Your job contains 1 sequence.
>008153
MKRDHQHSYGGGSGSGKGDYSSSTGNANKAKMWEEEQDTGGMDELLEVLGYKVRSSEMAD
VAQKLEQLEMVMGTAQEDGISHLATDTVHYNPSDVSGWVQSMLEGLNNTGFDSQARPIQD
PAESSTVNSILGQQTSNQSRIFNDDSEYDLRAIPGSAAYPQPDSETENNRNKRMRVEINT
ANTNTIIPTELARPVVVDSQETGVQLVHTLMACAEAIQQENLKVADALVKHIGLLAAAQA
GAMRKVATYFAEALARRIYRIYPQDCLDSSYNDILQMHFYETCPYLKFAHFTANQAILEA
FNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKL
AQLADTIGVEFEFRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKV
VSSIKAMRPKIITIVEQEANHNSPVFLDRFTEALHYYSSLFDSLEGSGLTPPSQDQVMSE
VYLGRQICNIVACDGTDRNERHETLTQWRTRLGSAGFEPVHLGSNAYKQASMLLALFAGG
DGYRVEENNGCLMLGWHTRPLIATSAWQLAKSTLVS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008153
(576 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2006747 - symbol:GAI "GIBBERELLIC ACID INSENSI... 1532 8.7e-184 2
TAIR|locus:2099624 - symbol:RGL2 "RGA-like 2" species:370... 1494 4.1e-175 2
TAIR|locus:2005516 - symbol:RGA1 "REPRESSOR OF GA1-3 1" s... 1697 1.1e-174 1
TAIR|locus:2201557 - symbol:RGL1 "RGA-like 1" species:370... 1434 3.3e-171 2
TAIR|locus:2157477 - symbol:RGL3 "RGA-like protein 3" spe... 1366 1.3e-139 1
TAIR|locus:2164783 - symbol:PAT1 "AT5G48150" species:3702... 621 1.2e-60 1
TAIR|locus:2080345 - symbol:SCR "SCARECROW" species:3702 ... 600 1.9e-58 1
TAIR|locus:2008076 - symbol:SCL5 "AT1G50600" species:3702... 598 3.2e-58 1
TAIR|locus:2044973 - symbol:SCL21 "AT2G04890" species:370... 566 7.8e-55 1
TAIR|locus:2020487 - symbol:LAS "AT1G55580" species:3702 ... 520 4.8e-54 2
TAIR|locus:2008086 - symbol:SCL3 "AT1G50420" species:3702... 308 4.6e-53 2
TAIR|locus:2165685 - symbol:AT5G41920 "AT5G41920" species... 519 7.4e-50 1
TAIR|locus:2026982 - symbol:SCL1 "AT1G21450" species:3702... 513 3.2e-49 1
TAIR|locus:2015243 - symbol:AT1G63100 "AT1G63100" species... 506 1.8e-48 1
TAIR|locus:2148293 - symbol:AT5G59450 species:3702 "Arabi... 471 4.7e-48 2
TAIR|locus:2025022 - symbol:SCL14 "SCARECROW-like 14" spe... 480 9.4e-47 2
TAIR|locus:2174974 - symbol:AT5G66770 "AT5G66770" species... 474 4.4e-45 1
TAIR|locus:2101694 - symbol:AT3G50650 "AT3G50650" species... 449 1.9e-42 1
TAIR|locus:2075155 - symbol:AT3G46600 species:3702 "Arabi... 440 1.7e-41 1
TAIR|locus:2132482 - symbol:AT4G08250 "AT4G08250" species... 437 3.6e-41 1
TAIR|locus:2040701 - symbol:AT2G37650 species:3702 "Arabi... 414 4.6e-38 1
TAIR|locus:2120106 - symbol:SHR "AT4G37650" species:3702 ... 392 2.1e-36 1
TAIR|locus:2025032 - symbol:AT1G07520 "AT1G07520" species... 400 9.7e-36 1
TAIR|locus:2184625 - symbol:SCL8 "AT5G52510" species:3702... 356 4.4e-30 1
UNIPROTKB|Q6DLS1 - symbol:SCL1 "SCARECROW-like protein" s... 295 1.2e-24 2
TAIR|locus:2115340 - symbol:HAM4 "AT4G36710" species:3702... 294 3.3e-23 2
TAIR|locus:2101801 - symbol:HAM2 "AT3G60630" species:3702... 293 1.7e-22 2
TAIR|locus:2055622 - symbol:HAM1 "AT2G45160" species:3702... 284 7.5e-22 1
TAIR|locus:2126901 - symbol:HAM3 "AT4G00150" species:3702... 285 1.3e-21 2
TAIR|locus:2083073 - symbol:AT3G49950 "AT3G49950" species... 267 1.0e-20 1
UNIPROTKB|Q84MM9 - symbol:MOC1 "Protein MONOCULM 1" speci... 256 3.1e-19 1
TAIR|locus:2087994 - symbol:AT3G13840 "AT3G13840" species... 209 9.5e-14 1
TAIR|locus:1009023400 - symbol:AT5G67411 "AT5G67411" spec... 145 1.7e-08 1
UNIPROTKB|Q1AHE4 - symbol:SCL "SCARECROW-like protein" sp... 123 7.8e-07 1
>TAIR|locus:2006747 [details] [associations]
symbol:GAI "GIBBERELLIC ACID INSENSITIVE" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA;TAS] [GO:0009938 "negative regulation of gibberellic
acid mediated signaling pathway" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010233 "phloem transport"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IGI]
[GO:0009723 "response to ethylene stimulus" evidence=IGI;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0010187 "negative regulation of seed germination" evidence=IGI]
[GO:0010218 "response to far red light" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0006808 "regulation of nitrogen utilization"
evidence=IMP] Pfam:PF03514 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0010218 GO:GO:0010187
GO:GO:0006808 GO:GO:0042538 GO:GO:2000377 EMBL:AC006917
GO:GO:0010233 GO:GO:0040029 GO:GO:0009867 GO:GO:0009863
GO:GO:0009740 EMBL:Y11337 EMBL:Y15193 EMBL:AY058194 EMBL:AY142002
IPI:IPI00535232 PIR:H86282 RefSeq:NP_172945.1 UniGene:At.15032
UniGene:At.75604 PDB:2ZSH PDB:2ZSI PDBsum:2ZSH PDBsum:2ZSI
ProteinModelPortal:Q9LQT8 SMR:Q9LQT8 DIP:DIP-32985N IntAct:Q9LQT8
STRING:Q9LQT8 EnsemblPlants:AT1G14920.1 GeneID:838057
KEGG:ath:AT1G14920 GeneFarm:4235 TAIR:At1g14920 eggNOG:NOG243696
HOGENOM:HOG000238577 InParanoid:Q9LQT8 KO:K14494 OMA:RRVYRFR
PhylomeDB:Q9LQT8 ProtClustDB:CLSN2682993 EvolutionaryTrace:Q9LQT8
Genevestigator:Q9LQT8 GermOnline:AT1G14920 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 Uniprot:Q9LQT8
Length = 533
Score = 1532 (544.3 bits), Expect = 8.7e-184, Sum P(2) = 8.7e-184
Identities = 296/440 (67%), Positives = 349/440 (79%)
Query: 143 NDDSEYDLRAIPGSAAYPQ--PDSETENNR---------NKRMRVEXXXXXXXXXXPTEL 191
+ ++EYDL+AIPG A Q DS + +N+ NKR++
Sbjct: 95 SSNAEYDLKAIPGDAILNQFAIDSASSSNQGGGGDTYTTNKRLKCSNGVVETTTATAEST 154
Query: 192 ARPVVVDSQETGVQLVHTLMACAEAIQQENLKVADALVKHIGLLAAAQAGAMRKVATYFA 251
V+VDSQE GV+LVH L+ACAEA+Q+ENL VA+ALVK IG LA +Q GAMRKVATYFA
Sbjct: 155 RHVVLVDSQENGVRLVHALLACAEAVQKENLTVAEALVKQIGFLAVSQIGAMRKVATYFA 214
Query: 252 EALARRIYRIYP-QDCLDSSYNDILQMHFYETCPYLKFAHFTANQAILEAFNNANRVHVI 310
EALARRIYR+ P Q +D S +D LQMHFYETCPYLKFAHFTANQAILEAF RVHVI
Sbjct: 215 EALARRIYRLSPSQSPIDHSLSDTLQMHFYETCPYLKFAHFTANQAILEAFQGKKRVHVI 274
Query: 311 DFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVE 370
DFS+ QG+QWPALMQALALRPGGPP FRLTGIGPP PDN D L +VG KLA LA+ I VE
Sbjct: 275 DFSMSQGLQWPALMQALALRPGGPPVFRLTGIGPPAPDNFDYLHEVGCKLAHLAEAIHVE 334
Query: 371 FEFRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSIKAMRPK 430
FE+RGFV N+LADL+ ML++RP E+E+VAVNSVFELH+LL RPG I+KV+ + ++P+
Sbjct: 335 FEYRGFVANTLADLDASMLELRPSEIESVAVNSVFELHKLLGRPGAIDKVLGVVNQIKPE 394
Query: 431 IITIVEQEANHNSPVFLDRFTEALHYYSSLFDSLEGSGLTPPSQDQVMSEVYLGRQICNI 490
I T+VEQE+NHNSP+FLDRFTE+LHYYS+LFDSLEG P QD+VMSEVYLG+QICN+
Sbjct: 395 IFTVVEQESNHNSPIFLDRFTESLHYYSTLFDSLEG---VPSGQDKVMSEVYLGKQICNV 451
Query: 491 VACDGTDRNERHETLTQWRTRLGSAGFEPVHLGSNAYKQASMLLALFAGGDGYRVEENNG 550
VACDG DR ERHETL+QWR R GSAGF H+GSNA+KQASMLLALF GG+GYRVEE++G
Sbjct: 452 VACDGPDRVERHETLSQWRNRFGSAGFAAAHIGSNAFKQASMLLALFNGGEGYRVEESDG 511
Query: 551 CLMLGWHTRPLIATSAWQLA 570
CLMLGWHTRPLIATSAW+L+
Sbjct: 512 CLMLGWHTRPLIATSAWKLS 531
Score = 273 (101.2 bits), Expect = 8.7e-184, Sum P(2) = 8.7e-184
Identities = 57/93 (61%), Positives = 67/93 (72%)
Query: 29 KAKMWEEEQDTGGMDELLEVLGYKVRSSEMADVAQKLEQLEMVMGTAQEDGISHLATDTV 88
K M EE D GMDELL VLGYKVRSSEMADVAQKLEQLE++M QED +S LAT+TV
Sbjct: 14 KTMMMNEEDDGNGMDELLAVLGYKVRSSEMADVAQKLEQLEVMMSNVQEDDLSQLATETV 73
Query: 89 HYNPSDVSGWVQSMLEGLN----NTGFDSQARP 117
HYNP+++ W+ SML LN N +D +A P
Sbjct: 74 HYNPAELYTWLDSMLTDLNPPSSNAEYDLKAIP 106
>TAIR|locus:2099624 [details] [associations]
symbol:RGL2 "RGA-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0010187 "negative regulation of seed
germination" evidence=IMP] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=TAS]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:2000377 "regulation of reactive oxygen species metabolic
process" evidence=IGI] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009062 "fatty acid catabolic process"
evidence=RCA] [GO:0009686 "gibberellin biosynthetic process"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] Pfam:PF03514 GO:GO:0009737 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0030154 GO:GO:0006952
GO:GO:0009723 GO:GO:0003700 GO:GO:0006351 GO:GO:0010187
GO:GO:0009908 GO:GO:0042538 EMBL:AC009895 GO:GO:2000377
GO:GO:0040029 GO:GO:0009867 GO:GO:0009863 GO:GO:0009740
eggNOG:NOG243696 HOGENOM:HOG000238577 KO:K14494 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AK118009 IPI:IPI00521981 RefSeq:NP_186995.1
UniGene:At.18489 UniGene:At.67027 ProteinModelPortal:Q8GXW1
SMR:Q8GXW1 IntAct:Q8GXW1 STRING:Q8GXW1 EnsemblPlants:AT3G03450.1
GeneID:821251 KEGG:ath:AT3G03450 GeneFarm:4240 TAIR:At3g03450
InParanoid:Q8GXW1 OMA:MLSELNN PhylomeDB:Q8GXW1
ProtClustDB:CLSN2684085 Genevestigator:Q8GXW1 GermOnline:AT3G03450
Uniprot:Q8GXW1
Length = 547
Score = 1494 (531.0 bits), Expect = 4.1e-175, Sum P(2) = 4.1e-175
Identities = 294/434 (67%), Positives = 350/434 (80%)
Query: 144 DDSEYDLRAIPGSAAYPQPDSE-TENNRNKRMRVEXXXXXXXXXXPTELARPVV-VDSQE 201
D SEYDLRAIPG +A+P+ + E +KR+R+ E R VV VDSQE
Sbjct: 121 DRSEYDLRAIPGLSAFPKEEEVFDEEASSKRIRLGSWCESSD-----ESTRSVVLVDSQE 175
Query: 202 TGVQLVHTLMACAEAIQQENLKVADALVKHIGLLAAAQAGAMRKVATYFAEALARRIYRI 261
TGV+LVH L+ACAEAI QENL +ADALVK +G LA +QAGAM KVATYFA+ALARRIYR
Sbjct: 176 TGVRLVHALVACAEAIHQENLNLADALVKRVGTLAGSQAGAMGKVATYFAQALARRIYRD 235
Query: 262 YPQD---C--LDSSYNDILQMHFYETCPYLKFAHFTANQAILEAFNNANRVHVIDFSLKQ 316
Y + C ++ S+ ++L+MHFYE+CPYLKFAHFTANQAILEA A RVHVID L Q
Sbjct: 236 YTAETDVCAAVNPSFEEVLEMHFYESCPYLKFAHFTANQAILEAVTTARRVHVIDLGLNQ 295
Query: 317 GMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRGF 376
GMQWPALMQALALRPGGPP+FRLTGIGPPQ +N+D+LQQ+GWKLAQ A +GVEFEF+G
Sbjct: 296 GMQWPALMQALALRPGGPPSFRLTGIGPPQTENSDSLQQLGWKLAQFAQNMGVEFEFKGL 355
Query: 377 VCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSIKAMRPKIITIVE 436
SL+DLEP+M + RP E ET+ VNSVFELHRLLAR G IEK+++++KA++P I+T+VE
Sbjct: 356 AAESLSDLEPEMFETRP-ESETLVVNSVFELHRLLARSGSIEKLLNTVKAIKPSIVTVVE 414
Query: 437 QEANHNSPVFLDRFTEALHYYSSLFDSLEGSGLTPPSQDQVMSEVYLGRQICNIVACDGT 496
QEANHN VFLDRF EALHYYSSLFDSLE S + PSQD+VMSEVYLGRQI N+VA +G+
Sbjct: 415 QEANHNGIVFLDRFNEALHYYSSLFDSLEDS-YSLPSQDRVMSEVYLGRQILNVVAAEGS 473
Query: 497 DRNERHETLTQWRTRLGSAGFEPVHLGSNAYKQASMLLALFAGGDGYRVEENNGCLMLGW 556
DR ERHET QWR R+ SAGF+P+HLGS+A+KQASMLL+L+A GDGYRVEEN+GCLM+GW
Sbjct: 474 DRVERHETAAQWRIRMKSAGFDPIHLGSSAFKQASMLLSLYATGDGYRVEENDGCLMIGW 533
Query: 557 HTRPLIATSAWQLA 570
TRPLI TSAW+LA
Sbjct: 534 QTRPLITTSAWKLA 547
Score = 229 (85.7 bits), Expect = 4.1e-175, Sum P(2) = 4.1e-175
Identities = 49/82 (59%), Positives = 62/82 (75%)
Query: 27 ANKAKMWEEEQDTGGMDELLEVLGYKVRSSEMADVAQKLEQLEMVMGTAQEDGISHLATD 86
A+K K ++ ++ DELL VLGYKVRSSEMA+VAQKLEQLEMV+ + +D S + D
Sbjct: 28 ADKKKADDDNNNSNMDDELLAVLGYKVRSSEMAEVAQKLEQLEMVL--SNDDVGSTVLND 85
Query: 87 TVHYNPSDVSGWVQSMLEGLNN 108
+VHYNPSD+S WV+SML LNN
Sbjct: 86 SVHYNPSDLSNWVESMLSELNN 107
>TAIR|locus:2005516 [details] [associations]
symbol:RGA1 "REPRESSOR OF GA1-3 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0009740
"gibberellic acid mediated signaling pathway" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009723 "response to ethylene
stimulus" evidence=IGI;RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=IGI;RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=IGI;RCA] [GO:0010029 "regulation of seed
germination" evidence=IGI] [GO:2000033 "regulation of seed dormancy
process" evidence=IGI] [GO:0010187 "negative regulation of seed
germination" evidence=IGI] [GO:0010218 "response to far red light"
evidence=IEP] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IGI] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0042176
"regulation of protein catabolic process" evidence=IMP] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0046686
"response to cadmium ion" evidence=RCA] [GO:0048444 "floral organ
morphogenesis" evidence=RCA] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IGI]
Pfam:PF03514 GO:GO:0007275 GO:GO:0009737 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009723 GO:GO:0003700
GO:GO:0006351 GO:GO:0010218 GO:GO:0010187 GO:GO:0042176
GO:GO:0042538 EMBL:AC005560 GO:GO:2000377 GO:GO:0040029
GO:GO:0009867 GO:GO:0009740 eggNOG:NOG243696 HOGENOM:HOG000238577
KO:K14494 ProtClustDB:CLSN2682993 GO:GO:0009938 GO:GO:2000033
InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
EMBL:Y11336 EMBL:Y15194 EMBL:AY052239 EMBL:AY054160 EMBL:BT010467
IPI:IPI00523272 PIR:D84426 RefSeq:NP_178266.1 UniGene:At.24012
ProteinModelPortal:Q9SLH3 SMR:Q9SLH3 IntAct:Q9SLH3 STRING:Q9SLH3
PRIDE:Q9SLH3 EnsemblPlants:AT2G01570.1 GeneID:814686
KEGG:ath:AT2G01570 GeneFarm:4238 TAIR:At2g01570 InParanoid:Q9SLH3
OMA:VHALMAC PhylomeDB:Q9SLH3 Genevestigator:Q9SLH3
GermOnline:AT2G01570 Uniprot:Q9SLH3
Length = 587
Score = 1697 (602.4 bits), Expect = 1.1e-174, P = 1.1e-174
Identities = 350/587 (59%), Positives = 407/587 (69%)
Query: 1 MKRDHQHXXXXXXXXXXXXXXXXTGNANKAKMWEEEQDTGGMD-ELLEVLGYKVRSSEMA 59
MKRDH + +EE G MD ELL VLGYKVRSSEMA
Sbjct: 1 MKRDHHQFQGRLSNHGTSSSSSSISKDKMMMVKKEEDGGGNMDDELLAVLGYKVRSSEMA 60
Query: 60 DVAQKLEQLEMVMGTAQEDGISHLATDTVHYNPSDVSGWVQSMLEGLN-------NTGFD 112
+VA KLEQLE +M QEDG+SHLATDTVHYNPS++ W+ +ML LN + G D
Sbjct: 61 EVALKLEQLETMMSNVQEDGLSHLATDTVHYNPSELYSWLDNMLSELNPPPLPASSNGLD 120
Query: 113 SQARPIQD----PAESSTVNSILGQQTSNQSRIFNDDSEYDLRAIPGSAAYPQP---DSE 165
P + PA + I G I + S + S + P +
Sbjct: 121 P-VLPSPEICGFPASDYDLKVIPGNAIYQFPAIDSSSSSNNQNKRLKSCSSPDSMVTSTS 179
Query: 166 TENNRNKRMRVEXXXXXXXXXXPTELARPVV-VDSQETGVQLVHTLMACAEAIQQENLKV 224
T + E R V+ VDSQE GV+LVH LMACAEAIQQ NL +
Sbjct: 180 TGTQIGGVIGTTVTTTTTTTTAAGESTRSVILVDSQENGVRLVHALMACAEAIQQNNLTL 239
Query: 225 ADALVKHIGLLAAAQAGAMRKVATYFAEALARRIYRIYP-QDCLDSSYNDILQMHFYETC 283
A+ALVK IG LA +QAGAMRKVATYFAEALARRIYR+ P Q+ +D +D LQMHFYETC
Sbjct: 240 AEALVKQIGCLAVSQAGAMRKVATYFAEALARRIYRLSPPQNQIDHCLSDTLQMHFYETC 299
Query: 284 PYLKFAHFTANQAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIG 343
PYLKFAHFTANQAILEAF RVHVIDFS+ QG+QWPALMQALALR GGPP FRLTGIG
Sbjct: 300 PYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQWPALMQALALREGGPPTFRLTGIG 359
Query: 344 PPQPDNTDALQQVGWKLAQLADTIGVEFEFRGFVCNSLADLEPDMLDIRPPEVETVAVNS 403
PP PDN+D L +VG KLAQLA+ I VEFE+RGFV NSLADL+ ML++RP + E VAVNS
Sbjct: 360 PPAPDNSDHLHEVGCKLAQLAEAIHVEFEYRGFVANSLADLDASMLELRPSDTEAVAVNS 419
Query: 404 VFELHRLLARPGGIEKVVSSIKAMRPKIITIVEQEANHNSPVFLDRFTEALHYYSSLFDS 463
VFELH+LL RPGGIEKV+ +K ++P I T+VEQE+NHN PVFLDRFTE+LHYYS+LFDS
Sbjct: 420 VFELHKLLGRPGGIEKVLGVVKQIKPVIFTVVEQESNHNGPVFLDRFTESLHYYSTLFDS 479
Query: 464 LEGSGLTPPSQDQVMSEVYLGRQICNIVACDGTDRNERHETLTQWRTRLGSAGFEPVHLG 523
LEG P SQD+VMSEVYLG+QICN+VAC+G DR ERHETL+QW R GS+G P HLG
Sbjct: 480 LEG---VPNSQDKVMSEVYLGKQICNLVACEGPDRVERHETLSQWGNRFGSSGLAPAHLG 536
Query: 524 SNAYKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWQLA 570
SNA+KQASMLL++F G GYRVEE+NGCLMLGWHTRPLI TSAW+L+
Sbjct: 537 SNAFKQASMLLSVFNSGQGYRVEESNGCLMLGWHTRPLITTSAWKLS 583
>TAIR|locus:2201557 [details] [associations]
symbol:RGL1 "RGA-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=IGI;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009737 GO:GO:0005634 GO:GO:0030154 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0009908 GO:GO:0042538
GO:GO:2000377 EMBL:AC020665 GO:GO:0040029 GO:GO:0009867
GO:GO:0009863 GO:GO:0009740 HOGENOM:HOG000238577 KO:K14494
GO:GO:0009938 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AJ224957 EMBL:AY048749 EMBL:AY070035
EMBL:AY096506 IPI:IPI00518407 PIR:G96688 RefSeq:NP_176809.1
UniGene:At.26400 UniGene:At.75607 ProteinModelPortal:Q9C8Y3
SMR:Q9C8Y3 IntAct:Q9C8Y3 STRING:Q9C8Y3 EnsemblPlants:AT1G66350.1
GeneID:842953 KEGG:ath:AT1G66350 GeneFarm:4239 TAIR:At1g66350
eggNOG:NOG314007 InParanoid:Q9C8Y3 OMA:TSAWRIN PhylomeDB:Q9C8Y3
ProtClustDB:CLSN2914366 Genevestigator:Q9C8Y3 GermOnline:AT1G66350
Uniprot:Q9C8Y3
Length = 511
Score = 1434 (509.9 bits), Expect = 3.3e-171, Sum P(2) = 3.3e-171
Identities = 281/409 (68%), Positives = 328/409 (80%)
Query: 162 PDSETENNRNKRMRVEXXXXXXXXXXPTELARPVVVDSQETGVQLVHTLMACAEAIQQEN 221
P E R+KR R+E VV+DSQETGV+LVH L+ACAEA+QQ N
Sbjct: 116 PRDEHVTRRSKRTRIESELSSTRSV--------VVLDSQETGVRLVHALLACAEAVQQNN 167
Query: 222 LKVADALVKHIGLLAAAQAGAMRKVATYFAEALARRIYRIYPQDCLD-SSYNDILQMHFY 280
LK+ADALVKH+GLLA++QAGAMRKVATYFAE LARRIYRIYP+D + SS++D LQ+HFY
Sbjct: 168 LKLADALVKHVGLLASSQAGAMRKVATYFAEGLARRIYRIYPRDDVALSSFSDTLQIHFY 227
Query: 281 ETCPYLKFAHFTANQAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLT 340
E+CPYLKFAHFTANQAILE F A +VHVID L G+QWPAL+QALALRP GPP FRLT
Sbjct: 228 ESCPYLKFAHFTANQAILEVFATAEKVHVIDLGLNHGLQWPALIQALALRPNGPPDFRLT 287
Query: 341 GIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRGFVCNSLADLEPDMLDIRPPEVETVA 400
GIG D +Q+VGWKL QLA TIGV FEF+ N+L+DL+P+MLDIRP +E+VA
Sbjct: 288 GIGYSLTD----IQEVGWKLGQLASTIGVNFEFKSIALNNLSDLKPEMLDIRPG-LESVA 342
Query: 401 VNSVFELHRLLARPGGIEKVVSSIKAMRPKIITIVEQEANHNSPVFLDRFTEALHYYSSL 460
VNSVFELHRLLA PG I+K +S+IK++RP I+T+VEQEANHN VFLDRFTE+LHYYSSL
Sbjct: 343 VNSVFELHRLLAHPGSIDKFLSTIKSIRPDIMTVVEQEANHNGTVFLDRFTESLHYYSSL 402
Query: 461 FDSLEGSGLTPPSQDQVMSEVYLGRQICNIVACDGTDRNERHETLTQWRTRLGSAGFEPV 520
FDSLEG PPSQD+VMSE++LGRQI N+VAC+G DR ERHETL QWR R G GF+PV
Sbjct: 403 FDSLEG----PPSQDRVMSELFLGRQILNLVACEGEDRVERHETLNQWRNRFGLGGFKPV 458
Query: 521 HLGSNAYKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWQL 569
+GSNAYKQASMLLAL+AG DGY VEEN GCL+LGW TRPLIATSAW++
Sbjct: 459 SIGSNAYKQASMLLALYAGADGYNVEENEGCLLLGWQTRPLIATSAWRI 507
Score = 1099 (391.9 bits), Expect = 8.4e-136, Sum P(2) = 8.4e-136
Identities = 227/350 (64%), Positives = 271/350 (77%)
Query: 120 DPAE-SSTVNSILGQQTSNQSRIFND-DSEYDLRAIPGSAAYPQPDSETENNRNKRMRVE 177
+P++ S V S+L + +RI DSEYDLRAIPGSA YP+ + T R+KR R+E
Sbjct: 76 NPSDLSGWVESMLSDL--DPTRIQEKPDSEYDLRAIPGSAVYPRDEHVTR--RSKRTRIE 131
Query: 178 XXXXXXXXXXPTELARPVVVDSQETGVQLVHTLMACAEAIQQENLKVADALVKHIGLLAA 237
VV+DSQETGV+LVH L+ACAEA+QQ NLK+ADALVKH+GLLA+
Sbjct: 132 SELSSTRSV--------VVLDSQETGVRLVHALLACAEAVQQNNLKLADALVKHVGLLAS 183
Query: 238 AQAGAMRKVATYFAEALARRIYRIYPQDCLD-SSYNDILQMHFYETCPYLKFAHFTANQA 296
+QAGAMRKVATYFAE LARRIYRIYP+D + SS++D LQ+HFYE+CPYLKFAHFTANQA
Sbjct: 184 SQAGAMRKVATYFAEGLARRIYRIYPRDDVALSSFSDTLQIHFYESCPYLKFAHFTANQA 243
Query: 297 ILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQV 356
ILE F A +VHVID L G+QWPAL+QALALRP GPP FRLTGIG D +Q+V
Sbjct: 244 ILEVFATAEKVHVIDLGLNHGLQWPALIQALALRPNGPPDFRLTGIGYSLTD----IQEV 299
Query: 357 GWKLAQLADTIGVEFEFRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGG 416
GWKL QLA TIGV FEF+ N+L+DL+P+MLDIRP +E+VAVNSVFELHRLLA PG
Sbjct: 300 GWKLGQLASTIGVNFEFKSIALNNLSDLKPEMLDIRPG-LESVAVNSVFELHRLLAHPGS 358
Query: 417 IEKVVSSIKAMRPKIITIVEQEANHNSPVFLDRFTEALHYYSSLFDSLEG 466
I+K +S+IK++RP I+T+VEQEANHN VFLDRFTE+LHYYSSLFDSLEG
Sbjct: 359 IDKFLSTIKSIRPDIMTVVEQEANHNGTVFLDRFTESLHYYSSLFDSLEG 408
Score = 252 (93.8 bits), Expect = 3.3e-171, Sum P(2) = 3.3e-171
Identities = 58/109 (53%), Positives = 73/109 (66%)
Query: 1 MKRDHQHXXXXXXXXXXXXXXXXTGNANKAKMWEEEQDTGGMDELLEVLGYKVRSSEMAD 60
MKR+H H G+++ + +EE G+DELL VLGYKVRSS+MAD
Sbjct: 1 MKREHNHRESSAGEG---------GSSSMTTVIKEE--AAGVDELLVVLGYKVRSSDMAD 49
Query: 61 VAQKLEQLEMVMGTAQEDGISHLATDTVHYNPSDVSGWVQSMLEGLNNT 109
VA KLEQLEMV+G DGIS+L+ +TVHYNPSD+SGWV+SML L+ T
Sbjct: 50 VAHKLEQLEMVLG----DGISNLSDETVHYNPSDLSGWVESMLSDLDPT 94
>TAIR|locus:2157477 [details] [associations]
symbol:RGL3 "RGA-like protein 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP;ISS] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;TAS] [GO:0009686 "gibberellin
biosynthetic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0048444 "floral
organ morphogenesis" evidence=RCA] Pfam:PF03514 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0040029 EMBL:AL391150 GO:GO:0009740
HOGENOM:HOG000238577 KO:K14494 InterPro:IPR021914
InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
ProtClustDB:CLSN2684085 EMBL:AK117226 EMBL:BT005905 IPI:IPI00544591
PIR:T51475 RefSeq:NP_197251.1 UniGene:At.31541
ProteinModelPortal:Q9LF53 SMR:Q9LF53 PaxDb:Q9LF53 PRIDE:Q9LF53
EnsemblPlants:AT5G17490.1 GeneID:831615 KEGG:ath:AT5G17490
GeneFarm:4241 TAIR:At5g17490 eggNOG:NOG300920 InParanoid:Q9LF53
OMA:RRIYRIH PhylomeDB:Q9LF53 Genevestigator:Q9LF53
GermOnline:AT5G17490 Uniprot:Q9LF53
Length = 523
Score = 1366 (485.9 bits), Expect = 1.3e-139, P = 1.3e-139
Identities = 289/512 (56%), Positives = 362/512 (70%)
Query: 65 LEQLEMVMGTAQEDGISH-LATDTVHYNPSDVSGWVQSM--LEGLNNTGFDSQARPIQDP 121
+E+LE G +D + LA SD++ Q + LE + + S + D
Sbjct: 18 VEKLENGCGGGGDDNMDEFLAVLGYKVRSSDMADVAQKLEQLEMVLSNDIASSSNAFNDT 77
Query: 122 AESSTVNSILGQQTSNQSRIFNDDSEYDLRAIPGSAAYPQPDS--ETENNRNKRMRVEXX 179
+ + + G S S + N + D I D + +N NKR+R+
Sbjct: 78 VHYNP-SDLSGWAQSMLSDL-NYYPDLDPNRICDLRPITDDDECCSSNSNSNKRIRLGPW 135
Query: 180 XXXXXXXXPTELARPVVVDSQETGVQLVHTLMACAEAIQQENLKVADALVKHIGLLAAAQ 239
+E R VV+ +ETGV+LV L+ACAEA+Q ENL +ADALVK +GLLAA+Q
Sbjct: 136 CDSVT----SESTRSVVL-IEETGVRLVQALVACAEAVQLENLSLADALVKRVGLLAASQ 190
Query: 240 AGAMRKVATYFAEALARRIYRIYPQDC-LDSSYNDILQMHFYETCPYLKFAHFTANQAIL 298
AGAM KVATYFAEALARRIYRI+P +D S+ +ILQM+FY++CPYLKFAHFTANQAIL
Sbjct: 191 AGAMGKVATYFAEALARRIYRIHPSAAAIDPSFEEILQMNFYDSCPYLKFAHFTANQAIL 250
Query: 299 EAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGW 358
EA + VHVID L QGMQWPALMQALALRPGGPP+FRLTG+G P N + +Q++GW
Sbjct: 251 EAVTTSRVVHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTGVG--NPSNREGIQELGW 308
Query: 359 KLAQLADTIGVEFEFRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIE 418
KLAQLA IGVEF+F G L+DLEPDM + R E ET+ VNSVFELH +L++PG IE
Sbjct: 309 KLAQLAQAIGVEFKFNGLTTERLSDLEPDMFETRT-ESETLVVNSVFELHPVLSQPGSIE 367
Query: 419 KVVSSIKAMRPKIITIVEQEANHNSPVFLDRFTEALHYYSSLFDSLEGSGLTPPSQDQVM 478
K+++++KA++P ++T+VEQEANHN VFLDRF EALHYYSSLFDSLE G+ PSQD+VM
Sbjct: 368 KLLATVKAVKPGLVTVVEQEANHNGDVFLDRFNEALHYYSSLFDSLE-DGVVIPSQDRVM 426
Query: 479 SEVYLGRQICNIVACDGTDRNERHETLTQWRTRLGSAGFEPVHLGSNAYKQASMLLALFA 538
SEVYLGRQI N+VA +G+DR ERHETL QWR R+GSAGF+PV+LGS+A+KQAS+LLAL
Sbjct: 427 SEVYLGRQILNLVATEGSDRIERHETLAQWRKRMGSAGFDPVNLGSDAFKQASLLLALSG 486
Query: 539 GGDGYRVEENNGCLMLGWHTRPLIATSAWQLA 570
GGDGYRVEEN+G LML W T+PLIA SAW+LA
Sbjct: 487 GGDGYRVEENDGSLMLAWQTKPLIAASAWKLA 518
Score = 226 (84.6 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 54/93 (58%), Positives = 59/93 (63%)
Query: 42 MDELLEVLGYKVRSSEMADVAQKLEQLEMVMGTAQEDGISHLATDTVHYNPSDVSGWVQS 101
MDE L VLGYKVRSS+MADVAQKLEQLEMV+ S+ DTVHYNPSD+SGW QS
Sbjct: 33 MDEFLAVLGYKVRSSDMADVAQKLEQLEMVLSNDIASS-SNAFNDTVHYNPSDLSGWAQS 91
Query: 102 MLEGLNN-TGFDSQA----RPIQDPAESSTVNS 129
ML LN D RPI D E + NS
Sbjct: 92 MLSDLNYYPDLDPNRICDLRPITDDDECCSSNS 124
>TAIR|locus:2164783 [details] [associations]
symbol:PAT1 "AT5G48150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009640 "photomorphogenesis"
evidence=IMP] Pfam:PF03514 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0009640
GO:GO:0004871 EMBL:AB023039 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF153443 EMBL:BT025326 EMBL:AK117483
IPI:IPI00517897 RefSeq:NP_199626.1 RefSeq:NP_974903.1
UniGene:At.7076 PRIDE:Q9LDL7 EnsemblPlants:AT5G48150.1
EnsemblPlants:AT5G48150.2 GeneID:834867 KEGG:ath:AT5G48150
GeneFarm:4233 TAIR:At5g48150 eggNOG:NOG287245 InParanoid:Q9LDL7
OMA:NSAHARG PhylomeDB:Q9LDL7 ProtClustDB:CLSN2686580
Genevestigator:Q9LDL7 Uniprot:Q9LDL7
Length = 490
Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
Identities = 137/374 (36%), Positives = 216/374 (57%)
Query: 210 LMACAEAIQQENLKVADALVKHIGLLAAAQAGAMRKVATYFAEALARRIYR----IYP-- 263
L++CA+A+ + +L +A ++++ + + + ++++ Y E L ++ IY
Sbjct: 123 LVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYKAL 182
Query: 264 QDCLDSSYNDILQ-MHF-YETCPYLKFAHFTANQAILEAFNNANRVHVIDFSLKQGMQWP 321
C + + ++L MH YE CPY KF + +AN AI EA NRVH+IDF + QG QW
Sbjct: 183 NRCPEPASTELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWV 242
Query: 322 ALMQALALRPGGPPAFRLTGIGPPQPDNT--DALQQVGWKLAQLADTIGVEFEFRGFVCN 379
L+QA A RPGGPP R+TGI L VG +LA+LA V FEF V
Sbjct: 243 TLIQAFAARPGGPPRIRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFNS-VSV 301
Query: 380 SLADLEPDMLDIRPPEVETVAVNSVFELHRL----LARPGGIEKVVSSIKAMRPKIITIV 435
S+++++P L +RP E +AVN F LH + ++ ++++ +K++ PK++T+V
Sbjct: 302 SVSEVKPKNLGVRPGEA--LAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLSPKVVTLV 359
Query: 436 EQEANHNSPVFLDRFTEALHYYSSLFDSLEGSGLTPPSQDQVMSEVY-LGRQICNIVACD 494
EQE+N N+ F RF E ++YY+++F+S++ + L + ++ E + L R + NI+AC+
Sbjct: 360 EQESNTNTAAFFPRFMETMNYYAAMFESIDVT-LPRDHKQRINVEQHCLARDVVNIIACE 418
Query: 495 GTDRNERHETLTQWRTRLGSAGFEPVHLGSNAYKQASMLLALFAGGDGYRVEENNGCLML 554
G DR ERHE L +WR+R G AGF P L LL ++ D YR+EE +G L L
Sbjct: 419 GADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYS--DKYRLEERDGALYL 476
Query: 555 GWHTRPLIATSAWQ 568
GW R L+A+ AW+
Sbjct: 477 GWMHRDLVASCAWK 490
>TAIR|locus:2080345 [details] [associations]
symbol:SCR "SCARECROW" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009630
"gravitropism" evidence=IMP] [GO:0009956 "radial pattern formation"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IMP] [GO:0008356 "asymmetric cell division"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0009630 GO:GO:0008356 GO:GO:0051457 EMBL:AL132957
GO:GO:0010103 GO:GO:0009956 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:U62798 EMBL:AY056315 EMBL:AY080840
EMBL:AY113991 IPI:IPI00524888 PIR:T47581 PIR:T51244
RefSeq:NP_190990.1 UniGene:At.71814 UniGene:At.932 IntAct:Q9M384
STRING:Q9M384 EnsemblPlants:AT3G54220.1 GeneID:824589
KEGG:ath:AT3G54220 GeneFarm:4242 TAIR:At3g54220 eggNOG:NOG311437
InParanoid:Q9M384 OMA:QERENSS PhylomeDB:Q9M384
ProtClustDB:CLSN2915643 Genevestigator:Q9M384 Uniprot:Q9M384
Length = 653
Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
Identities = 140/379 (36%), Positives = 217/379 (57%)
Query: 201 ETGVQLVHTLMACAEAIQQENLKVADALVKHIGLLAAAQAGAMRKVATYFAEALARR--- 257
E G+ L+ L+ CAEA+ +NL+ A+ L+ I L+ + ++VA YF+EA++ R
Sbjct: 285 EEGLHLLTLLLQCAEAVSADNLEEANKLLLEISQLSTPYGTSAQRVAAYFSEAMSARLLN 344
Query: 258 ----IYRIYPQDCLDSSYN----DILQMHFYETCPYLKFAHFTANQAILEAFNNANRVHV 309
IY P + +++ Q+ F P +KF+HFTANQAI EAF + VH+
Sbjct: 345 SCLGIYAALPSRWMPQTHSLKMVSAFQV-FNGISPLVKFSHFTANQAIQEAFEKEDSVHI 403
Query: 310 IDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGV 369
ID + QG+QWP L LA RPGGPP RLTG+G + +ALQ G +L+ AD +G+
Sbjct: 404 IDLDIMQGLQWPGLFHILASRPGGPPHVRLTGLGT----SMEALQATGKRLSDFADKLGL 459
Query: 370 EFEFRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSIKAMRP 429
FEF + + +L+ + L++R + E VAV+ + H L G + ++ + P
Sbjct: 460 PFEFCP-LAEKVGNLDTERLNVR--KREAVAVHWL--QHSLYDVTGSDAHTLWLLQRLAP 514
Query: 430 KIITIVEQEANHNSPVFLDRFTEALHYYSSLFDSLEGSGLTPPSQDQ-VMSEVYLGRQIC 488
K++T+VEQ+ +H FL RF EA+HYYS+LFDSL G+ S+++ V+ + L ++I
Sbjct: 515 KVVTVVEQDLSHAGS-FLGRFVEAIHYYSALFDSL-GASYGEESEERHVVEQQLLSKEIR 572
Query: 489 NIVACDGTDRNERHETLTQWRTRLGSAGFEPVHLGSNAYKQASMLLALFAGGDGYRVEEN 548
N++A G R+ + WR ++ GF+ + L NA QA++LL +F DGY + ++
Sbjct: 573 NVLAVGGPSRSGEVK-FESWREKMQQCGFKGISLAGNAATQATLLLGMFPS-DGYTLVDD 630
Query: 549 NGCLMLGWHTRPLIATSAW 567
NG L LGW L+ SAW
Sbjct: 631 NGTLKLGWKDLSLLTASAW 649
>TAIR|locus:2008076 [details] [associations]
symbol:SCL5 "AT1G50600" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC079279 EMBL:AC012561
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG287245 EMBL:AY034929 EMBL:AY039611 EMBL:BT000883
EMBL:AF036302 IPI:IPI00519165 PIR:E96542 PIR:T51236
RefSeq:NP_175475.2 UniGene:At.14827 STRING:Q8H125 PaxDb:Q8H125
PRIDE:Q8H125 EnsemblPlants:AT1G50600.1 GeneID:841482
KEGG:ath:AT1G50600 GeneFarm:4229 TAIR:At1g50600 InParanoid:Q8H125
OMA:REERHEP PhylomeDB:Q8H125 ProtClustDB:CLSN2918355
ArrayExpress:Q8H125 Genevestigator:Q8H125 Uniprot:Q8H125
Length = 597
Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
Identities = 135/374 (36%), Positives = 215/374 (57%)
Query: 210 LMACAEAIQQENLKVADALVKHIGLLAAAQAGAMRKVATYFAEALARRIYR----IYPQ- 264
L CA+A++ +L++ D L+ + + + ++++ Y E L R+ IY
Sbjct: 231 LYECAKAVENYDLEMTDWLISQLQQMVSVSGEPVQRLGAYMLEGLVARLASSGSSIYKAL 290
Query: 265 DCLDSSYNDILQ-MHF-YETCPYLKFAHFTANQAILEAFNNANRVHVIDFSLKQGMQWPA 322
C D + ++L MH YE CPY KF + +AN AI EA N + VH+IDF + QG QW +
Sbjct: 291 RCKDPTGPELLTYMHILYEACPYFKFGYESANGAIAEAVKNESFVHIIDFQISQGGQWVS 350
Query: 323 LMQALALRPGGPPAFRLTGIGPPQPD--NTDALQQVGWKLAQLADTIGVEFEFRGF-VCN 379
L++AL RPGGPP R+TGI P+ L+ VG +L +LA+ GV FEF G +C
Sbjct: 351 LIRALGARPGGPPNVRITGIDDPRSSFARQGGLELVGQRLGKLAEMCGVPFEFHGAALC- 409
Query: 380 SLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIE----KVVSSIKAMRPKIITIV 435
++E + L +R E +AVN LH + +E +++ +K + P ++T+V
Sbjct: 410 -CTEVEIEKLGVR--NGEALAVNFPLVLHHMPDESVTVENHRDRLLRLVKHLSPNVVTLV 466
Query: 436 EQEANHNSPVFLDRFTEALHYYSSLFDSLEGSGLTPPSQDQVMSEVY-LGRQICNIVACD 494
EQEAN N+ FL RF E +++Y ++F+S++ L ++++ E + L R++ N++AC+
Sbjct: 467 EQEANTNTAPFLPRFVETMNHYLAVFESIDVK-LARDHKERINVEQHCLAREVVNLIACE 525
Query: 495 GTDRNERHETLTQWRTRLGSAGFEPVHLGSNAYKQASMLLALFAGGDGYRVEENNGCLML 554
G +R ERHE L +WR+R AGF+P L S Y A++ L + + Y +EE +G L L
Sbjct: 526 GVEREERHEPLGKWRSRFHMAGFKPYPLSS--YVNATIKGLLESYSEKYTLEERDGALYL 583
Query: 555 GWHTRPLIATSAWQ 568
GW +PLI + AW+
Sbjct: 584 GWKNQPLITSCAWR 597
>TAIR|locus:2044973 [details] [associations]
symbol:SCL21 "AT2G04890" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006955 EMBL:AC007211
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:AF210732 EMBL:AK175210 EMBL:AK175990 EMBL:AK176099
EMBL:AK221099 EMBL:BT026455 IPI:IPI00534889 PIR:G84462
RefSeq:NP_178566.1 UniGene:At.48419 UniGene:At.71110 IntAct:Q9S7H5
EnsemblPlants:AT2G04890.1 GeneID:815036 KEGG:ath:AT2G04890
GeneFarm:4231 TAIR:At2g04890 eggNOG:NOG292869 InParanoid:Q9S7H5
OMA:HKERINI PhylomeDB:Q9S7H5 ProtClustDB:CLSN2912915
Genevestigator:Q9S7H5 Uniprot:Q9S7H5
Length = 413
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 134/386 (34%), Positives = 214/386 (55%)
Query: 195 VVVDSQETGVQLVHTLMACAEAIQQENLKVADALVKHIGLLAAAQAGAMRKVATYFAEAL 254
++V++ G L L+ACA+A+ + NL +A + + + + ++++ Y E L
Sbjct: 40 LIVEAISRG-DLKLVLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGL 98
Query: 255 ARRIYR----IYP--QDCLDSSYNDILQMH-FYETCPYLKFAHFTANQAILEAFNNANRV 307
R+ IY Q SY + ++ +E CPY KF + +AN AI EA + R+
Sbjct: 99 VARLAASGSSIYKSLQSREPESYEFLSYVYVLHEVCPYFKFGYMSANGAIAEAMKDEERI 158
Query: 308 HVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTI 367
H+IDF + QG QW AL+QA A RPGG P R+TG+G D + L V +L +LA
Sbjct: 159 HIIDFQIGQGSQWIALIQAFAARPGGAPNIRITGVG----DGS-VLVTVKKRLEKLAKKF 213
Query: 368 GVEFEFRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIE----KVVSS 423
V F F V ++E + LD+R + E + VN + LH L +E +++
Sbjct: 214 DVPFRFNA-VSRPSCEVEVENLDVR--DGEALGVNFAYMLHHLPDESVSMENHRDRLLRM 270
Query: 424 IKAMRPKIITIVEQEANHNSPVFLDRFTEALHYYSSLFDSLEGSGLTPPSQDQVMSEVY- 482
+K++ PK++T+VEQE N N+ FL RF E L YY+++F+S++ L ++++ E +
Sbjct: 271 VKSLSPKVVTLVEQECNTNTSPFLPRFLETLSYYTAMFESIDVM-LPRNHKERINIEQHC 329
Query: 483 LGRQICNIVACDGTDRNERHETLTQWRTRLGSAGFEPVHLGSNAYKQASMLLALFAGGDG 542
+ R + NI+AC+G +R ERHE L +W++R AGFEP L S LL ++ +G
Sbjct: 330 MARDVVNIIACEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDYS--NG 387
Query: 543 YRVEENNGCLMLGWHTRPLIATSAWQ 568
Y +EE +G L LGW R L+++ AW+
Sbjct: 388 YAIEERDGALYLGWMDRILVSSCAWK 413
>TAIR|locus:2020487 [details] [associations]
symbol:LAS "AT1G55580" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010223 "secondary shoot formation" evidence=IMP]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC002328 GO:GO:0010223
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG323432 EMBL:AY196482 EMBL:BT026519 EMBL:EF598379
EMBL:EF598380 EMBL:EF598381 EMBL:EF598382 EMBL:EF598383
EMBL:EF598384 EMBL:EF598385 EMBL:EF598386 EMBL:EF598387
EMBL:EF598388 EMBL:EF598389 EMBL:EF598390 EMBL:EF598391
EMBL:EF598392 EMBL:EF598393 EMBL:EF598394 EMBL:EF598395
EMBL:EF598396 EMBL:EF598397 EMBL:EF598398 EMBL:EF598399
EMBL:EF598400 EMBL:EF598401 EMBL:EF598402 IPI:IPI00532485
RefSeq:NP_175954.1 UniGene:At.45199 STRING:Q9ZWC5
EnsemblPlants:AT1G55580.1 GeneID:842007 KEGG:ath:AT1G55580
GeneFarm:4247 TAIR:At1g55580 InParanoid:Q9ZWC5 OMA:EREANHG
PhylomeDB:Q9ZWC5 ProtClustDB:CLSN2682663 Genevestigator:Q9ZWC5
Uniprot:Q9ZWC5
Length = 445
Score = 520 (188.1 bits), Expect = 4.8e-54, Sum P(2) = 4.8e-54
Identities = 118/334 (35%), Positives = 194/334 (58%)
Query: 247 ATYFAEALARRIYRIYPQDCLDSSYNDILQMHFYETCPYLKFAHFTANQAILEAF--NNA 304
+T F ++ + + ++ +S + + + P+++F H TANQAIL+A N+
Sbjct: 118 STVFTSSVCKEQF-LFRTKNNNSDFESCYYLWLNQLTPFIRFGHLTANQAILDATETNDN 176
Query: 305 NRVHVIDFSLKQGMQWPALMQALALR---PGGPP-AFRLTGIGPPQPDNTDALQQVGWKL 360
+H++D + QG+QWP LMQALA R P PP + R+TG G D T L + G +L
Sbjct: 177 GALHILDLDISQGLQWPPLMQALAERSSNPSSPPPSLRITGCGR---DVT-GLNRTGDRL 232
Query: 361 AQLADTIGVEFEFRGFVC--NSLADL--EPDMLDIRPPEVETVAVNSVFELHRLLARPGG 416
+ AD++G++F+F V LA L + +L + + ET+AVN V LH++ G
Sbjct: 233 TRFADSLGLQFQFHTLVIVEEDLAGLLLQIRLLALSAVQGETIAVNCVHFLHKIFNDDGD 292
Query: 417 -IEKVVSSIKAMRPKIITIVEQEANHNSPVFLDRFTEALHYYSSLFDSLEGSGLTPPSQD 475
I +S+IK++ +I+T+ E+EANH FL+RF+EA+ +Y ++FDSLE + L P S++
Sbjct: 293 MIGHFLSAIKSLNSRIVTMAEREANHGDHSFLNRFSEAVDHYMAIFDSLEAT-LPPNSRE 351
Query: 476 QV-MSEVYLGRQICNIVACDGTDRNERHETLTQWRTRLGSAGFEPVHLGSNAYKQASMLL 534
++ + + + G++I ++VA + T+R +RH W + GF V +GS A QA +LL
Sbjct: 352 RLTLEQRWFGKEILDVVAAEETERKQRHRRFEIWEEMMKRFGFVNVPIGSFALSQAKLLL 411
Query: 535 ALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWQ 568
L +GY ++ N L LGW RPL + S+W+
Sbjct: 412 RLHYPSEGYNLQFLNNSLFLGWQNRPLFSVSSWK 445
Score = 56 (24.8 bits), Expect = 4.8e-54, Sum P(2) = 4.8e-54
Identities = 18/76 (23%), Positives = 30/76 (39%)
Query: 189 TELARPVVVDSQETGVQLVH----TLMACAEAIQQENLKVADALVKHIGLLAAAQAGAMR 244
TE P+ + S H L A + Q N A L+ + L ++ +
Sbjct: 20 TENPPPLCIASSSAATSASHHLRRLLFTAANFVSQSNFTAAQNLLSILSLNSSPHGDSTE 79
Query: 245 KVATYFAEALARRIYR 260
++ F +AL+ RI R
Sbjct: 80 RLVHLFTKALSVRINR 95
>TAIR|locus:2008086 [details] [associations]
symbol:SCL3 "AT1G50420" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
GO:GO:0009739 EMBL:AC012561 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY056154 EMBL:AY091260 EMBL:AF036301
IPI:IPI00539428 PIR:E96540 PIR:T51235 RefSeq:NP_175459.1
UniGene:At.14826 IntAct:Q9LPR8 STRING:Q9LPR8
EnsemblPlants:AT1G50420.1 GeneID:841464 KEGG:ath:AT1G50420
GeneFarm:4258 TAIR:At1g50420 eggNOG:NOG310008 InParanoid:Q9LPR8
OMA:MVHVIDL PhylomeDB:Q9LPR8 ProtClustDB:CLSN2913643
Genevestigator:Q9LPR8 Uniprot:Q9LPR8
Length = 482
Score = 308 (113.5 bits), Expect = 4.6e-53, Sum P(2) = 4.6e-53
Identities = 63/162 (38%), Positives = 98/162 (60%)
Query: 411 LARPGGIEKVVSSIKAMRPKIITIVEQEANHNSPVFLDRFTEALHYYSSLFDSLEGSGLT 470
L G + +++I + PK++ + EQ+++HN ++R E+L+ Y++LFD LE + +
Sbjct: 323 LPSSGRTDSFLNAIWGLSPKVMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLE-TKVP 381
Query: 471 PPSQDQVMSEVYL-GRQICNIVACDGTDRNERHETLTQWRTRLGSAGFEPVHLGSNAYKQ 529
SQD++ E L G +I NI++C+G +R ERHE L +W R+ AGF V L A Q
Sbjct: 382 RTSQDRIKVEKMLFGEEIKNIISCEGFERRERHEKLEKWSQRIDLAGFGNVPLSYYAMLQ 441
Query: 530 ASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWQLAK 571
A LL G DGYR++E +GC ++ W RPL + SAW+ K
Sbjct: 442 ARRLLQ-GCGFDGYRIKEESGCAVICWQDRPLYSVSAWRCRK 482
Score = 304 (112.1 bits), Expect = 4.6e-53, Sum P(2) = 4.6e-53
Identities = 75/223 (33%), Positives = 124/223 (55%)
Query: 200 QETGVQLVHTLMACAEAIQQENLKVADALVKHIGLLAAAQAGAMRKVATYFAEALARRIY 259
+E G+ L+H L+ CA + +L+ A+A ++ + LA+ M+++A YF EALA RI
Sbjct: 48 EERGLYLIHLLLTCANHVASGSLQNANAALEQLSHLASPDGDTMQRIAAYFTEALANRIL 107
Query: 260 RIYP--QDCLDSSY---NDILQ-MH----FYETCPYLKFAHFTANQAILEAFNNANRVHV 309
+ +P L+++ N++ + +H F+E P LK ++ N+AILEA VHV
Sbjct: 108 KSWPGLYKALNATQTRTNNVSEEIHVRRLFFEMFPILKVSYLLTNRAILEAMEGEKMVHV 167
Query: 310 IDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGV 369
ID + QW AL+QA RP GPP R+TG+ + + L+Q+ +L + A+ + +
Sbjct: 168 IDLDASEPAQWLALLQAFNSRPEGPPHLRITGVHHQK----EVLEQMAHRLIEEAEKLDI 223
Query: 370 EFEFRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLA 412
F+F V + L L + L ++ E +AV+SV +LH LA
Sbjct: 224 PFQFNPVV-SRLDCLNVEQLRVKTGEA--LAVSSVLQLHTFLA 263
>TAIR|locus:2165685 [details] [associations]
symbol:AT5G41920 "AT5G41920" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB017067
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:BT029760 IPI:IPI00535918 RefSeq:NP_199007.1 UniGene:At.67848
UniGene:At.72727 IntAct:Q9FHZ1 DNASU:834197
EnsemblPlants:AT5G41920.1 GeneID:834197 KEGG:ath:AT5G41920
GeneFarm:4246 TAIR:At5g41920 eggNOG:NOG72098 InParanoid:Q9FHZ1
OMA:PWKGYTL PhylomeDB:Q9FHZ1 ProtClustDB:CLSN2686419
Genevestigator:Q9FHZ1 Uniprot:Q9FHZ1
Length = 405
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 134/380 (35%), Positives = 202/380 (53%)
Query: 204 VQLVHTLMACAEAIQQENLKVADALVKHIGLLAAAQAGAMRKVATYFAEALARRIYRIYP 263
++L+ L+ CAE + ++L+ A L+ I + + + +V YFA+AL R+ Y
Sbjct: 38 IKLLSLLLQCAEYVATDHLREASTLLSEISEICSPFGSSPERVVAYFAQALQTRVISSYL 97
Query: 264 QD-C--LDSSYNDILQ-------MHFYETC-PYLKFAHFTANQAILEAFNNANRVHVIDF 312
C L ++Q + Y + P +KF+HFTANQAI +A + + VH+ID
Sbjct: 98 SGACSPLSEKPLTVVQSQKIFSALQTYNSVSPLIKFSHFTANQAIFQALDGEDSVHIIDL 157
Query: 313 SLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFE 372
+ QG+QWPAL LA RP + R+TG G ++D L G +LA A ++ + FE
Sbjct: 158 DVMQGLQWPALFHILASRPRKLRSIRITGFG----SSSDLLASTGRRLADFASSLNLPFE 213
Query: 373 FRGF--VCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSIKAMRPK 430
F + +L D P L R + E V V+ + HRL G + + ++ ++P
Sbjct: 214 FHPIEGIIGNLID--PSQLATR--QGEAVVVH--WMQHRLYDVTGNNLETLEILRRLKPN 267
Query: 431 IITIVEQEANHNSP-VFLDRFTEALHYYSSLFDSLEGSGLTPPSQDQ-VMSEVYLGRQIC 488
+IT+VEQE +++ FL RF EALHYYS+LFD+L G GL S ++ + ++ LG +I
Sbjct: 268 LITVVEQELSYDDGGSFLGRFVEALHYYSALFDAL-GDGLGEESGERFTVEQIVLGTEIR 326
Query: 489 NIVACDGTDRNERHETLTQWRTRLGSAGFEPVHLGSNAYKQASMLLALFAGGDGYRVEEN 548
NIVA G R +R +W+ L GF PV L N QA +LL + +GY + E
Sbjct: 327 NIVA-HGGGRRKR----MKWKEELSRVGFRPVSLRGNPATQAGLLLGMLPW-NGYTLVEE 380
Query: 549 NGCLMLGWHTRPLIATSAWQ 568
NG L LGW L+ SAW+
Sbjct: 381 NGTLRLGWKDLSLLTASAWK 400
>TAIR|locus:2026982 [details] [associations]
symbol:SCL1 "AT1G21450" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
EMBL:AC015447 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF210731 EMBL:AY045833 EMBL:AY096626
EMBL:AY084492 EMBL:AF036300 IPI:IPI00538394 PIR:E86347 PIR:T51234
RefSeq:NP_173566.1 UniGene:At.14825 ProteinModelPortal:Q9SDQ3
STRING:Q9SDQ3 PaxDb:Q9SDQ3 PRIDE:Q9SDQ3 EnsemblPlants:AT1G21450.1
GeneID:838743 KEGG:ath:AT1G21450 GeneFarm:4232 TAIR:At1g21450
eggNOG:NOG324880 InParanoid:Q9SDQ3 OMA:SINDEWA PhylomeDB:Q9SDQ3
ProtClustDB:CLSN2913658 Genevestigator:Q9SDQ3 Uniprot:Q9SDQ3
Length = 593
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 134/420 (31%), Positives = 214/420 (50%)
Query: 163 DSETENNRNKRMRVEXXXXXXXXXXPTELARPVVVDSQETGVQLVHTLMACAEAIQQENL 222
DSE + + ++ VV SQ T Q+ L++CA A+ + L
Sbjct: 183 DSEWSYQNESEQHQDSPKESSSADSNSHVSSKEVV-SQATPKQI---LISCARALSEGKL 238
Query: 223 KVADALVKHIGLLAAAQAGAMRKVATYFAEALARRIYR----IYPQ-DCLDSSYNDILQ- 276
+ A ++V + + + Q +++A Y E LA R+ IY C + ++ L
Sbjct: 239 EEALSMVNELRQIVSIQGDPSQRIAAYMVEGLAARMAASGKFIYRALKCKEPPSDERLAA 298
Query: 277 MH-FYETCPYLKFAHFTANQAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPP 335
M +E CP KF AN AILEA VH+IDF + QG Q+ L++++A PG P
Sbjct: 299 MQVLFEVCPCFKFGFLAANGAILEAIKGEEEVHIIDFDINQGNQYMTLIRSIAELPGKRP 358
Query: 336 AFRLTGIGPPQP--DNTDALQQVGWKLAQLADTIGVEFEFRGFVCNSLADLEPDMLDIRP 393
RLTGI P+ + L+ +G +L QLA+ GV F+F+ + + + P L +P
Sbjct: 359 RLRLTGIDDPESVQRSIGGLRIIGLRLEQLAEDNGVSFKFKAMPSKT-SIVSPSTLGCKP 417
Query: 394 PEVETVAVNSVFELHRL----LARPGGIEKVVSSIKAMRPKIITIVEQEANHNSPVFLDR 449
E T+ VN F+LH + + ++++ +K++ PK++T+VEQ+ N N+ F R
Sbjct: 418 GE--TLIVNFAFQLHHMPDESVTTVNQRDELLHMVKSLNPKLVTVVEQDVNTNTSPFFPR 475
Query: 450 FTEALHYYSSLFDSLEGSGLTPPSQDQVMSEVY-LGRQICNIVACDGTDRNERHETLTQW 508
F EA YYS++F+SL+ + L SQ+++ E L R I NIVAC+G +R ER+E +W
Sbjct: 476 FIEAYEYYSAVFESLDMT-LPRESQERMNVERQCLARDIVNIVACEGEERIERYEAAGKW 534
Query: 509 RTRLGSAGFEPVHLGSNAYKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWQ 568
R R+ AGF P + + L+ + Y+++E G L W + LI SAW+
Sbjct: 535 RARMMMAGFNPKPMSAKVTNNIQNLIKQ-QYCNKYKLKEEMGELHFCWEEKSLIVASAWR 593
>TAIR|locus:2015243 [details] [associations]
symbol:AT1G63100 "AT1G63100" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700
GO:GO:0006351 EMBL:AC010795 InterPro:IPR005202 PROSITE:PS50985
IPI:IPI00520577 PIR:D96656 RefSeq:NP_176498.1 UniGene:At.66082
ProteinModelPortal:Q9CAN3 SMR:Q9CAN3 PRIDE:Q9CAN3
EnsemblPlants:AT1G63100.1 GeneID:842613 KEGG:ath:AT1G63100
GeneFarm:4261 TAIR:At1g63100 eggNOG:NOG286854 HOGENOM:HOG000241666
InParanoid:Q9CAN3 OMA:RTKCENE PhylomeDB:Q9CAN3
ProtClustDB:CLSN2682380 Genevestigator:Q9CAN3 Uniprot:Q9CAN3
Length = 658
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 130/388 (33%), Positives = 199/388 (51%)
Query: 205 QLVHTLMACAEAIQQENLKVADALVKHIGLLAAAQAGA-MRKVATYFAEALARRIYRIYP 263
+LV+ L C +AI+ N+ + + G LA+ + M ++ Y+ EALA R+ R++P
Sbjct: 273 ELVNLLTGCLDAIRSRNIAAINHFIARTGDLASPRGRTPMTRLIAYYIEALALRVARMWP 332
Query: 264 QDC-------LDSSYNDIL--QMHFY-ETCPYLKFAHFTANQAILEAFNNANRVHVIDFS 313
D + D + F + P KF HFTAN+ +L AF RVH+IDF
Sbjct: 333 HIFHIAPPREFDRTVEDESGNALRFLNQVTPIPKFIHFTANEMLLRAFEGKERVHIIDFD 392
Query: 314 LKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEF 373
+KQG+QWP+ Q+LA R P R+TGIG + + L + G +L A+ + ++FEF
Sbjct: 393 IKQGLQWPSFFQSLASRINPPHHVRITGIGESKLE----LNETGDRLHGFAEAMNLQFEF 448
Query: 374 RGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGG--IEKVVSSIKAMRPKI 431
V + L D+ ML ++ E E+VAVN V ++H+ L G I + I++ P
Sbjct: 449 HPVV-DRLEDVRLWMLHVK--EGESVAVNCVMQMHKTLYDGTGAAIRDFLGLIRSTNPIA 505
Query: 432 ITIVEQEANHNSPVFLDRFTEALHYYSSLFDSLEGSGLTPPSQDQVMSEVYLGRQICNIV 491
+ + EQEA HNS R +L YYS++FD++ + T + E+ GR+I NIV
Sbjct: 506 LVLAEQEAEHNSEQLETRVCNSLKYYSAMFDAIHTNLATDSLMRVKVEEMLFGREIRNIV 565
Query: 492 ACDGTDRNERHETLTQWRTRLGSAGFEPVHLGSNAYKQASMLLALFAG-GDGY----RVE 546
AC+G+ R ERH WR L GF + + Q+ MLL ++ +G+ R +
Sbjct: 566 ACEGSHRQERHVGFRHWRRMLEQLGFRSLGVSEREVLQSKMLLRMYGSDNEGFFNVERSD 625
Query: 547 ENNGC-------LMLGWHTRPLIATSAW 567
E+NG + L W +PL SAW
Sbjct: 626 EDNGGEGGRGGGVTLRWSEQPLYTISAW 653
>TAIR|locus:2148293 [details] [associations]
symbol:AT5G59450 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010200 "response to chitin" evidence=IEP;RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AB025604
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY035001 EMBL:AY062942
EMBL:AF036307 IPI:IPI00541926 PIR:T51233 RefSeq:NP_200753.1
UniGene:At.29225 UniGene:At.63919 UniGene:At.72775 STRING:Q9LTI5
EnsemblPlants:AT5G59450.1 GeneID:836064 KEGG:ath:AT5G59450
GeneFarm:4255 TAIR:At5g59450 eggNOG:NOG254902 HOGENOM:HOG000238576
InParanoid:Q9LTI5 OMA:KPATISK PhylomeDB:Q9LTI5
ProtClustDB:CLSN2685117 Genevestigator:Q9LTI5 Uniprot:Q9LTI5
Length = 610
Score = 471 (170.9 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 122/387 (31%), Positives = 195/387 (50%)
Query: 204 VQLVHTLMACAEAIQQENLKVADALVKHIGLLAAAQAGAMRKVATYFAEALARRIY-RIY 262
V L L CA+A+ + + A +K I +++ +++A YFAEAL RI I
Sbjct: 222 VDLRSLLTQCAQAVASFDQRRATDKLKEIRAHSSSNGDGTQRLAFYFAEALEARITGNIS 281
Query: 263 P--QDCLDSSYN---DILQMH--FYETCPYLKFAHFTANQAILEAFNNANRVHVIDFSLK 315
P + SS DIL+ + F TCP +F AN++I E A ++H++DF +
Sbjct: 282 PPVSNPFPSSTTSMVDILKAYKLFVHTCPIYVTDYFAANKSIYELAMKATKLHIVDFGVL 341
Query: 316 QGMQWPALMQALALRPGGPPAFRLTGIGPPQPD--NTDALQQVGWKLAQLADTIGVEFEF 373
G QWP L++AL+ RPGGPP R+TGI PQ +D +++ G +L + D V FEF
Sbjct: 342 YGFQWPCLLRALSKRPGGPPMLRVTGIELPQAGFRPSDRVEETGRRLKRFCDQFNVPFEF 401
Query: 374 RGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELH----RLLARPGGIEKVVSSIKAMRP 429
F+ + D L I P E T VN + L ++ + V+ + + P
Sbjct: 402 N-FIAKKWETITLDELMINPGE--TTVVNCIHRLQYTPDETVSLDSPRDTVLKLFRDINP 458
Query: 430 KIITIVEQEANHNSPVFLDRFTEALHYYSSLFDSLEGSGLTPPSQDQVMSEVYLGRQIC- 488
+ E +NSP F+ RF EAL +YSSLFD + T ++D+ + L R++
Sbjct: 459 DLFVFAEINGMYNSPFFMTRFREALFHYSSLFDMFD---TTIHAEDEYKNRSLLERELLV 515
Query: 489 ----NIVACDGTDRNERHETLTQWRTRLGSAGFEPVHLGSNAYKQASMLLALFAGGDGYR 544
++++C+G +R R ET QWR R+ AGF+P + K+A ++ D +
Sbjct: 516 RDAMSVISCEGAERFARPETYKQWRVRILRAGFKPATISKQIMKEAKEIVRKRYHRD-FV 574
Query: 545 VEENNGCLMLGWHTRPLIATSAWQLAK 571
++ +N ++ GW R + A S W+ A+
Sbjct: 575 IDSDNNWMLQGWKGRVIYAFSCWKPAE 601
Score = 48 (22.0 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 56 SEMADVAQKLEQLEMVMGTAQED 78
SEM ++A KLE + +V T QE+
Sbjct: 166 SEMEELAVKLEHVLLVCKTNQEE 188
Score = 41 (19.5 bits), Expect = 2.6e-47, Sum P(2) = 2.6e-47
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 196 VVDSQETGVQLVHTLMACAEAIQQE 220
V + +E V+L H L+ C ++E
Sbjct: 165 VSEMEELAVKLEHVLLVCKTNQEEE 189
>TAIR|locus:2025022 [details] [associations]
symbol:SCL14 "SCARECROW-like 14" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009410 "response to xenobiotic stimulus" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005634 GO:GO:0045893 GO:GO:0003700
GO:GO:0006351 GO:GO:0009410 EMBL:AC022464 InterPro:IPR005202
PROSITE:PS50985 HOGENOM:HOG000238576 EMBL:AF036309 IPI:IPI00525012
PIR:T51232 RefSeq:NP_172233.1 UniGene:At.21921 STRING:Q9XE58
PaxDb:Q9XE58 PRIDE:Q9XE58 EnsemblPlants:AT1G07530.1 GeneID:837267
KEGG:ath:AT1G07530 GeneFarm:4250 TAIR:At1g07530 eggNOG:NOG319005
OMA:HEDFVVD PhylomeDB:Q9XE58 Genevestigator:Q9XE58 Uniprot:Q9XE58
Length = 769
Score = 480 (174.0 bits), Expect = 9.4e-47, Sum P(2) = 9.4e-47
Identities = 123/386 (31%), Positives = 203/386 (52%)
Query: 198 DSQETGVQLVHTLMACAEAIQQENLKVADALVKHIGLLAAAQAGAMRKVATYFAEALARR 257
DS++ L L+ CA+A+ ++ + A+ +++ I ++ ++A YFA +L R
Sbjct: 385 DSKKETADLRTLLVLCAQAVSVDDRRTANEMLRQIREHSSPLGNGSERLAHYFANSLEAR 444
Query: 258 IY----RIYPQ-DCLDSSYNDILQMH--FYETCPYLKFAHFTANQAILEAFNNANRVHVI 310
+ +IY +S D+L+ + + CP+ K A AN +++ NAN +H+I
Sbjct: 445 LAGTGTQIYTALSSKKTSAADMLKAYQTYMSVCPFKKAAIIFANHSMMRFTANANTIHII 504
Query: 311 DFSLKQGMQWPALMQALAL-RPGGPPAFRLTGIGPPQPD--NTDALQQVGWKLAQLADTI 367
DF + G QWPAL+ L+L RPGG P R+TGI PQ + +Q+ G +LA+
Sbjct: 505 DFGISYGFQWPALIHRLSLSRPGGSPKLRITGIELPQRGFRPAEGVQETGHRLARYCQRH 564
Query: 368 GVEFEFRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGI----EKVVSS 423
V FE+ + ++ + L +R + E V VNS+F LL + + V+
Sbjct: 565 NVPFEYNA-IAQKWETIQVEDLKLR--QGEYVVVNSLFRFRNLLDETVLVNSPRDAVLKL 621
Query: 424 IKAMRPKIITIVEQEANHNSPVFLDRFTEALHYYSSLFDSLEGSGLTPPSQDQVMSEV-Y 482
I+ + P + N+N+P F+ RF EAL +YS++FD + S L + ++M E +
Sbjct: 622 IRKINPNVFIPAILSGNYNAPFFVTRFREALFHYSAVFDMCD-SKLAREDEMRLMYEKEF 680
Query: 483 LGRQICNIVACDGTDRNERHETLTQWRTRLGSAGFEPVHLGSNAYKQASMLLALFAGGD- 541
GR+I N+VAC+GT+R ER ET QW+ RL AGF + L + ++ L + G D
Sbjct: 681 YGREIVNVVACEGTERVERPETYKQWQARLIRAGFRQLPLEKELMQ--NLKLKIENGYDK 738
Query: 542 GYRVEENNGCLMLGWHTRPLIATSAW 567
+ V++N L+ GW R + A+S W
Sbjct: 739 NFDVDQNGNWLLQGWKGRIVYASSLW 764
Score = 37 (18.1 bits), Expect = 9.4e-47, Sum P(2) = 9.4e-47
Identities = 7/26 (26%), Positives = 12/26 (46%)
Query: 147 EYDLRAIPGSAAYPQPDSETENNRNK 172
+ D ++ AYP ++ N NK
Sbjct: 41 DLDFSSLDPPEAYPSQNNNNNNINNK 66
>TAIR|locus:2174974 [details] [associations]
symbol:AT5G66770 "AT5G66770" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB010700
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY062538 EMBL:BT002580
IPI:IPI00537848 RefSeq:NP_201478.1 UniGene:At.27307
ProteinModelPortal:Q9FL03 IntAct:Q9FL03 PRIDE:Q9FL03
EnsemblPlants:AT5G66770.1 GeneID:836810 KEGG:ath:AT5G66770
GeneFarm:4249 TAIR:At5g66770 eggNOG:NOG324692 HOGENOM:HOG000240374
InParanoid:Q9FL03 OMA:DASCSAP PhylomeDB:Q9FL03
ProtClustDB:CLSN2684429 Genevestigator:Q9FL03 Uniprot:Q9FL03
Length = 584
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 118/334 (35%), Positives = 185/334 (55%)
Query: 245 KVATYFAEALARRIYRIYPQDCLDSSYNDILQMHFY---ETCPYLKFAHFTANQAILEAF 301
+VA YF EAL+ R+ P SS + L + + + CPY KFAH TANQAILEA
Sbjct: 255 RVAFYFTEALSNRLSPNSPATSSSSSSTEDLILSYKTLNDACPYSKFAHLTANQAILEAT 314
Query: 302 NNANRVHVIDFSLKQGMQWPALMQALALRPGGPPA-FRLTGIGPPQPDNTD--ALQQVGW 358
+N++H++DF + QG+QWPAL+QALA R G P R++GI P + +L G
Sbjct: 315 EKSNKIHIVDFGIVQGIQWPALLQALATRTSGKPTQIRVSGIPAPSLGESPEPSLIATGN 374
Query: 359 KLAQLADTIGVEFEFRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLAR-PGGI 417
+L A + + F+F + + L + P EV +AVN + +L++LL P +
Sbjct: 375 RLRDFAKVLDLNFDFIP-ILTPIHLLNGSSFRVDPDEV--LAVNFMLQLYKLLDETPTIV 431
Query: 418 EKVVSSIKAMRPKIITIVEQEANHNSPVFLDRFTEALHYYSSLFDSLEGSGLTPPSQDQV 477
+ + K++ P+++T+ E E + N F +R AL +YS++F+SLE + L S+++V
Sbjct: 432 DTALRLAKSLNPRVVTLGEYEVSLNRVGFANRVKNALQFYSAVFESLEPN-LGRDSEERV 490
Query: 478 MSEVYL-GRQICNIVACDGTD-RNERHETLTQWRTRLGSAGFEPVHLGSNAYKQASMLLA 535
E L GR+I ++ + T ER E QWR + +AGFE V L + A QA +LL
Sbjct: 491 RVERELFGRRISGLIGPEKTGIHRERMEEKEQWRVLMENAGFESVKLSNYAVSQAKILLW 550
Query: 536 LFAGGDGYRVEENN-GCLMLGWHTRPLIATSAWQ 568
+ + Y + E+ G + L W+ PL+ S+W+
Sbjct: 551 NYNYSNLYSIVESKPGFISLAWNDLPLLTLSSWR 584
>TAIR|locus:2101694 [details] [associations]
symbol:AT3G50650 "AT3G50650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132979
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000240374
ProtClustDB:CLSN2684429 EMBL:AK229252 EMBL:AF036304 IPI:IPI00542878
PIR:T46142 PIR:T51238 RefSeq:NP_190634.1 UniGene:At.42939
PaxDb:Q9SCR0 PRIDE:Q9SCR0 EnsemblPlants:AT3G50650.1 GeneID:824228
KEGG:ath:AT3G50650 GeneFarm:4248 TAIR:At3g50650 eggNOG:NOG329237
InParanoid:Q9SCR0 OMA:LIRIKES PhylomeDB:Q9SCR0
Genevestigator:Q9SCR0 Uniprot:Q9SCR0
Length = 542
Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
Identities = 120/348 (34%), Positives = 186/348 (53%)
Query: 236 AAAQAG-AMRKVATYFAEALARRIYRIYPQDCLDSSYNDILQMH--FYETCPYLKFAHFT 292
+ +++G +++V YFAEAL+ + P SS D + + + CPY KFAH T
Sbjct: 201 SVSESGDPIQRVGYYFAEALSHKETES-PSSSSSSSLEDFILSYKTLNDACPYSKFAHLT 259
Query: 293 ANQAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPA-FRLTGIGPPQPDNTD 351
ANQAILEA N +N +H++DF + QG+QW AL+QALA R G P R++GI P ++
Sbjct: 260 ANQAILEATNQSNNIHIVDFGIFQGIQWSALLQALATRSSGKPTRIRISGIPAPSLGDSP 319
Query: 352 --ALQQVGWKLAQLADTIGVEFEFRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHR 409
+L G +L A + + FEF V + L + P EV + VN + EL++
Sbjct: 320 GPSLIATGNRLRDFAAILDLNFEFYP-VLTPIQLLNGSSFRVDPDEV--LVVNFMLELYK 376
Query: 410 LLARPGG-IEKVVSSIKAMRPKIITIVEQEANHNSPVFLDRFTEALHYYSSLFDSLEGSG 468
LL + + +++ P+I+T+ E E + N F +R +L +YS++F+SLE +
Sbjct: 377 LLDETATTVGTALRLARSLNPRIVTLGEYEVSLNRVEFANRVKNSLRFYSAVFESLEPN- 435
Query: 469 LTPPSQDQVMSE-VYLGRQICNIVACDGTDRNE---RH---ETLTQWRTRLGSAGFEPVH 521
L S++++ E V GR+I ++V D D N+ R E QWR + AGFEPV
Sbjct: 436 LDRDSKERLRVERVLFGRRIMDLVRSDD-DNNKPGTRFGLMEEKEQWRVLMEKAGFEPVK 494
Query: 522 LGSNAYKQASMLLALFAGGDGYR-VEENNGCLMLGWHTRPLIATSAWQ 568
+ A QA +LL + Y VE G + L W+ PL+ S+W+
Sbjct: 495 PSNYAVSQAKLLLWNYNYSTLYSLVESEPGFISLAWNNVPLLTVSSWR 542
>TAIR|locus:2075155 [details] [associations]
symbol:AT3G46600 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016671 "oxidoreductase
activity, acting on a sulfur group of donors, disulfide as
acceptor" evidence=IEA] [GO:0019538 "protein metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AL133314
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
ProtClustDB:CLSN2685117 EMBL:AK226419 EMBL:AY087418 IPI:IPI00537144
PIR:T45597 RefSeq:NP_190244.1 UniGene:At.595 STRING:Q9SNB8
EnsemblPlants:AT3G46600.1 GeneID:823813 KEGG:ath:AT3G46600
GeneFarm:4254 TAIR:At3g46600 eggNOG:NOG304481 InParanoid:Q9SNB8
OMA:FNESESQ PhylomeDB:Q9SNB8 Genevestigator:Q9SNB8 Uniprot:Q9SNB8
Length = 583
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 117/380 (30%), Positives = 185/380 (48%)
Query: 204 VQLVHTLMACAEAIQQENLKVADALVKHIGLLAAAQAGAMRKVATYFAEALARRIYRIY- 262
V + + LM CA+A+ + + A +K I ++ A +++ +FAEAL RI
Sbjct: 207 VDMRNLLMQCAQAVASFDQRRAFEKLKEIREHSSRHGDATQRLGYHFAEALEARITGTMT 266
Query: 263 -PQDCLDS--SYNDILQMH--FYETCPYLKFAHFTANQAILEAFNNANRVHVIDFSLKQG 317
P S S DIL+ + F + CP L +FTAN+ I E + A +H+IDF + G
Sbjct: 267 TPISATSSRTSMVDILKAYKGFVQACPTLIMCYFTANRTINELASKATTLHIIDFGILYG 326
Query: 318 MQWPALMQALALRPGGPPAFRLTGIGPPQPD--NTDALQQVGWKLAQLADTIGVEFEFRG 375
QWP L+QAL+ R GPP R+TGI PQ ++ +++ G +L + D V FE+
Sbjct: 327 FQWPCLIQALSKRDIGPPLLRVTGIELPQSGFRPSERVEETGRRLKRFCDKFNVPFEY-S 385
Query: 376 FVCNSLADLEPDMLDIRPPEVETVAVNSVFELH----RLLARPGGIEKVVSSIKAMRPKI 431
F+ + ++ D L I E T VN + L ++ + + + + P +
Sbjct: 386 FIAKNWENITLDDLVINSGE--TTVVNCILRLQYTPDETVSLNSPRDTALKLFRDINPDL 443
Query: 432 ITIVEQEANHNSPVFLDRFTEALHYYSSLFDSLEGSGLTPPSQDQVMSEVYLGRQICNIV 491
E +NSP FL RF EAL + SSLFD E + + ++ + R +++
Sbjct: 444 FVFAEINGTYNSPFFLTRFREALFHCSSLFDMYETTLSEDDNCRTLVERELIIRDAMSVI 503
Query: 492 ACDGTDRNERHETLTQWRTRLGSAGFEPVHLGSNAYKQASMLLALFAGGDGYRVEENNGC 551
AC+G++R R ET QW+ R+ AGF P L K ++ D + ++ +N
Sbjct: 504 ACEGSERFARPETYKQWQVRILRAGFRPAKLSKQIVKDGKEIVKERYHKD-FVIDNDNHW 562
Query: 552 LMLGWHTRPLIATSAWQLAK 571
+ GW R L A S W+ AK
Sbjct: 563 MFQGWKGRVLYAVSCWKPAK 582
>TAIR|locus:2132482 [details] [associations]
symbol:AT4G08250 "AT4G08250" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AL080252 EMBL:AL161510
EMBL:BT011797 IPI:IPI00529829 PIR:T10552 RefSeq:NP_192565.1
UniGene:At.50325 DNASU:826375 EnsemblPlants:AT4G08250.1
GeneID:826375 KEGG:ath:AT4G08250 GeneFarm:4263 TAIR:At4g08250
eggNOG:NOG320032 HOGENOM:HOG000239937 InParanoid:Q9SUF5 OMA:SLEAGFP
PhylomeDB:Q9SUF5 ProtClustDB:CLSN2685964 Genevestigator:Q9SUF5
Uniprot:Q9SUF5
Length = 483
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 119/387 (30%), Positives = 199/387 (51%)
Query: 200 QETGVQLVHTLMACAEAIQQENL--KVADALVKHI-GLLAAAQAGAMRKVATYFAEALAR 256
+ G++LVH L+A A+A N ++ ++ + L++ M ++A +F L++
Sbjct: 98 ESKGLRLVHLLVAAADASTGANKSRELTRVILARLKDLVSPGDRTNMERLAAHFTNGLSK 157
Query: 257 RIYR---IYPQDCLDSSYN--DILQMH--FYETCPYLKFAHFTANQAILEAFNNANRVHV 309
+ R + PQ D Y+ D++ PY+ F + TA QAILEA R+H+
Sbjct: 158 LLERDSVLCPQQHRDDVYDQADVISAFELLQNMSPYVNFGYLTATQAILEAVKYERRIHI 217
Query: 310 IDFSLKQGMQWPALMQALALRPGGPPA--FRLTGIGPPQ--PDNTDALQQVGWKLAQLAD 365
+D+ + +G+QW +LMQAL R GP A R+T + + A+Q+ G +L AD
Sbjct: 218 VDYDINEGVQWASLMQALVSRNTGPSAQHLRITALSRATNGKKSVAAVQETGRRLTAFAD 277
Query: 366 TIGVEFEFRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLAR-PGGIEKVVSSI 424
+IG F ++ ++ A + +R E V +N + L R + P + +S
Sbjct: 278 SIGQPFSYQHCKLDTNAFSTSSLKLVRG---EAVVINCMLHLPRFSHQTPSSVISFLSEA 334
Query: 425 KAMRPKIITIVEQEAN-HNSPVFLDRFTEALHYYSSLFDSLE-GSGLTPPSQDQVMSEVY 482
K + PK++T+V +E + FL RF + LH +S++FDSLE G + P++ V V+
Sbjct: 335 KTLNPKLVTLVHEEVGLMGNQGFLYRFMDLLHQFSAIFDSLEAGLSIANPARGFV-ERVF 393
Query: 483 LGRQICNIVACDGTDRNERHETLTQWRTRLGSAGFEPVHLGSNAYKQASMLLALFAGGDG 542
+G + N + T + E+ W L + GF+P+ + QA +LL+LF DG
Sbjct: 394 IGPWVANWLTRI-TANDAEVESFASWPQWLETNGFKPLEVSFTNRCQAKLLLSLF--NDG 450
Query: 543 YRVEE--NNGCLMLGWHTRPLIATSAW 567
+RVEE NG L+LGW +R L++ S W
Sbjct: 451 FRVEELGQNG-LVLGWKSRRLVSASFW 476
>TAIR|locus:2040701 [details] [associations]
symbol:AT2G37650 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] EMBL:AC004684 Pfam:PF03514 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
eggNOG:NOG319005 EMBL:AF036306 IPI:IPI00536640 PIR:T02531
PIR:T51240 RefSeq:NP_181301.1 UniGene:At.26205 UniGene:At.66411
PaxDb:O80933 PRIDE:O80933 EnsemblPlants:AT2G37650.1 GeneID:818342
KEGG:ath:AT2G37650 GeneFarm:4256 TAIR:At2g37650 InParanoid:O80933
OMA:WERVERP PhylomeDB:O80933 ProtClustDB:CLSN2912903
Genevestigator:O80933 Uniprot:O80933
Length = 718
Score = 414 (150.8 bits), Expect = 4.6e-38, P = 4.6e-38
Identities = 117/381 (30%), Positives = 189/381 (49%)
Query: 204 VQLVHTLMACAEAIQQENLKVADALVKHIGLLAAAQAGAMRKVATYFAEALARRIY---- 259
V L L+ CA+A+ ++ + A L+K I L + +++A FA L R+
Sbjct: 342 VDLRSLLIHCAQAVAADDRRCAGQLLKQIRLHSTPFGDGNQRLAHCFANGLEARLAGTGS 401
Query: 260 RIYPQDCLDS-SYNDILQMH--FYETCPYLKFAHFTANQAILEAFNNANRVHVIDFSLKQ 316
+IY S +L+ H F CP+ K ++F N+ I + N+ RVHVIDF +
Sbjct: 402 QIYKGIVSKPRSAAAVLKAHQLFLACCPFRKLSYFITNKTIRDLVGNSQRVHVIDFGILY 461
Query: 317 GMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDA--LQQVGWKLAQLADTIGVEFEFR 374
G QWP L+ ++ G P R+TGI PQP A +++ G +LA A GV FE++
Sbjct: 462 GFQWPTLIHRFSMY--GSPKVRITGIEFPQPGFRPAQRVEETGQRLAAYAKLFGVPFEYK 519
Query: 375 GFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEK----VVSSIKAMRPK 430
+ ++ + LDI E+ TV VN ++ L +E V++ I + P
Sbjct: 520 A-IAKKWDAIQLEDLDIDRDEI-TV-VNCLYRAENLHDESVKVESCRDTVLNLIGKINPD 576
Query: 431 IITIVEQEANHNSPVFLDRFTEALHYYSSLFDSLEGSGLTPPSQDQVM---SEVYLGRQI 487
+ +N+P F+ RF EAL ++SS+FD LE + P ++ M EV+ GR+
Sbjct: 577 LFVFGIVNGAYNAPFFVTRFREALFHFSSIFDMLET--IVPREDEERMFLEMEVF-GREA 633
Query: 488 CNIVACDGTDRNERHETLTQWRTRLGSAGFEPVHLGSNAYKQASMLLALFAGGDGYRVEE 547
N++AC+G +R ER ET QW R +G V + K + + F D + +++
Sbjct: 634 LNVIACEGWERVERPETYKQWHVRAMRSGLVQVPFDPSIMKTSLHKVHTFYHKD-FVIDQ 692
Query: 548 NNGCLMLGWHTRPLIATSAWQ 568
+N L+ GW R ++A S W+
Sbjct: 693 DNRWLLQGWKGRTVMALSVWK 713
>TAIR|locus:2120106 [details] [associations]
symbol:SHR "AT4G37650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008356 "asymmetric cell division"
evidence=IMP] [GO:0009956 "radial pattern formation" evidence=IMP]
[GO:0032350 "regulation of hormone metabolic process" evidence=NAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0055072 "iron ion
homeostasis" evidence=IMP] [GO:0045930 "negative regulation of
mitotic cell cycle" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 GO:GO:0005737
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0007049 EMBL:AL035605 EMBL:AL161591
GO:GO:0048366 GO:GO:0008356 GO:GO:0055072 GO:GO:0009956
GO:GO:0032350 InterPro:IPR005202 PROSITE:PS50985 EMBL:AF233752
EMBL:BT033026 EMBL:AY074547 IPI:IPI00525426 PIR:T04722
RefSeq:NP_195480.1 UniGene:At.2816 UniGene:At.71893 IntAct:Q9SZF7
STRING:Q9SZF7 PaxDb:Q9SZF7 PRIDE:Q9SZF7 EnsemblPlants:AT4G37650.1
GeneID:829919 KEGG:ath:AT4G37650 GeneFarm:4260 TAIR:At4g37650
eggNOG:NOG301144 HOGENOM:HOG000078767 InParanoid:Q9SZF7 OMA:EIGNRME
PhylomeDB:Q9SZF7 ProtClustDB:CLSN2685807 Genevestigator:Q9SZF7
Uniprot:Q9SZF7
Length = 531
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 115/390 (29%), Positives = 194/390 (49%)
Query: 210 LMACAEAIQQENLKVADALVKHIGLLAAAQAGAMRKVATYFAEALARRI-------YRIY 262
L+ A A ++ A ++ + L++ +K+A+YF +AL R+ YR
Sbjct: 147 LLEAARAFSDKDTARAQQILWTLNELSSPYGDTEQKLASYFLQALFNRMTGSGERCYRTM 206
Query: 263 ------PQDC-LDSSYNDILQMHFYETCPYLKFAHFTANQAILEAFNNANRVHVIDFSLK 315
+ C +S+ +L+ F E P+ F H AN AILEA + ++H++D S
Sbjct: 207 VTAAATEKTCSFESTRKTVLK--FQEVSPWATFGHVAANGAILEAVDGEAKIHIVDISST 264
Query: 316 QGMQWPALMQALALRPGGPPAFRLTGIGPPQP---DNTDA---LQQVGWKLAQLADTIGV 369
QWP L++ALA R P RLT + D T + ++++G ++ + A +GV
Sbjct: 265 FCTQWPTLLEALATRSDDTPHLRLTTVVVANKFVNDQTASHRMMKEIGNRMEKFARLMGV 324
Query: 370 EFEFRGFVCNSLADL-EPDM--LDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSIKA 426
F+F + + + DL E D+ LD++P EV +A+N V +H + +R + V+SS +
Sbjct: 325 PFKFN--IIHHVGDLSEFDLNELDVKPDEV--LAINCVGAMHGIASRGSPRDAVISSFRR 380
Query: 427 MRPKIITIVEQEAN-------HNSPVFLDRFTEALHYYSSLFDSLEGSGLTPPSQDQVMS 479
+RP+I+T+VE+EA+ FL F E L ++ F+S E S S +++M
Sbjct: 381 LRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWFRVCFESWEES-FPRTSNERLML 439
Query: 480 EVYLGRQICNIVACDGTDRNERHETLTQWRTRLGSAGFEPVHLGSNAYKQASMLLALFAG 539
E GR I ++VAC+ +D ER ET +W R+ ++GF V LL +
Sbjct: 440 ERAAGRAIVDLVACEPSDSTERRETARKWSRRMRNSGFGAVGYSDEVADDVRALLRRYKE 499
Query: 540 GDGYRVEENNGC-LMLGWHTRPLIATSAWQ 568
G V+ + + L W +P++ SAW+
Sbjct: 500 GVWSMVQCPDAAGIFLCWRDQPVVWASAWR 529
>TAIR|locus:2025032 [details] [associations]
symbol:AT1G07520 "AT1G07520" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 GO:GO:0010200 EMBL:AC022464
InterPro:IPR005202 PROSITE:PS50985 PIR:T51232 eggNOG:NOG319005
EMBL:AB493440 EMBL:BX839686 IPI:IPI00525480 IPI:IPI01019456
RefSeq:NP_172232.1 UniGene:At.63938 UniGene:At.71785 STRING:Q3EDH0
PRIDE:Q3EDH0 GeneID:837266 KEGG:ath:AT1G07520 GeneFarm:4253
TAIR:At1g07520 InParanoid:Q3EDH0 OMA:VRIENEV Genevestigator:Q3EDH0
Uniprot:Q3EDH0
Length = 695
Score = 400 (145.9 bits), Expect = 9.7e-36, P = 9.7e-36
Identities = 108/378 (28%), Positives = 186/378 (49%)
Query: 210 LMACAEAIQQENLKVADALVKHIGLLAAAQAGAMRKVATYFAEALARRI-------YRIY 262
L CA+++ + AD L++ I + A +++A +FA AL R+ + Y
Sbjct: 319 LTLCAQSVSAGDKITADDLLRQIRKQCSPVGDASQRLAHFFANALEARLEGSTGTMIQSY 378
Query: 263 PQDCLDSSYN---DILQMH--FYETCPYLKFAHFTANQAILEAFNNANRVHVIDFSLKQG 317
D + S IL+ + F P++ +F +N+ IL+A +A+ +H++DF + G
Sbjct: 379 -YDSISSKKRTAAQILKSYSVFLSASPFMTLIYFFSNKMILDAAKDASVLHIVDFGILYG 437
Query: 318 MQWPALMQALALRPGGPPAFRLTGIGPPQPD--NTDALQQVGWKLAQLADTIGVEFEFRG 375
QWP +Q L+ G R+TGI PQ T+ +Q G +L + GV FE+
Sbjct: 438 FQWPMFIQHLSKSNPGLRKLRITGIEIPQHGLRPTERIQDTGRRLTEYCKRFGVPFEYNA 497
Query: 376 FVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLL-ARPGGIE----KVVSSIKAMRPK 430
+ ++ + IRP EV +AVN+V L PG + + I+ M P
Sbjct: 498 IASKNWETIKMEEFKIRPNEV--LAVNAVLRFKNLRDVIPGEEDCPRDGFLKLIRDMNPN 555
Query: 431 IITIVEQEANHNSPVFLDRFTEALHYYSSLFDSLEGSGLTPPSQDQVMSE-VYLGRQICN 489
+ + N+P F RF EAL +YS+LFD L G+ L+ + +++ E + GR++ N
Sbjct: 556 VFLSSTVNGSFNAPFFTTRFKEALFHYSALFD-LFGATLSKENPERIHFEGEFYGREVMN 614
Query: 490 IVACDGTDRNERHETLTQWRTRLGSAGFEPVHLGSNAYKQASMLLALFAGGDGYRVEENN 549
++AC+G DR ER ET QW+ R+ AGF+ + + + + + + ++E++
Sbjct: 615 VIACEGVDRVERPETYKQWQVRMIRAGFKQKPVEAELVQLFREKMKKWGYHKDFVLDEDS 674
Query: 550 GCLMLGWHTRPLIATSAW 567
+ GW R L ++S W
Sbjct: 675 NWFLQGWKGRILFSSSCW 692
>TAIR|locus:2184625 [details] [associations]
symbol:SCL8 "AT5G52510" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
Pfam:PF03514 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AP000378 EMBL:AF036305
EMBL:AY099686 EMBL:AY128868 IPI:IPI00531227 PIR:T51239
RefSeq:NP_200064.3 UniGene:At.22412 UniGene:At.71617 STRING:Q9FYR7
PRIDE:Q9FYR7 EnsemblPlants:AT5G52510.1 GeneID:835327
KEGG:ath:AT5G52510 GeneFarm:4234 TAIR:At5g52510 eggNOG:NOG240925
HOGENOM:HOG000239354 InParanoid:Q9FYR7 OMA:PGAPWRD PhylomeDB:Q9FYR7
ProtClustDB:CLSN2680518 Genevestigator:Q9FYR7 Uniprot:Q9FYR7
Length = 640
Score = 356 (130.4 bits), Expect = 4.4e-30, P = 4.4e-30
Identities = 116/395 (29%), Positives = 188/395 (47%)
Query: 199 SQETGVQLVHTLMACAEAIQQENLKVADALVKHIGLLAAAQAGAMRKVATYFAEALARRI 258
S T V T+M A AI + ++A ++ + + + K+ + AL RI
Sbjct: 258 STTTSVCSRQTVMEIATAIAEGKTEIATEILARVSQTPNLERNSEEKLVDFMVAALRSRI 317
Query: 259 Y----RIYPQDCLDSSYNDILQMHFYETCPYLKF--AHFTANQAILEAFNNANRV---HV 309
+Y ++ L S+ ++ C L F A+ A A NN + HV
Sbjct: 318 ASPVTELYGKEHLISTQ----LLYELSPCFKLGFEAANLAILDA---ADNNDGGMMIPHV 370
Query: 310 IDFSLKQGMQWPALMQALALRPGGP------PAFRLTGI-----GPPQPDN-TDALQQVG 357
IDF + +G Q+ L++ L+ R G P ++T + G D + L+ VG
Sbjct: 371 IDFDIGEGGQYVNLLRTLSTRRNGKSQSQNSPVVKITAVANNVYGCLVDDGGEERLKAVG 430
Query: 358 WKLAQLADTIGVEFEFRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRL----LAR 413
L+QL D +G+ F L DL + L P E T+AVN F+L+R+ +
Sbjct: 431 DLLSQLGDRLGISVSFNVVTSLRLGDLNRESLGCDPDE--TLAVNLAFKLYRVPDESVCT 488
Query: 414 PGGIEKVVSSIKAMRPKIITIVEQEANHNSPVFLDRFTEALHYYSSLFDSLEGSGLTPPS 473
++++ +K ++P+++T+VEQE N N+ FL R +E+ Y +L +S+E S + +
Sbjct: 489 ENPRDELLRRVKGLKPRVVTLVEQEMNSNTAPFLGRVSESCACYGALLESVE-STVPSTN 547
Query: 474 QDQVMSEVYLGRQICNIVACDGTDRNERHETLTQWRTRLGSAGFEPVHLGSNAYKQASML 533
D+ E +GR++ N VAC+G DR ER E +WR R+ AGFE + L + SM
Sbjct: 548 SDRAKVEEGIGRKLVNAVACEGIDRIERCEVFGKWRMRMSMAGFELMPLSEKIAE--SMK 605
Query: 534 LALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWQ 568
G+ V+E+NG + GW R L SAW+
Sbjct: 606 SRGNRVHPGFTVKEDNGGVCFGWMGRALTVASAWR 640
>UNIPROTKB|Q6DLS1 [details] [associations]
symbol:SCL1 "SCARECROW-like protein" species:3708 "Brassica
napus" [GO:0005515 "protein binding" evidence=IPI] Pfam:PF03514
GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202 PROSITE:PS50985
EMBL:AY664405 IntAct:Q6DLS1 Uniprot:Q6DLS1
Length = 461
Score = 295 (108.9 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 108/387 (27%), Positives = 172/387 (44%)
Query: 197 VDSQETG-VQLVHTLMACAEAIQQENLKVADALVKHIGLLAAAQAGA-MRKVATYFAEAL 254
+DS + G + L+ + I+ + L +A ++ + AG +++ A YF EAL
Sbjct: 89 LDSVDNGGFDYIEDLIRVVDCIESDELHLAHVVLSQLNQRLQTSAGRPLQRAAFYFKEAL 148
Query: 255 ARRIYRIYPQDCLDSSYNDILQM-----HFYETCPYLKFAHFTANQAILEAFNNANR--- 306
+ S++DI+Q F P F+HFTANQAIL++ ++ +
Sbjct: 149 GSLLTGTNRNQLF--SWSDIVQKIRAIKEFSGISPIPLFSHFTANQAILDSLSSQSSSPF 206
Query: 307 VHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADT 366
VHV+DF + G Q+ +LM+ +A + R+T + D + V L Q A
Sbjct: 207 VHVVDFEIGFGGQYASLMREIAEKSANGGFLRVTAV--VAEDCAVETRLVKENLTQFAAE 264
Query: 367 IGVEFEFRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSIKA 426
+ + F+ + + L + E TV + S R++ GI + V+++
Sbjct: 265 MKIRFQIEFVLMKTFEILSFKAIRFVDGE-RTVVLISPAIFRRVI----GIAEFVNNLGR 319
Query: 427 MRPKIITIVEQEA---NHNSPVFLDRFTEALHYYSSLFDSLEGSGLTPPSQDQVMS--EV 481
+ P ++ V+ E S F F A +Y+ + +SL+ + PP D V E
Sbjct: 320 VSPNVVVFVDSEGCTETAGSGSFRREFVSAFEFYTMVLESLDAAA--PPG-DLVKKIVET 376
Query: 482 YLGRQICNIVACDGTDRNERHETLTQWRTRLGSAGFEPVHLGSNAYKQASMLLALFAGGD 541
+L R I A T N R WR L +AG PV L A QA LL A
Sbjct: 377 FLLRP--KISAAVETAANRRSAGQMTWREMLCAAGMRPVQLSQFADFQAECLLEK-AQVR 433
Query: 542 GYRVEENNGCLMLGWHTRPLIATSAWQ 568
G+ V + G L+L WH R L+ATSAW+
Sbjct: 434 GFHVAKRQGELVLCWHGRALVATSAWR 460
Score = 47 (21.6 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 8/25 (32%), Positives = 17/25 (68%)
Query: 88 VHYNPSDVSGWVQSMLEGLNNTGFD 112
V+ P+ ++G+ + L+ ++N GFD
Sbjct: 74 VYPGPNQITGYGFNSLDSVDNGGFD 98
>TAIR|locus:2115340 [details] [associations]
symbol:HAM4 "AT4G36710" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048831 "regulation of shoot system development" evidence=IGI]
Pfam:PF03514 GO:GO:0005634 GO:GO:0030154 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0048831
EMBL:AL161589 EMBL:Z99708 InterPro:IPR005202 PROSITE:PS50985
EMBL:AK118497 IPI:IPI00538111 PIR:E85433 RefSeq:NP_195389.4
UniGene:At.31304 PaxDb:O23210 PRIDE:O23210 DNASU:829824
EnsemblPlants:AT4G36710.1 GeneID:829824 KEGG:ath:AT4G36710
GeneFarm:4264 TAIR:At4g36710 eggNOG:NOG271584 HOGENOM:HOG000090733
InParanoid:O23210 OMA:ELVLCWH ProtClustDB:CLSN2717261
Genevestigator:O23210 Uniprot:O23210
Length = 486
Score = 294 (108.6 bits), Expect = 3.3e-23, Sum P(2) = 3.3e-23
Identities = 109/388 (28%), Positives = 178/388 (45%)
Query: 197 VDSQETG-VQLVHTLMACAEAIQQENLKVADALVKHIGLLAAAQAGA-MRKVATYFAEAL 254
+DS + G + L+ + ++ + L++A ++ + + AG +++ A YF EAL
Sbjct: 112 LDSVDNGGFDFIEDLIRVVDCVESDELQLAQVVLSRLNQRLRSPAGRPLQRAAFYFKEAL 171
Query: 255 ARRIYRIYPQDCLDSSYNDILQM-----HFYETCPYLKFAHFTANQAILEAFNNANR--- 306
+ SS+++I+Q + P F+HFTANQAIL++ ++ +
Sbjct: 172 GSFLTGSNRNPIRLSSWSEIVQRIRAIKEYSGISPIPLFSHFTANQAILDSLSSQSSSPF 231
Query: 307 VHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADT 366
VHV+DF + G Q+ +LM+ + + R+T + + L V L Q A
Sbjct: 232 VHVVDFEIGFGGQYASLMREITEKSVSGGFLRVTAVVAEECAVETRL--VKENLTQFAAE 289
Query: 367 IGVEFEFRGFVCNSLADLEPDMLDIRPPEVE-TVAVNSVFELHRLLARPGGIEKVVSSIK 425
+ + F+ FV ++ IR E E TV + S RL GI V++++
Sbjct: 290 MKIRFQIE-FVLMKTFEML-SFKAIRFVEGERTVVLISPAIFRRL----SGITDFVNNLR 343
Query: 426 AMRPKIITIVEQEA---NHNSPVFLDRFTEALHYYSSLFDSLEGSGLTPPSQDQVMS--E 480
+ PK++ V+ E S F F AL +Y+ + +SL+ + PP D V E
Sbjct: 344 RVSPKVVVFVDSEGWTEIAGSGSFRREFVSALEFYTMVLESLDAAA--PPG-DLVKKIVE 400
Query: 481 VYLGRQICNIVACDGTDRNERHETLTQWRTRLGSAGFEPVHLGSNAYKQASMLLALFAGG 540
++ R I A T + RH WR +AG P+ L A QA LL A
Sbjct: 401 AFVLRP--KISAAVETAADRRHTGEMTWREAFCAAGMRPIQLSQFADFQAECLLEK-AQV 457
Query: 541 DGYRVEENNGCLMLGWHTRPLIATSAWQ 568
G+ V + G L+L WH R L+ATSAW+
Sbjct: 458 RGFHVAKRQGELVLCWHGRALVATSAWR 485
Score = 37 (18.1 bits), Expect = 3.3e-23, Sum P(2) = 3.3e-23
Identities = 7/29 (24%), Positives = 17/29 (58%)
Query: 84 ATDTVHYNPSDVSGWVQSMLEGLNNTGFD 112
++ V+ + +G+ + L+ ++N GFD
Sbjct: 93 SSSDVYPGQNQTTGYGFNSLDSVDNGGFD 121
>TAIR|locus:2101801 [details] [associations]
symbol:HAM2 "AT3G60630" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0007020 "microtubule
nucleation" evidence=RCA] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0051301 GO:GO:0003700 GO:GO:0006351
GO:GO:0048768 GO:GO:0010492 EMBL:AL162295 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY064062 EMBL:AY096372 EMBL:EU550731
EMBL:EU550732 EMBL:EU550733 EMBL:EU550734 EMBL:EU550735
EMBL:EU550736 EMBL:EU550737 EMBL:EU550738 EMBL:EU550739
EMBL:EU550740 EMBL:EU550741 EMBL:EU550742 EMBL:EU550743
EMBL:EU550744 EMBL:EU550745 EMBL:EU550746 EMBL:EU550747
EMBL:EU550748 EMBL:EU550749 EMBL:EU550750 EMBL:EU550752
EMBL:EU550754 EMBL:EU550751 EMBL:EU550753 IPI:IPI00520916
PIR:T47874 RefSeq:NP_191622.1 UniGene:At.27084 IntAct:Q9M000
EnsemblPlants:AT3G60630.1 GeneID:825234 KEGG:ath:AT3G60630
GeneFarm:4227 TAIR:At3g60630 eggNOG:NOG261649 HOGENOM:HOG000239326
InParanoid:Q9M000 OMA:ANQTILE PhylomeDB:Q9M000
ProtClustDB:CLSN2683334 Genevestigator:Q9M000 Uniprot:Q9M000
Length = 623
Score = 293 (108.2 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 95/341 (27%), Positives = 153/341 (44%)
Query: 245 KVATYFAEALARRIY--RIYPQDCLDSSYNDILQMHFY----ETCPYLKFAHFTANQAIL 298
+ A+Y EAL + + P L N I ++ Y ET P+L+F +FTANQ IL
Sbjct: 294 RAASYITEALHSLLQDSSLSPPS-LSPPQNLIFRIAAYRAFSETSPFLQFVNFTANQTIL 352
Query: 299 EAFNNANRVHVIDFSLKQGMQWPALMQALA---LRPGGPPAFRLTGIGPPQPDNTD-ALQ 354
E+F +R+H++DF + G QW +L+Q LA R P+ ++T P + + L+
Sbjct: 353 ESFEGFDRIHIVDFDIGYGGQWASLIQELAGKRNRSSSAPSLKITAFASPSTVSDEFELR 412
Query: 355 QVGWKLAQLADTIGVEFEFRGFVCNSLADLEPDMLDI---RPPEVETVAVNSVFELHRLL 411
L A GV FE + N L P + R E E +AVN + ++
Sbjct: 413 FTEENLRSFAGETGVSFEIE--LLNMEILLNPTYWPLSLFRSSEKEAIAVN--LPISSMV 468
Query: 412 ARPGGIEKVVSSIKAMRPKIITIVEQEANHNSPV-FLDRFTEALHYYSSLFDSLEGSGLT 470
+ G + ++ +K + P ++ ++ + N+ F + AL YY+SL +SL+ L
Sbjct: 469 S--GYLPLILRFLKQISPNVVVCSDRSCDRNNDAPFPNGVINALQYYTSLLESLDSGNLN 526
Query: 471 PPSQDQVMSEVYLGRQICNIVACDGTDRNERHETLTQWRTRLGSAGFEPVHLGSNAYKQA 530
+ + I ++ T+R E WR+ G GF PV L A QA
Sbjct: 527 NAEAATSIERFCVQPSIQKLL----TNRYRWMERSPPWRSLFGQCGFTPVTLSQTAETQA 582
Query: 531 SMLLALFAGGDGYRVEENNGC---LMLGWHTRPLIATSAWQ 568
LL G+ +E+ L+L W + L+ SAW+
Sbjct: 583 EYLLQRNPMR-GFHLEKRQSSSPSLVLCWQRKELVTVSAWK 622
Score = 39 (18.8 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 15/66 (22%), Positives = 24/66 (36%)
Query: 52 KVRSSEMADVAQKLEQLEMVMGTAQEDGISHLATDTVHYNPSDVSGWVQSMLEGLNNTGF 111
K+ + D Q ++ + A E L T+ NP G + + LNN
Sbjct: 228 KIAGEDQNDQDQSAVIIDQLFSAAAE-----LTTNGGDNNPVLAQGILARLNHNLNNNND 282
Query: 112 DSQARP 117
D+ P
Sbjct: 283 DTNNNP 288
>TAIR|locus:2055622 [details] [associations]
symbol:HAM1 "AT2G45160" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] Pfam:PF03514
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0051301
GO:GO:0003700 GO:GO:0006351 GO:GO:0048768 GO:GO:0010492
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000239326
ProtClustDB:CLSN2683334 EMBL:BT004053 EMBL:BT020591 IPI:IPI00534274
PIR:B84887 RefSeq:NP_182041.1 UniGene:At.27046 UniGene:At.67081
UniGene:At.74179 STRING:Q7XJM8 PaxDb:Q7XJM8 PRIDE:Q7XJM8
EnsemblPlants:AT2G45160.1 GeneID:819124 KEGG:ath:AT2G45160
GeneFarm:4226 TAIR:At2g45160 eggNOG:NOG320780 InParanoid:Q7XJM8
OMA:HRWIERS PhylomeDB:Q7XJM8 Genevestigator:Q7XJM8 Uniprot:Q7XJM8
Length = 640
Score = 284 (105.0 bits), Expect = 7.5e-22, P = 7.5e-22
Identities = 94/338 (27%), Positives = 155/338 (45%)
Query: 244 RKVATYFAEALARRIYRIYPQDCLDSSYNDILQMHFY----ETCPYLKFAHFTANQAILE 299
++ A++ AEAL I+ L + N IL++ Y ET P+L+F +FTANQ+ILE
Sbjct: 315 QRAASHIAEALLSLIHN-ESSPPLITPENLILRIAAYRSFSETSPFLQFVNFTANQSILE 373
Query: 300 AFNNA--NRVHVIDFSLKQGMQWPALMQALALRPGG-----PPAFRLTGIGPPQPDNTDA 352
+ N + +R+H+IDF + G QW +LMQ LA GG + +LT PP +D
Sbjct: 374 SCNESGFDRIHIIDFDVGYGGQWSSLMQELASGVGGRRRNRASSLKLTVFAPPPSTVSDE 433
Query: 353 --LQQVGWKLAQLADTIGVEFEFRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRL 410
L+ L A + + FE L + L +R E E +AVN ++ +
Sbjct: 434 FELRFTEENLKTFAGEVKIPFEIELLSVELLLNPAYWPLSLRSSEKEAIAVN--LPVNSV 491
Query: 411 LARPGGIEKVVSSIKAMRPKIITIVEQEANHNSPVFLDRFTEALHYYSSLFDSLEGSGLT 470
+ G + ++ +K + P I+ ++ + N F + +L Y++SL +SL+ +
Sbjct: 492 AS--GYLPLILRFLKQLSPNIVVCSDRGCDRNDAPFPNAVIHSLQYHTSLLESLDAN--- 546
Query: 471 PPSQDQVMSEVYLGRQICNIVACDGTDRNERHETLTQWRTRLGSAGFEPVHLGSNAYKQA 530
D + ++ I ++ R+ E WR GF P L A QA
Sbjct: 547 QNQDDSSIERFWVQPSIEKLLM----KRHRWIERSPPWRILFTQCGFSPASLSQMAEAQA 602
Query: 531 SMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWQ 568
LL G+ VE+ L++ W + L+ SAW+
Sbjct: 603 ECLLQRNPVR-GFHVEKRQSSLVMCWQRKELVTVSAWK 639
>TAIR|locus:2126901 [details] [associations]
symbol:HAM3 "AT4G00150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010492 "maintenance of shoot apical meristem identity"
evidence=IGI] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048768 "root hair cell tip growth" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IEP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0051301 GO:GO:0007623 GO:GO:0003700
GO:GO:0006351 GO:GO:0048768 GO:GO:0010492 EMBL:AL161471
EMBL:AF069299 InterPro:IPR005202 PROSITE:PS50985
HOGENOM:HOG000239326 eggNOG:NOG320780 EMBL:AF462831 EMBL:AY133537
EMBL:AF036303 EMBL:EU550755 EMBL:EU550756 EMBL:EU550757
EMBL:EU550758 EMBL:EU550759 EMBL:EU550760 EMBL:EU550761
EMBL:EU550762 EMBL:EU550763 EMBL:EU550764 EMBL:EU550765
EMBL:EU550766 EMBL:EU550767 EMBL:EU550768 EMBL:EU550769
EMBL:EU550770 EMBL:EU550771 EMBL:EU550772 EMBL:EU550773
EMBL:EU550774 EMBL:EU550775 EMBL:EU550776 EMBL:EU550777
IPI:IPI00542979 PIR:T01343 PIR:T51237 RefSeq:NP_191926.1
UniGene:At.3732 UniGene:At.67226 IntAct:O81316
EnsemblPlants:AT4G00150.1 GeneID:828208 KEGG:ath:AT4G00150
GeneFarm:4228 TAIR:At4g00150 InParanoid:O81316 OMA:KTPPWRA
PhylomeDB:O81316 ProtClustDB:CLSN2916162 Genevestigator:O81316
Uniprot:O81316
Length = 558
Score = 285 (105.4 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 101/380 (26%), Positives = 172/380 (45%)
Query: 204 VQLVHTLMACAEAIQQENLKVADALVKHIGLLAAAQAGA-MRKVATYFAEALARRIYRIY 262
V + L+ AE I+ + +A ++ + ++ G + + A YF EAL ++ +
Sbjct: 203 VGITEQLVKAAEVIESDTC-LAQGILARLNQQLSSPVGKPLERAAFYFKEALNNLLHNV- 260
Query: 263 PQDCLDSSYNDILQMHFY----ETCPYLKFAHFTANQAILEAFNNANRVHVIDFSLKQGM 318
L+ Y+ I ++ Y E P L+FA+FT+NQA+LE+F+ +R+H+IDF + G
Sbjct: 261 -SQTLNP-YSLIFKIAAYKSFSEISPVLQFANFTSNQALLESFHGFHRLHIIDFDIGYGG 318
Query: 319 QWPALMQALALRPGGPP-AFRLTGIGPPQPDNTDALQQVGW---KLAQLADTIGVEFEFR 374
QW +LMQ L LR P + ++T P N D L+ +G+ L A I + + +
Sbjct: 319 QWASLMQELVLRDNAAPLSLKITVFASPA--NHDQLE-LGFTQDNLKHFASEINISLDIQ 375
Query: 375 GFVCNSLADLE-PDMLDIRPPEVETVAVN-SVFELHRLLARPGGIEKVVSSIKAMRPKII 432
+ L + P+ E E VAVN S L P V+ +K + P II
Sbjct: 376 VLSLDLLGSISWPNS-----SEKEAVAVNISAASFSHL---P----LVLRFVKHLSPTII 423
Query: 433 TIVEQEANHNSPVFLDRFTEALHYYSSLFDSLEGSGLTPPSQDQVMSEVYLGRQICNIVA 492
++ F + +LH +++LF+SL+ + ++ E +L + +
Sbjct: 424 VCSDRGCERTDLPFSQQLAHSLHSHTALFESLDAVNANLDAMQKI--ERFLIQPEIEKLV 481
Query: 493 CDGTDRNERHETLTQWRTRLGSAGFEPVHLGSNAYKQASMLLALFAGGDGYRVEENNGCL 552
D + ER + W+ GF PV + QA L+ G+ VE+ + L
Sbjct: 482 LDRSRPIER--PMMTWQAMFLQMGFSPVTHSNFTESQAECLVQR-TPVRGFHVEKKHNSL 538
Query: 553 MLGWHTRPLIATSAWQLAKS 572
+L W L+ SAW+ S
Sbjct: 539 LLCWQRTELVGVSAWRCRSS 558
Score = 37 (18.1 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 11/53 (20%), Positives = 20/53 (37%)
Query: 156 SAAYPQPDSETENNRNKRMRVEXXXXXXXXXXPTELARPVVVDSQETGVQLVH 208
S+++PQP S + K E PT + ++ + + V H
Sbjct: 20 SSSFPQPPSSPLLSHRKARGGEEEEEEVPAAEPTSVLDSLISPTSSSTVSSSH 72
>TAIR|locus:2083073 [details] [associations]
symbol:AT3G49950 "AT3G49950" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132978
InterPro:IPR005202 PROSITE:PS50985 eggNOG:NOG309215 EMBL:BT012553
EMBL:AK226623 IPI:IPI00534186 PIR:T45848 RefSeq:NP_190564.1
UniGene:At.50260 EnsemblPlants:AT3G49950.1 GeneID:824157
KEGG:ath:AT3G49950 GeneFarm:4259 TAIR:At3g49950
HOGENOM:HOG000241523 InParanoid:Q9SN22 OMA:MSMDFRV PhylomeDB:Q9SN22
ProtClustDB:CLSN2684384 Genevestigator:Q9SN22 Uniprot:Q9SN22
Length = 410
Score = 267 (99.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 82/303 (27%), Positives = 142/303 (46%)
Query: 279 FYETCPYLKFAHFTANQAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAF- 337
F + P+ +F AN AIL A + VH++D SL MQ P L+ A+A R PP
Sbjct: 110 FVDLTPWHRFGFIAANAAILTAVEGYSTVHIVDLSLTHCMQIPTLIDAMASRLNKPPPLL 169
Query: 338 RLTGIGPPQ---PDNTDALQQVGWKLAQLADTIGVEFEFRGFVCNSLADLEPDMLD---I 391
+LT + P + +++G KL A T + EF V ++ +D +L I
Sbjct: 170 KLTVVSSSDHFPPFINISYEELGSKLVNFATTRNITMEFT-IVPSTYSDGFSSLLQQLRI 228
Query: 392 RPPEV-ETVAVNSVFELHRLLARP-----GGIEKV-VSSIKAMRPKIITIVEQEANHNSP 444
P E + VN L + P + V + ++++ P+I+T++E++ + S
Sbjct: 229 YPSSFNEALVVNCHMMLRYIPEEPLTSSSSSLRTVFLKQLRSLNPRIVTLIEEDVDLTSE 288
Query: 445 VFLDRFTEALHYYSSLFDSLEGSGLTPPSQDQVMSEVYLGRQICNIVACDGTDRNERHET 504
++R A +Y+ FD+ + T S+ + E + +I N+VA +G +R ER ET
Sbjct: 289 NLVNRLKSAFNYFWIPFDTTD----TFMSEQRRWYEAEISWKIENVVAKEGAERVERTET 344
Query: 505 LTQWRTRLGSAGFEPVHLGSNAYKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIAT 564
+W R+ A F V + +A +L A G G + E+++ L+L W ++
Sbjct: 345 KRRWIERMREAEFGGVRVKEDAVADVKAMLEEHAVGWGMKKEDDDESLVLTWKGHSVVFA 404
Query: 565 SAW 567
+ W
Sbjct: 405 TVW 407
Score = 136 (52.9 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 48/180 (26%), Positives = 79/180 (43%)
Query: 210 LMACAEAIQQENLKVADALVKHIGLLAAAQAGAMRKVATYFAEALARRIYRIYPQDCLDS 269
L+ CA AI + + ++ + +A + +++ + F AL R P L S
Sbjct: 31 LLHCATAIDSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFLRALLSRAVSKTPT--LSS 88
Query: 270 SYNDILQ---MH---------FYETCPYLKFAHFTANQAILEAFNNANRVHVIDFSLKQG 317
+ + + Q +H F + P+ +F AN AIL A + VH++D SL
Sbjct: 89 TISFLPQADELHRFSVVELAAFVDLTPWHRFGFIAANAAILTAVEGYSTVHIVDLSLTHC 148
Query: 318 MQWPALMQALALRPGGPPAF-RLTGIGPPQ---PDNTDALQQVGWKLAQLADTIGVEFEF 373
MQ P L+ A+A R PP +LT + P + +++G KL A T + EF
Sbjct: 149 MQIPTLIDAMASRLNKPPPLLKLTVVSSSDHFPPFINISYEELGSKLVNFATTRNITMEF 208
>UNIPROTKB|Q84MM9 [details] [associations]
symbol:MOC1 "Protein MONOCULM 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0010014 "meristem initiation" evidence=IMP] Pfam:PF03514
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY242058 EMBL:AP003616 Gramene:Q84MM9
eggNOG:NOG323432 GO:GO:0010014 Uniprot:Q84MM9
Length = 441
Score = 256 (95.2 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 83/257 (32%), Positives = 124/257 (48%)
Query: 210 LMACAEAIQQENLKVADALVKHIGLLAAAQAG-AMRKVATYFAEALARRIY------RIY 262
L+ACA+ +Q+ +L A + + AA+ G A ++A +FA ALA R+ +
Sbjct: 54 LLACADLLQRGDLPAARRAAEIVLAAAASPRGDAADRLAYHFARALALRVDAKAGHGHVV 113
Query: 263 PQDCLDSSYNDILQMHFYETCPYLKFAHFTANQAILEAFNNANRVHVIDFSLKQGMQWPA 322
+ + F + P+L+FAH TANQAILEA + A RVH++D G+QWP
Sbjct: 114 VGGGAARPASSGAYLAFNQIAPFLRFAHLTANQAILEAVDGARRVHILDLDAVHGVQWPP 173
Query: 323 LMQALALR--PG-GPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRGFVCN 379
L+QA+A R P GPP R+TG G + D L + G +L A +I + F F + +
Sbjct: 174 LLQAIAERADPALGPPEVRVTGAGADR----DTLLRTGNRLRAFARSIHLPFHFTPLLLS 229
Query: 380 -----------------SLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVS 422
+ A + ET+AVN V LH L A + +
Sbjct: 230 CATTAPHHVAGTSTGAAAAASTAAAATGLEFHPDETLAVNCVMFLHNL-AGHDELAAFLK 288
Query: 423 SIKAMRPKIITIVEQEA 439
+KAM P ++TI E+EA
Sbjct: 289 WVKAMSPAVVTIAEREA 305
Score = 225 (84.3 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 65/191 (34%), Positives = 99/191 (51%)
Query: 389 LDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSIKAMRPKIITIVEQEANHNSPV--F 446
L+ P E T+AVN V LH L A + + +KAM P ++TI E+EA
Sbjct: 258 LEFHPDE--TLAVNCVMFLHNL-AGHDELAAFLKWVKAMSPAVVTIAEREAGGGGGGGDH 314
Query: 447 LD----RFTEALHYYSSLFDSLEGSGLTPPSQDQV-MSEVYLGRQICNIVACDGTDRNER 501
+D R A+ +YS++F++LE + + P S++++ + + LGR+I A G
Sbjct: 315 IDDLPRRVGVAMDHYSAVFEALEAT-VPPGSRERLAVEQEVLGREI---EAAVGPSGGRW 370
Query: 502 HETLTQWRTRLGSAGFEPVHLGSNAYKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPL 561
+ +W +AGF L + A QA +LL L +GY V+E G LGW TRPL
Sbjct: 371 WRGIERWGGAARAAGFAARPLSAFAVSQARLLLRLHYPSEGYLVQEARGACFLGWQTRPL 430
Query: 562 IATSAWQLAKS 572
++ SAWQ + S
Sbjct: 431 LSVSAWQPSSS 441
>TAIR|locus:2087994 [details] [associations]
symbol:AT3G13840 "AT3G13840" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB028610
InterPro:IPR005202 PROSITE:PS50985 IPI:IPI00544801
RefSeq:NP_188000.1 UniGene:At.64114 PaxDb:Q9LRW3 PRIDE:Q9LRW3
EnsemblPlants:AT3G13840.1 GeneID:820596 KEGG:ath:AT3G13840
GeneFarm:4262 TAIR:At3g13840 eggNOG:NOG262645 HOGENOM:HOG000240132
InParanoid:Q9LRW3 OMA:WFAFPNN PhylomeDB:Q9LRW3
ProtClustDB:CLSN2684819 Genevestigator:Q9LRW3 Uniprot:Q9LRW3
Length = 510
Score = 209 (78.6 bits), Expect = 9.5e-14, P = 9.5e-14
Identities = 92/387 (23%), Positives = 156/387 (40%)
Query: 198 DSQETGVQLVHTLMACAEAIQQENLKVADALVKHIGLLAAAQAGAMRKVATYFAEALARR 257
D + G L CA AI N + + LA++ A R++A + AL
Sbjct: 137 DGNKEGRWAEKLLNPCALAITASNSSRVQHYLCVLSELASSSGDANRRLAAFGLRALQHH 196
Query: 258 IYR------IYPQDCLDSSYNDILQ---MHFYETCPYLKFAHFTANQAILEAF----NNA 304
+ +P S+ + Q + FYE P+ + AN AIL+ +
Sbjct: 197 LSSSSVSSSFWPVFTFASAEVKMFQKTLLKFYEVSPWFALPNNMANSAILQILAQDPKDK 256
Query: 305 NRVHVIDFSLKQGMQWPALMQALALR-PGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQL 363
+H+ID + GMQWP L++AL+ R G PP R+T I D ++ G+
Sbjct: 257 KDLHIIDIGVSHGMQWPTLLEALSCRLEGPPPRVRITVISDLTADIPFSVGPPGYNYG-- 314
Query: 364 ADTIGVEFEFRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIE-KVVS 422
+ +G + + S+ D + ++D P E + V + F LH L + +
Sbjct: 315 SQLLGFARSLKINLQISVLD-KLQLIDTSPHE--NLIVCAQFRLHHLKHSINDERGETLK 371
Query: 423 SIKAMRPKIITIVEQEANHNSPV-FLDRFTEALHYYSSLFDSLEGSGLTPPSQDQVMSEV 481
+++++RPK + + E +S F F++ L Y DS S+++ + E
Sbjct: 372 AVRSLRPKGVVLCENNGECSSSADFAAGFSKKLEYVWKFLDSTSSGFKEENSEERKLMEG 431
Query: 482 YLGRQICNIVACDGTDRNERHETLTQWRTRLGSAGFEPVHLGSNAYKQASMLLALFAGGD 541
+ + N G D NE E +W R+ AGF +A A LL +
Sbjct: 432 EATKVLMNA----G-DMNEGKE---KWYERMREAGFFVEAFEEDAVDGAKSLLRKYDNNW 483
Query: 542 GYRVEENNGCLMLGWHTRPLIATSAWQ 568
R+E+ + L W + S W+
Sbjct: 484 EIRMEDGDTFAGLMWKGEAVSFCSLWK 510
>TAIR|locus:1009023400 [details] [associations]
symbol:AT5G67411 "AT5G67411" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 EMBL:AB007645
InterPro:IPR005202 PROSITE:PS50985 EMBL:DQ487622 IPI:IPI00657013
RefSeq:NP_001032167.1 UniGene:At.65711 EnsemblPlants:AT5G67411.1
GeneID:3771574 KEGG:ath:AT5G67411 TAIR:At5g67411 eggNOG:NOG309215
PhylomeDB:Q2V2T9 Genevestigator:Q2V2T9 Uniprot:Q2V2T9
Length = 202
Score = 145 (56.1 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 55/200 (27%), Positives = 96/200 (48%)
Query: 318 MQWPALMQALA--LRPGGPPAFRLTGIGP-----PQPDNTDALQQVGWKLAQLADTIGVE 370
MQ P L+ ++A L PP +LT I P P + +++G KL A T V
Sbjct: 1 MQIPTLIDSMANKLHKKPPPLLKLTVIASDAEFHPPPLLGISYEELGSKLVNFATTRNVA 60
Query: 371 FEFRGFVCNSLADLEPDMLD-IR-PPEV--ETVAVNSVFELHRLLAR--PGGIEKV-VSS 423
EFR + +S +D +++ +R P V E + VN LH + + V +
Sbjct: 61 MEFR-IISSSYSDGLSSLIEQLRIDPFVFNEALVVNCHMMLHYIPDEILTSNLRSVFLKE 119
Query: 424 IKAMRPKIITIVEQEANHNSPVFLDRFTEALHYYSSLFDSLEGSGLTPPSQDQVMSEVYL 483
++ + P I+T+++++++ S F+ R +Y +D+ E LT S+ + E +
Sbjct: 120 LRDLNPTIVTLIDEDSDFTSTNFISRLRSLYNYMWIPYDTAE-MFLTRGSEQRQWYEADI 178
Query: 484 GRQICNIVACDGTDRNERHE 503
+I N+VA +G +R ER E
Sbjct: 179 SWKIDNVVAKEGAERVERLE 198
>UNIPROTKB|Q1AHE4 [details] [associations]
symbol:SCL "SCARECROW-like protein" species:4081 "Solanum
lycopersicum" [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF03514 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:DQ087265 UniGene:Les.23827 Uniprot:Q1AHE4
Length = 71
Score = 123 (48.4 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 26/71 (36%), Positives = 38/71 (53%)
Query: 497 DRNERHETLTQWRTRLGSAGFEPVHLGSNAYKQASMLLALFAGGDGYRVEENNGCLMLGW 556
+R ERHE L +W+ R AGF L S L+ ++ + Y + E +G ++LGW
Sbjct: 2 ERVERHELLGKWKLRFTMAGFHQYPLSSYVNSVIKSLMRCYS--EHYTLVEKDGAMLLGW 59
Query: 557 HTRPLIATSAW 567
R LI+ SAW
Sbjct: 60 KKRNLISASAW 70
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 576 550 0.00097 119 3 11 22 0.41 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 622 (66 KB)
Total size of DFA: 317 KB (2162 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 47.44u 0.09s 47.53t Elapsed: 00:00:03
Total cpu time: 47.45u 0.09s 47.54t Elapsed: 00:00:03
Start: Tue May 21 07:11:56 2013 End: Tue May 21 07:11:59 2013