Query 008153
Match_columns 576
No_of_seqs 213 out of 739
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 19:24:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008153.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008153hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2zsh_B Della protein GAI; plan 100.0 5.9E-53 2E-57 364.9 5.3 103 26-161 7-110 (110)
2 4gek_A TRNA (CMO5U34)-methyltr 97.1 0.011 3.9E-07 58.7 15.3 170 306-522 71-242 (261)
3 3dtn_A Putative methyltransfer 94.9 0.12 4.2E-06 48.7 10.1 177 295-522 33-211 (234)
4 3bkx_A SAM-dependent methyltra 94.1 1.1 3.6E-05 43.3 14.8 129 295-444 33-167 (275)
5 4a6d_A Hydroxyindole O-methylt 93.6 0.38 1.3E-05 49.5 11.1 160 294-522 168-331 (353)
6 3dp7_A SAM-dependent methyltra 93.4 0.55 1.9E-05 48.2 11.9 117 296-439 170-290 (363)
7 2aot_A HMT, histamine N-methyl 93.3 0.23 7.8E-06 49.1 8.7 118 304-435 51-170 (292)
8 3dh0_A SAM dependent methyltra 93.1 2.6 8.8E-05 39.0 15.1 113 295-435 27-141 (219)
9 3mcz_A O-methyltransferase; ad 92.6 1.6 5.5E-05 44.0 14.0 116 296-438 169-289 (352)
10 2r3s_A Uncharacterized protein 92.3 1.7 5.9E-05 43.2 13.5 117 295-440 153-275 (335)
11 2ip2_A Probable phenazine-spec 91.9 1.5 5.1E-05 43.9 12.6 115 295-438 158-274 (334)
12 3mgg_A Methyltransferase; NYSG 91.0 1.3 4.4E-05 42.8 10.7 103 304-435 36-140 (276)
13 3dlc_A Putative S-adenosyl-L-m 90.1 4.5 0.00015 36.8 13.1 112 294-436 33-147 (219)
14 3i53_A O-methyltransferase; CO 90.0 2.4 8.2E-05 42.5 12.0 112 296-437 160-275 (332)
15 3gwz_A MMCR; methyltransferase 88.8 4.6 0.00016 41.4 13.3 117 294-440 191-311 (369)
16 3p9c_A Caffeic acid O-methyltr 88.7 1.1 3.6E-05 46.3 8.4 109 294-438 189-300 (364)
17 1qzz_A RDMB, aclacinomycin-10- 88.6 3.9 0.00013 41.5 12.5 113 295-437 172-288 (374)
18 3f4k_A Putative methyltransfer 88.5 3.4 0.00012 39.2 11.3 126 279-435 19-148 (257)
19 1xxl_A YCGJ protein; structura 88.4 17 0.00058 34.2 16.2 111 294-435 10-122 (239)
20 3htx_A HEN1; HEN1, small RNA m 88.3 1.7 5.9E-05 50.7 10.4 121 297-439 713-837 (950)
21 3h2b_A SAM-dependent methyltra 87.6 2.7 9.4E-05 38.4 9.7 97 306-435 42-139 (203)
22 3sm3_A SAM-dependent methyltra 87.5 2.3 8E-05 39.3 9.3 110 306-443 31-148 (235)
23 3ujc_A Phosphoethanolamine N-m 87.2 2.3 7.7E-05 40.3 9.1 122 285-435 35-157 (266)
24 1x19_A CRTF-related protein; m 86.3 7.7 0.00026 39.3 13.1 115 294-438 179-297 (359)
25 1vl5_A Unknown conserved prote 86.2 13 0.00043 35.4 13.9 109 296-435 28-138 (260)
26 4fsd_A Arsenic methyltransfera 85.4 9.2 0.00032 39.4 13.4 112 305-435 83-201 (383)
27 2qe6_A Uncharacterized protein 84.9 31 0.0011 33.8 16.4 131 279-435 47-194 (274)
28 3lst_A CALO1 methyltransferase 84.3 3.4 0.00012 41.9 9.3 44 295-345 174-217 (348)
29 3reo_A (ISO)eugenol O-methyltr 84.2 3.8 0.00013 42.1 9.7 109 294-438 191-302 (368)
30 4dcm_A Ribosomal RNA large sub 83.7 5 0.00017 41.8 10.4 119 293-436 210-333 (375)
31 3jwg_A HEN1, methyltransferase 83.2 3.2 0.00011 38.5 7.9 118 295-439 19-143 (219)
32 3e23_A Uncharacterized protein 83.0 6.6 0.00022 36.1 10.0 96 306-436 44-140 (211)
33 3vc1_A Geranyl diphosphate 2-C 82.9 8.9 0.0003 37.9 11.5 110 295-435 106-219 (312)
34 3jwh_A HEN1; methyltransferase 82.4 12 0.00042 34.4 11.7 116 296-438 20-142 (217)
35 3giw_A Protein of unknown func 81.9 19 0.00066 36.3 13.6 137 278-435 47-198 (277)
36 1xtp_A LMAJ004091AAA; SGPP, st 81.2 7 0.00024 36.7 9.6 115 293-436 81-196 (254)
37 3m70_A Tellurite resistance pr 80.5 12 0.0004 36.3 11.2 110 296-435 111-221 (286)
38 1dus_A MJ0882; hypothetical pr 79.1 13 0.00045 32.8 10.3 113 293-436 40-156 (194)
39 3l8d_A Methyltransferase; stru 78.4 17 0.00059 33.7 11.3 99 305-436 53-152 (242)
40 1fp2_A Isoflavone O-methyltran 78.0 11 0.00038 38.0 10.5 33 305-344 188-220 (352)
41 3bgv_A MRNA CAP guanine-N7 met 77.4 25 0.00087 34.5 12.8 115 305-435 34-153 (313)
42 2vdw_A Vaccinia virus capping 77.4 24 0.00082 35.3 12.7 110 306-435 49-167 (302)
43 3gu3_A Methyltransferase; alph 77.4 34 0.0012 33.2 13.5 103 304-435 21-124 (284)
44 3ofk_A Nodulation protein S; N 77.4 11 0.00039 34.5 9.6 110 296-435 42-152 (216)
45 1fp1_D Isoliquiritigenin 2'-O- 77.1 17 0.00058 37.0 11.7 44 294-344 197-241 (372)
46 1tw3_A COMT, carminomycin 4-O- 77.0 16 0.00055 36.7 11.3 114 295-438 173-290 (360)
47 3g5l_A Putative S-adenosylmeth 75.5 23 0.00079 33.3 11.4 113 292-436 31-144 (253)
48 3ccf_A Cyclopropane-fatty-acyl 75.5 24 0.00083 33.9 11.7 125 295-455 47-172 (279)
49 4e2x_A TCAB9; kijanose, tetron 74.1 3.3 0.00011 42.8 5.4 109 296-436 98-207 (416)
50 2o57_A Putative sarcosine dime 73.2 37 0.0013 32.7 12.5 114 295-438 68-189 (297)
51 3hem_A Cyclopropane-fatty-acyl 73.2 22 0.00076 34.7 11.0 112 295-435 62-181 (302)
52 2p35_A Trans-aconitate 2-methy 73.1 33 0.0011 32.1 11.8 107 296-436 24-131 (259)
53 3kkz_A Uncharacterized protein 72.8 18 0.00062 34.5 10.0 112 293-435 33-148 (267)
54 3hm2_A Precorrin-6Y C5,15-meth 72.0 24 0.00083 30.9 10.0 61 295-370 15-75 (178)
55 2xvm_A Tellurite resistance pr 71.8 34 0.0012 30.4 11.1 111 294-434 21-133 (199)
56 1ve3_A Hypothetical protein PH 71.3 29 0.00099 31.7 10.7 101 306-435 39-140 (227)
57 3dli_A Methyltransferase; PSI- 71.1 5.7 0.00019 37.5 5.9 96 306-435 42-138 (240)
58 3ocj_A Putative exported prote 71.1 17 0.00058 35.7 9.5 105 305-435 118-225 (305)
59 1y8c_A S-adenosylmethionine-de 70.9 21 0.0007 33.0 9.7 103 305-436 37-141 (246)
60 1wzn_A SAM-dependent methyltra 70.9 27 0.00091 32.8 10.6 111 297-437 33-145 (252)
61 3hnr_A Probable methyltransfer 70.8 11 0.00038 34.6 7.7 108 295-435 35-143 (220)
62 3g5t_A Trans-aconitate 3-methy 70.3 32 0.0011 33.5 11.3 111 304-435 35-147 (299)
63 3p9n_A Possible methyltransfer 68.4 21 0.00071 32.2 8.9 111 305-442 44-158 (189)
64 1kpg_A CFA synthase;, cyclopro 68.1 19 0.00063 34.8 9.0 110 295-435 54-166 (287)
65 1zg3_A Isoflavanone 4'-O-methy 67.6 19 0.00064 36.4 9.2 42 296-344 182-225 (358)
66 3g2m_A PCZA361.24; SAM-depende 65.7 15 0.00051 35.9 7.8 116 295-436 73-189 (299)
67 3ou2_A SAM-dependent methyltra 65.1 32 0.0011 31.1 9.6 108 294-435 34-144 (218)
68 3lcc_A Putative methyl chlorid 65.1 45 0.0015 31.0 10.7 101 307-435 68-169 (235)
69 3thr_A Glycine N-methyltransfe 64.3 13 0.00045 35.9 7.0 121 296-436 48-174 (293)
70 3uwp_A Histone-lysine N-methyl 64.2 33 0.0011 36.9 10.5 119 294-435 162-286 (438)
71 2yqz_A Hypothetical protein TT 63.3 71 0.0024 29.8 11.9 102 304-436 38-140 (263)
72 3i9f_A Putative type 11 methyl 63.0 37 0.0013 29.7 9.2 102 296-435 8-110 (170)
73 2p7i_A Hypothetical protein; p 61.6 28 0.00097 32.0 8.6 106 295-435 31-139 (250)
74 3bus_A REBM, methyltransferase 61.1 60 0.002 30.7 11.0 111 295-435 51-164 (273)
75 4htf_A S-adenosylmethionine-de 60.9 56 0.0019 31.3 10.8 109 297-436 61-172 (285)
76 3r0q_C Probable protein argini 60.0 24 0.00083 36.3 8.5 113 295-436 53-168 (376)
77 2g72_A Phenylethanolamine N-me 59.7 22 0.00075 34.5 7.7 44 305-360 71-114 (289)
78 1zs4_A Regulatory protein CII; 59.6 3.4 0.00012 34.7 1.6 24 42-65 52-75 (83)
79 3d2l_A SAM-dependent methyltra 59.2 56 0.0019 30.1 10.2 108 297-436 27-136 (243)
80 2yxd_A Probable cobalt-precorr 59.1 28 0.00094 30.4 7.6 103 296-435 26-129 (183)
81 3eey_A Putative rRNA methylase 58.7 54 0.0018 29.4 9.7 108 307-435 24-137 (197)
82 2qn6_B Translation initiation 58.6 5.5 0.00019 34.0 2.7 42 333-374 50-91 (93)
83 3fzg_A 16S rRNA methylase; met 58.4 36 0.0012 32.9 8.7 100 307-435 51-150 (200)
84 3pfg_A N-methyltransferase; N, 58.1 23 0.00079 33.6 7.5 98 306-436 51-150 (263)
85 3njr_A Precorrin-6Y methylase; 58.0 93 0.0032 28.6 11.5 103 296-435 46-152 (204)
86 3g07_A 7SK snRNA methylphospha 57.8 12 0.00039 37.0 5.4 56 296-362 35-92 (292)
87 1nkv_A Hypothetical protein YJ 56.7 53 0.0018 30.7 9.7 110 295-435 26-138 (256)
88 3mq2_A 16S rRNA methyltransfer 56.6 26 0.00089 32.2 7.3 117 296-436 18-139 (218)
89 2pjd_A Ribosomal RNA small sub 56.4 13 0.00044 37.6 5.6 117 293-436 184-302 (343)
90 3lcv_B Sisomicin-gentamicin re 55.1 78 0.0027 32.1 10.9 132 296-464 125-258 (281)
91 3q7e_A Protein arginine N-meth 54.6 25 0.00085 35.8 7.4 114 295-436 56-172 (349)
92 3u81_A Catechol O-methyltransf 54.3 25 0.00085 32.7 6.8 110 306-438 59-171 (221)
93 3e8s_A Putative SAM dependent 53.9 41 0.0014 30.4 8.2 44 292-344 39-82 (227)
94 2fpo_A Methylase YHHF; structu 53.6 39 0.0013 31.1 8.1 102 307-438 56-161 (202)
95 2zfu_A Nucleomethylin, cerebra 53.6 26 0.0009 32.0 6.8 38 296-345 57-95 (215)
96 3frh_A 16S rRNA methylase; met 52.5 46 0.0016 33.2 8.7 98 306-435 106-204 (253)
97 3cgg_A SAM-dependent methyltra 52.2 52 0.0018 28.9 8.3 108 296-436 38-146 (195)
98 3iv6_A Putative Zn-dependent a 51.9 19 0.00064 35.7 5.8 52 295-359 35-86 (261)
99 1uwv_A 23S rRNA (uracil-5-)-me 51.5 1.2E+02 0.0041 31.7 12.3 110 297-436 278-388 (433)
100 3ege_A Putative methyltransfer 50.5 71 0.0024 30.3 9.5 41 295-344 24-64 (261)
101 2esr_A Methyltransferase; stru 50.0 39 0.0013 29.8 7.1 107 305-441 31-142 (177)
102 3dmg_A Probable ribosomal RNA 49.2 87 0.003 32.4 10.6 105 305-436 233-339 (381)
103 2ift_A Putative methylase HI07 49.0 81 0.0028 28.9 9.4 106 307-441 55-167 (201)
104 2y1w_A Histone-arginine methyl 49.0 40 0.0014 34.2 7.8 114 294-436 39-154 (348)
105 2pxx_A Uncharacterized protein 48.4 56 0.0019 29.3 8.1 44 304-359 41-84 (215)
106 3mti_A RRNA methylase; SAM-dep 48.0 57 0.002 28.9 8.0 42 307-361 24-65 (185)
107 3bkw_A MLL3908 protein, S-aden 48.0 87 0.003 28.7 9.5 109 295-435 33-142 (243)
108 2ex4_A Adrenal gland protein A 47.0 94 0.0032 28.9 9.7 116 293-435 62-183 (241)
109 1xj5_A Spermidine synthase 1; 46.9 95 0.0032 31.6 10.3 135 306-462 121-257 (334)
110 3cc8_A Putative methyltransfer 45.5 77 0.0026 28.6 8.6 106 294-435 22-128 (230)
111 2gb4_A Thiopurine S-methyltran 45.4 82 0.0028 30.4 9.2 105 305-433 68-187 (252)
112 1yzh_A TRNA (guanine-N(7)-)-me 45.0 80 0.0028 28.9 8.7 110 305-437 41-156 (214)
113 3m33_A Uncharacterized protein 44.9 47 0.0016 30.9 7.1 30 306-344 49-78 (226)
114 3bwc_A Spermidine synthase; SA 44.4 90 0.0031 30.9 9.5 114 306-438 96-211 (304)
115 3e05_A Precorrin-6Y C5,15-meth 43.9 1.8E+02 0.0061 26.1 11.6 108 295-435 30-140 (204)
116 2a14_A Indolethylamine N-methy 43.0 1.5E+02 0.0052 28.1 10.7 39 397-435 156-195 (263)
117 2fk8_A Methoxy mycolic acid sy 42.7 1.1E+02 0.0039 29.7 9.9 110 295-435 80-192 (318)
118 2kw5_A SLR1183 protein; struct 42.3 1.8E+02 0.0063 25.8 11.6 98 308-436 32-130 (202)
119 4hg2_A Methyltransferase type 41.3 2.5E+02 0.0086 27.1 12.1 100 308-445 42-144 (257)
120 3b3j_A Histone-arginine methyl 40.9 53 0.0018 35.3 7.6 113 295-436 148-262 (480)
121 1ri5_A MRNA capping enzyme; me 40.1 1E+02 0.0036 29.2 8.9 107 305-436 64-173 (298)
122 1wy7_A Hypothetical protein PH 37.6 1.6E+02 0.0054 26.4 9.4 98 305-434 49-146 (207)
123 2p8j_A S-adenosylmethionine-de 37.1 1.4E+02 0.0048 26.6 8.9 102 306-435 24-126 (209)
124 2jjq_A Uncharacterized RNA met 36.1 1.9E+02 0.0064 30.4 10.8 95 307-436 292-386 (425)
125 2avn_A Ubiquinone/menaquinone 34.8 2.9E+02 0.0099 25.9 11.4 96 305-435 54-150 (260)
126 2efj_A 3,7-dimethylxanthine me 34.2 4.2E+02 0.014 27.6 14.3 102 306-414 53-166 (384)
127 2fyt_A Protein arginine N-meth 33.7 2.1E+02 0.0072 28.7 10.4 111 295-434 54-168 (340)
128 2ksn_A Ubiquitin domain-contai 33.7 47 0.0016 30.3 4.8 38 203-241 55-92 (137)
129 1inl_A Spermidine synthase; be 32.9 1.9E+02 0.0064 28.5 9.7 136 307-465 92-230 (296)
130 4azs_A Methyltransferase WBDD; 32.9 57 0.0019 35.5 6.3 83 305-412 66-149 (569)
131 3p2e_A 16S rRNA methylase; met 31.0 1.5E+02 0.0053 27.8 8.4 115 297-435 17-137 (225)
132 1g6q_1 HnRNP arginine N-methyl 31.0 1.5E+02 0.0051 29.5 8.7 113 295-435 28-143 (328)
133 2i62_A Nicotinamide N-methyltr 29.8 1.5E+02 0.0052 27.5 8.0 47 302-360 53-99 (265)
134 2o07_A Spermidine synthase; st 29.7 1.5E+02 0.0053 29.4 8.5 136 307-465 97-234 (304)
135 2gs9_A Hypothetical protein TT 29.4 1.8E+02 0.0062 26.1 8.3 101 296-435 28-130 (211)
136 3bxo_A N,N-dimethyltransferase 29.3 2.5E+02 0.0085 25.5 9.4 101 304-436 39-140 (239)
137 3grz_A L11 mtase, ribosomal pr 28.4 90 0.0031 28.1 6.0 67 292-374 45-114 (205)
138 1iy9_A Spermidine synthase; ro 27.5 1.6E+02 0.0055 28.7 8.0 137 306-465 76-214 (275)
139 1l3i_A Precorrin-6Y methyltran 27.0 1.1E+02 0.0038 26.5 6.2 52 296-360 24-75 (192)
140 2i7c_A Spermidine synthase; tr 27.0 1.1E+02 0.0037 30.0 6.6 133 307-464 80-216 (283)
141 1u2z_A Histone-lysine N-methyl 26.8 2.8E+02 0.0096 29.4 10.2 118 295-435 232-357 (433)
142 2j66_A BTRK, decarboxylase; bu 26.6 2.4E+02 0.0081 29.1 9.6 66 305-374 133-223 (428)
143 3q87_B N6 adenine specific DNA 26.3 1.6E+02 0.0055 26.0 7.2 28 307-344 25-52 (170)
144 2yxe_A Protein-L-isoaspartate 25.3 1.2E+02 0.0042 27.4 6.4 56 296-361 68-123 (215)
145 2b2c_A Spermidine synthase; be 25.0 1.1E+02 0.0037 30.8 6.3 134 307-464 110-246 (314)
146 3tva_A Xylose isomerase domain 24.9 66 0.0023 30.8 4.6 52 416-467 239-290 (290)
147 4dzr_A Protein-(glutamine-N5) 24.9 51 0.0017 29.5 3.6 42 296-344 20-62 (215)
148 3adn_A Spermidine synthase; am 24.2 4.3E+02 0.015 26.0 10.6 137 306-465 84-223 (294)
149 2pt6_A Spermidine synthase; tr 24.0 1.3E+02 0.0044 30.2 6.7 134 307-464 118-254 (321)
150 3lbf_A Protein-L-isoaspartate 23.1 3E+02 0.01 24.6 8.5 105 296-436 68-173 (210)
151 2ozv_A Hypothetical protein AT 23.1 3.2E+02 0.011 26.0 9.1 126 297-437 27-170 (260)
152 1yz7_A Probable translation in 23.0 45 0.0015 31.8 2.9 43 333-375 133-175 (188)
153 1o9g_A RRNA methyltransferase; 21.5 1.2E+02 0.004 28.6 5.5 56 297-361 43-98 (250)
154 3g89_A Ribosomal RNA small sub 21.2 1.1E+02 0.0037 29.4 5.2 102 304-435 79-182 (249)
155 1ws6_A Methyltransferase; stru 21.0 1.5E+02 0.0053 25.3 5.8 106 306-440 42-150 (171)
156 4hc4_A Protein arginine N-meth 20.8 1.5E+02 0.005 30.9 6.5 100 308-434 86-186 (376)
157 2kl8_A OR15; structural genomi 20.5 1.5E+02 0.0051 23.8 4.9 34 335-374 42-75 (85)
158 3evz_A Methyltransferase; NYSG 20.0 4.8E+02 0.016 23.5 9.4 54 305-374 55-109 (230)
No 1
>2zsh_B Della protein GAI; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_B*
Probab=100.00 E-value=5.9e-53 Score=364.86 Aligned_cols=103 Identities=60% Similarity=0.911 Sum_probs=58.9
Q ss_pred CCccccchhhhh-ccCCchhhhhhcCCccccccHHHHHHHHHHHHHHhccccccccccccccccccCCCchhhHHHHhhh
Q 008153 26 NANKAKMWEEEQ-DTGGMDELLEVLGYKVRSSEMADVAQKLEQLEMVMGTAQEDGISHLATDTVHYNPSDVSGWVQSMLE 104 (576)
Q Consensus 26 ~~~~~~~~~~~~-~~~~~d~~la~~gykv~ssd~~~vaqkle~le~~m~~~~~d~~s~lasdtvhynpsdls~w~~sml~ 104 (576)
.++|+|||+++. +++||||||||+|||||||||+||||||||||+|||++|+||+|||||||||||||||++||||||+
T Consensus 7 ~~~k~k~w~~~~~~~~g~DelLA~lGYkVrsSDma~vAQkLEqLE~vmg~a~~dgls~LasDTVHyNPSDLs~WvesMLs 86 (110)
T 2zsh_B 7 PQDKKTMMMNEEDDGNGMDELLAVLGYKVRSSEMADVAQKLEQLEVMMSNVQEDDLSQLATETVHYNPAELYTWLDSMLT 86 (110)
T ss_dssp ----------------CBCHHHHTTTCBCBGGGHHHHHHHHHHHHHHHTTC-------CHHHHTTSCTTBHHHHHHHHHH
T ss_pred CCchhhhccccccccccHHHHHHHcCccccchhHHHHHHHHHHHHHHHccccchhHHHhhhhhhcCChHHHHHHHHHHHH
Confidence 378999998643 7999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCCCcccccccccccCCCCccccCCCccccccCCCCCCCCCC
Q 008153 105 GLNNTGFDSQARPIQDPAESSTVNSILGQQTSNQSRIFNDDSEYDLRAIPGSAAYPQ 161 (576)
Q Consensus 105 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~ipg~a~~~~ 161 (576)
||||+. ++++||||||||+|+|++
T Consensus 87 Eln~~~---------------------------------~~~~ydL~aIpg~a~y~~ 110 (110)
T 2zsh_B 87 DLNPPS---------------------------------SNAEYDLKAIPGDAILNQ 110 (110)
T ss_dssp TC-------------------------------------------------------
T ss_pred HcCCCC---------------------------------CccccchhcCCcccccCC
Confidence 999751 134599999999999974
No 2
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=97.05 E-value=0.011 Score=58.70 Aligned_cols=170 Identities=14% Similarity=0.173 Sum_probs=89.9
Q ss_pred eeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEeeeecCCCCCCC
Q 008153 306 RVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRGFVCNSLADLE 385 (576)
Q Consensus 306 ~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~~v~~~~ledl~ 385 (576)
.-+|+|+|.|.|. +...|+.+- ++|..+||||+. +...|+...+++.++. ...+.+|.. ..+.++.
T Consensus 71 ~~~vLDlGcGtG~----~~~~la~~~-~~~~~~v~gvD~----s~~ml~~A~~~~~~~~--~~~~v~~~~---~D~~~~~ 136 (261)
T 4gek_A 71 GTQVYDLGCSLGA----ATLSVRRNI-HHDNCKIIAIDN----SPAMIERCRRHIDAYK--APTPVDVIE---GDIRDIA 136 (261)
T ss_dssp TCEEEEETCTTTH----HHHHHHHTC-CSSSCEEEEEES----CHHHHHHHHHHHHTSC--CSSCEEEEE---SCTTTCC
T ss_pred CCEEEEEeCCCCH----HHHHHHHhc-CCCCCEEEEEEC----CHHHHHHHHHHHHhhc--cCceEEEee---ccccccc
Confidence 3479999999985 555666553 346789999994 4566776666665432 223445542 2333332
Q ss_pred ccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEE-EecCCCCCCchhHHHHHHHHHHHHHHhhh
Q 008153 386 PDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITI-VEQEANHNSPVFLDRFTEALHYYSSLFDS 463 (576)
Q Consensus 386 ~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtl-vEqeanhNsp~F~~RF~EAL~yYsalFDS 463 (576)
.. +-.+++ |.+.||++.. ..+..+|+.| |.|+|.-+.+ .|.-.. ..+.+...+.+..+.| .....
T Consensus 137 -----~~--~~d~v~--~~~~l~~~~~--~~~~~~l~~i~~~LkpGG~lii~e~~~~-~~~~~~~~~~~~~~~~-~~~~g 203 (261)
T 4gek_A 137 -----IE--NASMVV--LNFTLQFLEP--SERQALLDKIYQGLNPGGALVLSEKFSF-EDAKVGELLFNMHHDF-KRANG 203 (261)
T ss_dssp -----CC--SEEEEE--EESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEEEBCC-SSHHHHHHHHHHHHHH-HHHTT
T ss_pred -----cc--ccccce--eeeeeeecCc--hhHhHHHHHHHHHcCCCcEEEEEeccCC-CCHHHHHHHHHHHHHH-HHHcC
Confidence 11 113444 4456788743 3456778776 6789987655 454332 2233333333221111 11110
Q ss_pred hhccCCCCCcHHHHHHHHHhhcccchhhcccCCCCcccccchhhHHHHHhcCCCccccC
Q 008153 464 LEGSGLTPPSQDQVMSEVYLGRQICNIVACDGTDRNERHETLTQWRTRLGSAGFEPVHL 522 (576)
Q Consensus 464 Lea~~~~~~s~~r~~~E~~lgreI~NiVAcEG~eRvERhE~~~qWr~Rm~~AGF~pv~l 522 (576)
+... .-...+. .+.| +-++.+.+.++.+|+.|||+.|.+
T Consensus 204 ~s~~---ei~~~~~--------~l~~---------~~~~~s~~~~~~~L~~AGF~~ve~ 242 (261)
T 4gek_A 204 YSEL---EISQKRS--------MLEN---------VMLTDSVETHKARLHKAGFEHSEL 242 (261)
T ss_dssp GGGS---TTHHHHH--------HHHH---------HCCCBCHHHHHHHHHHHTCSEEEE
T ss_pred CCHH---HHHHHHh--------hhcc---------cccCCCHHHHHHHHHHcCCCeEEE
Confidence 0000 0001111 1112 234557788999999999997753
No 3
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=94.92 E-value=0.12 Score=48.74 Aligned_cols=177 Identities=12% Similarity=0.143 Sum_probs=90.6
Q ss_pred HHHHHhhc-cCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEE
Q 008153 295 QAILEAFN-NANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEF 373 (576)
Q Consensus 295 qAILEA~~-g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF 373 (576)
+.+++.+. ..+.-.|+|+|.|.|. +...|+.+- |..++|||+. +...++...+++ +..+ ..+|
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~----~~~~l~~~~---~~~~v~~vD~----s~~~~~~a~~~~----~~~~-~~~~ 96 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGL----LSAFLMEKY---PEATFTLVDM----SEKMLEIAKNRF----RGNL-KVKY 96 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSH----HHHHHHHHC---TTCEEEEEES----CHHHHHHHHHHT----CSCT-TEEE
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCH----HHHHHHHhC---CCCeEEEEEC----CHHHHHHHHHhh----ccCC-CEEE
Confidence 56666665 4556899999999985 344444432 4579999984 334454443332 2222 3344
Q ss_pred eeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEEecCCCCCCchhHHHHHH
Q 008153 374 RGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIVEQEANHNSPVFLDRFTE 452 (576)
Q Consensus 374 ~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlvEqeanhNsp~F~~RF~E 452 (576)
.. ..+.++... + ..=+|-|...||++.+ .....+|+.+ +-|+|.-++++-.-...+.+.+...+..
T Consensus 97 ~~---~d~~~~~~~------~--~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~ 163 (234)
T 3dtn_A 97 IE---ADYSKYDFE------E--KYDMVVSALSIHHLED--EDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKT 163 (234)
T ss_dssp EE---SCTTTCCCC------S--CEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHH
T ss_pred Ee---CchhccCCC------C--CceEEEEeCccccCCH--HHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHH
Confidence 32 233333221 1 3334444467888832 2234566655 6689987666432222333333333332
Q ss_pred HHHHHHHHhhhhhccCCCCCcHHHHHHHHHhhcccchhhcccCCCCcccccchhhHHHHHhcCCCccccC
Q 008153 453 ALHYYSSLFDSLEGSGLTPPSQDQVMSEVYLGRQICNIVACDGTDRNERHETLTQWRTRLGSAGFEPVHL 522 (576)
Q Consensus 453 AL~yYsalFDSLea~~~~~~s~~r~~~E~~lgreI~NiVAcEG~eRvERhE~~~qWr~Rm~~AGF~pv~l 522 (576)
.+ ...+. ... -... +|.+..... ...+.-+...|+..|+.|||+.+.+
T Consensus 164 ~~---~~~~~---~~~---~~~~----------~~~~~~~~~---~~~~~~~~~~~~~ll~~aGF~~v~~ 211 (234)
T 3dtn_A 164 IW---RQYVE---NSG---LTEE----------EIAAGYERS---KLDKDIEMNQQLNWLKEAGFRDVSC 211 (234)
T ss_dssp HH---HHHHH---TSS---CCHH----------HHHTTC-------CCCCCBHHHHHHHHHHTTCEEEEE
T ss_pred HH---HHHHH---hcC---CCHH----------HHHHHHHhc---ccccccCHHHHHHHHHHcCCCceee
Confidence 21 11111 111 1111 111111111 2445567789999999999998764
No 4
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=94.06 E-value=1.1 Score=43.25 Aligned_cols=129 Identities=18% Similarity=0.154 Sum_probs=67.4
Q ss_pred HHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCC--CChHHHHHHHHHHHHHHhHcCc--e
Q 008153 295 QAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQP--DNTDALQQVGWKLAQLADTIGV--E 370 (576)
Q Consensus 295 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~--~~~~~L~etG~rL~~fA~slgV--p 370 (576)
..|++.+.-...-+|+|+|.|.|.- ...|+.+- .|..++|||++... +....++...+++. ..++ .
T Consensus 33 ~~l~~~~~~~~~~~vLDiGcG~G~~----~~~l~~~~--g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~----~~~~~~~ 102 (275)
T 3bkx_A 33 LAIAEAWQVKPGEKILEIGCGQGDL----SAVLADQV--GSSGHVTGIDIASPDYGAPLTLGQAWNHLL----AGPLGDR 102 (275)
T ss_dssp HHHHHHHTCCTTCEEEEESCTTSHH----HHHHHHHH--CTTCEEEEECSSCTTCCSSSCHHHHHHHHH----TSTTGGG
T ss_pred HHHHHHcCCCCCCEEEEeCCCCCHH----HHHHHHHh--CCCCEEEEEECCccccccHHHHHHHHHHHH----hcCCCCc
Confidence 3566766555566899999998863 33344331 24468999996431 00013444444433 2333 2
Q ss_pred eEEeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHHHhcCC--cEEEEEecCCCCCCc
Q 008153 371 FEFRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSIKAMRP--KIITIVEQEANHNSP 444 (576)
Q Consensus 371 FeF~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~Ir~L~P--kIvtlvEqeanhNsp 444 (576)
.+|.. .+ ++....+....+.-.+++.+ ..||++.+ .+.+++.++.+.| ..+++.+.....+.+
T Consensus 103 v~~~~--~d---~~~~~~~~~~~~~fD~v~~~--~~l~~~~~----~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~ 167 (275)
T 3bkx_A 103 LTVHF--NT---NLSDDLGPIADQHFDRVVLA--HSLWYFAS----ANALALLFKNMAAVCDHVDVAEWSMQPTAL 167 (275)
T ss_dssp EEEEC--SC---CTTTCCGGGTTCCCSEEEEE--SCGGGSSC----HHHHHHHHHHHTTTCSEEEEEEECSSCSSG
T ss_pred eEEEE--CC---hhhhccCCCCCCCEEEEEEc--cchhhCCC----HHHHHHHHHHHhCCCCEEEEEEecCCCCch
Confidence 44442 11 11111122222211344444 45677643 3458899999887 566666766554443
No 5
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=93.56 E-value=0.38 Score=49.49 Aligned_cols=160 Identities=20% Similarity=0.348 Sum_probs=86.4
Q ss_pred HHHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEE
Q 008153 294 NQAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEF 373 (576)
Q Consensus 294 NqAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF 373 (576)
.+.|++++.-...-+|+|+|-+.|. +..+|+++ =|.+|+|..+.| ..++...+++ +.+ ..=..+|
T Consensus 168 ~~~~~~~~~~~~~~~v~DvGgG~G~----~~~~l~~~---~p~~~~~~~dlp-----~v~~~a~~~~-~~~--~~~rv~~ 232 (353)
T 4a6d_A 168 GRSVLTAFDLSVFPLMCDLGGGAGA----LAKECMSL---YPGCKITVFDIP-----EVVWTAKQHF-SFQ--EEEQIDF 232 (353)
T ss_dssp HHHHHHSSCGGGCSEEEEETCTTSH----HHHHHHHH---CSSCEEEEEECH-----HHHHHHHHHS-CC----CCSEEE
T ss_pred HHHHHHhcCcccCCeEEeeCCCCCH----HHHHHHHh---CCCceeEeccCH-----HHHHHHHHhh-hhc--ccCceee
Confidence 4678888765555689999999996 55566654 267899988854 2343333222 111 1112444
Q ss_pred eeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcE-EEEEecCCCC--CCchhHHH
Q 008153 374 RGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKI-ITIVEQEANH--NSPVFLDR 449 (576)
Q Consensus 374 ~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkI-vtlvEqeanh--Nsp~F~~R 449 (576)
.. .+-+++ .+ + +..++... .-||...+ .....+|+.+ +.|+|.- ++++|.-.+. +.|.+.
T Consensus 233 ~~--gD~~~~------~~-~-~~D~~~~~--~vlh~~~d--~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~-- 296 (353)
T 4a6d_A 233 QE--GDFFKD------PL-P-EADLYILA--RVLHDWAD--GKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLT-- 296 (353)
T ss_dssp EE--SCTTTS------CC-C-CCSEEEEE--SSGGGSCH--HHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHH--
T ss_pred ec--CccccC------CC-C-CceEEEee--eecccCCH--HHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHH--
Confidence 43 111111 11 1 12344444 44787644 2345667766 6799975 4556654332 222211
Q ss_pred HHHHHHHHHHHhhhhhccCCCCCcHHHHHHHHHhhcccchhhcccCCCCcccccchhhHHHHHhcCCCccccC
Q 008153 450 FTEALHYYSSLFDSLEGSGLTPPSQDQVMSEVYLGRQICNIVACDGTDRNERHETLTQWRTRLGSAGFEPVHL 522 (576)
Q Consensus 450 F~EAL~yYsalFDSLea~~~~~~s~~r~~~E~~lgreI~NiVAcEG~eRvERhE~~~qWr~Rm~~AGF~pv~l 522 (576)
++||- .+ .+.+.|.+| +..+|+..+++|||+.+.+
T Consensus 297 ---------~~~dl----------------~m--------l~~~~g~er-----t~~e~~~ll~~AGf~~v~v 331 (353)
T 4a6d_A 297 ---------QLYSL----------------NM--------LVQTEGQER-----TPTHYHMLLSSAGFRDFQF 331 (353)
T ss_dssp ---------HHHHH----------------HH--------HHSSSCCCC-----CHHHHHHHHHHHTCEEEEE
T ss_pred ---------HHHHH----------------HH--------HHhCCCcCC-----CHHHHHHHHHHCCCceEEE
Confidence 11110 01 123346555 4579999999999998765
No 6
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=93.38 E-value=0.55 Score=48.24 Aligned_cols=117 Identities=13% Similarity=0.127 Sum_probs=62.3
Q ss_pred HHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCc--eeEE
Q 008153 296 AILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGV--EFEF 373 (576)
Q Consensus 296 AILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgV--pFeF 373 (576)
.+++.+.....-+|+|+|-|.|. +...|+.+- |.+++|+++.| ..++...+++ +..|+ ..+|
T Consensus 170 ~~l~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-----~~~~~a~~~~----~~~~~~~~v~~ 233 (363)
T 3dp7_A 170 KALEIVFSHHPKRLLDIGGNTGK----WATQCVQYN---KEVEVTIVDLP-----QQLEMMRKQT----AGLSGSERIHG 233 (363)
T ss_dssp HHHHHHGGGCCSEEEEESCTTCH----HHHHHHHHS---TTCEEEEEECH-----HHHHHHHHHH----TTCTTGGGEEE
T ss_pred HHHHHhcccCCCEEEEeCCCcCH----HHHHHHHhC---CCCEEEEEeCH-----HHHHHHHHHH----HhcCcccceEE
Confidence 34555444556799999999986 444555441 55799999842 3444433333 33443 3555
Q ss_pred eeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEE-EEecCC
Q 008153 374 RGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIIT-IVEQEA 439 (576)
Q Consensus 374 ~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvt-lvEqea 439 (576)
..- ...+... .+ ++.-.+++.+ .-||++.+ .....+|+.+ +.|+|.-.+ ++|.-.
T Consensus 234 ~~~---d~~~~~~-~~---p~~~D~v~~~--~vlh~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~~~ 290 (363)
T 3dp7_A 234 HGA---NLLDRDV-PF---PTGFDAVWMS--QFLDCFSE--EEVISILTRVAQSIGKDSKVYIMETLW 290 (363)
T ss_dssp EEC---CCCSSSC-CC---CCCCSEEEEE--SCSTTSCH--HHHHHHHHHHHHHCCTTCEEEEEECCT
T ss_pred EEc---cccccCC-CC---CCCcCEEEEe--chhhhCCH--HHHHHHHHHHHHhcCCCcEEEEEeecc
Confidence 431 2222110 01 1111355544 34677643 2345677766 668997655 455433
No 7
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=93.34 E-value=0.23 Score=49.14 Aligned_cols=118 Identities=7% Similarity=0.084 Sum_probs=64.2
Q ss_pred CCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEeeeecCCCCC
Q 008153 304 ANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRGFVCNSLAD 383 (576)
Q Consensus 304 ~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~~v~~~~led 383 (576)
....+|+|+|-|.|.--..++..|+.+..+ -.+.+|||++ +...++...+++.+...--++.|+|... ..++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~-~~v~~~~vD~----S~~ml~~a~~~~~~~~~~~~v~~~~~~~---~~~~ 122 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPG-VCINNEVVEP----SAEQIAKYKELVAKTSNLENVKFAWHKE---TSSE 122 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTT-CEEEEEEECS----CHHHHHHHHHHHHTCSSCTTEEEEEECS---CHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCC-ceeeEEEEeC----CHHHHHHHHHHHHhccCCCcceEEEEec---chhh
Confidence 456799999999995444567777654211 1234599995 3455655554443211112456666542 1222
Q ss_pred CCcc-ccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEE
Q 008153 384 LEPD-MLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIV 435 (576)
Q Consensus 384 l~~~-~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlv 435 (576)
+... ..... ++..=+|-|.+.||++.+ .+.+|+.+ |-|+|.-.+++
T Consensus 123 ~~~~~~~~~~--~~~fD~V~~~~~l~~~~d----~~~~l~~~~r~LkpgG~l~i 170 (292)
T 2aot_A 123 YQSRMLEKKE--LQKWDFIHMIQMLYYVKD----IPATLKFFHSLLGTNAKMLI 170 (292)
T ss_dssp HHHHHHTTTC--CCCEEEEEEESCGGGCSC----HHHHHHHHHHTEEEEEEEEE
T ss_pred hhhhhccccC--CCceeEEEEeeeeeecCC----HHHHHHHHHHHcCCCcEEEE
Confidence 2100 00011 123556667778999854 45667766 55699865553
No 8
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=93.09 E-value=2.6 Score=38.96 Aligned_cols=113 Identities=14% Similarity=0.216 Sum_probs=64.7
Q ss_pred HHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCce-eEE
Q 008153 295 QAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVE-FEF 373 (576)
Q Consensus 295 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVp-FeF 373 (576)
+.|++.+.-...-.|+|+|.|.|.--..|.+.. +|..++|||+. +...++...+++. ..+++ ++|
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~------~~~~~v~~vD~----s~~~~~~a~~~~~----~~~~~~~~~ 92 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMV------GEKGKVYAIDV----QEEMVNYAWEKVN----KLGLKNVEV 92 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHH------TTTCEEEEEES----CHHHHHHHHHHHH----HHTCTTEEE
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHh------CCCcEEEEEEC----CHHHHHHHHHHHH----HcCCCcEEE
Confidence 567777765566689999999997444444433 35569999984 3455655544443 33443 444
Q ss_pred eeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEE
Q 008153 374 RGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIV 435 (576)
Q Consensus 374 ~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlv 435 (576)
.. ..+.++. ... +..=+|-+...+|++.+ ...+|+.+ +-|+|.-++++
T Consensus 93 ~~---~d~~~~~-----~~~--~~fD~v~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~i 141 (219)
T 3dh0_A 93 LK---SEENKIP-----LPD--NTVDFIFMAFTFHELSE----PLKFLEELKRVAKPFAYLAI 141 (219)
T ss_dssp EE---CBTTBCS-----SCS--SCEEEEEEESCGGGCSS----HHHHHHHHHHHEEEEEEEEE
T ss_pred Ee---cccccCC-----CCC--CCeeEEEeehhhhhcCC----HHHHHHHHHHHhCCCeEEEE
Confidence 43 1222222 111 12334444566787732 35555554 67899866654
No 9
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=92.63 E-value=1.6 Score=43.99 Aligned_cols=116 Identities=15% Similarity=0.104 Sum_probs=64.8
Q ss_pred HHHHhhccCC-eeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCc--eeE
Q 008153 296 AILEAFNNAN-RVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGV--EFE 372 (576)
Q Consensus 296 AILEA~~g~~-~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgV--pFe 372 (576)
.|++.+.-.+ ..+|+|+|-|.|. +...|+.+- |.+++|+++.| ..++...+++ +..++ ..+
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-----~~~~~a~~~~----~~~~~~~~v~ 232 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGT----YLAQVLRRH---PQLTGQIWDLP-----TTRDAARKTI----HAHDLGGRVE 232 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCH----HHHHHHHHC---TTCEEEEEECG-----GGHHHHHHHH----HHTTCGGGEE
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCH----HHHHHHHhC---CCCeEEEEECH-----HHHHHHHHHH----HhcCCCCceE
Confidence 6777776555 7899999999996 445555432 45899999863 2344333333 33343 255
Q ss_pred EeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEE-EecC
Q 008153 373 FRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITI-VEQE 438 (576)
Q Consensus 373 F~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtl-vEqe 438 (576)
|..- .+.+..+ + . ++ .+=+|-+..-||++.+ .....+|+.+ +.|+|.-.++ +|.-
T Consensus 233 ~~~~---d~~~~~~--~-~-~~--~~D~v~~~~vlh~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~~ 289 (352)
T 3mcz_A 233 FFEK---NLLDARN--F-E-GG--AADVVMLNDCLHYFDA--REAREVIGHAAGLVKPGGALLILTMT 289 (352)
T ss_dssp EEEC---CTTCGGG--G-T-TC--CEEEEEEESCGGGSCH--HHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EEeC---CcccCcc--c-C-CC--CccEEEEecccccCCH--HHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 5432 2222110 0 1 11 2334445556788743 2346677766 6789976554 4543
No 10
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=92.30 E-value=1.7 Score=43.25 Aligned_cols=117 Identities=19% Similarity=0.185 Sum_probs=66.1
Q ss_pred HHHHHhhcc--CCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCce--
Q 008153 295 QAILEAFNN--ANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVE-- 370 (576)
Q Consensus 295 qAILEA~~g--~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVp-- 370 (576)
..|++.+.. .+..+|+|+|-+.|. +...|+.+. |..++|+++. + ..++...+++. ..|++
T Consensus 153 ~~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~----~-~~~~~a~~~~~----~~~~~~~ 216 (335)
T 2r3s_A 153 QLIAQLVNENKIEPLKVLDISASHGL----FGIAVAQHN---PNAEIFGVDW----A-SVLEVAKENAR----IQGVASR 216 (335)
T ss_dssp HHHHHHHTC--CCCSEEEEETCTTCH----HHHHHHHHC---TTCEEEEEEC----H-HHHHHHHHHHH----HHTCGGG
T ss_pred HHHHHhcccccCCCCEEEEECCCcCH----HHHHHHHHC---CCCeEEEEec----H-HHHHHHHHHHH----hcCCCcc
Confidence 467777765 667899999999995 444555442 4579999984 2 44555444443 33442
Q ss_pred eEEeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcE-EEEEecCCC
Q 008153 371 FEFRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKI-ITIVEQEAN 440 (576)
Q Consensus 371 FeF~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkI-vtlvEqean 440 (576)
.+|... ++.+.. + ++ ..=+|-|..-||++.+ .....+|+.+ +.|+|.- ++++|....
T Consensus 217 v~~~~~---d~~~~~-----~-~~--~~D~v~~~~~l~~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 217 YHTIAG---SAFEVD-----Y-GN--DYDLVLLPNFLHHFDV--ATCEQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp EEEEES---CTTTSC-----C-CS--CEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred eEEEec---ccccCC-----C-CC--CCcEEEEcchhccCCH--HHHHHHHHHHHHhCCCCcEEEEEeecCC
Confidence 555532 222211 1 11 2333444456787632 2345666665 6689987 555665443
No 11
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=91.89 E-value=1.5 Score=43.89 Aligned_cols=115 Identities=14% Similarity=0.126 Sum_probs=60.1
Q ss_pred HHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEe
Q 008153 295 QAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFR 374 (576)
Q Consensus 295 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~ 374 (576)
+.|++.+.-.. .+|+|+|-+.|. +...|+.+. |.+++|+++.| .. ++...+++.+.- +.-.++|.
T Consensus 158 ~~~~~~~~~~~-~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~--~~---~~~a~~~~~~~~--~~~~v~~~ 222 (334)
T 2ip2_A 158 HEIPRLLDFRG-RSFVDVGGGSGE----LTKAILQAE---PSARGVMLDRE--GS---LGVARDNLSSLL--AGERVSLV 222 (334)
T ss_dssp HHHHHHSCCTT-CEEEEETCTTCH----HHHHHHHHC---TTCEEEEEECT--TC---THHHHHHTHHHH--HTTSEEEE
T ss_pred HHHHHhCCCCC-CEEEEeCCCchH----HHHHHHHHC---CCCEEEEeCcH--HH---HHHHHHHHhhcC--CCCcEEEe
Confidence 56777764344 899999999995 444455442 45799999973 22 333333333221 11124454
Q ss_pred eeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEE-EecC
Q 008153 375 GFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITI-VEQE 438 (576)
Q Consensus 375 ~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtl-vEqe 438 (576)
.- ++.+ + +. . .-.+++.+ ..||++.+ .....+|+.+ +.|+|.-.++ +|.-
T Consensus 223 ~~---d~~~--~--~~-~--~~D~v~~~--~vl~~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~~ 274 (334)
T 2ip2_A 223 GG---DMLQ--E--VP-S--NGDIYLLS--RIIGDLDE--AASLRLLGNCREAMAGDGRVVVIERT 274 (334)
T ss_dssp ES---CTTT--C--CC-S--SCSEEEEE--SCGGGCCH--HHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred cC---CCCC--C--CC-C--CCCEEEEc--hhccCCCH--HHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 31 2222 1 11 1 11344444 45677632 2334677766 6679975544 5543
No 12
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=91.03 E-value=1.3 Score=42.75 Aligned_cols=103 Identities=18% Similarity=0.244 Sum_probs=57.0
Q ss_pred CCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCce-eEEeeeecCCCC
Q 008153 304 ANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVE-FEFRGFVCNSLA 382 (576)
Q Consensus 304 ~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVp-FeF~~v~~~~le 382 (576)
...-+|+|+|-|.|. +...|+.+ .|..++|||+. +...++....++ +..+++ .+|.. ..+.
T Consensus 36 ~~~~~vLDiG~G~G~----~~~~l~~~---~~~~~v~~vD~----s~~~~~~a~~~~----~~~~~~~~~~~~---~d~~ 97 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGA----QTVILAKN---NPDAEITSIDI----SPESLEKARENT----EKNGIKNVKFLQ---ANIF 97 (276)
T ss_dssp CTTCEEEETTCTTSH----HHHHHHHH---CTTSEEEEEES----CHHHHHHHHHHH----HHTTCCSEEEEE---CCGG
T ss_pred CCCCeEEEecCCCCH----HHHHHHHh---CCCCEEEEEEC----CHHHHHHHHHHH----HHcCCCCcEEEE---cccc
Confidence 345689999999885 44455544 23469999984 344454443333 334442 44442 1222
Q ss_pred CCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEE
Q 008153 383 DLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIV 435 (576)
Q Consensus 383 dl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlv 435 (576)
++. ... +..=+|-+...||++.+ .+.+|+.+ +-|+|.-++++
T Consensus 98 ~~~-----~~~--~~fD~v~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~~ 140 (276)
T 3mgg_A 98 SLP-----FED--SSFDHIFVCFVLEHLQS----PEEALKSLKKVLKPGGTITV 140 (276)
T ss_dssp GCC-----SCT--TCEEEEEEESCGGGCSC----HHHHHHHHHHHEEEEEEEEE
T ss_pred cCC-----CCC--CCeeEEEEechhhhcCC----HHHHHHHHHHHcCCCcEEEE
Confidence 221 111 23444555566788743 34666655 66899866654
No 13
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=90.12 E-value=4.5 Score=36.82 Aligned_cols=112 Identities=13% Similarity=0.140 Sum_probs=64.9
Q ss_pred HHHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCc--ee
Q 008153 294 NQAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGV--EF 371 (576)
Q Consensus 294 NqAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgV--pF 371 (576)
.+.|++.+..... +|+|+|.|.|. +...|+.+ |..++|||+. +...++...+++. ..++ ..
T Consensus 33 ~~~~~~~~~~~~~-~vLdiG~G~G~----~~~~l~~~----~~~~v~~~D~----s~~~~~~a~~~~~----~~~~~~~~ 95 (219)
T 3dlc_A 33 AENIINRFGITAG-TCIDIGSGPGA----LSIALAKQ----SDFSIRALDF----SKHMNEIALKNIA----DANLNDRI 95 (219)
T ss_dssp HHHHHHHHCCCEE-EEEEETCTTSH----HHHHHHHH----SEEEEEEEES----CHHHHHHHHHHHH----HTTCTTTE
T ss_pred HHHHHHhcCCCCC-EEEEECCCCCH----HHHHHHHc----CCCeEEEEEC----CHHHHHHHHHHHH----hccccCce
Confidence 3556666665555 99999999986 55556655 4589999984 3455655544443 3344 24
Q ss_pred EEeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEEe
Q 008153 372 EFRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIVE 436 (576)
Q Consensus 372 eF~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlvE 436 (576)
+|.. ..++++. +..+ ..=+|-|...||++. ....+|+.+ +-|+|.-.+++.
T Consensus 96 ~~~~---~d~~~~~-----~~~~--~~D~v~~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~~~ 147 (219)
T 3dlc_A 96 QIVQ---GDVHNIP-----IEDN--YADLIVSRGSVFFWE----DVATAFREIYRILKSGGKTYIG 147 (219)
T ss_dssp EEEE---CBTTBCS-----SCTT--CEEEEEEESCGGGCS----CHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEE---cCHHHCC-----CCcc--cccEEEECchHhhcc----CHHHHHHHHHHhCCCCCEEEEE
Confidence 4443 2233322 2211 333444555678872 245566554 678998776653
No 14
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=90.00 E-value=2.4 Score=42.52 Aligned_cols=112 Identities=16% Similarity=0.127 Sum_probs=61.0
Q ss_pred HHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCc--eeEE
Q 008153 296 AILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGV--EFEF 373 (576)
Q Consensus 296 AILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgV--pFeF 373 (576)
.|++.+.-.+..+|+|+|-+.|. +...|+.+- |.+++|+++. ...++...+++.+ .++ ..+|
T Consensus 160 ~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~-----~~~~~~a~~~~~~----~~~~~~v~~ 223 (332)
T 3i53_A 160 GIAAKYDWAALGHVVDVGGGSGG----LLSALLTAH---EDLSGTVLDL-----QGPASAAHRRFLD----TGLSGRAQV 223 (332)
T ss_dssp TGGGSSCCGGGSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEEC-----HHHHHHHHHHHHH----TTCTTTEEE
T ss_pred HHHHhCCCCCCCEEEEeCCChhH----HHHHHHHHC---CCCeEEEecC-----HHHHHHHHHhhhh----cCcCcCeEE
Confidence 44555543456799999999993 445555442 4579999974 2445555444433 333 2455
Q ss_pred eeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEE-Eec
Q 008153 374 RGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITI-VEQ 437 (576)
Q Consensus 374 ~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtl-vEq 437 (576)
... ++. ++ +.... .++..+ .-||++.+ .....+|+.+ +.|+|.-.++ +|.
T Consensus 224 ~~~---d~~--~~--~p~~~---D~v~~~--~vlh~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 224 VVG---SFF--DP--LPAGA---GGYVLS--AVLHDWDD--LSAVAILRRCAEAAGSGGVVLVIEA 275 (332)
T ss_dssp EEC---CTT--SC--CCCSC---SEEEEE--SCGGGSCH--HHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred ecC---CCC--CC--CCCCC---cEEEEe--hhhccCCH--HHHHHHHHHHHHhcCCCCEEEEEee
Confidence 532 221 11 11111 344433 45787643 1246677766 6679975554 454
No 15
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=88.83 E-value=4.6 Score=41.36 Aligned_cols=117 Identities=15% Similarity=0.202 Sum_probs=64.9
Q ss_pred HHHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCc--ee
Q 008153 294 NQAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGV--EF 371 (576)
Q Consensus 294 NqAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgV--pF 371 (576)
...|++.+.-.+..+|+|+|-+.|. +...|+.+ -|.+++|+++. ...++...+++. ..|+ ..
T Consensus 191 ~~~l~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~---~p~~~~~~~D~-----~~~~~~a~~~~~----~~~l~~~v 254 (369)
T 3gwz_A 191 AGQVAAAYDFSGAATAVDIGGGRGS----LMAAVLDA---FPGLRGTLLER-----PPVAEEARELLT----GRGLADRC 254 (369)
T ss_dssp HHHHHHHSCCTTCSEEEEETCTTSH----HHHHHHHH---CTTCEEEEEEC-----HHHHHHHHHHHH----HTTCTTTE
T ss_pred HHHHHHhCCCccCcEEEEeCCCccH----HHHHHHHH---CCCCeEEEEcC-----HHHHHHHHHhhh----hcCcCCce
Confidence 3567788766677899999999996 44455544 25689999984 244554444443 2333 24
Q ss_pred EEeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEE-EEecCCC
Q 008153 372 EFRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIIT-IVEQEAN 440 (576)
Q Consensus 372 eF~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvt-lvEqean 440 (576)
+|... ++.+ + +.... .+++.+ .-||++.+ .....+|+.+ +.|+|.-.+ ++|.-..
T Consensus 255 ~~~~~---d~~~--~--~p~~~---D~v~~~--~vlh~~~d--~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 311 (369)
T 3gwz_A 255 EILPG---DFFE--T--IPDGA---DVYLIK--HVLHDWDD--DDVVRILRRIATAMKPDSRLLVIDNLID 311 (369)
T ss_dssp EEEEC---CTTT--C--CCSSC---SEEEEE--SCGGGSCH--HHHHHHHHHHHTTCCTTCEEEEEEEBCC
T ss_pred EEecc---CCCC--C--CCCCc---eEEEhh--hhhccCCH--HHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 55431 1211 1 11111 344444 34677633 1234677766 567886554 4554443
No 16
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=88.70 E-value=1.1 Score=46.30 Aligned_cols=109 Identities=14% Similarity=0.184 Sum_probs=59.4
Q ss_pred HHHHHHhhc-cCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeE
Q 008153 294 NQAILEAFN-NANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFE 372 (576)
Q Consensus 294 NqAILEA~~-g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFe 372 (576)
...|++.+. -...-+|+|+|-|.|. +...|+.+- |.+++|+++.| ..+ +.|+.. -..+
T Consensus 189 ~~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-----~~~--------~~a~~~-~~v~ 247 (364)
T 3p9c_A 189 TKKLLELYHGFEGLGTLVDVGGGVGA----TVAAIAAHY---PTIKGVNFDLP-----HVI--------SEAPQF-PGVT 247 (364)
T ss_dssp HHHHHHHCCTTTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEECH-----HHH--------TTCCCC-TTEE
T ss_pred HHHHHHhcccccCCCEEEEeCCCCCH----HHHHHHHHC---CCCeEEEecCH-----HHH--------Hhhhhc-CCeE
Confidence 356777776 3456799999999996 344444332 56789999853 112 223222 1234
Q ss_pred EeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEE-EEecC
Q 008153 373 FRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIIT-IVEQE 438 (576)
Q Consensus 373 F~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvt-lvEqe 438 (576)
|.. ..+.+ + + .. +.+++.. .-||++.+ .....+|+.+ +.|+|.-.+ ++|.-
T Consensus 248 ~~~---~D~~~--~--~--p~--~D~v~~~--~vlh~~~d--~~~~~~L~~~~~~L~pgG~l~i~e~~ 300 (364)
T 3p9c_A 248 HVG---GDMFK--E--V--PS--GDTILMK--WILHDWSD--QHCATLLKNCYDALPAHGKVVLVQCI 300 (364)
T ss_dssp EEE---CCTTT--C--C--CC--CSEEEEE--SCGGGSCH--HHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred EEe---CCcCC--C--C--CC--CCEEEeh--HHhccCCH--HHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 442 12221 1 1 11 1344443 45787743 2345677776 568997644 45543
No 17
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=88.62 E-value=3.9 Score=41.48 Aligned_cols=113 Identities=19% Similarity=0.245 Sum_probs=62.7
Q ss_pred HHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCce--eE
Q 008153 295 QAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVE--FE 372 (576)
Q Consensus 295 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVp--Fe 372 (576)
..|++.+.-.+..+|+|+|-|.|. +...|+.+- |.+++|+++. ...++...+++. ..|+. .+
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---~~~~~~~~D~-----~~~~~~a~~~~~----~~~~~~~v~ 235 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNGG----MLAAIALRA---PHLRGTLVEL-----AGPAERARRRFA----DAGLADRVT 235 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTSH----HHHHHHHHC---TTCEEEEEEC-----HHHHHHHHHHHH----HTTCTTTEE
T ss_pred HHHHHhCCCCCCCEEEEECCCcCH----HHHHHHHHC---CCCEEEEEeC-----HHHHHHHHHHHH----hcCCCCceE
Confidence 457777655566799999999994 445555442 4679999984 244554444443 33442 45
Q ss_pred EeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEE-EEEec
Q 008153 373 FRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKII-TIVEQ 437 (576)
Q Consensus 373 F~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIv-tlvEq 437 (576)
|... ++.+ .+ +. ..=+|-+...||++.+ .....+|+.+ +.|+|.-. +++|.
T Consensus 236 ~~~~---d~~~----~~---~~--~~D~v~~~~vl~~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 236 VAEG---DFFK----PL---PV--TADVVLLSFVLLNWSD--EDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEC---CTTS----CC---SC--CEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEeC---CCCC----cC---CC--CCCEEEEeccccCCCH--HHHHHHHHHHHHhcCCCcEEEEEec
Confidence 5431 2211 01 11 1223334455777643 1224566665 66899864 44565
No 18
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=88.53 E-value=3.4 Score=39.17 Aligned_cols=126 Identities=14% Similarity=0.083 Sum_probs=67.8
Q ss_pred HHhhcchhhHHHHHHHHHHHHhhcc-CCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHH
Q 008153 279 FYETCPYLKFAHFTANQAILEAFNN-ANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVG 357 (576)
Q Consensus 279 fye~~P~~kfahftANqAILEA~~g-~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG 357 (576)
+|+..+-..-.+......+++.+.+ ...-+|+|+|.|.|. +...|+.+.+ . ++|||+. +...++...
T Consensus 19 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~----~~~~l~~~~~---~-~v~~vD~----s~~~~~~a~ 86 (257)
T 3f4k_A 19 YFKLLKRQGPGSPEATRKAVSFINELTDDAKIADIGCGTGG----QTLFLADYVK---G-QITGIDL----FPDFIEIFN 86 (257)
T ss_dssp HHTTSSCSSSCCHHHHHHHHTTSCCCCTTCEEEEETCTTSH----HHHHHHHHCC---S-EEEEEES----CHHHHHHHH
T ss_pred HHcCccccCCCCHHHHHHHHHHHhcCCCCCeEEEeCCCCCH----HHHHHHHhCC---C-eEEEEEC----CHHHHHHHH
Confidence 4444443333334444455666543 334589999999886 3344444422 2 8999984 344554443
Q ss_pred HHHHHHHhHcCce--eEEeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEE
Q 008153 358 WKLAQLADTIGVE--FEFRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITI 434 (576)
Q Consensus 358 ~rL~~fA~slgVp--FeF~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtl 434 (576)
++ ++..|++ .+|.. ..++++. ... +..=+|-|...+|++ + .+.+|+.+ +-|+|.-+++
T Consensus 87 ~~----~~~~~~~~~~~~~~---~d~~~~~-----~~~--~~fD~v~~~~~l~~~-~----~~~~l~~~~~~L~pgG~l~ 147 (257)
T 3f4k_A 87 EN----AVKANCADRVKGIT---GSMDNLP-----FQN--EELDLIWSEGAIYNI-G----FERGMNEWSKYLKKGGFIA 147 (257)
T ss_dssp HH----HHHTTCTTTEEEEE---CCTTSCS-----SCT--TCEEEEEEESCSCCC-C----HHHHHHHHHTTEEEEEEEE
T ss_pred HH----HHHcCCCCceEEEE---CChhhCC-----CCC--CCEEEEEecChHhhc-C----HHHHHHHHHHHcCCCcEEE
Confidence 33 4455654 55543 2333332 111 133344444567777 2 45666665 5689977665
Q ss_pred E
Q 008153 435 V 435 (576)
Q Consensus 435 v 435 (576)
+
T Consensus 148 ~ 148 (257)
T 3f4k_A 148 V 148 (257)
T ss_dssp E
T ss_pred E
Confidence 4
No 19
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=88.39 E-value=17 Score=34.25 Aligned_cols=111 Identities=12% Similarity=0.166 Sum_probs=62.8
Q ss_pred HHHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCce-eE
Q 008153 294 NQAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVE-FE 372 (576)
Q Consensus 294 NqAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVp-Fe 372 (576)
+.-+++.+.-...-+|+|+|.|.|. +...|+.+- + ++|||+. +...++...+++ +..|++ ++
T Consensus 10 ~~~~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~--~---~v~~vD~----s~~~~~~a~~~~----~~~~~~~v~ 72 (239)
T 1xxl_A 10 LGLMIKTAECRAEHRVLDIGAGAGH----TALAFSPYV--Q---ECIGVDA----TKEMVEVASSFA----QEKGVENVR 72 (239)
T ss_dssp HHHHHHHHTCCTTCEEEEESCTTSH----HHHHHGGGS--S---EEEEEES----CHHHHHHHHHHH----HHHTCCSEE
T ss_pred cchHHHHhCcCCCCEEEEEccCcCH----HHHHHHHhC--C---EEEEEEC----CHHHHHHHHHHH----HHcCCCCeE
Confidence 3345666666667789999999886 445566542 2 8999984 344554444433 333443 44
Q ss_pred EeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHH-HHhcCCcEEEEE
Q 008153 373 FRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSS-IKAMRPKIITIV 435 (576)
Q Consensus 373 F~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~-Ir~L~PkIvtlv 435 (576)
|.. ..++++. ... +..=+|-|...+|++.+ ...+|+. .+-|+|.-.+++
T Consensus 73 ~~~---~d~~~~~-----~~~--~~fD~v~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~ 122 (239)
T 1xxl_A 73 FQQ---GTAESLP-----FPD--DSFDIITCRYAAHHFSD----VRKAVREVARVLKQDGRFLL 122 (239)
T ss_dssp EEE---CBTTBCC-----SCT--TCEEEEEEESCGGGCSC----HHHHHHHHHHHEEEEEEEEE
T ss_pred EEe---cccccCC-----CCC--CcEEEEEECCchhhccC----HHHHHHHHHHHcCCCcEEEE
Confidence 442 2233322 221 23344445566788743 3455555 467899866654
No 20
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=88.30 E-value=1.7 Score=50.67 Aligned_cols=121 Identities=12% Similarity=0.205 Sum_probs=71.5
Q ss_pred HHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHH--hHcCc-eeEE
Q 008153 297 ILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLA--DTIGV-EFEF 373 (576)
Q Consensus 297 ILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA--~slgV-pFeF 373 (576)
|++.+.....-.|+|+|-|.|. +...|+.+ ++|.-++|||+. +...++...++|.... +..|+ ..+|
T Consensus 713 LLelL~~~~g~rVLDVGCGTG~----lai~LAr~--g~p~a~VtGVDI----S~emLe~AReRLa~~lnAkr~gl~nVef 782 (950)
T 3htx_A 713 ALKHIRESSASTLVDFGCGSGS----LLDSLLDY--PTSLQTIIGVDI----SPKGLARAAKMLHVKLNKEACNVKSATL 782 (950)
T ss_dssp HHHHHHHSCCSEEEEETCSSSH----HHHHHTSS--CCCCCEEEEEES----CHHHHHHHHHHHHHHTTTTCSSCSEEEE
T ss_pred HHHHhcccCCCEEEEECCCCCH----HHHHHHHh--CCCCCeEEEEEC----CHHHHHHHHHHhhhccchhhcCCCceEE
Confidence 4455544455679999999995 56667665 356679999994 4567777777776542 22343 3444
Q ss_pred eeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHH-HHhcCCcEEEEEecCC
Q 008153 374 RGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSS-IKAMRPKIITIVEQEA 439 (576)
Q Consensus 374 ~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~-Ir~L~PkIvtlvEqea 439 (576)
.. ..+.++.. ..+.-.+++. ...|||+.+ .....+|+. .+-|+|.++++...+.
T Consensus 783 iq---GDa~dLp~-----~d~sFDlVV~--~eVLeHL~d--p~l~~~L~eI~RvLKPG~LIISTPN~ 837 (950)
T 3htx_A 783 YD---GSILEFDS-----RLHDVDIGTC--LEVIEHMEE--DQACEFGEKVLSLFHPKLLIVSTPNY 837 (950)
T ss_dssp EE---SCTTSCCT-----TSCSCCEEEE--ESCGGGSCH--HHHHHHHHHHHHTTCCSEEEEEECBG
T ss_pred EE---CchHhCCc-----ccCCeeEEEE--eCchhhCCh--HHHHHHHHHHHHHcCCCEEEEEecCc
Confidence 42 34444332 1111134444 456788854 234456655 5888999666665544
No 21
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=87.60 E-value=2.7 Score=38.36 Aligned_cols=97 Identities=15% Similarity=0.217 Sum_probs=54.2
Q ss_pred eeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEeeeecCCCCCCC
Q 008153 306 RVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRGFVCNSLADLE 385 (576)
Q Consensus 306 ~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~~v~~~~ledl~ 385 (576)
.-.|+|+|.|.|. +...|+.+ | .++|||+. +...++...++ .-..+|.. ..+.++.
T Consensus 42 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~----s~~~~~~a~~~--------~~~~~~~~---~d~~~~~ 97 (203)
T 3h2b_A 42 DGVILDVGSGTGR----WTGHLASL--G---HQIEGLEP----ATRLVELARQT--------HPSVTFHH---GTITDLS 97 (203)
T ss_dssp CSCEEEETCTTCH----HHHHHHHT--T---CCEEEECC----CHHHHHHHHHH--------CTTSEEEC---CCGGGGG
T ss_pred CCeEEEecCCCCH----HHHHHHhc--C---CeEEEEeC----CHHHHHHHHHh--------CCCCeEEe---Ccccccc
Confidence 5579999999986 55666665 2 38999985 23444333322 22233432 2233321
Q ss_pred ccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEE
Q 008153 386 PDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIV 435 (576)
Q Consensus 386 ~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlv 435 (576)
...+ ..=+|-|...||++.. .....+|+.+ +.|+|.-.+++
T Consensus 98 -----~~~~--~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~L~pgG~l~i 139 (203)
T 3h2b_A 98 -----DSPK--RWAGLLAWYSLIHMGP--GELPDALVALRMAVEDGGGLLM 139 (203)
T ss_dssp -----GSCC--CEEEEEEESSSTTCCT--TTHHHHHHHHHHTEEEEEEEEE
T ss_pred -----cCCC--CeEEEEehhhHhcCCH--HHHHHHHHHHHHHcCCCcEEEE
Confidence 2212 3334444566888742 2456666655 67899766665
No 22
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=87.49 E-value=2.3 Score=39.32 Aligned_cols=110 Identities=19% Similarity=0.291 Sum_probs=58.4
Q ss_pred eeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCc------eeEEeeeecC
Q 008153 306 RVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGV------EFEFRGFVCN 379 (576)
Q Consensus 306 ~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgV------pFeF~~v~~~ 379 (576)
.-.|+|+|-|.|. +...|+.+ | .++|||+. +...++.+. +.++..++ ..+|.. .
T Consensus 31 ~~~vLdiG~G~G~----~~~~l~~~--~---~~v~~vD~----s~~~~~~a~----~~~~~~~~~~~~~~~~~~~~---~ 90 (235)
T 3sm3_A 31 DDEILDIGCGSGK----ISLELASK--G---YSVTGIDI----NSEAIRLAE----TAARSPGLNQKTGGKAEFKV---E 90 (235)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT--T---CEEEEEES----CHHHHHHHH----HHTTCCSCCSSSSCEEEEEE---C
T ss_pred CCeEEEECCCCCH----HHHHHHhC--C---CeEEEEEC----CHHHHHHHH----HHHHhcCCccccCcceEEEE---e
Confidence 4479999999985 44555555 2 48999984 233443332 23344454 345543 2
Q ss_pred CCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEE-EecCCCCCC
Q 008153 380 SLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITI-VEQEANHNS 443 (576)
Q Consensus 380 ~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtl-vEqeanhNs 443 (576)
...++. ... +..=+|-+...||++.+ +..+..+|+.+ +-|+|.-+++ ++...+...
T Consensus 91 d~~~~~-----~~~--~~~D~v~~~~~l~~~~~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~ 148 (235)
T 3sm3_A 91 NASSLS-----FHD--SSFDFAVMQAFLTSVPD-PKERSRIIKEVFRVLKPGAYLYLVEFGQNWHL 148 (235)
T ss_dssp CTTSCC-----SCT--TCEEEEEEESCGGGCCC-HHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTS
T ss_pred cccccC-----CCC--CceeEEEEcchhhcCCC-HHHHHHHHHHHHHHcCCCeEEEEEECCcchhH
Confidence 233322 111 12334444466788754 22344667665 6689976655 444443333
No 23
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=87.21 E-value=2.3 Score=40.35 Aligned_cols=122 Identities=15% Similarity=0.142 Sum_probs=64.6
Q ss_pred hhhHHHHHHHHHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHH
Q 008153 285 YLKFAHFTANQAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLA 364 (576)
Q Consensus 285 ~~kfahftANqAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA 364 (576)
++.-+....-..|++.+.-...-+|+|+|.|.|. +...|+.+.+ .++|||+. +...++...+++...
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~~~----~~v~~vD~----s~~~~~~a~~~~~~~- 101 (266)
T 3ujc_A 35 YISSGGLEATKKILSDIELNENSKVLDIGSGLGG----GCMYINEKYG----AHTHGIDI----CSNIVNMANERVSGN- 101 (266)
T ss_dssp CCSTTHHHHHHHHTTTCCCCTTCEEEEETCTTSH----HHHHHHHHHC----CEEEEEES----CHHHHHHHHHTCCSC-
T ss_pred ccccchHHHHHHHHHhcCCCCCCEEEEECCCCCH----HHHHHHHHcC----CEEEEEeC----CHHHHHHHHHHhhcC-
Confidence 3333444445677777765666799999999886 3344444322 48999984 233443332222111
Q ss_pred hHcCceeEEeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEE
Q 008153 365 DTIGVEFEFRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIV 435 (576)
Q Consensus 365 ~slgVpFeF~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlv 435 (576)
-..+|.. ..+.++. ... +..=+|-|...|||+.. .....+|+.+ +-|+|.-.+++
T Consensus 102 ----~~~~~~~---~d~~~~~-----~~~--~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~L~pgG~l~~ 157 (266)
T 3ujc_A 102 ----NKIIFEA---NDILTKE-----FPE--NNFDLIYSRDAILALSL--ENKNKLFQKCYKWLKPTGTLLI 157 (266)
T ss_dssp ----TTEEEEE---CCTTTCC-----CCT--TCEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEE
T ss_pred ----CCeEEEE---CccccCC-----CCC--CcEEEEeHHHHHHhcCh--HHHHHHHHHHHHHcCCCCEEEE
Confidence 2233432 2233321 111 23444445566788732 2345666655 66899765554
No 24
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=86.26 E-value=7.7 Score=39.28 Aligned_cols=115 Identities=18% Similarity=0.065 Sum_probs=64.9
Q ss_pred HHHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCce--e
Q 008153 294 NQAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVE--F 371 (576)
Q Consensus 294 NqAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVp--F 371 (576)
.+.|++.+.-.+.-+|+|+|-|.|. +...|+.+- |.+++|+++.| ..++...+++. ..|++ .
T Consensus 179 ~~~l~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-----~~~~~a~~~~~----~~~~~~~v 242 (359)
T 1x19_A 179 IQLLLEEAKLDGVKKMIDVGGGIGD----ISAAMLKHF---PELDSTILNLP-----GAIDLVNENAA----EKGVADRM 242 (359)
T ss_dssp HHHHHHHCCCTTCCEEEEESCTTCH----HHHHHHHHC---TTCEEEEEECG-----GGHHHHHHHHH----HTTCTTTE
T ss_pred HHHHHHhcCCCCCCEEEEECCcccH----HHHHHHHHC---CCCeEEEEecH-----HHHHHHHHHHH----hcCCCCCE
Confidence 4577888765667799999999997 344444431 45799999852 33444444443 23432 4
Q ss_pred EEeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEE-EEecC
Q 008153 372 EFRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIIT-IVEQE 438 (576)
Q Consensus 372 eF~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvt-lvEqe 438 (576)
+|.. ..+.+. .+.. ..+++.+ ..||++.+ .....+|+.+ +.|+|.-.+ ++|.-
T Consensus 243 ~~~~---~d~~~~-----~~~~--~D~v~~~--~vlh~~~d--~~~~~~l~~~~~~L~pgG~l~i~e~~ 297 (359)
T 1x19_A 243 RGIA---VDIYKE-----SYPE--ADAVLFC--RILYSANE--QLSTIMCKKAFDAMRSGGRLLILDMV 297 (359)
T ss_dssp EEEE---CCTTTS-----CCCC--CSEEEEE--SCGGGSCH--HHHHHHHHHHHTTCCTTCEEEEEEEC
T ss_pred EEEe---CccccC-----CCCC--CCEEEEe--chhccCCH--HHHHHHHHHHHHhcCCCCEEEEEecc
Confidence 5543 222222 1111 1354444 45777643 2356677766 567997544 56643
No 25
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=86.21 E-value=13 Score=35.41 Aligned_cols=109 Identities=12% Similarity=0.132 Sum_probs=62.4
Q ss_pred HHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCce-eEEe
Q 008153 296 AILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVE-FEFR 374 (576)
Q Consensus 296 AILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVp-FeF~ 374 (576)
.|++.+.-...-+|+|+|-|.|. +...|+.+. + ++|||+. +...++...+++ +..|++ .+|.
T Consensus 28 ~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~--~---~v~gvD~----s~~~l~~a~~~~----~~~~~~~v~~~ 90 (260)
T 1vl5_A 28 KLMQIAALKGNEEVLDVATGGGH----VANAFAPFV--K---KVVAFDL----TEDILKVARAFI----EGNGHQQVEYV 90 (260)
T ss_dssp HHHHHHTCCSCCEEEEETCTTCH----HHHHHGGGS--S---EEEEEES----CHHHHHHHHHHH----HHTTCCSEEEE
T ss_pred HHHHHhCCCCCCEEEEEeCCCCH----HHHHHHHhC--C---EEEEEeC----CHHHHHHHHHHH----HhcCCCceEEE
Confidence 45556655556689999999886 555666652 2 8999984 345555444433 334443 4554
Q ss_pred eeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHH-HHhcCCcEEEEE
Q 008153 375 GFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSS-IKAMRPKIITIV 435 (576)
Q Consensus 375 ~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~-Ir~L~PkIvtlv 435 (576)
. ..++++. ..+ +..=+|-|.+.||++.+ ...+|+. .|-|+|.-.+++
T Consensus 91 ~---~d~~~l~-----~~~--~~fD~V~~~~~l~~~~d----~~~~l~~~~r~LkpgG~l~~ 138 (260)
T 1vl5_A 91 Q---GDAEQMP-----FTD--ERFHIVTCRIAAHHFPN----PASFVSEAYRVLKKGGQLLL 138 (260)
T ss_dssp E---CCC-CCC-----SCT--TCEEEEEEESCGGGCSC----HHHHHHHHHHHEEEEEEEEE
T ss_pred E---ecHHhCC-----CCC--CCEEEEEEhhhhHhcCC----HHHHHHHHHHHcCCCCEEEE
Confidence 2 2333322 221 23444455567888843 3455554 477899866654
No 26
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=85.44 E-value=9.2 Score=39.36 Aligned_cols=112 Identities=13% Similarity=0.090 Sum_probs=61.6
Q ss_pred CeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHc-C----ceeEEeeeecC
Q 008153 305 NRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTI-G----VEFEFRGFVCN 379 (576)
Q Consensus 305 ~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~sl-g----VpFeF~~v~~~ 379 (576)
+.-+|+|+|.|.|.-=..|.+.+ .|..++|||+. +...++...+++.+.+..+ | -..+|.. .
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~------~~~~~v~gvD~----s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~---~ 149 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLV------GEHGKVIGVDM----LDNQLEVARKYVEYHAEKFFGSPSRSNVRFLK---G 149 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH------TTTCEEEEEEC----CHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEE---S
T ss_pred CCCEEEEecCccCHHHHHHHHHh------CCCCEEEEEEC----CHHHHHHHHHHHHHhhhhcccccCCCceEEEE---c
Confidence 34589999999986333333332 13359999994 4567777777776665554 3 3445553 2
Q ss_pred CCCCCCcc-ccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEE
Q 008153 380 SLADLEPD-MLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIV 435 (576)
Q Consensus 380 ~ledl~~~-~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlv 435 (576)
.++++... ...+..+.-..++.| ..||++.+ ...+|+.+ |-|+|.-.+++
T Consensus 150 d~~~l~~~~~~~~~~~~fD~V~~~--~~l~~~~d----~~~~l~~~~r~LkpgG~l~i 201 (383)
T 4fsd_A 150 FIENLATAEPEGVPDSSVDIVISN--CVCNLSTN----KLALFKEIHRVLRDGGELYF 201 (383)
T ss_dssp CTTCGGGCBSCCCCTTCEEEEEEE--SCGGGCSC----HHHHHHHHHHHEEEEEEEEE
T ss_pred cHHHhhhcccCCCCCCCEEEEEEc--cchhcCCC----HHHHHHHHHHHcCCCCEEEE
Confidence 33333110 001221111344444 45677643 45566655 77899866654
No 27
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=84.89 E-value=31 Score=33.83 Aligned_cols=131 Identities=19% Similarity=0.183 Sum_probs=69.0
Q ss_pred HHhhcchhhHHHHHHHHHHHHh----hc-cCCeeEEEecccCC---CcchHHHHHHHhcCCCCCCeeeEeecCCCCCCCh
Q 008153 279 FYETCPYLKFAHFTANQAILEA----FN-NANRVHVIDFSLKQ---GMQWPALMQALALRPGGPPAFRLTGIGPPQPDNT 350 (576)
Q Consensus 279 fye~~P~~kfahftANqAILEA----~~-g~~~VHIIDf~I~~---G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~ 350 (576)
|.++.|-+. ....+|+..++. +. ....-+|+|+|-|. |. +..+++.. . |..|+|+|+. +.
T Consensus 47 ~~~~~p~~~-~~a~~~~~~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~-~~~~~~~~--~----p~~~v~~vD~----sp 114 (274)
T 2qe6_A 47 ACKHIPGLK-ESAIENRKVLVRGVRFLAGEAGISQFLDLGSGLPTVQN-THEVAQSV--N----PDARVVYVDI----DP 114 (274)
T ss_dssp HHHHSTTHH-HHHHHHHHHHHHHHHHHHTTTCCCEEEEETCCSCCSSC-HHHHHHHH--C----TTCEEEEEES----SH
T ss_pred HHHhcchhH-HHHHHHhHHHHHHHHHHhhccCCCEEEEECCCCCCCCh-HHHHHHHh--C----CCCEEEEEEC----Ch
Confidence 445555443 223445544443 33 22234899999998 84 33333322 1 3479999984 34
Q ss_pred HHHHHHHHHHHHHHhHcCceeEEeeeecCCCCCCCc--------cccccCCCCCceEEEEehhhhhhccCCCChHHHHHH
Q 008153 351 DALQQVGWKLAQLADTIGVEFEFRGFVCNSLADLEP--------DMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVS 422 (576)
Q Consensus 351 ~~L~etG~rL~~fA~slgVpFeF~~v~~~~ledl~~--------~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~ 422 (576)
..|+...+++. ..- ..+|.. .++.+... ..+.. + ...+|-+.+-||++.+. ....+|+
T Consensus 115 ~~l~~Ar~~~~---~~~--~v~~~~---~D~~~~~~~~~~~~~~~~~d~--~--~~d~v~~~~vlh~~~d~--~~~~~l~ 180 (274)
T 2qe6_A 115 MVLTHGRALLA---KDP--NTAVFT---ADVRDPEYILNHPDVRRMIDF--S--RPAAIMLVGMLHYLSPD--VVDRVVG 180 (274)
T ss_dssp HHHHHHHHHHT---TCT--TEEEEE---CCTTCHHHHHHSHHHHHHCCT--T--SCCEEEETTTGGGSCTT--THHHHHH
T ss_pred HHHHHHHHhcC---CCC--CeEEEE---eeCCCchhhhccchhhccCCC--C--CCEEEEEechhhhCCcH--HHHHHHH
Confidence 55555444442 111 234442 23333211 11211 1 45666677789999653 4677888
Q ss_pred HHHh-cCCcEEEEE
Q 008153 423 SIKA-MRPKIITIV 435 (576)
Q Consensus 423 ~Ir~-L~PkIvtlv 435 (576)
.+++ |+|.-.+++
T Consensus 181 ~~~~~L~pGG~l~i 194 (274)
T 2qe6_A 181 AYRDALAPGSYLFM 194 (274)
T ss_dssp HHHHHSCTTCEEEE
T ss_pred HHHHhCCCCcEEEE
Confidence 7755 999755443
No 28
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=84.31 E-value=3.4 Score=41.87 Aligned_cols=44 Identities=11% Similarity=0.045 Sum_probs=31.7
Q ss_pred HHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCC
Q 008153 295 QAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPP 345 (576)
Q Consensus 295 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p 345 (576)
..|++.+.-.+.-+|+|+|-|.|. +...|+.+- |.+++|+++.|
T Consensus 174 ~~~~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~ 217 (348)
T 3lst_A 174 LILARAGDFPATGTVADVGGGRGG----FLLTVLREH---PGLQGVLLDRA 217 (348)
T ss_dssp HHHHHHSCCCSSEEEEEETCTTSH----HHHHHHHHC---TTEEEEEEECH
T ss_pred HHHHHhCCccCCceEEEECCccCH----HHHHHHHHC---CCCEEEEecCH
Confidence 467787765667899999999996 444444432 56899999853
No 29
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=84.20 E-value=3.8 Score=42.10 Aligned_cols=109 Identities=17% Similarity=0.231 Sum_probs=59.3
Q ss_pred HHHHHHhhc-cCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeE
Q 008153 294 NQAILEAFN-NANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFE 372 (576)
Q Consensus 294 NqAILEA~~-g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFe 372 (576)
...|++.+. -...-+|+|+|-|.|. +...|+.+- |.+++|+++.| ..+ +.|+.. -..+
T Consensus 191 ~~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-----~~~--------~~a~~~-~~v~ 249 (368)
T 3reo_A 191 MKKILEMYNGFEGLTTIVDVGGGTGA----VASMIVAKY---PSINAINFDLP-----HVI--------QDAPAF-SGVE 249 (368)
T ss_dssp HHHHHTTCCTTTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEECH-----HHH--------TTCCCC-TTEE
T ss_pred HHHHHHhcccccCCCEEEEeCCCcCH----HHHHHHHhC---CCCEEEEEehH-----HHH--------Hhhhhc-CCCE
Confidence 345677765 3456799999999996 444454432 56899999853 112 222221 1234
Q ss_pred EeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEE-EEEecC
Q 008153 373 FRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKII-TIVEQE 438 (576)
Q Consensus 373 F~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIv-tlvEqe 438 (576)
|.. ..+.+ + + + ++.+++.+ +-||++.+ .....+|+.+ +.|+|.-. +++|.-
T Consensus 250 ~~~---~d~~~--~--~---p-~~D~v~~~--~vlh~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~~ 302 (368)
T 3reo_A 250 HLG---GDMFD--G--V---P-KGDAIFIK--WICHDWSD--EHCLKLLKNCYAALPDHGKVIVAEYI 302 (368)
T ss_dssp EEE---CCTTT--C--C---C-CCSEEEEE--SCGGGBCH--HHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred EEe---cCCCC--C--C---C-CCCEEEEe--chhhcCCH--HHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 432 12221 1 1 1 11455444 34787743 2345677766 67899754 445543
No 30
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=83.72 E-value=5 Score=41.75 Aligned_cols=119 Identities=13% Similarity=0.144 Sum_probs=65.5
Q ss_pred HHHHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCc---
Q 008153 293 ANQAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGV--- 369 (576)
Q Consensus 293 ANqAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgV--- 369 (576)
..+.+++.+.....-+|+|+|.|.|. +...|+.+. |..++|||+. +...++.+.+++. ..|+
T Consensus 210 ~~~~ll~~l~~~~~~~VLDlGcG~G~----~s~~la~~~---p~~~V~gvD~----s~~al~~Ar~n~~----~ngl~~~ 274 (375)
T 4dcm_A 210 GARFFMQHLPENLEGEIVDLGCGNGV----IGLTLLDKN---PQAKVVFVDE----SPMAVASSRLNVE----TNMPEAL 274 (375)
T ss_dssp HHHHHHHTCCCSCCSEEEEETCTTCH----HHHHHHHHC---TTCEEEEEES----CHHHHHHHHHHHH----HHCGGGG
T ss_pred HHHHHHHhCcccCCCeEEEEeCcchH----HHHHHHHHC---CCCEEEEEEC----cHHHHHHHHHHHH----HcCCCcC
Confidence 34567888876666789999999995 444455442 4468999984 4556655555543 3343
Q ss_pred -eeEEeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEEe
Q 008153 370 -EFEFRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIVE 436 (576)
Q Consensus 370 -pFeF~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlvE 436 (576)
.++|.. .+-.+.+ ..+.-..++.|-.|.-..-... .....+|+.+ +-|+|.-.+++.
T Consensus 275 ~~v~~~~--~D~~~~~-------~~~~fD~Ii~nppfh~~~~~~~-~~~~~~l~~~~~~LkpgG~l~iv 333 (375)
T 4dcm_A 275 DRCEFMI--NNALSGV-------EPFRFNAVLCNPPFHQQHALTD-NVAWEMFHHARRCLKINGELYIV 333 (375)
T ss_dssp GGEEEEE--CSTTTTC-------CTTCEEEEEECCCC-------C-CHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceEEEEe--chhhccC-------CCCCeeEEEECCCcccCcccCH-HHHHHHHHHHHHhCCCCcEEEEE
Confidence 355553 2112211 1111247777766532211211 2344566665 558998777764
No 31
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=83.20 E-value=3.2 Score=38.46 Aligned_cols=118 Identities=14% Similarity=0.209 Sum_probs=65.5
Q ss_pred HHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCc-----
Q 008153 295 QAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGV----- 369 (576)
Q Consensus 295 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgV----- 369 (576)
+.|++.+...+.-.|+|+|-|.|. +...|+.+. |..++|||+. +...++...+++. ..++
T Consensus 19 ~~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~---~~~~v~gvD~----s~~~~~~a~~~~~----~~~~~~~~~ 83 (219)
T 3jwg_A 19 GTVVAVLKSVNAKKVIDLGCGEGN----LLSLLLKDK---SFEQITGVDV----SYSVLERAKDRLK----IDRLPEMQR 83 (219)
T ss_dssp HHHHHHHHHTTCCEEEEETCTTCH----HHHHHHTST---TCCEEEEEES----CHHHHHHHHHHHT----GGGSCHHHH
T ss_pred HHHHHHHhhcCCCEEEEecCCCCH----HHHHHHhcC---CCCEEEEEEC----CHHHHHHHHHHHH----hhccccccC
Confidence 445555554555689999999986 556666542 4479999994 3455555444432 1122
Q ss_pred -eeEEeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEEecCC
Q 008153 370 -EFEFRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIVEQEA 439 (576)
Q Consensus 370 -pFeF~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlvEqea 439 (576)
.++|.. ..++.+.. ..+.-.+++ |...||++.+ ..+..+|+.+ +.|+|.-++++....
T Consensus 84 ~~v~~~~---~d~~~~~~-----~~~~fD~V~--~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~~i~~~~~ 143 (219)
T 3jwg_A 84 KRISLFQ---SSLVYRDK-----RFSGYDAAT--VIEVIEHLDE--NRLQAFEKVLFEFTRPQTVIVSTPNK 143 (219)
T ss_dssp TTEEEEE---CCSSSCCG-----GGTTCSEEE--EESCGGGCCH--HHHHHHHHHHHTTTCCSEEEEEEEBG
T ss_pred cceEEEe---Cccccccc-----ccCCCCEEE--EHHHHHhCCH--HHHHHHHHHHHHhhCCCEEEEEccch
Confidence 234432 22322221 111113444 4456788732 2345677665 678999877765543
No 32
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=83.04 E-value=6.6 Score=36.08 Aligned_cols=96 Identities=15% Similarity=0.194 Sum_probs=55.1
Q ss_pred eeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEeeeecCCCCCCC
Q 008153 306 RVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRGFVCNSLADLE 385 (576)
Q Consensus 306 ~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~~v~~~~ledl~ 385 (576)
.-.|+|+|.|.|. +...|+.+ + .++|||+. +...++...+++ ++.|.-. .++++.
T Consensus 44 ~~~vLDiGcG~G~----~~~~l~~~-~----~~v~~vD~----s~~~~~~a~~~~-------~~~~~~~-----d~~~~~ 98 (211)
T 3e23_A 44 GAKILELGCGAGY----QAEAMLAA-G----FDVDATDG----SPELAAEASRRL-------GRPVRTM-----LFHQLD 98 (211)
T ss_dssp TCEEEESSCTTSH----HHHHHHHT-T----CEEEEEES----CHHHHHHHHHHH-------TSCCEEC-----CGGGCC
T ss_pred CCcEEEECCCCCH----HHHHHHHc-C----CeEEEECC----CHHHHHHHHHhc-------CCceEEe-----eeccCC
Confidence 4479999999886 55566655 2 48999984 344454443333 5543322 222222
Q ss_pred ccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEEe
Q 008153 386 PDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIVE 436 (576)
Q Consensus 386 ~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlvE 436 (576)
. ++..=+|-|...||++.. .....+|+.+ +.|+|.-++++.
T Consensus 99 -------~-~~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~~ 140 (211)
T 3e23_A 99 -------A-IDAYDAVWAHACLLHVPR--DELADVLKLIWRALKPGGLFYAS 140 (211)
T ss_dssp -------C-CSCEEEEEECSCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -------C-CCcEEEEEecCchhhcCH--HHHHHHHHHHHHhcCCCcEEEEE
Confidence 1 123334445566788742 2355666665 668998777763
No 33
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=82.94 E-value=8.9 Score=37.92 Aligned_cols=110 Identities=11% Similarity=0.087 Sum_probs=61.8
Q ss_pred HHHHHhhc-cCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCce--e
Q 008153 295 QAILEAFN-NANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVE--F 371 (576)
Q Consensus 295 qAILEA~~-g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVp--F 371 (576)
+.|++.+. -...-+|+|+|.|.|. +...|+.+.+ .++|||+. +...++...++ ++..|++ .
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~----s~~~~~~a~~~----~~~~~~~~~v 169 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGG----SMVMAHRRFG----SRVEGVTL----SAAQADFGNRR----ARELRIDDHV 169 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSH----HHHHHHHHHC----CEEEEEES----CHHHHHHHHHH----HHHTTCTTTE
T ss_pred HHHHHHhccCCCCCEEEEecCCCCH----HHHHHHHHcC----CEEEEEeC----CHHHHHHHHHH----HHHcCCCCce
Confidence 45667665 3445689999999885 3444554432 58999984 34455544443 3445554 5
Q ss_pred EEeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEE
Q 008153 372 EFRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIV 435 (576)
Q Consensus 372 eF~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlv 435 (576)
+|.. ..++++. ...+ ..=+|-|...+|++ + ...+|+.+ +-|+|.-.+++
T Consensus 170 ~~~~---~d~~~~~-----~~~~--~fD~V~~~~~l~~~-~----~~~~l~~~~~~LkpgG~l~~ 219 (312)
T 3vc1_A 170 RSRV---CNMLDTP-----FDKG--AVTASWNNESTMYV-D----LHDLFSEHSRFLKVGGRYVT 219 (312)
T ss_dssp EEEE---CCTTSCC-----CCTT--CEEEEEEESCGGGS-C----HHHHHHHHHHHEEEEEEEEE
T ss_pred EEEE---CChhcCC-----CCCC--CEeEEEECCchhhC-C----HHHHHHHHHHHcCCCcEEEE
Confidence 5543 2333332 1111 33334344567777 3 55666655 67899766553
No 34
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=82.43 E-value=12 Score=34.45 Aligned_cols=116 Identities=16% Similarity=0.260 Sum_probs=64.1
Q ss_pred HHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCc------
Q 008153 296 AILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGV------ 369 (576)
Q Consensus 296 AILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgV------ 369 (576)
.|++.+...+.-.|+|+|.|.|. +...|+.+. |..++|||+. +...++...+++ +..++
T Consensus 20 ~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~---~~~~v~gvD~----s~~~~~~a~~~~----~~~~~~~~~~~ 84 (217)
T 3jwh_A 20 GVVAALKQSNARRVIDLGCGQGN----LLKILLKDS---FFEQITGVDV----SYRSLEIAQERL----DRLRLPRNQWE 84 (217)
T ss_dssp HHHHHHHHTTCCEEEEETCTTCH----HHHHHHHCT---TCSEEEEEES----CHHHHHHHHHHH----TTCCCCHHHHT
T ss_pred HHHHHHHhcCCCEEEEeCCCCCH----HHHHHHhhC---CCCEEEEEEC----CHHHHHHHHHHH----HHhcCCcccCc
Confidence 34555554455689999999986 555566552 3469999984 345555444443 22233
Q ss_pred eeEEeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEEecC
Q 008153 370 EFEFRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIVEQE 438 (576)
Q Consensus 370 pFeF~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlvEqe 438 (576)
.++|.. ..+..+... .. .-.+++ |...||++.+ ..+..+|+.+ +-|+|.-++++...
T Consensus 85 ~v~~~~---~d~~~~~~~---~~--~fD~v~--~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 85 RLQLIQ---GALTYQDKR---FH--GYDAAT--VIEVIEHLDL--SRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp TEEEEE---CCTTSCCGG---GC--SCSEEE--EESCGGGCCH--HHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred ceEEEe---CCccccccc---CC--CcCEEe--eHHHHHcCCH--HHHHHHHHHHHHHcCCCEEEEEccC
Confidence 244442 223222211 11 113444 4455788732 2356777766 56899987776443
No 35
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=81.93 E-value=19 Score=36.27 Aligned_cols=137 Identities=16% Similarity=0.176 Sum_probs=73.1
Q ss_pred HHHhhcchhhHHHHHHHHHHHHhh----ccC-CeeEEEecccCCCc--chHHHHHHHhcCCCCCCeeeEeecCCCCCCCh
Q 008153 278 HFYETCPYLKFAHFTANQAILEAF----NNA-NRVHVIDFSLKQGM--QWPALMQALALRPGGPPAFRLTGIGPPQPDNT 350 (576)
Q Consensus 278 ~fye~~P~~kfahftANqAILEA~----~g~-~~VHIIDf~I~~G~--QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~ 350 (576)
.+.+..|-++ ...-+|.+-|.-+ .++ ..=+|+|+|-|-|. .--.+.|.++ |..|||+|+ .+.
T Consensus 47 ~~~~~~P~~~-~~a~~nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~------P~arVv~VD----~sp 115 (277)
T 3giw_A 47 AMSREWPALP-VHMRANRDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVA------PESRVVYVD----NDP 115 (277)
T ss_dssp HHHHHCTTHH-HHHHHHHHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHC------TTCEEEEEE----CCH
T ss_pred HHHHhCCCHH-HHHHHHHHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHC------CCCEEEEEe----CCh
Confidence 4567788764 3344787776653 233 23379999998643 2233334332 457999998 344
Q ss_pred HHHHHHHHHHHHHHhHcCceeEEeeeecCCCCCCC--------ccccccCCCCCceEEEEehhhhhhccCCCChHHHHHH
Q 008153 351 DALQQVGWKLAQLADTIGVEFEFRGFVCNSLADLE--------PDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVS 422 (576)
Q Consensus 351 ~~L~etG~rL~~fA~slgVpFeF~~v~~~~ledl~--------~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~ 422 (576)
..|+....+|.+. -.-..+|.. ..+.++. ...+++ + +.++|-+..-||+|.+...+...+=+
T Consensus 116 ~mLa~Ar~~l~~~---~~~~~~~v~---aD~~~~~~~l~~~~~~~~~D~--~--~p~av~~~avLH~l~d~~~p~~~l~~ 185 (277)
T 3giw_A 116 IVLTLSQGLLAST---PEGRTAYVE---ADMLDPASILDAPELRDTLDL--T--RPVALTVIAIVHFVLDEDDAVGIVRR 185 (277)
T ss_dssp HHHHTTHHHHCCC---SSSEEEEEE---CCTTCHHHHHTCHHHHTTCCT--T--SCCEEEEESCGGGSCGGGCHHHHHHH
T ss_pred HHHHHHHHHhccC---CCCcEEEEE---ecccChhhhhcccccccccCc--C--CcchHHhhhhHhcCCchhhHHHHHHH
Confidence 5565544444321 111345543 2333321 122333 2 44445556668999764223333335
Q ss_pred HHHhcCCcEEEEE
Q 008153 423 SIKAMRPKIITIV 435 (576)
Q Consensus 423 ~Ir~L~PkIvtlv 435 (576)
..+.|+|.-++++
T Consensus 186 l~~~L~PGG~Lvl 198 (277)
T 3giw_A 186 LLEPLPSGSYLAM 198 (277)
T ss_dssp HHTTSCTTCEEEE
T ss_pred HHHhCCCCcEEEE
Confidence 5677899865554
No 36
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=81.19 E-value=7 Score=36.74 Aligned_cols=115 Identities=13% Similarity=0.121 Sum_probs=61.8
Q ss_pred HHHHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeE
Q 008153 293 ANQAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFE 372 (576)
Q Consensus 293 ANqAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFe 372 (576)
....+++.+.....-+|+|+|.|.|.--..|.+.. ..++|||+. +...++...+++... -..+
T Consensus 81 ~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~--------~~~v~~vD~----s~~~~~~a~~~~~~~-----~~~~ 143 (254)
T 1xtp_A 81 GSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKL--------YATTDLLEP----VKHMLEEAKRELAGM-----PVGK 143 (254)
T ss_dssp HHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHH--------CSEEEEEES----CHHHHHHHHHHTTTS-----SEEE
T ss_pred HHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhh--------cCEEEEEeC----CHHHHHHHHHHhccC-----CceE
Confidence 33567777766667799999999987333333322 237999984 344454443333211 2334
Q ss_pred EeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEEe
Q 008153 373 FRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIVE 436 (576)
Q Consensus 373 F~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlvE 436 (576)
|.. ..++++. ...+ ..=+|-|...||++.+ .....+|+.+ +.|+|.-++++.
T Consensus 144 ~~~---~d~~~~~-----~~~~--~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~i~ 196 (254)
T 1xtp_A 144 FIL---ASMETAT-----LPPN--TYDLIVIQWTAIYLTD--ADFVKFFKHCQQALTPNGYIFFK 196 (254)
T ss_dssp EEE---SCGGGCC-----CCSS--CEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEE---ccHHHCC-----CCCC--CeEEEEEcchhhhCCH--HHHHHHHHHHHHhcCCCeEEEEE
Confidence 432 2233322 2111 2333444556888743 2345566654 678998766653
No 37
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=80.53 E-value=12 Score=36.28 Aligned_cols=110 Identities=11% Similarity=0.114 Sum_probs=63.0
Q ss_pred HHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEee
Q 008153 296 AILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRG 375 (576)
Q Consensus 296 AILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~~ 375 (576)
.+++.+...+.-+|+|+|-|.|. +...|+.+ | .++|||+. +...++...++ ++..|+..+|..
T Consensus 111 ~~~~~~~~~~~~~vLD~GcG~G~----~~~~l~~~--g---~~v~~vD~----s~~~~~~a~~~----~~~~~~~~~~~~ 173 (286)
T 3m70_A 111 DVVDAAKIISPCKVLDLGCGQGR----NSLYLSLL--G---YDVTSWDH----NENSIAFLNET----KEKENLNISTAL 173 (286)
T ss_dssp HHHHHHHHSCSCEEEEESCTTCH----HHHHHHHT--T---CEEEEEES----CHHHHHHHHHH----HHHTTCCEEEEE
T ss_pred HHHHHhhccCCCcEEEECCCCCH----HHHHHHHC--C---CeEEEEEC----CHHHHHHHHHH----HHHcCCceEEEE
Confidence 45555554466789999999986 55556665 2 48999984 34555544443 344565555553
Q ss_pred eecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEE
Q 008153 376 FVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIV 435 (576)
Q Consensus 376 v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlv 435 (576)
..+.++.. .+ ..=+|-|...+|++.. ..+..+|+.+ +.|+|.-++++
T Consensus 174 ---~d~~~~~~------~~--~fD~i~~~~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~i 221 (286)
T 3m70_A 174 ---YDINAANI------QE--NYDFIVSTVVFMFLNR--ERVPSIIKNMKEHTNVGGYNLI 221 (286)
T ss_dssp ---CCGGGCCC------CS--CEEEEEECSSGGGSCG--GGHHHHHHHHHHTEEEEEEEEE
T ss_pred ---eccccccc------cC--CccEEEEccchhhCCH--HHHHHHHHHHHHhcCCCcEEEE
Confidence 22332221 11 2323333345777732 3456777765 67799876443
No 38
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=79.09 E-value=13 Score=32.84 Aligned_cols=113 Identities=11% Similarity=0.061 Sum_probs=62.2
Q ss_pred HHHHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCce--
Q 008153 293 ANQAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVE-- 370 (576)
Q Consensus 293 ANqAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVp-- 370 (576)
..+.+++.+.-...-+|+|+|.|.|. +...|+.+ + .++|||+. +...++...+++ +..+++
T Consensus 40 ~~~~l~~~~~~~~~~~vLdiG~G~G~----~~~~~~~~-~----~~v~~~D~----~~~~~~~a~~~~----~~~~~~~~ 102 (194)
T 1dus_A 40 GTKILVENVVVDKDDDILDLGCGYGV----IGIALADE-V----KSTTMADI----NRRAIKLAKENI----KLNNLDNY 102 (194)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCTTSH----HHHHHGGG-S----SEEEEEES----CHHHHHHHHHHH----HHTTCTTS
T ss_pred HHHHHHHHcccCCCCeEEEeCCCCCH----HHHHHHHc-C----CeEEEEEC----CHHHHHHHHHHH----HHcCCCcc
Confidence 34567777765566789999999885 44556655 2 48999984 344554444433 334554
Q ss_pred -eEEeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEEe
Q 008153 371 -FEFRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIVE 436 (576)
Q Consensus 371 -FeF~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlvE 436 (576)
.+|.. ..+.+..+ .+.-..++.|.. +|+- ......+|+.+ +.|+|.-.+++.
T Consensus 103 ~~~~~~---~d~~~~~~------~~~~D~v~~~~~--~~~~---~~~~~~~l~~~~~~L~~gG~l~~~ 156 (194)
T 1dus_A 103 DIRVVH---SDLYENVK------DRKYNKIITNPP--IRAG---KEVLHRIIEEGKELLKDNGEIWVV 156 (194)
T ss_dssp CEEEEE---CSTTTTCT------TSCEEEEEECCC--STTC---HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceEEEE---Cchhcccc------cCCceEEEECCC--cccc---hhHHHHHHHHHHHHcCCCCEEEEE
Confidence 55543 12222111 111145555544 3321 12345566654 668998776654
No 39
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=78.44 E-value=17 Score=33.71 Aligned_cols=99 Identities=13% Similarity=0.211 Sum_probs=53.2
Q ss_pred CeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEeeeecCCCCCC
Q 008153 305 NRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRGFVCNSLADL 384 (576)
Q Consensus 305 ~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~~v~~~~ledl 384 (576)
..-+|+|+|.|.|. +...|+.+ + .++|||+.. ...++...++ +. ....+|.. ..+.++
T Consensus 53 ~~~~vLDiG~G~G~----~~~~l~~~-~----~~v~~vD~s----~~~~~~a~~~----~~--~~~~~~~~---~d~~~~ 110 (242)
T 3l8d_A 53 KEAEVLDVGCGDGY----GTYKLSRT-G----YKAVGVDIS----EVMIQKGKER----GE--GPDLSFIK---GDLSSL 110 (242)
T ss_dssp TTCEEEEETCTTSH----HHHHHHHT-T----CEEEEEESC----HHHHHHHHTT----TC--BTTEEEEE---CBTTBC
T ss_pred CCCeEEEEcCCCCH----HHHHHHHc-C----CeEEEEECC----HHHHHHHHhh----cc--cCCceEEE---cchhcC
Confidence 34489999999986 55566665 2 389999842 3344332222 11 22334442 122222
Q ss_pred CccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHH-HHhcCCcEEEEEe
Q 008153 385 EPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSS-IKAMRPKIITIVE 436 (576)
Q Consensus 385 ~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~-Ir~L~PkIvtlvE 436 (576)
. ... +..=+|-|...|||+.+ ...+|+. .+-|+|.-++++.
T Consensus 111 ~-----~~~--~~fD~v~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~i~ 152 (242)
T 3l8d_A 111 P-----FEN--EQFEAIMAINSLEWTEE----PLRALNEIKRVLKSDGYACIA 152 (242)
T ss_dssp S-----SCT--TCEEEEEEESCTTSSSC----HHHHHHHHHHHEEEEEEEEEE
T ss_pred C-----CCC--CCccEEEEcChHhhccC----HHHHHHHHHHHhCCCeEEEEE
Confidence 1 211 23444555566888732 3445554 4778997766653
No 40
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=78.02 E-value=11 Score=38.03 Aligned_cols=33 Identities=9% Similarity=0.102 Sum_probs=23.9
Q ss_pred CeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCC
Q 008153 305 NRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGP 344 (576)
Q Consensus 305 ~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~ 344 (576)
+.-+|+|+|-|.|. +...|+.+- |.+++|+++.
T Consensus 188 ~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~ 220 (352)
T 1fp2_A 188 GLESIVDVGGGTGT----TAKIICETF---PKLKCIVFDR 220 (352)
T ss_dssp TCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEEC
T ss_pred cCceEEEeCCCccH----HHHHHHHHC---CCCeEEEeeC
Confidence 34689999999995 455555442 4578999985
No 41
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=77.44 E-value=25 Score=34.50 Aligned_cols=115 Identities=11% Similarity=0.066 Sum_probs=60.7
Q ss_pred CeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhH----cCceeEEeeeecCC
Q 008153 305 NRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADT----IGVEFEFRGFVCNS 380 (576)
Q Consensus 305 ~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~s----lgVpFeF~~v~~~~ 380 (576)
+.-+|+|+|-|.|.- ...|+.++ .-++|||+. +...++...+++...... ....++|.. ..
T Consensus 34 ~~~~VLDlGcG~G~~----~~~l~~~~----~~~v~gvD~----s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~---~D 98 (313)
T 3bgv_A 34 RDITVLDLGCGKGGD----LLKWKKGR----INKLVCTDI----ADVSVKQCQQRYEDMKNRRDSEYIFSAEFIT---AD 98 (313)
T ss_dssp -CCEEEEETCTTTTT----HHHHHHTT----CSEEEEEES----CHHHHHHHHHHHHHHHSSSCC-CCCEEEEEE---CC
T ss_pred CCCEEEEECCCCcHH----HHHHHhcC----CCEEEEEeC----CHHHHHHHHHHHHHhhhcccccccceEEEEE---ec
Confidence 556899999998873 34444432 358999984 345666655555432210 112344442 23
Q ss_pred CCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEE
Q 008153 381 LADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIV 435 (576)
Q Consensus 381 ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlv 435 (576)
++++.... .+...++..=+|-|.+.||++.........+|+.+ +.|+|.-++++
T Consensus 99 ~~~~~~~~-~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~ 153 (313)
T 3bgv_A 99 SSKELLID-KFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIG 153 (313)
T ss_dssp TTTSCSTT-TCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred ccccchhh-hcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEE
Confidence 33332100 01111113334445567888743323456777766 66899877665
No 42
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=77.40 E-value=24 Score=35.27 Aligned_cols=110 Identities=10% Similarity=0.109 Sum_probs=62.0
Q ss_pred eeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCc-------eeEEeeeec
Q 008153 306 RVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGV-------EFEFRGFVC 378 (576)
Q Consensus 306 ~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgV-------pFeF~~v~~ 378 (576)
.-+|+|+|.|.|. ++..++.+.+ -++|||+. +...|+....+..+ .++ .++|.....
T Consensus 49 ~~~VLDlGCG~G~----~l~~~~~~~~----~~v~GiD~----S~~~l~~A~~~~~~----~~~~~~~~~~~~~f~~~d~ 112 (302)
T 2vdw_A 49 KRKVLAIDFGNGA----DLEKYFYGEI----ALLVATDP----DADAIARGNERYNK----LNSGIKTKYYKFDYIQETI 112 (302)
T ss_dssp CCEEEETTCTTTT----THHHHHHTTC----SEEEEEES----CHHHHHHHHHHHHH----HCC----CCCEEEEEECCT
T ss_pred CCeEEEEecCCcH----hHHHHHhcCC----CeEEEEEC----CHHHHHHHHHHHHh----ccccccccccccchhhhhc
Confidence 4589999999985 2222333322 37999994 45667666555433 332 245543211
Q ss_pred CCCCCCCccccc-cCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEE
Q 008153 379 NSLADLEPDMLD-IRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIV 435 (576)
Q Consensus 379 ~~ledl~~~~L~-lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlv 435 (576)
..+.....|. .-+ ++..=+|-|++.||++.... .+..+|+.+ |-|+|.-++++
T Consensus 113 --~~d~~~~~l~~~~~-~~~FD~V~~~~~lhy~~~~~-~~~~~l~~~~r~LkpGG~~i~ 167 (302)
T 2vdw_A 113 --RSDTFVSSVREVFY-FGKFNIIDWQFAIHYSFHPR-HYATVMNNLSELTASGGKVLI 167 (302)
T ss_dssp --TSSSHHHHHHTTCC-SSCEEEEEEESCGGGTCSTT-THHHHHHHHHHHEEEEEEEEE
T ss_pred --ccchhhhhhhcccc-CCCeeEEEECchHHHhCCHH-HHHHHHHHHHHHcCCCCEEEE
Confidence 1111001110 001 22456777888999886543 346777766 67899877765
No 43
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=77.39 E-value=34 Score=33.16 Aligned_cols=103 Identities=17% Similarity=0.167 Sum_probs=57.5
Q ss_pred CCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEeeeecCCCCC
Q 008153 304 ANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRGFVCNSLAD 383 (576)
Q Consensus 304 ~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~~v~~~~led 383 (576)
.+.-.|+|+|.|.|. +...|+.+- |+..++|||+. +...++...++ ++..+...+|.. ..+++
T Consensus 21 ~~~~~vLDiGcG~G~----~~~~l~~~~--~~~~~v~gvD~----s~~~~~~a~~~----~~~~~~~v~~~~---~d~~~ 83 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGY----LGLVLMPLL--PEGSKYTGIDS----GETLLAEAREL----FRLLPYDSEFLE---GDATE 83 (284)
T ss_dssp CSCCEEEEETCTTTH----HHHHHTTTS--CTTCEEEEEES----CHHHHHHHHHH----HHSSSSEEEEEE---SCTTT
T ss_pred CCCCeEEEecCCCCH----HHHHHHHhC--CCCCEEEEEEC----CHHHHHHHHHH----HHhcCCceEEEE---cchhh
Confidence 456789999999984 445566542 23478999984 23444433333 334455556653 22333
Q ss_pred CCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHH-HHhcCCcEEEEE
Q 008153 384 LEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSS-IKAMRPKIITIV 435 (576)
Q Consensus 384 l~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~-Ir~L~PkIvtlv 435 (576)
+.. ++ ..=+|-|...||++.+ .+.+|+. .+-|+|.-.+++
T Consensus 84 ~~~------~~--~fD~v~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~ 124 (284)
T 3gu3_A 84 IEL------ND--KYDIAICHAFLLHMTT----PETMLQKMIHSVKKGGKIIC 124 (284)
T ss_dssp CCC------SS--CEEEEEEESCGGGCSS----HHHHHHHHHHTEEEEEEEEE
T ss_pred cCc------CC--CeeEEEECChhhcCCC----HHHHHHHHHHHcCCCCEEEE
Confidence 221 11 2334444455777743 3455554 477899877664
No 44
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=77.38 E-value=11 Score=34.50 Aligned_cols=110 Identities=11% Similarity=0.082 Sum_probs=62.7
Q ss_pred HHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEee
Q 008153 296 AILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRG 375 (576)
Q Consensus 296 AILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~~ 375 (576)
.|.+.+...+.-+|+|+|.|.|. +...|+.+ + -++|||+. +...++...+++.. .+ ..+|..
T Consensus 42 ~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~--~---~~v~~vD~----s~~~~~~a~~~~~~----~~-~~~~~~ 103 (216)
T 3ofk_A 42 LLRLSLSSGAVSNGLEIGCAAGA----FTEKLAPH--C---KRLTVIDV----MPRAIGRACQRTKR----WS-HISWAA 103 (216)
T ss_dssp HHHHHTTTSSEEEEEEECCTTSH----HHHHHGGG--E---EEEEEEES----CHHHHHHHHHHTTT----CS-SEEEEE
T ss_pred HHHHHcccCCCCcEEEEcCCCCH----HHHHHHHc--C---CEEEEEEC----CHHHHHHHHHhccc----CC-CeEEEE
Confidence 34445556677899999999995 55566655 2 48999984 34455544443322 22 344442
Q ss_pred eecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEE
Q 008153 376 FVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIV 435 (576)
Q Consensus 376 v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlv 435 (576)
..++++.+ ++..=+|-|...|||+.+ +..+..+|+.+ +-|+|.-++++
T Consensus 104 ---~d~~~~~~--------~~~fD~v~~~~~l~~~~~-~~~~~~~l~~~~~~L~pgG~l~~ 152 (216)
T 3ofk_A 104 ---TDILQFST--------AELFDLIVVAEVLYYLED-MTQMRTAIDNMVKMLAPGGHLVF 152 (216)
T ss_dssp ---CCTTTCCC--------SCCEEEEEEESCGGGSSS-HHHHHHHHHHHHHTEEEEEEEEE
T ss_pred ---cchhhCCC--------CCCccEEEEccHHHhCCC-HHHHHHHHHHHHHHcCCCCEEEE
Confidence 23333321 112334444466888754 23344556554 67899877665
No 45
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=77.14 E-value=17 Score=37.02 Aligned_cols=44 Identities=11% Similarity=0.161 Sum_probs=30.4
Q ss_pred HHHHHHhhc-cCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCC
Q 008153 294 NQAILEAFN-NANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGP 344 (576)
Q Consensus 294 NqAILEA~~-g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~ 344 (576)
...|++.+. -.+.-+|+|+|-|.|. +...|+.+- |.+++|+++.
T Consensus 197 ~~~l~~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---~~~~~~~~D~ 241 (372)
T 1fp1_D 197 MKRMLEIYTGFEGISTLVDVGGGSGR----NLELIISKY---PLIKGINFDL 241 (372)
T ss_dssp HHHHHHHCCTTTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEEC
T ss_pred HHHHHHHhhccCCCCEEEEeCCCCcH----HHHHHHHHC---CCCeEEEeCh
Confidence 356777775 2455789999999986 445555442 4578998884
No 46
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=76.99 E-value=16 Score=36.71 Aligned_cols=114 Identities=20% Similarity=0.217 Sum_probs=62.0
Q ss_pred HHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCc--eeE
Q 008153 295 QAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGV--EFE 372 (576)
Q Consensus 295 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgV--pFe 372 (576)
+.|++.+.-.+..+|+|+|-|.|. +...|+.+. |.+++|+++.| ..++...+++. ..|+ .++
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---~~~~~~~~D~~-----~~~~~a~~~~~----~~~~~~~v~ 236 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGG----FAAAIARRA---PHVSATVLEMA-----GTVDTARSYLK----DEGLSDRVD 236 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEECT-----THHHHHHHHHH----HTTCTTTEE
T ss_pred HHHHHhCCCccCcEEEEeCCcCcH----HHHHHHHhC---CCCEEEEecCH-----HHHHHHHHHHH----hcCCCCceE
Confidence 567777765566799999999996 344444432 45899999852 23444444433 3344 255
Q ss_pred EeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEE-EEecC
Q 008153 373 FRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIIT-IVEQE 438 (576)
Q Consensus 373 F~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvt-lvEqe 438 (576)
|..- ++.+ .+ +. ..=+|-+...||++.+ .....+|+.+ +.|+|.-.+ ++|..
T Consensus 237 ~~~~---d~~~----~~---~~--~~D~v~~~~vl~~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 237 VVEG---DFFE----PL---PR--KADAIILSFVLLNWPD--HDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEEC---CTTS----CC---SS--CEEEEEEESCGGGSCH--HHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEeC---CCCC----CC---CC--CccEEEEcccccCCCH--HHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 5531 2211 01 11 1223334445777632 1234566665 567998644 45544
No 47
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=75.52 E-value=23 Score=33.29 Aligned_cols=113 Identities=16% Similarity=0.208 Sum_probs=63.7
Q ss_pred HHHHHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCcee
Q 008153 292 TANQAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEF 371 (576)
Q Consensus 292 tANqAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpF 371 (576)
..-+.|++.+...+.-.|+|+|.|.|. +...|+.+ |+. ++|||+.. ...++...+++. +-..
T Consensus 31 ~~~~~l~~~~~~~~~~~vLD~GcG~G~----~~~~l~~~--~~~--~v~~vD~s----~~~~~~a~~~~~------~~~~ 92 (253)
T 3g5l_A 31 GEWHELKKMLPDFNQKTVLDLGCGFGW----HCIYAAEH--GAK--KVLGIDLS----ERMLTEAKRKTT------SPVV 92 (253)
T ss_dssp HHHHHHHTTCCCCTTCEEEEETCTTCH----HHHHHHHT--TCS--EEEEEESC----HHHHHHHHHHCC------CTTE
T ss_pred hhHHHHHHhhhccCCCEEEEECCCCCH----HHHHHHHc--CCC--EEEEEECC----HHHHHHHHHhhc------cCCe
Confidence 334556666666667789999999984 55556655 222 89999842 344443333221 2233
Q ss_pred EEeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEEe
Q 008153 372 EFRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIVE 436 (576)
Q Consensus 372 eF~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlvE 436 (576)
+|.. ..++++. ... +..=+|-|...||++. ....+|+.+ +-|+|.-.+++.
T Consensus 93 ~~~~---~d~~~~~-----~~~--~~fD~v~~~~~l~~~~----~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 93 CYEQ---KAIEDIA-----IEP--DAYNVVLSSLALHYIA----SFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp EEEE---CCGGGCC-----CCT--TCEEEEEEESCGGGCS----CHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEE---cchhhCC-----CCC--CCeEEEEEchhhhhhh----hHHHHHHHHHHHcCCCcEEEEE
Confidence 4442 2223322 211 2343444455688873 255666665 568998777763
No 48
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=75.46 E-value=24 Score=33.92 Aligned_cols=125 Identities=16% Similarity=0.180 Sum_probs=65.1
Q ss_pred HHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEe
Q 008153 295 QAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFR 374 (576)
Q Consensus 295 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~ 374 (576)
+.+++.+.-...-.|+|+|.|.|.- ...|+. + ..++|||+. +...++...+++ -++. |.
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~~----~~~l~~-~----~~~v~gvD~----s~~~~~~a~~~~------~~~~--~~ 105 (279)
T 3ccf_A 47 EDLLQLLNPQPGEFILDLGCGTGQL----TEKIAQ-S----GAEVLGTDN----AATMIEKARQNY------PHLH--FD 105 (279)
T ss_dssp CHHHHHHCCCTTCEEEEETCTTSHH----HHHHHH-T----TCEEEEEES----CHHHHHHHHHHC------TTSC--EE
T ss_pred HHHHHHhCCCCCCEEEEecCCCCHH----HHHHHh-C----CCeEEEEEC----CHHHHHHHHhhC------CCCE--EE
Confidence 3456666555556899999999863 334444 2 258999984 234444333322 1333 33
Q ss_pred eeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHH-HHhcCCcEEEEEecCCCCCCchhHHHHHHH
Q 008153 375 GFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSS-IKAMRPKIITIVEQEANHNSPVFLDRFTEA 453 (576)
Q Consensus 375 ~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~-Ir~L~PkIvtlvEqeanhNsp~F~~RF~EA 453 (576)
. ...+++. . ++ ..=+|-|...||++.+ .+.+|+. .|-|+|.-.+++..-...+...+...+.+.
T Consensus 106 ~---~d~~~~~-----~-~~--~fD~v~~~~~l~~~~d----~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~ 170 (279)
T 3ccf_A 106 V---ADARNFR-----V-DK--PLDAVFSNAMLHWVKE----PEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNA 170 (279)
T ss_dssp E---CCTTTCC-----C-SS--CEEEEEEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHHHH
T ss_pred E---CChhhCC-----c-CC--CcCEEEEcchhhhCcC----HHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHH
Confidence 2 2233322 1 11 2333444556788743 3455555 477899876665432222233444444444
Q ss_pred HH
Q 008153 454 LH 455 (576)
Q Consensus 454 L~ 455 (576)
+.
T Consensus 171 ~~ 172 (279)
T 3ccf_A 171 LE 172 (279)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 49
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=74.07 E-value=3.3 Score=42.85 Aligned_cols=109 Identities=13% Similarity=0.237 Sum_probs=62.1
Q ss_pred HHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEee
Q 008153 296 AILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRG 375 (576)
Q Consensus 296 AILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~~ 375 (576)
.|++.+.-...-.|+|+|-|.|. ++..|+.+ | .++|||++. ...+ +.|+..|++..-..
T Consensus 98 ~l~~~~~~~~~~~VLDiGcG~G~----~~~~l~~~--g---~~v~gvD~s----~~~~--------~~a~~~~~~~~~~~ 156 (416)
T 4e2x_A 98 DFLATELTGPDPFIVEIGCNDGI----MLRTIQEA--G---VRHLGFEPS----SGVA--------AKAREKGIRVRTDF 156 (416)
T ss_dssp HHHHTTTCSSSCEEEEETCTTTT----THHHHHHT--T---CEEEEECCC----HHHH--------HHHHTTTCCEECSC
T ss_pred HHHHHhCCCCCCEEEEecCCCCH----HHHHHHHc--C---CcEEEECCC----HHHH--------HHHHHcCCCcceee
Confidence 45555654556689999999998 55666654 2 389999953 2223 44555566543211
Q ss_pred eecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEEe
Q 008153 376 FVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIVE 436 (576)
Q Consensus 376 v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlvE 436 (576)
+ ..-....+....+ ..=+|-+...|||+.+ ...+|+.+ +-|+|.-+++++
T Consensus 157 ~-----~~~~~~~l~~~~~--~fD~I~~~~vl~h~~d----~~~~l~~~~r~LkpgG~l~i~ 207 (416)
T 4e2x_A 157 F-----EKATADDVRRTEG--PANVIYAANTLCHIPY----VQSVLEGVDALLAPDGVFVFE 207 (416)
T ss_dssp C-----SHHHHHHHHHHHC--CEEEEEEESCGGGCTT----HHHHHHHHHHHEEEEEEEEEE
T ss_pred e-----chhhHhhcccCCC--CEEEEEECChHHhcCC----HHHHHHHHHHHcCCCeEEEEE
Confidence 1 1111111111111 3444555566888842 55666665 668998777765
No 50
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=73.21 E-value=37 Score=32.75 Aligned_cols=114 Identities=9% Similarity=0.047 Sum_probs=63.1
Q ss_pred HHHHHhh----ccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCce
Q 008153 295 QAILEAF----NNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVE 370 (576)
Q Consensus 295 qAILEA~----~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVp 370 (576)
..|++.+ .-...-+|+|+|.|.|..-..|.+.+ + .++|||+. +...++...+++ +..|++
T Consensus 68 ~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~----~----~~v~gvD~----s~~~~~~a~~~~----~~~~~~ 131 (297)
T 2o57_A 68 EWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKF----G----VSIDCLNI----APVQNKRNEEYN----NQAGLA 131 (297)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH----C----CEEEEEES----CHHHHHHHHHHH----HHHTCT
T ss_pred HHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHh----C----CEEEEEeC----CHHHHHHHHHHH----HhcCCC
Confidence 4455666 33455689999999887444444433 2 38999984 344555444443 333442
Q ss_pred --eEEeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEE-EecC
Q 008153 371 --FEFRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITI-VEQE 438 (576)
Q Consensus 371 --FeF~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtl-vEqe 438 (576)
++|.. ..+.++. ... +..=+|-+...|||+.+ ...+|+.+ |-|+|.-.++ ++..
T Consensus 132 ~~~~~~~---~d~~~~~-----~~~--~~fD~v~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~~~~~ 189 (297)
T 2o57_A 132 DNITVKY---GSFLEIP-----CED--NSYDFIWSQDAFLHSPD----KLKVFQECARVLKPRGVMAITDPM 189 (297)
T ss_dssp TTEEEEE---CCTTSCS-----SCT--TCEEEEEEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred cceEEEE---cCcccCC-----CCC--CCEeEEEecchhhhcCC----HHHHHHHHHHHcCCCeEEEEEEec
Confidence 45542 2333322 221 23445555567888754 45566655 6689976555 4443
No 51
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=73.19 E-value=22 Score=34.66 Aligned_cols=112 Identities=9% Similarity=0.084 Sum_probs=64.3
Q ss_pred HHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCce--eE
Q 008153 295 QAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVE--FE 372 (576)
Q Consensus 295 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVp--Fe 372 (576)
..|++.+.-...-+|+|+|.|.|. +...|+.+.+ .++|||+. +...++...+++ +..|++ .+
T Consensus 62 ~~~~~~~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~----s~~~~~~a~~~~----~~~~~~~~v~ 125 (302)
T 3hem_A 62 KLALDKLNLEPGMTLLDIGCGWGS----TMRHAVAEYD----VNVIGLTL----SENQYAHDKAMF----DEVDSPRRKE 125 (302)
T ss_dssp HHHHHTTCCCTTCEEEEETCTTSH----HHHHHHHHHC----CEEEEEEC----CHHHHHHHHHHH----HHSCCSSCEE
T ss_pred HHHHHHcCCCCcCEEEEeeccCcH----HHHHHHHhCC----CEEEEEEC----CHHHHHHHHHHH----HhcCCCCceE
Confidence 446666655666789999998875 4444554422 58999984 345555444443 344554 44
Q ss_pred EeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCC-----CChHHHHHHHH-HhcCCcEEEEE
Q 008153 373 FRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLAR-----PGGIEKVVSSI-KAMRPKIITIV 435 (576)
Q Consensus 373 F~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~-----~~~~d~vL~~I-r~L~PkIvtlv 435 (576)
|.. ..+.++ ++.-..++.+ ..+||+.+. ......+|+.+ +-|+|.-.+++
T Consensus 126 ~~~---~d~~~~--------~~~fD~v~~~--~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 181 (302)
T 3hem_A 126 VRI---QGWEEF--------DEPVDRIVSL--GAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLL 181 (302)
T ss_dssp EEE---CCGGGC--------CCCCSEEEEE--SCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEE
T ss_pred EEE---CCHHHc--------CCCccEEEEc--chHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence 442 233333 1111355544 457888653 13456777665 67899866654
No 52
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=73.07 E-value=33 Score=32.14 Aligned_cols=107 Identities=15% Similarity=0.136 Sum_probs=59.1
Q ss_pred HHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEee
Q 008153 296 AILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRG 375 (576)
Q Consensus 296 AILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~~ 375 (576)
.+++.+.....-+|+|+|-|.|.--..|.+.+ |..++|||+. +...++...++ .-..+|..
T Consensus 24 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-------~~~~v~~~D~----s~~~~~~a~~~--------~~~~~~~~ 84 (259)
T 2p35_A 24 DLLAQVPLERVLNGYDLGCGPGNSTELLTDRY-------GVNVITGIDS----DDDMLEKAADR--------LPNTNFGK 84 (259)
T ss_dssp HHHTTCCCSCCSSEEEETCTTTHHHHHHHHHH-------CTTSEEEEES----CHHHHHHHHHH--------STTSEEEE
T ss_pred HHHHhcCCCCCCEEEEecCcCCHHHHHHHHhC-------CCCEEEEEEC----CHHHHHHHHHh--------CCCcEEEE
Confidence 46666654555689999999987555444443 2358999984 23444333322 22234442
Q ss_pred eecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEEe
Q 008153 376 FVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIVE 436 (576)
Q Consensus 376 v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlvE 436 (576)
..++++.+ ++..=+|-|...||++.+ ...+|+.+ +-|+|.-.+++.
T Consensus 85 ---~d~~~~~~--------~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~~~ 131 (259)
T 2p35_A 85 ---ADLATWKP--------AQKADLLYANAVFQWVPD----HLAVLSQLMDQLESGGVLAVQ 131 (259)
T ss_dssp ---CCTTTCCC--------SSCEEEEEEESCGGGSTT----HHHHHHHHGGGEEEEEEEEEE
T ss_pred ---CChhhcCc--------cCCcCEEEEeCchhhCCC----HHHHHHHHHHhcCCCeEEEEE
Confidence 22333221 112333444456788732 45666666 778998666553
No 53
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=72.82 E-value=18 Score=34.52 Aligned_cols=112 Identities=16% Similarity=0.095 Sum_probs=64.7
Q ss_pred HHHHHHHhhc-cCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCce-
Q 008153 293 ANQAILEAFN-NANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVE- 370 (576)
Q Consensus 293 ANqAILEA~~-g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVp- 370 (576)
.-..+++.+. -...-+|+|+|.|.|. +...|+.+ |..++|||+. +...++...++ ++..|++
T Consensus 33 ~~~~~l~~l~~~~~~~~vLDiGcG~G~----~~~~la~~----~~~~v~gvD~----s~~~~~~a~~~----~~~~~~~~ 96 (267)
T 3kkz_A 33 VTLKALSFIDNLTEKSLIADIGCGTGG----QTMVLAGH----VTGQVTGLDF----LSGFIDIFNRN----ARQSGLQN 96 (267)
T ss_dssp HHHHHHTTCCCCCTTCEEEEETCTTCH----HHHHHHTT----CSSEEEEEES----CHHHHHHHHHH----HHHTTCTT
T ss_pred HHHHHHHhcccCCCCCEEEEeCCCCCH----HHHHHHhc----cCCEEEEEeC----CHHHHHHHHHH----HHHcCCCc
Confidence 3344555554 2345689999999885 56667766 3468999984 34455544443 3445654
Q ss_pred -eEEeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEE
Q 008153 371 -FEFRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIV 435 (576)
Q Consensus 371 -FeF~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlv 435 (576)
.+|.. ..++++. ... +..=+|-|...+|++ + .+.+|+.+ +-|+|.-++++
T Consensus 97 ~v~~~~---~d~~~~~-----~~~--~~fD~i~~~~~~~~~-~----~~~~l~~~~~~LkpgG~l~~ 148 (267)
T 3kkz_A 97 RVTGIV---GSMDDLP-----FRN--EELDLIWSEGAIYNI-G----FERGLNEWRKYLKKGGYLAV 148 (267)
T ss_dssp TEEEEE---CCTTSCC-----CCT--TCEEEEEESSCGGGT-C----HHHHHHHHGGGEEEEEEEEE
T ss_pred CcEEEE---cChhhCC-----CCC--CCEEEEEEcCCceec-C----HHHHHHHHHHHcCCCCEEEE
Confidence 55543 2333332 111 234445555667887 2 45566655 67899866654
No 54
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=71.99 E-value=24 Score=30.90 Aligned_cols=61 Identities=10% Similarity=0.063 Sum_probs=39.3
Q ss_pred HHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCce
Q 008153 295 QAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVE 370 (576)
Q Consensus 295 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVp 370 (576)
+.+++.+.-...-+|+|+|-|.|. +...|+.+. |..++|||+. +...++...+++ +..|++
T Consensus 15 ~~~~~~~~~~~~~~vldiG~G~G~----~~~~l~~~~---~~~~v~~vD~----~~~~~~~a~~~~----~~~~~~ 75 (178)
T 3hm2_A 15 ALAISALAPKPHETLWDIGGGSGS----IAIEWLRST---PQTTAVCFEI----SEERRERILSNA----INLGVS 75 (178)
T ss_dssp HHHHHHHCCCTTEEEEEESTTTTH----HHHHHHTTS---SSEEEEEECS----CHHHHHHHHHHH----HTTTCT
T ss_pred HHHHHHhcccCCCeEEEeCCCCCH----HHHHHHHHC---CCCeEEEEeC----CHHHHHHHHHHH----HHhCCC
Confidence 456666666667799999999884 555566553 4589999994 344555444443 344554
No 55
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=71.78 E-value=34 Score=30.44 Aligned_cols=111 Identities=17% Similarity=0.214 Sum_probs=60.6
Q ss_pred HHHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCc-eeE
Q 008153 294 NQAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGV-EFE 372 (576)
Q Consensus 294 NqAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgV-pFe 372 (576)
++.|++.+...+.-+|+|+|-|.|. +...|+.+ + .++|||+. +...++...+++. ..++ ..+
T Consensus 21 ~~~l~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~vD~----s~~~~~~a~~~~~----~~~~~~~~ 83 (199)
T 2xvm_A 21 HSEVLEAVKVVKPGKTLDLGCGNGR----NSLYLAAN-G----YDVDAWDK----NAMSIANVERIKS----IENLDNLH 83 (199)
T ss_dssp CHHHHHHTTTSCSCEEEEETCTTSH----HHHHHHHT-T----CEEEEEES----CHHHHHHHHHHHH----HHTCTTEE
T ss_pred cHHHHHHhhccCCCeEEEEcCCCCH----HHHHHHHC-C----CeEEEEEC----CHHHHHHHHHHHH----hCCCCCcE
Confidence 3456666664455599999999886 44456655 2 48999984 3445554444332 3343 344
Q ss_pred EeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEE
Q 008153 373 FRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITI 434 (576)
Q Consensus 373 F~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtl 434 (576)
|.. ..+.++. . .+.-..++ +...+|++.. .....+|+.+ +.|+|.-.++
T Consensus 84 ~~~---~d~~~~~-----~-~~~~D~v~--~~~~l~~~~~--~~~~~~l~~~~~~L~~gG~l~ 133 (199)
T 2xvm_A 84 TRV---VDLNNLT-----F-DRQYDFIL--STVVLMFLEA--KTIPGLIANMQRCTKPGGYNL 133 (199)
T ss_dssp EEE---CCGGGCC-----C-CCCEEEEE--EESCGGGSCG--GGHHHHHHHHHHTEEEEEEEE
T ss_pred EEE---cchhhCC-----C-CCCceEEE--EcchhhhCCH--HHHHHHHHHHHHhcCCCeEEE
Confidence 442 1222221 1 11112333 3345777642 2456667665 6679986644
No 56
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=71.33 E-value=29 Score=31.72 Aligned_cols=101 Identities=16% Similarity=0.182 Sum_probs=55.4
Q ss_pred eeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEeeeecCCCCCCC
Q 008153 306 RVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRGFVCNSLADLE 385 (576)
Q Consensus 306 ~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~~v~~~~ledl~ 385 (576)
.-+|+|+|-|.|. +...|+.+ ++ ++|||+. +...++...+++. ..+...+|.. ..+.++.
T Consensus 39 ~~~vLDlG~G~G~----~~~~l~~~--~~---~v~~vD~----s~~~~~~a~~~~~----~~~~~~~~~~---~d~~~~~ 98 (227)
T 1ve3_A 39 RGKVLDLACGVGG----FSFLLEDY--GF---EVVGVDI----SEDMIRKAREYAK----SRESNVEFIV---GDARKLS 98 (227)
T ss_dssp CCEEEEETCTTSH----HHHHHHHT--TC---EEEEEES----CHHHHHHHHHHHH----HTTCCCEEEE---CCTTSCC
T ss_pred CCeEEEEeccCCH----HHHHHHHc--CC---EEEEEEC----CHHHHHHHHHHHH----hcCCCceEEE---CchhcCC
Confidence 4589999999884 44556655 33 8999984 3445554444432 2333445543 2233322
Q ss_pred ccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEE
Q 008153 386 PDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIV 435 (576)
Q Consensus 386 ~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlv 435 (576)
+..+.-..++.|..+.+|+.. ....+|+.+ +.|+|.-++++
T Consensus 99 -----~~~~~~D~v~~~~~~~~~~~~----~~~~~l~~~~~~L~~gG~l~~ 140 (227)
T 1ve3_A 99 -----FEDKTFDYVIFIDSIVHFEPL----ELNQVFKEVRRVLKPSGKFIM 140 (227)
T ss_dssp -----SCTTCEEEEEEESCGGGCCHH----HHHHHHHHHHHHEEEEEEEEE
T ss_pred -----CCCCcEEEEEEcCchHhCCHH----HHHHHHHHHHHHcCCCcEEEE
Confidence 111112466666665555542 244566554 67899866654
No 57
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=71.10 E-value=5.7 Score=37.46 Aligned_cols=96 Identities=11% Similarity=0.148 Sum_probs=49.0
Q ss_pred eeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEeeeecCCCCCCC
Q 008153 306 RVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRGFVCNSLADLE 385 (576)
Q Consensus 306 ~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~~v~~~~ledl~ 385 (576)
.-+|+|+|.|.|. +...|+.+ | .++|||+.. ...++ .|+.. ++|... ...++.
T Consensus 42 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s----~~~~~--------~a~~~---~~~~~~---d~~~~~ 94 (240)
T 3dli_A 42 CRRVLDIGCGRGE----FLELCKEE--G---IESIGVDIN----EDMIK--------FCEGK---FNVVKS---DAIEYL 94 (240)
T ss_dssp CSCEEEETCTTTH----HHHHHHHH--T---CCEEEECSC----HHHHH--------HHHTT---SEEECS---CHHHHH
T ss_pred CCeEEEEeCCCCH----HHHHHHhC--C---CcEEEEECC----HHHHH--------HHHhh---cceeec---cHHHHh
Confidence 4579999998886 34555554 2 368999842 33333 33333 333321 111110
Q ss_pred ccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEE
Q 008153 386 PDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIV 435 (576)
Q Consensus 386 ~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlv 435 (576)
..+..+.-..++ |...|||+.+ ..+..+|+.+ +-|+|.-.+++
T Consensus 95 ---~~~~~~~fD~i~--~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~ 138 (240)
T 3dli_A 95 ---KSLPDKYLDGVM--ISHFVEHLDP--ERLFELLSLCYSKMKYSSYIVI 138 (240)
T ss_dssp ---HTSCTTCBSEEE--EESCGGGSCG--GGHHHHHHHHHHHBCTTCCEEE
T ss_pred ---hhcCCCCeeEEE--ECCchhhCCc--HHHHHHHHHHHHHcCCCcEEEE
Confidence 011111112333 3456788742 2356666665 67899755444
No 58
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=71.08 E-value=17 Score=35.75 Aligned_cols=105 Identities=13% Similarity=0.054 Sum_probs=58.1
Q ss_pred CeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCce--eEEeeeecCCCC
Q 008153 305 NRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVE--FEFRGFVCNSLA 382 (576)
Q Consensus 305 ~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVp--FeF~~v~~~~le 382 (576)
..-+|+|+|.|.|. +...||.+ ..|..++|||+. +...++...++ ++..|+. .+|.. ..+.
T Consensus 118 ~~~~vLDiGcG~G~----~~~~la~~--~~~~~~v~gvD~----s~~~~~~a~~~----~~~~~~~~~v~~~~---~d~~ 180 (305)
T 3ocj_A 118 PGCVVASVPCGWMS----ELLALDYS--ACPGVQLVGIDY----DPEALDGATRL----AAGHALAGQITLHR---QDAW 180 (305)
T ss_dssp TTCEEEETTCTTCH----HHHTSCCT--TCTTCEEEEEES----CHHHHHHHHHH----HTTSTTGGGEEEEE---CCGG
T ss_pred CCCEEEEecCCCCH----HHHHHHHh--cCCCCeEEEEEC----CHHHHHHHHHH----HHhcCCCCceEEEE---Cchh
Confidence 34579999999885 44445422 235579999984 34455444433 3444554 55543 2233
Q ss_pred CCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEE
Q 008153 383 DLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIV 435 (576)
Q Consensus 383 dl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlv 435 (576)
++. +. + ..=+|-|...+|++.+. .....+|+.+ +.|+|.-.+++
T Consensus 181 ~~~---~~---~--~fD~v~~~~~~~~~~~~-~~~~~~l~~~~~~LkpgG~l~i 225 (305)
T 3ocj_A 181 KLD---TR---E--GYDLLTSNGLNIYEPDD-ARVTELYRRFWQALKPGGALVT 225 (305)
T ss_dssp GCC---CC---S--CEEEEECCSSGGGCCCH-HHHHHHHHHHHHHEEEEEEEEE
T ss_pred cCC---cc---C--CeEEEEECChhhhcCCH-HHHHHHHHHHHHhcCCCeEEEE
Confidence 322 11 1 23344445567777542 2233466655 67899888776
No 59
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=70.94 E-value=21 Score=33.03 Aligned_cols=103 Identities=11% Similarity=0.174 Sum_probs=57.9
Q ss_pred CeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEeeeecCCCCCC
Q 008153 305 NRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRGFVCNSLADL 384 (576)
Q Consensus 305 ~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~~v~~~~ledl 384 (576)
+.-+|+|+|-|.|. +...|+.+ | .++|||+. +...++...+++. ..++..+|.. ..+.++
T Consensus 37 ~~~~vLdiG~G~G~----~~~~l~~~--~---~~~~~~D~----s~~~~~~a~~~~~----~~~~~~~~~~---~d~~~~ 96 (246)
T 1y8c_A 37 VFDDYLDLACGTGN----LTENLCPK--F---KNTWAVDL----SQEMLSEAENKFR----SQGLKPRLAC---QDISNL 96 (246)
T ss_dssp CTTEEEEETCTTST----THHHHGGG--S---SEEEEECS----CHHHHHHHHHHHH----HTTCCCEEEC---CCGGGC
T ss_pred CCCeEEEeCCCCCH----HHHHHHHC--C---CcEEEEEC----CHHHHHHHHHHHh----hcCCCeEEEe---cccccC
Confidence 55689999999987 34455554 2 47999984 3455555544443 3344445542 222222
Q ss_pred CccccccCCCCCceEEEEehh-hhhhccCCCChHHHHHHHH-HhcCCcEEEEEe
Q 008153 385 EPDMLDIRPPEVETVAVNSVF-ELHRLLARPGGIEKVVSSI-KAMRPKIITIVE 436 (576)
Q Consensus 385 ~~~~L~lr~~~~EaLaVN~~~-~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlvE 436 (576)
. .. + ..=+|-|.. .|||+... .....+|+.+ +.|+|.-+++++
T Consensus 97 ~-----~~-~--~fD~v~~~~~~l~~~~~~-~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 97 N-----IN-R--KFDLITCCLDSTNYIIDS-DDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp C-----CS-C--CEEEEEECTTGGGGCCSH-HHHHHHHHHHHTTEEEEEEEEEE
T ss_pred C-----cc-C--CceEEEEcCccccccCCH-HHHHHHHHHHHHhcCCCcEEEEE
Confidence 2 11 1 222333445 68887432 2355666665 567998777763
No 60
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=70.92 E-value=27 Score=32.75 Aligned_cols=111 Identities=20% Similarity=0.336 Sum_probs=59.1
Q ss_pred HHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEeee
Q 008153 297 ILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRGF 376 (576)
Q Consensus 297 ILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~~v 376 (576)
+++.....+.-+|+|+|.|.|. +...|+.+ + .++|||+. +...++...+++. ..++..+|..
T Consensus 33 ~~~~~~~~~~~~vLDlGcG~G~----~~~~l~~~-~----~~v~gvD~----s~~~l~~a~~~~~----~~~~~v~~~~- 94 (252)
T 1wzn_A 33 IFKEDAKREVRRVLDLACGTGI----PTLELAER-G----YEVVGLDL----HEEMLRVARRKAK----ERNLKIEFLQ- 94 (252)
T ss_dssp HHHHTCSSCCCEEEEETCTTCH----HHHHHHHT-T----CEEEEEES----CHHHHHHHHHHHH----HTTCCCEEEE-
T ss_pred HHHHhcccCCCEEEEeCCCCCH----HHHHHHHC-C----CeEEEEEC----CHHHHHHHHHHHH----hcCCceEEEE-
Confidence 3444433445689999999985 44455554 2 48999984 3455655544443 3455555543
Q ss_pred ecCCCCCCCccccccCCCCCceEEEEehhh-hhhccCCCChHHHHHHHH-HhcCCcEEEEEec
Q 008153 377 VCNSLADLEPDMLDIRPPEVETVAVNSVFE-LHRLLARPGGIEKVVSSI-KAMRPKIITIVEQ 437 (576)
Q Consensus 377 ~~~~ledl~~~~L~lr~~~~EaLaVN~~~~-Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlvEq 437 (576)
..+.++. .. + ..=+|-|.+. +|++ . ......+|+.+ +.|+|.-+++++-
T Consensus 95 --~d~~~~~-----~~-~--~fD~v~~~~~~~~~~-~-~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 95 --GDVLEIA-----FK-N--EFDAVTMFFSTIMYF-D-EEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp --SCGGGCC-----CC-S--CEEEEEECSSGGGGS-C-HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --CChhhcc-----cC-C--CccEEEEcCCchhcC-C-HHHHHHHHHHHHHHcCCCeEEEEec
Confidence 2222222 11 1 2222222222 2332 2 12356666665 6689998888753
No 61
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=70.83 E-value=11 Score=34.55 Aligned_cols=108 Identities=19% Similarity=0.274 Sum_probs=59.0
Q ss_pred HHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEe
Q 008153 295 QAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFR 374 (576)
Q Consensus 295 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~ 374 (576)
..+++.+.....-.|+|+|.|.|. +...|+.+ + .++|||+. +...++...+++. -++ +|.
T Consensus 35 ~~~l~~~~~~~~~~vLDiGcG~G~----~~~~l~~~-~----~~v~~vD~----s~~~~~~a~~~~~-----~~~--~~~ 94 (220)
T 3hnr_A 35 EDILEDVVNKSFGNVLEFGVGTGN----LTNKLLLA-G----RTVYGIEP----SREMRMIAKEKLP-----KEF--SIT 94 (220)
T ss_dssp HHHHHHHHHTCCSEEEEECCTTSH----HHHHHHHT-T----CEEEEECS----CHHHHHHHHHHSC-----TTC--CEE
T ss_pred HHHHHHhhccCCCeEEEeCCCCCH----HHHHHHhC-C----CeEEEEeC----CHHHHHHHHHhCC-----Cce--EEE
Confidence 456666665567799999999985 55566665 2 48999984 2344433332221 123 333
Q ss_pred eeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEE
Q 008153 375 GFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIV 435 (576)
Q Consensus 375 ~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlv 435 (576)
. ..+.++.. . . .-..++.+ ..||++.+. ....+|+.+ +.|+|.-++++
T Consensus 95 ~---~d~~~~~~---~-~--~fD~v~~~--~~l~~~~~~--~~~~~l~~~~~~LkpgG~l~i 143 (220)
T 3hnr_A 95 E---GDFLSFEV---P-T--SIDTIVST--YAFHHLTDD--EKNVAIAKYSQLLNKGGKIVF 143 (220)
T ss_dssp S---CCSSSCCC---C-S--CCSEEEEE--SCGGGSCHH--HHHHHHHHHHHHSCTTCEEEE
T ss_pred e---CChhhcCC---C-C--CeEEEEEC--cchhcCChH--HHHHHHHHHHHhcCCCCEEEE
Confidence 2 23333321 1 1 11354444 457877431 122355554 67899866554
No 62
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=70.28 E-value=32 Score=33.51 Aligned_cols=111 Identities=14% Similarity=0.073 Sum_probs=60.1
Q ss_pred CCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEeeeecCCCCC
Q 008153 304 ANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRGFVCNSLAD 383 (576)
Q Consensus 304 ~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~~v~~~~led 383 (576)
...-+|+|+|.|.|. +...|+.+- ++..++|||+. +...++...+++... ....-..+|.. ..+++
T Consensus 35 ~~~~~vLDiGcG~G~----~~~~la~~~--~~~~~v~gvD~----s~~~~~~a~~~~~~~-~~~~~~v~~~~---~d~~~ 100 (299)
T 3g5t_A 35 GERKLLVDVGCGPGT----ATLQMAQEL--KPFEQIIGSDL----SATMIKTAEVIKEGS-PDTYKNVSFKI---SSSDD 100 (299)
T ss_dssp SCCSEEEEETCTTTH----HHHHHHHHS--SCCSEEEEEES----CHHHHHHHHHHHHHC-C-CCTTEEEEE---CCTTC
T ss_pred CCCCEEEEECCCCCH----HHHHHHHhC--CCCCEEEEEeC----CHHHHHHHHHHHHhc-cCCCCceEEEE---cCHHh
Confidence 466789999999885 444455321 24468999984 345555544444332 01123445543 23444
Q ss_pred CCccc-cccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEE
Q 008153 384 LEPDM-LDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIV 435 (576)
Q Consensus 384 l~~~~-L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlv 435 (576)
+.... ..+.. +..=+|-|...||++ + ...+|+.+ +-|+|.-++++
T Consensus 101 ~~~~~~~~~~~--~~fD~V~~~~~l~~~-~----~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 101 FKFLGADSVDK--QKIDMITAVECAHWF-D----FEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp CGGGCTTTTTS--SCEEEEEEESCGGGS-C----HHHHHHHHHHHEEEEEEEEE
T ss_pred CCccccccccC--CCeeEEeHhhHHHHh-C----HHHHHHHHHHhcCCCcEEEE
Confidence 33211 01111 245555566678888 3 45555554 66899876654
No 63
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=68.44 E-value=21 Score=32.24 Aligned_cols=111 Identities=12% Similarity=0.202 Sum_probs=60.3
Q ss_pred CeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCc-eeEEeeeecCCCCC
Q 008153 305 NRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGV-EFEFRGFVCNSLAD 383 (576)
Q Consensus 305 ~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgV-pFeF~~v~~~~led 383 (576)
+.-+|+|+|.|.|.- ...++.+. .-++|||+. +...++.+.+++ +..++ ..+|.. ..+.+
T Consensus 44 ~~~~vLDlgcG~G~~----~~~~~~~~----~~~v~~vD~----~~~~~~~a~~~~----~~~~~~~v~~~~---~d~~~ 104 (189)
T 3p9n_A 44 TGLAVLDLYAGSGAL----GLEALSRG----AASVLFVES----DQRSAAVIARNI----EALGLSGATLRR---GAVAA 104 (189)
T ss_dssp TTCEEEEETCTTCHH----HHHHHHTT----CSEEEEEEC----CHHHHHHHHHHH----HHHTCSCEEEEE---SCHHH
T ss_pred CCCEEEEeCCCcCHH----HHHHHHCC----CCeEEEEEC----CHHHHHHHHHHH----HHcCCCceEEEE---ccHHH
Confidence 334799999998852 22233342 348999984 345565554443 33344 344432 12222
Q ss_pred CCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHHHh---cCCcEEEEEecCCCCC
Q 008153 384 LEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSIKA---MRPKIITIVEQEANHN 442 (576)
Q Consensus 384 l~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~Ir~---L~PkIvtlvEqeanhN 442 (576)
+.. ....+.-..++.|..+ |+.. ...+.+|..+++ |+|.-++++|.+....
T Consensus 105 ~~~---~~~~~~fD~i~~~~p~--~~~~---~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~~ 158 (189)
T 3p9n_A 105 VVA---AGTTSPVDLVLADPPY--NVDS---ADVDAILAALGTNGWTREGTVAVVERATTCA 158 (189)
T ss_dssp HHH---HCCSSCCSEEEECCCT--TSCH---HHHHHHHHHHHHSSSCCTTCEEEEEEETTSC
T ss_pred HHh---hccCCCccEEEECCCC--Ccch---hhHHHHHHHHHhcCccCCCeEEEEEecCCCC
Confidence 211 0111112477777663 3211 246677877765 9999999887765543
No 64
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=68.10 E-value=19 Score=34.76 Aligned_cols=110 Identities=7% Similarity=0.049 Sum_probs=59.0
Q ss_pred HHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCc--eeE
Q 008153 295 QAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGV--EFE 372 (576)
Q Consensus 295 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgV--pFe 372 (576)
..|++.+.-...-+|+|+|.|.|. +...|+.+.+ .++|||+. +...++...+++ +..|+ ..+
T Consensus 54 ~~~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~~----~~v~gvd~----s~~~~~~a~~~~----~~~~~~~~~~ 117 (287)
T 1kpg_A 54 DLALGKLGLQPGMTLLDVGCGWGA----TMMRAVEKYD----VNVVGLTL----SKNQANHVQQLV----ANSENLRSKR 117 (287)
T ss_dssp HHHHTTTTCCTTCEEEEETCTTSH----HHHHHHHHHC----CEEEEEES----CHHHHHHHHHHH----HTCCCCSCEE
T ss_pred HHHHHHcCCCCcCEEEEECCcccH----HHHHHHHHcC----CEEEEEEC----CHHHHHHHHHHH----HhcCCCCCeE
Confidence 345666654556689999998876 4445553332 28999984 344554444443 33343 234
Q ss_pred EeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEE
Q 008153 373 FRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIV 435 (576)
Q Consensus 373 F~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlv 435 (576)
|.. ..++++. +.-..++.+ ..|||+.. .....+|+.+ +-|+|.-.+++
T Consensus 118 ~~~---~d~~~~~--------~~fD~v~~~--~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~ 166 (287)
T 1kpg_A 118 VLL---AGWEQFD--------EPVDRIVSI--GAFEHFGH--ERYDAFFSLAHRLLPADGVMLL 166 (287)
T ss_dssp EEE---SCGGGCC--------CCCSEEEEE--SCGGGTCT--TTHHHHHHHHHHHSCTTCEEEE
T ss_pred EEE---CChhhCC--------CCeeEEEEe--CchhhcCh--HHHHHHHHHHHHhcCCCCEEEE
Confidence 432 2233332 111344433 45777743 2345566655 67899755554
No 65
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=67.60 E-value=19 Score=36.41 Aligned_cols=42 Identities=12% Similarity=0.063 Sum_probs=27.8
Q ss_pred HHHHhh--ccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCC
Q 008153 296 AILEAF--NNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGP 344 (576)
Q Consensus 296 AILEA~--~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~ 344 (576)
.|++.+ .=.+.-+|+|+|-|.|. +...|+.+- |.+++|+++.
T Consensus 182 ~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~ 225 (358)
T 1zg3_A 182 LVLQENKRVFEGLESLVDVGGGTGG----VTKLIHEIF---PHLKCTVFDQ 225 (358)
T ss_dssp HHHHHTHHHHHTCSEEEEETCTTSH----HHHHHHHHC---TTSEEEEEEC
T ss_pred HHHHhcchhccCCCEEEEECCCcCH----HHHHHHHHC---CCCeEEEecc
Confidence 566655 11234589999999986 455555442 4578999985
No 66
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=65.68 E-value=15 Score=35.89 Aligned_cols=116 Identities=12% Similarity=0.129 Sum_probs=61.6
Q ss_pred HHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEe
Q 008153 295 QAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFR 374 (576)
Q Consensus 295 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~ 374 (576)
..+++.+..... .|+|+|.|.|. +...|+.+ + .++|||+. +...++...+++.+....+....+|.
T Consensus 73 ~~~~~~~~~~~~-~vLDlGcG~G~----~~~~l~~~-~----~~v~gvD~----s~~~~~~a~~~~~~~~~~~~~~v~~~ 138 (299)
T 3g2m_A 73 REFATRTGPVSG-PVLELAAGMGR----LTFPFLDL-G----WEVTALEL----STSVLAAFRKRLAEAPADVRDRCTLV 138 (299)
T ss_dssp HHHHHHHCCCCS-CEEEETCTTTT----THHHHHTT-T----CCEEEEES----CHHHHHHHHHHHHTSCHHHHTTEEEE
T ss_pred HHHHHhhCCCCC-cEEEEeccCCH----HHHHHHHc-C----CeEEEEEC----CHHHHHHHHHHHhhcccccccceEEE
Confidence 345555554434 89999999998 55556655 2 58999984 34556555554432211111234444
Q ss_pred eeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEEe
Q 008153 375 GFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIVE 436 (576)
Q Consensus 375 ~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlvE 436 (576)
. ..+.++. . ++ .=-+||.+...+|++. +..+..+|+.+ +.|+|.-.++++
T Consensus 139 ~---~d~~~~~-----~-~~-~fD~v~~~~~~~~~~~--~~~~~~~l~~~~~~L~pgG~l~~~ 189 (299)
T 3g2m_A 139 Q---GDMSAFA-----L-DK-RFGTVVISSGSINELD--EADRRGLYASVREHLEPGGKFLLS 189 (299)
T ss_dssp E---CBTTBCC-----C-SC-CEEEEEECHHHHTTSC--HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred e---CchhcCC-----c-CC-CcCEEEECCcccccCC--HHHHHHHHHHHHHHcCCCcEEEEE
Confidence 3 2233322 1 11 1123343334455542 12356777766 678998777664
No 67
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=65.14 E-value=32 Score=31.07 Aligned_cols=108 Identities=21% Similarity=0.196 Sum_probs=60.0
Q ss_pred HHHHHHhhcc-CCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcC-cee
Q 008153 294 NQAILEAFNN-ANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIG-VEF 371 (576)
Q Consensus 294 NqAILEA~~g-~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slg-VpF 371 (576)
...|++.+.. ...-+|+|+|.|.|. +...|+.+ | .++|||+.. ...+ +.|+..+ -..
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~----~~~~l~~~--~---~~v~~~D~s----~~~~--------~~a~~~~~~~~ 92 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGY----WTRHLSGL--A---DRVTALDGS----AEMI--------AEAGRHGLDNV 92 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSH----HHHHHHHH--S---SEEEEEESC----HHHH--------HHHGGGCCTTE
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCH----HHHHHHhc--C---CeEEEEeCC----HHHH--------HHHHhcCCCCe
Confidence 4567777752 333599999999986 44445544 2 489999842 2333 3344444 234
Q ss_pred EEeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEE
Q 008153 372 EFRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIV 435 (576)
Q Consensus 372 eF~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlv 435 (576)
+|.. ..+.++ .. ++..=+|-|...||++.+ ..+..+|+.+ +-|+|.-++++
T Consensus 93 ~~~~---~d~~~~------~~--~~~~D~v~~~~~l~~~~~--~~~~~~l~~~~~~L~pgG~l~~ 144 (218)
T 3ou2_A 93 EFRQ---QDLFDW------TP--DRQWDAVFFAHWLAHVPD--DRFEAFWESVRSAVAPGGVVEF 144 (218)
T ss_dssp EEEE---CCTTSC------CC--SSCEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEe---cccccC------CC--CCceeEEEEechhhcCCH--HHHHHHHHHHHHHcCCCeEEEE
Confidence 4442 223332 11 113334445567888753 1246666665 67899765554
No 68
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=65.09 E-value=45 Score=30.96 Aligned_cols=101 Identities=14% Similarity=0.059 Sum_probs=55.6
Q ss_pred eEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEeeeecCCCCCCCc
Q 008153 307 VHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRGFVCNSLADLEP 386 (576)
Q Consensus 307 VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~~v~~~~ledl~~ 386 (576)
-.|+|+|.|.|. +...|+. +..++|||+. +...++...+++.+.- ..-..+|.. ..+.++.+
T Consensus 68 ~~vLDiGcG~G~----~~~~l~~-----~~~~v~gvD~----s~~~~~~a~~~~~~~~--~~~~v~~~~---~d~~~~~~ 129 (235)
T 3lcc_A 68 GRALVPGCGGGH----DVVAMAS-----PERFVVGLDI----SESALAKANETYGSSP--KAEYFSFVK---EDVFTWRP 129 (235)
T ss_dssp EEEEEETCTTCH----HHHHHCB-----TTEEEEEECS----CHHHHHHHHHHHTTSG--GGGGEEEEC---CCTTTCCC
T ss_pred CCEEEeCCCCCH----HHHHHHh-----CCCeEEEEEC----CHHHHHHHHHHhhccC--CCcceEEEE---CchhcCCC
Confidence 499999999885 4445554 3468999994 3455555544443211 112244442 23333221
Q ss_pred cccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHHH-hcCCcEEEEE
Q 008153 387 DMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSIK-AMRPKIITIV 435 (576)
Q Consensus 387 ~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~Ir-~L~PkIvtlv 435 (576)
. +..=+|-|...||++. +.....+|+.++ .|+|.-.+++
T Consensus 130 ~--------~~fD~v~~~~~l~~~~--~~~~~~~l~~~~~~LkpgG~l~~ 169 (235)
T 3lcc_A 130 T--------ELFDLIFDYVFFCAIE--PEMRPAWAKSMYELLKPDGELIT 169 (235)
T ss_dssp S--------SCEEEEEEESSTTTSC--GGGHHHHHHHHHHHEEEEEEEEE
T ss_pred C--------CCeeEEEEChhhhcCC--HHHHHHHHHHHHHHCCCCcEEEE
Confidence 1 1222333445577774 234667777764 5899877665
No 69
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=64.32 E-value=13 Score=35.88 Aligned_cols=121 Identities=13% Similarity=0.099 Sum_probs=63.9
Q ss_pred HHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcC-ceeEEe
Q 008153 296 AILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIG-VEFEFR 374 (576)
Q Consensus 296 AILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slg-VpFeF~ 374 (576)
.|++.+.....-+|+|+|.|.|. +...|+.+ |+ ++|||+. +...++...+++.+.....+ ..++|.
T Consensus 48 ~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~----s~~~l~~a~~~~~~~~~~~~~~~~~~~ 114 (293)
T 3thr_A 48 WLLGLLRQHGCHRVLDVACGTGV----DSIMLVEE--GF---SVTSVDA----SDKMLKYALKERWNRRKEPAFDKWVIE 114 (293)
T ss_dssp HHHHHHHHTTCCEEEETTCTTSH----HHHHHHHT--TC---EEEEEES----CHHHHHHHHHHHHHTTTSHHHHTCEEE
T ss_pred HHHHHhcccCCCEEEEecCCCCH----HHHHHHHC--CC---eEEEEEC----CHHHHHHHHHhhhhcccccccceeeEe
Confidence 34444544456789999999986 34445554 32 8999984 34556555554432211111 123333
Q ss_pred eeecCCCCCCCccccccCCCCCceEEEEeh-hhhhhccC---CCChHHHHHHHH-HhcCCcEEEEEe
Q 008153 375 GFVCNSLADLEPDMLDIRPPEVETVAVNSV-FELHRLLA---RPGGIEKVVSSI-KAMRPKIITIVE 436 (576)
Q Consensus 375 ~v~~~~ledl~~~~L~lr~~~~EaLaVN~~-~~Lh~L~~---~~~~~d~vL~~I-r~L~PkIvtlvE 436 (576)
. ..+.++... + .. ++..=+|-|. ..|||+.+ .......+|+.+ +.|+|.-+++++
T Consensus 115 ~---~d~~~~~~~-~-~~--~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (293)
T 3thr_A 115 E---ANWLTLDKD-V-PA--GDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVID 174 (293)
T ss_dssp E---CCGGGHHHH-S-CC--TTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred e---cChhhCccc-c-cc--CCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 2 122222111 1 11 1234444454 67888865 123356677766 668998766653
No 70
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=64.16 E-value=33 Score=36.89 Aligned_cols=119 Identities=10% Similarity=0.065 Sum_probs=65.1
Q ss_pred HHHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHH---HHHhHcCc-
Q 008153 294 NQAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLA---QLADTIGV- 369 (576)
Q Consensus 294 NqAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~---~fA~slgV- 369 (576)
-..|++.+.-...=+|+|+|-|.|. +.-.+|.+.+ .-+++||+. +...++-..+++. +.++..|+
T Consensus 162 i~~il~~l~l~~gd~VLDLGCGtG~----l~l~lA~~~g---~~kVvGIDi----S~~~lelAr~n~e~frkr~~~~Gl~ 230 (438)
T 3uwp_A 162 VAQMIDEIKMTDDDLFVDLGSGVGQ----VVLQVAAATN---CKHHYGVEK----ADIPAKYAETMDREFRKWMKWYGKK 230 (438)
T ss_dssp HHHHHHHHCCCTTCEEEEESCTTSH----HHHHHHHHCC---CSEEEEEEC----CHHHHHHHHHHHHHHHHHHHHHTBC
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCH----HHHHHHHHCC---CCEEEEEeC----CHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3557777765555679999999886 4444454432 237999984 2333333333332 23556665
Q ss_pred --eeEEeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHHHhcCCcEEEEE
Q 008153 370 --EFEFRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSIKAMRPKIITIV 435 (576)
Q Consensus 370 --pFeF~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~Ir~L~PkIvtlv 435 (576)
.++|.. ..+.++.... .+.. -.++++|..+ + .+.....+....|.|+|.-.+++
T Consensus 231 ~~rVefi~---GD~~~lp~~d-~~~~--aDVVf~Nn~~--F----~pdl~~aL~Ei~RvLKPGGrIVs 286 (438)
T 3uwp_A 231 HAEYTLER---GDFLSEEWRE-RIAN--TSVIFVNNFA--F----GPEVDHQLKERFANMKEGGRIVS 286 (438)
T ss_dssp CCEEEEEE---CCTTSHHHHH-HHHT--CSEEEECCTT--C----CHHHHHHHHHHHTTSCTTCEEEE
T ss_pred CCCeEEEE---CcccCCcccc-ccCC--ccEEEEcccc--c----CchHHHHHHHHHHcCCCCcEEEE
Confidence 455542 3333332110 0111 1477788653 2 12344556566789999877775
No 71
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=63.32 E-value=71 Score=29.77 Aligned_cols=102 Identities=13% Similarity=0.196 Sum_probs=55.2
Q ss_pred CCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEeeeecCCCCC
Q 008153 304 ANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRGFVCNSLAD 383 (576)
Q Consensus 304 ~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~~v~~~~led 383 (576)
...-+|+|+|-|.|.- ...|+.+ + .++|||+. +...++...+++ +...-.++|.. ..+++
T Consensus 38 ~~~~~vLDiG~G~G~~----~~~l~~~-~----~~v~~vD~----s~~~~~~a~~~~----~~~~~~~~~~~---~d~~~ 97 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRI----ALPLIAR-G----YRYIALDA----DAAMLEVFRQKI----AGVDRKVQVVQ---ADARA 97 (263)
T ss_dssp SSCCEEEEETCTTSTT----HHHHHTT-T----CEEEEEES----CHHHHHHHHHHT----TTSCTTEEEEE---SCTTS
T ss_pred CCCCEEEEeCCcCCHH----HHHHHHC-C----CEEEEEEC----CHHHHHHHHHHh----hccCCceEEEE---ccccc
Confidence 3456899999999873 3345554 2 48999984 344454443333 11222344542 23333
Q ss_pred CCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEEe
Q 008153 384 LEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIVE 436 (576)
Q Consensus 384 l~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlvE 436 (576)
+. ...+ ..=+|-+...+|++.+ ...+|+.+ +-|+|.-.+++.
T Consensus 98 ~~-----~~~~--~fD~v~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 98 IP-----LPDE--SVHGVIVVHLWHLVPD----WPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp CC-----SCTT--CEEEEEEESCGGGCTT----HHHHHHHHHHHEEEEEEEEEE
T ss_pred CC-----CCCC--CeeEEEECCchhhcCC----HHHHHHHHHHHCCCCcEEEEE
Confidence 22 2111 2333444456788743 45566554 678998766654
No 72
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=62.97 E-value=37 Score=29.66 Aligned_cols=102 Identities=16% Similarity=0.110 Sum_probs=56.6
Q ss_pred HHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEee
Q 008153 296 AILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRG 375 (576)
Q Consensus 296 AILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~~ 375 (576)
.+++.+.-.+.-.|+|+|.|.|. +...|+.+. . ++|||+. +...++...++ .-..+|..
T Consensus 8 ~~~~~~~~~~~~~vLDiG~G~G~----~~~~l~~~~----~-~v~~vD~----s~~~~~~a~~~--------~~~v~~~~ 66 (170)
T 3i9f_A 8 EYLPNIFEGKKGVIVDYGCGNGF----YCKYLLEFA----T-KLYCIDI----NVIALKEVKEK--------FDSVITLS 66 (170)
T ss_dssp TTHHHHHSSCCEEEEEETCTTCT----THHHHHTTE----E-EEEEECS----CHHHHHHHHHH--------CTTSEEES
T ss_pred HHHHhcCcCCCCeEEEECCCCCH----HHHHHHhhc----C-eEEEEeC----CHHHHHHHHHh--------CCCcEEEe
Confidence 35566655667789999999987 445555542 2 8999994 23444433333 11233332
Q ss_pred eecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEE
Q 008153 376 FVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIV 435 (576)
Q Consensus 376 v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlv 435 (576)
. + +....+ ..=+|-+...+|++.+ ...+|+.+ +.|+|.-.+++
T Consensus 67 --~----d-----~~~~~~--~~D~v~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~~ 110 (170)
T 3i9f_A 67 --D----P-----KEIPDN--SVDFILFANSFHDMDD----KQHVISEVKRILKDDGRVII 110 (170)
T ss_dssp --S----G-----GGSCTT--CEEEEEEESCSTTCSC----HHHHHHHHHHHEEEEEEEEE
T ss_pred --C----C-----CCCCCC--ceEEEEEccchhcccC----HHHHHHHHHHhcCCCCEEEE
Confidence 1 1 222221 2333334456777732 44555554 77899766664
No 73
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=61.60 E-value=28 Score=31.99 Aligned_cols=106 Identities=10% Similarity=0.103 Sum_probs=57.3
Q ss_pred HHHHHhhcc-CCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEE
Q 008153 295 QAILEAFNN-ANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEF 373 (576)
Q Consensus 295 qAILEA~~g-~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF 373 (576)
+.+++.+.. .+.-+|+|+|-|.|. +...|+.+ ++ ++|||+.. ...++...+++.. + .+|
T Consensus 31 ~~~~~~l~~~~~~~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~s----~~~~~~a~~~~~~-----~--v~~ 90 (250)
T 2p7i_A 31 PFMVRAFTPFFRPGNLLELGSFKGD----FTSRLQEH--FN---DITCVEAS----EEAISHAQGRLKD-----G--ITY 90 (250)
T ss_dssp HHHHHHHGGGCCSSCEEEESCTTSH----HHHHHTTT--CS---CEEEEESC----HHHHHHHHHHSCS-----C--EEE
T ss_pred HHHHHHHHhhcCCCcEEEECCCCCH----HHHHHHHh--CC---cEEEEeCC----HHHHHHHHHhhhC-----C--eEE
Confidence 345555542 233469999999885 45566654 33 79999842 3444333322211 3 344
Q ss_pred eeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHHH--hcCCcEEEEE
Q 008153 374 RGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSIK--AMRPKIITIV 435 (576)
Q Consensus 374 ~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~Ir--~L~PkIvtlv 435 (576)
.. ...+++. + ++..=+|-|...|||+.+ .+.+|+.++ -|+|.-.+++
T Consensus 91 ~~---~d~~~~~-------~-~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~~LkpgG~l~i 139 (250)
T 2p7i_A 91 IH---SRFEDAQ-------L-PRRYDNIVLTHVLEHIDD----PVALLKRINDDWLAEGGRLFL 139 (250)
T ss_dssp EE---SCGGGCC-------C-SSCEEEEEEESCGGGCSS----HHHHHHHHHHTTEEEEEEEEE
T ss_pred EE---ccHHHcC-------c-CCcccEEEEhhHHHhhcC----HHHHHHHHHHHhcCCCCEEEE
Confidence 32 2233321 1 123434445567888843 367777765 6799766554
No 74
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=61.08 E-value=60 Score=30.69 Aligned_cols=111 Identities=18% Similarity=0.239 Sum_probs=61.6
Q ss_pred HHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCce--eE
Q 008153 295 QAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVE--FE 372 (576)
Q Consensus 295 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVp--Fe 372 (576)
..|++.+.-...-+|+|+|.|.|. +...|+.+.+ .++|||+. +...++...+++ +..|++ .+
T Consensus 51 ~~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~~----~~v~gvD~----s~~~~~~a~~~~----~~~~~~~~~~ 114 (273)
T 3bus_A 51 DEMIALLDVRSGDRVLDVGCGIGK----PAVRLATARD----VRVTGISI----SRPQVNQANARA----TAAGLANRVT 114 (273)
T ss_dssp HHHHHHSCCCTTCEEEEESCTTSH----HHHHHHHHSC----CEEEEEES----CHHHHHHHHHHH----HHTTCTTTEE
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCH----HHHHHHHhcC----CEEEEEeC----CHHHHHHHHHHH----HhcCCCcceE
Confidence 455666654556699999999886 3444554432 58999984 344554443333 334543 45
Q ss_pred EeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEE
Q 008153 373 FRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIV 435 (576)
Q Consensus 373 F~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlv 435 (576)
|.. ..+.++. ... +..=+|-+...|||+.+ ...+|+.+ +-|+|.-.+++
T Consensus 115 ~~~---~d~~~~~-----~~~--~~fD~v~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~i 164 (273)
T 3bus_A 115 FSY---ADAMDLP-----FED--ASFDAVWALESLHHMPD----RGRALREMARVLRPGGTVAI 164 (273)
T ss_dssp EEE---CCTTSCC-----SCT--TCEEEEEEESCTTTSSC----HHHHHHHHHTTEEEEEEEEE
T ss_pred EEE---CccccCC-----CCC--CCccEEEEechhhhCCC----HHHHHHHHHHHcCCCeEEEE
Confidence 543 2333322 111 13334445556787743 35666665 56799865553
No 75
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=60.87 E-value=56 Score=31.34 Aligned_cols=109 Identities=14% Similarity=0.168 Sum_probs=60.4
Q ss_pred HHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCce--eEEe
Q 008153 297 ILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVE--FEFR 374 (576)
Q Consensus 297 ILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVp--FeF~ 374 (576)
+++.+... .-+|+|+|.|.|. +...|+.+ + .++|||+. +...++...+++ +..|++ .+|.
T Consensus 61 ~l~~~~~~-~~~vLDiGcG~G~----~~~~l~~~-~----~~v~gvD~----s~~~~~~a~~~~----~~~~~~~~v~~~ 122 (285)
T 4htf_A 61 VLAEMGPQ-KLRVLDAGGGEGQ----TAIKMAER-G----HQVILCDL----SAQMIDRAKQAA----EAKGVSDNMQFI 122 (285)
T ss_dssp HHHHTCSS-CCEEEEETCTTCH----HHHHHHHT-T----CEEEEEES----CHHHHHHHHHHH----HC-CCGGGEEEE
T ss_pred HHHhcCCC-CCEEEEeCCcchH----HHHHHHHC-C----CEEEEEEC----CHHHHHHHHHHH----HhcCCCcceEEE
Confidence 44444433 5689999999985 55666665 2 48999984 344555444443 334543 4444
Q ss_pred eeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEEe
Q 008153 375 GFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIVE 436 (576)
Q Consensus 375 ~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlvE 436 (576)
. ..++++.. ... +..=+|-|...||++.+ ...+|+.+ +-|+|.-++++.
T Consensus 123 ~---~d~~~~~~----~~~--~~fD~v~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~~ 172 (285)
T 4htf_A 123 H---CAAQDVAS----HLE--TPVDLILFHAVLEWVAD----PRSVLQTLWSVLRPGGVLSLM 172 (285)
T ss_dssp E---SCGGGTGG----GCS--SCEEEEEEESCGGGCSC----HHHHHHHHHHTEEEEEEEEEE
T ss_pred E---cCHHHhhh----hcC--CCceEEEECchhhcccC----HHHHHHHHHHHcCCCeEEEEE
Confidence 3 23333321 111 13334444566788743 34555554 678998777653
No 76
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=59.98 E-value=24 Score=36.30 Aligned_cols=113 Identities=15% Similarity=0.195 Sum_probs=63.4
Q ss_pred HHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCce--eE
Q 008153 295 QAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVE--FE 372 (576)
Q Consensus 295 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVp--Fe 372 (576)
++|++...-.+.-.|+|+|-|.|. +...|+.+ |. -++|||+.. ..++.. .+.++..|++ .+
T Consensus 53 ~~i~~~~~~~~~~~VLDlGcGtG~----ls~~la~~--g~--~~V~gvD~s-----~~~~~a----~~~~~~~~~~~~v~ 115 (376)
T 3r0q_C 53 NAVFQNKHHFEGKTVLDVGTGSGI----LAIWSAQA--GA--RKVYAVEAT-----KMADHA----RALVKANNLDHIVE 115 (376)
T ss_dssp HHHHTTTTTTTTCEEEEESCTTTH----HHHHHHHT--TC--SEEEEEESS-----TTHHHH----HHHHHHTTCTTTEE
T ss_pred HHHHhccccCCCCEEEEeccCcCH----HHHHHHhc--CC--CEEEEEccH-----HHHHHH----HHHHHHcCCCCeEE
Confidence 445554444455689999999983 44455655 22 389999953 233322 2334445554 44
Q ss_pred EeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEEe
Q 008153 373 FRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIVE 436 (576)
Q Consensus 373 F~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlvE 436 (576)
|.. ..++++... +.-..++.|.+ .|.+ .....++.+|..+ +-|+|.-+++..
T Consensus 116 ~~~---~d~~~~~~~------~~~D~Iv~~~~--~~~l-~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 116 VIE---GSVEDISLP------EKVDVIISEWM--GYFL-LRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp EEE---SCGGGCCCS------SCEEEEEECCC--BTTB-TTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred EEE---CchhhcCcC------CcceEEEEcCh--hhcc-cchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 442 334443321 11135555443 2333 3334578899888 889999887754
No 77
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=59.68 E-value=22 Score=34.49 Aligned_cols=44 Identities=18% Similarity=0.024 Sum_probs=27.7
Q ss_pred CeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHH
Q 008153 305 NRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKL 360 (576)
Q Consensus 305 ~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL 360 (576)
+.-.|+|+|.|.|. +..|. +.+++ -+||||+. +...++...+++
T Consensus 71 ~~~~vLDiGcG~G~-~~~l~---~~~~~----~~v~gvD~----s~~~l~~a~~~~ 114 (289)
T 2g72_A 71 SGRTLIDIGSGPTV-YQLLS---ACSHF----EDITMTDF----LEVNRQELGRWL 114 (289)
T ss_dssp CCSEEEEETCTTCC-GGGTT---GGGGC----SEEEEECS----CHHHHHHHHHHH
T ss_pred CCCeEEEECCCcCh-HHHHh---hccCC----CeEEEeCC----CHHHHHHHHHHH
Confidence 44689999999998 54322 22222 38999995 345565555544
No 78
>1zs4_A Regulatory protein CII; helix-turn-helix, transcription activator, transcription-DNA; HET: DNA; 1.70A {Enterobacteria phage lambda} SCOP: a.35.1.9
Probab=59.60 E-value=3.4 Score=34.72 Aligned_cols=24 Identities=33% Similarity=0.531 Sum_probs=21.6
Q ss_pred chhhhhhcCCccccccHHHHHHHH
Q 008153 42 MDELLEVLGYKVRSSEMADVAQKL 65 (576)
Q Consensus 42 ~d~~la~~gykv~ssd~~~vaqkl 65 (576)
|=.|||+|||||...||+.++++.
T Consensus 52 ~~~lLa~Lglkvv~~e~~~~~k~~ 75 (83)
T 1zs4_A 52 FSMLLAVLEWGVVDDDMARLARQV 75 (83)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCcHHHHHHHHHH
Confidence 567999999999999999999875
No 79
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=59.15 E-value=56 Score=30.07 Aligned_cols=108 Identities=16% Similarity=0.225 Sum_probs=58.8
Q ss_pred HHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEeee
Q 008153 297 ILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRGF 376 (576)
Q Consensus 297 ILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~~v 376 (576)
|++.+... -.|+|+|-|.|. +...|+.+ .++|||+. +...++...+++. ..+...+|...
T Consensus 27 ~~~~~~~~--~~vLdiG~G~G~----~~~~l~~~------~~v~~vD~----s~~~~~~a~~~~~----~~~~~~~~~~~ 86 (243)
T 3d2l_A 27 VLEQVEPG--KRIADIGCGTGT----ATLLLADH------YEVTGVDL----SEEMLEIAQEKAM----ETNRHVDFWVQ 86 (243)
T ss_dssp HHHHSCTT--CEEEEESCTTCH----HHHHHTTT------SEEEEEES----CHHHHHHHHHHHH----HTTCCCEEEEC
T ss_pred HHHHcCCC--CeEEEecCCCCH----HHHHHhhC------CeEEEEEC----CHHHHHHHHHhhh----hcCCceEEEEc
Confidence 44445432 479999999886 45566655 58999984 3455554444433 23444455431
Q ss_pred ecCCCCCCCccccccCCCCCceEEEEehh-hhhhccCCCChHHHHHHHH-HhcCCcEEEEEe
Q 008153 377 VCNSLADLEPDMLDIRPPEVETVAVNSVF-ELHRLLARPGGIEKVVSSI-KAMRPKIITIVE 436 (576)
Q Consensus 377 ~~~~ledl~~~~L~lr~~~~EaLaVN~~~-~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlvE 436 (576)
.+.++. .. + ..=+|-|.+ .+|++... .....+|+.+ +-|+|.-+++++
T Consensus 87 ---d~~~~~-----~~-~--~fD~v~~~~~~~~~~~~~-~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 87 ---DMRELE-----LP-E--PVDAITILCDSLNYLQTE-ADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp ---CGGGCC-----CS-S--CEEEEEECTTGGGGCCSH-HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---ChhhcC-----CC-C--CcCEEEEeCCchhhcCCH-HHHHHHHHHHHHhcCCCeEEEEE
Confidence 222221 11 1 222222333 57777432 2345566655 668998877764
No 80
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=59.05 E-value=28 Score=30.44 Aligned_cols=103 Identities=15% Similarity=0.146 Sum_probs=57.4
Q ss_pred HHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCc-eeEEe
Q 008153 296 AILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGV-EFEFR 374 (576)
Q Consensus 296 AILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgV-pFeF~ 374 (576)
.|++.+.-.+.-+|+|+|.|.|. +...|+. +..++|||+. +...++...+++ +..|+ ..+|.
T Consensus 26 ~~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~-----~~~~v~~vD~----~~~~~~~a~~~~----~~~~~~~~~~~ 88 (183)
T 2yxd_A 26 VSIGKLNLNKDDVVVDVGCGSGG----MTVEIAK-----RCKFVYAIDY----LDGAIEVTKQNL----AKFNIKNCQII 88 (183)
T ss_dssp HHHHHHCCCTTCEEEEESCCCSH----HHHHHHT-----TSSEEEEEEC----SHHHHHHHHHHH----HHTTCCSEEEE
T ss_pred HHHHHcCCCCCCEEEEeCCCCCH----HHHHHHh-----cCCeEEEEeC----CHHHHHHHHHHH----HHcCCCcEEEE
Confidence 35555554555689999999987 4445554 4468999984 345555444443 33444 24443
Q ss_pred eeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHHHhcCCcEEEEE
Q 008153 375 GFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSIKAMRPKIITIV 435 (576)
Q Consensus 375 ~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~Ir~L~PkIvtlv 435 (576)
. ..+.+ .+. .+.-..++.+.. ...+.+|+.++++ |.-.+++
T Consensus 89 ~---~d~~~----~~~--~~~~D~i~~~~~----------~~~~~~l~~~~~~-~gG~l~~ 129 (183)
T 2yxd_A 89 K---GRAED----VLD--KLEFNKAFIGGT----------KNIEKIIEILDKK-KINHIVA 129 (183)
T ss_dssp E---SCHHH----HGG--GCCCSEEEECSC----------SCHHHHHHHHHHT-TCCEEEE
T ss_pred E---CCccc----ccc--CCCCcEEEECCc----------ccHHHHHHHHhhC-CCCEEEE
Confidence 2 12221 111 011135555543 2467899999888 8655544
No 81
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=58.68 E-value=54 Score=29.42 Aligned_cols=108 Identities=19% Similarity=0.172 Sum_probs=53.2
Q ss_pred eEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCc--eeEEeeeecCCCCCC
Q 008153 307 VHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGV--EFEFRGFVCNSLADL 384 (576)
Q Consensus 307 VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgV--pFeF~~v~~~~ledl 384 (576)
-.|+|+|.|.|. +...|+.+-+ |.-++|||+. +...++.+.+++ +..|+ .++|.. ...+++
T Consensus 24 ~~vLDlGcG~G~----~~~~l~~~~~--~~~~v~~vD~----s~~~~~~a~~~~----~~~~~~~~v~~~~---~d~~~~ 86 (197)
T 3eey_A 24 DTVVDATCGNGN----DTAFLASLVG--ENGRVFGFDI----QDKAIANTTKKL----TDLNLIDRVTLIK---DGHQNM 86 (197)
T ss_dssp CEEEESCCTTSH----HHHHHHHHHC--TTCEEEEECS----CHHHHHHHHHHH----HHTTCGGGEEEEC---SCGGGG
T ss_pred CEEEEcCCCCCH----HHHHHHHHhC--CCCEEEEEEC----CHHHHHHHHHHH----HHcCCCCCeEEEE---CCHHHH
Confidence 479999999984 3333444311 2238999994 445565554444 33444 345542 223332
Q ss_pred CccccccCCCCCceEEEEehhh---hhhccCCCChHHHHHHH-HHhcCCcEEEEE
Q 008153 385 EPDMLDIRPPEVETVAVNSVFE---LHRLLARPGGIEKVVSS-IKAMRPKIITIV 435 (576)
Q Consensus 385 ~~~~L~lr~~~~EaLaVN~~~~---Lh~L~~~~~~~d~vL~~-Ir~L~PkIvtlv 435 (576)
.. ..++.-..++.|..+. -|.....+.....+|+. .+-|+|.-.+++
T Consensus 87 ~~----~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~ 137 (197)
T 3eey_A 87 DK----YIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITV 137 (197)
T ss_dssp GG----TCCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred hh----hccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEE
Confidence 21 1111224666675441 01121111123345554 466899766554
No 82
>2qn6_B Translation initiation factor 2 alpha subunit; initiation of translation, GTP-binding, nucleotide-binding, protein biosynthesis; HET: GDP; 2.15A {Sulfolobus solfataricus} SCOP: d.58.51.1 PDB: 2qmu_B* 3qsy_B*
Probab=58.57 E-value=5.5 Score=33.98 Aligned_cols=42 Identities=21% Similarity=0.432 Sum_probs=31.7
Q ss_pred CCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEe
Q 008153 333 GPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFR 374 (576)
Q Consensus 333 GPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~ 374 (576)
|||..|||...+.-......|+++-..+.+..+..|..|+|+
T Consensus 50 gaP~Y~i~~~~~D~k~ge~~L~~ai~~i~~~i~~~gG~~~v~ 91 (93)
T 2qn6_B 50 GAPRYRVDVVGTNPKEASEALNQIISNLIKIGKEENVDISVV 91 (93)
T ss_dssp STTEEEEEEEESCHHHHHHHHHHHHHHHHHHHHHTTEEEEEC
T ss_pred cCCeEEEEEEecCHHHHHHHHHHHHHHHHHHHHHhCCEEEEE
Confidence 577777766664322234678999999999999999999986
No 83
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=58.37 E-value=36 Score=32.91 Aligned_cols=100 Identities=10% Similarity=0.041 Sum_probs=57.3
Q ss_pred eEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEeeeecCCCCCCCc
Q 008153 307 VHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRGFVCNSLADLEP 386 (576)
Q Consensus 307 VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~~v~~~~ledl~~ 386 (576)
=+|+|+|.|.| .|--.++.+ .|..++++++. +...++-+.++ |+..|+...++. + |+..
T Consensus 51 ~~VLDlGCG~G----plAl~l~~~---~p~a~~~A~Di----~~~~leiar~~----~~~~g~~~~v~~--~----d~~~ 109 (200)
T 3fzg_A 51 SSILDFGCGFN----PLALYQWNE---NEKIIYHAYDI----DRAEIAFLSSI----IGKLKTTIKYRF--L----NKES 109 (200)
T ss_dssp SEEEEETCTTH----HHHHHHHCS---SCCCEEEEECS----CHHHHHHHHHH----HHHSCCSSEEEE--E----CCHH
T ss_pred CeEEEecCCCC----HHHHHHHhc---CCCCEEEEEeC----CHHHHHHHHHH----HHhcCCCccEEE--e----cccc
Confidence 37899988755 455555543 45569999984 45556544444 456687754442 1 1111
Q ss_pred cccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHHHhcCCcEEEEE
Q 008153 387 DMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSIKAMRPKIITIV 435 (576)
Q Consensus 387 ~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~Ir~L~PkIvtlv 435 (576)
. .-++ ..=+|=...-||+|-++.+. ..+.++.|+|..++|.
T Consensus 110 ~---~~~~--~~DvVLa~k~LHlL~~~~~a---l~~v~~~L~pggvfIS 150 (200)
T 3fzg_A 110 D---VYKG--TYDVVFLLKMLPVLKQQDVN---ILDFLQLFHTQNFVIS 150 (200)
T ss_dssp H---HTTS--EEEEEEEETCHHHHHHTTCC---HHHHHHTCEEEEEEEE
T ss_pred c---CCCC--CcChhhHhhHHHhhhhhHHH---HHHHHHHhCCCCEEEE
Confidence 1 1111 22233333457888434443 4477789999988885
No 84
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=58.11 E-value=23 Score=33.58 Aligned_cols=98 Identities=16% Similarity=0.243 Sum_probs=56.1
Q ss_pred eeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEeeeecCCCCCCC
Q 008153 306 RVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRGFVCNSLADLE 385 (576)
Q Consensus 306 ~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~~v~~~~ledl~ 385 (576)
.-.|+|+|.|.|. +...|+.+ + .++|||+. +...++...+++. +| +|.. ..+.++.
T Consensus 51 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~----s~~~~~~a~~~~~------~~--~~~~---~d~~~~~ 106 (263)
T 3pfg_A 51 AASLLDVACGTGM----HLRHLADS--F---GTVEGLEL----SADMLAIARRRNP------DA--VLHH---GDMRDFS 106 (263)
T ss_dssp CCEEEEETCTTSH----HHHHHTTT--S---SEEEEEES----CHHHHHHHHHHCT------TS--EEEE---CCTTTCC
T ss_pred CCcEEEeCCcCCH----HHHHHHHc--C---CeEEEEEC----CHHHHHHHHhhCC------CC--EEEE---CChHHCC
Confidence 3579999999985 56667665 3 27999984 2344443333321 33 3332 2333322
Q ss_pred ccccccCCCCCceEEEEehh-hhhhccCCCChHHHHHHHH-HhcCCcEEEEEe
Q 008153 386 PDMLDIRPPEVETVAVNSVF-ELHRLLARPGGIEKVVSSI-KAMRPKIITIVE 436 (576)
Q Consensus 386 ~~~L~lr~~~~EaLaVN~~~-~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlvE 436 (576)
. ++ ..=+|-|.+ .||++... .....+|+.+ +-|+|.-+++++
T Consensus 107 ~------~~--~fD~v~~~~~~l~~~~~~-~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 107 L------GR--RFSAVTCMFSSIGHLAGQ-AELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp C------SC--CEEEEEECTTGGGGSCHH-HHHHHHHHHHHHTEEEEEEEEEC
T ss_pred c------cC--CcCEEEEcCchhhhcCCH-HHHHHHHHHHHHhcCCCcEEEEE
Confidence 1 11 333444555 68887531 2355666655 668999888885
No 85
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=58.00 E-value=93 Score=28.63 Aligned_cols=103 Identities=17% Similarity=0.193 Sum_probs=57.8
Q ss_pred HHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCce--eEE
Q 008153 296 AILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVE--FEF 373 (576)
Q Consensus 296 AILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVp--FeF 373 (576)
.+++.+.-...-.|+|+|.|.|. +...||.+ + .++|||+. +...++...++ ++..|++ ++|
T Consensus 46 ~~l~~l~~~~~~~vLDlGcG~G~----~~~~la~~-~----~~v~~vD~----s~~~~~~a~~~----~~~~g~~~~v~~ 108 (204)
T 3njr_A 46 LTLAALAPRRGELLWDIGGGSGS----VSVEWCLA-G----GRAITIEP----RADRIENIQKN----IDTYGLSPRMRA 108 (204)
T ss_dssp HHHHHHCCCTTCEEEEETCTTCH----HHHHHHHT-T----CEEEEEES----CHHHHHHHHHH----HHHTTCTTTEEE
T ss_pred HHHHhcCCCCCCEEEEecCCCCH----HHHHHHHc-C----CEEEEEeC----CHHHHHHHHHH----HHHcCCCCCEEE
Confidence 45666655555679999999885 44556665 3 58999984 34555544433 4455665 555
Q ss_pred eeeecCCCCC-CCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEE
Q 008153 374 RGFVCNSLAD-LEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIV 435 (576)
Q Consensus 374 ~~v~~~~led-l~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlv 435 (576)
.. ....+ +. .... -.+++++..+ ..+ +|+.+ +.|+|.-.+++
T Consensus 109 ~~---~d~~~~~~----~~~~--~D~v~~~~~~----------~~~-~l~~~~~~LkpgG~lv~ 152 (204)
T 3njr_A 109 VQ---GTAPAALA----DLPL--PEAVFIGGGG----------SQA-LYDRLWEWLAPGTRIVA 152 (204)
T ss_dssp EE---SCTTGGGT----TSCC--CSEEEECSCC----------CHH-HHHHHHHHSCTTCEEEE
T ss_pred Ee---Cchhhhcc----cCCC--CCEEEECCcc----------cHH-HHHHHHHhcCCCcEEEE
Confidence 42 22222 11 1111 1466655422 234 66655 56899766655
No 86
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=57.82 E-value=12 Score=36.97 Aligned_cols=56 Identities=16% Similarity=0.290 Sum_probs=32.7
Q ss_pred HHHHhhccC--CeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHH
Q 008153 296 AILEAFNNA--NRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQ 362 (576)
Q Consensus 296 AILEA~~g~--~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~ 362 (576)
.+++.+... +.-.|+|+|.+.|. +...|+.+-+ ..+||||+. +...++...+++..
T Consensus 35 ~~l~~l~~~~~~~~~VLDiGCG~G~----~~~~la~~~~---~~~v~gvDi----s~~~i~~A~~~~~~ 92 (292)
T 3g07_A 35 GRLRVLKPEWFRGRDVLDLGCNVGH----LTLSIACKWG---PSRMVGLDI----DSRLIHSARQNIRH 92 (292)
T ss_dssp GGGGTSCGGGTTTSEEEEESCTTCH----HHHHHHHHTC---CSEEEEEES----CHHHHHHHHHTC--
T ss_pred HHHHhhhhhhcCCCcEEEeCCCCCH----HHHHHHHHcC---CCEEEEECC----CHHHHHHHHHHHHh
Confidence 344444433 44579999999984 4445555432 249999994 34556555555443
No 87
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=56.71 E-value=53 Score=30.67 Aligned_cols=110 Identities=15% Similarity=0.163 Sum_probs=60.9
Q ss_pred HHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCce--eE
Q 008153 295 QAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVE--FE 372 (576)
Q Consensus 295 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVp--Fe 372 (576)
..|++.+.-...-+|+|+|.|.|. +...|+.+.+ .++|||+. +...++...++ ++..|++ .+
T Consensus 26 ~~l~~~~~~~~~~~VLDiGcG~G~----~~~~la~~~~----~~v~gvD~----s~~~l~~a~~~----~~~~~~~~~v~ 89 (256)
T 1nkv_A 26 ATLGRVLRMKPGTRILDLGSGSGE----MLCTWARDHG----ITGTGIDM----SSLFTAQAKRR----AEELGVSERVH 89 (256)
T ss_dssp HHHHHHTCCCTTCEEEEETCTTCH----HHHHHHHHTC----CEEEEEES----CHHHHHHHHHH----HHHTTCTTTEE
T ss_pred HHHHHhcCCCCCCEEEEECCCCCH----HHHHHHHhcC----CeEEEEeC----CHHHHHHHHHH----HHhcCCCcceE
Confidence 445556554455689999999987 3334444332 37899984 34455544433 3444553 55
Q ss_pred EeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEE
Q 008153 373 FRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIV 435 (576)
Q Consensus 373 F~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlv 435 (576)
|.. ..++++.. . +..=+|-|...+|++.+ ...+|+.+ |-|+|.-.+++
T Consensus 90 ~~~---~d~~~~~~------~--~~fD~V~~~~~~~~~~~----~~~~l~~~~r~LkpgG~l~~ 138 (256)
T 1nkv_A 90 FIH---NDAAGYVA------N--EKCDVAACVGATWIAGG----FAGAEELLAQSLKPGGIMLI 138 (256)
T ss_dssp EEE---SCCTTCCC------S--SCEEEEEEESCGGGTSS----SHHHHHHHTTSEEEEEEEEE
T ss_pred EEE---CChHhCCc------C--CCCCEEEECCChHhcCC----HHHHHHHHHHHcCCCeEEEE
Confidence 553 23333321 1 12334444556777643 35566655 66799866554
No 88
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=56.59 E-value=26 Score=32.19 Aligned_cols=117 Identities=15% Similarity=0.139 Sum_probs=61.3
Q ss_pred HHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCc-eeEEe
Q 008153 296 AILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGV-EFEFR 374 (576)
Q Consensus 296 AILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgV-pFeF~ 374 (576)
..++.+.....-+|+|+|.|.|. +...|+.+ -|..++|||+.. ...++.+.++..+-++..++ ..+|.
T Consensus 18 ~~~~~l~~~~~~~vLDiGcG~G~----~~~~la~~---~p~~~v~gvD~s----~~~l~~~~~~a~~~~~~~~~~~v~~~ 86 (218)
T 3mq2_A 18 AEFEQLRSQYDDVVLDVGTGDGK----HPYKVARQ---NPSRLVVALDAD----KSRMEKISAKAAAKPAKGGLPNLLYL 86 (218)
T ss_dssp HHHHHHHTTSSEEEEEESCTTCH----HHHHHHHH---CTTEEEEEEESC----GGGGHHHHHHHTSCGGGTCCTTEEEE
T ss_pred HHHHHhhccCCCEEEEecCCCCH----HHHHHHHH---CCCCEEEEEECC----HHHHHHHHHHHHHhhhhcCCCceEEE
Confidence 34555555667789999999986 33444443 245799999953 34454444443333344454 34554
Q ss_pred eeecCCCCCCCccccccCCCCCceEEEEe-hhhh--hhccCCCChHHHHHHHH-HhcCCcEEEEEe
Q 008153 375 GFVCNSLADLEPDMLDIRPPEVETVAVNS-VFEL--HRLLARPGGIEKVVSSI-KAMRPKIITIVE 436 (576)
Q Consensus 375 ~v~~~~ledl~~~~L~lr~~~~EaLaVN~-~~~L--h~L~~~~~~~d~vL~~I-r~L~PkIvtlvE 436 (576)
. ...+++.. ..+. +.+.+.. ...+ |++.+. ..+|+.+ |-|+|.-.+++.
T Consensus 87 ~---~d~~~l~~-----~~~~-d~v~~~~~~~~~~~~~~~~~----~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 87 W---ATAERLPP-----LSGV-GELHVLMPWGSLLRGVLGSS----PEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp E---CCSTTCCS-----CCCE-EEEEEESCCHHHHHHHHTSS----SHHHHHHHHTEEEEEEEEEE
T ss_pred e---cchhhCCC-----CCCC-CEEEEEccchhhhhhhhccH----HHHHHHHHHHcCCCcEEEEE
Confidence 2 23333321 1111 2232222 2223 354332 3455544 678999887763
No 89
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=56.39 E-value=13 Score=37.62 Aligned_cols=117 Identities=18% Similarity=0.198 Sum_probs=63.8
Q ss_pred HHHHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeE
Q 008153 293 ANQAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFE 372 (576)
Q Consensus 293 ANqAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFe 372 (576)
..+.|++.+.....-+|+|+|-|.|. +...|+.+ + |..++|+|+. +...++...+++ +..++..+
T Consensus 184 ~~~~ll~~l~~~~~~~VLDlGcG~G~----~~~~la~~--~-~~~~v~~vD~----s~~~l~~a~~~~----~~~~~~~~ 248 (343)
T 2pjd_A 184 GSQLLLSTLTPHTKGKVLDVGCGAGV----LSVAFARH--S-PKIRLTLCDV----SAPAVEASRATL----AANGVEGE 248 (343)
T ss_dssp HHHHHHHHSCTTCCSBCCBTTCTTSH----HHHHHHHH--C-TTCBCEEEES----BHHHHHHHHHHH----HHTTCCCE
T ss_pred HHHHHHHhcCcCCCCeEEEecCccCH----HHHHHHHH--C-CCCEEEEEEC----CHHHHHHHHHHH----HHhCCCCE
Confidence 35677787743333479999999887 33344433 2 4568999984 345565554444 33466555
Q ss_pred EeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccC-CCChHHHHHHHH-HhcCCcEEEEEe
Q 008153 373 FRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLA-RPGGIEKVVSSI-KAMRPKIITIVE 436 (576)
Q Consensus 373 F~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~-~~~~~d~vL~~I-r~L~PkIvtlvE 436 (576)
|.. . ...+.. .+.-..++.|..| |+-.. .......+|+.+ +-|+|.-.+++.
T Consensus 249 ~~~--~-d~~~~~-------~~~fD~Iv~~~~~--~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 302 (343)
T 2pjd_A 249 VFA--S-NVFSEV-------KGRFDMIISNPPF--HDGMQTSLDAAQTLIRGAVRHLNSGGELRIV 302 (343)
T ss_dssp EEE--C-STTTTC-------CSCEEEEEECCCC--CSSSHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEE--c-cccccc-------cCCeeEEEECCCc--ccCccCCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 532 2 221111 1112466666554 43111 012345667665 668998777653
No 90
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=55.07 E-value=78 Score=32.10 Aligned_cols=132 Identities=14% Similarity=0.089 Sum_probs=73.1
Q ss_pred HHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEee
Q 008153 296 AILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRG 375 (576)
Q Consensus 296 AILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~~ 375 (576)
+|++.+.. --.|+|+|.|.|. |--.++. .+|..++++++. +...++-+. +++...|+++.|..
T Consensus 125 ~i~~~i~~--p~~VLDLGCG~Gp----LAl~~~~---~~p~a~y~a~DI----d~~~le~a~----~~l~~~g~~~~~~v 187 (281)
T 3lcv_B 125 ELFRHLPR--PNTLRDLACGLNP----LAAPWMG---LPAETVYIASDI----DARLVGFVD----EALTRLNVPHRTNV 187 (281)
T ss_dssp HHGGGSCC--CSEEEETTCTTGG----GCCTTTT---CCTTCEEEEEES----BHHHHHHHH----HHHHHTTCCEEEEE
T ss_pred HHHhccCC--CceeeeeccCccH----HHHHHHh---hCCCCEEEEEeC----CHHHHHHHH----HHHHhcCCCceEEE
Confidence 45555533 3478999988774 2222222 247789999983 455555444 44566799988863
Q ss_pred eecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHHHhcCCcEEEEE-ecC-CCCCCchhHHHHHHH
Q 008153 376 FVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSIKAMRPKIITIV-EQE-ANHNSPVFLDRFTEA 453 (576)
Q Consensus 376 v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~Ir~L~PkIvtlv-Eqe-anhNsp~F~~RF~EA 453 (576)
. |+....+. +...++.+| ..+|+|-+. .....++.+..|+|..|+|. ++- .+--++.|.
T Consensus 188 ~------D~~~~~p~---~~~DvaL~l--kti~~Le~q--~kg~g~~ll~aL~~~~vvVSfp~ksl~Grs~gm~------ 248 (281)
T 3lcv_B 188 A------DLLEDRLD---EPADVTLLL--KTLPCLETQ--QRGSGWEVIDIVNSPNIVVTFPTKSLGQRSKGMF------ 248 (281)
T ss_dssp C------CTTTSCCC---SCCSEEEET--TCHHHHHHH--STTHHHHHHHHSSCSEEEEEEECC-------CHH------
T ss_pred e------eecccCCC---CCcchHHHH--HHHHHhhhh--hhHHHHHHHHHhCCCCEEEeccchhhcCCCcchh------
Confidence 2 22222221 122355555 457887542 12244589999999999885 331 122233332
Q ss_pred HHHHHHHhhhh
Q 008153 454 LHYYSSLFDSL 464 (576)
Q Consensus 454 L~yYsalFDSL 464 (576)
..|+..|+..
T Consensus 249 -~~Y~~~~e~~ 258 (281)
T 3lcv_B 249 -QNYSQSFESQ 258 (281)
T ss_dssp -HHHHHHHHHH
T ss_pred -hHHHHHHHHH
Confidence 3577777764
No 91
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=54.65 E-value=25 Score=35.78 Aligned_cols=114 Identities=13% Similarity=0.131 Sum_probs=62.7
Q ss_pred HHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCce--eE
Q 008153 295 QAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVE--FE 372 (576)
Q Consensus 295 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVp--Fe 372 (576)
++|++...-.+.-.|+|+|-|.|. +...|+.+ +.-+++||+.. ..++.+. +.++..|++ .+
T Consensus 56 ~~i~~~~~~~~~~~VLDvGcG~G~----~~~~la~~----g~~~v~gvD~s-----~~l~~a~----~~~~~~~~~~~v~ 118 (349)
T 3q7e_A 56 NSMFHNRHLFKDKVVLDVGSGTGI----LCMFAAKA----GARKVIGIECS-----SISDYAV----KIVKANKLDHVVT 118 (349)
T ss_dssp HHHHTCHHHHTTCEEEEESCTTSH----HHHHHHHT----TCSEEEEEECS-----THHHHHH----HHHHHTTCTTTEE
T ss_pred HHHHhccccCCCCEEEEEeccchH----HHHHHHHC----CCCEEEEECcH-----HHHHHHH----HHHHHcCCCCcEE
Confidence 345543322233479999999995 45556665 23589999953 2343332 334445554 45
Q ss_pred EeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEEe
Q 008153 373 FRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIVE 436 (576)
Q Consensus 373 F~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlvE 436 (576)
|.. .+++++. + ..+.-..++.+++ .+.+.. ....+.+|..+ |-|+|.-+++.+
T Consensus 119 ~~~---~d~~~~~---~--~~~~fD~Iis~~~--~~~l~~-~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 119 IIK---GKVEEVE---L--PVEKVDIIISEWM--GYCLFY-ESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp EEE---SCTTTCC---C--SSSCEEEEEECCC--BBTBTB-TCCHHHHHHHHHHHEEEEEEEESC
T ss_pred EEE---CcHHHcc---C--CCCceEEEEEccc--cccccC-chhHHHHHHHHHHhCCCCCEEccc
Confidence 543 3444442 1 1111135555443 222322 34577888887 779999887743
No 92
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=54.30 E-value=25 Score=32.69 Aligned_cols=110 Identities=15% Similarity=0.171 Sum_probs=54.7
Q ss_pred eeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCce--eEEeeeec-CCCC
Q 008153 306 RVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVE--FEFRGFVC-NSLA 382 (576)
Q Consensus 306 ~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVp--FeF~~v~~-~~le 382 (576)
.-+|+|+|.+.|.- ...||.+- ++.-++|+|+. +...++.+.+++ +..|+. ++|..--+ ..+.
T Consensus 59 ~~~vLdiG~G~G~~----~~~la~~~--~~~~~v~~vD~----~~~~~~~a~~~~----~~~~~~~~v~~~~~d~~~~l~ 124 (221)
T 3u81_A 59 PSLVLELGAYCGYS----AVRMARLL--QPGARLLTMEI----NPDCAAITQQML----NFAGLQDKVTILNGASQDLIP 124 (221)
T ss_dssp CSEEEEECCTTSHH----HHHHHTTS--CTTCEEEEEES----CHHHHHHHHHHH----HHHTCGGGEEEEESCHHHHGG
T ss_pred CCEEEEECCCCCHH----HHHHHHhC--CCCCEEEEEeC----ChHHHHHHHHHH----HHcCCCCceEEEECCHHHHHH
Confidence 34799999998863 23344321 23469999984 345555444443 334543 44442111 0011
Q ss_pred CCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHHHhcCCcEEEEEecC
Q 008153 383 DLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSIKAMRPKIITIVEQE 438 (576)
Q Consensus 383 dl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~Ir~L~PkIvtlvEqe 438 (576)
.+... ... +.-..++++... |+.. ....++..++-|+|.-+++++.-
T Consensus 125 ~~~~~-~~~--~~fD~V~~d~~~--~~~~----~~~~~~~~~~~LkpgG~lv~~~~ 171 (221)
T 3u81_A 125 QLKKK-YDV--DTLDMVFLDHWK--DRYL----PDTLLLEKCGLLRKGTVLLADNV 171 (221)
T ss_dssp GTTTT-SCC--CCCSEEEECSCG--GGHH----HHHHHHHHTTCCCTTCEEEESCC
T ss_pred HHHHh-cCC--CceEEEEEcCCc--ccch----HHHHHHHhccccCCCeEEEEeCC
Confidence 11100 000 111466665432 2221 12345555589999998888533
No 93
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=53.93 E-value=41 Score=30.43 Aligned_cols=44 Identities=34% Similarity=0.475 Sum_probs=33.4
Q ss_pred HHHHHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCC
Q 008153 292 TANQAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGP 344 (576)
Q Consensus 292 tANqAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~ 344 (576)
...+.|++.+.....-+|+|+|.|.|. +...|+.+ + .++|||+.
T Consensus 39 ~~~~~~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~vD~ 82 (227)
T 3e8s_A 39 VTDQAILLAILGRQPERVLDLGCGEGW----LLRALADR-G----IEAVGVDG 82 (227)
T ss_dssp THHHHHHHHHHHTCCSEEEEETCTTCH----HHHHHHTT-T----CEEEEEES
T ss_pred cccHHHHHHhhcCCCCEEEEeCCCCCH----HHHHHHHC-C----CEEEEEcC
Confidence 355678888876666899999999984 55667766 2 38999984
No 94
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=53.64 E-value=39 Score=31.07 Aligned_cols=102 Identities=17% Similarity=0.118 Sum_probs=55.0
Q ss_pred eEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCc-eeEEeeeecCCCCCCC
Q 008153 307 VHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGV-EFEFRGFVCNSLADLE 385 (576)
Q Consensus 307 VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgV-pFeF~~v~~~~ledl~ 385 (576)
-+|+|+|-|.|.--. .++.+ + . -++|||+. +...++.+.+++ +..|+ ..+|.. ....++.
T Consensus 56 ~~vLDlgcG~G~~~~----~l~~~-~-~--~~V~~vD~----s~~~l~~a~~~~----~~~~~~~v~~~~---~D~~~~~ 116 (202)
T 2fpo_A 56 AQCLDCFAGSGALGL----EALSR-Y-A--AGATLIEM----DRAVSQQLIKNL----ATLKAGNARVVN---SNAMSFL 116 (202)
T ss_dssp CEEEETTCTTCHHHH----HHHHT-T-C--SEEEEECS----CHHHHHHHHHHH----HHTTCCSEEEEC---SCHHHHH
T ss_pred CeEEEeCCCcCHHHH----HHHhc-C-C--CEEEEEEC----CHHHHHHHHHHH----HHcCCCcEEEEE---CCHHHHH
Confidence 479999999886332 22333 2 1 28999993 455665554444 33454 344432 1221111
Q ss_pred ccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHHHh---cCCcEEEEEecC
Q 008153 386 PDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSIKA---MRPKIITIVEQE 438 (576)
Q Consensus 386 ~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~Ir~---L~PkIvtlvEqe 438 (576)
+ ...+.-..+++|..|. .+..+.+|+.+++ |+|.-+++++..
T Consensus 117 ~----~~~~~fD~V~~~~p~~-------~~~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 117 A----QKGTPHNIVFVDPPFR-------RGLLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp S----SCCCCEEEEEECCSSS-------TTTHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred h----hcCCCCCEEEECCCCC-------CCcHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 1 0111114666665532 1345678888876 999987777644
No 95
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=53.58 E-value=26 Score=32.01 Aligned_cols=38 Identities=11% Similarity=0.090 Sum_probs=24.6
Q ss_pred HHHHhhcc-CCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCC
Q 008153 296 AILEAFNN-ANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPP 345 (576)
Q Consensus 296 AILEA~~g-~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p 345 (576)
.|++.+.. ...-+|+|+|.|.|.- ...|+ .++|||+..
T Consensus 57 ~~~~~l~~~~~~~~vLDiG~G~G~~----~~~l~--------~~v~~~D~s 95 (215)
T 2zfu_A 57 RIARDLRQRPASLVVADFGCGDCRL----ASSIR--------NPVHCFDLA 95 (215)
T ss_dssp HHHHHHHTSCTTSCEEEETCTTCHH----HHHCC--------SCEEEEESS
T ss_pred HHHHHHhccCCCCeEEEECCcCCHH----HHHhh--------ccEEEEeCC
Confidence 35555542 3446899999998862 23332 589999854
No 96
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=52.48 E-value=46 Score=33.23 Aligned_cols=98 Identities=12% Similarity=0.070 Sum_probs=58.2
Q ss_pred eeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEeeeecCCCCCCC
Q 008153 306 RVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRGFVCNSLADLE 385 (576)
Q Consensus 306 ~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~~v~~~~ledl~ 385 (576)
--.|+|+|-|.|. |--++ + |..+++|++- +...++ .+.+++...|+++.|... |+.
T Consensus 106 p~~VLDlGCG~gp----Lal~~--~----~~~~y~a~DI----d~~~i~----~ar~~~~~~g~~~~~~v~------D~~ 161 (253)
T 3frh_A 106 PRRVLDIACGLNP----LALYE--R----GIASVWGCDI----HQGLGD----VITPFAREKDWDFTFALQ------DVL 161 (253)
T ss_dssp CSEEEEETCTTTH----HHHHH--T----TCSEEEEEES----BHHHHH----HHHHHHHHTTCEEEEEEC------CTT
T ss_pred CCeEEEecCCccH----HHHHh--c----cCCeEEEEeC----CHHHHH----HHHHHHHhcCCCceEEEe------ecc
Confidence 4489999998773 22222 2 6689999984 334443 444556677999988842 222
Q ss_pred ccccccCCCCCceEEEEehhhhhhccC-CCChHHHHHHHHHhcCCcEEEEE
Q 008153 386 PDMLDIRPPEVETVAVNSVFELHRLLA-RPGGIEKVVSSIKAMRPKIITIV 435 (576)
Q Consensus 386 ~~~L~lr~~~~EaLaVN~~~~Lh~L~~-~~~~~d~vL~~Ir~L~PkIvtlv 435 (576)
...+ ++...++.++- .+|+|-+ +.+ ..++.+..|+|..|++.
T Consensus 162 ~~~~---~~~~DvvLllk--~lh~LE~q~~~---~~~~ll~aL~~~~vvVs 204 (253)
T 3frh_A 162 CAPP---AEAGDLALIFK--LLPLLEREQAG---SAMALLQSLNTPRMAVS 204 (253)
T ss_dssp TSCC---CCBCSEEEEES--CHHHHHHHSTT---HHHHHHHHCBCSEEEEE
T ss_pred cCCC---CCCcchHHHHH--HHHHhhhhchh---hHHHHHHHhcCCCEEEE
Confidence 2212 11124555553 4677743 223 44477779999988884
No 97
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=52.21 E-value=52 Score=28.86 Aligned_cols=108 Identities=13% Similarity=0.170 Sum_probs=54.1
Q ss_pred HHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEee
Q 008153 296 AILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRG 375 (576)
Q Consensus 296 AILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~~ 375 (576)
.+++.+-. +.-+|+|+|-|.|. +...|+.+ + .++|||+. +...++...+++. + .+|..
T Consensus 38 ~~l~~~~~-~~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~~D~----~~~~~~~a~~~~~------~--~~~~~ 95 (195)
T 3cgg_A 38 RLIDAMAP-RGAKILDAGCGQGR----IGGYLSKQ-G----HDVLGTDL----DPILIDYAKQDFP------E--ARWVV 95 (195)
T ss_dssp HHHHHHSC-TTCEEEEETCTTTH----HHHHHHHT-T----CEEEEEES----CHHHHHHHHHHCT------T--SEEEE
T ss_pred HHHHHhcc-CCCeEEEECCCCCH----HHHHHHHC-C----CcEEEEcC----CHHHHHHHHHhCC------C--CcEEE
Confidence 45555532 44589999999886 44455555 2 38999984 3344443333321 2 33332
Q ss_pred eecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEEe
Q 008153 376 FVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIVE 436 (576)
Q Consensus 376 v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlvE 436 (576)
..+.++. +..+.-..++.+ ...+|++.. .....+|+.+ +.|+|.-++++.
T Consensus 96 ---~d~~~~~-----~~~~~~D~i~~~-~~~~~~~~~--~~~~~~l~~~~~~l~~~G~l~~~ 146 (195)
T 3cgg_A 96 ---GDLSVDQ-----ISETDFDLIVSA-GNVMGFLAE--DGREPALANIHRALGADGRAVIG 146 (195)
T ss_dssp ---CCTTTSC-----CCCCCEEEEEEC-CCCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---cccccCC-----CCCCceeEEEEC-CcHHhhcCh--HHHHHHHHHHHHHhCCCCEEEEE
Confidence 2233321 111111334433 123455421 2345566554 668998777663
No 98
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=51.95 E-value=19 Score=35.72 Aligned_cols=52 Identities=12% Similarity=-0.014 Sum_probs=34.0
Q ss_pred HHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHH
Q 008153 295 QAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWK 359 (576)
Q Consensus 295 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~r 359 (576)
..|++.+.-...-+|+|+|-|.|. +-..||.+ + -++|||+. +...++...++
T Consensus 35 ~~il~~l~l~~g~~VLDlGcGtG~----~a~~La~~-g----~~V~gvD~----S~~ml~~Ar~~ 86 (261)
T 3iv6_A 35 ENDIFLENIVPGSTVAVIGASTRF----LIEKALER-G----ASVTVFDF----SQRMCDDLAEA 86 (261)
T ss_dssp HHHHHTTTCCTTCEEEEECTTCHH----HHHHHHHT-T----CEEEEEES----CHHHHHHHHHH
T ss_pred HHHHHhcCCCCcCEEEEEeCcchH----HHHHHHhc-C----CEEEEEEC----CHHHHHHHHHH
Confidence 346666665556689999999886 45556665 3 37999984 34555544443
No 99
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=51.49 E-value=1.2e+02 Score=31.67 Aligned_cols=110 Identities=18% Similarity=0.205 Sum_probs=61.4
Q ss_pred HHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCc-eeEEee
Q 008153 297 ILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGV-EFEFRG 375 (576)
Q Consensus 297 ILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgV-pFeF~~ 375 (576)
+++.+.....-.|+|+|-|.|. +...||.+ .-+++||+. +...++...+++ +..|+ ..+|..
T Consensus 278 ~~~~l~~~~~~~VLDlgcG~G~----~~~~la~~-----~~~V~gvD~----s~~al~~A~~n~----~~~~~~~v~f~~ 340 (433)
T 1uwv_A 278 ALEWLDVQPEDRVLDLFCGMGN----FTLPLATQ-----AASVVGVEG----VPALVEKGQQNA----RLNGLQNVTFYH 340 (433)
T ss_dssp HHHHHTCCTTCEEEEESCTTTT----THHHHHTT-----SSEEEEEES----CHHHHHHHHHHH----HHTTCCSEEEEE
T ss_pred HHHhhcCCCCCEEEECCCCCCH----HHHHHHhh-----CCEEEEEeC----CHHHHHHHHHHH----HHcCCCceEEEE
Confidence 3444443334479999999987 33445655 248999983 455665554443 34455 355543
Q ss_pred eecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHHHhcCCcEEEEEe
Q 008153 376 FVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSIKAMRPKIITIVE 436 (576)
Q Consensus 376 v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~Ir~L~PkIvtlvE 436 (576)
.++++.-.. +....+.-.++++|-. +.+ .+.+++.|..++|+-++.+.
T Consensus 341 ---~d~~~~l~~-~~~~~~~fD~Vv~dPP--------r~g-~~~~~~~l~~~~p~~ivyvs 388 (433)
T 1uwv_A 341 ---ENLEEDVTK-QPWAKNGFDKVLLDPA--------RAG-AAGVMQQIIKLEPIRIVYVS 388 (433)
T ss_dssp ---CCTTSCCSS-SGGGTTCCSEEEECCC--------TTC-CHHHHHHHHHHCCSEEEEEE
T ss_pred ---CCHHHHhhh-hhhhcCCCCEEEECCC--------Ccc-HHHHHHHHHhcCCCeEEEEE
Confidence 233332111 1111111146776532 122 34788999999999988873
No 100
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=50.52 E-value=71 Score=30.35 Aligned_cols=41 Identities=22% Similarity=0.254 Sum_probs=28.7
Q ss_pred HHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCC
Q 008153 295 QAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGP 344 (576)
Q Consensus 295 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~ 344 (576)
+.|++.+.-...-+|+|+|.|.|. +...|+. |..++|||+.
T Consensus 24 ~~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~-----~~~~v~gvD~ 64 (261)
T 3ege_A 24 NAIINLLNLPKGSVIADIGAGTGG----YSVALAN-----QGLFVYAVEP 64 (261)
T ss_dssp HHHHHHHCCCTTCEEEEETCTTSH----HHHHHHT-----TTCEEEEECS
T ss_pred HHHHHHhCCCCCCEEEEEcCcccH----HHHHHHh-----CCCEEEEEeC
Confidence 446666655566789999999987 3444553 3369999995
No 101
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=49.97 E-value=39 Score=29.81 Aligned_cols=107 Identities=12% Similarity=0.097 Sum_probs=58.4
Q ss_pred CeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCce--eEEeeeecCCCC
Q 008153 305 NRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVE--FEFRGFVCNSLA 382 (576)
Q Consensus 305 ~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVp--FeF~~v~~~~le 382 (576)
+.-.|+|+|-|.|. +...|+.++ .-++|||+. +...++.+.++ ++..|++ .+|.. ..+.
T Consensus 31 ~~~~vLDlGcG~G~----~~~~l~~~~----~~~v~~vD~----~~~~~~~a~~~----~~~~~~~~~~~~~~---~d~~ 91 (177)
T 2esr_A 31 NGGRVLDLFAGSGG----LAIEAVSRG----MSAAVLVEK----NRKAQAIIQDN----IIMTKAENRFTLLK---MEAE 91 (177)
T ss_dssp CSCEEEEETCTTCH----HHHHHHHTT----CCEEEEECC----CHHHHHHHHHH----HHTTTCGGGEEEEC---SCHH
T ss_pred CCCeEEEeCCCCCH----HHHHHHHcC----CCEEEEEEC----CHHHHHHHHHH----HHHcCCCCceEEEE---CcHH
Confidence 34479999999886 344455552 258999994 34555544443 3444553 44442 1222
Q ss_pred CCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH---HhcCCcEEEEEecCCCC
Q 008153 383 DLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI---KAMRPKIITIVEQEANH 441 (576)
Q Consensus 383 dl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I---r~L~PkIvtlvEqeanh 441 (576)
+..+ .. .+.-..++.|..+... ..+.++..+ +-|+|.-+++++.....
T Consensus 92 ~~~~---~~-~~~fD~i~~~~~~~~~-------~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 92 RAID---CL-TGRFDLVFLDPPYAKE-------TIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp HHHH---HB-CSCEEEEEECCSSHHH-------HHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred HhHH---hh-cCCCCEEEECCCCCcc-------hHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 2110 01 1111466666554221 235566666 67899988887655543
No 102
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=49.18 E-value=87 Score=32.44 Aligned_cols=105 Identities=15% Similarity=0.179 Sum_probs=59.2
Q ss_pred CeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEeeeecCCCCCC
Q 008153 305 NRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRGFVCNSLADL 384 (576)
Q Consensus 305 ~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~~v~~~~ledl 384 (576)
+.-+|+|+|.|.|. +...|+.+ + .++|+|+. +...++...+++ +..++..+|.. ..+.+.
T Consensus 233 ~~~~VLDlGcG~G~----~~~~la~~--g---~~V~gvDi----s~~al~~A~~n~----~~~~~~v~~~~---~D~~~~ 292 (381)
T 3dmg_A 233 RGRQVLDLGAGYGA----LTLPLARM--G---AEVVGVED----DLASVLSLQKGL----EANALKAQALH---SDVDEA 292 (381)
T ss_dssp TTCEEEEETCTTST----THHHHHHT--T---CEEEEEES----BHHHHHHHHHHH----HHTTCCCEEEE---CSTTTT
T ss_pred CCCEEEEEeeeCCH----HHHHHHHc--C---CEEEEEEC----CHHHHHHHHHHH----HHcCCCeEEEE---cchhhc
Confidence 44589999999996 44445555 2 38999983 455665554444 34566666653 223222
Q ss_pred CccccccCCCCCceEEEEehhhhhhccCC-CChHHHHHHH-HHhcCCcEEEEEe
Q 008153 385 EPDMLDIRPPEVETVAVNSVFELHRLLAR-PGGIEKVVSS-IKAMRPKIITIVE 436 (576)
Q Consensus 385 ~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~-~~~~d~vL~~-Ir~L~PkIvtlvE 436 (576)
... .+.-..++.|..| |+-... ......+++. .+-|+|.-.+++.
T Consensus 293 ~~~-----~~~fD~Ii~npp~--~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv 339 (381)
T 3dmg_A 293 LTE-----EARFDIIVTNPPF--HVGGAVILDVAQAFVNVAAARLRPGGVFFLV 339 (381)
T ss_dssp SCT-----TCCEEEEEECCCC--CTTCSSCCHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccc-----CCCeEEEEECCch--hhcccccHHHHHHHHHHHHHhcCcCcEEEEE
Confidence 211 1112466666554 442211 1234556654 5778998877765
No 103
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=49.05 E-value=81 Score=28.86 Aligned_cols=106 Identities=18% Similarity=0.168 Sum_probs=56.9
Q ss_pred eEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCc---eeEEeeeecCCCCC
Q 008153 307 VHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGV---EFEFRGFVCNSLAD 383 (576)
Q Consensus 307 VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgV---pFeF~~v~~~~led 383 (576)
-.|+|+|-|.|.- ...++.+ + . -++|||+. +...++.+.+++ +..|+ ..+|.. ....+
T Consensus 55 ~~vLDlGcGtG~~----~~~~~~~-~-~--~~v~gvD~----s~~~l~~a~~~~----~~~~~~~~~v~~~~---~d~~~ 115 (201)
T 2ift_A 55 SECLDGFAGSGSL----GFEALSR-Q-A--KKVTFLEL----DKTVANQLKKNL----QTLKCSSEQAEVIN---QSSLD 115 (201)
T ss_dssp CEEEETTCTTCHH----HHHHHHT-T-C--SEEEEECS----CHHHHHHHHHHH----HHTTCCTTTEEEEC---SCHHH
T ss_pred CeEEEcCCccCHH----HHHHHHc-c-C--CEEEEEEC----CHHHHHHHHHHH----HHhCCCccceEEEE---CCHHH
Confidence 3799999998852 2223333 2 1 48999994 455665554444 33454 344442 12111
Q ss_pred CCccccccCCCC-CceEEEEehhhhhhccCCCChHHHHHHHHHh---cCCcEEEEEecCCCC
Q 008153 384 LEPDMLDIRPPE-VETVAVNSVFELHRLLARPGGIEKVVSSIKA---MRPKIITIVEQEANH 441 (576)
Q Consensus 384 l~~~~L~lr~~~-~EaLaVN~~~~Lh~L~~~~~~~d~vL~~Ir~---L~PkIvtlvEqeanh 441 (576)
+.+ .+..+. -..++.|..| | .+..+.+|+.+.+ |+|.-+++++.....
T Consensus 116 ~~~---~~~~~~~fD~I~~~~~~--~-----~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 116 FLK---QPQNQPHFDVVFLDPPF--H-----FNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp HTT---SCCSSCCEEEEEECCCS--S-----SCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred HHH---hhccCCCCCEEEECCCC--C-----CccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 111 111111 1456666553 2 2356788888865 999987777654443
No 104
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=49.00 E-value=40 Score=34.17 Aligned_cols=114 Identities=14% Similarity=0.142 Sum_probs=62.9
Q ss_pred HHHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCce--e
Q 008153 294 NQAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVE--F 371 (576)
Q Consensus 294 NqAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVp--F 371 (576)
.++|++.+...+.-+|+|+|-|.|. |...++.++ .-++|||+.. ..++... +.++..|++ .
T Consensus 39 ~~~i~~~l~~~~~~~VLDiGcGtG~----ls~~la~~g----~~~V~~vD~s-----~~~~~a~----~~~~~~~l~~~v 101 (348)
T 2y1w_A 39 QRAILQNHTDFKDKIVLDVGCGSGI----LSFFAAQAG----ARKIYAVEAS-----TMAQHAE----VLVKSNNLTDRI 101 (348)
T ss_dssp HHHHHHTGGGTTTCEEEEETCTTSH----HHHHHHHTT----CSEEEEEECS-----THHHHHH----HHHHHTTCTTTE
T ss_pred HHHHHhccccCCcCEEEEcCCCccH----HHHHHHhCC----CCEEEEECCH-----HHHHHHH----HHHHHcCCCCcE
Confidence 3678888765566699999999885 555566552 2589999853 1232222 223333442 3
Q ss_pred EEeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHHHhcCCcEEEEEe
Q 008153 372 EFRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSIKAMRPKIITIVE 436 (576)
Q Consensus 372 eF~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~Ir~L~PkIvtlvE 436 (576)
+|. ...++++.. . +.-..++.+.+ ++++.. ....+.+...-+-|+|.-+++.+
T Consensus 102 ~~~---~~d~~~~~~-----~-~~~D~Ivs~~~--~~~~~~-~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 102 VVI---PGKVEEVSL-----P-EQVDIIISEPM--GYMLFN-ERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp EEE---ESCTTTCCC-----S-SCEEEEEECCC--BTTBTT-TSHHHHHHHGGGGEEEEEEEESC
T ss_pred EEE---EcchhhCCC-----C-CceeEEEEeCc--hhcCCh-HHHHHHHHHHHhhcCCCeEEEEe
Confidence 443 233444321 1 11134444433 455543 23455565656788999887743
No 105
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=48.39 E-value=56 Score=29.28 Aligned_cols=44 Identities=14% Similarity=0.124 Sum_probs=27.5
Q ss_pred CCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHH
Q 008153 304 ANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWK 359 (576)
Q Consensus 304 ~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~r 359 (576)
...-.|+|+|.|.|. +...|+.+ |+. ++|||+. +...++...++
T Consensus 41 ~~~~~vLdiGcG~G~----~~~~l~~~--~~~--~v~~~D~----s~~~~~~a~~~ 84 (215)
T 2pxx_A 41 RPEDRILVLGCGNSA----LSYELFLG--GFP--NVTSVDY----SSVVVAAMQAC 84 (215)
T ss_dssp CTTCCEEEETCTTCS----HHHHHHHT--TCC--CEEEEES----CHHHHHHHHHH
T ss_pred CCCCeEEEECCCCcH----HHHHHHHc--CCC--cEEEEeC----CHHHHHHHHHh
Confidence 344579999999886 34455554 333 8999984 34455444443
No 106
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=47.98 E-value=57 Score=28.89 Aligned_cols=42 Identities=19% Similarity=0.167 Sum_probs=28.4
Q ss_pred eEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHH
Q 008153 307 VHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLA 361 (576)
Q Consensus 307 VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~ 361 (576)
-+|+|+|-|.|. +...||.+ ..++|||+. +...++.+.+++.
T Consensus 24 ~~vLDiGcG~G~----~~~~la~~-----~~~v~~vD~----s~~~l~~a~~~~~ 65 (185)
T 3mti_A 24 SIVVDATMGNGN----DTAFLAGL-----SKKVYAFDV----QEQALGKTSQRLS 65 (185)
T ss_dssp CEEEESCCTTSH----HHHHHHTT-----SSEEEEEES----CHHHHHHHHHHHH
T ss_pred CEEEEEcCCCCH----HHHHHHHh-----CCEEEEEEC----CHHHHHHHHHHHH
Confidence 379999999886 44456666 258999984 4556665555543
No 107
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=47.97 E-value=87 Score=28.73 Aligned_cols=109 Identities=13% Similarity=0.200 Sum_probs=57.7
Q ss_pred HHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEe
Q 008153 295 QAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFR 374 (576)
Q Consensus 295 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~ 374 (576)
..|++.+.....-+|+|+|-|.|. +...|+.+ |. -++|||+. +...++...+++. .-+ ++|.
T Consensus 33 ~~l~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~--~~--~~v~~vD~----s~~~~~~a~~~~~----~~~--~~~~ 94 (243)
T 3bkw_A 33 PALRAMLPEVGGLRIVDLGCGFGW----FCRWAHEH--GA--SYVLGLDL----SEKMLARARAAGP----DTG--ITYE 94 (243)
T ss_dssp HHHHHHSCCCTTCEEEEETCTTCH----HHHHHHHT--TC--SEEEEEES----CHHHHHHHHHTSC----SSS--EEEE
T ss_pred HHHHHhccccCCCEEEEEcCcCCH----HHHHHHHC--CC--CeEEEEcC----CHHHHHHHHHhcc----cCC--ceEE
Confidence 456666665556689999999885 44455655 22 28999984 2344433322221 112 3333
Q ss_pred eeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEE
Q 008153 375 GFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIV 435 (576)
Q Consensus 375 ~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlv 435 (576)
. ..+.++. ...+ ..=+|-+...||++.+ ...+|+.+ +-|+|.-.+++
T Consensus 95 ~---~d~~~~~-----~~~~--~fD~v~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~~ 142 (243)
T 3bkw_A 95 R---ADLDKLH-----LPQD--SFDLAYSSLALHYVED----VARLFRTVHQALSPGGHFVF 142 (243)
T ss_dssp E---CCGGGCC-----CCTT--CEEEEEEESCGGGCSC----HHHHHHHHHHHEEEEEEEEE
T ss_pred E---cChhhcc-----CCCC--CceEEEEeccccccch----HHHHHHHHHHhcCcCcEEEE
Confidence 2 1222221 1111 2223334456787732 45566655 67899866654
No 108
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=47.02 E-value=94 Score=28.87 Aligned_cols=116 Identities=15% Similarity=0.146 Sum_probs=60.4
Q ss_pred HHHHHHHhhccC-----CeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHc
Q 008153 293 ANQAILEAFNNA-----NRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTI 367 (576)
Q Consensus 293 ANqAILEA~~g~-----~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~sl 367 (576)
....+++.+... +.-.|+|+|.|.|. +...|+.+- ..++|||+. +...++...+++...-
T Consensus 62 ~~~~~~~~l~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~----~~~v~~vD~----s~~~~~~a~~~~~~~~--- 126 (241)
T 2ex4_A 62 SSRKFLQRFLREGPNKTGTSCALDCGAGIGR----ITKRLLLPL----FREVDMVDI----TEDFLVQAKTYLGEEG--- 126 (241)
T ss_dssp HHHHHHHGGGC----CCCCSEEEEETCTTTH----HHHHTTTTT----CSEEEEEES----CHHHHHHHHHHTGGGG---
T ss_pred hHHHHHHHHHHhcccCCCCCEEEEECCCCCH----HHHHHHHhc----CCEEEEEeC----CHHHHHHHHHHhhhcC---
Confidence 444555555321 35689999999886 445555543 248999984 3445554444332210
Q ss_pred CceeEEeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEE
Q 008153 368 GVEFEFRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIV 435 (576)
Q Consensus 368 gVpFeF~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlv 435 (576)
+...+|.. ..+.++. ... +..=+|-|...||++.+ ..+..+|+.+ +-|+|.-++++
T Consensus 127 ~~~~~~~~---~d~~~~~-----~~~--~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~i 183 (241)
T 2ex4_A 127 KRVRNYFC---CGLQDFT-----PEP--DSYDVIWIQWVIGHLTD--QHLAEFLRRCKGSLRPNGIIVI 183 (241)
T ss_dssp GGEEEEEE---CCGGGCC-----CCS--SCEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEE
T ss_pred CceEEEEE---cChhhcC-----CCC--CCEEEEEEcchhhhCCH--HHHHHHHHHHHHhcCCCeEEEE
Confidence 22344442 2233322 111 12223333456788743 1245666655 66899866654
No 109
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=46.93 E-value=95 Score=31.57 Aligned_cols=135 Identities=10% Similarity=0.021 Sum_probs=71.2
Q ss_pred eeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHc-CceeEEeeeecCCCCCC
Q 008153 306 RVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTI-GVEFEFRGFVCNSLADL 384 (576)
Q Consensus 306 ~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~sl-gVpFeF~~v~~~~ledl 384 (576)
.-+|+|+|.|.|. +...|+.+ +|..+||+|+. +...++...+++..++..+ +-.++|.. ....+.
T Consensus 121 ~~~VLdIG~G~G~----~a~~la~~---~~~~~V~~VDi----s~~~l~~Ar~~~~~~~~gl~~~rv~~~~---~D~~~~ 186 (334)
T 1xj5_A 121 PKKVLVIGGGDGG----VLREVARH---ASIEQIDMCEI----DKMVVDVSKQFFPDVAIGYEDPRVNLVI---GDGVAF 186 (334)
T ss_dssp CCEEEEETCSSSH----HHHHHTTC---TTCCEEEEEES----CHHHHHHHHHHCHHHHGGGGSTTEEEEE---SCHHHH
T ss_pred CCEEEEECCCccH----HHHHHHHc---CCCCEEEEEEC----CHHHHHHHHHHHHhhccccCCCcEEEEE---CCHHHH
Confidence 3589999999886 56667765 35579999984 3556666666655543323 11234432 111111
Q ss_pred CccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEEecCCCCCCchhHHHHHHHHHHHHHHhh
Q 008153 385 EPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIVEQEANHNSPVFLDRFTEALHYYSSLFD 462 (576)
Q Consensus 385 ~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlvEqeanhNsp~F~~RF~EAL~yYsalFD 462 (576)
-+ ....+.-.++++|+....+.... -....+++.+ +.|+|.-++++..+.-...+.. +.+.+.-...+|.
T Consensus 187 l~---~~~~~~fDlIi~d~~~p~~~~~~--l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~---~~~~~~~l~~~F~ 257 (334)
T 1xj5_A 187 LK---NAAEGSYDAVIVDSSDPIGPAKE--LFEKPFFQSVARALRPGGVVCTQAESLWLHMDI---IEDIVSNCREIFK 257 (334)
T ss_dssp HH---TSCTTCEEEEEECCCCTTSGGGG--GGSHHHHHHHHHHEEEEEEEEEECCCTTTCHHH---HHHHHHHHHHHCS
T ss_pred HH---hccCCCccEEEECCCCccCcchh--hhHHHHHHHHHHhcCCCcEEEEecCCccccHHH---HHHHHHHHHHhCc
Confidence 00 01111124677766432321100 0124566554 7789999888865555444433 3344444456665
No 110
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=45.50 E-value=77 Score=28.62 Aligned_cols=106 Identities=16% Similarity=0.175 Sum_probs=58.0
Q ss_pred HHHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEE
Q 008153 294 NQAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEF 373 (576)
Q Consensus 294 NqAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF 373 (576)
.+.|++.+. ...-+|+|+|.|.|. +...|+.+ + .++|||+.. ...+ +.|+.... +|
T Consensus 22 ~~~l~~~~~-~~~~~vLdiG~G~G~----~~~~l~~~-~----~~~~~~D~~----~~~~--------~~~~~~~~--~~ 77 (230)
T 3cc8_A 22 NPNLLKHIK-KEWKEVLDIGCSSGA----LGAAIKEN-G----TRVSGIEAF----PEAA--------EQAKEKLD--HV 77 (230)
T ss_dssp CHHHHTTCC-TTCSEEEEETCTTSH----HHHHHHTT-T----CEEEEEESS----HHHH--------HHHHTTSS--EE
T ss_pred HHHHHHHhc-cCCCcEEEeCCCCCH----HHHHHHhc-C----CeEEEEeCC----HHHH--------HHHHHhCC--cE
Confidence 345666665 556789999999884 55667766 2 589999842 3333 33333322 23
Q ss_pred eeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEE
Q 008153 374 RGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIV 435 (576)
Q Consensus 374 ~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlv 435 (576)
. ...+.++. +....+ ..=+|-|...|||+.+ ...+|+.+ +-|+|.-.+++
T Consensus 78 ~---~~d~~~~~---~~~~~~--~fD~v~~~~~l~~~~~----~~~~l~~~~~~L~~gG~l~~ 128 (230)
T 3cc8_A 78 V---LGDIETMD---MPYEEE--QFDCVIFGDVLEHLFD----PWAVIEKVKPYIKQNGVILA 128 (230)
T ss_dssp E---ESCTTTCC---CCSCTT--CEEEEEEESCGGGSSC----HHHHHHHTGGGEEEEEEEEE
T ss_pred E---EcchhhcC---CCCCCC--ccCEEEECChhhhcCC----HHHHHHHHHHHcCCCCEEEE
Confidence 2 22333221 112211 2223334456777743 35677666 56799765554
No 111
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=45.35 E-value=82 Score=30.43 Aligned_cols=105 Identities=12% Similarity=0.037 Sum_probs=55.9
Q ss_pred CeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHH-H------H-h------HcCce
Q 008153 305 NRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQ-L------A-D------TIGVE 370 (576)
Q Consensus 305 ~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~-f------A-~------slgVp 370 (576)
+.-.|+|+|.|.|. ++..||.+ | .++|||+. +...++...++... + + . ..+..
T Consensus 68 ~~~~vLD~GCG~G~----~~~~La~~-G----~~V~gvD~----S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (252)
T 2gb4_A 68 SGLRVFFPLCGKAI----EMKWFADR-G----HTVVGVEI----SEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGS 134 (252)
T ss_dssp CSCEEEETTCTTCT----HHHHHHHT-T----CEEEEECS----CHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSS
T ss_pred CCCeEEEeCCCCcH----HHHHHHHC-C----CeEEEEEC----CHHHHHHHHHhcccccccccccccccccccccCCCc
Confidence 45689999999886 45667766 3 48999994 34455433222110 0 0 0 01123
Q ss_pred eEEeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEE
Q 008153 371 FEFRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIIT 433 (576)
Q Consensus 371 FeF~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvt 433 (576)
.+|.. ..+.++.... .+..=+|-+...||+|.. ..+..+++.+ +-|+|.-..
T Consensus 135 i~~~~---~D~~~l~~~~------~~~FD~V~~~~~l~~l~~--~~~~~~l~~~~~~LkpGG~l 187 (252)
T 2gb4_A 135 ISLYC---CSIFDLPRAN------IGKFDRIWDRGALVAINP--GDHDRYADIILSLLRKEFQY 187 (252)
T ss_dssp EEEEE---SCTTTGGGGC------CCCEEEEEESSSTTTSCG--GGHHHHHHHHHHTEEEEEEE
T ss_pred eEEEE---CccccCCccc------CCCEEEEEEhhhhhhCCH--HHHHHHHHHHHHHcCCCeEE
Confidence 34432 2333333210 013334444556787742 3466777776 558998655
No 112
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=45.00 E-value=80 Score=28.89 Aligned_cols=110 Identities=15% Similarity=0.151 Sum_probs=56.9
Q ss_pred CeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCc-eeEEeeeecCCCCC
Q 008153 305 NRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGV-EFEFRGFVCNSLAD 383 (576)
Q Consensus 305 ~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgV-pFeF~~v~~~~led 383 (576)
..-.|+|+|.|.|. +...||.+. |..++|||+. +...++.+.+++ +..|+ ..+|.. ..+.+
T Consensus 41 ~~~~vLDiGcG~G~----~~~~la~~~---p~~~v~gvD~----s~~~l~~a~~~~----~~~~~~~v~~~~---~d~~~ 102 (214)
T 1yzh_A 41 DNPIHVEVGSGKGA----FVSGMAKQN---PDINYIGIDI----QKSVLSYALDKV----LEVGVPNIKLLW---VDGSD 102 (214)
T ss_dssp CCCEEEEESCTTSH----HHHHHHHHC---TTSEEEEEES----CHHHHHHHHHHH----HHHCCSSEEEEE---CCSSC
T ss_pred CCCeEEEEccCcCH----HHHHHHHHC---CCCCEEEEEc----CHHHHHHHHHHH----HHcCCCCEEEEe---CCHHH
Confidence 34469999999986 444455432 3578999984 345555444443 33444 244432 23333
Q ss_pred CCccccccCCCCCceEEEEehhhh----hhccCCCChHHHHHHHHH-hcCCcEEEEEec
Q 008153 384 LEPDMLDIRPPEVETVAVNSVFEL----HRLLARPGGIEKVVSSIK-AMRPKIITIVEQ 437 (576)
Q Consensus 384 l~~~~L~lr~~~~EaLaVN~~~~L----h~L~~~~~~~d~vL~~Ir-~L~PkIvtlvEq 437 (576)
+.. . +..+.-..+++|..... |+. +......+|..+. .|+|.-+++++-
T Consensus 103 ~~~-~--~~~~~~D~i~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 103 LTD-Y--FEDGEIDRLYLNFSDPWPKKRHEK--RRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp GGG-T--SCTTCCSEEEEESCCCCCSGGGGG--GSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred HHh-h--cCCCCCCEEEEECCCCccccchhh--hccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 221 0 11111246777743211 100 0012356777764 589997777754
No 113
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=44.94 E-value=47 Score=30.86 Aligned_cols=30 Identities=10% Similarity=0.080 Sum_probs=23.0
Q ss_pred eeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCC
Q 008153 306 RVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGP 344 (576)
Q Consensus 306 ~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~ 344 (576)
.-+|+|+|.|.|. +...|+.+ + .++|||+.
T Consensus 49 ~~~vLDiGcG~G~----~~~~l~~~-~----~~v~~vD~ 78 (226)
T 3m33_A 49 QTRVLEAGCGHGP----DAARFGPQ-A----ARWAAYDF 78 (226)
T ss_dssp TCEEEEESCTTSH----HHHHHGGG-S----SEEEEEES
T ss_pred CCeEEEeCCCCCH----HHHHHHHc-C----CEEEEEEC
Confidence 3579999999987 56667766 2 48999984
No 114
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=44.39 E-value=90 Score=30.93 Aligned_cols=114 Identities=10% Similarity=0.044 Sum_probs=57.5
Q ss_pred eeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcC-ceeEEeeeecCCCCCC
Q 008153 306 RVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIG-VEFEFRGFVCNSLADL 384 (576)
Q Consensus 306 ~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slg-VpFeF~~v~~~~ledl 384 (576)
.-.|+|+|.|.|. +...|+.+ +|..+||+|+. +...++...+++..++..++ -.++|.. ....++
T Consensus 96 ~~~VLdiG~G~G~----~~~~l~~~---~~~~~v~~vDi----d~~~i~~a~~~~~~~~~~~~~~~v~~~~---~D~~~~ 161 (304)
T 3bwc_A 96 PERVLIIGGGDGG----VLREVLRH---GTVEHCDLVDI----DGEVMEQSKQHFPQISRSLADPRATVRV---GDGLAF 161 (304)
T ss_dssp CCEEEEEECTTSH----HHHHHHTC---TTCCEEEEEES----CHHHHHHHHHHCHHHHGGGGCTTEEEEE---SCHHHH
T ss_pred CCeEEEEcCCCCH----HHHHHHhC---CCCCEEEEEEC----CHHHHHHHHHHhHHhhcccCCCcEEEEE---CcHHHH
Confidence 3479999999886 56666655 34579999984 34556555555554443321 1233332 111111
Q ss_pred CccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEEecC
Q 008153 385 EPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIVEQE 438 (576)
Q Consensus 385 ~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlvEqe 438 (576)
......+.-.++++|+.. +......--...+++.+ +.|+|.-++++..+
T Consensus 162 ---~~~~~~~~fDvIi~d~~~--~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 211 (304)
T 3bwc_A 162 ---VRQTPDNTYDVVIIDTTD--PAGPASKLFGEAFYKDVLRILKPDGICCNQGE 211 (304)
T ss_dssp ---HHSSCTTCEEEEEEECC-----------CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ---HHhccCCceeEEEECCCC--ccccchhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 001011122577777543 21111000014566655 77899888777543
No 115
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=43.90 E-value=1.8e+02 Score=26.10 Aligned_cols=108 Identities=9% Similarity=0.125 Sum_probs=58.8
Q ss_pred HHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCce-eEE
Q 008153 295 QAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVE-FEF 373 (576)
Q Consensus 295 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVp-FeF 373 (576)
..+++.+.-...-.|+|+|.|.|. +...|+.+ + |..++|||+. +...++.+.+++ +..|++ ++|
T Consensus 30 ~~~l~~l~~~~~~~vLDiG~G~G~----~~~~la~~--~-~~~~v~~vD~----s~~~~~~a~~~~----~~~~~~~v~~ 94 (204)
T 3e05_A 30 AVTLSKLRLQDDLVMWDIGAGSAS----VSIEASNL--M-PNGRIFALER----NPQYLGFIRDNL----KKFVARNVTL 94 (204)
T ss_dssp HHHHHHTTCCTTCEEEEETCTTCH----HHHHHHHH--C-TTSEEEEEEC----CHHHHHHHHHHH----HHHTCTTEEE
T ss_pred HHHHHHcCCCCCCEEEEECCCCCH----HHHHHHHH--C-CCCEEEEEeC----CHHHHHHHHHHH----HHhCCCcEEE
Confidence 345666665666789999999886 33344443 1 4569999984 345555544443 334442 344
Q ss_pred eeeecCCC-CCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEE
Q 008153 374 RGFVCNSL-ADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIV 435 (576)
Q Consensus 374 ~~v~~~~l-edl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlv 435 (576)
.. ... +.+.. .. .-..++++..+ + ....+|+.+ +.|+|.-.+++
T Consensus 95 ~~---~d~~~~~~~----~~--~~D~i~~~~~~--~-------~~~~~l~~~~~~LkpgG~l~~ 140 (204)
T 3e05_A 95 VE---AFAPEGLDD----LP--DPDRVFIGGSG--G-------MLEEIIDAVDRRLKSEGVIVL 140 (204)
T ss_dssp EE---CCTTTTCTT----SC--CCSEEEESCCT--T-------CHHHHHHHHHHHCCTTCEEEE
T ss_pred Ee---CChhhhhhc----CC--CCCEEEECCCC--c-------CHHHHHHHHHHhcCCCeEEEE
Confidence 32 122 21111 11 11455555433 1 245566655 66899877665
No 116
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=43.00 E-value=1.5e+02 Score=28.13 Aligned_cols=39 Identities=5% Similarity=0.079 Sum_probs=25.4
Q ss_pred ceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEE
Q 008153 397 ETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIV 435 (576)
Q Consensus 397 EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlv 435 (576)
..=+|-|.+.||++.........+|+.| |-|+|.-..++
T Consensus 156 ~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~ 195 (263)
T 2a14_A 156 LADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVT 195 (263)
T ss_dssp CEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred CCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 4566777788898754323455666666 56899876664
No 117
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=42.68 E-value=1.1e+02 Score=29.66 Aligned_cols=110 Identities=11% Similarity=0.095 Sum_probs=59.5
Q ss_pred HHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCce--eE
Q 008153 295 QAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVE--FE 372 (576)
Q Consensus 295 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVp--Fe 372 (576)
+.|++.+.-...-+|+|+|.|.|. +...|+.+.+ .++|||+. +...++...+++ +..|+. .+
T Consensus 80 ~~~~~~~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~----s~~~~~~a~~~~----~~~~~~~~v~ 143 (318)
T 2fk8_A 80 DLNLDKLDLKPGMTLLDIGCGWGT----TMRRAVERFD----VNVIGLTL----SKNQHARCEQVL----ASIDTNRSRQ 143 (318)
T ss_dssp HHHHTTSCCCTTCEEEEESCTTSH----HHHHHHHHHC----CEEEEEES----CHHHHHHHHHHH----HTSCCSSCEE
T ss_pred HHHHHhcCCCCcCEEEEEcccchH----HHHHHHHHCC----CEEEEEEC----CHHHHHHHHHHH----HhcCCCCceE
Confidence 455666654556689999998875 3344444322 38999984 344554443333 333442 44
Q ss_pred EeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEE
Q 008153 373 FRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIV 435 (576)
Q Consensus 373 F~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlv 435 (576)
|.. ..++++. +.-.+++.+ ..||++.. .....+|+.+ +-|+|.-.+++
T Consensus 144 ~~~---~d~~~~~--------~~fD~v~~~--~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~ 192 (318)
T 2fk8_A 144 VLL---QGWEDFA--------EPVDRIVSI--EAFEHFGH--ENYDDFFKRCFNIMPADGRMTV 192 (318)
T ss_dssp EEE---SCGGGCC--------CCCSEEEEE--SCGGGTCG--GGHHHHHHHHHHHSCTTCEEEE
T ss_pred EEE---CChHHCC--------CCcCEEEEe--ChHHhcCH--HHHHHHHHHHHHhcCCCcEEEE
Confidence 432 2233332 111344444 45777742 2355666655 66899855554
No 118
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=42.34 E-value=1.8e+02 Score=25.79 Aligned_cols=98 Identities=18% Similarity=0.247 Sum_probs=52.3
Q ss_pred EEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEeeeecCCCCCCCcc
Q 008153 308 HVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRGFVCNSLADLEPD 387 (576)
Q Consensus 308 HIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~~v~~~~ledl~~~ 387 (576)
.|+|+|-|.|. +...|+.+ + .++|||+. +...++...+++ +..++..+|... .+.++.
T Consensus 32 ~vLdiGcG~G~----~~~~l~~~-~----~~v~~vD~----s~~~~~~a~~~~----~~~~~~~~~~~~---d~~~~~-- 89 (202)
T 2kw5_A 32 KILCLAEGEGR----NACFLASL-G----YEVTAVDQ----SSVGLAKAKQLA----QEKGVKITTVQS---NLADFD-- 89 (202)
T ss_dssp EEEECCCSCTH----HHHHHHTT-T----CEEEEECS----SHHHHHHHHHHH----HHHTCCEEEECC---BTTTBS--
T ss_pred CEEEECCCCCH----hHHHHHhC-C----CeEEEEEC----CHHHHHHHHHHH----HhcCCceEEEEc---ChhhcC--
Confidence 89999998886 44556655 2 38999984 344555444443 333555555532 233322
Q ss_pred ccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEEe
Q 008153 388 MLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIVE 436 (576)
Q Consensus 388 ~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlvE 436 (576)
...+.-..++.+ + .++ .......+|+.+ +.|+|.-++++.
T Consensus 90 ---~~~~~fD~v~~~--~--~~~--~~~~~~~~l~~~~~~L~pgG~l~~~ 130 (202)
T 2kw5_A 90 ---IVADAWEGIVSI--F--CHL--PSSLRQQLYPKVYQGLKPGGVFILE 130 (202)
T ss_dssp ---CCTTTCSEEEEE--C--CCC--CHHHHHHHHHHHHTTCCSSEEEEEE
T ss_pred ---CCcCCccEEEEE--h--hcC--CHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 111111344433 2 222 112355666665 667998776653
No 119
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=41.33 E-value=2.5e+02 Score=27.07 Aligned_cols=100 Identities=15% Similarity=0.190 Sum_probs=54.3
Q ss_pred EEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHc-CceeEEeeeecCCCCCCCc
Q 008153 308 HVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTI-GVEFEFRGFVCNSLADLEP 386 (576)
Q Consensus 308 HIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~sl-gVpFeF~~v~~~~ledl~~ 386 (576)
.|+|+|.|.|. +...|+.+ + -++|||++. ...+ +.|+.. +| +|.. .+.+++.
T Consensus 42 ~vLDvGcGtG~----~~~~l~~~-~----~~v~gvD~s----~~ml--------~~a~~~~~v--~~~~---~~~e~~~- 94 (257)
T 4hg2_A 42 DALDCGCGSGQ----ASLGLAEF-F----ERVHAVDPG----EAQI--------RQALRHPRV--TYAV---APAEDTG- 94 (257)
T ss_dssp EEEEESCTTTT----THHHHHTT-C----SEEEEEESC----HHHH--------HTCCCCTTE--EEEE---CCTTCCC-
T ss_pred CEEEEcCCCCH----HHHHHHHh-C----CEEEEEeCc----HHhh--------hhhhhcCCc--eeeh---hhhhhhc-
Confidence 58999999985 44556654 2 379999853 2233 233332 33 3432 2344432
Q ss_pred cccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEE-EecCCCCCCch
Q 008153 387 DMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITI-VEQEANHNSPV 445 (576)
Q Consensus 387 ~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtl-vEqeanhNsp~ 445 (576)
+.. +..=+|-|...+|++ + .+.+|..+ |-|+|.-+++ +........|.
T Consensus 95 ----~~~--~sfD~v~~~~~~h~~-~----~~~~~~e~~rvLkpgG~l~~~~~~~~~~~~~ 144 (257)
T 4hg2_A 95 ----LPP--ASVDVAIAAQAMHWF-D----LDRFWAELRRVARPGAVFAAVTYGLTRVDPE 144 (257)
T ss_dssp ----CCS--SCEEEEEECSCCTTC-C----HHHHHHHHHHHEEEEEEEEEEEECCCBCCHH
T ss_pred ----ccC--CcccEEEEeeehhHh-h----HHHHHHHHHHHcCCCCEEEEEECCCCCCCHH
Confidence 222 234445555667876 2 34566555 6689987665 44433333343
No 120
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=40.94 E-value=53 Score=35.26 Aligned_cols=113 Identities=14% Similarity=0.163 Sum_probs=62.5
Q ss_pred HHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCce--eE
Q 008153 295 QAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVE--FE 372 (576)
Q Consensus 295 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVp--Fe 372 (576)
.+|++.+...+.-+|+|+|-|.|. +...|+.+ +..++|||+.. ..++.. .+.++..|+. .+
T Consensus 148 ~~il~~l~~~~~~~VLDiGcGtG~----la~~la~~----~~~~V~gvD~s-----~~l~~A----~~~~~~~gl~~~v~ 210 (480)
T 3b3j_A 148 RAILQNHTDFKDKIVLDVGCGSGI----LSFFAAQA----GARKIYAVEAS-----TMAQHA----EVLVKSNNLTDRIV 210 (480)
T ss_dssp HHHHHTGGGTTTCEEEEESCSTTH----HHHHHHHT----TCSEEEEEECH-----HHHHHH----HHHHHHTTCTTTEE
T ss_pred HHHHHhhhhcCCCEEEEecCcccH----HHHHHHHc----CCCEEEEEEcH-----HHHHHH----HHHHHHcCCCCcEE
Confidence 467777765555699999999886 44466664 23699999842 233222 2334444552 44
Q ss_pred EeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHHHhcCCcEEEEEe
Q 008153 373 FRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSIKAMRPKIITIVE 436 (576)
Q Consensus 373 F~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~Ir~L~PkIvtlvE 436 (576)
|.. ..++++. +. +.-..++.|.+ ++++.. ....+.+...-+-|+|.-+++.+
T Consensus 211 ~~~---~d~~~~~-----~~-~~fD~Ivs~~~--~~~~~~-e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 211 VIP---GKVEEVS-----LP-EQVDIIISEPM--GYMLFN-ERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp EEE---SCTTTCC-----CS-SCEEEEECCCC--HHHHTC-HHHHHHHHHGGGGEEEEEEEESC
T ss_pred EEE---CchhhCc-----cC-CCeEEEEEeCc--hHhcCc-HHHHHHHHHHHHhcCCCCEEEEE
Confidence 442 3344432 11 11134554433 344432 12345555555788999888754
No 121
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=40.09 E-value=1e+02 Score=29.18 Aligned_cols=107 Identities=14% Similarity=0.158 Sum_probs=56.0
Q ss_pred CeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCc--eeEEeeeecCCCC
Q 008153 305 NRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGV--EFEFRGFVCNSLA 382 (576)
Q Consensus 305 ~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgV--pFeF~~v~~~~le 382 (576)
+.-+|+|+|.|.|.--.. |+.++ ..++|||+. +...++...+++ ...++ ..+|.. ..+.
T Consensus 64 ~~~~vLDiGcG~G~~~~~----l~~~~----~~~v~gvD~----s~~~~~~a~~~~----~~~~~~~~v~~~~---~d~~ 124 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLK----YERAG----IGEYYGVDI----AEVSINDARVRA----RNMKRRFKVFFRA---QDSY 124 (298)
T ss_dssp TTCEEEEETCTTTTTHHH----HHHHT----CSEEEEEES----CHHHHHHHHHHH----HTSCCSSEEEEEE---SCTT
T ss_pred CCCeEEEECCCCCHHHHH----HHHCC----CCEEEEEEC----CHHHHHHHHHHH----HhcCCCccEEEEE---CCcc
Confidence 345899999999863332 44331 248999984 345555444443 33344 234432 2333
Q ss_pred CCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEEe
Q 008153 383 DLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIVE 436 (576)
Q Consensus 383 dl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlvE 436 (576)
++. +. .. +..=+|-|.+.||++.........+|+.+ +-|+|.-.+++.
T Consensus 125 ~~~---~~-~~--~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 173 (298)
T 1ri5_A 125 GRH---MD-LG--KEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT 173 (298)
T ss_dssp TSC---CC-CS--SCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred ccc---cC-CC--CCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 321 10 11 12323334455777543323456677665 668998766653
No 122
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=37.63 E-value=1.6e+02 Score=26.43 Aligned_cols=98 Identities=13% Similarity=0.133 Sum_probs=52.9
Q ss_pred CeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEeeeecCCCCCC
Q 008153 305 NRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRGFVCNSLADL 384 (576)
Q Consensus 305 ~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~~v~~~~ledl 384 (576)
+.-+|+|+|-|.|. +...|+.+ |+ -++|||+. +...++.+..+ ++..|+..+|.. ....++
T Consensus 49 ~~~~vlD~g~G~G~----~~~~l~~~--~~--~~v~~vD~----~~~~~~~a~~~----~~~~~~~~~~~~---~d~~~~ 109 (207)
T 1wy7_A 49 EGKVVADLGAGTGV----LSYGALLL--GA--KEVICVEV----DKEAVDVLIEN----LGEFKGKFKVFI---GDVSEF 109 (207)
T ss_dssp TTCEEEEETCTTCH----HHHHHHHT--TC--SEEEEEES----CHHHHHHHHHH----TGGGTTSEEEEE---SCGGGC
T ss_pred CcCEEEEeeCCCCH----HHHHHHHc--CC--CEEEEEEC----CHHHHHHHHHH----HHHcCCCEEEEE---CchHHc
Confidence 34589999999987 44556655 22 27999984 34455444333 334455455542 233333
Q ss_pred CccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHHHhcCCcEEEE
Q 008153 385 EPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSIKAMRPKIITI 434 (576)
Q Consensus 385 ~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~Ir~L~PkIvtl 434 (576)
.. . -..++.|..+.. .. .+....+|+.+.++- ..+.+
T Consensus 110 ~~-----~---~D~v~~~~p~~~--~~--~~~~~~~l~~~~~~l-~~~~~ 146 (207)
T 1wy7_A 110 NS-----R---VDIVIMNPPFGS--QR--KHADRPFLLKAFEIS-DVVYS 146 (207)
T ss_dssp CC-----C---CSEEEECCCCSS--SS--TTTTHHHHHHHHHHC-SEEEE
T ss_pred CC-----C---CCEEEEcCCCcc--cc--CCchHHHHHHHHHhc-CcEEE
Confidence 21 1 258888876433 21 133456666665554 44333
No 123
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=37.12 E-value=1.4e+02 Score=26.63 Aligned_cols=102 Identities=11% Similarity=0.173 Sum_probs=54.5
Q ss_pred eeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEeeeecCCCCCCC
Q 008153 306 RVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRGFVCNSLADLE 385 (576)
Q Consensus 306 ~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~~v~~~~ledl~ 385 (576)
.-+|+|+|-|.|.-...++ +. ++ .++|||+. +...++...+++. ..+..++|.. ..++++.
T Consensus 24 ~~~vLDiGcG~G~~~~~~~---~~-~~----~~v~~vD~----s~~~~~~a~~~~~----~~~~~~~~~~---~d~~~~~ 84 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIF---VE-DG----YKTYGIEI----SDLQLKKAENFSR----ENNFKLNISK---GDIRKLP 84 (209)
T ss_dssp CSEEEEESCCSSSCTHHHH---HH-TT----CEEEEEEC----CHHHHHHHHHHHH----HHTCCCCEEE---CCTTSCC
T ss_pred CCEEEEECCCCCHHHHHHH---Hh-CC----CEEEEEEC----CHHHHHHHHHHHH----hcCCceEEEE---CchhhCC
Confidence 3479999999886444333 22 22 48999984 3455555444433 2333444442 2233322
Q ss_pred ccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEE
Q 008153 386 PDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIV 435 (576)
Q Consensus 386 ~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlv 435 (576)
...+ ..=+|-|...+||+. +.....+|+.+ +.|+|.-++++
T Consensus 85 -----~~~~--~fD~v~~~~~l~~~~--~~~~~~~l~~~~~~LkpgG~l~~ 126 (209)
T 2p8j_A 85 -----FKDE--SMSFVYSYGTIFHMR--KNDVKEAIDEIKRVLKPGGLACI 126 (209)
T ss_dssp -----SCTT--CEEEEEECSCGGGSC--HHHHHHHHHHHHHHEEEEEEEEE
T ss_pred -----CCCC--ceeEEEEcChHHhCC--HHHHHHHHHHHHHHcCCCcEEEE
Confidence 2111 222333445677773 23355666655 67899876665
No 124
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=36.08 E-value=1.9e+02 Score=30.40 Aligned_cols=95 Identities=24% Similarity=0.333 Sum_probs=58.5
Q ss_pred eEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEeeeecCCCCCCCc
Q 008153 307 VHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRGFVCNSLADLEP 386 (576)
Q Consensus 307 VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~~v~~~~ledl~~ 386 (576)
-.|+|+|-|.|. +...||.+ + -+++||+. +...++...+++ +..|++.+|.. .+.+++.+
T Consensus 292 ~~VLDlgcG~G~----~sl~la~~-~----~~V~gvD~----s~~ai~~A~~n~----~~ngl~v~~~~---~d~~~~~~ 351 (425)
T 2jjq_A 292 EKILDMYSGVGT----FGIYLAKR-G----FNVKGFDS----NEFAIEMARRNV----EINNVDAEFEV---ASDREVSV 351 (425)
T ss_dssp SEEEEETCTTTH----HHHHHHHT-T----CEEEEEES----CHHHHHHHHHHH----HHHTCCEEEEE---CCTTTCCC
T ss_pred CEEEEeeccchH----HHHHHHHc-C----CEEEEEEC----CHHHHHHHHHHH----HHcCCcEEEEE---CChHHcCc
Confidence 378999999886 33345554 2 38999983 455665554443 44566555543 33444322
Q ss_pred cccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHHHhcCCcEEEEEe
Q 008153 387 DMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSIKAMRPKIITIVE 436 (576)
Q Consensus 387 ~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~Ir~L~PkIvtlvE 436 (576)
. +. .++++|-. +.+..+.++..++.++|+-++.+.
T Consensus 352 ~----~f---D~Vv~dPP--------r~g~~~~~~~~l~~l~p~givyvs 386 (425)
T 2jjq_A 352 K----GF---DTVIVDPP--------RAGLHPRLVKRLNREKPGVIVYVS 386 (425)
T ss_dssp T----TC---SEEEECCC--------TTCSCHHHHHHHHHHCCSEEEEEE
T ss_pred c----CC---CEEEEcCC--------ccchHHHHHHHHHhcCCCcEEEEE
Confidence 2 22 47777632 224456799999999999888874
No 125
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=34.78 E-value=2.9e+02 Score=25.86 Aligned_cols=96 Identities=21% Similarity=0.213 Sum_probs=50.5
Q ss_pred CeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEeeeecCCCCCC
Q 008153 305 NRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRGFVCNSLADL 384 (576)
Q Consensus 305 ~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~~v~~~~ledl 384 (576)
..-.|+|+|-|.|. +...|+.+ + .++|||+. +...++...++.. +. |. ...++++
T Consensus 54 ~~~~vLDiGcG~G~----~~~~l~~~-~----~~v~gvD~----s~~~l~~a~~~~~------~~---~~---~~d~~~~ 108 (260)
T 2avn_A 54 NPCRVLDLGGGTGK----WSLFLQER-G----FEVVLVDP----SKEMLEVAREKGV------KN---VV---EAKAEDL 108 (260)
T ss_dssp SCCEEEEETCTTCH----HHHHHHTT-T----CEEEEEES----CHHHHHHHHHHTC------SC---EE---ECCTTSC
T ss_pred CCCeEEEeCCCcCH----HHHHHHHc-C----CeEEEEeC----CHHHHHHHHhhcC------CC---EE---ECcHHHC
Confidence 45589999999886 45556655 2 48999984 2344433322211 11 22 2233333
Q ss_pred CccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEE
Q 008153 385 EPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIV 435 (576)
Q Consensus 385 ~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlv 435 (576)
. ...+ ..=+|-|...++|+... ...+|+.+ +-|+|.-.+++
T Consensus 109 ~-----~~~~--~fD~v~~~~~~~~~~~~---~~~~l~~~~~~LkpgG~l~~ 150 (260)
T 2avn_A 109 P-----FPSG--AFEAVLALGDVLSYVEN---KDKAFSEIRRVLVPDGLLIA 150 (260)
T ss_dssp C-----SCTT--CEEEEEECSSHHHHCSC---HHHHHHHHHHHEEEEEEEEE
T ss_pred C-----CCCC--CEEEEEEcchhhhcccc---HHHHHHHHHHHcCCCeEEEE
Confidence 2 2111 22223333335555432 55666655 67899866665
No 126
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=34.25 E-value=4.2e+02 Score=27.61 Aligned_cols=102 Identities=18% Similarity=0.136 Sum_probs=57.1
Q ss_pred eeEEEecccCCC----cchHHHHHHHhcCCC------CCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCc--eeEE
Q 008153 306 RVHVIDFSLKQG----MQWPALMQALALRPG------GPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGV--EFEF 373 (576)
Q Consensus 306 ~VHIIDf~I~~G----~QWpsLiqaLA~Rpg------GPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgV--pFeF 373 (576)
.+.|.|||.+.| .-+-.+|+++..+.. .+|.+.+..-+.|..+.....+.+-.-...+.+..|- +=-|
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 899999999999 456677888877643 2689999999988765433332222211122233332 1122
Q ss_pred eeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCC
Q 008153 374 RGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARP 414 (576)
Q Consensus 374 ~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~ 414 (576)
-.-+..+ +-...+ | ++..=+|.+...||-|...|
T Consensus 133 ~~gvpgS---Fy~rlf---p-~~S~d~v~Ss~aLHWls~~p 166 (384)
T 2efj_A 133 IGAMPGS---FYSRLF---P-EESMHFLHSCYCLHWLSQVP 166 (384)
T ss_dssp EEECCSC---TTSCCS---C-TTCEEEEEEESCTTBCSSSC
T ss_pred EEecchh---hhhccC---C-CCceEEEEecceeeecCCCc
Confidence 2112222 221111 2 34677888888999887644
No 127
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=33.74 E-value=2.1e+02 Score=28.70 Aligned_cols=111 Identities=14% Similarity=0.104 Sum_probs=60.6
Q ss_pred HHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCc--eeE
Q 008153 295 QAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGV--EFE 372 (576)
Q Consensus 295 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgV--pFe 372 (576)
++|++.+.-.+.-.|+|+|-|.|. +...++.+ | .-+++||+.. . .++...+++ +..|+ ..+
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGtG~----ls~~la~~-g---~~~v~gvD~s----~-~~~~a~~~~----~~~~~~~~i~ 116 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGTGI----LSMFAAKA-G---AKKVLGVDQS----E-ILYQAMDII----RLNKLEDTIT 116 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTTSH----HHHHHHHT-T---CSEEEEEESS----T-HHHHHHHHH----HHTTCTTTEE
T ss_pred HHHHhhhhhcCCCEEEEeeccCcH----HHHHHHHc-C---CCEEEEEChH----H-HHHHHHHHH----HHcCCCCcEE
Confidence 566666554455589999999985 44556655 2 2589999953 2 344433333 33333 234
Q ss_pred EeeeecCCCCCCCccccccCCCCCceEEEEeh-hhhhhccCCCChHHHHHHHH-HhcCCcEEEE
Q 008153 373 FRGFVCNSLADLEPDMLDIRPPEVETVAVNSV-FELHRLLARPGGIEKVVSSI-KAMRPKIITI 434 (576)
Q Consensus 373 F~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~-~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtl 434 (576)
|.. ...+++. +..+.-.+++.|.+ +.+++ ...++.+|..+ |-|+|.-+++
T Consensus 117 ~~~---~d~~~~~-----~~~~~~D~Ivs~~~~~~l~~----~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 117 LIK---GKIEEVH-----LPVEKVDVIISEWMGYFLLF----ESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EEE---SCTTTSC-----CSCSCEEEEEECCCBTTBTT----TCHHHHHHHHHHHHEEEEEEEE
T ss_pred EEE---eeHHHhc-----CCCCcEEEEEEcCchhhccC----HHHHHHHHHHHHhhcCCCcEEE
Confidence 432 2333332 11111145555543 22322 24567788776 6789987776
No 128
>2ksn_A Ubiquitin domain-containing protein 2; UBTD2, DC-UBP, signaling protein; NMR {Homo sapiens}
Probab=33.73 E-value=47 Score=30.26 Aligned_cols=38 Identities=16% Similarity=0.291 Sum_probs=31.5
Q ss_pred CCcHHHHHHHHHHHHhhCCHHHHHHHHHHHchhccCCCC
Q 008153 203 GVQLVHTLMACAEAIQQENLKVADALVKHIGLLAAAQAG 241 (576)
Q Consensus 203 g~~Lv~LLlaCAeAV~~gd~~~A~~lL~~i~~las~~g~ 241 (576)
.-.+-+.|-+|+++++.||++.|+.||..-. +..|.|+
T Consensus 55 r~EIW~ALraA~~~~e~~Dl~tAQ~IldaAg-Itvp~gd 92 (137)
T 2ksn_A 55 RKEIWDALKAAAHAFESNDHELAQAIIDGAN-ITLPHGA 92 (137)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHS-CBCSSCC
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHcC-CcccCCc
Confidence 3457789999999999999999999998665 5567776
No 129
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=32.90 E-value=1.9e+02 Score=28.49 Aligned_cols=136 Identities=12% Similarity=-0.003 Sum_probs=68.8
Q ss_pred eEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHc-CceeEEeeeecCCCCCCC
Q 008153 307 VHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTI-GVEFEFRGFVCNSLADLE 385 (576)
Q Consensus 307 VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~sl-gVpFeF~~v~~~~ledl~ 385 (576)
-+|+|+|.|.|. +...|+.+. |.-++|+|+. +...++...+++.+++..+ +-.+++.. ....+.
T Consensus 92 ~~VLdiG~G~G~----~~~~l~~~~---~~~~v~~vDi----d~~~~~~a~~~~~~~~~~~~~~~v~~~~---~D~~~~- 156 (296)
T 1inl_A 92 KKVLIIGGGDGG----TLREVLKHD---SVEKAILCEV----DGLVIEAARKYLKQTSCGFDDPRAEIVI---ANGAEY- 156 (296)
T ss_dssp CEEEEEECTTCH----HHHHHTTST---TCSEEEEEES----CHHHHHHHHHHCHHHHGGGGCTTEEEEE---SCHHHH-
T ss_pred CEEEEEcCCcCH----HHHHHHhcC---CCCEEEEEEC----CHHHHHHHHHHhHhhccccCCCceEEEE---CcHHHH-
Confidence 479999999886 566666653 3479999984 3556666666665544333 12233332 111110
Q ss_pred ccccccCCCCCceEEEEehhh-hhhccCCCChHHHHHHHH-HhcCCcEEEEEecCCCCCCchhHHHHHHHHHHHHHHhhh
Q 008153 386 PDMLDIRPPEVETVAVNSVFE-LHRLLARPGGIEKVVSSI-KAMRPKIITIVEQEANHNSPVFLDRFTEALHYYSSLFDS 463 (576)
Q Consensus 386 ~~~L~lr~~~~EaLaVN~~~~-Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlvEqeanhNsp~F~~RF~EAL~yYsalFDS 463 (576)
+....+.-..+++|.... .+.. .. -....+++.+ +.|+|.-+++++...-.. -.+.+.+.+......|..
T Consensus 157 ---l~~~~~~fD~Ii~d~~~~~~~~~-~~-l~~~~~l~~~~~~LkpgG~lv~~~~~~~~---~~~~~~~~~~~l~~~F~~ 228 (296)
T 1inl_A 157 ---VRKFKNEFDVIIIDSTDPTAGQG-GH-LFTEEFYQACYDALKEDGVFSAETEDPFY---DIGWFKLAYRRISKVFPI 228 (296)
T ss_dssp ---GGGCSSCEEEEEEEC------------CCSHHHHHHHHHHEEEEEEEEEECCCTTT---THHHHHHHHHHHHHHCSE
T ss_pred ---HhhCCCCceEEEEcCCCcccCch-hh-hhHHHHHHHHHHhcCCCcEEEEEccCccc---CHHHHHHHHHHHHHHCCc
Confidence 000011124777765422 1100 00 0124566654 678999888886332111 234555555556666665
Q ss_pred hh
Q 008153 464 LE 465 (576)
Q Consensus 464 Le 465 (576)
..
T Consensus 229 v~ 230 (296)
T 1inl_A 229 TR 230 (296)
T ss_dssp EE
T ss_pred eE
Confidence 44
No 130
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=32.88 E-value=57 Score=35.54 Aligned_cols=83 Identities=19% Similarity=0.260 Sum_probs=49.2
Q ss_pred CeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcC-ceeEEeeeecCCCCC
Q 008153 305 NRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIG-VEFEFRGFVCNSLAD 383 (576)
Q Consensus 305 ~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slg-VpFeF~~v~~~~led 383 (576)
+-+.|+|.|.|-|. |-..||.+ | -++|||+. ....++. .+ ..|+.-| +..+|+.. +.++
T Consensus 66 ~~~~vLDvGCG~G~----~~~~la~~-g----a~V~giD~----~~~~i~~-a~---~~a~~~~~~~~~~~~~---~~~~ 125 (569)
T 4azs_A 66 RPLNVLDLGCAQGF----FSLSLASK-G----ATIVGIDF----QQENINV-CR---ALAEENPDFAAEFRVG---RIEE 125 (569)
T ss_dssp SCCEEEEETCTTSH----HHHHHHHT-T----CEEEEEES----CHHHHHH-HH---HHHHTSTTSEEEEEEC---CHHH
T ss_pred CCCeEEEECCCCcH----HHHHHHhC-C----CEEEEECC----CHHHHHH-HH---HHHHhcCCCceEEEEC---CHHH
Confidence 45789999999986 77778876 3 37999994 2334432 22 2344444 56677743 3444
Q ss_pred CCccccccCCCCCceEEEEehhhhhhccC
Q 008153 384 LEPDMLDIRPPEVETVAVNSVFELHRLLA 412 (576)
Q Consensus 384 l~~~~L~lr~~~~EaLaVN~~~~Lh~L~~ 412 (576)
+... ..+ +..=+|-|+--|||+.+
T Consensus 126 ~~~~---~~~--~~fD~v~~~e~~ehv~~ 149 (569)
T 4azs_A 126 VIAA---LEE--GEFDLAIGLSVFHHIVH 149 (569)
T ss_dssp HHHH---CCT--TSCSEEEEESCHHHHHH
T ss_pred Hhhh---ccC--CCccEEEECcchhcCCC
Confidence 4211 111 13436666777899875
No 131
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=31.04 E-value=1.5e+02 Score=27.77 Aligned_cols=115 Identities=15% Similarity=0.154 Sum_probs=57.8
Q ss_pred HHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCce-eEEee
Q 008153 297 ILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVE-FEFRG 375 (576)
Q Consensus 297 ILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVp-FeF~~ 375 (576)
+++.+. ...=+|+|+|.|.|. +...||.+. |..++|||+... ..+-+...+..+-++..|++ .+|..
T Consensus 17 ~~~~~~-~~~~~vLDiGCG~G~----~~~~la~~~---~~~~v~GvD~s~----~~ml~~A~~A~~~~~~~~~~~v~~~~ 84 (225)
T 3p2e_A 17 LTEIIG-QFDRVHIDLGTGDGR----NIYKLAIND---QNTFYIGIDPVK----ENLFDISKKIIKKPSKGGLSNVVFVI 84 (225)
T ss_dssp HHHHHT-TCSEEEEEETCTTSH----HHHHHHHTC---TTEEEEEECSCC----GGGHHHHHHHTSCGGGTCCSSEEEEC
T ss_pred HHHHhC-CCCCEEEEEeccCcH----HHHHHHHhC---CCCEEEEEeCCH----HHHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 344333 334479999999884 566666542 458999999531 22212222222333445553 55543
Q ss_pred eecCCCCCCCccccccCCCCCceEEEEehhhhhh----ccCCCChHHHHHHHH-HhcCCcEEEEE
Q 008153 376 FVCNSLADLEPDMLDIRPPEVETVAVNSVFELHR----LLARPGGIEKVVSSI-KAMRPKIITIV 435 (576)
Q Consensus 376 v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~----L~~~~~~~d~vL~~I-r~L~PkIvtlv 435 (576)
...+++. ..+ .+-+..|.+.|..+. .... ...+|+.+ |-|+|.-.+++
T Consensus 85 ---~d~~~l~-~~~-----~d~v~~i~~~~~~~~~~~~~~~~---~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 85 ---AAAESLP-FEL-----KNIADSISILFPWGTLLEYVIKP---NRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp ---CBTTBCC-GGG-----TTCEEEEEEESCCHHHHHHHHTT---CHHHHHHHHTTEEEEEEEEE
T ss_pred ---cCHHHhh-hhc-----cCeEEEEEEeCCCcHHhhhhhcc---hHHHHHHHHHhcCCCcEEEE
Confidence 2344442 111 123444444443222 2111 13455554 67899877766
No 132
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=31.00 E-value=1.5e+02 Score=29.54 Aligned_cols=113 Identities=16% Similarity=0.159 Sum_probs=58.9
Q ss_pred HHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCce--eE
Q 008153 295 QAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVE--FE 372 (576)
Q Consensus 295 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVp--Fe 372 (576)
++|++.+.-.+.-+|+|+|-|.|. |...++.+ | .-+++||+.. ..++...++ ++..|+. .+
T Consensus 28 ~ai~~~~~~~~~~~VLDiGcGtG~----ls~~la~~-g---~~~v~~vD~s-----~~~~~a~~~----~~~~~~~~~i~ 90 (328)
T 1g6q_1 28 NAIIQNKDLFKDKIVLDVGCGTGI----LSMFAAKH-G---AKHVIGVDMS-----SIIEMAKEL----VELNGFSDKIT 90 (328)
T ss_dssp HHHHHHHHHHTTCEEEEETCTTSH----HHHHHHHT-C---CSEEEEEESS-----THHHHHHHH----HHHTTCTTTEE
T ss_pred HHHHhhHhhcCCCEEEEecCccHH----HHHHHHHC-C---CCEEEEEChH-----HHHHHHHHH----HHHcCCCCCEE
Confidence 345554443344589999999995 34455554 2 2489999853 234333333 3334442 34
Q ss_pred EeeeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEE
Q 008153 373 FRGFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIV 435 (576)
Q Consensus 373 F~~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlv 435 (576)
|.. ...+++. +..+.-..++.+.+ .+.+.. ...++.+|..+ +-|+|.-+++.
T Consensus 91 ~~~---~d~~~~~-----~~~~~~D~Ivs~~~--~~~l~~-~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 91 LLR---GKLEDVH-----LPFPKVDIIISEWM--GYFLLY-ESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp EEE---SCTTTSC-----CSSSCEEEEEECCC--BTTBST-TCCHHHHHHHHHHHEEEEEEEES
T ss_pred EEE---Cchhhcc-----CCCCcccEEEEeCc--hhhccc-HHHHHHHHHHHHhhcCCCeEEEE
Confidence 432 2344432 11111134444433 233332 24567777766 67899877763
No 133
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=29.83 E-value=1.5e+02 Score=27.47 Aligned_cols=47 Identities=11% Similarity=-0.064 Sum_probs=28.7
Q ss_pred ccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHH
Q 008153 302 NNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKL 360 (576)
Q Consensus 302 ~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL 360 (576)
...+.-.|+|+|.|.|.- ...|+.+ ++ -++|||+. +...++...+++
T Consensus 53 ~~~~~~~vLDlGcG~G~~----~~~l~~~--~~--~~v~gvD~----s~~~l~~a~~~~ 99 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIY----QLLSACE--SF--TEIIVSDY----TDQNLWELQKWL 99 (265)
T ss_dssp SSCCEEEEEEESCTTCCG----GGTTGGG--TE--EEEEEEES----CHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCccHH----HHHHhhc--cc--CeEEEecC----CHHHHHHHHHHH
Confidence 335667899999998852 2223332 22 58999984 345555554444
No 134
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=29.67 E-value=1.5e+02 Score=29.38 Aligned_cols=136 Identities=12% Similarity=0.079 Sum_probs=68.6
Q ss_pred eEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHc-CceeEEeeeecCCCCCCC
Q 008153 307 VHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTI-GVEFEFRGFVCNSLADLE 385 (576)
Q Consensus 307 VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~sl-gVpFeF~~v~~~~ledl~ 385 (576)
-+|+|+|.|.|. +...|+.+ +|.-+||+|+. +...++...+++...+..+ +-.+++.. ....+.
T Consensus 97 ~~VLdiG~G~G~----~~~~l~~~---~~~~~v~~vDi----d~~~i~~ar~~~~~~~~~~~~~rv~v~~---~Da~~~- 161 (304)
T 2o07_A 97 RKVLIIGGGDGG----VLREVVKH---PSVESVVQCEI----DEDVIQVSKKFLPGMAIGYSSSKLTLHV---GDGFEF- 161 (304)
T ss_dssp CEEEEEECTTSH----HHHHHTTC---TTCCEEEEEES----CHHHHHHHHHHCHHHHGGGGCTTEEEEE---SCHHHH-
T ss_pred CEEEEECCCchH----HHHHHHHc---CCCCEEEEEEC----CHHHHHHHHHHhHHhhcccCCCcEEEEE---CcHHHH-
Confidence 479999999886 55667765 34579999984 3556665555555543333 22233331 111110
Q ss_pred ccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEEecCCCCCCchhHHHHHHHHHHHHHHhhhh
Q 008153 386 PDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIVEQEANHNSPVFLDRFTEALHYYSSLFDSL 464 (576)
Q Consensus 386 ~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlvEqeanhNsp~F~~RF~EAL~yYsalFDSL 464 (576)
+....+.-..+++++...... ...-....+++.+ +.|+|.-+++++.......+. .+.+...+...+|...
T Consensus 162 ---l~~~~~~fD~Ii~d~~~~~~~--~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~---~~~~~~~~l~~~f~~v 233 (304)
T 2o07_A 162 ---MKQNQDAFDVIITDSSDPMGP--AESLFKESYYQLMKTALKEDGVLCCQGECQWLHLD---LIKEMRQFCQSLFPVV 233 (304)
T ss_dssp ---HHTCSSCEEEEEEECC-------------CHHHHHHHHHEEEEEEEEEEEECTTTCHH---HHHHHHHHHHHHCSEE
T ss_pred ---HhhCCCCceEEEECCCCCCCc--chhhhHHHHHHHHHhccCCCeEEEEecCCcccchH---HHHHHHHHHHHhCCCc
Confidence 000111125777776532210 0000123455554 778999998886654433332 3333444555667644
Q ss_pred h
Q 008153 465 E 465 (576)
Q Consensus 465 e 465 (576)
.
T Consensus 234 ~ 234 (304)
T 2o07_A 234 A 234 (304)
T ss_dssp E
T ss_pred e
Confidence 3
No 135
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=29.41 E-value=1.8e+02 Score=26.06 Aligned_cols=101 Identities=14% Similarity=0.149 Sum_probs=52.1
Q ss_pred HHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCee-eEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEe
Q 008153 296 AILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAF-RLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFR 374 (576)
Q Consensus 296 AILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~L-RITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~ 374 (576)
.+++.+.. +.-.|+|+|-|.|. +...| + . ++|||+. +...++...+++ -++ +|.
T Consensus 28 ~~l~~~~~-~~~~vLdiG~G~G~----~~~~l----~----~~~v~~vD~----s~~~~~~a~~~~------~~~--~~~ 82 (211)
T 2gs9_A 28 RALKGLLP-PGESLLEVGAGTGY----WLRRL----P----YPQKVGVEP----SEAMLAVGRRRA------PEA--TWV 82 (211)
T ss_dssp HHHHTTCC-CCSEEEEETCTTCH----HHHHC----C----CSEEEEECC----CHHHHHHHHHHC------TTS--EEE
T ss_pred HHHHHhcC-CCCeEEEECCCCCH----hHHhC----C----CCeEEEEeC----CHHHHHHHHHhC------CCc--EEE
Confidence 34555443 55689999999885 22233 1 3 8999984 234444333322 133 333
Q ss_pred eeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEE
Q 008153 375 GFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIV 435 (576)
Q Consensus 375 ~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlv 435 (576)
. ..++++. ...+ ..=+|-+...||++.+ ...+|+.+ +-|+|.-.+++
T Consensus 83 ~---~d~~~~~-----~~~~--~fD~v~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~i 130 (211)
T 2gs9_A 83 R---AWGEALP-----FPGE--SFDVVLLFTTLEFVED----VERVLLEARRVLRPGGALVV 130 (211)
T ss_dssp C---CCTTSCC-----SCSS--CEEEEEEESCTTTCSC----HHHHHHHHHHHEEEEEEEEE
T ss_pred E---cccccCC-----CCCC--cEEEEEEcChhhhcCC----HHHHHHHHHHHcCCCCEEEE
Confidence 2 2233322 2111 2223334456787742 45566554 67899865554
No 136
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=29.31 E-value=2.5e+02 Score=25.45 Aligned_cols=101 Identities=14% Similarity=0.192 Sum_probs=53.0
Q ss_pred CCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEeeeecCCCCC
Q 008153 304 ANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRGFVCNSLAD 383 (576)
Q Consensus 304 ~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~~v~~~~led 383 (576)
.+.-.|+|+|-|.|.-- ..|+.+ ++ ++|||+. +...++...+++ -+ .+|.. ..+.+
T Consensus 39 ~~~~~vLdiG~G~G~~~----~~l~~~--~~---~v~~~D~----s~~~~~~a~~~~------~~--~~~~~---~d~~~ 94 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHL----EHFTKE--FG---DTAGLEL----SEDMLTHARKRL------PD--ATLHQ---GDMRD 94 (239)
T ss_dssp TTCCEEEEETCTTSHHH----HHHHHH--HS---EEEEEES----CHHHHHHHHHHC------TT--CEEEE---CCTTT
T ss_pred CCCCeEEEecccCCHHH----HHHHHh--CC---cEEEEeC----CHHHHHHHHHhC------CC--CEEEE---CCHHH
Confidence 34568999999998633 334433 22 8999984 234443333221 12 33432 22333
Q ss_pred CCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEEe
Q 008153 384 LEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIVE 436 (576)
Q Consensus 384 l~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlvE 436 (576)
+. . ++ .=-+|+.+...+|++... .....+|+.+ +.|+|.-.++++
T Consensus 95 ~~-----~-~~-~~D~v~~~~~~~~~~~~~-~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 95 FR-----L-GR-KFSAVVSMFSSVGYLKTT-EELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp CC-----C-SS-CEEEEEECTTGGGGCCSH-HHHHHHHHHHHHTEEEEEEEEEC
T ss_pred cc-----c-CC-CCcEEEEcCchHhhcCCH-HHHHHHHHHHHHhcCCCeEEEEE
Confidence 22 1 11 012333333367877432 2355666665 678999888775
No 137
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=28.42 E-value=90 Score=28.13 Aligned_cols=67 Identities=13% Similarity=0.119 Sum_probs=39.1
Q ss_pred HHHHHHHHhhc--cCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCc
Q 008153 292 TANQAILEAFN--NANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGV 369 (576)
Q Consensus 292 tANqAILEA~~--g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgV 369 (576)
...+.+++.+. -.+.-.|+|+|.|.|. +...|+.+ +..++|||+. +...++...++ ++..++
T Consensus 45 ~~~~~~~~~l~~~~~~~~~vLDiG~G~G~----~~~~l~~~----~~~~v~~vD~----s~~~~~~a~~~----~~~~~~ 108 (205)
T 3grz_A 45 QTTQLAMLGIERAMVKPLTVADVGTGSGI----LAIAAHKL----GAKSVLATDI----SDESMTAAEEN----AALNGI 108 (205)
T ss_dssp HHHHHHHHHHHHHCSSCCEEEEETCTTSH----HHHHHHHT----TCSEEEEEES----CHHHHHHHHHH----HHHTTC
T ss_pred ccHHHHHHHHHHhccCCCEEEEECCCCCH----HHHHHHHC----CCCEEEEEEC----CHHHHHHHHHH----HHHcCC
Confidence 34455555554 2345689999999984 34446654 2358999984 34445444333 334455
Q ss_pred e-eEEe
Q 008153 370 E-FEFR 374 (576)
Q Consensus 370 p-FeF~ 374 (576)
+ ++|.
T Consensus 109 ~~v~~~ 114 (205)
T 3grz_A 109 YDIALQ 114 (205)
T ss_dssp CCCEEE
T ss_pred CceEEE
Confidence 4 5554
No 138
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=27.45 E-value=1.6e+02 Score=28.66 Aligned_cols=137 Identities=12% Similarity=0.054 Sum_probs=69.4
Q ss_pred eeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcC-ceeEEeeeecCCCCCC
Q 008153 306 RVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIG-VEFEFRGFVCNSLADL 384 (576)
Q Consensus 306 ~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slg-VpFeF~~v~~~~ledl 384 (576)
.-+|+|+|.|.|. +...++.+ +|.-++|+|+. +...++...+++.+++..++ -.+++.. . |.
T Consensus 76 ~~~VLdiG~G~G~----~~~~l~~~---~~~~~v~~vEi----d~~~v~~ar~~~~~~~~~~~~~rv~v~~--~----D~ 138 (275)
T 1iy9_A 76 PEHVLVVGGGDGG----VIREILKH---PSVKKATLVDI----DGKVIEYSKKFLPSIAGKLDDPRVDVQV--D----DG 138 (275)
T ss_dssp CCEEEEESCTTCH----HHHHHTTC---TTCSEEEEEES----CHHHHHHHHHHCHHHHTTTTSTTEEEEE--S----CS
T ss_pred CCEEEEECCchHH----HHHHHHhC---CCCceEEEEEC----CHHHHHHHHHHhHhhccccCCCceEEEE--C----cH
Confidence 4579999999885 56666665 34578999984 34566655555555433231 1233331 1 11
Q ss_pred CccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHH-HHhcCCcEEEEEecCCCCCCchhHHHHHHHHHHHHHHhhh
Q 008153 385 EPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSS-IKAMRPKIITIVEQEANHNSPVFLDRFTEALHYYSSLFDS 463 (576)
Q Consensus 385 ~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~-Ir~L~PkIvtlvEqeanhNsp~F~~RF~EAL~yYsalFDS 463 (576)
... +.-..+.-.+++++... +.-....-....+++. .+.|+|.-++++........ .+.+.+.+.....+|..
T Consensus 139 ~~~-l~~~~~~fD~Ii~d~~~--~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~---~~~~~~~~~~l~~~F~~ 212 (275)
T 1iy9_A 139 FMH-IAKSENQYDVIMVDSTE--PVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFT---PELITNVQRDVKEIFPI 212 (275)
T ss_dssp HHH-HHTCCSCEEEEEESCSS--CCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTC---HHHHHHHHHHHHTTCSE
T ss_pred HHH-HhhCCCCeeEEEECCCC--CCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccc---HHHHHHHHHHHHHhCCC
Confidence 100 10001112466666543 2111100012345554 47899998888864321111 44555555555556654
Q ss_pred hh
Q 008153 464 LE 465 (576)
Q Consensus 464 Le 465 (576)
..
T Consensus 213 v~ 214 (275)
T 1iy9_A 213 TK 214 (275)
T ss_dssp EE
T ss_pred eE
Confidence 43
No 139
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=27.04 E-value=1.1e+02 Score=26.53 Aligned_cols=52 Identities=21% Similarity=0.190 Sum_probs=32.4
Q ss_pred HHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHH
Q 008153 296 AILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKL 360 (576)
Q Consensus 296 AILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL 360 (576)
.+++.+.-...-+|+|+|-|.|. +...|+.+- .++|||+. +...++...+++
T Consensus 24 ~~~~~~~~~~~~~vldiG~G~G~----~~~~l~~~~-----~~v~~~D~----~~~~~~~a~~~~ 75 (192)
T 1l3i_A 24 LIMCLAEPGKNDVAVDVGCGTGG----VTLELAGRV-----RRVYAIDR----NPEAISTTEMNL 75 (192)
T ss_dssp HHHHHHCCCTTCEEEEESCTTSH----HHHHHHTTS-----SEEEEEES----CHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCEEEEECCCCCH----HHHHHHHhc-----CEEEEEEC----CHHHHHHHHHHH
Confidence 34555554555689999998885 444455442 58999984 345555444444
No 140
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=26.96 E-value=1.1e+02 Score=30.05 Aligned_cols=133 Identities=11% Similarity=0.101 Sum_probs=65.0
Q ss_pred eEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHc-CceeEEeeeecCCCCCCC
Q 008153 307 VHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTI-GVEFEFRGFVCNSLADLE 385 (576)
Q Consensus 307 VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~sl-gVpFeF~~v~~~~ledl~ 385 (576)
-+|+|+|.|.|. +...++.+ +|..++|+|+. +...++...+++..++..+ +-.++|.. . |..
T Consensus 80 ~~VLdiG~G~G~----~~~~l~~~---~~~~~v~~vDi----d~~~i~~a~~~~~~~~~~~~~~~v~~~~---~---D~~ 142 (283)
T 2i7c_A 80 KNVLVVGGGDGG----IIRELCKY---KSVENIDICEI----DETVIEVSKIYFKNISCGYEDKRVNVFI---E---DAS 142 (283)
T ss_dssp CEEEEEECTTSH----HHHHHTTC---TTCCEEEEEES----CHHHHHHHHHHCTTTSGGGGSTTEEEEE---S---CHH
T ss_pred CeEEEEeCCcCH----HHHHHHHc---CCCCEEEEEEC----CHHHHHHHHHHhHHhccccCCCcEEEEE---C---ChH
Confidence 489999999886 66667655 34579999984 3444544444433222111 11233331 1 111
Q ss_pred ccccccCCCCCceEEEEehhhhhhccCCCChH--HHHHHHH-HhcCCcEEEEEecCCCCCCchhHHHHHHHHHHHHHHhh
Q 008153 386 PDMLDIRPPEVETVAVNSVFELHRLLARPGGI--EKVVSSI-KAMRPKIITIVEQEANHNSPVFLDRFTEALHYYSSLFD 462 (576)
Q Consensus 386 ~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~--d~vL~~I-r~L~PkIvtlvEqeanhNsp~F~~RF~EAL~yYsalFD 462 (576)
.. +.-..+.-.++++++....+. . ..+ ..+++.+ +.|+|.-++++........+ +.+.+.+......|.
T Consensus 143 ~~-l~~~~~~fD~Ii~d~~~~~~~--~--~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~---~~~~~~~~~l~~~F~ 214 (283)
T 2i7c_A 143 KF-LENVTNTYDVIIVDSSDPIGP--A--ETLFNQNFYEKIYNALKPNGYCVAQCESLWIHV---GTIKNMIGYAKKLFK 214 (283)
T ss_dssp HH-HHHCCSCEEEEEEECCCTTTG--G--GGGSSHHHHHHHHHHEEEEEEEEEECCCTTTCH---HHHHHHHHHHHTTCS
T ss_pred HH-HHhCCCCceEEEEcCCCCCCc--c--hhhhHHHHHHHHHHhcCCCcEEEEECCCcccCH---HHHHHHHHHHHHHCC
Confidence 00 000011224777765432211 1 111 5677665 67899988887544322222 233333333444454
Q ss_pred hh
Q 008153 463 SL 464 (576)
Q Consensus 463 SL 464 (576)
..
T Consensus 215 ~v 216 (283)
T 2i7c_A 215 KV 216 (283)
T ss_dssp EE
T ss_pred ce
Confidence 43
No 141
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=26.77 E-value=2.8e+02 Score=29.39 Aligned_cols=118 Identities=14% Similarity=0.057 Sum_probs=60.3
Q ss_pred HHHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHH---HHHHHHHHhHcCc--
Q 008153 295 QAILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQV---GWKLAQLADTIGV-- 369 (576)
Q Consensus 295 qAILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~et---G~rL~~fA~slgV-- 369 (576)
..|++.+.-...-.|+|+|.|.|.+-..|.+.. +..+++||+.. ...++.. -..+.+-++..|+
T Consensus 232 ~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~-------g~~~V~GVDis----~~~l~~A~~Ml~~ar~~~~~~Gl~~ 300 (433)
T 1u2z_A 232 SDVYQQCQLKKGDTFMDLGSGVGNCVVQAALEC-------GCALSFGCEIM----DDASDLTILQYEELKKRCKLYGMRL 300 (433)
T ss_dssp HHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHH-------CCSEEEEEECC----HHHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred HHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHC-------CCCEEEEEeCC----HHHHHHHHHhHHHHHHHHHHcCCCC
Confidence 456777665555679999999997555444332 22489999842 3333333 1222333445564
Q ss_pred -eeEEeeeecCCCCCCCcccc--ccCCCCCceEEEEehhhhhhccCCCChHHHHHHHHHhcCCcEEEEE
Q 008153 370 -EFEFRGFVCNSLADLEPDML--DIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSIKAMRPKIITIV 435 (576)
Q Consensus 370 -pFeF~~v~~~~ledl~~~~L--~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~Ir~L~PkIvtlv 435 (576)
.++|. ....+.+ ...+ ...+ -.++++|..+.. +.....+-...+.|+|.-.+++
T Consensus 301 ~nV~~i--~gD~~~~--~~~~~~~~~~--FDvIvvn~~l~~------~d~~~~L~el~r~LKpGG~lVi 357 (433)
T 1u2z_A 301 NNVEFS--LKKSFVD--NNRVAELIPQ--CDVILVNNFLFD------EDLNKKVEKILQTAKVGCKIIS 357 (433)
T ss_dssp CCEEEE--ESSCSTT--CHHHHHHGGG--CSEEEECCTTCC------HHHHHHHHHHHTTCCTTCEEEE
T ss_pred CceEEE--EcCcccc--ccccccccCC--CCEEEEeCcccc------ccHHHHHHHHHHhCCCCeEEEE
Confidence 24443 1112211 1111 0111 147777754311 1122333455688999877665
No 142
>2j66_A BTRK, decarboxylase; butirosin, AHBA biosynthesis, lyase; HET: PLP; 1.65A {Bacillus circulans}
Probab=26.65 E-value=2.4e+02 Score=29.10 Aligned_cols=66 Identities=24% Similarity=0.216 Sum_probs=41.6
Q ss_pred CeeEE-Eeccc--------------CCCc---chHHHHHHHhcCCCCCCeeeEeecCCCC-C--CChHHHHHHHHHHHHH
Q 008153 305 NRVHV-IDFSL--------------KQGM---QWPALMQALALRPGGPPAFRLTGIGPPQ-P--DNTDALQQVGWKLAQL 363 (576)
Q Consensus 305 ~~VHI-IDf~I--------------~~G~---QWpsLiqaLA~RpgGPP~LRITgI~~p~-~--~~~~~L~etG~rL~~f 363 (576)
-+||| ||-|+ .+|+ ++..+++.++.. |.|+|.||..-. + ...+...+.-+++.++
T Consensus 133 ~~V~lrvn~g~~~~~~~~~~~~~~srfG~~~~e~~~~~~~~~~~----~~l~l~Gl~~H~gs~~~~~~~~~~~~~~~~~~ 208 (428)
T 2j66_A 133 ARVAIRINPDKSFGSTAIKMGGVPRQFGMDESMLDAVMDAVRSL----QFTKFIGIHVYTGTQNLNTDSIIESMKYTVDL 208 (428)
T ss_dssp EEEEEEEECSSCC--CCCSSSCCCCSSSEEGGGHHHHHHHHHHC----TTEEEEEEECCCCSCBCCHHHHHHHHHHHHHH
T ss_pred ceEEEEEcCCCCCCCCccccCCCCCCCCCCHHHHHHHHHHHHhC----CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH
Confidence 47888 88876 5776 677788877654 459999996431 1 2234444445556555
Q ss_pred HhH----cCceeEEe
Q 008153 364 ADT----IGVEFEFR 374 (576)
Q Consensus 364 A~s----lgVpFeF~ 374 (576)
++. .|+++++-
T Consensus 209 ~~~l~~~~g~~~~~l 223 (428)
T 2j66_A 209 GRNIYERYGIVCECI 223 (428)
T ss_dssp HHHHHHHHCCCCSEE
T ss_pred HHHHHHHhCCCCCEE
Confidence 544 47766654
No 143
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=26.29 E-value=1.6e+02 Score=25.99 Aligned_cols=28 Identities=18% Similarity=0.292 Sum_probs=21.8
Q ss_pred eEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCC
Q 008153 307 VHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGP 344 (576)
Q Consensus 307 VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~ 344 (576)
-.|+|+|.|.|. +...|+.+- ++|||+.
T Consensus 25 ~~vLD~GcG~G~----~~~~l~~~~------~v~gvD~ 52 (170)
T 3q87_B 25 KIVLDLGTSTGV----ITEQLRKRN------TVVSTDL 52 (170)
T ss_dssp CEEEEETCTTCH----HHHHHTTTS------EEEEEES
T ss_pred CeEEEeccCccH----HHHHHHhcC------cEEEEEC
Confidence 389999999985 556666653 9999984
No 144
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=25.30 E-value=1.2e+02 Score=27.36 Aligned_cols=56 Identities=9% Similarity=0.068 Sum_probs=34.7
Q ss_pred HHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHH
Q 008153 296 AILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLA 361 (576)
Q Consensus 296 AILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~ 361 (576)
.+++.+.-...-+|+|+|-|.|.--..|.+.. .|..++|+|+. +...++...+++.
T Consensus 68 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~------~~~~~v~~vD~----~~~~~~~a~~~~~ 123 (215)
T 2yxe_A 68 MMCELLDLKPGMKVLEIGTGCGYHAAVTAEIV------GEDGLVVSIER----IPELAEKAERTLR 123 (215)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH------CTTSEEEEEES----CHHHHHHHHHHHH
T ss_pred HHHHhhCCCCCCEEEEECCCccHHHHHHHHHh------CCCCEEEEEeC----CHHHHHHHHHHHH
Confidence 45555554555689999999887555554443 23458999984 3455555444443
No 145
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=24.96 E-value=1.1e+02 Score=30.82 Aligned_cols=134 Identities=10% Similarity=0.039 Sum_probs=65.3
Q ss_pred eEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHc-CceeEEeeeecCCCCCCC
Q 008153 307 VHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTI-GVEFEFRGFVCNSLADLE 385 (576)
Q Consensus 307 VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~sl-gVpFeF~~v~~~~ledl~ 385 (576)
-+|+|+|.|.|. +...|+.+ +|.-+||+|+. +...++...+++.+++..+ +-.++|.. . |..
T Consensus 110 ~~VLdIG~G~G~----~~~~l~~~---~~~~~v~~vDi----d~~~i~~Ar~~~~~~~~~~~~~rv~~~~---~---D~~ 172 (314)
T 2b2c_A 110 KRVLIIGGGDGG----ILREVLKH---ESVEKVTMCEI----DEMVIDVAKKFLPGMSCGFSHPKLDLFC---G---DGF 172 (314)
T ss_dssp CEEEEESCTTSH----HHHHHTTC---TTCCEEEEECS----CHHHHHHHHHHCTTTSGGGGCTTEEEEC---S---CHH
T ss_pred CEEEEEcCCcCH----HHHHHHHc---CCCCEEEEEEC----CHHHHHHHHHHHHHhccccCCCCEEEEE---C---hHH
Confidence 479999999886 55666655 35579999984 3445544444443221111 11233331 1 111
Q ss_pred ccccccCCCCCceEEEEehhhhhhccCCCChH-HHHHHHH-HhcCCcEEEEEecCCCCCCchhHHHHHHHHHHHHHHhhh
Q 008153 386 PDMLDIRPPEVETVAVNSVFELHRLLARPGGI-EKVVSSI-KAMRPKIITIVEQEANHNSPVFLDRFTEALHYYSSLFDS 463 (576)
Q Consensus 386 ~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~-d~vL~~I-r~L~PkIvtlvEqeanhNsp~F~~RF~EAL~yYsalFDS 463 (576)
.. +.-..+.-.++++|.... +.....-. ..+++.+ +.|+|.-+++++.+.-.. -.+.+.....+...+|..
T Consensus 173 ~~-l~~~~~~fD~Ii~d~~~~---~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~---~~~~~~~~~~~l~~vF~~ 245 (314)
T 2b2c_A 173 EF-LKNHKNEFDVIITDSSDP---VGPAESLFGQSYYELLRDALKEDGILSSQGESVWL---HLPLIAHLVAFNRKIFPA 245 (314)
T ss_dssp HH-HHHCTTCEEEEEECCC----------------HHHHHHHHEEEEEEEEEECCCTTT---CHHHHHHHHHHHHHHCSE
T ss_pred HH-HHhcCCCceEEEEcCCCC---CCcchhhhHHHHHHHHHhhcCCCeEEEEECCCccc---CHHHHHHHHHHHHHHCCc
Confidence 00 100111124677765321 11111111 4566554 778999888886432221 134455566666677764
Q ss_pred h
Q 008153 464 L 464 (576)
Q Consensus 464 L 464 (576)
.
T Consensus 246 v 246 (314)
T 2b2c_A 246 V 246 (314)
T ss_dssp E
T ss_pred c
Confidence 4
No 146
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=24.94 E-value=66 Score=30.80 Aligned_cols=52 Identities=15% Similarity=0.223 Sum_probs=42.9
Q ss_pred hHHHHHHHHHhcCCcEEEEEecCCCCCCchhHHHHHHHHHHHHHHhhhhhcc
Q 008153 416 GIEKVVSSIKAMRPKIITIVEQEANHNSPVFLDRFTEALHYYSSLFDSLEGS 467 (576)
Q Consensus 416 ~~d~vL~~Ir~L~PkIvtlvEqeanhNsp~F~~RF~EAL~yYsalFDSLea~ 467 (576)
..+.+++.+++.+.+..+.+|.+.........+-+.+++.|...+++.|..|
T Consensus 239 d~~~~~~~L~~~gy~g~~~lE~~~~~~~~~~~~~~~~s~~~l~~l~~~~~~~ 290 (290)
T 3tva_A 239 GMEAYLTTLWEIGYRGPLTIEREIPHDPVQQKKDLASALELLTGLRKKIANC 290 (290)
T ss_dssp CHHHHHHHHHHTTCCSCEEECCCCTTSHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHcCCCCcEEEEEecCCChhhHHHHHHHHHHHHHHHHHHhcCC
Confidence 4789999999999998888998866433357889999999999999887654
No 147
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=24.89 E-value=51 Score=29.49 Aligned_cols=42 Identities=19% Similarity=0.327 Sum_probs=28.1
Q ss_pred HHHHhhcc-CCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCC
Q 008153 296 AILEAFNN-ANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGP 344 (576)
Q Consensus 296 AILEA~~g-~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~ 344 (576)
.+++.+.. .+.-+|+|+|.|.|. +...|+.+. |..++|||+.
T Consensus 20 ~~~~~l~~~~~~~~vLDiG~G~G~----~~~~l~~~~---~~~~v~~vD~ 62 (215)
T 4dzr_A 20 EAIRFLKRMPSGTRVIDVGTGSGC----IAVSIALAC---PGVSVTAVDL 62 (215)
T ss_dssp HHHHHHTTCCTTEEEEEEESSBCH----HHHHHHHHC---TTEEEEEEEC
T ss_pred HHHHHhhhcCCCCEEEEecCCHhH----HHHHHHHhC---CCCeEEEEEC
Confidence 34555544 567899999999996 333344331 4579999985
No 148
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=24.25 E-value=4.3e+02 Score=26.03 Aligned_cols=137 Identities=7% Similarity=0.044 Sum_probs=67.2
Q ss_pred eeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhH-c-CceeEEeeeecCCCCC
Q 008153 306 RVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADT-I-GVEFEFRGFVCNSLAD 383 (576)
Q Consensus 306 ~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~s-l-gVpFeF~~v~~~~led 383 (576)
.-+|+|+|.|.|. +...|+.+ +|.-+||+|+.. ...++...+++...... + +-.++|.. .+-.+-
T Consensus 84 ~~~VLdiG~G~G~----~~~~l~~~---~~~~~V~~VDid----~~vi~~ar~~~~~~~~~~~~~~rv~~~~--~D~~~~ 150 (294)
T 3adn_A 84 AKHVLIIGGGDGA----MLREVTRH---KNVESITMVEID----AGVVSFCRQYLPNHNAGSYDDPRFKLVI--DDGVNF 150 (294)
T ss_dssp CCEEEEESCTTCH----HHHHHHTC---TTCCEEEEECSC----TTHHHHHHHHCHHHHSSCTTCTTCCEEC--SCSCC-
T ss_pred CCEEEEEeCChhH----HHHHHHhC---CCCCEEEEEECC----HHHHHHHHHhhhhcccccccCCceEEEE--ChHHHH
Confidence 3489999999886 55666665 345799999843 34555555555443211 1 11233321 111111
Q ss_pred CCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEEecCCCCCCchhHHHHHHHHHHHHHHhh
Q 008153 384 LEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIVEQEANHNSPVFLDRFTEALHYYSSLFD 462 (576)
Q Consensus 384 l~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlvEqeanhNsp~F~~RF~EAL~yYsalFD 462 (576)
+.. ..+.-.++++++.... ..+..-....|++.+ +.|+|.-++++.-++....+ +.+.+.+......|.
T Consensus 151 l~~-----~~~~fDvIi~D~~~p~--~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~---~~~~~~~~~l~~~F~ 220 (294)
T 3adn_A 151 VNQ-----TSQTFDVIISDCTDPI--GPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQ---EEAIDSHRKLSHYFS 220 (294)
T ss_dssp --C-----CCCCEEEEEECC------------CCHHHHHHHHHTEEEEEEEEEEEEECSSCC---HHHHHHHHHHHHHCS
T ss_pred Hhh-----cCCCccEEEECCCCcc--CcchhccHHHHHHHHHHhcCCCCEEEEecCCcccch---HHHHHHHHHHHHHCC
Confidence 110 1112247777654211 111000014566554 77899988887554333333 344555555566676
Q ss_pred hhh
Q 008153 463 SLE 465 (576)
Q Consensus 463 SLe 465 (576)
...
T Consensus 221 ~v~ 223 (294)
T 3adn_A 221 DVG 223 (294)
T ss_dssp EEE
T ss_pred CeE
Confidence 554
No 149
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=24.03 E-value=1.3e+02 Score=30.19 Aligned_cols=134 Identities=10% Similarity=0.070 Sum_probs=67.0
Q ss_pred eEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHc-CceeEEeeeecCCCCCCC
Q 008153 307 VHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTI-GVEFEFRGFVCNSLADLE 385 (576)
Q Consensus 307 VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~sl-gVpFeF~~v~~~~ledl~ 385 (576)
-+|+|+|.|.|. +...++.+ +|..++|+|+. +...++...+++..++..+ +-.++|.. ....+.
T Consensus 118 ~~VLdiG~G~G~----~~~~l~~~---~~~~~v~~vDi----s~~~l~~ar~~~~~~~~~~~~~~v~~~~---~D~~~~- 182 (321)
T 2pt6_A 118 KNVLVVGGGDGG----IIRELCKY---KSVENIDICEI----DETVIEVSKIYFKNISCGYEDKRVNVFI---EDASKF- 182 (321)
T ss_dssp CEEEEEECTTCH----HHHHHTTC---TTCCEEEEEES----CHHHHHHHHHHCTTTSGGGGSTTEEEEE---SCHHHH-
T ss_pred CEEEEEcCCccH----HHHHHHHc---CCCCEEEEEEC----CHHHHHHHHHHHHhhccccCCCcEEEEE---ccHHHH-
Confidence 579999999886 56666665 34579999984 3455555544443321112 11233332 111110
Q ss_pred ccccccCCCCCceEEEEehhhhhhccCCCCh-HHHHHHHH-HhcCCcEEEEEecCCCCCCchhHHHHHHHHHHHHHHhhh
Q 008153 386 PDMLDIRPPEVETVAVNSVFELHRLLARPGG-IEKVVSSI-KAMRPKIITIVEQEANHNSPVFLDRFTEALHYYSSLFDS 463 (576)
Q Consensus 386 ~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~-~d~vL~~I-r~L~PkIvtlvEqeanhNsp~F~~RF~EAL~yYsalFDS 463 (576)
+.-.++.-.++++|.....+.- ... ...+++.+ +.|+|.-+++++.+.....+. .+.+.+......|..
T Consensus 183 ---l~~~~~~fDvIi~d~~~p~~~~---~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~---~~~~~~~~l~~~F~~ 253 (321)
T 2pt6_A 183 ---LENVTNTYDVIIVDSSDPIGPA---ETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVG---TIKNMIGYAKKLFKK 253 (321)
T ss_dssp ---HHHCCSCEEEEEEECCCSSSGG---GGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHH---HHHHHHHHHHTTCSE
T ss_pred ---HhhcCCCceEEEECCcCCCCcc---hhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHH---HHHHHHHHHHHHCCC
Confidence 0000111257777763222110 001 15666655 678999998887544333333 333333344444554
Q ss_pred h
Q 008153 464 L 464 (576)
Q Consensus 464 L 464 (576)
.
T Consensus 254 v 254 (321)
T 2pt6_A 254 V 254 (321)
T ss_dssp E
T ss_pred e
Confidence 4
No 150
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=23.13 E-value=3e+02 Score=24.61 Aligned_cols=105 Identities=10% Similarity=0.052 Sum_probs=56.1
Q ss_pred HHHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCce-eEEe
Q 008153 296 AILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVE-FEFR 374 (576)
Q Consensus 296 AILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVp-FeF~ 374 (576)
.+++.+.-...-+|+|+|-|.|..= ..|+.+ + -++|+|+. +...++...+++. ..|++ .+|.
T Consensus 68 ~~~~~l~~~~~~~vLdiG~G~G~~~----~~la~~-~----~~v~~vD~----~~~~~~~a~~~~~----~~~~~~v~~~ 130 (210)
T 3lbf_A 68 RMTELLELTPQSRVLEIGTGSGYQT----AILAHL-V----QHVCSVER----IKGLQWQARRRLK----NLDLHNVSTR 130 (210)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHH----HHHHHH-S----SEEEEEES----CHHHHHHHHHHHH----HTTCCSEEEE
T ss_pred HHHHhcCCCCCCEEEEEcCCCCHHH----HHHHHh-C----CEEEEEec----CHHHHHHHHHHHH----HcCCCceEEE
Confidence 3455665556678999999988633 334433 2 48999984 3455655555543 33443 3443
Q ss_pred eeecCCCCCCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHHHhcCCcEEEEEe
Q 008153 375 GFVCNSLADLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSIKAMRPKIITIVE 436 (576)
Q Consensus 375 ~v~~~~ledl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~Ir~L~PkIvtlvE 436 (576)
. ....+.... .+.-..++++ ..+|++.+ ...+.|+|.-.+++.
T Consensus 131 ~---~d~~~~~~~-----~~~~D~i~~~--~~~~~~~~---------~~~~~L~pgG~lv~~ 173 (210)
T 3lbf_A 131 H---GDGWQGWQA-----RAPFDAIIVT--AAPPEIPT---------ALMTQLDEGGILVLP 173 (210)
T ss_dssp E---SCGGGCCGG-----GCCEEEEEES--SBCSSCCT---------HHHHTEEEEEEEEEE
T ss_pred E---CCcccCCcc-----CCCccEEEEc--cchhhhhH---------HHHHhcccCcEEEEE
Confidence 2 122111110 1111355554 34566653 356788997665543
No 151
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=23.09 E-value=3.2e+02 Score=26.00 Aligned_cols=126 Identities=11% Similarity=0.050 Sum_probs=60.7
Q ss_pred HHHhhc-cCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCce--eEE
Q 008153 297 ILEAFN-NANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVE--FEF 373 (576)
Q Consensus 297 ILEA~~-g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVp--FeF 373 (576)
+|-++. ....-+|+|+|-|.|. +...|+.|- |..+||||+. +...++.+.+++..++. .+++ ++|
T Consensus 27 lL~~~~~~~~~~~VLDlG~G~G~----~~l~la~~~---~~~~v~gvDi----~~~~~~~a~~n~~~~~~-~~l~~~v~~ 94 (260)
T 2ozv_A 27 LLASLVADDRACRIADLGAGAGA----AGMAVAARL---EKAEVTLYER----SQEMAEFARRSLELPDN-AAFSARIEV 94 (260)
T ss_dssp HHHHTCCCCSCEEEEECCSSSSH----HHHHHHHHC---TTEEEEEEES----SHHHHHHHHHHTTSGGG-TTTGGGEEE
T ss_pred HHHHHhcccCCCEEEEeCChHhH----HHHHHHHhC---CCCeEEEEEC----CHHHHHHHHHHHHhhhh-CCCcceEEE
Confidence 444443 3345689999999986 333444442 3479999984 34455544444322110 3443 444
Q ss_pred eeeecCCCCCCCcccc--ccCCCCCceEEEEehhhhhh-cc-----------CCCChHHHHHHHH-HhcCCcEEEEEec
Q 008153 374 RGFVCNSLADLEPDML--DIRPPEVETVAVNSVFELHR-LL-----------ARPGGIEKVVSSI-KAMRPKIITIVEQ 437 (576)
Q Consensus 374 ~~v~~~~ledl~~~~L--~lr~~~~EaLaVN~~~~Lh~-L~-----------~~~~~~d~vL~~I-r~L~PkIvtlvEq 437 (576)
.. ..+.++.+..+ .+..+.-..++.|-.|.... .. ......+.+|+.+ +-|+|.-.++++.
T Consensus 95 ~~---~D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 95 LE---ADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp EE---CCTTCCHHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred Ee---CCHHHHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 32 23433311000 01111125677774443210 00 0112356777665 6789987766643
No 152
>1yz7_A Probable translation initiation factor 2 alpha subunit; helical domain, alpha-beta domain; 2.26A {Pyrococcus abyssi}
Probab=23.04 E-value=45 Score=31.78 Aligned_cols=43 Identities=16% Similarity=0.314 Sum_probs=32.5
Q ss_pred CCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEee
Q 008153 333 GPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRG 375 (576)
Q Consensus 333 GPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~~ 375 (576)
|||..|||...+.-......|+++-..+.+..+..|..|.|+-
T Consensus 133 gaP~Y~i~~~~~Dkk~g~~~L~~aie~i~~~I~~~gG~~~v~r 175 (188)
T 1yz7_A 133 GAPRYRIDITAPDYYKAEEVLESIAEEILRVIKEAGGEATLLR 175 (188)
T ss_dssp STTEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred cCcEEEEEEeeCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEEE
Confidence 6777777776643222346788889999999999999999985
No 153
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=21.55 E-value=1.2e+02 Score=28.58 Aligned_cols=56 Identities=18% Similarity=0.169 Sum_probs=34.6
Q ss_pred HHHhhccCCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHH
Q 008153 297 ILEAFNNANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLA 361 (576)
Q Consensus 297 ILEA~~g~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~ 361 (576)
+++.+.+.....|+|+|.|.|. +.-.|+.+-. .|..+||||+. +...++.+.+++.
T Consensus 43 ~l~~~~~~~~~~vLD~gcGsG~----~~~~la~~~~-~~~~~v~gvDi----s~~~l~~A~~~~~ 98 (250)
T 1o9g_A 43 ALARLPGDGPVTLWDPCCGSGY----LLTVLGLLHR-RSLRQVIASDV----DPAPLELAAKNLA 98 (250)
T ss_dssp HHHTSSCCSCEEEEETTCTTSH----HHHHHHHHTG-GGEEEEEEEES----CHHHHHHHHHHHH
T ss_pred HHHhcccCCCCeEEECCCCCCH----HHHHHHHHhc-cCCCeEEEEEC----CHHHHHHHHHHHH
Confidence 4445555567899999999994 3344443311 13579999984 4556655555443
No 154
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=21.17 E-value=1.1e+02 Score=29.44 Aligned_cols=102 Identities=12% Similarity=0.121 Sum_probs=53.5
Q ss_pred CCeeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCce-eEEeeeecCCCC
Q 008153 304 ANRVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVE-FEFRGFVCNSLA 382 (576)
Q Consensus 304 ~~~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVp-FeF~~v~~~~le 382 (576)
...-+|+|+|-|.|.--..|-+. + |..++|+|+. +...++.+. +-++.+|+. .+|.. .+++
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~---~----~~~~v~~vD~----s~~~~~~a~----~~~~~~~l~~v~~~~---~d~~ 140 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIV---R----PELELVLVDA----TRKKVAFVE----RAIEVLGLKGARALW---GRAE 140 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHH---C----TTCEEEEEES----CHHHHHHHH----HHHHHHTCSSEEEEE---CCHH
T ss_pred CCCCEEEEEcCCCCHHHHHHHHH---C----CCCEEEEEEC----CHHHHHHHH----HHHHHhCCCceEEEE---CcHH
Confidence 34558999999998743333322 1 4579999994 344454333 334455663 45542 3344
Q ss_pred CCCccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEEE
Q 008153 383 DLEPDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITIV 435 (576)
Q Consensus 383 dl~~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtlv 435 (576)
++..... .+ +.-..++.+.+ ...+.++..+ +-|+|.-..++
T Consensus 141 ~~~~~~~-~~-~~fD~I~s~a~----------~~~~~ll~~~~~~LkpgG~l~~ 182 (249)
T 3g89_A 141 VLAREAG-HR-EAYARAVARAV----------APLCVLSELLLPFLEVGGAAVA 182 (249)
T ss_dssp HHTTSTT-TT-TCEEEEEEESS----------CCHHHHHHHHGGGEEEEEEEEE
T ss_pred Hhhcccc-cC-CCceEEEECCc----------CCHHHHHHHHHHHcCCCeEEEE
Confidence 4332100 00 11134444432 2356677766 56788876554
No 155
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=21.02 E-value=1.5e+02 Score=25.26 Aligned_cols=106 Identities=8% Similarity=0.094 Sum_probs=53.6
Q ss_pred eeEEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEeeeecCCCCCCC
Q 008153 306 RVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRGFVCNSLADLE 385 (576)
Q Consensus 306 ~VHIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~~v~~~~ledl~ 385 (576)
.-+|+|+|.|.|. +...|+.+ ++ . +|||+. +...++...+++. ..++..+|.. ..+.+..
T Consensus 42 ~~~vLD~GcG~G~----~~~~l~~~--~~-~--v~~vD~----~~~~~~~a~~~~~----~~~~~~~~~~---~d~~~~~ 101 (171)
T 1ws6_A 42 RGRFLDPFAGSGA----VGLEAASE--GW-E--AVLVEK----DPEAVRLLKENVR----RTGLGARVVA---LPVEVFL 101 (171)
T ss_dssp CCEEEEETCSSCH----HHHHHHHT--TC-E--EEEECC----CHHHHHHHHHHHH----HHTCCCEEEC---SCHHHHH
T ss_pred CCeEEEeCCCcCH----HHHHHHHC--CC-e--EEEEeC----CHHHHHHHHHHHH----HcCCceEEEe---ccHHHHH
Confidence 3479999999985 44455554 32 2 999994 3455554444433 3344444442 1222211
Q ss_pred ccccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH---HhcCCcEEEEEecCCC
Q 008153 386 PDMLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI---KAMRPKIITIVEQEAN 440 (576)
Q Consensus 386 ~~~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I---r~L~PkIvtlvEqean 440 (576)
+. +.-..+.-..++.|..+. + . .+.++..+ +-|+|.-+++++-...
T Consensus 102 ~~-~~~~~~~~D~i~~~~~~~-~---~----~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 102 PE-AKAQGERFTVAFMAPPYA-M---D----LAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp HH-HHHTTCCEEEEEECCCTT-S---C----TTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred Hh-hhccCCceEEEEECCCCc-h---h----HHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 00 100000114666665543 1 1 22344444 5689998887765443
No 156
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=20.75 E-value=1.5e+02 Score=30.93 Aligned_cols=100 Identities=14% Similarity=0.178 Sum_probs=50.4
Q ss_pred EEEecccCCCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEeeeecCCCCCCCcc
Q 008153 308 HVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFRGFVCNSLADLEPD 387 (576)
Q Consensus 308 HIIDf~I~~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~~v~~~~ledl~~~ 387 (576)
+|+|+|-|.| +-++ +|.|.|. -|++||+.. ..+ +..+ +.++.-|+.=.... +....++++..
T Consensus 86 ~VLDvG~GtG--iLs~---~Aa~aGA---~~V~ave~s-----~~~-~~a~---~~~~~n~~~~~i~~-i~~~~~~~~lp 147 (376)
T 4hc4_A 86 TVLDVGAGTG--ILSI---FCAQAGA---RRVYAVEAS-----AIW-QQAR---EVVRFNGLEDRVHV-LPGPVETVELP 147 (376)
T ss_dssp EEEEETCTTS--HHHH---HHHHTTC---SEEEEEECS-----TTH-HHHH---HHHHHTTCTTTEEE-EESCTTTCCCS
T ss_pred EEEEeCCCcc--HHHH---HHHHhCC---CEEEEEeCh-----HHH-HHHH---HHHHHcCCCceEEE-EeeeeeeecCC
Confidence 5899888877 3344 3444443 378999842 112 2222 33444454322222 23455555421
Q ss_pred ccccCCCCCceEEEEehhhhhhccCCCChHHHHHHHH-HhcCCcEEEE
Q 008153 388 MLDIRPPEVETVAVNSVFELHRLLARPGGIEKVVSSI-KAMRPKIITI 434 (576)
Q Consensus 388 ~L~lr~~~~EaLaVN~~~~Lh~L~~~~~~~d~vL~~I-r~L~PkIvtl 434 (576)
.+-.+++-+++ -+-|+ ..+.++.+|... |-|+|.-+++
T Consensus 148 ------e~~DvivsE~~--~~~l~-~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 148 ------EQVDAIVSEWM--GYGLL-HESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp ------SCEEEEECCCC--BTTBT-TTCSHHHHHHHHHHHEEEEEEEE
T ss_pred ------ccccEEEeecc--ccccc-ccchhhhHHHHHHhhCCCCceEC
Confidence 11123332332 22333 345688888887 6678876655
No 157
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=20.48 E-value=1.5e+02 Score=23.82 Aligned_cols=34 Identities=15% Similarity=0.346 Sum_probs=22.0
Q ss_pred CeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEe
Q 008153 335 PAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFR 374 (576)
Q Consensus 335 P~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~ 374 (576)
-.+|||||. ...-.|....-..+|+.+||...|.
T Consensus 42 leiritgvp------eqvrkelakeaerlakefnitvtyt 75 (85)
T 2kl8_A 42 LEIRITGVP------EQVRKELAKEAERLAKEFNITVTYT 75 (85)
T ss_dssp EEEEEESCC------HHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred eEEEEecCh------HHHHHHHHHHHHHHHHhcCeEEEEE
Confidence 469999985 2333444444455677888877775
No 158
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=20.04 E-value=4.8e+02 Score=23.54 Aligned_cols=54 Identities=4% Similarity=0.003 Sum_probs=32.6
Q ss_pred CeeEEEecccC-CCcchHHHHHHHhcCCCCCCeeeEeecCCCCCCChHHHHHHHHHHHHHHhHcCceeEEe
Q 008153 305 NRVHVIDFSLK-QGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVEFEFR 374 (576)
Q Consensus 305 ~~VHIIDf~I~-~G~QWpsLiqaLA~RpgGPP~LRITgI~~p~~~~~~~L~etG~rL~~fA~slgVpFeF~ 374 (576)
+.-.|+|+|.| .|. +...|+.+. ..++|||+. +...++.+.++ ++..|+..+|.
T Consensus 55 ~~~~vLDlG~G~~G~----~~~~la~~~----~~~v~~vD~----s~~~~~~a~~~----~~~~~~~v~~~ 109 (230)
T 3evz_A 55 GGEVALEIGTGHTAM----MALMAEKFF----NCKVTATEV----DEEFFEYARRN----IERNNSNVRLV 109 (230)
T ss_dssp SSCEEEEECCTTTCH----HHHHHHHHH----CCEEEEEEC----CHHHHHHHHHH----HHHTTCCCEEE
T ss_pred CCCEEEEcCCCHHHH----HHHHHHHhc----CCEEEEEEC----CHHHHHHHHHH----HHHhCCCcEEE
Confidence 34579999999 886 333344332 258999984 34556554444 34456555555
Done!