Query 008154
Match_columns 576
No_of_seqs 279 out of 3491
Neff 9.2
Searched_HMMs 46136
Date Thu Mar 28 20:09:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008154.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008154hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02939 transferase, transfer 100.0 6.9E-65 1.5E-69 550.0 49.8 489 59-571 475-970 (977)
2 PRK14099 glycogen synthase; Pr 100.0 6.3E-63 1.4E-67 525.2 49.3 479 64-572 2-483 (485)
3 PRK14098 glycogen synthase; Pr 100.0 1.8E-62 3.8E-67 522.2 49.0 482 62-570 2-488 (489)
4 TIGR02095 glgA glycogen/starch 100.0 1.8E-62 3.8E-67 525.8 48.1 472 66-568 1-473 (473)
5 PRK00654 glgA glycogen synthas 100.0 7.9E-61 1.7E-65 510.8 48.3 463 66-570 1-465 (466)
6 cd03791 GT1_Glycogen_synthase_ 100.0 7.9E-59 1.7E-63 499.2 48.3 468 67-566 1-475 (476)
7 cd04299 GT1_Glycogen_Phosphory 100.0 6.6E-60 1.4E-64 512.2 37.5 498 28-565 55-687 (778)
8 TIGR02094 more_P_ylases alpha- 100.0 4.1E-58 8.8E-63 491.5 38.7 464 68-565 1-598 (601)
9 PLN02316 synthase/transferase 100.0 3.8E-56 8.1E-61 491.3 47.3 446 59-570 581-1036(1036)
10 COG0297 GlgA Glycogen synthase 100.0 7.4E-55 1.6E-59 450.7 42.8 481 66-574 1-484 (487)
11 cd03793 GT1_Glycogen_synthase_ 100.0 4E-40 8.7E-45 341.6 26.6 455 68-571 4-590 (590)
12 TIGR02472 sucr_P_syn_N sucrose 100.0 4.5E-38 9.8E-43 333.6 38.9 391 80-565 24-438 (439)
13 TIGR03449 mycothiol_MshA UDP-N 100.0 4.8E-38 1E-42 331.1 37.9 386 68-570 1-404 (405)
14 TIGR02468 sucrsPsyn_pln sucros 100.0 7E-38 1.5E-42 345.4 39.5 450 59-572 163-675 (1050)
15 PRK10307 putative glycosyl tra 100.0 1.9E-37 4.2E-42 327.1 40.1 391 66-571 1-411 (412)
16 TIGR02470 sucr_synth sucrose s 100.0 9.9E-38 2.2E-42 338.3 37.9 433 65-565 255-745 (784)
17 TIGR02149 glgA_Coryne glycogen 100.0 3.6E-37 7.8E-42 322.5 38.2 372 66-569 1-388 (388)
18 PLN02871 UDP-sulfoquinovose:DA 100.0 2.4E-37 5.1E-42 330.7 36.1 378 63-570 56-437 (465)
19 cd03796 GT1_PIG-A_like This fa 100.0 4E-37 8.6E-42 323.0 36.6 365 67-572 1-372 (398)
20 PLN00142 sucrose synthase 100.0 2.8E-36 6.1E-41 326.9 34.8 431 66-565 280-768 (815)
21 cd04962 GT1_like_5 This family 100.0 8.3E-36 1.8E-40 310.1 37.2 366 66-568 1-371 (371)
22 PRK15484 lipopolysaccharide 1, 100.0 8.1E-35 1.8E-39 302.9 36.8 360 67-569 4-379 (380)
23 PRK15427 colanic acid biosynth 100.0 2.8E-35 6.1E-40 308.2 33.2 275 204-567 118-405 (406)
24 cd03818 GT1_ExpC_like This fam 100.0 9.6E-35 2.1E-39 304.9 35.8 374 67-563 1-396 (396)
25 TIGR03088 stp2 sugar transfera 100.0 2.7E-34 6E-39 299.3 37.1 363 66-569 2-374 (374)
26 KOG1111 N-acetylglucosaminyltr 100.0 2.7E-35 5.9E-40 280.9 24.7 365 66-573 1-372 (426)
27 cd03805 GT1_ALG2_like This fam 100.0 3.7E-34 8.1E-39 300.1 31.1 372 66-561 1-392 (392)
28 cd03800 GT1_Sucrose_synthase T 100.0 2.9E-33 6.2E-38 293.7 36.2 365 81-562 20-397 (398)
29 COG0058 GlgP Glucan phosphoryl 100.0 1E-34 2.2E-39 307.4 21.8 479 68-568 97-704 (750)
30 PF05693 Glycogen_syn: Glycoge 100.0 4.4E-36 9.6E-41 308.7 9.8 442 70-570 1-584 (633)
31 cd03802 GT1_AviGT4_like This f 100.0 1.6E-32 3.4E-37 281.2 35.2 330 66-566 1-335 (335)
32 PRK10125 putative glycosyl tra 100.0 7.5E-33 1.6E-37 288.9 32.3 212 294-568 188-405 (405)
33 PLN02846 digalactosyldiacylgly 100.0 9.5E-33 2.1E-37 286.4 32.4 381 64-567 3-391 (462)
34 cd03792 GT1_Trehalose_phosphor 100.0 4.9E-32 1.1E-36 282.0 36.6 360 67-568 1-372 (372)
35 cd04955 GT1_like_6 This family 100.0 7.5E-32 1.6E-36 279.2 36.1 356 67-566 1-363 (363)
36 cd03819 GT1_WavL_like This fam 100.0 4.5E-32 9.6E-37 280.1 32.9 338 80-557 8-355 (355)
37 PRK15179 Vi polysaccharide bio 100.0 5.3E-32 1.2E-36 294.5 33.8 228 298-566 460-692 (694)
38 PRK15490 Vi polysaccharide bio 100.0 2.2E-31 4.8E-36 276.6 36.0 229 296-567 339-575 (578)
39 cd03825 GT1_wcfI_like This fam 100.0 9.4E-32 2E-36 278.5 32.4 351 66-568 1-365 (365)
40 PRK09922 UDP-D-galactose:(gluc 100.0 4E-32 8.6E-37 281.1 29.0 348 66-570 1-358 (359)
41 cd04951 GT1_WbdM_like This fam 100.0 2.2E-31 4.8E-36 275.2 34.4 354 67-566 1-359 (360)
42 cd03812 GT1_CapH_like This fam 100.0 1.2E-31 2.5E-36 277.4 31.7 342 67-550 1-345 (358)
43 PLN02949 transferase, transfer 100.0 1.6E-31 3.5E-36 281.7 33.1 233 289-571 213-460 (463)
44 PRK14986 glycogen phosphorylas 100.0 9.2E-33 2E-37 296.3 23.0 421 79-515 121-694 (815)
45 cd05844 GT1_like_7 Glycosyltra 100.0 1.2E-31 2.6E-36 278.4 30.3 273 204-563 82-366 (367)
46 cd03814 GT1_like_2 This family 100.0 9.6E-31 2.1E-35 270.1 34.0 360 67-566 1-364 (364)
47 cd03807 GT1_WbnK_like This fam 100.0 8.6E-31 1.9E-35 269.7 33.5 358 67-566 1-365 (365)
48 PRK14985 maltodextrin phosphor 100.0 3.2E-32 6.9E-37 290.9 21.9 423 79-515 110-680 (798)
49 cd03795 GT1_like_4 This family 100.0 1E-30 2.3E-35 269.9 32.7 350 67-558 1-357 (357)
50 cd03813 GT1_like_3 This family 100.0 5.3E-31 1.2E-35 282.0 30.9 290 204-566 173-475 (475)
51 cd03821 GT1_Bme6_like This fam 100.0 8.1E-31 1.8E-35 271.0 31.0 366 67-563 1-375 (375)
52 cd03794 GT1_wbuB_like This fam 100.0 1.1E-30 2.5E-35 271.2 31.9 384 67-562 1-394 (394)
53 cd03822 GT1_ecORF704_like This 100.0 4.1E-30 9E-35 265.8 35.6 350 67-566 1-366 (366)
54 cd03806 GT1_ALG11_like This fa 100.0 5.5E-31 1.2E-35 277.0 29.3 382 68-559 3-418 (419)
55 cd03799 GT1_amsK_like This is 100.0 2.7E-30 5.9E-35 266.5 33.8 341 67-560 1-354 (355)
56 cd03809 GT1_mtfB_like This fam 100.0 1E-30 2.2E-35 270.2 30.1 360 67-563 1-365 (365)
57 cd03817 GT1_UGDG_like This fam 100.0 3.6E-30 7.8E-35 266.2 33.2 366 67-567 1-373 (374)
58 cd03823 GT1_ExpE7_like This fa 100.0 5E-30 1.1E-34 264.0 33.5 355 67-566 1-358 (359)
59 TIGR02093 P_ylase glycogen/sta 100.0 2.9E-31 6.2E-36 284.2 23.1 419 79-515 101-678 (794)
60 cd03808 GT1_cap1E_like This fa 100.0 1.9E-29 4E-34 258.9 34.3 353 67-562 1-358 (359)
61 cd04300 GT1_Glycogen_Phosphory 100.0 6.1E-31 1.3E-35 283.0 23.6 420 79-515 104-681 (797)
62 cd03820 GT1_amsD_like This fam 100.0 1.7E-29 3.8E-34 258.0 33.0 341 67-562 1-347 (348)
63 cd03801 GT1_YqgM_like This fam 100.0 3.7E-29 8E-34 257.2 35.5 368 67-566 1-374 (374)
64 cd03816 GT1_ALG1_like This fam 100.0 4.9E-29 1.1E-33 262.4 33.9 370 65-559 3-408 (415)
65 PF08323 Glyco_transf_5: Starc 100.0 3.9E-31 8.5E-36 256.4 11.9 240 67-325 1-244 (245)
66 cd03798 GT1_wlbH_like This fam 100.0 4.5E-28 9.8E-33 249.9 34.6 371 68-568 1-377 (377)
67 PLN02501 digalactosyldiacylgly 100.0 2.3E-28 4.9E-33 256.4 28.7 375 63-565 320-707 (794)
68 cd03811 GT1_WabH_like This fam 100.0 1.6E-27 3.6E-32 243.6 30.7 340 67-547 1-343 (353)
69 PF00343 Phosphorylase: Carboh 100.0 1.8E-28 4E-33 260.0 23.5 421 79-515 21-595 (713)
70 cd03804 GT1_wbaZ_like This fam 100.0 7.5E-28 1.6E-32 248.6 25.9 204 289-561 146-350 (351)
71 TIGR02918 accessory Sec system 100.0 9.8E-28 2.1E-32 255.4 27.1 220 294-568 268-500 (500)
72 TIGR03087 stp1 sugar transfera 100.0 4.2E-28 9E-33 254.6 21.9 222 288-566 164-395 (397)
73 cd04946 GT1_AmsK_like This fam 100.0 9.1E-27 2E-31 244.5 27.8 219 289-562 176-406 (407)
74 PHA01630 putative group 1 glyc 100.0 8.2E-27 1.8E-31 236.3 23.4 218 289-567 86-330 (331)
75 PLN02275 transferase, transfer 99.9 7.3E-26 1.6E-30 235.0 28.2 245 204-529 100-370 (371)
76 PHA01633 putative glycosyl tra 99.9 1.4E-25 3.1E-30 224.4 29.0 231 292-563 88-335 (335)
77 cd04949 GT1_gtfA_like This fam 99.9 2.9E-25 6.2E-30 231.2 23.5 213 294-561 155-372 (372)
78 cd03788 GT1_TPS Trehalose-6-Ph 99.9 2.7E-25 5.9E-30 235.7 23.1 298 204-564 131-458 (460)
79 PRK00726 murG undecaprenyldiph 99.9 1.6E-23 3.5E-28 216.8 32.1 342 65-565 1-355 (357)
80 TIGR02400 trehalose_OtsA alpha 99.9 1.2E-23 2.7E-28 221.2 28.1 290 205-565 128-454 (456)
81 cd03785 GT1_MurG MurG is an N- 99.9 5.5E-22 1.2E-26 204.7 29.1 332 67-559 1-349 (350)
82 TIGR01133 murG undecaprenyldip 99.9 2.1E-21 4.5E-26 200.2 28.2 329 66-558 1-345 (348)
83 PLN03063 alpha,alpha-trehalose 99.9 8.8E-22 1.9E-26 219.6 26.0 303 205-570 148-480 (797)
84 KOG0853 Glycosyltransferase [C 99.9 2.4E-21 5.1E-26 198.1 23.9 240 293-569 206-469 (495)
85 PRK05749 3-deoxy-D-manno-octul 99.9 5.5E-20 1.2E-24 194.9 29.5 234 289-570 171-422 (425)
86 PRK14501 putative bifunctional 99.9 5.5E-21 1.2E-25 213.8 22.5 302 205-571 134-466 (726)
87 PRK13609 diacylglycerol glucos 99.9 8.9E-20 1.9E-24 190.4 30.2 219 295-568 146-372 (380)
88 PF00534 Glycos_transf_1: Glyc 99.9 7.8E-21 1.7E-25 175.3 17.7 165 367-548 2-170 (172)
89 cd04950 GT1_like_1 Glycosyltra 99.8 1.2E-18 2.6E-23 181.1 29.0 222 288-567 145-371 (373)
90 cd01635 Glycosyltransferase_GT 99.8 8.5E-19 1.8E-23 168.4 22.8 118 387-514 109-229 (229)
91 KOG1387 Glycosyltransferase [C 99.8 7.3E-18 1.6E-22 160.8 28.2 296 204-571 150-462 (465)
92 TIGR02398 gluc_glyc_Psyn gluco 99.8 4.9E-18 1.1E-22 177.7 25.5 310 205-566 133-481 (487)
93 PLN02605 monogalactosyldiacylg 99.8 6.2E-18 1.3E-22 176.3 25.5 215 295-564 149-378 (382)
94 PRK13608 diacylglycerol glucos 99.8 4.8E-17 1E-21 169.9 27.5 219 295-570 146-374 (391)
95 KOG3742 Glycogen synthase [Car 99.8 6E-20 1.3E-24 179.7 0.5 459 67-569 29-614 (692)
96 TIGR00236 wecB UDP-N-acetylglu 99.8 3E-16 6.5E-21 162.9 27.5 217 295-563 140-363 (365)
97 PRK09814 beta-1,6-galactofuran 99.7 5.5E-15 1.2E-19 151.1 27.7 184 288-547 115-309 (333)
98 PLN03064 alpha,alpha-trehalose 99.7 9.4E-16 2E-20 170.4 23.6 300 205-569 232-563 (934)
99 PRK00025 lpxB lipid-A-disaccha 99.7 3E-15 6.6E-20 156.3 26.1 199 293-547 131-352 (380)
100 COG0438 RfaG Glycosyltransfera 99.7 9.2E-15 2E-19 148.8 24.9 223 296-570 150-379 (381)
101 cd03786 GT1_UDP-GlcNAc_2-Epime 99.7 2.4E-14 5.3E-19 148.5 27.0 199 293-543 138-344 (363)
102 KOG2941 Beta-1,4-mannosyltrans 99.6 1.6E-12 3.5E-17 124.8 26.7 379 84-561 25-435 (444)
103 PF13692 Glyco_trans_1_4: Glyc 99.5 9.9E-14 2.1E-18 122.3 10.9 129 382-531 2-134 (135)
104 TIGR00215 lpxB lipid-A-disacch 99.4 4E-11 8.7E-16 124.8 26.1 163 290-495 132-302 (385)
105 PRK10117 trehalose-6-phosphate 99.4 4.3E-11 9.4E-16 124.4 22.9 296 205-569 124-455 (474)
106 TIGR03713 acc_sec_asp1 accesso 99.4 1.4E-11 3E-16 131.7 18.9 162 382-564 319-518 (519)
107 PF00982 Glyco_transf_20: Glyc 99.4 3.9E-11 8.5E-16 126.4 20.6 290 204-565 141-472 (474)
108 PF13439 Glyco_transf_4: Glyco 99.3 1.3E-11 2.7E-16 113.5 12.0 171 74-343 6-176 (177)
109 PF13579 Glyco_trans_4_4: Glyc 99.3 4.7E-12 1E-16 114.3 8.7 160 82-337 1-160 (160)
110 COG0380 OtsA Trehalose-6-phosp 99.3 1.1E-09 2.3E-14 113.5 25.0 296 205-567 148-479 (486)
111 PLN02205 alpha,alpha-trehalose 99.3 8.8E-10 1.9E-14 123.9 24.0 307 206-568 203-552 (854)
112 PF13524 Glyco_trans_1_2: Glyc 99.1 2.2E-10 4.7E-15 93.6 9.1 89 459-563 1-92 (92)
113 PRK12446 undecaprenyldiphospho 99.1 2.1E-07 4.5E-12 95.7 29.5 307 80-541 10-330 (352)
114 KOG2099 Glycogen phosphorylase 99.0 1.2E-09 2.7E-14 110.9 8.8 347 207-565 335-826 (843)
115 COG0707 MurG UDP-N-acetylgluco 98.9 2.9E-06 6.4E-11 86.5 30.7 312 80-547 9-335 (357)
116 PF09314 DUF1972: Domain of un 98.9 5E-08 1.1E-12 89.0 14.3 183 66-339 2-185 (185)
117 TIGR02919 accessory Sec system 98.8 6.9E-08 1.5E-12 101.1 15.9 125 398-543 291-418 (438)
118 PF13477 Glyco_trans_4_2: Glyc 98.5 2E-06 4.2E-11 75.9 13.1 107 67-244 1-109 (139)
119 TIGR03568 NeuC_NnaA UDP-N-acet 98.3 0.00031 6.7E-09 72.7 24.1 186 295-529 143-336 (365)
120 PF13528 Glyco_trans_1_3: Glyc 98.2 0.00016 3.5E-09 73.4 20.2 91 381-493 192-283 (318)
121 cd03784 GT1_Gtf_like This fami 98.2 0.00055 1.2E-08 72.0 24.6 123 381-531 239-371 (401)
122 TIGR03590 PseG pseudaminic aci 98.1 0.001 2.3E-08 66.0 24.1 97 382-488 171-268 (279)
123 TIGR03492 conserved hypothetic 98.0 0.0022 4.7E-08 67.1 24.7 217 291-562 155-393 (396)
124 PF02350 Epimerase_2: UDP-N-ac 97.9 0.0005 1.1E-08 70.4 16.4 190 295-531 121-317 (346)
125 PF04007 DUF354: Protein of un 97.8 0.0042 9E-08 62.9 21.4 131 368-529 168-307 (335)
126 PF13844 Glyco_transf_41: Glyc 97.7 0.0011 2.4E-08 69.4 15.7 183 371-568 276-467 (468)
127 COG0763 LpxB Lipid A disacchar 97.7 0.0068 1.5E-07 61.1 20.0 165 292-497 132-301 (381)
128 PF00862 Sucrose_synth: Sucros 97.6 0.00067 1.5E-08 70.1 12.5 179 67-312 274-481 (550)
129 COG1519 KdtA 3-deoxy-D-manno-o 97.6 0.11 2.4E-06 53.2 29.4 211 288-548 169-398 (419)
130 COG0381 WecB UDP-N-acetylgluco 97.5 0.03 6.6E-07 56.6 22.4 222 295-567 144-374 (383)
131 PF12000 Glyco_trans_4_3: Gkyc 97.5 0.0014 3.1E-08 59.2 11.6 147 148-343 19-170 (171)
132 PF02684 LpxB: Lipid-A-disacch 97.3 0.041 9E-07 56.5 21.4 198 291-531 128-339 (373)
133 TIGR00661 MJ1255 conserved hyp 97.3 0.1 2.2E-06 53.0 23.6 92 382-493 189-280 (321)
134 PRK02797 4-alpha-L-fucosyltran 97.0 0.03 6.5E-07 55.0 15.1 167 381-572 145-321 (322)
135 PRK01021 lpxB lipid-A-disaccha 96.9 0.099 2.1E-06 56.5 20.0 160 291-493 356-521 (608)
136 TIGR01426 MGT glycosyltransfer 96.8 0.047 1E-06 57.2 16.1 156 381-564 225-389 (392)
137 COG3914 Spy Predicted O-linked 96.7 0.061 1.3E-06 56.8 15.7 180 371-570 421-616 (620)
138 COG4641 Uncharacterized protei 96.7 0.12 2.7E-06 51.9 17.2 192 327-568 159-362 (373)
139 COG4671 Predicted glycosyl tra 96.6 0.49 1.1E-05 47.2 20.6 137 381-531 219-364 (400)
140 KOG1050 Trehalose-6-phosphate 96.4 0.22 4.8E-06 55.4 19.0 274 204-533 140-441 (732)
141 PF07429 Glyco_transf_56: 4-al 95.8 0.68 1.5E-05 46.4 16.8 116 381-497 184-306 (360)
142 COG1819 Glycosyl transferases, 95.7 0.33 7.1E-06 51.0 15.4 155 381-565 237-399 (406)
143 PRK14089 ipid-A-disaccharide s 95.5 0.65 1.4E-05 47.5 16.4 92 382-487 168-261 (347)
144 PRK10017 colanic acid biosynth 95.1 2.1 4.5E-05 45.2 18.9 132 398-547 260-403 (426)
145 PHA03392 egt ecdysteroid UDP-g 95.0 0.58 1.2E-05 50.7 14.9 122 382-531 297-431 (507)
146 PF04464 Glyphos_transf: CDP-G 95.0 0.72 1.6E-05 47.8 15.2 192 293-532 131-336 (369)
147 PF11997 DUF3492: Domain of un 94.3 0.43 9.4E-06 46.9 10.8 42 66-108 1-42 (268)
148 PF08288 PIGA: PIGA (GPI ancho 93.5 0.27 5.9E-06 38.5 6.1 35 204-244 50-85 (90)
149 PF06258 Mito_fiss_Elm1: Mitoc 93.0 5.7 0.00012 40.0 16.5 117 368-490 135-259 (311)
150 PLN02448 UDP-glycosyltransfera 92.5 4.2 9.2E-05 43.5 15.8 128 381-531 274-414 (459)
151 TIGR02195 heptsyl_trn_II lipop 92.4 2.7 5.9E-05 42.8 13.8 111 368-486 162-276 (334)
152 PLN02863 UDP-glucoronosyl/UDP- 91.6 7.2 0.00016 41.9 16.2 41 63-109 7-47 (477)
153 PF01075 Glyco_transf_9: Glyco 91.2 2.1 4.6E-05 41.4 10.8 112 381-497 105-219 (247)
154 COG1817 Uncharacterized protei 91.0 18 0.00038 35.9 20.4 126 368-522 170-304 (346)
155 PLN03004 UDP-glycosyltransfera 90.7 4.9 0.00011 42.8 13.7 135 381-531 270-423 (451)
156 PLN02670 transferase, transfer 90.5 5.1 0.00011 42.9 13.7 167 381-568 278-466 (472)
157 PF12038 DUF3524: Domain of un 89.5 4.6 9.9E-05 36.1 10.2 35 66-108 1-35 (168)
158 TIGR02193 heptsyl_trn_I lipopo 89.1 9.2 0.0002 38.6 13.9 100 381-487 179-280 (319)
159 PF04101 Glyco_tran_28_C: Glyc 88.7 0.14 3.1E-06 46.4 0.3 44 442-490 59-102 (167)
160 PLN02992 coniferyl-alcohol glu 88.2 9.7 0.00021 40.9 13.7 105 452-568 350-474 (481)
161 PLN02173 UDP-glucosyl transfer 87.9 11 0.00024 40.1 13.9 40 64-109 4-43 (449)
162 PLN02562 UDP-glycosyltransfera 87.4 16 0.00035 38.9 14.9 131 381-531 273-412 (448)
163 PLN03007 UDP-glucosyltransfera 87.2 19 0.00041 38.8 15.4 40 64-109 4-43 (482)
164 PRK10422 lipopolysaccharide co 86.5 11 0.00024 38.7 12.8 102 381-487 183-288 (352)
165 PLN02555 limonoid glucosyltran 86.0 32 0.00069 37.0 16.1 38 66-109 8-45 (480)
166 cd03789 GT1_LPS_heptosyltransf 85.9 6.4 0.00014 38.8 10.4 105 383-494 123-231 (279)
167 PF10087 DUF2325: Uncharacteri 85.6 2.6 5.6E-05 34.3 6.1 81 414-495 2-90 (97)
168 PF00201 UDPGT: UDP-glucoronos 85.3 7.8 0.00017 41.9 11.5 132 381-543 276-416 (500)
169 KOG0780 Signal recognition par 85.3 29 0.00063 35.5 14.1 169 384-566 156-341 (483)
170 PLN02167 UDP-glycosyltransfera 85.2 23 0.00049 38.1 14.7 34 67-106 5-38 (475)
171 TIGR03609 S_layer_CsaB polysac 85.0 9.8 0.00021 38.0 11.3 99 383-486 173-275 (298)
172 PRK10964 ADP-heptose:LPS hepto 84.3 33 0.00072 34.6 15.0 99 382-487 179-279 (322)
173 PLN02410 UDP-glucoronosyl/UDP- 84.3 33 0.00071 36.6 15.2 40 64-109 6-45 (451)
174 PLN02554 UDP-glycosyltransfera 84.1 31 0.00068 37.1 15.2 39 65-109 2-42 (481)
175 PLN02207 UDP-glycosyltransfera 84.0 27 0.0006 37.3 14.5 37 67-109 5-43 (468)
176 PLN00164 glucosyltransferase; 83.6 28 0.00061 37.5 14.6 37 67-109 5-45 (480)
177 TIGR02201 heptsyl_trn_III lipo 83.4 21 0.00046 36.4 13.2 102 381-487 181-286 (344)
178 PLN02764 glycosyltransferase f 83.3 37 0.0008 36.2 15.0 41 63-109 3-43 (453)
179 PLN02210 UDP-glucosyl transfer 83.3 20 0.00044 38.3 13.2 133 381-531 269-414 (456)
180 COG0859 RfaF ADP-heptose:LPS h 83.0 11 0.00024 38.5 10.7 99 382-487 176-277 (334)
181 PF05159 Capsule_synth: Capsul 82.8 10 0.00022 37.3 10.1 102 380-490 115-228 (269)
182 COG3980 spsG Spore coat polysa 82.4 5.7 0.00012 38.7 7.6 90 384-485 161-251 (318)
183 PLN02152 indole-3-acetate beta 82.3 24 0.00051 37.7 13.2 134 381-531 261-416 (455)
184 PRK10916 ADP-heptose:LPS hepto 80.6 20 0.00044 36.7 11.8 98 382-486 181-286 (348)
185 COG2327 WcaK Polysaccharide py 80.0 47 0.001 34.3 13.7 118 400-531 227-349 (385)
186 PLN02208 glycosyltransferase f 78.0 63 0.0014 34.4 14.6 39 64-108 3-41 (442)
187 PF01113 DapB_N: Dihydrodipico 76.8 3.5 7.6E-05 35.3 4.0 47 450-496 61-107 (124)
188 PF01975 SurE: Survival protei 72.7 4.7 0.0001 37.6 4.0 40 66-112 1-40 (196)
189 PLN02534 UDP-glycosyltransfera 70.6 1.6E+02 0.0035 31.8 15.6 39 65-109 8-46 (491)
190 PLN00414 glycosyltransferase f 67.3 92 0.002 33.2 12.9 37 66-108 5-41 (446)
191 COG3660 Predicted nucleoside-d 66.1 1.4E+02 0.0029 29.2 21.8 106 380-489 160-274 (329)
192 PF02951 GSH-S_N: Prokaryotic 63.5 11 0.00024 31.9 4.1 40 66-108 1-40 (119)
193 PRK00207 sulfur transfer compl 63.1 15 0.00033 31.5 5.0 37 66-105 1-38 (128)
194 TIGR01425 SRP54_euk signal rec 60.2 2.3E+02 0.005 29.9 15.1 99 456-565 240-340 (429)
195 COG2910 Putative NADH-flavin r 59.8 12 0.00025 34.3 3.7 33 66-108 1-33 (211)
196 PF03033 Glyco_transf_28: Glyc 59.8 12 0.00026 32.2 3.9 28 81-108 8-35 (139)
197 PF15024 Glyco_transf_18: Glyc 57.5 31 0.00067 37.3 7.0 156 385-566 280-454 (559)
198 COG4088 Predicted nucleotide k 57.0 10 0.00023 35.3 3.0 42 66-112 1-42 (261)
199 TIGR00959 ffh signal recogniti 55.1 2E+02 0.0042 30.5 12.5 97 458-565 242-340 (428)
200 PF11897 DUF3417: Protein of u 54.5 7.9 0.00017 32.8 1.7 41 29-76 72-113 (118)
201 PHA03392 egt ecdysteroid UDP-g 54.1 18 0.00039 39.2 4.9 37 67-108 22-58 (507)
202 PRK10867 signal recognition pa 53.7 2.2E+02 0.0048 30.1 12.7 98 457-565 242-341 (433)
203 PLN03015 UDP-glucosyl transfer 52.0 3.3E+02 0.0072 29.2 14.5 37 67-109 5-42 (470)
204 KOG3349 Predicted glycosyltran 52.0 51 0.0011 29.0 6.2 93 384-486 6-106 (170)
205 PF09949 DUF2183: Uncharacteri 48.1 46 0.00099 27.2 5.1 32 410-441 63-94 (100)
206 PRK00048 dihydrodipicolinate r 48.0 61 0.0013 31.6 7.1 45 451-495 55-99 (257)
207 TIGR01915 npdG NADPH-dependent 47.9 24 0.00051 33.5 4.1 26 82-107 7-32 (219)
208 PF06925 MGDG_synth: Monogalac 47.9 77 0.0017 28.5 7.3 18 295-312 136-153 (169)
209 PF08660 Alg14: Oligosaccharid 46.8 1.7E+02 0.0037 26.4 9.3 28 81-108 7-36 (170)
210 TIGR00288 conserved hypothetic 46.8 85 0.0018 28.1 7.0 67 394-464 88-156 (160)
211 TIGR00696 wecB_tagA_cpsF bacte 44.9 1.4E+02 0.003 27.3 8.3 100 395-497 32-141 (177)
212 PF10649 DUF2478: Protein of u 44.9 34 0.00073 30.6 4.2 38 452-489 89-132 (159)
213 COG1819 Glycosyl transferases, 43.7 24 0.00051 37.1 3.6 38 65-108 1-38 (406)
214 PLN02695 GDP-D-mannose-3',5'-e 41.8 34 0.00074 35.4 4.5 38 60-107 16-53 (370)
215 KOG4626 O-linked N-acetylgluco 41.1 2.3E+02 0.0049 31.3 10.1 184 371-570 750-943 (966)
216 PF02374 ArsA_ATPase: Anion-tr 41.0 33 0.00071 34.5 4.0 37 66-109 1-39 (305)
217 cd01020 TroA_b Metal binding p 40.4 1.3E+02 0.0029 29.3 8.1 81 452-546 48-129 (264)
218 cd06533 Glyco_transf_WecG_TagA 40.1 1.8E+02 0.0039 26.2 8.4 101 393-496 28-139 (171)
219 PRK10840 transcriptional regul 40.0 3.1E+02 0.0066 25.4 11.6 66 456-531 49-125 (216)
220 PF03358 FMN_red: NADPH-depend 39.6 50 0.0011 28.9 4.7 40 66-108 1-40 (152)
221 PRK06249 2-dehydropantoate 2-r 38.9 41 0.00089 33.8 4.4 35 63-108 3-37 (313)
222 PF03016 Exostosin: Exostosin 38.7 43 0.00093 33.2 4.5 64 450-523 230-296 (302)
223 PRK13932 stationary phase surv 38.6 45 0.00097 32.5 4.4 41 63-111 3-43 (257)
224 KOG2884 26S proteasome regulat 38.4 3.5E+02 0.0075 25.5 11.0 118 382-531 108-228 (259)
225 PRK10360 DNA-binding transcrip 38.3 2.9E+02 0.0063 24.6 10.8 66 456-531 47-117 (196)
226 CHL00072 chlL photochlorophyll 38.3 36 0.00078 33.9 3.8 35 66-108 1-37 (290)
227 PRK13236 nitrogenase reductase 37.2 46 0.00099 33.2 4.4 41 61-108 1-43 (296)
228 KOG1021 Acetylglucosaminyltran 36.7 1.1E+02 0.0023 32.8 7.3 48 450-497 337-387 (464)
229 PLN00016 RNA-binding protein; 36.6 33 0.00072 35.5 3.4 40 63-108 50-89 (378)
230 cd03146 GAT1_Peptidase_E Type 35.7 3.7E+02 0.0081 25.1 11.5 106 385-490 3-124 (212)
231 PRK03692 putative UDP-N-acetyl 34.6 2.1E+02 0.0046 27.6 8.3 99 395-496 89-197 (243)
232 PRK00771 signal recognition pa 34.3 1.9E+02 0.0042 30.7 8.6 98 457-565 234-333 (437)
233 PF01297 TroA: Periplasmic sol 34.2 64 0.0014 31.3 4.8 83 452-546 43-126 (256)
234 PRK04020 rps2P 30S ribosomal p 33.9 4E+02 0.0087 25.0 11.3 100 393-495 48-153 (204)
235 TIGR01281 DPOR_bchL light-inde 33.8 48 0.001 32.3 3.9 35 66-108 1-37 (268)
236 PF11440 AGT: DNA alpha-glucos 33.8 4.8E+02 0.01 25.8 14.5 154 368-529 168-350 (355)
237 KOG1429 dTDP-glucose 4-6-dehyd 32.5 67 0.0014 31.7 4.3 39 59-107 21-59 (350)
238 PLN03007 UDP-glucosyltransfera 32.4 69 0.0015 34.5 5.1 35 452-488 357-391 (482)
239 PF04230 PS_pyruv_trans: Polys 31.9 2.5E+02 0.0053 26.7 8.7 38 445-487 246-283 (286)
240 COG0300 DltE Short-chain dehyd 31.8 74 0.0016 31.2 4.6 35 65-108 5-39 (265)
241 PLN02166 dTDP-glucose 4,6-dehy 31.6 58 0.0013 34.6 4.3 35 63-107 118-152 (436)
242 COG0003 ArsA Predicted ATPase 31.1 84 0.0018 31.8 5.1 37 66-109 2-40 (322)
243 PF03808 Glyco_tran_WecB: Glyc 30.9 2.7E+02 0.0058 25.2 8.0 102 393-497 30-142 (172)
244 CHL00194 ycf39 Ycf39; Provisio 29.9 63 0.0014 32.4 4.1 27 82-108 7-33 (317)
245 PF01408 GFO_IDH_MocA: Oxidore 29.7 1.7E+02 0.0037 24.1 6.2 36 452-487 56-93 (120)
246 PF00185 OTCace: Aspartate/orn 29.6 69 0.0015 28.6 3.8 35 65-108 2-36 (158)
247 PF03446 NAD_binding_2: NAD bi 28.8 77 0.0017 28.3 4.0 31 65-106 1-31 (163)
248 PF10727 Rossmann-like: Rossma 28.5 35 0.00077 29.3 1.7 34 63-107 8-41 (127)
249 TIGR01007 eps_fam capsular exo 28.5 1.1E+02 0.0024 28.3 5.2 40 66-109 17-56 (204)
250 PF03721 UDPG_MGDP_dh_N: UDP-g 28.2 52 0.0011 30.3 2.9 31 66-107 1-31 (185)
251 PRK14619 NAD(P)H-dependent gly 27.9 86 0.0019 31.4 4.6 34 64-108 3-36 (308)
252 TIGR03012 sulf_tusD_dsrE sulfu 27.9 1.2E+02 0.0026 25.9 4.9 35 68-105 2-37 (127)
253 TIGR00087 surE 5'/3'-nucleotid 27.8 82 0.0018 30.5 4.2 38 66-111 1-38 (244)
254 PF09198 T4-Gluco-transf: Bact 27.7 1.6E+02 0.0036 18.5 4.4 36 66-103 1-38 (38)
255 PF03808 Glyco_tran_WecB: Glyc 27.5 3.1E+02 0.0066 24.8 7.8 59 386-444 76-134 (172)
256 PLN02778 3,5-epimerase/4-reduc 27.5 75 0.0016 31.7 4.1 35 61-105 5-39 (298)
257 PRK08305 spoVFB dipicolinate s 27.4 1.3E+02 0.0027 28.1 5.2 28 81-108 13-42 (196)
258 COG0569 TrkA K+ transport syst 26.3 53 0.0011 31.3 2.6 26 82-107 6-31 (225)
259 CHL00175 minD septum-site dete 26.1 1.7E+02 0.0036 28.8 6.3 46 61-110 10-55 (281)
260 PLN02208 glycosyltransferase f 26.0 1.1E+02 0.0024 32.6 5.1 68 452-531 323-400 (442)
261 COG0803 LraI ABC-type metal io 25.8 2.3E+02 0.0049 28.4 7.2 90 452-547 77-168 (303)
262 PRK02122 glucosamine-6-phospha 25.6 2.5E+02 0.0055 31.5 8.0 42 62-109 366-407 (652)
263 PLN02206 UDP-glucuronate decar 25.0 90 0.002 33.2 4.3 35 63-107 117-151 (442)
264 COG1763 MobB Molybdopterin-gua 25.0 1.3E+02 0.0028 27.0 4.6 39 65-108 1-39 (161)
265 COG3980 spsG Spore coat polysa 25.0 1.1E+02 0.0024 30.2 4.3 39 66-106 1-39 (318)
266 PRK00211 sulfur relay protein 24.9 1.4E+02 0.003 25.2 4.6 38 66-106 2-39 (119)
267 PRK13933 stationary phase surv 24.8 1.1E+02 0.0023 29.9 4.3 38 66-111 1-38 (253)
268 COG1922 WecG Teichoic acid bio 24.6 4.1E+02 0.009 25.8 8.2 102 393-497 90-202 (253)
269 COG1618 Predicted nucleotide k 24.5 2.2E+02 0.0049 25.7 5.8 73 448-530 92-175 (179)
270 COG2204 AtoC Response regulato 24.2 7.4E+02 0.016 26.5 10.7 110 413-532 6-122 (464)
271 PRK06719 precorrin-2 dehydroge 24.1 62 0.0014 28.8 2.5 26 84-109 21-46 (157)
272 TIGR00715 precor6x_red precorr 24.1 1.1E+02 0.0024 29.9 4.3 54 437-490 175-233 (256)
273 PRK04531 acetylglutamate kinas 24.0 2.5E+02 0.0054 29.4 7.2 48 381-430 36-85 (398)
274 PF00201 UDPGT: UDP-glucoronos 23.9 36 0.00077 36.8 1.1 29 81-109 9-37 (500)
275 TIGR03029 EpsG chain length de 23.9 1.5E+02 0.0033 29.0 5.5 28 81-108 114-141 (274)
276 PRK09739 hypothetical protein; 23.8 1.6E+02 0.0035 27.2 5.4 40 65-107 3-42 (199)
277 PRK06732 phosphopantothenate-- 23.7 1E+02 0.0022 29.5 4.0 32 68-107 17-48 (229)
278 PRK10427 putative PTS system f 23.5 1.6E+02 0.0034 24.7 4.6 37 66-107 3-41 (114)
279 PF06057 VirJ: Bacterial virul 23.5 1.2E+02 0.0027 27.9 4.3 33 68-107 5-37 (192)
280 TIGR00036 dapB dihydrodipicoli 23.2 2.6E+02 0.0057 27.3 6.9 41 454-494 66-106 (266)
281 PF06564 YhjQ: YhjQ protein; 23.1 1.5E+02 0.0031 28.7 4.9 26 82-107 13-38 (243)
282 PRK05647 purN phosphoribosylgl 23.0 3.5E+02 0.0077 25.2 7.4 35 65-108 1-37 (200)
283 TIGR00639 PurN phosphoribosylg 23.0 4.8E+02 0.01 24.1 8.2 34 66-108 1-36 (190)
284 cd06533 Glyco_transf_WecG_TagA 22.9 3.1E+02 0.0067 24.7 6.8 50 391-440 79-128 (171)
285 cd01016 TroA Metal binding pro 22.9 2.7E+02 0.0058 27.4 7.0 81 452-539 46-128 (276)
286 COG1087 GalE UDP-glucose 4-epi 22.6 1E+02 0.0022 30.7 3.7 28 81-108 6-33 (329)
287 PF06506 PrpR_N: Propionate ca 22.5 3.8E+02 0.0082 24.2 7.4 25 397-421 63-87 (176)
288 PLN02427 UDP-apiose/xylose syn 22.2 1.1E+02 0.0024 31.7 4.3 36 61-106 10-46 (386)
289 PLN02989 cinnamyl-alcohol dehy 22.0 1.3E+02 0.0029 30.0 4.8 26 82-107 12-37 (325)
290 PLN02662 cinnamyl-alcohol dehy 21.9 1.5E+02 0.0031 29.6 5.0 26 82-107 11-36 (322)
291 PF13614 AAA_31: AAA domain; P 21.6 2.5E+02 0.0054 24.3 6.0 39 68-111 3-41 (157)
292 PF00070 Pyr_redox: Pyridine n 21.5 93 0.002 23.8 2.8 26 83-108 6-31 (80)
293 TIGR01012 Sa_S2_E_A ribosomal 21.5 6.2E+02 0.013 23.5 8.5 99 394-495 43-147 (196)
294 PRK07454 short chain dehydroge 21.5 1.2E+02 0.0026 28.7 4.1 34 65-107 5-38 (241)
295 PTZ00254 40S ribosomal protein 21.4 5E+02 0.011 25.2 8.1 100 393-495 51-157 (249)
296 PRK06849 hypothetical protein; 21.3 1.2E+02 0.0027 31.4 4.5 35 64-108 3-37 (389)
297 smart00672 CAP10 Putative lipo 21.2 5.4E+02 0.012 25.0 8.6 81 473-567 161-248 (256)
298 PRK10675 UDP-galactose-4-epime 21.2 1.1E+02 0.0023 30.9 3.9 25 82-106 7-31 (338)
299 PRK07308 flavodoxin; Validated 20.7 1.5E+02 0.0033 25.7 4.3 34 66-106 4-37 (146)
300 PRK01906 tetraacyldisaccharide 20.6 4.4E+02 0.0095 26.9 8.0 39 68-111 58-98 (338)
301 PRK08655 prephenate dehydrogen 20.6 1.1E+02 0.0024 32.5 3.9 27 82-108 7-33 (437)
302 PLN02764 glycosyltransferase f 20.6 1.7E+02 0.0036 31.3 5.2 67 452-531 329-406 (453)
No 1
>PLN02939 transferase, transferring glycosyl groups
Probab=100.00 E-value=6.9e-65 Score=549.96 Aligned_cols=489 Identities=33% Similarity=0.535 Sum_probs=398.0
Q ss_pred hhccCCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCee
Q 008154 59 KAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQ 138 (576)
Q Consensus 59 ~~~~~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (576)
...+.++|||+|+++|+.|+.++||++-+++.|+++|+++||+|.||+|.|+..... ...........+.+.+.+...
T Consensus 475 ~~~~~~~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~GhdV~VIlP~Y~~i~~~--~~~~~~~~~~~~~~~~~g~~~ 552 (977)
T PLN02939 475 LSGTSSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYD--QIRNLKVLDVVVESYFDGNLF 552 (977)
T ss_pred cCCCCCCCEEEEEEcccccccccccHHHHHHHHHHHHHHcCCeEEEEeCCCcccChh--hhhcccccceEEEEeecCcee
Confidence 455577899999999999999999999999999999999999999999999754211 011000012223333444455
Q ss_pred EEEEEEeeecCeEEEEecCC---CCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCcc
Q 008154 139 EIAFFHEYREGVDWVFVDHP---SYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHA 215 (576)
Q Consensus 139 ~~~~~~~~~~gv~v~~l~~~---~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~ 215 (576)
..++|...++||++|+++++ .|..+..+||. .|+..||++|++++++++...+ + +|||||||+|++
T Consensus 553 ~~~v~~~~~~GV~vyfId~~~~~~fF~R~~iYg~-----~Dn~~RF~~FsrAaLe~~~~~~---~---~PDIIH~HDW~T 621 (977)
T PLN02939 553 KNKIWTGTVEGLPVYFIEPQHPSKFFWRAQYYGE-----HDDFKRFSYFSRAALELLYQSG---K---KPDIIHCHDWQT 621 (977)
T ss_pred EEEEEEEEECCeeEEEEecCCchhccCCCCCCCC-----ccHHHHHHHHHHHHHHHHHhcC---C---CCCEEEECCccH
Confidence 68999999999999999853 25556678874 4899999999999999987653 2 899999999999
Q ss_pred chHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHH
Q 008154 216 GLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIV 295 (576)
Q Consensus 216 ~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 295 (576)
++++.++.......+ ..++++|||+|+..++|.|+...+..+|++...+......- ..+.+.+|+.+.++.
T Consensus 622 aLV~pll~~~y~~~~-~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le--------~~~~~~iN~LK~GIv 692 (977)
T PLN02939 622 AFVAPLYWDLYAPKG-FNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQ--------DNAHGRINVVKGAIV 692 (977)
T ss_pred HHHHHHHHHHHhhcc-CCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhh--------hccCCchHHHHHHHH
Confidence 998544443222111 25689999999999999999888888888877653211100 002456899999999
Q ss_pred hccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcC
Q 008154 296 TADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELG 375 (576)
Q Consensus 296 ~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 375 (576)
+||.|++||+.+++++.+ .++++|++.+.....++.+|+||||++.|.|.....|..+|...+|.++..++..+++.+|
T Consensus 693 ~AD~VtTVSptYA~EI~t-e~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelG 771 (977)
T PLN02939 693 YSNIVTTVSPTYAQEVRS-EGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLG 771 (977)
T ss_pred hCCeeEeeeHHHHHHHHH-HhccchHHHhccccCCceEEecceehhhcCCccccccccccChhhhhhhhhhhHHHHHHhC
Confidence 999999999999999987 7788899988888999999999999999999988888899999999999999999999999
Q ss_pred CCCC-CCCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCC-hhhHHHHHHHHHHh--cCceEEEccCChhHHH
Q 008154 376 LPIR-PDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGD-PQFESWMRDTEATY--KDKYRGWVGFNVPISH 451 (576)
Q Consensus 376 i~~~-~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 451 (576)
++.+ ++.++|+|+||+.+.||++++++|+.++...+++|+|+|+|+ +.++...+.+...+ ..++.+...++..+..
T Consensus 772 L~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~FlG~~de~lah 851 (977)
T PLN02939 772 LSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYDEALSH 851 (977)
T ss_pred CCcccccceEEEEeecCCcccChHHHHHHHHHHhhcCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEEeccCHHHHH
Confidence 9843 467899999999999999999999998877789999999995 33344455555544 3457666677777777
Q ss_pred HHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHH
Q 008154 452 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 452 ~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
.+|+++|++|+||++|+||++++|||+||+|+|++++||..|.|.+.+... ..+.+.||++++++|+++++++|.+++.
T Consensus 852 ~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~-i~~eg~NGfLf~~~D~eaLa~AL~rAL~ 930 (977)
T PLN02939 852 SIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDET-IPVELRNGFTFLTPDEQGLNSALERAFN 930 (977)
T ss_pred HHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccc-cccCCCceEEecCCCHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999997643221 0122579999999999999999999988
Q ss_pred HhhhCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhhC
Q 008154 532 TYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASID 571 (576)
Q Consensus 532 ~~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y~~~~~~ 571 (576)
.+.+|++.|.+++++++.+.|||++++++|.++|+.++..
T Consensus 931 ~~~~dpe~~~~L~~~am~~dFSWe~~A~qYeeLY~~ll~~ 970 (977)
T PLN02939 931 YYKRKPEVWKQLVQKDMNIDFSWDSSASQYEELYQRAVAR 970 (977)
T ss_pred HhccCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Confidence 7667899999999999889999999999999999998764
No 2
>PRK14099 glycogen synthase; Provisional
Probab=100.00 E-value=6.3e-63 Score=525.15 Aligned_cols=479 Identities=37% Similarity=0.600 Sum_probs=386.8
Q ss_pred CCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeec-CCeeEEEE
Q 008154 64 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCF-GGEQEIAF 142 (576)
Q Consensus 64 ~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 142 (576)
++|||+|++.|..|+.++||++-+++.|.++|+++||+|.||.|.|+.-... .........+... +. ..++
T Consensus 2 ~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v~~P~y~~~~~~------~~~~~~~~~~~~~~~~--~~~~ 73 (485)
T PRK14099 2 TPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGYPAVLAG------IEDAEQVHSFPDLFGG--PARL 73 (485)
T ss_pred CCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcEEEEeCCCcchhhh------hcCceEEEEEeeeCCc--eEEE
Confidence 4599999999999999999999999999999999999999999999763210 1011111112111 22 5678
Q ss_pred EEeeecCeEEEEecCCCCCCC-CCCCCCC-CCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHH
Q 008154 143 FHEYREGVDWVFVDHPSYHRP-GNPYGDI-NGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPV 220 (576)
Q Consensus 143 ~~~~~~gv~v~~l~~~~~~~~-~~~y~~~-~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~ 220 (576)
+....+||++|+++++.|..+ ..+|++. .++|.|+..||++|+.+++++++.+.. .+ +|||||+|+|++++++.
T Consensus 74 ~~~~~~~v~~~~~~~~~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~-~~---~pDIiH~Hdw~~~l~~~ 149 (485)
T PRK14099 74 LAARAGGLDLFVLDAPHLYDRPGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVP-GF---VPDIVHAHDWQAGLAPA 149 (485)
T ss_pred EEEEeCCceEEEEeChHhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhcc-CC---CCCEEEECCcHHHHHHH
Confidence 888889999999999886554 4588764 357999999999999999988754311 23 89999999999999998
Q ss_pred HHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccce
Q 008154 221 LLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRL 300 (576)
Q Consensus 221 ~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v 300 (576)
++..+.. .++|+|+|+|+..+++.++...+..++++...+...... +.+..++++.+++.||.|
T Consensus 150 ~l~~~~~-----~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~k~~i~~ad~v 213 (485)
T PRK14099 150 YLHYSGR-----PAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVE-----------YYGGIGYLKAGLQLADRI 213 (485)
T ss_pred HHHhCCC-----CCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhh-----------hCCCccHHHHHHHhcCee
Confidence 8864321 468999999999999999888877788776655322111 134468899999999999
Q ss_pred eccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCC
Q 008154 301 LTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRP 380 (576)
Q Consensus 301 ~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 380 (576)
++||+.+++++.+...+.++++.+.....++.+|+||||++.|.|.....+..+|...++.++..++..+++.+|++.++
T Consensus 214 itVS~~~a~ei~~~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~ 293 (485)
T PRK14099 214 TTVSPTYALEIQGPEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGLDPDP 293 (485)
T ss_pred eecChhHHHHHhcccCCcChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcCCCccc
Confidence 99999999999876666777777777788999999999999999988777777888878888888889999999998656
Q ss_pred CCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEE
Q 008154 381 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDIL 460 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~ 460 (576)
+.++++++||+.++||++++++|++++.+++++|+|+|+|++..++..+.+.+....++..+.++++++...++++||++
T Consensus 294 ~~~li~~VgRL~~~KG~d~Li~A~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~v~~~~G~~~~l~~~~~a~aDif 373 (485)
T PRK14099 294 DALLLGVISRLSWQKGLDLLLEALPTLLGEGAQLALLGSGDAELEARFRAAAQAYPGQIGVVIGYDEALAHLIQAGADAL 373 (485)
T ss_pred CCcEEEEEecCCccccHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCHHHHHHHHhcCCEE
Confidence 78899999999999999999999999987789999999997655666666665666676667888776664445789999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHH
Q 008154 461 LMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSW 540 (576)
Q Consensus 461 v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~ 540 (576)
|+||++|+||++.+|||+||+|+|+++.||..|.+.+.+.. .+..+..+|++++++|+++++++|.+++..+ +|++.|
T Consensus 374 v~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~-~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~-~d~~~~ 451 (485)
T PRK14099 374 LVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEM-AIATGVATGVQFSPVTADALAAALRKTAALF-ADPVAW 451 (485)
T ss_pred EECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeeccccc-ccccCCCceEEeCCCCHHHHHHHHHHHHHHh-cCHHHH
Confidence 99999999999999999999999999999999999762100 0001126899999999999999999875433 588999
Q ss_pred HHHHHHHHhhhCCHHHHHHHHHHHHHHhhhCC
Q 008154 541 EGLMRRGMEKDYTWENAAIQYEQVFEWASIDP 572 (576)
Q Consensus 541 ~~~~~~a~~~~fs~~~~~~~y~~~y~~~~~~~ 572 (576)
.+++++++.++|||++++++|.++|+++++..
T Consensus 452 ~~l~~~~~~~~fSw~~~a~~y~~lY~~l~~~~ 483 (485)
T PRK14099 452 RRLQRNGMTTDVSWRNPAQHYAALYRSLVAER 483 (485)
T ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHHHhhh
Confidence 99999998889999999999999999987643
No 3
>PRK14098 glycogen synthase; Provisional
Probab=100.00 E-value=1.8e-62 Score=522.21 Aligned_cols=482 Identities=31% Similarity=0.545 Sum_probs=387.6
Q ss_pred cCCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEE
Q 008154 62 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIA 141 (576)
Q Consensus 62 ~~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (576)
..++|||+|++.|..|+.++||++-+++.|.++|+++||+|.||.|.|+.-........ .......+.+...+.....+
T Consensus 2 ~~~~~~il~v~~E~~p~~k~Ggl~dv~~~Lp~al~~~g~~v~v~~P~y~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 80 (489)
T PRK14098 2 SRRNFKVLYVSGEVSPFVRVSALADFMASFPQALEEEGFEARIMMPKYGTINDRKFRLH-DVLRLSDIEVPLKEKTDLLH 80 (489)
T ss_pred CCCCcEEEEEeecchhhcccchHHHHHHHHHHHHHHCCCeEEEEcCCCCchhhhhhccc-cceEEEEEEEeecCeeEEEE
Confidence 34569999999999999999999999999999999999999999999976321000000 00011112223322222333
Q ss_pred EEEeeec--CeEEEEecCCCCCCCCCCCCCC--CCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccch
Q 008154 142 FFHEYRE--GVDWVFVDHPSYHRPGNPYGDI--NGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGL 217 (576)
Q Consensus 142 ~~~~~~~--gv~v~~l~~~~~~~~~~~y~~~--~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~ 217 (576)
+.....+ ++++|+++++.|..+..+|++. .++|.|+..||++|+.++++.+...+ + +|||||+|+|++++
T Consensus 81 ~~~~~~~~~~v~~~~~~~~~~f~r~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~~---~---~pDiiH~hdw~t~l 154 (489)
T PRK14098 81 VKVTALPSSKIQTYFLYNEKYFKRNGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRLG---W---KPDIIHCHDWYAGL 154 (489)
T ss_pred EEEecccCCCceEEEEeCHHHcCCCCcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhcC---C---CCCEEEecCcHHHH
Confidence 3333333 6999999999887777899874 36899999999999999999887653 2 89999999999999
Q ss_pred HHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhc
Q 008154 218 VPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTA 297 (576)
Q Consensus 218 ~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a 297 (576)
++.+++.+........++|+|+|+|+..+++.++...+..+ ++...+.... .+.+.+|+++.++..|
T Consensus 155 ~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~-~~~~~~~~~~------------~~~~~~n~lk~~i~~a 221 (489)
T PRK14098 155 VPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKL-LPEEVCSGLH------------REGDEVNMLYTGVEHA 221 (489)
T ss_pred HHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHh-CCHHhhhhhh------------hcCCcccHHHHHHHhc
Confidence 99999876533332357899999999999998877655433 3333221110 0134579999999999
Q ss_pred cceeccCccchhhhccc-cCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCC
Q 008154 298 DRLLTVSKGYSWEITTV-EGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGL 376 (576)
Q Consensus 298 d~v~~vS~~~~~~~~~~-~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 376 (576)
|.|++||+.+++++.+. .+++++.+.+.....++.+|+||||++.|.|.....+..+|....+.++..++..+++.+|+
T Consensus 222 d~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl 301 (489)
T PRK14098 222 DLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLENKKALLEEVGL 301 (489)
T ss_pred CcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHHHHHHHHHhCC
Confidence 99999999999999763 45667777777778899999999999999988777777788887888888899999999999
Q ss_pred CCCCCCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhc
Q 008154 377 PIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAG 456 (576)
Q Consensus 377 ~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 456 (576)
+.+++.++|+++||+.+.||++++++|+.++.+++++|+|+|+|++.+++.++.+.+.+..++.+...++.+++..++++
T Consensus 302 ~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~V~~~g~~~~~~~~~~~a~ 381 (489)
T PRK14098 302 PFDEETPLVGVIINFDDFQGAELLAESLEKLVELDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTDAFFHLAIAG 381 (489)
T ss_pred CCccCCCEEEEeccccccCcHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEEecCHHHHHHHHHh
Confidence 87778899999999999999999999999998778999999999765556666666666667777777788888899999
Q ss_pred CCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhC
Q 008154 457 CDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREH 536 (576)
Q Consensus 457 ~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~ 536 (576)
||++|+||.+|+||++.+|||+||+|+|+++.||..|.+.+... ++.+|++++++|+++++++|.+++..+ +|
T Consensus 382 aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~------~~~~G~l~~~~d~~~la~ai~~~l~~~-~~ 454 (489)
T PRK14098 382 LDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSE------DKGSGFIFHDYTPEALVAKLGEALALY-HD 454 (489)
T ss_pred CCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCC------CCCceeEeCCCCHHHHHHHHHHHHHHH-cC
Confidence 99999999999999999999999999999999999998864211 157999999999999999999987644 57
Q ss_pred HHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhh
Q 008154 537 KSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASI 570 (576)
Q Consensus 537 ~~~~~~~~~~a~~~~fs~~~~~~~y~~~y~~~~~ 570 (576)
++.|.+++++++++.|||++++++|.++|+++++
T Consensus 455 ~~~~~~~~~~~~~~~fsw~~~a~~y~~lY~~~~~ 488 (489)
T PRK14098 455 EERWEELVLEAMERDFSWKNSAEEYAQLYRELLG 488 (489)
T ss_pred HHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhc
Confidence 8999999999888999999999999999998874
No 4
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=100.00 E-value=1.8e-62 Score=525.76 Aligned_cols=472 Identities=44% Similarity=0.729 Sum_probs=395.0
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 145 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (576)
|||+++|+|+.|+.++||++.++..|+++|+++||+|.|++|.|+..... ..+.........+...++...+++|..
T Consensus 1 m~i~~vs~E~~P~~k~GGl~~~v~~L~~aL~~~G~~v~v~~p~y~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (473)
T TIGR02095 1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIEDE---VDDQVKVVELVDLSVGPRTLYVKVFEG 77 (473)
T ss_pred CeEEEEEeccccccCcCcHHHHHHHHHHHHHHcCCeEEEEecCCcChhhh---hccCeEEEEEEEEeecCceeEEEEEEE
Confidence 89999999999988999999999999999999999999999999764321 111122234455666778889999999
Q ss_pred eecCeEEEEecCCC-CCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHh
Q 008154 146 YREGVDWVFVDHPS-YHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLAS 224 (576)
Q Consensus 146 ~~~gv~v~~l~~~~-~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~ 224 (576)
.++|+++|+++++. +.+...+|++ +|.++..|+..|+.++.+++...+. +|||||+|+|++++++.+++.
T Consensus 78 ~~~~v~~~~i~~~~~~~r~~~~y~~---~~~d~~~r~~~f~~a~~~~~~~~~~------~~DiiH~hdw~~~~~~~~l~~ 148 (473)
T TIGR02095 78 VVEGVPVYFIDNPSLFDRPGGIYGD---DYPDNAERFAFFSRAAAELLSGLGW------QPDVVHAHDWHTALVPALLKA 148 (473)
T ss_pred EECCceEEEEECHHHcCCCCCCCCC---CCCCHHHHHHHHHHHHHHHHHhcCC------CCCEEEECCcHHHHHHHHHHh
Confidence 99999999999886 4444568885 6778999999999999998766432 899999999999999998886
Q ss_pred hccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccC
Q 008154 225 KYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 304 (576)
Q Consensus 225 ~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS 304 (576)
..+. .++|+|+|+|+..+++.++...+..++++...+..... .....+++++.+++.||.+++||
T Consensus 149 ~~~~----~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~k~~~~~ad~v~tVS 213 (473)
T TIGR02095 149 VYRP----NPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGL-----------EFYGRVNFLKGGIVYADRVTTVS 213 (473)
T ss_pred hccC----CCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhh-----------hcCCchHHHHHHHHhCCcCeecC
Confidence 5421 14899999999998998887776666666444322111 11346789999999999999999
Q ss_pred ccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCE
Q 008154 305 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPL 384 (576)
Q Consensus 305 ~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 384 (576)
+.+++++.+..++.++++.+.....++.+|+||||.+.|.|.....+..+|...+|.++..++..+++.+|++.+++.++
T Consensus 214 ~~~~~ei~~~~~~~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~ 293 (473)
T TIGR02095 214 PTYAREILTPEFGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEELGLPVDDDVPL 293 (473)
T ss_pred HhHHHHhcCCcCCccchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHHHHHcCCCccCCCCE
Confidence 99999998766667777666667889999999999999998877777788888888888888999999999986567899
Q ss_pred EEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEeCC
Q 008154 385 IGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPS 464 (576)
Q Consensus 385 i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps 464 (576)
|+|+||+.++||++++++|+.++.+.+++|+|+|+|++.+++..+.+......++.+..+++.+++..++++||++|+||
T Consensus 294 i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv~l~pS 373 (473)
T TIGR02095 294 FGVISRLTQQKGVDLLLAALPELLELGGQLVVLGTGDPELEEALRELAERYPGNVRVIIGYDEALAHLIYAGADFILMPS 373 (473)
T ss_pred EEEEecCccccChHHHHHHHHHHHHcCcEEEEECCCCHHHHHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHhCCEEEeCC
Confidence 99999999999999999999999877899999999976566666666666667788888888888888999999999999
Q ss_pred CCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHH
Q 008154 465 RFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLM 544 (576)
Q Consensus 465 ~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~ 544 (576)
.+|+||++.+|||+||+|+|+++.||..|.+.+.+.. .++.+|++++++|+++++++|.+++..+.++++.+.+++
T Consensus 374 ~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~----~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~ 449 (473)
T TIGR02095 374 RFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPE----AESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQ 449 (473)
T ss_pred CcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCC----CCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 9999999999999999999999999999999871100 012899999999999999999999887656899999999
Q ss_pred HHHHhhhCCHHHHHHHHHHHHHHh
Q 008154 545 RRGMEKDYTWENAAIQYEQVFEWA 568 (576)
Q Consensus 545 ~~a~~~~fs~~~~~~~y~~~y~~~ 568 (576)
+++++++|||++++++|.++|+++
T Consensus 450 ~~~~~~~fsw~~~a~~~~~~Y~~l 473 (473)
T TIGR02095 450 KNAMSQDFSWDKSAKQYVELYRSL 473 (473)
T ss_pred HHHhccCCCcHHHHHHHHHHHHhC
Confidence 999888999999999999999863
No 5
>PRK00654 glgA glycogen synthase; Provisional
Probab=100.00 E-value=7.9e-61 Score=510.75 Aligned_cols=463 Identities=42% Similarity=0.702 Sum_probs=376.7
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 145 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (576)
|||+|+|+|+.|+.++||++.++..|+++|+++||+|.|++|.|+..... .. +......+ ...+++..
T Consensus 1 m~i~~vs~e~~P~~k~GGl~~~v~~L~~~L~~~G~~V~v~~p~y~~~~~~---~~---~~~~~~~~------~~~~~~~~ 68 (466)
T PRK00654 1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAIREK---LR---DAQVVGRL------DLFTVLFG 68 (466)
T ss_pred CeEEEEEcccccCcccCcHHHHHHHHHHHHHHCCCcEEEEecCCcchhhh---hc---CceEEEEe------eeEEEEEE
Confidence 89999999999988899999999999999999999999999998653211 00 00111111 12344443
Q ss_pred --eecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHH
Q 008154 146 --YREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLA 223 (576)
Q Consensus 146 --~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~ 223 (576)
.++|+++|+++++.+..+..+|+. .++..||.+|+.++.+.+.+++. +|||||+|+|++++++.+++
T Consensus 69 ~~~~~gv~v~~v~~~~~~~~~~~y~~-----~d~~~r~~~f~~~~~~~~~~~~~------~pDiiH~h~w~~~~~~~~l~ 137 (466)
T PRK00654 69 HLEGDGVPVYLIDAPHLFDRPSGYGY-----PDNGERFAFFSWAAAEFAEGLDP------RPDIVHAHDWHTGLIPALLK 137 (466)
T ss_pred eEEcCCceEEEEeCHHHcCCCCCCCC-----cChHHHHHHHHHHHHHHHHhcCC------CCceEEECCcHHHHHHHHHH
Confidence 568999999998877666678863 48899999999999998876532 89999999999999999888
Q ss_pred hhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceecc
Q 008154 224 SKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTV 303 (576)
Q Consensus 224 ~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~v 303 (576)
... . ....++|+|+|+|+..+++.++.+....++++...+..... .....+++++.+++.||.+++|
T Consensus 138 ~~~-~-~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~ad~vitv 204 (466)
T PRK00654 138 EKY-W-RGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGL-----------EFYGQISFLKAGLYYADRVTTV 204 (466)
T ss_pred Hhh-h-ccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhh-----------hcCCcccHHHHHHHhcCcCeee
Confidence 653 1 11136899999999999998887777667766544321111 1123578999999999999999
Q ss_pred CccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCC
Q 008154 304 SKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCP 383 (576)
Q Consensus 304 S~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 383 (576)
|+.+++++.+..+++++.+.+.....++.+|+||||.+.|.|.....+..+|...++.++..++..+++.+|+++ ++.+
T Consensus 205 S~~~~~ei~~~~~~~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~-~~~~ 283 (466)
T PRK00654 205 SPTYAREITTPEFGYGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENKRALQERFGLPD-DDAP 283 (466)
T ss_pred CHHHHHHhccccCCcChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHHHHHHHHHHhCCCC-CCCc
Confidence 999999998766777777777777889999999999999998776666667877778888888899999999972 3678
Q ss_pred EEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEeC
Q 008154 384 LIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMP 463 (576)
Q Consensus 384 ~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~p 463 (576)
+|+|+||+.++||++.+++|++++.+++++|+|+|+|++.+.+..+.+.+.+..++.++.+++.++...++++||++|+|
T Consensus 284 ~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~g~~~~~~~~~~~~aDv~v~P 363 (466)
T PRK00654 284 LFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGTGDPELEEAFRALAARYPGKVGVQIGYDEALAHRIYAGADMFLMP 363 (466)
T ss_pred EEEEeeccccccChHHHHHHHHHHHhcCCEEEEEecCcHHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHhhCCEEEeC
Confidence 99999999999999999999999987789999999997655566666666666677777888777777899999999999
Q ss_pred CCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHH
Q 008154 464 SRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGL 543 (576)
Q Consensus 464 s~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~ 543 (576)
|.+|+||++.+|||+||+|+|+++.||..|.+.+.+.. .++.+|++++++|+++++++|.+++..+ .+++.+.++
T Consensus 364 S~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~----~~~~~G~lv~~~d~~~la~~i~~~l~~~-~~~~~~~~~ 438 (466)
T PRK00654 364 SRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPE----DGEATGFVFDDFNAEDLLRALRRALELY-RQPPLWRAL 438 (466)
T ss_pred CCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCC----CCCCceEEeCCCCHHHHHHHHHHHHHHh-cCHHHHHHH
Confidence 99999999999999999999999999999999871100 0128999999999999999999988755 467779999
Q ss_pred HHHHHhhhCCHHHHHHHHHHHHHHhhh
Q 008154 544 MRRGMEKDYTWENAAIQYEQVFEWASI 570 (576)
Q Consensus 544 ~~~a~~~~fs~~~~~~~y~~~y~~~~~ 570 (576)
++++++++|||++++++|.++|+++++
T Consensus 439 ~~~~~~~~fsw~~~a~~~~~lY~~~~~ 465 (466)
T PRK00654 439 QRQAMAQDFSWDKSAEEYLELYRRLLG 465 (466)
T ss_pred HHHHhccCCChHHHHHHHHHHHHHHhh
Confidence 999888899999999999999998875
No 6
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=100.00 E-value=7.9e-59 Score=499.23 Aligned_cols=468 Identities=43% Similarity=0.720 Sum_probs=390.1
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||+++|+|+.|+.++||++.++..|+++|+++||+|.|++|.|+..... ..+.......+.+...++...+++|+..
T Consensus 1 ~Il~v~~E~~p~~k~GGl~~~~~~L~~aL~~~G~~V~Vi~p~y~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (476)
T cd03791 1 KVLFVASEVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGRILDE---LRGQLLVLRLFGVPVGGRPEYVGVFELP 77 (476)
T ss_pred CEEEEEccccccccCCcHHHHHHHHHHHHHHCCCeEEEEecCCcchhhH---hccCeEEEEEEeeccCCceeEEEEEEEE
Confidence 5999999999988999999999999999999999999999999875321 1111111222345666788899999999
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhc
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 226 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~ 226 (576)
++|+++|+++++.+..+..+|+....+|.++..++..|+.++.+++..++. +|||||+|+|++++++.+++...
T Consensus 78 ~~gv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~~~~------~pDviH~hd~~t~~~~~~l~~~~ 151 (476)
T cd03791 78 VDGVPVYFLDNPDYFDRPGLYDDSGYDYEDNAERFALFSRAALELLRRLGW------KPDIIHCHDWHTGLVPALLKEKY 151 (476)
T ss_pred eCCceEEEEcChHHcCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHhcCC------CCcEEEECchHHHHHHHHHHHhh
Confidence 999999999988877665566555567889999999999999998876532 89999999999999998888764
Q ss_pred cCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChh-hhcccccccccccccccCCcCccchhHHHHHHhccceeccCc
Q 008154 227 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSE-WYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 305 (576)
Q Consensus 227 ~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~ 305 (576)
.. ....++|+|+|+|+..+++.++.......+.... .+.. ........+++++.++..||.+++||+
T Consensus 152 ~~-~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~ad~v~~vS~ 219 (476)
T cd03791 152 AD-PFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHI-----------DGLEFYGQVNFLKAGIVYADAVTTVSP 219 (476)
T ss_pred cc-ccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhh-----------cccccCCcccHHHHHHHhcCcCeecCH
Confidence 22 1224789999999998888777665544443321 1111 111224567899999999999999999
Q ss_pred cchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEE
Q 008154 306 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 385 (576)
Q Consensus 306 ~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i 385 (576)
.+++++.+..++.+++..+.....++.+|+||+|.+.|.|.....+...|....+..+..++..+++.+|++.+++.++|
T Consensus 220 ~~~~~i~~~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i 299 (476)
T cd03791 220 TYAREILTPEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLF 299 (476)
T ss_pred hHHHHhCCCCCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEE
Confidence 99999987777777777777777899999999999999988877777788877888899999999999999755688999
Q ss_pred EEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEeCCC
Q 008154 386 GFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSR 465 (576)
Q Consensus 386 ~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps~ 465 (576)
+|+||+.++||++++++|+.++.+.+++|+++|+|++...+..+.+......++.++.+++.++...++++||++++||.
T Consensus 300 ~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv~l~pS~ 379 (476)
T cd03791 300 GFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGDPEYEEALRELAARYPGRVAVLIGYDEALAHLIYAGADFFLMPSR 379 (476)
T ss_pred EEEeeccccccHHHHHHHHHHHHHcCcEEEEEecCCHHHHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhCCEEECCCC
Confidence 99999999999999999999998778999999999765566666666655677888888888888889999999999999
Q ss_pred CCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCc------ceeEeCCCCHHHHHHHHHHHHHHhhhCHHH
Q 008154 466 FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEG------TGWSFLPLSEESMLTALRFAIRTYREHKSS 539 (576)
Q Consensus 466 ~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~------~G~~~~~~d~~~la~~i~~~l~~~~~~~~~ 539 (576)
+|+||++.+|||+||+|+|+++.||+.|.+.+ +. +|++++++|+++++++|.+++..+ .+++.
T Consensus 380 ~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~----------~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~-~~~~~ 448 (476)
T cd03791 380 FEPCGLTQMYAMRYGTVPIVRATGGLADTVID----------YNEDTGEGTGFVFEGYNADALLAALRRALALY-RDPEA 448 (476)
T ss_pred CCCCcHHHHHHhhCCCCCEECcCCCccceEeC----------CcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHH-cCHHH
Confidence 99999999999999999999999999999988 55 999999999999999999998754 46899
Q ss_pred HHHHHHHHHhhhCCHHHHHHHHHHHHH
Q 008154 540 WEGLMRRGMEKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 540 ~~~~~~~a~~~~fs~~~~~~~y~~~y~ 566 (576)
+.+++++++++.|||++++++|.++|+
T Consensus 449 ~~~~~~~~~~~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 449 WRKLQRNAMAQDFSWDRSAKEYLELYR 475 (476)
T ss_pred HHHHHHHHhccCCChHHHHHHHHHHHh
Confidence 999999998889999999999999996
No 7
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=100.00 E-value=6.6e-60 Score=512.22 Aligned_cols=498 Identities=18% Similarity=0.222 Sum_probs=379.7
Q ss_pred HHHHHhHHhhhhccccCCcccchhhhhhhhhhhccCCCceEEEEeec-----cCCccccCcHHHHHhhHHHHHHhCCCcE
Q 008154 28 FLLRVYHEVIDSSKDIDGYGVKKIEDVEGEDKAQTRVSYNIVFVTAE-----AAPYSKTGGLGDVCGSLPVALAARGHRV 102 (576)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~~~s~e-----~~P~~~~GG~~~~~~~la~~l~~~G~~V 102 (576)
.|+..++.+++....|...+++.... ....+..|||||+| .+| +|+||+|+++++++|+++++|.++
T Consensus 55 ~f~~~~~~~~~~~~~y~~~~~~~~~~-------~~~~~~~~aYFs~E~gl~~~lp-iYsGGLG~LAgd~lksasdLg~P~ 126 (778)
T cd04299 55 EFLARYDRVLEDFDAYLEEPTWYQGR-------NDGEPLVAAYFSMEFGLHESLP-IYSGGLGILAGDHLKAASDLGLPL 126 (778)
T ss_pred HHHHHHHHHHHHHHHHhccCcccccc-------ccCCCCeeEEeccccccCCCCC-ccCchHHHHHHHHHHHHHhCCCCE
Confidence 34555566666555555444333310 00122346699998 578 799999999999999999999999
Q ss_pred EEEEecCCCCCCcccchhccccC----------------------ceeEEEeecCCeeEEEEEEeeecCeEEEEecCCC-
Q 008154 103 MVVSPRYFNGTAADENFTLAKDL----------------------GCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPS- 159 (576)
Q Consensus 103 ~vi~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~~~- 159 (576)
+.||..|.+|++.+..-.+.++. ...+.++++|+.+.+++|+..++++++|++|++.
T Consensus 127 vgvGllY~~GyF~Q~i~~dG~Q~e~~~~~~~~~~p~~~~~~~~G~~~~v~v~l~g~~v~~rvw~~~vg~v~lylLDtd~~ 206 (778)
T cd04299 127 VGVGLLYRQGYFRQRLDADGWQQETYPVNDFEQLPLEPVRDADGEPVRVSVELPGRTVYARVWKAQVGRVPLYLLDTDIP 206 (778)
T ss_pred EEEEeCcCCCCeEEEECCCCceeecCCCcCCCCCceEEEecCCCCeEEEEEeeCCCceEEEEEEEEcCCCCEEEecCCcc
Confidence 99999999996654432221111 3467889999999999999999999999999654
Q ss_pred ----CCC--CCCCCCCCCCCCCchHHHH---HHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHH-----HHHhh
Q 008154 160 ----YHR--PGNPYGDINGAFGDNQFRY---TLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPV-----LLASK 225 (576)
Q Consensus 160 ----~~~--~~~~y~~~~~~~~~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~-----~l~~~ 225 (576)
+.| +..+|++ |+..|+ ++|++++++++++++. +|||||+||||+++++. ++...
T Consensus 207 ~n~~~~R~iT~~LYg~------D~~~Rl~Qe~~Lg~agl~~Lr~lg~------~pdViH~ND~Haal~~lE~~R~ll~~~ 274 (778)
T cd04299 207 ENSPDDRGITDRLYGG------DQETRIQQEILLGIGGVRALRALGI------KPTVYHMNEGHAAFLGLERIRELMAEG 274 (778)
T ss_pred ccchhhcccccCCCCC------cHHHHHHHHHHHHHHHHHHHHHhCC------CCeEEEeCCCcHHHHHHHHHHHHHHHc
Confidence 555 3468986 788885 9999999999988764 79999999999999988 55432
Q ss_pred ccCCCC---CCCCcEEEEeecCCCCC--CCChhhhhh--------cCCChhhhcccccccccccccccCCcCccchhHHH
Q 008154 226 YRPHGV---YKDARSILVIHNLSHQG--VEPAATYKN--------LGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKG 292 (576)
Q Consensus 226 ~~~~~~---~~~~~~v~t~H~~~~~~--~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (576)
...+.. ..+..+|||+||+.++| .||.+++++ +|++...+... +.....+..+.+||++.
T Consensus 275 g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~~~~lgl~~~~~~~l-------g~e~~~~~~~~~nM~~l 347 (778)
T cd04299 275 GLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPYARELGLSRDRFLAL-------GRENPGDDPEPFNMAVL 347 (778)
T ss_pred CCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHHHHHcCCCHHHHhhh-------ccccccCccCceeHHHH
Confidence 111111 12468999999999999 999998843 45544443322 22211122456999999
Q ss_pred HHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCc------------
Q 008154 293 AIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDL------------ 360 (576)
Q Consensus 293 a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~------------ 360 (576)
+++.|+.+++||+.+.+-. +.++.. +...++....++..|+||||.+.|..+....+++++.+.+|
T Consensus 348 aL~~S~~vNgVS~lHg~vs-r~mf~~-~~~g~p~~~~~i~~ITNGVh~~~W~~P~~~~l~~~~~g~~w~~~~~~~~~~~~ 425 (778)
T cd04299 348 ALRLAQRANGVSRLHGEVS-REMFAG-LWPGFPVEEVPIGHVTNGVHVPTWVAPEMRELYDRYLGGDWRERPTDPELWEA 425 (778)
T ss_pred HHHhcCeeeeecHHHHHHH-HHHhhh-hhccCCcccCceeceeCCcchhhhcCHHHHHHHHHhcCcchhhccchHHHHhh
Confidence 9999999999999884322 112211 11222233557999999999999996677777777765444
Q ss_pred ----------ccchHhHHHHHHHc---------------------CCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc
Q 008154 361 ----------SGKVQCKIALQKEL---------------------GLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA 409 (576)
Q Consensus 361 ----------~~~~~~~~~~~~~~---------------------~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~ 409 (576)
..+..++..+.+.. +.+.+++.++|+|++||.++||++++++++++|.+
T Consensus 426 ~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~ 505 (778)
T cd04299 426 VDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRGASAEEIGEADDVLDPNVLTIGFARRFATYKRATLLLRDPERLKR 505 (778)
T ss_pred hcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhhhhhcCCccCCCccEEeeeecchhhhhHHHHHHHHHHHHH
Confidence 45555565554442 44556889999999999999999999999998854
Q ss_pred ------CCcEEEEEeCCChhhHHHHHHH------HH--HhcCceEEEccCChhHHHHHHhcCCEEEeCCC--CCCCcHHH
Q 008154 410 ------DDIQFVMLGSGDPQFESWMRDT------EA--TYKDKYRGWVGFNVPISHRITAGCDILLMPSR--FEPCGLNQ 473 (576)
Q Consensus 410 ------~~~~lii~G~g~~~~~~~~~~~------~~--~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps~--~E~~g~s~ 473 (576)
.++++||+|+++|.++..++.+ ++ ..+++++++++|+..+++.++++||+|++||+ +|+||++.
T Consensus 506 il~~~~~pvQ~IfaGKAhP~d~~gK~iIk~i~~~a~~p~~~~kVvfle~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSg 585 (778)
T cd04299 506 LLNDPERPVQFIFAGKAHPADEPGKELIQEIVEFSRRPEFRGRIVFLEDYDMALARHLVQGVDVWLNTPRRPLEASGTSG 585 (778)
T ss_pred HhhCCCCCeEEEEEEecCccchHHHHHHHHHHHHHhCcCCCCcEEEEcCCCHHHHHHHHhhhhhcccCCCCCCCCCccch
Confidence 5899999999998776644444 33 45679999999999999999999999999999 99999999
Q ss_pred HHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCC------------CCHHHHHHHHHHHHH-HhhhC----
Q 008154 474 LYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLP------------LSEESMLTALRFAIR-TYREH---- 536 (576)
Q Consensus 474 lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~------------~d~~~la~~i~~~l~-~~~~~---- 536 (576)
|+||.+|.+++++.+|||.|.+ + +.|||.+.+ .|.+++.+.|++.+. .+++.
T Consensus 586 MKA~~NG~LnlSvlDGww~E~~-~----------g~nGwaig~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g 654 (778)
T cd04299 586 MKAALNGGLNLSVLDGWWDEGY-D----------GENGWAIGDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGG 654 (778)
T ss_pred HHHHHcCCeeeecccCcccccc-C----------CCCceEeCCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCC
Confidence 9999999999999999999999 4 699999987 467788888887776 55553
Q ss_pred -HHHHHHHHHHHHhh---hCCHHHHHHHHHHHH
Q 008154 537 -KSSWEGLMRRGMEK---DYTWENAAIQYEQVF 565 (576)
Q Consensus 537 -~~~~~~~~~~a~~~---~fs~~~~~~~y~~~y 565 (576)
|..|.+|+++++++ .|||++|+++|.+.|
T Consensus 655 ~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~ 687 (778)
T cd04299 655 YPPGWVAMMKHSMATLGPRFSAERMVREYVERF 687 (778)
T ss_pred CCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHh
Confidence 78999999999887 999999999998754
No 8
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=100.00 E-value=4.1e-58 Score=491.55 Aligned_cols=464 Identities=19% Similarity=0.249 Sum_probs=375.6
Q ss_pred EEEEeec-----cCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccC-----------------
Q 008154 68 IVFVTAE-----AAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDL----------------- 125 (576)
Q Consensus 68 I~~~s~e-----~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~----------------- 125 (576)
|||||+| ..| +|+||+|++++++.++++++|.+.+++|..|.+|++.+..-.+.++.
T Consensus 1 ~ayf~~E~g~~~~~p-~ysGGLG~LAgd~l~saa~l~~p~~g~gl~Y~~Gyf~Q~i~~~g~Q~e~~~~~~~~~~p~~~~~ 79 (601)
T TIGR02094 1 VAYFSMEYGLHESLP-IYSGGLGVLAGDHLKSASDLGLPLVAVGLLYKQGYFRQRLDEDGWQQEAYPNNDFESLPIEKVL 79 (601)
T ss_pred CeEEeeccccCCCCC-ccCchHHHHHHHHHHHHHhCCCCeEEEEeccCCCceeEEECCCCceeecCCccccCCCceEEEe
Confidence 6899998 578 79999999999999999999999999999999996654332111111
Q ss_pred -----ceeEEEeecCCeeEEEEEEeeecCeEEEEecCC-----CCCCC--CCCCCCCCCCCCchHHHH---HHHHHHHHh
Q 008154 126 -----GCCMKICCFGGEQEIAFFHEYREGVDWVFVDHP-----SYHRP--GNPYGDINGAFGDNQFRY---TLLCYAACE 190 (576)
Q Consensus 126 -----~~~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~~-----~~~~~--~~~y~~~~~~~~~~~~r~---~~~~~~~~~ 190 (576)
...+.++++|+...+++|+..++++++|+++++ .+.|. ..+|++ |...|+ .+|+.++++
T Consensus 80 ~~~g~~~~~~v~i~g~~~~~rlw~~~~~~v~lylld~~~~~n~~~~R~it~~LY~~------D~~~R~~Qe~fl~~a~l~ 153 (601)
T TIGR02094 80 DTDGKWLKISVRIRGRDVYAKVWRVQVGRVPLYLLDTNIPENSEDDRWITGRLYGG------DKEMRIAQEIVLGIGGVR 153 (601)
T ss_pred cCCCCeEEEEEecCCcEEEEEEEEEEeCCCCEEEecCCCcccchhhcCccCCCCCC------CHHHHHHHHHHHHHHHHH
Confidence 234788889999999999999999999999966 45553 368985 566777 999999999
Q ss_pred hcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhc----cCCCCC---CCCcEEEEeecCCCCCC--CChhhhhh----
Q 008154 191 APLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY----RPHGVY---KDARSILVIHNLSHQGV--EPAATYKN---- 257 (576)
Q Consensus 191 ~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~----~~~~~~---~~~~~v~t~H~~~~~~~--~~~~~~~~---- 257 (576)
.++.++. +|||||+||||+++++.++.+.. ..+..+ .+..+|||+||+.++|. |+.+++..
T Consensus 154 ~l~~l~~------~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~ 227 (601)
T TIGR02094 154 ALRALGI------DPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGD 227 (601)
T ss_pred HHHHcCC------CceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhh
Confidence 9987754 89999999999999988864321 111111 14679999999999996 99888842
Q ss_pred ----cCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeE
Q 008154 258 ----LGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNG 333 (576)
Q Consensus 258 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~v 333 (576)
++++...+....... + ...+.+||++.++..||.|++||+.+++.. ...++. +...+.....++..
T Consensus 228 ~~~~~gl~~~~~~~~~~~~-------~-~~~~~vnm~~lai~~S~~vngVS~lh~~v~-~~l~~~-l~~~~~~~~~~i~g 297 (601)
T TIGR02094 228 YAANLGLPREQLLALGREN-------P-DDPEPFNMTVLALRLSRIANGVSKLHGEVS-RKMWQF-LYPGYEEEEVPIGY 297 (601)
T ss_pred hhhHhCCCHHHHHhhhhhc-------c-CccCceeHHHHHHHhCCeeeeecHHHHHHH-HHHHHh-hhhhcccccCCccc
Confidence 455555543322211 1 113568999999999999999999988732 111111 23333444567999
Q ss_pred ecCCCCCCCCCCCCCccccccCCcCC----------------------cccchHhHHHHHH-------------------
Q 008154 334 ITNGIDITEWNPSSDEHIASHYSIDD----------------------LSGKVQCKIALQK------------------- 372 (576)
Q Consensus 334 i~nGvd~~~~~~~~~~~l~~~~~~~~----------------------~~~~~~~~~~~~~------------------- 372 (576)
|+||||...|.|+....++.+|.+++ |..+..++..+.+
T Consensus 298 ItNGId~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~ 377 (601)
T TIGR02094 298 VTNGVHNPTWVAPELRDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAI 377 (601)
T ss_pred eeCCccccccCCHHHHHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchh
Confidence 99999999999999999999999988 4677888877777
Q ss_pred --HcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc------CCcEEEEEeCCChh------hHHHHHHHHHH--hc
Q 008154 373 --ELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA------DDIQFVMLGSGDPQ------FESWMRDTEAT--YK 436 (576)
Q Consensus 373 --~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~------~~~~lii~G~g~~~------~~~~~~~~~~~--~~ 436 (576)
..|++.+++.+++++++||..+||+++++++++++.+ .++++||+|+|+|. .......+++. .+
T Consensus 378 ~~~~gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~ 457 (601)
T TIGR02094 378 LMATDRFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHPADGEGKEIIQRIVEFSKRPEFR 457 (601)
T ss_pred hhhhccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcccchHHHHHHHHHHHHhcccCC
Confidence 4566667899999999999999999999999999863 58999999999876 55556666665 67
Q ss_pred CceEEEccCChhHHHHHHhcCCEEEe-CCC-CCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEe
Q 008154 437 DKYRGWVGFNVPISHRITAGCDILLM-PSR-FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSF 514 (576)
Q Consensus 437 ~~~~~~~~~~~~~~~~ll~~~Dv~v~-ps~-~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~ 514 (576)
++++++++|+..+++.++++||+|++ ||+ +|+||++.|.||.+|.+.+++.+||+.|... +.|||.|
T Consensus 458 ~kv~f~~~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~~-----------~~nGf~f 526 (601)
T TIGR02094 458 GRIVFLENYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGYD-----------GDNGWAI 526 (601)
T ss_pred CCEEEEcCCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccCC-----------CCcEEEE
Confidence 89999999999999999999999999 998 9999999999999999999999999999984 5899999
Q ss_pred CC------------CCHHHHHHHHHHHH-HHhhhC-----HHHHHHHHHHHHhh---hCCHHHHHHHHHHHH
Q 008154 515 LP------------LSEESMLTALRFAI-RTYREH-----KSSWEGLMRRGMEK---DYTWENAAIQYEQVF 565 (576)
Q Consensus 515 ~~------------~d~~~la~~i~~~l-~~~~~~-----~~~~~~~~~~a~~~---~fs~~~~~~~y~~~y 565 (576)
.+ .|++++.++|++.+ ..++++ |..|.++++++|++ .|||++|+++|.+.|
T Consensus 527 ~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 527 GDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred CCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 84 78999999999988 555554 66799999999987 799999999999987
No 9
>PLN02316 synthase/transferase
Probab=100.00 E-value=3.8e-56 Score=491.29 Aligned_cols=446 Identities=35% Similarity=0.527 Sum_probs=349.6
Q ss_pred hhccCCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCee
Q 008154 59 KAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQ 138 (576)
Q Consensus 59 ~~~~~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (576)
.....++|||+|+|+|+.|+.++||++.+++.|+++|+++||+|.||+|.|+..... ...+... ...+.....
T Consensus 581 ~~~~~~pM~Il~VSsE~~P~aKvGGLgDVV~sLp~ALa~~Gh~V~VitP~Y~~i~~~-----~~~~~~~--~~~~~~~~~ 653 (1036)
T PLN02316 581 GIAKEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNLS-----HVKDLHY--QRSYSWGGT 653 (1036)
T ss_pred CCCCCCCcEEEEEEcccCCCCCcCcHHHHHHHHHHHHHHcCCEEEEEecCCcccchh-----hcccceE--EEEeccCCE
Confidence 444467899999999999998999999999999999999999999999999752110 0000111 112222334
Q ss_pred EEEEEEeeecCeEEEEecCCC-CCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccch
Q 008154 139 EIAFFHEYREGVDWVFVDHPS-YHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGL 217 (576)
Q Consensus 139 ~~~~~~~~~~gv~v~~l~~~~-~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~ 217 (576)
.++++...++||++|+++++. +..+..+|+ |.|+..||.+|+.++++.+...+. +|||||+|+|++++
T Consensus 654 ~~~v~~~~~~GV~vyfl~~~~~~F~r~~~Yg-----~~Dd~~RF~~F~~Aale~l~~~~~------~PDIIHaHDW~tal 722 (1036)
T PLN02316 654 EIKVWFGKVEGLSVYFLEPQNGMFWAGCVYG-----CRNDGERFGFFCHAALEFLLQSGF------HPDIIHCHDWSSAP 722 (1036)
T ss_pred EEEEEEEEECCcEEEEEeccccccCCCCCCC-----chhHHHHHHHHHHHHHHHHHhcCC------CCCEEEECCChHHH
Confidence 678889899999999999753 444455775 358999999999999998876542 89999999999999
Q ss_pred HHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhc
Q 008154 218 VPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTA 297 (576)
Q Consensus 218 ~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a 297 (576)
++.+++......+ ..++|+|+|+|+..++ .++.+.++..|
T Consensus 723 va~llk~~~~~~~-~~~~p~V~TiHnl~~~---------------------------------------~n~lk~~l~~A 762 (1036)
T PLN02316 723 VAWLFKDHYAHYG-LSKARVVFTIHNLEFG---------------------------------------ANHIGKAMAYA 762 (1036)
T ss_pred HHHHHHHhhhhhc-cCCCCEEEEeCCcccc---------------------------------------hhHHHHHHHHC
Confidence 9998876543222 2568999999975321 12345678899
Q ss_pred cceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCc-ccchHhHHHHHHHcCC
Q 008154 298 DRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDL-SGKVQCKIALQKELGL 376 (576)
Q Consensus 298 d~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~i 376 (576)
|.|++||+.+++++.. ...+.....++.+|+||||++.|.|.....+..+|...++ .++..++..+++.+|+
T Consensus 763 D~ViTVS~tya~EI~~-------~~~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL 835 (1036)
T PLN02316 763 DKATTVSPTYSREVSG-------NSAIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGL 835 (1036)
T ss_pred CEEEeCCHHHHHHHHh-------ccCcccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCC
Confidence 9999999999988753 1112333578999999999999998876666666766555 3566778889999999
Q ss_pred CCCCCCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCC-hhhHHHHHHHHHHh----cCceEEEccCChhHHH
Q 008154 377 PIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGD-PQFESWMRDTEATY----KDKYRGWVGFNVPISH 451 (576)
Q Consensus 377 ~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 451 (576)
+. ++.++|+|+||+.++||+++|++|+.++.+++++|+|+|+|+ +.++..++.+...+ ..++.+..+++..+..
T Consensus 836 ~~-~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~~~qlVIvG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g~~de~lah 914 (1036)
T PLN02316 836 KQ-ADLPLVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFVNLANQLHSSHHDRARLCLTYDEPLSH 914 (1036)
T ss_pred Cc-ccCeEEEEEeccccccCHHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHHHHHHHHHhCccCCCeEEEEecCCHHHHH
Confidence 83 367899999999999999999999999877789999999984 22344444444433 3567777778877777
Q ss_pred HHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccC---CCCCcceeEeCCCCHHHHHHHHHH
Q 008154 452 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFARE---GSGEGTGWSFLPLSEESMLTALRF 528 (576)
Q Consensus 452 ~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~---~~~~~~G~~~~~~d~~~la~~i~~ 528 (576)
.+|++||++|+||++|+||++.||||+||+|+|++++||.+|.|.+.+..... ...+.||+++++.|+++++.+|.+
T Consensus 915 ~iyaaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~r 994 (1036)
T PLN02316 915 LIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNR 994 (1036)
T ss_pred HHHHhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCCCCHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999874321100 001369999999999999999999
Q ss_pred HHHHhhhCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhh
Q 008154 529 AIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASI 570 (576)
Q Consensus 529 ~l~~~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y~~~~~ 570 (576)
++..+.+.+..+.+++++++.+.|||++++++|+++|+.+.+
T Consensus 995 aL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a~~ 1036 (1036)
T PLN02316 995 AISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSARK 1036 (1036)
T ss_pred HHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhC
Confidence 998765567777889999899999999999999999998753
No 10
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.4e-55 Score=450.72 Aligned_cols=481 Identities=38% Similarity=0.607 Sum_probs=409.8
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 145 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (576)
|||++++.|..|++++||++-+++.+.++|.+.|++|.|+.|.|+.-+ ..+++.+.......+...+.....-+...
T Consensus 1 M~Il~v~~E~~p~vK~GGLaDv~~alpk~L~~~g~~v~v~lP~y~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (487)
T COG0297 1 MKILFVASEIFPFVKTGGLADVVGALPKALAKRGVDVRVLLPSYPKVQ---KEWRDLLKVVGKFGVLKGGRAQLFIVKEY 77 (487)
T ss_pred CcceeeeeeecCccccCcHHHHHHHhHHHHHhcCCeEEEEcCCchhhh---hhhccccceeeEeeeeecccceEEEEEee
Confidence 899999999999999999999999999999999999999999997422 23333322223333334344434433333
Q ss_pred eecC-eEEEEecCCCCCCC--CCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHH
Q 008154 146 YREG-VDWVFVDHPSYHRP--GNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLL 222 (576)
Q Consensus 146 ~~~g-v~v~~l~~~~~~~~--~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l 222 (576)
..++ +++++++++.+..+ ...|+ |.|+.+||+.|+.++++.+....+. + .|||||+||||+++++.++
T Consensus 78 ~~~~~v~~~lid~~~~f~r~~~~~~~-----~~d~~~Rf~~F~~a~~~~~~~~~~~-~---~pDIvH~hDWqt~L~~~~l 148 (487)
T COG0297 78 GKDGGVDLYLIDNPALFKRPDSTLYG-----YYDNAERFAFFSLAAAELAPLGLIS-W---LPDIVHAHDWQTGLLPAYL 148 (487)
T ss_pred cccCCCcEEEecChhhcCccccccCC-----CCcHHHHHHHHHHHHHHHhhhcCCC-C---CCCEEEeecHHHHHHHHHH
Confidence 3233 99999998876554 23443 4599999999999999987655543 4 7999999999999999999
Q ss_pred HhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceec
Q 008154 223 ASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLT 302 (576)
Q Consensus 223 ~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~ 302 (576)
+.... ....+|+|||+|+..++|.|+......++++...+....-. +....+++|..+..||.|++
T Consensus 149 k~~~~---~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~-----------~~~~~~~lK~gi~~ad~vtt 214 (487)
T COG0297 149 KQRYR---SGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLE-----------FYGQISFLKGGLYYADAVTT 214 (487)
T ss_pred hhccc---ccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceee-----------ecCcchhhhhhheeccEEEE
Confidence 98631 01568999999999999999966668899987666521111 13557899999999999999
Q ss_pred cCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCC
Q 008154 303 VSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDC 382 (576)
Q Consensus 303 vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 382 (576)
||+.+++++.++.+++++++.+.....++..|.||+|...|.|.....+..+|....|.++..++..++..+|++.+.+.
T Consensus 215 VSptYa~Ei~t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~gL~~~~~~ 294 (487)
T COG0297 215 VSPTYAGEIYTPEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLGLDVDLPG 294 (487)
T ss_pred ECHHHHHhhccccccccchhhhhhccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999998888999999999999999999998888899999998899999999999999977788
Q ss_pred CEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEe
Q 008154 383 PLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLM 462 (576)
Q Consensus 383 ~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ 462 (576)
++++++||+..+||++++++++..+.+..+++++.|.|++.++.....+++..+.++....++++++++.+++++|++++
T Consensus 295 pl~~~vsRl~~QKG~dl~~~~i~~~l~~~~~~vilG~gd~~le~~~~~la~~~~~~~~~~i~~~~~la~~i~agaD~~lm 374 (487)
T COG0297 295 PLFGFVSRLTAQKGLDLLLEAIDELLEQGWQLVLLGTGDPELEEALRALASRHPGRVLVVIGYDEPLAHLIYAGADVILM 374 (487)
T ss_pred cEEEEeeccccccchhHHHHHHHHHHHhCceEEEEecCcHHHHHHHHHHHHhcCceEEEEeeecHHHHHHHHhcCCEEEe
Confidence 99999999999999999999999999988999999999989999999999988888888999999999999999999999
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHH
Q 008154 463 PSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEG 542 (576)
Q Consensus 463 ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~ 542 (576)
||++||||++-|+||..|+++|+..+||..|.|.+.+... .++..+|+.+.+.++++++.+|.+++..+..++..|+.
T Consensus 375 PSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~--~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~~w~~ 452 (487)
T COG0297 375 PSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWL--IQGVGTGFLFLQTNPDHLANALRRALVLYRAPPLLWRK 452 (487)
T ss_pred CCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchh--ccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHHHHHH
Confidence 9999999999999999999999999999999999865442 23468999999999999999999999887666666999
Q ss_pred HHHHHHhhhCCHHHHHHHHHHHHHHhhhCCCC
Q 008154 543 LMRRGMEKDYTWENAAIQYEQVFEWASIDPPY 574 (576)
Q Consensus 543 ~~~~a~~~~fs~~~~~~~y~~~y~~~~~~~~~ 574 (576)
+.++++...|+|+..+.+|.+.|+.++..+-.
T Consensus 453 ~~~~~m~~d~sw~~sa~~y~~lY~~~~~~~~~ 484 (487)
T COG0297 453 VQPNAMGADFSWDLSAKEYVELYKPLLSKPFW 484 (487)
T ss_pred HHHhhcccccCchhHHHHHHHHHHHHhccccc
Confidence 99999999999999999999999999876543
No 11
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=100.00 E-value=4e-40 Score=341.61 Aligned_cols=455 Identities=16% Similarity=0.160 Sum_probs=280.9
Q ss_pred EEEEeeccCCccccCcHHHHHhhHHHHHHh-CCCcEEEEEecCCCCCCcccchhccccC--ce-eEEEeecCCeeEEEEE
Q 008154 68 IVFVTAEAAPYSKTGGLGDVCGSLPVALAA-RGHRVMVVSPRYFNGTAADENFTLAKDL--GC-CMKICCFGGEQEIAFF 143 (576)
Q Consensus 68 I~~~s~e~~P~~~~GG~~~~~~~la~~l~~-~G~~V~vi~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~ 143 (576)
+..+|+|.++ ++||+.+++..-|+.+++ .|.+..+|||..++... ..++..... .. ...-....+++.++++
T Consensus 4 lfE~swEV~N--KVGGIyTVi~tka~~~~~~~~d~y~~iGP~~~~~~~--~e~e~~~~~~~~~~~~~~~~~~~g~~v~~G 79 (590)
T cd03793 4 LFEVAWEVAN--KVGGIYTVIKSKAPVTVEEWGDRYCLIGPYNEAKAR--TEVEILEPPNPALRQALDRMRSRGIKVHFG 79 (590)
T ss_pred EEEEeehhhc--cCCCeeeeeecCcHHHHHHhCCeEEEECCCCccccC--CccccCCCCchHHHHHHHHHHhCCCeEEEe
Confidence 7889999998 699999999999999998 79999999998764221 112111110 00 0001223567888999
Q ss_pred EeeecC-eEEEEecCCC-CCCCCCCCCCCC-----------CCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEe
Q 008154 144 HEYREG-VDWVFVDHPS-YHRPGNPYGDIN-----------GAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLV 210 (576)
Q Consensus 144 ~~~~~g-v~v~~l~~~~-~~~~~~~y~~~~-----------~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~ 210 (576)
+|.++| +.++++|..+ +...+++++..| ++| ++...|.++...+++.+...- . ..++||+|+
T Consensus 80 rW~i~G~P~viL~D~~~~~~~~~~~~~~lW~~~~i~s~~~~~d~-nea~~fgy~~~~~i~~~~~~~-~---~~~~dViH~ 154 (590)
T cd03793 80 RWLIEGYPKVVLFDIGSAAWKLDEWKGELWELCGIGSPEGDRET-NDAIIFGFLVAWFLGEFAEQF-D---DEPAVVAHF 154 (590)
T ss_pred EEEcCCCCeEEEEeCchhhhhHHHHHHHHHHHcCCCCCCCCCcc-hHHHHHHHHHHHHHHHHHhhc-c---CCCCeEEEE
Confidence 999998 8888998544 333444554444 455 556667777776666554331 1 126899999
Q ss_pred CCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhh-cCCChhhhcccccccccccccccCCcCccchh
Q 008154 211 NDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKN-LGLPSEWYGALEWVFPTWARTHALDTGEAVNV 289 (576)
Q Consensus 211 ~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (576)
|||+++.....++++. +.+|+|||+|++.. |+ .+... .++... +......- ..++ ..-.....+
T Consensus 155 HeWm~g~a~~~lK~~~------~~VptVfTtHAT~~-GR---~l~~g~~~~y~~-l~~~~~d~-eA~~---~~I~~r~~i 219 (590)
T cd03793 155 HEWQAGVGLPLLRKRK------VDVSTIFTTHATLL-GR---YLCAGNVDFYNN-LDYFDVDK-EAGK---RGIYHRYCI 219 (590)
T ss_pred cchhHhHHHHHHHHhC------CCCCEEEEeccccc-cc---ccccCCcccchh-hhhcchhh-hhhc---ccchHHHHH
Confidence 9999999988888654 68999999998741 11 00000 000000 00000000 0000 001233468
Q ss_pred HHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHh---
Q 008154 290 LKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQC--- 366 (576)
Q Consensus 290 ~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~--- 366 (576)
|+.+.+.||++++||+.++.++. .+++.++++ |||||+|...|.+.... ....-.++..-
T Consensus 220 E~~aa~~Ad~fttVS~it~~E~~---------~Ll~~~pd~--ViPNGid~~~f~~~~e~------~~~~~~~k~ki~~f 282 (590)
T cd03793 220 ERAAAHCAHVFTTVSEITAYEAE---------HLLKRKPDV--VLPNGLNVKKFSALHEF------QNLHAQSKEKINEF 282 (590)
T ss_pred HHHHHhhCCEEEECChHHHHHHH---------HHhCCCCCE--EeCCCcchhhcccchhh------hhhhHHhhhhhhHH
Confidence 99999999999999999999974 466777775 99999999988765321 00000011111
Q ss_pred -HHHHHHHcCCCCCCCCCEEEE-eccccc-ccCHHHHHHHHHhhhc------CC---cEEEEE-eCCC----------hh
Q 008154 367 -KIALQKELGLPIRPDCPLIGF-IGRLDY-QKGIDLIRLAAPEILA------DD---IQFVML-GSGD----------PQ 423 (576)
Q Consensus 367 -~~~~~~~~~i~~~~~~~~i~~-~Gr~~~-~Kg~~~ll~a~~~L~~------~~---~~lii~-G~g~----------~~ 423 (576)
+..++..++++ ++..+++| +||++. +||++.||+|+.+|.. .+ +-|+|+ +... +-
T Consensus 283 ~~~~~~~~~~~~--~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~ 360 (590)
T cd03793 283 VRGHFYGHYDFD--LDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAV 360 (590)
T ss_pred HHHHHhhhcCCC--CCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHH
Confidence 12345556665 45566666 899997 9999999999999865 12 233332 2210 10
Q ss_pred ---hHHHHHHH----HHH--------------------------------------------------------------
Q 008154 424 ---FESWMRDT----EAT-------------------------------------------------------------- 434 (576)
Q Consensus 424 ---~~~~~~~~----~~~-------------------------------------------------------------- 434 (576)
..+....+ .++
T Consensus 361 ~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l 440 (590)
T cd03793 361 RKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQL 440 (590)
T ss_pred HHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcC
Confidence 00011110 000
Q ss_pred -----hcCceEEEccC---Ch----hHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccc
Q 008154 435 -----YKDKYRGWVGF---NV----PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFA 502 (576)
Q Consensus 435 -----~~~~~~~~~~~---~~----~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~ 502 (576)
.++++++...| .+ .....++++||++|+||++|+||++++||||||+|+|+|+.+|+.+++.+...
T Consensus 441 ~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v~-- 518 (590)
T cd03793 441 FNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIE-- 518 (590)
T ss_pred cCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhHHHhc--
Confidence 01223333222 11 11336789999999999999999999999999999999999999655553110
Q ss_pred cCCCCCcceeEeCCCC---HHHHHHHHHHHHHHhhhCHHHHHHHHHHH----HhhhCCHHHHHHHHHHHHHHhhhC
Q 008154 503 REGSGEGTGWSFLPLS---EESMLTALRFAIRTYREHKSSWEGLMRRG----MEKDYTWENAAIQYEQVFEWASID 571 (576)
Q Consensus 503 ~~~~~~~~G~~~~~~d---~~~la~~i~~~l~~~~~~~~~~~~~~~~a----~~~~fs~~~~~~~y~~~y~~~~~~ 571 (576)
+++..|+.+.+.+ ..+-++.|.+.+..+.+ .+.++++..+. .++.|+|++++..|.++|+.++++
T Consensus 519 ---~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~-~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~Al~~ 590 (590)
T cd03793 519 ---DPESYGIYIVDRRFKSPDESVQQLTQYMYEFCQ-LSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLALSR 590 (590)
T ss_pred ---cCCCceEEEecCCccchHHHHHHHHHHHHHHhC-CcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhC
Confidence 0124577775332 23334444444544432 23344444332 467899999999999999988753
No 12
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=100.00 E-value=4.5e-38 Score=333.58 Aligned_cols=391 Identities=19% Similarity=0.180 Sum_probs=251.5
Q ss_pred ccCcHHHHHhhHHHHHHhCCC--cEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEeeecCeEEEEecC
Q 008154 80 KTGGLGDVCGSLPVALAARGH--RVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDH 157 (576)
Q Consensus 80 ~~GG~~~~~~~la~~l~~~G~--~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~ 157 (576)
..||+++++.+++++|+++|| +|+|+|..++.+...+. +.. .++...+|+++++++.
T Consensus 24 ~~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~-~~~--------------------~~~~~~~gv~v~r~~~ 82 (439)
T TIGR02472 24 DTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPD-YAQ--------------------PIERIAPGARIVRLPF 82 (439)
T ss_pred CCCCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCc-cCC--------------------CeeEeCCCcEEEEecC
Confidence 379999999999999999997 99999977654321110 000 1123347899999863
Q ss_pred CCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhccCCCCCCCCcE
Q 008154 158 PSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARS 237 (576)
Q Consensus 158 ~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 237 (576)
.+.. +... .+....+..+...+.+.++..+ .+|||||+|.+.++++..+++.. .++|+
T Consensus 83 ~~~~-----~~~~----~~~~~~~~~~~~~l~~~~~~~~------~~~DvIH~h~~~~~~~~~~~~~~-------~~~p~ 140 (439)
T TIGR02472 83 GPRR-----YLRK----ELLWPYLDELADNLLQHLRQQG------HLPDLIHAHYADAGYVGARLSRL-------LGVPL 140 (439)
T ss_pred CCCC-----CcCh----hhhhhhHHHHHHHHHHHHHHcC------CCCCEEEEcchhHHHHHHHHHHH-------hCCCE
Confidence 2211 1000 0001111223333333333221 16999999998877776666553 46899
Q ss_pred EEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCccchhhhccccCC
Q 008154 238 ILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGG 317 (576)
Q Consensus 238 v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~ 317 (576)
|+|.|+..... .......+.....+.. + +.....+.+++.+++.+|.++++|+....+..
T Consensus 141 V~t~H~~~~~~---~~~~~~~~~~~~~~~~----~--------~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~----- 200 (439)
T TIGR02472 141 IFTGHSLGREK---RRRLLAAGLKPQQIEK----Q--------YNISRRIEAEEETLAHASLVITSTHQEIEEQY----- 200 (439)
T ss_pred EEecccccchh---hhhcccCCCChhhhhh----h--------cchHHHHHHHHHHHHhCCEEEECCHHHHHHHH-----
Confidence 99999752110 0000000111111000 0 00012234577889999999999864332210
Q ss_pred cchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEEEecccccccCH
Q 008154 318 YGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGI 397 (576)
Q Consensus 318 ~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~ 397 (576)
......+..++.+||||||.+.|.+..... .....+... +..+.+ ++..+|+|+||+.+.||+
T Consensus 201 ---~~~~~~~~~ki~vIpnGvd~~~f~~~~~~~-----------~~~~~~~~~-~~~~~~--~~~~~i~~vGrl~~~Kg~ 263 (439)
T TIGR02472 201 ---ALYDSYQPERMQVIPPGVDLSRFYPPQSSE-----------ETSEIDNLL-APFLKD--PEKPPILAISRPDRRKNI 263 (439)
T ss_pred ---HhccCCCccceEEECCCcChhhcCCCCccc-----------cchhHHHHH-Hhhccc--cCCcEEEEEcCCcccCCH
Confidence 011124567899999999998887643210 001111122 233333 467899999999999999
Q ss_pred HHHHHHHHhhhc--CCcEEE-EEeCCChh--hHH----H----HHHHHH-HhcCceEEEccC-ChhHHHHHHhcC----C
Q 008154 398 DLIRLAAPEILA--DDIQFV-MLGSGDPQ--FES----W----MRDTEA-TYKDKYRGWVGF-NVPISHRITAGC----D 458 (576)
Q Consensus 398 ~~ll~a~~~L~~--~~~~li-i~G~g~~~--~~~----~----~~~~~~-~~~~~~~~~~~~-~~~~~~~ll~~~----D 458 (576)
+.|++|++++.. +..+++ ++|+++.. .+. . .+.+.+ .+.+++. +.++ +.+.+..+|+.+ |
T Consensus 264 ~~li~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~-f~g~~~~~~~~~~~~~a~~~~D 342 (439)
T TIGR02472 264 PSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVA-YPKHHRPDDVPELYRLAARSRG 342 (439)
T ss_pred HHHHHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEE-ecCCCCHHHHHHHHHHHhhcCC
Confidence 999999986422 234443 56877421 111 1 111111 1334444 4443 455666888866 9
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHH
Q 008154 459 ILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKS 538 (576)
Q Consensus 459 v~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~ 538 (576)
++|+||.+|+||++++||||||+|||+|+.||..|++.+ +.+|++++++|+++++++|.+++. |++
T Consensus 343 v~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~----------~~~G~lv~~~d~~~la~~i~~ll~----~~~ 408 (439)
T TIGR02472 343 IFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIAN----------CRNGLLVDVLDLEAIASALEDALS----DSS 408 (439)
T ss_pred EEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcC----------CCcEEEeCCCCHHHHHHHHHHHHh----CHH
Confidence 999999999999999999999999999999999999988 899999999999999999999976 788
Q ss_pred HHHHHHHHH---HhhhCCHHHHHHHHHHHH
Q 008154 539 SWEGLMRRG---MEKDYTWENAAIQYEQVF 565 (576)
Q Consensus 539 ~~~~~~~~a---~~~~fs~~~~~~~y~~~y 565 (576)
.+.++++++ +.++|||++++++|.+++
T Consensus 409 ~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 409 QWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 888888877 457899999999999875
No 13
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=100.00 E-value=4.8e-38 Score=331.09 Aligned_cols=386 Identities=18% Similarity=0.207 Sum_probs=266.4
Q ss_pred EEEEeeccCCcc-----ccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEE
Q 008154 68 IVFVTAEAAPYS-----KTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAF 142 (576)
Q Consensus 68 I~~~s~e~~P~~-----~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (576)
|++++....|.. ..||+++++.+++++|+++||+|+++++....... ..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~GG~e~~v~~la~~L~~~G~~V~v~~~~~~~~~~--~~------------------------ 54 (405)
T TIGR03449 1 VAMISMHTSPLQQPGTGDAGGMNVYILETATELARRGIEVDIFTRATRPSQP--PV------------------------ 54 (405)
T ss_pred CeEEeccCCccccCCCcCCCCceehHHHHHHHHhhCCCEEEEEecccCCCCC--Cc------------------------
Confidence 566777666631 26999999999999999999999999976432110 00
Q ss_pred EEeeecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHH-hhcccCCCCCCCCCCccEEEeCCCccchHHHH
Q 008154 143 FHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAAC-EAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVL 221 (576)
Q Consensus 143 ~~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~ 221 (576)
....+|++++.++..++... +. ......+..+....+ ..+... ..+|||||+|.+.+++.+.+
T Consensus 55 -~~~~~~~~v~~~~~~~~~~~----~~-----~~~~~~~~~~~~~~~~~~~~~~------~~~~Diih~h~~~~~~~~~~ 118 (405)
T TIGR03449 55 -VEVAPGVRVRNVVAGPYEGL----DK-----EDLPTQLCAFTGGVLRAEARHE------PGYYDLIHSHYWLSGQVGWL 118 (405)
T ss_pred -cccCCCcEEEEecCCCcccC----CH-----HHHHHHHHHHHHHHHHHHhhcc------CCCCCeEEechHHHHHHHHH
Confidence 11235788887754332210 00 000011111222222 222211 11799999999777666666
Q ss_pred HHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhcccee
Q 008154 222 LASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLL 301 (576)
Q Consensus 222 l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~ 301 (576)
+++. .++|+|+|.|+.... .. .++... ..... ......++..++.+|.++
T Consensus 119 ~~~~-------~~~p~v~t~h~~~~~-----~~-~~~~~~-~~~~~----------------~~~~~~e~~~~~~~d~vi 168 (405)
T TIGR03449 119 LRDR-------WGVPLVHTAHTLAAV-----KN-AALADG-DTPEP----------------EARRIGEQQLVDNADRLI 168 (405)
T ss_pred HHHh-------cCCCEEEeccchHHH-----HH-HhccCC-CCCch----------------HHHHHHHHHHHHhcCeEE
Confidence 5543 468999999975210 00 000000 00000 000123456788999999
Q ss_pred ccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCC
Q 008154 302 TVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPD 381 (576)
Q Consensus 302 ~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 381 (576)
++|+...+.+. ..+.....++.+||||+|.+.|.+.. ....++.++++ ++
T Consensus 169 ~~s~~~~~~~~---------~~~~~~~~ki~vi~ngvd~~~~~~~~-------------------~~~~~~~~~~~--~~ 218 (405)
T TIGR03449 169 ANTDEEARDLV---------RHYDADPDRIDVVAPGADLERFRPGD-------------------RATERARLGLP--LD 218 (405)
T ss_pred ECCHHHHHHHH---------HHcCCChhhEEEECCCcCHHHcCCCc-------------------HHHHHHhcCCC--CC
Confidence 99998776653 22344567899999999988876543 33456677776 56
Q ss_pred CCEEEEecccccccCHHHHHHHHHhhhc--CC--cEEEEEeCCC----hhhHHHHHHHHHH-hcCceEEEccC-ChhHHH
Q 008154 382 CPLIGFIGRLDYQKGIDLIRLAAPEILA--DD--IQFVMLGSGD----PQFESWMRDTEAT-YKDKYRGWVGF-NVPISH 451 (576)
Q Consensus 382 ~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~--~~lii~G~g~----~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~ 451 (576)
.++|+|+||+.+.||++.+++|+.++.+ ++ ++|+|+|.++ +..++..+.+.+. ...++. +.++ +.+...
T Consensus 219 ~~~i~~~G~l~~~K~~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~-~~g~~~~~~~~ 297 (405)
T TIGR03449 219 TKVVAFVGRIQPLKAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSGLATPDALIELAAELGIADRVR-FLPPRPPEELV 297 (405)
T ss_pred CcEEEEecCCCcccCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCcchHHHHHHHHHHHcCCCceEE-ECCCCCHHHHH
Confidence 7899999999999999999999999865 34 9999999642 2223333333332 223444 4454 556677
Q ss_pred HHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHH
Q 008154 452 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 452 ~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
.+++.||++++||..|++|++++|||++|+|||+++.|+..|.+.+ +.+|++++++|+++++++|.+++.
T Consensus 298 ~~l~~ad~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~----------~~~g~~~~~~d~~~la~~i~~~l~ 367 (405)
T TIGR03449 298 HVYRAADVVAVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAVAD----------GETGLLVDGHDPADWADALARLLD 367 (405)
T ss_pred HHHHhCCEEEECCCCCCcChHHHHHHHcCCCEEEecCCCcHhhhcc----------CCceEECCCCCHHHHHHHHHHHHh
Confidence 8999999999999999999999999999999999999999999988 899999999999999999999875
Q ss_pred HhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHhhh
Q 008154 532 TYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWASI 570 (576)
Q Consensus 532 ~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~~~~ 570 (576)
+++.+.+++.++ ..++|||++++++|.++|.+++.
T Consensus 368 ----~~~~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~~~~ 404 (405)
T TIGR03449 368 ----DPRTRIRMGAAAVEHAAGFSWAATADGLLSSYRDALA 404 (405)
T ss_pred ----CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence 777888887776 34689999999999999998764
No 14
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=7e-38 Score=345.44 Aligned_cols=450 Identities=14% Similarity=0.095 Sum_probs=282.6
Q ss_pred hhccCCCceEEEEeeccCC---------ccccCcHHHHHhhHHHHHHhCC--CcEEEEEecCCCCCCcccchhccccCce
Q 008154 59 KAQTRVSYNIVFVTAEAAP---------YSKTGGLGDVCGSLPVALAARG--HRVMVVSPRYFNGTAADENFTLAKDLGC 127 (576)
Q Consensus 59 ~~~~~~~mkI~~~s~e~~P---------~~~~GG~~~~~~~la~~l~~~G--~~V~vi~~~~~~~~~~~~~~~~~~~~~~ 127 (576)
....+++|.|+++|...+| ..-.||..+|+.+||++|+++| |+|.++|-......... .|.+..+...
T Consensus 163 ~~~~~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~-~y~~p~e~~~ 241 (1050)
T TIGR02468 163 DQQKEKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDW-SYGEPTEMLT 241 (1050)
T ss_pred hhcccCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCcccccc-ccCCcccccc
Confidence 3344568999999987443 1347999999999999999998 89999996543211111 1111110000
Q ss_pred eEEEeecCCeeEEEEEEeeecCeEEEEecCCCC---CCCCCCCCCCCCCCCchHHHHHHHHHHHHhhccc----CCCC--
Q 008154 128 CMKICCFGGEQEIAFFHEYREGVDWVFVDHPSY---HRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLV----LPLG-- 198 (576)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~~~~---~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~----~~~~-- 198 (576)
+.............+|+++++++..+. .++..++ -.+.-|...+.+.+.+ ++..
T Consensus 242 ------~~~~~~~~~~~~~~~g~rIvRip~GP~~~~l~Ke~L~-----------~~l~ef~d~~l~~~~~~~~~~~~~~~ 304 (1050)
T TIGR02468 242 ------PRSSENDGDEMGESSGAYIIRIPFGPRDKYIPKEELW-----------PYIPEFVDGALSHIVNMSKVLGEQIG 304 (1050)
T ss_pred ------ccccccccccccCCCCeEEEEeccCCCCCCcCHHHHH-----------HHHHHHHHHHHHHHHhhhhhhhhhhc
Confidence 000000000011236899999984432 2221111 1223333333333221 1100
Q ss_pred CCCCCCccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhc---CC-Chhhhccccccccc
Q 008154 199 GFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNL---GL-PSEWYGALEWVFPT 274 (576)
Q Consensus 199 ~~~~~~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~ 274 (576)
.-....|||||+|.|.++.++..++.. .++|+|+|.|++... ..+.+ |. +..... .
T Consensus 305 ~~~~~~pDvIHaHyw~sG~aa~~L~~~-------lgVP~V~T~HSLgr~------K~~~ll~~g~~~~~~~~---~---- 364 (1050)
T TIGR02468 305 SGHPVWPYVIHGHYADAGDSAALLSGA-------LNVPMVLTGHSLGRD------KLEQLLKQGRMSKEEIN---S---- 364 (1050)
T ss_pred cccCCCCCEEEECcchHHHHHHHHHHh-------hCCCEEEECccchhh------hhhhhcccccccccccc---c----
Confidence 000114999999999999998888875 479999999986311 11100 10 000000 0
Q ss_pred ccccccCCcCccchhHHHHHHhccceeccCccchhhhccccCC---cchhhh-----------hhccCCceeEecCCCCC
Q 008154 275 WARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGG---YGLHEI-----------LSSRKSVLNGITNGIDI 340 (576)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~---~~l~~~-----------~~~~~~~i~vi~nGvd~ 340 (576)
.+.....+..+..+++.||.|+++|+...+++..- ++ ..|... ++....++.|||||||+
T Consensus 365 -----~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~~l-Y~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~ 438 (1050)
T TIGR02468 365 -----TYKIMRRIEAEELSLDASEIVITSTRQEIEEQWGL-YDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEF 438 (1050)
T ss_pred -----ccchHHHHHHHHHHHHhcCEEEEeCHHHHHHHHHH-hccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcH
Confidence 00112445678899999999999999887764221 10 000000 11224589999999999
Q ss_pred CCCCCCCCccccccCCcC-Cc--ccchHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc----CCcE
Q 008154 341 TEWNPSSDEHIASHYSID-DL--SGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA----DDIQ 413 (576)
Q Consensus 341 ~~~~~~~~~~l~~~~~~~-~~--~~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~----~~~~ 413 (576)
..|.|.....--. -.+. .. .........+++.+. + ++.++|+|+||+.+.||++.||+|+..+.. .++.
T Consensus 439 ~~F~P~~~~~~~~-~~~~~~~~~~~~~~~~~~l~r~~~-~--pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~ 514 (1050)
T TIGR02468 439 SHIVPHDGDMDGE-TEGNEEHPAKPDPPIWSEIMRFFT-N--PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT 514 (1050)
T ss_pred HHccCCCccccch-hcccccccccccchhhHHHHhhcc-c--CCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE
Confidence 9998864321000 0000 00 000001112333332 3 577899999999999999999999999864 2454
Q ss_pred EEEEeCCChh----------hHHHHHHHHHH-hcCceEEEccC-ChhHHHHHHhcC----CEEEeCCCCCCCcHHHHHHH
Q 008154 414 FVMLGSGDPQ----------FESWMRDTEAT-YKDKYRGWVGF-NVPISHRITAGC----DILLMPSRFEPCGLNQLYAM 477 (576)
Q Consensus 414 lii~G~g~~~----------~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~ll~~~----Dv~v~ps~~E~~g~s~lEAm 477 (576)
+|+|.++.. .....+.+.+. +.+++. +.++ +.+.+..+|+.| |+||+||.+|+||++++|||
T Consensus 515 -LIiG~gdd~d~l~~~~~~~l~~L~~li~~lgL~g~V~-FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAM 592 (1050)
T TIGR02468 515 -LIMGNRDDIDEMSSGSSSVLTSVLKLIDKYDLYGQVA-YPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAA 592 (1050)
T ss_pred -EEEecCchhhhhhccchHHHHHHHHHHHHhCCCCeEE-ecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHH
Confidence 467876421 11222222221 233444 4554 455666888877 69999999999999999999
Q ss_pred HcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHH--hhhCCHH
Q 008154 478 RYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGM--EKDYTWE 555 (576)
Q Consensus 478 a~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a~--~~~fs~~ 555 (576)
|||+|||+|+.||..|++.+ +.+|+++++.|+++++++|.+++. |++.+.++++++. .++|+|+
T Consensus 593 AcGlPVVASdvGG~~EII~~----------g~nGlLVdP~D~eaLA~AL~~LL~----Dpelr~~m~~~gr~~v~~FSWe 658 (1050)
T TIGR02468 593 AHGLPMVATKNGGPVDIHRV----------LDNGLLVDPHDQQAIADALLKLVA----DKQLWAECRQNGLKNIHLFSWP 658 (1050)
T ss_pred HhCCCEEEeCCCCcHHHhcc----------CCcEEEECCCCHHHHHHHHHHHhh----CHHHHHHHHHHHHHHHHHCCHH
Confidence 99999999999999999998 899999999999999999999885 8899999998873 4589999
Q ss_pred HHHHHHHHHHHHhhhCC
Q 008154 556 NAAIQYEQVFEWASIDP 572 (576)
Q Consensus 556 ~~~~~y~~~y~~~~~~~ 572 (576)
+++++|++.+..+...+
T Consensus 659 ~ia~~yl~~i~~~~~~~ 675 (1050)
T TIGR02468 659 EHCKTYLSRIASCRPRH 675 (1050)
T ss_pred HHHHHHHHHHHHHhccC
Confidence 99999999998876544
No 15
>PRK10307 putative glycosyl transferase; Provisional
Probab=100.00 E-value=1.9e-37 Score=327.05 Aligned_cols=391 Identities=19% Similarity=0.178 Sum_probs=268.2
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec--CCCCCCcccchhccccCceeEEEeecCCeeEEEEE
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR--YFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFF 143 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (576)
|||++++..++|. .||.+.++.+++++|+++||+|+|+|+. |+.+..... +. ....-
T Consensus 1 mkIlii~~~~~P~--~~g~~~~~~~l~~~L~~~G~~V~vit~~~~~~~~~~~~~-~~------------------~~~~~ 59 (412)
T PRK10307 1 MKILVYGINYAPE--LTGIGKYTGEMAEWLAARGHEVRVITAPPYYPQWRVGEG-YS------------------AWRYR 59 (412)
T ss_pred CeEEEEecCCCCC--ccchhhhHHHHHHHHHHCCCeEEEEecCCCCCCCCCCcc-cc------------------cccce
Confidence 7999999998884 7999999999999999999999999964 332211000 00 00001
Q ss_pred EeeecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHH---HHHHHHHHhh-cccCCCCCCCCCCccEEEeCCCccc--h
Q 008154 144 HEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRY---TLLCYAACEA-PLVLPLGGFTYGEKCIFLVNDWHAG--L 217 (576)
Q Consensus 144 ~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~---~~~~~~~~~~-~~~~~~~~~~~~~pDVvH~~~~~~~--~ 217 (576)
.+..+|+++++++....... ....+. ..+....... .+.. . .+|||||+|.+... .
T Consensus 60 ~~~~~~i~v~r~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~Div~~~~p~~~~~~ 121 (412)
T PRK10307 60 RESEGGVTVWRCPLYVPKQP------------SGLKRLLHLGSFALSSFFPLLAQR---R---WRPDRVIGVVPTLFCAP 121 (412)
T ss_pred eeecCCeEEEEccccCCCCc------------cHHHHHHHHHHHHHHHHHHHhhcc---C---CCCCEEEEeCCcHHHHH
Confidence 22347888888863211100 111122 1111111111 1111 1 27999999975432 2
Q ss_pred HHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCC-hhhhcccccccccccccccCCcCccchhHHHHHHh
Q 008154 218 VPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLP-SEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVT 296 (576)
Q Consensus 218 ~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 296 (576)
...++++. .++|+|+++|+.. +.... ..+.. ...+... ...+++.+++.
T Consensus 122 ~~~~~~~~-------~~~~~v~~~~d~~-----~~~~~-~~~~~~~~~~~~~-----------------~~~~~~~~~~~ 171 (412)
T PRK10307 122 GARLLARL-------SGARTWLHIQDYE-----VDAAF-GLGLLKGGKVARL-----------------ATAFERSLLRR 171 (412)
T ss_pred HHHHHHHh-------hCCCEEEEeccCC-----HHHHH-HhCCccCcHHHHH-----------------HHHHHHHHHhh
Confidence 23333332 4689999999742 22211 11211 0111000 01367788899
Q ss_pred ccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCC
Q 008154 297 ADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGL 376 (576)
Q Consensus 297 ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 376 (576)
||.++++|+...+.+.+ ......++.+||||+|.+.|.+.... ....+++.+++
T Consensus 172 ad~ii~~S~~~~~~~~~----------~~~~~~~i~vi~ngvd~~~~~~~~~~----------------~~~~~~~~~~~ 225 (412)
T PRK10307 172 FDNVSTISRSMMNKARE----------KGVAAEKVIFFPNWSEVARFQPVADA----------------DVDALRAQLGL 225 (412)
T ss_pred CCEEEecCHHHHHHHHH----------cCCCcccEEEECCCcCHhhcCCCCcc----------------chHHHHHHcCC
Confidence 99999999998877632 13346689999999998887654321 02346777887
Q ss_pred CCCCCCCEEEEecccccccCHHHHHHHHHhhhc-CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccC-ChhHHHHHH
Q 008154 377 PIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRIT 454 (576)
Q Consensus 377 ~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~-~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll 454 (576)
+ ++.++++|+||+.+.||++.|++|++++.+ ++++|+|+|+|+ ..++..+.+++....++. +.|+ +.+.+..++
T Consensus 226 ~--~~~~~i~~~G~l~~~kg~~~li~a~~~l~~~~~~~l~ivG~g~-~~~~l~~~~~~~~l~~v~-f~G~~~~~~~~~~~ 301 (412)
T PRK10307 226 P--DGKKIVLYSGNIGEKQGLELVIDAARRLRDRPDLIFVICGQGG-GKARLEKMAQCRGLPNVH-FLPLQPYDRLPALL 301 (412)
T ss_pred C--CCCEEEEEcCccccccCHHHHHHHHHHhccCCCeEEEEECCCh-hHHHHHHHHHHcCCCceE-EeCCCCHHHHHHHH
Confidence 7 567899999999999999999999998865 579999999995 233433344432223554 4454 566777899
Q ss_pred hcCCEEEeCCCCCC----CcHHHHHHHHcCCceEEeCcccc--ccccccccccccCCCCCcceeEeCCCCHHHHHHHHHH
Q 008154 455 AGCDILLMPSRFEP----CGLNQLYAMRYGTIPVVHATGGL--RDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRF 528 (576)
Q Consensus 455 ~~~Dv~v~ps~~E~----~g~s~lEAma~G~pvIat~~gg~--~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~ 528 (576)
+.||++++||..|+ ++.+++|||+||+|||+|+.||. .|.+. ++|++++++|+++++++|.+
T Consensus 302 ~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~------------~~G~~~~~~d~~~la~~i~~ 369 (412)
T PRK10307 302 KMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE------------GIGVCVEPESVEALVAAIAA 369 (412)
T ss_pred HhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh------------CCcEEeCCCCHHHHHHHHHH
Confidence 99999999999997 56778999999999999998763 46553 48999999999999999998
Q ss_pred HHHHhhhCHHHHHHHHHHH---HhhhCCHHHHHHHHHHHHHHhhhC
Q 008154 529 AIRTYREHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFEWASID 571 (576)
Q Consensus 529 ~l~~~~~~~~~~~~~~~~a---~~~~fs~~~~~~~y~~~y~~~~~~ 571 (576)
++. |++.+.+|++++ +.++|||++++++|.++|+++++.
T Consensus 370 l~~----~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~ 411 (412)
T PRK10307 370 LAR----QALLRPKLGTVAREYAERTLDKENVLRQFIADIRGLVAE 411 (412)
T ss_pred HHh----CHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcC
Confidence 875 788888888887 356899999999999999998865
No 16
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=100.00 E-value=9.9e-38 Score=338.27 Aligned_cols=433 Identities=17% Similarity=0.160 Sum_probs=268.7
Q ss_pred CceEEEEeecc----CCc---cccCcHHHHHhhHHHHH--------HhCCC----cEEEEEecCCCCCCcccchhccccC
Q 008154 65 SYNIVFVTAEA----APY---SKTGGLGDVCGSLPVAL--------AARGH----RVMVVSPRYFNGTAADENFTLAKDL 125 (576)
Q Consensus 65 ~mkI~~~s~e~----~P~---~~~GG~~~~~~~la~~l--------~~~G~----~V~vi~~~~~~~~~~~~~~~~~~~~ 125 (576)
.|||+++|.+. .|. .-.||..+|+.++|++| +++|| +|.|+|-..+..... .+.+..+
T Consensus 255 ~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~~~--~~~~~~e- 331 (784)
T TIGR02470 255 VFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAEGT--TCNQRLE- 331 (784)
T ss_pred cceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCcccc--ccccccc-
Confidence 48999999986 221 12799999999999985 68999 677998654321100 0000000
Q ss_pred ceeEEEeecCCeeEEEEEEeeecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHH---HHHHHHHHhhcc-cCCCCCCC
Q 008154 126 GCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRY---TLLCYAACEAPL-VLPLGGFT 201 (576)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~---~~~~~~~~~~~~-~~~~~~~~ 201 (576)
.....+++++++++..+... ... ..|..++.-+ ..++..+.+.+. ..+
T Consensus 332 -----------------~~~~~~~~~I~rvp~g~~~~--~~~----~~~i~k~~l~p~l~~f~~~~~~~~~~~~~----- 383 (784)
T TIGR02470 332 -----------------KVYGTEHAWILRVPFRTENG--IIL----RNWISRFEIWPYLETFAEDAEKEILAELQ----- 383 (784)
T ss_pred -----------------cccCCCceEEEEecCCCCcc--ccc----ccccCHHHHHHHHHHHHHHHHHHHHHhcC-----
Confidence 00112578888887332110 000 0012222222 233333333221 222
Q ss_pred CCCccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccC
Q 008154 202 YGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHAL 281 (576)
Q Consensus 202 ~~~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (576)
.+||+||+|.|.+++++..++.+ .++|.++|.|+...... ...+..... ....+
T Consensus 384 -~~pDlIHahy~d~glva~lla~~-------lgVP~v~t~HsL~~~K~------~~~g~~~~~---~e~~~--------- 437 (784)
T TIGR02470 384 -GKPDLIIGNYSDGNLVASLLARK-------LGVTQCTIAHALEKTKY------PDSDIYWQE---FEDKY--------- 437 (784)
T ss_pred -CCCCEEEECCCchHHHHHHHHHh-------cCCCEEEECCcchhhcc------ccccccccc---chhHH---------
Confidence 27999999999999998887765 57999999998732110 001110000 00000
Q ss_pred CcCccchhHHHHHHhccceeccCccchh----hhcc----ccCC-cchhhh---hhccCCceeEecCCCCCCCCCCCCCc
Q 008154 282 DTGEAVNVLKGAIVTADRLLTVSKGYSW----EITT----VEGG-YGLHEI---LSSRKSVLNGITNGIDITEWNPSSDE 349 (576)
Q Consensus 282 ~~~~~~~~~~~a~~~ad~v~~vS~~~~~----~~~~----~~~~-~~l~~~---~~~~~~~i~vi~nGvd~~~~~~~~~~ 349 (576)
....++.-+..+++.||.|++.|..... .+.. ..+. .+|.+. +.....|+.+||+|+|...|.|.+..
T Consensus 438 ~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~ 517 (784)
T TIGR02470 438 HFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDK 517 (784)
T ss_pred HhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCch
Confidence 0011223366888999999999963211 1100 0000 001111 12245689999999998888765432
Q ss_pred cccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCCh----h
Q 008154 350 HIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDP----Q 423 (576)
Q Consensus 350 ~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~----~ 423 (576)
.-...-..+....-.-++...++.+|+..++++++|+++||+.+.||++.|++|+.++.. ++++|+|+|++.. .
T Consensus 518 ~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s~ 597 (784)
T TIGR02470 518 EKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKESK 597 (784)
T ss_pred hhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCCCeEEEEEeCCccccccc
Confidence 100000000000000012334566777545788999999999999999999999987643 4789999998642 0
Q ss_pred h-H-----HHHHHHHHH--hcCceEEEccC--ChhHHHHHH---h-cCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCcc
Q 008154 424 F-E-----SWMRDTEAT--YKDKYRGWVGF--NVPISHRIT---A-GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG 489 (576)
Q Consensus 424 ~-~-----~~~~~~~~~--~~~~~~~~~~~--~~~~~~~ll---~-~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~g 489 (576)
. + +.+..+.+. +.+++. +.++ +......++ + ++|++|+||.+|+||++++||||||+|||+|+.|
T Consensus 598 d~ee~~~i~~L~~la~~~gL~g~V~-flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~G 676 (784)
T TIGR02470 598 DREEQAEIEKMHNLIDQYQLHGQIR-WIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFG 676 (784)
T ss_pred chhHHHHHHHHHHHHHHhCCCCeEE-EccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCC
Confidence 1 1 111122222 234554 4443 222222333 3 5689999999999999999999999999999999
Q ss_pred ccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHH---hhhCCHHHHHHHHHHHH
Q 008154 490 GLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGM---EKDYTWENAAIQYEQVF 565 (576)
Q Consensus 490 g~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a~---~~~fs~~~~~~~y~~~y 565 (576)
|..|++.+ +.+|+++++.|+++++++|.+++.....|++.|.+++++++ .++|||+++++++.++.
T Consensus 677 G~~EiV~d----------g~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 677 GPLEIIQD----------GVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred CHHHHhcC----------CCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 99999998 89999999999999999999998766679999999999884 47899999999998765
No 17
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=100.00 E-value=3.6e-37 Score=322.52 Aligned_cols=372 Identities=22% Similarity=0.220 Sum_probs=258.2
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 145 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (576)
|||++++..++|. ..||.++++.+++++|++. |+|.|++...+. .
T Consensus 1 mkI~~i~~~~~p~-~~GG~~~~v~~l~~~l~~~-~~v~v~~~~~~~---------------------------------~ 45 (388)
T TIGR02149 1 MKVTVLTREYPPN-VYGGAGVHVEELTRELARL-MDVDVRCFGDQR---------------------------------F 45 (388)
T ss_pred CeeEEEecccCcc-ccccHhHHHHHHHHHHHHh-cCeeEEcCCCch---------------------------------h
Confidence 8999999998884 4699999999999999987 777777643211 0
Q ss_pred eecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhh
Q 008154 146 YREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASK 225 (576)
Q Consensus 146 ~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~ 225 (576)
..++++++.+........ + . ..+..+......... ..+|||||+|.+.+++.+.+...
T Consensus 46 ~~~~~~~~~~~~~~~~~~---~--------~--~~~~~~~~~~~~~~~--------~~~~divh~~~~~~~~~~~~~~~- 103 (388)
T TIGR02149 46 DSEGLTVKGYRPWSELKE---A--------N--KALGTFSVDLAMAND--------PVDADVVHSHTWYTFLAGHLAKK- 103 (388)
T ss_pred cCCCeEEEEecChhhccc---h--------h--hhhhhhhHHHHHhhC--------CCCCCeEeecchhhhhHHHHHHH-
Confidence 113555554432110000 0 0 000111111111111 11689999999877665544332
Q ss_pred ccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCc
Q 008154 226 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 305 (576)
Q Consensus 226 ~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~ 305 (576)
. .++|+|+|.|+......+... ..+..... ...+++.+++.+|.++++|+
T Consensus 104 ~------~~~p~v~~~h~~~~~~~~~~~---~~~~~~~~---------------------~~~~~~~~~~~ad~vi~~S~ 153 (388)
T TIGR02149 104 L------YDKPLVVTAHSLEPLRPWKEE---QLGGGYKL---------------------SSWAEKTAIEAADRVIAVSG 153 (388)
T ss_pred h------cCCCEEEEeeccccccccccc---ccccchhH---------------------HHHHHHHHHhhCCEEEEccH
Confidence 2 579999999986321111000 00000000 01256778899999999999
Q ss_pred cchhhhccccCCcchhhhh-hccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCE
Q 008154 306 GYSWEITTVEGGYGLHEIL-SSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPL 384 (576)
Q Consensus 306 ~~~~~~~~~~~~~~l~~~~-~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 384 (576)
.+.+.+.. .+ .....++.+||||+|...+.+.. ....+..++++ ++.++
T Consensus 154 ~~~~~~~~---------~~~~~~~~~i~vi~ng~~~~~~~~~~-------------------~~~~~~~~~~~--~~~~~ 203 (388)
T TIGR02149 154 GMREDILK---------YYPDLDPEKVHVIYNGIDTKEYKPDD-------------------GNVVLDRYGID--RSRPY 203 (388)
T ss_pred HHHHHHHH---------HcCCCCcceEEEecCCCChhhcCCCc-------------------hHHHHHHhCCC--CCceE
Confidence 88876532 22 23456899999999988776543 34566777876 56789
Q ss_pred EEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChh--hHHHHHHHHHHhc---CceEEEcc-CChhHHHHHHhcCC
Q 008154 385 IGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQ--FESWMRDTEATYK---DKYRGWVG-FNVPISHRITAGCD 458 (576)
Q Consensus 385 i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~--~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~ll~~~D 458 (576)
++|+||+.+.||++.+++|++++. ++++++++|+++.. ..+..+.....+. .++.++.+ .+.+.+..+++.||
T Consensus 204 i~~~Grl~~~Kg~~~li~a~~~l~-~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~aD 282 (388)
T TIGR02149 204 ILFVGRITRQKGVPHLLDAVHYIP-KDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAE 282 (388)
T ss_pred EEEEcccccccCHHHHHHHHHHHh-hcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHhCC
Confidence 999999999999999999999984 47889998877421 2222222222222 23555554 35666788999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCH------HHHHHHHHHHHHH
Q 008154 459 ILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSE------ESMLTALRFAIRT 532 (576)
Q Consensus 459 v~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~------~~la~~i~~~l~~ 532 (576)
++|+||.+|++|++++|||++|+|||+++.|+..|++.+ +.+|++++++|+ ++++++|.+++.
T Consensus 283 v~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~----------~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~- 351 (388)
T TIGR02149 283 VFVCPSIYEPLGIVNLEAMACGTPVVASATGGIPEVVVD----------GETGFLVPPDNSDADGFQAELAKAINILLA- 351 (388)
T ss_pred EEEeCCccCCCChHHHHHHHcCCCEEEeCCCCHHHHhhC----------CCceEEcCCCCCcccchHHHHHHHHHHHHh-
Confidence 999999999999999999999999999999999999988 889999998887 777777777664
Q ss_pred hhhCHHHHHHHHHHHH---hhhCCHHHHHHHHHHHHHHhh
Q 008154 533 YREHKSSWEGLMRRGM---EKDYTWENAAIQYEQVFEWAS 569 (576)
Q Consensus 533 ~~~~~~~~~~~~~~a~---~~~fs~~~~~~~y~~~y~~~~ 569 (576)
|++.+.++++++. .++|||+.++++|.++|++++
T Consensus 352 ---~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~~ 388 (388)
T TIGR02149 352 ---DPELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKVL 388 (388)
T ss_pred ---CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhC
Confidence 8888888888873 568999999999999999764
No 18
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=100.00 E-value=2.4e-37 Score=330.69 Aligned_cols=378 Identities=16% Similarity=0.184 Sum_probs=254.0
Q ss_pred CCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEE
Q 008154 63 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAF 142 (576)
Q Consensus 63 ~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (576)
.++|||++++...++ ...||.+.++.+++++|.++||+|+++++..... .
T Consensus 56 ~~~mrI~~~~~~~~~-~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~~~~----~------------------------- 105 (465)
T PLN02871 56 SRPRRIALFVEPSPF-SYVSGYKNRFQNFIRYLREMGDEVLVVTTDEGVP----Q------------------------- 105 (465)
T ss_pred CCCceEEEEECCcCC-cccccHHHHHHHHHHHHHHCCCeEEEEecCCCCC----c-------------------------
Confidence 678999999854333 4689999999999999999999999999753210 0
Q ss_pred EEeeecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHH
Q 008154 143 FHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLL 222 (576)
Q Consensus 143 ~~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l 222 (576)
...++.++.+...+.. .+... ...+. +...+.+.++.. +|||||+|.........+.
T Consensus 106 ---~~~g~~v~~~~~~~~~----~~~~~-------~~~~~-~~~~l~~~i~~~--------kpDiIh~~~~~~~~~~~~~ 162 (465)
T PLN02871 106 ---EFHGAKVIGSWSFPCP----FYQKV-------PLSLA-LSPRIISEVARF--------KPDLIHASSPGIMVFGALF 162 (465)
T ss_pred ---cccCceeeccCCcCCc----cCCCc-------eeecc-CCHHHHHHHHhC--------CCCEEEECCCchhHHHHHH
Confidence 0012222222110000 01000 00000 001122222222 7999999975433222222
Q ss_pred HhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceec
Q 008154 223 ASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLT 302 (576)
Q Consensus 223 ~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~ 302 (576)
..+. .++|+|+|.|+.... . ...... ..+.. ..+.+++...+.+|.+++
T Consensus 163 ~ak~------~~ip~V~~~h~~~~~-----~-~~~~~~--~~~~~-----------------~~~~~~r~~~~~ad~ii~ 211 (465)
T PLN02871 163 YAKL------LCVPLVMSYHTHVPV-----Y-IPRYTF--SWLVK-----------------PMWDIIRFLHRAADLTLV 211 (465)
T ss_pred HHHH------hCCCEEEEEecCchh-----h-hhcccc--hhhHH-----------------HHHHHHHHHHhhCCEEEE
Confidence 2222 478999999975211 0 000000 00000 001244666789999999
Q ss_pred cCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCC
Q 008154 303 VSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDC 382 (576)
Q Consensus 303 vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 382 (576)
+|+...+.+.. ....+..++.+||||+|.+.|.+.... ...++.+... .++.
T Consensus 212 ~S~~~~~~l~~---------~~~~~~~kv~vi~nGvd~~~f~p~~~~------------------~~~~~~~~~~-~~~~ 263 (465)
T PLN02871 212 TSPALGKELEA---------AGVTAANRIRVWNKGVDSESFHPRFRS------------------EEMRARLSGG-EPEK 263 (465)
T ss_pred CCHHHHHHHHH---------cCCCCcCeEEEeCCccCccccCCcccc------------------HHHHHHhcCC-CCCC
Confidence 99988877632 112235689999999999888764321 2233333211 1367
Q ss_pred CEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccC-ChhHHHHHHhcCCEEE
Q 008154 383 PLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRITAGCDILL 461 (576)
Q Consensus 383 ~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~Dv~v 461 (576)
++|+|+||+.+.||++.++++++++ ++++|+|+|+|+ ..++ ++...+.. ++ .+.|+ +.+.+..+|+.+|++|
T Consensus 264 ~~i~~vGrl~~~K~~~~li~a~~~~--~~~~l~ivG~G~-~~~~-l~~~~~~~--~V-~f~G~v~~~ev~~~~~~aDv~V 336 (465)
T PLN02871 264 PLIVYVGRLGAEKNLDFLKRVMERL--PGARLAFVGDGP-YREE-LEKMFAGT--PT-VFTGMLQGDELSQAYASGDVFV 336 (465)
T ss_pred eEEEEeCCCchhhhHHHHHHHHHhC--CCcEEEEEeCCh-HHHH-HHHHhccC--Ce-EEeccCCHHHHHHHHHHCCEEE
Confidence 8999999999999999999999887 589999999985 2233 33332222 33 34454 4456778999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHH
Q 008154 462 MPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWE 541 (576)
Q Consensus 462 ~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~ 541 (576)
+||.+|++|++++||||||+|||+++.||..|++.+ .+.+.+|++++++|+++++++|.+++. |++.+.
T Consensus 337 ~pS~~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~-------~~~~~~G~lv~~~d~~~la~~i~~ll~----~~~~~~ 405 (465)
T PLN02871 337 MPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPP-------DQEGKTGFLYTPGDVDDCVEKLETLLA----DPELRE 405 (465)
T ss_pred ECCcccccCcHHHHHHHcCCCEEEcCCCCcHhhhhc-------CCCCCceEEeCCCCHHHHHHHHHHHHh----CHHHHH
Confidence 999999999999999999999999999999999864 122689999999999999999999885 788888
Q ss_pred HHHHHH--HhhhCCHHHHHHHHHH-HHHHhhh
Q 008154 542 GLMRRG--MEKDYTWENAAIQYEQ-VFEWASI 570 (576)
Q Consensus 542 ~~~~~a--~~~~fs~~~~~~~y~~-~y~~~~~ 570 (576)
++++++ ..++|+|+.+++++.+ .|+.++.
T Consensus 406 ~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~ 437 (465)
T PLN02871 406 RMGAAAREEVEKWDWRAATRKLRNEQYSAAIW 437 (465)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 888887 3468999999999998 7988764
No 19
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=100.00 E-value=4e-37 Score=323.01 Aligned_cols=365 Identities=20% Similarity=0.209 Sum_probs=249.0
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++..+.|. .||.++++..++++|+++||+|+|+++.++..... +..
T Consensus 1 kI~~v~~~~~p~--~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~----------------------------~~~ 50 (398)
T cd03796 1 RICMVSDFFYPN--LGGVETHIYQLSQCLIKRGHKVVVITHAYGNRVGI----------------------------RYL 50 (398)
T ss_pred CeeEEeeccccc--cccHHHHHHHHHHHHHHcCCeeEEEeccCCcCCCc----------------------------ccc
Confidence 699999998984 79999999999999999999999999764321000 011
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHH-HHHHhh
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVP-VLLASK 225 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~-~~l~~~ 225 (576)
..+++++.++.....+...+. .+......+.+.+... +|||||+|.+...+.. ..+..+
T Consensus 51 ~~~i~v~~~p~~~~~~~~~~~------------~~~~~~~~l~~~~~~~--------~~DiIh~~~~~~~~~~~~~~~~~ 110 (398)
T cd03796 51 TNGLKVYYLPFVVFYNQSTLP------------TFFGTFPLLRNILIRE--------RITIVHGHQAFSALAHEALLHAR 110 (398)
T ss_pred cCceeEEEecceeccCCcccc------------chhhhHHHHHHHHHhc--------CCCEEEECCCCchHHHHHHHHhh
Confidence 246677776532221110010 0000111122222212 7999999987655432 222222
Q ss_pred ccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCc
Q 008154 226 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 305 (576)
Q Consensus 226 ~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~ 305 (576)
. .++|+|+|.|+.... .. ...... ..+.+..++.+|.++++|+
T Consensus 111 ~------~~~~~v~t~h~~~~~---~~-------~~~~~~---------------------~~~~~~~~~~~d~ii~~s~ 153 (398)
T cd03796 111 T------MGLKTVFTDHSLFGF---AD-------ASSIHT---------------------NKLLRFSLADVDHVICVSH 153 (398)
T ss_pred h------cCCcEEEEecccccc---cc-------hhhHHh---------------------hHHHHHhhccCCEEEEecH
Confidence 2 578999999975210 00 000000 0134556788999999999
Q ss_pred cchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEE
Q 008154 306 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 385 (576)
Q Consensus 306 ~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i 385 (576)
...+.+.. ....+..++.+||||+|.+.|.+.... .+ ++.+++
T Consensus 154 ~~~~~~~~---------~~~~~~~k~~vi~ngvd~~~f~~~~~~--------------------------~~--~~~~~i 196 (398)
T cd03796 154 TSKENTVL---------RASLDPERVSVIPNAVDSSDFTPDPSK--------------------------RD--NDKITI 196 (398)
T ss_pred hHhhHHHH---------HhCCChhhEEEEcCccCHHHcCCCccc--------------------------CC--CCceEE
Confidence 87654311 112345789999999998777654311 11 467899
Q ss_pred EEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHH-hcCceEEEccCChhHHHHHHhcCCEEEe
Q 008154 386 GFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEAT-YKDKYRGWVGFNVPISHRITAGCDILLM 462 (576)
Q Consensus 386 ~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ 462 (576)
+|+||+.+.||++.+++|+..+.+ ++++++|+|+|+ ..+...+.+++. +..++.+....+.+.+..+++.+|++++
T Consensus 197 ~~~grl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~-~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ad~~v~ 275 (398)
T cd03796 197 VVISRLVYRKGIDLLVGIIPEICKKHPNVRFIIGGDGP-KRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQGHIFLN 275 (398)
T ss_pred EEEeccchhcCHHHHHHHHHHHHhhCCCEEEEEEeCCc-hHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhCCEEEe
Confidence 999999999999999999998865 689999999985 334444444433 2334544333355667789999999999
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHH
Q 008154 463 PSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEG 542 (576)
Q Consensus 463 ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~ 542 (576)
||..|++|++++||||||+|||+++.||..|++.+ + .+++. +.|+++++++|.+++.+ ......
T Consensus 276 pS~~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~----------~-~~~~~-~~~~~~l~~~l~~~l~~----~~~~~~ 339 (398)
T cd03796 276 TSLTEAFCIAIVEAASCGLLVVSTRVGGIPEVLPP----------D-MILLA-EPDVESIVRKLEEAISI----LRTGKH 339 (398)
T ss_pred CChhhccCHHHHHHHHcCCCEEECCCCCchhheeC----------C-ceeec-CCCHHHHHHHHHHHHhC----hhhhhh
Confidence 99999999999999999999999999999999976 3 34444 44899999999999873 222222
Q ss_pred HHH---HHHhhhCCHHHHHHHHHHHHHHhhhCC
Q 008154 543 LMR---RGMEKDYTWENAAIQYEQVFEWASIDP 572 (576)
Q Consensus 543 ~~~---~a~~~~fs~~~~~~~y~~~y~~~~~~~ 572 (576)
+++ +.+.++|||++++++|.++|++++..+
T Consensus 340 ~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~~~ 372 (398)
T cd03796 340 DPWSFHNRVKKMYSWEDVAKRTEKVYDRILQTP 372 (398)
T ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHHHHhcCC
Confidence 333 336789999999999999999987643
No 20
>PLN00142 sucrose synthase
Probab=100.00 E-value=2.8e-36 Score=326.85 Aligned_cols=431 Identities=16% Similarity=0.150 Sum_probs=268.2
Q ss_pred ceEEEEeeccC-------CccccCcHHHHHhhHH--------HHHHhCCCcEE----EEEecCCCCCCcccchhccccCc
Q 008154 66 YNIVFVTAEAA-------PYSKTGGLGDVCGSLP--------VALAARGHRVM----VVSPRYFNGTAADENFTLAKDLG 126 (576)
Q Consensus 66 mkI~~~s~e~~-------P~~~~GG~~~~~~~la--------~~l~~~G~~V~----vi~~~~~~~~~~~~~~~~~~~~~ 126 (576)
|+|+++|...+ ....+||.-+|+.++| ++|+++||+|+ |+|-..+..... .+.+..
T Consensus 280 ~~i~~iS~Hg~~~~~~~lG~~DtGGQ~vYVl~~aral~~el~~~l~~~G~~v~~~v~i~TR~i~~~~~~--~~~~~~--- 354 (815)
T PLN00142 280 FNVVIFSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKQQGLDIKPQILIVTRLIPDAKGT--TCNQRL--- 354 (815)
T ss_pred HhhheecccccccccccCCCCCCCCceehHHHHHHHHHHHHHHHHHhcCCCccceeEEEEeccCCccCC--cccCcc---
Confidence 58999998732 1124899999998755 67778999885 888544322100 000000
Q ss_pred eeEEEeecCCeeEEEEEEeeecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHH---HHHHHHHHhhc-ccCCCCCCCC
Q 008154 127 CCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRY---TLLCYAACEAP-LVLPLGGFTY 202 (576)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~---~~~~~~~~~~~-~~~~~~~~~~ 202 (576)
+ .....+++++.+++..+-. . |-. .|..++.-+ ..++..+.+.+ +..+
T Consensus 355 ---e------------~v~~~~~~~I~rvP~g~~~---~-~l~---~~i~ke~l~p~L~~f~~~~~~~~~~~~~------ 406 (815)
T PLN00142 355 ---E------------KVSGTEHSHILRVPFRTEK---G-ILR---KWISRFDVWPYLETFAEDAASEILAELQ------ 406 (815)
T ss_pred ---e------------eccCCCceEEEecCCCCCc---c-ccc---cccCHHHHHHHHHHHHHHHHHHHHHhcC------
Confidence 0 0001136777777633210 0 000 011222222 22333333222 1121
Q ss_pred CCccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCC
Q 008154 203 GEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALD 282 (576)
Q Consensus 203 ~~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (576)
.+||+||+|.|.+++++..++.+ .++|.|+|.|+...... ...+...... .. .+.
T Consensus 407 ~~PDlIHaHYwdsg~vA~~La~~-------lgVP~v~T~HsL~k~K~------~~~~~~~~~~---e~---------~y~ 461 (815)
T PLN00142 407 GKPDLIIGNYSDGNLVASLLAHK-------LGVTQCTIAHALEKTKY------PDSDIYWKKF---DD---------KYH 461 (815)
T ss_pred CCCCEEEECCccHHHHHHHHHHH-------hCCCEEEEcccchhhhc------cccCCccccc---ch---------hhh
Confidence 26999999999999999998876 47999999998732111 0001100000 00 000
Q ss_pred cCccchhHHHHHHhccceeccCccchhhhccc--cC----C---cchhhhh---hccCCceeEecCCCCCCCCCCCCCcc
Q 008154 283 TGEAVNVLKGAIVTADRLLTVSKGYSWEITTV--EG----G---YGLHEIL---SSRKSVLNGITNGIDITEWNPSSDEH 350 (576)
Q Consensus 283 ~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~--~~----~---~~l~~~~---~~~~~~i~vi~nGvd~~~~~~~~~~~ 350 (576)
+..++..+..+++.||.|++.|......+... .+ + .+|+..+ .....++.+||+|+|...|.|.....
T Consensus 462 ~~~r~~aE~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~ 541 (815)
T PLN00142 462 FSCQFTADLIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQ 541 (815)
T ss_pred hhhchHHHHHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHH
Confidence 12234567889999999999886544321100 00 0 0111111 12245889999999998887654221
Q ss_pred ccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCC-Chh---h
Q 008154 351 IASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSG-DPQ---F 424 (576)
Q Consensus 351 l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g-~~~---~ 424 (576)
-.....-.......-+....++.+|+..+++.++|+++||+.+.||++.|++|+.++.+ ++++|+|+|++ ++. .
T Consensus 542 ~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d 621 (815)
T PLN00142 542 KRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKD 621 (815)
T ss_pred hhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCcccccccc
Confidence 00000000000111112233456676444677899999999999999999999998754 47999999987 211 1
Q ss_pred HH------HHHHHHHH--hcCceEEEccC-----ChhHHHHHHh-cCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccc
Q 008154 425 ES------WMRDTEAT--YKDKYRGWVGF-----NVPISHRITA-GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG 490 (576)
Q Consensus 425 ~~------~~~~~~~~--~~~~~~~~~~~-----~~~~~~~ll~-~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg 490 (576)
.+ .+..+.+. +.+++. +.+. +.+....+++ ++|++|+||.+|+||++++||||||+|||+|+.||
T Consensus 622 ~ee~~el~~L~~La~~lgL~~~V~-flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG 700 (815)
T PLN00142 622 REEIAEIKKMHSLIEKYNLKGQFR-WIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGG 700 (815)
T ss_pred HHHHHHHHHHHHHHHHcCCCCcEE-EcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCC
Confidence 11 11122222 234554 3332 1123334555 57999999999999999999999999999999999
Q ss_pred cccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHH---hhhCCHHHHHHHHHHHH
Q 008154 491 LRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGM---EKDYTWENAAIQYEQVF 565 (576)
Q Consensus 491 ~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a~---~~~fs~~~~~~~y~~~y 565 (576)
..|++.+ |.+|++++++|+++++++|.+++..+..|++.|.++++++. .++|||+.++++++++-
T Consensus 701 ~~EIV~d----------G~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 701 PAEIIVD----------GVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHHHhcC----------CCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 9999998 99999999999999999999988766679999999999883 46899999999998764
No 21
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=8.3e-36 Score=310.08 Aligned_cols=366 Identities=21% Similarity=0.250 Sum_probs=255.4
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 145 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (576)
|||++++ +| ..||.++++.+++++|++.||+|++++...+... . .
T Consensus 1 mki~~~~---~p--~~gG~~~~~~~la~~L~~~G~~v~v~~~~~~~~~------~------------------------~ 45 (371)
T cd04962 1 MKIGIVC---YP--TYGGSGVVATELGKALARRGHEVHFITSSRPFRL------D------------------------E 45 (371)
T ss_pred CceeEEE---Ee--CCCCccchHHHHHHHHHhcCCceEEEecCCCcch------h------------------------h
Confidence 7899997 35 2699999999999999999999999986432110 0 0
Q ss_pred eecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhh
Q 008154 146 YREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASK 225 (576)
Q Consensus 146 ~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~ 225 (576)
...++.++.++.+.+.. .. ..... ......+.+.++.. +|||||+|.+.......++..+
T Consensus 46 ~~~~~~~~~~~~~~~~~----~~-------~~~~~-~~~~~~l~~~i~~~--------~~divh~~~~~~~~~~~~~~~~ 105 (371)
T cd04962 46 YSPNIFFHEVEVPQYPL----FQ-------YPPYD-LALASKIAEVAKRY--------KLDLLHVHYAVPHAVAAYLARE 105 (371)
T ss_pred hccCeEEEEecccccch----hh-------cchhH-HHHHHHHHHHHhcC--------CccEEeecccCCccHHHHHHHH
Confidence 01222322222111100 00 00000 11122333333222 7999999976554444444432
Q ss_pred ccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCc
Q 008154 226 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 305 (576)
Q Consensus 226 ~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~ 305 (576)
... ..++|+|+|+|+..... .+.. .....+.+.+++.+|.++++|+
T Consensus 106 ~~~---~~~~~~i~~~h~~~~~~---------~~~~----------------------~~~~~~~~~~~~~~d~ii~~s~ 151 (371)
T cd04962 106 ILG---KKDLPVVTTLHGTDITL---------VGQD----------------------PSFQPATRFSIEKSDGVTAVSE 151 (371)
T ss_pred hcC---cCCCcEEEEEcCCcccc---------cccc----------------------ccchHHHHHHHhhCCEEEEcCH
Confidence 210 03689999999652110 0000 0011356677899999999999
Q ss_pred cchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEE
Q 008154 306 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 385 (576)
Q Consensus 306 ~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i 385 (576)
...+.+.+ .+ ....++.+||||+|...+.+.. ....++..+++ ++..++
T Consensus 152 ~~~~~~~~---------~~-~~~~~i~vi~n~~~~~~~~~~~-------------------~~~~~~~~~~~--~~~~~i 200 (371)
T cd04962 152 SLRQETYE---------LF-DITKEIEVIPNFVDEDRFRPKP-------------------DEALKRRLGAP--EGEKVL 200 (371)
T ss_pred HHHHHHHH---------hc-CCcCCEEEecCCcCHhhcCCCc-------------------hHHHHHhcCCC--CCCeEE
Confidence 88776532 12 2356799999999977665443 22344566665 567889
Q ss_pred EEecccccccCHHHHHHHHHhhhc-CCcEEEEEeCCChhhHHHHHHHHHH-hcCceEEEccCChhHHHHHHhcCCEEEeC
Q 008154 386 GFIGRLDYQKGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEAT-YKDKYRGWVGFNVPISHRITAGCDILLMP 463 (576)
Q Consensus 386 ~~~Gr~~~~Kg~~~ll~a~~~L~~-~~~~lii~G~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~Dv~v~p 463 (576)
+++||+.+.||++.+++|+.++.+ .+++++++|.|+. .+...+.+.+. ...++. +.++..+ +..+++.||++|+|
T Consensus 201 l~~g~l~~~K~~~~li~a~~~l~~~~~~~l~i~G~g~~-~~~~~~~~~~~~~~~~v~-~~g~~~~-~~~~~~~~d~~v~p 277 (371)
T cd04962 201 IHISNFRPVKRIDDVIRIFAKVRKEVPARLLLVGDGPE-RSPAERLARELGLQDDVL-FLGKQDH-VEELLSIADLFLLP 277 (371)
T ss_pred EEecccccccCHHHHHHHHHHHHhcCCceEEEEcCCcC-HHHHHHHHHHcCCCceEE-EecCccc-HHHHHHhcCEEEeC
Confidence 999999999999999999999876 4799999999953 34444433332 233444 4555444 56899999999999
Q ss_pred CCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHH
Q 008154 464 SRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGL 543 (576)
Q Consensus 464 s~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~ 543 (576)
|.+|++|++++|||++|+|||+|+.|+..|++.+ +.+|++++++|++++++++.+++. +++.+.++
T Consensus 278 s~~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~----------~~~G~~~~~~~~~~l~~~i~~l~~----~~~~~~~~ 343 (371)
T cd04962 278 SEKESFGLAALEAMACGVPVVASNAGGIPEVVKH----------GETGFLVDVGDVEAMAEYALSLLE----DDELWQEF 343 (371)
T ss_pred CCcCCCccHHHHHHHcCCCEEEeCCCCchhhhcC----------CCceEEcCCCCHHHHHHHHHHHHh----CHHHHHHH
Confidence 9999999999999999999999999999999998 899999999999999999998875 78888888
Q ss_pred HHHH---HhhhCCHHHHHHHHHHHHHHh
Q 008154 544 MRRG---MEKDYTWENAAIQYEQVFEWA 568 (576)
Q Consensus 544 ~~~a---~~~~fs~~~~~~~y~~~y~~~ 568 (576)
++++ +.++|||+.++++|.++|+++
T Consensus 344 ~~~~~~~~~~~fs~~~~~~~~~~~y~~~ 371 (371)
T cd04962 344 SRAARNRAAERFDSERIVPQYEALYRRL 371 (371)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 8877 357899999999999999864
No 22
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=100.00 E-value=8.1e-35 Score=302.85 Aligned_cols=360 Identities=13% Similarity=0.200 Sum_probs=248.0
Q ss_pred eEEEEeeccCCc--cccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEE
Q 008154 67 NIVFVTAEAAPY--SKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFH 144 (576)
Q Consensus 67 kI~~~s~e~~P~--~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (576)
||++++.+-+|. ...||+++++..+++.|+. +|+++|...+. .... +
T Consensus 4 ~~~~~~~~~~~~p~~~~g~ve~~~~~~~~~l~~---~~~~~~~~~~~-~~~~---------------------------~ 52 (380)
T PRK15484 4 KIIFTVTPIFSIPPRGAAAVETWIYQVAKRTSI---PNRIACIKNPG-YPEY---------------------------T 52 (380)
T ss_pred eEEEEeccCCCCCCccccHHHHHHHHhhhhccC---CeeEEEecCCC-CCch---------------------------h
Confidence 699998884332 5689999999999999953 99999977553 1110 1
Q ss_pred eeecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHh
Q 008154 145 EYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLAS 224 (576)
Q Consensus 145 ~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~ 224 (576)
...+|+.++.++-+. +|+...+-|... +...+...+...+... ...++||||+|+... +. ..+..
T Consensus 53 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-----~~~~~~vi~v~~~~~-~~-~~~~~ 117 (380)
T PRK15484 53 KVNDNCDIHYIGFSR------IYKRLFQKWTRL--DPLPYSQRILNIAHKF-----TITKDSVIVIHNSMK-LY-RQIRE 117 (380)
T ss_pred hccCCCceEEEEecc------ccchhhhhhhcc--CchhHHHHHHHHHHhc-----CCCCCcEEEEeCcHH-hH-HHHHh
Confidence 122566666664221 111100000000 0011122222222111 112689999998432 22 22233
Q ss_pred hccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccC
Q 008154 225 KYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 304 (576)
Q Consensus 225 ~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS 304 (576)
+. +++++|++.|+.. . ...+..++.++++|
T Consensus 118 ~~------~~~~~v~~~h~~~-----~---------------------------------------~~~~~~~~~ii~~S 147 (380)
T PRK15484 118 RA------PQAKLVMHMHNAF-----E---------------------------------------PELLDKNAKIIVPS 147 (380)
T ss_pred hC------CCCCEEEEEeccc-----C---------------------------------------hhHhccCCEEEEcC
Confidence 22 6789999999641 0 11124578999999
Q ss_pred ccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCE
Q 008154 305 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPL 384 (576)
Q Consensus 305 ~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 384 (576)
+..++.+.. ..+..++.+||||+|.+.|.+.. ....++.++++ ++..+
T Consensus 148 ~~~~~~~~~-----------~~~~~~i~vIpngvd~~~~~~~~-------------------~~~~~~~~~~~--~~~~~ 195 (380)
T PRK15484 148 QFLKKFYEE-----------RLPNADISIVPNGFCLETYQSNP-------------------QPNLRQQLNIS--PDETV 195 (380)
T ss_pred HHHHHHHHh-----------hCCCCCEEEecCCCCHHHcCCcc-------------------hHHHHHHhCCC--CCCeE
Confidence 988876531 12355789999999987776543 23456677776 46688
Q ss_pred EEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChh-------hHHHHHHHHHHhcCceEEEccCChhHHHHHHh
Q 008154 385 IGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQ-------FESWMRDTEATYKDKYRGWVGFNVPISHRITA 455 (576)
Q Consensus 385 i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 455 (576)
|+|+||+.+.||++.+++|+..+.+ ++++|+|+|+++.. +.+..+.+...+..++.+....+.+.+..+|+
T Consensus 196 il~~Grl~~~Kg~~~Li~A~~~l~~~~p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~~v~~~G~~~~~~l~~~~~ 275 (380)
T PRK15484 196 LLYAGRISPDKGILLLMQAFEKLATAHSNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIGDRCIMLGGQPPEKMHNYYP 275 (380)
T ss_pred EEEeccCccccCHHHHHHHHHHHHHhCCCeEEEEEeCCccccccchhHHHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHH
Confidence 9999999999999999999999865 68999999987421 12223333334455555443345567778999
Q ss_pred cCCEEEeCCCC-CCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCccee-EeCCCCHHHHHHHHHHHHHHh
Q 008154 456 GCDILLMPSRF-EPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGW-SFLPLSEESMLTALRFAIRTY 533 (576)
Q Consensus 456 ~~Dv~v~ps~~-E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~-~~~~~d~~~la~~i~~~l~~~ 533 (576)
.||++|+||.+ |+||++++||||||+|||+|+.||++|++.+ +.+|+ ++++.|+++++++|.+++.
T Consensus 276 ~aDv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~----------~~~G~~l~~~~d~~~la~~I~~ll~-- 343 (380)
T PRK15484 276 LADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGITEFVLE----------GITGYHLAEPMTSDSIISDINRTLA-- 343 (380)
T ss_pred hCCEEEeCCCCccccccHHHHHHHcCCCEEEeCCCCcHhhccc----------CCceEEEeCCCCHHHHHHHHHHHHc--
Confidence 99999999985 9999999999999999999999999999998 89999 5578899999999999886
Q ss_pred hhCHHHHHHHHHHH---HhhhCCHHHHHHHHHHHHHHhh
Q 008154 534 REHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFEWAS 569 (576)
Q Consensus 534 ~~~~~~~~~~~~~a---~~~~fs~~~~~~~y~~~y~~~~ 569 (576)
|++. .++++++ +.++|||++++++|.++|+...
T Consensus 344 --d~~~-~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~~~ 379 (380)
T PRK15484 344 --DPEL-TQIAEQAKDFVFSKYSWEGVTQRFEEQIHNWF 379 (380)
T ss_pred --CHHH-HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhc
Confidence 6654 5677776 4579999999999999998643
No 23
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=100.00 E-value=2.8e-35 Score=308.24 Aligned_cols=275 Identities=16% Similarity=0.204 Sum_probs=208.8
Q ss_pred CccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCc
Q 008154 204 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDT 283 (576)
Q Consensus 204 ~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (576)
+||+||+|.++++.....++.... .+.+.++|.|+..... .. ....+
T Consensus 118 ~~diihaH~~~~~~~~~~~~~~~~-----~~~~~~~t~Hg~d~~~---~~------~~~~~------------------- 164 (406)
T PRK15427 118 VADVFIAHFGPAGVTAAKLRELGV-----LRGKIATIFHGIDISS---RE------VLNHY------------------- 164 (406)
T ss_pred CCCEEEEcCChHHHHHHHHHHhCC-----CCCCeEEEEccccccc---ch------hhhhh-------------------
Confidence 799999999877666555554211 3456788999752110 00 00000
Q ss_pred CccchhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccc
Q 008154 284 GEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGK 363 (576)
Q Consensus 284 ~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~ 363 (576)
....+..++.||.++++|+...+.+.. .+.+..++.+||||+|.+.|.+....
T Consensus 165 ---~~~~~~~~~~ad~vv~~S~~~~~~l~~----------~g~~~~ki~vi~nGvd~~~f~~~~~~-------------- 217 (406)
T PRK15427 165 ---TPEYQQLFRRGDLMLPISDLWAGRLQK----------MGCPPEKIAVSRMGVDMTRFSPRPVK-------------- 217 (406)
T ss_pred ---hHHHHHHHHhCCEEEECCHHHHHHHHH----------cCCCHHHEEEcCCCCCHHHcCCCccc--------------
Confidence 013445678999999999988876531 23456789999999998877643211
Q ss_pred hHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHH-hcCceE
Q 008154 364 VQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEAT-YKDKYR 440 (576)
Q Consensus 364 ~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~-~~~~~~ 440 (576)
...+.+.|+++||+.+.||++.+++|++.|.+ ++++++|+|+|+ ..++..+.+++. ...++.
T Consensus 218 --------------~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~-~~~~l~~~~~~~~l~~~V~ 282 (406)
T PRK15427 218 --------------APATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGP-WERRLRTLIEQYQLEDVVE 282 (406)
T ss_pred --------------cCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECch-hHHHHHHHHHHcCCCCeEE
Confidence 01245789999999999999999999999975 579999999995 334444444442 233444
Q ss_pred EEccC-ChhHHHHHHhcCCEEEeCCCC------CCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeE
Q 008154 441 GWVGF-NVPISHRITAGCDILLMPSRF------EPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWS 513 (576)
Q Consensus 441 ~~~~~-~~~~~~~ll~~~Dv~v~ps~~------E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~ 513 (576)
+.|+ +.+....+|+.||++|+||.. |++|++++||||||+|||+|+.||.+|++.+ +.+|++
T Consensus 283 -~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~----------~~~G~l 351 (406)
T PRK15427 283 -MPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEA----------DKSGWL 351 (406)
T ss_pred -EeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcC----------CCceEE
Confidence 5555 556677899999999999974 9999999999999999999999999999998 899999
Q ss_pred eCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH---HhhhCCHHHHHHHHHHHHHH
Q 008154 514 FLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFEW 567 (576)
Q Consensus 514 ~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a---~~~~fs~~~~~~~y~~~y~~ 567 (576)
++++|+++++++|.+++. .|++.+.+|++++ +.++|+|+.+++++.++|++
T Consensus 352 v~~~d~~~la~ai~~l~~---~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 352 VPENDAQALAQRLAAFSQ---LDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred eCCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 999999999999998874 2788888888887 46799999999999999975
No 24
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=100.00 E-value=9.6e-35 Score=304.86 Aligned_cols=374 Identities=17% Similarity=0.149 Sum_probs=243.5
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||+|+..++++. ..++|++|+++||+|+++|+.-....
T Consensus 1 ~il~~~~~~p~~---------~~~la~~L~~~G~~v~~~~~~~~~~~--------------------------------- 38 (396)
T cd03818 1 RILFVHQNFPGQ---------FRHLAPALAAQGHEVVFLTEPNAAPP--------------------------------- 38 (396)
T ss_pred CEEEECCCCchh---------HHHHHHHHHHCCCEEEEEecCCCCCC---------------------------------
Confidence 589998775331 46799999999999999997632210
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhc
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 226 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~ 226 (576)
.+|++++++.......+ ..++ |..........+..+.+.+..+....| +|||||+|.+.+. ..+++...
T Consensus 39 ~~~v~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~---~pdvi~~h~~~~~--~~~l~~~~ 107 (396)
T cd03818 39 PGGVRVVRYRPPRGPTS-GTHP-----YLREFEEAVLRGQAVARALLALRAKGF---RPDVIVAHPGWGE--TLFLKDVW 107 (396)
T ss_pred CCCeeEEEecCCCCCCC-CCCc-----cchhHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEECCccch--hhhHHHhC
Confidence 01577777764332211 1221 112222222222233333322222233 8999999975432 22333333
Q ss_pred cCCCCCCCCcEEEEeecCCC-CC---CCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceec
Q 008154 227 RPHGVYKDARSILVIHNLSH-QG---VEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLT 302 (576)
Q Consensus 227 ~~~~~~~~~~~v~t~H~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~ 302 (576)
+++|+|.++|.... ++ .+.+.. +...... ..+ .........+++.||.+++
T Consensus 108 ------~~~~~v~~~~~~~~~~~~~~~~~~~~------~~~~~~~--~~~-----------~~~~~~~~~~~~~ad~vi~ 162 (396)
T cd03818 108 ------PDAPLIGYFEFYYRAEGADVGFDPEF------PPSLDDA--LRL-----------RNRNALILLALAQADAGVS 162 (396)
T ss_pred ------CCCCEEEEEeeeecCCCCCCCCCCCC------CCchhHH--HHH-----------HHhhhHhHHHHHhCCEEEC
Confidence 56888887764310 01 011100 0000000 000 0000124567899999999
Q ss_pred cCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCC
Q 008154 303 VSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDC 382 (576)
Q Consensus 303 vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 382 (576)
+|+..++.+.. ....++.+||||+|.+.|.+.... .........++ ++.
T Consensus 163 ~s~~~~~~~~~------------~~~~ki~vI~ngvd~~~f~~~~~~-----------------~~~~~~~~~~~--~~~ 211 (396)
T cd03818 163 PTRWQRSTFPA------------ELRSRISVIHDGIDTDRLRPDPQA-----------------RLRLPNGRVLT--PGD 211 (396)
T ss_pred CCHHHHhhCcH------------hhccceEEeCCCccccccCCCchh-----------------hhcccccccCC--CCC
Confidence 99988766531 123689999999999888765422 11111112223 466
Q ss_pred CEEEEecc-cccccCHHHHHHHHHhhhc--CCcEEEEEeCCChh-----------hHHHHHHHHHH-hcCceEEEccCCh
Q 008154 383 PLIGFIGR-LDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQ-----------FESWMRDTEAT-YKDKYRGWVGFNV 447 (576)
Q Consensus 383 ~~i~~~Gr-~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~-----------~~~~~~~~~~~-~~~~~~~~~~~~~ 447 (576)
++|+|+|| +.+.||++.+++|+..+.+ ++++++|+|++.+. .+...+.+... ...++.+....+.
T Consensus 212 ~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~V~f~G~v~~ 291 (396)
T cd03818 212 EVITFVARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDLSRVHFLGRVPY 291 (396)
T ss_pred eEEEEECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCcceEEEeCCCCH
Confidence 88999998 9999999999999999875 68999999974311 11222222221 1234444333355
Q ss_pred hHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHH
Q 008154 448 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALR 527 (576)
Q Consensus 448 ~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~ 527 (576)
+....+|+.+|++++||..|++|++++||||||+|||+|+.|+..|++.+ +.+|++++++|+++++++|.
T Consensus 292 ~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~e~i~~----------~~~G~lv~~~d~~~la~~i~ 361 (396)
T cd03818 292 DQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVREVITD----------GENGLLVDFFDPDALAAAVI 361 (396)
T ss_pred HHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCchhhccc----------CCceEEcCCCCHHHHHHHHH
Confidence 66778999999999999999999999999999999999999999999998 89999999999999999999
Q ss_pred HHHHHhhhCHHHHHHHHHHH---HhhhCCHHHHHHHHHH
Q 008154 528 FAIRTYREHKSSWEGLMRRG---MEKDYTWENAAIQYEQ 563 (576)
Q Consensus 528 ~~l~~~~~~~~~~~~~~~~a---~~~~fs~~~~~~~y~~ 563 (576)
+++. |++.+.+|++++ +.++|||++++++|.+
T Consensus 362 ~ll~----~~~~~~~l~~~ar~~~~~~fs~~~~~~~~~~ 396 (396)
T cd03818 362 ELLD----DPARRARLRRAARRTALRYDLLSVCLPRQLA 396 (396)
T ss_pred HHHh----CHHHHHHHHHHHHHHHHHhccHHHHHHHHhC
Confidence 9886 788888888877 3457999999999863
No 25
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=2.7e-34 Score=299.25 Aligned_cols=363 Identities=18% Similarity=0.133 Sum_probs=245.1
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 145 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (576)
.+|+++.... ..||.++++.++++.|.+.|+++++++... .+ .+... .
T Consensus 2 ~~il~ii~~~----~~GG~e~~~~~l~~~l~~~~~~~~v~~~~~-~~-----~~~~~----------------------~ 49 (374)
T TIGR03088 2 PLIVHVVYRF----DVGGLENGLVNLINHLPADRYRHAVVALTE-VS-----AFRKR----------------------I 49 (374)
T ss_pred ceEEEEeCCC----CCCcHHHHHHHHHhhccccccceEEEEcCC-CC-----hhHHH----------------------H
Confidence 4699998652 369999999999999999999999887421 11 11110 0
Q ss_pred eecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhh
Q 008154 146 YREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASK 225 (576)
Q Consensus 146 ~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~ 225 (576)
...|+.++.++.+.. ..... ...+.+.++.. +|||||+|...+.. ..+....
T Consensus 50 ~~~~i~~~~~~~~~~---------------~~~~~----~~~l~~~l~~~--------~~Divh~~~~~~~~-~~~~~~~ 101 (374)
T TIGR03088 50 QRPDVAFYALHKQPG---------------KDVAV----YPQLYRLLRQL--------RPDIVHTRNLAALE-AQLPAAL 101 (374)
T ss_pred HhcCceEEEeCCCCC---------------CChHH----HHHHHHHHHHh--------CCCEEEEcchhHHH-HHHHHHh
Confidence 113566666642210 00111 11222232222 79999999754332 2222222
Q ss_pred ccCCCCCCCCcE-EEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccC
Q 008154 226 YRPHGVYKDARS-ILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 304 (576)
Q Consensus 226 ~~~~~~~~~~~~-v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS 304 (576)
.++|. +.+.|.... +... + ..+. ...+.+...+.+|.++++|
T Consensus 102 -------~~~~~~i~~~h~~~~---~~~~-----~--~~~~--------------------~~~~~~~~~~~~~~~i~vs 144 (374)
T TIGR03088 102 -------AGVPARIHGEHGRDV---FDLD-----G--SNWK--------------------YRWLRRLYRPLIHHYVAVS 144 (374)
T ss_pred -------cCCCeEEEeecCccc---ccch-----h--hHHH--------------------HHHHHHHHHhcCCeEEEeC
Confidence 23443 445453211 0000 0 0000 0012334456789999999
Q ss_pred ccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCE
Q 008154 305 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPL 384 (576)
Q Consensus 305 ~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 384 (576)
+...+.+. ..+..+..++.+|+||+|.+.|.+.... ....++....+ ++.++
T Consensus 145 ~~~~~~~~---------~~~~~~~~~~~vi~ngvd~~~~~~~~~~-----------------~~~~~~~~~~~--~~~~~ 196 (374)
T TIGR03088 145 RDLEDWLR---------GPVKVPPAKIHQIYNGVDTERFHPSRGD-----------------RSPILPPDFFA--DESVV 196 (374)
T ss_pred HHHHHHHH---------HhcCCChhhEEEeccCccccccCCCccc-----------------hhhhhHhhcCC--CCCeE
Confidence 98877653 2234456789999999998877654321 11122222223 46789
Q ss_pred EEEecccccccCHHHHHHHHHhhhc------CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCC
Q 008154 385 IGFIGRLDYQKGIDLIRLAAPEILA------DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCD 458 (576)
Q Consensus 385 i~~~Gr~~~~Kg~~~ll~a~~~L~~------~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~D 458 (576)
|+++||+.+.||++.+++|+..+.+ ++++|+++|+|+. .++..+.+.+......+.+.+... ....+++.+|
T Consensus 197 i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~~-~~~~~~~~~~~~~~~~v~~~g~~~-~~~~~~~~ad 274 (374)
T TIGR03088 197 VGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGPA-RGACEQMVRAAGLAHLVWLPGERD-DVPALMQALD 274 (374)
T ss_pred EEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecCCch-HHHHHHHHHHcCCcceEEEcCCcC-CHHHHHHhcC
Confidence 9999999999999999999998864 2689999999852 344444444332233444555543 3568999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHH
Q 008154 459 ILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKS 538 (576)
Q Consensus 459 v~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~ 538 (576)
++|+||.+|++|++++|||+||+|||+|+.||..|++.+ +.+|++++++|+++++++|.+++. +++
T Consensus 275 i~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~----------~~~g~~~~~~d~~~la~~i~~l~~----~~~ 340 (374)
T TIGR03088 275 LFVLPSLAEGISNTILEAMASGLPVIATAVGGNPELVQH----------GVTGALVPPGDAVALARALQPYVS----DPA 340 (374)
T ss_pred EEEeccccccCchHHHHHHHcCCCEEEcCCCCcHHHhcC----------CCceEEeCCCCHHHHHHHHHHHHh----CHH
Confidence 999999999999999999999999999999999999988 889999999999999999998875 777
Q ss_pred HHHHHHHHH---HhhhCCHHHHHHHHHHHHHHhh
Q 008154 539 SWEGLMRRG---MEKDYTWENAAIQYEQVFEWAS 569 (576)
Q Consensus 539 ~~~~~~~~a---~~~~fs~~~~~~~y~~~y~~~~ 569 (576)
.+.++++++ +.++|||+.++++|.++|++++
T Consensus 341 ~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~ 374 (374)
T TIGR03088 341 ARRAHGAAGRARAEQQFSINAMVAAYAGLYDQLL 374 (374)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhC
Confidence 777777776 4579999999999999998763
No 26
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=100.00 E-value=2.7e-35 Score=280.94 Aligned_cols=365 Identities=20% Similarity=0.243 Sum_probs=261.9
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 145 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (576)
++|+++|..++|. .||++.+++.+++.|.++||.|.+++..|++-.. -+.
T Consensus 1 ~~i~mVsdff~P~--~ggveshiy~lSq~li~lghkVvvithayg~r~g----------------------------iry 50 (426)
T KOG1111|consen 1 SRILMVSDFFYPS--TGGVESHIYALSQCLIRLGHKVVVITHAYGNRVG----------------------------IRY 50 (426)
T ss_pred CcceeeCcccccC--CCChhhhHHHhhcchhhcCCeEEEEeccccCccc----------------------------eee
Confidence 4699999999994 7999999999999999999999999988866311 122
Q ss_pred eecCeEEEEecCCCCCC-C--CCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHH-H
Q 008154 146 YREGVDWVFVDHPSYHR-P--GNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPV-L 221 (576)
Q Consensus 146 ~~~gv~v~~l~~~~~~~-~--~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~-~ 221 (576)
.-+|++||.++-....+ + .++|+. + ...|-.++ +++..|||.|...+.+.-- +
T Consensus 51 lt~glkVyylp~~v~~n~tT~ptv~~~----~--Pllr~i~l-----------------rE~I~ivhghs~fS~lahe~l 107 (426)
T KOG1111|consen 51 LTNGLKVYYLPAVVGYNQTTFPTVFSD----F--PLLRPILL-----------------RERIEIVHGHSPFSYLAHEAL 107 (426)
T ss_pred ecCCceEEEEeeeeeecccchhhhhcc----C--cccchhhh-----------------hhceEEEecCChHHHHHHHHH
Confidence 33679999998433221 1 112321 0 01111111 1257999999866655422 2
Q ss_pred HHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhcccee
Q 008154 222 LASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLL 301 (576)
Q Consensus 222 l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~ 301 (576)
+..+. .|.++|||.|........ ...+.. +....++...|.++
T Consensus 108 ~hart------MGlktVfTdHSlfGfad~----------~si~~n---------------------~ll~~sL~~id~~I 150 (426)
T KOG1111|consen 108 MHART------MGLKTVFTDHSLFGFADI----------GSILTN---------------------KLLPLSLANIDRII 150 (426)
T ss_pred HHHHh------cCceEEEeccccccccch----------hhhhhc---------------------ceeeeeecCCCcEE
Confidence 22222 678999999985221111 111111 12334567889999
Q ss_pred ccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCC
Q 008154 302 TVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPD 381 (576)
Q Consensus 302 ~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 381 (576)
+||..-++... ++. ...+.++.+|||.++...|.|.... .+ ..+
T Consensus 151 cVshtskentv-------lr~--~L~p~kvsvIPnAv~~~~f~P~~~~--------------------------~~-S~~ 194 (426)
T KOG1111|consen 151 CVSHTSKENTV-------LRG--ALAPAKVSVIPNAVVTHTFTPDAAD--------------------------KP-SAD 194 (426)
T ss_pred EEeecCCCceE-------EEe--ccCHhHeeeccceeeccccccCccc--------------------------cC-CCC
Confidence 99997776543 333 2357789999999999999985532 01 123
Q ss_pred CCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHH-HhcCceEEEccCChhHHHHHHhcCC
Q 008154 382 CPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEA-TYKDKYRGWVGFNVPISHRITAGCD 458 (576)
Q Consensus 382 ~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ll~~~D 458 (576)
..+|+.++|+..+||+|++++++.++.+ ++++|+|+|+|+. .....+.+++ .++.++..+...+.+.+++.|...|
T Consensus 195 i~~ivv~sRLvyrKGiDll~~iIp~vc~~~p~vrfii~GDGPk-~i~lee~lEk~~l~~rV~~lG~v~h~~Vr~vl~~G~ 273 (426)
T KOG1111|consen 195 IITIVVASRLVYRKGIDLLLEIIPSVCDKHPEVRFIIIGDGPK-RIDLEEMLEKLFLQDRVVMLGTVPHDRVRDVLVRGD 273 (426)
T ss_pred eeEEEEEeeeeeccchHHHHHHHHHHHhcCCCeeEEEecCCcc-cchHHHHHHHhhccCceEEecccchHHHHHHHhcCc
Confidence 3789999999999999999999999987 7999999999963 2333333332 3455666566567788899999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHH
Q 008154 459 ILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKS 538 (576)
Q Consensus 459 v~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~ 538 (576)
+|++||..|+||++++|||+||+|||+|+.||++|++.+ .. .......++++++++++++..+...|+
T Consensus 274 IFlntSlTEafc~~ivEAaScGL~VVsTrVGGIpeVLP~-----------d~-i~~~~~~~~dl~~~v~~ai~~~~~~p~ 341 (426)
T KOG1111|consen 274 IFLNTSLTEAFCMVIVEAASCGLPVVSTRVGGIPEVLPE-----------DM-ITLGEPGPDDLVGAVEKAITKLRTLPL 341 (426)
T ss_pred EEeccHHHHHHHHHHHHHHhCCCEEEEeecCCccccCCc-----------cc-eeccCCChHHHHHHHHHHHHHhccCch
Confidence 999999999999999999999999999999999999976 22 223445799999999999987766654
Q ss_pred HHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhhCCC
Q 008154 539 SWEGLMRRGMEKDYTWENAAIQYEQVFEWASIDPP 573 (576)
Q Consensus 539 ~~~~~~~~a~~~~fs~~~~~~~y~~~y~~~~~~~~ 573 (576)
... +.+++.|+|+..+++..++|.++...+.
T Consensus 342 ~~h----~~v~~~y~w~dVa~rTekvy~r~~~t~~ 372 (426)
T KOG1111|consen 342 EFH----DRVKKMYSWKDVAERTEKVYDRAATTSI 372 (426)
T ss_pred hHH----HHHHHhccHHHHHHHHHHHHHHHhhccC
Confidence 333 3356789999999999999999876553
No 27
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=100.00 E-value=3.7e-34 Score=300.13 Aligned_cols=372 Identities=17% Similarity=0.165 Sum_probs=239.5
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 145 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (576)
|||+++.+. ...||.++++.++|++|+++||+|+++++..+... .+. .
T Consensus 1 mkIl~~~~~----~~~gG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~----~~~------------------------~ 48 (392)
T cd03805 1 LRVAFIHPD----LGIGGAERLVVDAALALQSRGHEVTIYTSHHDPSH----CFE------------------------E 48 (392)
T ss_pred CeEEEECCC----CCCchHHHHHHHHHHHHHhCCCeEEEEcCCCCchh----cch------------------------h
Confidence 799999654 34699999999999999999999999997532210 000 0
Q ss_pred eec-CeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHh
Q 008154 146 YRE-GVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLAS 224 (576)
Q Consensus 146 ~~~-gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~ 224 (576)
..+ ++.+..+... ..+ ..++ ....+..+...........-. ...++||||+|.+..+. +. +..
T Consensus 49 ~~~~~~~i~~~~~~--~~~-~~~~--------~~~~~~~~~~~~~~~~~~~~~---~~~~~Dvi~~~~~~~~~-~~-~~~ 112 (392)
T cd03805 49 TKDGTLPVRVRGDW--LPR-SIFG--------RFHILCAYLRMLYLALYLLLL---PDEKYDVFIVDQVSACV-PL-LKL 112 (392)
T ss_pred ccCCeeEEEEEeEE--Ecc-hhhH--------hHHHHHHHHHHHHHHHHHHhc---ccCCCCEEEEcCcchHH-HH-HHH
Confidence 011 1333322210 000 0010 000110000000000000000 11278999998755432 22 221
Q ss_pred hccCCCCCCCCcEEEEeecCCCCCCCChhhhhh-cCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceecc
Q 008154 225 KYRPHGVYKDARSILVIHNLSHQGVEPAATYKN-LGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTV 303 (576)
Q Consensus 225 ~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~v 303 (576)
. .+.|+|+++|.+. ..... .+.....+... ...+++.+++.||.++++
T Consensus 113 -~------~~~~~i~~~h~~~-------~~~~~~~~~~~~~~~~~-----------------~~~~e~~~~~~ad~ii~~ 161 (392)
T cd03805 113 -F------SPSKILFYCHFPD-------QLLAQRGSLLKRLYRKP-----------------FDWLEEFTTGMADKIVVN 161 (392)
T ss_pred -h------cCCcEEEEEecCh-------HHhcCCCcHHHHHHHHH-----------------HHHHHHHHhhCceEEEEc
Confidence 1 2378999999542 11110 01101111000 013567788999999999
Q ss_pred CccchhhhccccCCcchhhhhhcc-CCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCC
Q 008154 304 SKGYSWEITTVEGGYGLHEILSSR-KSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDC 382 (576)
Q Consensus 304 S~~~~~~~~~~~~~~~l~~~~~~~-~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 382 (576)
|+.+.+.+. ..+... ..++.+|+||+|.+.|.+.... . ..+....+ ++.
T Consensus 162 s~~~~~~~~---------~~~~~~~~~~~~vi~n~vd~~~~~~~~~~------------------~-~~~~~~~~--~~~ 211 (392)
T cd03805 162 SNFTASVFK---------KTFPSLAKNPREVVYPCVDTDSFESTSED------------------P-DPGLLIPK--SGK 211 (392)
T ss_pred ChhHHHHHH---------HHhcccccCCcceeCCCcCHHHcCccccc------------------c-cccccccC--CCc
Confidence 998887653 222222 2334699999998877654321 0 11112222 467
Q ss_pred CEEEEecccccccCHHHHHHHHHhhhc-----CCcEEEEEeCCChh-------hHHHHHHHHH--HhcCceEEEccCChh
Q 008154 383 PLIGFIGRLDYQKGIDLIRLAAPEILA-----DDIQFVMLGSGDPQ-------FESWMRDTEA--TYKDKYRGWVGFNVP 448 (576)
Q Consensus 383 ~~i~~~Gr~~~~Kg~~~ll~a~~~L~~-----~~~~lii~G~g~~~-------~~~~~~~~~~--~~~~~~~~~~~~~~~ 448 (576)
++++++||+.+.||++.+++|++++.+ ++++|+++|++++. .++..+.+.+ ....++.+....+.+
T Consensus 212 ~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~~~~ 291 (392)
T cd03805 212 KTFLSINRFERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVIFLPSISDS 291 (392)
T ss_pred eEEEEEeeecccCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEEEeCCCChH
Confidence 899999999999999999999999865 37999999998532 1233333333 123455544444566
Q ss_pred HHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHH
Q 008154 449 ISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRF 528 (576)
Q Consensus 449 ~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~ 528 (576)
....+++.||++++||..|+||++++|||+||+|||+++.||..|.+.+ +.+|+++++ |+++++++|.+
T Consensus 292 ~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~----------~~~g~~~~~-~~~~~a~~i~~ 360 (392)
T cd03805 292 QKELLLSSARALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVD----------GETGFLCEP-TPEEFAEAMLK 360 (392)
T ss_pred HHHHHHhhCeEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcHHHhcc----------CCceEEeCC-CHHHHHHHHHH
Confidence 6678999999999999999999999999999999999999999999988 789999876 89999999988
Q ss_pred HHHHhhhCHHHHHHHHHHH---HhhhCCHHHHHHHH
Q 008154 529 AIRTYREHKSSWEGLMRRG---MEKDYTWENAAIQY 561 (576)
Q Consensus 529 ~l~~~~~~~~~~~~~~~~a---~~~~fs~~~~~~~y 561 (576)
++. +++.+.++++++ +.++|||+.+++++
T Consensus 361 l~~----~~~~~~~~~~~a~~~~~~~~s~~~~~~~~ 392 (392)
T cd03805 361 LAN----DPDLADRMGAAGRKRVKEKFSTEAFAERL 392 (392)
T ss_pred HHh----ChHHHHHHHHHHHHHHHHhcCHHHHhhhC
Confidence 875 777888888877 45789999998763
No 28
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=100.00 E-value=2.9e-33 Score=293.66 Aligned_cols=365 Identities=24% Similarity=0.294 Sum_probs=250.4
Q ss_pred cCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEeeecCeEEEEecCCCC
Q 008154 81 TGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSY 160 (576)
Q Consensus 81 ~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~~~~ 160 (576)
.||.++++.+++++|+++||+|+|++.......... ....+++.+++++..+.
T Consensus 20 ~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~ 72 (398)
T cd03800 20 TGGQNVYVLELARALARLGHEVDIFTRRIDDALPPI---------------------------VELAPGVRVVRVPAGPA 72 (398)
T ss_pred CCceeehHHHHHHHHhccCceEEEEEecCCcccCCc---------------------------cccccceEEEecccccc
Confidence 689999999999999999999999986543321100 11224677776653221
Q ss_pred C--CCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhccCCCCCCCCcEE
Q 008154 161 H--RPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSI 238 (576)
Q Consensus 161 ~--~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v 238 (576)
. ....++ .....+...+...+.... .+||+||+|.+..+.....+++. .++|+|
T Consensus 73 ~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~------~~~Div~~~~~~~~~~~~~~~~~-------~~~~~i 128 (398)
T cd03800 73 EYLPKEELW-----------PYLDEFADDLLRFLRREG------GRPDLIHAHYWDSGLVALLLARR-------LGIPLV 128 (398)
T ss_pred cCCChhhcc-----------hhHHHHHHHHHHHHHhcC------CCccEEEEecCccchHHHHHHhh-------cCCceE
Confidence 1 000001 011112222222222111 17999999988777766665543 478999
Q ss_pred EEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCccchhhhccccCCc
Q 008154 239 LVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGY 318 (576)
Q Consensus 239 ~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~ 318 (576)
+|.|+....... ..... ..+ ........++.+++.||.++++|+...+.+.
T Consensus 129 ~~~h~~~~~~~~------~~~~~-~~~----------------~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~------ 179 (398)
T cd03800 129 HTFHSLGAVKRR------HLGAA-DTY----------------EPARRIEAEERLLRAADRVIASTPQEAEELY------ 179 (398)
T ss_pred EEeecccccCCc------ccccc-ccc----------------chhhhhhHHHHHHhhCCEEEEcCHHHHHHHH------
Confidence 999975321100 00000 000 0011234567788999999999998776653
Q ss_pred chhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEEEecccccccCHH
Q 008154 319 GLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGID 398 (576)
Q Consensus 319 ~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~ 398 (576)
........++.+||||+|.+.|.+.... ...++..+.+ ++.++|+|+||+.+.||++
T Consensus 180 ---~~~~~~~~~~~vi~ng~~~~~~~~~~~~------------------~~~~~~~~~~--~~~~~i~~~gr~~~~k~~~ 236 (398)
T cd03800 180 ---SLYGAYPRRIRVVPPGVDLERFTPYGRA------------------EARRARLLRD--PDKPRILAVGRLDPRKGID 236 (398)
T ss_pred ---HHccccccccEEECCCCCccceecccch------------------hhHHHhhccC--CCCcEEEEEcccccccCHH
Confidence 2223345568999999998877654321 1113334444 4678999999999999999
Q ss_pred HHHHHHHhhhc--CCcEEEEEeCCChhhH----HHHHHHHHHh--cCceEEEccCChhHHHHHHhcCCEEEeCCCCCCCc
Q 008154 399 LIRLAAPEILA--DDIQFVMLGSGDPQFE----SWMRDTEATY--KDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCG 470 (576)
Q Consensus 399 ~ll~a~~~L~~--~~~~lii~G~g~~~~~----~~~~~~~~~~--~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g 470 (576)
.+++|+..+.+ ++++++++|++..... ...+.+.+.. ..++.+....+.+.+..+++.||++++||..|++|
T Consensus 237 ~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adi~l~ps~~e~~~ 316 (398)
T cd03800 237 TLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLPALYRAADVFVNPALYEPFG 316 (398)
T ss_pred HHHHHHHHHHHhCCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHHhCCEEEecccccccC
Confidence 99999999975 5899999998853221 1122232322 23444333335566778999999999999999999
Q ss_pred HHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHH--
Q 008154 471 LNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGM-- 548 (576)
Q Consensus 471 ~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a~-- 548 (576)
++++|||++|+|||+++.++..|.+.+ +++|++++++|+++++++|.+++. +++.+.++++++.
T Consensus 317 ~~l~Ea~a~G~Pvi~s~~~~~~e~i~~----------~~~g~~~~~~~~~~l~~~i~~l~~----~~~~~~~~~~~a~~~ 382 (398)
T cd03800 317 LTALEAMACGLPVVATAVGGPRDIVVD----------GVTGLLVDPRDPEALAAALRRLLT----DPALRRRLSRAGLRR 382 (398)
T ss_pred cHHHHHHhcCCCEEECCCCCHHHHccC----------CCCeEEeCCCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHH
Confidence 999999999999999999999999988 789999999999999999999875 7888888888773
Q ss_pred -hhhCCHHHHHHHHH
Q 008154 549 -EKDYTWENAAIQYE 562 (576)
Q Consensus 549 -~~~fs~~~~~~~y~ 562 (576)
.++|||+.++++|.
T Consensus 383 ~~~~~s~~~~~~~~~ 397 (398)
T cd03800 383 ARARYTWERVAARLL 397 (398)
T ss_pred HHHhCCHHHHHHHHh
Confidence 47999999999986
No 29
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1e-34 Score=307.44 Aligned_cols=479 Identities=16% Similarity=0.134 Sum_probs=330.2
Q ss_pred EEEEeec-----cCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccC-----------------
Q 008154 68 IVFVTAE-----AAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDL----------------- 125 (576)
Q Consensus 68 I~~~s~e-----~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~----------------- 125 (576)
++++++| ..| .+.||+|++++++.++++++|.+.+++|..|.+|.+.|. ..+.++.
T Consensus 97 ~~~~~~e~~~~e~~p-~lgGGLGrLAgcfldS~a~Lg~P~~G~Gl~Y~~GyF~Q~-~~dG~Q~E~p~~w~~~~~pwe~~r 174 (750)
T COG0058 97 LGYFLMEFGEHESDP-GLGGGLGRLAGCFLDSAADLGLPLTGYGLRYRYGYFRQS-DVDGWQVELPDEWLKYGNPWEFLR 174 (750)
T ss_pred hhccHHHHhhcccCc-cccccHHHHHHhHHHHHHhcCCCceEEEeeecCCceeee-ccCCceEecchhhhccCCcceeec
Confidence 7888876 566 567999999999999999999999999999999977544 3222221
Q ss_pred -----ceeEEEeecC-CeeEEEEEEeeecCeEEEEecCCC-----CCC--CCCCCCCCCCCCCc-hHHHH---HHHHHHH
Q 008154 126 -----GCCMKICCFG-GEQEIAFFHEYREGVDWVFVDHPS-----YHR--PGNPYGDINGAFGD-NQFRY---TLLCYAA 188 (576)
Q Consensus 126 -----~~~~~~~~~~-~~~~~~~~~~~~~gv~v~~l~~~~-----~~~--~~~~y~~~~~~~~~-~~~r~---~~~~~~~ 188 (576)
...+.|...+ +...+++|+.+++.+++++++... ..+ +..+|++ | ++.|+ .+++.++
T Consensus 175 ~~~a~~~d~~V~g~~~~~~~lrlW~a~~~~~~~~l~~~n~~e~~~~~~~iT~~LYp~------Ds~elRl~Qeyfl~~ag 248 (750)
T COG0058 175 DAEGVPYDVPVPGYDNRVVTLRLWQAQVGRVPLYLLDFNVGENKNDARNITRVLYPG------DSKELRLKQEYFLGSAG 248 (750)
T ss_pred ccCCceeeeeEEeccCcEEEEEEEEEecCccceEeecCCCcccchhhhhHHhhcCCC------CcHHHHHhhhheeeeHH
Confidence 1223344445 567889999999999999998222 333 6679997 6 77887 5777788
Q ss_pred HhhcccCC-CCCCCCCCccEEEeCCCccchHHHHHHh-----hccCCCCCC---CCcEEEEeecCCCCC--CCChhhhhh
Q 008154 189 CEAPLVLP-LGGFTYGEKCIFLVNDWHAGLVPVLLAS-----KYRPHGVYK---DARSILVIHNLSHQG--VEPAATYKN 257 (576)
Q Consensus 189 ~~~~~~~~-~~~~~~~~pDVvH~~~~~~~~~~~~l~~-----~~~~~~~~~---~~~~v~t~H~~~~~~--~~~~~~~~~ 257 (576)
++.+.+++ .... ..++-+.|+||.|++++..-+-+ +...+..+. ...++||+||+.+.+ .||.+++..
T Consensus 249 vq~I~~~~~~~~~-~~~~~~~~lNdtHpa~~i~ElmRll~d~~g~~~~~A~~~~~~~~~yTnHTplpeale~wp~~l~~~ 327 (750)
T COG0058 249 VQDILARGHLEHH-DLDVLADHLNDTHPALAIPELMRLLIDEEGLSWDEAWEIVRKTFVYTNHTPLPEALETWPVELFKK 327 (750)
T ss_pred HHHHHHHhhhccc-cccchhhhhcCCChhHhHHHHHHHHHHHhcCCHHHHHHHHhheeeeecCCCchhhhccCCHHHHHH
Confidence 77776652 2111 22778999999999987443322 211221111 236799999997776 788888843
Q ss_pred c-CCChhhhcc------ccccccccc-ccccCCcCccchhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCC
Q 008154 258 L-GLPSEWYGA------LEWVFPTWA-RTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKS 329 (576)
Q Consensus 258 ~-~~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~ 329 (576)
+ +........ ........+ +.+..+..+.++|..+|++.|..+++||+.+.+-+.+ ++ ++......+.
T Consensus 328 ~lpr~~~ii~~in~~~l~~~~~~~~~~~~~~~~~i~~v~Ma~lal~~S~~vNGVsklH~el~k~-~~---~~~~~~~~p~ 403 (750)
T COG0058 328 LLPRHLQIIYEINARFLPEVRLLYLGDLIRRGSPIEEVNMAVLALVGSHSVNGVSKLHSELSKK-MW---FADFHGLYPE 403 (750)
T ss_pred HhhhhhhhHHHHHhhhhHHHHhhccccccccCCcccceehhhhhhhhhhhhHhHHHHHHHHHHH-HH---HHHhcccCcc
Confidence 3 211111110 000110111 1112223333999999999999999999999876643 22 1222234478
Q ss_pred ceeEecCCCCCCCCCCCCCccccccCCcC---Cccc------------------------chHhH----HHHHHHcCCCC
Q 008154 330 VLNGITNGIDITEWNPSSDEHIASHYSID---DLSG------------------------KVQCK----IALQKELGLPI 378 (576)
Q Consensus 330 ~i~vi~nGvd~~~~~~~~~~~l~~~~~~~---~~~~------------------------~~~~~----~~~~~~~~i~~ 378 (576)
++.-++|||+...|.......|...+.+. .|.. +..++ .......|+..
T Consensus 404 ~i~nvTNGIt~rrWl~~~n~~L~~~~~~~ig~~W~~~~~~l~~l~~~a~~~~~~e~i~~iK~~nk~~La~~i~~~~gi~~ 483 (750)
T COG0058 404 KINNVTNGITPRRWLAPANPGLADLLDEKIGDEWLNDLDILDELLWFADDKAFRELIAEIKRENKKRLAEEIADRTGIEV 483 (750)
T ss_pred ccccccCCcCCchhhhhhhHHHHHHHhhhhhhhhhhhhhhhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhhhhcCCcc
Confidence 89999999999999888777777776655 4432 11111 22333557777
Q ss_pred CCCCCEEEEecccccccCHHHHHHHHHhhhc-------CCcEEEEEeCCChhhHHHHHHHHH--------HhcCceEEEc
Q 008154 379 RPDCPLIGFIGRLDYQKGIDLIRLAAPEILA-------DDIQFVMLGSGDPQFESWMRDTEA--------TYKDKYRGWV 443 (576)
Q Consensus 379 ~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~-------~~~~lii~G~g~~~~~~~~~~~~~--------~~~~~~~~~~ 443 (576)
+|+.++++++.|+.+||+..+.+....+|.+ ++++++|+|+++|.+...++.++. ....+++++.
T Consensus 484 ~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~~lkVvFl~ 563 (750)
T COG0058 484 DPNALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYAAKEIIKLINDVADVINNKLKVVFLP 563 (750)
T ss_pred CCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcccceEEEeC
Confidence 7999999999999999999998877766543 468889999999887766666543 1246789999
Q ss_pred cCChhHHHHHHhcCCEEEeCCC--CCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCC---
Q 008154 444 GFNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLS--- 518 (576)
Q Consensus 444 ~~~~~~~~~ll~~~Dv~v~ps~--~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d--- 518 (576)
+|+...+..++.+|||+.+.|+ .|++|++.|+||.+|.+.|+|.+|++.|+.+.. +++|||.|....
T Consensus 564 nYdvslA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~v--------g~~N~~~fG~~~~~v 635 (750)
T COG0058 564 NYDVSLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHV--------GGENGWIFGETVEEV 635 (750)
T ss_pred CCChhHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhc--------CCCceEEeCCchhhH
Confidence 9999999999999999999998 799999999999999999999999999999621 179999996531
Q ss_pred -------------HHHHHHHHHHHHHHhhh---CHHHHHHHHHHHH---hhhCCHHHHHHHH-HHHHHHh
Q 008154 519 -------------EESMLTALRFAIRTYRE---HKSSWEGLMRRGM---EKDYTWENAAIQY-EQVFEWA 568 (576)
Q Consensus 519 -------------~~~la~~i~~~l~~~~~---~~~~~~~~~~~a~---~~~fs~~~~~~~y-~~~y~~~ 568 (576)
...+...|..+++...+ .| .|..++++++ ...|+.++|...| .+.|-.+
T Consensus 636 ~~~~~~~~~~~~~y~~~~~~v~~~~~~~~~~~~~p-~~~~~~~~~~~sl~~~~~~dr~~~~yd~~~Y~~a 704 (750)
T COG0058 636 DALRADGYDPNALYYELENEVKPVLDEIIDGRFSP-GWKSRFKNLIDSLLPKFGTDRMMVLYDFKAYVPA 704 (750)
T ss_pred HHHHhcccccHHHHHHHhHHHHHHHHHHhcccCCc-ccHHHHHHHHHHhhhccCccHHHHHHHHHHHHHH
Confidence 11222233334332211 12 5777777774 3358877776666 4455444
No 30
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=100.00 E-value=4.4e-36 Score=308.74 Aligned_cols=442 Identities=15% Similarity=0.174 Sum_probs=259.2
Q ss_pred EEeeccCCccccCcHHHHHhhHHHHHHh-CCCcEEEEEecCCCCCCcc-cchhcccc-CceeEEEeecCCeeEEEEEEee
Q 008154 70 FVTAEAAPYSKTGGLGDVCGSLPVALAA-RGHRVMVVSPRYFNGTAAD-ENFTLAKD-LGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 70 ~~s~e~~P~~~~GG~~~~~~~la~~l~~-~G~~V~vi~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
.+|||.++ ++||+.+++..-|+.+++ .|.+..+|||..++..... +.+..... ...+++ .....++.+++++|.
T Consensus 1 E~sWEVcN--KVGGIYTVi~tKA~~~~~e~gd~y~lIGP~~~~~~~~e~e~~e~~~~~l~~~~~-~~~~~Gl~v~~GRWl 77 (633)
T PF05693_consen 1 EVSWEVCN--KVGGIYTVISTKAPTMVEEFGDNYILIGPYNEQNARTEVEEIEPDNPLLKDALE-SMREEGLKVRYGRWL 77 (633)
T ss_dssp EEETTTTS---SSSHHHHHHHHHHHHHHHHGGGEEEEEE--TTTHHHHEEE--SSSGGHHHHHH-HHHHTT-EEEEEEES
T ss_pred Cchhhhcc--ccCCeehhhhccHHHHHHHHCCeEEEECCCCCcccCCCCCcCCCCCHHHHHHHH-HHHhCCCeEEEecee
Confidence 37899998 699999999999999999 7999999999876531110 00000000 000010 123456788999999
Q ss_pred ecC-eEEEEecCCC-CCCCCCCCCCCC-----------CCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCC
Q 008154 147 REG-VDWVFVDHPS-YHRPGNPYGDIN-----------GAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDW 213 (576)
Q Consensus 147 ~~g-v~v~~l~~~~-~~~~~~~y~~~~-----------~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~ 213 (576)
++| +.++++|..+ +....++++..| ++| ++...|.++...+++.+...... ...-|.|+|||
T Consensus 78 I~G~P~vIL~D~~s~~~~ldeik~~lW~~~gIdS~~~~~dy-nea~~Fgyava~fi~~f~~~~~~----~~~ViaHfHEW 152 (633)
T PF05693_consen 78 IPGRPIVILFDFGSFFWKLDEIKGELWELFGIDSPHGDGDY-NEAVMFGYAVAWFIEEFYKFYEE----KPKVIAHFHEW 152 (633)
T ss_dssp STT--EEEEEEGGGGGGGHHHHHHHHHHHH-----TT-HHH-HHHHHHHHHHHHHHHHHHHH-S-----SEEEEEEEESG
T ss_pred ECCcCeEEEEeCchHHHHHHHHHHHHHHHcCCCCCCCCcch-hHHHHHHHHHHHHHHHHHHhhcC----CCcEEEEechH
Confidence 998 7788888433 222333333333 233 44556666666666655443221 25679999999
Q ss_pred ccchHHHHHHhhccCCCCCCCCcEEEEeecCC------CCC---------CCChhhhhhcCCChhhhccccccccccccc
Q 008154 214 HAGLVPVLLASKYRPHGVYKDARSILVIHNLS------HQG---------VEPAATYKNLGLPSEWYGALEWVFPTWART 278 (576)
Q Consensus 214 ~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~------~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (576)
+++....+++++. +.+.+|||||++. ..+ +.++++...+++
T Consensus 153 maG~gll~lr~~~------~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i------------------ 208 (633)
T PF05693_consen 153 MAGVGLLYLRKRK------PDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNI------------------ 208 (633)
T ss_dssp GGTTHHHHHHHTT-------SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-------------------
T ss_pred hHhHHHHHHhccC------CCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccc------------------
Confidence 9999888888876 7899999999983 100 001111112222
Q ss_pred ccCCcCccchhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcC
Q 008154 279 HALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSID 358 (576)
Q Consensus 279 ~~~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~ 358 (576)
....++|+.|++.||++++||+.++.|+. .++.+.++ .|+|||++...|.....- ...
T Consensus 209 -----~~k~~iEraaA~~AdvFTTVSeITa~Ea~---------~LL~r~pD--vV~pNGl~v~~~~~~~ef------qnl 266 (633)
T PF05693_consen 209 -----YHKHSIERAAAHYADVFTTVSEITAKEAE---------HLLKRKPD--VVTPNGLNVDKFPALHEF------QNL 266 (633)
T ss_dssp -----HHHHHHHHHHHHHSSEEEESSHHHHHHHH---------HHHSS--S--EE----B-GGGTSSTTHH------HHH
T ss_pred -----hHHHHHHHHHHHhcCeeeehhhhHHHHHH---------HHhCCCCC--EEcCCCccccccccchHH------HHH
Confidence 12357999999999999999999999984 35565555 799999998766543210 000
Q ss_pred CcccchHhHHHHHHH-cCC-CCC-CCCCEEEEecccc-cccCHHHHHHHHHhhhc----C--C---cEEEEEeCCC----
Q 008154 359 DLSGKVQCKIALQKE-LGL-PIR-PDCPLIGFIGRLD-YQKGIDLIRLAAPEILA----D--D---IQFVMLGSGD---- 421 (576)
Q Consensus 359 ~~~~~~~~~~~~~~~-~~i-~~~-~~~~~i~~~Gr~~-~~Kg~~~ll~a~~~L~~----~--~---~~lii~G~g~---- 421 (576)
.-.++..-.+..+.. +|- ..+ ++.+++..+||++ .+||+|.+|+|+.+|.. . + +-|+|+=...
T Consensus 267 ~~~~k~ki~~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~ 346 (633)
T PF05693_consen 267 HAKAKEKIHEFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFN 346 (633)
T ss_dssp HHHHHHHHHHHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-
T ss_pred HHHHHHHHHHHHHHHhcccCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcC
Confidence 001122222233332 231 111 3578889999999 79999999999999854 1 2 2344432110
Q ss_pred h----------hh----HHHHHHHHH------------------------------------------------------
Q 008154 422 P----------QF----ESWMRDTEA------------------------------------------------------ 433 (576)
Q Consensus 422 ~----------~~----~~~~~~~~~------------------------------------------------------ 433 (576)
. .. .+.++.+.+
T Consensus 347 ve~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpI 426 (633)
T PF05693_consen 347 VESLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPI 426 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HH
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHH
Confidence 0 00 000000100
Q ss_pred -------------HhcCceEEEccC-C--hh----HHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCcccccc
Q 008154 434 -------------TYKDKYRGWVGF-N--VP----ISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRD 493 (576)
Q Consensus 434 -------------~~~~~~~~~~~~-~--~~----~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e 493 (576)
..++++++...| + +. .-.+++.+||+.|+||+|||||+|++|+.++|+|.|+|+..|+..
T Consensus 427 Ln~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~ 506 (633)
T PF05693_consen 427 LNMIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGC 506 (633)
T ss_dssp HHHHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHH
T ss_pred HHHHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHH
Confidence 000223322222 0 00 012456999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCcceeEe---CCCCHHHHHHHHHHHHHHhhh-CHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHH
Q 008154 494 TVENFNPFAREGSGEGTGWSF---LPLSEESMLTALRFAIRTYRE-HKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEW 567 (576)
Q Consensus 494 ~i~~~~~~~~~~~~~~~G~~~---~~~d~~~la~~i~~~l~~~~~-~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~ 567 (576)
++.+..... ...|+.+ ...++++.+++|.+.+..+.. +++++..+..++ +++.++|+++...|.++|+.
T Consensus 507 ~~~~~~~~~-----~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay~~ 581 (633)
T PF05693_consen 507 WMQEHIEDP-----EEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAYDL 581 (633)
T ss_dssp HHHTTS-HH-----GGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHHHH
T ss_pred HHHHhhccC-----cCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 988632211 2345554 445789999999999987754 455555555555 67899999999999999998
Q ss_pred hhh
Q 008154 568 ASI 570 (576)
Q Consensus 568 ~~~ 570 (576)
+++
T Consensus 582 AL~ 584 (633)
T PF05693_consen 582 ALR 584 (633)
T ss_dssp HHH
T ss_pred HHH
Confidence 875
No 31
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=100.00 E-value=1.6e-32 Score=281.18 Aligned_cols=330 Identities=20% Similarity=0.202 Sum_probs=226.8
Q ss_pred ceEEEEeeccCC--ccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEE
Q 008154 66 YNIVFVTAEAAP--YSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFF 143 (576)
Q Consensus 66 mkI~~~s~e~~P--~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (576)
|||++++..+.| ....||.++++.+++++|.+.||+|.++++.......
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~----------------------------- 51 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARGHEVTLFASGDSKTAA----------------------------- 51 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcCceEEEEecCCCCccc-----------------------------
Confidence 899999998643 1358999999999999999999999999975322100
Q ss_pred EeeecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHH
Q 008154 144 HEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLA 223 (576)
Q Consensus 144 ~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~ 223 (576)
............. .. ..............+.+... +|||||+|.+..... +.
T Consensus 52 -------~~~~~~~~~~~~~--~~--------~~~~~~~~~~~~~~~~~~~~--------~~Divh~~~~~~~~~---~~ 103 (335)
T cd03802 52 -------PLVPVVPEPLRLD--AP--------GRDRAEAEALALAERALAAG--------DFDIVHNHSLHLPLP---FA 103 (335)
T ss_pred -------ceeeccCCCcccc--cc--------hhhHhhHHHHHHHHHHHhcC--------CCCEEEecCcccchh---hh
Confidence 0000000000000 00 00011111112222222222 799999998776654 12
Q ss_pred hhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceecc
Q 008154 224 SKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTV 303 (576)
Q Consensus 224 ~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~v 303 (576)
+. .++|+|+|.|+....... ........++.++++
T Consensus 104 -~~------~~~~~v~~~h~~~~~~~~--------------------------------------~~~~~~~~~~~~~~~ 138 (335)
T cd03802 104 -RP------LPVPVVTTLHGPPDPELL--------------------------------------KLYYAARPDVPFVSI 138 (335)
T ss_pred -cc------cCCCEEEEecCCCCcccc--------------------------------------hHHHhhCcCCeEEEe
Confidence 11 578999999976321000 012234567889999
Q ss_pred CccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCC
Q 008154 304 SKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCP 383 (576)
Q Consensus 304 S~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 383 (576)
|+...+... . ..++.+||||+|.+.|.+.. .+..
T Consensus 139 s~~~~~~~~------------~--~~~~~vi~ngvd~~~~~~~~--------------------------------~~~~ 172 (335)
T cd03802 139 SDAQRRPWP------------P--LPWVATVHNGIDLDDYPFRG--------------------------------PKGD 172 (335)
T ss_pred cHHHHhhcc------------c--ccccEEecCCcChhhCCCCC--------------------------------CCCC
Confidence 987665432 1 16789999999988776522 2456
Q ss_pred EEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHH--hcCceEEEccCChhHHHHHHhcCCEEE
Q 008154 384 LIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEAT--YKDKYRGWVGFNVPISHRITAGCDILL 461 (576)
Q Consensus 384 ~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ll~~~Dv~v 461 (576)
.++|+||+.+.||++.+++++.+. +++++|+|+++. .........+. ...++.+....+.+....+++.+|+++
T Consensus 173 ~i~~~Gr~~~~Kg~~~li~~~~~~---~~~l~i~G~~~~-~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~~v 248 (335)
T cd03802 173 YLLFLGRISPEKGPHLAIRAARRA---GIPLKLAGPVSD-PDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARALL 248 (335)
T ss_pred EEEEEEeeccccCHHHHHHHHHhc---CCeEEEEeCCCC-HHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcEEE
Confidence 899999999999999999998764 799999999953 23333333333 245555444335555668999999999
Q ss_pred eCCCC-CCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHH
Q 008154 462 MPSRF-EPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSW 540 (576)
Q Consensus 462 ~ps~~-E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~ 540 (576)
+||.+ |+||++++||||||+|||+++.||..|.+.+ +.+|+++++ +++++++|.++.. .+.
T Consensus 249 ~ps~~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~----------~~~g~l~~~--~~~l~~~l~~l~~----~~~-- 310 (335)
T cd03802 249 FPILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVED----------GVTGFLVDS--VEELAAAVARADR----LDR-- 310 (335)
T ss_pred eCCcccCCcchHHHHHHhcCCCEEEeCCCCchhheeC----------CCcEEEeCC--HHHHHHHHHHHhc----cHH--
Confidence 99984 9999999999999999999999999999998 789999975 8999999988754 221
Q ss_pred HHHHHHHHhhhCCHHHHHHHHHHHHH
Q 008154 541 EGLMRRGMEKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 541 ~~~~~~a~~~~fs~~~~~~~y~~~y~ 566 (576)
+.+++.+.++|||++++++|.++|+
T Consensus 311 -~~~~~~~~~~~s~~~~~~~~~~~y~ 335 (335)
T cd03802 311 -AACRRRAERRFSAARMVDDYLALYR 335 (335)
T ss_pred -HHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 2233445689999999999999984
No 32
>PRK10125 putative glycosyl transferase; Provisional
Probab=100.00 E-value=7.5e-33 Score=288.88 Aligned_cols=212 Identities=13% Similarity=0.084 Sum_probs=153.0
Q ss_pred HHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHH
Q 008154 294 IVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 373 (576)
Q Consensus 294 ~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 373 (576)
.+.++.++++|+++++.+. ..++ ..++.+||||||++.+.+.... ...
T Consensus 188 ~~~~~~iV~~S~~l~~~~~---------~~~~--~~~i~vI~NGid~~~~~~~~~~------------------~~~--- 235 (405)
T PRK10125 188 LALGCQFISPSQHVADAFN---------SLYG--PGRCRIINNGIDMATEAILAEL------------------PPV--- 235 (405)
T ss_pred hhcCcEEEEcCHHHHHHHH---------HHcC--CCCEEEeCCCcCcccccccccc------------------ccc---
Confidence 3456889999999887753 1222 4689999999997533221100 000
Q ss_pred cCCCCCCCCCEEEEeccc-c-cccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccC--ChhH
Q 008154 374 LGLPIRPDCPLIGFIGRL-D-YQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF--NVPI 449 (576)
Q Consensus 374 ~~i~~~~~~~~i~~~Gr~-~-~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 449 (576)
..+ ++..+|+++|+. . +.||++.+++|+..+. ++++|+++|++++.. ..++. ..++ +...
T Consensus 236 -~~~--~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~-~~~~L~ivG~g~~~~-----------~~~v~-~~g~~~~~~~ 299 (405)
T PRK10125 236 -RET--QGKPKIAVVAHDLRYDGKTDQQLVREMMALG-DKIELHTFGKFSPFT-----------AGNVV-NHGFETDKRK 299 (405)
T ss_pred -ccC--CCCCEEEEEEeccccCCccHHHHHHHHHhCC-CCeEEEEEcCCCccc-----------ccceE-EecCcCCHHH
Confidence 001 356789999994 3 6799999999999874 579999999985321 11222 2333 3445
Q ss_pred HHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHH
Q 008154 450 SHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFA 529 (576)
Q Consensus 450 ~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~ 529 (576)
+..+|+.+|++|+||.+|+||++++||||||+|||+|+.||.+|++.+ .+|++++++|++++++.+...
T Consensus 300 l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~-----------~~G~lv~~~d~~~La~~~~~~ 368 (405)
T PRK10125 300 LMSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQK-----------SGGKTVSEEEVLQLAQLSKPE 368 (405)
T ss_pred HHHHHHhCCEEEECCccccCcCHHHHHHHcCCCEEEeCCCChHHhEeC-----------CcEEEECCCCHHHHHhccCHH
Confidence 668999999999999999999999999999999999999999999876 499999999999999854432
Q ss_pred HHHhhhCHHH--HHHHHHHHHhhhCCHHHHHHHHHHHHHHh
Q 008154 530 IRTYREHKSS--WEGLMRRGMEKDYTWENAAIQYEQVFEWA 568 (576)
Q Consensus 530 l~~~~~~~~~--~~~~~~~a~~~~fs~~~~~~~y~~~y~~~ 568 (576)
+. +... ....+++.+.++||++.|+++|+++|+++
T Consensus 369 ~~----~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~l 405 (405)
T PRK10125 369 IA----QAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL 405 (405)
T ss_pred HH----HHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 21 1100 01112333567899999999999999863
No 33
>PLN02846 digalactosyldiacylglycerol synthase
Probab=100.00 E-value=9.5e-33 Score=286.43 Aligned_cols=381 Identities=13% Similarity=0.080 Sum_probs=232.0
Q ss_pred CCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCC-CcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEE
Q 008154 64 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG-HRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAF 142 (576)
Q Consensus 64 ~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G-~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (576)
++|||++||..|+|+ .+|+.+....++..|+++| |+|++|.|.++.... ...+... ..+..+. .+..+++.
T Consensus 3 ~~mrIaivTdt~lP~--vnGva~s~~~~a~~L~~~G~heV~vvaP~~~~~~~-~~~~~~~----~~f~~~~-~~e~~~~~ 74 (462)
T PLN02846 3 KKQHIAIFTTASLPW--MTGTAVNPLFRAAYLAKDGDREVTLVIPWLSLKDQ-KLVYPNK----ITFSSPS-EQEAYVRQ 74 (462)
T ss_pred CCCEEEEEEcCCCCC--CCCeeccHHHHHHHHHhcCCcEEEEEecCCccccc-ccccccc----ccccCch-hhhhhhhh
Confidence 469999999999996 7999999999999999999 899999998764311 0111100 0000000 00111111
Q ss_pred EEeeecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCC-ccchH--H
Q 008154 143 FHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDW-HAGLV--P 219 (576)
Q Consensus 143 ~~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~-~~~~~--~ 219 (576)
|. +-++++++..++. .|.+. | ....+.......+.+.+... +|||||+|+. +.+.. +
T Consensus 75 ~~----~~~v~r~~s~~~p----~yp~r---~-~~~~r~~~~~~~i~~~l~~~--------~pDVIHv~tP~~LG~~~~g 134 (462)
T PLN02846 75 WL----EERISFLPKFSIK----FYPGK---F-STDKRSILPVGDISETIPDE--------EADIAVLEEPEHLTWYHHG 134 (462)
T ss_pred hc----cCeEEEecccccc----cCccc---c-cccccccCChHHHHHHHHhc--------CCCEEEEcCchhhhhHHHH
Confidence 11 1123333322211 12210 0 00011111222333443323 8999999973 33332 1
Q ss_pred HHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcC--CChhhhcccccccccccccccCCcCccchhHHHHHHhc
Q 008154 220 VLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLG--LPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTA 297 (576)
Q Consensus 220 ~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a 297 (576)
..+.++ ..+ +|.|.|+.. .+..++.+ .....+....+ .+.+. .+|
T Consensus 135 ~~~~~k-------~~~-vV~tyHT~y------~~Y~~~~~~g~~~~~l~~~~~-----------------~~~~r--~~~ 181 (462)
T PLN02846 135 KRWKTK-------FRL-VIGIVHTNY------LEYVKREKNGRVKAFLLKYIN-----------------SWVVD--IYC 181 (462)
T ss_pred HHHHhc-------CCc-EEEEECCCh------HHHHHHhccchHHHHHHHHHH-----------------HHHHH--Hhc
Confidence 222221 234 888999841 11111111 10111111000 11111 248
Q ss_pred cceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCC
Q 008154 298 DRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLP 377 (576)
Q Consensus 298 d~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 377 (576)
|.++++|....+ + . ..+...++|||...|.+.... .++..+ +
T Consensus 182 d~vi~pS~~~~~-l-------------~---~~~i~~v~GVd~~~f~~~~~~--------------------~~~~~~-~ 223 (462)
T PLN02846 182 HKVIRLSAATQD-Y-------------P---RSIICNVHGVNPKFLEIGKLK--------------------LEQQKN-G 223 (462)
T ss_pred CEEEccCHHHHH-H-------------h---hCEEecCceechhhcCCCccc--------------------HhhhcC-C
Confidence 999999974432 2 1 123445689998877655321 112222 2
Q ss_pred CCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHh
Q 008154 378 IRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA 455 (576)
Q Consensus 378 ~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 455 (576)
++.-...++|+||+.+.||++.|++|++.+.+ ++++|+|+|+|+ ..++..+ ..........++.++.... .+++
T Consensus 224 ~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp-~~~~L~~-~a~~l~l~~~vf~G~~~~~--~~~~ 299 (462)
T PLN02846 224 EQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGE-DSDEVKA-AAEKLELDVRVYPGRDHAD--PLFH 299 (462)
T ss_pred CCCcceEEEEEecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCc-cHHHHHH-HHHhcCCcEEEECCCCCHH--HHHH
Confidence 11113468999999999999999999999865 589999999996 3344444 4444443444477764432 6999
Q ss_pred cCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhh
Q 008154 456 GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYRE 535 (576)
Q Consensus 456 ~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~ 535 (576)
.+|+||+||.+|++|++++||||||+|||+++.++ .+++.+ +.+|+.+ .|.+++++++.+++..
T Consensus 300 ~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~----------~~ng~~~--~~~~~~a~ai~~~l~~--- 363 (462)
T PLN02846 300 DYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQ----------FPNCRTY--DDGKGFVRATLKALAE--- 363 (462)
T ss_pred hCCEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeec----------CCceEec--CCHHHHHHHHHHHHcc---
Confidence 99999999999999999999999999999999997 588887 8899988 4789999999999862
Q ss_pred CHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHH
Q 008154 536 HKSSWEGLMRRGMEKDYTWENAAIQYEQVFEW 567 (576)
Q Consensus 536 ~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y~~ 567 (576)
+++.. ..+ ..+.|||+..++++.+.|+-
T Consensus 364 ~~~~~---~~~-a~~~~SWe~~~~~l~~~~~~ 391 (462)
T PLN02846 364 EPAPL---TDA-QRHELSWEAATERFLRVADL 391 (462)
T ss_pred CchhH---HHH-HHHhCCHHHHHHHHHHHhcc
Confidence 33222 222 23599999999999999974
No 34
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=100.00 E-value=4.9e-32 Score=282.03 Aligned_cols=360 Identities=15% Similarity=0.074 Sum_probs=235.7
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++|+..+ + .||+++++.++++.|.+.||+|.++++.-..+ .+...-. + ...
T Consensus 1 ki~~~~~~~-~---~GGv~~~~~~l~~~l~~~g~~v~~~~~~~~~~-----~~~~~~~----~--------------~~~ 53 (372)
T cd03792 1 KVLHVNSTP-Y---GGGVAEILHSLVPLMRDLGVDTRWEVIKGDPE-----FFNVTKK----F--------------HNA 53 (372)
T ss_pred CeEEEeCCC-C---CCcHHHHHHHHHHHHHHcCCCceEEecCCChh-----HHHHHHH----h--------------hHh
Confidence 699998763 3 69999999999999999999999998742211 1110000 0 000
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhc
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 226 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~ 226 (576)
..|.+. + .....+..+.. ......... ....+|||||+|++.+..++.... .
T Consensus 54 ~~g~~~--------------~-------~~~~~~~~~~~-~~~~~~~~~----~~~~~~Dvv~~h~~~~~~~~~~~~--~ 105 (372)
T cd03792 54 LQGADI--------------E-------LSEEEKEIYLE-WNEENAERP----LLDLDADVVVIHDPQPLALPLFKK--K 105 (372)
T ss_pred hcCCCC--------------C-------CCHHHHHHHHH-HHHHHhccc----cccCCCCEEEECCCCchhHHHhhh--c
Confidence 001111 0 01111111111 111111100 112279999999877433222211 1
Q ss_pred cCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCcc
Q 008154 227 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 306 (576)
Q Consensus 227 ~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~ 306 (576)
.++|+|+++|+..... .... ..+.+..++.+|.+++.|+.
T Consensus 106 ------~~~~~i~~~H~~~~~~------------~~~~----------------------~~~~~~~~~~~d~~i~~~~~ 145 (372)
T cd03792 106 ------RGRPWIWRCHIDLSSP------------NRRV----------------------WDFLQPYIEDYDAAVFHLPE 145 (372)
T ss_pred ------CCCeEEEEeeeecCCC------------cHHH----------------------HHHHHHHHHhCCEEeecHHH
Confidence 3689999999752110 0000 12334556788998888742
Q ss_pred chhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEE
Q 008154 307 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 386 (576)
Q Consensus 307 ~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~ 386 (576)
... . .....++ +||||||........ .........++.++++ ++.++|+
T Consensus 146 ~~~------------~--~~~~~~~-vipngvd~~~~~~~~--------------~~~~~~~~~~~~~~~~--~~~~~i~ 194 (372)
T cd03792 146 YVP------------P--QVPPRKV-IIPPSIDPLSGKNRE--------------LSPADIEYILEKYGID--PERPYIT 194 (372)
T ss_pred hcC------------C--CCCCceE-EeCCCCCCCccccCC--------------CCHHHHHHHHHHhCCC--CCCcEEE
Confidence 221 1 1123344 999999964311111 0111244567778876 5788999
Q ss_pred EecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChh---hHHHHHHHHH--HhcCceEEEccC--ChhHHHHHHhcC
Q 008154 387 FIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQ---FESWMRDTEA--TYKDKYRGWVGF--NVPISHRITAGC 457 (576)
Q Consensus 387 ~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~---~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~ll~~~ 457 (576)
++||+.+.||++.+++|+..+.+ ++++|+++|+|+.. .....+.+.+ ....++.++... +.+.+..+++.+
T Consensus 195 ~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~a 274 (372)
T cd03792 195 QVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPDIHVLTLPPVSDLEVNALQRAS 274 (372)
T ss_pred EEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHhC
Confidence 99999999999999999999865 58999999998532 2222333332 223344433322 556777899999
Q ss_pred CEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCH
Q 008154 458 DILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHK 537 (576)
Q Consensus 458 Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~ 537 (576)
|++++||.+|+||++++||||||+|||+++.|+..+.+.+ +.+|++++ +.++++++|.+++. ++
T Consensus 275 d~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~----------~~~g~~~~--~~~~~a~~i~~ll~----~~ 338 (372)
T cd03792 275 TVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIED----------GETGFLVD--TVEEAAVRILYLLR----DP 338 (372)
T ss_pred eEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhccc----------CCceEEeC--CcHHHHHHHHHHHc----CH
Confidence 9999999999999999999999999999999999999988 89999986 45677777777764 78
Q ss_pred HHHHHHHHHH---HhhhCCHHHHHHHHHHHHHHh
Q 008154 538 SSWEGLMRRG---MEKDYTWENAAIQYEQVFEWA 568 (576)
Q Consensus 538 ~~~~~~~~~a---~~~~fs~~~~~~~y~~~y~~~ 568 (576)
+.+.+|++++ +.++|+|+.++++|.++|+.+
T Consensus 339 ~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~ 372 (372)
T cd03792 339 ELRRKMGANAREHVRENFLITRHLKDYLYLISKL 372 (372)
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHhC
Confidence 8888888877 356899999999999999863
No 35
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=7.5e-32 Score=279.20 Aligned_cols=356 Identities=19% Similarity=0.191 Sum_probs=236.2
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++.+++| ...||+++++.+++++|+++||+|.+++........ ...
T Consensus 1 ~i~~i~~~~~~-~~~gG~~~~~~~la~~L~~~g~~v~v~~~~~~~~~~-----------------------------~~~ 50 (363)
T cd04955 1 KIAIIGTRGIP-AKYGGFETFVEELAPRLVARGHEVTVYCRSPYPKQK-----------------------------ETE 50 (363)
T ss_pred CeEEEecCcCC-cccCcHHHHHHHHHHHHHhcCCCEEEEEccCCCCCc-----------------------------ccc
Confidence 69999887666 358999999999999999999999999865322110 112
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhc
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 226 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~ 226 (576)
..|++++.++.+.... . ..+..-......... . ..++|++|............+. .
T Consensus 51 ~~~i~~~~~~~~~~~~----~-----------~~~~~~~~~~~~~~~-~------~~~~~~i~~~~~~~~~~~~~~~--~ 106 (363)
T cd04955 51 YNGVRLIHIPAPEIGG----L-----------GTIIYDILAILHALF-V------KRDIDHVHALGPAIAPFLPLLR--L 106 (363)
T ss_pred cCCceEEEcCCCCccc----h-----------hhhHHHHHHHHHHHh-c------cCCeEEEEecCccHHHHHHHHH--h
Confidence 2577877775332110 0 000000011111111 0 0145555554433322222221 1
Q ss_pred cCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCcc
Q 008154 227 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 306 (576)
Q Consensus 227 ~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~ 306 (576)
.++|+++++|+..+... ..+.....+ ...+++.+++.||.++++|+.
T Consensus 107 ------~~~~~v~~~h~~~~~~~-------~~~~~~~~~--------------------~~~~~~~~~~~ad~ii~~s~~ 153 (363)
T cd04955 107 ------KGKKVVVNMDGLEWKRA-------KWGRPAKRY--------------------LKFGEKLAVKFADRLIADSPG 153 (363)
T ss_pred ------cCCCEEEEccCcceeec-------ccccchhHH--------------------HHHHHHHHHhhccEEEeCCHH
Confidence 46899999997532110 000000000 012456678899999999999
Q ss_pred chhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEE
Q 008154 307 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 386 (576)
Q Consensus 307 ~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~ 386 (576)
..+.+. ..++.. ..+||||+|...+.+. ....+..+++ +...++
T Consensus 154 ~~~~~~---------~~~~~~---~~~i~ngv~~~~~~~~---------------------~~~~~~~~~~---~~~~i~ 197 (363)
T cd04955 154 IKEYLK---------EKYGRD---STYIPYGADHVVSSEE---------------------DEILKKYGLE---PGRYYL 197 (363)
T ss_pred HHHHHH---------HhcCCC---CeeeCCCcChhhcchh---------------------hhhHHhcCCC---CCcEEE
Confidence 887763 122222 2899999997765431 1223344544 335688
Q ss_pred EecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHH--HhcCceEEEccC-ChhHHHHHHhcCCEEEeC
Q 008154 387 FIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEA--TYKDKYRGWVGF-NVPISHRITAGCDILLMP 463 (576)
Q Consensus 387 ~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~ll~~~Dv~v~p 463 (576)
++||+.+.||++.+++|+..+.. +++|+++|+++. .....+.+.+ ....++. +.|+ +.+....+++.+|++++|
T Consensus 198 ~~G~~~~~Kg~~~li~a~~~l~~-~~~l~ivG~~~~-~~~~~~~~~~~~~~~~~V~-~~g~~~~~~~~~~~~~ad~~v~p 274 (363)
T cd04955 198 LVGRIVPENNIDDLIEAFSKSNS-GKKLVIVGNADH-NTPYGKLLKEKAAADPRII-FVGPIYDQELLELLRYAALFYLH 274 (363)
T ss_pred EEecccccCCHHHHHHHHHhhcc-CceEEEEcCCCC-cchHHHHHHHHhCCCCcEE-EccccChHHHHHHHHhCCEEEeC
Confidence 99999999999999999998865 899999999843 2333334432 2334454 4444 555566899999999999
Q ss_pred CCC-CCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHH
Q 008154 464 SRF-EPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEG 542 (576)
Q Consensus 464 s~~-E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~ 542 (576)
|.. |++|++++|||+||+|||+|+.|+..|.+.+ +|+.++++|. ++++|..++. +++.+.+
T Consensus 275 s~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~------------~g~~~~~~~~--l~~~i~~l~~----~~~~~~~ 336 (363)
T cd04955 275 GHSVGGTNPSLLEAMAYGCPVLASDNPFNREVLGD------------KAIYFKVGDD--LASLLEELEA----DPEEVSA 336 (363)
T ss_pred CccCCCCChHHHHHHHcCCCEEEecCCccceeecC------------CeeEecCchH--HHHHHHHHHh----CHHHHHH
Confidence 998 9999999999999999999999999998853 7888887665 8888888875 7777788
Q ss_pred HHHHH---HhhhCCHHHHHHHHHHHHH
Q 008154 543 LMRRG---MEKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 543 ~~~~a---~~~~fs~~~~~~~y~~~y~ 566 (576)
+++++ +.++|||+.++++|.++|+
T Consensus 337 ~~~~~~~~~~~~fs~~~~~~~~~~~y~ 363 (363)
T cd04955 337 MAKAARERIREKYTWEKIADQYEELYK 363 (363)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 87776 3457999999999999884
No 36
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=100.00 E-value=4.5e-32 Score=280.11 Aligned_cols=338 Identities=21% Similarity=0.247 Sum_probs=235.4
Q ss_pred ccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEeeecCeEEEEecCCC
Q 008154 80 KTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPS 159 (576)
Q Consensus 80 ~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~~~ 159 (576)
..||+++++.+++++|++.||+|.++++.... . ... ...+++++.++...
T Consensus 8 ~~gG~e~~~~~l~~~L~~~g~~v~v~~~~~~~---~-~~~--------------------------~~~~~~~~~~~~~~ 57 (355)
T cd03819 8 ESGGVERGTLELARALVERGHRSLVASAGGRL---V-AEL--------------------------EAEGSRHIKLPFIS 57 (355)
T ss_pred ccCcHHHHHHHHHHHHHHcCCEEEEEcCCCch---H-HHH--------------------------HhcCCeEEEccccc
Confidence 35999999999999999999999999853211 0 000 01234444332110
Q ss_pred CCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEE
Q 008154 160 YHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSIL 239 (576)
Q Consensus 160 ~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~ 239 (576)
. ..+ ..........+.+... +||+||+|.....+...+.... .++|+|+
T Consensus 58 ---~-~~~------------~~~~~~~~l~~~~~~~--------~~dii~~~~~~~~~~~~~~~~~-------~~~~~i~ 106 (355)
T cd03819 58 ---K-NPL------------RILLNVARLRRLIREE--------KVDIVHARSRAPAWSAYLAARR-------TRPPFVT 106 (355)
T ss_pred ---c-chh------------hhHHHHHHHHHHHHHc--------CCCEEEECCCchhHHHHHHHHh-------cCCCEEE
Confidence 0 001 1111111222222222 7999999987666655544432 4699999
Q ss_pred EeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCccchhhhccccCCcc
Q 008154 240 VIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYG 319 (576)
Q Consensus 240 t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~ 319 (576)
+.|+.... . .+....++.+|.++++|+...+.+.
T Consensus 107 ~~h~~~~~-----~----------------------------------~~~~~~~~~~~~vi~~s~~~~~~~~------- 140 (355)
T cd03819 107 TVHGFYSV-----N----------------------------------FRYNAIMARGDRVIAVSNFIADHIR------- 140 (355)
T ss_pred EeCCchhh-----H----------------------------------HHHHHHHHhcCEEEEeCHHHHHHHH-------
Confidence 99964210 0 0223445789999999998887763
Q ss_pred hhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHH
Q 008154 320 LHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDL 399 (576)
Q Consensus 320 l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ 399 (576)
..++.+..++.+||||+|...|.+.... ......+++.++.+ ++.++++++||+.+.||++.
T Consensus 141 --~~~~~~~~k~~~i~ngi~~~~~~~~~~~--------------~~~~~~~~~~~~~~--~~~~~i~~~Gr~~~~Kg~~~ 202 (355)
T cd03819 141 --ENYGVDPDRIRVIPRGVDLDRFDPGAVP--------------PERILALAREWPLP--KGKPVILLPGRLTRWKGQEV 202 (355)
T ss_pred --HhcCCChhhEEEecCCccccccCccccc--------------hHHHHHHHHHcCCC--CCceEEEEeeccccccCHHH
Confidence 2345556789999999998877553321 00112256666665 56789999999999999999
Q ss_pred HHHHHHhhhc--CCcEEEEEeCCChh--hHHH-HHHHHHH-hcCceEEEccCChhHHHHHHhcCCEEEeCC-CCCCCcHH
Q 008154 400 IRLAAPEILA--DDIQFVMLGSGDPQ--FESW-MRDTEAT-YKDKYRGWVGFNVPISHRITAGCDILLMPS-RFEPCGLN 472 (576)
Q Consensus 400 ll~a~~~L~~--~~~~lii~G~g~~~--~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps-~~E~~g~s 472 (576)
+++++..+.+ ++++++|+|.++.. ..+. .+.+.+. ...++ .+.++.. .+..+++.||++++|| ..|++|++
T Consensus 203 li~~~~~l~~~~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~~~~v-~~~g~~~-~~~~~l~~ad~~i~ps~~~e~~~~~ 280 (355)
T cd03819 203 FIEALARLKKDDPDVHLLIVGDAQGRRFYYAELLELIKRLGLQDRV-TFVGHCS-DMPAAYALADIVVSASTEPEAFGRT 280 (355)
T ss_pred HHHHHHHHHhcCCCeEEEEEECCcccchHHHHHHHHHHHcCCcceE-EEcCCcc-cHHHHHHhCCEEEecCCCCCCCchH
Confidence 9999999977 68999999998532 1111 2222221 22334 4566643 4568999999999999 78999999
Q ss_pred HHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH---Hh
Q 008154 473 QLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG---ME 549 (576)
Q Consensus 473 ~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a---~~ 549 (576)
++|||++|+|||+++.|+..|.+.+ +.+|++++++|+++++++|..++. .+++.+.++++++ +.
T Consensus 281 l~EA~a~G~PvI~~~~~~~~e~i~~----------~~~g~~~~~~~~~~l~~~i~~~~~---~~~~~~~~~~~~a~~~~~ 347 (355)
T cd03819 281 AVEAQAMGRPVIASDHGGARETVRP----------GETGLLVPPGDAEALAQALDQILS---LLPEGRAKMFAKARMCVE 347 (355)
T ss_pred HHHHHhcCCCEEEcCCCCcHHHHhC----------CCceEEeCCCCHHHHHHHHHHHHh---hCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988 789999999999999999986665 3677888888877 56
Q ss_pred hhCCHHHH
Q 008154 550 KDYTWENA 557 (576)
Q Consensus 550 ~~fs~~~~ 557 (576)
++|||++|
T Consensus 348 ~~f~~~~~ 355 (355)
T cd03819 348 TLFSYDRM 355 (355)
T ss_pred HhhhhccC
Confidence 79999864
No 37
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=5.3e-32 Score=294.50 Aligned_cols=228 Identities=15% Similarity=0.094 Sum_probs=168.4
Q ss_pred cceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHH-HcCC
Q 008154 298 DRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQK-ELGL 376 (576)
Q Consensus 298 d~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~i 376 (576)
+.++++|...++.+. ..++.+..++.+||||||...|.+.... .....+ ...+
T Consensus 460 ~i~Vs~S~~~~~~l~---------~~~g~~~~kI~VI~NGVd~~~f~~~~~~-----------------~~~~~~~~~~~ 513 (694)
T PRK15179 460 VALSSNSQFAAHRYA---------DWLGVDERRIPVVYNGLAPLKSVQDDAC-----------------TAMMAQFDART 513 (694)
T ss_pred eEEEeCcHHHHHHHH---------HHcCCChhHEEEECCCcCHHhcCCCchh-----------------hHHHHhhcccc
Confidence 345555555444432 2345566789999999998777643211 111111 1122
Q ss_pred CCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHH
Q 008154 377 PIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRIT 454 (576)
Q Consensus 377 ~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 454 (576)
+ ++.++|+++||+.+.||++.+++|+..+.+ ++++|+|+|+|+ ..+...+.+.+..-.+.+.+.|+..+ +..+|
T Consensus 514 ~--~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~-~~~~L~~l~~~lgL~~~V~flG~~~d-v~~ll 589 (694)
T PRK15179 514 S--DARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGP-LLESVREFAQRLGMGERILFTGLSRR-VGYWL 589 (694)
T ss_pred C--CCCeEEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCc-chHHHHHHHHHcCCCCcEEEcCCcch-HHHHH
Confidence 3 356799999999999999999999998865 589999999985 23444444443322344456777654 55899
Q ss_pred hcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCC--HHHHHHHHHHHHHH
Q 008154 455 AGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLS--EESMLTALRFAIRT 532 (576)
Q Consensus 455 ~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d--~~~la~~i~~~l~~ 532 (576)
+.+|++|+||.+|+||++++|||+||+|||+|+.||..|++.+ +.+|++++++| +++++++|.+++..
T Consensus 590 ~aaDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~d----------g~~GlLv~~~d~~~~~La~aL~~ll~~ 659 (694)
T PRK15179 590 TQFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQE----------GVTGLTLPADTVTAPDVAEALARIHDM 659 (694)
T ss_pred HhcCEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccC----------CCCEEEeCCCCCChHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999998 89999998776 46899999998875
Q ss_pred hhhCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHH
Q 008154 533 YREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 533 ~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y~ 566 (576)
...+++... .+++.+.++|||++++++|.++|+
T Consensus 660 l~~~~~l~~-~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 660 CAADPGIAR-KAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred hhccHHHHH-HHHHHHHHhCCHHHHHHHHHHHhC
Confidence 544554332 233335679999999999999995
No 38
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=2.2e-31 Score=276.64 Aligned_cols=229 Identities=16% Similarity=0.137 Sum_probs=168.5
Q ss_pred hccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHH--H
Q 008154 296 TADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQK--E 373 (576)
Q Consensus 296 ~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~ 373 (576)
.+| ++++|..+.+.+. ..+..+..++.+||||||++.|.+.... ....++ .
T Consensus 339 ~sd-~v~~s~~v~~~l~---------~~lgip~~KI~VIyNGVD~~rf~p~~~~-----------------~~~~r~~~~ 391 (578)
T PRK15490 339 GVD-FMSNNHCVTRHYA---------DWLKLEAKHFQVVYNGVLPPSTEPSSEV-----------------PHKIWQQFT 391 (578)
T ss_pred cch-hhhccHHHHHHHH---------HHhCCCHHHEEEEeCCcchhhcCccchh-----------------hHHHHHHhh
Confidence 344 5566666555542 2345678899999999998887765321 111222 2
Q ss_pred cCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHH-hcCceEEEccCChhHH
Q 008154 374 LGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEAT-YKDKYRGWVGFNVPIS 450 (576)
Q Consensus 374 ~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 450 (576)
.+++ ++.++|+++||+.+.||+..+++++.++.+ ++++|+|+|+|+ ..++..+.+.+. +..++ .+.|+..+ +
T Consensus 392 ~~l~--~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdirLvIVGdG~-~~eeLk~la~elgL~d~V-~FlG~~~D-v 466 (578)
T PRK15490 392 QKTQ--DADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPATRFVLVGDGD-LRAEAQKRAEQLGILERI-LFVGASRD-V 466 (578)
T ss_pred hccC--CCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCeEEEEEeCch-hHHHHHHHHHHcCCCCcE-EECCChhh-H
Confidence 3344 456799999999999999999999988765 589999999995 234444444432 23344 46666444 5
Q ss_pred HHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHH
Q 008154 451 HRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAI 530 (576)
Q Consensus 451 ~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l 530 (576)
..+|+.+|++|+||.+|+||++++|||++|+|||+|+.||..|.+.+ +.+|++++++|++++++++..+.
T Consensus 467 ~~~LaaADVfVlPS~~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~d----------G~nG~LVp~~D~~aLa~ai~lA~ 536 (578)
T PRK15490 467 GYWLQKMNVFILFSRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIE----------GVSGFILDDAQTVNLDQACRYAE 536 (578)
T ss_pred HHHHHhCCEEEEcccccCccHHHHHHHHhCCCEEEeCCCCcHHHccc----------CCcEEEECCCChhhHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999998 99999999999988888774322
Q ss_pred HHhhhCHHHHHHHHHHH---HhhhCCHHHHHHHHHHHHHH
Q 008154 531 RTYREHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFEW 567 (576)
Q Consensus 531 ~~~~~~~~~~~~~~~~a---~~~~fs~~~~~~~y~~~y~~ 567 (576)
... +.......+++++ +.++|||++|+++|.++|..
T Consensus 537 aL~-~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 537 KLV-NLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 211 1223333454544 56799999999999999964
No 39
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=100.00 E-value=9.4e-32 Score=278.54 Aligned_cols=351 Identities=20% Similarity=0.185 Sum_probs=240.6
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 145 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (576)
|||++++.. + ..||.++++..++++|.++||+|++++.....
T Consensus 1 MkIl~~~~~--~--~~gG~~~~~~~l~~~l~~~G~~v~v~~~~~~~---------------------------------- 42 (365)
T cd03825 1 MKVLHLNTS--D--ISGGAARAAYRLHRALQAAGVDSTMLVQEKKA---------------------------------- 42 (365)
T ss_pred CeEEEEecC--C--CCCcHHHHHHHHHHHHHhcCCceeEEEeecch----------------------------------
Confidence 899999863 3 25999999999999999999999999864210
Q ss_pred eecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhh
Q 008154 146 YREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASK 225 (576)
Q Consensus 146 ~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~ 225 (576)
..+ .+ ...+|||||+|.+...........+
T Consensus 43 --------------~~~----------------------------~~--------~~~~~diih~~~~~~~~~~~~~~~~ 72 (365)
T cd03825 43 --------------LIS----------------------------KI--------EIINADIVHLHWIHGGFLSIEDLSK 72 (365)
T ss_pred --------------hhh----------------------------Ch--------hcccCCEEEEEccccCccCHHHHHH
Confidence 000 00 0117999999986655543333332
Q ss_pred ccCCCCCCCCcEEEEeecCCCCC---CCChhhhhhcCCChhhhcccccccccccccccCCc-CccchhHHHHH-Hhccce
Q 008154 226 YRPHGVYKDARSILVIHNLSHQG---VEPAATYKNLGLPSEWYGALEWVFPTWARTHALDT-GEAVNVLKGAI-VTADRL 300 (576)
Q Consensus 226 ~~~~~~~~~~~~v~t~H~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~-~~ad~v 300 (576)
.. .++|+|+|+|+..... .++.....+.. ......... ....... ...+......+ ..++.+
T Consensus 73 ~~-----~~~~~v~~~hd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (365)
T cd03825 73 LL-----DRKPVVWTLHDMWPFTGGCHYPGGCDRYKT-ECGNCPQLG-------SYPEKDLSRWIWRRKRKAWADLNLTI 139 (365)
T ss_pred HH-----cCCCEEEEcccCcccccccCCccccccccc-cCCCCCCCC-------CCCcccHHHHHHHHHHHHhccCCcEE
Confidence 21 3789999999863211 01000000000 000000000 0000000 00011111122 456788
Q ss_pred eccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCC
Q 008154 301 LTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRP 380 (576)
Q Consensus 301 ~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 380 (576)
+++|+...+.+. +....+..++.++|||+|.+.+.+.. +...++..+++ +
T Consensus 140 v~~s~~~~~~~~---------~~~~~~~~~~~vi~ngi~~~~~~~~~-------------------~~~~~~~~~~~--~ 189 (365)
T cd03825 140 VAPSRWLADCAR---------SSSLFKGIPIEVIPNGIDTTIFRPRD-------------------KREARKRLGLP--A 189 (365)
T ss_pred EehhHHHHHHHH---------hccccCCCceEEeCCCCcccccCCCc-------------------HHHHHHHhCCC--C
Confidence 999988776653 22223457899999999988776544 34556777776 4
Q ss_pred CCCEEEEeccccc--ccCHHHHHHHHHhhhc---CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCC-hhHHHHHH
Q 008154 381 DCPLIGFIGRLDY--QKGIDLIRLAAPEILA---DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFN-VPISHRIT 454 (576)
Q Consensus 381 ~~~~i~~~Gr~~~--~Kg~~~ll~a~~~L~~---~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ll 454 (576)
+..++++.|+... .||++.+++|+..+.+ ++++++++|.+++.... ....++.+....+ .+....++
T Consensus 190 ~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~~~~~-------~~~~~v~~~g~~~~~~~~~~~~ 262 (365)
T cd03825 190 DKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDDIELVVFGASDPEIPP-------DLPFPVHYLGSLNDDESLALIY 262 (365)
T ss_pred CCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCchhhhc-------cCCCceEecCCcCCHHHHHHHH
Confidence 5667777777765 8999999999999976 68999999998642211 2233444333334 55667899
Q ss_pred hcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhh
Q 008154 455 AGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYR 534 (576)
Q Consensus 455 ~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~ 534 (576)
+.||++++||..|++|++++|||++|+|||+++.|+..|.+.+ +.+|+++++.|++++++++.+++.
T Consensus 263 ~~ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~----------~~~g~~~~~~~~~~~~~~l~~l~~--- 329 (365)
T cd03825 263 SAADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDH----------GVTGYLAKPGDPEDLAEGIEWLLA--- 329 (365)
T ss_pred HhCCEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeC----------CCceEEeCCCCHHHHHHHHHHHHh---
Confidence 9999999999999999999999999999999999999999988 789999999999999999999875
Q ss_pred hCHHHHHHHHHHH---HhhhCCHHHHHHHHHHHHHHh
Q 008154 535 EHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFEWA 568 (576)
Q Consensus 535 ~~~~~~~~~~~~a---~~~~fs~~~~~~~y~~~y~~~ 568 (576)
+++.+.++++++ +.++|||++++++|.++|+++
T Consensus 330 -~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~~ 365 (365)
T cd03825 330 -DPDEREELGEAARELAENEFDSRVQAKRYLSLYEEL 365 (365)
T ss_pred -CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 777777777776 456899999999999999863
No 40
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=100.00 E-value=4e-32 Score=281.15 Aligned_cols=348 Identities=15% Similarity=0.129 Sum_probs=231.8
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhC--CCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEE
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR--GHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFF 143 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~--G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (576)
|||++++.. .| ..||+++++.+++++|.++ ||+|.++++...... ....
T Consensus 1 mkI~~~~~~-~~--~~GG~e~~~~~l~~~L~~~~~g~~v~v~~~~~~~~~---~~~~----------------------- 51 (359)
T PRK09922 1 MKIAFIGEA-VS--GFGGMETVISNVINTFEESKINCEMFFFCRNDKMDK---AWLK----------------------- 51 (359)
T ss_pred CeeEEeccc-cc--CCCchhHHHHHHHHHhhhcCcceeEEEEecCCCCCh---HHHH-----------------------
Confidence 899999875 34 2599999999999999999 899999987543210 0000
Q ss_pred EeeecCeEEE-EecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHH
Q 008154 144 HEYREGVDWV-FVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLL 222 (576)
Q Consensus 144 ~~~~~gv~v~-~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l 222 (576)
.+... .+++.... .+. .... .....+.++.. +|||||+|+..+.+....+
T Consensus 52 -----~~~~~~~~~~~~~~----~~~--------~~~~----~~~l~~~l~~~--------~~Dii~~~~~~~~~~~~~~ 102 (359)
T PRK09922 52 -----EIKYAQSFSNIKLS----FLR--------RAKH----VYNFSKWLKET--------QPDIVICIDVISCLYANKA 102 (359)
T ss_pred -----hcchhcccccchhh----hhc--------ccHH----HHHHHHHHHhc--------CCCEEEEcCHHHHHHHHHH
Confidence 00000 00000000 000 0000 11122333322 7999999986655544444
Q ss_pred HhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceec
Q 008154 223 ASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLT 302 (576)
Q Consensus 223 ~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~ 302 (576)
.+..+ ...+++.+.|..... ... .....+..+|.+++
T Consensus 103 ~~~~~-----~~~~~~~~~h~~~~~---------------~~~-----------------------~~~~~~~~~d~~i~ 139 (359)
T PRK09922 103 RKKSG-----KQFKIFSWPHFSLDH---------------KKH-----------------------AECKKITCADYHLA 139 (359)
T ss_pred HHHhC-----CCCeEEEEecCcccc---------------cch-----------------------hhhhhhhcCCEEEE
Confidence 43321 234567677743100 000 00011367999999
Q ss_pred cCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCC
Q 008154 303 VSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDC 382 (576)
Q Consensus 303 vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 382 (576)
+|+.+.+.+.. ...+..++.+||||+|.+.+..... ...+.
T Consensus 140 ~S~~~~~~~~~----------~~~~~~ki~vi~N~id~~~~~~~~~-----------------------------~~~~~ 180 (359)
T PRK09922 140 ISSGIKEQMMA----------RGISAQRISVIYNPVEIKTIIIPPP-----------------------------ERDKP 180 (359)
T ss_pred cCHHHHHHHHH----------cCCCHHHEEEEcCCCCHHHccCCCc-----------------------------ccCCC
Confidence 99998877631 1334568999999999654432111 01246
Q ss_pred CEEEEecccc--cccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHH-hcCceEEEccCC---hhHHHHHHhc
Q 008154 383 PLIGFIGRLD--YQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEAT-YKDKYRGWVGFN---VPISHRITAG 456 (576)
Q Consensus 383 ~~i~~~Gr~~--~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~ll~~ 456 (576)
++++++||+. +.||++.+++|+..+.. +++|+|+|+|+ ..+...+.+.+. +..++ .+.|+. .+....+|+.
T Consensus 181 ~~i~~~Grl~~~~~k~~~~l~~a~~~~~~-~~~l~ivG~g~-~~~~l~~~~~~~~l~~~v-~f~G~~~~~~~~~~~~~~~ 257 (359)
T PRK09922 181 AVFLYVGRLKFEGQKNVKELFDGLSQTTG-EWQLHIIGDGS-DFEKCKAYSRELGIEQRI-IWHGWQSQPWEVVQQKIKN 257 (359)
T ss_pred cEEEEEEEEecccCcCHHHHHHHHHhhCC-CeEEEEEeCCc-cHHHHHHHHHHcCCCCeE-EEecccCCcHHHHHHHHhc
Confidence 8899999996 46999999999998844 79999999995 344444444432 23344 345542 2456678899
Q ss_pred CCEEEeCCCCCCCcHHHHHHHHcCCceEEeC-ccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhh
Q 008154 457 CDILLMPSRFEPCGLNQLYAMRYGTIPVVHA-TGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYRE 535 (576)
Q Consensus 457 ~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~-~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~ 535 (576)
+|++|+||.+|+||++++||||||+|||+++ .||..|++.+ +.+|++++++|+++++++|.+++.
T Consensus 258 ~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~----------~~~G~lv~~~d~~~la~~i~~l~~---- 323 (359)
T PRK09922 258 VSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKP----------GLNGELYTPGNIDEFVGKLNKVIS---- 323 (359)
T ss_pred CcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccC----------CCceEEECCCCHHHHHHHHHHHHh----
Confidence 9999999999999999999999999999999 8999999988 899999999999999999999986
Q ss_pred CHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhh
Q 008154 536 HKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASI 570 (576)
Q Consensus 536 ~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y~~~~~ 570 (576)
|++.+..........+|+-+.+.+++.++|+.+..
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
T PRK09922 324 GEVKYQHDAIPNSIERFYEVLYFKNLNNALFSKLQ 358 (359)
T ss_pred CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 44432222222235689999999999999988764
No 41
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=100.00 E-value=2.2e-31 Score=275.24 Aligned_cols=354 Identities=17% Similarity=0.197 Sum_probs=241.3
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++... ..||.++++..++++|.+.||+|++++..-..... ...
T Consensus 1 ~il~~~~~~----~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~---~~~-------------------------- 47 (360)
T cd04951 1 KILYVITGL----GLGGAEKQVVDLADQFVAKGHQVAIISLTGESEVK---PPI-------------------------- 47 (360)
T ss_pred CeEEEecCC----CCCCHHHHHHHHHHhcccCCceEEEEEEeCCCCcc---chh--------------------------
Confidence 478887542 36999999999999999999999999864211100 000
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhc
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 226 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~ 226 (576)
.......+. .... ...+......+.+.++.. +|||||+|..++.+...+++...
T Consensus 48 -~~~~~~~~~---~~~~--------------~~~~~~~~~~~~~~~~~~--------~pdiv~~~~~~~~~~~~l~~~~~ 101 (360)
T cd04951 48 -DATIILNLN---MSKN--------------PLSFLLALWKLRKILRQF--------KPDVVHAHMFHANIFARLLRLFL 101 (360)
T ss_pred -hccceEEec---cccc--------------chhhHHHHHHHHHHHHhc--------CCCEEEEcccchHHHHHHHHhhC
Confidence 000011111 0000 001111111222332222 79999999887766655555432
Q ss_pred cCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCcc
Q 008154 227 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 306 (576)
Q Consensus 227 ~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~ 306 (576)
.+++++.|.|+....+ ... ..+.+.+...++.++++|+.
T Consensus 102 ------~~~~~v~~~h~~~~~~--------------~~~---------------------~~~~~~~~~~~~~~~~~s~~ 140 (360)
T cd04951 102 ------PSPPLICTAHSKNEGG--------------RLR---------------------MLAYRLTDFLSDLTTNVSKE 140 (360)
T ss_pred ------CCCcEEEEeeccCchh--------------HHH---------------------HHHHHHHhhccCceEEEcHH
Confidence 5689999999752110 000 01223334567888888887
Q ss_pred chhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEE
Q 008154 307 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 386 (576)
Q Consensus 307 ~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~ 386 (576)
..+.+.. ....+..++.+||||+|...+.+.... ...+++.++++ ++.++++
T Consensus 141 ~~~~~~~---------~~~~~~~~~~~i~ng~~~~~~~~~~~~-----------------~~~~~~~~~~~--~~~~~~l 192 (360)
T cd04951 141 ALDYFIA---------SKAFNANKSFVVYNGIDTDRFRKDPAR-----------------RLKIRNALGVK--NDTFVIL 192 (360)
T ss_pred HHHHHHh---------ccCCCcccEEEEccccchhhcCcchHH-----------------HHHHHHHcCcC--CCCEEEE
Confidence 6665431 112345689999999998777654322 34566777776 5678999
Q ss_pred EecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHH-hcCceEEEccCChhHHHHHHhcCCEEEeC
Q 008154 387 FIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEAT-YKDKYRGWVGFNVPISHRITAGCDILLMP 463 (576)
Q Consensus 387 ~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~Dv~v~p 463 (576)
++||+.+.||++.+++++.++.+ ++++|+|+|+|+. .+...+.+.+. ...++. +.++..+ +..+++.||++++|
T Consensus 193 ~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~~-~~~~~~~~~~~~~~~~v~-~~g~~~~-~~~~~~~ad~~v~~ 269 (360)
T cd04951 193 AVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGPL-RATLERLIKALGLSNRVK-LLGLRDD-IAAYYNAADLFVLS 269 (360)
T ss_pred EEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCCc-HHHHHHHHHhcCCCCcEE-Eeccccc-HHHHHHhhceEEec
Confidence 99999999999999999999876 4899999999862 34444444332 223444 4454433 45799999999999
Q ss_pred CCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHH
Q 008154 464 SRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGL 543 (576)
Q Consensus 464 s~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~ 543 (576)
|.+|++|++++|||++|+|+|+++.|+..|.+.+ +|+.++++|+++++++|.+++. .++.....+
T Consensus 270 s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~------------~g~~~~~~~~~~~~~~i~~ll~---~~~~~~~~~ 334 (360)
T cd04951 270 SAWEGFGLVVAEAMACELPVVATDAGGVREVVGD------------SGLIVPISDPEALANKIDEILK---MSGEERDII 334 (360)
T ss_pred ccccCCChHHHHHHHcCCCEEEecCCChhhEecC------------CceEeCCCCHHHHHHHHHHHHh---CCHHHHHHH
Confidence 9999999999999999999999999999999864 7889999999999999999985 244444444
Q ss_pred HHH--HHhhhCCHHHHHHHHHHHHH
Q 008154 544 MRR--GMEKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 544 ~~~--a~~~~fs~~~~~~~y~~~y~ 566 (576)
.++ .+.++|||+.++++|.++|.
T Consensus 335 ~~~~~~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 335 GARRERIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHhh
Confidence 433 35689999999999999996
No 42
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=100.00 E-value=1.2e-31 Score=277.37 Aligned_cols=342 Identities=17% Similarity=0.118 Sum_probs=230.4
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++..+ + .||.++++.+++++|.+.||+|+++++...... .... ..
T Consensus 1 kIl~~~~~~-~---~GG~~~~~~~l~~~L~~~~~~v~~i~~~~~~~~-----~~~~----------------------~~ 49 (358)
T cd03812 1 KILHIVGTM-N---RGGIETFIMNYYRNLDRSKIQFDFLVTSKEEGD-----YDDE----------------------IE 49 (358)
T ss_pred CEEEEeCCC-C---CccHHHHHHHHHHhcCccceEEEEEEeCCCCcc-----hHHH----------------------HH
Confidence 589998764 3 699999999999999999999999997643210 0000 00
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhc
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 226 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~ 226 (576)
..+++++.++... .....+ .....+.++.. +|||||+|.........++....
T Consensus 50 ~~~~~~~~~~~~~----------------~~~~~~---~~~~~~~~~~~--------~~Dvv~~~~~~~~~~~~~~~~~~ 102 (358)
T cd03812 50 KLGGKIYYIPARK----------------KNPLKY---FKKLYKLIKKN--------KYDIVHVHGSSASGFILLAAKKA 102 (358)
T ss_pred HcCCeEEEecCCC----------------ccHHHH---HHHHHHHHhcC--------CCCEEEEeCcchhHHHHHHHhhC
Confidence 1244554432111 001111 11122222222 79999999876555555544432
Q ss_pred cCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCcc
Q 008154 227 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 306 (576)
Q Consensus 227 ~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~ 306 (576)
....++++.|+.......... ... ...+.+..++.++.++++|+.
T Consensus 103 ------~~~~~v~~~~~~~~~~~~~~~---------~~~--------------------~~~~~~~~~~~~~~~i~~s~~ 147 (358)
T cd03812 103 ------GVKVRIAHSHNTSDSHDKKKK---------ILK--------------------YKVLRKLINRLATDYLACSEE 147 (358)
T ss_pred ------CCCeEEEEeccccccccccch---------hhH--------------------HHHHHHHHHhcCCEEEEcCHH
Confidence 223457788865322111000 000 012456677889999999998
Q ss_pred chhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEE
Q 008154 307 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 386 (576)
Q Consensus 307 ~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~ 386 (576)
..+.+.. . ....++.+||||+|.+.+.+.... +.. ++..+.. ++.++|+
T Consensus 148 ~~~~~~~---------~--~~~~~~~vi~ngvd~~~~~~~~~~-----------------~~~-~~~~~~~--~~~~~i~ 196 (358)
T cd03812 148 AGKWLFG---------K--VKNKKFKVIPNGIDLEKFIFNEEI-----------------RKK-RRELGIL--EDKFVIG 196 (358)
T ss_pred HHHHHHh---------C--CCcccEEEEeccCcHHHcCCCchh-----------------hhH-HHHcCCC--CCCEEEE
Confidence 7766531 1 345789999999998877654321 111 3444444 5778999
Q ss_pred EecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHH-hcCceEEEccCChhHHHHHHhcCCEEEeC
Q 008154 387 FIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEAT-YKDKYRGWVGFNVPISHRITAGCDILLMP 463 (576)
Q Consensus 387 ~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~Dv~v~p 463 (576)
|+||+.+.||++.+++|+..|.+ ++++++|+|+|+. .+...+.+.+. ...++ .+.++. +.+..+++.||++|+|
T Consensus 197 ~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~-~~~~~~~~~~~~~~~~v-~~~g~~-~~~~~~~~~adi~v~p 273 (358)
T cd03812 197 HVGRFSEQKNHEFLIEIFAELLKKNPNAKLLLVGDGEL-EEEIKKKVKELGLEDKV-IFLGVR-NDVPELLQAMDVFLFP 273 (358)
T ss_pred EEeccccccChHHHHHHHHHHHHhCCCeEEEEEeCCch-HHHHHHHHHhcCCCCcE-EEeccc-CCHHHHHHhcCEEEec
Confidence 99999999999999999999976 5899999999863 33333333332 23344 455553 3456899999999999
Q ss_pred CCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHH
Q 008154 464 SRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGL 543 (576)
Q Consensus 464 s~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~ 543 (576)
|.+|++|++++||||+|+|||+|+.|+..|.+.+ ..|++..++++++++++|.+++. |++..+++
T Consensus 274 s~~E~~~~~~lEAma~G~PvI~s~~~~~~~~i~~-----------~~~~~~~~~~~~~~a~~i~~l~~----~~~~~~~~ 338 (358)
T cd03812 274 SLYEGLPLVLIEAQASGLPCILSDTITKEVDLTD-----------LVKFLSLDESPEIWAEEILKLKS----EDRRERSS 338 (358)
T ss_pred ccccCCCHHHHHHHHhCCCEEEEcCCchhhhhcc-----------CccEEeCCCCHHHHHHHHHHHHh----Ccchhhhh
Confidence 9999999999999999999999999999999876 45666667788999999999986 77777777
Q ss_pred HHHHHhh
Q 008154 544 MRRGMEK 550 (576)
Q Consensus 544 ~~~a~~~ 550 (576)
...+..+
T Consensus 339 ~~~~~~~ 345 (358)
T cd03812 339 ESIKKKG 345 (358)
T ss_pred hhhhhcc
Confidence 6665443
No 43
>PLN02949 transferase, transferring glycosyl groups
Probab=100.00 E-value=1.6e-31 Score=281.69 Aligned_cols=233 Identities=14% Similarity=0.079 Sum_probs=175.0
Q ss_pred hHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHH
Q 008154 289 VLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKI 368 (576)
Q Consensus 289 ~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 368 (576)
++..+.+.||.++++|+++++.+.+ .+.. ..++.+++||+|.+.+......
T Consensus 213 l~~~~~~~ad~ii~nS~~t~~~l~~---------~~~~-~~~i~vvyp~vd~~~~~~~~~~------------------- 263 (463)
T PLN02949 213 MYGLVGRCAHLAMVNSSWTKSHIEA---------LWRI-PERIKRVYPPCDTSGLQALPLE------------------- 263 (463)
T ss_pred HHHHHcCCCCEEEECCHHHHHHHHH---------HcCC-CCCeEEEcCCCCHHHcccCCcc-------------------
Confidence 3455668999999999999887642 2222 3478899999997655221110
Q ss_pred HHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc------CCcEEEEEeCCCh-hh----HHHHHHHHH-Hhc
Q 008154 369 ALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA------DDIQFVMLGSGDP-QF----ESWMRDTEA-TYK 436 (576)
Q Consensus 369 ~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~------~~~~lii~G~g~~-~~----~~~~~~~~~-~~~ 436 (576)
..++..+++++||+.++||++++|+|+.++.+ ++++|+|+|++.. .. ++..+.+++ .+.
T Consensus 264 ---------~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~ 334 (463)
T PLN02949 264 ---------RSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLD 334 (463)
T ss_pred ---------ccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCC
Confidence 01245789999999999999999999998753 4799999999731 11 223333332 234
Q ss_pred CceEEEccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccc-cccccccccccCCCCCcceeEeC
Q 008154 437 DKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLR-DTVENFNPFAREGSGEGTGWSFL 515 (576)
Q Consensus 437 ~~~~~~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~-e~i~~~~~~~~~~~~~~~G~~~~ 515 (576)
.++.+....+.+....+|+.||++++||.+|+||++++||||+|+|||+++.||.. |++.+ ..++.+|++++
T Consensus 335 ~~V~f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~-------~~~g~tG~l~~ 407 (463)
T PLN02949 335 GDVEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLD-------EDGQQTGFLAT 407 (463)
T ss_pred CcEEEeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeec-------CCCCcccccCC
Confidence 56666555566777789999999999999999999999999999999999999875 66654 11256899874
Q ss_pred CCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHhhhC
Q 008154 516 PLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWASID 571 (576)
Q Consensus 516 ~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~~~~~ 571 (576)
|+++++++|.+++. ++++.+.+|++++ ..++|||+++++++.+.++.+++.
T Consensus 408 --~~~~la~ai~~ll~---~~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~~~ 460 (463)
T PLN02949 408 --TVEEYADAILEVLR---MRETERLEIAAAARKRANRFSEQRFNEDFKDAIRPILNS 460 (463)
T ss_pred --CHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhh
Confidence 89999999999986 2566677777776 346899999999999999988764
No 44
>PRK14986 glycogen phosphorylase; Provisional
Probab=100.00 E-value=9.2e-33 Score=296.33 Aligned_cols=421 Identities=15% Similarity=0.088 Sum_probs=278.9
Q ss_pred cccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccC------------------ceeEEEeecC-----
Q 008154 79 SKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDL------------------GCCMKICCFG----- 135 (576)
Q Consensus 79 ~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~----- 135 (576)
..+||+|+++.++.++++++|.+.+.+|..|..|.+.|.. .+.++. ...+.|.+.|
T Consensus 121 LGnGGLGrLAac~ldS~A~LglP~~G~Gi~Y~yG~F~Q~I-~dG~Q~E~pd~w~~~~~pwe~~r~~~~~~V~f~g~~~~~ 199 (815)
T PRK14986 121 LGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNI-VNGRQKESPDYWLEYGNPWEFKRHNTRYKVRFGGRIQQE 199 (815)
T ss_pred CCCcchHHHHHHHHHHHHhCCCCeEEEEecccCCCeEEEE-ECCEEEEcCCCccCCCCceeEecCCcEEEEEeCCEEEec
Confidence 4589999999999999999999999999999999765444 222221 1112222222
Q ss_pred ---------------------------CeeEEEEEEeeec-----------CeEEEEecCCC-CCCCCCCCCCCCCCCCc
Q 008154 136 ---------------------------GEQEIAFFHEYRE-----------GVDWVFVDHPS-YHRPGNPYGDINGAFGD 176 (576)
Q Consensus 136 ---------------------------~~~~~~~~~~~~~-----------gv~v~~l~~~~-~~~~~~~y~~~~~~~~~ 176 (576)
....+|+|...++ ++..+..+... -.-+..+|+.. ..|.+
T Consensus 200 g~~~~w~~~~~v~avpyD~pipgy~t~~vn~lRLW~a~~~~~fd~~~fn~g~y~~a~~~~n~~e~Is~~LYp~D-~~y~G 278 (815)
T PRK14986 200 GKKTRWIETEEILAVAYDQIIPGYDTDATNTLRLWSAQASSEINLGKFNQGDYFAAVEDKNHSENVSRVLYPDD-STYSG 278 (815)
T ss_pred CceeEeeCCeeEEEEeCCccccCCCCCceEEEEEEEeecCcccCHhhcccccHHHHhhccchhhccccccCCCC-CCccc
Confidence 2233344444432 11111112110 01123345431 22335
Q ss_pred hHHHH---HHHHHHHHhhc-ccC-----CCCCCCCCCccEEEeCCCccchHHHHHHhhcc-----CCCCC---CCCcEEE
Q 008154 177 NQFRY---TLLCYAACEAP-LVL-----PLGGFTYGEKCIFLVNDWHAGLVPVLLASKYR-----PHGVY---KDARSIL 239 (576)
Q Consensus 177 ~~~r~---~~~~~~~~~~~-~~~-----~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~~-----~~~~~---~~~~~v~ 239 (576)
.+.|+ .+++.++++.+ +.. .+..+. ++.+||+||.|++++...+-+... .+..+ .+..++|
T Consensus 279 k~lRLkQEyfl~~agv~di~r~~~~~~~~l~~l~--~~v~ihlNDtHpa~~i~ElmR~L~d~~gl~~~eA~~iv~~~~~f 356 (815)
T PRK14986 279 RELRLRQEYFLVSATVQDILSRHYQLHKTYDNLA--DKIAIHLNDTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSY 356 (815)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHhCCCHhhCC--cccEEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhEEe
Confidence 68888 67787777744 100 011111 567999999999987443332111 11111 1237899
Q ss_pred EeecCCCCC--CCChhhhhhcC-CCh--------hhhccccccc----ccccccccCCc--CccchhHHHHHHhccceec
Q 008154 240 VIHNLSHQG--VEPAATYKNLG-LPS--------EWYGALEWVF----PTWARTHALDT--GEAVNVLKGAIVTADRLLT 302 (576)
Q Consensus 240 t~H~~~~~~--~~~~~~~~~~~-~~~--------~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~a~~~ad~v~~ 302 (576)
|+||+.+.+ .||.+++..+- -.. +++......+ ..++++--... ...++|..+|+..|..+++
T Consensus 357 TnHT~lpealE~w~~~l~~~~lpr~l~Ii~eIn~~fl~~~~~~~~~~~~~~~~~sii~~~~~~~v~Ma~LAl~~S~~vNG 436 (815)
T PRK14986 357 TNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYFLKTLQEQYPNDTDLLGRASIIDESNGRRVRMAWLAVVVSHKVNG 436 (815)
T ss_pred ecccCChHHhCcCCHHHHHHHccHhhhHHHHHHHHHHHHHHHhCCCcHHHHhhhhccccCCCCEEeeHHHHhhccchhhH
Confidence 999997666 78888885442 111 1111100000 01122111111 2369999999999999999
Q ss_pred cCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCC---CCCccccccCCcCCcccchHhHH-----------
Q 008154 303 VSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNP---SSDEHIASHYSIDDLSGKVQCKI----------- 368 (576)
Q Consensus 303 vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~----------- 368 (576)
||+.+.+.+++.++ ......-+.++.-++|||+...|.. +...++++++.+++|..+.....
T Consensus 437 VS~lH~evl~~~~f----~df~~l~P~kf~niTNGV~~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~d~~f 512 (815)
T PRK14986 437 VSELHSNLMVQSLF----ADFAKIFPGRFCNVTNGVTPRRWLALANPSLSAVLDEHIGRTWRTDLSQLSELKQHCDYPMV 512 (815)
T ss_pred HHHHHHHHHHHHHH----HHHHhhCCCcccccCCCCChhhHhhhcCHHHHHHHHHhcCchhhhChHHHHHHHhhccCHHH
Confidence 99998876544332 2223345666778999999999984 66778888888888864432222
Q ss_pred -----------------HHHHHcCCCCCCCCCEEEEecccccccCHHH-HHHHHHhhhc---------CCcEEEEEeCCC
Q 008154 369 -----------------ALQKELGLPIRPDCPLIGFIGRLDYQKGIDL-IRLAAPEILA---------DDIQFVMLGSGD 421 (576)
Q Consensus 369 -----------------~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~-ll~a~~~L~~---------~~~~lii~G~g~ 421 (576)
.+++..|+..+++.++++++.||..||+..+ ++..+.++.+ .|+++||+|+++
T Consensus 513 ~~~l~~vk~~nK~~L~~~i~~~~g~~ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAa 592 (815)
T PRK14986 513 NHAVRQAKLENKKRLAEYIAQQLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAA 592 (815)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCccCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCC
Confidence 3333557666799999999999999999999 8887666533 278999999998
Q ss_pred hhhHHHHHHHHH------------HhcC--ceEEEccCChhHHHHHHhcCCEEEeCCC--CCCCcHHHHHHHHcCCceEE
Q 008154 422 PQFESWMRDTEA------------TYKD--KYRGWVGFNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYGTIPVV 485 (576)
Q Consensus 422 ~~~~~~~~~~~~------------~~~~--~~~~~~~~~~~~~~~ll~~~Dv~v~ps~--~E~~g~s~lEAma~G~pvIa 485 (576)
|.+...++.++. ..++ +++++++|+..++..++++|||+.+.|+ .|++|++.|++|.+|.++++
T Consensus 593 P~y~~aK~iIk~I~~va~~in~Dp~v~~~lkVVFlenY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlg 672 (815)
T PRK14986 593 SAYYMAKHIIHLINDVAKVINNDPQIGDKLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIG 672 (815)
T ss_pred CCcHHHHHHHHHHHHHHHHhccChhhcCceeEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeee
Confidence 877666655543 2223 7999999999999999999999999998 79999999999999999999
Q ss_pred eCccccccccccccccccCCCCCcceeEeC
Q 008154 486 HATGGLRDTVENFNPFAREGSGEGTGWSFL 515 (576)
Q Consensus 486 t~~gg~~e~i~~~~~~~~~~~~~~~G~~~~ 515 (576)
|.+|||.|+..+. +++|||.|.
T Consensus 673 tlDG~nvEi~e~v--------G~eN~~~fG 694 (815)
T PRK14986 673 TLDGANVEMLEHV--------GEENIFIFG 694 (815)
T ss_pred ccCCchhHHHHhc--------CCCcEEEeC
Confidence 9999999999742 247899884
No 45
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=100.00 E-value=1.2e-31 Score=278.42 Aligned_cols=273 Identities=18% Similarity=0.180 Sum_probs=203.3
Q ss_pred CccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCc
Q 008154 204 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDT 283 (576)
Q Consensus 204 ~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (576)
+|||||+|....+.....+.++ .++|+|+|.|+........ .......
T Consensus 82 ~~dvvh~~~~~~~~~~~~~~~~-------~~~p~i~~~h~~~~~~~~~------~~~~~~~------------------- 129 (367)
T cd05844 82 RPDLVHAHFGFDGVYALPLARR-------LGVPLVVTFHGFDATTSLA------LLLRSRW------------------- 129 (367)
T ss_pred CCCEEEeccCchHHHHHHHHHH-------cCCCEEEEEeCccccccch------hhcccch-------------------
Confidence 7999999976555544444432 5799999999642111000 0000000
Q ss_pred CccchhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccc
Q 008154 284 GEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGK 363 (576)
Q Consensus 284 ~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~ 363 (576)
.....+++..++.+|.++++|+..++.+.. .+.+..++.+++||+|.+.+.+....
T Consensus 130 ~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~----------~~~~~~~i~vi~~g~d~~~~~~~~~~-------------- 185 (367)
T cd05844 130 ALYARRRRRLARRAALFIAVSQFIRDRLLA----------LGFPPEKVHVHPIGVDTAKFTPATPA-------------- 185 (367)
T ss_pred hHHHHHHHHHHHhcCEEEECCHHHHHHHHH----------cCCCHHHeEEecCCCCHHhcCCCCCC--------------
Confidence 001235566778999999999988877642 13345679999999998776543211
Q ss_pred hHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHH-hcCceE
Q 008154 364 VQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEAT-YKDKYR 440 (576)
Q Consensus 364 ~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~-~~~~~~ 440 (576)
.+..+++++|++.+.||++.+++|+..+.+ ++++|+|+|+++ ..++..+.+.+. ...++.
T Consensus 186 ----------------~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~-~~~~~~~~~~~~~~~~~v~ 248 (367)
T cd05844 186 ----------------RRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGP-LLAALEALARALGLGGRVT 248 (367)
T ss_pred ----------------CCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCch-HHHHHHHHHHHcCCCCeEE
Confidence 356789999999999999999999999875 589999999985 233333333331 344554
Q ss_pred EEccCChhHHHHHHhcCCEEEeCCC------CCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEe
Q 008154 441 GWVGFNVPISHRITAGCDILLMPSR------FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSF 514 (576)
Q Consensus 441 ~~~~~~~~~~~~ll~~~Dv~v~ps~------~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~ 514 (576)
+....+.+.+..+++.+|++++||. .|++|++++|||+||+|||+++.++..|.+.+ +.+|+++
T Consensus 249 ~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~----------~~~g~~~ 318 (367)
T cd05844 249 FLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVED----------GETGLLV 318 (367)
T ss_pred ECCCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheec----------CCeeEEE
Confidence 4333455667789999999999997 49999999999999999999999999999988 8899999
Q ss_pred CCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH---HhhhCCHHHHHHHHHH
Q 008154 515 LPLSEESMLTALRFAIRTYREHKSSWEGLMRRG---MEKDYTWENAAIQYEQ 563 (576)
Q Consensus 515 ~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a---~~~~fs~~~~~~~y~~ 563 (576)
+++|+++++++|.+++. |++.+.++++++ +.++|||+.+++++.+
T Consensus 319 ~~~d~~~l~~~i~~l~~----~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 319 PEGDVAALAAALGRLLA----DPDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred CCCCHHHHHHHHHHHHc----CHHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 99999999999999875 788888888776 4578999999999875
No 46
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=9.6e-31 Score=270.10 Aligned_cols=360 Identities=21% Similarity=0.218 Sum_probs=244.8
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++..++|. .||.+..+..++++|++.||+|.++++....... ...
T Consensus 1 kIl~i~~~~~p~--~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~---~~~-------------------------- 49 (364)
T cd03814 1 RIAIVTDTFLPQ--VNGVVRTLQRLVEHLRARGHEVLVIAPGPFRESE---GPA-------------------------- 49 (364)
T ss_pred CeEEEecccCcc--ccceehHHHHHHHHHHHCCCEEEEEeCCchhhcc---CCC--------------------------
Confidence 699999998883 5999999999999999999999999876422100 000
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccc-hHHHHHHhh
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAG-LVPVLLASK 225 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~-~~~~~l~~~ 225 (576)
..+.+.....+.+... ...- ... ....+.++. .+||+||+|..... +....+..
T Consensus 50 -~~~~~~~~~~~~~~~~-~~~~-------~~~-------~~~~~~~~~--------~~pdii~~~~~~~~~~~~~~~~~- 104 (364)
T cd03814 50 -RVVPVPSVPLPGYPEI-RLAL-------PPR-------RRVRRLLDA--------FAPDVVHIATPGPLGLAALRAAR- 104 (364)
T ss_pred -CceeecccccCcccce-Eecc-------cch-------hhHHHHHHh--------cCCCEEEEeccchhhHHHHHHHH-
Confidence 0011111110000000 0000 000 011111111 17999999864332 22223222
Q ss_pred ccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCc
Q 008154 226 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 305 (576)
Q Consensus 226 ~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~ 305 (576)
. .++|++.+.|+.. +.............. ...+.+..++.+|.++++|+
T Consensus 105 ~------~~~~~i~~~~~~~-----~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~d~i~~~s~ 153 (364)
T cd03814 105 R------LGIPVVTSYHTDF-----PEYLRYYGLGPLSWL--------------------AWAYLRWFHNRADRVLVPSP 153 (364)
T ss_pred H------cCCCEEEEEecCh-----HHHhhhcccchHhHh--------------------hHHHHHHHHHhCCEEEeCCH
Confidence 2 5789999999752 111000000000000 01355667789999999999
Q ss_pred cchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEE
Q 008154 306 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 385 (576)
Q Consensus 306 ~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i 385 (576)
...+... .....++.+++||+|...+.+.... ...++..+ + .+.+++
T Consensus 154 ~~~~~~~------------~~~~~~~~~~~~g~~~~~~~~~~~~------------------~~~~~~~~-~--~~~~~i 200 (364)
T cd03814 154 SLADELR------------ARGFRRVRLWPRGVDTELFHPRRRD------------------EALRARLG-P--PDRPVL 200 (364)
T ss_pred HHHHHHh------------ccCCCceeecCCCccccccCccccc------------------HHHHHHhC-C--CCCeEE
Confidence 8776432 2234578999999998877654321 22233333 2 356899
Q ss_pred EEecccccccCHHHHHHHHHhhhc-CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEeCC
Q 008154 386 GFIGRLDYQKGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPS 464 (576)
Q Consensus 386 ~~~Gr~~~~Kg~~~ll~a~~~L~~-~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps 464 (576)
+|+||+.+.||++.+++++..+.+ ++++++|+|.++. ....+ ....++.+....+.+.+..+++.||++++||
T Consensus 201 ~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i~G~~~~--~~~~~----~~~~~v~~~g~~~~~~~~~~~~~~d~~l~~s 274 (364)
T cd03814 201 LYVGRLAPEKNLEALLDADLPLRRRPPVRLVIVGDGPA--RARLE----ARYPNVHFLGFLDGEELAAAYASADVFVFPS 274 (364)
T ss_pred EEEeccccccCHHHHHHHHHHhhhcCCceEEEEeCCch--HHHHh----ccCCcEEEEeccCHHHHHHHHHhCCEEEECc
Confidence 999999999999999999999976 4899999999852 22222 2233444333335566778999999999999
Q ss_pred CCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHH
Q 008154 465 RFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLM 544 (576)
Q Consensus 465 ~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~ 544 (576)
..|++|++++|||+||+|||+++.++..|.+.+ +.+|+++++.|.++++++|.+++. |++.+.+++
T Consensus 275 ~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~----------~~~g~~~~~~~~~~l~~~i~~l~~----~~~~~~~~~ 340 (364)
T cd03814 275 RTETFGLVVLEAMASGLPVVAPDAGGPADIVTD----------GENGLLVEPGDAEAFAAALAALLA----DPELRRRMA 340 (364)
T ss_pred ccccCCcHHHHHHHcCCCEEEcCCCCchhhhcC----------CcceEEcCCCCHHHHHHHHHHHHc----CHHHHHHHH
Confidence 999999999999999999999999999999987 789999999999999999998875 888888888
Q ss_pred HHHH--hhhCCHHHHHHHHHHHHH
Q 008154 545 RRGM--EKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 545 ~~a~--~~~fs~~~~~~~y~~~y~ 566 (576)
+++. .++|+|+++++++.++|+
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~ 364 (364)
T cd03814 341 ARARAEAERRSWEAFLDNLLEAYR 364 (364)
T ss_pred HHHHHHHhhcCHHHHHHHHHHhhC
Confidence 8873 368999999999999873
No 47
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=100.00 E-value=8.6e-31 Score=269.72 Aligned_cols=358 Identities=18% Similarity=0.167 Sum_probs=250.3
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++..+. .||.++++..++++|.+.|++|.+++...... +...+ .
T Consensus 1 ~i~~i~~~~~----~gG~~~~~~~l~~~l~~~~~~v~~~~~~~~~~------~~~~~----------------------~ 48 (365)
T cd03807 1 KVLHVITGLD----VGGAERMLVRLLKGLDRDRFEHVVISLTDRGE------LGEEL----------------------E 48 (365)
T ss_pred CeEEEEeecc----CccHHHHHHHHHHHhhhccceEEEEecCcchh------hhHHH----------------------H
Confidence 5889987653 39999999999999999999999998642211 00000 0
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhc
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 226 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~ 226 (576)
..+++++.+..+... .... ......+.++.. +||+||+|..+..+.........
T Consensus 49 ~~~i~v~~~~~~~~~--------------~~~~----~~~~~~~~~~~~--------~~div~~~~~~~~~~~~~~~~~~ 102 (365)
T cd03807 49 EAGVPVYCLGKRPGR--------------PDPG----ALLRLYKLIRRL--------RPDVVHTWMYHADLYGGLAARLA 102 (365)
T ss_pred hcCCeEEEEeccccc--------------ccHH----HHHHHHHHHHhh--------CCCEEEeccccccHHHHHHHHhc
Confidence 135666555422210 0011 111122222222 79999999877666555544432
Q ss_pred cCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCcc
Q 008154 227 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 306 (576)
Q Consensus 227 ~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~ 306 (576)
.+++++++.|....... +..... ...+.+...+.+|.++++|+.
T Consensus 103 ------~~~~~i~~~~~~~~~~~---------~~~~~~---------------------~~~~~~~~~~~~~~~i~~s~~ 146 (365)
T cd03807 103 ------GVPPVIWGIRHSDLDLG---------KKSTRL---------------------VARLRRLLSSFIPLIVANSAA 146 (365)
T ss_pred ------CCCcEEEEecCCccccc---------chhHhH---------------------HHHHHHHhccccCeEEeccHH
Confidence 36899999997532110 000000 012344555778999999998
Q ss_pred chhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEE
Q 008154 307 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 386 (576)
Q Consensus 307 ~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~ 386 (576)
..+.+.. ......++.+++||+|...+.+.... ....++.++++ ++.++++
T Consensus 147 ~~~~~~~----------~~~~~~~~~vi~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~--~~~~~i~ 197 (365)
T cd03807 147 AAEYHQA----------IGYPPKKIVVIPNGVDTERFSPDLDA-----------------RARLREELGLP--EDTFLIG 197 (365)
T ss_pred HHHHHHH----------cCCChhheeEeCCCcCHHhcCCcccc-----------------hHHHHHhcCCC--CCCeEEE
Confidence 7766531 13345688999999998777654432 34455677876 5678999
Q ss_pred EecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHH-H-HhcCceEEEccCChhHHHHHHhcCCEEEe
Q 008154 387 FIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTE-A-TYKDKYRGWVGFNVPISHRITAGCDILLM 462 (576)
Q Consensus 387 ~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ 462 (576)
++||+.+.||++.+++|+..+.+ ++++++++|.++.. ....+... . ....++. +.+...+ +..+++.||++++
T Consensus 198 ~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~-~~~~~~~~~~~~~~~~v~-~~g~~~~-~~~~~~~adi~v~ 274 (365)
T cd03807 198 IVARLHPQKDHATLLRAAALLLKKFPNARLLLVGDGPDR-ANLELLALKELGLEDKVI-LLGERSD-VPALLNALDVFVL 274 (365)
T ss_pred EecccchhcCHHHHHHHHHHHHHhCCCeEEEEecCCcch-hHHHHHHHHhcCCCceEE-Ecccccc-HHHHHHhCCEEEe
Confidence 99999999999999999999876 58999999998532 22222222 1 2223343 4444333 5589999999999
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHH
Q 008154 463 PSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEG 542 (576)
Q Consensus 463 ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~ 542 (576)
||.+|++|++++|||+||+|||+++.|+..|.+.+ +|++++++|+++++++|.+++. +++.+.+
T Consensus 275 ps~~e~~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~------------~g~~~~~~~~~~l~~~i~~l~~----~~~~~~~ 338 (365)
T cd03807 275 SSLSEGFPNVLLEAMACGLPVVATDVGDNAELVGD------------TGFLVPPGDPEALAEAIEALLA----DPALRQA 338 (365)
T ss_pred CCccccCCcHHHHHHhcCCCEEEcCCCChHHHhhc------------CCEEeCCCCHHHHHHHHHHHHh----ChHHHHH
Confidence 99999999999999999999999999999998863 8999999999999999999886 6777777
Q ss_pred HHHHH---HhhhCCHHHHHHHHHHHHH
Q 008154 543 LMRRG---MEKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 543 ~~~~a---~~~~fs~~~~~~~y~~~y~ 566 (576)
+++++ +.++|||++++++|.++|+
T Consensus 339 ~~~~~~~~~~~~~s~~~~~~~~~~~y~ 365 (365)
T cd03807 339 LGEAARERIEENFSIEAMVEAYEELYR 365 (365)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 77776 4578999999999999884
No 48
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=100.00 E-value=3.2e-32 Score=290.93 Aligned_cols=423 Identities=15% Similarity=0.072 Sum_probs=280.1
Q ss_pred cccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccch-------hccccC----------ceeEEEeecCCe----
Q 008154 79 SKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENF-------TLAKDL----------GCCMKICCFGGE---- 137 (576)
Q Consensus 79 ~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~-------~~~~~~----------~~~~~~~~~~~~---- 137 (576)
..+||+|+++.++.++++++|.+.+.+|..|..|.+.|..- .+.+.. ...+.+.+.|+.
T Consensus 110 LGnGGLGrLAacfldS~AtL~lP~~GyGirY~yG~F~Q~I~dG~Q~E~pd~Wl~~~~pwe~~r~~~~~~V~f~G~v~~~~ 189 (798)
T PRK14985 110 LGNGGLGRLAACFLDSMATVGQPATGYGLNYQYGLFRQSFVDGKQVEAPDDWHRDSYPWFRHNEALDVQVGIGGKVTKQD 189 (798)
T ss_pred CCCcchHHHHHHHHHHHHhCCCCeEEEEeccCCCCeEEEEECCeEEECCCCcccCCCCceecCCCceEEEeeCCEEEeeC
Confidence 45899999999999999999999999999999996554433 112211 233444333322
Q ss_pred ----------------------------eEEEEEEeeecCeEEEEec-----------CCCCCC--CCCCCCCCCCCCCc
Q 008154 138 ----------------------------QEIAFFHEYREGVDWVFVD-----------HPSYHR--PGNPYGDINGAFGD 176 (576)
Q Consensus 138 ----------------------------~~~~~~~~~~~gv~v~~l~-----------~~~~~~--~~~~y~~~~~~~~~ 176 (576)
..+|+|....+. .+.+.+ +....+ +..+|++-. .+..
T Consensus 190 G~~~w~~~~~v~avpyDvpi~Gy~~~~~n~LRLW~a~~~~-~~~l~~fn~gdy~~a~en~~~~e~It~~LYp~D~-~~~G 267 (798)
T PRK14985 190 GRERWEPAFTITGEAWDLPVVGYRNGVAQPLRLWQATHAH-PFDLTKFNDGDFLRAEQQGIDAEKLTKVLYPNDN-HTAG 267 (798)
T ss_pred CcEEEECCEEEEEEeccccccCCCCCceEEEEEeEcCCCC-ccCHHHcCCcchhhccccchhhcchhceecCCCC-Ccch
Confidence 233333333222 222211 111122 456787511 1112
Q ss_pred hHHHH---HHHHHHHHh-hcccCCC--CCCCC-CCccEEEeCCCccchHHH-HHHhhc----cCCCCCC---CCcEEEEe
Q 008154 177 NQFRY---TLLCYAACE-APLVLPL--GGFTY-GEKCIFLVNDWHAGLVPV-LLASKY----RPHGVYK---DARSILVI 241 (576)
Q Consensus 177 ~~~r~---~~~~~~~~~-~~~~~~~--~~~~~-~~pDVvH~~~~~~~~~~~-~l~~~~----~~~~~~~---~~~~v~t~ 241 (576)
.+.|+ .+++.+.++ +++.... ..+.. .+|.+||+||.|++++.. +++... ..+..+. ...++||+
T Consensus 268 k~lRLkQEyfl~sa~vqdilr~~~~~~~~l~~l~~~~~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTn 347 (798)
T PRK14985 268 KKLRLMQQYFQCACSVADILRRHHLAGRKLHELPDYEVIQLNDTHPTIAIPELLRVLLDEHQLSWDDAWAITSKTFAYTN 347 (798)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhCCCCcEEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHHheeeec
Confidence 47777 456666555 4322110 11211 178999999999998744 333211 1111111 23789999
Q ss_pred ecCCCCC--CCChhhhhhc-CCChhhhcccccccccccccc-cCCc----------CccchhHHHHHHhccceeccCccc
Q 008154 242 HNLSHQG--VEPAATYKNL-GLPSEWYGALEWVFPTWARTH-ALDT----------GEAVNVLKGAIVTADRLLTVSKGY 307 (576)
Q Consensus 242 H~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~----------~~~~~~~~~a~~~ad~v~~vS~~~ 307 (576)
||+.+.+ .||.++++.+ +-....+...-..+....+.. +.+. .+.++|..+|+..|..|++||+.+
T Consensus 348 HT~lpealE~w~~~l~~~~Lpr~~~ii~~in~~fl~~~~~~~~~d~~~~~~~sii~~~~v~Ma~LAi~~S~~vNGVS~lH 427 (798)
T PRK14985 348 HTLMPEALECWDEKLVKSLLPRHMQIIKEINTRFKTLVEKTWPGDKKVWAKLAVVHDKQVRMANLCVVSGFAVNGVAALH 427 (798)
T ss_pred CCCChhhhCCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHhCCCcHHHhhhhhhccCCeeehHHHHHHhcchhHhhHHHH
Confidence 9997666 7888888544 211111111111111111111 1111 346999999999999999999999
Q ss_pred hhhhccccCCcchhhhhhccCCceeEecCCCCCCCCC---CCCCccccccCCcCCcccchH-------------------
Q 008154 308 SWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWN---PSSDEHIASHYSIDDLSGKVQ------------------- 365 (576)
Q Consensus 308 ~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~---~~~~~~l~~~~~~~~~~~~~~------------------- 365 (576)
.+.+++.++ ......-+.++..++|||+...|. .+....+++.+.+++|..+..
T Consensus 428 ~eil~~~~f----~df~~l~p~kf~nvTNGVt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~~~ 503 (798)
T PRK14985 428 SDLVVKDLF----PEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKTLKKEWANDLDQLINLEKYADDAAFRQQYR 503 (798)
T ss_pred hchhHHhhh----hhhHhhCCCccCCcCCCcCcchhhhhhCHHHHHHHHHhcCcchhhChHHHHHhhccCCcHHHHHHHH
Confidence 877665443 223344567788999999999998 666778888888877752221
Q ss_pred ---------hHHHHHHHcCCCCCCCCCEEEEecccccccCHHH-HHHHHHhhhc---------CCcEEEEEeCCChhhHH
Q 008154 366 ---------CKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDL-IRLAAPEILA---------DDIQFVMLGSGDPQFES 426 (576)
Q Consensus 366 ---------~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~-ll~a~~~L~~---------~~~~lii~G~g~~~~~~ 426 (576)
....+++..|+..+++.+.++++.||..||+..+ ++..+.++.+ .|.++||+|+++|.+..
T Consensus 504 ~vK~~nK~~L~~~i~~~~g~~ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~ 583 (798)
T PRK14985 504 EIKQANKVRLAEFVKQRTGIEINPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYL 583 (798)
T ss_pred HHHHHHHHHHHHHHHHHhCCccCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHH
Confidence 1123344557777799999999999999999999 8887766543 26899999999888776
Q ss_pred HHHHHHH------H------hc--CceEEEccCChhHHHHHHhcCCEEEeCCC--CCCCcHHHHHHHHcCCceEEeCccc
Q 008154 427 WMRDTEA------T------YK--DKYRGWVGFNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYGTIPVVHATGG 490 (576)
Q Consensus 427 ~~~~~~~------~------~~--~~~~~~~~~~~~~~~~ll~~~Dv~v~ps~--~E~~g~s~lEAma~G~pvIat~~gg 490 (576)
.++.++. . .. .+++++++|+..++..++++|||+.+.|+ .|++|++.|++|.+|.++++|.+||
T Consensus 584 aK~iIklI~~va~~in~Dp~v~~~lkVVFlenY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGa 663 (798)
T PRK14985 584 AKNIIFAINKVAEVINNDPLVGDKLKVVFLPDYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGA 663 (798)
T ss_pred HHHHHHHHHHHHHHhcCChhhCCceeEEEeCCCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccch
Confidence 6665543 1 12 27999999999999999999999999998 7999999999999999999999999
Q ss_pred cccccccccccccCCCCCcceeEeC
Q 008154 491 LRDTVENFNPFAREGSGEGTGWSFL 515 (576)
Q Consensus 491 ~~e~i~~~~~~~~~~~~~~~G~~~~ 515 (576)
+.|+.... +++|||+|.
T Consensus 664 nvEi~e~v--------G~eN~f~fG 680 (798)
T PRK14985 664 NVEIAEQV--------GEENIFIFG 680 (798)
T ss_pred HHHHHHHh--------CcCcEEEeC
Confidence 99999742 247888883
No 49
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1e-30 Score=269.85 Aligned_cols=350 Identities=20% Similarity=0.213 Sum_probs=237.5
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++..++|. .||.++++.+++++|+++||+|++++........ . ..
T Consensus 1 kil~i~~~~~p~--~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~--~---------------------------~~ 49 (357)
T cd03795 1 RVLHVGKFYPPD--RGGIEQVIRDLAEGLAARGIEVAVLCASPEPKGR--D---------------------------EE 49 (357)
T ss_pred CeeEecCCCCCC--CCcHHHHHHHHHHHHHhCCCceEEEecCCCCcch--h---------------------------hh
Confidence 699999998884 7999999999999999999999999865322110 0 00
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhc
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 226 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~ 226 (576)
..+.+++.++..... ....+ ...+ +.. .. . . ..+||+||+|..............
T Consensus 50 ~~~~~~~~~~~~~~~-~~~~~----------~~~~--~~~--~~-~--~------~~~~Dii~~~~~~~~~~~~~~~~~- 104 (357)
T cd03795 50 RNGHRVIRAPSLLNV-ASTPF----------SPSF--FKQ--LK-K--L------AKKADVIHLHFPNPLADLALLLLP- 104 (357)
T ss_pred ccCceEEEeeccccc-ccccc----------cHHH--HHH--HH-h--c------CCCCCEEEEecCcchHHHHHHHhc-
Confidence 122333333211100 00000 0000 000 00 0 1 117999999875443222222111
Q ss_pred cCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCcc
Q 008154 227 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 306 (576)
Q Consensus 227 ~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~ 306 (576)
.++|.+++.|+...... ..... ...+++..++.||.++++|+.
T Consensus 105 ------~~~~~i~~~h~~~~~~~----------~~~~~---------------------~~~~~~~~~~~~d~vi~~s~~ 147 (357)
T cd03795 105 ------RKKPVVVHWHSDIVKQK----------LLLKL---------------------YRPLQRRFLRRADAIVATSPN 147 (357)
T ss_pred ------cCceEEEEEcChhhccc----------hhhhh---------------------hhHHHHHHHHhcCEEEeCcHH
Confidence 36789999996421110 00000 013566788999999999998
Q ss_pred chhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEE
Q 008154 307 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 386 (576)
Q Consensus 307 ~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~ 386 (576)
..+.+.. . .....++.+||||++...+.+.... .. .....+ .+.+.|+
T Consensus 148 ~~~~~~~---------~-~~~~~~~~~i~~gi~~~~~~~~~~~-----------------~~---~~~~~~--~~~~~i~ 195 (357)
T cd03795 148 YAETSPV---------L-RRFRDKVRVIPLGLDPARYPRPDAL-----------------EE---AIWRRA--AGRPFFL 195 (357)
T ss_pred HHHHHHH---------h-cCCccceEEecCCCChhhcCCcchh-----------------hh---HhhcCC--CCCcEEE
Confidence 8765431 1 1223678999999998877654321 00 112222 4678999
Q ss_pred EecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHH-HhcCceEEEccC-ChhHHHHHHhcCCEEEeCC
Q 008154 387 FIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEA-TYKDKYRGWVGF-NVPISHRITAGCDILLMPS 464 (576)
Q Consensus 387 ~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~ll~~~Dv~v~ps 464 (576)
++||+.+.||++.+++|+.++. +++++|+|+|+. .....+.+.+ ....++.+ .++ +.+.+..+++.||++++||
T Consensus 196 ~~G~~~~~K~~~~li~a~~~l~--~~~l~i~G~g~~-~~~~~~~~~~~~~~~~V~~-~g~v~~~~~~~~~~~ad~~i~ps 271 (357)
T cd03795 196 FVGRLVYYKGLDVLLEAAAALP--DAPLVIVGEGPL-EAELEALAAALGLLDRVRF-LGRLDDEEKAALLAACDVFVFPS 271 (357)
T ss_pred EecccccccCHHHHHHHHHhcc--CcEEEEEeCChh-HHHHHHHHHhcCCcceEEE-cCCCCHHHHHHHHHhCCEEEeCC
Confidence 9999999999999999999986 799999999852 3333333322 22334544 444 5566778999999999999
Q ss_pred C--CCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHH
Q 008154 465 R--FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEG 542 (576)
Q Consensus 465 ~--~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~ 542 (576)
. .|++|++++|||++|+|||+++.++..+.+.+ .+.+|++++++|+++++++|.+++. |++.+.+
T Consensus 272 ~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~---------~~~~g~~~~~~d~~~~~~~i~~l~~----~~~~~~~ 338 (357)
T cd03795 272 VERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNL---------HGVTGLVVPPGDPAALAEAIRRLLE----DPELRER 338 (357)
T ss_pred cccccccchHHHHHHHcCCCEEecCCCCchhHHhh---------CCCceEEeCCCCHHHHHHHHHHHHH----CHHHHHH
Confidence 7 59999999999999999999999999988763 1689999999999999999999986 8888888
Q ss_pred HHHHH---HhhhCCHHHHH
Q 008154 543 LMRRG---MEKDYTWENAA 558 (576)
Q Consensus 543 ~~~~a---~~~~fs~~~~~ 558 (576)
+++++ +.++|||+.++
T Consensus 339 ~~~~~~~~~~~~~s~~~~~ 357 (357)
T cd03795 339 LGEAARERAEEEFTADRMV 357 (357)
T ss_pred HHHHHHHHHHHhcchHhhC
Confidence 88877 46799999874
No 50
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=5.3e-31 Score=281.99 Aligned_cols=290 Identities=21% Similarity=0.241 Sum_probs=206.6
Q ss_pred CccEEEeCCC-ccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhh-hhcCC--Chhhhcccccccccccccc
Q 008154 204 EKCIFLVNDW-HAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATY-KNLGL--PSEWYGALEWVFPTWARTH 279 (576)
Q Consensus 204 ~pDVvH~~~~-~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~ 279 (576)
++||+|+|.. .++++..+++.. .++|+|+|.|+.. +.+.. ..... ....+.....
T Consensus 173 ~~dviH~~s~~~~g~~~~~~~~~-------~~~p~I~t~Hg~~-----~~e~~~~~~~~~~~~~~~~~~~~--------- 231 (475)
T cd03813 173 KADVYHAVSTGYAGLLGALAKAR-------RGTPFLLTEHGIY-----TRERKIELLQADWEMSYFRRLWI--------- 231 (475)
T ss_pred CCCEEeccCcchHHHHHHHHHHH-------hCCCEEEecCCcc-----HHHHHHHHHhcccchHHHHHHHH---------
Confidence 7899999964 333444444433 5799999999752 21111 00000 0000000000
Q ss_pred cCCcCccchhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCC
Q 008154 280 ALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDD 359 (576)
Q Consensus 280 ~~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~ 359 (576)
.-...+++.+++.||.++++|+...+... ..+.+..++.+||||+|.+.|.+....
T Consensus 232 ----~~~~~l~~~~~~~ad~Ii~~s~~~~~~~~----------~~g~~~~ki~vIpNgid~~~f~~~~~~---------- 287 (475)
T cd03813 232 ----RFFESLGRLAYQAADRITTLYEGNRERQI----------EDGADPEKIRVIPNGIDPERFAPARRA---------- 287 (475)
T ss_pred ----HHHHHHHHHHHHhCCEEEecCHHHHHHHH----------HcCCCHHHeEEeCCCcCHHHcCCcccc----------
Confidence 00013567788999999999998765432 224456789999999998877654311
Q ss_pred cccchHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCC--hhhHHHHHHHHHHh
Q 008154 360 LSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGD--PQFESWMRDTEATY 435 (576)
Q Consensus 360 ~~~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~--~~~~~~~~~~~~~~ 435 (576)
..+ ++.++|+++||+.+.||++.+++|++.+.+ ++++++|+|+++ +.+.+..+.+.+..
T Consensus 288 ---------------~~~--~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~~~~~~~e~~~li~~l 350 (475)
T cd03813 288 ---------------RPE--KEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDEDPEYAEECRELVESL 350 (475)
T ss_pred ---------------ccC--CCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCcChHHHHHHHHHHHHh
Confidence 011 467899999999999999999999999876 689999999984 22223333333332
Q ss_pred --cCceEEEccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeE
Q 008154 436 --KDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWS 513 (576)
Q Consensus 436 --~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~ 513 (576)
..++. +.|. . ....+++.+|++|+||..|++|++++||||||+|||+|+.|+..|++.+.+.+ .-|.+|++
T Consensus 351 ~l~~~V~-f~G~-~-~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~----~~g~~G~l 423 (475)
T cd03813 351 GLEDNVK-FTGF-Q-NVKEYLPKLDVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDE----ALGPAGEV 423 (475)
T ss_pred CCCCeEE-EcCC-c-cHHHHHHhCCEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCccc----ccCCceEE
Confidence 23444 4552 3 34579999999999999999999999999999999999999999999761100 01458999
Q ss_pred eCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH---HhhhCCHHHHHHHHHHHHH
Q 008154 514 FLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 514 ~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a---~~~~fs~~~~~~~y~~~y~ 566 (576)
++++|+++++++|.+++. |++.+.++++++ +.+.|+|++++++|.++|+
T Consensus 424 v~~~d~~~la~ai~~ll~----~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 424 VPPADPEALARAILRLLK----DPELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred ECCCCHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 999999999999999875 888888888877 4578999999999999984
No 51
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=100.00 E-value=8.1e-31 Score=270.97 Aligned_cols=366 Identities=21% Similarity=0.250 Sum_probs=239.2
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++..+.| ..||.++++..++++|++.||+|+++++....... ....
T Consensus 1 kIl~i~~~~~~--~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~---~~~~------------------------- 50 (375)
T cd03821 1 KILHVIPSFDP--KYGGPVRVVLNLSKALAKLGHEVTVATTDAGGDPL---LVAL------------------------- 50 (375)
T ss_pred CeEEEcCCCCc--ccCCeehHHHHHHHHHHhcCCcEEEEecCCCCccc---hhhc-------------------------
Confidence 69999988766 37999999999999999999999999875322110 0000
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccch-HHHHHHhh
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGL-VPVLLASK 225 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~-~~~~l~~~ 225 (576)
..++..... ..... ... .... .+........... ..+||+||+|+..... .......+
T Consensus 51 -~~~~~~~~~-~~~~~---~~~---------~~~~-~~~~~~~~~~~~~------~~~~dii~~~~~~~~~~~~~~~~~~ 109 (375)
T cd03821 51 -NGVPVKLFS-INVAY---GLN---------LARY-LFPPSLLAWLRLN------IREADIVHVHGLWSYPSLAAARAAR 109 (375)
T ss_pred -cCceeeecc-cchhh---hhh---------hhhh-ccChhHHHHHHHh------CCCCCEEEEecccchHHHHHHHHHH
Confidence 000000000 00000 000 0000 0000000000001 1179999999733322 22222211
Q ss_pred ccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCc
Q 008154 226 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 305 (576)
Q Consensus 226 ~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~ 305 (576)
. .++|++++.|+.......+ ...+... .......+..++.++.++++|.
T Consensus 110 ~------~~~~~i~~~~~~~~~~~~~----------~~~~~~~---------------~~~~~~~~~~~~~~~~i~~~s~ 158 (375)
T cd03821 110 K------YGIPYVVSPHGMLDPWALP----------HKALKKR---------------LAWFLFERRLLQAAAAVHATSE 158 (375)
T ss_pred H------hCCCEEEEccccccccccc----------cchhhhH---------------HHHHHHHHHHHhcCCEEEECCH
Confidence 1 4689999999753211100 0000000 0011244566778999999986
Q ss_pred cchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEE
Q 008154 306 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 385 (576)
Q Consensus 306 ~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i 385 (576)
....... ......++.+||||+|.+.+.+.... .. ++..+.+ .+.+++
T Consensus 159 ~~~~~~~-----------~~~~~~~~~vi~~~~~~~~~~~~~~~------------------~~-~~~~~~~--~~~~~i 206 (375)
T cd03821 159 QEAAEIR-----------RLGLKAPIAVIPNGVDIPPFAALPSR------------------GR-RRKFPIL--PDKRII 206 (375)
T ss_pred HHHHHHH-----------hhCCcccEEEcCCCcChhccCcchhh------------------hh-hhhccCC--CCCcEE
Confidence 6554432 12345679999999998877654321 11 4444544 577899
Q ss_pred EEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHH--hcCceEEEccC-ChhHHHHHHhcCCEE
Q 008154 386 GFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEAT--YKDKYRGWVGF-NVPISHRITAGCDIL 460 (576)
Q Consensus 386 ~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~ll~~~Dv~ 460 (576)
+++||+.+.||++.+++|+..+.+ ++++++++|.+++......+.+.+. ...++. +.++ +.+....+++.||++
T Consensus 207 ~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~v~-~~g~~~~~~~~~~~~~adv~ 285 (375)
T cd03821 207 LFLGRLHPKKGLDLLIEAFAKLAERFPDWHLVIAGPDEGGYRAELKQIAAALGLEDRVT-FTGMLYGEDKAAALADADLF 285 (375)
T ss_pred EEEeCcchhcCHHHHHHHHHHhhhhcCCeEEEEECCCCcchHHHHHHHHHhcCccceEE-EcCCCChHHHHHHHhhCCEE
Confidence 999999999999999999999987 6899999999865555555544222 233444 4444 555677899999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHH
Q 008154 461 LMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSW 540 (576)
Q Consensus 461 v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~ 540 (576)
++||.+|++|++++|||+||+|+|+++.++..+.+.+ .+|+++++ ++++++++|.+++. +++.+
T Consensus 286 v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-----------~~~~~~~~-~~~~~~~~i~~l~~----~~~~~ 349 (375)
T cd03821 286 VLPSHSENFGIVVAEALACGTPVVTTDKVPWQELIEY-----------GCGWVVDD-DVDALAAALRRALE----LPQRL 349 (375)
T ss_pred EeccccCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-----------CceEEeCC-ChHHHHHHHHHHHh----CHHHH
Confidence 9999999999999999999999999999999999875 68888765 56999999998876 77777
Q ss_pred HHHHHHH---HhhhCCHHHHHHHHHH
Q 008154 541 EGLMRRG---MEKDYTWENAAIQYEQ 563 (576)
Q Consensus 541 ~~~~~~a---~~~~fs~~~~~~~y~~ 563 (576)
.++++++ +.++|+|++++++|.+
T Consensus 350 ~~~~~~~~~~~~~~~s~~~~~~~~~~ 375 (375)
T cd03821 350 KAMGENGRALVEERFSWTAIAQQLLE 375 (375)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHhhC
Confidence 7777766 4789999999999863
No 52
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=100.00 E-value=1.1e-30 Score=271.23 Aligned_cols=384 Identities=19% Similarity=0.190 Sum_probs=256.6
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++..+.|. .||.+.++..++++|++.||+|+++++........ ... . .....
T Consensus 1 kIl~i~~~~~~~--~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~--~~~-~-------------------~~~~~ 56 (394)
T cd03794 1 KILILSQYFPPE--LGGGAFRTTELAEELVKRGHEVTVITGSPNYPSGK--IYK-G-------------------YKREE 56 (394)
T ss_pred CEEEEecccCCc--cCCcceeHHHHHHHHHhCCceEEEEecCCCccccc--ccc-c-------------------ceEEe
Confidence 699999987773 49999999999999999999999998754322110 000 0 01123
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCc-cchHHHHHHhh
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWH-AGLVPVLLASK 225 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~-~~~~~~~l~~~ 225 (576)
.++++++.+......... .+ .....+..+.......... ...+||+||+|.+. ....+.....+
T Consensus 57 ~~~~~~~~~~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~~------~~~~~D~v~~~~~~~~~~~~~~~~~~ 121 (394)
T cd03794 57 VDGVRVHRVPLPPYKKNG-LL--------KRLLNYLSFALSALLALLK------RRRRPDVIIATSPPLLIALAALLLAR 121 (394)
T ss_pred cCCeEEEEEecCCCCccc-hH--------HHHHhhhHHHHHHHHHHHh------cccCCCEEEEcCChHHHHHHHHHHHH
Confidence 457777777543322110 10 1111222222222222110 11279999999732 22223333332
Q ss_pred ccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCc
Q 008154 226 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 305 (576)
Q Consensus 226 ~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~ 305 (576)
. .++|+++++|+.. +................ .....+++..++.+|.++++|+
T Consensus 122 ~------~~~~~i~~~h~~~-----~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~d~vi~~s~ 174 (394)
T cd03794 122 L------KGAPFVLEVRDLW-----PESAVALGLLKNGSLLY----------------RLLRKLERLIYRRADAIVVISP 174 (394)
T ss_pred h------cCCCEEEEehhhc-----chhHHHccCccccchHH----------------HHHHHHHHHHHhcCCEEEEECH
Confidence 2 4789999999862 11111111100000000 0011356778899999999999
Q ss_pred cchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEE
Q 008154 306 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 385 (576)
Q Consensus 306 ~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i 385 (576)
...+.+. .......++.++|||++...+.+.... .. +.....+ .+.+++
T Consensus 175 ~~~~~~~----------~~~~~~~~~~~i~~~~~~~~~~~~~~~------------------~~-~~~~~~~--~~~~~i 223 (394)
T cd03794 175 GMREYLV----------RRGVPPEKISVIPNGVDLELFKPPPAD------------------ES-LRKELGL--DDKFVV 223 (394)
T ss_pred HHHHHHH----------hcCCCcCceEEcCCCCCHHHcCCccch------------------hh-hhhccCC--CCcEEE
Confidence 8887653 123456789999999997766554321 01 2222222 467899
Q ss_pred EEecccccccCHHHHHHHHHhhhcC-CcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEeCC
Q 008154 386 GFIGRLDYQKGIDLIRLAAPEILAD-DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPS 464 (576)
Q Consensus 386 ~~~Gr~~~~Kg~~~ll~a~~~L~~~-~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps 464 (576)
+++|++.+.||++.+++++..+.+. +++++++|+++. .+...+.+......++......+.+....+++.||++++|+
T Consensus 224 ~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i~G~~~~-~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i~~~ 302 (394)
T cd03794 224 LYAGNIGRAQGLDTLLEAAALLKDRPDIRFLIVGDGPE-KEELKELAKALGLDNVTFLGRVPKEELPELLAAADVGLVPL 302 (394)
T ss_pred EEecCcccccCHHHHHHHHHHHhhcCCeEEEEeCCccc-HHHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhhCeeEEec
Confidence 9999999999999999999999774 899999999853 34444433333334555444446667778999999999999
Q ss_pred CCCCC-----cHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHH
Q 008154 465 RFEPC-----GLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSS 539 (576)
Q Consensus 465 ~~E~~-----g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~ 539 (576)
..|++ +++++|||++|+|+|+++.++..+.+.+ +.+|++++++|+++++++|.+++. |++.
T Consensus 303 ~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~----------~~~g~~~~~~~~~~l~~~i~~~~~----~~~~ 368 (394)
T cd03794 303 KPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEE----------AGAGLVVPPGDPEALAAAILELLD----DPEE 368 (394)
T ss_pred cCcccccccCchHHHHHHHCCCcEEEecCCCchhhhcc----------CCcceEeCCCCHHHHHHHHHHHHh----ChHH
Confidence 98865 7889999999999999999999999987 789999999999999999999985 7888
Q ss_pred HHHHHHHH---HhhhCCHHHHHHHHH
Q 008154 540 WEGLMRRG---MEKDYTWENAAIQYE 562 (576)
Q Consensus 540 ~~~~~~~a---~~~~fs~~~~~~~y~ 562 (576)
+.++++++ +.++|||+.++++|+
T Consensus 369 ~~~~~~~~~~~~~~~~s~~~~~~~~~ 394 (394)
T cd03794 369 RAEMGENGRRYVEEKFSREKLAERLL 394 (394)
T ss_pred HHHHHHHHHHHHHHhhcHHHHHHhcC
Confidence 88888877 345899999998873
No 53
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=100.00 E-value=4.1e-30 Score=265.75 Aligned_cols=350 Identities=20% Similarity=0.260 Sum_probs=236.8
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++.. +| ..||+++++.+++++|++.||+|.+++......... ....
T Consensus 1 kI~~v~~~-~~--~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~---~~~~------------------------ 50 (366)
T cd03822 1 RIALVSPY-PP--RKCGIATFTTDLVNALSARGPDVLVVSVAALYPSLL---YGGE------------------------ 50 (366)
T ss_pred CeEEecCC-CC--CCCcHHHHHHHHHHHhhhcCCeEEEEEeecccCccc---CCCc------------------------
Confidence 69999875 55 279999999999999999999999998653321110 0000
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHH---HHH
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPV---LLA 223 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~---~l~ 223 (576)
......... +. ...+. ...+.+... +||+||++++.+.+.+. .+.
T Consensus 51 ~~~~~~~~~----~~----------------~~~~~----~~~~~~~~~--------~~dii~~~~~~~~~~~~~~~~~~ 98 (366)
T cd03822 51 QEVVRVIVL----DN----------------PLDYR----RAARAIRLS--------GPDVVVIQHEYGIFGGEAGLYLL 98 (366)
T ss_pred ccceeeeec----CC----------------chhHH----HHHHHHhhc--------CCCEEEEeeccccccchhhHHHH
Confidence 000000000 00 00111 111122111 79999998854432211 111
Q ss_pred hhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceecc
Q 008154 224 SKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTV 303 (576)
Q Consensus 224 ~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~v 303 (576)
.... ..++|+|+++|+..... .. .....+.+..++.+|.++++
T Consensus 99 ~~~~----~~~~~~i~~~h~~~~~~------------~~---------------------~~~~~~~~~~~~~~d~ii~~ 141 (366)
T cd03822 99 LLLR----GLGIPVVVTLHTVLLHE------------PR---------------------PGDRALLRLLLRRADAVIVM 141 (366)
T ss_pred HHHh----hcCCCEEEEEecCCccc------------cc---------------------hhhhHHHHHHHhcCCEEEEe
Confidence 1100 15789999999851100 00 00012456677899999999
Q ss_pred CccchhhhccccCCcchhhhhhcc-CCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCC
Q 008154 304 SKGYSWEITTVEGGYGLHEILSSR-KSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDC 382 (576)
Q Consensus 304 S~~~~~~~~~~~~~~~l~~~~~~~-~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 382 (576)
|....++ .+... ..++.+||||++...+.+... . +....+ .+.
T Consensus 142 s~~~~~~------------~~~~~~~~~~~~i~~~~~~~~~~~~~~--------------------~--~~~~~~--~~~ 185 (366)
T cd03822 142 SSELLRA------------LLLRAYPEKIAVIPHGVPDPPAEPPES--------------------L--KALGGL--DGR 185 (366)
T ss_pred eHHHHHH------------HHhhcCCCcEEEeCCCCcCcccCCchh--------------------h--HhhcCC--CCC
Confidence 7332222 22222 468999999999765543211 0 122222 467
Q ss_pred CEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHH----HHH-HhcCceEEEcc-CChhHHHHHH
Q 008154 383 PLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRD----TEA-TYKDKYRGWVG-FNVPISHRIT 454 (576)
Q Consensus 383 ~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~----~~~-~~~~~~~~~~~-~~~~~~~~ll 454 (576)
++++|+||+.+.||++.+++|+..+.+ ++++|+|+|++++........ +.+ ....++.+..+ .+.+....++
T Consensus 186 ~~i~~~G~~~~~K~~~~ll~a~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~~~~ 265 (366)
T cd03822 186 PVLLTFGLLRPYKGLELLLEALPLLVAKHPDVRLLVAGETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELPELF 265 (366)
T ss_pred eEEEEEeeccCCCCHHHHHHHHHHHHhhCCCeEEEEeccCccchhhhhhhhHhHHHhcCCCCcEEEecCcCCHHHHHHHH
Confidence 899999999999999999999999976 589999999986433332221 332 23456666656 4566677899
Q ss_pred hcCCEEEeCCCCC--CCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHH
Q 008154 455 AGCDILLMPSRFE--PCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRT 532 (576)
Q Consensus 455 ~~~Dv~v~ps~~E--~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~ 532 (576)
+.||++++||.+| ++|++++|||++|+|+|+++.|+ .+.+.+ +.+|++++++|+++++++|..++.
T Consensus 266 ~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~----------~~~g~~~~~~d~~~~~~~l~~l~~- 333 (366)
T cd03822 266 SAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLD----------GGTGLLVPPGDPAALAEAIRRLLA- 333 (366)
T ss_pred hhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-hheeee----------CCCcEEEcCCCHHHHHHHHHHHHc-
Confidence 9999999999999 99999999999999999999999 666666 689999999999999999998875
Q ss_pred hhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHH
Q 008154 533 YREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 533 ~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~ 566 (576)
+++.+.++++++ ..++|||+.++++|.++|+
T Consensus 334 ---~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 366 (366)
T cd03822 334 ---DPELAQALRARAREYARAMSWERVAERYLRLLA 366 (366)
T ss_pred ---ChHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhC
Confidence 778888888877 3456999999999999873
No 54
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=100.00 E-value=5.5e-31 Score=277.01 Aligned_cols=382 Identities=16% Similarity=0.057 Sum_probs=233.4
Q ss_pred EEEEeeccCCccccC-cHHHHHhhHHHHHHhC--CCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEE
Q 008154 68 IVFVTAEAAPYSKTG-GLGDVCGSLPVALAAR--GHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFH 144 (576)
Q Consensus 68 I~~~s~e~~P~~~~G-G~~~~~~~la~~l~~~--G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (576)
|+|+ +|+...| |.++++.+.+++|++. ||+|+++|.++..... ..... ...+++.
T Consensus 3 ~~f~----hp~~~~ggg~ervl~~a~~~l~~~~~~~~v~i~t~~~~~~~~--~~l~~---~~~~f~~------------- 60 (419)
T cd03806 3 VGFF----HPYCNAGGGGERVLWCAVRALQKRYPNNIVVIYTGDLDATPE--EILEK---VESRFNI------------- 60 (419)
T ss_pred EEEE----CCCCCCCCCchHHHHHHHHHHHHhCCCcEEEEECCCCCCCHH--HHHHH---HHHhcCe-------------
Confidence 6777 6665566 9999999999999998 8999999988755321 00000 0011111
Q ss_pred eeecCeEEEEec-CCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHH
Q 008154 145 EYREGVDWVFVD-HPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLA 223 (576)
Q Consensus 145 ~~~~gv~v~~l~-~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~ 223 (576)
...++++++.+. ...+..+ ..++. + -.. ...+. .+...++.+. .+ +||||..|.+.+...+....
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~-~~~~r----~-~~~--~~~~~-~~~~~~~~~~--~~---~pDv~i~~~g~~~~~~~~~~ 126 (419)
T cd03806 61 ELDRPRIVFFLLKYRKLVEA-STYPR----F-TLL--GQALG-SMILGLEALL--KL---VPDIFIDTMGYPFTYPLVRL 126 (419)
T ss_pred ecCCCceEEEEecceeeecc-ccCCc----e-eeH--HHHHH-HHHHHHHHHH--hc---CCCEEEEcCCcccHHHHHHH
Confidence 122455544441 1111111 12221 0 001 11111 1111111110 11 69999888655544343321
Q ss_pred hhccCCCCCCCCcEEEEeecCCCCCCCChhhhhh--cCC---------ChhhhcccccccccccccccCCcCccchhHHH
Q 008154 224 SKYRPHGVYKDARSILVIHNLSHQGVEPAATYKN--LGL---------PSEWYGALEWVFPTWARTHALDTGEAVNVLKG 292 (576)
Q Consensus 224 ~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~--~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (576)
. .++|+|+.+|-|. .+.+++.. .+. ....+....+.+. +.-...+++.
T Consensus 127 --~------~~~~~i~y~h~P~----~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y---------~~~~~~~~~~ 185 (419)
T cd03806 127 --L------GGCPVGAYVHYPT----ISTDMLQKVRSREASYNNSATIARSPVLSKAKLLY---------YRLFAFLYGL 185 (419)
T ss_pred --h------cCCeEEEEecCCc----chHHHHHHHhhccccccCccchhccchHHHHHHHH---------HHHHHHHHHH
Confidence 1 4689999999221 11122211 111 0000000000000 0000126777
Q ss_pred HHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHH
Q 008154 293 AIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQK 372 (576)
Q Consensus 293 a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 372 (576)
+++.||.++++|+++.+.+.+ .+.. ..++.+|+||+|++.+.+....
T Consensus 186 ~~~~aD~ii~~S~~~~~~~~~---------~~~~-~~~~~vi~~gvd~~~~~~~~~~----------------------- 232 (419)
T cd03806 186 AGSFADVVMVNSTWTRNHIRS---------LWKR-NTKPSIVYPPCDVEELLKLPLD----------------------- 232 (419)
T ss_pred HhhcCCEEEECCHHHHHHHHH---------HhCc-CCCcEEEcCCCCHHHhcccccc-----------------------
Confidence 889999999999998877632 2222 2478999999998766543210
Q ss_pred HcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--C-----CcEEEEEeCCCh----hhHHHHHHHHHH--hcCce
Q 008154 373 ELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D-----DIQFVMLGSGDP----QFESWMRDTEAT--YKDKY 439 (576)
Q Consensus 373 ~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~-----~~~lii~G~g~~----~~~~~~~~~~~~--~~~~~ 439 (576)
...+..+|+|+||+.+.||++.+++|++.+.+ + +++++|+|++.. .+.+.++.+.+. +..++
T Consensus 233 -----~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V 307 (419)
T cd03806 233 -----EKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKV 307 (419)
T ss_pred -----cccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeE
Confidence 01356799999999999999999999999875 2 599999998732 122222333322 23456
Q ss_pred EEEccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCcccc-ccccc---cccccccCCCCCcceeEeC
Q 008154 440 RGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGL-RDTVE---NFNPFAREGSGEGTGWSFL 515 (576)
Q Consensus 440 ~~~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~-~e~i~---~~~~~~~~~~~~~~G~~~~ 515 (576)
.+....+.+....+|+.||++|+||..|+||++++||||||+|+|+++.||. .|++. + +.+|++++
T Consensus 308 ~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~----------g~~G~l~~ 377 (419)
T cd03806 308 EFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDG----------GPTGFLAS 377 (419)
T ss_pred EEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCC----------CCceEEeC
Confidence 5555456677779999999999999999999999999999999999998775 57776 5 78999974
Q ss_pred CCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHH
Q 008154 516 PLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAI 559 (576)
Q Consensus 516 ~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~ 559 (576)
|+++++++|.+++.+ +++.+..+.+++ ..++|||+++.+
T Consensus 378 --d~~~la~ai~~ll~~---~~~~~~~~~~~~~~~~~~fs~~~f~~ 418 (419)
T cd03806 378 --TAEEYAEAIEKILSL---SEEERLRIRRAARSSVKRFSDEEFER 418 (419)
T ss_pred --CHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHhhCHHHhcc
Confidence 899999999999862 333333333333 467899998754
No 55
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=100.00 E-value=2.7e-30 Score=266.53 Aligned_cols=341 Identities=17% Similarity=0.155 Sum_probs=239.9
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++..+ | +|.++.+..++++|.++||+|+++++............. .
T Consensus 1 ki~~~~~~~-~----~~~~~~~~~~~~~L~~~g~~v~v~~~~~~~~~~~~~~~~-------------------------~ 50 (355)
T cd03799 1 KIAYLVKEF-P----RLSETFILREILALEAAGHEVEIFSLRPPEDTLVHPEDR-------------------------A 50 (355)
T ss_pred CEEEECCCC-C----CcchHHHHHHHHHHHhCCCeEEEEEecCccccccccccc-------------------------c
Confidence 699999875 4 337889999999999999999999976433211000000 0
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhc
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 226 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~ 226 (576)
.+..+. |. ................++.. +||+||+|..........+..+.
T Consensus 51 -~~~~~~-------------~~-------~~~~~~~~~~~~~~~~~~~~--------~~Dii~~~~~~~~~~~~~~~~~~ 101 (355)
T cd03799 51 -ELARTR-------------YL-------ARSLALLAQALVLARELRRL--------GIDHIHAHFGTTPATVAMLASRL 101 (355)
T ss_pred -cccchH-------------HH-------HHHHHHHHHHHHHHHHHHhc--------CCCEEEECCCCchHHHHHHHHHh
Confidence 000000 00 00111111112222222212 79999999865544444444433
Q ss_pred cCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCcc
Q 008154 227 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 306 (576)
Q Consensus 227 ~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~ 306 (576)
.+++++++.|........ ...+++..++.+|.++++|+.
T Consensus 102 ------~~~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~vi~~s~~ 140 (355)
T cd03799 102 ------GGIPYSFTAHGKDIFRSP-----------------------------------DAIDLDEKLARADFVVAISEY 140 (355)
T ss_pred ------cCCCEEEEEecccccccC-----------------------------------chHHHHHHHhhCCEEEECCHH
Confidence 368999999964211000 002556778899999999999
Q ss_pred chhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEE
Q 008154 307 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 386 (576)
Q Consensus 307 ~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~ 386 (576)
..+.+.+ .+.....++.++|||+|.+.+.+.... ...+.+.|+
T Consensus 141 ~~~~l~~---------~~~~~~~~~~vi~~~~d~~~~~~~~~~----------------------------~~~~~~~i~ 183 (355)
T cd03799 141 NRQQLIR---------LLGCDPDKIHVVHCGVDLERFPPRPPP----------------------------PPGEPLRIL 183 (355)
T ss_pred HHHHHHH---------hcCCCcccEEEEeCCcCHHHcCCcccc----------------------------ccCCCeEEE
Confidence 8877642 223456789999999998776543200 013568899
Q ss_pred EecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHH-hcCceEEEccC-ChhHHHHHHhcCCEEEe
Q 008154 387 FIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEAT-YKDKYRGWVGF-NVPISHRITAGCDILLM 462 (576)
Q Consensus 387 ~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~ll~~~Dv~v~ 462 (576)
++|++.+.||++.+++++..+.+ ++++++++|.++. .+...+.+.+. ...++. +.++ +.+.+..+++.||++++
T Consensus 184 ~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~-~~~~~~~~~~~~~~~~v~-~~g~~~~~~l~~~~~~adi~l~ 261 (355)
T cd03799 184 SVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPL-RDELEALIAELGLEDRVT-LLGAKSQEEVRELLRAADLFVL 261 (355)
T ss_pred EEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCcc-HHHHHHHHHHcCCCCeEE-ECCcCChHHHHHHHHhCCEEEe
Confidence 99999999999999999999876 4899999999863 34444444332 233444 4444 55667789999999999
Q ss_pred CCCC------CCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhC
Q 008154 463 PSRF------EPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREH 536 (576)
Q Consensus 463 ps~~------E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~ 536 (576)
||.. |++|++++|||++|+|+|+++.|+..|++.+ +.+|++++++|+++++++|.+++. +
T Consensus 262 ~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~----------~~~g~~~~~~~~~~l~~~i~~~~~----~ 327 (355)
T cd03799 262 PSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVED----------GETGLLVPPGDPEALADAIERLLD----D 327 (355)
T ss_pred cceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhC----------CCceEEeCCCCHHHHHHHHHHHHh----C
Confidence 9998 9999999999999999999999999999988 779999999999999999999876 7
Q ss_pred HHHHHHHHHHH---HhhhCCHHHHHHH
Q 008154 537 KSSWEGLMRRG---MEKDYTWENAAIQ 560 (576)
Q Consensus 537 ~~~~~~~~~~a---~~~~fs~~~~~~~ 560 (576)
++.+.++++++ +.++|||+.++++
T Consensus 328 ~~~~~~~~~~a~~~~~~~~s~~~~~~~ 354 (355)
T cd03799 328 PELRREMGEAGRARVEEEFDIRKQAAR 354 (355)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHhhc
Confidence 77788888877 4578999998865
No 56
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=100.00 E-value=1e-30 Score=270.23 Aligned_cols=360 Identities=18% Similarity=0.168 Sum_probs=246.1
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++..+.|. ..||+++++.+++++|++.||.|+++++............
T Consensus 1 ~ili~~~~~~~~-~~gG~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~~~~~~--------------------------- 52 (365)
T cd03809 1 RILIDARFLASR-RPTGIGRYARELLRALLKLDPEEVLLLLPGAPGLLLLPLR--------------------------- 52 (365)
T ss_pred CEEEechhhhcC-CCCcHHHHHHHHHHHHHhcCCceEEEEecCccccccccch---------------------------
Confidence 588888876662 4799999999999999999999999987643321110000
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhc
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 226 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~ 226 (576)
..... ........ . ...+............. .+||+||++.+..... +.
T Consensus 53 -~~~~~--~~~~~~~~---~-----------~~~~~~~~~~~~~~~~~--------~~~Dii~~~~~~~~~~------~~ 101 (365)
T cd03809 53 -AALRL--LLRLPRRL---L-----------WGLLFLLRAGDRLLLLL--------LGLDLLHSPHNTAPLL------RL 101 (365)
T ss_pred -hcccc--cccccccc---c-----------cchhhHHHHHHHHHhhh--------cCCCeeeecccccCcc------cC
Confidence 00000 00000000 0 00110111111111111 1799999998766554 11
Q ss_pred cCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCcc
Q 008154 227 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 306 (576)
Q Consensus 227 ~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~ 306 (576)
.++|+++++|+..+... + .... .... .....+++..++.+|.++++|+.
T Consensus 102 ------~~~~~i~~~hd~~~~~~-~----~~~~--~~~~------------------~~~~~~~~~~~~~~d~~i~~s~~ 150 (365)
T cd03809 102 ------RGVPVVVTIHDLIPLRF-P----EYFS--PGFR------------------RYFRRLLRRALRRADAIITVSEA 150 (365)
T ss_pred ------CCCCEEEEeccchhhhC-c----ccCC--HHHH------------------HHHHHHHHHHHHHcCEEEEccHH
Confidence 57999999998632110 0 0000 0000 00123567788999999999999
Q ss_pred chhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEE
Q 008154 307 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 386 (576)
Q Consensus 307 ~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~ 386 (576)
.++.+. ..+.....++.++|||++...+.+.... . +...... ++..+|+
T Consensus 151 ~~~~~~---------~~~~~~~~~~~vi~~~~~~~~~~~~~~~-------------------~-~~~~~~~--~~~~~i~ 199 (365)
T cd03809 151 TKRDLL---------RYLGVPPDKIVVIPLGVDPRFRPPPAEA-------------------E-VLRALYL--LPRPYFL 199 (365)
T ss_pred HHHHHH---------HHhCcCHHHEEeeccccCccccCCCchH-------------------H-HHHHhcC--CCCCeEE
Confidence 887763 2334456789999999998776554321 1 2222323 4678999
Q ss_pred EecccccccCHHHHHHHHHhhhcC--CcEEEEEeCCChhhHHHHHHHHHH-hcCceEEEccCChhHHHHHHhcCCEEEeC
Q 008154 387 FIGRLDYQKGIDLIRLAAPEILAD--DIQFVMLGSGDPQFESWMRDTEAT-YKDKYRGWVGFNVPISHRITAGCDILLMP 463 (576)
Q Consensus 387 ~~Gr~~~~Kg~~~ll~a~~~L~~~--~~~lii~G~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~Dv~v~p 463 (576)
++||+.+.||++.+++++..+.+. +++++++|.+........+.+.+. ...++......+.+.+..+++.||++++|
T Consensus 200 ~~G~~~~~K~~~~~l~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l~p 279 (365)
T cd03809 200 YVGTIEPRKNLERLLEAFARLPAKGPDPKLVIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAALYRGARAFVFP 279 (365)
T ss_pred EeCCCccccCHHHHHHHHHHHHHhcCCCCEEEecCCccccHHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhhhhhccc
Confidence 999999999999999999999774 599999998765444444443222 33344443333566677899999999999
Q ss_pred CCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHH
Q 008154 464 SRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGL 543 (576)
Q Consensus 464 s~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~ 543 (576)
|.+|++|++++|||++|+|||+++.|+..|.+. .+|++++++|+++++++|.+++. |++.+.++
T Consensus 280 s~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~------------~~~~~~~~~~~~~~~~~i~~l~~----~~~~~~~~ 343 (365)
T cd03809 280 SLYEGFGLPVLEAMACGTPVIASNISSLPEVAG------------DAALYFDPLDPEALAAAIERLLE----DPALREEL 343 (365)
T ss_pred chhccCCCCHHHHhcCCCcEEecCCCCccceec------------CceeeeCCCCHHHHHHHHHHHhc----CHHHHHHH
Confidence 999999999999999999999999999999885 47888899999999999999865 88888888
Q ss_pred HHHH--HhhhCCHHHHHHHHHH
Q 008154 544 MRRG--MEKDYTWENAAIQYEQ 563 (576)
Q Consensus 544 ~~~a--~~~~fs~~~~~~~y~~ 563 (576)
++++ ..++|+|++++++|.+
T Consensus 344 ~~~~~~~~~~~sw~~~~~~~~~ 365 (365)
T cd03809 344 RERGLARAKRFSWEKTARRTLD 365 (365)
T ss_pred HHHHHHHHHhCCHHHHHHHHhC
Confidence 8877 4678999999998863
No 57
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=100.00 E-value=3.6e-30 Score=266.24 Aligned_cols=366 Identities=22% Similarity=0.222 Sum_probs=241.8
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++..++|. .||.++.+..++++|+++||+|.++++..........
T Consensus 1 kil~~~~~~~p~--~~G~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~----------------------------- 49 (374)
T cd03817 1 KIGIFTDTYLPQ--VNGVATSIRRLAEELEKRGHEVYVVAPSYPGAPEEEE----------------------------- 49 (374)
T ss_pred CeeEeehhccCC--CCCeehHHHHHHHHHHHcCCeEEEEeCCCCCCCcccc-----------------------------
Confidence 699999998883 7999999999999999999999999976543211000
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccc-hHHHHHHhh
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAG-LVPVLLASK 225 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~-~~~~~l~~~ 225 (576)
...+...........+....+ .+.......+... +||+||+|..... .....+.++
T Consensus 50 ~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~--------~~Div~~~~~~~~~~~~~~~~~~ 106 (374)
T cd03817 50 VVVVRPFRVPTFKYPDFRLPL---------------PIPRALIIILKEL--------GPDIVHTHTPFSLGLLGLRVARK 106 (374)
T ss_pred cccccccccccchhhhhhccc---------------cHHHHHHHHHhhc--------CCCEEEECCchhhhhHHHHHHHH
Confidence 000111000000000000000 0111111112111 7999999874332 222222222
Q ss_pred ccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccc-hhHHHHHHhccceeccC
Q 008154 226 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAV-NVLKGAIVTADRLLTVS 304 (576)
Q Consensus 226 ~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~ad~v~~vS 304 (576)
.++|+|++.|+... ............... ... .+++..++.||.++++|
T Consensus 107 -------~~~~~i~~~~~~~~------~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~d~i~~~s 156 (374)
T cd03817 107 -------LGIPVVATYHTMYE------DYTHYVPLGRLLARA-----------------VVRRKLSRRFYNRCDAVIAPS 156 (374)
T ss_pred -------cCCCEEEEecCCHH------HHHHHHhcccchhHH-----------------HHHHHHHHHHhhhCCEEEecc
Confidence 47899999997521 111111111100000 001 35667788999999999
Q ss_pred ccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCE
Q 008154 305 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPL 384 (576)
Q Consensus 305 ~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 384 (576)
+...+.+.. .. ...++.++|||+|...+.+... ...++..+++ .+.++
T Consensus 157 ~~~~~~~~~----------~~-~~~~~~vi~~~~~~~~~~~~~~-------------------~~~~~~~~~~--~~~~~ 204 (374)
T cd03817 157 EKIADLLRE----------YG-VKRPIEVIPTGIDLDRFEPVDG-------------------DDERRKLGIP--EDEPV 204 (374)
T ss_pred HHHHHHHHh----------cC-CCCceEEcCCccchhccCccch-------------------hHHHHhcCCC--CCCeE
Confidence 987766531 11 2345899999999887765432 2224455554 46789
Q ss_pred EEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHH-HhcCceEEEccCChhHHHHHHhcCCEEE
Q 008154 385 IGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEA-TYKDKYRGWVGFNVPISHRITAGCDILL 461 (576)
Q Consensus 385 i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ll~~~Dv~v 461 (576)
|+++|++.+.||++.+++++..+.+ ++++++++|.++. .+...+.+.+ ....++.+....+.+....+++.||+++
T Consensus 205 i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~~-~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l 283 (374)
T cd03817 205 LLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGPE-REELEELARELGLADRVIFTGFVPREELPDYYKAADLFV 283 (374)
T ss_pred EEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCch-HHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHcCEEE
Confidence 9999999999999999999999876 6899999999852 3333333322 2233454443335566778999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHH
Q 008154 462 MPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWE 541 (576)
Q Consensus 462 ~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~ 541 (576)
+||..|++|++++|||++|+|||+++.|++.|.+.+ +.+|+++++.+. +++++|.+++. +++.+.
T Consensus 284 ~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~----------~~~g~~~~~~~~-~~~~~i~~l~~----~~~~~~ 348 (374)
T cd03817 284 FASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVAD----------GENGFLFPPGDE-ALAEALLRLLQ----DPELRR 348 (374)
T ss_pred ecccccCcChHHHHHHHcCCcEEEeCCCChhhheec----------CceeEEeCCCCH-HHHHHHHHHHh----ChHHHH
Confidence 999999999999999999999999999999999998 899999998777 88888888875 778778
Q ss_pred HHHHHHH--hhhCCHHHHHHHHHHHHHH
Q 008154 542 GLMRRGM--EKDYTWENAAIQYEQVFEW 567 (576)
Q Consensus 542 ~~~~~a~--~~~fs~~~~~~~y~~~y~~ 567 (576)
++++++. .+++. +++++.++|++
T Consensus 349 ~~~~~~~~~~~~~~---~~~~~~~~~~~ 373 (374)
T cd03817 349 RLSKNAEESAEKFS---FAKKVEKLYEE 373 (374)
T ss_pred HHHHHHHHHHHHHH---HHHHHHHHHhc
Confidence 8888773 33444 56667776654
No 58
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.98 E-value=5e-30 Score=264.03 Aligned_cols=355 Identities=21% Similarity=0.170 Sum_probs=237.8
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++..++|. ..||.++++..++++|+++||+|+++++........ ...
T Consensus 1 kIl~i~~~~~~~-~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~---~~~------------------------- 51 (359)
T cd03823 1 RILVVNHLYPPR-SVGGAEVVAHDLAEALAKRGHEVAVLTAGEDPPRQD---KEV------------------------- 51 (359)
T ss_pred CeeEEcccCCcc-cccchHHHHHHHHHHHHhcCCceEEEeCCCCCCCcc---ccc-------------------------
Confidence 699999988773 479999999999999999999999998754332110 000
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHH--HHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHh
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRY--TLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLAS 224 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~ 224 (576)
.+......... ........... .....+ ..+.....+.+... +||+||+|.+.......+...
T Consensus 52 -~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~--------~~dii~~~~~~~~~~~~~~~~ 116 (359)
T cd03823 52 -IGVVVYGRPID-EVLRSALPRDL-----FHLSDYDNPAVVAEFARLLEDF--------RPDVVHFHHLQGLGVSILRAA 116 (359)
T ss_pred -ccceeeccccc-cccCCCchhhh-----hHHHhccCHHHHHHHHHHHHHc--------CCCEEEECCccchHHHHHHHH
Confidence 00000000000 00000000000 000000 11122222332222 799999998643322222222
Q ss_pred hccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccC
Q 008154 225 KYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 304 (576)
Q Consensus 225 ~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS 304 (576)
+. .++|+|++.|+..... +. ... .....|.++++|
T Consensus 117 ~~------~~~~~i~~~hd~~~~~--~~---------~~~----------------------------~~~~~d~ii~~s 151 (359)
T cd03823 117 RD------RGIPIVLTLHDYWLIC--PR---------QGL----------------------------FKKGGDAVIAPS 151 (359)
T ss_pred Hh------cCCCEEEEEeeeeeec--ch---------hhh----------------------------hccCCCEEEEeC
Confidence 22 4689999999752100 00 000 001239999999
Q ss_pred ccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCE
Q 008154 305 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPL 384 (576)
Q Consensus 305 ~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 384 (576)
+...+.+.. . .....++.+|+||+|...+.+... +.+ .+..+
T Consensus 152 ~~~~~~~~~---------~-~~~~~~~~vi~n~~~~~~~~~~~~--------------------------~~~--~~~~~ 193 (359)
T cd03823 152 RFLLDRYVA---------N-GLFAEKISVIRNGIDLDRAKRPRR--------------------------APP--GGRLR 193 (359)
T ss_pred HHHHHHHHH---------c-CCCccceEEecCCcChhhcccccc--------------------------CCC--CCceE
Confidence 988776532 1 112468999999999877654321 112 46788
Q ss_pred EEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEeCC
Q 008154 385 IGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPS 464 (576)
Q Consensus 385 i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps 464 (576)
++++||+.+.||++.+++++..+.+++++|+++|.++..... .... ....++......+.+.+..+++.||++++||
T Consensus 194 i~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i~G~~~~~~~~-~~~~--~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ps 270 (359)
T cd03823 194 FGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIVGNGLELEEE-SYEL--EGDPRVEFLGAYPQEEIDDFYAEIDVLVVPS 270 (359)
T ss_pred EEEEecCccccCHHHHHHHHHHHHhcCcEEEEEcCchhhhHH-HHhh--cCCCeEEEeCCCCHHHHHHHHHhCCEEEEcC
Confidence 999999999999999999999987678999999998643222 1111 2334444443345667778999999999999
Q ss_pred C-CCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHH
Q 008154 465 R-FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGL 543 (576)
Q Consensus 465 ~-~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~ 543 (576)
. .|++|++++|||++|+|+|+++.++..|.+.+ +.+|++++++|++++++++.+++. |++.+.++
T Consensus 271 ~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~----------~~~g~~~~~~d~~~l~~~i~~l~~----~~~~~~~~ 336 (359)
T cd03823 271 IWPENFPLVIREALAAGVPVIASDIGGMAELVRD----------GVNGLLFPPGDAEDLAAALERLID----DPDLLERL 336 (359)
T ss_pred cccCCCChHHHHHHHCCCCEEECCCCCHHHHhcC----------CCcEEEECCCCHHHHHHHHHHHHh----ChHHHHHH
Confidence 8 79999999999999999999999999999988 789999999999999999999876 78888888
Q ss_pred HHHHHhhhCCHHHHHHHHHHHHH
Q 008154 544 MRRGMEKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 544 ~~~a~~~~fs~~~~~~~y~~~y~ 566 (576)
++++.. .++.+.++++|.++|+
T Consensus 337 ~~~~~~-~~~~~~~~~~~~~~~~ 358 (359)
T cd03823 337 RAGIEP-PRSIEDQAEEYLKLYR 358 (359)
T ss_pred HHhHHH-hhhHHHHHHHHHHHhh
Confidence 887643 3455999999999886
No 59
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=99.98 E-value=2.9e-31 Score=284.18 Aligned_cols=419 Identities=15% Similarity=0.098 Sum_probs=280.0
Q ss_pred cccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccC------------------ceeEEEeecCC----
Q 008154 79 SKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDL------------------GCCMKICCFGG---- 136 (576)
Q Consensus 79 ~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~---- 136 (576)
...||+|+++.++.++++++|.+.+.+|..|..|.+.|.. .+.++. ...+.|.+.|+
T Consensus 101 LGnGGLGrLAacfldS~Atl~~P~~GyGirY~yG~F~Q~I-~dG~Q~E~pd~Wl~~~~pwe~~r~~~~~~V~f~G~v~~~ 179 (794)
T TIGR02093 101 LGNGGLGRLAACFLDSLATLGLPATGYGIRYEYGLFKQKI-VDGWQVELPDDWLRYGNPWEIRRPDRSYEVRFGGRVELQ 179 (794)
T ss_pred CCCCchHHHHHHHHHHHHhCCCCeEEEEeeecCCceEEEE-ECCEEEEcCCCcCCCCCCceeecCCcEEEEEeCCEEeee
Confidence 4689999999999999999999999999999999665443 222221 22344444442
Q ss_pred --------------------------------eeEEEEEEeeecCeEEEEec------------CCCCCC--CCCCCCCC
Q 008154 137 --------------------------------EQEIAFFHEYREGVDWVFVD------------HPSYHR--PGNPYGDI 170 (576)
Q Consensus 137 --------------------------------~~~~~~~~~~~~gv~v~~l~------------~~~~~~--~~~~y~~~ 170 (576)
...+|+|.... ++.+.++ +....+ +..+|++.
T Consensus 180 ~~~g~~~~~w~~~~~v~avpyD~pi~Gy~~~~vn~LRLW~a~~--~~~f~l~~fn~gdy~~a~~~~~~~e~It~vLYp~D 257 (794)
T TIGR02093 180 PDSDRLRPRWVPAETVLAIPYDVPVPGYRTDTVNTLRLWSAEA--PEEFDLDAFNAGDYYEAVEEKNRAENISRVLYPND 257 (794)
T ss_pred ccCCcceeEeeCceEEEEeecceeecCCCCCceEEEEEEEecC--ccccCHhhccCccHhhhhhChhhcCccccCCcCCC
Confidence 22223333222 1111111 111122 45678761
Q ss_pred CCCCCchHHHH---HHHHHHHHhhc-ccC-----CCCCCCCCCccEEEeCCCccchHHH-HHHhhc----cCCCCCC---
Q 008154 171 NGAFGDNQFRY---TLLCYAACEAP-LVL-----PLGGFTYGEKCIFLVNDWHAGLVPV-LLASKY----RPHGVYK--- 233 (576)
Q Consensus 171 ~~~~~~~~~r~---~~~~~~~~~~~-~~~-----~~~~~~~~~pDVvH~~~~~~~~~~~-~l~~~~----~~~~~~~--- 233 (576)
. .+...+.|+ .+++.++++.+ +++ .+..+. ++.+||+||.|++++.. +|+... ..+..+.
T Consensus 258 ~-~~~Gk~lRLkQeyfl~~aglqdiir~~~~~~~~l~~l~--~~~~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv 334 (794)
T TIGR02093 258 S-TYEGKELRLKQQYFFVSASLQDIIRRHLETHPDLSDFP--KKVAIQLNDTHPALAIPELMRLLIDEEGMDWDEAWDIT 334 (794)
T ss_pred C-ccchHHHHHHHHHHhhhhHHHHHHHHHHHhCCChhhCC--cceEEEecCCchHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 1 112268888 57777666643 222 111222 78999999999998744 333211 1111111
Q ss_pred CCcEEEEeecCCCCC--CCChhhhhhc-CCChhhhcccccccccccc-cccC-----------C--cCccchhHHHHHHh
Q 008154 234 DARSILVIHNLSHQG--VEPAATYKNL-GLPSEWYGALEWVFPTWAR-THAL-----------D--TGEAVNVLKGAIVT 296 (576)
Q Consensus 234 ~~~~v~t~H~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~-----------~--~~~~~~~~~~a~~~ 296 (576)
...++||+||+.+.+ .||.++++.+ +-........-..+....+ ..+. . ....++|..+|+..
T Consensus 335 ~~~~~yTnHT~lpealE~wp~~l~~~~Lpr~~~iI~~In~~fl~~~~~~~p~d~~~~~~~sii~~~~~~~v~Ma~LAi~~ 414 (794)
T TIGR02093 335 TKTFAYTNHTLLPEALEKWPVDLFQKLLPRHLEIIYEINRRFLAELAAKGPGDEAKIRRMSIIEEGQSKRVRMANLAIVG 414 (794)
T ss_pred HhheecccCCCChHHhCCcCHHHHHHHHhHHHHHHHHHhHHHHHHHHHhCCCcHHHHhheeeeecCCCCEEehHHHHHHh
Confidence 237899999997665 7888888543 2111110011111111111 1111 1 13369999999999
Q ss_pred ccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCC---CCCCccccccCCcCCcccch---------
Q 008154 297 ADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWN---PSSDEHIASHYSIDDLSGKV--------- 364 (576)
Q Consensus 297 ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~---~~~~~~l~~~~~~~~~~~~~--------- 364 (576)
|..|++||+.+.+.+++..+ +.....-+.++..++|||+...|. .+...++++.+.+++|..+.
T Consensus 415 S~~vNGVS~lH~eilk~~~~----~df~~l~P~kf~n~TNGVt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~ 490 (794)
T TIGR02093 415 SHSVNGVAALHTELLKEDLL----KDFYELYPEKFNNKTNGITPRRWLRLANPGLSALLTETIGDDWLTDLDLLKKLEPY 490 (794)
T ss_pred hhhhhhhHHHHHHHHHHHHH----HHHHhhCCCccCCcCCCCCccchhhhcCHHHHHHHHHhcCchhhhcHHHHHHHHhc
Confidence 99999999998876653322 223334567788999999999998 77778888888887775322
Q ss_pred -------------------HhHHHHHHHcCCCCCCCCCEEEEecccccccCHHH-HHHHHHhhhc----C-----CcEEE
Q 008154 365 -------------------QCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDL-IRLAAPEILA----D-----DIQFV 415 (576)
Q Consensus 365 -------------------~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~-ll~a~~~L~~----~-----~~~li 415 (576)
.....+++..|+..+++.+.++++.||..||+..+ ++..+.++.+ + |.+++
T Consensus 491 ~~D~~f~~~l~~vK~~nK~~L~~~i~~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~I 570 (794)
T TIGR02093 491 ADDSEFLEEFRQVKQANKQRLAAYIKEHTGVEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVI 570 (794)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEE
Confidence 12224445667777799999999999999999999 7777666543 2 77999
Q ss_pred EEeCCChhhHHHHHHHHH------H------hcC--ceEEEccCChhHHHHHHhcCCEEEeCCC--CCCCcHHHHHHHHc
Q 008154 416 MLGSGDPQFESWMRDTEA------T------YKD--KYRGWVGFNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRY 479 (576)
Q Consensus 416 i~G~g~~~~~~~~~~~~~------~------~~~--~~~~~~~~~~~~~~~ll~~~Dv~v~ps~--~E~~g~s~lEAma~ 479 (576)
|+|+++|.+...++.++. . ..+ +++++++|+..++..++++|||+.+.|+ .|++|++.|++|.+
T Consensus 571 FaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~lkVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMK~alN 650 (794)
T TIGR02093 571 FGGKAAPGYHMAKLIIKLINSVAEVVNNDPAVGDKLKVVFVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLN 650 (794)
T ss_pred EEecCCCCcHHHHHHHHHHHHHHHHhccChhhCCceeEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhc
Confidence 999998877666655543 1 223 7999999999999999999999999998 79999999999999
Q ss_pred CCceEEeCccccccccccccccccCCCCCcceeEeC
Q 008154 480 GTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFL 515 (576)
Q Consensus 480 G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~ 515 (576)
|.++++|.+|++.|+..+.+ ++|+|+|.
T Consensus 651 GaltlgtlDGanvEi~e~vG--------~eN~fiFG 678 (794)
T TIGR02093 651 GALTIGTLDGANVEIREEVG--------AENIFIFG 678 (794)
T ss_pred CcceeecccchhHHHHHHhC--------cccEEEcC
Confidence 99999999999999987522 46777773
No 60
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.97 E-value=1.9e-29 Score=258.92 Aligned_cols=353 Identities=19% Similarity=0.177 Sum_probs=243.1
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++.. .||..+++..++++|.+.||+|+++++...... ...
T Consensus 1 kIl~i~~~------~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~------------------------------~~~ 44 (359)
T cd03808 1 KILHIVTV------DGGLYSFRLPLIKALRAAGYEVHVVAPPGDELE------------------------------ELE 44 (359)
T ss_pred CeeEEEec------chhHHHHHHHHHHHHHhcCCeeEEEecCCCccc------------------------------ccc
Confidence 58889764 489999999999999999999999986532210 001
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhc
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 226 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~ 226 (576)
..++.++.++.... .. .....+ .......+.++.. +||+||+|...+.+...+.....
T Consensus 45 ~~~~~~~~~~~~~~--~~-----------~~~~~~-~~~~~~~~~~~~~--------~~dvv~~~~~~~~~~~~~~~~~~ 102 (359)
T cd03808 45 ALGVKVIPIPLDRR--GI-----------NPFKDL-KALLRLYRLLRKE--------RPDIVHTHTPKPGILGRLAARLA 102 (359)
T ss_pred cCCceEEecccccc--cc-----------ChHhHH-HHHHHHHHHHHhc--------CCCEEEEccccchhHHHHHHHHc
Confidence 13455555542210 00 001111 1112222332222 79999999876666555554422
Q ss_pred cCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCcc
Q 008154 227 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 306 (576)
Q Consensus 227 ~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~ 306 (576)
...+++++.|+......... ..... ...+++..++.+|.++++|+.
T Consensus 103 ------~~~~~i~~~~~~~~~~~~~~-------~~~~~---------------------~~~~~~~~~~~~d~ii~~s~~ 148 (359)
T cd03808 103 ------GVPKVIYTVHGLGFVFTSGG-------LKRRL---------------------YLLLERLALRFTDKVIFQNED 148 (359)
T ss_pred ------CCCCEEEEecCcchhhccch-------hHHHH---------------------HHHHHHHHHhhccEEEEcCHH
Confidence 45678888887532111000 00000 012456677899999999998
Q ss_pred chhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEE
Q 008154 307 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 386 (576)
Q Consensus 307 ~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~ 386 (576)
..+.+.+. .......++.+++||++...+.+.... .+ ++.+.++
T Consensus 149 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~--~~~~~i~ 192 (359)
T cd03808 149 DRDLALKL--------GIIKKKKTVLIPGSGVDLDRFSPSPEP--------------------------IP--EDDPVFL 192 (359)
T ss_pred HHHHHHHh--------cCCCcCceEEecCCCCChhhcCccccc--------------------------cC--CCCcEEE
Confidence 88766421 111124568889999998766543310 01 4678999
Q ss_pred EecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEeCC
Q 008154 387 FIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPS 464 (576)
Q Consensus 387 ~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps 464 (576)
++||+.+.||++.+++++..+.+ ++++|+|+|.++.........+........+.+.++.. .+..+++.||++++||
T Consensus 193 ~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~-~~~~~~~~adi~i~ps 271 (359)
T cd03808 193 FVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENPAAILEIEKLGLEGRVEFLGFRD-DVPELLAAADVFVLPS 271 (359)
T ss_pred EEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCcchhhHHHHHHhcCCcceEEEeeccc-cHHHHHHhccEEEecC
Confidence 99999999999999999999975 68999999999643222211133322223334555533 4568999999999999
Q ss_pred CCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHH
Q 008154 465 RFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLM 544 (576)
Q Consensus 465 ~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~ 544 (576)
..|++|++++|||++|+|+|+++.++..|.+.+ +.+|++++++|+++++++|.+++. +++.+.+++
T Consensus 272 ~~e~~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~----------~~~g~~~~~~~~~~~~~~i~~l~~----~~~~~~~~~ 337 (359)
T cd03808 272 YREGLPRVLLEAMAMGRPVIATDVPGCREAVID----------GVNGFLVPPGDAEALADAIERLIE----DPELRARMG 337 (359)
T ss_pred cccCcchHHHHHHHcCCCEEEecCCCchhhhhc----------CcceEEECCCCHHHHHHHHHHHHh----CHHHHHHHH
Confidence 999999999999999999999999999999987 789999999999999999999765 788888888
Q ss_pred HHH---HhhhCCHHHHHHHHH
Q 008154 545 RRG---MEKDYTWENAAIQYE 562 (576)
Q Consensus 545 ~~a---~~~~fs~~~~~~~y~ 562 (576)
+++ +.++|||+.++++|.
T Consensus 338 ~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 338 QAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHHHHHHhcCHHHHHHHhh
Confidence 877 467999999999886
No 61
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.97 E-value=6.1e-31 Score=283.02 Aligned_cols=420 Identities=15% Similarity=0.098 Sum_probs=279.5
Q ss_pred cccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccC------------------ceeEEEeecCC----
Q 008154 79 SKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDL------------------GCCMKICCFGG---- 136 (576)
Q Consensus 79 ~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~---- 136 (576)
...||+|+++.++.++++++|.+.+.+|..|..|.+.+.... .++. ...+.|.+.|+
T Consensus 104 LGnGGLGrLAacfldS~AtLglP~~G~GirY~yG~F~Q~i~~-G~Q~E~pd~Wl~~~~pwe~~r~~~~~~V~f~G~~~~~ 182 (797)
T cd04300 104 LGNGGLGRLAACFLDSLATLGLPGYGYGIRYEYGLFKQKIVD-GYQVELPDNWLRYGNPWEIRRPDVAVPVRFGGRVEHY 182 (797)
T ss_pred CCCCCcchhHHHHHHHHHhCCCCeEEEEecccCCCeEEEEEC-CEEEecCCCccCCCCCceEecCCcEEEEEECCEEEEe
Confidence 468999999999999999999999999999999965543321 1110 22233333332
Q ss_pred --------------------------------eeEEEEEEeeecCeE-EEEec---------CCCCCC--CCCCCCCCCC
Q 008154 137 --------------------------------EQEIAFFHEYREGVD-WVFVD---------HPSYHR--PGNPYGDING 172 (576)
Q Consensus 137 --------------------------------~~~~~~~~~~~~gv~-v~~l~---------~~~~~~--~~~~y~~~~~ 172 (576)
...+|+|....+... ++.+. +.+..+ +..+|++..
T Consensus 183 ~~~G~~~~~w~~~~~v~avpyDvpi~Gy~~~~~n~LRLW~a~~~~~~dl~~fn~gdy~~a~~~~~~~~~It~~LYp~Ds- 261 (797)
T cd04300 183 EDGGRLRVRWVDGETVLAVPYDTPIPGYGTNTVNTLRLWSAEASEEFDLDAFNRGDYIRAVEEKNRAENISKVLYPNDS- 261 (797)
T ss_pred ecCCcceeeecCcceEEeeecceeecCCCCCceEEEEEEEeeCCCCcCHHHhcCCchhhHHhhHHHhhhhhcccCCCCC-
Confidence 233344444433211 22220 111122 446888611
Q ss_pred CCCchHHHH---HHHHHHHHhhc-ccCCC--CCCCC-CCccEEEeCCCccchHHH-HHHhhc----cCCCCCC---CCcE
Q 008154 173 AFGDNQFRY---TLLCYAACEAP-LVLPL--GGFTY-GEKCIFLVNDWHAGLVPV-LLASKY----RPHGVYK---DARS 237 (576)
Q Consensus 173 ~~~~~~~r~---~~~~~~~~~~~-~~~~~--~~~~~-~~pDVvH~~~~~~~~~~~-~l~~~~----~~~~~~~---~~~~ 237 (576)
.+..++.|+ .+++.++++.+ +++.. ..+.. .++.+||+||.|++++.. +++... ..+..+. ...+
T Consensus 262 ~~~Gk~lRL~Qeyfl~sag~qdilr~~~~~~~~~~~l~~~~~ihlNDtHpalai~ElmR~L~d~~gl~w~~Aw~i~~~~~ 341 (797)
T cd04300 262 TEEGKELRLKQQYFFVSASLQDIIRRFKKTHGPLSEFPDKVAIQLNDTHPALAIPELMRILVDEEGLDWDEAWDITTKTF 341 (797)
T ss_pred chhHHHHHHHHHHHHhhhHHHHHHHHHHHhCCChhhCCCceEEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhe
Confidence 111277887 57777777664 33311 01111 168999999999998744 332211 1111112 2378
Q ss_pred EEEeecCCCCC--CCChhhhhhcCCChhhhc------------------ccccccccccccccCCcCccchhHHHHHHhc
Q 008154 238 ILVIHNLSHQG--VEPAATYKNLGLPSEWYG------------------ALEWVFPTWARTHALDTGEAVNVLKGAIVTA 297 (576)
Q Consensus 238 v~t~H~~~~~~--~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a 297 (576)
+||+||+.+.+ .||.++++.+-. +++. .....+.+++.-. ......++|..+|+..|
T Consensus 342 ~yTnHT~lpealE~wp~~l~~~~lp--r~~~II~~In~~~~~~~~~~~~~~~~~~~~l~ii~-~~~~~~v~Ma~LAi~~S 418 (797)
T cd04300 342 AYTNHTLLPEALEKWPVDLFERLLP--RHLEIIYEINRRFLEEVRAKYPGDEDRIRRMSIIE-EGGEKQVRMAHLAIVGS 418 (797)
T ss_pred eeecCCCchHHhCccCHHHHHHHCh--HHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhcccc-cCCCCEEehHHHHHhcC
Confidence 99999997665 788888854421 1111 0011111111111 11134699999999999
Q ss_pred cceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCC---CCCCccccccCCcCCcccchHhH-------
Q 008154 298 DRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWN---PSSDEHIASHYSIDDLSGKVQCK------- 367 (576)
Q Consensus 298 d~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~---~~~~~~l~~~~~~~~~~~~~~~~------- 367 (576)
..|++||+.+.+-+++.. +......-+.++..++|||+...|. .+...++++++.+++|..+....
T Consensus 419 ~~vNGVS~lH~ei~k~~~----~~df~~l~P~kf~n~TNGVt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~ 494 (797)
T cd04300 419 HSVNGVAALHSELLKETV----FKDFYELYPEKFNNKTNGITPRRWLLQANPGLSALITETIGDDWVTDLDQLKKLEPFA 494 (797)
T ss_pred cchhhhHHHHHHHHHHhh----HHHHHhhCCCccCCcCCCCCcchhhhhcCHHHHHHHHHhcCchhhhChHHHHHHHhcC
Confidence 999999998887664321 1223344567789999999999998 77778888888887775332211
Q ss_pred ---------------------HHHHHHcCCCCCCCCCEEEEecccccccCHHH-HHHHHHhhhc---------CCcEEEE
Q 008154 368 ---------------------IALQKELGLPIRPDCPLIGFIGRLDYQKGIDL-IRLAAPEILA---------DDIQFVM 416 (576)
Q Consensus 368 ---------------------~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~-ll~a~~~L~~---------~~~~lii 416 (576)
..+++..|+..+|+.+.++++.||..||+..+ ++..+.++.+ .|.++||
T Consensus 495 ~D~~f~~~l~~~K~~nK~~L~~~i~~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IF 574 (797)
T cd04300 495 DDPAFLKEFRAIKQANKERLAAYIKKTTGVEVDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIF 574 (797)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEE
Confidence 23344567766799999999999999999999 7777655433 2689999
Q ss_pred EeCCChhhHHHHHHHHH------H------hcC--ceEEEccCChhHHHHHHhcCCEEEeCCC--CCCCcHHHHHHHHcC
Q 008154 417 LGSGDPQFESWMRDTEA------T------YKD--KYRGWVGFNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYG 480 (576)
Q Consensus 417 ~G~g~~~~~~~~~~~~~------~------~~~--~~~~~~~~~~~~~~~ll~~~Dv~v~ps~--~E~~g~s~lEAma~G 480 (576)
+|+++|.+...++.++. . ..+ +++++++|+..++..++++|||+.+.|+ .|++|++.|++|.+|
T Consensus 575 aGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lkVVFlenY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNG 654 (797)
T cd04300 575 GGKAAPGYYMAKLIIKLINAVADVVNNDPDVGDKLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNG 654 (797)
T ss_pred eccCCCCcHHHHHHHHHHHHHHHHhccChhcCCceEEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcC
Confidence 99998877665555543 1 223 7999999999999999999999999998 799999999999999
Q ss_pred CceEEeCccccccccccccccccCCCCCcceeEeC
Q 008154 481 TIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFL 515 (576)
Q Consensus 481 ~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~ 515 (576)
.++++|.+|++.|+....+ ++|+|+|.
T Consensus 655 altlgtlDGanvEi~e~vG--------~eN~fiFG 681 (797)
T cd04300 655 ALTIGTLDGANVEIAEEVG--------EENIFIFG 681 (797)
T ss_pred ceeeecccchhHHHHHHhC--------cCcEEEeC
Confidence 9999999999999997632 46788873
No 62
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.97 E-value=1.7e-29 Score=257.96 Aligned_cols=341 Identities=19% Similarity=0.137 Sum_probs=233.9
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++....| .||.++++..++++|++.||+|.+++...... ..+. .
T Consensus 1 kI~i~~~~~~~---~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~----~~~~-------------------------~ 48 (348)
T cd03820 1 KILFVIPSLGN---AGGAERVLSNLANALAEKGHEVTIISLDKGEP----PFYE-------------------------L 48 (348)
T ss_pred CeEEEeccccC---CCChHHHHHHHHHHHHhCCCeEEEEecCCCCC----Cccc-------------------------c
Confidence 58999887554 69999999999999999999999998764320 0000 0
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhc
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 226 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~ 226 (576)
..++.+..++...... .+ ..........+.++. .+||+||+|++.. ..++....
T Consensus 49 ~~~~~~~~~~~~~~~~---~~------------~~~~~~~~~~~~l~~--------~~~d~i~~~~~~~---~~~~~~~~ 102 (348)
T cd03820 49 DPKIKVIDLGDKRDSK---LL------------ARFKKLRRLRKLLKN--------NKPDVVISFLTSL---LTFLASLG 102 (348)
T ss_pred CCccceeecccccccc---hh------------ccccchHHHHHhhcc--------cCCCEEEEcCchH---HHHHHHHh
Confidence 1233333332111000 00 000011112222221 2799999998761 12222211
Q ss_pred cCCCCCCC-CcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCc
Q 008154 227 RPHGVYKD-ARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 305 (576)
Q Consensus 227 ~~~~~~~~-~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~ 305 (576)
.+ +|++++.|+....... . .......+.+++.+|.++++|+
T Consensus 103 ------~~~~~~i~~~~~~~~~~~~-------------~-------------------~~~~~~~~~~~~~~d~ii~~s~ 144 (348)
T cd03820 103 ------LKIVKLIVSEHNSPDAYKK-------------R-------------------LRRLLLRRLLYRRADAVVVLTE 144 (348)
T ss_pred ------hccccEEEecCCCccchhh-------------h-------------------hHHHHHHHHHHhcCCEEEEeCH
Confidence 23 4899999975211000 0 0001135677899999999999
Q ss_pred cchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEE
Q 008154 306 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 385 (576)
Q Consensus 306 ~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i 385 (576)
..... .......++.++|||++...+.+.. + .+..++
T Consensus 145 ~~~~~------------~~~~~~~~~~vi~~~~~~~~~~~~~-----------------------------~--~~~~~i 181 (348)
T cd03820 145 EDRAL------------YYKKFNKNVVVIPNPLPFPPEEPSS-----------------------------D--LKSKRI 181 (348)
T ss_pred HHHHH------------hhccCCCCeEEecCCcChhhccccC-----------------------------C--CCCcEE
Confidence 87511 1234567899999999976554320 1 356899
Q ss_pred EEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEeC
Q 008154 386 GFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMP 463 (576)
Q Consensus 386 ~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~p 463 (576)
+++|++.+.||++.+++++..+.+ ++++|+|+|+++. .....+.+.+......+.+.++ .+.+..+++.||++++|
T Consensus 182 ~~~g~~~~~K~~~~l~~~~~~l~~~~~~~~l~i~G~~~~-~~~~~~~~~~~~~~~~v~~~g~-~~~~~~~~~~ad~~i~p 259 (348)
T cd03820 182 LAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIVGDGPE-REALEALIKELGLEDRVILLGF-TKNIEEYYAKASIFVLT 259 (348)
T ss_pred EEEEeeccccCHHHHHHHHHHHHhcCCCeEEEEEeCCCC-HHHHHHHHHHcCCCCeEEEcCC-cchHHHHHHhCCEEEeC
Confidence 999999999999999999999974 6899999999863 2333333333222233445555 34456899999999999
Q ss_pred CCCCCCcHHHHHHHHcCCceEEeCcc-ccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHH
Q 008154 464 SRFEPCGLNQLYAMRYGTIPVVHATG-GLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEG 542 (576)
Q Consensus 464 s~~E~~g~s~lEAma~G~pvIat~~g-g~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~ 542 (576)
|.+|++|++++|||++|+|||+++.+ +..+++.+ +.+|+++++.|+++++++|.+++. |++.+.+
T Consensus 260 s~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~----------~~~g~~~~~~~~~~~~~~i~~ll~----~~~~~~~ 325 (348)
T cd03820 260 SRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIED----------GVNGLLVPNGDVEALAEALLRLME----DEELRKR 325 (348)
T ss_pred ccccccCHHHHHHHHcCCCEEEecCCCchHhhhcc----------CcceEEeCCCCHHHHHHHHHHHHc----CHHHHHH
Confidence 99999999999999999999999875 45566665 569999999999999999999975 8888888
Q ss_pred HHHHH--HhhhCCHHHHHHHHH
Q 008154 543 LMRRG--MEKDYTWENAAIQYE 562 (576)
Q Consensus 543 ~~~~a--~~~~fs~~~~~~~y~ 562 (576)
+++++ +.++|+|++++++|.
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 326 MGANARESAERFSIENIIKQWE 347 (348)
T ss_pred HHHHHHHHHHHhCHHHHHHHhc
Confidence 88887 567899999999885
No 63
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=99.97 E-value=3.7e-29 Score=257.19 Aligned_cols=368 Identities=27% Similarity=0.335 Sum_probs=252.5
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++..++|. .||.+.++..++++|++.||+|.++++..........
T Consensus 1 kI~ii~~~~~~~--~~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~~----------------------------- 49 (374)
T cd03801 1 KILLVTPEYPPS--VGGAERHVLELARALAARGHEVTVLTPGDGGLPDEEE----------------------------- 49 (374)
T ss_pred CeeEEecccCCc--cCcHhHHHHHHHHHHHhcCceEEEEecCCCCCCceee-----------------------------
Confidence 699999987773 6999999999999999999999999976433211000
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhc
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 226 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~ 226 (576)
......... ..... .. ...............+... +||+||+|++........... .
T Consensus 50 ~~~~~~~~~--~~~~~---~~---------~~~~~~~~~~~~~~~~~~~--------~~Dii~~~~~~~~~~~~~~~~-~ 106 (374)
T cd03801 50 VGGIVVVRP--PPLLR---VR---------RLLLLLLLALRLRRLLRRE--------RFDVVHAHDWLALLAAALAAR-L 106 (374)
T ss_pred ecCcceecC--Ccccc---cc---------hhHHHHHHHHHHHHHhhhc--------CCcEEEEechhHHHHHHHHHH-h
Confidence 000000000 00000 00 0111111222222222222 799999998777665542222 2
Q ss_pred cCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCcc
Q 008154 227 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 306 (576)
Q Consensus 227 ~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~ 306 (576)
.++|++++.|+......... ..... .....+.+..++.+|.++++|+.
T Consensus 107 ------~~~~~i~~~h~~~~~~~~~~-----~~~~~---------------------~~~~~~~~~~~~~~d~~i~~s~~ 154 (374)
T cd03801 107 ------LGIPLVLTVHGLEFGRPGNE-----LGLLL---------------------KLARALERRALRRADRIIAVSEA 154 (374)
T ss_pred ------cCCcEEEEeccchhhccccc-----hhHHH---------------------HHHHHHHHHHHHhCCEEEEecHH
Confidence 57899999998743211100 00000 01123566778899999999998
Q ss_pred chhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEE
Q 008154 307 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 386 (576)
Q Consensus 307 ~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~ 386 (576)
..+.+.. .......++.++|||++...+.+.. . ..+.....+ .+.++++
T Consensus 155 ~~~~~~~---------~~~~~~~~~~~i~~~~~~~~~~~~~-~-------------------~~~~~~~~~--~~~~~i~ 203 (374)
T cd03801 155 TREELRE---------LGGVPPEKITVIPNGVDTERFRPAP-R-------------------AARRRLGIP--EDEPVIL 203 (374)
T ss_pred HHHHHHh---------cCCCCCCcEEEecCcccccccCccc-h-------------------HHHhhcCCc--CCCeEEE
Confidence 8877642 2233346899999999987765431 0 111222222 4678999
Q ss_pred EecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHH-HhcCceEEEccCChhHHHHHHhcCCEEEeC
Q 008154 387 FIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEA-TYKDKYRGWVGFNVPISHRITAGCDILLMP 463 (576)
Q Consensus 387 ~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~p 463 (576)
++|++...||++.+++++..+.+ ++++++++|.++ ......+.+.+ ....++......+.+....+++.||++++|
T Consensus 204 ~~g~~~~~k~~~~~i~~~~~~~~~~~~~~l~i~G~~~-~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i~~ 282 (374)
T cd03801 204 FVGRLVPRKGVDLLLEALAKLRKEYPDVRLVIVGDGP-LREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFVLP 282 (374)
T ss_pred EecchhhhcCHHHHHHHHHHHhhhcCCeEEEEEeCcH-HHHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhcCEEEec
Confidence 99999999999999999999876 489999999774 23333333322 233344443333556677899999999999
Q ss_pred CCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHH
Q 008154 464 SRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGL 543 (576)
Q Consensus 464 s~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~ 543 (576)
+..|++|++++|||++|+|+|+++.++..|.+.+ +.+|+.+++.|+++++++|.+++. +++.+.++
T Consensus 283 ~~~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~----------~~~g~~~~~~~~~~l~~~i~~~~~----~~~~~~~~ 348 (374)
T cd03801 283 SLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVED----------GETGLLVPPGDPEALAEAILRLLD----DPELRRRL 348 (374)
T ss_pred chhccccchHHHHHHcCCcEEEeCCCChhHHhcC----------CcceEEeCCCCHHHHHHHHHHHHc----ChHHHHHH
Confidence 9999999999999999999999999999999987 789999999999999999999875 77888888
Q ss_pred HHHH---HhhhCCHHHHHHHHHHHHH
Q 008154 544 MRRG---MEKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 544 ~~~a---~~~~fs~~~~~~~y~~~y~ 566 (576)
++++ ..+.|+|+++++++.++|+
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (374)
T cd03801 349 GEAARERVAERFSWDRVAARTEEVYY 374 (374)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHhhC
Confidence 8876 4679999999999998873
No 64
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.97 E-value=4.9e-29 Score=262.42 Aligned_cols=370 Identities=12% Similarity=0.024 Sum_probs=234.8
Q ss_pred CceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEE
Q 008154 65 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFH 144 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (576)
..||++++. + -+|....+.++|++|+++||+|++|+...+... .. .
T Consensus 3 ~~~~~~~~~---~---~~~~~~R~~~~a~~L~~~G~~V~ii~~~~~~~~-----~~-----------------------~ 48 (415)
T cd03816 3 RKRVCVLVL---G---DIGRSPRMQYHALSLAKHGWKVDLVGYLETPPH-----DE-----------------------I 48 (415)
T ss_pred ccEEEEEEe---c---ccCCCHHHHHHHHHHHhcCceEEEEEecCCCCC-----HH-----------------------H
Confidence 456888875 3 255666778899999999999999986532210 00 0
Q ss_pred eeecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHH-HH---HHHHHhhcccCCCCCCCCCCccEEEeCCCccc--hH
Q 008154 145 EYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYT-LL---CYAACEAPLVLPLGGFTYGEKCIFLVNDWHAG--LV 218 (576)
Q Consensus 145 ~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~-~~---~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~--~~ 218 (576)
....|+.++.+..+.... .. .....++. .+ .......+.. ..+||+||+|..... ..
T Consensus 49 ~~~~~v~~~~~~~~~~~~----~~------~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~Dvi~~~~~~~~~~~~ 111 (415)
T cd03816 49 LSNPNITIHPLPPPPQRL----NK------LPFLLFAPLKVLWQFFSLLWLLYK-------LRPADYILIQNPPSIPTLL 111 (415)
T ss_pred hcCCCEEEEECCCCcccc----cc------chHHHHHHHHHHHHHHHHHHHHHh-------cCCCCEEEEeCCCCchHHH
Confidence 112567777775332000 00 01111111 11 1111111111 117999999874432 22
Q ss_pred HHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCC-hhhhcccccccccccccccCCcCccchhHHHHHHhc
Q 008154 219 PVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLP-SEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTA 297 (576)
Q Consensus 219 ~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a 297 (576)
...+..+. .++|+|+|.|+..+. .. .++.. ...+... ...+++...+.|
T Consensus 112 ~a~~~~~~------~~~~~V~~~h~~~~~------~~-~~~~~~~~~~~~~-----------------~~~~e~~~~~~a 161 (415)
T cd03816 112 IAWLYCLL------RRTKLIIDWHNYGYT------IL-ALKLGENHPLVRL-----------------AKWYEKLFGRLA 161 (415)
T ss_pred HHHHHHHH------hCCeEEEEcCCchHH------HH-hcccCCCCHHHHH-----------------HHHHHHHHhhcC
Confidence 22222222 468999999975210 00 01100 0000000 012566677899
Q ss_pred cceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHH-----
Q 008154 298 DRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQK----- 372 (576)
Q Consensus 298 d~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----- 372 (576)
|.++++|+.+.+.+. + ...+..++.+||||.+ ..|.|..... ....+.+
T Consensus 162 d~ii~vS~~~~~~l~---------~-~~~~~~ki~vI~Ng~~-~~f~p~~~~~---------------~~~~~~~~~~~~ 215 (415)
T cd03816 162 DYNLCVTKAMKEDLQ---------Q-FNNWKIRATVLYDRPP-EQFRPLPLEE---------------KHELFLKLAKTF 215 (415)
T ss_pred CEeeecCHHHHHHHH---------h-hhccCCCeeecCCCCH-HHceeCcHHH---------------HHHHHHhccccc
Confidence 999999999888763 1 2456788999999954 4555443210 0111111
Q ss_pred --------HcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--------CCcEEEEEeCCChhhHHHHHHHHHHhc
Q 008154 373 --------ELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--------DDIQFVMLGSGDPQFESWMRDTEATYK 436 (576)
Q Consensus 373 --------~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--------~~~~lii~G~g~~~~~~~~~~~~~~~~ 436 (576)
..++.. ++..+++++||+.+.||++.+++|++.+.+ ++++|+|+|+|+ ..++..+.+++...
T Consensus 216 ~~~~~~~~~~~~~~-~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~-~~~~l~~~~~~~~l 293 (415)
T cd03816 216 LTRELRIGAVQLSE-ERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKGP-LKEKYLERIKELKL 293 (415)
T ss_pred cccccccccceecC-CCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEecCc-cHHHHHHHHHHcCC
Confidence 112221 345678889999999999999999999863 369999999995 34555555544333
Q ss_pred CceEEEccC-ChhHHHHHHhcCCEEEeCCC---CCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCccee
Q 008154 437 DKYRGWVGF-NVPISHRITAGCDILLMPSR---FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGW 512 (576)
Q Consensus 437 ~~~~~~~~~-~~~~~~~ll~~~Dv~v~ps~---~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~ 512 (576)
.+++++.++ +.+....+|+.||+++.|+. .|++|++++||||||+|||+++.|+..|++.+ +.+|+
T Consensus 294 ~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~----------~~~G~ 363 (415)
T cd03816 294 KKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKH----------GENGL 363 (415)
T ss_pred CcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcC----------CCCEE
Confidence 456666664 55667789999999997533 47899999999999999999999999999998 89999
Q ss_pred EeCCCCHHHHHHHHHHHHHHhhhC---HHHHHHHHHHHHh-hhCCHHHHHH
Q 008154 513 SFLPLSEESMLTALRFAIRTYREH---KSSWEGLMRRGME-KDYTWENAAI 559 (576)
Q Consensus 513 ~~~~~d~~~la~~i~~~l~~~~~~---~~~~~~~~~~a~~-~~fs~~~~~~ 559 (576)
+++ |+++++++|.+++. | ++.+.+|++++.+ ..++|++-.+
T Consensus 364 lv~--d~~~la~~i~~ll~----~~~~~~~~~~m~~~~~~~~~~~~~~~~~ 408 (415)
T cd03816 364 VFG--DSEELAEQLIDLLS----NFPNRGKLNSLKKGAQEESELRWDENWD 408 (415)
T ss_pred EEC--CHHHHHHHHHHHHh----cCCCHHHHHHHHHHHHHhhhcCHHHHHH
Confidence 994 89999999999876 6 8888999888742 3566655433
No 65
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=99.97 E-value=3.9e-31 Score=256.42 Aligned_cols=240 Identities=36% Similarity=0.572 Sum_probs=175.0
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccC----ceeEEEeecCCeeEEEE
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDL----GCCMKICCFGGEQEIAF 142 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 142 (576)
||+++|+|+.|+.++||++.++..|+++|+++||+|.||+|.|+.............+. ...+.+.. ...+++
T Consensus 1 kIl~vt~E~~P~~k~GGLgdv~~~L~kaL~~~G~~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~v 77 (245)
T PF08323_consen 1 KILMVTSEYAPFAKVGGLGDVVGSLPKALAKQGHDVRVIMPKYGFIDEEYFQLEPVRRLSVPFGGPVPVGV---WYEVRV 77 (245)
T ss_dssp EEEEE-S-BTTTB-SSHHHHHHHHHHHHHHHTT-EEEEEEE-THHHHHHCTTEEEEEEES-STTCEEEEE-------EEE
T ss_pred CEEEEEcccCcccccCcHhHHHHHHHHHHHhcCCeEEEEEccchhhhhhhhcceEEEEecccccccccccc---ceEEEE
Confidence 69999999999999999999999999999999999999999985432111000000000 00122222 267788
Q ss_pred EEeeecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHH
Q 008154 143 FHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLL 222 (576)
Q Consensus 143 ~~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l 222 (576)
++...+|+++|+++++.+..+..+|++..++|.|+..||++|++++.+++..++. +||||||||||++++|.++
T Consensus 78 ~~~~~~~v~v~~i~~~~~f~r~~iY~~~~~~~~d~~~rf~~fs~a~le~~~~l~~------~pDIIH~hDW~tal~p~~l 151 (245)
T PF08323_consen 78 YRYPVDGVPVYFIDNPEYFDRPGIYGDNGGDYPDNAERFAFFSRAALELLKKLGW------KPDIIHCHDWHTALAPLYL 151 (245)
T ss_dssp EEEEETTEEEEEEESHHHHGSSSSSBSTSSBHTTHHHHHHHHHHHHHHHHCTCT-------S-SEEEEECGGGTTHHHHH
T ss_pred EEEEcCCccEEEecChhhccccceeccCCCcchhHHHHHHHHHHHHHHHHHhhCC------CCCEEEecCchHHHHHHHh
Confidence 9999999999999988866666699987778899999999999999999887643 8999999999999999999
Q ss_pred HhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceec
Q 008154 223 ASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLT 302 (576)
Q Consensus 223 ~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~ 302 (576)
+......+...++|+|+|+|+..+++.++.+.+..+|++...+... ....+.+.+|+++.++..||.|++
T Consensus 152 k~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~----------~~~~~~~~in~lk~gi~~AD~v~T 221 (245)
T PF08323_consen 152 KERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNL----------DEYEFYGQINFLKAGIVYADKVTT 221 (245)
T ss_dssp HHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-ST----------TTTEETTEEEHHHHHHHHSSEEEE
T ss_pred ccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccc----------cccccccccCHHHHHHHhcCEeee
Confidence 9876544444579999999999999999888777788775443211 122336678999999999999999
Q ss_pred cCccchhhhccccCCcchhhhhh
Q 008154 303 VSKGYSWEITTVEGGYGLHEILS 325 (576)
Q Consensus 303 vS~~~~~~~~~~~~~~~l~~~~~ 325 (576)
||+.+++++.+..++.||++.+.
T Consensus 222 VS~~Ya~Ei~~~~~g~GL~~~l~ 244 (245)
T PF08323_consen 222 VSPTYAREIQTPEFGEGLEGLLR 244 (245)
T ss_dssp SSHHHHHHTTSHHHHTT-HHHHH
T ss_pred CCHHHHHHHhCcccCCChHHHhc
Confidence 99999999999888888887654
No 66
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.97 E-value=4.5e-28 Score=249.89 Aligned_cols=371 Identities=22% Similarity=0.251 Sum_probs=246.0
Q ss_pred EEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEeee
Q 008154 68 IVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYR 147 (576)
Q Consensus 68 I~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (576)
|++++..++| ...||.++++..++++|++.||+|+++++.......... .. . .. .
T Consensus 1 iLii~~~~p~-~~~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~~~~~~~-~~-~---~~-------------------~ 55 (377)
T cd03798 1 ILVISSLYPP-PNNGGGGIFVKELARALAKRGVEVTVLAPGPWGPKLLDL-LK-G---RL-------------------V 55 (377)
T ss_pred CeEeccCCCC-CCCchHHHHHHHHHHHHHHCCCceEEEecCCCCCCchhh-cc-c---cc-------------------c
Confidence 5777776555 235999999999999999999999999875332211000 00 0 00 0
Q ss_pred cCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhcc
Q 008154 148 EGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYR 227 (576)
Q Consensus 148 ~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~~ 227 (576)
......... ... ... ........+.......+... ..+||+||+|.............+.
T Consensus 56 ~~~~~~~~~---~~~---~~~-------~~~~~~~~~~~~~~~~l~~~------~~~~dii~~~~~~~~~~~~~~~~~~- 115 (377)
T cd03798 56 GVERLPVLL---PVV---PLL-------KGPLLYLLAARALLKLLKLK------RFRPDLIHAHFAYPDGFAAALLKRK- 115 (377)
T ss_pred cccccccCc---chh---hcc-------ccchhHHHHHHHHHHHHhcc------cCCCCEEEEeccchHHHHHHHHHHh-
Confidence 000000000 000 000 00111122223333333200 1279999999544333222222222
Q ss_pred CCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCccc
Q 008154 228 PHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGY 307 (576)
Q Consensus 228 ~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~~ 307 (576)
.++|++++.|+......... .. ...+++..++.+|.++++|+..
T Consensus 116 -----~~~~~i~~~h~~~~~~~~~~----------~~---------------------~~~~~~~~~~~~d~ii~~s~~~ 159 (377)
T cd03798 116 -----LGIPLVVTLHGSDVNLLPRK----------RL---------------------LRALLRRALRRADAVIAVSEAL 159 (377)
T ss_pred -----cCCCEEEEeecchhcccCch----------hh---------------------HHHHHHHHHhcCCeEEeCCHHH
Confidence 46899999998632211000 00 1235667788999999999988
Q ss_pred hhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEEE
Q 008154 308 SWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGF 387 (576)
Q Consensus 308 ~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~ 387 (576)
.+.+.+ .. ....++.+++||+|...+.+.... .. ...+.. .+.+++++
T Consensus 160 ~~~~~~---------~~-~~~~~~~~i~~~~~~~~~~~~~~~------------------~~--~~~~~~--~~~~~i~~ 207 (377)
T cd03798 160 ADELKA---------LG-IDPEKVTVIPNGVDTERFSPADRA------------------EA--RKLGLP--EDKKVILF 207 (377)
T ss_pred HHHHHH---------hc-CCCCceEEcCCCcCcccCCCcchH------------------HH--HhccCC--CCceEEEE
Confidence 876531 11 356789999999998877654421 11 222323 46789999
Q ss_pred ecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHH-hcCceEEEccCChhHHHHHHhcCCEEEeCC
Q 008154 388 IGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEAT-YKDKYRGWVGFNVPISHRITAGCDILLMPS 464 (576)
Q Consensus 388 ~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps 464 (576)
+|++.+.||++.+++++..+.+ ++++++++|.++. .....+.+... ...++......+.+....+++.||++++|+
T Consensus 208 ~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~~-~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~~~ 286 (377)
T cd03798 208 VGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPL-REALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADVFVLPS 286 (377)
T ss_pred eccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCcc-hHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhcCeeecch
Confidence 9999999999999999999976 4899999999853 23333333321 233444443346666778999999999999
Q ss_pred CCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHH
Q 008154 465 RFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLM 544 (576)
Q Consensus 465 ~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~ 544 (576)
..|++|++++|||++|+|+|+++.|+..|.+.+ +.+|+.+++.|+++++++|.+++. +++. +++
T Consensus 287 ~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~----------~~~g~~~~~~~~~~l~~~i~~~~~----~~~~--~~~ 350 (377)
T cd03798 287 LREGFGLVLLEAMACGLPVVATDVGGIPEIITD----------GENGLLVPPGDPEALAEAILRLLA----DPWL--RLG 350 (377)
T ss_pred hhccCChHHHHHHhcCCCEEEecCCChHHHhcC----------CcceeEECCCCHHHHHHHHHHHhc----CcHH--HHh
Confidence 999999999999999999999999999999988 788999999999999999999986 4443 333
Q ss_pred HHH---HhhhCCHHHHHHHHHHHHHHh
Q 008154 545 RRG---MEKDYTWENAAIQYEQVFEWA 568 (576)
Q Consensus 545 ~~a---~~~~fs~~~~~~~y~~~y~~~ 568 (576)
+++ +.++|+|+.+++++.++|+++
T Consensus 351 ~~~~~~~~~~~s~~~~~~~~~~~~~~l 377 (377)
T cd03798 351 RAARRRVAERFSWENVAERLLELYREV 377 (377)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhhC
Confidence 333 567999999999999998753
No 67
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.97 E-value=2.3e-28 Score=256.35 Aligned_cols=375 Identities=13% Similarity=0.114 Sum_probs=223.3
Q ss_pred CCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhC-CCcEEEEEecCCCCCCcccchhccccCceeEEEeec-CCeeEE
Q 008154 63 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR-GHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCF-GGEQEI 140 (576)
Q Consensus 63 ~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~-G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 140 (576)
+++.+|++|+.-.+|+- .|..+--.-.|..|++. |++|+.|.|=-.. ......|.....+ ..| .+..++
T Consensus 320 ~~~r~~~ivTtAslPWm--TGtavnpL~rAayLa~~~~~~VtlviPWl~~-~dq~~vy~~~~~F------~~p~eQe~~i 390 (794)
T PLN02501 320 DGKRHVAIVTTASLPWM--TGTAVNPLFRAAYLAKSAKQNVTLLVPWLCK-SDQELVYPNNLTF------SSPEEQESYI 390 (794)
T ss_pred cCCCeEEEEEcccCccc--ccccccHHHHHHHhcccCCceEEEEEecCCc-cccccccCCCccc------CCHHHHHHHH
Confidence 34578999999999983 66666666667778887 6999999873221 1111111110000 000 011111
Q ss_pred EEEEee-e---cCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCC-Ccc
Q 008154 141 AFFHEY-R---EGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVND-WHA 215 (576)
Q Consensus 141 ~~~~~~-~---~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~-~~~ 215 (576)
+-|-.. + .+..+.+.+.. |.. ..+-++-...+.+.+... +|||||+++ .+.
T Consensus 391 r~wl~~r~g~~~~~~i~fYpg~-~~~---------------~~~SI~p~gdI~~~L~~f--------~PDVVHLatP~~L 446 (794)
T PLN02501 391 RNWLEERIGFKADFKISFYPGK-FSK---------------ERRSIIPAGDTSQFIPSK--------DADIAILEEPEHL 446 (794)
T ss_pred HHHHHHhcCCCCCceEEeecch-hcc---------------CCccccchHHHHHHhhcc--------CCCEEEECCchhh
Confidence 111111 0 12222222211 111 011111222333333222 899999997 344
Q ss_pred chH--HHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCC--hhhhcccccccccccccccCCcCccchhHH
Q 008154 216 GLV--PVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLP--SEWYGALEWVFPTWARTHALDTGEAVNVLK 291 (576)
Q Consensus 216 ~~~--~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (576)
++. +...+.+ .+ |+|.++||.. +. .+.+.+.. ........+ .+.+
T Consensus 447 Gw~~~Glr~ArK-------l~-PVVasyHTny-----~e-Yl~~y~~g~L~~~llk~l~-----------------~~v~ 495 (794)
T PLN02501 447 NWYHHGKRWTDK-------FN-HVVGVVHTNY-----LE-YIKREKNGALQAFFVKHIN-----------------NWVT 495 (794)
T ss_pred ccHHHHHHHHHH-------cC-CeEEEEeCCc-----HH-HHhHhcchhHHHHHHHHHH-----------------HHHH
Confidence 444 3334443 34 7999999862 21 22222211 111000000 1111
Q ss_pred HHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHH
Q 008154 292 GAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQ 371 (576)
Q Consensus 292 ~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 371 (576)
.+ +||.++++|..+. .+ +...+ ...||||+..|.|.... ..+
T Consensus 496 r~--hcD~VIaPS~atq-~L---------------~~~vI-~nVnGVDte~F~P~~r~-------------------~~~ 537 (794)
T PLN02501 496 RA--YCHKVLRLSAATQ-DL---------------PKSVI-CNVHGVNPKFLKIGEKV-------------------AEE 537 (794)
T ss_pred Hh--hCCEEEcCCHHHH-Hh---------------cccce-eecccccccccCCcchh-------------------HHH
Confidence 11 2899999997554 21 12222 22269999988876532 122
Q ss_pred HHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhH
Q 008154 372 KELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPI 449 (576)
Q Consensus 372 ~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (576)
+.++++ .....++|+||+.+.||++.|++|+..+.. ++++|+|+|+|+ ..++..+.+ .....++ .+.+..+.
T Consensus 538 r~lgi~--~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP-~reeLe~la-~eLgL~V-~FLG~~dd- 611 (794)
T PLN02501 538 RELGQQ--AFSKGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGE-DAHEVQRAA-KRLDLNL-NFLKGRDH- 611 (794)
T ss_pred HhcCCc--cccCceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCc-cHHHHHHHH-HHcCCEE-EecCCCCC-
Confidence 455654 223458999999999999999999998865 489999999996 334444433 3344344 45555433
Q ss_pred HHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHH
Q 008154 450 SHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFA 529 (576)
Q Consensus 450 ~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~ 529 (576)
...+|+.+|+||+||.+|++|++++||||||+|||+++.+|. +.+.+ +.+|+.+ +|+++++++|.++
T Consensus 612 ~~~lyasaDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~----------g~nGll~--~D~EafAeAI~~L 678 (794)
T PLN02501 612 ADDSLHGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRS----------FPNCLTY--KTSEDFVAKVKEA 678 (794)
T ss_pred HHHHHHhCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEee----------cCCeEec--CCHHHHHHHHHHH
Confidence 336999999999999999999999999999999999999985 44655 6788765 6899999999999
Q ss_pred HHHhhhCHHHHHHHHHHHHhhhCCHHHHHHHHHHHH
Q 008154 530 IRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVF 565 (576)
Q Consensus 530 l~~~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y 565 (576)
+. ++.....+.. ...+||+.+++++++.-
T Consensus 679 Ls----d~~~rl~~~a---~~~~SWeAaadrLle~~ 707 (794)
T PLN02501 679 LA----NEPQPLTPEQ---RYNLSWEAATQRFMEYS 707 (794)
T ss_pred Hh----CchhhhHHHH---HhhCCHHHHHHHHHHhh
Confidence 86 3333222222 34899999999998765
No 68
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.96 E-value=1.6e-27 Score=243.63 Aligned_cols=340 Identities=22% Similarity=0.214 Sum_probs=225.3
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++..+. .||.++++..++++|.+.||+|.+++.......... ... .
T Consensus 1 kIl~~~~~~~----~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~~~~~~--~~~------------------------~ 50 (353)
T cd03811 1 KILFVIPSLG----GGGAERVLLNLANGLDKRGYDVTLVVLRDEGDYLEL--LPS------------------------N 50 (353)
T ss_pred CeEEEeeccc----CCCcchhHHHHHHHHHhcCceEEEEEcCCCCccccc--ccc------------------------c
Confidence 5889987642 599999999999999999999999987643321100 000 0
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCC-ccchHHHHHHhh
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDW-HAGLVPVLLASK 225 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~-~~~~~~~~l~~~ 225 (576)
............ .+. .........+.++.. +||+||+|.. ...+...+.. +
T Consensus 51 ~~~~~~~~~~~~-------~~~------------~~~~~~~~~~~~~~~--------~~dii~~~~~~~~~~~~~~~~-~ 102 (353)
T cd03811 51 VKLIPVRVLKLK-------SLR------------DLLAILRLRRLLRKE--------KPDVVISHLTTTPNVLALLAA-R 102 (353)
T ss_pred hhhhceeeeecc-------ccc------------chhHHHHHHHHHHhc--------CCCEEEEcCccchhHHHHHHh-h
Confidence 000000000000 000 001112222222222 7999999987 3333332222 1
Q ss_pred ccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCc
Q 008154 226 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 305 (576)
Q Consensus 226 ~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~ 305 (576)
.++|++++.|+......... ... ....+..++.+|.++++|+
T Consensus 103 -------~~~~~i~~~~~~~~~~~~~~---------~~~----------------------~~~~~~~~~~~d~ii~~s~ 144 (353)
T cd03811 103 -------LGTKLIVWEHNSLSLELKRK---------LRL----------------------LLLIRKLYRRADKIVAVSE 144 (353)
T ss_pred -------cCCceEEEEcCcchhhhccc---------hhH----------------------HHHHHhhccccceEEEecc
Confidence 25899999998632110000 000 0245667789999999999
Q ss_pred cchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEE
Q 008154 306 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 385 (576)
Q Consensus 306 ~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i 385 (576)
...+.+. ..+..+..++.+||||++...+.+.... .. ..+.+ .+..++
T Consensus 145 ~~~~~~~---------~~~~~~~~~~~vi~~~~~~~~~~~~~~~------------------~~---~~~~~--~~~~~i 192 (353)
T cd03811 145 GVKEDLL---------KLLGIPPDKIEVIYNPIDIEEIRALAEE------------------PL---ELGIP--PDGPVI 192 (353)
T ss_pred chhhhHH---------HhhcCCccccEEecCCcChhhcCcccch------------------hh---hcCCC--CCceEE
Confidence 9887763 2333345789999999998777654321 00 12222 467899
Q ss_pred EEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEeC
Q 008154 386 GFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMP 463 (576)
Q Consensus 386 ~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~p 463 (576)
+++||+.+.||++.+++++..+.+ ++++|+++|.++. .....+.+........+.+.++..+ ...+++.||++|+|
T Consensus 193 ~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~~-~~~~~~~~~~~~~~~~v~~~g~~~~-~~~~~~~~d~~i~p 270 (353)
T cd03811 193 LAVGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDGPL-REELEALAKELGLADRVHFLGFQSN-PYPYLKAADLFVLS 270 (353)
T ss_pred EEEecchhhcChHHHHHHHHHhhhcCCCceEEEEcCCcc-HHHHHHHHHhcCCCccEEEecccCC-HHHHHHhCCEEEeC
Confidence 999999999999999999999976 4899999999853 3333344433222233345555444 45799999999999
Q ss_pred CCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHH
Q 008154 464 SRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGL 543 (576)
Q Consensus 464 s~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~ 543 (576)
|.+|++|++++|||++|+|+|+++.|+..|.+.+ +.+|+++++.|++++++.+..+. ...++++.+.++
T Consensus 271 s~~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~----------~~~g~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~ 339 (353)
T cd03811 271 SRYEGFPNVLLEAMALGTPVVATDCPGPREILED----------GENGLLVPVGDEAALAAAALALL-DLLLDPELRERL 339 (353)
T ss_pred cccCCCCcHHHHHHHhCCCEEEcCCCChHHHhcC----------CCceEEECCCCHHHHHHHHHHHH-hccCChHHHHHH
Confidence 9999999999999999999999999999999998 89999999999998865444443 334577777777
Q ss_pred HHHH
Q 008154 544 MRRG 547 (576)
Q Consensus 544 ~~~a 547 (576)
++++
T Consensus 340 ~~~~ 343 (353)
T cd03811 340 AAAA 343 (353)
T ss_pred HHHH
Confidence 7744
No 69
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=99.96 E-value=1.8e-28 Score=259.98 Aligned_cols=421 Identities=16% Similarity=0.143 Sum_probs=240.0
Q ss_pred cccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccC------------------ceeEEEeecCCee--
Q 008154 79 SKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDL------------------GCCMKICCFGGEQ-- 138 (576)
Q Consensus 79 ~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~-- 138 (576)
...||+|+++..+..+|+.+|.+....+..|..|-+.+... +..+. ...+.|.+.|+..
T Consensus 21 LGNGGLGRLAacfldSlAtl~~p~~GygirY~yG~F~Q~i~-dG~QvE~pd~Wl~~g~pWe~~r~~~~~~V~f~G~v~~~ 99 (713)
T PF00343_consen 21 LGNGGLGRLAACFLDSLATLGIPAYGYGIRYEYGLFKQKIV-DGWQVELPDNWLRYGNPWEIRRPDESYEVKFGGRVEDD 99 (713)
T ss_dssp ESSSHHHHHHHHHHHHHHHTT-EEEEEEE--SCESEEEEEE-TTEEEEEEEBTTTTG-TTSEEEGGGEEEEEESEEEE-E
T ss_pred ccCcccchhHHHHHHHHHhCCCCceEEEeeecCCCceeEee-cCCcccCCCCccCCCCceEEecCCceEEEeccceEEec
Confidence 45799999999999999999999999999998875433221 11110 2234444432211
Q ss_pred -------------EEEEEEeeec-----CeEEEEec---C-CCCC-----C----------------CCCCCCCCCCCCC
Q 008154 139 -------------EIAFFHEYRE-----GVDWVFVD---H-PSYH-----R----------------PGNPYGDINGAFG 175 (576)
Q Consensus 139 -------------~~~~~~~~~~-----gv~v~~l~---~-~~~~-----~----------------~~~~y~~~~~~~~ 175 (576)
..-.+..-|. .+...++. . ..|+ + +.-+|+.- ..+.
T Consensus 100 ~~~~~~~~~~~~v~av~yD~pi~Gy~~~~vn~LRLw~a~~~~~fd~~~fn~gdy~~a~~~~~~~e~is~vLYP~d-~~~~ 178 (713)
T PF00343_consen 100 GGRKVRWEDGETVLAVPYDMPIPGYRTKTVNTLRLWSAEPSEEFDLESFNRGDYIKAVEEKNRAENISKVLYPND-STEE 178 (713)
T ss_dssp ETTEEEEESCEEEEEEEEEEEEE-SSSS-EEEEEEEEEEESSSTTHHHHHTTCHHHHHHHHHHHHGGGTBSS-SS-SSHH
T ss_pred CCCcccccCCeEEEEEecCceeecCCCCceEEEEEeccCCCcccChhhcCCCcHHHHHHHHHHhhceeeecCCCC-cccc
Confidence 1111111111 13344433 0 0010 0 12245431 1122
Q ss_pred chHHHH---HHHHHHHHh-hcccC---C--CCCCCCCCccEEEeCCCccchHHHHHHh-----hccCCCCCCC---CcEE
Q 008154 176 DNQFRY---TLLCYAACE-APLVL---P--LGGFTYGEKCIFLVNDWHAGLVPVLLAS-----KYRPHGVYKD---ARSI 238 (576)
Q Consensus 176 ~~~~r~---~~~~~~~~~-~~~~~---~--~~~~~~~~pDVvH~~~~~~~~~~~~l~~-----~~~~~~~~~~---~~~v 238 (576)
.++.|+ .+++.+.++ ++++. + +..|. ++.+||+||.|++++..-+.+ ....+..+.. ..++
T Consensus 179 Gk~LRLkQqyf~vsa~lqdiir~~~~~~~~~~~~~--~~~~ihlNdtHpa~ai~ElmR~L~de~gl~~~eA~eiv~~~~~ 256 (713)
T PF00343_consen 179 GKELRLKQQYFFVSASLQDIIRRFKKSHGDLREFP--DKVVIHLNDTHPAFAIPELMRILMDEEGLSWDEAWEIVRKTFA 256 (713)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGHH--HHEEEEEESSTTTTHHHHHHHHHHHTT---HHHHHHHHHHHEE
T ss_pred chhhhhhhHhhhhhhHHHHHHHHHHHhCCChHHCC--cceEEeecCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHhcee
Confidence 335666 233333322 22222 1 22222 467999999999987433222 2222222222 2789
Q ss_pred EEeecCCCCC--CCChhhhhh-cCC--------Chhhhccccccc----ccccccc--cCCcCccchhHHHHHHhcccee
Q 008154 239 LVIHNLSHQG--VEPAATYKN-LGL--------PSEWYGALEWVF----PTWARTH--ALDTGEAVNVLKGAIVTADRLL 301 (576)
Q Consensus 239 ~t~H~~~~~~--~~~~~~~~~-~~~--------~~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~a~~~ad~v~ 301 (576)
||+||+.+.+ .||.++++. ++. ..+++......+ ..+.+.. .......++|..+|++.|..++
T Consensus 257 fTnHT~vpealE~wp~~l~~~~Lpr~~~ii~ein~~f~~~~~~~~~~d~~~~~~l~ii~~~~~~~~~Ma~LAl~~S~~vN 336 (713)
T PF00343_consen 257 FTNHTPVPEALEKWPVDLFERYLPRHLEIIYEINRRFLDELRRKYPGDEDQIRRLSIIEEGNSKRFRMANLALRGSHSVN 336 (713)
T ss_dssp EEE--SSGGGS-EEEHHHHHHHSHHHHHHHHHHHHHHHHHHHHHSTT-HHHHHHHSSEETSSSCEEEHHHHHHHCESEEE
T ss_pred eeccccccccccccCHHHHHHHChHHHHHHHHHhHHHHHHHHHHhcCcchhhhhcccccccchhhcchhHHHHHhccccc
Confidence 9999998776 788888743 211 011111110000 0111111 1123457999999999999999
Q ss_pred ccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCC---CCccccccCCcCCcccch--------------
Q 008154 302 TVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPS---SDEHIASHYSIDDLSGKV-------------- 364 (576)
Q Consensus 302 ~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~---~~~~l~~~~~~~~~~~~~-------------- 364 (576)
+||+.+.+-+++.. +.......+.++..|+|||+...|... ...++++++.+.+|..+.
T Consensus 337 GVS~LH~ev~k~~~----f~~f~~l~P~kf~nvTNGVh~rrWl~~~nP~L~~L~~~~iG~~W~~d~~~l~~l~~~~dd~~ 412 (713)
T PF00343_consen 337 GVSKLHGEVLKQMV----FKDFYELWPEKFGNVTNGVHPRRWLSQANPELSELITEYIGDDWRTDLEQLEKLEKFADDEE 412 (713)
T ss_dssp ESSHHHHHHHHHTT----THHHHHHSGGGEEE----B-TCCCCCCTSHHHHHHHHHHHTSGGGCSGGGGGGGGGGCCSHH
T ss_pred chHHHHHHHHHHHH----hhhhhhcCCceeeccccCccCcccccccCHHHHHHHHHHhccccccCHHHHHHHHHhhCchH
Confidence 99999987654322 233445566789999999999999864 345778888888884111
Q ss_pred --------------HhHHHHHHHcCCCCCCCCCEEEEecccccccCHHH-HHH---HHHhhhc------CCcEEEEEeCC
Q 008154 365 --------------QCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDL-IRL---AAPEILA------DDIQFVMLGSG 420 (576)
Q Consensus 365 --------------~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~-ll~---a~~~L~~------~~~~lii~G~g 420 (576)
...+.+++..++..+++.+.++++.||.+||+..+ ++. -+.+|++ .|++++|+|++
T Consensus 413 ~~~~~~~vK~~~K~rl~~~i~~~~~~~ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKA 492 (713)
T PF00343_consen 413 FQEELREVKQENKERLAEYIKKRTGVELDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKA 492 (713)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSS---TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccC
Confidence 11223344557666789999999999999999999 444 4445543 37999999999
Q ss_pred ChhhHHHHHHHHH------------HhcC--ceEEEccCChhHHHHHHhcCCEEEeCCC--CCCCcHHHHHHHHcCCceE
Q 008154 421 DPQFESWMRDTEA------------TYKD--KYRGWVGFNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYGTIPV 484 (576)
Q Consensus 421 ~~~~~~~~~~~~~------------~~~~--~~~~~~~~~~~~~~~ll~~~Dv~v~ps~--~E~~g~s~lEAma~G~pvI 484 (576)
+|.+...++.++. .... +++++++|+..+++.++++||||++.|+ .|++|++.|+||.+|.+++
T Consensus 493 hP~d~~gK~iIk~I~~va~~in~Dp~v~~~lkVvFlenYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~l 572 (713)
T PF00343_consen 493 HPGDYMGKEIIKLINNVAEVINNDPEVGDRLKVVFLENYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNL 572 (713)
T ss_dssp -TT-HHHHHHHHHHHHHHHHHCT-TTTCCGEEEEEETT-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEE
T ss_pred CCCcHHHHHHHHHHHHHHHHHhcChhhccceeEEeecCCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEE
Confidence 9887766655542 1122 7899999999999999999999999998 7999999999999999999
Q ss_pred EeCccccccccccccccccCCCCCcceeEeC
Q 008154 485 VHATGGLRDTVENFNPFAREGSGEGTGWSFL 515 (576)
Q Consensus 485 at~~gg~~e~i~~~~~~~~~~~~~~~G~~~~ 515 (576)
+|.+||+.|+.... +.+|.|+|.
T Consensus 573 stlDG~niEi~e~v--------G~eN~fiFG 595 (713)
T PF00343_consen 573 STLDGWNIEIAEAV--------GEENIFIFG 595 (713)
T ss_dssp EESSTCHHHHHHHH---------GGGSEEES
T ss_pred ecccchhHHHHHhc--------CCCcEEEcC
Confidence 99999999997642 136788884
No 70
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.96 E-value=7.5e-28 Score=248.58 Aligned_cols=204 Identities=18% Similarity=0.150 Sum_probs=161.7
Q ss_pred hHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHH
Q 008154 289 VLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKI 368 (576)
Q Consensus 289 ~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 368 (576)
+++.+++.+|.++++|+.+++.+.+ .+ ..+..+|+||+|.+.|.+..
T Consensus 146 ~~~~~~~~~d~ii~~S~~~~~~~~~---------~~---~~~~~vi~~~~d~~~~~~~~--------------------- 192 (351)
T cd03804 146 WDRRSAARVDYFIANSRFVARRIKK---------YY---GRDATVIYPPVDTDRFTPAE--------------------- 192 (351)
T ss_pred HHHHHhcCCCEEEECCHHHHHHHHH---------Hh---CCCcEEECCCCCHhhcCcCC---------------------
Confidence 5566789999999999998877631 22 23467999999987765432
Q ss_pred HHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChh
Q 008154 369 ALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVP 448 (576)
Q Consensus 369 ~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (576)
.....++++||+.+.||++.+++|+.++ +++|+|+|+|+. .+...+ ....++.+....+.+
T Consensus 193 -----------~~~~~il~~G~~~~~K~~~~li~a~~~~---~~~l~ivG~g~~-~~~l~~----~~~~~V~~~g~~~~~ 253 (351)
T cd03804 193 -----------EKEDYYLSVGRLVPYKRIDLAIEAFNKL---GKRLVVIGDGPE-LDRLRA----KAGPNVTFLGRVSDE 253 (351)
T ss_pred -----------CCCCEEEEEEcCccccChHHHHHHHHHC---CCcEEEEECChh-HHHHHh----hcCCCEEEecCCCHH
Confidence 1345789999999999999999999988 389999999953 222222 344566554444666
Q ss_pred HHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHH
Q 008154 449 ISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRF 528 (576)
Q Consensus 449 ~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~ 528 (576)
.+..+++.||++++||. |++|++++|||+||+|||+++.|+..|.+.+ +.+|++++++|+++++++|..
T Consensus 254 ~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~----------~~~G~~~~~~~~~~la~~i~~ 322 (351)
T cd03804 254 ELRDLYARARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVID----------GVTGILFEEQTVESLAAAVER 322 (351)
T ss_pred HHHHHHHhCCEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeC----------CCCEEEeCCCCHHHHHHHHHH
Confidence 77789999999999999 9999999999999999999999999999988 889999999999999999998
Q ss_pred HHHHhhhCH-HHHHHHHHHHHhhhCCHHHHHHHH
Q 008154 529 AIRTYREHK-SSWEGLMRRGMEKDYTWENAAIQY 561 (576)
Q Consensus 529 ~l~~~~~~~-~~~~~~~~~a~~~~fs~~~~~~~y 561 (576)
++. |+ ....++.++ +++|+|+++.+++
T Consensus 323 l~~----~~~~~~~~~~~~--~~~~~~~~~~~~~ 350 (351)
T cd03804 323 FEK----NEDFDPQAIRAH--AERFSESRFREKI 350 (351)
T ss_pred HHh----CcccCHHHHHHH--HHhcCHHHHHHHh
Confidence 876 44 333444333 3579999998875
No 71
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.96 E-value=9.8e-28 Score=255.36 Aligned_cols=220 Identities=13% Similarity=0.088 Sum_probs=166.7
Q ss_pred HHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHH
Q 008154 294 IVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 373 (576)
Q Consensus 294 ~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 373 (576)
++.+|.++++|+..++.+... .+.......++.+||||++...+.+..
T Consensus 268 ~~~~D~iI~~S~~~~~~l~~~------~~~~~~~~~ki~viP~g~~~~~~~~~~-------------------------- 315 (500)
T TIGR02918 268 ADYIDFFITATDIQNQILKNQ------FKKYYNIEPRIYTIPVGSLDELQYPEQ-------------------------- 315 (500)
T ss_pred hhhCCEEEECCHHHHHHHHHH------hhhhcCCCCcEEEEcCCCcccccCccc--------------------------
Confidence 467899999999887776421 001122356799999998644332211
Q ss_pred cCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHH
Q 008154 374 LGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISH 451 (576)
Q Consensus 374 ~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (576)
. .+...|+++||+.+.||++.+++|+.++.+ ++++|+|+|+|+. .+...+.+.+......+.+.|+. + ..
T Consensus 316 ---~--r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~~-~~~l~~~i~~~~l~~~V~f~G~~-~-~~ 387 (500)
T TIGR02918 316 ---E--RKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGGE-KQKLQKIINENQAQDYIHLKGHR-N-LS 387 (500)
T ss_pred ---c--cCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEECchh-HHHHHHHHHHcCCCCeEEEcCCC-C-HH
Confidence 0 245689999999999999999999999875 6899999999963 33433444332223444566764 2 44
Q ss_pred HHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCcc-ccccccccccccccCCCCCcceeEeCC----CC----HHHH
Q 008154 452 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG-GLRDTVENFNPFAREGSGEGTGWSFLP----LS----EESM 522 (576)
Q Consensus 452 ~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~g-g~~e~i~~~~~~~~~~~~~~~G~~~~~----~d----~~~l 522 (576)
.+++.+|++|+||.+|+||++++||||||+|||+++.+ |.+|++.+ |.+|+++++ +| ++++
T Consensus 388 ~~~~~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~----------g~nG~lv~~~~~~~d~~~~~~~l 457 (500)
T TIGR02918 388 EVYKDYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIED----------NKNGYLIPIDEEEDDEDQIITAL 457 (500)
T ss_pred HHHHhCCEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccC----------CCCEEEEeCCccccchhHHHHHH
Confidence 79999999999999999999999999999999999986 89999998 999999974 33 6667
Q ss_pred HHHHHHHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHh
Q 008154 523 LTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWA 568 (576)
Q Consensus 523 a~~i~~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~~ 568 (576)
|++|.+++ +++.+.+|++++ .+++|||++++++|.++++++
T Consensus 458 a~~I~~ll-----~~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~~~ 500 (500)
T TIGR02918 458 AEKIVEYF-----NSNDIDAFHEYSYQIAEGFLTANIIEKWKKLVREV 500 (500)
T ss_pred HHHHHHHh-----ChHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 77776665 344678888887 467999999999999998764
No 72
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.96 E-value=4.2e-28 Score=254.59 Aligned_cols=222 Identities=17% Similarity=0.204 Sum_probs=165.3
Q ss_pred hhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhH
Q 008154 288 NVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCK 367 (576)
Q Consensus 288 ~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 367 (576)
.+++..++.+|.++++|+...+.+. +.......++.+||||+|.+.|.+....
T Consensus 164 ~~e~~~~~~ad~vi~~S~~~~~~l~---------~~~~~~~~~v~vipngvd~~~f~~~~~~------------------ 216 (397)
T TIGR03087 164 AYERAIAARFDAATFVSRAEAELFR---------RLAPEAAGRITAFPNGVDADFFSPDRDY------------------ 216 (397)
T ss_pred HHHHHHHhhCCeEEEcCHHHHHHHH---------HhCCCCCCCeEEeecccchhhcCCCccc------------------
Confidence 3677888999999999998887653 1222345689999999999888654321
Q ss_pred HHHHHHcCCCCCCCCCEEEEecccccccCHHHHH----HHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEE
Q 008154 368 IALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIR----LAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRG 441 (576)
Q Consensus 368 ~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll----~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~ 441 (576)
...++ ++..+|+|+||+.+.||++.++ +++..+.+ ++++|+|+|+|+. ++ .+.+... .++.
T Consensus 217 -----~~~~~--~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~--~~-~~~l~~~--~~V~- 283 (397)
T TIGR03087 217 -----PNPYP--PGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPS--PA-VRALAAL--PGVT- 283 (397)
T ss_pred -----cCCCC--CCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCCh--HH-HHHhccC--CCeE-
Confidence 00111 3567899999999999999888 44555543 6899999999863 22 2222222 2333
Q ss_pred EccCChhHHHHHHhcCCEEEeCCC-CCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHH
Q 008154 442 WVGFNVPISHRITAGCDILLMPSR-FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEE 520 (576)
Q Consensus 442 ~~~~~~~~~~~ll~~~Dv~v~ps~-~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~ 520 (576)
+.|+.++ ...+++.||++|+||. .|++|++++||||||+|||+|+.++. ..... +++|+++. +|++
T Consensus 284 ~~G~v~~-~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~----------~~~g~lv~-~~~~ 350 (397)
T TIGR03087 284 VTGSVAD-VRPYLAHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAE-GIDAL----------PGAELLVA-ADPA 350 (397)
T ss_pred EeeecCC-HHHHHHhCCEEEecccccCCcccHHHHHHHcCCCEEecCcccc-ccccc----------CCcceEeC-CCHH
Confidence 3344333 4579999999999998 59999999999999999999997642 22222 46788886 7999
Q ss_pred HHHHHHHHHHHHhhhCHHHHHHHHHHH---HhhhCCHHHHHHHHHHHHH
Q 008154 521 SMLTALRFAIRTYREHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 521 ~la~~i~~~l~~~~~~~~~~~~~~~~a---~~~~fs~~~~~~~y~~~y~ 566 (576)
+++++|.+++. |++.+.+|++++ +.++|||+++++++.++|+
T Consensus 351 ~la~ai~~ll~----~~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 351 DFAAAILALLA----NPAEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred HHHHHHHHHHc----CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 99999999875 788888888887 3568999999999999875
No 73
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.96 E-value=9.1e-27 Score=244.53 Aligned_cols=219 Identities=15% Similarity=0.168 Sum_probs=173.6
Q ss_pred hHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHH
Q 008154 289 VLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKI 368 (576)
Q Consensus 289 ~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 368 (576)
+.+.+++.+|.++++|+...+.+. +.++....++.+++||++...+.+...
T Consensus 176 ~~~~~~~~~d~ii~~S~~~~~~l~---------~~~~~~~~ki~vi~~gv~~~~~~~~~~-------------------- 226 (407)
T cd04946 176 LRRYLLSSLDAVFPCSEQGRNYLQ---------KRYPAYKEKIKVSYLGVSDPGIISKPS-------------------- 226 (407)
T ss_pred HHHHHHhcCCEEEECCHHHHHHHH---------HHCCCccccEEEEECCcccccccCCCC--------------------
Confidence 445567899999999999887753 344556678999999999766543311
Q ss_pred HHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhcC----CcEEEEEeCCChhhHHHHHHHHHHh-cCceEEEc
Q 008154 369 ALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILAD----DIQFVMLGSGDPQFESWMRDTEATY-KDKYRGWV 443 (576)
Q Consensus 369 ~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~----~~~lii~G~g~~~~~~~~~~~~~~~-~~~~~~~~ 443 (576)
..+.+.++++||+.+.||++.+++|+.++.+. +++++++|+|+. .+...+.+.+.. ..++. +.
T Consensus 227 ----------~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~-~~~l~~~~~~~~~~~~V~-f~ 294 (407)
T cd04946 227 ----------KDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPL-EDTLKELAESKPENISVN-FT 294 (407)
T ss_pred ----------CCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchH-HHHHHHHHHhcCCCceEE-Ee
Confidence 13568899999999999999999999999763 567888999852 344444443322 23444 45
Q ss_pred cC-ChhHHHHHHh--cCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCC-CH
Q 008154 444 GF-NVPISHRITA--GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPL-SE 519 (576)
Q Consensus 444 ~~-~~~~~~~ll~--~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~-d~ 519 (576)
|+ +.+.+..+++ .+|++++||.+|++|++++||||+|+|||+|+.||.+|.+.+ +++|++++++ |+
T Consensus 295 G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~----------~~~G~l~~~~~~~ 364 (407)
T cd04946 295 GELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDN----------GGNGLLLSKDPTP 364 (407)
T ss_pred cCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcC----------CCcEEEeCCCCCH
Confidence 54 5555667776 489999999999999999999999999999999999999998 8899999874 79
Q ss_pred HHHHHHHHHHHHHhhhCHHHHHHHHHHH---HhhhCCHHHHHHHHH
Q 008154 520 ESMLTALRFAIRTYREHKSSWEGLMRRG---MEKDYTWENAAIQYE 562 (576)
Q Consensus 520 ~~la~~i~~~l~~~~~~~~~~~~~~~~a---~~~~fs~~~~~~~y~ 562 (576)
++++++|.+++. |++.+.+|++++ +.++|+|+...++|.
T Consensus 365 ~~la~~I~~ll~----~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 365 NELVSSLSKFID----NEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 999999999875 888999998888 457999999998875
No 74
>PHA01630 putative group 1 glycosyl transferase
Probab=99.95 E-value=8.2e-27 Score=236.27 Aligned_cols=218 Identities=17% Similarity=0.155 Sum_probs=160.8
Q ss_pred hHHHH-HHhccceeccCccchhhhccccCCcchhhhhhcc-CCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHh
Q 008154 289 VLKGA-IVTADRLLTVSKGYSWEITTVEGGYGLHEILSSR-KSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQC 366 (576)
Q Consensus 289 ~~~~a-~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~-~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~ 366 (576)
++..+ .+.+|.++++|+...+.+.+ .... ..++.+||||||.+.|.+....
T Consensus 86 ~~~~~~~~~ad~ii~~S~~~~~~l~~----------~g~~~~~~i~vIpNGVd~~~f~~~~~~----------------- 138 (331)
T PHA01630 86 ALYFFRNQPVDEIVVPSQWSKNAFYT----------SGLKIPQPIYVIPHNLNPRMFEYKPKE----------------- 138 (331)
T ss_pred HHHHHhhccCCEEEECCHHHHHHHHH----------cCCCCCCCEEEECCCCCHHHcCCCccc-----------------
Confidence 34444 57899999999998877632 1111 3579999999998877654311
Q ss_pred HHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEE-c
Q 008154 367 KIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGW-V 443 (576)
Q Consensus 367 ~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~-~ 443 (576)
..+.++++++|++.+.||++.|++|++.+.+ ++++++++|++... .. +. .+.+. .
T Consensus 139 ------------~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~~-~~----l~-----~~~~~~~ 196 (331)
T PHA01630 139 ------------KPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNMLD-PR----LF-----GLNGVKT 196 (331)
T ss_pred ------------cCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCcccc-hh----hc-----cccceec
Confidence 0245678888999999999999999999976 58999999976421 11 10 11122 1
Q ss_pred cCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCC-------
Q 008154 444 GFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLP------- 516 (576)
Q Consensus 444 ~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~------- 516 (576)
..+.+....+|+.||++++||.+|+||++++||||||+|||+|+.||+.|++.+ +.||+++++
T Consensus 197 ~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~----------~~ng~lv~~~~~~~~~ 266 (331)
T PHA01630 197 PLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLS----------NLDVYWIKSGRKPKLW 266 (331)
T ss_pred cCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccC----------CCceEEeeeccccccc
Confidence 124456678999999999999999999999999999999999999999999988 666665532
Q ss_pred ------------CCHHHHHHHHHHHHHHhhhCHHHHHHHHH-HH--HhhhCCHHHHHHHHHHHHHH
Q 008154 517 ------------LSEESMLTALRFAIRTYREHKSSWEGLMR-RG--MEKDYTWENAAIQYEQVFEW 567 (576)
Q Consensus 517 ------------~d~~~la~~i~~~l~~~~~~~~~~~~~~~-~a--~~~~fs~~~~~~~y~~~y~~ 567 (576)
.|.+++++++.+++.+. +++.+.+++. ++ .+++|||++++++|.++|++
T Consensus 267 ~~~~~~~G~~v~~~~~~~~~~ii~~l~~~--~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 267 YTNPIHVGYFLDPDIEDAYQKLLEALANW--TPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred ccCCcccccccCCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 26788888888777621 2233444333 33 57899999999999999964
No 75
>PLN02275 transferase, transferring glycosyl groups
Probab=99.95 E-value=7.3e-26 Score=234.96 Aligned_cols=245 Identities=14% Similarity=0.027 Sum_probs=168.8
Q ss_pred CccEEEeCCCccch--HHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCCh-hhhccccccccccccccc
Q 008154 204 EKCIFLVNDWHAGL--VPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPS-EWYGALEWVFPTWARTHA 280 (576)
Q Consensus 204 ~pDVvH~~~~~~~~--~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 280 (576)
+|||||+|...... ....+..+. .++|+|+|.|+... .. ...+... .....
T Consensus 100 ~~DvV~~~~~~~~~~~~~~~~~~~~------~~~p~v~~~h~~~~------~~-~~~~~~~~~~~~~------------- 153 (371)
T PLN02275 100 RPDVFLVQNPPSVPTLAVVKLACWL------RRAKFVIDWHNFGY------TL-LALSLGRSHPLVR------------- 153 (371)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHH------hCCCEEEEcCCccH------HH-HhcccCCCCHHHH-------------
Confidence 89999998754422 122222222 46899999997521 11 1111110 00000
Q ss_pred CCcCccchhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCc
Q 008154 281 LDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDL 360 (576)
Q Consensus 281 ~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~ 360 (576)
-...+++..++.||.++++|+.+.+.+.+ ..+. ++.+|+||++ +.|.+....
T Consensus 154 ----~~~~~e~~~~~~ad~ii~~S~~~~~~l~~---------~~g~---~i~vi~n~~~-~~f~~~~~~----------- 205 (371)
T PLN02275 154 ----LYRWYERHYGKMADGHLCVTKAMQHELDQ---------NWGI---RATVLYDQPP-EFFRPASLE----------- 205 (371)
T ss_pred ----HHHHHHHHHHhhCCEEEECCHHHHHHHHH---------hcCC---CeEEECCCCH-HHcCcCCch-----------
Confidence 00135777889999999999998877631 1122 2789999953 556543211
Q ss_pred ccchHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhh-------------------cCCcEEEEEeCCC
Q 008154 361 SGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEIL-------------------ADDIQFVMLGSGD 421 (576)
Q Consensus 361 ~~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~-------------------~~~~~lii~G~g~ 421 (576)
..+.. ++..+++++||+.+.||++.+++|+..+. .++++|+|+|+|+
T Consensus 206 -------------~~~~~-~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~ 271 (371)
T PLN02275 206 -------------IRLRP-NRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKGP 271 (371)
T ss_pred -------------hcccC-CCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCCC
Confidence 00111 23457889999999999999999998873 2579999999996
Q ss_pred hhhHHHHHHHHHHhcCceEEEccC-ChhHHHHHHhcCCEEEeCCC---CCCCcHHHHHHHHcCCceEEeCcccccccccc
Q 008154 422 PQFESWMRDTEATYKDKYRGWVGF-NVPISHRITAGCDILLMPSR---FEPCGLNQLYAMRYGTIPVVHATGGLRDTVEN 497 (576)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~Dv~v~ps~---~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~ 497 (576)
..++..+.+++....++.++.++ +.+....+|+.||++|.|+. .|++|++++||||||+|||+++.||..|++.+
T Consensus 272 -~~~~l~~~~~~~~l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~ 350 (371)
T PLN02275 272 -QKAMYEEKISRLNLRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKD 350 (371)
T ss_pred -CHHHHHHHHHHcCCCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccC
Confidence 34555555554333456665653 56667789999999998642 48999999999999999999999999999998
Q ss_pred ccccccCCCCCcceeEeCCCCHHHHHHHHHHH
Q 008154 498 FNPFAREGSGEGTGWSFLPLSEESMLTALRFA 529 (576)
Q Consensus 498 ~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~ 529 (576)
+.+|++++ |+++++++|.++
T Consensus 351 ----------g~~G~lv~--~~~~la~~i~~l 370 (371)
T PLN02275 351 ----------GKNGLLFS--SSSELADQLLEL 370 (371)
T ss_pred ----------CCCeEEEC--CHHHHHHHHHHh
Confidence 89999996 688888888765
No 76
>PHA01633 putative glycosyl transferase group 1
Probab=99.95 E-value=1.4e-25 Score=224.40 Aligned_cols=231 Identities=16% Similarity=0.212 Sum_probs=161.4
Q ss_pred HHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHH
Q 008154 292 GAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQ 371 (576)
Q Consensus 292 ~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 371 (576)
..+...+.++++|+.+++.+.. .+.+.. .+|+||+|.+.|.+.... ...++
T Consensus 88 ~~m~~~~~vIavS~~t~~~L~~----------~G~~~~--i~I~~GVD~~~f~p~~~~-----------------~~~~r 138 (335)
T PHA01633 88 KYLLQDVKFIPNSKFSAENLQE----------VGLQVD--LPVFHGINFKIVENAEKL-----------------VPQLK 138 (335)
T ss_pred HHHhcCCEEEeCCHHHHHHHHH----------hCCCCc--eeeeCCCChhhcCccchh-----------------hHHHH
Confidence 3445567999999999987642 112222 357899999888765421 23455
Q ss_pred HHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--C----CcEEEEEeCCChhhHHHHHHHHHHhcCceEEE--c
Q 008154 372 KELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D----DIQFVMLGSGDPQFESWMRDTEATYKDKYRGW--V 443 (576)
Q Consensus 372 ~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~----~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~--~ 443 (576)
+.++... ++.++++++||+.++||++.+++|+++|.+ + +++++++|.+ . .+.+ ....++.+. .
T Consensus 139 ~~~~~~~-~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~--~----~~~l--~l~~~V~f~g~~ 209 (335)
T PHA01633 139 QKLDKDF-PDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK--Q----FTQL--EVPANVHFVAEF 209 (335)
T ss_pred HHhCcCC-CCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH--H----HHHc--CCCCcEEEEecC
Confidence 5555321 356889999999999999999999999975 2 3578888742 1 1111 233344433 2
Q ss_pred cC-ChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccc-----ccccc-C--CCCCcceeEe
Q 008154 444 GF-NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENF-----NPFAR-E--GSGEGTGWSF 514 (576)
Q Consensus 444 ~~-~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~-----~~~~~-~--~~~~~~G~~~ 514 (576)
++ +.+.+..+|+++|++|+||.+|+||++++||||||+|||+++.|+++|+..+- +..+. + +.....||.+
T Consensus 210 G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~ 289 (335)
T PHA01633 210 GHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKI 289 (335)
T ss_pred CCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeee
Confidence 44 34566789999999999999999999999999999999999999999975530 00000 0 0113468899
Q ss_pred CCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHHhhhCCHHHHHHHHHH
Q 008154 515 LPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQ 563 (576)
Q Consensus 515 ~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~ 563 (576)
++.|+++++++|..++.. .+++.+. +..+..+++|+|++++++|++
T Consensus 290 ~~~d~~~la~ai~~~~~~--~~~~~~~-~~~~~~a~~f~~~~~~~~~~~ 335 (335)
T PHA01633 290 HKFQIEDMANAIILAFEL--QDREERS-MKLKELAKKYDIRNLYTRFLE 335 (335)
T ss_pred cCCCHHHHHHHHHHHHhc--cChhhhh-HHHHHHHHhcCHHHHHHHhhC
Confidence 999999999999998764 2444442 222236789999999999864
No 77
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.94 E-value=2.9e-25 Score=231.19 Aligned_cols=213 Identities=15% Similarity=0.150 Sum_probs=168.3
Q ss_pred HHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHH
Q 008154 294 IVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 373 (576)
Q Consensus 294 ~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 373 (576)
++.+|.++++|+...+.+.. .+.. ..++.+||||++...+.+....
T Consensus 155 ~~~~d~ii~~s~~~~~~l~~---------~~~~-~~~v~~ip~g~~~~~~~~~~~~------------------------ 200 (372)
T cd04949 155 LDKVDGVIVATEQQKQDLQK---------QFGN-YNPIYTIPVGSIDPLKLPAQFK------------------------ 200 (372)
T ss_pred hhhCCEEEEccHHHHHHHHH---------HhCC-CCceEEEcccccChhhcccchh------------------------
Confidence 57899999999988877632 2222 2348999999997665443100
Q ss_pred cCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHH
Q 008154 374 LGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISH 451 (576)
Q Consensus 374 ~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (576)
+ .+...++++||+.+.||++.+++|+.++.+ ++++|+|+|.|+. .....+.+.+......+.+.++..+ +.
T Consensus 201 ---~--~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~~-~~~~~~~~~~~~~~~~v~~~g~~~~-~~ 273 (372)
T cd04949 201 ---Q--RKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGDE-EEKLKELIEELGLEDYVFLKGYTRD-LD 273 (372)
T ss_pred ---h--cCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEeCch-HHHHHHHHHHcCCcceEEEcCCCCC-HH
Confidence 1 245789999999999999999999999875 6899999999963 2333333332222233445665444 55
Q ss_pred HHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCcc-ccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHH
Q 008154 452 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG-GLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAI 530 (576)
Q Consensus 452 ~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~g-g~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l 530 (576)
.+++.||++|+||..|++|++++|||++|+|||+++.+ |..+++.+ +.+|++++++|+++++++|..++
T Consensus 274 ~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~----------~~~G~lv~~~d~~~la~~i~~ll 343 (372)
T cd04949 274 EVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIED----------GENGYLVPKGDIEALAEAIIELL 343 (372)
T ss_pred HHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHccc----------CCCceEeCCCcHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999987 78899988 89999999999999999999988
Q ss_pred HHhhhCHHHHHHHHHHHH--hhhCCHHHHHHHH
Q 008154 531 RTYREHKSSWEGLMRRGM--EKDYTWENAAIQY 561 (576)
Q Consensus 531 ~~~~~~~~~~~~~~~~a~--~~~fs~~~~~~~y 561 (576)
. +++.+.++++++. +++|||++++++|
T Consensus 344 ~----~~~~~~~~~~~a~~~~~~~s~~~~~~~w 372 (372)
T cd04949 344 N----DPKLLQKFSEAAYENAERYSEENVWEKW 372 (372)
T ss_pred c----CHHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence 5 7888999998883 5799999998864
No 78
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=99.94 E-value=2.7e-25 Score=235.74 Aligned_cols=298 Identities=16% Similarity=0.144 Sum_probs=199.3
Q ss_pred CccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhh-hhhcCCChhhhcc-cccccccccccccC
Q 008154 204 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAAT-YKNLGLPSEWYGA-LEWVFPTWARTHAL 281 (576)
Q Consensus 204 ~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 281 (576)
..|+||+|+.|..++|.+++++. ++++++|.+|.+ ||... ++.+......+.. +...+..|.
T Consensus 131 ~~d~iwihDyhl~llp~~lr~~~------~~~~i~~f~Hip-----fP~~e~~~~lp~~~~ll~~~l~~D~igF~----- 194 (460)
T cd03788 131 PGDLVWVHDYHLLLLPQMLRERG------PDARIGFFLHIP-----FPSSEIFRCLPWREELLRGLLGADLIGFQ----- 194 (460)
T ss_pred CCCEEEEeChhhhHHHHHHHhhC------CCCeEEEEEeCC-----CCChHHHhhCCChHHHHHHHhcCCEEEEC-----
Confidence 45999999999999999988765 678999999998 33332 2333222111111 111111111
Q ss_pred CcCccchhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcc
Q 008154 282 DTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLS 361 (576)
Q Consensus 282 ~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~ 361 (576)
.....+..++.|+.++..+......+. +.....++.++|||||++.|.+....
T Consensus 195 ----t~~~~~~Fl~~~~~~l~~~~~~~~~i~-----------~~g~~~~i~vip~GID~~~f~~~~~~------------ 247 (460)
T cd03788 195 ----TERYARNFLSCCSRLLGLEVTDDGGVE-----------YGGRRVRVGAFPIGIDPDAFRKLAAS------------ 247 (460)
T ss_pred ----CHHHHHHHHHHHHHHcCCcccCCceEE-----------ECCEEEEEEEEeCeEcHHHHHHHhcC------------
Confidence 122344455566666666654321111 11234568999999998887654321
Q ss_pred cchHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--C----CcEEEEEeCCC----hhhHHHHHHH
Q 008154 362 GKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D----DIQFVMLGSGD----PQFESWMRDT 431 (576)
Q Consensus 362 ~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~----~~~lii~G~g~----~~~~~~~~~~ 431 (576)
...+...++..+.. ++..+|+++||+.+.||++.+++|++++.+ + +++|+++|.+. +...+..+.+
T Consensus 248 --~~~~~~~~~~~~~~--~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~~~l 323 (460)
T cd03788 248 --PEVQERAAELRERL--GGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTDVPEYQELRREV 323 (460)
T ss_pred --chhHHHHHHHHHhc--CCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcCcHHHHHHHHHH
Confidence 01122233334443 467899999999999999999999999865 2 36788887532 2233333333
Q ss_pred HH---Hhc--------CceEEEccC-ChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCc----eEEeCcccccccc
Q 008154 432 EA---TYK--------DKYRGWVGF-NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTI----PVVHATGGLRDTV 495 (576)
Q Consensus 432 ~~---~~~--------~~~~~~~~~-~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~p----vIat~~gg~~e~i 495 (576)
.+ ..+ ..++.+.+. +.+....+|+.||++|+||..|++|++++||||||+| +|+|+.+|..+..
T Consensus 324 ~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~~ 403 (460)
T cd03788 324 EELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEEL 403 (460)
T ss_pred HHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhhc
Confidence 32 211 124445443 6667779999999999999999999999999999999 9999888877652
Q ss_pred ccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHH
Q 008154 496 ENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQV 564 (576)
Q Consensus 496 ~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~ 564 (576)
.+|++++|.|+++++++|.+++.+ +++++.++++++ ..++|++++.++++++-
T Consensus 404 -------------~~g~lv~p~d~~~la~ai~~~l~~---~~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~ 458 (460)
T cd03788 404 -------------SGALLVNPYDIDEVADAIHRALTM---PLEERRERHRKLREYVRTHDVQAWANSFLDD 458 (460)
T ss_pred -------------CCCEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 579999999999999999999862 345555565554 34689999999998764
No 79
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.93 E-value=1.6e-23 Score=216.76 Aligned_cols=342 Identities=14% Similarity=0.034 Sum_probs=222.5
Q ss_pred CceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEE
Q 008154 65 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFH 144 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (576)
+|||++++.+ .||....+.+++++|.++||+|++++....... ..+
T Consensus 1 ~~~i~i~~~g------~gG~~~~~~~la~~L~~~g~ev~vv~~~~~~~~---~~~------------------------- 46 (357)
T PRK00726 1 MKKILLAGGG------TGGHVFPALALAEELKKRGWEVLYLGTARGMEA---RLV------------------------- 46 (357)
T ss_pred CcEEEEEcCc------chHhhhHHHHHHHHHHhCCCEEEEEECCCchhh---hcc-------------------------
Confidence 3899999753 588999999999999999999999986431100 000
Q ss_pred eeecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHh
Q 008154 145 EYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLAS 224 (576)
Q Consensus 145 ~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~ 224 (576)
...|++++.++.+...... ...- ......+........+.++.. +|||||+|.+.+++...+..
T Consensus 47 -~~~g~~~~~~~~~~~~~~~-~~~~-----l~~~~~~~~~~~~~~~~ik~~--------~pDvv~~~~~~~~~~~~~~~- 110 (357)
T PRK00726 47 -PKAGIEFHFIPSGGLRRKG-SLAN-----LKAPFKLLKGVLQARKILKRF--------KPDVVVGFGGYVSGPGGLAA- 110 (357)
T ss_pred -ccCCCcEEEEeccCcCCCC-hHHH-----HHHHHHHHHHHHHHHHHHHhc--------CCCEEEECCCcchhHHHHHH-
Confidence 0136677776533211100 0000 000111111112223333222 79999999877666544433
Q ss_pred hccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccC
Q 008154 225 KYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 304 (576)
Q Consensus 225 ~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS 304 (576)
+. .++|+|++.|+.. + + ...+...+.+|.+++++
T Consensus 111 ~~------~~~p~v~~~~~~~-----~-------~----------------------------~~~r~~~~~~d~ii~~~ 144 (357)
T PRK00726 111 RL------LGIPLVIHEQNAV-----P-------G----------------------------LANKLLARFAKKVATAF 144 (357)
T ss_pred HH------cCCCEEEEcCCCC-----c-------c----------------------------HHHHHHHHHhchheECc
Confidence 33 5689998777421 0 0 02344557889998887
Q ss_pred ccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCE
Q 008154 305 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPL 384 (576)
Q Consensus 305 ~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 384 (576)
+... . ..+..++.+++||++.+.+.+... +..++++ ++..+
T Consensus 145 ~~~~------------~---~~~~~~i~vi~n~v~~~~~~~~~~----------------------~~~~~~~--~~~~~ 185 (357)
T PRK00726 145 PGAF------------P---EFFKPKAVVTGNPVREEILALAAP----------------------PARLAGR--EGKPT 185 (357)
T ss_pred hhhh------------h---ccCCCCEEEECCCCChHhhcccch----------------------hhhccCC--CCCeE
Confidence 6321 1 135678999999999765543210 1234544 46678
Q ss_pred EEEecccccccCHHHHH-HHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEeC
Q 008154 385 IGFIGRLDYQKGIDLIR-LAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMP 463 (576)
Q Consensus 385 i~~~Gr~~~~Kg~~~ll-~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~p 463 (576)
|+++|+....|+...++ +|++++.+.+..++++|+++ .++..+.+ + ...+ +.+.++.. ....+++.||+++.+
T Consensus 186 i~~~gg~~~~~~~~~~l~~a~~~~~~~~~~~~~~G~g~--~~~~~~~~-~-~~~~-v~~~g~~~-~~~~~~~~~d~~i~~ 259 (357)
T PRK00726 186 LLVVGGSQGARVLNEAVPEALALLPEALQVIHQTGKGD--LEEVRAAY-A-AGIN-AEVVPFID-DMAAAYAAADLVICR 259 (357)
T ss_pred EEEECCcHhHHHHHHHHHHHHHHhhhCcEEEEEcCCCc--HHHHHHHh-h-cCCc-EEEeehHh-hHHHHHHhCCEEEEC
Confidence 89999988888765554 99988865445577889986 34444444 2 4434 44556643 355899999999987
Q ss_pred CCCCCCcHHHHHHHHcCCceEEeCcccc--------ccccccccccccCCCCCcceeEeCCCC--HHHHHHHHHHHHHHh
Q 008154 464 SRFEPCGLNQLYAMRYGTIPVVHATGGL--------RDTVENFNPFAREGSGEGTGWSFLPLS--EESMLTALRFAIRTY 533 (576)
Q Consensus 464 s~~E~~g~s~lEAma~G~pvIat~~gg~--------~e~i~~~~~~~~~~~~~~~G~~~~~~d--~~~la~~i~~~l~~~ 533 (576)
+ -+.+++|||++|+|+|++..++. .+.+.+ .++|+++++.| +++++++|.+++.
T Consensus 260 ~----g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~----------~~~g~~~~~~~~~~~~l~~~i~~ll~-- 323 (357)
T PRK00726 260 A----GASTVAELAAAGLPAILVPLPHAADDHQTANARALVD----------AGAALLIPQSDLTPEKLAEKLLELLS-- 323 (357)
T ss_pred C----CHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHH----------CCCEEEEEcccCCHHHHHHHHHHHHc--
Confidence 6 26899999999999999876432 245555 67899998877 8999999998875
Q ss_pred hhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHH
Q 008154 534 REHKSSWEGLMRRG--MEKDYTWENAAIQYEQVF 565 (576)
Q Consensus 534 ~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y 565 (576)
|++.+++|++++ +.+.++.+++++.+.+..
T Consensus 324 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (357)
T PRK00726 324 --DPERLEAMAEAARALGKPDAAERLADLIEELA 355 (357)
T ss_pred --CHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHh
Confidence 788888888887 356799999998887764
No 80
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=99.93 E-value=1.2e-23 Score=221.22 Aligned_cols=290 Identities=16% Similarity=0.158 Sum_probs=195.6
Q ss_pred ccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCCh-hhhhhcCCChhhhcccccccccccccccCCc
Q 008154 205 KCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPA-ATYKNLGLPSEWYGALEWVFPTWARTHALDT 283 (576)
Q Consensus 205 pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (576)
-|+|.+||.|..++|.++++.. +.+++.|..|.| ||. +.++.+.....
T Consensus 128 ~d~vwvhDYhl~l~p~~lr~~~------~~~~igfFlHip-----fP~~e~f~~lp~r~~-------------------- 176 (456)
T TIGR02400 128 GDIVWVHDYHLMLLPAMLRELG------VQNKIGFFLHIP-----FPSSEIYRTLPWRRE-------------------- 176 (456)
T ss_pred CCEEEEecchhhHHHHHHHhhC------CCCeEEEEEeCC-----CCChHHHhhCCcHHH--------------------
Confidence 4899999999999999999876 678999999987 333 33344432222
Q ss_pred CccchhHHHHHHhccceeccCccchhhhccccC--------CcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccC
Q 008154 284 GEAVNVLKGAIVTADRLLTVSKGYSWEITTVEG--------GYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHY 355 (576)
Q Consensus 284 ~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~--------~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~ 355 (576)
...++-.||.|-.-+....+.+.+.-. ..++ .+.....++.++|||||++.|.+....
T Consensus 177 ------il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~~--~~~g~~~~v~viP~GID~~~f~~~~~~------ 242 (456)
T TIGR02400 177 ------LLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNGV--ESGGRTVRVGAFPIGIDVDRFAEQAKK------ 242 (456)
T ss_pred ------HHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCCce--EECCcEEEEEEecCcCCHHHHHHHhcC------
Confidence 223344556665555544433321000 0000 011245578999999999888654311
Q ss_pred CcCCcccchHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--C----CcEEEEEeCC----ChhhH
Q 008154 356 SIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D----DIQFVMLGSG----DPQFE 425 (576)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~----~~~lii~G~g----~~~~~ 425 (576)
.+.......+++.++ +..+|+++||+++.||++.+++|++++.+ + ++.|+++|.. .+.+.
T Consensus 243 -----~~~~~~~~~lr~~~~-----~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~~~~ 312 (456)
T TIGR02400 243 -----PSVQKRIAELRESLK-----GRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQ 312 (456)
T ss_pred -----hhHHHHHHHHHHHcC-----CCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccCchHHH
Confidence 000111223444442 56799999999999999999999999864 2 3668877521 13344
Q ss_pred HHHHHHHHH---hcC--------ceEEEcc-CChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCc----eEEeCcc
Q 008154 426 SWMRDTEAT---YKD--------KYRGWVG-FNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTI----PVVHATG 489 (576)
Q Consensus 426 ~~~~~~~~~---~~~--------~~~~~~~-~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~p----vIat~~g 489 (576)
+..+.+.+. .+. .+..+.+ .+.+.+..+|+.||++|+||..|++|++++||||||+| +|+|+.+
T Consensus 313 ~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~ 392 (456)
T TIGR02400 313 QLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFA 392 (456)
T ss_pred HHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCC
Confidence 444444432 111 1233333 35667779999999999999999999999999999999 9999988
Q ss_pred ccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHH
Q 008154 490 GLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVF 565 (576)
Q Consensus 490 g~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y 565 (576)
|..+.+. +|++++|.|++++|++|.+++.. +++++.+++++. ...+||+...+++|++.+
T Consensus 393 G~~~~l~-------------~gllVnP~d~~~lA~aI~~aL~~---~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 454 (456)
T TIGR02400 393 GAAQELN-------------GALLVNPYDIDGMADAIARALTM---PLEEREERHRAMMDKLRKNDVQRWREDFLSDL 454 (456)
T ss_pred CChHHhC-------------CcEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 8877662 68999999999999999999873 444555555443 235799999999988654
No 81
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.91 E-value=5.5e-22 Score=204.69 Aligned_cols=332 Identities=15% Similarity=0.052 Sum_probs=209.6
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++.+.+ .||-.+.+..++++|.++||+|++++........ . ..
T Consensus 1 ~~~~~~~~------~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~~~---~--------------------------~~ 45 (350)
T cd03785 1 RILIAGGG------TGGHIFPALALAEELRERGAEVLFLGTKRGLEAR---L--------------------------VP 45 (350)
T ss_pred CEEEEecC------chhhhhHHHHHHHHHHhCCCEEEEEECCCcchhh---c--------------------------cc
Confidence 36666543 6899999999999999999999999875422100 0 00
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHH---HHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHH
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRY---TLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLA 223 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~ 223 (576)
..+++++.++.+.+.+.. .+ .....+ ........+.++.. +||+||+|....++...+..
T Consensus 46 ~~~~~~~~~~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~~i~~~--------~pDvI~~~~~~~~~~~~~~a 108 (350)
T cd03785 46 KAGIPLHTIPVGGLRRKG-SL--------KKLKAPFKLLKGVLQARKILKKF--------KPDVVVGFGGYVSGPVGLAA 108 (350)
T ss_pred ccCCceEEEEecCcCCCC-hH--------HHHHHHHHHHHHHHHHHHHHHhc--------CCCEEEECCCCcchHHHHHH
Confidence 135667766533221110 00 001111 11111222222222 79999999866554433333
Q ss_pred hhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceecc
Q 008154 224 SKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTV 303 (576)
Q Consensus 224 ~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~v 303 (576)
+. .++|++++.|+.. + . ...+...+.+|.++++
T Consensus 109 -~~------~~~p~v~~~~~~~-----~-----------~------------------------~~~~~~~~~~~~vi~~ 141 (350)
T cd03785 109 -KL------LGIPLVIHEQNAV-----P-----------G------------------------LANRLLARFADRVALS 141 (350)
T ss_pred -HH------hCCCEEEEcCCCC-----c-----------c------------------------HHHHHHHHhhCEEEEc
Confidence 33 4688887665421 0 0 0223345678999999
Q ss_pred CccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCC
Q 008154 304 SKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCP 383 (576)
Q Consensus 304 S~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 383 (576)
|+...+. ....++.+++||++.+.+.+.. . ++..+++ ++..
T Consensus 142 s~~~~~~---------------~~~~~~~~i~n~v~~~~~~~~~---------------------~-~~~~~~~--~~~~ 182 (350)
T cd03785 142 FPETAKY---------------FPKDKAVVTGNPVREEILALDR---------------------E-RARLGLR--PGKP 182 (350)
T ss_pred chhhhhc---------------CCCCcEEEECCCCchHHhhhhh---------------------h-HHhcCCC--CCCe
Confidence 8865432 2356889999999976554321 1 4556665 4667
Q ss_pred EEEEecccccccCHH-HHHHHHHhhhcCCcEE-EEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEE
Q 008154 384 LIGFIGRLDYQKGID-LIRLAAPEILADDIQF-VMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILL 461 (576)
Q Consensus 384 ~i~~~Gr~~~~Kg~~-~ll~a~~~L~~~~~~l-ii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v 461 (576)
++++.|+....|+.. +++++++.+.++++++ +++|++. .++..+.+++. ..++. +.++. +....+|+.||++|
T Consensus 183 ~i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g~--~~~l~~~~~~~-~~~v~-~~g~~-~~~~~~l~~ad~~v 257 (350)
T cd03785 183 TLLVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKGD--LEEVKKAYEEL-GVNYE-VFPFI-DDMAAAYAAADLVI 257 (350)
T ss_pred EEEEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCcc--HHHHHHHHhcc-CCCeE-Eeehh-hhHHHHHHhcCEEE
Confidence 787887766667764 5568888887556664 4678873 34444444332 33443 45554 34558999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEeCccc--------cccccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHHHH
Q 008154 462 MPSRFEPCGLNQLYAMRYGTIPVVHATGG--------LRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAIR 531 (576)
Q Consensus 462 ~ps~~E~~g~s~lEAma~G~pvIat~~gg--------~~e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~l~ 531 (576)
.++- +++++|||++|+|+|++..++ ..+.+.+ +++|++++++ |+++++++|.+++.
T Consensus 258 ~~sg----~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~----------~g~g~~v~~~~~~~~~l~~~i~~ll~ 323 (350)
T cd03785 258 SRAG----ASTVAELAALGLPAILIPLPYAADDHQTANARALVK----------AGAAVLIPQEELTPERLAAALLELLS 323 (350)
T ss_pred ECCC----HhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHh----------CCCEEEEecCCCCHHHHHHHHHHHhc
Confidence 8762 689999999999999987654 2345555 6799999886 89999999998875
Q ss_pred HhhhCHHHHHHHHHHHH--hhhCCHHHHHH
Q 008154 532 TYREHKSSWEGLMRRGM--EKDYTWENAAI 559 (576)
Q Consensus 532 ~~~~~~~~~~~~~~~a~--~~~fs~~~~~~ 559 (576)
|++.++++++++. .+.+..+++++
T Consensus 324 ----~~~~~~~~~~~~~~~~~~~~~~~i~~ 349 (350)
T cd03785 324 ----DPERLKAMAEAARSLARPDAAERIAD 349 (350)
T ss_pred ----CHHHHHHHHHHHHhcCCCCHHHHHHh
Confidence 7888888888773 34566665543
No 82
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.90 E-value=2.1e-21 Score=200.21 Aligned_cols=329 Identities=15% Similarity=0.061 Sum_probs=199.5
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 145 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (576)
|||++++.+ .||-...+.+++++|.++||+|++++....... .. .
T Consensus 1 ~~i~~~~g~------~~g~~~~~~~La~~L~~~g~eV~vv~~~~~~~~---~~--------------------------~ 45 (348)
T TIGR01133 1 KKVVLAAGG------TGGHIFPALAVAEELIKRGVEVLWLGTKRGLEK---RL--------------------------V 45 (348)
T ss_pred CeEEEEeCc------cHHHHhHHHHHHHHHHhCCCEEEEEeCCCcchh---cc--------------------------c
Confidence 688888653 244444667999999999999999985321100 00 0
Q ss_pred eecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHH---HHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHH
Q 008154 146 YREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRY---TLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLL 222 (576)
Q Consensus 146 ~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l 222 (576)
...|++++.++...+.+. .+. ...... ........+.++.. +|||||+|.+...+...+.
T Consensus 46 ~~~g~~~~~i~~~~~~~~-~~~--------~~l~~~~~~~~~~~~l~~~i~~~--------~pDvVi~~~~~~~~~~~~~ 108 (348)
T TIGR01133 46 PKAGIEFYFIPVGGLRRK-GSF--------RLIKTPLKLLKAVFQARRILKKF--------KPDAVIGFGGYVSGPAGLA 108 (348)
T ss_pred ccCCCceEEEeccCcCCC-ChH--------HHHHHHHHHHHHHHHHHHHHHhc--------CCCEEEEcCCcccHHHHHH
Confidence 113677776653222111 010 111111 11111222332222 7999999976655544443
Q ss_pred HhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceec
Q 008154 223 ASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLT 302 (576)
Q Consensus 223 ~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~ 302 (576)
.. . .++|+|++.|+.. + . ...+...+.+|.+++
T Consensus 109 ~~-~------~~~p~v~~~~~~~-----~-----------~------------------------~~~~~~~~~~d~ii~ 141 (348)
T TIGR01133 109 AK-L------LGIPLFHHEQNAV-----P-----------G------------------------LTNKLLSRFAKKVLI 141 (348)
T ss_pred HH-H------cCCCEEEECCCCC-----c-----------c------------------------HHHHHHHHHhCeeEE
Confidence 33 2 4678875433210 0 0 022344578999999
Q ss_pred cCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCC
Q 008154 303 VSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDC 382 (576)
Q Consensus 303 vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 382 (576)
+|+...+.+ +..+|+||++...+.+... ++.++++ ++.
T Consensus 142 ~~~~~~~~~------------------~~~~i~n~v~~~~~~~~~~----------------------~~~~~~~--~~~ 179 (348)
T TIGR01133 142 SFPGAKDHF------------------EAVLVGNPVRQEIRSLPVP----------------------RERFGLR--EGK 179 (348)
T ss_pred CchhHhhcC------------------CceEEcCCcCHHHhcccch----------------------hhhcCCC--CCC
Confidence 998655332 2379999998654433210 1235665 467
Q ss_pred CEEEEecccccccCHH-HHHHHHHhhhcCCcEEEE-EeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEE
Q 008154 383 PLIGFIGRLDYQKGID-LIRLAAPEILADDIQFVM-LGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDIL 460 (576)
Q Consensus 383 ~~i~~~Gr~~~~Kg~~-~ll~a~~~L~~~~~~lii-~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~ 460 (576)
++|+++|+....|++. .+++|++++.++++++++ +|+++ .+...+.+.+....+++.+. .. ....+|+.||++
T Consensus 180 ~~i~~~gg~~~~~~~~~~l~~a~~~l~~~~~~~~~~~g~~~--~~~l~~~~~~~~l~~~v~~~-~~--~~~~~l~~ad~~ 254 (348)
T TIGR01133 180 PTILVLGGSQGAKILNELVPKALAKLAEKGIQIVHQTGKND--LEKVKNVYQELGIEAIVTFI-DE--NMAAAYAAADLV 254 (348)
T ss_pred eEEEEECCchhHHHHHHHHHHHHHHHhhcCcEEEEECCcch--HHHHHHHHhhCCceEEecCc-cc--CHHHHHHhCCEE
Confidence 8899999887788865 456898888665666644 44442 24333333332112333333 22 345899999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEeCcccc-------ccccccccccccCCCCCcceeEeCCCC--HHHHHHHHHHHHH
Q 008154 461 LMPSRFEPCGLNQLYAMRYGTIPVVHATGGL-------RDTVENFNPFAREGSGEGTGWSFLPLS--EESMLTALRFAIR 531 (576)
Q Consensus 461 v~ps~~E~~g~s~lEAma~G~pvIat~~gg~-------~e~i~~~~~~~~~~~~~~~G~~~~~~d--~~~la~~i~~~l~ 531 (576)
|.++ + +++++|||++|+|+|+++.++. .+.+.+ +++|++++++| +++++++|.+++.
T Consensus 255 v~~~---g-~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~----------~~~G~~~~~~~~~~~~l~~~i~~ll~ 320 (348)
T TIGR01133 255 ISRA---G-ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLED----------LGAGLVIRQKELLPEKLLEALLKLLL 320 (348)
T ss_pred EECC---C-hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHH----------CCCEEEEecccCCHHHHHHHHHHHHc
Confidence 9864 2 6899999999999999987542 245655 78999998876 9999999998875
Q ss_pred HhhhCHHHHHHHHHHHH--hhhCCHHHHH
Q 008154 532 TYREHKSSWEGLMRRGM--EKDYTWENAA 558 (576)
Q Consensus 532 ~~~~~~~~~~~~~~~a~--~~~fs~~~~~ 558 (576)
|++.+.+|++++. .+....++++
T Consensus 321 ----~~~~~~~~~~~~~~~~~~~~~~~i~ 345 (348)
T TIGR01133 321 ----DPANLEAMAEAARKLAKPDAAKRIA 345 (348)
T ss_pred ----CHHHHHHHHHHHHhcCCccHHHHHH
Confidence 8888888888763 2344444444
No 83
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.89 E-value=8.8e-22 Score=219.59 Aligned_cols=303 Identities=16% Similarity=0.157 Sum_probs=202.7
Q ss_pred ccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhh-hhhcCCChhhhcc-cccccccccccccCC
Q 008154 205 KCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAAT-YKNLGLPSEWYGA-LEWVFPTWARTHALD 282 (576)
Q Consensus 205 pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 282 (576)
-|+|-+||.|..++|.+++++. +.+++.|..|.| ||... ++.+......+.. +...+-.|..
T Consensus 148 ~d~vWvhDYhL~llp~~lR~~~------~~~~igfFlHiP-----FPs~e~fr~lp~r~~il~gll~aDligF~t----- 211 (797)
T PLN03063 148 GDVVWCHDYHLMFLPQYLKEYN------NKMKVGWFLHTP-----FPSSEIYKTLPSRSELLRAVLTADLIGFHT----- 211 (797)
T ss_pred CCEEEEecchhhhHHHHHHHhC------CCCcEEEEecCC-----CCCHHHHhhCCCHHHHHHHHhcCCEEEeCC-----
Confidence 3899999999999999999876 789999999998 44333 3544433322221 1122211111
Q ss_pred cCccchhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCccc
Q 008154 283 TGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSG 362 (576)
Q Consensus 283 ~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~ 362 (576)
+...+..++.|+.+++++.... .+. +.....++.++|||||++.|.+..... .
T Consensus 212 ----~~y~r~Fl~~~~r~l~~~~~~~-~i~-----------~~gr~~~I~viP~GID~~~f~~~~~~~-----------~ 264 (797)
T PLN03063 212 ----YDFARHFLSACTRILGVEGTHE-GVV-----------DQGKVTRVAVFPIGIDPERFINTCELP-----------E 264 (797)
T ss_pred ----HHHHHHHHHHHHHHhCccccCC-ceE-----------ECCeEEEEEEEecccCHHHHHHHhcCh-----------h
Confidence 2344555566666666543211 111 122345689999999988775432110 0
Q ss_pred chHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CC----cEEEEEeCCC----hhhHHHHHHHH
Q 008154 363 KVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DD----IQFVMLGSGD----PQFESWMRDTE 432 (576)
Q Consensus 363 ~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~----~~lii~G~g~----~~~~~~~~~~~ 432 (576)
.......+++.++ +..+|+++||+++.||++.+++|++++.+ ++ +.|+.++... +.+++..+.+.
T Consensus 265 ~~~~~~~lr~~~~-----~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~ 339 (797)
T PLN03063 265 VKQHMKELKRFFA-----GRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVH 339 (797)
T ss_pred HHHHHHHHHHhcC-----CCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCCCchHHHHHHHHHHH
Confidence 0011122333332 56789999999999999999999999864 33 4455444211 23444444444
Q ss_pred HH---hcCce--------EEEc-cCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCc----eEEeCccccccccc
Q 008154 433 AT---YKDKY--------RGWV-GFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTI----PVVHATGGLRDTVE 496 (576)
Q Consensus 433 ~~---~~~~~--------~~~~-~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~p----vIat~~gg~~e~i~ 496 (576)
+. .+.++ ..+. ..+.+....+|+.||++|+||..|++|++++||||||+| +|.|..+|..+.+
T Consensus 340 ~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l- 418 (797)
T PLN03063 340 ELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSL- 418 (797)
T ss_pred HHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCchhhh-
Confidence 32 22221 1122 235566778999999999999999999999999999999 9999999988875
Q ss_pred cccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHhhh
Q 008154 497 NFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWASI 570 (576)
Q Consensus 497 ~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~~~~ 570 (576)
+.+|++++|.|++++|++|.+++.. ++++++++.++. ...+++|...++.+++.++++..
T Consensus 419 -----------~~~allVnP~D~~~lA~AI~~aL~m---~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~ 480 (797)
T PLN03063 419 -----------GAGALLVNPWNITEVSSAIKEALNM---SDEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIV 480 (797)
T ss_pred -----------cCCeEEECCCCHHHHHHHHHHHHhC---CHHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhh
Confidence 3579999999999999999999872 445555554444 45689999999999998887764
No 84
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.89 E-value=2.4e-21 Score=198.14 Aligned_cols=240 Identities=18% Similarity=0.174 Sum_probs=171.0
Q ss_pred HHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHH
Q 008154 293 AIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQK 372 (576)
Q Consensus 293 a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 372 (576)
....+|.+++.|..++..+.. .........+.+.+.++|.+.+.+.... .+...+...+.
T Consensus 206 ~~~~~~~~~~ns~~~~~~f~~--------~~~~L~~~d~~~~y~ei~~s~~~~~~~~------------~~~~~~~~~r~ 265 (495)
T KOG0853|consen 206 TTGLAWKILVNSYFTKRQFKA--------TFVSLSNSDITSTYPEIDGSWFTYGQYE------------SHLELRLPVRL 265 (495)
T ss_pred hhhccceEecchhhhhhhhhh--------hhhhcCCCCcceeeccccchhccccccc------------cchhcccccce
Confidence 446778888888877765432 2233444458899999997766642211 00000111222
Q ss_pred HcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc-------CCcEEEEEeCC--C-------hhhHHHHHHHHHH-h
Q 008154 373 ELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA-------DDIQFVMLGSG--D-------PQFESWMRDTEAT-Y 435 (576)
Q Consensus 373 ~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~-------~~~~lii~G~g--~-------~~~~~~~~~~~~~-~ 435 (576)
..+.. ........+.|+.+.|+++++++|+..+.. ...+++++|+. + ..+.++...+.+. +
T Consensus 266 ~~~v~--~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l 343 (495)
T KOG0853|consen 266 YRGVS--GIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDL 343 (495)
T ss_pred eeeec--ccceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCc
Confidence 22333 335778889999999999999999998865 25788888832 1 1233444444443 3
Q ss_pred cCceEEE-ccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEe
Q 008154 436 KDKYRGW-VGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSF 514 (576)
Q Consensus 436 ~~~~~~~-~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~ 514 (576)
.++++.+ ...+......+++.+.+.+.++..|+||++++|||+||+|||+|+.||..|++.+ +.+|+++
T Consensus 344 ~g~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~----------~~tG~l~ 413 (495)
T KOG0853|consen 344 LGQFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACGLPVVATNNGGPAEIVVH----------GVTGLLI 413 (495)
T ss_pred cCceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcCCCEEEecCCCceEEEEc----------CCcceee
Confidence 3455555 4445555567888999998888889999999999999999999999999999999 9999999
Q ss_pred CCCCHH---HHHHHHHHHHHHhhhCHHHHHHHHHHH---HhhhCCHHHHHHHHHHHHHHhh
Q 008154 515 LPLSEE---SMLTALRFAIRTYREHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFEWAS 569 (576)
Q Consensus 515 ~~~d~~---~la~~i~~~l~~~~~~~~~~~~~~~~a---~~~~fs~~~~~~~y~~~y~~~~ 569 (576)
+| +.+ .+|+++.++.. |++.|.+|++++ +.+.|||..+.+++.+......
T Consensus 414 dp-~~e~~~~~a~~~~kl~~----~p~l~~~~~~~G~~rV~e~fs~~~~~~ri~~~~~~~~ 469 (495)
T KOG0853|consen 414 DP-GQEAVAELADALLKLRR----DPELWARMGKNGLKRVKEMFSWQHYSERIASVLGKYL 469 (495)
T ss_pred CC-chHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhHhcC
Confidence 99 444 57777777764 999999999998 5678999999998888776543
No 85
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.87 E-value=5.5e-20 Score=194.85 Aligned_cols=234 Identities=13% Similarity=0.080 Sum_probs=158.2
Q ss_pred hHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHH
Q 008154 289 VLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKI 368 (576)
Q Consensus 289 ~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 368 (576)
+.+..++.+|.++++|+..++.+.+ ++.+.. +.+++|+ +.+.+.+... .....
T Consensus 171 ~~r~~~~~~d~ii~~S~~~~~~l~~----------~g~~~~-i~vi~n~-~~d~~~~~~~---------------~~~~~ 223 (425)
T PRK05749 171 FYRLLFKNIDLVLAQSEEDAERFLA----------LGAKNE-VTVTGNL-KFDIEVPPEL---------------AARAA 223 (425)
T ss_pred HHHHHHHhCCEEEECCHHHHHHHHH----------cCCCCC-cEecccc-cccCCCChhh---------------HHHHH
Confidence 4566778899999999998877632 233344 7888885 2222221110 01134
Q ss_pred HHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCce-------
Q 008154 369 ALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKY------- 439 (576)
Q Consensus 369 ~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~------- 439 (576)
.+++.++ + +..+++++|+. .|+.+.+++|++.+.+ ++++|+|+|+|+...++..+.+++. ....
T Consensus 224 ~~r~~~~-~---~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~~liivG~g~~r~~~l~~~~~~~-gl~~~~~~~~~ 296 (425)
T PRK05749 224 TLRRQLA-P---NRPVWIAASTH--EGEEELVLDAHRALLKQFPNLLLILVPRHPERFKEVEELLKKA-GLSYVRRSQGE 296 (425)
T ss_pred HHHHHhc-C---CCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCcEEEEcCCChhhHHHHHHHHHhC-CCcEEEccCCC
Confidence 4566665 3 45778888874 5789999999999865 6899999999853324444444432 2111
Q ss_pred -------EEEccCChhHHHHHHhcCCEEEe-CCCCCCCcHHHHHHHHcCCceEEeCc-cccccccccccccccCCCCCcc
Q 008154 440 -------RGWVGFNVPISHRITAGCDILLM-PSRFEPCGLNQLYAMRYGTIPVVHAT-GGLRDTVENFNPFAREGSGEGT 510 (576)
Q Consensus 440 -------~~~~~~~~~~~~~ll~~~Dv~v~-ps~~E~~g~s~lEAma~G~pvIat~~-gg~~e~i~~~~~~~~~~~~~~~ 510 (576)
+.+.+. ...+..+|+.||+++. +|..|++|.+++|||+||+|||++.. ++..|.+... ..+
T Consensus 297 ~~~~~~~v~l~~~-~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~---------~~~ 366 (425)
T PRK05749 297 PPSADTDVLLGDT-MGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERL---------LQA 366 (425)
T ss_pred CCCCCCcEEEEec-HHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHH---------HHC
Confidence 222222 2356689999999655 67679999999999999999999764 6666766540 146
Q ss_pred eeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhh
Q 008154 511 GWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASI 570 (576)
Q Consensus 511 G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y~~~~~ 570 (576)
|+++.++|+++++++|.+++. |++.+.+|++++.+.--+....++++.+.+...+.
T Consensus 367 g~~~~~~d~~~La~~l~~ll~----~~~~~~~m~~~a~~~~~~~~~~~~~~~~~l~~~l~ 422 (425)
T PRK05749 367 GAAIQVEDAEDLAKAVTYLLT----DPDARQAYGEAGVAFLKQNQGALQRTLQLLEPYLP 422 (425)
T ss_pred CCeEEECCHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHhcc
Confidence 888888899999999999875 88899999988732111113566777777766543
No 86
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=99.87 E-value=5.5e-21 Score=213.81 Aligned_cols=302 Identities=18% Similarity=0.194 Sum_probs=195.8
Q ss_pred ccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhh-hhhcCCChhhhc-ccccccccccccccCC
Q 008154 205 KCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAAT-YKNLGLPSEWYG-ALEWVFPTWARTHALD 282 (576)
Q Consensus 205 pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 282 (576)
-|+|.+||.|..++|.+++++. +..++-|..|.+ ||... ++.+......+. .+...+..|.+
T Consensus 134 ~d~vwvhDYhl~l~p~~lr~~~------~~~~igfFlH~p-----fP~~~~f~~lp~~~~ll~~ll~~Dligf~t----- 197 (726)
T PRK14501 134 GDVVWVHDYQLMLLPAMLRERL------PDARIGFFLHIP-----FPSFEVFRLLPWREEILEGLLGADLIGFHT----- 197 (726)
T ss_pred CCEEEEeCchhhhHHHHHHhhC------CCCcEEEEeeCC-----CCChHHHhhCCChHHHHHHHhcCCeEEeCC-----
Confidence 4899999999999999998875 788999999998 33333 244443222222 12222222211
Q ss_pred cCccchhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCccc
Q 008154 283 TGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSG 362 (576)
Q Consensus 283 ~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~ 362 (576)
....+..++.|..+.+.... ...+ .+.....++.++|||||++.|.+..... .
T Consensus 198 ----~~~~r~Fl~~~~~~l~~~~~-~~~~-----------~~~gr~~~v~v~p~GID~~~f~~~~~~~-----------~ 250 (726)
T PRK14501 198 ----YDYVRHFLSSVLRVLGYETE-LGEI-----------RLGGRIVRVDAFPMGIDYDKFHNSAQDP-----------E 250 (726)
T ss_pred ----HHHHHHHHHHHHHHcCCccC-CCeE-----------EECCEEEEEEEEECeEcHHHHHHHhcCc-----------h
Confidence 12333334444444442211 1111 0111234689999999998886542110 0
Q ss_pred chHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--C----CcEEEEEeCC----ChhhHHHHHHHH
Q 008154 363 KVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D----DIQFVMLGSG----DPQFESWMRDTE 432 (576)
Q Consensus 363 ~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~----~~~lii~G~g----~~~~~~~~~~~~ 432 (576)
.......+++.. ++..+|+++||+++.||+..+++|++++.+ + +++|+++|.+ -+.+.+..+.+.
T Consensus 251 ~~~~~~~lr~~~-----~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~ 325 (726)
T PRK14501 251 VQEEIRRLRQDL-----RGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREID 325 (726)
T ss_pred HHHHHHHHHHHc-----CCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcchHHHHHHHHHHH
Confidence 001112233332 256799999999999999999999999865 3 3789988733 133444444443
Q ss_pred HH---hcC--------ceEEEcc-CChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHc-----CCceEEeCcccccccc
Q 008154 433 AT---YKD--------KYRGWVG-FNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRY-----GTIPVVHATGGLRDTV 495 (576)
Q Consensus 433 ~~---~~~--------~~~~~~~-~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~-----G~pvIat~~gg~~e~i 495 (576)
+. .++ .++.+.+ .+.+....+|+.||++++||..|++|++++||||| |.||++...|+..++.
T Consensus 326 ~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~ 405 (726)
T PRK14501 326 ELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAELA 405 (726)
T ss_pred HHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCceEEEecccchhHHhC
Confidence 32 111 1333333 46667779999999999999999999999999999 5577777788777653
Q ss_pred ccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHhhhC
Q 008154 496 ENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWASID 571 (576)
Q Consensus 496 ~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~~~~~ 571 (576)
.|++++|.|++++|++|.+++... ++.+.+.++++ ...+|||+.++++|++.|.++..+
T Consensus 406 --------------~~llv~P~d~~~la~ai~~~l~~~---~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~~~~~ 466 (726)
T PRK14501 406 --------------EALLVNPNDIEGIAAAIKRALEMP---EEEQRERMQAMQERLRRYDVHKWASDFLDELREAAEK 466 (726)
T ss_pred --------------cCeEECCCCHHHHHHHHHHHHcCC---HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 388999999999999999998632 22223233333 246899999999999999988543
No 87
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.87 E-value=8.9e-20 Score=190.40 Aligned_cols=219 Identities=10% Similarity=0.075 Sum_probs=149.5
Q ss_pred HhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHc
Q 008154 295 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKEL 374 (576)
Q Consensus 295 ~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 374 (576)
+.+|.++++|+...+.+.+ .+.+.+++.++.|.++. .|.+... ....++.+
T Consensus 146 ~~ad~i~~~s~~~~~~l~~----------~gi~~~ki~v~G~p~~~-~f~~~~~------------------~~~~~~~~ 196 (380)
T PRK13609 146 REVDRYFVATDHVKKVLVD----------IGVPPEQVVETGIPIRS-SFELKIN------------------PDIIYNKY 196 (380)
T ss_pred CCCCEEEECCHHHHHHHHH----------cCCChhHEEEECcccCh-HHcCcCC------------------HHHHHHHc
Confidence 5789999999988776532 23455677777666542 2322111 23467778
Q ss_pred CCCCCCCC-CEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHH
Q 008154 375 GLPIRPDC-PLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRI 453 (576)
Q Consensus 375 ~i~~~~~~-~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 453 (576)
+++ ++. .++++.|++...|++..+++++... ++++++++|..++...+..+...+....++. +.++.++ ...+
T Consensus 197 ~l~--~~~~~il~~~G~~~~~k~~~~li~~l~~~--~~~~~viv~G~~~~~~~~l~~~~~~~~~~v~-~~g~~~~-~~~l 270 (380)
T PRK13609 197 QLC--PNKKILLIMAGAHGVLGNVKELCQSLMSV--PDLQVVVVCGKNEALKQSLEDLQETNPDALK-VFGYVEN-IDEL 270 (380)
T ss_pred CCC--CCCcEEEEEcCCCCCCcCHHHHHHHHhhC--CCcEEEEEeCCCHHHHHHHHHHHhcCCCcEE-EEechhh-HHHH
Confidence 887 343 4566678998899999999988653 5789888754333233333333333333444 4466544 4579
Q ss_pred HhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeC-ccccc----cccccccccccCCCCCcceeEeCCCCHHHHHHHHHH
Q 008154 454 TAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA-TGGLR----DTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRF 528 (576)
Q Consensus 454 l~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~-~gg~~----e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~ 528 (576)
++.||+++. ++.|++++|||++|+|+|+++ .+|.. +.+. ++|+.+...|+++++++|.+
T Consensus 271 ~~~aD~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~------------~~G~~~~~~~~~~l~~~i~~ 334 (380)
T PRK13609 271 FRVTSCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFE------------RKGAAVVIRDDEEVFAKTEA 334 (380)
T ss_pred HHhccEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHH------------hCCcEEEECCHHHHHHHHHH
Confidence 999999884 567999999999999999986 45432 1222 24555556789999998888
Q ss_pred HHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHh
Q 008154 529 AIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWA 568 (576)
Q Consensus 529 ~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~~ 568 (576)
++. |++.+++|++++ +...++++++++.+.+.++..
T Consensus 335 ll~----~~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 335 LLQ----DDMKLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred HHC----CHHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 875 788888888876 455789999999999887654
No 88
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.86 E-value=7.8e-21 Score=175.25 Aligned_cols=165 Identities=25% Similarity=0.315 Sum_probs=132.5
Q ss_pred HHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhh---cCCcEEEEEeCCChhhHHHHHHHHH-HhcCceEEE
Q 008154 367 KIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEIL---ADDIQFVMLGSGDPQFESWMRDTEA-TYKDKYRGW 442 (576)
Q Consensus 367 ~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~---~~~~~lii~G~g~~~~~~~~~~~~~-~~~~~~~~~ 442 (576)
++.++...+.+ .+.++|+++||+.+.||++.+++|+..+. .+++.++|+|+++. .......+.. ....++.+.
T Consensus 2 ~~~~~~~~~~~--~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~-~~~~~~~~~~~~~~~~i~~~ 78 (172)
T PF00534_consen 2 KDKLREKLKIP--DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEY-KKELKNLIEKLNLKENIIFL 78 (172)
T ss_dssp HHHHHHHTTT---TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCH-HHHHHHHHHHTTCGTTEEEE
T ss_pred hHHHHHHcCCC--CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEccccc-cccccccccccccccccccc
Confidence 45667777766 67899999999999999999999999986 47999999997752 2333333332 233456555
Q ss_pred ccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHH
Q 008154 443 VGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESM 522 (576)
Q Consensus 443 ~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~l 522 (576)
...+.+....+++.||++++||.+|++|++++|||++|+|||+++.|+..|.+.+ +.+|+++++.|++++
T Consensus 79 ~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~----------~~~g~~~~~~~~~~l 148 (172)
T PF00534_consen 79 GYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIIND----------GVNGFLFDPNDIEEL 148 (172)
T ss_dssp ESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGT----------TTSEEEESTTSHHHH
T ss_pred ccccccccccccccceeccccccccccccccccccccccceeeccccCCceeecc----------ccceEEeCCCCHHHH
Confidence 4445566778999999999999999999999999999999999999999999998 889999999999999
Q ss_pred HHHHHHHHHHhhhCHHHHHHHHHHHH
Q 008154 523 LTALRFAIRTYREHKSSWEGLMRRGM 548 (576)
Q Consensus 523 a~~i~~~l~~~~~~~~~~~~~~~~a~ 548 (576)
+++|.+++. +++.+..|++++.
T Consensus 149 ~~~i~~~l~----~~~~~~~l~~~~~ 170 (172)
T PF00534_consen 149 ADAIEKLLN----DPELRQKLGKNAR 170 (172)
T ss_dssp HHHHHHHHH----HHHHHHHHHHHHH
T ss_pred HHHHHHHHC----CHHHHHHHHHHhc
Confidence 999999987 6677888887753
No 89
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.84 E-value=1.2e-18 Score=181.10 Aligned_cols=222 Identities=15% Similarity=0.146 Sum_probs=152.4
Q ss_pred hhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhH
Q 008154 288 NVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCK 367 (576)
Q Consensus 288 ~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 367 (576)
.+++.+++.||.|+++|+...+.+.. ...++.+||||+|.+.|.+.....
T Consensus 145 ~~e~~~~~~ad~vi~~S~~l~~~~~~-------------~~~~i~~i~ngvd~~~f~~~~~~~----------------- 194 (373)
T cd04950 145 EAERRLLKRADLVFTTSPSLYEAKRR-------------LNPNVVLVPNGVDYEHFAAARDPP----------------- 194 (373)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHhh-------------CCCCEEEcccccCHHHhhcccccC-----------------
Confidence 36788899999999999988765531 226789999999998886543210
Q ss_pred HHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCCh
Q 008154 368 IALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNV 447 (576)
Q Consensus 368 ~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (576)
...+.... .+.++++|+|++.+.++++++.++++. .++++|+|+|.++.. .. ...+. ...++.+....+.
T Consensus 195 ~~~~~~~~----~~~~~i~y~G~l~~~~d~~ll~~la~~--~p~~~~vliG~~~~~-~~-~~~~~--~~~nV~~~G~~~~ 264 (373)
T cd04950 195 PPPADLAA----LPRPVIGYYGAIAEWLDLELLEALAKA--RPDWSFVLIGPVDVS-ID-PSALL--RLPNVHYLGPKPY 264 (373)
T ss_pred CChhHHhc----CCCCEEEEEeccccccCHHHHHHHHHH--CCCCEEEEECCCcCc-cC-hhHhc--cCCCEEEeCCCCH
Confidence 00011111 356899999999998888777665543 368999999998321 11 11111 1235544433355
Q ss_pred hHHHHHHhcCCEEEeCCCC-----CCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHH
Q 008154 448 PISHRITAGCDILLMPSRF-----EPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESM 522 (576)
Q Consensus 448 ~~~~~ll~~~Dv~v~ps~~-----E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~l 522 (576)
+.+..+++++|++++|+.. +.+|++++||||||+|||+|+.+ +.... ...+++ .++|++++
T Consensus 265 ~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~---~~~~~----------~~~~~~-~~~d~~~~ 330 (373)
T cd04950 265 KELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLP---EVRRY----------EDEVVL-IADDPEEF 330 (373)
T ss_pred HHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcH---HHHhh----------cCcEEE-eCCCHHHH
Confidence 6677899999999999863 36799999999999999999854 44443 333444 45689999
Q ss_pred HHHHHHHHHHhhhCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHH
Q 008154 523 LTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEW 567 (576)
Q Consensus 523 a~~i~~~l~~~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y~~ 567 (576)
+++|.+++.. ++++...+ .++ +++.+||++.++++.+..++
T Consensus 331 ~~ai~~~l~~--~~~~~~~~-~~~-~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 331 VAAIEKALLE--DGPARERR-RLR-LAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred HHHHHHHHhc--CCchHHHH-HHH-HHHHCCHHHHHHHHHHHHHh
Confidence 9999998652 12222222 222 67889999999999966543
No 90
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.83 E-value=8.5e-19 Score=168.35 Aligned_cols=118 Identities=26% Similarity=0.282 Sum_probs=92.8
Q ss_pred EecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccC-ChhHHHHHHhcCCEEEeC
Q 008154 387 FIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRITAGCDILLMP 463 (576)
Q Consensus 387 ~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~Dv~v~p 463 (576)
++|++.+.||++.+++++..+.+ ++++++++|.+++...............++.....+ ..+....++++||++++|
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~di~l~~ 188 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPEREYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADVFVLP 188 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCChHHHHHHHHhcCCcccEEEeCCCCcHHHHHHHhhcCCEEEec
Confidence 99999999999999999999976 489999999986432221111122333455544433 345555677779999999
Q ss_pred CCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEe
Q 008154 464 SRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSF 514 (576)
Q Consensus 464 s~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~ 514 (576)
|..|++|++++|||++|+|+|+|+.++..|.+.+ +.+|+++
T Consensus 189 ~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~----------~~~g~~~ 229 (229)
T cd01635 189 SLREGFGLVVLEAMACGLPVIATDVGGPPEIVED----------GLTGLLV 229 (229)
T ss_pred ccccCcChHHHHHHhCCCCEEEcCCCCcceEEEC----------CCceEEC
Confidence 9999999999999999999999999999999887 7888864
No 91
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.83 E-value=7.3e-18 Score=160.77 Aligned_cols=296 Identities=15% Similarity=0.119 Sum_probs=201.0
Q ss_pred CccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCc
Q 008154 204 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDT 283 (576)
Q Consensus 204 ~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (576)
.|||+.-.-+.+.-.|.+.. . .++|++..+|-|. ...+|...+ +.+....+..|++. .+
T Consensus 150 ~Pdi~IDtMGY~fs~p~~r~--l------~~~~V~aYvHYP~----iS~DML~~l------~qrq~s~~l~~~Kl---aY 208 (465)
T KOG1387|consen 150 PPDIFIDTMGYPFSYPIFRR--L------RRIPVVAYVHYPT----ISTDMLKKL------FQRQKSGILVWGKL---AY 208 (465)
T ss_pred CchheEecCCCcchhHHHHH--H------ccCceEEEEeccc----ccHHHHHHH------HhhhhcchhhhHHH---HH
Confidence 79998754343333344433 2 4799999999764 223343222 11111123333332 11
Q ss_pred Cccchh-HHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCccc
Q 008154 284 GEAVNV-LKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSG 362 (576)
Q Consensus 284 ~~~~~~-~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~ 362 (576)
...|.. ...+-..||.+.+.|.++.+.+. +.++. .++.+|+...+++.
T Consensus 209 ~rlFa~lY~~~G~~ad~vm~NssWT~nHI~---------qiW~~--~~~~iVyPPC~~e~-------------------- 257 (465)
T KOG1387|consen 209 WRLFALLYQSAGSKADIVMTNSSWTNNHIK---------QIWQS--NTCSIVYPPCSTED-------------------- 257 (465)
T ss_pred HHHHHHHHHhccccceEEEecchhhHHHHH---------HHhhc--cceeEEcCCCCHHH--------------------
Confidence 222333 33455689999999999998874 34454 45566766666442
Q ss_pred chHhHHHHHHHcCCCCCCCCCEEEEecccccccCHH-HHHHHHHhhhc------CCcEEEEEeCC-ChhhHHHHHHHHH-
Q 008154 363 KVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGID-LIRLAAPEILA------DDIQFVMLGSG-DPQFESWMRDTEA- 433 (576)
Q Consensus 363 ~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~-~ll~a~~~L~~------~~~~lii~G~g-~~~~~~~~~~~~~- 433 (576)
+++..+- .+.+...++++|.+.|+|++. +-++|+..... .+++|+|+|+- ..++++..+.++.
T Consensus 258 -------lks~~~t-e~~r~~~ll~l~Q~RPEKnH~~Lql~Al~~~~~pl~a~~~~iKL~ivGScRneeD~ervk~Lkd~ 329 (465)
T KOG1387|consen 258 -------LKSKFGT-EGERENQLLSLAQFRPEKNHKILQLFALYLKNEPLEASVSPIKLIIVGSCRNEEDEERVKSLKDL 329 (465)
T ss_pred -------HHHHhcc-cCCcceEEEEEeecCcccccHHHHHHHHHHhcCchhhccCCceEEEEeccCChhhHHHHHHHHHH
Confidence 2333332 224668899999999999999 44455544333 47999999985 2345555555543
Q ss_pred --H--hcCceEEEccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccc-cccccccccccCCCCC
Q 008154 434 --T--YKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLR-DTVENFNPFAREGSGE 508 (576)
Q Consensus 434 --~--~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~-e~i~~~~~~~~~~~~~ 508 (576)
. .+.++.+..+.+-+.+..+++.|.+.|++-..|.||++++|+||+|...|+.+.||.. |++.+++ +.
T Consensus 330 a~~L~i~~~v~F~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~-------G~ 402 (465)
T KOG1387|consen 330 AEELKIPKHVQFEKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWD-------GE 402 (465)
T ss_pred HHhcCCccceEEEecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccC-------Cc
Confidence 2 3456666666665666689999999999999999999999999999999999998877 7777643 35
Q ss_pred cceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHH--hhhCCHHHHHHHHHHHHHHhhhC
Q 008154 509 GTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGM--EKDYTWENAAIQYEQVFEWASID 571 (576)
Q Consensus 509 ~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a~--~~~fs~~~~~~~y~~~y~~~~~~ 571 (576)
.+|++.+ +.++.|+++.+++. .+.+.+..+.+++. ..+|+-.++-+.+.+.+..++..
T Consensus 403 ~tGFla~--t~~EYaE~iLkIv~---~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~kll~e 462 (465)
T KOG1387|consen 403 TTGFLAP--TDEEYAEAILKIVK---LNYDERNMMRRNARKSLARFGELKFDKDWENPICKLLEE 462 (465)
T ss_pred cceeecC--ChHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHHhhcc
Confidence 6899973 67788999999987 46776777777663 46899999999999988888764
No 92
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=99.81 E-value=4.9e-18 Score=177.72 Aligned_cols=310 Identities=15% Similarity=0.100 Sum_probs=194.0
Q ss_pred ccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChh-hhhhcCCChhhhc-ccccccccccccccCC
Q 008154 205 KCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAA-TYKNLGLPSEWYG-ALEWVFPTWARTHALD 282 (576)
Q Consensus 205 pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 282 (576)
-|+|-+||.|..++|.+++++. +..++-|..|.| ||.. .++.+......+. .+...+..|.+
T Consensus 133 ~d~vWVhDYhL~llp~~LR~~~------~~~~IgfFlHiP-----FPs~eifr~LP~r~~ll~glL~aDliGFqt----- 196 (487)
T TIGR02398 133 GATVWVHDYNLWLVPGYIRQLR------PDLKIAFFHHTP-----FPSADVFNILPWREQIIGSLLCCDYIGFHI----- 196 (487)
T ss_pred CCEEEEecchhhHHHHHHHHhC------CCCeEEEEeeCC-----CCChHHHhhCCchHHHHHHHhcCCeEEeCC-----
Confidence 4899999999999999999876 678999999998 4433 3355543333322 12222222211
Q ss_pred cCccchhHHHHHHhccceeccCccchhhhccc--cCCc-----chhh--hhhccCCceeEecCCCCCCCCCCCCCccccc
Q 008154 283 TGEAVNVLKGAIVTADRLLTVSKGYSWEITTV--EGGY-----GLHE--ILSSRKSVLNGITNGIDITEWNPSSDEHIAS 353 (576)
Q Consensus 283 ~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~--~~~~-----~l~~--~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~ 353 (576)
....+..+..|..+.+............ ..+. ..+. .+.....++.++|.|||++.|.+....
T Consensus 197 ----~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~---- 268 (487)
T TIGR02398 197 ----PRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAA---- 268 (487)
T ss_pred ----HHHHHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHHHHHHHhcC----
Confidence 1111222222222222111000000000 0000 0000 001223458999999999888543211
Q ss_pred cCCcCCcccchHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--C----CcEEEEEeCCC----hh
Q 008154 354 HYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D----DIQFVMLGSGD----PQ 423 (576)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~----~~~lii~G~g~----~~ 423 (576)
.+.......+++.++ +..+|++++|++..||+...++|++++.+ + ++.|+++|.+. +.
T Consensus 269 -------~~~~~~~~~lr~~~~-----~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr~~v~~ 336 (487)
T TIGR02398 269 -------ASIREMMERIRSELA-----GVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAASGMTI 336 (487)
T ss_pred -------chHHHHHHHHHHHcC-----CceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCcccchH
Confidence 011122345666665 56799999999999999999999999855 3 57999998763 33
Q ss_pred hHHHHHHHHH---HhcC--------ceEEEcc-CChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCC----ceEEeC
Q 008154 424 FESWMRDTEA---TYKD--------KYRGWVG-FNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGT----IPVVHA 487 (576)
Q Consensus 424 ~~~~~~~~~~---~~~~--------~~~~~~~-~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~----pvIat~ 487 (576)
+.+..+++.+ ..++ .+..+.+ .+.+....+|+.|||++.||..|+++++..|++||+. |+|.|.
T Consensus 337 y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSe 416 (487)
T TIGR02398 337 YDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQGLLDGVLVLSE 416 (487)
T ss_pred HHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECccccccCcchhhHHhhhcCCCCCEEEec
Confidence 4444444433 2211 1233333 4667777899999999999999999999999999988 999999
Q ss_pred ccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHH
Q 008154 488 TGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVF 565 (576)
Q Consensus 488 ~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y 565 (576)
.+|..+.+ ..+++++|.|++++|++|.+++.... +++++..++. ....++...-++.+++..
T Consensus 417 faGaa~~l-------------~~AllVNP~d~~~~A~ai~~AL~m~~---~Er~~R~~~l~~~v~~~d~~~W~~~fl~~l 480 (487)
T TIGR02398 417 FAGAAVEL-------------KGALLTNPYDPVRMDETIYVALAMPK---AEQQARMREMFDAVNYYDVQRWADEFLAAV 480 (487)
T ss_pred cccchhhc-------------CCCEEECCCCHHHHHHHHHHHHcCCH---HHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 99888655 35899999999999999999998532 2333222222 235678877777777654
Q ss_pred H
Q 008154 566 E 566 (576)
Q Consensus 566 ~ 566 (576)
.
T Consensus 481 ~ 481 (487)
T TIGR02398 481 S 481 (487)
T ss_pred h
Confidence 3
No 93
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.81 E-value=6.2e-18 Score=176.34 Aligned_cols=215 Identities=14% Similarity=0.108 Sum_probs=151.6
Q ss_pred HhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHc
Q 008154 295 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKEL 374 (576)
Q Consensus 295 ~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 374 (576)
+.+|.++++|+...+++.. .+.+.+++.+++++++...+.+.. . +..+++.+
T Consensus 149 ~~~d~~~~~s~~~~~~l~~----------~g~~~~ki~v~g~~v~~~f~~~~~-~-----------------~~~~r~~~ 200 (382)
T PLN02605 149 KGVTRCFCPSEEVAKRALK----------RGLEPSQIRVYGLPIRPSFARAVR-P-----------------KDELRREL 200 (382)
T ss_pred CCCCEEEECCHHHHHHHHH----------cCCCHHHEEEECcccCHhhccCCC-C-----------------HHHHHHHc
Confidence 5789999999988876542 244567899999999854333222 1 45678899
Q ss_pred CCCCCCCCCEEEEecccccccCHHHHHHHHHhhh------cCCcE-EEEEeCCChhhHHHHHHHHHHhcCceEEEccCCh
Q 008154 375 GLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEIL------ADDIQ-FVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNV 447 (576)
Q Consensus 375 ~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~------~~~~~-lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (576)
|++ ++.++|+++|+....|++..+++++..+. .++.+ ++++|++. ...+..+... ...++ .+.|+.+
T Consensus 201 gl~--~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~-~~~~~L~~~~--~~~~v-~~~G~~~ 274 (382)
T PLN02605 201 GMD--EDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNK-KLQSKLESRD--WKIPV-KVRGFVT 274 (382)
T ss_pred CCC--CCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCH-HHHHHHHhhc--ccCCe-EEEeccc
Confidence 998 57889999999999999999999998753 24565 56777763 2222222221 12233 3455544
Q ss_pred hHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCc------cccccccccccccccCCCCCcceeEeCCCCHHH
Q 008154 448 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT------GGLRDTVENFNPFAREGSGEGTGWSFLPLSEES 521 (576)
Q Consensus 448 ~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~------gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~ 521 (576)
+ +..+|+.||++|.++ .|.+++|||+||+|+|+++. |+. +.+.+ ++.|+.. +|+++
T Consensus 275 ~-~~~l~~aaDv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~-~~i~~----------~g~g~~~--~~~~~ 336 (382)
T PLN02605 275 N-MEEWMGACDCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNV-PYVVD----------NGFGAFS--ESPKE 336 (382)
T ss_pred c-HHHHHHhCCEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhH-HHHHh----------CCceeec--CCHHH
Confidence 4 568999999999865 58899999999999999984 333 33333 4566654 68999
Q ss_pred HHHHHHHHHHHhhhCHHHHHHHHHHHH--hhhCCHHHHHHHHHHH
Q 008154 522 MLTALRFAIRTYREHKSSWEGLMRRGM--EKDYTWENAAIQYEQV 564 (576)
Q Consensus 522 la~~i~~~l~~~~~~~~~~~~~~~~a~--~~~fs~~~~~~~y~~~ 564 (576)
++++|.+++. ++++.+++|++++. ....+.+++++.+.+.
T Consensus 337 la~~i~~ll~---~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~ 378 (382)
T PLN02605 337 IARIVAEWFG---DKSDELEAMSENALKLARPEAVFDIVHDLHEL 378 (382)
T ss_pred HHHHHHHHHc---CCHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Confidence 9999999986 23888888888763 3467777777776654
No 94
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.79 E-value=4.8e-17 Score=169.92 Aligned_cols=219 Identities=13% Similarity=0.146 Sum_probs=149.3
Q ss_pred HhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHc
Q 008154 295 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKEL 374 (576)
Q Consensus 295 ~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 374 (576)
+.+|.+++.|+..++.+.. .+.+..++.++.|+++. .|..... +..+++.+
T Consensus 146 ~~~d~~~v~s~~~~~~l~~----------~gi~~~ki~v~GiPv~~-~f~~~~~------------------~~~~~~~~ 196 (391)
T PRK13608 146 PYSTRYYVATKETKQDFID----------VGIDPSTVKVTGIPIDN-KFETPID------------------QKQWLIDN 196 (391)
T ss_pred CCCCEEEECCHHHHHHHHH----------cCCCHHHEEEECeecCh-Hhccccc------------------HHHHHHHc
Confidence 5789999999988776532 13355678888777763 3332211 34566778
Q ss_pred CCCCCCCC-CEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhh-HHHHHHHHHHhcCceEEEccCChhHHHH
Q 008154 375 GLPIRPDC-PLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQF-ESWMRDTEATYKDKYRGWVGFNVPISHR 452 (576)
Q Consensus 375 ~i~~~~~~-~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (576)
+++ ++. .++++.|++...|+++.+++++.+. .+++++++++..++.. ++..+... ...++ .+.|+.++ +..
T Consensus 197 ~l~--~~~~~ilv~~G~lg~~k~~~~li~~~~~~-~~~~~~vvv~G~~~~l~~~l~~~~~--~~~~v-~~~G~~~~-~~~ 269 (391)
T PRK13608 197 NLD--PDKQTILMSAGAFGVSKGFDTMITDILAK-SANAQVVMICGKSKELKRSLTAKFK--SNENV-LILGYTKH-MNE 269 (391)
T ss_pred CCC--CCCCEEEEECCCcccchhHHHHHHHHHhc-CCCceEEEEcCCCHHHHHHHHHHhc--cCCCe-EEEeccch-HHH
Confidence 887 344 4566789999899999999986432 2578887665433222 22222221 12233 35566544 568
Q ss_pred HHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCc-cccccc-----cccccccccCCCCCcceeEeCCCCHHHHHHHH
Q 008154 453 ITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT-GGLRDT-----VENFNPFAREGSGEGTGWSFLPLSEESMLTAL 526 (576)
Q Consensus 453 ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~-gg~~e~-----i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i 526 (576)
+++.||++|. ++.|+|+.|||++|+|+|+++. +| .|. +.+ .+.|+. .+|+++++++|
T Consensus 270 ~~~~aDl~I~----k~gg~tl~EA~a~G~PvI~~~~~pg-qe~~N~~~~~~----------~G~g~~--~~~~~~l~~~i 332 (391)
T PRK13608 270 WMASSQLMIT----KPGGITISEGLARCIPMIFLNPAPG-QELENALYFEE----------KGFGKI--ADTPEEAIKIV 332 (391)
T ss_pred HHHhhhEEEe----CCchHHHHHHHHhCCCEEECCCCCC-cchhHHHHHHh----------CCcEEE--eCCHHHHHHHH
Confidence 9999999996 4579999999999999999863 33 222 122 344544 45899999888
Q ss_pred HHHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHhhh
Q 008154 527 RFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWASI 570 (576)
Q Consensus 527 ~~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~~~~ 570 (576)
.+++. |++.+.+|++++ ..+.++++++++++.+.+..+.+
T Consensus 333 ~~ll~----~~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~ 374 (391)
T PRK13608 333 ASLTN----GNEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQ 374 (391)
T ss_pred HHHhc----CHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhh
Confidence 88875 788888998887 35679999999999998876543
No 95
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.76 E-value=6e-20 Score=179.72 Aligned_cols=459 Identities=15% Similarity=0.155 Sum_probs=243.8
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHh-CCCcEEEEEecCCCCCCcccchhccccCceeEE-EeecCCeeEEEEEE
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAA-RGHRVMVVSPRYFNGTAADENFTLAKDLGCCMK-ICCFGGEQEIAFFH 144 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~-~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 144 (576)
-+..+.+|..+ ++||+.+++..-|+.-.+ .|.+-..++|...+....+-..-+......... -....++..+..++
T Consensus 29 ~lFEvAwEVaN--kVGGIYtVl~sKA~vt~~e~gd~y~l~GP~~e~~~rteve~le~~~~~i~~al~sm~s~G~~~~~Gr 106 (692)
T KOG3742|consen 29 LLFEVAWEVAN--KVGGIYTVLRSKAKVTTEEWGDNYCLIGPYKEHTYRTEVEPLEPENRPIRRALDSMRSRGCKVHYGR 106 (692)
T ss_pred hhhhhHHHHhh--ccCcEEEEEeccCcccHHHhccceEEeccccccchhhcccccCCCchHHHHHHHHHHhCCcEEEecc
Confidence 35667788766 689999999999887666 799999999965443221100000000000000 00112456667788
Q ss_pred eeecC-eEEEEecCCC--CC--C-CCCCCCC--CCCCCCchHHHH-HHHHHHHHhhcccCCCCCCCCCC-ccEEEeCCCc
Q 008154 145 EYREG-VDWVFVDHPS--YH--R-PGNPYGD--INGAFGDNQFRY-TLLCYAACEAPLVLPLGGFTYGE-KCIFLVNDWH 214 (576)
Q Consensus 145 ~~~~g-v~v~~l~~~~--~~--~-~~~~y~~--~~~~~~~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~-pDVvH~~~~~ 214 (576)
|.++| +.|+++|... +. + +++++.. .-.++.|.+..- .+++..+...+..+.. +.... .-|.|.|||.
T Consensus 107 WLIeG~P~viLfdlgs~a~~l~~wK~elwe~c~IgiP~~D~EtNDaiilG~~vawFL~e~~~--~~~~~~~vVahFHEW~ 184 (692)
T KOG3742|consen 107 WLIEGAPKVILFDLGSSAWKLNEWKGELWELCGIGIPHHDIETNDAIILGFMVAWFLGEFRE--LASSYTAVVAHFHEWQ 184 (692)
T ss_pred EEecCCCeEEEEEcccchhhHhhHhHHHHHhcCCCCCcccccccchhhHHHHHHHHHHHHHh--hcccchHHHHHHHHHH
Confidence 88887 7788887322 11 0 1111100 001222333332 2222222222111100 00002 3577999999
Q ss_pred cchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhccccc-cc-ccccccccCCcCccchhHHH
Q 008154 215 AGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEW-VF-PTWARTHALDTGEAVNVLKG 292 (576)
Q Consensus 215 ~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~ 292 (576)
++....+.+++. ..+.+|||+|++-. +..++. ...+.+..+.. .+ ...|+ ..-..+.+|++.
T Consensus 185 AGVgL~l~R~rr------l~iaTifTTHATLL----GRyLCA---~~~DfYNnLd~f~vD~EAGk---r~IYHrYC~ERa 248 (692)
T KOG3742|consen 185 AGVGLILCRARR------LDIATIFTTHATLL----GRYLCA---GNVDFYNNLDSFDVDKEAGK---RQIYHRYCLERA 248 (692)
T ss_pred hccchheehhcc------cceEEEeehhHHHH----HHHHhc---ccchhhhchhhcccchhhcc---chhHHHHHHHHH
Confidence 998766666655 67899999998721 000100 00011111000 00 00000 000234689999
Q ss_pred HHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCC-ccccccCCcCCcccchHhHHHHH
Q 008154 293 AIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSD-EHIASHYSIDDLSGKVQCKIALQ 371 (576)
Q Consensus 293 a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~ 371 (576)
|.+.|+.+++||+.++-+.. .++.+.++ .+.|||.++..|...-. ++|.-. .+..-.+..|
T Consensus 249 a~h~AhVFTTVSeITa~EAe---------HlLkRKPD--~itPNGLNV~KFsA~HEFQNLHA~-------~KekIndFVR 310 (692)
T KOG3742|consen 249 AAHTAHVFTTVSEITALEAE---------HLLKRKPD--VITPNGLNVKKFSAVHEFQNLHAQ-------KKEKINDFVR 310 (692)
T ss_pred hhhhhhhhhhHHHHHHHHHH---------HHHhcCCC--eeCCCCcceeehhHHHHHHHHHHH-------HHHHHHHHhh
Confidence 99999999999999886642 24455555 78999999988764321 100000 0000011122
Q ss_pred HH-cCC-C-CCCCCCEEEEecccc-cccCHHHHHHHHHhhhc------CC---cEEEEE-eCCC----------h---hh
Q 008154 372 KE-LGL-P-IRPDCPLIGFIGRLD-YQKGIDLIRLAAPEILA------DD---IQFVML-GSGD----------P---QF 424 (576)
Q Consensus 372 ~~-~~i-~-~~~~~~~i~~~Gr~~-~~Kg~~~ll~a~~~L~~------~~---~~lii~-G~g~----------~---~~ 424 (576)
.- +|- . +-++.+++..+||++ .+||.|.+|+++++|.- .+ +.|+|. .+.+ . +.
T Consensus 311 GHF~GhlDFdLdkTlyfFiAGRYEf~NKGaDmFiEsLaRLN~~Lk~~~s~~TVVaFlImPaktN~FnVesLkgqAv~kqL 390 (692)
T KOG3742|consen 311 GHFHGHLDFDLDKTLYFFIAGRYEFSNKGADMFIESLARLNYLLKVSGSPKTVVAFLIMPAKTNSFNVESLKGQAVRKQL 390 (692)
T ss_pred hhccccccccccceEEEEEeeeeeeccCchHHHHHHHHHhHHHHeecCCCceEEEEEEeecCCCccchhhhccHHHHHHH
Confidence 11 121 0 013667888899999 79999999999999853 12 222222 2111 0 00
Q ss_pred ----HHHHHHHHHH-----h------------------------------------------------------------
Q 008154 425 ----ESWMRDTEAT-----Y------------------------------------------------------------ 435 (576)
Q Consensus 425 ----~~~~~~~~~~-----~------------------------------------------------------------ 435 (576)
.+..+.+.++ +
T Consensus 391 ~dtv~~Vk~~~Gkrifd~~l~g~lPd~~ell~~~d~v~lKr~i~a~~r~slPPv~THNm~dDa~DpiL~~iRr~~LFN~~ 470 (692)
T KOG3742|consen 391 WDTVNEVKEKVGKRIFDHCLRGELPDLDELLDKDDLVLLKRCIFALQRQSLPPVCTHNMIDDANDPILSSIRRIGLFNSP 470 (692)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCCChHHhhChhHHHHHHHHHHHhccCCCCCceeccccccccchHHHHhHhhhcccCc
Confidence 0000000000 0
Q ss_pred --cCceEEEccC---Chh----HHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCC
Q 008154 436 --KDKYRGWVGF---NVP----ISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGS 506 (576)
Q Consensus 436 --~~~~~~~~~~---~~~----~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~ 506 (576)
++++++...| ..+ .-.+++.+|.+.|+||+||+||+++.|.-.+|+|-|+|+.+|+.-.+++.- .+
T Consensus 471 ~DRVKvifHPEFLss~sPllglDYeeFVRGCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi-----~d 545 (692)
T KOG3742|consen 471 SDRVKVIFHPEFLSSTSPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHI-----ED 545 (692)
T ss_pred ccceEEEecHHHhccCCCCcCCCHHHHhccccccccccccCCCCCCchheEEeccccccccccchhhhHHHHh-----cC
Confidence 0111111110 000 001345999999999999999999999999999999999999886665511 11
Q ss_pred CCcceeEeCCC---CHHHHHHHHHHHHHHhhhCHHHHHHHHHHH----HhhhCCHHHHHHHHHHHHHHhh
Q 008154 507 GEGTGWSFLPL---SEESMLTALRFAIRTYREHKSSWEGLMRRG----MEKDYTWENAAIQYEQVFEWAS 569 (576)
Q Consensus 507 ~~~~G~~~~~~---d~~~la~~i~~~l~~~~~~~~~~~~~~~~a----~~~~fs~~~~~~~y~~~y~~~~ 569 (576)
...-|+.+-+. .+++-.+++.+.++.+ ....+++++.++. +..-.+|..+-..|.+.=+.++
T Consensus 546 ~~ayGIYIvDRRfks~deSv~qL~~~m~~F-~~qsRRQRIiqRNrtErLSdLLDWk~lG~~Y~~aR~laL 614 (692)
T KOG3742|consen 546 PQAYGIYIVDRRFKSPDESVQQLASFMYEF-CKQSRRQRIIQRNRTERLSDLLDWKYLGRYYRKARHLAL 614 (692)
T ss_pred chhceEEEEecccCChhhHHHHHHHHHHHH-HHHHHHHHHHHhcchhhHHHHHhHHHHhHHHHHHHHHHH
Confidence 23467766322 3344444444444433 2345555555544 4557899999999988765554
No 96
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.76 E-value=3e-16 Score=162.87 Aligned_cols=217 Identities=15% Similarity=0.054 Sum_probs=140.0
Q ss_pred HhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCC-CCCCCCCCCCccccccCCcCCcccchHhHHHHHHH
Q 008154 295 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGI-DITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 373 (576)
Q Consensus 295 ~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGv-d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 373 (576)
+.||.++++|+..++.+.+ .+.+++++.+++||+ |...+...... ...+++.
T Consensus 140 ~~ad~~~~~s~~~~~~l~~----------~G~~~~~I~vign~~~d~~~~~~~~~~-----------------~~~~~~~ 192 (365)
T TIGR00236 140 HIADLHFAPTEQAKDNLLR----------ENVKADSIFVTGNTVIDALLTNVEIAY-----------------SSPVLSE 192 (365)
T ss_pred HHHHhccCCCHHHHHHHHH----------cCCCcccEEEeCChHHHHHHHHHhhcc-----------------chhHHHh
Confidence 4689999999998887642 245677899999996 42211111000 1233444
Q ss_pred cCCCCCCCCCEEEEecccc-cccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHH
Q 008154 374 LGLPIRPDCPLIGFIGRLD-YQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPIS 450 (576)
Q Consensus 374 ~~i~~~~~~~~i~~~Gr~~-~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (576)
++. ++..++++.+|.+ ..|+++.+++|+.++.+ ++++++++|.+++.......... ....++.+.........
T Consensus 193 ~~~---~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~ 268 (365)
T TIGR00236 193 FGE---DKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNPVVREPLHKHL-GDSKRVHLIEPLEYLDF 268 (365)
T ss_pred cCC---CCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCChHHHHHHHHHh-CCCCCEEEECCCChHHH
Confidence 552 2334444454653 56999999999999864 47889988765432222111111 12234544443333344
Q ss_pred HHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEe-CccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHH
Q 008154 451 HRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH-ATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFA 529 (576)
Q Consensus 451 ~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat-~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~ 529 (576)
..+++.+|+++.+| |...+|||++|+|+|++ +.|+..|.+.. + +++++ +.|++++++++.++
T Consensus 269 ~~~l~~ad~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~----------g-~~~lv-~~d~~~i~~ai~~l 331 (365)
T TIGR00236 269 LNLAANSHLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEA----------G-TNKLV-GTDKENITKAAKRL 331 (365)
T ss_pred HHHHHhCCEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhc----------C-ceEEe-CCCHHHHHHHHHHH
Confidence 57899999999887 66789999999999996 67888888765 4 55565 46899999999888
Q ss_pred HHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHH
Q 008154 530 IRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQ 563 (576)
Q Consensus 530 l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~ 563 (576)
+. |++.+.+++++. .....+++++++...+
T Consensus 332 l~----~~~~~~~~~~~~~~~g~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 332 LT----DPDEYKKMSNASNPYGDGEASERIVEELLN 363 (365)
T ss_pred Hh----ChHHHHHhhhcCCCCcCchHHHHHHHHHHh
Confidence 75 777777776654 2233455666655544
No 97
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=99.71 E-value=5.5e-15 Score=151.08 Aligned_cols=184 Identities=11% Similarity=0.014 Sum_probs=124.9
Q ss_pred hhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhH
Q 008154 288 NVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCK 367 (576)
Q Consensus 288 ~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 367 (576)
.+++..++.||.++++|+.+++.+.+ .+....++.+++|..+.....+..
T Consensus 115 ~~~~~~~~~aD~iI~~S~~~~~~l~~----------~g~~~~~i~~~~~~~~~~~~~~~~-------------------- 164 (333)
T PRK09814 115 KEEIDMLNLADVLIVHSKKMKDRLVE----------EGLTTDKIIVQGIFDYLNDIELVK-------------------- 164 (333)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHHH----------cCCCcCceEecccccccccccccc--------------------
Confidence 46778889999999999999887642 122345666666554321111000
Q ss_pred HHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCCh
Q 008154 368 IALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNV 447 (576)
Q Consensus 368 ~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (576)
.+ .....|+|+|++.+.+. +.. ..++++|+|+|+|+... ....++.+....+.
T Consensus 165 --------~~--~~~~~i~yaG~l~k~~~----l~~----~~~~~~l~i~G~g~~~~---------~~~~~V~f~G~~~~ 217 (333)
T PRK09814 165 --------TP--SFQKKINFAGNLEKSPF----LKN----WSQGIKLTVFGPNPEDL---------ENSANISYKGWFDP 217 (333)
T ss_pred --------cc--cCCceEEEecChhhchH----HHh----cCCCCeEEEECCCcccc---------ccCCCeEEecCCCH
Confidence 01 24568999999995432 111 23578999999996321 12335554444466
Q ss_pred hHHHHHHhcCCEEEeCCCC-----------CCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCC
Q 008154 448 PISHRITAGCDILLMPSRF-----------EPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLP 516 (576)
Q Consensus 448 ~~~~~ll~~~Dv~v~ps~~-----------E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~ 516 (576)
+++..+|+. |+.+.+... -++|....|+||||+|||+++.+++.+++.+ +.+|++++
T Consensus 218 eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~----------~~~G~~v~- 285 (333)
T PRK09814 218 EELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVE----------NGLGFVVD- 285 (333)
T ss_pred HHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHh----------CCceEEeC-
Confidence 677778887 665543311 2678889999999999999999999999998 89999997
Q ss_pred CCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH
Q 008154 517 LSEESMLTALRFAIRTYREHKSSWEGLMRRG 547 (576)
Q Consensus 517 ~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a 547 (576)
+.+++++++..+ +++.+.+|++++
T Consensus 286 -~~~el~~~l~~~------~~~~~~~m~~n~ 309 (333)
T PRK09814 286 -SLEELPEIIDNI------TEEEYQEMVENV 309 (333)
T ss_pred -CHHHHHHHHHhc------CHHHHHHHHHHH
Confidence 677777777764 346677777776
No 98
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.71 E-value=9.4e-16 Score=170.43 Aligned_cols=300 Identities=14% Similarity=0.137 Sum_probs=191.3
Q ss_pred ccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChh-hhhhcCCChhhhc-ccccccccccccccCC
Q 008154 205 KCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAA-TYKNLGLPSEWYG-ALEWVFPTWARTHALD 282 (576)
Q Consensus 205 pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 282 (576)
-|+|-+||.|..++|.+++++. +.+++-|..|.| ||.. .++.+......+. .+...+-.|.+
T Consensus 232 gD~VWVHDYHL~LlP~~LR~~~------p~~~IGfFlHiP-----FPs~Eifr~LP~r~elL~glL~aDlIGFqT----- 295 (934)
T PLN03064 232 GDVVWCHDYHLMFLPKCLKEYN------SNMKVGWFLHTP-----FPSSEIHRTLPSRSELLRSVLAADLVGFHT----- 295 (934)
T ss_pred CCEEEEecchhhHHHHHHHHhC------CCCcEEEEecCC-----CCChHHHhhCCcHHHHHHHHhcCCeEEeCC-----
Confidence 3899999999999999999876 789999999998 4433 3354443332222 12222222211
Q ss_pred cCccchhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCccc
Q 008154 283 TGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSG 362 (576)
Q Consensus 283 ~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~ 362 (576)
+...+..+..|..+.+..... ..+. +.....++.+.|-|||...|...... .+
T Consensus 296 ----~~y~rhFl~~c~rlLg~~~~~-~~v~-----------~~Gr~v~V~~~PiGID~~~f~~~~~~-----------~~ 348 (934)
T PLN03064 296 ----YDYARHFVSACTRILGLEGTP-EGVE-----------DQGRLTRVAAFPIGIDSDRFIRALET-----------PQ 348 (934)
T ss_pred ----HHHHHHHHHHHHHHhCccccC-CeEE-----------ECCEEEEEEEEeCEEcHHHHHHHhcC-----------hh
Confidence 122223333333333332110 0110 01112347788999998877543211 01
Q ss_pred chHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CC----cEEEEEe-----CCChhhHHHHHHH
Q 008154 363 KVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DD----IQFVMLG-----SGDPQFESWMRDT 431 (576)
Q Consensus 363 ~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~----~~lii~G-----~g~~~~~~~~~~~ 431 (576)
-....+.+++.++ +..+|+.++|++..||+...++|++++.+ ++ +.|+-+. ++ +.++++.+++
T Consensus 349 v~~~~~~lr~~~~-----g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v-~eY~~l~~~V 422 (934)
T PLN03064 349 VQQHIKELKERFA-----GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDV-PEYQKLTSQV 422 (934)
T ss_pred HHHHHHHHHHHhC-----CceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCc-HHHHHHHHHH
Confidence 1112345555554 56799999999999999999999998654 32 4444333 33 3444444444
Q ss_pred HH---HhcCce--------EE-EccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHc-----CCceEEeCccccccc
Q 008154 432 EA---TYKDKY--------RG-WVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRY-----GTIPVVHATGGLRDT 494 (576)
Q Consensus 432 ~~---~~~~~~--------~~-~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~-----G~pvIat~~gg~~e~ 494 (576)
.+ ..+.++ .. ....+.+....+|+.||++|+||..|+++++.+|+|+| |.+|+ |..+|..+.
T Consensus 423 ~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLIL-SEfaGaa~~ 501 (934)
T PLN03064 423 HEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDSKKGVLIL-SEFAGAAQS 501 (934)
T ss_pred HHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhhcCCCCCeEE-eCCCchHHH
Confidence 33 222221 11 22245666778999999999999999999999999999 55555 777777776
Q ss_pred cccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHhh
Q 008154 495 VENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWAS 569 (576)
Q Consensus 495 i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~~~ 569 (576)
+. ..+++++|.|.+++|++|.+++.. +++++.++.++. ....+++...++.+++....+.
T Consensus 502 L~------------~~AllVNP~D~~~vA~AI~~AL~M---~~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L~~~~ 563 (934)
T PLN03064 502 LG------------AGAILVNPWNITEVAASIAQALNM---PEEEREKRHRHNFMHVTTHTAQEWAETFVSELNDTV 563 (934)
T ss_pred hC------------CceEEECCCCHHHHHHHHHHHHhC---CHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHH
Confidence 63 468999999999999999999873 455555555554 3467999999999887776654
No 99
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.71 E-value=3e-15 Score=156.27 Aligned_cols=199 Identities=15% Similarity=0.037 Sum_probs=128.0
Q ss_pred HHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHH
Q 008154 293 AIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQK 372 (576)
Q Consensus 293 a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 372 (576)
..+.+|.++++|+...+.+. ....++.++.|.+... ..+.. . +..+++
T Consensus 131 ~~~~~d~i~~~~~~~~~~~~-------------~~g~~~~~~G~p~~~~-~~~~~-~-----------------~~~~~~ 178 (380)
T PRK00025 131 IAKATDHVLALFPFEAAFYD-------------KLGVPVTFVGHPLADA-IPLLP-D-----------------RAAARA 178 (380)
T ss_pred HHHHHhhheeCCccCHHHHH-------------hcCCCeEEECcCHHHh-ccccc-C-----------------hHHHHH
Confidence 35788999999987665432 1112355666555422 11111 1 345677
Q ss_pred HcCCCCCCCCCEE-EEec-ccccc-cCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHh-cCceEEEccCC
Q 008154 373 ELGLPIRPDCPLI-GFIG-RLDYQ-KGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATY-KDKYRGWVGFN 446 (576)
Q Consensus 373 ~~~i~~~~~~~~i-~~~G-r~~~~-Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~-~~~~~~~~~~~ 446 (576)
.++++ ++.+++ ++.| |.... +.++.++++++.+.+ ++++++++|...+..++..+.+. .. ..++..+ +
T Consensus 179 ~l~~~--~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~~~~~~~~~~~-~~~~~~v~~~---~ 252 (380)
T PRK00025 179 RLGLD--PDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPKRREQIEEALA-EYAGLEVTLL---D 252 (380)
T ss_pred HcCCC--CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCChhhHHHHHHHHh-hcCCCCeEEE---c
Confidence 78886 445554 4555 45443 457899999998865 47899999863232333333333 22 2233322 2
Q ss_pred hhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEe-----------------CccccccccccccccccCCCCCc
Q 008154 447 VPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH-----------------ATGGLRDTVENFNPFAREGSGEG 509 (576)
Q Consensus 447 ~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat-----------------~~gg~~e~i~~~~~~~~~~~~~~ 509 (576)
. ....+|+.||++|.+| |.+.+|||++|+|+|++ +.+++++.+.+ ....
T Consensus 253 ~-~~~~~~~~aDl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--------~~~~ 318 (380)
T PRK00025 253 G-QKREAMAAADAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAG--------RELV 318 (380)
T ss_pred c-cHHHHHHhCCEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcC--------CCcc
Confidence 2 3457999999999987 89999999999999987 34455555544 0123
Q ss_pred ceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH
Q 008154 510 TGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG 547 (576)
Q Consensus 510 ~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a 547 (576)
.++..+..|++++++.+.+++. |++.+++|++++
T Consensus 319 ~~~~~~~~~~~~l~~~i~~ll~----~~~~~~~~~~~~ 352 (380)
T PRK00025 319 PELLQEEATPEKLARALLPLLA----DGARRQALLEGF 352 (380)
T ss_pred hhhcCCCCCHHHHHHHHHHHhc----CHHHHHHHHHHH
Confidence 5566677789999999998875 888888888875
No 100
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.68 E-value=9.2e-15 Score=148.79 Aligned_cols=223 Identities=27% Similarity=0.382 Sum_probs=159.3
Q ss_pred hccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcC
Q 008154 296 TADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELG 375 (576)
Q Consensus 296 ~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 375 (576)
.++.++..|......+. . .....++.+++|+++...+.+.. .+
T Consensus 150 ~~~~~~~~~~~~~~~~~----------~-~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~ 192 (381)
T COG0438 150 LADRVIAVSPALKELLE----------A-LGVPNKIVVIPNGIDTEKFAPAR--------------------------IG 192 (381)
T ss_pred cccEEEECCHHHHHHHH----------H-hCCCCCceEecCCcCHHHcCccc--------------------------cC
Confidence 35667777765433221 1 11122688999999987665420 11
Q ss_pred CCCCCCCCEEEEecccccccCHHHHHHHHHhhhcC--CcEEEEEeCCChhhHHHHHHHHHHh-cCceEEEccC-ChhHHH
Q 008154 376 LPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILAD--DIQFVMLGSGDPQFESWMRDTEATY-KDKYRGWVGF-NVPISH 451 (576)
Q Consensus 376 i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~--~~~lii~G~g~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~ 451 (576)
+..+.....++++||+.+.||++.+++++..+... ++.+.++|.++.........+.... ..++.+ .++ +.+...
T Consensus 193 ~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~-~g~~~~~~~~ 271 (381)
T COG0438 193 LLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPERREELEKLAKKLGLEDNVKF-LGYVPDEELA 271 (381)
T ss_pred CCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCccHHHHHHHHHHhCCCCcEEE-ecccCHHHHH
Confidence 11111137899999999999999999999999773 3899999999642122222222222 234443 444 324555
Q ss_pred HHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHH
Q 008154 452 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 452 ~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
.+++.+|++++||.+|++|++++|||++|+|+|+++.++..|.+.+ +.+|+.+.+.|.+++++++..++.
T Consensus 272 ~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~----------~~~g~~~~~~~~~~~~~~i~~~~~ 341 (381)
T COG0438 272 ELLASADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVED----------GETGLLVPPGDVEELADALEQLLE 341 (381)
T ss_pred HHHHhCCEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcC----------CCceEecCCCCHHHHHHHHHHHhc
Confidence 6889999999999999999999999999999999999999999987 557887666679999999999876
Q ss_pred HhhhCHHHHHHHHHHH---HhhhCCHHHHHHHHHHHHHHhhh
Q 008154 532 TYREHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFEWASI 570 (576)
Q Consensus 532 ~~~~~~~~~~~~~~~a---~~~~fs~~~~~~~y~~~y~~~~~ 570 (576)
+++.+..+++.+ +.+.|+|+++.+++.+++.....
T Consensus 342 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (381)
T COG0438 342 ----DPELREELGEAARERVEEEFSWERIAEQLLELYEELLA 379 (381)
T ss_pred ----CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 445555555422 34789999999999999987664
No 101
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.67 E-value=2.4e-14 Score=148.47 Aligned_cols=199 Identities=15% Similarity=0.062 Sum_probs=126.9
Q ss_pred HHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCC-CCCCCCCCCCccccccCCcCCcccchHhHHHHH
Q 008154 293 AIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGI-DITEWNPSSDEHIASHYSIDDLSGKVQCKIALQ 371 (576)
Q Consensus 293 a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGv-d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 371 (576)
..+.+|.++++|+..++.+.+ .+.+..++.+++|++ |...+.+.... ....+
T Consensus 138 ~~~~ad~~~~~s~~~~~~l~~----------~G~~~~kI~vign~v~d~~~~~~~~~~-----------------~~~~~ 190 (363)
T cd03786 138 IDKLSDLHFAPTEEARRNLLQ----------EGEPPERIFVVGNTMIDALLRLLELAK-----------------KELIL 190 (363)
T ss_pred HHHHhhhccCCCHHHHHHHHH----------cCCCcccEEEECchHHHHHHHHHHhhc-----------------cchhh
Confidence 346789999999988876532 245677899999996 43221111100 11223
Q ss_pred HHcCCCCCCCCCEEEEeccccc---ccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHh--cCceEEEccCC
Q 008154 372 KELGLPIRPDCPLIGFIGRLDY---QKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATY--KDKYRGWVGFN 446 (576)
Q Consensus 372 ~~~~i~~~~~~~~i~~~Gr~~~---~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~--~~~~~~~~~~~ 446 (576)
+.++++ ++..++++.||... .|+++.+++|++.+.++++.+++.|.+. ......+.+.+.. ..++.+.....
T Consensus 191 ~~~~~~--~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~-~~~~l~~~~~~~~~~~~~v~~~~~~~ 267 (363)
T cd03786 191 ELLGLL--PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPR-TRPRIREAGLEFLGHHPNVLLISPLG 267 (363)
T ss_pred hhcccC--CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCC-hHHHHHHHHHhhccCCCCEEEECCcC
Confidence 456665 45567888999874 7999999999999865456666666553 2233333333221 23444332223
Q ss_pred hhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCc-cccccccccccccccCCCCCcceeEeCCC-CHHHHHH
Q 008154 447 VPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT-GGLRDTVENFNPFAREGSGEGTGWSFLPL-SEESMLT 524 (576)
Q Consensus 447 ~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~-gg~~e~i~~~~~~~~~~~~~~~G~~~~~~-d~~~la~ 524 (576)
.+....+++.||++|.+|- | ...|||++|+|+|+++. +...+.+. +|+.+..+ |++++++
T Consensus 268 ~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~-------------~g~~~~~~~~~~~i~~ 329 (363)
T cd03786 268 YLYFLLLLKNADLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVE-------------SGTNVLVGTDPEAILA 329 (363)
T ss_pred HHHHHHHHHcCcEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhh-------------eeeEEecCCCHHHHHH
Confidence 3456678999999999983 4 47899999999999875 33445543 34443333 6899999
Q ss_pred HHHHHHHHhhhCHHHHHHH
Q 008154 525 ALRFAIRTYREHKSSWEGL 543 (576)
Q Consensus 525 ~i~~~l~~~~~~~~~~~~~ 543 (576)
+|.+++. ++....+|
T Consensus 330 ~i~~ll~----~~~~~~~~ 344 (363)
T cd03786 330 AIEKLLS----DEFAYSLM 344 (363)
T ss_pred HHHHHhc----CchhhhcC
Confidence 8988875 55555444
No 102
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.58 E-value=1.6e-12 Score=124.77 Aligned_cols=379 Identities=13% Similarity=0.092 Sum_probs=225.7
Q ss_pred HHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEeeecCeEEEEecCCCCCCC
Q 008154 84 LGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRP 163 (576)
Q Consensus 84 ~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~~~~~~~ 163 (576)
-+-.+..+|..|++.|.+|.+++ |.+....... .+.++++++-+.++++...
T Consensus 25 RSPRMqYHA~Sla~~gf~VdliG--y~~s~p~e~l--------------------------~~hprI~ih~m~~l~~~~~ 76 (444)
T KOG2941|consen 25 RSPRMQYHALSLAKLGFQVDLIG--YVESIPLEEL--------------------------LNHPRIRIHGMPNLPFLQG 76 (444)
T ss_pred CChHHHHHHHHHHHcCCeEEEEE--ecCCCChHHH--------------------------hcCCceEEEeCCCCcccCC
Confidence 44567899999999999999998 4332111111 1236788888887775441
Q ss_pred --CCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCcc--chHHHHHHhhccCCCCCCCCcEEE
Q 008154 164 --GNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHA--GLVPVLLASKYRPHGVYKDARSIL 239 (576)
Q Consensus 164 --~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~--~~~~~~l~~~~~~~~~~~~~~~v~ 239 (576)
.-+|.. ..-...+..+..+... ...||++.+.+..+ .++...+.... .+++.+.
T Consensus 77 ~p~~~~l~-----lKvf~Qfl~Ll~aL~~-----------~~~~~~ilvQNPP~iPtliv~~~~~~l------~~~KfiI 134 (444)
T KOG2941|consen 77 GPRVLFLP-----LKVFWQFLSLLWALFV-----------LRPPDIILVQNPPSIPTLIVCVLYSIL------TGAKFII 134 (444)
T ss_pred CchhhhhH-----HHHHHHHHHHHHHHHh-----------ccCCcEEEEeCCCCCchHHHHHHHHHH------hcceEEE
Confidence 111211 0111222222222211 12689999987544 33333333323 5789999
Q ss_pred EeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCccchhhhccccCCcc
Q 008154 240 VIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYG 319 (576)
Q Consensus 240 t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~ 319 (576)
.-|+..+. ..+.-.+|..... -.... -.|+..-+.||.-.+|++.+++++.+
T Consensus 135 DWHNy~Ys----l~l~~~~g~~h~l-V~l~~-----------------~~E~~fgk~a~~nLcVT~AMr~dL~q------ 186 (444)
T KOG2941|consen 135 DWHNYGYS----LQLKLKLGFQHPL-VRLVR-----------------WLEKYFGKLADYNLCVTKAMREDLIQ------ 186 (444)
T ss_pred EehhhHHH----HHHHhhcCCCCch-HHHHH-----------------HHHHHhhcccccchhhHHHHHHHHHH------
Confidence 99987432 1111122211111 11110 14555567899999999999877643
Q ss_pred hhhhhhccCCceeEecCCCCCCCCCCCCC---ccccccCCcC-------CcccchHhHHHHHHHcC---CCCC-CCCCEE
Q 008154 320 LHEILSSRKSVLNGITNGIDITEWNPSSD---EHIASHYSID-------DLSGKVQCKIALQKELG---LPIR-PDCPLI 385 (576)
Q Consensus 320 l~~~~~~~~~~i~vi~nGvd~~~~~~~~~---~~l~~~~~~~-------~~~~~~~~~~~~~~~~~---i~~~-~~~~~i 385 (576)
.++. .+..+++.--. -.+..- -+++.+..+. .-.++......+-++.. .... ....++
T Consensus 187 ---nWgi--~ra~v~YDrPp---s~~~~l~~~H~lf~~l~~d~~~f~ar~~q~~~~~~taf~~k~~s~~v~~~~~~pall 258 (444)
T KOG2941|consen 187 ---NWGI--NRAKVLYDRPP---SKPTPLDEQHELFMKLAGDHSPFRAREPQDKALERTAFTKKDASGDVQLLPERPALL 258 (444)
T ss_pred ---hcCC--ceeEEEecCCC---CCCCchhHHHHHHhhhccccchhhhcccccchhhhhhHhhhcccchhhhccCCCeEE
Confidence 2221 12334332111 011111 1122222221 11122222233333332 1111 233566
Q ss_pred EEecccccccCHHHHHHHHHhhh-----c----CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccC-ChhHHHHHHh
Q 008154 386 GFIGRLDYQKGIDLIRLAAPEIL-----A----DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRITA 455 (576)
Q Consensus 386 ~~~Gr~~~~Kg~~~ll~a~~~L~-----~----~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~ 455 (576)
+++-...+..++..|++|+.... + +.+-.+|-|+|+ ..+...+.+.+..-.++-+...+ ..+....+++
T Consensus 259 vsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGP-lkE~Y~~~I~~~~~~~v~~~tpWL~aEDYP~ll~ 337 (444)
T KOG2941|consen 259 VSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGP-LKEKYSQEIHEKNLQHVQVCTPWLEAEDYPKLLA 337 (444)
T ss_pred EecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCc-hhHHHHHHHHHhcccceeeeecccccccchhHhh
Confidence 77778889999999999998432 1 467888899995 45777777776544444433333 3444557899
Q ss_pred cCCEEE--eCCCCC-CCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHH
Q 008154 456 GCDILL--MPSRFE-PCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRT 532 (576)
Q Consensus 456 ~~Dv~v--~ps~~E-~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~ 532 (576)
.||+.| ++|..- ..++.++.-.-||+||+|.+...+.|.+++ ++||++|+ |.+++++.+..+...
T Consensus 338 saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~ELVkh----------~eNGlvF~--Ds~eLa~ql~~lf~~ 405 (444)
T KOG2941|consen 338 SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLDELVKH----------GENGLVFE--DSEELAEQLQMLFKN 405 (444)
T ss_pred ccccceEeeecCcccCcchhHHHhhcCCCceeeecchhHHHHHhc----------CCCceEec--cHHHHHHHHHHHHhc
Confidence 999765 566543 678999999999999999999999999999 99999996 799999999999988
Q ss_pred hhhCHHHHHHHHHHHHh-hhCCHHHHHHHH
Q 008154 533 YREHKSSWEGLMRRGME-KDYTWENAAIQY 561 (576)
Q Consensus 533 ~~~~~~~~~~~~~~a~~-~~fs~~~~~~~y 561 (576)
+.++.....++.++... +...|+..-++.
T Consensus 406 fp~~a~~l~~lkkn~~e~~e~RW~~~W~~~ 435 (444)
T KOG2941|consen 406 FPDNADELNQLKKNLREEQELRWDESWERT 435 (444)
T ss_pred CCCCHHHHHHHHHhhHHHHhhhHHHHHHHh
Confidence 87788888888777753 456666554443
No 103
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=99.51 E-value=9.9e-14 Score=122.25 Aligned_cols=129 Identities=26% Similarity=0.367 Sum_probs=90.2
Q ss_pred CCEEEEecccccccCHHHHHH-HHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCC
Q 008154 382 CPLIGFIGRLDYQKGIDLIRL-AAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCD 458 (576)
Q Consensus 382 ~~~i~~~Gr~~~~Kg~~~ll~-a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~D 458 (576)
.++++++|++.+.|+++.+++ +++++.+ ++++|.|+|.+++ + .+.. ...++.. .++.+ ....++++||
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~---~-l~~~---~~~~v~~-~g~~~-e~~~~l~~~d 72 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD---E-LKRL---RRPNVRF-HGFVE-ELPEILAAAD 72 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS----H-HCCH---HHCTEEE-E-S-H-HHHHHHHC-S
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH---H-HHHh---cCCCEEE-cCCHH-HHHHHHHhCC
Confidence 468999999999999999999 9999975 6899999999864 1 2222 1224443 33333 4668999999
Q ss_pred EEEeCCC-CCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHH
Q 008154 459 ILLMPSR-FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 459 v~v~ps~-~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
+.+.|+. .|+++++++|||++|+|+|+++. +..++... ...|+.+ .+|+++++++|.+++.
T Consensus 73 v~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~----------~~~~~~~-~~~~~~l~~~i~~l~~ 134 (135)
T PF13692_consen 73 VGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEE----------DGCGVLV-ANDPEELAEAIERLLN 134 (135)
T ss_dssp EEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS-------------SEEEE--TT-HHHHHHHHHHHHH
T ss_pred EEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheee----------cCCeEEE-CCCHHHHHHHHHHHhc
Confidence 9999996 67899999999999999999999 56666654 4677777 7799999999999875
No 104
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.44 E-value=4e-11 Score=124.78 Aligned_cols=163 Identities=17% Similarity=0.065 Sum_probs=102.7
Q ss_pred HHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHH
Q 008154 290 LKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIA 369 (576)
Q Consensus 290 ~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 369 (576)
.+...+.+|.+++.++...+.+ .....+..++.|++-.. +...... +..
T Consensus 132 ~r~l~~~~d~v~~~~~~e~~~~-------------~~~g~~~~~vGnPv~~~-~~~~~~~-----------------~~~ 180 (385)
T TIGR00215 132 AKKIEKATDFLLAILPFEKAFY-------------QKKNVPCRFVGHPLLDA-IPLYKPD-----------------RKS 180 (385)
T ss_pred HHHHHHHHhHhhccCCCcHHHH-------------HhcCCCEEEECCchhhh-ccccCCC-----------------HHH
Confidence 3455679999999998765443 21224566788877422 1111001 345
Q ss_pred HHHHcCCCCCCCCCEEEEe-c-cccc-ccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHh--cCceEEE
Q 008154 370 LQKELGLPIRPDCPLIGFI-G-RLDY-QKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATY--KDKYRGW 442 (576)
Q Consensus 370 ~~~~~~i~~~~~~~~i~~~-G-r~~~-~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~--~~~~~~~ 442 (576)
.++.++++ ++.++|++. | |..+ .|++..+++|++.+.+ +++++++++.... ..+..+.+.+.. ..++..+
T Consensus 181 ~r~~lgl~--~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~-~~~~~~~~~~~~~~~~~v~~~ 257 (385)
T TIGR00215 181 AREKLGID--HNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK-RRLQFEQIKAEYGPDLQLHLI 257 (385)
T ss_pred HHHHcCCC--CCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch-hHHHHHHHHHHhCCCCcEEEE
Confidence 67778886 456666554 3 7776 7999999999999865 4778877554322 222333333332 2344333
Q ss_pred ccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEe-Ccccccccc
Q 008154 443 VGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH-ATGGLRDTV 495 (576)
Q Consensus 443 ~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat-~~gg~~e~i 495 (576)
.+ + ...+|+.||++|.+| |++.+|||++|+|+|.+ ..++++-++
T Consensus 258 ~~-~---~~~~l~aADl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~ 302 (385)
T TIGR00215 258 DG-D---ARKAMFAADAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLI 302 (385)
T ss_pred Cc-h---HHHHHHhCCEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHH
Confidence 22 2 336899999999998 88889999999999887 344444433
No 105
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=99.40 E-value=4.3e-11 Score=124.39 Aligned_cols=296 Identities=14% Similarity=0.070 Sum_probs=185.3
Q ss_pred ccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcC
Q 008154 205 KCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTG 284 (576)
Q Consensus 205 pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (576)
-|+|-+||.|..++|.+++++. +..++-|..|.|. .+.+.++.+......+.
T Consensus 124 ~D~VWVHDYhL~llp~~LR~~~------~~~~IgFFlHiPF----Ps~eifr~LP~r~eil~------------------ 175 (474)
T PRK10117 124 DDIIWIHDYHLLPFASELRKRG------VNNRIGFFLHIPF----PTPEIFNALPPHDELLE------------------ 175 (474)
T ss_pred CCEEEEeccHhhHHHHHHHHhC------CCCcEEEEEeCCC----CChHHHhhCCChHHHHH------------------
Confidence 4899999999999999999876 7789999999983 22333354443322221
Q ss_pred ccchhHHHHHHhccceeccCccchhhhccc---cCC----cchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCc
Q 008154 285 EAVNVLKGAIVTADRLLTVSKGYSWEITTV---EGG----YGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSI 357 (576)
Q Consensus 285 ~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~---~~~----~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~ 357 (576)
++-.||.|-+-+..+.+.+.+. ..+ .+..-.......++.+.|-|||.+.|......
T Consensus 176 --------glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~~~~~~~a~~-------- 239 (474)
T PRK10117 176 --------QLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEPDEIAKQAAG-------- 239 (474)
T ss_pred --------HHHhCccceeCCHHHHHHHHHHHHHHcCCcccCCCeEEECCeEEEEEEEECeEcHHHHHHHhhc--------
Confidence 2223333333333322221110 000 00000001123358889999998776432211
Q ss_pred CCcccchHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc------CCcEEEEEeCCC----hhhHHH
Q 008154 358 DDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA------DDIQFVMLGSGD----PQFESW 427 (576)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~------~~~~lii~G~g~----~~~~~~ 427 (576)
........+++.++ +..+|+.+.|++.-||+..=++|++++.+ .++.|+-++... +.+.+.
T Consensus 240 ----~~~~~~~~lr~~~~-----~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~l 310 (474)
T PRK10117 240 ----PLPPKLAQLKAELK-----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDI 310 (474)
T ss_pred ----hHHHHHHHHHHHcC-----CCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCCCccHHHHHH
Confidence 01111334555543 46788899999999999999999999875 267787776432 334444
Q ss_pred HHHHHH---HhcCc--------eE-EEccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCC-----ceEEeCccc
Q 008154 428 MRDTEA---TYKDK--------YR-GWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGT-----IPVVHATGG 490 (576)
Q Consensus 428 ~~~~~~---~~~~~--------~~-~~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~-----pvIat~~gg 490 (576)
.+++.+ ..+++ +. ...+++.+....+|+.|||++.+|..+++.++..|+.||-. +.|.|...|
T Consensus 311 ~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAG 390 (474)
T PRK10117 311 RHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG 390 (474)
T ss_pred HHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecCCCCccEEEecccc
Confidence 444433 22211 11 12234566666899999999999999999999999999954 255566666
Q ss_pred cccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHh
Q 008154 491 LRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWA 568 (576)
Q Consensus 491 ~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~~ 568 (576)
..+.+. ..++++|.|.+++|++|.+++... ++++.+..+.. ....++...-++.+++.+..+
T Consensus 391 aA~~L~-------------~AllVNP~d~~~~A~Ai~~AL~Mp---~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~ 454 (474)
T PRK10117 391 AANELT-------------SALIVNPYDRDEVAAALDRALTMP---LAERISRHAEMLDVIVKNDINHWQECFISDLKQI 454 (474)
T ss_pred hHHHhC-------------CCeEECCCCHHHHHHHHHHHHcCC---HHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHh
Confidence 666553 377889999999999999999853 33333333322 235678888888888877765
Q ss_pred h
Q 008154 569 S 569 (576)
Q Consensus 569 ~ 569 (576)
.
T Consensus 455 ~ 455 (474)
T PRK10117 455 V 455 (474)
T ss_pred h
Confidence 3
No 106
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=99.39 E-value=1.4e-11 Score=131.65 Aligned_cols=162 Identities=13% Similarity=0.129 Sum_probs=130.0
Q ss_pred CCEEEEec--ccccccCHHHHHHHHHhhhc--CCcEEEEEeCCCh-hhHHHHHHH-HHHhcC------------------
Q 008154 382 CPLIGFIG--RLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDP-QFESWMRDT-EATYKD------------------ 437 (576)
Q Consensus 382 ~~~i~~~G--r~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~-~~~~~~~~~-~~~~~~------------------ 437 (576)
...+++++ |+ +.|.++.+|+|+.++.. ++++|.+.|.+.+ .....++.+ .+....
T Consensus 319 ~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~~~gy~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 397 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELKILTYNNDNDITQLLEDILEQINEEYNQDKNFFSLSEQDENQP 397 (519)
T ss_pred cceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEEEEEecCchhHHHHHHHHHHHHHhhhchhhhccccchhhhhhh
Confidence 34677777 99 99999999999999854 7999999998853 233333322 211001
Q ss_pred -----------ceEEEccCCh-hHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCC
Q 008154 438 -----------KYRGWVGFNV-PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREG 505 (576)
Q Consensus 438 -----------~~~~~~~~~~-~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~ 505 (576)
..+.+.++.. ..+...+..+.++|.+|..|+++ +.+||++.|+|+| .-|..+.|.+
T Consensus 398 ~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~~~V~d-------- 465 (519)
T TIGR03713 398 ILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGIPQI---NKVETDYVEH-------- 465 (519)
T ss_pred cccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCCCee---ecCCceeeEc--------
Confidence 3566777755 24458999999999999999999 9999999999999 4456899998
Q ss_pred CCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHH--hhhCCHHHHHHHHHHH
Q 008154 506 SGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGM--EKDYTWENAAIQYEQV 564 (576)
Q Consensus 506 ~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a~--~~~fs~~~~~~~y~~~ 564 (576)
++||+++ +|..++++++...+. +++.|.++...+. +++||-+++++++.++
T Consensus 466 --~~NG~li--~d~~~l~~al~~~L~----~~~~wn~~~~~sy~~~~~yS~~~i~~kW~~~ 518 (519)
T TIGR03713 466 --NKNGYII--DDISELLKALDYYLD----NLKNWNYSLAYSIKLIDDYSSENIIERLNEL 518 (519)
T ss_pred --CCCcEEe--CCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHhhHHHHHHHHHhh
Confidence 9999999 689999999988876 8899999999884 5799999999998775
No 107
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=99.37 E-value=3.9e-11 Score=126.36 Aligned_cols=290 Identities=16% Similarity=0.170 Sum_probs=155.3
Q ss_pred CccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChh-hhhhcCCChhhhcccccccccccccccCC
Q 008154 204 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAA-TYKNLGLPSEWYGALEWVFPTWARTHALD 282 (576)
Q Consensus 204 ~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (576)
.-|+|-+||.|..++|.+++++. +++++.|..|+| ||.. .++.+......+
T Consensus 141 ~~D~VWVhDYhL~llP~~LR~~~------~~~~IgfFlHiP-----FPs~e~fr~lP~r~eiL----------------- 192 (474)
T PF00982_consen 141 PGDLVWVHDYHLMLLPQMLRERG------PDARIGFFLHIP-----FPSSEIFRCLPWREEIL----------------- 192 (474)
T ss_dssp TT-EEEEESGGGTTHHHHHHHTT--------SEEEEEE-S---------HHHHTTSTTHHHHH-----------------
T ss_pred CCCEEEEeCCcHHHHHHHHHhhc------CCceEeeEEecC-----CCCHHHHhhCCcHHHHH-----------------
Confidence 45899999999999999999876 789999999998 4433 335444322222
Q ss_pred cCccchhHHHHHHhccceeccCccchhhhccccCCcchhhh-------------hhccCCceeEecCCCCCCCCCCCCCc
Q 008154 283 TGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEI-------------LSSRKSVLNGITNGIDITEWNPSSDE 349 (576)
Q Consensus 283 ~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~-------------~~~~~~~i~vi~nGvd~~~~~~~~~~ 349 (576)
.++-.||.|-+-+..+.+...+. .... +.....++.+.|-|||.+.+......
T Consensus 193 ---------~glL~aDlIgFqt~~~~~nFl~~-----~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~ 258 (474)
T PF00982_consen 193 ---------RGLLGADLIGFQTFEYARNFLSC-----CKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARS 258 (474)
T ss_dssp ---------HHHTTSSEEEESSHHHHHHHHHH-----HHHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-
T ss_pred ---------HHhhcCCEEEEecHHHHHHHHHH-----HHHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccC
Confidence 22334454444444433322110 0011 11123457888889987665321100
Q ss_pred cccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc------CCcEEEEEeCCC--
Q 008154 350 HIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA------DDIQFVMLGSGD-- 421 (576)
Q Consensus 350 ~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~------~~~~lii~G~g~-- 421 (576)
.+-......+++.++ .+..+|+.+.|++..||+..=++|++++.+ .++.|+-++...
T Consensus 259 -----------~~v~~~~~~l~~~~~----~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~ 323 (474)
T PF00982_consen 259 -----------PEVQERAEELREKFK----GKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSRE 323 (474)
T ss_dssp -----------S---HHHHHHHHHTT----T-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-ST
T ss_pred -----------hHHHHHHHHHHHhcC----CCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccCc
Confidence 000111344555553 234789999999999999999999999865 368888777531
Q ss_pred --hhhHHHHHHHHH-------Hhc-Cc---eEEE-ccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCc----e
Q 008154 422 --PQFESWMRDTEA-------TYK-DK---YRGW-VGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTI----P 483 (576)
Q Consensus 422 --~~~~~~~~~~~~-------~~~-~~---~~~~-~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~p----v 483 (576)
+.+.+..+++.+ .+. .. +..+ .+.+.+....+|+.||+++.+|..++..++..|+.+|... +
T Consensus 324 ~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q~~~~GvL 403 (474)
T PF00982_consen 324 DVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQDDNPGVL 403 (474)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS-TS--EE
T ss_pred cchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEecCCCCce
Confidence 223344444433 221 11 2222 2356677778999999999999999999999999998544 5
Q ss_pred EEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHH
Q 008154 484 VVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQY 561 (576)
Q Consensus 484 Iat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y 561 (576)
|.|...|..+.+.+ ..++++|-|.+++|++|.+++... ++++....++. ....++...-++.+
T Consensus 404 iLSefaGaa~~L~~------------~al~VNP~d~~~~A~ai~~AL~M~---~~Er~~r~~~~~~~v~~~~~~~W~~~~ 468 (474)
T PF00982_consen 404 ILSEFAGAAEQLSE------------AALLVNPWDIEEVADAIHEALTMP---PEERKERHARLREYVREHDVQWWAESF 468 (474)
T ss_dssp EEETTBGGGGT-TT------------S-EEE-TT-HHHHHHHHHHHHT-----HHHHHHHHHHHHHHHHHT-HHHHHHHH
T ss_pred EeeccCCHHHHcCC------------ccEEECCCChHHHHHHHHHHHcCC---HHHHHHHHHHHHHHhHhCCHHHHHHHH
Confidence 55666666666643 348899999999999999999854 33333332222 23467777777777
Q ss_pred HHHH
Q 008154 562 EQVF 565 (576)
Q Consensus 562 ~~~y 565 (576)
++-.
T Consensus 469 l~~L 472 (474)
T PF00982_consen 469 LRDL 472 (474)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6654
No 108
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=99.32 E-value=1.3e-11 Score=113.54 Aligned_cols=171 Identities=23% Similarity=0.227 Sum_probs=87.0
Q ss_pred ccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEeeecCeEEE
Q 008154 74 EAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWV 153 (576)
Q Consensus 74 e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 153 (576)
.+++ ..||+++++.+++++|+++||+|+++++........ .....
T Consensus 6 ~~~~--~~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~---------------------------------~~~~~ 50 (177)
T PF13439_consen 6 IFLP--NIGGAERVVLNLARALAKRGHEVTVVSPGVKDPIEE---------------------------------ELVKI 50 (177)
T ss_dssp C-TT--SSSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SS---------------------------------TEEEE
T ss_pred ecCC--CCChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchh---------------------------------hccce
Confidence 3445 379999999999999999999999998765432110 00000
Q ss_pred EecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhccCCCCCC
Q 008154 154 FVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYK 233 (576)
Q Consensus 154 ~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~ 233 (576)
....+.... ....+.........+.++.. +|||||+|.............
T Consensus 51 ~~~~~~~~~-------------~~~~~~~~~~~~~~~~i~~~--------~~DiVh~~~~~~~~~~~~~~~--------- 100 (177)
T PF13439_consen 51 FVKIPYPIR-------------KRFLRSFFFMRRLRRLIKKE--------KPDIVHIHGPPAFWIALLACR--------- 100 (177)
T ss_dssp ---TT-SST-------------SS--HHHHHHHHHHHHHHHH--------T-SEEECCTTHCCCHHHHHHH---------
T ss_pred eeeeecccc-------------cccchhHHHHHHHHHHHHHc--------CCCeEEecccchhHHHHHhcc---------
Confidence 000000000 00111111222333333323 799999998766554433332
Q ss_pred CCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCccchhhhcc
Q 008154 234 DARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITT 313 (576)
Q Consensus 234 ~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~ 313 (576)
++|+|+|.|+.... .............+. ....+...+.+|.++++|+.+++++.
T Consensus 101 ~~~~v~~~H~~~~~----~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~ii~vS~~~~~~l~- 155 (177)
T PF13439_consen 101 KVPIVYTIHGPYFE----RRFLKSKLSPYSYLN--------------------FRIERKLYKKADRIIAVSESTKDELI- 155 (177)
T ss_dssp CSCEEEEE-HHH------HHTTTTSCCCHHHHH--------------------HCTTHHHHCCSSEEEESSHHHHHHHH-
T ss_pred CCCEEEEeCCCccc----ccccccccchhhhhh--------------------hhhhhhHHhcCCEEEEECHHHHHHHH-
Confidence 48999999986321 000000000000000 11233446789999999999998864
Q ss_pred ccCCcchhhhhhccCCceeEecCCCCCCCC
Q 008154 314 VEGGYGLHEILSSRKSVLNGITNGIDITEW 343 (576)
Q Consensus 314 ~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~ 343 (576)
+ ++.++.++.+||||||++.|
T Consensus 156 --------~-~~~~~~ki~vI~ngid~~~F 176 (177)
T PF13439_consen 156 --------K-FGIPPEKIHVIYNGIDTDRF 176 (177)
T ss_dssp --------H-HT--SS-EEE----B-CCCH
T ss_pred --------H-hCCcccCCEEEECCccHHHc
Confidence 3 56677899999999998876
No 109
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=99.32 E-value=4.7e-12 Score=114.34 Aligned_cols=160 Identities=21% Similarity=0.206 Sum_probs=85.5
Q ss_pred CcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEeeecCeEEEEecCCCCC
Q 008154 82 GGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYH 161 (576)
Q Consensus 82 GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~~~~~ 161 (576)
||+++++.+++++|+++||+|+++++....... +....+++++.++.+...
T Consensus 1 GG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~ 51 (160)
T PF13579_consen 1 GGIERYVRELARALAARGHEVTVVTPQPDPEDD-----------------------------EEEEDGVRVHRLPLPRRP 51 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT-EEEEEEE---GGG------------------------------SEEETTEEEEEE--S-SS
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEEecCCCCccc-----------------------------ccccCCceEEeccCCccc
Confidence 899999999999999999999999976543210 112367888888643321
Q ss_pred CCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEe
Q 008154 162 RPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVI 241 (576)
Q Consensus 162 ~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~ 241 (576)
. ... ....+ ....+.+... ..+|||||+|.+.+.++..+++.. .++|+|+|+
T Consensus 52 ~---~~~--------~~~~~----~~~~~~l~~~------~~~~Dvv~~~~~~~~~~~~~~~~~-------~~~p~v~~~ 103 (160)
T PF13579_consen 52 W---PLR--------LLRFL----RRLRRLLAAR------RERPDVVHAHSPTAGLVAALARRR-------RGIPLVVTV 103 (160)
T ss_dssp S---GGG--------HCCHH----HHHHHHCHHC------T---SEEEEEHHHHHHHHHHHHHH-------HT--EEEE-
T ss_pred h---hhh--------hHHHH----HHHHHHHhhh------ccCCeEEEecccchhHHHHHHHHc-------cCCcEEEEE
Confidence 1 110 00011 1222222001 127999999997766666555522 469999999
Q ss_pred ecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCccchhhhccccCCcchh
Q 008154 242 HNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLH 321 (576)
Q Consensus 242 H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~ 321 (576)
|+...... .+.....+ ..+++..++.||.++++|+..++.+.
T Consensus 104 h~~~~~~~--------~~~~~~~~---------------------~~~~~~~~~~ad~vi~~S~~~~~~l~--------- 145 (160)
T PF13579_consen 104 HGTLFRRG--------SRWKRRLY---------------------RWLERRLLRRADRVIVVSEAMRRYLR--------- 145 (160)
T ss_dssp SS-T--------------HHHHHH---------------------HHHHHHHHHH-SEEEESSHHHHHHHH---------
T ss_pred CCCchhhc--------cchhhHHH---------------------HHHHHHHHhcCCEEEECCHHHHHHHH---------
Confidence 97531110 00000111 13677889999999999999998864
Q ss_pred hhhhccCCceeEecCC
Q 008154 322 EILSSRKSVLNGITNG 337 (576)
Q Consensus 322 ~~~~~~~~~i~vi~nG 337 (576)
+ ++.+.+++.+||||
T Consensus 146 ~-~g~~~~ri~vipnG 160 (160)
T PF13579_consen 146 R-YGVPPDRIHVIPNG 160 (160)
T ss_dssp H-H---GGGEEE----
T ss_pred H-hCCCCCcEEEeCcC
Confidence 3 46678899999998
No 110
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=99.29 E-value=1.1e-09 Score=113.49 Aligned_cols=296 Identities=16% Similarity=0.170 Sum_probs=182.3
Q ss_pred ccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcC
Q 008154 205 KCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTG 284 (576)
Q Consensus 205 pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (576)
=|+|-+||.|..++|..++.+. +..++.|..|.|. .+.++++.+......+.
T Consensus 148 gDiIWVhDYhL~L~P~mlR~~~------~~~~IgfFlHiPf----PssEvfr~lP~r~eIl~------------------ 199 (486)
T COG0380 148 GDIIWVHDYHLLLVPQMLRERI------PDAKIGFFLHIPF----PSSEVFRCLPWREEILE------------------ 199 (486)
T ss_pred CCEEEEEechhhhhHHHHHHhC------CCceEEEEEeCCC----CCHHHHhhCchHHHHHH------------------
Confidence 3999999999999999999887 6789999999983 23334454443222221
Q ss_pred ccchhHHHHHHhccceeccCccchhhhccc---cCC----cch-hhhhhccCCceeEecCCCCCCCCCCCCCccccccCC
Q 008154 285 EAVNVLKGAIVTADRLLTVSKGYSWEITTV---EGG----YGL-HEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYS 356 (576)
Q Consensus 285 ~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~---~~~----~~l-~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~ 356 (576)
++-.||.|-+-++.+++..... ..+ .+. ++.......++...|-|||+..|.......
T Consensus 200 --------gll~~dligFqt~~y~~nF~~~~~r~~~~~~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~------ 265 (486)
T COG0380 200 --------GLLGADLIGFQTESYARNFLDLCSRLLGVTGDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSP------ 265 (486)
T ss_pred --------HhhcCCeeEecCHHHHHHHHHHHHHhccccccccccccccCCceEEEEEEeeecCHHHHHHhhcCC------
Confidence 2233444444433333221100 000 000 000112345688999999988775433210
Q ss_pred cCCcccchHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc------CCcEEEEEeCCC----hhhHH
Q 008154 357 IDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA------DDIQFVMLGSGD----PQFES 426 (576)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~------~~~~lii~G~g~----~~~~~ 426 (576)
.-+.....+++.++ .+..+|+.+-|++.-||+..=+.|+++|.. .++.++-++... +.+..
T Consensus 266 -----~v~~~~~el~~~~~----~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr~~v~~y~~ 336 (486)
T COG0380 266 -----SVQEKVLELKAELG----RNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQA 336 (486)
T ss_pred -----chhhHHHHHHHHhc----CCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCccccHHHHH
Confidence 00011233344433 236788889999999999999999999975 267788777653 22223
Q ss_pred HHHHHHH---HhcC--------ceE-EEccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHc----CCceEEeCccc
Q 008154 427 WMRDTEA---TYKD--------KYR-GWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRY----GTIPVVHATGG 490 (576)
Q Consensus 427 ~~~~~~~---~~~~--------~~~-~~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~----G~pvIat~~gg 490 (576)
....+.+ +.++ -+. +....+.++...++..+|+++.+|..|++.++..|+.|| +.+.|-|...|
T Consensus 337 ~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaG 416 (486)
T COG0380 337 LRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAG 416 (486)
T ss_pred HHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHHHHhhcCCCCcEEEecccc
Confidence 3333332 1111 111 223345666778999999999999999999999999887 23455555555
Q ss_pred cccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHH--hhhCCHHHHHHHHHHHHHH
Q 008154 491 LRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGM--EKDYTWENAAIQYEQVFEW 567 (576)
Q Consensus 491 ~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a~--~~~fs~~~~~~~y~~~y~~ 567 (576)
....+. ..++++|.|.+++|++|.++|... ++++++..+..+ ...++..+.++.+++....
T Consensus 417 aa~~L~-------------~AliVNP~d~~~va~ai~~AL~m~---~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la~ 479 (486)
T COG0380 417 AASELR-------------DALIVNPWDTKEVADAIKRALTMS---LEERKERHEKLLKQVLTHDVARWANSFLDDLAQ 479 (486)
T ss_pred chhhhc-------------cCEeECCCChHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 555443 278899999999999999999843 333333333221 3467888888887766554
No 111
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=99.25 E-value=8.8e-10 Score=123.87 Aligned_cols=307 Identities=15% Similarity=0.127 Sum_probs=180.2
Q ss_pred cEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChh-hhhhcCCChhhhcc-cccccccccccccCCc
Q 008154 206 CIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAA-TYKNLGLPSEWYGA-LEWVFPTWARTHALDT 283 (576)
Q Consensus 206 DVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 283 (576)
|+|-+||.|..++|.+++++. +.+++-|..|.| ||.. .++.+......+.. +...+-.|.+
T Consensus 203 d~VWVhDYhL~llP~~LR~~~------~~~~IgfFlHiP-----FPs~eifr~LP~r~eiL~glL~aDlIGFht------ 265 (854)
T PLN02205 203 DFVWIHDYHLMVLPTFLRKRF------NRVKLGFFLHSP-----FPSSEIYKTLPIREELLRALLNSDLIGFHT------ 265 (854)
T ss_pred CEEEEeCchhhHHHHHHHhhC------CCCcEEEEecCC-----CCChHHHhhCCcHHHHHHHHhcCCeEEecC------
Confidence 899999999999999998876 789999999998 4433 33555433332221 1112211111
Q ss_pred CccchhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccc
Q 008154 284 GEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGK 363 (576)
Q Consensus 284 ~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~ 363 (576)
+...+..+..|..+.+.......-. .++ .+.....++.+.|-|||...|...... .+.
T Consensus 266 ---~~yar~Fl~~~~r~lgl~~~~~~g~------~~~--~~~Gr~v~v~~~PigId~~~~~~~~~~-----------~~~ 323 (854)
T PLN02205 266 ---FDYARHFLSCCSRMLGLSYESKRGY------IGL--EYYGRTVSIKILPVGIHMGQLQSVLSL-----------PET 323 (854)
T ss_pred ---HHHHHHHHHHHHHHhCCcccCCCcc------eeE--EECCcEEEEEEEeCeEcHHHHHHHhcC-----------hhH
Confidence 1122222223333222211100000 000 011134457889999998766432211 011
Q ss_pred hHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--C----CcEEEEEeCCC----hhhHHHHHHHHH
Q 008154 364 VQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D----DIQFVMLGSGD----PQFESWMRDTEA 433 (576)
Q Consensus 364 ~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~----~~~lii~G~g~----~~~~~~~~~~~~ 433 (576)
....+.+++.++- ++..+|+.+.|++.-||+..=++|++++.+ + ++.|+-+.... +.+.+...++.+
T Consensus 324 ~~~~~~l~~~~~~---~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~ 400 (854)
T PLN02205 324 EAKVKELIKQFCD---QDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHS 400 (854)
T ss_pred HHHHHHHHHHhcc---CCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHH
Confidence 1112344554431 256789999999999999999999999865 2 56777766432 234444444432
Q ss_pred ---HhcC--------ceEEE-ccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCC-------------------c
Q 008154 434 ---TYKD--------KYRGW-VGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGT-------------------I 482 (576)
Q Consensus 434 ---~~~~--------~~~~~-~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~-------------------p 482 (576)
+.+. -+..+ .+++.++..++|+.||+++.+|..+++.++..|+.+|.. .
T Consensus 401 ~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gv 480 (854)
T PLN02205 401 TVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSM 480 (854)
T ss_pred HHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccccCCCCc
Confidence 2111 12222 334666667899999999999999999999999998743 2
Q ss_pred eEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHHhhhCCHHHHHHHHH
Q 008154 483 PVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYE 562 (576)
Q Consensus 483 vIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~ 562 (576)
.|.|...|....+. ..+.++|.|.+++|++|.+++....+++..+.+...+ ....++....++.++
T Consensus 481 LiLSEfaGaa~~L~-------------~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~-~v~~~d~~~W~~~fl 546 (854)
T PLN02205 481 LVVSEFIGCSPSLS-------------GAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYR-YVSTHDVGYWARSFL 546 (854)
T ss_pred eEeeeccchhHHhC-------------cCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHH-HHhhCCHHHHHHHHH
Confidence 33344444443332 3678899999999999999998532222222222222 234567777777777
Q ss_pred HHHHHh
Q 008154 563 QVFEWA 568 (576)
Q Consensus 563 ~~y~~~ 568 (576)
+-.+.+
T Consensus 547 ~~l~~~ 552 (854)
T PLN02205 547 QDLERT 552 (854)
T ss_pred HHHHHH
Confidence 666554
No 112
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=99.14 E-value=2.2e-10 Score=93.62 Aligned_cols=89 Identities=22% Similarity=0.320 Sum_probs=79.8
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHH
Q 008154 459 ILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKS 538 (576)
Q Consensus 459 v~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~ 538 (576)
++++|+..++++...+|+||||+|+|+.+.++..+.+.+ +.+++.++ |++++.+.+..++. ||+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~----------~~~~~~~~--~~~el~~~i~~ll~----~~~ 64 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFED----------GEHIITYN--DPEELAEKIEYLLE----NPE 64 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCC----------CCeEEEEC--CHHHHHHHHHHHHC----CHH
Confidence 468899999999999999999999999999999999988 77888886 89999999998875 899
Q ss_pred HHHHHHHHH---HhhhCCHHHHHHHHHH
Q 008154 539 SWEGLMRRG---MEKDYTWENAAIQYEQ 563 (576)
Q Consensus 539 ~~~~~~~~a---~~~~fs~~~~~~~y~~ 563 (576)
.++++++++ +.++|+|++.++++++
T Consensus 65 ~~~~ia~~a~~~v~~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 65 ERRRIAKNARERVLKRHTWEHRAEQILE 92 (92)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHC
Confidence 999999988 5679999999998863
No 113
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.07 E-value=2.1e-07 Score=95.70 Aligned_cols=307 Identities=14% Similarity=0.121 Sum_probs=161.4
Q ss_pred ccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEeeecCeEEEEecCCC
Q 008154 80 KTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPS 159 (576)
Q Consensus 80 ~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~~~ 159 (576)
.+||--.=+..++++|.+.||+|.+++..+.-... ..+ -.|++++.++...
T Consensus 10 GTGGHi~Pala~a~~l~~~g~~v~~vg~~~~~e~~---l~~--------------------------~~g~~~~~~~~~~ 60 (352)
T PRK12446 10 GSAGHVTPNLAIIPYLKEDNWDISYIGSHQGIEKT---IIE--------------------------KENIPYYSISSGK 60 (352)
T ss_pred CcHHHHHHHHHHHHHHHhCCCEEEEEECCCccccc---cCc--------------------------ccCCcEEEEeccC
Confidence 36888788889999999999999999865432110 000 0245555554222
Q ss_pred CCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEE
Q 008154 160 YHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSIL 239 (576)
Q Consensus 160 ~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~ 239 (576)
+.+... ..+......+..+..++++.+ ++.+|||||.+.+..++ |..+..+. .++|+++
T Consensus 61 l~~~~~---------~~~~~~~~~~~~~~~~~~~i~-----~~~kPdvvi~~Ggy~s~-p~~~aa~~------~~~p~~i 119 (352)
T PRK12446 61 LRRYFD---------LKNIKDPFLVMKGVMDAYVRI-----RKLKPDVIFSKGGFVSV-PVVIGGWL------NRVPVLL 119 (352)
T ss_pred cCCCch---------HHHHHHHHHHHHHHHHHHHHH-----HhcCCCEEEecCchhhH-HHHHHHHH------cCCCEEE
Confidence 222100 011111122223333332221 12289999998766554 34444444 5788876
Q ss_pred EeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCccchhhhccccCCcc
Q 008154 240 VIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYG 319 (576)
Q Consensus 240 t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~ 319 (576)
...+... |+ ..+...+.++.+.+-=+...
T Consensus 120 ~e~n~~~------------g~----------------------------~nr~~~~~a~~v~~~f~~~~----------- 148 (352)
T PRK12446 120 HESDMTP------------GL----------------------------ANKIALRFASKIFVTFEEAA----------- 148 (352)
T ss_pred ECCCCCc------------cH----------------------------HHHHHHHhhCEEEEEccchh-----------
Confidence 5443210 11 12344567787765322111
Q ss_pred hhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEEEe-cccccccCHH
Q 008154 320 LHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFI-GRLDYQKGID 398 (576)
Q Consensus 320 l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~-Gr~~~~Kg~~ 398 (576)
+.+ +..++.++-|.|...... .. +...++.++++ ++.++|+.. |... .+.+.
T Consensus 149 --~~~--~~~k~~~tG~Pvr~~~~~-~~-------------------~~~~~~~~~l~--~~~~~iLv~GGS~G-a~~in 201 (352)
T PRK12446 149 --KHL--PKEKVIYTGSPVREEVLK-GN-------------------REKGLAFLGFS--RKKPVITIMGGSLG-AKKIN 201 (352)
T ss_pred --hhC--CCCCeEEECCcCCccccc-cc-------------------chHHHHhcCCC--CCCcEEEEECCccc-hHHHH
Confidence 111 235677777777643321 11 23344566765 455555555 4444 44453
Q ss_pred H-HHHHHHhhhcCCcEEEE-EeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHH
Q 008154 399 L-IRLAAPEILADDIQFVM-LGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYA 476 (576)
Q Consensus 399 ~-ll~a~~~L~~~~~~lii-~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEA 476 (576)
. +.+++..+.. ++++++ .|..+ .++.... .. ++. ..+|..+.+..+|+.||++|.- +-++|+.|+
T Consensus 202 ~~~~~~l~~l~~-~~~vv~~~G~~~--~~~~~~~----~~-~~~-~~~f~~~~m~~~~~~adlvIsr----~G~~t~~E~ 268 (352)
T PRK12446 202 ETVREALPELLL-KYQIVHLCGKGN--LDDSLQN----KE-GYR-QFEYVHGELPDILAITDFVISR----AGSNAIFEF 268 (352)
T ss_pred HHHHHHHHhhcc-CcEEEEEeCCch--HHHHHhh----cC-CcE-EecchhhhHHHHHHhCCEEEEC----CChhHHHHH
Confidence 3 4444555533 476665 45432 3332221 11 222 2355433455799999999854 578899999
Q ss_pred HHcCCceEEeCccc----ccc-----ccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHHHHHhhhCHHHHH
Q 008154 477 MRYGTIPVVHATGG----LRD-----TVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAIRTYREHKSSWE 541 (576)
Q Consensus 477 ma~G~pvIat~~gg----~~e-----~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~l~~~~~~~~~~~ 541 (576)
+++|+|.|...... ..+ .+.+ .+.+..+... +++.+++.+.+++. |++.+.
T Consensus 269 ~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~----------~g~~~~l~~~~~~~~~l~~~l~~ll~----~~~~~~ 330 (352)
T PRK12446 269 LTLQKPMLLIPLSKFASRGDQILNAESFER----------QGYASVLYEEDVTVNSLIKHVEELSH----NNEKYK 330 (352)
T ss_pred HHcCCCEEEEcCCCCCCCchHHHHHHHHHH----------CCCEEEcchhcCCHHHHHHHHHHHHc----CHHHHH
Confidence 99999999984321 112 2222 3445555432 46777777777653 665544
No 114
>KOG2099 consensus Glycogen phosphorylase [Carbohydrate transport and metabolism]
Probab=98.99 E-value=1.2e-09 Score=110.91 Aligned_cols=347 Identities=15% Similarity=0.172 Sum_probs=208.3
Q ss_pred EEEeCCCccchH-HHHHHhhccCCCC----CCCC---cEEEEeecCCCCC--CCChhhhhhcC---------CChhhhcc
Q 008154 207 IFLVNDWHAGLV-PVLLASKYRPHGV----YKDA---RSILVIHNLSHQG--VEPAATYKNLG---------LPSEWYGA 267 (576)
Q Consensus 207 VvH~~~~~~~~~-~~~l~~~~~~~~~----~~~~---~~v~t~H~~~~~~--~~~~~~~~~~~---------~~~~~~~~ 267 (576)
.|.+|+-|+.+. |-+++...-..++ +..+ .+-+|-||.-+.. .+|.+++..+- +...++..
T Consensus 335 AiQlNDTHPtLaIpELmRiLvD~e~l~W~~AWdit~kT~AYTNHTVlpEALErWp~~L~e~LLPRHleIIy~In~~~l~~ 414 (843)
T KOG2099|consen 335 AIQLNDTHPTLAIPELMRILVDLEGLDWDKAWDITQKTCAYTNHTVLPEALERWPVSLMEKLLPRHLEIIYEINQRFLQT 414 (843)
T ss_pred eeeccCCCccccHHHHHHHHHhcccCCHHHHHHHhhhheeeccccccHHHHHHhhHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 788999888765 4444322111111 1122 4568888874433 56666553221 11111111
Q ss_pred ccc----ccccccccc---cCCcCccchhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCC
Q 008154 268 LEW----VFPTWARTH---ALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDI 340 (576)
Q Consensus 268 ~~~----~~~~~~~~~---~~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~ 340 (576)
... ....+.|+. .......++|..+++-.+..|++|.+.+.+.+.+.- +++.+...+.|..--+|||-+
T Consensus 415 i~~~fp~D~drlrrmsiiee~~~~k~i~MA~L~ivgsHaVNGVa~iHSeilK~~~----F~Df~e~~P~KFqNkTNGITP 490 (843)
T KOG2099|consen 415 VAAKFPGDVDRLRRMSIIEENSPEKRINMAHLCIVGSHAVNGVAEIHSEILKQSV----FKDFYELEPEKFQNKTNGITP 490 (843)
T ss_pred HHHHCCCcHHHHhhhhhhhcCCccceeeeeeeeeecccccccHHHHHHHHHHHHH----HHHHHHhChHHhccccCCcCH
Confidence 111 111222221 111344688888888899999999888777665432 355666778888899999988
Q ss_pred CCC---CCCCCccccccCCcCCcc----------------------------cchHhHHHHHHHcCCCCCCCCCEEEEec
Q 008154 341 TEW---NPSSDEHIASHYSIDDLS----------------------------GKVQCKIALQKELGLPIRPDCPLIGFIG 389 (576)
Q Consensus 341 ~~~---~~~~~~~l~~~~~~~~~~----------------------------~~~~~~~~~~~~~~i~~~~~~~~i~~~G 389 (576)
..| ..+.-+++.....+.+|. .+......+.+.++...+++.+.=+-+-
T Consensus 491 RRWL~~cnP~LadlI~e~ige~~i~dl~~l~~L~~~a~d~~f~~~~a~vK~~NKlk~a~~le~e~~v~inp~smFDiqVK 570 (843)
T KOG2099|consen 491 RRWLLLCNPGLADLITEKIGEEWITDLDQLTKLRKFADDEEFQREWAKVKQENKLKLAAYLEKEYGVKINPSSMFDIQVK 570 (843)
T ss_pred HHHHHhcCchHHHHHHHHhhhHhhhhHHHHHHHHHhcccHHHHHHHHHHHHhhHHHHHHHHHHHhCcccCcchhhhhhHH
Confidence 765 344555666666666662 1222223455566766666666556678
Q ss_pred ccccccCHHH----HHHHHHhhhcC-----CcEEEEEe-CCChhhHHHHHHH------HH--------HhcCceEEEccC
Q 008154 390 RLDYQKGIDL----IRLAAPEILAD-----DIQFVMLG-SGDPQFESWMRDT------EA--------TYKDKYRGWVGF 445 (576)
Q Consensus 390 r~~~~Kg~~~----ll~a~~~L~~~-----~~~lii~G-~g~~~~~~~~~~~------~~--------~~~~~~~~~~~~ 445 (576)
|+..+|+.-+ ++--..++++. .-+.+++| ++-|.+-..+..+ +. ....+++++..|
T Consensus 571 RIHEYKRQllN~l~vi~~y~riK~e~~k~fvprtvm~GGKaapgY~mAK~Iiklit~V~dvVN~Dp~vgd~LKViFl~nY 650 (843)
T KOG2099|consen 571 RIHEYKRQLLNCLHVIYLYNRIKEEPAKAFVPRTVMIGGKAAPGYHMAKLIIKLITAVADVVNNDPEVGDRLKVIFLENY 650 (843)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhccCceEEEEcCccCchhHHHHHHHHHHHHHHHHhcCChhhhheeEEEEecCc
Confidence 8888888543 33344555542 22445555 4444333222222 11 122468889999
Q ss_pred ChhHHHHHHhcCCEEEeCCC--CCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEe---------
Q 008154 446 NVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSF--------- 514 (576)
Q Consensus 446 ~~~~~~~ll~~~Dv~v~ps~--~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~--------- 514 (576)
.-.++..++-++|+-=.-|. .|++|++-|+-|.+|+.+|.|.+|..-|+-.+.+ .+|-|+|
T Consensus 651 ~Vs~AE~iIPasdLSe~ISTAGtEASGT~NMKF~lNG~l~IGTlDGANVEm~eE~G--------eeN~FiFG~~~e~V~~ 722 (843)
T KOG2099|consen 651 RVSLAEKIIPASDLSEQISTAGTEASGTGNMKFMLNGALTIGTLDGANVEMAEEAG--------EENFFIFGMRVEDVEA 722 (843)
T ss_pred ccchhhhccchHHHHHHhhhccccccCCCcceEEecCeEEEecccccchHHHHHcC--------cccEEEecccHHHHHH
Confidence 88888788899998765555 7999999999999999999999999888776521 2344443
Q ss_pred ------------------------------CCCCHHHHHHHHHHH---------------------HHHhhhCHHHHHHH
Q 008154 515 ------------------------------LPLSEESMLTALRFA---------------------IRTYREHKSSWEGL 543 (576)
Q Consensus 515 ------------------------------~~~d~~~la~~i~~~---------------------l~~~~~~~~~~~~~ 543 (576)
.|.+++++...+..+ +...+.|++.|.+|
T Consensus 723 L~k~gy~a~~~~~~~P~l~~v~~~i~sG~Fsp~~pd~fkd~~~~l~~hD~f~V~~Df~sYi~~q~kVd~~y~nqk~W~~m 802 (843)
T KOG2099|consen 723 LRKKGYNAQEYYDPLPELKQVIDQIESGFFSPKNPDEFKDIVNMLMYHDYFLVFADFEAYIKCQEKVDQLYRNQKEWLKM 802 (843)
T ss_pred HHhhcccccccCCCCchHHHHHHHHhcCccCCCCchHHHHHHHhhhccceEEeeCcHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 234444433322221 22223468889988
Q ss_pred HHHHHh--hhCCHHHHHHHHHHHH
Q 008154 544 MRRGME--KDYTWENAAIQYEQVF 565 (576)
Q Consensus 544 ~~~a~~--~~fs~~~~~~~y~~~y 565 (576)
+-..++ -+||.++.+.+|.+-.
T Consensus 803 si~niA~sgkFSSDRtI~eYa~eI 826 (843)
T KOG2099|consen 803 SILNIAGSGKFSSDRTIAEYAREI 826 (843)
T ss_pred HHHhhhcccccCccchHHHHHHHh
Confidence 887754 4899999999997643
No 115
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=98.92 E-value=2.9e-06 Score=86.49 Aligned_cols=312 Identities=14% Similarity=0.051 Sum_probs=171.4
Q ss_pred ccCcHHHHHhhHHHHHHhCCCc-EEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEeeecCeEEEEecCC
Q 008154 80 KTGGLGDVCGSLPVALAARGHR-VMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHP 158 (576)
Q Consensus 80 ~~GG~~~~~~~la~~l~~~G~~-V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~~ 158 (576)
.+||--.-+..++++|.++|++ |.+++........ .....++.++.++..
T Consensus 9 GTGGHv~pAlAl~~~l~~~g~~~v~~~~~~~~~e~~-----------------------------l~~~~~~~~~~I~~~ 59 (357)
T COG0707 9 GTGGHVFPALALAEELAKRGWEQVIVLGTGDGLEAF-----------------------------LVKQYGIEFELIPSG 59 (357)
T ss_pred CCccchhHHHHHHHHHHhhCccEEEEecccccceee-----------------------------eccccCceEEEEecc
Confidence 3788888999999999999995 5555433211100 011135777777654
Q ss_pred CCCCCCCCCCCCCCCCCchHHHHHHHHHH---HHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhccCCCCCCCC
Q 008154 159 SYHRPGNPYGDINGAFGDNQFRYTLLCYA---ACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDA 235 (576)
Q Consensus 159 ~~~~~~~~y~~~~~~~~~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~ 235 (576)
.+.+.. .+ .+......+..+ ..+.++.+ +||+|..-.+..+. |..++.+. .++
T Consensus 60 ~~~~~~-~~--------~~~~~~~~~~~~~~~a~~il~~~--------kPd~vig~Ggyvs~-P~~~Aa~~------~~i 115 (357)
T COG0707 60 GLRRKG-SL--------KLLKAPFKLLKGVLQARKILKKL--------KPDVVIGTGGYVSG-PVGIAAKL------LGI 115 (357)
T ss_pred cccccC-cH--------HHHHHHHHHHHHHHHHHHHHHHc--------CCCEEEecCCcccc-HHHHHHHh------CCC
Confidence 433311 11 112222222233 33333333 89999987766665 44444444 579
Q ss_pred cEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCccchhhhcccc
Q 008154 236 RSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVE 315 (576)
Q Consensus 236 ~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~ 315 (576)
|++....+.. .|+.. +...+.|+.|.+.-+...
T Consensus 116 Pv~ihEqn~~------------~G~an----------------------------k~~~~~a~~V~~~f~~~~------- 148 (357)
T COG0707 116 PVIIHEQNAV------------PGLAN----------------------------KILSKFAKKVASAFPKLE------- 148 (357)
T ss_pred CEEEEecCCC------------cchhH----------------------------HHhHHhhceeeecccccc-------
Confidence 9888766542 12211 222345666555322101
Q ss_pred CCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEEEec-ccccc
Q 008154 316 GGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIG-RLDYQ 394 (576)
Q Consensus 316 ~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~G-r~~~~ 394 (576)
-.....++.+.-|.|..+... .. ...++.... .+.++|+..| ...-.
T Consensus 149 --------~~~~~~~~~~tG~Pvr~~~~~-~~-------------------~~~~~~~~~----~~~~~ilV~GGS~Ga~ 196 (357)
T COG0707 149 --------AGVKPENVVVTGIPVRPEFEE-LP-------------------AAEVRKDGR----LDKKTILVTGGSQGAK 196 (357)
T ss_pred --------ccCCCCceEEecCcccHHhhc-cc-------------------hhhhhhhcc----CCCcEEEEECCcchhH
Confidence 012344677888888754433 11 111222211 1455655554 55544
Q ss_pred cCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEeCCCCCCCcHHHH
Q 008154 395 KGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQL 474 (576)
Q Consensus 395 Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~l 474 (576)
+=-+.+.++...+.+ +++++....... .++..+...+ ... ....+|.++ +..+|+.+|++|.= +=++|+-
T Consensus 197 ~ln~~v~~~~~~l~~-~~~v~~~~G~~~-~~~~~~~~~~-~~~--~~v~~f~~d-m~~~~~~ADLvIsR----aGa~Ti~ 266 (357)
T COG0707 197 ALNDLVPEALAKLAN-RIQVIHQTGKND-LEELKSAYNE-LGV--VRVLPFIDD-MAALLAAADLVISR----AGALTIA 266 (357)
T ss_pred HHHHHHHHHHHHhhh-CeEEEEEcCcch-HHHHHHHHhh-cCc--EEEeeHHhh-HHHHHHhccEEEeC----CcccHHH
Confidence 422333444445533 566666544322 3444443332 222 345566555 45799999999943 4679999
Q ss_pred HHHHcCCceEEeCcccc---c-----cccccccccccCCCCCcceeEeCCCC--HHHHHHHHHHHHHHhhhCHHHHHHHH
Q 008154 475 YAMRYGTIPVVHATGGL---R-----DTVENFNPFAREGSGEGTGWSFLPLS--EESMLTALRFAIRTYREHKSSWEGLM 544 (576)
Q Consensus 475 EAma~G~pvIat~~gg~---~-----e~i~~~~~~~~~~~~~~~G~~~~~~d--~~~la~~i~~~l~~~~~~~~~~~~~~ 544 (576)
|..++|+|.|-...+.. . ..+.+ ...|..+...+ ++.+.+.|.+++. +++...+|+
T Consensus 267 E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~----------~gaa~~i~~~~lt~~~l~~~i~~l~~----~~~~l~~m~ 332 (357)
T COG0707 267 ELLALGVPAILVPYPPGADGHQEYNAKFLEK----------AGAALVIRQSELTPEKLAELILRLLS----NPEKLKAMA 332 (357)
T ss_pred HHHHhCCCEEEeCCCCCccchHHHHHHHHHh----------CCCEEEeccccCCHHHHHHHHHHHhc----CHHHHHHHH
Confidence 99999999999765544 1 12222 35566665544 7777777777764 788888888
Q ss_pred HHH
Q 008154 545 RRG 547 (576)
Q Consensus 545 ~~a 547 (576)
.++
T Consensus 333 ~~a 335 (357)
T COG0707 333 ENA 335 (357)
T ss_pred HHH
Confidence 776
No 116
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=98.88 E-value=5e-08 Score=88.96 Aligned_cols=183 Identities=19% Similarity=0.190 Sum_probs=111.8
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 145 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (576)
.||+++..--.| ..-||.++++..|+..|++.||+|+|.+........ ..
T Consensus 2 kkIaIiGtrGIP-a~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~~~-----------------------------~~ 51 (185)
T PF09314_consen 2 KKIAIIGTRGIP-ARYGGFETFVEELAPRLVSKGIDVTVYCRSDYYPYK-----------------------------EF 51 (185)
T ss_pred ceEEEEeCCCCC-cccCcHHHHHHHHHHHHhcCCceEEEEEccCCCCCC-----------------------------Cc
Confidence 479999999888 568999999999999999999999999864222111 11
Q ss_pred eecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCc-cchHHHHHHh
Q 008154 146 YREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWH-AGLVPVLLAS 224 (576)
Q Consensus 146 ~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~-~~~~~~~l~~ 224 (576)
...|+++..++.+..- ....+.+-..++..++...... +.+.||+|++... ++++..+++.
T Consensus 52 ~y~gv~l~~i~~~~~g---------------~~~si~yd~~sl~~al~~~~~~---~~~~~ii~ilg~~~g~~~~~~~r~ 113 (185)
T PF09314_consen 52 EYNGVRLVYIPAPKNG---------------SAESIIYDFLSLLHALRFIKQD---KIKYDIILILGYGIGPFFLPFLRK 113 (185)
T ss_pred ccCCeEEEEeCCCCCC---------------chHHHHHHHHHHHHHHHHHhhc---cccCCEEEEEcCCccHHHHHHHHh
Confidence 2257888888644311 0112222222222232111100 1156899998765 4454444443
Q ss_pred hccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccC
Q 008154 225 KYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 304 (576)
Q Consensus 225 ~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS 304 (576)
... .+.++++++|.+...- ...+...+.+. .-.|+.+.+.||.+++.|
T Consensus 114 ~~~-----~g~~v~vN~DGlEWkR-------~KW~~~~k~~l--------------------k~~E~~avk~ad~lIaDs 161 (185)
T PF09314_consen 114 LRK-----KGGKVVVNMDGLEWKR-------AKWGRPAKKYL--------------------KFSEKLAVKYADRLIADS 161 (185)
T ss_pred hhh-----cCCcEEECCCcchhhh-------hhcCHHHHHHH--------------------HHHHHHHHHhCCEEEEcC
Confidence 221 4679999999763211 01111111110 135788899999999999
Q ss_pred ccchhhhccccCCcchhhhhhccCCceeEecCCCC
Q 008154 305 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGID 339 (576)
Q Consensus 305 ~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd 339 (576)
+...+.+.+ .++ ..+..+|++|.|
T Consensus 162 ~~I~~y~~~---------~y~--~~~s~~IaYGad 185 (185)
T PF09314_consen 162 KGIQDYIKE---------RYG--RKKSTFIAYGAD 185 (185)
T ss_pred HHHHHHHHH---------HcC--CCCcEEecCCCC
Confidence 998877642 233 356789999976
No 117
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=98.84 E-value=6.9e-08 Score=101.05 Aligned_cols=125 Identities=14% Similarity=0.131 Sum_probs=99.2
Q ss_pred HHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHH
Q 008154 398 DLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLY 475 (576)
Q Consensus 398 ~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lE 475 (576)
+..|++++.|.+ |+++|-| |-+.+ ....+..+ +.. .+++.+.++....+..+++.||+++.+|..|+++++++|
T Consensus 291 s~~I~~i~~Lv~~lPd~~f~I-ga~te-~s~kL~~L-~~y-~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~~~al~e 366 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYHFHI-AALTE-MSSKLMSL-DKY-DNVKLYPNITTQKIQELYQTCDIYLDINHGNEILNAVRR 366 (438)
T ss_pred HHHHHHHHHHHHhCCCcEEEE-EecCc-ccHHHHHH-Hhc-CCcEEECCcChHHHHHHHHhccEEEEccccccHHHHHHH
Confidence 999999999966 8999999 76643 22344444 344 677888998875667999999999999999999999999
Q ss_pred HHHcCCceEEeCcc-ccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHH
Q 008154 476 AMRYGTIPVVHATG-GLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGL 543 (576)
Q Consensus 476 Ama~G~pvIat~~g-g~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~ 543 (576)
|+..|+|+++-+.- +..+.+. .|.+++.+|+++++++|.+++. +++.+++.
T Consensus 367 A~~~G~pI~afd~t~~~~~~i~-------------~g~l~~~~~~~~m~~~i~~lL~----d~~~~~~~ 418 (438)
T TIGR02919 367 AFEYNLLILGFEETAHNRDFIA-------------SENIFEHNEVDQLISKLKDLLN----DPNQFREL 418 (438)
T ss_pred HHHcCCcEEEEecccCCccccc-------------CCceecCCCHHHHHHHHHHHhc----CHHHHHHH
Confidence 99999999997643 4445543 3788999999999999999975 66555543
No 118
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=98.52 E-value=2e-06 Score=75.92 Aligned_cols=107 Identities=18% Similarity=0.245 Sum_probs=66.0
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 146 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (576)
||++++... +.++.+++++|.+.|++|+++++..... . ...
T Consensus 1 KIl~i~~~~---------~~~~~~~~~~L~~~g~~V~ii~~~~~~~-----~-------------------------~~~ 41 (139)
T PF13477_consen 1 KILLIGNTP---------STFIYNLAKELKKRGYDVHIITPRNDYE-----K-------------------------YEI 41 (139)
T ss_pred CEEEEecCc---------HHHHHHHHHHHHHCCCEEEEEEcCCCch-----h-------------------------hhH
Confidence 588887642 3468899999999999999999843221 0 011
Q ss_pred ecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCcc-chHHHHHHhh
Q 008154 147 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHA-GLVPVLLASK 225 (576)
Q Consensus 147 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~-~~~~~~l~~~ 225 (576)
..++.++.++.+ ++ ....+.. .....+.++.. +|||||+|...+ ++.+.+++..
T Consensus 42 ~~~i~~~~~~~~---~k-------------~~~~~~~-~~~l~k~ik~~--------~~DvIh~h~~~~~~~~~~l~~~~ 96 (139)
T PF13477_consen 42 IEGIKVIRLPSP---RK-------------SPLNYIK-YFRLRKIIKKE--------KPDVIHCHTPSPYGLFAMLAKKL 96 (139)
T ss_pred hCCeEEEEecCC---CC-------------ccHHHHH-HHHHHHHhccC--------CCCEEEEecCChHHHHHHHHHHH
Confidence 256777777432 11 0111111 11333443333 799999999776 4555555443
Q ss_pred ccCCCCCCC-CcEEEEeecC
Q 008154 226 YRPHGVYKD-ARSILVIHNL 244 (576)
Q Consensus 226 ~~~~~~~~~-~~~v~t~H~~ 244 (576)
.+ +|+|+|.|+.
T Consensus 97 -------~~~~~~i~~~hg~ 109 (139)
T PF13477_consen 97 -------LKNKKVIYTVHGS 109 (139)
T ss_pred -------cCCCCEEEEecCC
Confidence 34 8999999975
No 119
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=98.26 E-value=0.00031 Score=72.67 Aligned_cols=186 Identities=11% Similarity=0.072 Sum_probs=103.6
Q ss_pred HhccceeccCccchhhhccccCCcchhhhhhccCCceeEecC-CCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHH
Q 008154 295 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITN-GIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 373 (576)
Q Consensus 295 ~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~n-Gvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 373 (576)
+.|+...+.++...+.+.+ -+.+..++.++-| ++|.-...... .+..+.+.
T Consensus 143 ~la~l~f~~t~~~~~~L~~----------eg~~~~~i~~tG~~~iD~l~~~~~~------------------~~~~~~~~ 194 (365)
T TIGR03568 143 KLSHLHFVATEEYRQRVIQ----------MGEDPDRVFNVGSPGLDNILSLDLL------------------SKEELEEK 194 (365)
T ss_pred HHHhhccCCCHHHHHHHHH----------cCCCCCcEEEECCcHHHHHHhhhcc------------------CHHHHHHH
Confidence 4567777777665554421 1334567777766 55532211111 03455667
Q ss_pred cCCCCCCCCCEEEEecccc--c---ccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHh--cCceEEEccCC
Q 008154 374 LGLPIRPDCPLIGFIGRLD--Y---QKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATY--KDKYRGWVGFN 446 (576)
Q Consensus 374 ~~i~~~~~~~~i~~~Gr~~--~---~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~--~~~~~~~~~~~ 446 (576)
+|++. ++..+++..-|-+ . .+.+..+++++..+. .++.+++-..+ +..+...+.+.+.. ..++......+
T Consensus 195 lgl~~-~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~-~~~~vi~P~~~-p~~~~i~~~i~~~~~~~~~v~l~~~l~ 271 (365)
T TIGR03568 195 LGIDL-DKPYALVTFHPVTLEKESAEEQIKELLKALDELN-KNYIFTYPNAD-AGSRIINEAIEEYVNEHPNFRLFKSLG 271 (365)
T ss_pred hCCCC-CCCEEEEEeCCCcccccCchHHHHHHHHHHHHhc-cCCEEEEeCCC-CCchHHHHHHHHHhcCCCCEEEECCCC
Confidence 77752 1234444444432 2 234555666665542 24433321121 22233333333322 23455555445
Q ss_pred hhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHH
Q 008154 447 VPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTAL 526 (576)
Q Consensus 447 ~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i 526 (576)
-.....+++.||++|-.| .|. +.||.++|+|+|+. +..+|.+.. |.+++.+ ..|++++.+++
T Consensus 272 ~~~~l~Ll~~a~~vitdS----Sgg-i~EA~~lg~Pvv~l--~~R~e~~~~----------g~nvl~v-g~~~~~I~~a~ 333 (365)
T TIGR03568 272 QERYLSLLKNADAVIGNS----SSG-IIEAPSFGVPTINI--GTRQKGRLR----------ADSVIDV-DPDKEEIVKAI 333 (365)
T ss_pred hHHHHHHHHhCCEEEEcC----hhH-HHhhhhcCCCEEee--cCCchhhhh----------cCeEEEe-CCCHHHHHHHH
Confidence 555668999999999443 233 38999999999954 467788776 6788877 44889888888
Q ss_pred HHH
Q 008154 527 RFA 529 (576)
Q Consensus 527 ~~~ 529 (576)
.++
T Consensus 334 ~~~ 336 (365)
T TIGR03568 334 EKL 336 (365)
T ss_pred HHH
Confidence 874
No 120
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=98.20 E-value=0.00016 Score=73.38 Aligned_cols=91 Identities=16% Similarity=0.231 Sum_probs=63.5
Q ss_pred CCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEE
Q 008154 381 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDIL 460 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~ 460 (576)
...++++.|..... .++++++.+ ++.+++++|..... . ...++. +.+++.+...++++.||++
T Consensus 192 ~~~iLv~~gg~~~~----~~~~~l~~~--~~~~~~v~g~~~~~--~--------~~~ni~-~~~~~~~~~~~~m~~ad~v 254 (318)
T PF13528_consen 192 EPKILVYFGGGGPG----DLIEALKAL--PDYQFIVFGPNAAD--P--------RPGNIH-VRPFSTPDFAELMAAADLV 254 (318)
T ss_pred CCEEEEEeCCCcHH----HHHHHHHhC--CCCeEEEEcCCccc--c--------cCCCEE-EeecChHHHHHHHHhCCEE
Confidence 45688888887655 667777775 45788888776311 0 133443 5566645566899999999
Q ss_pred EeCCCCCCCcHH-HHHHHHcCCceEEeCcccccc
Q 008154 461 LMPSRFEPCGLN-QLYAMRYGTIPVVHATGGLRD 493 (576)
Q Consensus 461 v~ps~~E~~g~s-~lEAma~G~pvIat~~gg~~e 493 (576)
|-. .|.+ ++||+++|+|+|.....+..|
T Consensus 255 Is~-----~G~~t~~Ea~~~g~P~l~ip~~~~~E 283 (318)
T PF13528_consen 255 ISK-----GGYTTISEALALGKPALVIPRPGQDE 283 (318)
T ss_pred EEC-----CCHHHHHHHHHcCCCEEEEeCCCCch
Confidence 965 4555 999999999999987655433
No 121
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=98.19 E-value=0.00055 Score=71.97 Aligned_cols=123 Identities=20% Similarity=0.192 Sum_probs=75.0
Q ss_pred CCCEEEEeccccc---ccCHHHHHHHHHhhhcCCcEEEE-EeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhc
Q 008154 381 DCPLIGFIGRLDY---QKGIDLIRLAAPEILADDIQFVM-LGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAG 456 (576)
Q Consensus 381 ~~~~i~~~Gr~~~---~Kg~~~ll~a~~~L~~~~~~lii-~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 456 (576)
+..++++.|.... .+-...+++++..+ +.++++ +|..... . .....++. ..++-+ ...++..
T Consensus 239 ~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~---~~~~i~~~g~~~~~-~-------~~~~~~v~-~~~~~p--~~~ll~~ 304 (401)
T cd03784 239 RPPVYVGFGSMVVRDPEALARLDVEAVATL---GQRAILSLGWGGLG-A-------EDLPDNVR-VVDFVP--HDWLLPR 304 (401)
T ss_pred CCcEEEeCCCCcccCHHHHHHHHHHHHHHc---CCeEEEEccCcccc-c-------cCCCCceE-EeCCCC--HHHHhhh
Confidence 4567777788753 34455666666654 556554 4544311 1 12233443 344422 2258999
Q ss_pred CCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccc----cccccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHHH
Q 008154 457 CDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG----LRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAI 530 (576)
Q Consensus 457 ~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg----~~e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~l 530 (576)
||++|.- +-..|.+||+++|+|+|.....+ +.+.+.. .+.|...+.. +.+++++++.+++
T Consensus 305 ~d~~I~h----gG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~----------~G~g~~l~~~~~~~~~l~~al~~~l 370 (401)
T cd03784 305 CAAVVHH----GGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAE----------LGAGPALDPRELTAERLAAALRRLL 370 (401)
T ss_pred hheeeec----CCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHH----------CCCCCCCCcccCCHHHHHHHHHHHh
Confidence 9999943 33488999999999999986543 2333333 3566666554 5788888888876
Q ss_pred H
Q 008154 531 R 531 (576)
Q Consensus 531 ~ 531 (576)
.
T Consensus 371 ~ 371 (401)
T cd03784 371 D 371 (401)
T ss_pred C
Confidence 4
No 122
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.14 E-value=0.001 Score=66.04 Aligned_cols=97 Identities=12% Similarity=0.063 Sum_probs=66.9
Q ss_pred CCEEEEecccccccCHHHHHHHHHhhhcCCcE-EEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEE
Q 008154 382 CPLIGFIGRLDYQKGIDLIRLAAPEILADDIQ-FVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDIL 460 (576)
Q Consensus 382 ~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~-lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~ 460 (576)
..++++.|...+.+....+++++..+.. +++ .+++|.+.+..++..+.... . .++. ..++.++ +..+|+.||+.
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~~-~~~i~vv~G~~~~~~~~l~~~~~~-~-~~i~-~~~~~~~-m~~lm~~aDl~ 245 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAESQI-NISITLVTGSSNPNLDELKKFAKE-Y-PNII-LFIDVEN-MAELMNEADLA 245 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhcccc-CceEEEEECCCCcCHHHHHHHHHh-C-CCEE-EEeCHHH-HHHHHHHCCEE
Confidence 3568888888877767788888877632 333 34678876555444444333 2 2444 3444444 55899999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEeCc
Q 008154 461 LMPSRFEPCGLNQLYAMRYGTIPVVHAT 488 (576)
Q Consensus 461 v~ps~~E~~g~s~lEAma~G~pvIat~~ 488 (576)
|.+ .|.|+.|++++|+|+|+...
T Consensus 246 Is~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 246 IGA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred EEC-----CchHHHHHHHcCCCEEEEEe
Confidence 984 67999999999999998654
No 123
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.02 E-value=0.0022 Score=67.15 Aligned_cols=217 Identities=11% Similarity=-0.033 Sum_probs=118.1
Q ss_pred HHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHH
Q 008154 291 KGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIAL 370 (576)
Q Consensus 291 ~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 370 (576)
+...+.|+.+.+..+...+.+ .....++.++-|.+=.. ..... +
T Consensus 155 ~l~~~~a~~v~~~~~~t~~~l-------------~~~g~k~~~vGnPv~d~-l~~~~-------------------~--- 198 (396)
T TIGR03492 155 LMRSRRCLAVFVRDRLTARDL-------------RRQGVRASYLGNPMMDG-LEPPE-------------------R--- 198 (396)
T ss_pred HhhchhhCEEeCCCHHHHHHH-------------HHCCCeEEEeCcCHHhc-Ccccc-------------------c---
Confidence 334468888888776555443 32334777888776322 21111 0
Q ss_pred HHHcCCCCCCCC-CEEEEeccc-c-cccCHHHHHHHHHhhhc-CCcEEEEEeCCChhhHHHHHHHHH-HhcC--------
Q 008154 371 QKELGLPIRPDC-PLIGFIGRL-D-YQKGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEA-TYKD-------- 437 (576)
Q Consensus 371 ~~~~~i~~~~~~-~~i~~~Gr~-~-~~Kg~~~ll~a~~~L~~-~~~~lii~G~g~~~~~~~~~~~~~-~~~~-------- 437 (576)
.+++ ++. .++++.|.- . ..+++..++++++.|.+ +++++++.-.+....+...+.+.+ ....
T Consensus 199 ---~~l~--~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~ 273 (396)
T TIGR03492 199 ---KPLL--TGRFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSLSLEKLQAILEDLGWQLEGSSEDQT 273 (396)
T ss_pred ---cccC--CCCCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCCCHHHHHHHHHhcCceecCCccccc
Confidence 0332 233 344444533 3 45778899999999965 477777654222334444443332 1110
Q ss_pred ------ceEEEccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcce
Q 008154 438 ------KYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTG 511 (576)
Q Consensus 438 ------~~~~~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G 511 (576)
.+. +..+..+ ...+++.||++|.. .|++-.|++++|+|+|.....+......-+.... . -...+
T Consensus 274 ~~~~~~~~~-v~~~~~~-~~~~l~~ADlvI~r-----SGt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~--~-l~g~~ 343 (396)
T TIGR03492 274 SLFQKGTLE-VLLGRGA-FAEILHWADLGIAM-----AGTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQS--R-LLGGS 343 (396)
T ss_pred hhhccCceE-EEechHh-HHHHHHhCCEEEEC-----cCHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhH--h-hcCCE
Confidence 122 2223223 45799999999987 4667799999999999987332211111000000 0 00133
Q ss_pred eEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH---HhhhCCHHHHHHHHH
Q 008154 512 WSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG---MEKDYTWENAAIQYE 562 (576)
Q Consensus 512 ~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a---~~~~fs~~~~~~~y~ 562 (576)
+.+...+++.+++.+.+++. |++.+.+|.++. +......+++++...
T Consensus 344 ~~l~~~~~~~l~~~l~~ll~----d~~~~~~~~~~~~~~lg~~~a~~~ia~~i~ 393 (396)
T TIGR03492 344 VFLASKNPEQAAQVVRQLLA----DPELLERCRRNGQERMGPPGASARIAESIL 393 (396)
T ss_pred EecCCCCHHHHHHHHHHHHc----CHHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 44445678888888887764 777777766432 223345555555443
No 124
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=97.87 E-value=0.0005 Score=70.43 Aligned_cols=190 Identities=13% Similarity=0.055 Sum_probs=104.3
Q ss_pred HhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCC-CCCCCCCCCCCccccccCCcCCcccchHhHHHHHHH
Q 008154 295 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNG-IDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 373 (576)
Q Consensus 295 ~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nG-vd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 373 (576)
+.|+..++.++..++.+.+ .+.++++|.++-|- +|.-........ . .......
T Consensus 121 ~la~lhf~~t~~~~~~L~~----------~G~~~~rI~~vG~~~~D~l~~~~~~~~------------~----~~~~~~i 174 (346)
T PF02350_consen 121 KLAHLHFAPTEEARERLLQ----------EGEPPERIFVVGNPGIDALLQNKEEIE------------E----KYKNSGI 174 (346)
T ss_dssp HH-SEEEESSHHHHHHHHH----------TT--GGGEEE---HHHHHHHHHHHTTC------------C-----HHHHHH
T ss_pred hhhhhhccCCHHHHHHHHh----------cCCCCCeEEEEChHHHHHHHHhHHHHh------------h----hhhhHHH
Confidence 5788889988888777642 24567788888773 332100000000 0 0000111
Q ss_pred cCCCCCCCCCEEEEeccccc---ccCHHHHHHHHHhhhc-CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhH
Q 008154 374 LGLPIRPDCPLIGFIGRLDY---QKGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPI 449 (576)
Q Consensus 374 ~~i~~~~~~~~i~~~Gr~~~---~Kg~~~ll~a~~~L~~-~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (576)
.... ++..++++.=|.+. ......+.++++.|.+ +++++++.....|.........-..+ .++..+.+.....
T Consensus 175 ~~~~--~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~~~~~i~~~l~~~-~~v~~~~~l~~~~ 251 (346)
T PF02350_consen 175 LQDA--PKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPRGSDIIIEKLKKY-DNVRLIEPLGYEE 251 (346)
T ss_dssp HHCT--TSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HHHHHHHHHHHTT--TTEEEE----HHH
T ss_pred Hhcc--CCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCchHHHHHHHHhccc-CCEEEECCCCHHH
Confidence 1112 35566666655442 3556788888888876 48888887765443333333222233 3777777666666
Q ss_pred HHHHHhcCCEEEeCCCCCCCcHHHH-HHHHcCCceEEe-CccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHH
Q 008154 450 SHRITAGCDILLMPSRFEPCGLNQL-YAMRYGTIPVVH-ATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALR 527 (576)
Q Consensus 450 ~~~ll~~~Dv~v~ps~~E~~g~s~l-EAma~G~pvIat-~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~ 527 (576)
...+++.|+++|--| | .+. ||.++|+|+|.- +.|...+.... +.+.+ ++ .|.+++.+++.
T Consensus 252 ~l~ll~~a~~vvgdS-----s-GI~eEa~~lg~P~v~iR~~geRqe~r~~----------~~nvl-v~-~~~~~I~~ai~ 313 (346)
T PF02350_consen 252 YLSLLKNADLVVGDS-----S-GIQEEAPSLGKPVVNIRDSGERQEGRER----------GSNVL-VG-TDPEAIIQAIE 313 (346)
T ss_dssp HHHHHHHESEEEESS-----H-HHHHHGGGGT--EEECSSS-S-HHHHHT----------TSEEE-ET-SSHHHHHHHHH
T ss_pred HHHHHhcceEEEEcC-----c-cHHHHHHHhCCeEEEecCCCCCHHHHhh----------cceEE-eC-CCHHHHHHHHH
Confidence 668999999998654 5 666 999999999997 56777777776 55555 65 68999999999
Q ss_pred HHHH
Q 008154 528 FAIR 531 (576)
Q Consensus 528 ~~l~ 531 (576)
+++.
T Consensus 314 ~~l~ 317 (346)
T PF02350_consen 314 KALS 317 (346)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8886
No 125
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=97.81 E-value=0.0042 Score=62.86 Aligned_cols=131 Identities=18% Similarity=0.133 Sum_probs=74.6
Q ss_pred HHHHHHcCCCCCCCCCEEEEeccccccc-----C-HHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEE
Q 008154 368 IALQKELGLPIRPDCPLIGFIGRLDYQK-----G-IDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRG 441 (576)
Q Consensus 368 ~~~~~~~~i~~~~~~~~i~~~Gr~~~~K-----g-~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~ 441 (576)
....+.+|++ ++ .+|+. |++..| | -..+-+.++.|.+..-.++++-...++ .+ +.+.++ +..
T Consensus 168 ~~vl~~lg~~--~~-~yIvv--R~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~~-~~----~~~~~~--~~i 235 (335)
T PF04007_consen 168 PEVLKELGLD--DE-PYIVV--RPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYEDQ-RE----LFEKYG--VII 235 (335)
T ss_pred hhHHHHcCCC--CC-CEEEE--EeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcch-hh----HHhccC--ccc
Confidence 4566788865 33 34432 444322 2 133445666665543335555544321 11 222332 221
Q ss_pred EccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccc---cccccccccccccCCCCCcceeEeCCCC
Q 008154 442 WVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG---LRDTVENFNPFAREGSGEGTGWSFLPLS 518 (576)
Q Consensus 442 ~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg---~~e~i~~~~~~~~~~~~~~~G~~~~~~d 518 (576)
... ..+ ...++..||++|- +.|+-..||...|+|.|++..|- ..+.+. +.|.++...|
T Consensus 236 ~~~-~vd-~~~Ll~~a~l~Ig-----~ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~------------~~Gll~~~~~ 296 (335)
T PF04007_consen 236 PPE-PVD-GLDLLYYADLVIG-----GGGTMAREAALLGTPAISCFPGKLLAVDKYLI------------EKGLLYHSTD 296 (335)
T ss_pred cCC-CCC-HHHHHHhcCEEEe-----CCcHHHHHHHHhCCCEEEecCCcchhHHHHHH------------HCCCeEecCC
Confidence 111 111 2368999999984 45788899999999999986543 334443 4688888889
Q ss_pred HHHHHHHHHHH
Q 008154 519 EESMLTALRFA 529 (576)
Q Consensus 519 ~~~la~~i~~~ 529 (576)
++++.+.+.+.
T Consensus 297 ~~ei~~~v~~~ 307 (335)
T PF04007_consen 297 PDEIVEYVRKN 307 (335)
T ss_pred HHHHHHHHHHh
Confidence 98877755444
No 126
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.70 E-value=0.0011 Score=69.35 Aligned_cols=183 Identities=15% Similarity=-0.021 Sum_probs=91.8
Q ss_pred HHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHH--hcCceEEEccCC
Q 008154 371 QKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEAT--YKDKYRGWVGFN 446 (576)
Q Consensus 371 ~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~--~~~~~~~~~~~~ 446 (576)
|+.+|+| ++.++++...+ ..|=-+..++.+.++.+ ++.+|++............+.+++. ...++++....+
T Consensus 276 R~~~gLp--~d~vvF~~fn~--~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~~~~~l~~~~~~~Gv~~~Ri~f~~~~~ 351 (468)
T PF13844_consen 276 RAQYGLP--EDAVVFGSFNN--LFKISPETLDLWARILKAVPNSRLWLLRFPASGEARLRRRFAAHGVDPDRIIFSPVAP 351 (468)
T ss_dssp TGGGT----SSSEEEEE-S---GGG--HHHHHHHHHHHHHSTTEEEEEEETSTTHHHHHHHHHHHTTS-GGGEEEEE---
T ss_pred HHHcCCC--CCceEEEecCc--cccCCHHHHHHHHHHHHhCCCcEEEEeeCCHHHHHHHHHHHHHcCCChhhEEEcCCCC
Confidence 5678888 56666665554 45667777888877765 7888888765532222223333221 124565433223
Q ss_pred hhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHH
Q 008154 447 VPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTAL 526 (576)
Q Consensus 447 ~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i 526 (576)
.+.-...++.+||+|-|..+ +-|++.+||+.+|+|||+-....+..-+..--.. .-|-.-|+.. |.++..+.-
T Consensus 352 ~~ehl~~~~~~DI~LDT~p~-nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~----~lGl~ElIA~--s~~eYv~~A 424 (468)
T PF13844_consen 352 REEHLRRYQLADICLDTFPY-NGGTTTLDALWMGVPVVTLPGETMASRVGASILR----ALGLPELIAD--SEEEYVEIA 424 (468)
T ss_dssp HHHHHHHGGG-SEEE--SSS---SHHHHHHHHHT--EEB---SSGGGSHHHHHHH----HHT-GGGB-S--SHHHHHHHH
T ss_pred HHHHHHHhhhCCEEeeCCCC-CCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHH----HcCCchhcCC--CHHHHHHHH
Confidence 33333567899999998644 5579999999999999985433322211100000 0022223322 555554443
Q ss_pred HHHHHHhhhCHHHHHHHHHHH---H--hhhCCHHHHHHHHHHHHHHh
Q 008154 527 RFAIRTYREHKSSWEGLMRRG---M--EKDYTWENAAIQYEQVFEWA 568 (576)
Q Consensus 527 ~~~l~~~~~~~~~~~~~~~~a---~--~~~fs~~~~~~~y~~~y~~~ 568 (576)
.++- .|++.+.++.++- + +.-|+-..+++++++.|+.+
T Consensus 425 v~La----~D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~m 467 (468)
T PF13844_consen 425 VRLA----TDPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQM 467 (468)
T ss_dssp HHHH----H-HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHH
T ss_pred HHHh----CCHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHh
Confidence 3333 3555555444332 2 23699999999999999875
No 127
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=97.67 E-value=0.0068 Score=61.07 Aligned_cols=165 Identities=16% Similarity=0.057 Sum_probs=99.0
Q ss_pred HHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHH
Q 008154 292 GAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQ 371 (576)
Q Consensus 292 ~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 371 (576)
...+.+|++.++=++-.+.. ....-..+.|-+..-.. .+-.. +++.++
T Consensus 132 ~i~~~~D~lLailPFE~~~y-------------~k~g~~~~yVGHpl~d~--i~~~~-----------------~r~~ar 179 (381)
T COG0763 132 KIAKYVDHLLAILPFEPAFY-------------DKFGLPCTYVGHPLADE--IPLLP-----------------DREAAR 179 (381)
T ss_pred HHHHHhhHeeeecCCCHHHH-------------HhcCCCeEEeCChhhhh--ccccc-----------------cHHHHH
Confidence 34578999999888655433 32333345555543211 11111 156799
Q ss_pred HHcCCCCCCCCCEEEEec-cccc-ccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCCh
Q 008154 372 KELGLPIRPDCPLIGFIG-RLDY-QKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNV 447 (576)
Q Consensus 372 ~~~~i~~~~~~~~i~~~G-r~~~-~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (576)
+.++++.+.. .+.+..| |-.. .+-...+++|+++|.. ++.++++--... .++................++ .+
T Consensus 180 ~~l~~~~~~~-~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~-~~~~~~~~~~~~~~~~~~~~~--~~ 255 (381)
T COG0763 180 EKLGIDADEK-TLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNA-KYRRIIEEALKWEVAGLSLIL--ID 255 (381)
T ss_pred HHhCCCCCCC-eEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcH-HHHHHHHHHhhccccCceEEe--cC
Confidence 9999985433 3344444 4444 5567889999999985 688888755442 223333322221111122222 23
Q ss_pred hHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEe-Ccccccccccc
Q 008154 448 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH-ATGGLRDTVEN 497 (576)
Q Consensus 448 ~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat-~~gg~~e~i~~ 497 (576)
......+..||+.+.. +|++.+|+|.+|+|.|++ ...++.-++..
T Consensus 256 ~~~~~a~~~aD~al~a-----SGT~tLE~aL~g~P~Vv~Yk~~~it~~iak 301 (381)
T COG0763 256 GEKRKAFAAADAALAA-----SGTATLEAALAGTPMVVAYKVKPITYFIAK 301 (381)
T ss_pred chHHHHHHHhhHHHHh-----ccHHHHHHHHhCCCEEEEEeccHHHHHHHH
Confidence 3455789999998765 699999999999999986 46666554443
No 128
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=97.63 E-value=0.00067 Score=70.09 Aligned_cols=179 Identities=18% Similarity=0.160 Sum_probs=91.3
Q ss_pred eEEEEeec---------cCCccccCcHHHHHhhHHHHHHhC--------CC----cEEEEEecCCCCCCcccchhccccC
Q 008154 67 NIVFVTAE---------AAPYSKTGGLGDVCGSLPVALAAR--------GH----RVMVVSPRYFNGTAADENFTLAKDL 125 (576)
Q Consensus 67 kI~~~s~e---------~~P~~~~GG~~~~~~~la~~l~~~--------G~----~V~vi~~~~~~~~~~~~~~~~~~~~ 125 (576)
+|+++|.. -.| ..||.-+|+.+++++|.+. |. +|.++|..-+..... .+.+.++
T Consensus 274 ~vvliSpHG~f~q~nvLG~p--DTGGQVvYVleqarALe~e~~~ri~~~gl~i~p~i~i~TRlIpd~~~t--~~~q~le- 348 (550)
T PF00862_consen 274 NVVLISPHGYFGQENVLGRP--DTGGQVVYVLEQARALENEMLYRIKLQGLDITPKIDIVTRLIPDAKGT--TCNQRLE- 348 (550)
T ss_dssp EEEEE--SS--STTSTTSST--TSSHHHHHHHHHHHHHHHHTHHHHHHTT-----EEEEEEE--TBTTCG--GGTSSEE-
T ss_pred EEEEEcCccccccccccCCC--CCCCcEEEEeHHHHHHHHHHHHHHHhcCCCCCCceeeecccccCCcCC--Ccccccc-
Confidence 79999975 345 3899999999999999763 44 477888554332111 0111100
Q ss_pred ceeEEEeecCCeeEEEEEEeeecCeEEEEecCC-------CCCCCCCCCCCCCCCCCchHHHHHHHHHHHH-hhcccCCC
Q 008154 126 GCCMKICCFGGEQEIAFFHEYREGVDWVFVDHP-------SYHRPGNPYGDINGAFGDNQFRYTLLCYAAC-EAPLVLPL 197 (576)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~~-------~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~-~~~~~~~~ 197 (576)
- ..| -++..+++++-. .|..+..++.. ..+| ...+. ++...++
T Consensus 349 -----~-~~g-----------t~~a~IlRvPF~~~~gi~~kwisrf~lWPy--------Le~f---a~d~~~~i~~e~~- 399 (550)
T PF00862_consen 349 -----K-VSG-----------TENARILRVPFGPEKGILRKWISRFDLWPY--------LEEF---ADDAEREILAELQ- 399 (550)
T ss_dssp -----E-ETT-----------ESSEEEEEE-ESESTEEE-S---GGG-GGG--------HHHH---HHHHHHHHHHHHT-
T ss_pred -----c-cCC-----------CCCcEEEEecCCCCcchhhhccchhhchhh--------HHHH---HHHHHHHHHHHhC-
Confidence 0 000 134667777611 13333333331 2222 22221 2222222
Q ss_pred CCCCCCCccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccc
Q 008154 198 GGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWAR 277 (576)
Q Consensus 198 ~~~~~~~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (576)
.+||.||.|...+++++.+++.+. ++|..+|-|+.. ...+...++..+.+..
T Consensus 400 -----~~PdlI~GnYsDgnlvA~LLs~~l-------gv~~~~iaHsLe------k~Ky~~s~~~w~e~e~---------- 451 (550)
T PF00862_consen 400 -----GKPDLIIGNYSDGNLVASLLSRKL-------GVTQCFIAHSLE------KTKYEDSDLYWKEIEE---------- 451 (550)
T ss_dssp -----S--SEEEEEHHHHHHHHHHHHHHH-------T-EEEEE-SS-H------HHHHHTTTTTSHHHHH----------
T ss_pred -----CCCcEEEeccCcchHHHHHHHhhc-------CCceehhhhccc------cccccccCCCHHHHHh----------
Confidence 279999999988999999998874 799999999862 1111212222221111
Q ss_pred cccCCcCccchhHHHHHHhccceeccCccchhhhc
Q 008154 278 THALDTGEAVNVLKGAIVTADRLLTVSKGYSWEIT 312 (576)
Q Consensus 278 ~~~~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~ 312 (576)
.+.+..++.-+..|++.||.|++-+ .+++.
T Consensus 452 --~Yhfs~qftAd~iamn~adfIItST---~QEI~ 481 (550)
T PF00862_consen 452 --KYHFSCQFTADLIAMNAADFIITST---YQEIA 481 (550)
T ss_dssp --HH-HHHHHHHHHHHHHHSSEEEESS---HHHHH
T ss_pred --hccchhhhhHHHHHhhcCCEEEEcc---hHhhc
Confidence 1112444667788999999999843 34543
No 129
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=97.61 E-value=0.11 Score=53.20 Aligned_cols=211 Identities=14% Similarity=0.079 Sum_probs=122.6
Q ss_pred hhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhH
Q 008154 288 NVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCK 367 (576)
Q Consensus 288 ~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 367 (576)
.+.+..+...|.|++-|+.-++... .....++.+.-| +........ ......
T Consensus 169 ~~~~~~~~~i~li~aQse~D~~Rf~------------~LGa~~v~v~GN---lKfd~~~~~-------------~~~~~~ 220 (419)
T COG1519 169 FLARLLFKNIDLILAQSEEDAQRFR------------SLGAKPVVVTGN---LKFDIEPPP-------------QLAAEL 220 (419)
T ss_pred HHHHHHHHhcceeeecCHHHHHHHH------------hcCCcceEEecc---eeecCCCCh-------------hhHHHH
Confidence 3566777899999999997776543 222333444433 121111111 111224
Q ss_pred HHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhc---------
Q 008154 368 IALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYK--------- 436 (576)
Q Consensus 368 ~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~--------- 436 (576)
..++...+.+ +.+++.++.. ..--+.++++...|++ ++..+|++= -||+.-...+.+.+...
T Consensus 221 ~~~r~~l~~~----r~v~iaaSTH--~GEeei~l~~~~~l~~~~~~~llIlVP-RHpERf~~v~~l~~~~gl~~~~rS~~ 293 (419)
T COG1519 221 AALRRQLGGH----RPVWVAASTH--EGEEEIILDAHQALKKQFPNLLLILVP-RHPERFKAVENLLKRKGLSVTRRSQG 293 (419)
T ss_pred HHHHHhcCCC----CceEEEecCC--CchHHHHHHHHHHHHhhCCCceEEEec-CChhhHHHHHHHHHHcCCeEEeecCC
Confidence 5667766632 6778887772 2234568899988877 356666554 44433222333322211
Q ss_pred -----C-ceEEEccCChhHHHHHHhcCCEEEeCC-CCCCCcHHHHHHHHcCCceEEeC-ccccccccccccccccCCCCC
Q 008154 437 -----D-KYRGWVGFNVPISHRITAGCDILLMPS-RFEPCGLNQLYAMRYGTIPVVHA-TGGLRDTVENFNPFAREGSGE 508 (576)
Q Consensus 437 -----~-~~~~~~~~~~~~~~~ll~~~Dv~v~ps-~~E~~g~s~lEAma~G~pvIat~-~gg~~e~i~~~~~~~~~~~~~ 508 (576)
. +++ +. -+.-++..+|+.+|+.+.-- ..+--|--++|++++|+|+|+-. .-.+.|+..... ..
T Consensus 294 ~~~~~~tdV~-l~-DtmGEL~l~y~~adiAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~-------~~ 364 (419)
T COG1519 294 DPPFSDTDVL-LG-DTMGELGLLYGIADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLL-------QA 364 (419)
T ss_pred CCCCCCCcEE-EE-ecHhHHHHHHhhccEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHH-------hc
Confidence 1 221 22 23445667999999987754 45566788999999999999953 445555554411 13
Q ss_pred cceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHH
Q 008154 509 GTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGM 548 (576)
Q Consensus 509 ~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a~ 548 (576)
+.|+.++ |.+.++.++..++ .|++.+.++++++.
T Consensus 365 ga~~~v~--~~~~l~~~v~~l~----~~~~~r~~~~~~~~ 398 (419)
T COG1519 365 GAGLQVE--DADLLAKAVELLL----ADEDKREAYGRAGL 398 (419)
T ss_pred CCeEEEC--CHHHHHHHHHHhc----CCHHHHHHHHHHHH
Confidence 4566664 4555555555443 47888888888873
No 130
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.53 E-value=0.03 Score=56.64 Aligned_cols=222 Identities=14% Similarity=0.041 Sum_probs=127.9
Q ss_pred HhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHH-
Q 008154 295 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE- 373 (576)
Q Consensus 295 ~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~- 373 (576)
..|+..++.++..++.+.+. +.+..+|.++-|-+- +.+.... .+..........
T Consensus 144 ~~S~~hfapte~ar~nLl~E----------G~~~~~IfvtGnt~i-Dal~~~~--------------~~~~~~~~~~~~~ 198 (383)
T COG0381 144 HLSDLHFAPTEIARKNLLRE----------GVPEKRIFVTGNTVI-DALLNTR--------------DRVLEDSKILAKG 198 (383)
T ss_pred HhhhhhcCChHHHHHHHHHc----------CCCccceEEeCChHH-HHHHHHH--------------hhhccchhhHHhh
Confidence 46777888887776665321 345667888888642 1111000 000000111111
Q ss_pred cCCCCCCCCCEEEEeccccc-ccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhc--CceEEEccCChh
Q 008154 374 LGLPIRPDCPLIGFIGRLDY-QKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYK--DKYRGWVGFNVP 448 (576)
Q Consensus 374 ~~i~~~~~~~~i~~~Gr~~~-~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 448 (576)
++.. .++.+++++=|-+. .+++..+++++.++.+ +++.++.----.+...+.. ...+. .++..+.+.+-.
T Consensus 199 ~~~~--~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~~~~v~e~~---~~~L~~~~~v~li~pl~~~ 273 (383)
T COG0381 199 LDDK--DKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHPRPRVRELV---LKRLKNVERVKLIDPLGYL 273 (383)
T ss_pred hccc--cCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCCChhhhHHH---HHHhCCCCcEEEeCCcchH
Confidence 2222 34566777766653 4999999999999876 3566555433322222222 12232 346667766655
Q ss_pred HHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeC-ccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHH
Q 008154 449 ISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA-TGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALR 527 (576)
Q Consensus 449 ~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~-~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~ 527 (576)
....++..|-+.+- .+|...=||-..|+||++-+ .-..+|.+.. ++-.++.. |.+.+.+++.
T Consensus 274 ~f~~L~~~a~~ilt-----DSGgiqEEAp~lg~Pvl~lR~~TERPE~v~a-----------gt~~lvg~-~~~~i~~~~~ 336 (383)
T COG0381 274 DFHNLMKNAFLILT-----DSGGIQEEAPSLGKPVLVLRDTTERPEGVEA-----------GTNILVGT-DEENILDAAT 336 (383)
T ss_pred HHHHHHHhceEEEe-----cCCchhhhHHhcCCcEEeeccCCCCccceec-----------CceEEeCc-cHHHHHHHHH
Confidence 55567777755543 45777889999999999965 4566777654 44455443 6787777777
Q ss_pred HHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHH
Q 008154 528 FAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEW 567 (576)
Q Consensus 528 ~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~ 567 (576)
.++. +++..++|+... ...-.+.+++++-....+..
T Consensus 337 ~ll~----~~~~~~~m~~~~npYgdg~as~rIv~~l~~~~~~ 374 (383)
T COG0381 337 ELLE----DEEFYERMSNAKNPYGDGNASERIVEILLNYFDS 374 (383)
T ss_pred HHhh----ChHHHHHHhcccCCCcCcchHHHHHHHHHHHhhh
Confidence 7765 777777776543 22222555666555554443
No 131
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=97.50 E-value=0.0014 Score=59.20 Aligned_cols=147 Identities=16% Similarity=0.037 Sum_probs=78.7
Q ss_pred cCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhhcc
Q 008154 148 EGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYR 227 (576)
Q Consensus 148 ~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~~ 227 (576)
+||+++....+.-.. ...+. |......-..-+.++.+++..+....| .||||..|.+.+. +++++...
T Consensus 19 ~GV~~~~y~~~~~~~-~~~~~-----~~~~~e~~~~rg~av~~a~~~L~~~Gf---~PDvI~~H~GWGe--~Lflkdv~- 86 (171)
T PF12000_consen 19 PGVRVVRYRPPRGPT-PGTHP-----YVRDFEAAVLRGQAVARAARQLRAQGF---VPDVIIAHPGWGE--TLFLKDVF- 86 (171)
T ss_pred CCcEEEEeCCCCCCC-CCCCc-----ccccHHHHHHHHHHHHHHHHHHHHcCC---CCCEEEEcCCcch--hhhHHHhC-
Confidence 477777775422111 11121 223344445556666666666655455 8999999974443 24455444
Q ss_pred CCCCCCCCcEEEEe----ecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccch-hHHHHHHhccceec
Q 008154 228 PHGVYKDARSILVI----HNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVN-VLKGAIVTADRLLT 302 (576)
Q Consensus 228 ~~~~~~~~~~v~t~----H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~a~~~ad~v~~ 302 (576)
+++|+|..+ |+....--|.++. ......... ....| ...+++..||..++
T Consensus 87 -----P~a~li~Y~E~~y~~~g~d~~FDpe~----p~~~~~~~~----------------~r~rN~~~l~~l~~~D~~is 141 (171)
T PF12000_consen 87 -----PDAPLIGYFEFYYRASGADVGFDPEF----PPSLDDRAR----------------LRMRNAHNLLALEQADAGIS 141 (171)
T ss_pred -----CCCcEEEEEEEEecCCCCcCCCCCCC----CCCHHHHHH----------------HHHHhHHHHHHHHhCCcCcC
Confidence 788887443 2222111233321 111111000 00012 35567889999999
Q ss_pred cCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCC
Q 008154 303 VSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEW 343 (576)
Q Consensus 303 vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~ 343 (576)
.+.+.++..- ..-..||.||.-|||++.+
T Consensus 142 PT~wQ~~~fP------------~~~r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 142 PTRWQRSQFP------------AEFRSKISVIHDGIDTDRF 170 (171)
T ss_pred CCHHHHHhCC------------HHHHcCcEEeecccchhhc
Confidence 9887664321 2235689999999998754
No 132
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=97.34 E-value=0.041 Score=56.53 Aligned_cols=198 Identities=19% Similarity=0.098 Sum_probs=109.3
Q ss_pred HHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHH
Q 008154 291 KGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIAL 370 (576)
Q Consensus 291 ~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 370 (576)
+...+.+|.+.++=++-.+. +.....++..+-|..= +...+... ....
T Consensus 128 ~~i~~~~D~ll~ifPFE~~~-------------y~~~g~~~~~VGHPl~-d~~~~~~~------------------~~~~ 175 (373)
T PF02684_consen 128 KKIKKYVDHLLVIFPFEPEF-------------YKKHGVPVTYVGHPLL-DEVKPEPD------------------RAEA 175 (373)
T ss_pred HHHHHHHhheeECCcccHHH-------------HhccCCCeEEECCcch-hhhccCCC------------------HHHH
Confidence 33446789998887754433 3333445666666542 11211111 3445
Q ss_pred HHHcCCCCCCCCC-EEEEec-cccc-ccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccC
Q 008154 371 QKELGLPIRPDCP-LIGFIG-RLDY-QKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF 445 (576)
Q Consensus 371 ~~~~~i~~~~~~~-~i~~~G-r~~~-~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (576)
++.+ ++ ++.. +.+..| |-.. .+.+..++++++++.+ +++++++.... ....+............+.....
T Consensus 176 ~~~~-l~--~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~-~~~~~~i~~~~~~~~~~~~~~~~- 250 (373)
T PF02684_consen 176 REKL-LD--PDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAP-EVHEELIEEILAEYPPDVSIVII- 250 (373)
T ss_pred HHhc-CC--CCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCC-HHHHHHHHHHHHhhCCCCeEEEc-
Confidence 5555 55 3444 444555 4444 4556999999999987 58888876543 33444344433333222222221
Q ss_pred ChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEe-Ccccccccccccccccc------CCCC--CcceeEeCC
Q 008154 446 NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH-ATGGLRDTVENFNPFAR------EGSG--EGTGWSFLP 516 (576)
Q Consensus 446 ~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat-~~gg~~e~i~~~~~~~~------~~~~--~~~G~~~~~ 516 (576)
.......++.||+.+.. +|++-+|++.+|+|.|.. ..+++.-++...--... ...+ -..-++-+.
T Consensus 251 -~~~~~~~m~~ad~al~~-----SGTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~ 324 (373)
T PF02684_consen 251 -EGESYDAMAAADAALAA-----SGTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQED 324 (373)
T ss_pred -CCchHHHHHhCcchhhc-----CCHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhccc
Confidence 12245689999998866 599999999999999985 44554443332110000 0000 001111134
Q ss_pred CCHHHHHHHHHHHHH
Q 008154 517 LSEESMLTALRFAIR 531 (576)
Q Consensus 517 ~d~~~la~~i~~~l~ 531 (576)
.+++.+++++..++.
T Consensus 325 ~~~~~i~~~~~~ll~ 339 (373)
T PF02684_consen 325 ATPENIAAELLELLE 339 (373)
T ss_pred CCHHHHHHHHHHHhc
Confidence 478888888887775
No 133
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=97.27 E-value=0.1 Score=52.99 Aligned_cols=92 Identities=13% Similarity=0.076 Sum_probs=55.3
Q ss_pred CCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEE
Q 008154 382 CPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILL 461 (576)
Q Consensus 382 ~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v 461 (576)
..++++.|. -+...+++++..+ +++.++ +|+.+.. .. ....++. +.++..+....++..||++|
T Consensus 189 ~~iLv~~g~----~~~~~l~~~l~~~--~~~~~i-~~~~~~~-~~-------~~~~~v~-~~~~~~~~~~~~l~~ad~vI 252 (321)
T TIGR00661 189 DYILVYIGF----EYRYKILELLGKI--ANVKFV-CYSYEVA-KN-------SYNENVE-IRRITTDNFKELIKNAELVI 252 (321)
T ss_pred CcEEEECCc----CCHHHHHHHHHhC--CCeEEE-EeCCCCC-cc-------ccCCCEE-EEECChHHHHHHHHhCCEEE
Confidence 345555443 2455667777665 344444 3543211 11 1223443 33555444567999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEeCcccccc
Q 008154 462 MPSRFEPCGLNQLYAMRYGTIPVVHATGGLRD 493 (576)
Q Consensus 462 ~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e 493 (576)
.-+= ..+++||+++|+|+|.....+..|
T Consensus 253 ~~~G----~~t~~Ea~~~g~P~l~ip~~~~~e 280 (321)
T TIGR00661 253 THGG----FSLISEALSLGKPLIVIPDLGQFE 280 (321)
T ss_pred ECCC----hHHHHHHHHcCCCEEEEcCCCccc
Confidence 8752 247999999999999988765434
No 134
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=96.98 E-value=0.03 Score=54.98 Aligned_cols=167 Identities=12% Similarity=0.044 Sum_probs=104.6
Q ss_pred CCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEE-EeC--CChhhHHHHHHHHH-Hhc-CceEEEccC-ChhHHHHHH
Q 008154 381 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVM-LGS--GDPQFESWMRDTEA-TYK-DKYRGWVGF-NVPISHRIT 454 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii-~G~--g~~~~~~~~~~~~~-~~~-~~~~~~~~~-~~~~~~~ll 454 (576)
+.++|+.-.+=++..++..+++++.+....++++++ .|- |++.+.+.+..... .+. +++..+..+ +-++-..++
T Consensus 145 ~~~tIlvGNSgd~SN~Hie~L~~l~~~~~~~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL 224 (322)
T PRK02797 145 GKMTILVGNSGDRSNRHIEALRALHQQFGDNVKIIVPMGYPANNQAYIEEVRQAGLALFGAENFQILTEKLPFDDYLALL 224 (322)
T ss_pred CceEEEEeCCCCCcccHHHHHHHHHHHhCCCeEEEEECCcCCCCHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHHHHH
Confidence 445555444556888899999999888778888887 344 44444444443333 444 566655554 334444799
Q ss_pred hcCCEEEeCCC-CCCCcHHHHHHHHcCCceEEeC-ccccccccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHHH
Q 008154 455 AGCDILLMPSR-FEPCGLNQLYAMRYGTIPVVHA-TGGLRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAI 530 (576)
Q Consensus 455 ~~~Dv~v~ps~-~E~~g~s~lEAma~G~pvIat~-~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~l 530 (576)
+.||+.++.-. .++.|+.++ .+.+|+||+.+. ..-|.+.... |... +++.+ |...+.++=+++
T Consensus 225 ~~~Dl~~f~~~RQQgiGnl~l-Li~~G~~v~l~r~n~fwqdl~e~----------gv~V-lf~~d~L~~~~v~e~~rql- 291 (322)
T PRK02797 225 RQCDLGYFIFARQQGIGTLCL-LIQLGKPVVLSRDNPFWQDLTEQ----------GLPV-LFTGDDLDEDIVREAQRQL- 291 (322)
T ss_pred HhCCEEEEeechhhHHhHHHH-HHHCCCcEEEecCCchHHHHHhC----------CCeE-EecCCcccHHHHHHHHHHH-
Confidence 99999998765 689998776 799999999974 6666665544 3333 23332 222222211111
Q ss_pred HHhhhCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhhCC
Q 008154 531 RTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASIDP 572 (576)
Q Consensus 531 ~~~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y~~~~~~~ 572 (576)
...-++.++ |+.++.++.|.++++.+....
T Consensus 292 ----------~~~dk~~I~--Ff~pn~~~~W~~~l~~~~g~~ 321 (322)
T PRK02797 292 ----------ASVDKNIIA--FFSPNYLQGWRNALAIAAGEV 321 (322)
T ss_pred ----------HhhCcceee--ecCHhHHHHHHHHHHHhhCCC
Confidence 111112122 999999999999998876543
No 135
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=96.93 E-value=0.099 Score=56.52 Aligned_cols=160 Identities=13% Similarity=0.075 Sum_probs=93.5
Q ss_pred HHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHH
Q 008154 291 KGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIAL 370 (576)
Q Consensus 291 ~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 370 (576)
+...+.+|++.++=++-.+. +.....++..+-|..= +..... .+ +..+
T Consensus 356 kki~k~vD~ll~IfPFE~~~-------------y~~~gv~v~yVGHPL~-d~i~~~-~~-----------------~~~~ 403 (608)
T PRK01021 356 TILEKYLDLLLLILPFEQNL-------------FKDSPLRTVYLGHPLV-ETISSF-SP-----------------NLSW 403 (608)
T ss_pred HHHHHHhhhheecCccCHHH-------------HHhcCCCeEEECCcHH-hhcccC-CC-----------------HHHH
Confidence 33446789999987765433 3334455666666542 111111 11 4567
Q ss_pred HHHcCCCCCCCCCEEEEec-cccc-ccCHHHHHHHHH--hhhcCCcEEEEEeCCChhhHHHHHHHHHHhc-CceEEEccC
Q 008154 371 QKELGLPIRPDCPLIGFIG-RLDY-QKGIDLIRLAAP--EILADDIQFVMLGSGDPQFESWMRDTEATYK-DKYRGWVGF 445 (576)
Q Consensus 371 ~~~~~i~~~~~~~~i~~~G-r~~~-~Kg~~~ll~a~~--~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~-~~~~~~~~~ 445 (576)
++.+|+++ ++..+.+..| |-.. .+.+..+++|++ ++.+ +.++++.. .++...+..+...+... ..+....+
T Consensus 404 r~~lgl~~-~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~~-~l~fvvp~-a~~~~~~~i~~~~~~~~~~~~~ii~~- 479 (608)
T PRK01021 404 KEQLHLPS-DKPIVAAFPGSRRGDILRNLTIQVQAFLASSLAS-THQLLVSS-ANPKYDHLILEVLQQEGCLHSHIVPS- 479 (608)
T ss_pred HHHcCCCC-CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhcc-CeEEEEec-CchhhHHHHHHHHhhcCCCCeEEecC-
Confidence 88889863 2334445555 4444 566788999998 5543 67887753 33333333333322222 12222222
Q ss_pred ChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEe-Ccccccc
Q 008154 446 NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH-ATGGLRD 493 (576)
Q Consensus 446 ~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat-~~gg~~e 493 (576)
+....+++.||+.+.. +|++-+|++.+|+|.|+. ..+++.-
T Consensus 480 --~~~~~~m~aaD~aLaa-----SGTaTLEaAL~g~PmVV~YK~s~Lty 521 (608)
T PRK01021 480 --QFRYELMRECDCALAK-----CGTIVLETALNQTPTIVTCQLRPFDT 521 (608)
T ss_pred --cchHHHHHhcCeeeec-----CCHHHHHHHHhCCCEEEEEecCHHHH
Confidence 1135789999999876 599999999999999985 4454443
No 136
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=96.75 E-value=0.047 Score=57.16 Aligned_cols=156 Identities=14% Similarity=0.096 Sum_probs=84.2
Q ss_pred CCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEE-EeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCE
Q 008154 381 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVM-LGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDI 459 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii-~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv 459 (576)
...+++..|+....+. ..+-.+++.+.+.+.++++ +|.+.. ....+ ....++. ..++.+. ..++..||+
T Consensus 225 ~~~v~vs~Gs~~~~~~-~~~~~~~~al~~~~~~~i~~~g~~~~--~~~~~----~~~~~v~-~~~~~p~--~~ll~~~~~ 294 (392)
T TIGR01426 225 RPVVLISLGTVFNNQP-SFYRTCVEAFRDLDWHVVLSVGRGVD--PADLG----ELPPNVE-VRQWVPQ--LEILKKADA 294 (392)
T ss_pred CCEEEEecCccCCCCH-HHHHHHHHHHhcCCCeEEEEECCCCC--hhHhc----cCCCCeE-EeCCCCH--HHHHhhCCE
Confidence 3456677788644332 2322333334444666554 455431 11111 1233443 3444332 268999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEeCccccc----cccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHHHHHh
Q 008154 460 LLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLR----DTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAIRTY 533 (576)
Q Consensus 460 ~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~----e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~l~~~ 533 (576)
+|..+ +. .|.+||+++|+|.|+....+-. +.+.. .+.|..+... ++++++++|.+++.
T Consensus 295 ~I~hg---G~-~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~----------~g~g~~l~~~~~~~~~l~~ai~~~l~-- 358 (392)
T TIGR01426 295 FITHG---GM-NSTMEALFNGVPMVAVPQGADQPMTARRIAE----------LGLGRHLPPEEVTAEKLREAVLAVLS-- 358 (392)
T ss_pred EEECC---Cc-hHHHHHHHhCCCEEecCCcccHHHHHHHHHH----------CCCEEEeccccCCHHHHHHHHHHHhc--
Confidence 99754 22 4789999999999997544322 22332 3566666543 56888888888875
Q ss_pred hhCHHHHHHHHHH--HHhhhCCHHHHHHHHHHH
Q 008154 534 REHKSSWEGLMRR--GMEKDYTWENAAIQYEQV 564 (576)
Q Consensus 534 ~~~~~~~~~~~~~--a~~~~fs~~~~~~~y~~~ 564 (576)
|++.++++.+- .+...-..++.++...+.
T Consensus 359 --~~~~~~~~~~l~~~~~~~~~~~~aa~~i~~~ 389 (392)
T TIGR01426 359 --DPRYAERLRKMRAEIREAGGARRAADEIEGF 389 (392)
T ss_pred --CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHh
Confidence 55433332221 133344555666555443
No 137
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=96.70 E-value=0.061 Score=56.75 Aligned_cols=180 Identities=13% Similarity=0.081 Sum_probs=104.8
Q ss_pred HHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCC-hhhHHHHHHHHHHh---cCceEEEcc
Q 008154 371 QKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGD-PQFESWMRDTEATY---KDKYRGWVG 444 (576)
Q Consensus 371 ~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~-~~~~~~~~~~~~~~---~~~~~~~~~ 444 (576)
|...||| ++..+++..++ ..|-...++.-.-.+.+ ++-.|.+-|.|+ +.....++.+.+.. ..++++...
T Consensus 421 R~~lglp--~~avVf~c~~n--~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~ 496 (620)
T COG3914 421 RAQLGLP--EDAVVFCCFNN--YFKITPEVFALWMQILSAVPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPP 496 (620)
T ss_pred hhhcCCC--CCeEEEEecCC--cccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCC
Confidence 5678998 56555555444 34554445544444433 677777777753 44556666665543 246666665
Q ss_pred CChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccc-----cccccccccccCCCCCcceeEeCCCCH
Q 008154 445 FNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLR-----DTVENFNPFAREGSGEGTGWSFLPLSE 519 (576)
Q Consensus 445 ~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~-----e~i~~~~~~~~~~~~~~~G~~~~~~d~ 519 (576)
...+.-.+-+.-+|+++-+..| +-++|..||+-+|+|||+---..+. .++.. -|..-++.. .+.
T Consensus 497 ~~~~~h~a~~~iADlvLDTyPY-~g~TTa~daLwm~vPVlT~~G~~FasR~~~si~~~---------agi~e~vA~-s~~ 565 (620)
T COG3914 497 APNEDHRARYGIADLVLDTYPY-GGHTTASDALWMGVPVLTRVGEQFASRNGASIATN---------AGIPELVAD-SRA 565 (620)
T ss_pred CCCHHHHHhhchhheeeecccC-CCccchHHHHHhcCceeeeccHHHHHhhhHHHHHh---------cCCchhhcC-CHH
Confidence 5556666789999999987655 5578999999999999984221111 11111 022222222 133
Q ss_pred HHHHHHHHHHHHHhhhCHHHHHHHHHH---HHhh--hCCHHHHHHHHHHHHHHhhh
Q 008154 520 ESMLTALRFAIRTYREHKSSWEGLMRR---GMEK--DYTWENAAIQYEQVFEWASI 570 (576)
Q Consensus 520 ~~la~~i~~~l~~~~~~~~~~~~~~~~---a~~~--~fs~~~~~~~y~~~y~~~~~ 570 (576)
+.++.+++-. .|+..+++...+ .+.+ -|+.+.+++++...|.++.+
T Consensus 566 dYV~~av~~g-----~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~M~~ 616 (620)
T COG3914 566 DYVEKAVAFG-----SDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWGMWS 616 (620)
T ss_pred HHHHHHHHhc-----ccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHHHHH
Confidence 3333333322 233333332221 1222 69999999999999998865
No 138
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.69 E-value=0.12 Score=51.93 Aligned_cols=192 Identities=12% Similarity=0.058 Sum_probs=114.5
Q ss_pred cCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHh
Q 008154 327 RKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPE 406 (576)
Q Consensus 327 ~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~ 406 (576)
-..+...+++++|.+.|.+.+.+ ..-.--+.++|.--+. +.+.+-+.+-.
T Consensus 159 ~~~~~~~~~~a~d~~~~~~i~~d-----------------------------a~~~~dL~~ign~~pD-r~e~~ke~~~~ 208 (373)
T COG4641 159 GARNCYYLPWAVDDSLFHPIPPD-----------------------------ASYDVDLNLIGNPYPD-RVEEIKEFFVE 208 (373)
T ss_pred cccceeccCccCCchhcccCCcc-----------------------------ccceeeeEEecCCCcc-HHHHHHHHhhc
Confidence 34567899999999988776532 0122346777765554 22332222211
Q ss_pred hhc---CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEeCCCC---CC-C--cHHHHHHH
Q 008154 407 ILA---DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRF---EP-C--GLNQLYAM 477 (576)
Q Consensus 407 L~~---~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps~~---E~-~--g~s~lEAm 477 (576)
=.. .+-++.+.|..-+. .- ....- ..+.+.++...- .......+..-|+.++-++. ++ + .+-+.|+|
T Consensus 209 ps~kl~v~rr~~~~g~~y~~-~~-~~~~~-~~~~~yIg~~~~-~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeia 284 (373)
T COG4641 209 PSFKLMVDRRFYVLGPRYPD-DI-WGRTW-EPNVQYIGYYNP-KDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIA 284 (373)
T ss_pred cchhhhccceeeecCCccch-hh-hcccc-cchhhhhhccCc-cchhhhcccccceeeeecHHHHHhhcCCchhhHHHHh
Confidence 111 12456666655111 00 00000 012233333321 13344678888888887662 22 2 67789999
Q ss_pred HcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH---HhhhCCH
Q 008154 478 RYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG---MEKDYTW 554 (576)
Q Consensus 478 a~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a---~~~~fs~ 554 (576)
+||.+-++....+..-.+.+ |..-+.+ .|.+++.+.++.++. .+..+++++..+ +...|+.
T Consensus 285 gc~~~liT~~~~~~e~~f~p----------gk~~iv~--~d~kdl~~~~~yll~----h~~erkeiae~~ye~V~~~ht~ 348 (373)
T COG4641 285 GCGGFLITDYWKDLEKFFKP----------GKDIIVY--QDSKDLKEKLKYLLN----HPDERKEIAECAYERVLARHTY 348 (373)
T ss_pred hcCCccccccHHHHHHhcCC----------chheEEe--cCHHHHHHHHHHHhc----CcchHHHHHHhhHHHHHHhccH
Confidence 99999998888777777776 5554443 488999999988876 555566666555 4556888
Q ss_pred HHHHHHHHHHHHHh
Q 008154 555 ENAAIQYEQVFEWA 568 (576)
Q Consensus 555 ~~~~~~y~~~y~~~ 568 (576)
+.-+..+.+....+
T Consensus 349 ~~r~~~~~~~i~sI 362 (373)
T COG4641 349 EERIFKLLNEIASI 362 (373)
T ss_pred HHHHHHHHHHHHHH
Confidence 88887777776653
No 139
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=96.64 E-value=0.49 Score=47.23 Aligned_cols=137 Identities=12% Similarity=0.122 Sum_probs=74.8
Q ss_pred CCCEEEEecccccccCHHHH---HHHHHhhhc-CCcEEEEEeCCChhhHHHHHHHHHHh--cCceEEEccCChhHHHHHH
Q 008154 381 DCPLIGFIGRLDYQKGIDLI---RLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATY--KDKYRGWVGFNVPISHRIT 454 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~l---l~a~~~L~~-~~~~lii~G~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ll 454 (576)
+..+++.+|.= .-|.+++ ++|...+.. +..-++|.|.-.|. ...+.+.... +.++. ...|+.+. ..++
T Consensus 219 ~~~Ilvs~GGG--~dG~eLi~~~l~A~~~l~~l~~~~~ivtGP~MP~--~~r~~l~~~A~~~p~i~-I~~f~~~~-~~ll 292 (400)
T COG4671 219 GFDILVSVGGG--ADGAELIETALAAAQLLAGLNHKWLIVTGPFMPE--AQRQKLLASAPKRPHIS-IFEFRNDF-ESLL 292 (400)
T ss_pred cceEEEecCCC--hhhHHHHHHHHHHhhhCCCCCcceEEEeCCCCCH--HHHHHHHHhcccCCCeE-EEEhhhhH-HHHH
Confidence 45677777743 3344444 444444333 22347778876542 2233333322 23443 34465554 4799
Q ss_pred hcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCcc--ccccccccccccccCCCCCcceeEeCCC-CHHHHHHHHHHHHH
Q 008154 455 AGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG--GLRDTVENFNPFAREGSGEGTGWSFLPL-SEESMLTALRFAIR 531 (576)
Q Consensus 455 ~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~g--g~~e~i~~~~~~~~~~~~~~~G~~~~~~-d~~~la~~i~~~l~ 531 (576)
++|+..|.=+=| +|.+|-+++|+|.+....+ +-.+++.-... .+.|-..++-+.+ +++.++++|..++.
T Consensus 293 ~gA~~vVSm~GY----NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl----~~LGL~dvL~pe~lt~~~La~al~~~l~ 364 (400)
T COG4671 293 AGARLVVSMGGY----NTVCEILSFGKPALIVPRAAPREEQLIRAQRL----EELGLVDVLLPENLTPQNLADALKAALA 364 (400)
T ss_pred Hhhheeeecccc----hhhhHHHhCCCceEEeccCCCcHHHHHHHHHH----HhcCcceeeCcccCChHHHHHHHHhccc
Confidence 999999854322 5789999999999986543 32233322111 1123334443222 47778888877765
No 140
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=96.44 E-value=0.22 Score=55.43 Aligned_cols=274 Identities=18% Similarity=0.183 Sum_probs=151.8
Q ss_pred CccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChh-hhhhcCCChhhhcc-cccccccccccccC
Q 008154 204 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAA-TYKNLGLPSEWYGA-LEWVFPTWARTHAL 281 (576)
Q Consensus 204 ~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 281 (576)
.-|++-+|+.|..++|..++... .++.+-|..|++ ||.. .++.+......+.. +...+.++-. .
T Consensus 140 ~~d~vwihdyhlmllp~~lr~~~------~~~~ig~flhsp-----fpssEi~r~lp~r~eIl~gll~~~~i~f~t---~ 205 (732)
T KOG1050|consen 140 EGDIVWIHDYHLMLLPQMLRERF------NSAKIGFFLHSP-----FPSSEIYRCLPVRKEILRGLLYDDLLGFHT---D 205 (732)
T ss_pred CCCcEEEEcchhhccchhhhccc------ccceEEEeccCC-----CChHHHHHhcccHHHHHHhhhccCcccccc---c
Confidence 45899999999888888877655 467777888987 3322 22333322222211 1111111111 1
Q ss_pred CcCccchhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcc
Q 008154 282 DTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLS 361 (576)
Q Consensus 282 ~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~ 361 (576)
+ ..+.-+..|..+.+.+-. +.....++ ........+..+|-|+|...+....... +
T Consensus 206 d------~arhFls~c~R~l~~~~~------s~~~~~~v--~~rgr~~~v~~~pigid~~r~v~~~~~~----~------ 261 (732)
T KOG1050|consen 206 D------YARHFLSTCSRLLGLEVA------SKFPTAGV--SGRGRDVSVKALPIGIDVQRFVKLLELP----Y------ 261 (732)
T ss_pred c------HHHHHHHHHHHHHHhhhh------ccCCcceE--EeccceeeeeecccccchHHhhccccch----h------
Confidence 1 111111222222111110 00000000 0012334577888899987776443210 0
Q ss_pred cchHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc------CCcEEEEEeCCC----hhhHHHHHHH
Q 008154 362 GKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA------DDIQFVMLGSGD----PQFESWMRDT 431 (576)
Q Consensus 362 ~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~------~~~~lii~G~g~----~~~~~~~~~~ 431 (576)
-......++... .+..+|+-+-|+...||...=+.|+.++.. ..+.++.+..+. +.+++.+..+
T Consensus 262 -~~~~~~ei~~~~-----~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~~~k~~v 335 (732)
T KOG1050|consen 262 -VGSKGMEIKEPF-----KGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVEELKFCV 335 (732)
T ss_pred -HHHHHHHHhhhc-----cCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchHHHHHHHHh
Confidence 000011222221 256778888899999999888888888765 256666655432 2233333333
Q ss_pred HH-------Hhc----CceE-EEccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcC----CceEEeCcccccccc
Q 008154 432 EA-------TYK----DKYR-GWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYG----TIPVVHATGGLRDTV 495 (576)
Q Consensus 432 ~~-------~~~----~~~~-~~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G----~pvIat~~gg~~e~i 495 (576)
.. .+. ..+. ....++....-+++.-+|+++..+..++..++.+|..+|. .+.|.+..-|-.+..
T Consensus 336 ~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl 415 (732)
T KOG1050|consen 336 SVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTL 415 (732)
T ss_pred HhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcccCCceEEeeeccccccc
Confidence 22 111 1121 2334456666688999999999999999999999998884 455666555555554
Q ss_pred ccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHh
Q 008154 496 ENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTY 533 (576)
Q Consensus 496 ~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~ 533 (576)
.+ ....+.|-|.++++.+|..++...
T Consensus 416 ~d------------~aivvnpw~~~~~~~~i~~al~~s 441 (732)
T KOG1050|consen 416 ED------------AAIVVNPWDGDEFAILISKALTMS 441 (732)
T ss_pred cc------------cCEEECCcchHHHHHHHHHHhhcC
Confidence 32 455667778999999999998754
No 141
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=95.77 E-value=0.68 Score=46.37 Aligned_cols=116 Identities=11% Similarity=0.119 Sum_probs=75.9
Q ss_pred CCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEE-EeCC--ChhhHHHHHHHHH-Hhc-CceEEEccC-ChhHHHHHH
Q 008154 381 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVM-LGSG--DPQFESWMRDTEA-TYK-DKYRGWVGF-NVPISHRIT 454 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii-~G~g--~~~~~~~~~~~~~-~~~-~~~~~~~~~-~~~~~~~ll 454 (576)
++++|+.-.+=++.-++..+++++.+....++++++ .|-| +..+.+.+..... .+. .++..+..+ +-++-..++
T Consensus 184 ~~ltILvGNSgd~sNnHieaL~~L~~~~~~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~lL 263 (360)
T PF07429_consen 184 GKLTILVGNSGDPSNNHIEALEALKQQFGDDVKIIVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEFMPFDEYLALL 263 (360)
T ss_pred CceEEEEcCCCCCCccHHHHHHHHHHhcCCCeEEEEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhhCCHHHHHHHH
Confidence 455665444556778888888888876556788777 3444 2333333333333 344 355544444 344455799
Q ss_pred hcCCEEEeCCC-CCCCcHHHHHHHHcCCceEEeCcccccccccc
Q 008154 455 AGCDILLMPSR-FEPCGLNQLYAMRYGTIPVVHATGGLRDTVEN 497 (576)
Q Consensus 455 ~~~Dv~v~ps~-~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~ 497 (576)
+.||+.+++.. .++.|+.++ .+.+|+||+.+...-+-..+.+
T Consensus 264 ~~cDl~if~~~RQQgiGnI~l-Ll~~G~~v~L~~~np~~~~l~~ 306 (360)
T PF07429_consen 264 SRCDLGIFNHNRQQGIGNICL-LLQLGKKVFLSRDNPFWQDLKE 306 (360)
T ss_pred HhCCEEEEeechhhhHhHHHH-HHHcCCeEEEecCChHHHHHHh
Confidence 99999999886 689998776 7999999999876555555554
No 142
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=95.68 E-value=0.33 Score=50.97 Aligned_cols=155 Identities=15% Similarity=0.141 Sum_probs=91.0
Q ss_pred CCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEE
Q 008154 381 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDIL 460 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~ 460 (576)
..+++.+.|..... .+++-.+++.+.+-++++++...+. .. . ....+.++. ..++-+.. .++..||++
T Consensus 237 ~~~vyvslGt~~~~--~~l~~~~~~a~~~l~~~vi~~~~~~-~~-~-----~~~~p~n~~-v~~~~p~~--~~l~~ad~v 304 (406)
T COG1819 237 RPIVYVSLGTVGNA--VELLAIVLEALADLDVRVIVSLGGA-RD-T-----LVNVPDNVI-VADYVPQL--ELLPRADAV 304 (406)
T ss_pred CCeEEEEcCCcccH--HHHHHHHHHHHhcCCcEEEEecccc-cc-c-----cccCCCceE-EecCCCHH--HHhhhcCEE
Confidence 34556666766544 4444444444544588888877441 11 1 113344543 34443332 489999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEeCcc----ccccccccccccccCCCCCcceeEeC--CCCHHHHHHHHHHHHHHhh
Q 008154 461 LMPSRFEPCGLNQLYAMRYGTIPVVHATG----GLRDTVENFNPFAREGSGEGTGWSFL--PLSEESMLTALRFAIRTYR 534 (576)
Q Consensus 461 v~ps~~E~~g~s~lEAma~G~pvIat~~g----g~~e~i~~~~~~~~~~~~~~~G~~~~--~~d~~~la~~i~~~l~~~~ 534 (576)
|... =-.|.+||+.+|+|+|+-..+ .+.+.+.+ -+.|.... .-+.+.++++|.+++.
T Consensus 305 I~hG----G~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~----------~G~G~~l~~~~l~~~~l~~av~~vL~--- 367 (406)
T COG1819 305 IHHG----GAGTTSEALYAGVPLVVIPDGADQPLNAERVEE----------LGAGIALPFEELTEERLRAAVNEVLA--- 367 (406)
T ss_pred EecC----CcchHHHHHHcCCCEEEecCCcchhHHHHHHHH----------cCCceecCcccCCHHHHHHHHHHHhc---
Confidence 9764 345789999999999996554 23334444 46777766 4578999999999986
Q ss_pred hCHHHHHHHHH--HHHhhhCCHHHHHHHHHHHH
Q 008154 535 EHKSSWEGLMR--RGMEKDYTWENAAIQYEQVF 565 (576)
Q Consensus 535 ~~~~~~~~~~~--~a~~~~fs~~~~~~~y~~~y 565 (576)
|+.......+ +.+.+.-..+++++...+..
T Consensus 368 -~~~~~~~~~~~~~~~~~~~g~~~~a~~le~~~ 399 (406)
T COG1819 368 -DDSYRRAAERLAEEFKEEDGPAKAADLLEEFA 399 (406)
T ss_pred -CHHHHHHHHHHHHHhhhcccHHHHHHHHHHHH
Confidence 4332222222 22344445444555554444
No 143
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=95.53 E-value=0.65 Score=47.48 Aligned_cols=92 Identities=11% Similarity=0.027 Sum_probs=58.2
Q ss_pred CCEEEEeccc-c-cccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCE
Q 008154 382 CPLIGFIGRL-D-YQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDI 459 (576)
Q Consensus 382 ~~~i~~~Gr~-~-~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv 459 (576)
..+.++.|.= . -.+-+..+++++.+|.+...++++.|..+ .+...+... ... .+. +.+ ....+++.||+
T Consensus 168 ~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a~~--~~~i~~~~~-~~~-~~~-~~~----~~~~~m~~aDl 238 (347)
T PRK14089 168 GTIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSFFK--GKDLKEIYG-DIS-EFE-ISY----DTHKALLEAEF 238 (347)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCCCc--HHHHHHHHh-cCC-CcE-Eec----cHHHHHHhhhH
Confidence 3455566643 2 24556778899999977556777776643 222222222 111 222 222 23468999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEeC
Q 008154 460 LLMPSRFEPCGLNQLYAMRYGTIPVVHA 487 (576)
Q Consensus 460 ~v~ps~~E~~g~s~lEAma~G~pvIat~ 487 (576)
.+.. +|++-+|++.+|+|.|..-
T Consensus 239 al~~-----SGT~TLE~al~g~P~Vv~Y 261 (347)
T PRK14089 239 AFIC-----SGTATLEAALIGTPFVLAY 261 (347)
T ss_pred HHhc-----CcHHHHHHHHhCCCEEEEE
Confidence 9865 5999999999999999854
No 144
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=95.08 E-value=2.1 Score=45.21 Aligned_cols=132 Identities=10% Similarity=0.111 Sum_probs=76.1
Q ss_pred HHHHHHHHhhhcCCcEEEEEeCC------ChhhHHHHHHHHHHhcC--ceE-EEccCChhHHHHHHhcCCEEEeCCCCCC
Q 008154 398 DLIRLAAPEILADDIQFVMLGSG------DPQFESWMRDTEATYKD--KYR-GWVGFNVPISHRITAGCDILLMPSRFEP 468 (576)
Q Consensus 398 ~~ll~a~~~L~~~~~~lii~G~g------~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~ll~~~Dv~v~ps~~E~ 468 (576)
..+.++++.|.+++.+++++-.- .+++....+.+.+.... ++. ....++..++..++++||++|-.-.+
T Consensus 260 ~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~~~~~~~~vi~~~~~~~e~~~iIs~~dl~ig~RlH-- 337 (426)
T PRK10017 260 KAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHVSDPARYHVVMDELNDLEMGKILGACELTVGTRLH-- 337 (426)
T ss_pred HHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHHHHhcccccceeEecCCCChHHHHHHHhhCCEEEEecch--
Confidence 44556667776666666665431 12233434455444332 222 23335555666899999999977654
Q ss_pred CcHHHHHHHHcCCceEEeC-ccccccccccccccccCCCCCcceeEeCC--CCHHHHHHHHHHHHHHhhhCHHHHHHHHH
Q 008154 469 CGLNQLYAMRYGTIPVVHA-TGGLRDTVENFNPFAREGSGEGTGWSFLP--LSEESMLTALRFAIRTYREHKSSWEGLMR 545 (576)
Q Consensus 469 ~g~s~lEAma~G~pvIat~-~gg~~e~i~~~~~~~~~~~~~~~G~~~~~--~d~~~la~~i~~~l~~~~~~~~~~~~~~~ 545 (576)
+.+=|++.|+|+|+-. ..-...++.+. |...++++. -+.+++.+.+.+++. |++.+++..+
T Consensus 338 ---a~I~a~~~gvP~i~i~Y~~K~~~~~~~l---------g~~~~~~~~~~l~~~~Li~~v~~~~~----~r~~~~~~l~ 401 (426)
T PRK10017 338 ---SAIISMNFGTPAIAINYEHKSAGIMQQL---------GLPEMAIDIRHLLDGSLQAMVADTLG----QLPALNARLA 401 (426)
T ss_pred ---HHHHHHHcCCCEEEeeehHHHHHHHHHc---------CCccEEechhhCCHHHHHHHHHHHHh----CHHHHHHHHH
Confidence 6778999999999954 33333333331 223343433 256777777777765 6655554444
Q ss_pred HH
Q 008154 546 RG 547 (576)
Q Consensus 546 ~a 547 (576)
++
T Consensus 402 ~~ 403 (426)
T PRK10017 402 EA 403 (426)
T ss_pred HH
Confidence 44
No 145
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=95.00 E-value=0.58 Score=50.67 Aligned_cols=122 Identities=8% Similarity=-0.054 Sum_probs=72.8
Q ss_pred CCEEEEeccccc-----ccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHH--
Q 008154 382 CPLIGFIGRLDY-----QKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRIT-- 454 (576)
Q Consensus 382 ~~~i~~~Gr~~~-----~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll-- 454 (576)
..+++..|.... .+-...+++|++++ +.++++...++. .+ ...+.++. ..++-+. ..++
T Consensus 297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l---~~~viw~~~~~~-~~-------~~~p~Nv~-i~~w~Pq--~~lL~h 362 (507)
T PHA03392 297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKL---PYNVLWKYDGEV-EA-------INLPANVL-TQKWFPQ--RAVLKH 362 (507)
T ss_pred cEEEEECCCCCcCCCCCHHHHHHHHHHHHhC---CCeEEEEECCCc-Cc-------ccCCCceE-EecCCCH--HHHhcC
Confidence 466677787643 23356666777665 567777655431 11 12233443 3333221 2477
Q ss_pred hcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccc----cccccccccccccCCCCCcceeEeCCC--CHHHHHHHHHH
Q 008154 455 AGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG----LRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRF 528 (576)
Q Consensus 455 ~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg----~~e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~ 528 (576)
..++++|.- +-..+..||+.+|+|.|+....+ +...+.. -+.|...+.. +.+++.++|.+
T Consensus 363 p~v~~fItH----GG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~----------~G~G~~l~~~~~t~~~l~~ai~~ 428 (507)
T PHA03392 363 KNVKAFVTQ----GGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVE----------LGIGRALDTVTVSAAQLVLAIVD 428 (507)
T ss_pred CCCCEEEec----CCcccHHHHHHcCCCEEECCCCccHHHHHHHHHH----------cCcEEEeccCCcCHHHHHHHHHH
Confidence 468999843 44568899999999999965432 2233322 3567666543 56778888887
Q ss_pred HHH
Q 008154 529 AIR 531 (576)
Q Consensus 529 ~l~ 531 (576)
++.
T Consensus 429 vl~ 431 (507)
T PHA03392 429 VIE 431 (507)
T ss_pred HhC
Confidence 775
No 146
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=94.96 E-value=0.72 Score=47.80 Aligned_cols=192 Identities=12% Similarity=0.055 Sum_probs=88.9
Q ss_pred HHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCC-CCCCCCccccccCCcCCcccchHhHHHHH
Q 008154 293 AIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITE-WNPSSDEHIASHYSIDDLSGKVQCKIALQ 371 (576)
Q Consensus 293 a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 371 (576)
..+..|.+++.|+...+.+. ..+..... .++..|..-.. +.... ....+.++
T Consensus 131 ~~~~~d~~~~~s~~~~~~~~---------~~f~~~~~--~i~~~G~PR~D~l~~~~----------------~~~~~~i~ 183 (369)
T PF04464_consen 131 NYRNYDYFIVSSEFEKEIFK---------KAFGYPED--KILVTGYPRNDYLFNKS----------------KENRNRIK 183 (369)
T ss_dssp HHTT-SEEEESSHHHHHHHH---------HHTT--GG--GEEES--GGGHHHHHST----------------T-HHHHHH
T ss_pred hccCCcEEEECCHHHHHHHH---------HHhccCcc--eEEEeCCCeEhHHhccC----------------HHHHHHHH
Confidence 44678999999988776543 23343343 34445653211 10010 11145677
Q ss_pred HHcCCCCCCCCCEEEEecccccccCH--------HHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEc
Q 008154 372 KELGLPIRPDCPLIGFIGRLDYQKGI--------DLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWV 443 (576)
Q Consensus 372 ~~~~i~~~~~~~~i~~~Gr~~~~Kg~--------~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~ 443 (576)
+.++++ .++.+|+|+=.+...... .+-++.+..+.+.++.+++ ..||......... .....++....
T Consensus 184 ~~~~~~--~~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~~~~~~~~li~--k~Hp~~~~~~~~~-~~~~~~i~~~~ 258 (369)
T PF04464_consen 184 KKLGID--KDKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLNFLLKNNYVLII--KPHPNMKKKFKDF-KEDNSNIIFVS 258 (369)
T ss_dssp HHTT----SS-EEEEEE----GGG--GGSS----TT-HHHHHHHHTTTEEEEE----SHHHHTT-----TT-TTTEEE-T
T ss_pred HHhccC--CCCcEEEEeeccccccccccccccccccCHHHHHHHhCCCcEEEE--EeCchhhhchhhh-hccCCcEEECC
Confidence 778877 566799998655432222 1223333334445666555 4455433322221 22334554443
Q ss_pred cCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeC--cccc---ccccccccccccCCCCCcceeEeCCCC
Q 008154 444 GFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA--TGGL---RDTVENFNPFAREGSGEGTGWSFLPLS 518 (576)
Q Consensus 444 ~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~--~gg~---~e~i~~~~~~~~~~~~~~~G~~~~~~d 518 (576)
.. .....++..||++|- -++-++.|++.+++|+|--. .... ...+.++ +....|-.+ .+
T Consensus 259 ~~--~~~~~ll~~aDiLIT-----DySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~-------~~~~pg~~~--~~ 322 (369)
T PF04464_consen 259 DN--EDIYDLLAAADILIT-----DYSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDY-------EEDLPGPIV--YN 322 (369)
T ss_dssp T---S-HHHHHHT-SEEEE-----SS-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-T-------TTSSSS-EE--SS
T ss_pred CC--CCHHHHHHhcCEEEE-----echhHHHHHHHhCCCEEEEeccHHHHhhccCCCCch-------HhhCCCcee--CC
Confidence 32 235679999999983 34558999999999999642 2111 1111110 112334444 37
Q ss_pred HHHHHHHHHHHHHH
Q 008154 519 EESMLTALRFAIRT 532 (576)
Q Consensus 519 ~~~la~~i~~~l~~ 532 (576)
.+++.++|.+.+..
T Consensus 323 ~~eL~~~i~~~~~~ 336 (369)
T PF04464_consen 323 FEELIEAIENIIEN 336 (369)
T ss_dssp HHHHHHHHTTHHHH
T ss_pred HHHHHHHHHhhhhC
Confidence 89999999988764
No 147
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=94.28 E-value=0.43 Score=46.89 Aligned_cols=42 Identities=19% Similarity=0.370 Sum_probs=35.0
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
|+|++++...+|+ ..||++.-+.+|.+.+-+.-..|..|++.
T Consensus 1 ~~V~ll~EGtYPy-v~GGVSsW~~~LI~glpe~~F~v~~i~a~ 42 (268)
T PF11997_consen 1 MDVCLLTEGTYPY-VRGGVSSWVHQLIRGLPEHEFHVYAIGAN 42 (268)
T ss_pred CeEEEEecCcCCC-CCCchhHHHHHHHhcCCCceEEEEEEeCC
Confidence 7899999999996 59999999999999987765566666654
No 148
>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins. These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process
Probab=93.50 E-value=0.27 Score=38.55 Aligned_cols=35 Identities=14% Similarity=0.109 Sum_probs=24.8
Q ss_pred CccEEEeCCCccchHHHH-HHhhccCCCCCCCCcEEEEeecC
Q 008154 204 EKCIFLVNDWHAGLVPVL-LASKYRPHGVYKDARSILVIHNL 244 (576)
Q Consensus 204 ~pDVvH~~~~~~~~~~~~-l~~~~~~~~~~~~~~~v~t~H~~ 244 (576)
+.||||.|...+.+.-.. +..+. .+.++|||-|+.
T Consensus 50 ~I~IVHgH~a~S~l~hE~i~hA~~------mGlktVfTDHSL 85 (90)
T PF08288_consen 50 RIDIVHGHQAFSTLCHEAILHART------MGLKTVFTDHSL 85 (90)
T ss_pred CeeEEEeehhhhHHHHHHHHHHHh------CCCcEEeecccc
Confidence 679999998666555332 22222 789999999976
No 149
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=93.02 E-value=5.7 Score=40.01 Aligned_cols=117 Identities=13% Similarity=-0.006 Sum_probs=68.1
Q ss_pred HHHHHHcCCCCCCCCCEEEEecccccc-----cCHHHHHHHHHhhhc-CCcEEEEEeCCChhhHHHHHHHHHHh--cCce
Q 008154 368 IALQKELGLPIRPDCPLIGFIGRLDYQ-----KGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATY--KDKY 439 (576)
Q Consensus 368 ~~~~~~~~i~~~~~~~~i~~~Gr~~~~-----Kg~~~ll~a~~~L~~-~~~~lii~G~g~~~~~~~~~~~~~~~--~~~~ 439 (576)
..|...++-. +...+.+.+|.=.+. .-...+++.+..+.+ .+..+.|..+-- .-++..+.+.+.. ...+
T Consensus 135 ~~~~~~~~~l--~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~~~~~vttSRR-Tp~~~~~~L~~~~~~~~~~ 211 (311)
T PF06258_consen 135 AAWAPRLAAL--PRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYGGSLLVTTSRR-TPPEAEAALRELLKDNPGV 211 (311)
T ss_pred HhhhhhhccC--CCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCCCeEEEEcCCC-CcHHHHHHHHHhhcCCCce
Confidence 4444444422 345555566642221 223356666666655 467888888752 1234444444433 2344
Q ss_pred EEEccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccc
Q 008154 440 RGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG 490 (576)
Q Consensus 440 ~~~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg 490 (576)
..+.+-..+-...+|+.||.++.+.- +-.=+-||++.|+||..-...+
T Consensus 212 ~~~~~~~~nPy~~~La~ad~i~VT~D---SvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 212 YIWDGTGENPYLGFLAAADAIVVTED---SVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred EEecCCCCCcHHHHHHhCCEEEEcCc---cHHHHHHHHHcCCCEEEecCCC
Confidence 34443333334479999999999864 2223689999999999987665
No 150
>PLN02448 UDP-glycosyltransferase family protein
Probab=92.54 E-value=4.2 Score=43.49 Aligned_cols=128 Identities=11% Similarity=0.060 Sum_probs=67.9
Q ss_pred CCCEEEEeccccc--ccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCC
Q 008154 381 DCPLIGFIGRLDY--QKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCD 458 (576)
Q Consensus 381 ~~~~i~~~Gr~~~--~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~D 458 (576)
...+++..|.... .+-+..++++++. .+..++++..++. .. ..+....+.. ..++-+.. .++...+
T Consensus 274 ~~vvyvsfGs~~~~~~~~~~~~~~~l~~---~~~~~lw~~~~~~--~~----~~~~~~~~~~-v~~w~pQ~--~iL~h~~ 341 (459)
T PLN02448 274 GSVLYVSLGSFLSVSSAQMDEIAAGLRD---SGVRFLWVARGEA--SR----LKEICGDMGL-VVPWCDQL--KVLCHSS 341 (459)
T ss_pred CceEEEeecccccCCHHHHHHHHHHHHh---CCCCEEEEEcCch--hh----HhHhccCCEE-EeccCCHH--HHhccCc
Confidence 4466666777643 2224444444444 4778887765431 11 1111222332 23332222 4788777
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEeCcc----ccccccccccccccCCCCCcceeEeC-------CCCHHHHHHHHH
Q 008154 459 ILLMPSRFEPCGLNQLYAMRYGTIPVVHATG----GLRDTVENFNPFAREGSGEGTGWSFL-------PLSEESMLTALR 527 (576)
Q Consensus 459 v~v~ps~~E~~g~s~lEAma~G~pvIat~~g----g~~e~i~~~~~~~~~~~~~~~G~~~~-------~~d~~~la~~i~ 527 (576)
+..+-+. +-..|.+||+++|+|.|+-... .+...+.+ .-+.|+.+. .-+.++++++++
T Consensus 342 v~~fvtH--gG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~---------~~g~G~~~~~~~~~~~~~~~~~l~~av~ 410 (459)
T PLN02448 342 VGGFWTH--CGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVE---------DWKIGWRVKREVGEETLVGREEIAELVK 410 (459)
T ss_pred cceEEec--CchhHHHHHHHcCCCEEeccccccchhhHHHHHH---------HhCceEEEecccccCCcCcHHHHHHHHH
Confidence 7333221 2335889999999999996543 22222322 002455542 125788888888
Q ss_pred HHHH
Q 008154 528 FAIR 531 (576)
Q Consensus 528 ~~l~ 531 (576)
+++.
T Consensus 411 ~vl~ 414 (459)
T PLN02448 411 RFMD 414 (459)
T ss_pred HHhc
Confidence 8885
No 151
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=92.41 E-value=2.7 Score=42.77 Aligned_cols=111 Identities=17% Similarity=0.123 Sum_probs=68.7
Q ss_pred HHHHHHcCCCCCCCCCEEEEecc-cccccCHH--HHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEcc
Q 008154 368 IALQKELGLPIRPDCPLIGFIGR-LDYQKGID--LIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVG 444 (576)
Q Consensus 368 ~~~~~~~~i~~~~~~~~i~~~Gr-~~~~Kg~~--~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~ 444 (576)
..+...++++. .+..+++..|. ..+.|.+. .+.+.+++|.+++.++++.|..+ ..+..+.+.+.....++-+.+
T Consensus 162 ~~~~~~~~~~~-~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~G~~~--e~~~~~~i~~~~~~~~~~l~g 238 (334)
T TIGR02195 162 AAALAKFGLDT-ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLFGSAK--DHPAGNEIEALLPGELRNLAG 238 (334)
T ss_pred HHHHHHcCCCC-CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEEEChh--hHHHHHHHHHhCCcccccCCC
Confidence 33455556541 13344455554 45677754 77777777766678899998753 344455555544333332333
Q ss_pred -CChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEe
Q 008154 445 -FNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH 486 (576)
Q Consensus 445 -~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat 486 (576)
.+-.++..+++.||++|-+- .|..=+ |.|.|+|+|+-
T Consensus 239 ~~sL~el~ali~~a~l~I~~D----SGp~Hl-AaA~~~P~i~l 276 (334)
T TIGR02195 239 ETSLDEAVDLIALAKAVVTND----SGLMHV-AAALNRPLVAL 276 (334)
T ss_pred CCCHHHHHHHHHhCCEEEeeC----CHHHHH-HHHcCCCEEEE
Confidence 25556678999999999763 233333 78999999984
No 152
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=91.60 E-value=7.2 Score=41.89 Aligned_cols=41 Identities=20% Similarity=0.156 Sum_probs=32.4
Q ss_pred CCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecC
Q 008154 63 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY 109 (576)
Q Consensus 63 ~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~ 109 (576)
..+++|+++. +| .-|--+=+.++|+.|+.+|+.|+++++.+
T Consensus 7 ~~~~HVvl~P---fp---aqGHi~P~l~LAk~La~~G~~VTfv~T~~ 47 (477)
T PLN02863 7 PAGTHVLVFP---FP---AQGHMIPLLDLTHRLALRGLTITVLVTPK 47 (477)
T ss_pred CCCCEEEEec---Cc---ccchHHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 3457888884 34 45677778999999999999999998765
No 153
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=91.15 E-value=2.1 Score=41.37 Aligned_cols=112 Identities=13% Similarity=0.009 Sum_probs=62.8
Q ss_pred CCCEEEEecccccccCHHH--HHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEcc-CChhHHHHHHhcC
Q 008154 381 DCPLIGFIGRLDYQKGIDL--IRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVG-FNVPISHRITAGC 457 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~--ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ll~~~ 457 (576)
+..+++..|.-.+.|++.. ..+.+++|.+...++++.|...+..++..+.+.+..+..++.+.+ .+-.+...+++.|
T Consensus 105 ~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~ali~~a 184 (247)
T PF01075_consen 105 KPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQEKEIADQIAAGLQNPVINLAGKTSLRELAALISRA 184 (247)
T ss_dssp SSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHHHHHHHHHHHTTHTTTTEEETTTS-HHHHHHHHHTS
T ss_pred CCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHHHHHHHHHHHHhcccceEeecCCCCHHHHHHHHhcC
Confidence 4456666666567887544 888888887767889999987533344455555544433444444 3555666899999
Q ss_pred CEEEeCCCCCCCcHHHHHHHHcCCceEEeCcccccccccc
Q 008154 458 DILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVEN 497 (576)
Q Consensus 458 Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~ 497 (576)
|++|-+- .|..=+ |.|.|+|+|+--....+....+
T Consensus 185 ~~~I~~D----tg~~Hl-A~a~~~p~v~lfg~t~~~~~~P 219 (247)
T PF01075_consen 185 DLVIGND----TGPMHL-AAALGTPTVALFGPTNPERWGP 219 (247)
T ss_dssp SEEEEES----SHHHHH-HHHTT--EEEEESSS-HHHHS-
T ss_pred CEEEecC----ChHHHH-HHHHhCCEEEEecCCCHHHhCC
Confidence 9999774 233333 7899999999533333333333
No 154
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=91.00 E-value=18 Score=35.94 Aligned_cols=126 Identities=16% Similarity=0.110 Sum_probs=72.4
Q ss_pred HHHHHHcCCCCCCCCCEEEE-e---c--ccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEE
Q 008154 368 IALQKELGLPIRPDCPLIGF-I---G--RLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRG 441 (576)
Q Consensus 368 ~~~~~~~~i~~~~~~~~i~~-~---G--r~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~ 441 (576)
....+++|+. ++..+|++ . + -+...++.+.+.++++.|.+.. .+++-. ++.++++-+.+...+.
T Consensus 170 ~evlkeLgl~--~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k~g--iV~ipr-----~~~~~eife~~~n~i~- 239 (346)
T COG1817 170 PEVLKELGLE--EGETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKKYG--IVLIPR-----EKEQAEIFEGYRNIII- 239 (346)
T ss_pred HHHHHHcCCC--CCCceEEEeeccccceeeccccchhhHHHHHHHHHhCc--EEEecC-----chhHHHHHhhhccccC-
Confidence 3566788987 33344443 1 1 1223566777788888886655 333322 2223344444432221
Q ss_pred EccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCcc---ccccccccccccccCCCCCcceeEeCCCC
Q 008154 442 WVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG---GLRDTVENFNPFAREGSGEGTGWSFLPLS 518 (576)
Q Consensus 442 ~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~g---g~~e~i~~~~~~~~~~~~~~~G~~~~~~d 518 (576)
.....+. -+++--|++++ -+.|+-.-||++.|+|.|++.-| ...++.. +.|.++...|
T Consensus 240 pk~~vD~--l~Llyya~lvi-----g~ggTMarEaAlLGtpaIs~~pGkll~vdk~li------------e~G~~~~s~~ 300 (346)
T COG1817 240 PKKAVDT--LSLLYYATLVI-----GAGGTMAREAALLGTPAISCYPGKLLAVDKYLI------------EKGLLYHSTD 300 (346)
T ss_pred CcccccH--HHHHhhhheee-----cCCchHHHHHHHhCCceEEecCCccccccHHHH------------hcCceeecCC
Confidence 1111111 14666777776 35677789999999999998854 3444444 4788887777
Q ss_pred HHHH
Q 008154 519 EESM 522 (576)
Q Consensus 519 ~~~l 522 (576)
+.+.
T Consensus 301 ~~~~ 304 (346)
T COG1817 301 EIAI 304 (346)
T ss_pred HHHH
Confidence 7643
No 155
>PLN03004 UDP-glycosyltransferase
Probab=90.73 E-value=4.9 Score=42.79 Aligned_cols=135 Identities=12% Similarity=-0.006 Sum_probs=71.1
Q ss_pred CCCEEEEecccc--cccCHHHHHHHHHhhhcCCcEEEEEeCCChh-------hHH-HHHHHHHHhcCceEEEccCChhHH
Q 008154 381 DCPLIGFIGRLD--YQKGIDLIRLAAPEILADDIQFVMLGSGDPQ-------FES-WMRDTEATYKDKYRGWVGFNVPIS 450 (576)
Q Consensus 381 ~~~~i~~~Gr~~--~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~-------~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 450 (576)
+..+++..|... +.+-+..|..+++.. +..|+++=..+.. .+. .-+...++..++-+...++-+..
T Consensus 270 ~sVvyvsfGS~~~~~~~q~~ela~gL~~s---~~~FlW~~r~~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~- 345 (451)
T PLN03004 270 KSVVFLCFGSLGLFSKEQVIEIAVGLEKS---GQRFLWVVRNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQV- 345 (451)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHC---CCCEEEEEcCCccccccccchhhhCChHHHHhccCCcEEEEeeCCHH-
Confidence 456666678764 345555666666554 4456665443210 111 00111222222222222332222
Q ss_pred HHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCc----cccccccccccccccCCCCCcceeEeCC-----CCHHH
Q 008154 451 HRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT----GGLRDTVENFNPFAREGSGEGTGWSFLP-----LSEES 521 (576)
Q Consensus 451 ~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~----gg~~e~i~~~~~~~~~~~~~~~G~~~~~-----~d~~~ 521 (576)
.+++.+++..+-+. +=-+|.+||+++|+|+|+... ......+.+ .-+.|+.++. -+.++
T Consensus 346 -~iL~H~~v~~FvTH--~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~---------~~g~g~~l~~~~~~~~~~e~ 413 (451)
T PLN03004 346 -PVLNHKAVGGFVTH--CGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVD---------EIKIAISMNESETGFVSSTE 413 (451)
T ss_pred -HHhCCCccceEecc--CcchHHHHHHHcCCCEEeccccccchhhHHHHHH---------HhCceEEecCCcCCccCHHH
Confidence 48999998444432 223589999999999999543 333333322 0245655542 26788
Q ss_pred HHHHHHHHHH
Q 008154 522 MLTALRFAIR 531 (576)
Q Consensus 522 la~~i~~~l~ 531 (576)
+++++++++.
T Consensus 414 l~~av~~vm~ 423 (451)
T PLN03004 414 VEKRVQEIIG 423 (451)
T ss_pred HHHHHHHHhc
Confidence 8888888874
No 156
>PLN02670 transferase, transferring glycosyl groups
Probab=90.54 E-value=5.1 Score=42.89 Aligned_cols=167 Identities=10% Similarity=0.071 Sum_probs=83.9
Q ss_pred CCCEEEEecccc--cccCHHHHHHHHHhhhcCCcEEEEEeCCChhh-----HHHHHHHHHHhcCceEEEccCChhHHHHH
Q 008154 381 DCPLIGFIGRLD--YQKGIDLIRLAAPEILADDIQFVMLGSGDPQF-----ESWMRDTEATYKDKYRGWVGFNVPISHRI 453 (576)
Q Consensus 381 ~~~~i~~~Gr~~--~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 453 (576)
+..+++..|.+. +.+-+..|..+++.+ +..|+++=..+... +..-+...++..++=+...++-+.. .+
T Consensus 278 ~sVvyvsfGS~~~l~~~q~~ela~gl~~s---~~~FlWv~r~~~~~~~~~~~~lp~~f~~~~~~rG~vv~~W~PQ~--~I 352 (472)
T PLN02670 278 NSVVYVALGTEASLRREEVTELALGLEKS---ETPFFWVLRNEPGTTQNALEMLPDGFEERVKGRGMIHVGWVPQV--KI 352 (472)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHC---CCCEEEEEcCCcccccchhhcCChHHHHhccCCCeEEeCcCCHH--HH
Confidence 456666668765 344455555666554 34566654321100 0011111112222212223343322 47
Q ss_pred HhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCc----cccccccccccccccCCCCCcceeEeCC------CCHHHHH
Q 008154 454 TAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT----GGLRDTVENFNPFAREGSGEGTGWSFLP------LSEESML 523 (576)
Q Consensus 454 l~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~----gg~~e~i~~~~~~~~~~~~~~~G~~~~~------~d~~~la 523 (576)
++...+..+-+. +--.+.+||+++|+|+|+-.. ......+.. -+.|+.+.. -+.+++.
T Consensus 353 L~H~~v~~FvtH--cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~----------~g~Gv~l~~~~~~~~~~~e~i~ 420 (472)
T PLN02670 353 LSHESVGGFLTH--CGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHG----------KKLGLEVPRDERDGSFTSDSVA 420 (472)
T ss_pred hcCcccceeeec--CCcchHHHHHHcCCCEEeCcchhccHHHHHHHHH----------cCeeEEeeccccCCcCcHHHHH
Confidence 877777444332 223689999999999999543 222223322 356666642 2477888
Q ss_pred HHHHHHHHHhhhCH--HHHHHHHHH---HHhhhCCHHHHHHHHHHHHHHh
Q 008154 524 TALRFAIRTYREHK--SSWEGLMRR---GMEKDYTWENAAIQYEQVFEWA 568 (576)
Q Consensus 524 ~~i~~~l~~~~~~~--~~~~~~~~~---a~~~~fs~~~~~~~y~~~y~~~ 568 (576)
+++.+++. ++ +.+.+.+++ .++.+=...++++++.+.+...
T Consensus 421 ~av~~vm~----~~~g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~ 466 (472)
T PLN02670 421 ESVRLAMV----DDAGEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLREN 466 (472)
T ss_pred HHHHHHhc----CcchHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHh
Confidence 88888874 32 112211111 1334556666777776655543
No 157
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=89.50 E-value=4.6 Score=36.14 Aligned_cols=35 Identities=14% Similarity=0.129 Sum_probs=22.4
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
|||+++++. -||.=+...+...+.. -|+++++|+.
T Consensus 1 M~ILlle~y------~ggSHk~~~~~L~~~~--~~~~~lltLP 35 (168)
T PF12038_consen 1 MRILLLEPY------YGGSHKQWADGLAAHS--EHEWTLLTLP 35 (168)
T ss_pred CeEEEEccc------cccCHHHHHHHHHHhc--cCCEEEEEcC
Confidence 899999753 3555544444333333 6899999864
No 158
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=89.06 E-value=9.2 Score=38.57 Aligned_cols=100 Identities=16% Similarity=0.064 Sum_probs=62.3
Q ss_pred CCCEEEEecccccccCH--HHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCC
Q 008154 381 DCPLIGFIGRLDYQKGI--DLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCD 458 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~--~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~D 458 (576)
+..+++..|.=.+.|+. +.+.+.++.|.+++.++++.|.++ ...+..+.+.+..+.. ......+-.+...+++.||
T Consensus 179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~-~e~~~~~~i~~~~~~~-~l~g~~sL~el~ali~~a~ 256 (319)
T TIGR02193 179 APYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGND-AEKQRAERIAEALPGA-VVLPKMSLAEVAALLAGAD 256 (319)
T ss_pred CCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCH-HHHHHHHHHHhhCCCC-eecCCCCHHHHHHHHHcCC
Confidence 44556666644567776 577777777766678888886553 2334445554443322 1122235566678999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEeC
Q 008154 459 ILLMPSRFEPCGLNQLYAMRYGTIPVVHA 487 (576)
Q Consensus 459 v~v~ps~~E~~g~s~lEAma~G~pvIat~ 487 (576)
++|-+- .|..=+ |.|.|+|+|+--
T Consensus 257 l~I~~D----Sgp~Hl-Aaa~g~P~i~lf 280 (319)
T TIGR02193 257 AVVGVD----TGLTHL-AAALDKPTVTLY 280 (319)
T ss_pred EEEeCC----ChHHHH-HHHcCCCEEEEE
Confidence 999764 232223 678999999854
No 159
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=88.74 E-value=0.14 Score=46.40 Aligned_cols=44 Identities=18% Similarity=0.191 Sum_probs=29.5
Q ss_pred EccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccc
Q 008154 442 WVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG 490 (576)
Q Consensus 442 ~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg 490 (576)
..+|.++ +..+++.||++|.- +-+.|+.|++++|+|.|.....+
T Consensus 59 ~~~~~~~-m~~~m~~aDlvIs~----aG~~Ti~E~l~~g~P~I~ip~~~ 102 (167)
T PF04101_consen 59 VFGFVDN-MAELMAAADLVISH----AGAGTIAEALALGKPAIVIPLPG 102 (167)
T ss_dssp EECSSSS-HHHHHHHHSEEEEC----S-CHHHHHHHHCT--EEEE--TT
T ss_pred EEechhh-HHHHHHHcCEEEeC----CCccHHHHHHHcCCCeeccCCCC
Confidence 4455544 45799999998853 34579999999999999866555
No 160
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=88.20 E-value=9.7 Score=40.87 Aligned_cols=105 Identities=9% Similarity=-0.044 Sum_probs=58.9
Q ss_pred HHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCcc----ccccccc-cccccccCCCCCcceeEeCC----CCHHHH
Q 008154 452 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG----GLRDTVE-NFNPFAREGSGEGTGWSFLP----LSEESM 522 (576)
Q Consensus 452 ~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~g----g~~e~i~-~~~~~~~~~~~~~~G~~~~~----~d~~~l 522 (576)
.++....+..+-+. +=..|.+||+.+|+|+|+.... .+...+. . -+.|..++. -+.+++
T Consensus 350 ~iL~h~~vg~FitH--~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~----------~g~gv~~~~~~~~~~~~~l 417 (481)
T PLN02992 350 EILAHQAVGGFLTH--CGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDE----------LGIAVRSDDPKEVISRSKI 417 (481)
T ss_pred HHhCCcccCeeEec--CchhHHHHHHHcCCCEEecCccchhHHHHHHHHHH----------hCeeEEecCCCCcccHHHH
Confidence 47887776333321 2236889999999999995432 2333332 2 245555533 267888
Q ss_pred HHHHHHHHHH-----hhhCHHHHHHHHHHHHh------hhCCHHHHHHHHHHHHHHh
Q 008154 523 LTALRFAIRT-----YREHKSSWEGLMRRGME------KDYTWENAAIQYEQVFEWA 568 (576)
Q Consensus 523 a~~i~~~l~~-----~~~~~~~~~~~~~~a~~------~~fs~~~~~~~y~~~y~~~ 568 (576)
++++.+++.+ +..+.+.+.+.++++++ ..-+.++++++....++++
T Consensus 418 ~~av~~vm~~~~g~~~r~~a~~~~~~a~~Av~~~~GGSS~~~l~~~v~~~~~~~~~~ 474 (481)
T PLN02992 418 EALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDGGGVAHESLCRVTKECQRFLERV 474 (481)
T ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHH
Confidence 8888888742 11123344444444442 1234455666666655543
No 161
>PLN02173 UDP-glucosyl transferase family protein
Probab=87.94 E-value=11 Score=40.05 Aligned_cols=40 Identities=13% Similarity=0.169 Sum_probs=31.5
Q ss_pred CCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecC
Q 008154 64 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY 109 (576)
Q Consensus 64 ~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~ 109 (576)
++.+|++|. +| .-|--+-+.++|+.|+.+|+.|+++++..
T Consensus 4 ~~~hvv~~P---~p---aqGHi~P~l~lAk~La~~G~~vT~v~t~~ 43 (449)
T PLN02173 4 MRGHVLAVP---FP---SQGHITPIRQFCKRLHSKGFKTTHTLTTF 43 (449)
T ss_pred CCcEEEEec---Cc---ccccHHHHHHHHHHHHcCCCEEEEEECCc
Confidence 345788884 34 35677778999999999999999998664
No 162
>PLN02562 UDP-glycosyltransferase
Probab=87.41 E-value=16 Score=38.88 Aligned_cols=131 Identities=7% Similarity=-0.056 Sum_probs=69.3
Q ss_pred CCCEEEEecccc---cccCHHHHHHHHHhhhcCCcEEEEE-eCCCh-hhHHHHHHHHHHhcCceEEEccCChhHHHHHHh
Q 008154 381 DCPLIGFIGRLD---YQKGIDLIRLAAPEILADDIQFVML-GSGDP-QFESWMRDTEATYKDKYRGWVGFNVPISHRITA 455 (576)
Q Consensus 381 ~~~~i~~~Gr~~---~~Kg~~~ll~a~~~L~~~~~~lii~-G~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 455 (576)
+..+++..|... +.+-+..++.+++.+ +.+++++ ..+.. ...+ ...++...+.. ..++-+. ..+++
T Consensus 273 ~svvyvsfGS~~~~~~~~~~~~l~~~l~~~---g~~fiW~~~~~~~~~l~~---~~~~~~~~~~~-v~~w~PQ--~~iL~ 343 (448)
T PLN02562 273 NSVIYISFGSWVSPIGESNVRTLALALEAS---GRPFIWVLNPVWREGLPP---GYVERVSKQGK-VVSWAPQ--LEVLK 343 (448)
T ss_pred CceEEEEecccccCCCHHHHHHHHHHHHHC---CCCEEEEEcCCchhhCCH---HHHHHhccCEE-EEecCCH--HHHhC
Confidence 345667777754 334455555555554 4466653 22210 1111 11122223332 2233222 14788
Q ss_pred cCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCc----cccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHH
Q 008154 456 GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT----GGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 456 ~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~----gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
..++..+-+. +--.|.+||+.+|+|+|+... ..+...+.+ .-+.|+-+...+.+++++++++++.
T Consensus 344 h~~v~~fvtH--~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~---------~~g~g~~~~~~~~~~l~~~v~~~l~ 412 (448)
T PLN02562 344 HQAVGCYLTH--CGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVD---------VWKIGVRISGFGQKEVEEGLRKVME 412 (448)
T ss_pred CCccceEEec--CcchhHHHHHHcCCCEEeCCcccchHHHHHHHHH---------HhCceeEeCCCCHHHHHHHHHHHhC
Confidence 8776443332 223688999999999998543 333333332 0145555544577888888888874
No 163
>PLN03007 UDP-glucosyltransferase family protein
Probab=87.19 E-value=19 Score=38.83 Aligned_cols=40 Identities=13% Similarity=0.166 Sum_probs=31.7
Q ss_pred CCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecC
Q 008154 64 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY 109 (576)
Q Consensus 64 ~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~ 109 (576)
++.+|+++. +| .-|--.=+.++|+.|+++|++|+++++..
T Consensus 4 ~~~hVvlvp---~p---a~GHi~P~L~LAk~L~~rG~~VT~vtt~~ 43 (482)
T PLN03007 4 EKLHILFFP---FM---AHGHMIPTLDMAKLFSSRGAKSTILTTPL 43 (482)
T ss_pred CCcEEEEEC---CC---ccccHHHHHHHHHHHHhCCCEEEEEECCC
Confidence 456899996 34 35666778999999999999999998653
No 164
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=86.54 E-value=11 Score=38.70 Aligned_cols=102 Identities=9% Similarity=0.005 Sum_probs=63.6
Q ss_pred CCCEEEEecccccccCH--HHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhc-CceEEEccC-ChhHHHHHHhc
Q 008154 381 DCPLIGFIGRLDYQKGI--DLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYK-DKYRGWVGF-NVPISHRITAG 456 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~--~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~ll~~ 456 (576)
+..+++..|.-.+.|++ +.+.+.++.|.+.+.+++++|...+...+..+.+.+... ..++.+.+. +-.++..+++.
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~ 262 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGALIDH 262 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHh
Confidence 45666676765577775 467777777766678888887643222233344444321 223333332 55666689999
Q ss_pred CCEEEeCCCCCCCcHHHHHHHHcCCceEEeC
Q 008154 457 CDILLMPSRFEPCGLNQLYAMRYGTIPVVHA 487 (576)
Q Consensus 457 ~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~ 487 (576)
||++|-+- .|..=+ |.|.|+|+|+--
T Consensus 263 a~l~v~nD----SGp~Hl-AaA~g~P~v~lf 288 (352)
T PRK10422 263 AQLFIGVD----SAPAHI-AAAVNTPLICLF 288 (352)
T ss_pred CCEEEecC----CHHHHH-HHHcCCCEEEEE
Confidence 99999764 233333 779999999843
No 165
>PLN02555 limonoid glucosyltransferase
Probab=86.00 E-value=32 Score=37.02 Aligned_cols=38 Identities=24% Similarity=0.258 Sum_probs=30.7
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecC
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY 109 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~ 109 (576)
.+|+++. +| .-|--+=+.++|+.|+.+|..|+++++..
T Consensus 8 ~HVv~~P---fp---aqGHi~Pml~lA~~La~~G~~vT~v~T~~ 45 (480)
T PLN02555 8 VHVMLVS---FP---GQGHVNPLLRLGKLLASKGLLVTFVTTES 45 (480)
T ss_pred CEEEEEC---Cc---ccccHHHHHHHHHHHHhCCCeEEEEeccc
Confidence 4688874 34 46677778999999999999999998764
No 166
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=85.90 E-value=6.4 Score=38.84 Aligned_cols=105 Identities=16% Similarity=0.103 Sum_probs=65.1
Q ss_pred CEEEEecccccccC--HHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHh-cCceEEEcc-CChhHHHHHHhcCC
Q 008154 383 PLIGFIGRLDYQKG--IDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATY-KDKYRGWVG-FNVPISHRITAGCD 458 (576)
Q Consensus 383 ~~i~~~Gr~~~~Kg--~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~ll~~~D 458 (576)
.+++..|.-.+.|. .+.+.+.++.|.+++++++++|..+ ..+..+.+.+.. ..++..+.+ .+..+...+++.||
T Consensus 123 ~i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~--e~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li~~~~ 200 (279)
T cd03789 123 VVVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPA--ERELAEEIAAALGGPRVVNLAGKTSLRELAALLARAD 200 (279)
T ss_pred EEEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechh--hHHHHHHHHHhcCCCccccCcCCCCHHHHHHHHHhCC
Confidence 34444554445555 4678888888877788999998754 344444454433 223332333 24455668999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccc
Q 008154 459 ILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDT 494 (576)
Q Consensus 459 v~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~ 494 (576)
++|-+- .|..-+ |.+.|+|+|+--.+..++.
T Consensus 201 l~I~~D----sg~~Hl-A~a~~~p~i~l~g~~~~~~ 231 (279)
T cd03789 201 LVVTND----SGPMHL-AAALGTPTVALFGPTDPAR 231 (279)
T ss_pred EEEeeC----CHHHHH-HHHcCCCEEEEECCCCccc
Confidence 999774 354445 4699999999644433433
No 167
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=85.64 E-value=2.6 Score=34.30 Aligned_cols=81 Identities=12% Similarity=0.132 Sum_probs=52.9
Q ss_pred EEEEeCCChhhHHHHHHHHHHhcCceEEE---ccCChhH--HHHHHhcCCEEEeCCCC---CCCcHHHHHHHHcCCceEE
Q 008154 414 FVMLGSGDPQFESWMRDTEATYKDKYRGW---VGFNVPI--SHRITAGCDILLMPSRF---EPCGLNQLYAMRYGTIPVV 485 (576)
Q Consensus 414 lii~G~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--~~~ll~~~Dv~v~ps~~---E~~g~s~lEAma~G~pvIa 485 (576)
++|+|.-+. ....++...+.....+..+ .+..... .+..+..+|++|++.-+ ...-.+--+|-..|+|++-
T Consensus 2 vliVGG~~~-~~~~~~~~~~~~G~~~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~ 80 (97)
T PF10087_consen 2 VLIVGGRED-RERRYKRILEKYGGKLIHHGRDGGDEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIY 80 (97)
T ss_pred EEEEcCCcc-cHHHHHHHHHHcCCEEEEEecCCCCccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcCCcEEE
Confidence 567777432 3444555555566676666 3343333 56788999999988763 3444555677888999999
Q ss_pred eCcccccccc
Q 008154 486 HATGGLRDTV 495 (576)
Q Consensus 486 t~~gg~~e~i 495 (576)
++..++..+.
T Consensus 81 ~~~~~~~~l~ 90 (97)
T PF10087_consen 81 SRSRGVSSLE 90 (97)
T ss_pred ECCCCHHHHH
Confidence 9876665443
No 168
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=85.30 E-value=7.8 Score=41.90 Aligned_cols=132 Identities=16% Similarity=0.085 Sum_probs=69.9
Q ss_pred CCCEEEEeccccc---ccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcC
Q 008154 381 DCPLIGFIGRLDY---QKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGC 457 (576)
Q Consensus 381 ~~~~i~~~Gr~~~---~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 457 (576)
+..+++..|.+.. .+-...++++++++ +.++++.-++.+. . .+..++ ....+-+. .++++..
T Consensus 276 ~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~---~~~~iW~~~~~~~--~-------~l~~n~-~~~~W~PQ--~~lL~hp 340 (500)
T PF00201_consen 276 KGVVYVSFGSIVSSMPEEKLKEIAEAFENL---PQRFIWKYEGEPP--E-------NLPKNV-LIVKWLPQ--NDLLAHP 340 (500)
T ss_dssp TEEEEEE-TSSSTT-HHHHHHHHHHHHHCS---TTEEEEEETCSHG--C-------HHHTTE-EEESS--H--HHHHTST
T ss_pred CCEEEEecCcccchhHHHHHHHHHHHHhhC---CCccccccccccc--c-------cccceE-EEeccccc--hhhhhcc
Confidence 4566777788753 12234466666665 4478876665311 1 112243 23444332 2578765
Q ss_pred CEEEeCCCCCCCcHHHHHHHHcCCceEEeCc----cccccccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHHHH
Q 008154 458 DILLMPSRFEPCGLNQLYAMRYGTIPVVHAT----GGLRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAIR 531 (576)
Q Consensus 458 Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~----gg~~e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~l~ 531 (576)
.+-++=+. +=-.+.+||+.+|+|+|+... ......+.+ .+.|...+.. +.+++.++|.+++.
T Consensus 341 ~v~~fitH--gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~----------~G~g~~l~~~~~~~~~l~~ai~~vl~ 408 (500)
T PF00201_consen 341 RVKLFITH--GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEE----------KGVGVVLDKNDLTEEELRAAIREVLE 408 (500)
T ss_dssp TEEEEEES----HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHH----------TTSEEEEGGGC-SHHHHHHHHHHHHH
T ss_pred cceeeeec--cccchhhhhhhccCCccCCCCcccCCccceEEEE----------EeeEEEEEecCCcHHHHHHHHHHHHh
Confidence 55433321 334688999999999999543 223333333 3456666544 46788888888875
Q ss_pred HhhhCHHHHHHH
Q 008154 532 TYREHKSSWEGL 543 (576)
Q Consensus 532 ~~~~~~~~~~~~ 543 (576)
|++-.++.
T Consensus 409 ----~~~y~~~a 416 (500)
T PF00201_consen 409 ----NPSYKENA 416 (500)
T ss_dssp ----SHHHHHHH
T ss_pred ----hhHHHHHH
Confidence 65443333
No 169
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=85.29 E-value=29 Score=35.55 Aligned_cols=169 Identities=10% Similarity=0.121 Sum_probs=106.9
Q ss_pred EEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCC--ChhhHHHHHHHHH----HhcCceEEEccCCh-----hHHHH
Q 008154 384 LIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSG--DPQFESWMRDTEA----TYKDKYRGWVGFNV-----PISHR 452 (576)
Q Consensus 384 ~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g--~~~~~~~~~~~~~----~~~~~~~~~~~~~~-----~~~~~ 452 (576)
.|=|.|.+..-+-+....+..++.++.++.+||+-.. +.....+.+++.+ -.+.++++..+... +++..
T Consensus 156 ~iP~ygsyte~dpv~ia~egv~~fKke~fdvIIvDTSGRh~qe~sLfeEM~~v~~ai~Pd~vi~VmDasiGQaae~Qa~a 235 (483)
T KOG0780|consen 156 RVPFYGSYTEADPVKIASEGVDRFKKENFDVIIVDTSGRHKQEASLFEEMKQVSKAIKPDEIIFVMDASIGQAAEAQARA 235 (483)
T ss_pred CCeeEecccccchHHHHHHHHHHHHhcCCcEEEEeCCCchhhhHHHHHHHHHHHhhcCCCeEEEEEeccccHhHHHHHHH
Confidence 4556678888899999999999999999999998753 2222333333322 33556666555432 33334
Q ss_pred HHhcCCE--EEeCCCC----CCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHH
Q 008154 453 ITAGCDI--LLMPSRF----EPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTAL 526 (576)
Q Consensus 453 ll~~~Dv--~v~ps~~----E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i 526 (576)
+=..+|+ +|.+-.. -+..+|.. .|.+.||+-...|..-|-++.|++.. -.+-+..-+|.+.+.+.+
T Consensus 236 Fk~~vdvg~vIlTKlDGhakGGgAlSaV--aaTksPIiFIGtGEhmdDlE~F~pk~------FvsrlLGmGDi~glvek~ 307 (483)
T KOG0780|consen 236 FKETVDVGAVILTKLDGHAKGGGALSAV--AATKSPIIFIGTGEHMDDLEPFDPKP------FVSRLLGMGDIEGLVEKV 307 (483)
T ss_pred HHHhhccceEEEEecccCCCCCceeeeh--hhhCCCEEEEecCccccccCCCChHH------HHHHHhccccHHHHHHHH
Confidence 4455555 4555442 24556666 46799999888776555555544322 334455677999988888
Q ss_pred HHHHHHhhhCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHH
Q 008154 527 RFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 527 ~~~l~~~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y~ 566 (576)
.++..+ ++++.. ++-.+-+|+...|.+++.++..
T Consensus 308 ~ev~~~--d~~el~----~kl~~gkFtlrd~y~Qfq~imk 341 (483)
T KOG0780|consen 308 QEVGKD--DAKELV----EKLKQGKFTLRDFYDQFQNIMK 341 (483)
T ss_pred HHHhhh--hHHHHH----HHHHhCCccHHHHHHHHHHHHh
Confidence 887621 223333 3323568999999988877654
No 170
>PLN02167 UDP-glycosyltransferase family protein
Probab=85.15 E-value=23 Score=38.14 Aligned_cols=34 Identities=21% Similarity=0.299 Sum_probs=23.8
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEE
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 106 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~ 106 (576)
+|++|. +| .-|--+=+.+||+.|+.+|..++.++
T Consensus 5 hVv~~P---fp---aqGHi~P~l~LAk~La~~G~~~t~vt 38 (475)
T PLN02167 5 ELIFVP---FP---STGHILVTIEFAKRLINLDRRIHTIT 38 (475)
T ss_pred EEEEeC---Ch---hhhhHHHHHHHHHHHHhCCCCeEEEE
Confidence 677773 23 35677778999999999985443343
No 171
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=84.95 E-value=9.8 Score=37.98 Aligned_cols=99 Identities=13% Similarity=-0.033 Sum_probs=62.1
Q ss_pred CEEEEecccc---cccCHHHHHHHHHhhhcC-CcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCC
Q 008154 383 PLIGFIGRLD---YQKGIDLIRLAAPEILAD-DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCD 458 (576)
Q Consensus 383 ~~i~~~Gr~~---~~Kg~~~ll~a~~~L~~~-~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~D 458 (576)
..|++.-|-. ..+..+.+.++++.+.++ +.+++++....+.+....+.+..........+...+.++...++++||
T Consensus 173 ~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~~~g~~v~~i~~~~~~D~~~~~~l~~~~~~~~~i~~~~~~~e~~~~i~~~~ 252 (298)
T TIGR03609 173 PVIVVSLRPWPLLDVSRLLRLLRALDRLQRDTGAFVLFLPFQQPQDLPLARALRDQLLGPAEVLSPLDPEELLGLFASAR 252 (298)
T ss_pred CeEEEEECCCCcCCHHHHHHHHHHHHHHHHhhCCeEEEEeCCcchhHHHHHHHHHhcCCCcEEEecCCHHHHHHHHhhCC
Confidence 4555544431 223456777888877654 777766664433345556666655432212224446666668999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEe
Q 008154 459 ILLMPSRFEPCGLNQLYAMRYGTIPVVH 486 (576)
Q Consensus 459 v~v~ps~~E~~g~s~lEAma~G~pvIat 486 (576)
++|-...+ +.+=|+++|+|+|+-
T Consensus 253 ~vI~~RlH-----~~I~A~~~gvP~i~i 275 (298)
T TIGR03609 253 LVIGMRLH-----ALILAAAAGVPFVAL 275 (298)
T ss_pred EEEEechH-----HHHHHHHcCCCEEEe
Confidence 88877664 677899999999975
No 172
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=84.33 E-value=33 Score=34.56 Aligned_cols=99 Identities=9% Similarity=0.015 Sum_probs=59.0
Q ss_pred CCEEEEecccccccCH--HHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCE
Q 008154 382 CPLIGFIGRLDYQKGI--DLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDI 459 (576)
Q Consensus 382 ~~~i~~~Gr~~~~Kg~--~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv 459 (576)
..+++..|.-...|++ +.+.+.+++|.+.+.++++.|.++ ...+..+.+.+... .+......+-.+...+++.||+
T Consensus 179 ~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~-~e~~~~~~i~~~~~-~~~l~g~~sL~elaali~~a~l 256 (322)
T PRK10964 179 PYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAE-HEEQRAKRLAEGFP-YVEVLPKLSLEQVARVLAGAKA 256 (322)
T ss_pred CeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCH-HHHHHHHHHHccCC-cceecCCCCHHHHHHHHHhCCE
Confidence 3443344433356665 467788888866677887763342 23444455544332 2222222355666689999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEeC
Q 008154 460 LLMPSRFEPCGLNQLYAMRYGTIPVVHA 487 (576)
Q Consensus 460 ~v~ps~~E~~g~s~lEAma~G~pvIat~ 487 (576)
+|-+- .|. +-=|.|.|+|+|+-=
T Consensus 257 ~I~nD----SGp-~HlA~A~g~p~valf 279 (322)
T PRK10964 257 VVSVD----TGL-SHLTAALDRPNITLY 279 (322)
T ss_pred EEecC----CcH-HHHHHHhCCCEEEEE
Confidence 99764 232 233789999999943
No 173
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=84.31 E-value=33 Score=36.62 Aligned_cols=40 Identities=18% Similarity=0.338 Sum_probs=31.3
Q ss_pred CCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecC
Q 008154 64 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY 109 (576)
Q Consensus 64 ~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~ 109 (576)
...+|++|. +| .-|--+=+.++|+.|+.+|+.|+++++..
T Consensus 6 ~~~HVvlvP---fp---aqGHi~P~l~LAk~La~~G~~VT~v~T~~ 45 (451)
T PLN02410 6 ARRRVVLVP---VP---AQGHISPMMQLAKTLHLKGFSITIAQTKF 45 (451)
T ss_pred CCCEEEEEC---CC---ccccHHHHHHHHHHHHcCCCEEEEEeCcc
Confidence 346788884 24 34666778999999999999999998764
No 174
>PLN02554 UDP-glycosyltransferase family protein
Probab=84.06 E-value=31 Score=37.13 Aligned_cols=39 Identities=18% Similarity=0.166 Sum_probs=29.6
Q ss_pred CceEEEEeeccCCccccCcHHHHHhhHHHHHHhCC--CcEEEEEecC
Q 008154 65 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG--HRVMVVSPRY 109 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G--~~V~vi~~~~ 109 (576)
+++|+++- +| .-|--+=+.++|+.|+.+| ..|+++++..
T Consensus 2 ~~hvvl~P---~p---aqGHi~P~l~LAk~La~~G~~~~vT~v~t~~ 42 (481)
T PLN02554 2 KIELVFIP---SP---GIGHLRPTVELAKLLVDSDDRLSITVIIIPS 42 (481)
T ss_pred ceEEEEeC---Cc---chhhHHHHHHHHHHHHhCCCCEEEEEEeCCC
Confidence 46788873 24 4567777899999999998 7888987653
No 175
>PLN02207 UDP-glycosyltransferase
Probab=83.98 E-value=27 Score=37.34 Aligned_cols=37 Identities=16% Similarity=0.250 Sum_probs=28.9
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCC--CcEEEEEecC
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG--HRVMVVSPRY 109 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G--~~V~vi~~~~ 109 (576)
+|++|. +| .-|--+-+.++|+.|+.+| ..|++++...
T Consensus 5 hvv~~P---~p---~qGHi~P~l~lA~~La~~gg~~~vT~~~t~~ 43 (468)
T PLN02207 5 ELIFIP---TP---TVGHLVPFLEFARRLIEQDDRIRITILLMKL 43 (468)
T ss_pred EEEEeC---Cc---chhhHHHHHHHHHHHHhCCCCeEEEEEEcCC
Confidence 577763 34 3577788899999999998 8999998665
No 176
>PLN00164 glucosyltransferase; Provisional
Probab=83.63 E-value=28 Score=37.46 Aligned_cols=37 Identities=14% Similarity=-0.054 Sum_probs=28.5
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCC----CcEEEEEecC
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG----HRVMVVSPRY 109 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G----~~V~vi~~~~ 109 (576)
+|+++- +| .-|--+-+.++|+.|+.+| +.|++++...
T Consensus 5 HVVlvP---fp---aqGHi~P~l~LAk~La~~g~~~~~~vT~~~t~~ 45 (480)
T PLN00164 5 TVVLLP---VW---GSGHLMSMLEAGKRLLASSGGGALSLTVLVMPP 45 (480)
T ss_pred EEEEeC---Cc---chhHHHHHHHHHHHHHhCCCCCcEEEEEEEcCC
Confidence 677773 23 4577788899999999986 7899998654
No 177
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=83.38 E-value=21 Score=36.38 Aligned_cols=102 Identities=11% Similarity=0.031 Sum_probs=63.0
Q ss_pred CCCEEEEecccccccCH--HHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcC-ceEEEccC-ChhHHHHHHhc
Q 008154 381 DCPLIGFIGRLDYQKGI--DLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKD-KYRGWVGF-NVPISHRITAG 456 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~--~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~ll~~ 456 (576)
+..+++..|.-.+.|.. +...+.+++|.+++.+++++|...+...+..+.+.+.... +++.+.+. +..++..+++.
T Consensus 181 ~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~ 260 (344)
T TIGR02201 181 QNYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQLAALIDH 260 (344)
T ss_pred CCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHHHHHHHh
Confidence 34555566654466665 5666677677656788999986533233344555544322 23333333 55666789999
Q ss_pred CCEEEeCCCCCCCcHHHHHHHHcCCceEEeC
Q 008154 457 CDILLMPSRFEPCGLNQLYAMRYGTIPVVHA 487 (576)
Q Consensus 457 ~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~ 487 (576)
||++|-+- .|..=+ |.|.|+|+|+--
T Consensus 261 a~l~Vs~D----SGp~Hl-AaA~g~p~v~Lf 286 (344)
T TIGR02201 261 ARLFIGVD----SVPMHM-AAALGTPLVALF 286 (344)
T ss_pred CCEEEecC----CHHHHH-HHHcCCCEEEEE
Confidence 99999763 233323 789999999943
No 178
>PLN02764 glycosyltransferase family protein
Probab=83.30 E-value=37 Score=36.17 Aligned_cols=41 Identities=20% Similarity=0.247 Sum_probs=33.0
Q ss_pred CCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecC
Q 008154 63 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY 109 (576)
Q Consensus 63 ~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~ 109 (576)
..+++|++|. +| .-|--+-+.++|+.|+.+|+.|+++++..
T Consensus 3 ~~~~Hvvl~P---~p---aqGHi~P~l~LAk~La~~g~~vT~~tt~~ 43 (453)
T PLN02764 3 GLKFHVLMYP---WF---ATGHMTPFLFLANKLAEKGHTVTFLLPKK 43 (453)
T ss_pred CCCcEEEEEC---Cc---ccccHHHHHHHHHHHHhCCCEEEEEeCcc
Confidence 3567899884 24 45777888999999999999999998764
No 179
>PLN02210 UDP-glucosyl transferase
Probab=83.28 E-value=20 Score=38.29 Aligned_cols=133 Identities=9% Similarity=-0.014 Sum_probs=67.3
Q ss_pred CCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEE-eCCC-hhhHHHHHHHHHHh-cCceEEEccCChhHHHHHHhcC
Q 008154 381 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVML-GSGD-PQFESWMRDTEATY-KDKYRGWVGFNVPISHRITAGC 457 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~-G~g~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ll~~~ 457 (576)
...+++..|..... ..+.+-+.+.-|...+.+|+++ +... +... ..+.+.. ..+.. ..++-+.. .+++.+
T Consensus 269 ~svvyvsfGS~~~~-~~~~~~e~a~~l~~~~~~flw~~~~~~~~~~~---~~~~~~~~~~~g~-v~~w~PQ~--~iL~h~ 341 (456)
T PLN02210 269 SSVVYISFGSMLES-LENQVETIAKALKNRGVPFLWVIRPKEKAQNV---QVLQEMVKEGQGV-VLEWSPQE--KILSHM 341 (456)
T ss_pred CceEEEEecccccC-CHHHHHHHHHHHHhCCCCEEEEEeCCccccch---hhHHhhccCCCeE-EEecCCHH--HHhcCc
Confidence 44666667876532 3344444444454446666664 3221 1111 1122221 12221 22332322 478888
Q ss_pred CEEEeCCCCCCCcHHHHHHHHcCCceEEeCcc----ccccccccccccccCCCCCcceeEeCC------CCHHHHHHHHH
Q 008154 458 DILLMPSRFEPCGLNQLYAMRYGTIPVVHATG----GLRDTVENFNPFAREGSGEGTGWSFLP------LSEESMLTALR 527 (576)
Q Consensus 458 Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~g----g~~e~i~~~~~~~~~~~~~~~G~~~~~------~d~~~la~~i~ 527 (576)
++..+-+. -++ .|.+||+++|+|+|+-... .+...+.+ .-+.|..+.. -+.++++++++
T Consensus 342 ~vg~FitH-~G~-nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~---------~~g~G~~l~~~~~~~~~~~~~l~~av~ 410 (456)
T PLN02210 342 AISCFVTH-CGW-NSTIETVVAGVPVVAYPSWTDQPIDARLLVD---------VFGIGVRMRNDAVDGELKVEEVERCIE 410 (456)
T ss_pred CcCeEEee-CCc-ccHHHHHHcCCCEEecccccccHHHHHHHHH---------HhCeEEEEeccccCCcCCHHHHHHHHH
Confidence 74433332 122 4789999999999995432 22222222 0145555431 26788888888
Q ss_pred HHHH
Q 008154 528 FAIR 531 (576)
Q Consensus 528 ~~l~ 531 (576)
+++.
T Consensus 411 ~~m~ 414 (456)
T PLN02210 411 AVTE 414 (456)
T ss_pred HHhc
Confidence 8874
No 180
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=83.02 E-value=11 Score=38.46 Aligned_cols=99 Identities=16% Similarity=0.082 Sum_probs=67.2
Q ss_pred CCEEEEec-ccccccCH--HHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCC
Q 008154 382 CPLIGFIG-RLDYQKGI--DLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCD 458 (576)
Q Consensus 382 ~~~i~~~G-r~~~~Kg~--~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~D 458 (576)
..+++..| .....|+. +.+.+.++.|.++..++++.|.. ...+..+.+.......+.....-+-.++..++..||
T Consensus 176 ~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~--~e~e~~~~i~~~~~~~~~l~~k~sL~e~~~li~~a~ 253 (334)
T COG0859 176 PYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGP--DEEERAEEIAKGLPNAVILAGKTSLEELAALIAGAD 253 (334)
T ss_pred CeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecCh--HHHHHHHHHHHhcCCccccCCCCCHHHHHHHHhcCC
Confidence 45566667 66677775 46777777777777889999987 356666777766553322122224455668999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEeC
Q 008154 459 ILLMPSRFEPCGLNQLYAMRYGTIPVVHA 487 (576)
Q Consensus 459 v~v~ps~~E~~g~s~lEAma~G~pvIat~ 487 (576)
++|-+. .|..=+ |.|.|+|+|+--
T Consensus 254 l~I~~D----Sg~~Hl-AaA~~~P~I~iy 277 (334)
T COG0859 254 LVIGND----SGPMHL-AAALGTPTIALY 277 (334)
T ss_pred EEEccC----ChHHHH-HHHcCCCEEEEE
Confidence 999764 344444 789999999953
No 181
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=82.81 E-value=10 Score=37.31 Aligned_cols=102 Identities=10% Similarity=-0.068 Sum_probs=56.1
Q ss_pred CCCCEEEEecccccc-------cCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHH--HHHHHHHHh-cCceEEEccCCh
Q 008154 380 PDCPLIGFIGRLDYQ-------KGIDLIRLAAPEILA--DDIQFVMLGSGDPQFES--WMRDTEATY-KDKYRGWVGFNV 447 (576)
Q Consensus 380 ~~~~~i~~~Gr~~~~-------Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~--~~~~~~~~~-~~~~~~~~~~~~ 447 (576)
.++.+|++....... .....+++.+..+.+ ++.+++| +-||.... ....+.+.. ..+++.... +.
T Consensus 115 ~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvv--K~HP~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 191 (269)
T PF05159_consen 115 KNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVV--KPHPDERGGNKYSYLEELPNLPNVVIIDD-DV 191 (269)
T ss_pred CCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEE--EECchhhCCCChhHhhhhhcCCCeEEECC-CC
Confidence 355667777665543 234455555555544 3555554 44442110 011222221 223332221 22
Q ss_pred hHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccc
Q 008154 448 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG 490 (576)
Q Consensus 448 ~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg 490 (576)
....++..||.++-- .+++++||+.+|+||++-....
T Consensus 192 -~~~~Ll~~s~~Vvti-----nStvGlEAll~gkpVi~~G~~~ 228 (269)
T PF05159_consen 192 -NLYELLEQSDAVVTI-----NSTVGLEALLHGKPVIVFGRAF 228 (269)
T ss_pred -CHHHHHHhCCEEEEE-----CCHHHHHHHHcCCceEEecCcc
Confidence 234789999998754 3579999999999999965543
No 182
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=82.42 E-value=5.7 Score=38.69 Aligned_cols=90 Identities=16% Similarity=0.248 Sum_probs=58.8
Q ss_pred EEEEecccccccCHHHHHHHHHhhhcCCcEEE-EEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEe
Q 008154 384 LIGFIGRLDYQKGIDLIRLAAPEILADDIQFV-MLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLM 462 (576)
Q Consensus 384 ~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~li-i~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ 462 (576)
+++..|.-+ .|+ +.++.++.|.+.++.+- ++|.++|..+...+...+..+.+ .+. +.+.+..++..||..+.
T Consensus 161 ilI~lGGsD-pk~--lt~kvl~~L~~~~~nl~iV~gs~~p~l~~l~k~~~~~~~i~--~~~--~~~dma~LMke~d~aI~ 233 (318)
T COG3980 161 ILITLGGSD-PKN--LTLKVLAELEQKNVNLHIVVGSSNPTLKNLRKRAEKYPNIN--LYI--DTNDMAELMKEADLAIS 233 (318)
T ss_pred EEEEccCCC-hhh--hHHHHHHHhhccCeeEEEEecCCCcchhHHHHHHhhCCCee--eEe--cchhHHHHHHhcchhee
Confidence 445555323 343 45677777766554443 36777777777777666554433 344 23445689999999986
Q ss_pred CCCCCCCcHHHHHHHHcCCceEE
Q 008154 463 PSRFEPCGLNQLYAMRYGTIPVV 485 (576)
Q Consensus 463 ps~~E~~g~s~lEAma~G~pvIa 485 (576)
. -|.++.||+..|+|.++
T Consensus 234 A-----aGstlyEa~~lgvP~l~ 251 (318)
T COG3980 234 A-----AGSTLYEALLLGVPSLV 251 (318)
T ss_pred c-----cchHHHHHHHhcCCceE
Confidence 4 58899999999999444
No 183
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=82.32 E-value=24 Score=37.70 Aligned_cols=134 Identities=12% Similarity=0.010 Sum_probs=69.0
Q ss_pred CCCEEEEecccc--cccCHHHHHHHHHhhhcCCcEEEEEeCCC--------hhhHHH---HHHHHHHhcCceEEEccCCh
Q 008154 381 DCPLIGFIGRLD--YQKGIDLIRLAAPEILADDIQFVMLGSGD--------PQFESW---MRDTEATYKDKYRGWVGFNV 447 (576)
Q Consensus 381 ~~~~i~~~Gr~~--~~Kg~~~ll~a~~~L~~~~~~lii~G~g~--------~~~~~~---~~~~~~~~~~~~~~~~~~~~ 447 (576)
+..+++..|.+. +.+-+..+..+++.+ +..|+++=..+ ...... .+...++...+.. ..++-+
T Consensus 261 ~sVvyvsfGS~~~l~~~q~~ela~gL~~s---~~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~g~-v~~W~P 336 (455)
T PLN02152 261 SSVIYVSFGTMVELSKKQIEELARALIEG---KRPFLWVITDKLNREAKIEGEEETEIEKIAGFRHELEEVGM-IVSWCS 336 (455)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHc---CCCeEEEEecCcccccccccccccccccchhHHHhccCCeE-EEeeCC
Confidence 456666668765 455666677777666 33555532210 000000 1222222333322 223322
Q ss_pred hHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCcc----ccccccccccccccCCCCCcceeEeC-----CCC
Q 008154 448 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG----GLRDTVENFNPFAREGSGEGTGWSFL-----PLS 518 (576)
Q Consensus 448 ~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~g----g~~e~i~~~~~~~~~~~~~~~G~~~~-----~~d 518 (576)
.. .+++...+-++-+. +=..+.+||+.+|+|+|+-... .....+.+ .-+.|+-+. .-+
T Consensus 337 Q~--~iL~h~~vg~fvtH--~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~---------~~~~G~~~~~~~~~~~~ 403 (455)
T PLN02152 337 QI--EVLRHRAVGCFVTH--CGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEE---------IWKTGVRVRENSEGLVE 403 (455)
T ss_pred HH--HHhCCcccceEEee--CCcccHHHHHHcCCCEEeccccccchHHHHHHHH---------HhCceEEeecCcCCcCc
Confidence 22 57888887555443 2235889999999999985432 22222211 002344432 125
Q ss_pred HHHHHHHHHHHHH
Q 008154 519 EESMLTALRFAIR 531 (576)
Q Consensus 519 ~~~la~~i~~~l~ 531 (576)
.+++++++.+++.
T Consensus 404 ~e~l~~av~~vm~ 416 (455)
T PLN02152 404 RGEIRRCLEAVME 416 (455)
T ss_pred HHHHHHHHHHHHh
Confidence 7888888888885
No 184
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=80.61 E-value=20 Score=36.65 Aligned_cols=98 Identities=16% Similarity=0.115 Sum_probs=60.0
Q ss_pred CCEEEEecc-cccccCH--HHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcC----ceEEEccC-ChhHHHHH
Q 008154 382 CPLIGFIGR-LDYQKGI--DLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKD----KYRGWVGF-NVPISHRI 453 (576)
Q Consensus 382 ~~~i~~~Gr-~~~~Kg~--~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~l 453 (576)
..+++..|. ..+.|.+ +.+.+.+++|.+.+.++++.|..+ ..+..+.+.+.... +++.+.+- +-.++..+
T Consensus 181 ~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~Gg~~--e~~~~~~i~~~~~~~~~~~~~~l~g~~sL~el~al 258 (348)
T PRK10916 181 PIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFGSAK--DHEAGNEILAALNTEQQAWCRNLAGETQLEQAVIL 258 (348)
T ss_pred CEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEeCHH--hHHHHHHHHHhcccccccceeeccCCCCHHHHHHH
Confidence 344455554 3467775 456777777765678889988653 33444444433221 22333332 45566689
Q ss_pred HhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEe
Q 008154 454 TAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH 486 (576)
Q Consensus 454 l~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat 486 (576)
++.||++|-+- .|..=+ |.|.|+|+|+-
T Consensus 259 i~~a~l~I~nD----TGp~Hl-AaA~g~P~val 286 (348)
T PRK10916 259 IAACKAIVTND----SGLMHV-AAALNRPLVAL 286 (348)
T ss_pred HHhCCEEEecC----ChHHHH-HHHhCCCEEEE
Confidence 99999999663 233323 78999999984
No 185
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=79.96 E-value=47 Score=34.26 Aligned_cols=118 Identities=11% Similarity=0.084 Sum_probs=67.6
Q ss_pred HHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhc--CceEEEccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHH
Q 008154 400 IRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYK--DKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAM 477 (576)
Q Consensus 400 ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAm 477 (576)
+++-.+++......+...-.+..++....+.+..... .++....+...+.....+++||+.|-.-++ +.+=||
T Consensus 227 ~l~~~~~~~~~~~~i~~~~~~~s~d~~va~~ia~~~~~~~~i~~~~d~~~~~~~~~l~~~dl~Vg~R~H-----saI~al 301 (385)
T COG2327 227 ALDLVERQVKALWRITLIDYGASDDLAVADAIAQLVLDSAEILVSSDEYAEELGGILAACDLIVGMRLH-----SAIMAL 301 (385)
T ss_pred HHHHHHHhhhcceEEEeeeccccchhHHHHHHHhhcCCccceEeecchHHHHHHHHhccCceEEeehhH-----HHHHHH
Confidence 3333333333344444333332334555566665544 455443332223455688999999876654 567799
Q ss_pred HcCCceEEeC-ccccccccccccccccCCCCCcceeEe--CCCCHHHHHHHHHHHHH
Q 008154 478 RYGTIPVVHA-TGGLRDTVENFNPFAREGSGEGTGWSF--LPLSEESMLTALRFAIR 531 (576)
Q Consensus 478 a~G~pvIat~-~gg~~e~i~~~~~~~~~~~~~~~G~~~--~~~d~~~la~~i~~~l~ 531 (576)
+.|+|+|+-. .+-...+++++ |-.++.. .+.|.+.+.+...+.+.
T Consensus 302 ~~g~p~i~i~Y~~K~~~l~~~~---------gl~~~~~~i~~~~~~~l~~~~~e~~~ 349 (385)
T COG2327 302 AFGVPAIAIAYDPKVRGLMQDL---------GLPGFAIDIDPLDAEILSAVVLERLT 349 (385)
T ss_pred hcCCCeEEEeecHHHHHHHHHc---------CCCcccccCCCCchHHHHHHHHHHHh
Confidence 9999999965 34444555553 3444544 34567777777766665
No 186
>PLN02208 glycosyltransferase family protein
Probab=77.97 E-value=63 Score=34.39 Aligned_cols=39 Identities=23% Similarity=0.215 Sum_probs=31.5
Q ss_pred CCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 64 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 64 ~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
++.+|++|. +| .-|--.=+.++|+.|+.+|+.|+++++.
T Consensus 3 ~~~hvv~~P---~p---aqGHi~P~l~LAk~La~~G~~VT~vtt~ 41 (442)
T PLN02208 3 PKFHAFMFP---WF---AFGHMIPFLHLANKLAEKGHRVTFLLPK 41 (442)
T ss_pred CCCEEEEec---Cc---cccHHHHHHHHHHHHHhCCCEEEEEecc
Confidence 356788884 34 4677788899999999999999999854
No 187
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=76.76 E-value=3.5 Score=35.25 Aligned_cols=47 Identities=17% Similarity=0.206 Sum_probs=31.6
Q ss_pred HHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccc
Q 008154 450 SHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVE 496 (576)
Q Consensus 450 ~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~ 496 (576)
...++..+|++|--|.-+..--.+-.++.+|+|+|+.-+|+-.+.+.
T Consensus 61 l~~~~~~~DVvIDfT~p~~~~~~~~~~~~~g~~~ViGTTG~~~~~~~ 107 (124)
T PF01113_consen 61 LEELLEEADVVIDFTNPDAVYDNLEYALKHGVPLVIGTTGFSDEQID 107 (124)
T ss_dssp HHHHTTH-SEEEEES-HHHHHHHHHHHHHHT-EEEEE-SSSHHHHHH
T ss_pred HHHhcccCCEEEEcCChHHhHHHHHHHHhCCCCEEEECCCCCHHHHH
Confidence 44678889999988865555555666788999999988887655443
No 188
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=72.74 E-value=4.7 Score=37.58 Aligned_cols=40 Identities=28% Similarity=0.336 Sum_probs=28.9
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCC
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNG 112 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~ 112 (576)
|||+..+.... .+.-+..|+++|++.||+|.|++|...+.
T Consensus 1 M~ILlTNDDGi-------~a~Gi~aL~~~L~~~g~~V~VvAP~~~~S 40 (196)
T PF01975_consen 1 MRILLTNDDGI-------DAPGIRALAKALSALGHDVVVVAPDSEQS 40 (196)
T ss_dssp SEEEEE-SS-T-------TSHHHHHHHHHHTTTSSEEEEEEESSSTT
T ss_pred CeEEEEcCCCC-------CCHHHHHHHHHHHhcCCeEEEEeCCCCCc
Confidence 88999876532 12235678889988899999999987653
No 189
>PLN02534 UDP-glycosyltransferase
Probab=70.58 E-value=1.6e+02 Score=31.83 Aligned_cols=39 Identities=21% Similarity=0.148 Sum_probs=30.9
Q ss_pred CceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecC
Q 008154 65 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY 109 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~ 109 (576)
..+|+++. +| .-|--+-+.++|+.|+.+|+.|+++++..
T Consensus 8 ~~Hvv~vP---fp---aqGHi~P~l~LAk~La~~G~~vT~v~t~~ 46 (491)
T PLN02534 8 QLHFVLIP---LM---AQGHMIPMIDMARLLAERGVIVSLVTTPQ 46 (491)
T ss_pred CCEEEEEC---CC---CcchHHHHHHHHHHHHhCCCeEEEEECCC
Confidence 35788884 34 35677778999999999999999998764
No 190
>PLN00414 glycosyltransferase family protein
Probab=67.34 E-value=92 Score=33.19 Aligned_cols=37 Identities=24% Similarity=0.203 Sum_probs=29.9
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
.+|++|- +| .-|--.=+.++|+.|+.+|+.|+++++.
T Consensus 5 ~HVvlvP---fp---aqGHi~PmL~LAk~Las~G~~VT~vtt~ 41 (446)
T PLN00414 5 FHAFMYP---WF---GFGHMIPYLHLANKLAEKGHRVTFFLPK 41 (446)
T ss_pred CEEEEec---Cc---ccchHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 5788884 34 3577777899999999999999999865
No 191
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=66.09 E-value=1.4e+02 Score=29.21 Aligned_cols=106 Identities=10% Similarity=-0.031 Sum_probs=57.9
Q ss_pred CCCCEEEEecccccccC-----HHHHHHHHHhhhc-CCcEEEEEeCCChhhHHHHHHHHHHhc-CceEEEccCC--hhHH
Q 008154 380 PDCPLIGFIGRLDYQKG-----IDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATYK-DKYRGWVGFN--VPIS 450 (576)
Q Consensus 380 ~~~~~i~~~Gr~~~~Kg-----~~~ll~a~~~L~~-~~~~lii~G~g~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~ 450 (576)
+...+-+++|.-.+.-. ...+..++.+... ....+++--+-- .-+.....+...+. .-.+.+.+-| .+--
T Consensus 160 ~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSRR-Tp~~~~s~l~~~l~s~~~i~w~~~d~g~NPY 238 (329)
T COG3660 160 PRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSFLISFSRR-TPDTVKSILKNNLNSSPGIVWNNEDTGYNPY 238 (329)
T ss_pred CCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCceEEEEeecC-CcHHHHHHHHhccccCceeEeCCCCCCCCch
Confidence 46678888885443222 2334444433322 567777665542 12334444444332 2233343321 1112
Q ss_pred HHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCcc
Q 008154 451 HRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG 489 (576)
Q Consensus 451 ~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~g 489 (576)
..+++.||.+|.+.- +=.-+-||.+.|+||.+-...
T Consensus 239 ~~~La~Adyii~TaD---SinM~sEAasTgkPv~~~~~~ 274 (329)
T COG3660 239 IDMLAAADYIISTAD---SINMCSEAASTGKPVFILEPP 274 (329)
T ss_pred HHHHhhcceEEEecc---hhhhhHHHhccCCCeEEEecC
Confidence 368999999998753 223357999999999875433
No 192
>PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6.3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A.
Probab=63.53 E-value=11 Score=31.86 Aligned_cols=40 Identities=25% Similarity=0.241 Sum_probs=23.6
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
|||+|+....-- +...+-+ ...++.+++++||+|.++++.
T Consensus 1 Mki~fvmDpi~~-i~~~kDT--T~alm~eAq~RGhev~~~~~~ 40 (119)
T PF02951_consen 1 MKIAFVMDPIES-IKPYKDT--TFALMLEAQRRGHEVFYYEPG 40 (119)
T ss_dssp -EEEEEES-GGG---TTT-H--HHHHHHHHHHTT-EEEEE-GG
T ss_pred CeEEEEeCCHHH-CCCCCCh--HHHHHHHHHHCCCEEEEEEcC
Confidence 789999863111 1223333 345788999999999999864
No 193
>PRK00207 sulfur transfer complex subunit TusD; Validated
Probab=63.06 E-value=15 Score=31.51 Aligned_cols=37 Identities=16% Similarity=0.151 Sum_probs=29.6
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcE-EEE
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRV-MVV 105 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V-~vi 105 (576)
|||+++... .| +.+-..+-+.++|+++.+.||+| .++
T Consensus 1 m~~~iv~~~-~P--y~~~~~~~al~~A~aa~~~gh~v~~vF 38 (128)
T PRK00207 1 MRYAIAVTG-PA--YGTQQASSAYQFAQALLAEGHELVSVF 38 (128)
T ss_pred CEEEEEEcC-CC--CCCHHHHHHHHHHHHHHhCCCCeeEEE
Confidence 778888765 56 35777899999999999999994 555
No 194
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=60.24 E-value=2.3e+02 Score=29.94 Aligned_cols=99 Identities=11% Similarity=0.016 Sum_probs=63.4
Q ss_pred cCCEEEeCCCCC--CCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHh
Q 008154 456 GCDILLMPSRFE--PCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTY 533 (576)
Q Consensus 456 ~~Dv~v~ps~~E--~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~ 533 (576)
+.+-+|++-.-| ..|..+-=+...|+|+.-...|---+-+..|.+.. -..-+..-+|...+.+.+++.+.
T Consensus 240 ~~~g~IlTKlD~~argG~aLs~~~~t~~PI~fig~Ge~v~Dle~f~p~~------~~~rilgmgDi~~L~ek~~~~~~-- 311 (429)
T TIGR01425 240 DVGSVIITKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEIFKTQP------FISKLLGMGDIEGLIDKVQDLKL-- 311 (429)
T ss_pred CCcEEEEECccCCCCccHHhhhHHHHCCCeEEEcCCCChhhcCcCChHH------HHHHHhcCCCcHHHHHHHHHhhh--
Confidence 456677777655 35556655788899999887775444444433221 22233456788888888887764
Q ss_pred hhCHHHHHHHHHHHHhhhCCHHHHHHHHHHHH
Q 008154 534 REHKSSWEGLMRRGMEKDYTWENAAIQYEQVF 565 (576)
Q Consensus 534 ~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y 565 (576)
.+..+++.++-...+|+.+.+.+++.++-
T Consensus 312 ---~~~~~~~~~k~~~~~f~l~D~~~q~~~i~ 340 (429)
T TIGR01425 312 ---DDNEKALIEKLKEGTFTLRDMYEQFQNLL 340 (429)
T ss_pred ---HHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 33344555554567899999988887654
No 195
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=59.82 E-value=12 Score=34.28 Aligned_cols=33 Identities=24% Similarity=0.413 Sum_probs=26.2
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
|||+.+++ +|-+| ..+++++.++||+|+.|.-+
T Consensus 1 mKIaiIgA-------sG~~G---s~i~~EA~~RGHeVTAivRn 33 (211)
T COG2910 1 MKIAIIGA-------SGKAG---SRILKEALKRGHEVTAIVRN 33 (211)
T ss_pred CeEEEEec-------CchhH---HHHHHHHHhCCCeeEEEEeC
Confidence 78999975 35455 56788899999999999855
No 196
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=59.79 E-value=12 Score=32.21 Aligned_cols=28 Identities=36% Similarity=0.373 Sum_probs=22.4
Q ss_pred cCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 81 TGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 81 ~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
++|--.=..-++++|+++||+|.+.++.
T Consensus 8 t~Ghv~P~lala~~L~~rGh~V~~~~~~ 35 (139)
T PF03033_consen 8 TRGHVYPFLALARALRRRGHEVRLATPP 35 (139)
T ss_dssp SHHHHHHHHHHHHHHHHTT-EEEEEETG
T ss_pred ChhHHHHHHHHHHHHhccCCeEEEeecc
Confidence 5666666789999999999999988754
No 197
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=57.55 E-value=31 Score=37.26 Aligned_cols=156 Identities=15% Similarity=0.116 Sum_probs=88.6
Q ss_pred EEEecccc-cccCHHHHHHHHHhhhcCCcEEEEEeCCC--hhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEE
Q 008154 385 IGFIGRLD-YQKGIDLIRLAAPEILADDIQFVMLGSGD--PQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILL 461 (576)
Q Consensus 385 i~~~Gr~~-~~Kg~~~ll~a~~~L~~~~~~lii~G~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v 461 (576)
-+..|.-. ..|+-+..++++.+. -.++-.|.+... +..+..+ +-.+.. +......+++.+.|+|
T Consensus 280 AlVyGK~~~~w~~k~~~l~~l~~~--~eih~tV~~~~~~~~~~P~~V---------~NHG~l--~~~ef~~lL~~akvfi 346 (559)
T PF15024_consen 280 ALVYGKERYMWKGKEKYLDVLHKY--MEIHGTVYDEPQRPPNVPSFV---------KNHGIL--SGDEFQQLLRKAKVFI 346 (559)
T ss_pred eEEEccchhhhcCcHHHHHHHHhh--cEEEEEeccCCCCCcccchhh---------hhcCcC--CHHHHHHHHHhhhEee
Confidence 33344433 356777778877664 245545443322 1122211 112333 3455668999999999
Q ss_pred eCCC-CCCCcHHHHHHHHcCCceEEeCccccc-----ccccccccccc---------C-CCCCcceeEeCCCCHHHHHHH
Q 008154 462 MPSR-FEPCGLNQLYAMRYGTIPVVHATGGLR-----DTVENFNPFAR---------E-GSGEGTGWSFLPLSEESMLTA 525 (576)
Q Consensus 462 ~ps~-~E~~g~s~lEAma~G~pvIat~~gg~~-----e~i~~~~~~~~---------~-~~~~~~G~~~~~~d~~~la~~ 525 (576)
--.. +| |=+++||+|+|+|.|-....... +.+.+- +..+ | .-+.-..|.++..|.+++.++
T Consensus 347 GlGfP~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~K-Pt~r~~~SQhPY~e~~iG~PhVytVd~~n~~~v~~A 423 (559)
T PF15024_consen 347 GLGFPYE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGK-PTLREWTSQHPYAEEFIGEPHVYTVDINNSTEVEAA 423 (559)
T ss_pred ecCCCCC--CCChHHHHHcCCccccccCCCCCcccccccccCC-CCcceeccCChHHHhhCCCCeEEEEcCCCHHHHHHH
Confidence 6554 56 55899999999999986543221 111110 0000 1 012345788888899999999
Q ss_pred HHHHHHHhhhCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHH
Q 008154 526 LRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 526 i~~~l~~~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y~ 566 (576)
|++++.... +| -+--.|+-+-|.++.....+
T Consensus 424 vk~il~~~v-~P---------y~P~efT~egmLeRv~~~ie 454 (559)
T PF15024_consen 424 VKAILATPV-EP---------YLPYEFTCEGMLERVNALIE 454 (559)
T ss_pred HHHHHhcCC-CC---------cCCcccCHHHHHHHHHHHHH
Confidence 998886321 11 02246777777777755543
No 198
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=56.97 E-value=10 Score=35.27 Aligned_cols=42 Identities=21% Similarity=0.364 Sum_probs=34.3
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCC
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNG 112 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~ 112 (576)
|...+++. +| ..|=.+++.+|+++|++.+|+|..++.+|..+
T Consensus 1 mpLiIlTG--yP---gsGKTtfakeLak~L~~~i~~vi~l~kdy~~~ 42 (261)
T COG4088 1 MPLIILTG--YP---GSGKTTFAKELAKELRQEIWRVIHLEKDYLRG 42 (261)
T ss_pred CceEEEec--CC---CCCchHHHHHHHHHHHHhhhhccccchhhhhh
Confidence 34555654 57 58899999999999999999999999877654
No 199
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=55.11 E-value=2e+02 Score=30.51 Aligned_cols=97 Identities=12% Similarity=0.011 Sum_probs=59.3
Q ss_pred CEEEeCCCCC--CCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhh
Q 008154 458 DILLMPSRFE--PCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYRE 535 (576)
Q Consensus 458 Dv~v~ps~~E--~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~ 535 (576)
+-+|++-.-+ -.|..+-=+.+.|+|+.-...|.-.+-+..|++.. -...+..-+|...+.+.+++.+
T Consensus 242 ~giIlTKlD~~~~~G~~lsi~~~~~~PI~fi~~Ge~i~dl~~f~p~~------~~~~iLg~gD~~~l~e~~~~~~----- 310 (428)
T TIGR00959 242 TGVVLTKLDGDARGGAALSVRSVTGKPIKFIGVGEKIDDLEPFHPER------MASRILGMGDILSLVEKAQEVV----- 310 (428)
T ss_pred CEEEEeCccCcccccHHHHHHHHHCcCEEEEeCCCChhhCccCCHHH------HHHHHhCCCChHHHHHHHHHhh-----
Confidence 4445544332 34544444566899999887775444444433221 2344456678888888777765
Q ss_pred CHHHHHHHHHHHHhhhCCHHHHHHHHHHHH
Q 008154 536 HKSSWEGLMRRGMEKDYTWENAAIQYEQVF 565 (576)
Q Consensus 536 ~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y 565 (576)
+.+..+++.++-...+|+.+.+.+++.++-
T Consensus 311 ~~~~~~~~~~~~~~~~f~l~d~~~q~~~~~ 340 (428)
T TIGR00959 311 DEEEAKKLAEKMKKGQFDLEDFLEQLRQIK 340 (428)
T ss_pred CHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 333445555555556899999988887654
No 200
>PF11897 DUF3417: Protein of unknown function (DUF3417); InterPro: IPR024517 This domain of unknown function is found at the N terminus of members of the glycogen phosphorylase family.
Probab=54.45 E-value=7.9 Score=32.75 Aligned_cols=41 Identities=15% Similarity=0.081 Sum_probs=23.8
Q ss_pred HHHHhHHhhhhccccCCc-ccchhhhhhhhhhhccCCCceEEEEeeccC
Q 008154 29 LLRVYHEVIDSSKDIDGY-GVKKIEDVEGEDKAQTRVSYNIVFVTAEAA 76 (576)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~mkI~~~s~e~~ 76 (576)
|+..++.++.+...|... .++... ........|||||+||.
T Consensus 72 fl~~~~~v~~~f~~Ym~~~~~W~~~-------~~~~~~~~IAYFSmEfG 113 (118)
T PF11897_consen 72 FLARYDRVYARFEEYMSQKPTWFQE-------PGDTPNPPIAYFSMEFG 113 (118)
T ss_pred HHHHHHHHHHHHHHHHcCCCccccC-------CCCCCCCCEEEEccccc
Confidence 455566666666665555 333332 11223567999999964
No 201
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=54.07 E-value=18 Score=39.20 Aligned_cols=37 Identities=32% Similarity=0.351 Sum_probs=29.3
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
||+.+++. ..+---.....++++|+++||+|++++|.
T Consensus 22 kIl~~~P~-----~~~SH~~~~~~l~~~La~rGH~VTvi~p~ 58 (507)
T PHA03392 22 RILAVFPT-----PAYSHHSVFKVYVEALAERGHNVTVIKPT 58 (507)
T ss_pred cEEEEcCC-----CCCcHHHHHHHHHHHHHHcCCeEEEEecc
Confidence 48777532 23556788999999999999999999875
No 202
>PRK10867 signal recognition particle protein; Provisional
Probab=53.75 E-value=2.2e+02 Score=30.13 Aligned_cols=98 Identities=14% Similarity=0.037 Sum_probs=60.2
Q ss_pred CCEEEeCCCCC--CCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhh
Q 008154 457 CDILLMPSRFE--PCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYR 534 (576)
Q Consensus 457 ~Dv~v~ps~~E--~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~ 534 (576)
.+-+|++-.-+ -.|..+-=+...|+|+.-.-.|---+-+..|.+.. -...++.-+|...+.+.+++.+
T Consensus 242 i~giIlTKlD~~~rgG~alsi~~~~~~PI~fig~Ge~v~DLe~f~p~~------~~~~ilgmgD~~~l~e~~~~~~---- 311 (433)
T PRK10867 242 LTGVILTKLDGDARGGAALSIRAVTGKPIKFIGTGEKLDDLEPFHPDR------MASRILGMGDVLSLIEKAQEVV---- 311 (433)
T ss_pred CCEEEEeCccCcccccHHHHHHHHHCcCEEEEeCCCccccCccCCHHH------HHHHHhCCCChHHHHHHHHHhh----
Confidence 34555555433 24444444567799999877764444444443322 2334446678888777777765
Q ss_pred hCHHHHHHHHHHHHhhhCCHHHHHHHHHHHH
Q 008154 535 EHKSSWEGLMRRGMEKDYTWENAAIQYEQVF 565 (576)
Q Consensus 535 ~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y 565 (576)
+.+..+++.++-...+|+.+.+.+++.++-
T Consensus 312 -~~~~~~~~~~~~~~g~f~l~d~~~q~~~~~ 341 (433)
T PRK10867 312 -DEEKAEKLAKKLKKGKFDLEDFLEQLQQMK 341 (433)
T ss_pred -CHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 344445566555567899999988887654
No 203
>PLN03015 UDP-glucosyl transferase
Probab=52.01 E-value=3.3e+02 Score=29.22 Aligned_cols=37 Identities=16% Similarity=0.077 Sum_probs=28.7
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhC-CCcEEEEEecC
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR-GHRVMVVSPRY 109 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~-G~~V~vi~~~~ 109 (576)
+|+++. +| .-|--+=+.++|+.|+.+ |..|++++...
T Consensus 5 Hvvl~P---~p---~qGHi~P~l~LAk~La~~~g~~vT~v~t~~ 42 (470)
T PLN03015 5 HALLVA---SP---GLGHLIPILELGNRLSSVLNIHVTILAVTS 42 (470)
T ss_pred EEEEEC---Cc---ccccHHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 677773 34 457778889999999976 99999997553
No 204
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=51.98 E-value=51 Score=29.05 Aligned_cols=93 Identities=15% Similarity=0.222 Sum_probs=54.2
Q ss_pred EEEEecccccccCHHHHHHHH------HhhhcCCc-EEEE-EeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHh
Q 008154 384 LIGFIGRLDYQKGIDLIRLAA------PEILADDI-QFVM-LGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA 455 (576)
Q Consensus 384 ~i~~~Gr~~~~Kg~~~ll~a~------~~L~~~~~-~lii-~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 455 (576)
+++++|.-. .+.|+.+. +.|.+..+ +++| +|.|.+..+.-.+.+.......+.+ -.|.+++ .+.++
T Consensus 6 vFVTVGtT~----Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~~~~d~~~~~~k~~gl~id~-y~f~psl-~e~I~ 79 (170)
T KOG3349|consen 6 VFVTVGTTS----FDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQPFFGDPIDLIRKNGGLTIDG-YDFSPSL-TEDIR 79 (170)
T ss_pred EEEEecccc----HHHHHHHHcCHHHHHHHHHcCccEEEEEecCCccCCCCHHHhhcccCCeEEEE-EecCccH-HHHHh
Confidence 456666432 56666544 44544443 4444 7877433333344443222223332 2355554 36889
Q ss_pred cCCEEEeCCCCCCCcHHHHHHHHcCCceEEe
Q 008154 456 GCDILLMPSRFEPCGLNQLYAMRYGTIPVVH 486 (576)
Q Consensus 456 ~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat 486 (576)
.||++|-- +-.-|++|.+..|+|.|+.
T Consensus 80 ~AdlVIsH----AGaGS~letL~l~KPlivV 106 (170)
T KOG3349|consen 80 SADLVISH----AGAGSCLETLRLGKPLIVV 106 (170)
T ss_pred hccEEEec----CCcchHHHHHHcCCCEEEE
Confidence 99999843 3445799999999999874
No 205
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=48.10 E-value=46 Score=27.24 Aligned_cols=32 Identities=6% Similarity=0.254 Sum_probs=26.6
Q ss_pred CCcEEEEEeCCChhhHHHHHHHHHHhcCceEE
Q 008154 410 DDIQFVMLGSGDPQFESWMRDTEATYKDKYRG 441 (576)
Q Consensus 410 ~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~ 441 (576)
++.+++++||.-+.+.+...++.+..++++..
T Consensus 63 P~~kfiLIGDsgq~DpeiY~~ia~~~P~~i~a 94 (100)
T PF09949_consen 63 PERKFILIGDSGQHDPEIYAEIARRFPGRILA 94 (100)
T ss_pred CCCcEEEEeeCCCcCHHHHHHHHHHCCCCEEE
Confidence 67899999997667788899999988887653
No 206
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=48.00 E-value=61 Score=31.58 Aligned_cols=45 Identities=22% Similarity=0.217 Sum_probs=32.7
Q ss_pred HHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCcccccccc
Q 008154 451 HRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTV 495 (576)
Q Consensus 451 ~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i 495 (576)
..++..+|+++.-+..+..--....|+.+|+|+|....|...+.+
T Consensus 55 ~~ll~~~DvVid~t~p~~~~~~~~~al~~G~~vvigttG~s~~~~ 99 (257)
T PRK00048 55 EAVLADADVLIDFTTPEATLENLEFALEHGKPLVIGTTGFTEEQL 99 (257)
T ss_pred HHhccCCCEEEECCCHHHHHHHHHHHHHcCCCEEEECCCCCHHHH
Confidence 346678999996665555555668899999999987666655444
No 207
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=47.91 E-value=24 Score=33.46 Aligned_cols=26 Identities=35% Similarity=0.604 Sum_probs=21.7
Q ss_pred CcHHHHHhhHHHHHHhCCCcEEEEEe
Q 008154 82 GGLGDVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 82 GG~~~~~~~la~~l~~~G~~V~vi~~ 107 (576)
||.|.+-..+++.|++.||+|.++..
T Consensus 7 GG~G~mG~ala~~L~~~G~~V~v~~r 32 (219)
T TIGR01915 7 GGTGDQGKGLALRLAKAGNKIIIGSR 32 (219)
T ss_pred cCCCHHHHHHHHHHHhCCCEEEEEEc
Confidence 66777778899999999999988753
No 208
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=47.85 E-value=77 Score=28.48 Aligned_cols=18 Identities=22% Similarity=0.220 Sum_probs=15.1
Q ss_pred HhccceeccCccchhhhc
Q 008154 295 VTADRLLTVSKGYSWEIT 312 (576)
Q Consensus 295 ~~ad~v~~vS~~~~~~~~ 312 (576)
..+|..++.|+..++++.
T Consensus 136 ~~~D~y~Vase~~~~~l~ 153 (169)
T PF06925_consen 136 PGVDRYFVASEEVKEELI 153 (169)
T ss_pred CCCCEEEECCHHHHHHHH
Confidence 468999999999988774
No 209
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=46.85 E-value=1.7e+02 Score=26.44 Aligned_cols=28 Identities=29% Similarity=0.280 Sum_probs=20.2
Q ss_pred cCcHHHHHhhHHHHH-HhC-CCcEEEEEec
Q 008154 81 TGGLGDVCGSLPVAL-AAR-GHRVMVVSPR 108 (576)
Q Consensus 81 ~GG~~~~~~~la~~l-~~~-G~~V~vi~~~ 108 (576)
+||-..-+..+.+.+ .+. .++..+++-.
T Consensus 7 sGGHt~eml~L~~~~~~~~~~~~~~ivt~~ 36 (170)
T PF08660_consen 7 SGGHTAEMLRLLKALDNDRYQPRTYIVTEG 36 (170)
T ss_pred CcHHHHHHHHHHHHhhhhcCCCcEEEEEcC
Confidence 699999999999998 333 4556666643
No 210
>TIGR00288 conserved hypothetical protein TIGR00288. This family of orthologs is restricted to but universal among the completed archaeal genomes so far. Eubacterial proteins showing at least local homology include slr1870 from Synechocystis PCC6803 and two proteins from Aquifex aeolicusr, none of which is characterized.
Probab=46.77 E-value=85 Score=28.11 Aligned_cols=67 Identities=12% Similarity=0.076 Sum_probs=43.7
Q ss_pred ccCHHHHHHHHHhhhcC--CcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEeCC
Q 008154 394 QKGIDLIRLAAPEILAD--DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPS 464 (576)
Q Consensus 394 ~Kg~~~ll~a~~~L~~~--~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps 464 (576)
.=.+.+.++|++.+-.+ +.-.++.|+++ ...+...+++. ..++.++. ........+.+.||-|+.-.
T Consensus 88 ~~Dv~laIDame~~~~~~iD~~vLvSgD~D--F~~Lv~~lre~-G~~V~v~g-~~~~ts~~L~~acd~FI~L~ 156 (160)
T TIGR00288 88 DVDVRMAVEAMELIYNPNIDAVALVTRDAD--FLPVINKAKEN-GKETIVIG-AEPGFSTALQNSADIAIILG 156 (160)
T ss_pred cccHHHHHHHHHHhccCCCCEEEEEeccHh--HHHHHHHHHHC-CCEEEEEe-CCCCChHHHHHhcCeEEeCC
Confidence 34578899999888554 44455555554 78888888776 33444433 23333456899999988643
No 211
>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family. The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.
Probab=44.89 E-value=1.4e+02 Score=27.33 Aligned_cols=100 Identities=15% Similarity=0.111 Sum_probs=62.4
Q ss_pred cCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhc-CceEEEccC-ChhHHHHHH-----hcCCEEEe---CC
Q 008154 395 KGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYK-DKYRGWVGF-NVPISHRIT-----AGCDILLM---PS 464 (576)
Q Consensus 395 Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~ll-----~~~Dv~v~---ps 464 (576)
-|.|++.+.++...+++.++.++|..+...+...+.+.+.++ .++++..+| +++....+. +++|+++. .+
T Consensus 32 ~G~dl~~~l~~~~~~~~~~vfllG~~~~v~~~~~~~l~~~yP~l~i~g~~g~f~~~~~~~i~~~I~~s~~dil~VglG~P 111 (177)
T TIGR00696 32 AGPDLMEELCQRAGKEKLPIFLYGGKPDVLQQLKVKLIKEYPKLKIVGAFGPLEPEERKAALAKIARSGAGIVFVGLGCP 111 (177)
T ss_pred ChHHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCChHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 388999898888877788999999987667777888877765 345665554 333222222 58888876 34
Q ss_pred CCCCCcHHHHHHHHcCCceEEeCcccccccccc
Q 008154 465 RFEPCGLNQLYAMRYGTIPVVHATGGLRDTVEN 497 (576)
Q Consensus 465 ~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~ 497 (576)
..|-|-....+ ....+++ -..|+.-+.+..
T Consensus 112 kQE~~~~~~~~--~~~~~v~-~gvGg~fd~~aG 141 (177)
T TIGR00696 112 KQEIWMRNHRH--LKPDAVM-IGVGGSFDVFSG 141 (177)
T ss_pred HhHHHHHHhHH--hCCCcEE-EEeceeeeeccc
Confidence 46655433222 2233333 337776666543
No 212
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=44.86 E-value=34 Score=30.61 Aligned_cols=38 Identities=18% Similarity=0.184 Sum_probs=28.1
Q ss_pred HHHhcCCEEEeCCC--CC--CCc--HHHHHHHHcCCceEEeCcc
Q 008154 452 RITAGCDILLMPSR--FE--PCG--LNQLYAMRYGTIPVVHATG 489 (576)
Q Consensus 452 ~ll~~~Dv~v~ps~--~E--~~g--~s~lEAma~G~pvIat~~g 489 (576)
.+-.++|++|.+-. .| +-| -.+.+|++.|+||+++-..
T Consensus 89 al~~~~DLlivNkFGk~Ea~G~Glr~~i~~A~~~giPVLt~V~~ 132 (159)
T PF10649_consen 89 ALAEGADLLIVNKFGKQEAEGRGLRDEIAAALAAGIPVLTAVPP 132 (159)
T ss_pred HHhcCCCEEEEcccHHhhhcCCCHHHHHHHHHHCCCCEEEEECH
Confidence 34467999999876 44 444 4568999999999996433
No 213
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=43.67 E-value=24 Score=37.12 Aligned_cols=38 Identities=32% Similarity=0.438 Sum_probs=29.8
Q ss_pred CceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 65 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
+|||++++. | .-|--.-..-++++|+++||+|++++..
T Consensus 1 ~mkil~~~~---~---~~Ghv~p~~aL~~eL~~~gheV~~~~~~ 38 (406)
T COG1819 1 RMKILFVVC---G---AYGHVNPCLALGKELRRRGHEVVFASTG 38 (406)
T ss_pred CceEEEEec---c---ccccccchHHHHHHHHhcCCeEEEEeCH
Confidence 489999973 4 2445555678999999999999999854
No 214
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=41.83 E-value=34 Score=35.35 Aligned_cols=38 Identities=18% Similarity=0.221 Sum_probs=29.7
Q ss_pred hccCCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEe
Q 008154 60 AQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 60 ~~~~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~ 107 (576)
++...+|||+++ ||.|..=..+++.|.+.||+|+++.-
T Consensus 16 ~~~~~~~~IlVt----------GgtGfIG~~l~~~L~~~G~~V~~v~r 53 (370)
T PLN02695 16 YWPSEKLRICIT----------GAGGFIASHIARRLKAEGHYIIASDW 53 (370)
T ss_pred CCCCCCCEEEEE----------CCccHHHHHHHHHHHhCCCEEEEEEe
Confidence 444567898866 66666678899999999999999863
No 215
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=41.14 E-value=2.3e+02 Score=31.28 Aligned_cols=184 Identities=14% Similarity=0.010 Sum_probs=91.2
Q ss_pred HHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHH-Hh-cCceEEEccC-
Q 008154 371 QKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEA-TY-KDKYRGWVGF- 445 (576)
Q Consensus 371 ~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~-~~-~~~~~~~~~~- 445 (576)
+..+++| ++.++++.... -+|=-...++.+.++.+ ++-.|.+.-..--..+....-+.+ .+ +.+++ +.+.
T Consensus 750 r~~y~Lp--~d~vvf~~FNq--LyKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge~rf~ty~~~~Gl~p~rii-fs~va 824 (966)
T KOG4626|consen 750 RSQYGLP--EDAVVFCNFNQ--LYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEQRFRTYAEQLGLEPDRII-FSPVA 824 (966)
T ss_pred CCCCCCC--CCeEEEeechh--hhcCCHHHHHHHHHHHHhCCcceeEEEeccccchHHHHHHHHHhCCCcccee-ecccc
Confidence 4557777 45444444333 35555566677666554 555555544321111222222222 12 23443 3332
Q ss_pred ChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHH
Q 008154 446 NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTA 525 (576)
Q Consensus 446 ~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~ 525 (576)
-.++-.+-.+-+||++-++.+-+ -++.++.+.+|+|+|+-...-...-+..-.... -+.|-++.. +-++..+.
T Consensus 825 ~k~eHvrr~~LaDv~LDTplcnG-hTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~-----~Gl~hliak-~~eEY~~i 897 (966)
T KOG4626|consen 825 AKEEHVRRGQLADVCLDTPLCNG-HTTGMDVLWAGVPMVTMPGETLASRVAASLLTA-----LGLGHLIAK-NREEYVQI 897 (966)
T ss_pred chHHHHHhhhhhhhcccCcCcCC-cccchhhhccCCceeecccHHHHHHHHHHHHHH-----cccHHHHhh-hHHHHHHH
Confidence 11222245688999999887543 367899999999999854322221111100000 122223322 33333222
Q ss_pred HHHHHHHhhhCHHHHHHHHHHH---H--hhhCCHHHHHHHHHHHHHHhhh
Q 008154 526 LRFAIRTYREHKSSWEGLMRRG---M--EKDYTWENAAIQYEQVFEWASI 570 (576)
Q Consensus 526 i~~~l~~~~~~~~~~~~~~~~a---~--~~~fs~~~~~~~y~~~y~~~~~ 570 (576)
-.++ ..|.+..+++...- + ..-|+..+.+..+++.|.++.+
T Consensus 898 aV~L----atd~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~MW~ 943 (966)
T KOG4626|consen 898 AVRL----ATDKEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQMWK 943 (966)
T ss_pred HHHh----hcCHHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHHHHH
Confidence 2221 13544444443322 1 2369999999999999887653
No 216
>PF02374 ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_A 3IBG_B 3SJA_A 3H84_B 3SJD_A 3ZS9_A 3A37_A 2WOJ_A 3SJC_B 3A36_B ....
Probab=41.04 E-value=33 Score=34.45 Aligned_cols=37 Identities=38% Similarity=0.671 Sum_probs=26.4
Q ss_pred ceEEEEeeccCCccccCcHHHH--HhhHHHHHHhCCCcEEEEEecC
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDV--CGSLPVALAARGHRVMVVSPRY 109 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~--~~~la~~l~~~G~~V~vi~~~~ 109 (576)
|||++|+. -||+|.- +..+|..+++.|++|.+++.+.
T Consensus 1 ~r~~~~~G-------KGGVGKTT~aaA~A~~~A~~G~rtLlvS~Dp 39 (305)
T PF02374_consen 1 MRILFFGG-------KGGVGKTTVAAALALALARRGKRTLLVSTDP 39 (305)
T ss_dssp -SEEEEEE-------STTSSHHHHHHHHHHHHHHTTS-EEEEESST
T ss_pred CeEEEEec-------CCCCCcHHHHHHHHHHHhhCCCCeeEeecCC
Confidence 78899975 3666654 4557777888999999998663
No 217
>cd01020 TroA_b Metal binding protein TroA_b. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=40.40 E-value=1.3e+02 Score=29.34 Aligned_cols=81 Identities=15% Similarity=0.151 Sum_probs=49.8
Q ss_pred HHHhcCCEEEeCCC-CCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHH
Q 008154 452 RITAGCDILLMPSR-FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAI 530 (576)
Q Consensus 452 ~ll~~~Dv~v~ps~-~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l 530 (576)
.-++.||++|.... .|+|=-.+++.+ .+.+++....++..+ + ....--+..+|.+...+++.|.+.|
T Consensus 48 ~~l~~ADliv~~G~~lE~~~~k~~~~~-~~~~v~~~~~~~~~~---~--------~~~dPH~Wldp~n~~~~a~~I~~~L 115 (264)
T cd01020 48 AKVSTADIVVYNGGGYDPWMTKLLADT-KDVIVIAADLDGHDD---K--------EGDNPHLWYDPETMSKVANALADAL 115 (264)
T ss_pred HHHhhCCEEEEeCCCchHHHHHHHHhc-CCceEEeeecccccC---C--------CCCCCceecCHhHHHHHHHHHHHHH
Confidence 46899999998875 687766666655 455666654433211 0 0012234457888999999999998
Q ss_pred HHhhhCHHHHHHHHHH
Q 008154 531 RTYREHKSSWEGLMRR 546 (576)
Q Consensus 531 ~~~~~~~~~~~~~~~~ 546 (576)
... ||+......++
T Consensus 116 ~~~--dP~~~~~y~~N 129 (264)
T cd01020 116 VKA--DPDNKKYYQAN 129 (264)
T ss_pred HHh--CcccHHHHHHH
Confidence 754 55443333333
No 218
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=40.12 E-value=1.8e+02 Score=26.25 Aligned_cols=101 Identities=20% Similarity=0.223 Sum_probs=63.9
Q ss_pred cccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhc-CceEE-EccC-ChhHHHHH---H--hcCCEEEe--
Q 008154 393 YQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYK-DKYRG-WVGF-NVPISHRI---T--AGCDILLM-- 462 (576)
Q Consensus 393 ~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~-~~~~~-~~~~-~~~~~~~l---l--~~~Dv~v~-- 462 (576)
.--|.+++.+.++...+++.++.++|..++..+...+.+.+.++ .++++ ..++ ..+....+ + .+.|+++.
T Consensus 28 r~~g~dl~~~ll~~~~~~~~~v~llG~~~~~~~~~~~~l~~~yp~l~i~g~~~g~~~~~~~~~i~~~I~~~~pdiv~vgl 107 (171)
T cd06533 28 RVTGSDLMPALLELAAQKGLRVFLLGAKPEVLEKAAERLRARYPGLKIVGYHHGYFGPEEEEEIIERINASGADILFVGL 107 (171)
T ss_pred ccCcHHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHHHHHHCCCcEEEEecCCCCChhhHHHHHHHHHHcCCCEEEEEC
Confidence 44589999999988877789999999987666777777777654 45555 3444 22221112 2 57888876
Q ss_pred -CCCCCCCcHHHHHHHHcCCceEEeCccccccccc
Q 008154 463 -PSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVE 496 (576)
Q Consensus 463 -ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~ 496 (576)
.+..|-|.....+.+ ..+++.+ .|+.-+.+.
T Consensus 108 G~PkQE~~~~~~~~~l--~~~v~~~-vG~~~d~~a 139 (171)
T cd06533 108 GAPKQELWIARHKDRL--PVPVAIG-VGGSFDFLA 139 (171)
T ss_pred CCCHHHHHHHHHHHHC--CCCEEEE-eceeeEecc
Confidence 344677766666555 3333333 565555544
No 219
>PRK10840 transcriptional regulator RcsB; Provisional
Probab=40.02 E-value=3.1e+02 Score=25.38 Aligned_cols=66 Identities=9% Similarity=0.083 Sum_probs=43.7
Q ss_pred cCCEEEeCCCCCC----CcHHHHHHHHc---CCceEE-eCcccc---ccccccccccccCCCCCcceeEeCCCCHHHHHH
Q 008154 456 GCDILLMPSRFEP----CGLNQLYAMRY---GTIPVV-HATGGL---RDTVENFNPFAREGSGEGTGWSFLPLSEESMLT 524 (576)
Q Consensus 456 ~~Dv~v~ps~~E~----~g~s~lEAma~---G~pvIa-t~~gg~---~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~ 524 (576)
..|+++.-....+ .|...++.+.. ++|+|. +..... .+.+.. |..|++..+.+++++.+
T Consensus 49 ~~DlvllD~~l~~~~~~~g~~~~~~l~~~~~~~~iIvls~~~~~~~~~~a~~~----------Ga~~yl~K~~~~~~l~~ 118 (216)
T PRK10840 49 DAHVLITDLSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDL----------DIEGIVLKQGAPTDLPK 118 (216)
T ss_pred CCCEEEEeCcCCCCCCCCHHHHHHHHHHHCCCCcEEEEEecCCHHHHHHHHHC----------CCeEEEECCCCHHHHHH
Confidence 5798887654332 67777777643 456665 333221 233444 78999999999999999
Q ss_pred HHHHHHH
Q 008154 525 ALRFAIR 531 (576)
Q Consensus 525 ~i~~~l~ 531 (576)
+|..+..
T Consensus 119 ai~~v~~ 125 (216)
T PRK10840 119 ALAALQK 125 (216)
T ss_pred HHHHHHC
Confidence 9887754
No 220
>PF03358 FMN_red: NADPH-dependent FMN reductase; InterPro: IPR005025 NADPH-dependent FMN reductase (1.5.1.29 from EC) reduces FMN and also reduces riboflavin and FAD, although more slowly. Members of this entry catalyse the reaction NAD(P)H + FMN = NAD(P)(+) + FMNH(2).; PDB: 3SVL_B 3GFS_F 3GFQ_A 1NNI_1 2GSW_B 3GFR_D 1T0I_B 3D7N_A 2R97_A 3B6K_A ....
Probab=39.55 E-value=50 Score=28.90 Aligned_cols=40 Identities=13% Similarity=0.235 Sum_probs=30.2
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
|||+.++...-+ .|-...++..+++.+.+.|+++.++-+.
T Consensus 1 Mkilii~gS~r~---~~~t~~l~~~~~~~l~~~g~e~~~i~l~ 40 (152)
T PF03358_consen 1 MKILIINGSPRK---NSNTRKLAEAVAEQLEEAGAEVEVIDLA 40 (152)
T ss_dssp -EEEEEESSSST---TSHHHHHHHHHHHHHHHTTEEEEEEECT
T ss_pred CEEEEEECcCCC---CCHHHHHHHHHHHHHHHcCCEEEEEecc
Confidence 899999876323 4667777777888888889999999654
No 221
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=38.91 E-value=41 Score=33.82 Aligned_cols=35 Identities=23% Similarity=0.282 Sum_probs=26.4
Q ss_pred CCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 63 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 63 ~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
...|||+++. .|++|.+ ++..|++.||+|++++..
T Consensus 3 ~~~m~I~IiG--------~GaiG~~---lA~~L~~~g~~V~~~~r~ 37 (313)
T PRK06249 3 SETPRIGIIG--------TGAIGGF---YGAMLARAGFDVHFLLRS 37 (313)
T ss_pred CcCcEEEEEC--------CCHHHHH---HHHHHHHCCCeEEEEEeC
Confidence 3458999883 3778755 556788899999999753
No 222
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=38.73 E-value=43 Score=33.21 Aligned_cols=64 Identities=14% Similarity=0.128 Sum_probs=42.7
Q ss_pred HHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCcc---ccccccccccccccCCCCCcceeEeCCCCHHHHH
Q 008154 450 SHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG---GLRDTVENFNPFAREGSGEGTGWSFLPLSEESML 523 (576)
Q Consensus 450 ~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~g---g~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la 523 (576)
....|+.+..++.|.=..++..-+.|||++|+..|...++ -+.+.+.= ....+.++..+..++.
T Consensus 230 ~~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw----------~~fsv~v~~~~~~~l~ 296 (302)
T PF03016_consen 230 YMELLRNSKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDW----------SRFSVRVPEADLPELP 296 (302)
T ss_pred HHHhcccCeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCH----------HHEEEEECHHHHHHHH
Confidence 3468899999999877777899999999999866654332 22334422 4556666554544433
No 223
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=38.62 E-value=45 Score=32.48 Aligned_cols=41 Identities=22% Similarity=0.280 Sum_probs=29.0
Q ss_pred CCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCC
Q 008154 63 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFN 111 (576)
Q Consensus 63 ~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~ 111 (576)
+++|||+..+..... +-| +..|+++|++.| +|+|++|.-.+
T Consensus 3 ~~~M~ILltNDDGi~---a~G----i~aL~~~l~~~g-~V~VvAP~~~~ 43 (257)
T PRK13932 3 DKKPHILVCNDDGIE---GEG----IHVLAASMKKIG-RVTVVAPAEPH 43 (257)
T ss_pred CCCCEEEEECCCCCC---CHH----HHHHHHHHHhCC-CEEEEcCCCCC
Confidence 456999988776432 233 455677888888 79999998655
No 224
>KOG2884 consensus 26S proteasome regulatory complex, subunit RPN10/PSMD4 [Posttranslational modification, protein turnover, chaperones]
Probab=38.42 E-value=3.5e+02 Score=25.53 Aligned_cols=118 Identities=14% Similarity=0.220 Sum_probs=59.4
Q ss_pred CCEEEEecccc-cccCHHHHHHHHHhhhcCCcEEEEE--eCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCC
Q 008154 382 CPLIGFIGRLD-YQKGIDLIRLAAPEILADDIQFVML--GSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCD 458 (576)
Q Consensus 382 ~~~i~~~Gr~~-~~Kg~~~ll~a~~~L~~~~~~lii~--G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~D 458 (576)
.-+|+|+|.=. ..+. .|+...++|++.+|.+.|+ |.....-+.+...+.. .+.. =.++.
T Consensus 108 ~riVvFvGSpi~e~ek--eLv~~akrlkk~~Vaidii~FGE~~~~~e~l~~fida-~N~~---------------~~gsh 169 (259)
T KOG2884|consen 108 QRIVVFVGSPIEESEK--ELVKLAKRLKKNKVAIDIINFGEAENNTEKLFEFIDA-LNGK---------------GDGSH 169 (259)
T ss_pred eEEEEEecCcchhhHH--HHHHHHHHHHhcCeeEEEEEeccccccHHHHHHHHHH-hcCC---------------CCCce
Confidence 45789999744 3333 6677777887766555554 5443221222221111 1100 12445
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHH
Q 008154 459 ILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 459 v~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
++..|+- - .++-...-.|++.-+.|+..-.... .++..-|-++|.+..+||.+|+--++
T Consensus 170 lv~Vppg-----~-~L~d~l~ssPii~ge~g~a~~~~~a--------~g~~f~fgvdp~~DPELAlALRlSME 228 (259)
T KOG2884|consen 170 LVSVPPG-----P-LLSDALLSSPIIQGEDGGAAAGLGA--------NGMDFEFGVDPEDDPELALALRLSME 228 (259)
T ss_pred EEEeCCC-----c-cHHHHhhcCceeccCcccccccccc--------cccccccCCCcccCHHHHHHHHhhHH
Confidence 5555542 1 3333445568888776654443322 01223333456666678888776654
No 225
>PRK10360 DNA-binding transcriptional activator UhpA; Provisional
Probab=38.35 E-value=2.9e+02 Score=24.65 Aligned_cols=66 Identities=12% Similarity=0.229 Sum_probs=45.9
Q ss_pred cCCEEEeCCCC-CCCcHHHHHHHHcCCceEEeC-ccccc---cccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHH
Q 008154 456 GCDILLMPSRF-EPCGLNQLYAMRYGTIPVVHA-TGGLR---DTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAI 530 (576)
Q Consensus 456 ~~Dv~v~ps~~-E~~g~s~lEAma~G~pvIat~-~gg~~---e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l 530 (576)
..|+++.-... +.-|...++.+....|+|... ..... +.+.. |..+++..|.+.+++.+++..++
T Consensus 47 ~~dlvi~d~~~~~~~g~~~~~~l~~~~~vi~~s~~~~~~~~~~~~~~----------ga~~~i~kp~~~~~l~~~i~~~~ 116 (196)
T PRK10360 47 GVQVCICDISMPDISGLELLSQLPKGMATIMLSVHDSPALVEQALNA----------GARGFLSKRCSPDELIAAVHTVA 116 (196)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHccCCCEEEEECCCCHHHHHHHHHc----------CCcEEEECCCCHHHHHHHHHHHH
Confidence 46888876543 456778888777777887743 22222 23333 77899999999999999988876
Q ss_pred H
Q 008154 531 R 531 (576)
Q Consensus 531 ~ 531 (576)
.
T Consensus 117 ~ 117 (196)
T PRK10360 117 T 117 (196)
T ss_pred c
Confidence 4
No 226
>CHL00072 chlL photochlorophyllide reductase subunit L
Probab=38.29 E-value=36 Score=33.89 Aligned_cols=35 Identities=26% Similarity=0.544 Sum_probs=28.1
Q ss_pred ceEEEEeeccCCccccCcHH--HHHhhHHHHHHhCCCcEEEEEec
Q 008154 66 YNIVFVTAEAAPYSKTGGLG--DVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~--~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
|||++.. -||+| +.+..+|.+|+++|.+|.+|-.+
T Consensus 1 m~ia~~g--------KGGVGKTTta~nLA~~La~~G~rVLlID~D 37 (290)
T CHL00072 1 MKLAVYG--------KGGIGKSTTSCNISIALARRGKKVLQIGCD 37 (290)
T ss_pred CeEEEEC--------CCCCcHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 6777774 26665 56789999999999999999765
No 227
>PRK13236 nitrogenase reductase; Reviewed
Probab=37.23 E-value=46 Score=33.23 Aligned_cols=41 Identities=22% Similarity=0.362 Sum_probs=31.1
Q ss_pred ccCCCceEEEEeeccCCccccCcHH--HHHhhHHHHHHhCCCcEEEEEec
Q 008154 61 QTRVSYNIVFVTAEAAPYSKTGGLG--DVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 61 ~~~~~mkI~~~s~e~~P~~~~GG~~--~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
|++..|||.-|+. -||+| +.+..||-+|+++|.+|.+|-.+
T Consensus 1 ~~~~~~~~~~~~G-------KGGVGKTt~a~NLA~~La~~G~rVLliD~D 43 (296)
T PRK13236 1 MTDENIRQIAFYG-------KGGIGKSTTSQNTLAAMAEMGQRILIVGCD 43 (296)
T ss_pred CCCcCceEEEEEC-------CCcCCHHHHHHHHHHHHHHCCCcEEEEEcc
Confidence 3456788777743 36665 45689999999999999999755
No 228
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=36.67 E-value=1.1e+02 Score=32.84 Aligned_cols=48 Identities=13% Similarity=0.062 Sum_probs=37.0
Q ss_pred HHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCC-ceEEeCc--ccccccccc
Q 008154 450 SHRITAGCDILLMPSRFEPCGLNQLYAMRYGT-IPVVHAT--GGLRDTVEN 497 (576)
Q Consensus 450 ~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~-pvIat~~--gg~~e~i~~ 497 (576)
....++.+..++.|+=+++..-.+.||+..|| |||-++. ..|.+.++-
T Consensus 337 y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~ 387 (464)
T KOG1021|consen 337 YMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDW 387 (464)
T ss_pred HHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCccc
Confidence 44689999999999999988889999999987 5555653 344455444
No 229
>PLN00016 RNA-binding protein; Provisional
Probab=36.59 E-value=33 Score=35.51 Aligned_cols=40 Identities=20% Similarity=0.268 Sum_probs=30.6
Q ss_pred CCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 63 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 63 ~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
..+++|+.++.. +||.|..=..+++.|.+.||+|++++..
T Consensus 50 ~~~~~VLVt~~~------~GatG~iG~~lv~~L~~~G~~V~~l~R~ 89 (378)
T PLN00016 50 VEKKKVLIVNTN------SGGHAFIGFYLAKELVKAGHEVTLFTRG 89 (378)
T ss_pred cccceEEEEecc------CCCceeEhHHHHHHHHHCCCEEEEEecC
Confidence 345678877542 5677777788899999999999999754
No 230
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=35.74 E-value=3.7e+02 Score=25.13 Aligned_cols=106 Identities=8% Similarity=-0.007 Sum_probs=60.3
Q ss_pred EEEeccccc--ccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHH---Hh-cCceEEEccCChhHHHHHHhcCC
Q 008154 385 IGFIGRLDY--QKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEA---TY-KDKYRGWVGFNVPISHRITAGCD 458 (576)
Q Consensus 385 i~~~Gr~~~--~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~ll~~~D 458 (576)
++..|-..+ .-+.+.+.+.+.++.+++.++.++..+....++..+...+ .+ ...+..+...+.+...+.+..||
T Consensus 3 ~~igg~~~~~~~~~~~~l~~~l~~~~~~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~~~~~~~~~l~~ad 82 (212)
T cd03146 3 LLTSGGGLGYLAHALPAIDDLLLSLTKARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLFDTEDPLDALLEAD 82 (212)
T ss_pred EEEeCCcccccccchHHHHHHHHHhccCCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEeccCcccHHHHHhcCC
Confidence 444444443 3355666666666655678899998875434444444433 33 33333333222333346789999
Q ss_pred EEEeCCC--------CC--CCcHHHHHHHHcCCceEEeCccc
Q 008154 459 ILLMPSR--------FE--PCGLNQLYAMRYGTIPVVHATGG 490 (576)
Q Consensus 459 v~v~ps~--------~E--~~g~s~lEAma~G~pvIat~~gg 490 (576)
++++|-= +. ++--.+-++...|+|++.+..|.
T Consensus 83 ~I~l~GG~~~~~~~~l~~~~l~~~l~~~~~~g~~i~G~SAGa 124 (212)
T cd03146 83 VIYVGGGNTFNLLAQWREHGLDAILKAALERGVVYIGWSAGS 124 (212)
T ss_pred EEEECCchHHHHHHHHHHcCHHHHHHHHHHCCCEEEEECHhH
Confidence 9999852 11 22223345566899999887663
No 231
>PRK03692 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional
Probab=34.61 E-value=2.1e+02 Score=27.60 Aligned_cols=99 Identities=12% Similarity=0.127 Sum_probs=62.8
Q ss_pred cCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEE-EccC-ChhHHHHHH-----hcCCEEEe---CC
Q 008154 395 KGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRG-WVGF-NVPISHRIT-----AGCDILLM---PS 464 (576)
Q Consensus 395 Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~ll-----~~~Dv~v~---ps 464 (576)
-|.|++.+.++...+.+.++.++|..+...++..+.+++.++.++++ ..|| +.+....++ +++|+++. .+
T Consensus 89 ~G~dl~~~ll~~~~~~~~~v~llG~~~~v~~~a~~~l~~~y~l~i~g~~~Gyf~~~e~~~i~~~I~~s~~dil~VglG~P 168 (243)
T PRK03692 89 AGADLWEALMARAGKEGTPVFLVGGKPEVLAQTEAKLRTQWNVNIVGSQDGYFTPEQRQALFERIHASGAKIVTVAMGSP 168 (243)
T ss_pred ChHHHHHHHHHHHHhcCCeEEEECCCHHHHHHHHHHHHHHhCCEEEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEECCCc
Confidence 38899999888876667899999998766677777777776666665 3344 332222222 58898876 34
Q ss_pred CCCCCcHHHHHHHHcCCceEEeCccccccccc
Q 008154 465 RFEPCGLNQLYAMRYGTIPVVHATGGLRDTVE 496 (576)
Q Consensus 465 ~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~ 496 (576)
..|-|-....+-+ +.+++ -..||.-+.+.
T Consensus 169 kQE~~~~~~~~~~--~~~v~-~gvGg~fD~~a 197 (243)
T PRK03692 169 KQEIFMRDCRLVY--PDALY-MGVGGTYDVFT 197 (243)
T ss_pred HHHHHHHHHHHhC--CCCEE-EEeCeEEEEec
Confidence 5677754433322 44443 34666666554
No 232
>PRK00771 signal recognition particle protein Srp54; Provisional
Probab=34.30 E-value=1.9e+02 Score=30.67 Aligned_cols=98 Identities=17% Similarity=0.063 Sum_probs=62.5
Q ss_pred CCEEEeCCCCC--CCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhh
Q 008154 457 CDILLMPSRFE--PCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYR 534 (576)
Q Consensus 457 ~Dv~v~ps~~E--~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~ 534 (576)
.+-+|++-..| ..|..+-=+...|+|+.-..+|---|-+..|.+.. -...+..-+|...+.+.+.+.+.
T Consensus 234 i~gvIlTKlD~~a~~G~~ls~~~~~~~Pi~fig~Ge~v~Dle~f~~~~------~~~~ilgmgd~~~l~e~~~~~~~--- 304 (437)
T PRK00771 234 IGGIIITKLDGTAKGGGALSAVAETGAPIKFIGTGEKIDDLERFDPDR------FISRLLGMGDLESLLEKVEEALD--- 304 (437)
T ss_pred CCEEEEecccCCCcccHHHHHHHHHCcCEEEEecCCCcccCCcCCHHH------HHHHHhCCCChHHHHHHHHHhhh---
Confidence 45667766654 35555555677899998877775445554433322 23444466788888887777653
Q ss_pred hCHHHHHHHHHHHHhhhCCHHHHHHHHHHHH
Q 008154 535 EHKSSWEGLMRRGMEKDYTWENAAIQYEQVF 565 (576)
Q Consensus 535 ~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y 565 (576)
.+..+++.++....+|+.+.+.+++.++-
T Consensus 305 --~~~~~~~~~~~~~~~f~l~d~~~q~~~~~ 333 (437)
T PRK00771 305 --EEEEEKDVEKMMKGKFTLKDMYKQLEAMN 333 (437)
T ss_pred --HHHHHHHHHHHHcCCcCHHHHHHHHHHHH
Confidence 34445555555566899999888887654
No 233
>PF01297 TroA: Periplasmic solute binding protein family; InterPro: IPR006127 This is a family of ABC transporter metal-binding lipoproteins. An example is the periplasmic zinc-binding protein TroA P96116 from SWISSPROT that interacts with an ATP-binding cassette transport system in Treponema pallidum and plays a role in the transport of zinc across the cytoplasmic membrane. Related proteins are found in both Gram-positive and Gram-negative bacteria. ; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2PS9_A 2PS0_A 2OSV_A 2OGW_A 2PS3_A 2PRS_B 3MFQ_C 3GI1_B 2OV3_A 1PQ4_A ....
Probab=34.18 E-value=64 Score=31.28 Aligned_cols=83 Identities=13% Similarity=0.157 Sum_probs=51.2
Q ss_pred HHHhcCCEEEeCCC-CCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHH
Q 008154 452 RITAGCDILLMPSR-FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAI 530 (576)
Q Consensus 452 ~ll~~~Dv~v~ps~-~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l 530 (576)
.-++.||++|.... +|+|--.+.++.......+.....++...-.+ ....-|+ +|.+...++++|.+.+
T Consensus 43 ~~l~~Adlvv~~G~~~e~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~---------~npH~Wl-dp~~~~~~~~~Ia~~L 112 (256)
T PF01297_consen 43 KKLQKADLVVYNGLGLEPWLEKLLESSQNPKVKVIDLSEGIDLDHHG---------HNPHVWL-DPENAKKMAEAIADAL 112 (256)
T ss_dssp HHHHHSSEEEES-TTTSCCHHHHHHTTTTTTTEEEETTTTS-GSTTC---------BESTGGG-SHHHHHHHHHHHHHHH
T ss_pred HHHHhCCEEEEeCCccchhhhhhhhcccccccceEEeecccccccCC---------CCCchHH-HHHHHHHHHHHHHHHH
Confidence 46799999999875 79996666755556666666555544321111 0234454 6778888888998888
Q ss_pred HHhhhCHHHHHHHHHH
Q 008154 531 RTYREHKSSWEGLMRR 546 (576)
Q Consensus 531 ~~~~~~~~~~~~~~~~ 546 (576)
... +|+......++
T Consensus 113 ~~~--~P~~~~~y~~N 126 (256)
T PF01297_consen 113 SEL--DPANKDYYEKN 126 (256)
T ss_dssp HHH--TGGGHHHHHHH
T ss_pred HHh--CccchHHHHHH
Confidence 754 55444444443
No 234
>PRK04020 rps2P 30S ribosomal protein S2; Provisional
Probab=33.93 E-value=4e+02 Score=24.95 Aligned_cols=100 Identities=16% Similarity=0.046 Sum_probs=53.6
Q ss_pred cccCHHHHHHHHHhhhc-CCcEEEEEeCCChhhHHHHHHHHHHhcCceE---EEccC-ChhHHHHHHhcCCEEEeCCCCC
Q 008154 393 YQKGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATYKDKYR---GWVGF-NVPISHRITAGCDILLMPSRFE 467 (576)
Q Consensus 393 ~~Kg~~~ll~a~~~L~~-~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~ll~~~Dv~v~ps~~E 467 (576)
-.|=+..|..|+.-+.. .+-+++|+|..+ ......+..++.....++ ...|. +.... .-+..=|+++.....
T Consensus 48 L~kT~~~L~~A~~~i~~~~~~~ILfVgTk~-~~~~~v~k~A~~~g~~~v~~RWlgG~LTN~~~-~~~~~Pdliiv~dp~- 124 (204)
T PRK04020 48 VRKTDERIRIAAKFLSRYEPEKILVVSSRQ-YGQKPVQKFAEVVGAKAITGRFIPGTLTNPSL-KGYIEPDVVVVTDPR- 124 (204)
T ss_pred HHHHHHHHHHHHHHHHHhcCCeEEEEeCCH-HHHHHHHHHHHHhCCeeecCccCCCcCcCcch-hccCCCCEEEEECCc-
Confidence 34555666666655544 456788888874 455556666654433222 11221 11111 112233444433321
Q ss_pred CCcHHHHHHHHcCCceEE-eCcccccccc
Q 008154 468 PCGLNQLYAMRYGTIPVV-HATGGLRDTV 495 (576)
Q Consensus 468 ~~g~s~lEAma~G~pvIa-t~~gg~~e~i 495 (576)
.-...+.||...|+|+|+ .|.-.-++.+
T Consensus 125 ~~~~AI~EA~kl~IP~IaivDTn~dp~~V 153 (204)
T PRK04020 125 GDAQAVKEAIEVGIPVVALCDTDNLTSNV 153 (204)
T ss_pred ccHHHHHHHHHhCCCEEEEEeCCCCcccC
Confidence 236789999999999999 4444444444
No 235
>TIGR01281 DPOR_bchL light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein. The BchL peptide (ChlL in chloroplast and cyanobacteria) is an ATP-binding iron-sulfur protein of the dark form protochlorophyllide reductase, an enzyme similar to nitrogenase. This subunit resembles the nitrogenase NifH subunit.
Probab=33.81 E-value=48 Score=32.35 Aligned_cols=35 Identities=29% Similarity=0.498 Sum_probs=27.1
Q ss_pred ceEEEEeeccCCccccCcHH--HHHhhHHHHHHhCCCcEEEEEec
Q 008154 66 YNIVFVTAEAAPYSKTGGLG--DVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~--~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
|+|++. . -||+| +.+..+|.+|+++|++|.+|=.+
T Consensus 1 ~~i~~~-g-------KGGVGKTT~~~nLA~~La~~g~rVLliD~D 37 (268)
T TIGR01281 1 MILAVY-G-------KGGIGKSTTSSNLSVAFAKLGKRVLQIGCD 37 (268)
T ss_pred CEEEEE-c-------CCcCcHHHHHHHHHHHHHhCCCeEEEEecC
Confidence 567766 2 26665 56788999999999999999665
No 236
>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E.coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.
Probab=33.79 E-value=4.8e+02 Score=25.80 Aligned_cols=154 Identities=16% Similarity=0.031 Sum_probs=74.5
Q ss_pred HHHHHHcCCCCCCCCCEE---EEecccccccCHHHHHHHHHhhhc-CCcEEEEEeCCChhhHHHHHHHHHH---------
Q 008154 368 IALQKELGLPIRPDCPLI---GFIGRLDYQKGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEAT--------- 434 (576)
Q Consensus 368 ~~~~~~~~i~~~~~~~~i---~~~Gr~~~~Kg~~~ll~a~~~L~~-~~~~lii~G~g~~~~~~~~~~~~~~--------- 434 (576)
...|..+... ..++.. .++||....||+..+++.-+...+ .+..-++-|-.- -..........
T Consensus 168 ~~~Rstywkd--~se~nmnv~~yigR~Tt~kG~~~mfD~h~~~lK~~~~~t~~~Gier--S~A~~~i~d~~~~~~y~~~~ 243 (355)
T PF11440_consen 168 NKYRSTYWKD--VSEKNMNVNRYIGRQTTWKGPRRMFDLHEKILKPAGFKTIMEGIER--SPAKISIKDHGIPYEYYPKL 243 (355)
T ss_dssp HHHHHHH-----GGGSEEEEEEEE--SSGGG-HHHHHHHHHHTTTTTT-EEEEE---S--STHHHHHHHTT--EEEE-CT
T ss_pred HHHHHHHhhh--hHhhhcccceeeeeeeeecCcHHHhhhHHHhcCCcchhHHhhhhhc--CCceeeeecCCcccccCccc
Confidence 4555555533 344555 899999999999999998877655 577777777432 11222222221
Q ss_pred --------hcCceEEEccCChhHHHHHHhcCCEEEeCCC------CCCCcHHHHHHHHcCCceEE-eCcccccc-ccccc
Q 008154 435 --------YKDKYRGWVGFNVPISHRITAGCDILLMPSR------FEPCGLNQLYAMRYGTIPVV-HATGGLRD-TVENF 498 (576)
Q Consensus 435 --------~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps~------~E~~g~s~lEAma~G~pvIa-t~~gg~~e-~i~~~ 498 (576)
.+.-+-.+..|-.++....++.+-....-|. .+..-++-+|..|||...|- ...|.... .+..
T Consensus 244 ~~~~~~~~pN~~~~v~~~Yi~~E~~~~Maks~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~- 322 (355)
T PF11440_consen 244 DCDEPKPAPNSPVPVYGPYIRSEGLERMAKSLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDG- 322 (355)
T ss_dssp GGGG---SSS--EEEESS--HHHHHHHHHTEEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTS-
T ss_pred cccCcccCCCCcceecchhhhHHHHHHHhhccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecC-
Confidence 1112333455544444456666666655443 24688999999999986665 34443332 1111
Q ss_pred cccccCCCCCcceeEeCCCCHHHHHHHHHHH
Q 008154 499 NPFAREGSGEGTGWSFLPLSEESMLTALRFA 529 (576)
Q Consensus 499 ~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~ 529 (576)
++-++-....+.++..|.++..+.|.++
T Consensus 323 ---~~~~~~~~~~I~~De~dle~T~ekl~E~ 350 (355)
T PF11440_consen 323 ---TRYIDHPYSAIYFDENDLESTVEKLIEV 350 (355)
T ss_dssp ---SBGGSS--S-EEE-TTSHHHHHHHHHHH
T ss_pred ---ceeeccCcceeEeccchHHHHHHHHHHH
Confidence 0000112334556667777766666655
No 237
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=32.51 E-value=67 Score=31.67 Aligned_cols=39 Identities=23% Similarity=0.416 Sum_probs=31.4
Q ss_pred hhccCCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEe
Q 008154 59 KAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 59 ~~~~~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~ 107 (576)
+.....++||++. ||.|-..+.|+..|...||.|+++--
T Consensus 21 ~~~p~~~lrI~it----------GgaGFIgSHLvdkLm~egh~VIa~Dn 59 (350)
T KOG1429|consen 21 QVKPSQNLRILIT----------GGAGFIGSHLVDKLMTEGHEVIALDN 59 (350)
T ss_pred cccCCCCcEEEEe----------cCcchHHHHHHHHHHhcCCeEEEEec
Confidence 3444556888876 88888899999999999999998853
No 238
>PLN03007 UDP-glucosyltransferase family protein
Probab=32.36 E-value=69 Score=34.52 Aligned_cols=35 Identities=11% Similarity=-0.191 Sum_probs=24.7
Q ss_pred HHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCc
Q 008154 452 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT 488 (576)
Q Consensus 452 ~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~ 488 (576)
.+++.+++-++-+. +=-.|.+||+++|+|+|+...
T Consensus 357 ~iL~h~~v~~fvtH--~G~nS~~Eal~~GVP~v~~P~ 391 (482)
T PLN03007 357 LILDHQATGGFVTH--CGWNSLLEGVAAGLPMVTWPV 391 (482)
T ss_pred HHhccCccceeeec--CcchHHHHHHHcCCCeeeccc
Confidence 57888877443332 223589999999999999543
No 239
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=31.93 E-value=2.5e+02 Score=26.72 Aligned_cols=38 Identities=8% Similarity=0.134 Sum_probs=31.1
Q ss_pred CChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeC
Q 008154 445 FNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA 487 (576)
Q Consensus 445 ~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~ 487 (576)
.+......++++||++|-...+ ..+=|+++|+|+|+-.
T Consensus 246 ~~~~~~~~~~~~~~~~Is~RlH-----~~I~a~~~g~P~i~i~ 283 (286)
T PF04230_consen 246 LSPDELLELISQADLVISMRLH-----GAILALSLGVPVIAIS 283 (286)
T ss_pred CCHHHHHHHHhcCCEEEecCCH-----HHHHHHHcCCCEEEEe
Confidence 3566677899999999988775 5677899999999864
No 240
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=31.76 E-value=74 Score=31.17 Aligned_cols=35 Identities=29% Similarity=0.522 Sum_probs=27.0
Q ss_pred CceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 65 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
+++-+.|+. -++|+| ..+|+.|+++|++|++++-.
T Consensus 5 ~~~~~lITG------ASsGIG---~~~A~~lA~~g~~liLvaR~ 39 (265)
T COG0300 5 KGKTALITG------ASSGIG---AELAKQLARRGYNLILVARR 39 (265)
T ss_pred CCcEEEEEC------CCchHH---HHHHHHHHHCCCEEEEEeCc
Confidence 344555653 179999 57899999999999999854
No 241
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=31.64 E-value=58 Score=34.59 Aligned_cols=35 Identities=37% Similarity=0.506 Sum_probs=28.0
Q ss_pred CCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEe
Q 008154 63 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 63 ~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~ 107 (576)
.++|||+.+ ||.|-.=..+++.|.+.|++|+++..
T Consensus 118 ~~~mkILVT----------GatGFIGs~Lv~~Ll~~G~~V~~ldr 152 (436)
T PLN02166 118 RKRLRIVVT----------GGAGFVGSHLVDKLIGRGDEVIVIDN 152 (436)
T ss_pred cCCCEEEEE----------CCccHHHHHHHHHHHHCCCEEEEEeC
Confidence 456887766 66777778899999999999998864
No 242
>COG0003 ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=31.07 E-value=84 Score=31.79 Aligned_cols=37 Identities=38% Similarity=0.646 Sum_probs=29.0
Q ss_pred ceEEEEeeccCCccccCcHHH--HHhhHHHHHHhCCCcEEEEEecC
Q 008154 66 YNIVFVTAEAAPYSKTGGLGD--VCGSLPVALAARGHRVMVVSPRY 109 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~--~~~~la~~l~~~G~~V~vi~~~~ 109 (576)
+||.+|+. -||+|. .+..+|-.+++.|..|.+|+.+-
T Consensus 2 ~riv~f~G-------KGGVGKTT~aaA~A~~lA~~g~kvLlvStDP 40 (322)
T COG0003 2 TRIVFFTG-------KGGVGKTTIAAATAVKLAESGKKVLLVSTDP 40 (322)
T ss_pred cEEEEEec-------CCcccHHHHHHHHHHHHHHcCCcEEEEEeCC
Confidence 67888874 489988 66667788999998888887543
No 243
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=30.87 E-value=2.7e+02 Score=25.17 Aligned_cols=102 Identities=19% Similarity=0.232 Sum_probs=63.1
Q ss_pred cccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhc-CceEEEc-c-CChhHHHHHH-----hcCCEEEeC-
Q 008154 393 YQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYK-DKYRGWV-G-FNVPISHRIT-----AGCDILLMP- 463 (576)
Q Consensus 393 ~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~-~~~~~~~-~-~~~~~~~~ll-----~~~Dv~v~p- 463 (576)
..-|.+++.+.+....+++.++.++|..++..++..+.+.+.++ .++++.. + ++++....++ ++.|+++.-
T Consensus 30 rv~g~dl~~~l~~~~~~~~~~ifllG~~~~~~~~~~~~l~~~yP~l~ivg~~~g~f~~~~~~~i~~~I~~~~pdiv~vgl 109 (172)
T PF03808_consen 30 RVTGSDLFPDLLRRAEQRGKRIFLLGGSEEVLEKAAANLRRRYPGLRIVGYHHGYFDEEEEEAIINRINASGPDIVFVGL 109 (172)
T ss_pred ccCHHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHHCCCeEEEEecCCCCChhhHHHHHHHHHHcCCCEEEEEC
Confidence 34588888888888877788999999987667777777877764 4555433 3 2333333343 588888763
Q ss_pred --CCCCCCcHHHHHHHHcCCceEEeCcccccccccc
Q 008154 464 --SRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVEN 497 (576)
Q Consensus 464 --s~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~ 497 (576)
+..|-|-......+- ..+.-..|+.-+.+..
T Consensus 110 G~PkQE~~~~~~~~~l~---~~v~i~vG~~~d~~aG 142 (172)
T PF03808_consen 110 GAPKQERWIARHRQRLP---AGVIIGVGGAFDFLAG 142 (172)
T ss_pred CCCHHHHHHHHHHHHCC---CCEEEEECchhhhhcc
Confidence 234544433333222 2255556666666543
No 244
>CHL00194 ycf39 Ycf39; Provisional
Probab=29.93 E-value=63 Score=32.45 Aligned_cols=27 Identities=15% Similarity=0.196 Sum_probs=20.8
Q ss_pred CcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 82 GGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 82 GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
||.|..=..+++.|.+.||+|++++-.
T Consensus 7 GatG~iG~~lv~~Ll~~g~~V~~l~R~ 33 (317)
T CHL00194 7 GATGTLGRQIVRQALDEGYQVRCLVRN 33 (317)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEEEcC
Confidence 555555567888899999999998743
No 245
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=29.65 E-value=1.7e+02 Score=24.05 Aligned_cols=36 Identities=14% Similarity=0.128 Sum_probs=28.2
Q ss_pred HHHh--cCCEEEeCCCCCCCcHHHHHHHHcCCceEEeC
Q 008154 452 RITA--GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA 487 (576)
Q Consensus 452 ~ll~--~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~ 487 (576)
+++. ..|+++..+..+.-.-...+++..|++|++..
T Consensus 56 ~ll~~~~~D~V~I~tp~~~h~~~~~~~l~~g~~v~~EK 93 (120)
T PF01408_consen 56 ELLADEDVDAVIIATPPSSHAEIAKKALEAGKHVLVEK 93 (120)
T ss_dssp HHHHHTTESEEEEESSGGGHHHHHHHHHHTTSEEEEES
T ss_pred HHHHhhcCCEEEEecCCcchHHHHHHHHHcCCEEEEEc
Confidence 4555 79999888876666677889999999888654
No 246
>PF00185 OTCace: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; InterPro: IPR006131 This family contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and is described by IPR006132 from INTERPRO. The carboxyl-terminal, aspartate/ornithine-binding domain is connected to the amino-terminal domain by two alpha-helices, which comprise a hinge between domains [].; GO: 0016597 amino acid binding, 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 4EP1_B 3Q98_A 3E2P_A 2RGW_E 4EKN_B 2G7M_E 3D6N_B 3M4J_A 3L06_A ....
Probab=29.62 E-value=69 Score=28.59 Aligned_cols=35 Identities=31% Similarity=0.455 Sum_probs=28.4
Q ss_pred CceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 65 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
++||+++.. +-++++..++..++..|..|.+++|.
T Consensus 2 gl~i~~vGD---------~~~rv~~Sl~~~~~~~g~~~~~~~P~ 36 (158)
T PF00185_consen 2 GLKIAYVGD---------GHNRVAHSLIELLAKFGMEVVLIAPE 36 (158)
T ss_dssp TEEEEEESS---------TTSHHHHHHHHHHHHTTSEEEEESSG
T ss_pred CCEEEEECC---------CCChHHHHHHHHHHHcCCEEEEECCC
Confidence 467888731 34688999999999999999999876
No 247
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=28.79 E-value=77 Score=28.31 Aligned_cols=31 Identities=32% Similarity=0.507 Sum_probs=23.4
Q ss_pred CceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEE
Q 008154 65 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 106 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~ 106 (576)
+|+|.++ |+|.+=..+++.|.+.||+|.++-
T Consensus 1 m~~Ig~I-----------GlG~mG~~~a~~L~~~g~~v~~~d 31 (163)
T PF03446_consen 1 MMKIGFI-----------GLGNMGSAMARNLAKAGYEVTVYD 31 (163)
T ss_dssp -BEEEEE-------------SHHHHHHHHHHHHTTTEEEEEE
T ss_pred CCEEEEE-----------chHHHHHHHHHHHHhcCCeEEeec
Confidence 3677777 456777889999999999999874
No 248
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=28.54 E-value=35 Score=29.25 Aligned_cols=34 Identities=32% Similarity=0.362 Sum_probs=24.1
Q ss_pred CCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEe
Q 008154 63 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 63 ~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~ 107 (576)
...|||.++. .|++-..|+++|.+.||+|..+..
T Consensus 8 ~~~l~I~iIG-----------aGrVG~~La~aL~~ag~~v~~v~s 41 (127)
T PF10727_consen 8 AARLKIGIIG-----------AGRVGTALARALARAGHEVVGVYS 41 (127)
T ss_dssp ----EEEEEC-----------TSCCCCHHHHHHHHTTSEEEEESS
T ss_pred CCccEEEEEC-----------CCHHHHHHHHHHHHCCCeEEEEEe
Confidence 3568999994 344558899999999999988853
No 249
>TIGR01007 eps_fam capsular exopolysaccharide family. This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes.
Probab=28.46 E-value=1.1e+02 Score=28.35 Aligned_cols=40 Identities=18% Similarity=0.411 Sum_probs=28.7
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecC
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY 109 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~ 109 (576)
||+..|+.. -+ .-|-.+.+..+|.+|++.|++|.+|-.+.
T Consensus 17 ~kvI~v~s~-kg---G~GKTt~a~~LA~~la~~G~rVllID~D~ 56 (204)
T TIGR01007 17 IKVLLITSV-KP---GEGKSTTSANIAVAFAQAGYKTLLIDGDM 56 (204)
T ss_pred CcEEEEecC-CC---CCCHHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 565555432 11 24567789999999999999999996553
No 250
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=28.22 E-value=52 Score=30.26 Aligned_cols=31 Identities=35% Similarity=0.439 Sum_probs=20.9
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~ 107 (576)
|||+.+.. |.+=.-+|..|++.||+|+.+-.
T Consensus 1 M~I~ViGl-----------GyvGl~~A~~lA~~G~~V~g~D~ 31 (185)
T PF03721_consen 1 MKIAVIGL-----------GYVGLPLAAALAEKGHQVIGVDI 31 (185)
T ss_dssp -EEEEE-------------STTHHHHHHHHHHTTSEEEEE-S
T ss_pred CEEEEECC-----------CcchHHHHHHHHhCCCEEEEEeC
Confidence 67877754 33335688999999999999843
No 251
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=27.87 E-value=86 Score=31.43 Aligned_cols=34 Identities=32% Similarity=0.332 Sum_probs=25.9
Q ss_pred CCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 64 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 64 ~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
.+|||+++. .|..-..+++.|++.||+|.++...
T Consensus 3 ~~m~I~iiG-----------~G~~G~~lA~~l~~~G~~V~~~~r~ 36 (308)
T PRK14619 3 QPKTIAILG-----------AGAWGSTLAGLASANGHRVRVWSRR 36 (308)
T ss_pred CCCEEEEEC-----------ccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 458888883 4455577889999999999988643
No 252
>TIGR03012 sulf_tusD_dsrE sulfur relay protein TusD/DsrE. The three proteins TusB, TusC, and TusD form a heterohexamer responsible for a sulfur relay reaction. In large numbers of proteobacterial species, this complex acts on a Cys-derived persulfide moiety, delivered by the cysteine desulfurase IscS to TusA, then to TusBCD. The activated sulfur group is then transferred to TusE (DsrC), then by MnmA (TrmU) for modification of an anticodon nucleotide in tRNAs for Glu, Lys, and Gln. The sulfur relay complex TusBCD is also found, under the designation DsrEFH, in phototrophic and chemotrophic sulfur bacteria, such as Chromatium vinosum. In these organisms, it seems the primary purpose is related to sulfur flux, such as oxidation from sulfide to molecular sulfur to sulfate.
Probab=27.87 E-value=1.2e+02 Score=25.92 Aligned_cols=35 Identities=23% Similarity=0.381 Sum_probs=25.9
Q ss_pred EEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcE-EEE
Q 008154 68 IVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRV-MVV 105 (576)
Q Consensus 68 I~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V-~vi 105 (576)
++++... .|+ .+-.++.+.++|+++.+.||+| .++
T Consensus 2 ~~iv~~~-~P~--~~~~~~~al~~A~aa~~~gh~v~~vF 37 (127)
T TIGR03012 2 YTLLVTG-PPY--GTQAASSAYQFAQALLAKGHEIVRVF 37 (127)
T ss_pred EEEEEeC-CCC--CcHHHHHHHHHHHHHHHCCCcEEEEE
Confidence 4555444 463 5668889999999999999995 554
No 253
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=27.76 E-value=82 Score=30.48 Aligned_cols=38 Identities=26% Similarity=0.345 Sum_probs=26.8
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCC
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFN 111 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~ 111 (576)
|||+..+....- +-| +..|+++|++.| +|+|++|...+
T Consensus 1 M~ILltNDDGi~---a~G----i~aL~~~l~~~g-~V~VvAP~~~~ 38 (244)
T TIGR00087 1 MKILLTNDDGIH---SPG----IRALYQALKELG-EVTVVAPARQR 38 (244)
T ss_pred CeEEEECCCCCC---CHh----HHHHHHHHHhCC-CEEEEeCCCCc
Confidence 788877655221 223 566778888888 89999998655
No 254
>PF09198 T4-Gluco-transf: Bacteriophage T4 beta-glucosyltransferase; InterPro: IPR015281 Members of this family are DNA-modifying enzymes encoded by bacteriophage T4 that transfer glucose from uridine diphosphoglucose to 5-hydroxymethyl cytosine bases of phage T4 DNA []. ; PDB: 1J39_A 1SXQ_B 1NZF_A 1M5R_B 1JEJ_A 1JIV_A 1NZD_A 1NVK_A 2BGU_A 1JIU_A ....
Probab=27.66 E-value=1.6e+02 Score=18.49 Aligned_cols=36 Identities=11% Similarity=0.049 Sum_probs=19.5
Q ss_pred ceEEEEeec--cCCccccCcHHHHHhhHHHHHHhCCCcEE
Q 008154 66 YNIVFVTAE--AAPYSKTGGLGDVCGSLPVALAARGHRVM 103 (576)
Q Consensus 66 mkI~~~s~e--~~P~~~~GG~~~~~~~la~~l~~~G~~V~ 103 (576)
|||+++... ...+ -.--..-...+.+.++++|.+|.
T Consensus 1 mkiai~n~gnni~~f--kt~p~setiyl~~~~~~mgl~vd 38 (38)
T PF09198_consen 1 MKIAIINMGNNIQNF--KTTPSSETIYLFKCISDMGLNVD 38 (38)
T ss_dssp -EEEEEESSS--SSS--SSHHHHHHHHHHHHHHTTT-EEE
T ss_pred CeEEEEecCCceece--eecCccceEeHHHHHHHhCCCCC
Confidence 688888764 1111 01112234567788999998874
No 255
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=27.50 E-value=3.1e+02 Score=24.75 Aligned_cols=59 Identities=19% Similarity=0.179 Sum_probs=36.1
Q ss_pred EEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEcc
Q 008154 386 GFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVG 444 (576)
Q Consensus 386 ~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~ 444 (576)
-.+|....+-+.+..-+.++.+.+.+..++++|-|.|.-+.+.......++..+..-.|
T Consensus 76 ~ivg~~~g~f~~~~~~~i~~~I~~~~pdiv~vglG~PkQE~~~~~~~~~l~~~v~i~vG 134 (172)
T PF03808_consen 76 RIVGYHHGYFDEEEEEAIINRINASGPDIVFVGLGAPKQERWIARHRQRLPAGVIIGVG 134 (172)
T ss_pred EEEEecCCCCChhhHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEC
Confidence 33444443334333344444444457789999999887788888888877766544443
No 256
>PLN02778 3,5-epimerase/4-reductase
Probab=27.50 E-value=75 Score=31.66 Aligned_cols=35 Identities=14% Similarity=0.122 Sum_probs=25.6
Q ss_pred ccCCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEE
Q 008154 61 QTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVV 105 (576)
Q Consensus 61 ~~~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi 105 (576)
+.+..|||+.+ ||.|..=..+++.|.++||+|++.
T Consensus 5 ~~~~~~kiLVt----------G~tGfiG~~l~~~L~~~g~~V~~~ 39 (298)
T PLN02778 5 AGSATLKFLIY----------GKTGWIGGLLGKLCQEQGIDFHYG 39 (298)
T ss_pred CCCCCCeEEEE----------CCCCHHHHHHHHHHHhCCCEEEEe
Confidence 34456888876 555555577889999999998753
No 257
>PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed
Probab=27.39 E-value=1.3e+02 Score=28.07 Aligned_cols=28 Identities=18% Similarity=0.033 Sum_probs=23.6
Q ss_pred cCcHHHHH--hhHHHHHHhCCCcEEEEEec
Q 008154 81 TGGLGDVC--GSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 81 ~GG~~~~~--~~la~~l~~~G~~V~vi~~~ 108 (576)
+||++.+- .++++.|.+.|++|.+|...
T Consensus 13 TGsiaa~k~a~~lir~L~k~G~~V~vv~T~ 42 (196)
T PRK08305 13 TGSHCTYDEVMPEIEKLVDEGAEVTPIVSY 42 (196)
T ss_pred cCHHHHHHHHHHHHHHHHhCcCEEEEEECH
Confidence 57777774 79999999999999998743
No 258
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=26.30 E-value=53 Score=31.31 Aligned_cols=26 Identities=31% Similarity=0.486 Sum_probs=23.0
Q ss_pred CcHHHHHhhHHHHHHhCCCcEEEEEe
Q 008154 82 GGLGDVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 82 GG~~~~~~~la~~l~~~G~~V~vi~~ 107 (576)
-|.|.+=..+|+.|++.||+|++|-.
T Consensus 6 iG~G~vG~~va~~L~~~g~~Vv~Id~ 31 (225)
T COG0569 6 IGAGRVGRSVARELSEEGHNVVLIDR 31 (225)
T ss_pred ECCcHHHHHHHHHHHhCCCceEEEEc
Confidence 46788889999999999999999953
No 259
>CHL00175 minD septum-site determining protein; Validated
Probab=26.06 E-value=1.7e+02 Score=28.78 Aligned_cols=46 Identities=17% Similarity=0.213 Sum_probs=30.4
Q ss_pred ccCCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCC
Q 008154 61 QTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYF 110 (576)
Q Consensus 61 ~~~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~ 110 (576)
..++++||..|+..- + .-|-.+.+..+|.+|++.|.+|.+|-.+.+
T Consensus 10 ~~~~~~~vi~v~s~K-G---GvGKTt~a~nLA~~La~~g~~vlliD~D~~ 55 (281)
T CHL00175 10 KSATMSRIIVITSGK-G---GVGKTTTTANLGMSIARLGYRVALIDADIG 55 (281)
T ss_pred hcCCCceEEEEEcCC-C---CCcHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 333444555554421 1 234557789999999999999999966543
No 260
>PLN02208 glycosyltransferase family protein
Probab=25.97 E-value=1.1e+02 Score=32.59 Aligned_cols=68 Identities=13% Similarity=0.014 Sum_probs=41.8
Q ss_pred HHHhcCCEEEeCCCCCCCc-HHHHHHHHcCCceEEeCcc----ccccccccccccccCCCCCcceeEeCC-----CCHHH
Q 008154 452 RITAGCDILLMPSRFEPCG-LNQLYAMRYGTIPVVHATG----GLRDTVENFNPFAREGSGEGTGWSFLP-----LSEES 521 (576)
Q Consensus 452 ~ll~~~Dv~v~ps~~E~~g-~s~lEAma~G~pvIat~~g----g~~e~i~~~~~~~~~~~~~~~G~~~~~-----~d~~~ 521 (576)
.+++...+.++-+ .|| .+.+||+++|+|+|+-..- .....+.+ .-+.|..+.. -+.++
T Consensus 323 ~iL~H~~v~~Fvt---HcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~---------~~g~gv~~~~~~~~~~~~~~ 390 (442)
T PLN02208 323 LILDHPSIGCFVN---HCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTE---------EFEVSVEVSREKTGWFSKES 390 (442)
T ss_pred HHhcCCccCeEEc---cCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHH---------HhceeEEeccccCCcCcHHH
Confidence 4788777755544 344 6789999999999985432 12222111 0244555532 25678
Q ss_pred HHHHHHHHHH
Q 008154 522 MLTALRFAIR 531 (576)
Q Consensus 522 la~~i~~~l~ 531 (576)
+.++|.+++.
T Consensus 391 l~~ai~~~m~ 400 (442)
T PLN02208 391 LSNAIKSVMD 400 (442)
T ss_pred HHHHHHHHhc
Confidence 8888888874
No 261
>COG0803 LraI ABC-type metal ion transport system, periplasmic component/surface adhesin [Inorganic ion transport and metabolism]
Probab=25.81 E-value=2.3e+02 Score=28.42 Aligned_cols=90 Identities=10% Similarity=-0.012 Sum_probs=52.1
Q ss_pred HHHhcCCEEEeCCC-CCCCcHHHHHHHHcCC-ceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHH
Q 008154 452 RITAGCDILLMPSR-FEPCGLNQLYAMRYGT-IPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFA 529 (576)
Q Consensus 452 ~ll~~~Dv~v~ps~-~E~~g~s~lEAma~G~-pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~ 529 (576)
.-++.+|+++.... +|+|-..+++.+.... ++|....|--.-.+.+ .. +..........+|.+...+++.|.+.
T Consensus 77 ~~i~~ADliv~nG~~le~w~~k~~~~~~~~~~~~i~~s~~i~~~~~~~--~~--~~g~~dpH~Wldp~na~~~v~~I~~~ 152 (303)
T COG0803 77 AKLRKADLIVYNGLGLEPWLEKLLESADKKKVLVIEVSDGIELLPLPG--EE--EEGVNDPHVWLDPKNAKIYAENIADA 152 (303)
T ss_pred HHHHhCCEEEEcCCChHHHHHHHHHhcccCCceEEEccCCccccCCCC--cc--ccCCCCCCeecCHHHHHHHHHHHHHH
Confidence 46899999999888 7888888887776654 2333222211111111 00 00001233444777888899999988
Q ss_pred HHHhhhCHHHHHHHHHHH
Q 008154 530 IRTYREHKSSWEGLMRRG 547 (576)
Q Consensus 530 l~~~~~~~~~~~~~~~~a 547 (576)
+... +|+......+++
T Consensus 153 L~~~--dP~~~~~y~~N~ 168 (303)
T COG0803 153 LVEL--DPENKETYEKNA 168 (303)
T ss_pred HHHh--CcccHHHHHHHH
Confidence 8744 665555554443
No 262
>PRK02122 glucosamine-6-phosphate deaminase-like protein; Validated
Probab=25.58 E-value=2.5e+02 Score=31.53 Aligned_cols=42 Identities=17% Similarity=0.114 Sum_probs=29.8
Q ss_pred cCCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecC
Q 008154 62 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY 109 (576)
Q Consensus 62 ~~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~ 109 (576)
...++||+.|++ +|+ -..+.++-....|.++||+|+|+....
T Consensus 366 ~~~~~rvLv~sp--HPD----Devi~~GGTlarl~~~G~~V~vv~~Ts 407 (652)
T PRK02122 366 LPYPKRVIIFSP--HPD----DDVISMGGTFRRLVEQGHDVHVAYQTS 407 (652)
T ss_pred ccCCceEEEEEe--CCC----chHhhhHHHHHHHHHCCCcEEEEEecC
Confidence 344689999997 574 244445555577889999999997653
No 263
>PLN02206 UDP-glucuronate decarboxylase
Probab=25.02 E-value=90 Score=33.19 Aligned_cols=35 Identities=40% Similarity=0.517 Sum_probs=27.3
Q ss_pred CCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEe
Q 008154 63 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 63 ~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~ 107 (576)
.+.|||+.. ||.|-.=..+++.|.+.|++|+++..
T Consensus 117 ~~~~kILVT----------GatGfIGs~Lv~~Ll~~G~~V~~ld~ 151 (442)
T PLN02206 117 RKGLRVVVT----------GGAGFVGSHLVDRLMARGDSVIVVDN 151 (442)
T ss_pred cCCCEEEEE----------CcccHHHHHHHHHHHHCcCEEEEEeC
Confidence 356887765 66666667889999999999998753
No 264
>COG1763 MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]
Probab=24.98 E-value=1.3e+02 Score=27.05 Aligned_cols=39 Identities=28% Similarity=0.278 Sum_probs=32.3
Q ss_pred CceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 65 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
+|+|+-|+.. .-+|=.+++..+.+.|.++|+.|.+|--.
T Consensus 1 m~~Il~ivG~-----k~SGKTTLie~lv~~L~~~G~rVa~iKH~ 39 (161)
T COG1763 1 MMKILGIVGY-----KNSGKTTLIEKLVRKLKARGYRVATVKHA 39 (161)
T ss_pred CCcEEEEEec-----CCCChhhHHHHHHHHHHhCCcEEEEEEec
Confidence 4778888763 35889999999999999999999999643
No 265
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=24.97 E-value=1.1e+02 Score=30.18 Aligned_cols=39 Identities=13% Similarity=0.094 Sum_probs=31.1
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEE
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 106 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~ 106 (576)
|||+++|....- ..+|--+....||++|.++|..+..++
T Consensus 1 M~V~i~~Dgg~~--iGmGHV~R~l~LA~~l~k~~~~~~fl~ 39 (318)
T COG3980 1 MKVLIRCDGGLE--IGMGHVMRTLTLARELEKRGFACLFLT 39 (318)
T ss_pred CcEEEEecCCcc--cCcchhhhHHHHHHHHHhcCceEEEec
Confidence 899999987543 356777778889999999997777775
No 266
>PRK00211 sulfur relay protein TusC; Validated
Probab=24.90 E-value=1.4e+02 Score=25.23 Aligned_cols=38 Identities=24% Similarity=0.117 Sum_probs=29.4
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEE
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 106 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~ 106 (576)
+||+++... .|+ .+-.++-..+++-++++.+++|.++-
T Consensus 2 ~ki~~i~~~-~Py--g~~~~~eaLd~ala~~a~~~~v~vff 39 (119)
T PRK00211 2 KRIAFVFRQ-APH--GTASGREGLDALLATSAFTEDIGVFF 39 (119)
T ss_pred ceEEEEecC-CCC--CCHHHHHHHHHHHHHhcccCCeeEEE
Confidence 568888876 573 34377778888999999999998885
No 267
>PRK13933 stationary phase survival protein SurE; Provisional
Probab=24.79 E-value=1.1e+02 Score=29.89 Aligned_cols=38 Identities=24% Similarity=0.408 Sum_probs=26.4
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCC
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFN 111 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~ 111 (576)
|||+..+..-.. +-| +..|+++|++ +++|+|++|.-.+
T Consensus 1 M~ILvtNDDGi~---apG----l~aL~~~l~~-~~~V~VvAP~~~~ 38 (253)
T PRK13933 1 MNILLTNDDGIN---AEG----INTLAELLSK-YHEVIIVAPENQR 38 (253)
T ss_pred CeEEEEcCCCCC---Chh----HHHHHHHHHh-CCcEEEEccCCCC
Confidence 788888776432 344 4556677765 5799999998655
No 268
>COG1922 WecG Teichoic acid biosynthesis proteins [Cell envelope biogenesis, outer membrane]
Probab=24.62 E-value=4.1e+02 Score=25.79 Aligned_cols=102 Identities=23% Similarity=0.231 Sum_probs=61.1
Q ss_pred cccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhc-CceEEEc-cC-ChhHHHHHH-----hcCCEEEeC-
Q 008154 393 YQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYK-DKYRGWV-GF-NVPISHRIT-----AGCDILLMP- 463 (576)
Q Consensus 393 ~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~-~~~~~~~-~~-~~~~~~~ll-----~~~Dv~v~p- 463 (576)
+--|.|++...+++..+++.++-+.|..+.-.++..+.+++..+ .++++.. || +.++...++ .++|+++.-
T Consensus 90 rv~G~Dl~~~Ll~~a~~~~~~vfllGgkp~V~~~a~~~l~~~~p~l~ivg~h~GYf~~~e~~~i~~~I~~s~pdil~Vgm 169 (253)
T COG1922 90 RVAGTDLVEALLKRAAEEGKRVFLLGGKPGVAEQAAAKLRAKYPGLKIVGSHDGYFDPEEEEAIVERIAASGPDILLVGM 169 (253)
T ss_pred cCChHHHHHHHHHHhCccCceEEEecCCHHHHHHHHHHHHHHCCCceEEEecCCCCChhhHHHHHHHHHhcCCCEEEEeC
Confidence 34588888888888766778899999887666777777777776 5666655 55 333222333 478887753
Q ss_pred --CCCCCCcHHHHHHHHcCCceEEeCcccccccccc
Q 008154 464 --SRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVEN 497 (576)
Q Consensus 464 --s~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~ 497 (576)
++.|-|=..-.+ .+. +.|+..+||.-|+...
T Consensus 170 G~P~QE~wi~~~~~--~~~-~~v~igVGg~fDv~sG 202 (253)
T COG1922 170 GVPRQEIWIARNRQ--QLP-VAVAIGVGGSFDVFSG 202 (253)
T ss_pred CCchhHHHHHHhHH--hcC-CceEEeccceEEEecC
Confidence 233433222221 122 3445556666666543
No 269
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=24.53 E-value=2.2e+02 Score=25.66 Aligned_cols=73 Identities=12% Similarity=0.201 Sum_probs=0.0
Q ss_pred hHHHHHHhcCCEEEeCCC--CC----CCcHHHHHHHHcCCceEEeCccc----cccccccccccccCCCCCcceeE-eCC
Q 008154 448 PISHRITAGCDILLMPSR--FE----PCGLNQLYAMRYGTIPVVHATGG----LRDTVENFNPFAREGSGEGTGWS-FLP 516 (576)
Q Consensus 448 ~~~~~ll~~~Dv~v~ps~--~E----~~g~s~lEAma~G~pvIat~~gg----~~e~i~~~~~~~~~~~~~~~G~~-~~~ 516 (576)
+..+..+..+|+.+.--. .| .|.-.+-|+|-+++|+|+|-.-- +-+-+.. ...-+. +++
T Consensus 92 ~al~rA~~~aDvIIIDEIGpMElks~~f~~~ve~vl~~~kpliatlHrrsr~P~v~~ik~----------~~~v~v~lt~ 161 (179)
T COG1618 92 PALRRALEEADVIIIDEIGPMELKSKKFREAVEEVLKSGKPLIATLHRRSRHPLVQRIKK----------LGGVYVFLTP 161 (179)
T ss_pred HHHHHHhhcCCEEEEecccchhhccHHHHHHHHHHhcCCCcEEEEEecccCChHHHHhhh----------cCCEEEEEcc
Q ss_pred CCHHHHHHHHHHHH
Q 008154 517 LSEESMLTALRFAI 530 (576)
Q Consensus 517 ~d~~~la~~i~~~l 530 (576)
.|-+.+...|...|
T Consensus 162 ~NR~~i~~~Il~~L 175 (179)
T COG1618 162 ENRNRILNEILSVL 175 (179)
T ss_pred chhhHHHHHHHHHh
No 270
>COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]
Probab=24.23 E-value=7.4e+02 Score=26.51 Aligned_cols=110 Identities=13% Similarity=0.168 Sum_probs=67.4
Q ss_pred EEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhc--CCEEEeCCCC-CCCcHHHHHHHHc---CCceEE-
Q 008154 413 QFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAG--CDILLMPSRF-EPCGLNQLYAMRY---GTIPVV- 485 (576)
Q Consensus 413 ~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~--~Dv~v~ps~~-E~~g~s~lEAma~---G~pvIa- 485 (576)
++.++-+. +......+.+-+...-.+.... +...+...+.. .|+++.=-+. +.-|+.+++.+.. +.|||.
T Consensus 6 ~iLvVDDd-~~ir~~l~~~L~~~G~~v~~a~--~~~~al~~i~~~~~~lvl~Di~mp~~~Gl~ll~~i~~~~~~~pVI~~ 82 (464)
T COG2204 6 RILVVDDD-PDIRELLEQALELAGYEVVTAE--SAEEALEALSESPFDLVLLDIRMPGMDGLELLKEIKSRDPDLPVIVM 82 (464)
T ss_pred CEEEEeCC-HHHHHHHHHHHHHcCCeEEEeC--CHHHHHHHHhcCCCCEEEEecCCCCCchHHHHHHHHhhCCCCCEEEE
Confidence 34555554 3333333333333333444443 33333344443 4666654443 6778888887666 789988
Q ss_pred eCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHH
Q 008154 486 HATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRT 532 (576)
Q Consensus 486 t~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~ 532 (576)
|..|.+...+... ..|..-|+..|-+++.+...+++++..
T Consensus 83 Tg~g~i~~AV~A~-------k~GA~Dfl~KP~~~~~L~~~v~ral~~ 122 (464)
T COG2204 83 TGHGDIDTAVEAL-------RLGAFDFLEKPFDLDRLLAIVERALEL 122 (464)
T ss_pred eCCCCHHHHHHHH-------hcCcceeeeCCCCHHHHHHHHHHHHHH
Confidence 6777766555441 127778888999999999999999873
No 271
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=24.09 E-value=62 Score=28.85 Aligned_cols=26 Identities=31% Similarity=0.317 Sum_probs=21.6
Q ss_pred HHHHHhhHHHHHHhCCCcEEEEEecC
Q 008154 84 LGDVCGSLPVALAARGHRVMVVSPRY 109 (576)
Q Consensus 84 ~~~~~~~la~~l~~~G~~V~vi~~~~ 109 (576)
-|.+....++.|.+.|++|+||.|..
T Consensus 21 GG~va~rka~~Ll~~ga~V~VIsp~~ 46 (157)
T PRK06719 21 GGKIAYRKASGLKDTGAFVTVVSPEI 46 (157)
T ss_pred CCHHHHHHHHHHHhCCCEEEEEcCcc
Confidence 45667889999999999999997653
No 272
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=24.06 E-value=1.1e+02 Score=29.87 Aligned_cols=54 Identities=13% Similarity=-0.040 Sum_probs=32.0
Q ss_pred CceEE-EccCChhHHHHHHhcCCEEEeCCCC--C--CCcHHHHHHHHcCCceEEeCccc
Q 008154 437 DKYRG-WVGFNVPISHRITAGCDILLMPSRF--E--PCGLNQLYAMRYGTIPVVHATGG 490 (576)
Q Consensus 437 ~~~~~-~~~~~~~~~~~ll~~~Dv~v~ps~~--E--~~g~s~lEAma~G~pvIat~~gg 490 (576)
.+++. ..+|+.+.-..+++...+=++-+.. + ++--.+--|+.+|+|||..+-+-
T Consensus 175 ~~iia~~gPfs~e~n~al~~~~~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~ 233 (256)
T TIGR00715 175 DRIIAMRGPFSEELEKALLREYRIDAVVTKASGEQGGELEKVKAAEALGINVIRIARPQ 233 (256)
T ss_pred hcEEEEeCCCCHHHHHHHHHHcCCCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCC
Confidence 34444 4446666666788744443333332 1 33345566788899999987764
No 273
>PRK04531 acetylglutamate kinase; Provisional
Probab=24.01 E-value=2.5e+02 Score=29.41 Aligned_cols=48 Identities=10% Similarity=0.207 Sum_probs=29.5
Q ss_pred CCCEEEEe-cccccccCHHHHHHHHHhhhcCCcEEEEE-eCCChhhHHHHHH
Q 008154 381 DCPLIGFI-GRLDYQKGIDLIRLAAPEILADDIQFVML-GSGDPQFESWMRD 430 (576)
Q Consensus 381 ~~~~i~~~-Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~-G~g~~~~~~~~~~ 430 (576)
.+..++-+ |..-. ...+.+++.+..|...+++++++ |.| +...+..+.
T Consensus 36 ~~~~VIKiGG~~l~-~~~~~l~~dla~L~~~G~~~VlVHGgg-pqI~~~l~~ 85 (398)
T PRK04531 36 ERFAVIKVGGAVLR-DDLEALASSLSFLQEVGLTPIVVHGAG-PQLDAELDA 85 (398)
T ss_pred CcEEEEEEChHHhh-cCHHHHHHHHHHHHHCCCcEEEEECCC-HHHHHHHHH
Confidence 34444444 44433 35788999998887767766666 555 455554443
No 274
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=23.93 E-value=36 Score=36.78 Aligned_cols=29 Identities=31% Similarity=0.288 Sum_probs=22.3
Q ss_pred cCcHHHHHhhHHHHHHhCCCcEEEEEecC
Q 008154 81 TGGLGDVCGSLPVALAARGHRVMVVSPRY 109 (576)
Q Consensus 81 ~GG~~~~~~~la~~l~~~G~~V~vi~~~~ 109 (576)
.+.--..+..++++|+++||+|+++++..
T Consensus 9 ~~SH~~~~~~l~~~L~~rGH~VTvl~~~~ 37 (500)
T PF00201_consen 9 AYSHFIFMRPLAEELAERGHNVTVLTPSP 37 (500)
T ss_dssp ---SHHHHHHHHHHHHHH-TTSEEEHHHH
T ss_pred CcCHHHHHHHHHHHHHhcCCceEEEEeec
Confidence 35567788999999999999999998753
No 275
>TIGR03029 EpsG chain length determinant protein tyrosine kinase EpsG. The proteins in this family are homologs of the EpsG protein found in Methylobacillus strain 12S and are generally found in operons with other Eps homologs. The protein is believed to function as the protein tyrosine kinase component of the chain length regulator (along with the transmembrane component EpsF).
Probab=23.86 E-value=1.5e+02 Score=28.95 Aligned_cols=28 Identities=11% Similarity=0.388 Sum_probs=24.5
Q ss_pred cCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 81 TGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 81 ~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
.-|-.+.+..+|.++++.|.+|.+|-.+
T Consensus 114 g~Gktt~a~nLA~~la~~g~~VllID~D 141 (274)
T TIGR03029 114 GEGCSYIAANLAIVFSQLGEKTLLIDAN 141 (274)
T ss_pred CCCHHHHHHHHHHHHHhcCCeEEEEeCC
Confidence 4678889999999999999999999654
No 276
>PRK09739 hypothetical protein; Provisional
Probab=23.81 E-value=1.6e+02 Score=27.18 Aligned_cols=40 Identities=25% Similarity=0.274 Sum_probs=28.8
Q ss_pred CceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEe
Q 008154 65 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~ 107 (576)
+|||++++.. |. ..|=...++..+++++.+.|++|.++-+
T Consensus 3 mmkiliI~~s--p~-~~s~s~~l~~~~~~~~~~~g~~v~~~dL 42 (199)
T PRK09739 3 SMRIYLVWAH--PR-HDSLTAKVAEAIHQRAQERGHQVEELDL 42 (199)
T ss_pred CceEEEEEcC--CC-CCCcHHHHHHHHHHHHHHCCCEEEEEEh
Confidence 5899999875 52 1233456667777788889999998864
No 277
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=23.72 E-value=1e+02 Score=29.48 Aligned_cols=32 Identities=31% Similarity=0.481 Sum_probs=23.8
Q ss_pred EEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEe
Q 008154 68 IVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 68 I~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~ 107 (576)
|=++|+. -+|++|. .+|++|.++|++|++++.
T Consensus 17 VR~itN~-----SSG~iG~---aLA~~L~~~G~~V~li~r 48 (229)
T PRK06732 17 VRGITNH-----STGQLGK---IIAETFLAAGHEVTLVTT 48 (229)
T ss_pred ceeecCc-----cchHHHH---HHHHHHHhCCCEEEEEEC
Confidence 6667652 2677884 577888899999999963
No 278
>PRK10427 putative PTS system fructose-like transporter subunit EIIB; Provisional
Probab=23.52 E-value=1.6e+02 Score=24.72 Aligned_cols=37 Identities=19% Similarity=0.058 Sum_probs=27.3
Q ss_pred ceEEEEeeccCCccccCcHHHHH--hhHHHHHHhCCCcEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVC--GSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~--~~la~~l~~~G~~V~vi~~ 107 (576)
|+|+.++. || .|-.-+++ .-|.++.+++||++.|=+-
T Consensus 3 mkivaVta--cp---~GiAht~lAAeaL~kAA~~~G~~i~VE~q 41 (114)
T PRK10427 3 AYLVAVTA--CV---SGVAHTYMAAERLEKLCQLEKWGVKIETQ 41 (114)
T ss_pred ceEEEEee--CC---CcHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 78888876 77 35554444 6777788889999998764
No 279
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=23.50 E-value=1.2e+02 Score=27.94 Aligned_cols=33 Identities=33% Similarity=0.470 Sum_probs=27.9
Q ss_pred EEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEe
Q 008154 68 IVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 68 I~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~ 107 (576)
++++|. -||..-.-..++++|++.|.+|+.|-.
T Consensus 5 ~v~~SG-------DgGw~~~d~~~a~~l~~~G~~VvGvds 37 (192)
T PF06057_consen 5 AVFFSG-------DGGWRDLDKQIAEALAKQGVPVVGVDS 37 (192)
T ss_pred EEEEeC-------CCCchhhhHHHHHHHHHCCCeEEEech
Confidence 566654 389999999999999999999999953
No 280
>TIGR00036 dapB dihydrodipicolinate reductase.
Probab=23.15 E-value=2.6e+02 Score=27.30 Aligned_cols=41 Identities=22% Similarity=0.134 Sum_probs=31.1
Q ss_pred HhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccc
Q 008154 454 TAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDT 494 (576)
Q Consensus 454 l~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~ 494 (576)
...+|++|-.|..+..--.+..|+.+|+|+|+...|.-.+.
T Consensus 66 ~~~~DvVIdfT~p~~~~~~~~~al~~g~~vVigttg~~~e~ 106 (266)
T TIGR00036 66 ETDPDVLIDFTTPEGVLNHLKFALEHGVRLVVGTTGFSEED 106 (266)
T ss_pred cCCCCEEEECCChHHHHHHHHHHHHCCCCEEEECCCCCHHH
Confidence 35689999888766666678899999999998666654333
No 281
>PF06564 YhjQ: YhjQ protein; InterPro: IPR017746 The YhjQ protein is encoded immediately upstream of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae, and in several species is clearly part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm [], based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=23.10 E-value=1.5e+02 Score=28.73 Aligned_cols=26 Identities=27% Similarity=0.321 Sum_probs=21.9
Q ss_pred CcHHHHHhhHHHHHHhCCCcEEEEEe
Q 008154 82 GGLGDVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 82 GG~~~~~~~la~~l~~~G~~V~vi~~ 107 (576)
-|-.+++-.||-+|+++|.+|.+|=.
T Consensus 13 vG~TTltAnLA~aL~~~G~~VlaID~ 38 (243)
T PF06564_consen 13 VGKTTLTANLAWALARLGESVLAIDL 38 (243)
T ss_pred CCHHHHHHHHHHHHHHCCCcEEEEeC
Confidence 34567888999999999999999954
No 282
>PRK05647 purN phosphoribosylglycinamide formyltransferase; Reviewed
Probab=23.05 E-value=3.5e+02 Score=25.16 Aligned_cols=35 Identities=23% Similarity=0.205 Sum_probs=23.8
Q ss_pred CceEEEEeeccCCccccCcHHHHHhhHHHHHHhCC--CcEEEEEec
Q 008154 65 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG--HRVMVVSPR 108 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G--~~V~vi~~~ 108 (576)
+|||++++ +|-|..+..+.+++.+.+ +.|.++.+.
T Consensus 1 m~ki~vl~---------sg~gs~~~~ll~~~~~~~~~~~I~~vvs~ 37 (200)
T PRK05647 1 MKRIVVLA---------SGNGSNLQAIIDACAAGQLPAEIVAVISD 37 (200)
T ss_pred CceEEEEE---------cCCChhHHHHHHHHHcCCCCcEEEEEEec
Confidence 37899995 344667788888888865 556554433
No 283
>TIGR00639 PurN phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent. In phylogenetic analyses, the member from Saccharomyces cerevisiae shows a long branch length but membership in the family, while the formyltetrahydrofolate deformylases form a closely related outgroup.
Probab=23.03 E-value=4.8e+02 Score=24.07 Aligned_cols=34 Identities=21% Similarity=0.167 Sum_probs=22.9
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCC--cEEEEEec
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGH--RVMVVSPR 108 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~--~V~vi~~~ 108 (576)
|||+++. +|-|..+..+.+++.+.++ +|.+|.+.
T Consensus 1 ~riail~---------sg~gs~~~~ll~~~~~~~l~~~I~~vi~~ 36 (190)
T TIGR00639 1 KRIVVLI---------SGNGSNLQAIIDACKEGKIPASVVLVISN 36 (190)
T ss_pred CeEEEEE---------cCCChhHHHHHHHHHcCCCCceEEEEEEC
Confidence 5788874 4556667888888888665 45554444
No 284
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=22.89 E-value=3.1e+02 Score=24.74 Aligned_cols=50 Identities=16% Similarity=0.176 Sum_probs=31.8
Q ss_pred cccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceE
Q 008154 391 LDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYR 440 (576)
Q Consensus 391 ~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~ 440 (576)
...+-+.+..-+.++.+...+..++++|-|.|.-+.+.....+.+...+.
T Consensus 79 ~~g~~~~~~~~~i~~~I~~~~pdiv~vglG~PkQE~~~~~~~~~l~~~v~ 128 (171)
T cd06533 79 HHGYFGPEEEEEIIERINASGADILFVGLGAPKQELWIARHKDRLPVPVA 128 (171)
T ss_pred cCCCCChhhHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHHHCCCCEE
Confidence 33333333333345555555788999999988778888887776654433
No 285
>cd01016 TroA Metal binding protein TroA. These proteins have been shown to function as initial receptors in ABC transport of Zn2+ and possibly Fe3+ in many eubacterial species. The TroA proteins belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=22.89 E-value=2.7e+02 Score=27.37 Aligned_cols=81 Identities=6% Similarity=-0.107 Sum_probs=47.3
Q ss_pred HHHhcCCEEEeCCC-CCCCcHHHHHHHHcCCceEEeCccc-cccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHH
Q 008154 452 RITAGCDILLMPSR-FEPCGLNQLYAMRYGTIPVVHATGG-LRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFA 529 (576)
Q Consensus 452 ~ll~~~Dv~v~ps~-~E~~g~s~lEAma~G~pvIat~~gg-~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~ 529 (576)
.-++.||++|.... +|+|--.++++...+.++|....+- ......+ +. .....--+..+|.+...+++.|.+.
T Consensus 46 ~~l~~Adliv~~G~~~E~w~~k~~~~~~~~~~~v~~~~~~~~~~~~~~---~~--~~~~dPH~Wldp~~~~~~a~~I~~~ 120 (276)
T cd01016 46 EKLQNADVVFYNGLHLEGKMSDVLSKLGSSKSVIALEDTLDRSQLILD---EE--EGTYDPHIWFDVKLWKYAVKAVAEV 120 (276)
T ss_pred HHHHhCCEEEEcCcChHHHHHHHHHHhccCCceEEeccCcCccccccc---cc--CCCCCCCcccCHHHHHHHHHHHHHH
Confidence 46899999999886 7888888888765445555543331 1111111 00 0001222334677788888888888
Q ss_pred HHHhhhCHHH
Q 008154 530 IRTYREHKSS 539 (576)
Q Consensus 530 l~~~~~~~~~ 539 (576)
+... +|+.
T Consensus 121 L~~~--dP~~ 128 (276)
T cd01016 121 LSEK--LPEH 128 (276)
T ss_pred HHHH--Cccc
Confidence 8743 4543
No 286
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=22.57 E-value=1e+02 Score=30.72 Aligned_cols=28 Identities=32% Similarity=0.443 Sum_probs=23.8
Q ss_pred cCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 81 TGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 81 ~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
.||.|-.=+..+++|.+.|++|+|+--.
T Consensus 6 tGGAGYIGSHtv~~Ll~~G~~vvV~DNL 33 (329)
T COG1087 6 TGGAGYIGSHTVRQLLKTGHEVVVLDNL 33 (329)
T ss_pred ecCcchhHHHHHHHHHHCCCeEEEEecC
Confidence 4888888888899999999999999533
No 287
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=22.51 E-value=3.8e+02 Score=24.21 Aligned_cols=25 Identities=12% Similarity=-0.104 Sum_probs=16.9
Q ss_pred HHHHHHHHHhhhcCCcEEEEEeCCC
Q 008154 397 IDLIRLAAPEILADDIQFVMLGSGD 421 (576)
Q Consensus 397 ~~~ll~a~~~L~~~~~~lii~G~g~ 421 (576)
...+++|+...++..-++-++|..+
T Consensus 63 ~~Dil~al~~a~~~~~~Iavv~~~~ 87 (176)
T PF06506_consen 63 GFDILRALAKAKKYGPKIAVVGYPN 87 (176)
T ss_dssp HHHHHHHHHHCCCCTSEEEEEEESS
T ss_pred HhHHHHHHHHHHhcCCcEEEEeccc
Confidence 3556778777766566777777654
No 288
>PLN02427 UDP-apiose/xylose synthase
Probab=22.23 E-value=1.1e+02 Score=31.70 Aligned_cols=36 Identities=19% Similarity=0.296 Sum_probs=27.0
Q ss_pred ccCCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhC-CCcEEEEE
Q 008154 61 QTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR-GHRVMVVS 106 (576)
Q Consensus 61 ~~~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~-G~~V~vi~ 106 (576)
...++|||+.+ ||.|..=..+++.|.+. |++|.++.
T Consensus 10 ~~~~~~~VlVT----------GgtGfIGs~lv~~L~~~~g~~V~~l~ 46 (386)
T PLN02427 10 KPIKPLTICMI----------GAGGFIGSHLCEKLMTETPHKVLALD 46 (386)
T ss_pred CcccCcEEEEE----------CCcchHHHHHHHHHHhcCCCEEEEEe
Confidence 34566888766 66666667889999998 59988875
No 289
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=22.03 E-value=1.3e+02 Score=30.01 Aligned_cols=26 Identities=19% Similarity=0.208 Sum_probs=18.5
Q ss_pred CcHHHHHhhHHHHHHhCCCcEEEEEe
Q 008154 82 GGLGDVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 82 GG~~~~~~~la~~l~~~G~~V~vi~~ 107 (576)
||.|-.-..+++.|.+.|++|.++..
T Consensus 12 G~~G~IG~~l~~~L~~~G~~V~~~~r 37 (325)
T PLN02989 12 GASGYIASWIVKLLLFRGYTINATVR 37 (325)
T ss_pred CCchHHHHHHHHHHHHCCCEEEEEEc
Confidence 44444446678889999999987753
No 290
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=21.91 E-value=1.5e+02 Score=29.62 Aligned_cols=26 Identities=27% Similarity=0.264 Sum_probs=20.0
Q ss_pred CcHHHHHhhHHHHHHhCCCcEEEEEe
Q 008154 82 GGLGDVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 82 GG~~~~~~~la~~l~~~G~~V~vi~~ 107 (576)
||.|-.=..+++.|.+.||+|.++..
T Consensus 11 GatGfIG~~l~~~L~~~g~~V~~~~r 36 (322)
T PLN02662 11 GASGYIASWLVKLLLQRGYTVKATVR 36 (322)
T ss_pred CChHHHHHHHHHHHHHCCCEEEEEEc
Confidence 55555556788999999999988764
No 291
>PF13614 AAA_31: AAA domain; PDB: 2VED_B 2PH1_A 3EA0_B 3FKQ_A 3KB1_B 1ION_A 3LA6_H 3BFV_B 3CIO_D.
Probab=21.61 E-value=2.5e+02 Score=24.34 Aligned_cols=39 Identities=23% Similarity=0.403 Sum_probs=28.0
Q ss_pred EEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCC
Q 008154 68 IVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFN 111 (576)
Q Consensus 68 I~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~ 111 (576)
|++++.. ...|..+.+..+|..|++.|++|.+|-.....
T Consensus 3 i~v~s~~-----~g~G~t~~a~~lA~~la~~~~~Vllid~~~~~ 41 (157)
T PF13614_consen 3 IAVWSPK-----GGVGKTTLALNLAAALARKGKKVLLIDFDFFS 41 (157)
T ss_dssp EEEEESS-----TTSSHHHHHHHHHHHHHHTTT-EEEEE--SSS
T ss_pred EEEECCC-----CCCCHHHHHHHHHHHHHhcCCCeEEEECCCCC
Confidence 5566542 25789999999999999999998888765433
No 292
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=21.51 E-value=93 Score=23.75 Aligned_cols=26 Identities=31% Similarity=0.316 Sum_probs=21.5
Q ss_pred cHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 83 GLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 83 G~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
|-|....++|..|+++|.+|+++...
T Consensus 6 GgG~ig~E~A~~l~~~g~~vtli~~~ 31 (80)
T PF00070_consen 6 GGGFIGIELAEALAELGKEVTLIERS 31 (80)
T ss_dssp SSSHHHHHHHHHHHHTTSEEEEEESS
T ss_pred CcCHHHHHHHHHHHHhCcEEEEEecc
Confidence 34555789999999999999999754
No 293
>TIGR01012 Sa_S2_E_A ribosomal protein Sa(cytosolic)/S2(archaeal). TIGR01011 describes the related protein of organelles and bacteria.
Probab=21.48 E-value=6.2e+02 Score=23.54 Aligned_cols=99 Identities=11% Similarity=-0.005 Sum_probs=52.4
Q ss_pred ccCHHHHHHHHHhhhc-CCcEEEEEeCCChhhHHHHHHHHHHhcCceE---EEccC-ChhHHHHHHhcCCEEEeCCCCCC
Q 008154 394 QKGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATYKDKYR---GWVGF-NVPISHRITAGCDILLMPSRFEP 468 (576)
Q Consensus 394 ~Kg~~~ll~a~~~L~~-~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~ll~~~Dv~v~ps~~E~ 468 (576)
.|=...|.+|+.-+.. .+-.++|+|..+ ......+..++......+ ...|. +.... .-+..=|+++.... -.
T Consensus 43 ~kT~~~L~~A~~~i~~i~~~~ILfVgtk~-~~~~~V~~~A~~~g~~~v~~RWlgGtLTN~~~-~~~~~Pdlliv~dp-~~ 119 (196)
T TIGR01012 43 RKTDERLRVAAKFLVRIEPEDILVVSARI-YGQKPVLKFAKVTGARAIAGRFTPGTFTNPMQ-KAFREPEVVVVTDP-RA 119 (196)
T ss_pred HHHHHHHHHHHHHHHHhhCCeEEEEecCH-HHHHHHHHHHHHhCCceECCeeCCCCCCCccc-cccCCCCEEEEECC-cc
Confidence 3445555555544433 255788899874 345556666654433221 12221 11111 12344455554332 12
Q ss_pred CcHHHHHHHHcCCceEE-eCcccccccc
Q 008154 469 CGLNQLYAMRYGTIPVV-HATGGLRDTV 495 (576)
Q Consensus 469 ~g~s~lEAma~G~pvIa-t~~gg~~e~i 495 (576)
-...+.||...|+|+|+ .|.-.-++.+
T Consensus 120 ~~~Av~EA~~l~IP~Iai~DTn~dp~~v 147 (196)
T TIGR01012 120 DHQALKEASEVGIPIVALCDTDNPLRYV 147 (196)
T ss_pred ccHHHHHHHHcCCCEEEEeeCCCCCccC
Confidence 34688999999999999 4544444444
No 294
>PRK07454 short chain dehydrogenase; Provisional
Probab=21.48 E-value=1.2e+02 Score=28.68 Aligned_cols=34 Identities=24% Similarity=0.423 Sum_probs=23.1
Q ss_pred CceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEe
Q 008154 65 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~ 107 (576)
.||.++++. .+||+| ..+++.|.+.|++|.+++.
T Consensus 5 ~~k~vlItG------~sg~iG---~~la~~l~~~G~~V~~~~r 38 (241)
T PRK07454 5 SMPRALITG------ASSGIG---KATALAFAKAGWDLALVAR 38 (241)
T ss_pred CCCEEEEeC------CCchHH---HHHHHHHHHCCCEEEEEeC
Confidence 456666642 145565 5677888899999888864
No 295
>PTZ00254 40S ribosomal protein SA; Provisional
Probab=21.44 E-value=5e+02 Score=25.18 Aligned_cols=100 Identities=13% Similarity=-0.043 Sum_probs=52.1
Q ss_pred cccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceE---EEccC-ChhHHHHHHhcCCEEEeCCCC
Q 008154 393 YQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYR---GWVGF-NVPISHRITAGCDILLMPSRF 466 (576)
Q Consensus 393 ~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~ll~~~Dv~v~ps~~ 466 (576)
-.|=...|..|++-+.. .+-.++++|.-+ .........++......+ ...|. +.. ...-+..=|++|....
T Consensus 51 L~kT~~~L~~Aa~~i~~i~~~~~Il~Vstr~-~~~~~V~k~A~~tg~~~i~~Rw~pGtlTN~-~~~~f~~P~llIV~Dp- 127 (249)
T PTZ00254 51 LAKTWEKLKLAARVIAAIENPADVVVVSSRP-YGQRAVLKFAQYTGASAIAGRFTPGTFTNQ-IQKKFMEPRLLIVTDP- 127 (249)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcEEEEEcCH-HHHHHHHHHHHHhCCeEECCcccCCCCCCc-cccccCCCCEEEEeCC-
Confidence 34555556666555433 355677888764 345555555554332221 12221 111 1122334455554432
Q ss_pred CCCcHHHHHHHHcCCceEE-eCcccccccc
Q 008154 467 EPCGLNQLYAMRYGTIPVV-HATGGLRDTV 495 (576)
Q Consensus 467 E~~g~s~lEAma~G~pvIa-t~~gg~~e~i 495 (576)
-.--..+.||...|+|+|+ .|.-..++.+
T Consensus 128 ~~d~qAI~EA~~lnIPvIal~DTds~p~~V 157 (249)
T PTZ00254 128 RTDHQAIREASYVNIPVIALCDTDSPLEYV 157 (249)
T ss_pred CcchHHHHHHHHhCCCEEEEecCCCCcccC
Confidence 2334678999999999999 4544444444
No 296
>PRK06849 hypothetical protein; Provisional
Probab=21.30 E-value=1.2e+02 Score=31.41 Aligned_cols=35 Identities=14% Similarity=0.217 Sum_probs=26.5
Q ss_pred CCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 64 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 64 ~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
.+|+|+++... ......++++|.+.||+|+++...
T Consensus 3 ~~~~VLI~G~~----------~~~~l~iar~l~~~G~~Vi~~d~~ 37 (389)
T PRK06849 3 TKKTVLITGAR----------APAALELARLFHNAGHTVILADSL 37 (389)
T ss_pred CCCEEEEeCCC----------cHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35788888432 234688999999999999999654
No 297
>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme.
Probab=21.23 E-value=5.4e+02 Score=25.00 Aligned_cols=81 Identities=11% Similarity=0.134 Sum_probs=47.4
Q ss_pred HHHHHHcCCceEEeCcc---ccccccccccccccCCCCCcceeEeCCC-CHHHHHHHHHHHHHHhhhCHHHHHHHHHHH-
Q 008154 473 QLYAMRYGTIPVVHATG---GLRDTVENFNPFAREGSGEGTGWSFLPL-SEESMLTALRFAIRTYREHKSSWEGLMRRG- 547 (576)
Q Consensus 473 ~lEAma~G~pvIat~~g---g~~e~i~~~~~~~~~~~~~~~G~~~~~~-d~~~la~~i~~~l~~~~~~~~~~~~~~~~a- 547 (576)
..--|+|+-.|+..... ++.+.+.+ ...=+-+..+ +.+++.++|+-+. ++++..+++++++
T Consensus 161 l~~~l~~~Svvl~~~~~~~~~~~~~L~P----------~~HYvPv~~d~sd~~l~~~i~~~~----~~~~~a~~Ia~~~~ 226 (256)
T smart00672 161 LKYILACDSVVLKVKPEYYEFFSRGLQP----------WVHYWPIKSDLSCRELKEAVDWGN----EHDKKAQEIGKRGS 226 (256)
T ss_pred HHHHHhcCceEEEeCCchhHHHHhcccC----------ccceEEeeCCCchhhHHHHHHHHH----hCHHHHHHHHHHHH
Confidence 34457777777665532 22233333 3333333332 1233666666554 4888888888887
Q ss_pred --HhhhCCHHHHHHHHHHHHHH
Q 008154 548 --MEKDYTWENAAIQYEQVFEW 567 (576)
Q Consensus 548 --~~~~fs~~~~~~~y~~~y~~ 567 (576)
+.+..+.+.+...+..++.+
T Consensus 227 ~~~~~~L~~~~~~~Y~~~ll~e 248 (256)
T smart00672 227 EFIQQNLSMEDVYDYMFHLLQE 248 (256)
T ss_pred HHHHHHcCHHHHHHHHHHHHHH
Confidence 45568888888877776654
No 298
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=21.18 E-value=1.1e+02 Score=30.87 Aligned_cols=25 Identities=32% Similarity=0.542 Sum_probs=18.8
Q ss_pred CcHHHHHhhHHHHHHhCCCcEEEEE
Q 008154 82 GGLGDVCGSLPVALAARGHRVMVVS 106 (576)
Q Consensus 82 GG~~~~~~~la~~l~~~G~~V~vi~ 106 (576)
||.|-.-..+++.|.+.|++|+++.
T Consensus 7 GatG~iG~~l~~~L~~~g~~V~~~~ 31 (338)
T PRK10675 7 GGSGYIGSHTCVQLLQNGHDVVILD 31 (338)
T ss_pred CCCChHHHHHHHHHHHCCCeEEEEe
Confidence 4444455667888899999999885
No 299
>PRK07308 flavodoxin; Validated
Probab=20.73 E-value=1.5e+02 Score=25.70 Aligned_cols=34 Identities=26% Similarity=0.368 Sum_probs=28.3
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEE
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 106 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~ 106 (576)
.+|+|.|. .|....++..+++.|.+.|++|.+.-
T Consensus 4 ~~IvY~S~-------tGnTe~iA~~ia~~l~~~g~~~~~~~ 37 (146)
T PRK07308 4 AKIVYASM-------TGNTEEIADIVADKLRELGHDVDVDE 37 (146)
T ss_pred EEEEEECC-------CchHHHHHHHHHHHHHhCCCceEEEe
Confidence 56777763 58899999999999999999988764
No 300
>PRK01906 tetraacyldisaccharide 4'-kinase; Provisional
Probab=20.64 E-value=4.4e+02 Score=26.91 Aligned_cols=39 Identities=36% Similarity=0.338 Sum_probs=30.4
Q ss_pred EEEEeeccCCccccCcHH--HHHhhHHHHHHhCCCcEEEEEecCCC
Q 008154 68 IVFVTAEAAPYSKTGGLG--DVCGSLPVALAARGHRVMVVSPRYFN 111 (576)
Q Consensus 68 I~~~s~e~~P~~~~GG~~--~~~~~la~~l~~~G~~V~vi~~~~~~ 111 (576)
|..|.+ +..||.| -++.-+++.|.++|+++.|++-.|+.
T Consensus 58 VIsVGN-----itvGGTGKTP~v~~La~~l~~~G~~~~IlSRGYg~ 98 (338)
T PRK01906 58 VVVVGN-----VTVGGTGKTPTVIALVDALRAAGFTPGVVSRGYGA 98 (338)
T ss_pred EEEECC-----ccCCCCChHHHHHHHHHHHHHcCCceEEEecCCCC
Confidence 555543 3356655 57899999999999999999998866
No 301
>PRK08655 prephenate dehydrogenase; Provisional
Probab=20.64 E-value=1.1e+02 Score=32.51 Aligned_cols=27 Identities=26% Similarity=0.417 Sum_probs=20.4
Q ss_pred CcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 82 GGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 82 GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
||.|..-..+++.|.+.|++|+++...
T Consensus 7 GG~G~mG~slA~~L~~~G~~V~v~~r~ 33 (437)
T PRK08655 7 GGTGGLGKWFARFLKEKGFEVIVTGRD 33 (437)
T ss_pred ecCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 555555577888899999999888743
No 302
>PLN02764 glycosyltransferase family protein
Probab=20.56 E-value=1.7e+02 Score=31.26 Aligned_cols=67 Identities=9% Similarity=-0.077 Sum_probs=40.4
Q ss_pred HHHhcCCE--EEeCCCCCCCcHHHHHHHHcCCceEEeCcc----ccccccccccccccCCCCCcceeEeCC-----CCHH
Q 008154 452 RITAGCDI--LLMPSRFEPCGLNQLYAMRYGTIPVVHATG----GLRDTVENFNPFAREGSGEGTGWSFLP-----LSEE 520 (576)
Q Consensus 452 ~ll~~~Dv--~v~ps~~E~~g~s~lEAma~G~pvIat~~g----g~~e~i~~~~~~~~~~~~~~~G~~~~~-----~d~~ 520 (576)
.+++...+ ||.- +=..|.+||+.+|+|+|+-... .+...+.+ .-+.|+.+.. -+.+
T Consensus 329 ~vL~h~~v~~FvtH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~---------~~g~gv~~~~~~~~~~~~e 395 (453)
T PLN02764 329 LILSHPSVGCFVSH----CGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSD---------ELKVSVEVAREETGWFSKE 395 (453)
T ss_pred HHhcCcccCeEEec----CCchHHHHHHHcCCCEEeCCcccchHHHHHHHHH---------HhceEEEeccccCCccCHH
Confidence 47776544 5532 2346889999999999996542 22222221 0244554421 2678
Q ss_pred HHHHHHHHHHH
Q 008154 521 SMLTALRFAIR 531 (576)
Q Consensus 521 ~la~~i~~~l~ 531 (576)
++.+++++++.
T Consensus 396 ~i~~av~~vm~ 406 (453)
T PLN02764 396 SLRDAINSVMK 406 (453)
T ss_pred HHHHHHHHHhc
Confidence 88888888875
Done!