCCCeEEec--CCCCcHHHHHHHHHHHcCceE
Q 008150 57 DWIVRAKVASDLIVQIADSCFHLHKLAMVSKSEYLNRIVFKRRSNGEKENNPMIFIS--NFPGGIEIFELVVKFCYGWKV 134 (576)
Q Consensus 57 ~w~~~~~~~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~~~~~v~L~--~~pgGae~felv~~FcY~~~i 134 (576)
..++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+.. ...|.|+ +++ +++|+.+++|+|||++
T Consensus 14 ~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~~-------~~~i~l~~~~~~--~~~f~~ll~~~Yt~~~ 84 (116)
T 2vpk_A 14 NKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRSTS-------ENNVFLDQSQVK--ADGFQKLLEFIYTGTL 84 (116)
T ss_dssp HHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCC-------CSCEECCTTTCC--HHHHHHHHHHHHHSCC
T ss_pred HHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCCC-------CCeEEeecCCCC--HHHHHHHHHHHcCCCc
Confidence 3478899999999999999999999999999999999998652 2368887 887 8899999999999999
Q ss_pred eeccccHHHHHHHHhhcccccccCcChHHHHHHHHHHH
Q 008150 135 DVTATNIAALYSAANFLEMSDDLDQGNLITKTEAFLSF 172 (576)
Q Consensus 135 ~it~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~ 172 (576)
.++.+||..|+.||++|||++ |++.|++||.+
T Consensus 85 ~~~~~~v~~ll~~A~~~~i~~------L~~~C~~~l~~ 116 (116)
T 2vpk_A 85 NLDSWNVKEIHQAADYLKVEE------VVTKCKIKMED 116 (116)
T ss_dssp CCCTTTHHHHHHHHHHTTCHH------HHHHHHHHHC-
T ss_pred ccCHHHHHHHHHHHHHhCCHH------HHHHHHHHHhC
Confidence 999999999999999999995 99999999853
No 11
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.83 E-value=6.8e-21 Score=165.96 Aligned_cols=103 Identities=17% Similarity=0.258 Sum_probs=91.5
Q ss_pred HhhcCCceeEEEEECC----eEeeeccchhcccCHHHHHhhccc-ccCCCCCCCCeEEecCCCCcHHHHHHHHHHHcCce
Q 008150 59 IVRAKVASDLIVQIAD----SCFHLHKLAMVSKSEYLNRIVFKR-RSNGEKENNPMIFISNFPGGIEIFELVVKFCYGWK 133 (576)
Q Consensus 59 ~~~~~~~~DV~v~V~~----~~F~lHK~vLas~S~yfr~lf~~~-~e~~~~~~~~~v~L~~~pgGae~felv~~FcY~~~ 133 (576)
++.++.+|||+|.|+| +.|++||.+|+++|+||++||.+. .|+. ..|.|++++ +++|+.+++|+||++
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-----~~i~l~~~~--~~~f~~~l~~iYt~~ 74 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-----SEIHIPDVE--PAAFLILLKYMYSDE 74 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C-----CEEEETTSC--HHHHHHHHHHHHHCC
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-----CeEEeCCCC--HHHHHHHHHHHcCCC
Confidence 4578999999999998 999999999999999999999875 3332 489999998 889999999999999
Q ss_pred EeeccccHHHHHHHHhhcccccccCcChHHHHHHHHHHHhh
Q 008150 134 VDVTATNIAALYSAANFLEMSDDLDQGNLITKTEAFLSFSI 174 (576)
Q Consensus 134 i~it~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v 174 (576)
+.++.+||..++.+|++++|++ |.+.|+.||.+.+
T Consensus 75 ~~~~~~~~~~ll~~A~~~~~~~------L~~~c~~~l~~~l 109 (109)
T 2vkp_A 75 IDLEADTVLATLYAAKKYIVPA------LAKACVNFLETSL 109 (109)
T ss_dssp CCCCTTTHHHHHHHHHHTTCHH------HHHHHHHHHHHHC
T ss_pred ccCCHHHHHHHHHHHHHhCcHH------HHHHHHHHHHhhC
Confidence 9999999999999999999996 9999999998753
No 12
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.83 E-value=3.3e-21 Score=172.59 Aligned_cols=100 Identities=20% Similarity=0.329 Sum_probs=89.8
Q ss_pred HHhhcCCceeEEEEECCeEeeeccchhcccCHHHHHhhcccccCCCCCCCCeEEecC-CCCcHHHHHHHHHHHcCceEee
Q 008150 58 WIVRAKVASDLIVQIADSCFHLHKLAMVSKSEYLNRIVFKRRSNGEKENNPMIFISN-FPGGIEIFELVVKFCYGWKVDV 136 (576)
Q Consensus 58 w~~~~~~~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~~~~~v~L~~-~pgGae~felv~~FcY~~~i~i 136 (576)
.++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+.... ...|.|++ ++ +++|+.+++|+|||++.+
T Consensus 25 ~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e-----~~~i~l~~~~~--~~~f~~~l~~iYtg~~~~ 97 (125)
T 3ohu_A 25 DQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN-----DLVVSLPEEVT--ARGFGPLLQFAYTAKLLL 97 (125)
T ss_dssp HHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS-----SCEEECCTTCC--HHHHHHHHHHHTTSEEEE
T ss_pred HHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC-----CcEEEeCCCCC--HHHHHHHHHhHcCCceEE
Confidence 37788999999999999999999999999999999999875321 24899987 87 899999999999999999
Q ss_pred ccccHHHHHHHHhhcccccccCcChHHHHHHHHH
Q 008150 137 TATNIAALYSAANFLEMSDDLDQGNLITKTEAFL 170 (576)
Q Consensus 137 t~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL 170 (576)
+.+||..|+.||++|+|++ |.+.|++||
T Consensus 98 ~~~~v~~ll~~A~~l~i~~------L~~~C~~~L 125 (125)
T 3ohu_A 98 SRENIREVIRCAEFLRMHN------LEDSCFSFL 125 (125)
T ss_dssp CTTTHHHHHHHHHHHTBSS------CTTSSCCCC
T ss_pred CHHHHHHHHHHHHHhCCHH------HHHHHHHhC
Confidence 9999999999999999997 777788775
No 13
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.83 E-value=2.2e-21 Score=176.62 Aligned_cols=122 Identities=16% Similarity=0.158 Sum_probs=91.5
Q ss_pred HHhhcCCceeEEEEECCeEeeeccchhcccCHHHHHhhccc-ccCCCCCCCCeEEecCCCCcHHHHHHHHHHHcCceEee
Q 008150 58 WIVRAKVASDLIVQIADSCFHLHKLAMVSKSEYLNRIVFKR-RSNGEKENNPMIFISNFPGGIEIFELVVKFCYGWKVDV 136 (576)
Q Consensus 58 w~~~~~~~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~-~e~~~~~~~~~v~L~~~pgGae~felv~~FcY~~~i~i 136 (576)
.++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. .++. ...|.|++++ +++|+.+++|+||+++.+
T Consensus 18 ~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~----~~~i~l~~~~--~~~~~~~l~~~Y~~~~~~ 91 (145)
T 4eoz_A 18 GLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESK----KNRVEINDVE--PEVFKEMMCFIYTGKAPN 91 (145)
T ss_dssp HHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHHH----HTEEEECSSC--HHHHHHHHHHHHHSCCTT
T ss_pred HHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCCC----CceEEecCCC--HHHHHHHHHhhccCccCC
Confidence 46778999999999999999999999999999999999875 3332 2489999998 899999999999999999
Q ss_pred ccccHHHHHHHHhhcccccccCcChHHHHHHHHHHHhhhcchhhHHHHHhccHhHHHHHHHhch
Q 008150 137 TATNIAALYSAANFLEMSDDLDQGNLITKTEAFLSFSILSSWKDTFQILKSCESIQSWAKELHI 200 (576)
Q Consensus 137 t~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v~~sw~~~i~~L~sC~~L~~~Ae~l~i 200 (576)
+.+|+..++.+|++|+|++ |...|+.||.+.+ ...||..++.+|+.+++
T Consensus 92 ~~~~~~~ll~~A~~~~~~~------l~~~c~~~l~~~l---------~~~n~~~~l~~A~~~~~ 140 (145)
T 4eoz_A 92 LDKMADDLLAAADKYALER------LKVMCEDALCSNL---------SVENAAEILILADLHSA 140 (145)
T ss_dssp GGGTHHHHHHHHHHTTCHH------HHHHHHCC-------------------------------
T ss_pred cHHHHHHHHHHHHHhCHHH------HHHHHHHHHHHhC---------CHHHHHHHHHHHHHhCH
Confidence 9999999999999999996 9999999999988 56799999999999876
No 14
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.83 E-value=2.7e-21 Score=172.23 Aligned_cols=98 Identities=21% Similarity=0.336 Sum_probs=90.5
Q ss_pred HHhhcCCceeEEEEECCeEeeeccchhcccCHHHHHhhcccccCCCCCCCCeEEecCCCCcHHHHHHHHHHHcCceEeec
Q 008150 58 WIVRAKVASDLIVQIADSCFHLHKLAMVSKSEYLNRIVFKRRSNGEKENNPMIFISNFPGGIEIFELVVKFCYGWKVDVT 137 (576)
Q Consensus 58 w~~~~~~~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~~~~~v~L~~~pgGae~felv~~FcY~~~i~it 137 (576)
.++.++.+|||+|.|+|+.|++||.+|+++|+||++||++. ...|.|++++ +++|+.+++|+|||++.++
T Consensus 20 ~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~--------~~~i~l~~~~--~~~f~~ll~~~Ytg~~~i~ 89 (119)
T 2q81_A 20 QQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQ--------KDVVHLDISN--AAGLGQVLEFMYTAKLSLS 89 (119)
T ss_dssp HHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHC--------CSGGGGGGCC--HHHHHHHHHHHHHSCCCCC
T ss_pred HHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcCC--------CCEEEeCCCC--HHHHHHHHHHHcCCCCccC
Confidence 47889999999999999999999999999999999999762 1367888887 8899999999999999999
Q ss_pred cccHHHHHHHHhhcccccccCcChHHHHHHHHHH
Q 008150 138 ATNIAALYSAANFLEMSDDLDQGNLITKTEAFLS 171 (576)
Q Consensus 138 ~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~ 171 (576)
.+||..|+.||++|||++ |++.|++||.
T Consensus 90 ~~~~~~ll~~A~~l~i~~------L~~~C~~~l~ 117 (119)
T 2q81_A 90 PENVDDVLAVATFLQMQD------IITACHALKS 117 (119)
T ss_dssp TTTHHHHHHHHHHTTCHH------HHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCHH------HHHHHHHHHh
Confidence 999999999999999996 9999999985
No 15
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.82 E-value=4.3e-21 Score=172.15 Aligned_cols=102 Identities=17% Similarity=0.319 Sum_probs=90.0
Q ss_pred HHHhhcCCceeEEEEECCeEeeeccchhcccCHHHHHhhcccccCCCCCCCCeEEe-cCCCCcHHHHHHHHHHHcCceEe
Q 008150 57 DWIVRAKVASDLIVQIADSCFHLHKLAMVSKSEYLNRIVFKRRSNGEKENNPMIFI-SNFPGGIEIFELVVKFCYGWKVD 135 (576)
Q Consensus 57 ~w~~~~~~~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~~~~~v~L-~~~pgGae~felv~~FcY~~~i~ 135 (576)
..++.++.+|||+|.|+|+.|++||.+|+++|+||++||++.... ...|.| .+++ +++|+.+++|+|||++.
T Consensus 21 ~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e-----~~~i~l~~~v~--~~~f~~lL~~iYtg~~~ 93 (124)
T 2ihc_A 21 NDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADG-----ELNITLPEEVT--VKGFEPLIQFAYTAKLI 93 (124)
T ss_dssp HHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC--------CEEEECCTTSC--HHHHHHHHHHHHHSEEE
T ss_pred HHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCC-----CceEeecCCcC--HHHHHHHHHHhcCCCcc
Confidence 347889999999999999999999999999999999999875321 137888 4887 88999999999999999
Q ss_pred eccccHHHHHHHHhhcccccccCcChHHHHHHHHHH
Q 008150 136 VTATNIAALYSAANFLEMSDDLDQGNLITKTEAFLS 171 (576)
Q Consensus 136 it~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~ 171 (576)
++.+||..|+.||++|||++ |++.|+.||.
T Consensus 94 i~~~~v~~ll~~A~~~~~~~------L~~~C~~~l~ 123 (124)
T 2ihc_A 94 LSKENVDEVCKCVEFLSVHN------IEESCFQFLK 123 (124)
T ss_dssp EETTTHHHHHHHHHHHTBSS------CCGGGGGTC-
T ss_pred cCHHHHHHHHHHHHHHCCHH------HHHHHHHHHh
Confidence 99999999999999999997 7888999875
No 16
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.82 E-value=5.4e-21 Score=174.26 Aligned_cols=104 Identities=17% Similarity=0.212 Sum_probs=91.3
Q ss_pred HHHhhcCCceeEEEEECCeEeeeccchhcccCHHHHHhhcccccCCCCCCCCeEEecCCCCcHHHHHHHHHHHcCceEee
Q 008150 57 DWIVRAKVASDLIVQIADSCFHLHKLAMVSKSEYLNRIVFKRRSNGEKENNPMIFISNFPGGIEIFELVVKFCYGWKVDV 136 (576)
Q Consensus 57 ~w~~~~~~~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~~~~~v~L~~~pgGae~felv~~FcY~~~i~i 136 (576)
..++.++.+|||+|.|+|+.|++||.+|+++|+||++||.... ...|.|++++ +++|+.+++|+||+++.+
T Consensus 17 ~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~-------~~~i~l~~~~--~~~f~~lL~fiYtg~~~i 87 (135)
T 2yy9_A 17 NKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT-------GGSVVLPAGF--AEIFGLLLDFFYTGHLAL 87 (135)
T ss_dssp HHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC-----------CCEEECGGG--HHHHHHHHHHHHHSCCCC
T ss_pred HHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC-------CCeEEeCCCC--HHHHHHHHHHHhCCCCCC
Confidence 3488899999999999999999999999999999999997643 1379999998 899999999999999999
Q ss_pred ccccHHHHHHHHhhcccccccCcChHHHHHHHHHHHhhh
Q 008150 137 TATNIAALYSAANFLEMSDDLDQGNLITKTEAFLSFSIL 175 (576)
Q Consensus 137 t~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v~ 175 (576)
+.+||..|+.||++|||++ |++.|+.||.+.+.
T Consensus 88 ~~~~v~~ll~~A~~l~i~~------L~~~C~~~l~~~l~ 120 (135)
T 2yy9_A 88 TSGNRDQVLLAAKELRVPE------AVELCQSFQPQTSV 120 (135)
T ss_dssp CTTTHHHHHHHHHHTTCHH------HHHHHHHCCC----
T ss_pred CHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHhcc
Confidence 9999999999999999996 99999999988763
No 17
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.82 E-value=1.8e-20 Score=172.88 Aligned_cols=118 Identities=14% Similarity=0.185 Sum_probs=95.1
Q ss_pred CcccchHHHHhhhhHHHhhcCCceeEEEEECCeEeeeccchhcccCHHHHHhhccc-ccCCCCCCCCeEEecCCCCcHHH
Q 008150 43 NVSMVAEALERRNKDWIVRAKVASDLIVQIADSCFHLHKLAMVSKSEYLNRIVFKR-RSNGEKENNPMIFISNFPGGIEI 121 (576)
Q Consensus 43 ~~~~~~~~~~~~~~~w~~~~~~~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~-~e~~~~~~~~~v~L~~~pgGae~ 121 (576)
+.+..+..+... -..++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. .+... ....|.|++++ +++
T Consensus 26 ~~~~h~~~l~~~-l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~--~~~~I~l~~v~--~~~ 100 (144)
T 2ppi_A 26 SDPQHAARLLRA-LSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDG--STYKIELEGIS--VMV 100 (144)
T ss_dssp CCTTHHHHHHHH-HHHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-------CCCEEECCSSC--HHH
T ss_pred cCcchHHHHHHH-HHHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccC--CCcEEEeCCCC--HHH
Confidence 344444444333 2337789999999999999999999999999999999999865 22111 13589999998 889
Q ss_pred HHHHHHHHcCceEeeccccHHHHHHHHhhcccccccCcChHHHHHHHHHH
Q 008150 122 FELVVKFCYGWKVDVTATNIAALYSAANFLEMSDDLDQGNLITKTEAFLS 171 (576)
Q Consensus 122 felv~~FcY~~~i~it~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~ 171 (576)
|+.+++|+|||++.++.+||..|+.||++|+|++ |++.|++||.
T Consensus 101 f~~lL~fiYtg~~~i~~~~v~~ll~~A~~l~i~~------L~~~C~~~L~ 144 (144)
T 2ppi_A 101 MREILDYIFSGQIRLNEDTIQDVVQAADLLLLTD------LKTLCCEFLE 144 (144)
T ss_dssp HHHHHHHHTTSCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHTTC-
T ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcHH------HHHHHHHHhC
Confidence 9999999999999999999999999999999996 9999999974
No 18
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.81 E-value=2.7e-20 Score=166.75 Aligned_cols=93 Identities=18% Similarity=0.225 Sum_probs=84.4
Q ss_pred hhcCCceeEEEEECCeEeeeccchhcccCHHHHHhhcccccCCCCCCCCeEEecCCCCcHHHHHHHHHHHcCceEeeccc
Q 008150 60 VRAKVASDLIVQIADSCFHLHKLAMVSKSEYLNRIVFKRRSNGEKENNPMIFISNFPGGIEIFELVVKFCYGWKVDVTAT 139 (576)
Q Consensus 60 ~~~~~~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~~~~~v~L~~~pgGae~felv~~FcY~~~i~it~~ 139 (576)
+.++.+|||+|.|+|+.|++||.+|+++|+||++ . ...|+|++++ +++|+.+++|+|||++.|+.+
T Consensus 25 r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~-------~-----~~~i~l~~v~--~~~f~~ll~fiYtg~~~i~~~ 90 (119)
T 3m5b_A 25 RLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR-------R-----GQWALGEGIS--PSTFAQLLNFVYGESVELQPG 90 (119)
T ss_dssp HHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC-------C-----EEEECCSSCC--HHHHHHHHHHHTTCCEEECGG
T ss_pred HhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc-------C-----CCEEEeCCCC--HHHHHHHHHHHcCCCcCcCHH
Confidence 4579999999999999999999999999999984 1 1378999998 899999999999999999999
Q ss_pred cHHHHHHHHhhcccccccCcChHHHHHHHHHHH
Q 008150 140 NIAALYSAANFLEMSDDLDQGNLITKTEAFLSF 172 (576)
Q Consensus 140 NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~ 172 (576)
||..|+.||++|||++ |++.|++++.+
T Consensus 91 ~v~~ll~aA~~l~i~~------l~~~C~~~~~~ 117 (119)
T 3m5b_A 91 ELRPLQEAARALGVQS------LEEACWRARGD 117 (119)
T ss_dssp GHHHHHHHHHHTTCHH------HHHHHHHHC--
T ss_pred HHHHHHHHHHHhCCHH------HHHHHHHHHhh
Confidence 9999999999999996 99999999875
No 19
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.76 E-value=1.2e-18 Score=178.52 Aligned_cols=130 Identities=16% Similarity=0.176 Sum_probs=111.1
Q ss_pred HhhcCCceeEEEEECCeEeeeccchhcccCHHHHHhhccc-ccCCCCCCCCeEEecCCCCcHHHHHHHHHHHcCceEeec
Q 008150 59 IVRAKVASDLIVQIADSCFHLHKLAMVSKSEYLNRIVFKR-RSNGEKENNPMIFISNFPGGIEIFELVVKFCYGWKVDVT 137 (576)
Q Consensus 59 ~~~~~~~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~-~e~~~~~~~~~v~L~~~pgGae~felv~~FcY~~~i~it 137 (576)
++.++..|||+|.|+|+.|++||.+|+++|+||++||.+. .|+. ..+|.|++++ +++|+.+++|+||+++.++
T Consensus 168 l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~----~~~i~l~~~~--~~~f~~~L~~iYt~~~~~~ 241 (312)
T 3hqi_A 168 LWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESK----KNRVEINDVE--PEVFKEMMCFIYTGKAPNL 241 (312)
T ss_dssp HHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC-----C----CSEEEECSSC--HHHHHHHHHHHHHSCCTTH
T ss_pred HHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCccccC----CceEEecCCC--HHHHHHHHHhhcCCCCCCh
Confidence 6678999999999999999999999999999999999875 3433 3589999998 8999999999999999999
Q ss_pred cccHHHHHHHHhhcccccccCcChHHHHHHHHHHHhhhcchhhHHHHHhccHhHHHHHHHhc---hhhhhhHHHH
Q 008150 138 ATNIAALYSAANFLEMSDDLDQGNLITKTEAFLSFSILSSWKDTFQILKSCESIQSWAKELH---ILKRCSEAIA 209 (576)
Q Consensus 138 ~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v~~sw~~~i~~L~sC~~L~~~Ae~l~---iv~rcidsLa 209 (576)
.+|+..|+.||++++|+. |...|+.||.+.+ ...+|..++.+|+.++ +.+.|++-|+
T Consensus 242 ~~~~~~ll~~A~~~~~~~------l~~~c~~~l~~~~---------~~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 301 (312)
T 3hqi_A 242 DKMADDLLAAADKYALER------LKVMCEDALCSNL---------SVENAAEILILADLHSADQLKTQAVDFIN 301 (312)
T ss_dssp HHHHHHHHHHHHHTTCHH------HHHHHHHHHHTTC---------CTTTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCHHH------HHHHHHHHHHccC---------CHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 999999999999999995 9999999999888 3468888888888875 4445555444
No 20
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.74 E-value=4.2e-18 Score=151.33 Aligned_cols=88 Identities=19% Similarity=0.283 Sum_probs=81.7
Q ss_pred HHhhcCCceeEEEEECCeEeeeccchhcccCHHHHHhhcccccCCCCCCCCeEEecCCCCcHHHHHHHHHHHcCceE-ee
Q 008150 58 WIVRAKVASDLIVQIADSCFHLHKLAMVSKSEYLNRIVFKRRSNGEKENNPMIFISNFPGGIEIFELVVKFCYGWKV-DV 136 (576)
Q Consensus 58 w~~~~~~~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~~~~~v~L~~~pgGae~felv~~FcY~~~i-~i 136 (576)
.++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. ...|.|++++ +++|+.+++|+|||++ .+
T Consensus 24 ~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~--------~~~i~l~~~~--~~~f~~~l~~~Ytg~~~~~ 93 (116)
T 3fkc_A 24 EQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA--------GQVVELSFIR--AEIFAEILNYIYSSKIVRV 93 (116)
T ss_dssp HHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC--------CSEEEECSSC--HHHHHHHHHHHTTSCCCSC
T ss_pred HHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC--------CCEEEeCCCC--HHHHHHHHHhhcCCCcCCC
Confidence 36788999999999999999999999999999999999764 1389999998 8999999999999999 79
Q ss_pred ccccHHHHHHHHhhccccc
Q 008150 137 TATNIAALYSAANFLEMSD 155 (576)
Q Consensus 137 t~~NV~~L~cAA~~LqMte 155 (576)
+.+||..++.||++|||+.
T Consensus 94 ~~~~~~~ll~~A~~l~i~~ 112 (116)
T 3fkc_A 94 RSDLLDELIKSGQLLGVKF 112 (116)
T ss_dssp CHHHHHHHHHHHHHHTCHH
T ss_pred CHHHHHHHHHHHHHhCccc
Confidence 9999999999999999985
No 21
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.33 E-value=1.4e-12 Score=122.53 Aligned_cols=95 Identities=18% Similarity=0.260 Sum_probs=81.9
Q ss_pred EEEEE-CCeEeeeccchhcccCHHHHHhhcc-c-c-cCCCCCCCCeEEecCCCCcHHHHHHHHHHHcCce----------
Q 008150 68 LIVQI-ADSCFHLHKLAMVSKSEYLNRIVFK-R-R-SNGEKENNPMIFISNFPGGIEIFELVVKFCYGWK---------- 133 (576)
Q Consensus 68 V~v~V-~~~~F~lHK~vLas~S~yfr~lf~~-~-~-e~~~~~~~~~v~L~~~pgGae~felv~~FcY~~~---------- 133 (576)
|+|+. +|+.|.+|+.+ |++|+||+.||.. + . ++. ...|.|++++ +.+++.|++|||+.+
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~----~~~Ipl~~V~--~~iL~kViey~~~h~~~~~~~~~~~ 75 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGD----DDPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDE 75 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS----------CEECTTSC--HHHHHHHHHHHHHTTTCCC------
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCccccc----CCCcCCCCcc--HHHHHHHHHHHHHcCcCCCCccccc
Confidence 67765 79999999998 9999999999986 3 2 222 2479999998 679999999999987
Q ss_pred ----------------EeeccccHHHHHHHHhhcccccccCcChHHHHHHHHHHHhhh
Q 008150 134 ----------------VDVTATNIAALYSAANFLEMSDDLDQGNLITKTEAFLSFSIL 175 (576)
Q Consensus 134 ----------------i~it~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v~ 175 (576)
+.++.+|+..|+.||.||+|.. |+..|+.|+...+.
T Consensus 76 ~~~~~~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~------Lld~~c~~va~~i~ 127 (159)
T 2ast_A 76 NKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKG------LLDVTCKTVANMIK 127 (159)
T ss_dssp -----CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHH------HHHHHHHHHHHHHS
T ss_pred ccccchhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHH------HHHHHHHHHHHHHc
Confidence 8899999999999999999996 99999999999883
No 22
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.12 E-value=9.7e-11 Score=101.16 Aligned_cols=79 Identities=14% Similarity=0.169 Sum_probs=65.3
Q ss_pred EEEEE-CCeEeeeccchhcccCHHHHHhhccc---ccCCCCCCCCeEEecCCCCcHHHHHHHHHHHc-----C---ceEe
Q 008150 68 LIVQI-ADSCFHLHKLAMVSKSEYLNRIVFKR---RSNGEKENNPMIFISNFPGGIEIFELVVKFCY-----G---WKVD 135 (576)
Q Consensus 68 V~v~V-~~~~F~lHK~vLas~S~yfr~lf~~~---~e~~~~~~~~~v~L~~~pgGae~felv~~FcY-----~---~~i~ 135 (576)
|+++- +|+.|.+||.+ |++|+||+.||+.. .|+. ...|.|++++ +.+++.+++||| + +.|.
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~----~~~I~l~~V~--~~iL~kViey~~~h~~~~~~~~~i~ 76 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENE----TNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIP 76 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC------------CEEECTTSC--HHHHHHHHHHHHHHHHHTTCCSCCC
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccccC----CCceECCCCC--HHHHHHHHHHHHHhcccCCCcCCCC
Confidence 45554 78999999999 99999999999863 2222 3489999998 679999999999 5 6777
Q ss_pred ---eccccHHHHHHHHhhccc
Q 008150 136 ---VTATNIAALYSAANFLEM 153 (576)
Q Consensus 136 ---it~~NV~~L~cAA~~LqM 153 (576)
|+++|+..|+.||+||+.
T Consensus 77 ~~~i~~~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 77 EFPIAPEIALELLMAANFLDC 97 (97)
T ss_dssp CCCCCGGGHHHHHHHHHHHTC
T ss_pred cCcCCHHHHHHHHHHHhhhCC
Confidence 999999999999999973
No 23
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.01 E-value=4.2e-10 Score=103.68 Aligned_cols=92 Identities=18% Similarity=0.238 Sum_probs=80.8
Q ss_pred EEEEE-CCeEeeeccchhcccCHHHHHhhcccccCCCCCCCCeEEecCCCCcHHHHHHHHHHHcCce-------------
Q 008150 68 LIVQI-ADSCFHLHKLAMVSKSEYLNRIVFKRRSNGEKENNPMIFISNFPGGIEIFELVVKFCYGWK------------- 133 (576)
Q Consensus 68 V~v~V-~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~~~~~v~L~~~pgGae~felv~~FcY~~~------------- 133 (576)
|+++. +|+.|.+|+.+ |.+|+||+.|+.... . ..|.|++++ +.+++.|++|||..+
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~--~-----~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~~~~~~ 73 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG--M-----DPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKE 73 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC--C-----SSEECTTCC--HHHHHHHHHHHHHHTTCC----------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC--C-----CceecCCcC--HHHHHHHHHHHHHhccCCCccccccccc
Confidence 67776 78999999998 899999999997632 1 279999998 679999999999865
Q ss_pred -------------EeeccccHHHHHHHHhhcccccccCcChHHHHHHHHHHHhhh
Q 008150 134 -------------VDVTATNIAALYSAANFLEMSDDLDQGNLITKTEAFLSFSIL 175 (576)
Q Consensus 134 -------------i~it~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v~ 175 (576)
+.++.+++..|+.||+||+|.. |+..|+.|+...+-
T Consensus 74 ~~~~~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~------Lldl~c~~vA~~ik 122 (141)
T 1fs1_B 74 KRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKG------LLDVTCKTVANMIK 122 (141)
T ss_dssp -------HHHHHHTCSCHHHHHHHHHHHHHHTCHH------HHHHHHHHHHHHHT
T ss_pred cchhhhhHHHHHHHhCCHHHHHHHHHHHHHHhhhH------HHHHHHHHHHHHHc
Confidence 7789999999999999999995 99999999998773
No 24
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.90 E-value=2.5e-10 Score=107.32 Aligned_cols=92 Identities=16% Similarity=0.294 Sum_probs=51.1
Q ss_pred EEEEE-CCeEeeeccchhcccCHHHHHhhcccccCCCCCCCCeEEecCCCCcHHHHHHHHHHHcCce-------------
Q 008150 68 LIVQI-ADSCFHLHKLAMVSKSEYLNRIVFKRRSNGEKENNPMIFISNFPGGIEIFELVVKFCYGWK------------- 133 (576)
Q Consensus 68 V~v~V-~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~~~~~v~L~~~pgGae~felv~~FcY~~~------------- 133 (576)
|+|+. +|+.|.+|+.+ |.+|+||+.||..... ...|.|++++ +.+++.|++|||..+
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~~------~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~~~~~~ 76 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDCV------DNGVPLPNVT--SKILAKVIEYCKRHVEAAASKAEAVEGA 76 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC------------------CCTTSC--HHHHHHHHHC------------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccCC------CCceeCCcCc--HHHHHHHHHHHHHcccCCCccccccccc
Confidence 66664 79999999998 8999999999976421 1378999998 679999999999975
Q ss_pred --------------EeeccccHHHHHHHHhhcccccccCcChHHHHHHHHHHHhh
Q 008150 134 --------------VDVTATNIAALYSAANFLEMSDDLDQGNLITKTEAFLSFSI 174 (576)
Q Consensus 134 --------------i~it~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v 174 (576)
+.++..++..|+.||.||+|.. |+..|+.|+...+
T Consensus 77 ~~~~~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~------Lldl~c~~vA~~i 125 (160)
T 2p1m_A 77 ATSDDDLKAWDADFMKIDQATLFELILAANYLNIKN------LLDLTCQTVADMI 125 (160)
T ss_dssp ------------------------CHHHHHHTTCHH------HHHHHHHHHHHTT
T ss_pred ccccchhhHHHHHHHcCCHHHHHHHHHHHHHHhHHH------HHHHHHHHHHHHH
Confidence 5789999999999999999995 9999999999887
No 25
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.27 E-value=1.4e-06 Score=75.55 Aligned_cols=80 Identities=16% Similarity=0.164 Sum_probs=65.8
Q ss_pred eEEEEE-CCeEeeeccchhcccCHHHHHhhcccccCCCCCCCCeEEecCCCCcHHHHHHHHHHHcCce------------
Q 008150 67 DLIVQI-ADSCFHLHKLAMVSKSEYLNRIVFKRRSNGEKENNPMIFISNFPGGIEIFELVVKFCYGWK------------ 133 (576)
Q Consensus 67 DV~v~V-~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~~~~~v~L~~~pgGae~felv~~FcY~~~------------ 133 (576)
-|+++- +|+.|.+|+.+ |..|++|+.|+..+.+.. ...|.|++++ +.+++.|++|||.-+
T Consensus 5 ~v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~e~~----~~~Iplp~V~--~~iL~kVieyc~~h~~~~~~~~~~~~i 77 (99)
T 1hv2_A 5 FVTLVSKDDKEYEISRSA-AMISPTLKAMIEGPFRES----KGRIELKQFD--SHILEKAVEYLNYNLKYSGVSEDDDEI 77 (99)
T ss_dssp EEEEEETTTEEEEEEHHH-HTTCHHHHHHHHSSTTTC----TTEEEETTSC--HHHHHHHHHHHHHHHHHHHHCSSCSSC
T ss_pred EEEEEecCCCEEEECHHH-HHHhHHHHHHHhcccccC----CCceecCCcC--HHHHHHHHHHHHHhcccCCCccccccC
Confidence 366766 89999999996 899999999997632221 2479999998 679999999999633
Q ss_pred --EeeccccHHHHHHHHhhccc
Q 008150 134 --VDVTATNIAALYSAANFLEM 153 (576)
Q Consensus 134 --i~it~~NV~~L~cAA~~LqM 153 (576)
..+..+++..|+.||+||++
T Consensus 78 ~~w~vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 78 PEFEIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp CCCCCCHHHHHHHHHHHHHHCC
T ss_pred CCccCCHHHHHHHHHHHHHhCc
Confidence 36788899999999999985
No 26
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.23 E-value=1.5e-06 Score=74.93 Aligned_cols=79 Identities=14% Similarity=0.141 Sum_probs=64.0
Q ss_pred EEEEE-CCeEeeeccchhcccCHHHHHhhccc-c--cCCCCCCCCeEEecCCCCcHHHHHHHHHHHcCce----------
Q 008150 68 LIVQI-ADSCFHLHKLAMVSKSEYLNRIVFKR-R--SNGEKENNPMIFISNFPGGIEIFELVVKFCYGWK---------- 133 (576)
Q Consensus 68 V~v~V-~~~~F~lHK~vLas~S~yfr~lf~~~-~--e~~~~~~~~~v~L~~~pgGae~felv~~FcY~~~---------- 133 (576)
|+++- +|+.|.+|+.+ |..|++|+.|+... . |+. ...|.|++++ +.+++.+++|||.-+
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~----~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~i~ 75 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENE----TNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIP 75 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC------------CEEECSSCC--HHHHHHHHHHHHHHHHHHSCCSCCC
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCccccc----CCceeCCCCC--HHHHHHHHHHHHHccccCCCcccCC
Confidence 56665 78999999996 89999999999763 1 221 2479999998 679999999999633
Q ss_pred -EeeccccHHHHHHHHhhccc
Q 008150 134 -VDVTATNIAALYSAANFLEM 153 (576)
Q Consensus 134 -i~it~~NV~~L~cAA~~LqM 153 (576)
..+..+++..|+.||+||++
T Consensus 76 ~w~vd~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 76 EFPIAPEIALELLMAANFLDC 96 (96)
T ss_dssp CCCCCTTTHHHHHHHHHHHTC
T ss_pred CcccCHHHHHHHHHHHHHhCc
Confidence 46888999999999999985
No 27
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.08 E-value=5.4e-06 Score=78.56 Aligned_cols=99 Identities=14% Similarity=0.250 Sum_probs=76.0
Q ss_pred eEEEEE-CCeEeeeccchhcccCHHHHHhhccccc-CCCCCCCCeEEecCCCCcHHHHHHHHHHHcCce-----------
Q 008150 67 DLIVQI-ADSCFHLHKLAMVSKSEYLNRIVFKRRS-NGEKENNPMIFISNFPGGIEIFELVVKFCYGWK----------- 133 (576)
Q Consensus 67 DV~v~V-~~~~F~lHK~vLas~S~yfr~lf~~~~e-~~~~~~~~~v~L~~~pgGae~felv~~FcY~~~----------- 133 (576)
-|+|+- +|+.|.+++.+ |..|++++.|+..... .........|.|++++ +.+++.|++|||--+
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~~~~ 84 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVR--SSVLQKVIEWAEHHRDSNFPDEDDDD 84 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCC--HHHHHHHHHHHHHTTTCCCCC-----
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCC--HHHHHHHHHHHHHcccCCCccccccc
Confidence 466655 68999999997 7889999999975321 0000002479999998 679999999998632
Q ss_pred --------------EeeccccHHHHHHHHhhcccccccCcChHHHHHHHHHHHhh
Q 008150 134 --------------VDVTATNIAALYSAANFLEMSDDLDQGNLITKTEAFLSFSI 174 (576)
Q Consensus 134 --------------i~it~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v 174 (576)
+.+....+..|+.||.||+|.. |+..|+.++...+
T Consensus 85 ~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~------Lldl~c~~vA~~i 133 (169)
T 3v7d_A 85 SRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKP------LLDAGCKVVAEMI 133 (169)
T ss_dssp ---CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHH------HHHHHHHHHHHHH
T ss_pred ccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHHH
Confidence 3567788999999999999995 9999999987766
No 28
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=97.61 E-value=5.6e-05 Score=66.97 Aligned_cols=83 Identities=13% Similarity=0.110 Sum_probs=63.3
Q ss_pred eEEEE-ECCeEeeeccchhcccCHHHHHhhcccccCCCCCCCCeEEecCCCCcHHHHHHHHHHHcCce-----------E
Q 008150 67 DLIVQ-IADSCFHLHKLAMVSKSEYLNRIVFKRRSNGEKENNPMIFISNFPGGIEIFELVVKFCYGWK-----------V 134 (576)
Q Consensus 67 DV~v~-V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~~~~~v~L~~~pgGae~felv~~FcY~~~-----------i 134 (576)
-|+++ -+|..|.+++. .|..|+.++.|+.......+. ....|.|++++ +.+++.|++|||--+ .
T Consensus 18 ~v~L~SsDG~~F~V~~~-~A~~S~tIk~ml~~~~~~~e~-~~~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~i~~w 93 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKRE-HALTSGTIKAMLSGPGQFAEN-ETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEF 93 (112)
T ss_dssp EEEEECTTSCEEEEEHH-HHHTSHHHHHHSSCC---------CEEECSSCC--HHHHHHHHHHHHHHHHHSSCSSCCCCC
T ss_pred EEEEEcCCCCEEEECHH-HHHHhHHHHHHHHhcCCcccc-cCCceeCCCCC--HHHHHHHHHHHHHhhhccCCcCCCCCc
Confidence 35666 47899999999 578999999999753110010 02479999998 679999999998532 3
Q ss_pred eeccccHHHHHHHHhhccc
Q 008150 135 DVTATNIAALYSAANFLEM 153 (576)
Q Consensus 135 ~it~~NV~~L~cAA~~LqM 153 (576)
.+..+++..|+.||+||++
T Consensus 94 ~vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 94 PIAPEIALELLMAANFLDC 112 (112)
T ss_dssp CCCHHHHHHHHHHHHHHTC
T ss_pred ccCHHHHHHHHHHHHHhCc
Confidence 6888999999999999986
No 29
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=97.42 E-value=0.00041 Score=60.60 Aligned_cols=95 Identities=12% Similarity=0.204 Sum_probs=71.5
Q ss_pred eEEEEECCeEeeeccchhcccC-HHHHHhhccccc--CCCCCCCCeEEecCCCCcHHHHHHHHHHHcCceEeecc-ccHH
Q 008150 67 DLIVQIADSCFHLHKLAMVSKS-EYLNRIVFKRRS--NGEKENNPMIFISNFPGGIEIFELVVKFCYGWKVDVTA-TNIA 142 (576)
Q Consensus 67 DV~v~V~~~~F~lHK~vLas~S-~yfr~lf~~~~e--~~~~~~~~~v~L~~~pgGae~felv~~FcY~~~i~it~-~NV~ 142 (576)
=|+|.|||+.|...+..|.... .+|.+||....+ ... ....++-+ |-+ |+.|+.|++|..+|++.+.. -.+.
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~-d~~~~~fi-DRd--p~~F~~IL~~lr~g~l~~p~~~~~~ 82 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDK-DETGAYLI-DRD--PTYFGPVLNYLRHGKLVINKDLAEE 82 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGB-CTTSCEEE-CSC--HHHHHHHHHHHHHSCCCCCTTSCHH
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCC-CCCceEEe-cCC--hHHHHHHHHHhCCCeeCCCCCCCHH
Confidence 4788999999999999999875 478999875311 000 01235555 444 78999999999999988744 3457
Q ss_pred HHHHHHhhcccccccCcChHHHHHHHHHH
Q 008150 143 ALYSAANFLEMSDDLDQGNLITKTEAFLS 171 (576)
Q Consensus 143 ~L~cAA~~LqMte~~~~~NL~~~ce~FL~ 171 (576)
.++..|+|.++++ |++.|++-+.
T Consensus 83 ~l~~Ea~fy~l~~------L~~~l~~~i~ 105 (107)
T 3drz_A 83 GVLEEAEFYNITS------LIKLVKDKIR 105 (107)
T ss_dssp HHHHHHHHHTCHH------HHHHHHHHHH
T ss_pred HHHHHHHHCCCHH------HHHHHHHHHh
Confidence 8999999999996 8888877554
No 30
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.73 E-value=0.00056 Score=59.29 Aligned_cols=88 Identities=14% Similarity=0.044 Sum_probs=62.2
Q ss_pred HhccHhHHHHHHHhchhhhhhHHHHHHhccCCCCccccCCCCcccccccccccccccCCCcceecccccCChhHHHHHHH
Q 008150 185 LKSCESIQSWAKELHILKRCSEAIALKASINKKGFTFHDGDAQGALANNVEDWEKEGRADSWWFEDVSSLRIDHFIEVIN 264 (576)
Q Consensus 185 L~sC~~L~~~Ae~l~iv~rcidsLa~kA~~~~~~f~~~~~~~~~~l~~~~~~~~~~~~~~dWW~EDl~~L~~d~f~rvI~ 264 (576)
..||.+++.+|+.+++ ..|..+|.. |. . ++|....-.++|..||.+.+..+|+
T Consensus 10 ~~NCl~i~~~A~~~~~-----~~L~~~a~~----fi---------~---------~nF~~v~~~~eFl~L~~~~L~~lL~ 62 (105)
T 2eqx_A 10 VGNCLQVMWLADRHSD-----PELYTAAKH----CA---------K---------THLAQLQNTEEFLHLPHRLLTDIIS 62 (105)
T ss_dssp TTTHHHHHHHHHHTTC-----HHHHHHHHH----HH---------H---------HTCHHHHTSHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCC-----HHHHHHHHH----HH---------H---------HHHHHHHhcccHhhCCHHHHHHHHc
Confidence 4689999999999887 566555532 21 0 0111222368999999999888888
Q ss_pred HhhhcCCChhHHHHHHHHHHhhhhcccccCCCCCCcchhhhHHHHHHHHHH
Q 008150 265 SIKRKGITSELVGSCIAKWTSKWLSQITSGLNNVTPKQLTHQLRRVTTESL 315 (576)
Q Consensus 265 am~~~gl~~e~I~~aL~~Yakk~L~~~~~g~~~~~~~~~r~~~~r~LLE~I 315 (576)
.. ..+|+.|++++++|++++.. . |..+...|+++|
T Consensus 63 sd---v~~E~~vf~av~~Wv~~d~~------------~-R~~~~~~Ll~~V 97 (105)
T 2eqx_A 63 DG---VPCSQNPTEAIEAWINFNKE------------E-REAFAESLRTSL 97 (105)
T ss_dssp TC---EETTSCHHHHHHHHHHTTHH------------H-HHHHHHHHHHHC
T ss_pred CC---CCCHHHHHHHHHHHHHcCHH------------H-HHHHHHHHHHHH
Confidence 73 44778899999999988765 1 556677888885
No 31
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=95.43 E-value=0.035 Score=53.90 Aligned_cols=97 Identities=12% Similarity=0.208 Sum_probs=70.1
Q ss_pred eEEEEECCeEeeeccchhcccC-HHHHHhhccccc-CCCCCCCCeEEecCCCCcHHHHHHHHHHHcCceEeecc-ccHHH
Q 008150 67 DLIVQIADSCFHLHKLAMVSKS-EYLNRIVFKRRS-NGEKENNPMIFISNFPGGIEIFELVVKFCYGWKVDVTA-TNIAA 143 (576)
Q Consensus 67 DV~v~V~~~~F~lHK~vLas~S-~yfr~lf~~~~e-~~~~~~~~~v~L~~~pgGae~felv~~FcY~~~i~it~-~NV~~ 143 (576)
=|+|.|||..|...+.-|.... .+|.+||....+ ....+...++-| |-+ |..|+.|++|.-+|++.+.. -.+..
T Consensus 13 ~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI-DRD--P~~F~~ILnyLRtG~L~lP~~~~~~~ 89 (202)
T 3drx_A 13 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRD--PTYFGPVLNYLRHGKLVINKDLAEEG 89 (202)
T ss_dssp EEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE-CSC--STTHHHHHHHHHHSCCCCCTTSCHHH
T ss_pred EEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe-cCC--hHHHHHHHHHhcCCccCCCCCCCHHH
Confidence 4678999999999999998765 488999865311 000001235555 333 56999999999999998743 34478
Q ss_pred HHHHHhhcccccccCcChHHHHHHHHHHH
Q 008150 144 LYSAANFLEMSDDLDQGNLITKTEAFLSF 172 (576)
Q Consensus 144 L~cAA~~LqMte~~~~~NL~~~ce~FL~~ 172 (576)
++.-|+|+++++ |+..|+.-+.+
T Consensus 90 l~eEA~FygL~~------Lv~~l~~~i~e 112 (202)
T 3drx_A 90 VLEEAEFYNITS------LIKLVKDKIRE 112 (202)
T ss_dssp HHHHHHHTTCHH------HHHHHHHHHHH
T ss_pred HHHHHHHCCcHH------HHHHHHHHHHH
Confidence 999999999996 88887776654
No 32
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=92.97 E-value=0.054 Score=47.93 Aligned_cols=84 Identities=10% Similarity=0.098 Sum_probs=61.2
Q ss_pred EEEEECCeEeeeccchhcccCH-HHHHhhcccccCCCCCCCCeEEecCCCCcHHHHHHHHHHHcCceEeecc-ccHHHHH
Q 008150 68 LIVQIADSCFHLHKLAMVSKSE-YLNRIVFKRRSNGEKENNPMIFISNFPGGIEIFELVVKFCYGWKVDVTA-TNIAALY 145 (576)
Q Consensus 68 V~v~V~~~~F~lHK~vLas~S~-yfr~lf~~~~e~~~~~~~~~v~L~~~pgGae~felv~~FcY~~~i~it~-~NV~~L~ 145 (576)
|+|.|||+.|...+..|....+ +|.+|+.....-. ....++-+. =+ |..|..|++|.-+|++.+.. -.+..++
T Consensus 7 V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~--~~~g~~FiD-Rd--p~~F~~ILnylR~G~l~~p~~~~~~~~~ 81 (115)
T 3kvt_A 7 VIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYD--PVLNEYFFD-RH--PGVFAQIINYYRSGKLHYPTDVCGPLFE 81 (115)
T ss_dssp EEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEE--TTTTEEEEC-SC--TTTHHHHHHHHHHSCBCCCSSSCHHHHH
T ss_pred EEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCC--CCCCcEEEe-cC--hHHHHHHHHHhcCCCCCCCCcccHHHHH
Confidence 7889999999999999987633 4566665421000 012356653 33 56999999999999998755 3578999
Q ss_pred HHHhhcccccc
Q 008150 146 SAANFLEMSDD 156 (576)
Q Consensus 146 cAA~~LqMte~ 156 (576)
.-|+|.++++.
T Consensus 82 ~Ea~fy~i~~~ 92 (115)
T 3kvt_A 82 EELEFWGLDSN 92 (115)
T ss_dssp HHHHHHTCCGG
T ss_pred HHHHHhCCChH
Confidence 99999999984
No 33
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=92.79 E-value=0.13 Score=46.07 Aligned_cols=85 Identities=13% Similarity=0.176 Sum_probs=57.7
Q ss_pred eeEEEEECCeEeeeccchhcccCHHHHHhhccc-ccCCCCCCCCeEEecCCCCcHHHHHHHHHHHcCceEeecc-ccHHH
Q 008150 66 SDLIVQIADSCFHLHKLAMVSKSEYLNRIVFKR-RSNGEKENNPMIFISNFPGGIEIFELVVKFCYGWKVDVTA-TNIAA 143 (576)
Q Consensus 66 ~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~-~e~~~~~~~~~v~L~~~pgGae~felv~~FcY~~~i~it~-~NV~~ 143 (576)
.=|+|.|||..|..-+..|...-+- |+... +..........+-| +-.+..|+.|++|.-+|++.+.. -.+..
T Consensus 13 ~~V~LNVGG~~F~t~~~TL~~~p~S---~L~~~~~~~~~~~~~g~~Fi---DRdp~~F~~ILnflR~G~l~~p~~~~~~~ 86 (124)
T 1s1g_A 13 ELIVLNVSGRRFQTWRTTLERYPDT---LLGSTEKEFFFNEDTKEYFF---DRDPEVFRCVLNFYRTGKLHYPRYECISA 86 (124)
T ss_dssp CEEEEEETTEEEEEEHHHHTTSTTS---STTSSGGGGTBCSSSCSEEE---CSCHHHHHHHHHHHHHSCBCCCTTSCHHH
T ss_pred CEEEEEeCCEEEEEeHHHHhcCCCc---eecccCCcccccCCCCcEEE---cCChHHHHHHHHHHhcCCCCCCCCcCHHH
Confidence 3478899999999998888654321 22221 10000001235555 23478999999999999988644 35789
Q ss_pred HHHHHhhcccccc
Q 008150 144 LYSAANFLEMSDD 156 (576)
Q Consensus 144 L~cAA~~LqMte~ 156 (576)
++.-|+|+++++.
T Consensus 87 l~~Ea~fy~i~~l 99 (124)
T 1s1g_A 87 YDDELAFYGILPE 99 (124)
T ss_dssp HHHHHHHTTCCGG
T ss_pred HHHHHHHcCCChH
Confidence 9999999999974
No 34
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=90.36 E-value=0.16 Score=46.51 Aligned_cols=86 Identities=13% Similarity=0.177 Sum_probs=58.6
Q ss_pred ceeEEEEECCeEeeeccchhcccCHHHHHhhccc-ccCCCCCCCCeEEecCCCCcHHHHHHHHHHHcCceEeecc-ccHH
Q 008150 65 ASDLIVQIADSCFHLHKLAMVSKSEYLNRIVFKR-RSNGEKENNPMIFISNFPGGIEIFELVVKFCYGWKVDVTA-TNIA 142 (576)
Q Consensus 65 ~~DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~-~e~~~~~~~~~v~L~~~pgGae~felv~~FcY~~~i~it~-~NV~ 142 (576)
..=|+|.|||+.|...+.-|...-+- |+... +.........++-|. -.+..|+.|++|.-+|++.+.. -.+.
T Consensus 34 ~~~V~LNVGG~~F~T~~~TL~~~P~S---~L~~~~~~~~~~~~~g~yFiD---Rdp~~F~~ILnflR~G~l~~p~~~~~~ 107 (140)
T 2nz0_B 34 DELIVLNVSGRRFQTWRTTLERYPDT---LLGSTEKEFFFNEDTKEYFFD---RDPEVFRCVLNFYRTGKLHYPRYECIS 107 (140)
T ss_dssp CCEEEEEETTEEEEEEHHHHHTCTTS---TTTSGGGGGSEETTTTEEEEC---SCHHHHHHHHHHHHHSSBCCCTTSCHH
T ss_pred CCEEEEEECCEEEEeeHHHHhcCCCe---eecccCCcccccCCCCeEEEe---CCcHHHHHHHHHHhcCCcCCCCCcCHH
Confidence 44578899999999999888654321 22221 100000012356552 3478999999999999988744 3579
Q ss_pred HHHHHHhhcccccc
Q 008150 143 ALYSAANFLEMSDD 156 (576)
Q Consensus 143 ~L~cAA~~LqMte~ 156 (576)
.++.-|+|+++++.
T Consensus 108 ~l~eEa~fy~i~~l 121 (140)
T 2nz0_B 108 AYDDELAFYGILPE 121 (140)
T ss_dssp HHHHHHHHHTCCGG
T ss_pred HHHHHHHHcCCChH
Confidence 99999999999974
No 35
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=88.56 E-value=0.27 Score=42.55 Aligned_cols=83 Identities=12% Similarity=0.183 Sum_probs=56.1
Q ss_pred EEEEECCeEeeeccchhcccCHHHHHhhccc-ccCCCCCCCCeEEecCCCCcHHHHHHHHHHHcCceEeecc-ccHHHHH
Q 008150 68 LIVQIADSCFHLHKLAMVSKSEYLNRIVFKR-RSNGEKENNPMIFISNFPGGIEIFELVVKFCYGWKVDVTA-TNIAALY 145 (576)
Q Consensus 68 V~v~V~~~~F~lHK~vLas~S~yfr~lf~~~-~e~~~~~~~~~v~L~~~pgGae~felv~~FcY~~~i~it~-~NV~~L~ 145 (576)
|+|.|||+.|...+..|....+- |+... +..........+-+. =+ |+.|+.|++|.-+|++.+.. -.+..++
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~s---~L~~~~~~~~~~~~~~~~FiD-Rd--p~~F~~ILnflR~g~l~~p~~~~~~~l~ 75 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPDT---LLGSSERDFFYHPETQQYFFD-RD--PDIFRHILNFYRTGKLHYPRHECISAYD 75 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCSS---STTSGGGGGGEEGGGTEEEEC-SC--TTTHHHHHHHHHHSCBCCCTTSCHHHHH
T ss_pred EEEEECCEEEEEeHHHHhcCCCc---cccccCCcccccCCCCcEEEe-CC--cHHHHHHHHHHhcCCCCCCCCcCHHHHH
Confidence 78999999999999888654321 22221 100000001355553 23 56999999999999987644 3578999
Q ss_pred HHHhhcccccc
Q 008150 146 SAANFLEMSDD 156 (576)
Q Consensus 146 cAA~~LqMte~ 156 (576)
.-|+|.++++.
T Consensus 76 ~Ea~fy~i~~l 86 (105)
T 1nn7_A 76 EELAFFGLIPE 86 (105)
T ss_dssp HHHHHHTCCSC
T ss_pred HHHHHcCCCHH
Confidence 99999999974
No 36
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=87.59 E-value=0.89 Score=39.06 Aligned_cols=82 Identities=10% Similarity=0.174 Sum_probs=57.2
Q ss_pred EEEEECCeEeeeccchhcccC-HHHHHhhcccc--cCCCCCCCCeEEecCCCCcHHHHHHHHHHHcC-ceEeecc-ccHH
Q 008150 68 LIVQIADSCFHLHKLAMVSKS-EYLNRIVFKRR--SNGEKENNPMIFISNFPGGIEIFELVVKFCYG-WKVDVTA-TNIA 142 (576)
Q Consensus 68 V~v~V~~~~F~lHK~vLas~S-~yfr~lf~~~~--e~~~~~~~~~v~L~~~pgGae~felv~~FcY~-~~i~it~-~NV~ 142 (576)
|+|.|||+.|...+.-|...- ..+.+|+.... ... ..++-+. =+ |..|+.|++|.-+ |++.+.. -.+.
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~----~~eyFiD-Rd--p~~F~~ILnflR~~G~l~~p~~~~~~ 75 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPL----RNEYFFD-RN--RPSFDAILYFYQSGGRLRRPVNVPLD 75 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETT----TTEEEEC-SC--STTHHHHHHHHHTTSCCCCCTTSCHH
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccccCCC----ceeEEEc-CC--hHHHHHHHHHHhcCCcccCCCCCCHH
Confidence 689999999999998886542 13444443211 111 2366663 23 5699999999998 8987633 3578
Q ss_pred HHHHHHhhcccccc
Q 008150 143 ALYSAANFLEMSDD 156 (576)
Q Consensus 143 ~L~cAA~~LqMte~ 156 (576)
.++.-|+|.++++.
T Consensus 76 ~~~~Ea~fy~i~~~ 89 (100)
T 1t1d_A 76 VFSEEIKFYELGEN 89 (100)
T ss_dssp HHHHHHHHTTCCHH
T ss_pred HHHHHHHHcCCCHH
Confidence 89999999999973
No 37
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=85.93 E-value=1.2 Score=34.03 Aligned_cols=34 Identities=18% Similarity=0.341 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008150 541 HKEIKVMKKEVETMKMQLNQLQMCKTQLQNQVKS 574 (576)
Q Consensus 541 ~~e~~~lr~e~~~m~~r~~ele~~~~~m~~~~~~ 574 (576)
.-|.+.||.|++.+|.++.+|.++..++++.+.+
T Consensus 18 ~~d~eaLk~E~~eLk~k~~~L~~~~~el~~~l~~ 51 (53)
T 2yy0_A 18 NPEIELLRLELAEMKEKYEAIVEENKKLKAKLAQ 51 (53)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3578899999999999999999999999988875
No 38
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=80.16 E-value=3.8 Score=30.93 Aligned_cols=36 Identities=17% Similarity=0.266 Sum_probs=32.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008150 539 SSHKEIKVMKKEVETMKMQLNQLQMCKTQLQNQVKS 574 (576)
Q Consensus 539 ~~~~e~~~lr~e~~~m~~r~~ele~~~~~m~~~~~~ 574 (576)
.+..||-.||.|++.=-.+++.||.|-+.||..++.
T Consensus 14 ~Lk~ENshLrrEL~dNS~~lskLE~ets~mKevlk~ 49 (54)
T 1deb_A 14 ALKMENSNLRQELEDNSNHLTKLETEASNMKEVLKQ 49 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHhhHHHHHHHHhhhhhHHHHHHH
Confidence 457899999999999999999999999999988764
No 39
>1pd7_B MAD1; PAH2, SIN3, eukaryotic transcriptional regulation, protein-protein interactions; NMR {Mus musculus}
Probab=70.20 E-value=1.3 Score=28.83 Aligned_cols=16 Identities=44% Similarity=0.590 Sum_probs=14.1
Q ss_pred ccHHHHHHHHhhcccc
Q 008150 139 TNIAALYSAANFLEMS 154 (576)
Q Consensus 139 ~NV~~L~cAA~~LqMt 154 (576)
.||+.|+.||+||+=-
T Consensus 3 ~nvq~LLeAAeyLErr 18 (26)
T 1pd7_B 3 MNIQMLLEAADYLERR 18 (26)
T ss_dssp CSTHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH
Confidence 5999999999999844
No 40
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=58.69 E-value=16 Score=27.30 Aligned_cols=34 Identities=9% Similarity=0.251 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 008150 542 KEIKVMKKEVETMKMQLNQLQMCKTQLQNQVKSW 575 (576)
Q Consensus 542 ~e~~~lr~e~~~m~~r~~ele~~~~~m~~~~~~~ 575 (576)
+.+-.||.-.+.+=+||.+||..|.++.+++...
T Consensus 4 q~l~kLKe~n~~L~~kv~~Le~~c~~~eQEieRL 37 (48)
T 3vmx_A 4 RQILRLKQINIQLATKIQHLEFSCSEKEQEIERL 37 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 4567788888999999999999999999987653
No 41
>1vjh_A BET V I allergen family; structural genomics, center for eukaryotic structural genomics, protein structure initiative, CESG, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.129.3.1 PDB: 2q3q_A
Probab=52.70 E-value=10 Score=33.21 Aligned_cols=33 Identities=3% Similarity=-0.057 Sum_probs=25.6
Q ss_pred hhcCCCCCChhHHHHHHHHcCCCccccchhhHHHHHHHHHhCCC
Q 008150 416 LIARDKNLAAKRFQLLAEALPKSARVCDDNLYRAMDIYLKAHPD 459 (576)
Q Consensus 416 EiA~D~~L~~~kF~~Lae~lP~~aR~~~DgLYrAIDiYLk~Hp~ 459 (576)
|...|.+.+|.+..+.+ .++++|||-||-+||.
T Consensus 90 e~~~~~~~~p~~~~~~~-----------~~~~k~ie~yll~~p~ 122 (122)
T 1vjh_A 90 EKVHKDIDDPHSIIDES-----------VKYFKKLDEAILNFKE 122 (122)
T ss_dssp EESSTTSCCSHHHHHHH-----------HHHHHHHHHHHHHC--
T ss_pred EECCCCCCCHHHHHHHH-----------HHHHHHHHHHHhhCCC
Confidence 45667888888886655 6889999999999994
No 42
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=48.85 E-value=34 Score=26.66 Aligned_cols=35 Identities=20% Similarity=0.235 Sum_probs=28.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008150 539 SSHKEIKVMKKEVETMKMQLNQLQMCKTQLQNQVK 573 (576)
Q Consensus 539 ~~~~e~~~lr~e~~~m~~r~~ele~~~~~m~~~~~ 573 (576)
.+..+.+.|+.+-+.++.++..|++|...++..|.
T Consensus 27 ~le~~~~~L~~~N~~L~~~i~~L~~E~~~Lk~ll~ 61 (63)
T 1ci6_A 27 ALTGECKELEKKNEALKERADSLAKEIQYLKDLIE 61 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45677888888888899999999999888887764
No 43
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=46.24 E-value=23 Score=26.87 Aligned_cols=29 Identities=17% Similarity=0.079 Sum_probs=25.7
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008150 537 RMSSHKEIKVMKKEVETMKMQLNQLQMCK 565 (576)
Q Consensus 537 ~~~~~~e~~~lr~e~~~m~~r~~ele~~~ 565 (576)
...+++||.+||..++.++.++.||.+..
T Consensus 21 ~eaLk~E~~eLk~k~~~L~~~~~el~~~l 49 (53)
T 2yy0_A 21 IELLRLELAEMKEKYEAIVEENKKLKAKL 49 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44679999999999999999999998764
No 44
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=37.92 E-value=53 Score=27.17 Aligned_cols=34 Identities=12% Similarity=0.239 Sum_probs=26.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008150 540 SHKEIKVMKKEVETMKMQLNQLQMCKTQLQNQVK 573 (576)
Q Consensus 540 ~~~e~~~lr~e~~~m~~r~~ele~~~~~m~~~~~ 573 (576)
+...++.|+.|++++|-++.+++.+...|++.-+
T Consensus 25 Lq~Ql~~Lq~Ev~~LRGqiE~~~~~l~ql~~rQr 58 (83)
T 2xdj_A 25 LQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQK 58 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 4567778888888888888888888888877544
No 45
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=37.67 E-value=70 Score=21.33 Aligned_cols=21 Identities=33% Similarity=0.659 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 008150 541 HKEIKVMKKEVETMKMQLNQL 561 (576)
Q Consensus 541 ~~e~~~lr~e~~~m~~r~~el 561 (576)
.+|+..||.|+..+|-.+..|
T Consensus 8 kqeiaalkkeiaalkfeiaal 28 (33)
T 4dzn_A 8 KQEIAALKKEIAALKFEIAAL 28 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 444445555554444444433
No 46
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=37.27 E-value=63 Score=26.15 Aligned_cols=35 Identities=20% Similarity=0.412 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 008150 542 KEIKVMKKEVETMKMQLNQLQMCKTQLQNQVKSWR 576 (576)
Q Consensus 542 ~e~~~lr~e~~~m~~r~~ele~~~~~m~~~~~~~~ 576 (576)
.|++....-++.+..++.|.+.+...++.++.|.|
T Consensus 33 eELr~kd~~I~eLEk~L~ekd~eI~~LqseLDKfr 67 (72)
T 3nmd_A 33 EELRQRDALIDELELELDQKDELIQMLQNELDKYR 67 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34444445578888888888888999999988764
No 47
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=35.51 E-value=91 Score=33.76 Aligned_cols=83 Identities=11% Similarity=0.185 Sum_probs=55.7
Q ss_pred eEEEEECCeEeeeccchhcccCH-HHHHhhcccc--cCCCCCCCCeEEecCCCCcHHHHHHHHHHHcC-ceEeecc-ccH
Q 008150 67 DLIVQIADSCFHLHKLAMVSKSE-YLNRIVFKRR--SNGEKENNPMIFISNFPGGIEIFELVVKFCYG-WKVDVTA-TNI 141 (576)
Q Consensus 67 DV~v~V~~~~F~lHK~vLas~S~-yfr~lf~~~~--e~~~~~~~~~v~L~~~pgGae~felv~~FcY~-~~i~it~-~NV 141 (576)
=|+|.|||..|...+.-|...-+ .+-+++.... ... ..++-+ +-.|+.|+.+++|..+ |++.+.. -.+
T Consensus 53 ~v~lNVgG~~f~t~~~tL~~~p~s~l~~~~~~~~~~~~~----~~~~f~---DR~~~~F~~IL~~~r~~g~l~~p~~~~~ 125 (514)
T 2r9r_B 53 RVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPL----RNEYFF---DRNRPSFDAILYYYQSGGRLRRPVNVPL 125 (514)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTTSTTTCHHHHGGGEETT----TTEEEE---CSCHHHHHHHHHHHHHTSCCCCCTTSCH
T ss_pred EEEEEeCCEEEEecHHHHhcCCCCcccccccCCcccCCC----CCCEEE---cCChHHHHHHHHHHhcCCccccCCcccH
Confidence 47889999999998887754321 1112221110 111 235665 2347899999999999 9987643 356
Q ss_pred HHHHHHHhhcccccc
Q 008150 142 AALYSAANFLEMSDD 156 (576)
Q Consensus 142 ~~L~cAA~~LqMte~ 156 (576)
..+..-|+|.++.+.
T Consensus 126 ~~~~~E~~f~~i~~~ 140 (514)
T 2r9r_B 126 DIFSEEIRFYELGEE 140 (514)
T ss_dssp HHHHHHHHHTTCCHH
T ss_pred HHHHHHHHhcCCCHH
Confidence 778999999999974
No 48
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=34.31 E-value=75 Score=26.75 Aligned_cols=37 Identities=14% Similarity=0.207 Sum_probs=28.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 008150 539 SSHKEIKVMKKEVETMKMQLNQLQMCKTQLQNQVKSW 575 (576)
Q Consensus 539 ~~~~e~~~lr~e~~~m~~r~~ele~~~~~m~~~~~~~ 575 (576)
.+..|+..|..+++.|+....++.++...||+.+.++
T Consensus 52 ~LE~e~~~L~~e~~~L~~e~~~~~~e~d~~k~k~~~L 88 (90)
T 2wt7_B 52 HLENEKTQLIQQVEQLKQEVSRLARERDAYKVKSEKL 88 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3466777788888888888888888888888777654
No 49
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.26 E-value=26 Score=29.42 Aligned_cols=35 Identities=14% Similarity=0.046 Sum_probs=31.3
Q ss_pred EeeccccHHHHHHHHhhcccccccCcChHHHHHHHHHHHhh
Q 008150 134 VDVTATNIAALYSAANFLEMSDDLDQGNLITKTEAFLSFSI 174 (576)
Q Consensus 134 i~it~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~~v 174 (576)
=.|+++|...++..|+.++.++ |.++|..|+.+..
T Consensus 6 ~~L~~~NCl~i~~~A~~~~~~~------L~~~a~~fi~~nF 40 (105)
T 2eqx_A 6 SGVQVGNCLQVMWLADRHSDPE------LYTAAKHCAKTHL 40 (105)
T ss_dssp CCCCTTTHHHHHHHHHHTTCHH------HHHHHHHHHHHTC
T ss_pred ccCCHHHHHHHHHHHHHcCCHH------HHHHHHHHHHHHH
Confidence 3689999999999999999985 9999999998766
No 50
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=31.78 E-value=86 Score=23.94 Aligned_cols=32 Identities=13% Similarity=0.139 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008150 541 HKEIKVMKKEVETMKMQLNQLQMCKTQLQNQV 572 (576)
Q Consensus 541 ~~e~~~lr~e~~~m~~r~~ele~~~~~m~~~~ 572 (576)
..+.+.|..+-..++.++..|+.+...++..+
T Consensus 28 e~~~~~L~~~n~~L~~~i~~L~~e~~~Lk~~l 59 (61)
T 1t2k_D 28 EKKAEDLSSLNGQLQSEVTLLRNEVAQLKQLL 59 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44455566666666666666666666666554
No 51
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=31.36 E-value=34 Score=27.82 Aligned_cols=34 Identities=18% Similarity=0.331 Sum_probs=29.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008150 539 SSHKEIKVMKKEVETMKMQLNQLQMCKTQLQNQV 572 (576)
Q Consensus 539 ~~~~e~~~lr~e~~~m~~r~~ele~~~~~m~~~~ 572 (576)
.+++|-+.||..+..+-.|+++||.|..-+|.-.
T Consensus 12 AVREEVevLKe~I~EL~e~~~qLE~EN~~Lk~~a 45 (78)
T 1dip_A 12 AVREEVEILKEQIRELVEKNSQLERENTLLKTLA 45 (78)
T ss_dssp TCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3467889999999999999999999998888643
No 52
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=31.22 E-value=79 Score=26.37 Aligned_cols=34 Identities=21% Similarity=0.301 Sum_probs=25.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008150 540 SHKEIKVMKKEVETMKMQLNQLQMCKTQLQNQVK 573 (576)
Q Consensus 540 ~~~e~~~lr~e~~~m~~r~~ele~~~~~m~~~~~ 573 (576)
...+...|..|-+.++.+|.+|+++...++..+.
T Consensus 41 ~~~r~~~Le~EN~~Lr~~v~~L~~E~~~Lr~ll~ 74 (87)
T 1hjb_A 41 TQHKVLELTAENERLQKKVEQLSRELSTLRNLFK 74 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666777778888888888888888777654
No 53
>3vp9_A General transcriptional corepressor TUP1; four helix bundle; 1.80A {Saccharomyces cerevisiae} PDB: 3vp8_A
Probab=30.90 E-value=50 Score=27.96 Aligned_cols=25 Identities=4% Similarity=0.291 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Q 008150 549 KEVETMKMQLNQLQMCKTQLQNQVK 573 (576)
Q Consensus 549 ~e~~~m~~r~~ele~~~~~m~~~~~ 573 (576)
.||+.||..|.+||....+||+...
T Consensus 50 ~Emq~Ir~tvyeLE~~h~kmKq~YE 74 (92)
T 3vp9_A 50 AEMQQIRNTVYERELTHRKMKDAYE 74 (92)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4699999999999999999998643
No 54
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=28.15 E-value=63 Score=24.79 Aligned_cols=33 Identities=6% Similarity=0.233 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 008150 543 EIKVMKKEVETMKMQLNQLQMCKTQLQNQVKSW 575 (576)
Q Consensus 543 e~~~lr~e~~~m~~r~~ele~~~~~m~~~~~~~ 575 (576)
....||.--..+-.+|.+||..|.+|.+++...
T Consensus 12 q~~kLKq~n~~L~~kv~~Le~~c~e~eQEieRL 44 (58)
T 3a2a_A 12 QLLRLKQMNVQLAAKIQHLEFSCSEKEQEIERL 44 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566666777788888998899888887653
No 55
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=27.21 E-value=1.2e+02 Score=23.41 Aligned_cols=34 Identities=15% Similarity=0.210 Sum_probs=22.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008150 540 SHKEIKVMKKEVETMKMQLNQLQMCKTQLQNQVK 573 (576)
Q Consensus 540 ~~~e~~~lr~e~~~m~~r~~ele~~~~~m~~~~~ 573 (576)
+..+...|..+-+.++.++..|+.++..++..+.
T Consensus 28 Le~~v~~L~~~n~~L~~ei~~L~~e~~~Lk~~l~ 61 (63)
T 2wt7_A 28 LQAETDQLEDEKSALQTEIANLLKEKEKLEFILA 61 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666666667777777777777777766553
No 56
>2j5u_A MREC protein; bacterial cell shape determining protein MREC, cell shape regulation; 2.5A {Listeria monocytogenes}
Probab=27.02 E-value=29 Score=34.32 Aligned_cols=35 Identities=14% Similarity=0.221 Sum_probs=21.8
Q ss_pred cchHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHh
Q 008150 538 MSSHKEIKVMKKEVETMKMQLNQ---LQMCKTQLQNQV 572 (576)
Q Consensus 538 ~~~~~e~~~lr~e~~~m~~r~~e---le~~~~~m~~~~ 572 (576)
..+..||++||.+++.++.++.+ |+.|-.++++.+
T Consensus 22 ~~l~~eN~~Lk~e~~~l~~~~~~~~~l~~En~rLr~lL 59 (255)
T 2j5u_A 22 KNTYTENQHLKERLEELAQLESEVADLKKENKDLKESL 59 (255)
T ss_dssp ----CTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34567899999998888766554 455556666654
No 57
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=26.37 E-value=1.1e+02 Score=25.23 Aligned_cols=27 Identities=15% Similarity=0.397 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008150 541 HKEIKVMKKEVETMKMQLNQLQMCKTQ 567 (576)
Q Consensus 541 ~~e~~~lr~e~~~m~~r~~ele~~~~~ 567 (576)
.+..+.|-.||..+|.||+|||.+...
T Consensus 18 ~~~~E~L~qEi~~Lr~kv~elEnErlQ 44 (81)
T 3qh9_A 18 QRKAEELLQELRHLKIKVEELENERNQ 44 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355667888888888888888877443
No 58
>3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9
Probab=26.12 E-value=78 Score=27.56 Aligned_cols=30 Identities=27% Similarity=0.415 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 008150 547 MKKEVETMKMQLNQLQMCKTQLQNQVKSWR 576 (576)
Q Consensus 547 lr~e~~~m~~r~~ele~~~~~m~~~~~~~~ 576 (576)
++..+++.+.++..|......++.++..||
T Consensus 87 l~~~~~~e~~~~~~L~~~i~~Le~el~~~R 116 (117)
T 3kin_B 87 WKKKYEKEKEKNKALKSVIQHLEVELNRWR 116 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 333344444444444444444445555554
No 59
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=23.58 E-value=1.2e+02 Score=26.65 Aligned_cols=28 Identities=21% Similarity=0.306 Sum_probs=18.5
Q ss_pred hHHHHHHHHHHHH-----------HHHHHHHHHHHHHHH
Q 008150 540 SHKEIKVMKKEVE-----------TMKMQLNQLQMCKTQ 567 (576)
Q Consensus 540 ~~~e~~~lr~e~~-----------~m~~r~~ele~~~~~ 567 (576)
+.+|++.||.+++ .|+.||.+||.+...
T Consensus 20 Lkreie~lk~ele~l~~E~q~~v~ql~~~i~~Le~eL~e 58 (120)
T 3i00_A 20 LYREISGLKAQLENMKTESQRVVLQLKGHVSELEADLAE 58 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5677777777744 456677777777544
No 60
>1a93_B MAX protein, coiled coil, LZ; leucine zipper, 2D solution structure, H-bonds, buried salt bridge, proto-oncogene, nuclear protein; NMR {Mus musculus} SCOP: h.1.3.1 PDB: 2a93_B
Probab=23.44 E-value=1.2e+02 Score=21.03 Aligned_cols=28 Identities=11% Similarity=0.160 Sum_probs=22.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008150 540 SHKEIKVMKKEVETMKMQLNQLQMCKTQ 567 (576)
Q Consensus 540 ~~~e~~~lr~e~~~m~~r~~ele~~~~~ 567 (576)
.+|+|...+.|++.+|.+-.-||.+.+.
T Consensus 5 mRrKn~a~qqDIddlkrQN~~Le~Qir~ 32 (34)
T 1a93_B 5 MRRKNDTHQQDIDDLKRQNALLEQQVRA 32 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhhhHhhHhhHHHHHHHHHHHHHHHHh
Confidence 3678888888888888888888877654
No 61
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A
Probab=21.88 E-value=1.1e+02 Score=25.06 Aligned_cols=32 Identities=19% Similarity=0.271 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008150 541 HKEIKVMKKEVETMKMQLNQLQMCKTQLQNQV 572 (576)
Q Consensus 541 ~~e~~~lr~e~~~m~~r~~ele~~~~~m~~~~ 572 (576)
......|..|-+.++.+|..|+++...++..+
T Consensus 42 ~~r~~~L~~eN~~L~~~v~~L~~E~~~Lr~ll 73 (78)
T 1gu4_A 42 QHKVLELTAENERLQKKVEQLSRELSTLRNLF 73 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555677777777777778888877777654
No 62
>3he5_B Synzip2; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=21.88 E-value=1.3e+02 Score=21.95 Aligned_cols=28 Identities=18% Similarity=0.216 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008150 544 IKVMKKEVETMKMQLNQLQMCKTQLQNQ 571 (576)
Q Consensus 544 ~~~lr~e~~~m~~r~~ele~~~~~m~~~ 571 (576)
|..||..+.++|..-..||++-+.+.+.
T Consensus 5 naylrkkiarlkkdnlqlerdeqnleki 32 (52)
T 3he5_B 5 NAYLRKKIARLKKDNLQLERDEQNLEKI 32 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhhhhhhhhhhHhhHHHH
Confidence 3344444555554444444444444433
No 63
>4e61_A Protein BIM1; EB1-like motif, coiled-coil, spindle orientation, mitosis, K phosphorylation, mitotic spindle, microtubules, cell cycle; 2.45A {Saccharomyces cerevisiae}
Probab=21.82 E-value=1.3e+02 Score=26.07 Aligned_cols=25 Identities=24% Similarity=0.387 Sum_probs=20.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Q 008150 540 SHKEIKVMKKEVETMKMQLNQLQMC 564 (576)
Q Consensus 540 ~~~e~~~lr~e~~~m~~r~~ele~~ 564 (576)
...++.+|..++..++..+..||++
T Consensus 16 ~~~ei~~L~~ei~eLk~~ve~lEkE 40 (106)
T 4e61_A 16 SQETIGSLNEEIEQYKGTVSTLEIE 40 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567888888899999999889887
No 64
>3he5_A Synzip1; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=21.66 E-value=1.8e+02 Score=20.93 Aligned_cols=37 Identities=19% Similarity=0.149 Sum_probs=29.1
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008150 537 RMSSHKEIKVMKKEVETMKMQLNQLQMCKTQLQNQVK 573 (576)
Q Consensus 537 ~~~~~~e~~~lr~e~~~m~~r~~ele~~~~~m~~~~~ 573 (576)
..++..||+.||..----|.-+.-||++...+++.+.
T Consensus 12 vaslenenetlkkknlhkkdliaylekeianlrkkie 48 (49)
T 3he5_A 12 VASLENENETLKKKNLHKKDLIAYLEKEIANLRKKIE 48 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhhcccHHHHHhcccHHHHHHHHHHHHHHHHHHhc
Confidence 4466778888887766667778889999999988764
No 65
>2w6b_A RHO guanine nucleotide exchange factor 7; X-RAY crystallography, phosphoprotein, guanine-nucleotide releasing factor, GIT, PAK, PIX, COOL; 2.80A {Rattus norvegicus}
Probab=21.44 E-value=1.8e+02 Score=22.26 Aligned_cols=34 Identities=21% Similarity=0.382 Sum_probs=18.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008150 539 SSHKEIKVMKKEVETMKMQLNQLQMCKTQLQNQV 572 (576)
Q Consensus 539 ~~~~e~~~lr~e~~~m~~r~~ele~~~~~m~~~~ 572 (576)
++..|.++||.|..+|+.-+.|=++.-..|.+.+
T Consensus 14 aLkDqV~eL~qe~k~m~k~lEeEqkARk~LE~~v 47 (56)
T 2w6b_A 14 ALKDEVQELRQDNKKMKKSLEEEQRARKDLEKLV 47 (56)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455666666666666665555444444444333
No 66
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=21.43 E-value=1.4e+02 Score=24.01 Aligned_cols=33 Identities=21% Similarity=0.385 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008150 542 KEIKVMKKEVETMKMQLNQLQMCKTQLQNQVKS 574 (576)
Q Consensus 542 ~e~~~lr~e~~~m~~r~~ele~~~~~m~~~~~~ 574 (576)
.=++.|+.+...|+..+.+|.++...+++++..
T Consensus 47 ~YI~~L~~~~~~l~~e~~~L~~~~~~L~~~l~~ 79 (83)
T 1nkp_B 47 EYIQYMRRKNHTHQQDIDDLKRQNALLEQQVRA 79 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566666666666666666666666666543
No 67
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A
Probab=21.39 E-value=76 Score=24.36 Aligned_cols=33 Identities=21% Similarity=0.291 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008150 540 SHKEIKVMKKEVETMKMQLNQLQMCKTQLQNQV 572 (576)
Q Consensus 540 ~~~e~~~lr~e~~~m~~r~~ele~~~~~m~~~~ 572 (576)
+..+...|..+-+.++.++..|+.+...|++.+
T Consensus 27 Le~~v~~L~~~n~~L~~~v~~L~~e~~~Lk~~l 59 (62)
T 1jnm_A 27 LEEKVKTLKAQNSELASTANMLREQVAQLKQKV 59 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 68
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=21.02 E-value=88 Score=26.81 Aligned_cols=31 Identities=6% Similarity=0.034 Sum_probs=24.5
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008150 536 GRMSSHKEIKVMKKEVETMKMQLNQLQMCKT 566 (576)
Q Consensus 536 ~~~~~~~e~~~lr~e~~~m~~r~~ele~~~~ 566 (576)
.+.++.+++..|+.|-++++.+..+||.+..
T Consensus 13 ~~~~lr~ei~~Le~E~~rLr~~~~~LE~~Le 43 (100)
T 1go4_E 13 EADTLRLKVEELEGERSRLEEEKRMLEAQLE 43 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556788888888888888888888887753
No 69
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=20.26 E-value=1.4e+02 Score=23.02 Aligned_cols=35 Identities=11% Similarity=0.201 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 008150 541 HKEIKVMKKEVETMKMQLNQLQMCKTQLQNQVKSW 575 (576)
Q Consensus 541 ~~e~~~lr~e~~~m~~r~~ele~~~~~m~~~~~~~ 575 (576)
..+...|..+++.++.+-.+|+.+...+++++.-+
T Consensus 22 k~~~~~le~~~~~L~~~N~~L~~~i~~L~~E~~~L 56 (63)
T 1ci6_A 22 RAEQEALTGECKELEKKNEALKERADSLAKEIQYL 56 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566677777777777777777777777766543
Done!