Query 008154
Match_columns 576
No_of_seqs 279 out of 3491
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 19:25:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008154.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008154hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vue_A GBSS-I, granule-bound s 100.0 3.8E-64 1.3E-68 542.6 44.7 485 61-569 5-512 (536)
2 1rzu_A Glycogen synthase 1; gl 100.0 5.2E-48 1.8E-52 415.1 40.0 469 66-573 1-480 (485)
3 2qzs_A Glycogen synthase; glyc 100.0 7.9E-48 2.7E-52 413.7 40.8 467 66-572 1-480 (485)
4 3fro_A GLGA glycogen synthase; 100.0 6.4E-45 2.2E-49 385.0 41.8 424 64-571 1-433 (439)
5 3nb0_A Glycogen [starch] synth 100.0 1.5E-44 5.2E-49 383.5 21.9 449 67-570 29-635 (725)
6 2c4m_A Glycogen phosphorylase; 100.0 8.6E-43 2.9E-47 375.8 19.7 470 79-570 111-721 (796)
7 1l5w_A Maltodextrin phosphoryl 100.0 2.5E-41 8.4E-46 364.5 28.1 467 80-570 111-732 (796)
8 2gj4_A Glycogen phosphorylase, 100.0 1E-40 3.5E-45 360.8 22.1 470 79-564 120-812 (824)
9 3s28_A Sucrose synthase 1; gly 100.0 4.4E-39 1.5E-43 357.9 35.4 423 65-568 278-769 (816)
10 2r60_A Glycosyl transferase, g 100.0 5.3E-39 1.8E-43 346.2 34.2 404 65-572 7-463 (499)
11 3c48_A Predicted glycosyltrans 100.0 1.8E-38 6E-43 336.2 36.6 398 61-573 16-430 (438)
12 2jjm_A Glycosyl transferase, g 100.0 4.6E-37 1.6E-41 320.8 35.9 371 66-572 14-389 (394)
13 3okp_A GDP-mannose-dependent a 100.0 3.6E-37 1.2E-41 320.9 34.5 368 64-572 3-383 (394)
14 2x6q_A Trehalose-synthase TRET 100.0 5.5E-35 1.9E-39 307.3 36.1 362 64-569 39-415 (416)
15 2iw1_A Lipopolysaccharide core 100.0 1E-36 3.4E-41 315.4 22.0 363 66-569 1-372 (374)
16 2gek_A Phosphatidylinositol ma 100.0 4E-35 1.4E-39 306.8 31.9 368 60-573 15-388 (406)
17 3oy2_A Glycosyltransferase B73 100.0 9.1E-35 3.1E-39 305.2 29.8 231 292-572 127-394 (413)
18 2iuy_A Avigt4, glycosyltransfe 100.0 1.2E-34 4E-39 296.6 26.3 317 65-573 3-340 (342)
19 1ygp_A Yeast glycogen phosphor 100.0 3.3E-32 1.1E-36 291.9 21.1 468 78-563 160-870 (879)
20 2x0d_A WSAF; GT4 family, trans 100.0 5.5E-31 1.9E-35 275.7 14.2 358 63-570 44-411 (413)
21 2hy7_A Glucuronosyltransferase 100.0 5.6E-29 1.9E-33 260.4 15.9 200 289-570 171-381 (406)
22 1uqt_A Alpha, alpha-trehalose- 100.0 2.9E-27 9.8E-32 250.8 26.0 301 204-568 123-454 (482)
23 1f0k_A MURG, UDP-N-acetylgluco 100.0 3.8E-27 1.3E-31 242.7 24.6 339 65-569 6-358 (364)
24 2vsy_A XCC0866; transferase, g 99.9 8.2E-26 2.8E-30 247.1 29.7 211 296-572 328-563 (568)
25 3beo_A UDP-N-acetylglucosamine 99.9 3.4E-25 1.2E-29 229.0 21.3 218 294-566 148-374 (375)
26 1vgv_A UDP-N-acetylglucosamine 99.9 8.3E-25 2.8E-29 226.9 19.6 234 294-573 139-381 (384)
27 2bfw_A GLGA glycogen synthase; 99.9 7.4E-24 2.5E-28 198.9 21.6 184 333-547 1-192 (200)
28 3t5t_A Putative glycosyltransf 99.9 1.9E-23 6.4E-28 218.9 26.6 287 205-568 150-473 (496)
29 3qhp_A Type 1 capsular polysac 99.9 9.8E-23 3.4E-27 185.3 18.8 159 382-560 2-166 (166)
30 1v4v_A UDP-N-acetylglucosamine 99.9 1.8E-20 6E-25 193.8 24.2 219 293-570 143-366 (376)
31 2f9f_A First mannosyl transfer 99.8 3E-20 1E-24 170.9 17.8 138 380-531 21-161 (177)
32 2xci_A KDO-transferase, 3-deox 99.8 2.5E-19 8.4E-24 185.0 22.3 197 289-547 146-356 (374)
33 3otg_A CALG1; calicheamicin, T 99.7 2E-16 7E-21 165.3 22.7 160 381-567 242-409 (412)
34 3rhz_A GTF3, nucleotide sugar 99.7 1.8E-15 6.2E-20 152.8 24.8 244 204-561 74-329 (339)
35 3ot5_A UDP-N-acetylglucosamine 99.7 7.4E-16 2.5E-20 160.3 20.4 218 295-565 168-392 (403)
36 3dzc_A UDP-N-acetylglucosamine 99.7 8.8E-16 3E-20 159.5 19.5 222 294-563 164-392 (396)
37 2iyf_A OLED, oleandomycin glyc 99.6 4.8E-14 1.7E-18 148.1 25.5 160 381-568 232-401 (430)
38 3s2u_A UDP-N-acetylglucosamine 99.6 1E-12 3.5E-17 134.9 30.4 161 383-566 182-356 (365)
39 4fzr_A SSFS6; structural genom 99.6 7.3E-15 2.5E-19 152.8 13.3 152 381-562 227-396 (398)
40 3ia7_A CALG4; glycosysltransfe 99.5 2.6E-12 8.8E-17 133.4 26.5 159 381-567 231-399 (402)
41 3oti_A CALG3; calicheamicin, T 99.5 1.3E-12 4.6E-17 135.7 20.9 154 381-565 232-396 (398)
42 3rsc_A CALG2; TDP, enediyne, s 99.5 2E-11 6.8E-16 127.4 27.5 159 381-567 247-414 (415)
43 3tsa_A SPNG, NDP-rhamnosyltran 99.4 8.2E-13 2.8E-17 136.8 15.4 158 381-565 218-387 (391)
44 2p6p_A Glycosyl transferase; X 99.4 1.2E-10 4.2E-15 120.1 27.0 154 381-565 210-378 (384)
45 4hwg_A UDP-N-acetylglucosamine 99.4 8.8E-13 3E-17 135.9 9.7 220 295-566 145-375 (385)
46 2iya_A OLEI, oleandomycin glyc 99.1 3.8E-08 1.3E-12 102.8 30.6 158 381-566 255-421 (424)
47 3q3e_A HMW1C-like glycosyltran 99.0 8.6E-09 2.9E-13 109.8 16.1 181 374-568 433-623 (631)
48 3h4t_A Glycosyltransferase GTF 98.9 3.3E-07 1.1E-11 95.0 26.2 153 381-566 221-382 (404)
49 4amg_A Snogd; transferase, pol 98.8 1.7E-07 5.8E-12 96.8 18.8 154 381-563 237-397 (400)
50 2o6l_A UDP-glucuronosyltransfe 98.7 1.3E-07 4.4E-12 85.4 12.0 128 381-541 21-159 (170)
51 1rrv_A Glycosyltransferase GTF 98.6 2.3E-06 7.8E-11 89.0 21.7 133 381-546 237-379 (416)
52 2yjn_A ERYCIII, glycosyltransf 98.4 1.1E-06 3.8E-11 92.1 13.1 156 381-566 267-435 (441)
53 1iir_A Glycosyltransferase GTF 98.0 2.2E-05 7.5E-10 81.5 11.8 156 381-571 238-401 (415)
54 4gyw_A UDP-N-acetylglucosamine 97.6 0.0023 7.8E-08 71.0 20.1 184 371-569 514-706 (723)
55 1psw_A ADP-heptose LPS heptosy 95.8 0.066 2.3E-06 53.4 12.2 112 367-486 167-286 (348)
56 3hbm_A UDP-sugar hydrolase; PS 95.2 0.03 1E-06 54.3 6.9 93 383-487 159-251 (282)
57 3hbf_A Flavonoid 3-O-glucosylt 94.5 0.27 9.3E-06 51.0 12.4 134 381-531 273-413 (454)
58 2c1x_A UDP-glucose flavonoid 3 94.3 0.16 5.5E-06 52.9 10.1 131 381-531 271-411 (456)
59 2vch_A Hydroquinone glucosyltr 93.8 0.71 2.4E-05 48.3 13.9 136 381-531 268-428 (480)
60 3tov_A Glycosyl transferase fa 93.1 0.62 2.1E-05 46.4 11.7 119 370-497 175-297 (349)
61 2acv_A Triterpene UDP-glucosyl 92.2 0.65 2.2E-05 48.3 10.8 132 381-531 276-424 (463)
62 2jzc_A UDP-N-acetylglucosamine 91.4 0.22 7.4E-06 46.2 5.3 43 442-489 118-161 (224)
63 2pq6_A UDP-glucuronosyl/UDP-gl 91.3 2.2 7.5E-05 44.5 13.7 133 381-531 295-438 (482)
64 2gt1_A Lipopolysaccharide hept 90.4 1.5 5.1E-05 43.0 10.8 99 381-486 178-278 (326)
65 3l7i_A Teichoic acid biosynthe 86.3 5.1 0.00017 44.1 12.7 196 294-531 476-682 (729)
66 1iir_A Glycosyltransferase GTF 68.9 4 0.00014 41.3 4.6 37 66-108 1-37 (415)
67 2yjn_A ERYCIII, glycosyltransf 67.1 3.2 0.00011 42.4 3.4 39 64-108 19-57 (441)
68 4f3y_A DHPR, dihydrodipicolina 66.5 6 0.0002 37.6 4.9 62 451-517 68-129 (272)
69 4b4o_A Epimerase family protei 65.6 4.8 0.00017 38.5 4.2 32 66-107 1-32 (298)
70 2zay_A Response regulator rece 63.9 57 0.002 26.4 10.7 110 411-533 8-129 (147)
71 3ijp_A DHPR, dihydrodipicolina 60.6 7.2 0.00024 37.4 4.2 62 451-517 83-144 (288)
72 2d1p_A TUSD, hypothetical UPF0 59.9 14 0.00047 31.2 5.4 39 65-106 12-51 (140)
73 1rcu_A Conserved hypothetical 58.7 99 0.0034 27.4 11.3 74 452-528 114-191 (195)
74 2hy5_A Putative sulfurtransfer 57.3 16 0.00055 30.1 5.5 38 66-106 1-39 (130)
75 3gt7_A Sensor protein; structu 53.6 80 0.0028 26.0 9.6 110 411-533 7-128 (154)
76 3n53_A Response regulator rece 53.3 86 0.0029 25.1 10.2 67 455-531 45-121 (140)
77 3tqr_A Phosphoribosylglycinami 52.4 37 0.0012 30.8 7.4 39 61-108 1-40 (215)
78 3to5_A CHEY homolog; alpha(5)b 51.8 82 0.0028 25.9 9.0 114 409-531 10-132 (134)
79 2pq6_A UDP-glucuronosyl/UDP-gl 51.6 13 0.00045 38.4 4.9 38 65-108 8-45 (482)
80 2vch_A Hydroquinone glucosyltr 48.2 13 0.00045 38.4 4.2 40 64-109 5-45 (480)
81 4dad_A Putative pilus assembly 47.9 62 0.0021 26.2 7.9 110 411-531 20-140 (146)
82 1kjn_A MTH0777; hypotethical p 47.4 32 0.0011 29.0 5.5 42 62-107 3-44 (157)
83 3ty2_A 5'-nucleotidase SURE; s 47.0 16 0.00056 34.2 4.1 41 63-111 9-49 (261)
84 3grc_A Sensor protein, kinase; 45.3 1.1E+02 0.0039 24.2 12.8 110 411-533 6-128 (140)
85 3kht_A Response regulator; PSI 44.3 1.2E+02 0.0042 24.3 12.4 112 411-533 5-129 (144)
86 3nbm_A PTS system, lactose-spe 44.2 46 0.0016 26.5 5.9 43 63-111 4-46 (108)
87 3nhm_A Response regulator; pro 43.4 1.2E+02 0.004 23.8 12.2 110 412-532 5-122 (133)
88 4gi5_A Quinone reductase; prot 43.2 29 0.00099 33.0 5.3 40 64-107 21-61 (280)
89 3lua_A Response regulator rece 42.1 89 0.003 25.0 7.9 108 411-531 4-126 (140)
90 3h5i_A Response regulator/sens 41.9 1.3E+02 0.0045 24.0 13.4 109 411-532 5-124 (140)
91 2j48_A Two-component sensor ki 40.6 1.2E+02 0.0039 22.9 8.9 104 413-529 3-115 (119)
92 3cg4_A Response regulator rece 40.5 1.4E+02 0.0047 23.8 12.3 111 410-533 6-128 (142)
93 3auf_A Glycinamide ribonucleot 40.2 80 0.0027 28.9 7.7 39 61-108 18-58 (229)
94 1jx7_A Hypothetical protein YC 39.5 38 0.0013 26.8 4.9 38 66-106 2-41 (117)
95 1lss_A TRK system potassium up 39.2 30 0.001 28.1 4.4 32 65-107 4-35 (140)
96 2x4g_A Nucleoside-diphosphate- 38.9 26 0.00088 33.9 4.5 35 64-108 12-46 (342)
97 2hy5_B Intracellular sulfur ox 38.9 40 0.0014 28.0 5.0 38 66-106 5-43 (136)
98 3mc3_A DSRE/DSRF-like family p 38.6 42 0.0014 27.7 5.1 41 64-107 14-54 (134)
99 3heb_A Response regulator rece 38.5 1.6E+02 0.0053 23.9 11.2 108 411-531 4-134 (152)
100 2pln_A HP1043, response regula 38.1 1.5E+02 0.005 23.4 10.7 105 411-531 18-132 (137)
101 1p9l_A Dihydrodipicolinate red 37.8 1E+02 0.0036 28.4 8.2 81 413-495 2-84 (245)
102 3ew7_A LMO0794 protein; Q8Y8U8 37.2 29 0.00098 30.9 4.2 33 66-108 1-33 (221)
103 2phj_A 5'-nucleotidase SURE; S 37.1 28 0.00095 32.4 4.0 39 65-111 1-39 (251)
104 1xvl_A Mn transporter, MNTC pr 36.5 52 0.0018 31.9 6.1 89 452-547 90-179 (321)
105 3h2s_A Putative NADH-flavin re 36.3 30 0.001 30.9 4.2 32 66-107 1-32 (224)
106 3t6k_A Response regulator rece 36.2 1.6E+02 0.0055 23.3 11.0 107 412-531 5-123 (136)
107 2qsj_A DNA-binding response re 35.8 1.7E+02 0.0059 23.6 10.5 110 411-531 3-123 (154)
108 3cz5_A Two-component response 35.2 1.4E+02 0.0048 24.2 8.2 109 411-531 5-124 (153)
109 1rpn_A GDP-mannose 4,6-dehydra 35.1 30 0.001 33.3 4.2 40 59-108 8-47 (335)
110 3hdg_A Uncharacterized protein 34.8 1.7E+02 0.0057 23.1 10.5 108 411-531 7-124 (137)
111 3cnb_A DNA-binding response re 34.5 1.7E+02 0.0058 23.1 12.0 109 411-531 8-129 (143)
112 3ruf_A WBGU; rossmann fold, UD 34.4 30 0.001 33.6 4.1 39 60-108 20-58 (351)
113 3eul_A Possible nitrate/nitrit 34.2 1.8E+02 0.0063 23.4 11.3 110 411-531 15-134 (152)
114 1k66_A Phytochrome response re 34.1 1.8E+02 0.006 23.2 10.2 67 456-532 62-138 (149)
115 1vl0_A DTDP-4-dehydrorhamnose 34.0 21 0.00071 33.7 2.8 38 59-106 6-43 (292)
116 3l4b_C TRKA K+ channel protien 33.7 41 0.0014 30.2 4.7 25 84-108 8-32 (218)
117 2qr3_A Two-component system re 33.1 1.8E+02 0.0061 22.9 9.0 107 412-531 4-125 (140)
118 1wcv_1 SOJ, segregation protei 32.8 38 0.0013 31.3 4.4 41 63-109 3-45 (257)
119 3jte_A Response regulator rece 32.3 1.9E+02 0.0064 22.9 13.3 107 412-531 4-122 (143)
120 1jbe_A Chemotaxis protein CHEY 32.0 1.8E+02 0.006 22.5 9.9 109 411-531 4-124 (128)
121 3e8x_A Putative NAD-dependent 32.0 40 0.0014 30.5 4.3 35 64-108 20-54 (236)
122 2d1p_B TUSC, hypothetical UPF0 31.4 69 0.0024 25.7 5.2 37 67-106 3-39 (119)
123 3dfu_A Uncharacterized protein 31.4 15 0.00051 33.9 1.2 35 62-107 3-37 (232)
124 2e6c_A 5'-nucleotidase SURE; S 31.0 39 0.0013 31.3 3.9 38 66-111 1-38 (244)
125 4id9_A Short-chain dehydrogena 30.6 36 0.0012 32.9 4.0 37 62-108 16-52 (347)
126 3dhn_A NAD-dependent epimerase 30.4 43 0.0015 30.0 4.2 34 65-108 4-37 (227)
127 2rjn_A Response regulator rece 30.4 2.2E+02 0.0074 23.0 9.8 108 411-531 7-125 (154)
128 2pk3_A GDP-6-deoxy-D-LYXO-4-he 30.4 40 0.0014 32.1 4.2 25 81-108 21-45 (321)
129 1j9j_A Stationary phase surviV 29.9 42 0.0015 31.1 4.0 38 66-111 1-38 (247)
130 3dqp_A Oxidoreductase YLBE; al 29.3 37 0.0013 30.3 3.6 33 66-108 1-33 (219)
131 4e7p_A Response regulator; DNA 29.2 2.2E+02 0.0076 22.8 11.5 110 411-531 20-139 (150)
132 3klo_A Transcriptional regulat 29.2 2.3E+02 0.0078 24.9 9.1 114 411-531 7-128 (225)
133 4dzz_A Plasmid partitioning pr 28.9 67 0.0023 28.1 5.2 39 66-108 1-39 (206)
134 3r0j_A Possible two component 28.9 3.2E+02 0.011 24.5 12.0 109 411-532 23-141 (250)
135 3kjh_A CO dehydrogenase/acetyl 28.7 38 0.0013 30.8 3.6 38 66-109 1-38 (254)
136 3hzh_A Chemotaxis response reg 28.6 2.4E+02 0.0081 23.0 10.2 65 456-530 83-155 (157)
137 1k68_A Phytochrome response re 28.5 2.1E+02 0.0072 22.3 12.3 67 456-532 55-131 (140)
138 2acv_A Triterpene UDP-glucosyl 28.2 42 0.0014 34.3 4.1 39 65-109 9-49 (463)
139 2r4q_A Phosphotransferase syst 28.2 68 0.0023 25.4 4.3 40 65-107 2-41 (106)
140 1l5x_A SurviVal protein E; str 28.1 48 0.0016 31.4 4.1 38 66-111 1-38 (280)
141 2ywr_A Phosphoribosylglycinami 28.1 1.2E+02 0.0041 27.3 6.7 33 66-107 2-36 (216)
142 1jay_A Coenzyme F420H2:NADP+ o 28.0 48 0.0016 29.4 4.1 26 82-107 7-32 (212)
143 3ic5_A Putative saccharopine d 27.9 59 0.002 25.2 4.2 32 65-107 5-37 (118)
144 3f6r_A Flavodoxin; FMN binding 27.3 76 0.0026 26.2 5.0 28 81-108 12-39 (148)
145 3bfv_A CAPA1, CAPB2, membrane 27.1 1.1E+02 0.0036 28.7 6.4 45 63-111 79-123 (271)
146 3jx9_A Putative phosphoheptose 27.1 61 0.0021 28.1 4.3 43 61-111 74-117 (170)
147 1qkk_A DCTD, C4-dicarboxylate 26.8 2.5E+02 0.0085 22.6 10.8 108 411-531 3-120 (155)
148 2q5c_A NTRC family transcripti 26.4 2.1E+02 0.0073 25.1 8.0 42 397-440 80-121 (196)
149 3fgn_A Dethiobiotin synthetase 26.4 1.1E+02 0.0039 28.2 6.3 45 59-107 19-63 (251)
150 3oh8_A Nucleoside-diphosphate 26.2 52 0.0018 34.1 4.5 34 65-108 147-180 (516)
151 3f6c_A Positive transcription 26.2 2.3E+02 0.0079 22.0 11.2 107 412-531 2-119 (134)
152 1toa_A Tromp-1, protein (perip 25.7 1.2E+02 0.0042 29.0 6.7 88 452-547 83-172 (313)
153 3k96_A Glycerol-3-phosphate de 25.7 44 0.0015 32.9 3.6 38 59-107 23-60 (356)
154 2pju_A Propionate catabolism o 25.6 2.8E+02 0.0095 25.1 8.7 104 397-533 92-195 (225)
155 3hv2_A Response regulator/HD d 25.5 2.6E+02 0.009 22.5 10.1 66 456-531 58-132 (153)
156 2v4n_A Multifunctional protein 25.3 59 0.002 30.3 4.1 38 66-111 2-39 (254)
157 2qxy_A Response regulator; reg 25.1 2.5E+02 0.0086 22.1 8.8 107 411-531 4-120 (142)
158 2qyt_A 2-dehydropantoate 2-red 25.0 36 0.0012 32.5 2.8 36 60-106 3-44 (317)
159 3doj_A AT3G25530, dehydrogenas 24.8 57 0.0019 31.2 4.1 34 63-107 19-52 (310)
160 2c4m_A Glycogen phosphorylase; 24.8 95 0.0032 34.0 6.1 46 518-563 736-783 (796)
161 2r48_A Phosphotransferase syst 24.7 79 0.0027 25.0 4.1 38 65-107 2-41 (106)
162 3guy_A Short-chain dehydrogena 24.7 54 0.0019 29.5 3.8 33 66-107 1-33 (230)
163 3mcu_A Dipicolinate synthase, 24.7 66 0.0023 28.9 4.2 35 66-108 6-42 (207)
164 1t2a_A GDP-mannose 4,6 dehydra 24.6 57 0.0019 31.9 4.2 25 81-108 33-57 (375)
165 3cio_A ETK, tyrosine-protein k 24.6 1.3E+02 0.0044 28.6 6.6 45 63-111 101-145 (299)
166 2jba_A Phosphate regulon trans 24.5 2.4E+02 0.0081 21.6 8.2 66 456-531 46-121 (127)
167 3lqk_A Dipicolinate synthase s 24.5 62 0.0021 29.0 3.9 36 65-108 7-44 (201)
168 2qip_A Protein of unknown func 24.4 1.4E+02 0.0049 25.3 6.3 68 393-463 90-159 (165)
169 2q62_A ARSH; alpha/beta, flavo 24.3 94 0.0032 28.7 5.4 44 60-107 29-73 (247)
170 2c5a_A GDP-mannose-3', 5'-epim 24.3 63 0.0022 31.7 4.5 35 64-108 28-62 (379)
171 3rqi_A Response regulator prot 24.1 2.7E+02 0.0091 23.5 8.2 108 411-531 7-124 (184)
172 1hdo_A Biliverdin IX beta redu 24.1 67 0.0023 27.9 4.2 33 66-108 4-36 (206)
173 2m1z_A LMO0427 protein; homolo 24.0 1.2E+02 0.0041 23.9 5.1 39 65-108 2-42 (106)
174 3gl9_A Response regulator; bet 23.9 2.5E+02 0.0085 21.6 10.9 105 413-530 4-120 (122)
175 3hly_A Flavodoxin-like domain; 23.8 95 0.0032 26.3 5.0 37 66-107 1-37 (161)
176 2g1u_A Hypothetical protein TM 23.6 89 0.003 26.1 4.7 34 64-108 18-51 (155)
177 3q9l_A Septum site-determining 23.2 1.3E+02 0.0044 27.4 6.2 30 82-111 14-43 (260)
178 1ys7_A Transcriptional regulat 23.2 3.8E+02 0.013 23.4 13.9 112 411-532 7-125 (233)
179 3vps_A TUNA, NAD-dependent epi 23.2 61 0.0021 30.7 4.0 34 65-108 7-40 (321)
180 3av3_A Phosphoribosylglycinami 23.1 2.2E+02 0.0077 25.4 7.5 35 65-108 3-39 (212)
181 4fyk_A Deoxyribonucleoside 5'- 23.0 88 0.003 26.5 4.4 92 383-485 3-99 (152)
182 3fwz_A Inner membrane protein 22.9 48 0.0016 27.3 2.8 25 84-108 15-39 (140)
183 3tem_A Ribosyldihydronicotinam 22.8 87 0.003 28.5 4.8 39 65-107 1-40 (228)
184 3dm5_A SRP54, signal recogniti 22.7 6E+02 0.02 25.6 13.5 96 460-565 244-341 (443)
185 2qv0_A Protein MRKE; structura 22.7 2.8E+02 0.0097 21.8 12.2 112 411-533 9-128 (143)
186 1dih_A Dihydrodipicolinate red 22.5 29 0.001 32.8 1.5 61 452-517 68-128 (273)
187 1g3q_A MIND ATPase, cell divis 22.5 1.5E+02 0.005 26.5 6.4 30 82-111 14-43 (237)
188 2c20_A UDP-glucose 4-epimerase 22.4 68 0.0023 30.6 4.2 24 81-107 10-33 (330)
189 3m2p_A UDP-N-acetylglucosamine 22.1 73 0.0025 30.1 4.3 33 66-108 3-35 (311)
190 1kjq_A GART 2, phosphoribosylg 22.1 76 0.0026 31.3 4.6 39 59-108 5-43 (391)
191 3kcn_A Adenylate cyclase homol 22.0 3.1E+02 0.01 22.0 12.4 108 411-532 4-123 (151)
192 3hdv_A Response regulator; PSI 22.0 2.8E+02 0.0097 21.5 11.7 108 411-531 7-126 (136)
193 3la6_A Tyrosine-protein kinase 22.0 1.5E+02 0.005 28.0 6.4 44 64-111 90-133 (286)
194 1f0y_A HCDH, L-3-hydroxyacyl-C 21.8 70 0.0024 30.4 4.1 38 59-107 9-46 (302)
195 3ko8_A NAD-dependent epimerase 21.8 65 0.0022 30.4 3.9 24 81-107 9-32 (312)
196 2pzm_A Putative nucleotide sug 21.5 66 0.0023 30.8 3.9 34 64-107 19-52 (330)
197 2khz_A C-MYC-responsive protei 21.3 93 0.0032 26.7 4.4 34 452-486 73-109 (165)
198 3b6i_A Flavoprotein WRBA; flav 21.3 1E+02 0.0035 26.8 4.9 38 66-108 2-40 (198)
199 3bq9_A Predicted rossmann fold 21.3 6.5E+02 0.022 25.4 12.0 76 452-531 241-331 (460)
200 3kl4_A SRP54, signal recogniti 21.3 3.4E+02 0.012 27.3 9.2 79 476-565 261-341 (433)
201 3ujp_A Mn transporter subunit; 21.2 1.5E+02 0.0052 28.3 6.3 88 452-546 76-164 (307)
202 1id1_A Putative potassium chan 21.1 55 0.0019 27.3 2.8 24 85-108 12-35 (153)
203 3g0o_A 3-hydroxyisobutyrate de 21.1 68 0.0023 30.5 3.8 32 64-106 6-37 (303)
204 2qzj_A Two-component response 21.0 3E+02 0.01 21.5 11.0 109 411-532 4-121 (136)
205 2pv7_A T-protein [includes: ch 20.8 63 0.0022 30.7 3.5 32 66-107 22-53 (298)
206 3uuw_A Putative oxidoreductase 20.7 1.7E+02 0.0057 27.6 6.6 93 381-487 5-97 (308)
207 1p2f_A Response regulator; DRR 20.7 3.2E+02 0.011 23.7 8.3 71 452-532 39-117 (220)
208 1ydg_A Trp repressor binding p 20.7 1.2E+02 0.0042 26.7 5.3 39 64-107 5-43 (211)
209 3of5_A Dethiobiotin synthetase 20.6 1.5E+02 0.005 26.9 5.8 38 65-106 3-40 (228)
210 2vzf_A NADH-dependent FMN redu 20.5 1.1E+02 0.0037 26.9 4.8 40 65-107 2-42 (197)
211 3c97_A Signal transduction his 20.5 3.1E+02 0.011 21.5 13.0 66 456-531 54-129 (140)
212 2zki_A 199AA long hypothetical 20.2 1E+02 0.0034 26.9 4.6 37 65-107 4-40 (199)
213 1pvv_A Otcase, ornithine carba 20.2 76 0.0026 30.6 3.8 35 64-108 154-188 (315)
214 2ark_A Flavodoxin; FMN, struct 20.1 1.1E+02 0.0038 26.5 4.7 38 65-107 4-42 (188)
215 1hyq_A MIND, cell division inh 20.0 1.7E+02 0.0058 26.7 6.3 29 82-110 14-42 (263)
No 1
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=100.00 E-value=3.8e-64 Score=542.60 Aligned_cols=485 Identities=41% Similarity=0.685 Sum_probs=390.8
Q ss_pred ccCCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEE
Q 008154 61 QTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEI 140 (576)
Q Consensus 61 ~~~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (576)
.....|||+|+|+|+.|++++||++.+++.|+++|+++||+|.||+|.|++-. +..+......+.+.++...+
T Consensus 5 ~~~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~~~~-------~~~~~~~~~~~~~~~~~~~~ 77 (536)
T 3vue_A 5 HHHHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYK-------DAWDTSVVAEIKVADRYERV 77 (536)
T ss_dssp ---CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCSCCT-------TCEEEEEEEEEEETTEEEEE
T ss_pred cCCCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCchhhh-------hhcccceEEEEEecCceEEE
Confidence 34567999999999999989999999999999999999999999999997632 22333445667777888888
Q ss_pred EEEEeeecCeEEEEecCCCCCCC------CCCCCCCC-CCCCchHHHHHHHHHHHHhhcccCCCCC-----CCCCCccEE
Q 008154 141 AFFHEYREGVDWVFVDHPSYHRP------GNPYGDIN-GAFGDNQFRYTLLCYAACEAPLVLPLGG-----FTYGEKCIF 208 (576)
Q Consensus 141 ~~~~~~~~gv~v~~l~~~~~~~~------~~~y~~~~-~~~~~~~~r~~~~~~~~~~~~~~~~~~~-----~~~~~pDVv 208 (576)
++++...+|+++|+++++.+..+ ..+|++.. .+|.|+..||.+|+.++.++...++... .....|||+
T Consensus 78 ~~~~~~~~gv~~y~id~~~~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~~~~~~~~~ddIi 157 (536)
T 3vue_A 78 RFFHCYKRGVDRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVF 157 (536)
T ss_dssp EEEECEETTEEEEEEECTTTTCC------------------CHHHHHHHHHHHHHHHHHHHCCCCCCTTCCSCCCSCEEE
T ss_pred EEEEEEECCceEEEecChhhhccccccCCCcccCCCccCccchHHHHHHHHHHHHHHHHHHhccccchhhhccCCCCEEE
Confidence 99999999999999998876543 45777544 3788999999999999998876654321 112367899
Q ss_pred EeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccch
Q 008154 209 LVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVN 288 (576)
Q Consensus 209 H~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (576)
|+|+||+++++.+++......+...++|+|+|+|++.+++.++...+...+.+......... +.......+...+|
T Consensus 158 H~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~n 233 (536)
T 3vue_A 158 VCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDF----IDGYDTPVEGRKIN 233 (536)
T ss_dssp EEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEE----EETTTSTTCEEEEE
T ss_pred EECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhh----hhcccccccccchh
Confidence 99999999999999887765555568999999999999999988887777766544322110 00111222355689
Q ss_pred hHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCC-cccchHhH
Q 008154 289 VLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDD-LSGKVQCK 367 (576)
Q Consensus 289 ~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~-~~~~~~~~ 367 (576)
+++.++..||.|++||+.+++++.+. ++.++.........++.+|+||||.+.|.|.....+..+|.... ...+..++
T Consensus 234 ~~k~~i~~ad~v~tVS~~~a~ei~~~-~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k 312 (536)
T 3vue_A 234 WMKAGILEADRVLTVSPYYAEELISG-IARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNK 312 (536)
T ss_dssp HHHHHHHHCSEEEESCHHHHHHHHTT-CCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHH
T ss_pred HHHHHHHhccEEEEcCHHHhhhhhcc-cccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHH
Confidence 99999999999999999999998653 22222222233466899999999999999988777777776653 45678889
Q ss_pred HHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCCh
Q 008154 368 IALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNV 447 (576)
Q Consensus 368 ~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (576)
..+++.+|++.+++.++|+|+||+.++||++.|++|+++|.+++.+++++|.|++......+........++.+...++.
T Consensus 313 ~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~ 392 (536)
T 3vue_A 313 EALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNA 392 (536)
T ss_dssp HHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCH
T ss_pred HHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccH
Confidence 99999999998889999999999999999999999999998889999999999877777777777778888888888888
Q ss_pred hHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCccee----------EeCCC
Q 008154 448 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGW----------SFLPL 517 (576)
Q Consensus 448 ~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~----------~~~~~ 517 (576)
++...+|++||++|+||++|+||++++|||+||+|||+|+.||.+|.+.+ ++||+ ++++.
T Consensus 393 ~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~d----------g~~G~~~~~~~~~g~l~~~~ 462 (536)
T 3vue_A 393 PLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIE----------GKTGFHMGRLSVDCKVVEPS 462 (536)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEEECSCTHHHHHCCB----------TTTEEECCCCCSCTTCCCHH
T ss_pred HHHHHHHHhhheeecccccCCCCHHHHHHHHcCCCEEEcCCCCchheeeC----------CCCccccccCCCceeEECCC
Confidence 88889999999999999999999999999999999999999999999998 88887 56777
Q ss_pred CHHHHHHHHHHHHHHhhhCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhh
Q 008154 518 SEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWAS 569 (576)
Q Consensus 518 d~~~la~~i~~~l~~~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y~~~~ 569 (576)
|+++++++|.+++..+ +.+.|.+++++++++.|||++++++|.++|+++.
T Consensus 463 d~~~la~ai~ral~~~--~~~~~~~~~~~am~~~fSW~~~A~~y~~ly~~L~ 512 (536)
T 3vue_A 463 DVKKVAATLKRAIKVV--GTPAYEEMVRNCMNQDLSWKGPAKNWENVLLGLG 512 (536)
T ss_dssp HHHHHHHHHHHHHHHT--TSHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhc--CcHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhh
Confidence 8999999999998754 4456899999999999999999999999999863
No 2
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=100.00 E-value=5.2e-48 Score=415.08 Aligned_cols=469 Identities=35% Similarity=0.578 Sum_probs=336.2
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 145 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (576)
|||++++.+++|....||+++++.+++++|+++||+|+|+++.++... ..+.. ..........-+ ....+.+.
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~---~~~~~---~~~~~~~~~~~~-~~~~~~~~ 73 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVK---AAVTD---PVKCFEFTDLLG-EKADLLEV 73 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHH---HHCCS---CEEEEEESCSSS-CCEEEEEE
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEeccccccc---ccccc---cceeEEEEEecC-CeEEEEEE
Confidence 899999999888434799999999999999999999999998653210 00000 000000000000 01223334
Q ss_pred eecCeEEEEecCCCC-CCCCCCCCCC-CCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHH
Q 008154 146 YREGVDWVFVDHPSY-HRPGNPYGDI-NGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLA 223 (576)
Q Consensus 146 ~~~gv~v~~l~~~~~-~~~~~~y~~~-~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~ 223 (576)
..+|+++++++.+.+ .+...+|+.. ..+|.++..++..+...+.+.++.+- ...+|||||+|++.+++.+.+++
T Consensus 74 ~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~DiIh~~~~~~~~~~~~~~ 149 (485)
T 1rzu_A 74 QHERLDLLILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVL----PGWRPDMVHAHDWQAAMTPVYMR 149 (485)
T ss_dssp EETTEEEEEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCS----SSCCCSEEEEEHHHHTTHHHHHH
T ss_pred EecCceEEEEeChHHhCCCccccCCcccccccchHHHHHHHHHHHHHHHHHhc----cCCCCCEEEecccchhHHHHHHh
Confidence 458999999875432 1111234321 12344566677666666655554320 11279999999988777777666
Q ss_pred hhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceecc
Q 008154 224 SKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTV 303 (576)
Q Consensus 224 ~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~v 303 (576)
.... .++|+|+|+|+..+.+.++...+..++++...+......+ .....+++.+++.||.++++
T Consensus 150 ~~~~-----~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~ad~vi~~ 213 (485)
T 1rzu_A 150 YAET-----PEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEY-----------YNDVSFLKGGLQTATALSTV 213 (485)
T ss_dssp HSSS-----CCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEE-----------TTEEEHHHHHHHHCSEEEES
T ss_pred hccc-----CCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccc-----------cccccHHHHHHhhcCEEEec
Confidence 5311 4789999999986655554444444444433322110000 11235778899999999999
Q ss_pred CccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCC
Q 008154 304 SKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCP 383 (576)
Q Consensus 304 S~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 383 (576)
|+.+++.+.+..++.++...+.....++.+||||+|.+.|.+.....+...|...+..++..++..+++.+|++.+ +.+
T Consensus 214 S~~~~~~~~~~~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~ 292 (485)
T 1rzu_A 214 SPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDD-GSP 292 (485)
T ss_dssp CHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCS-SSC
T ss_pred CHhHHHHHhccccCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhcCCCCC-CCe
Confidence 9998887743111111222233456789999999999988877654444556656666777778889999999832 256
Q ss_pred EEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEeC
Q 008154 384 LIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMP 463 (576)
Q Consensus 384 ~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~p 463 (576)
+|+|+||+.+.||++.+++|++.+.+++++|+|+|+|++.+.+.++.+.+....++..+.+++.+.+..+|+.||++|+|
T Consensus 293 ~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv~v~p 372 (485)
T 1rzu_A 293 LFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIP 372 (485)
T ss_dssp EEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCSEEEEC
T ss_pred EEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCchHHHHHHHHHHHhCCCcEEEecCCCHHHHHHHHhcCCEEEEC
Confidence 99999999999999999999999977799999999997545555555555555677767888777777899999999999
Q ss_pred CCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCC---------cceeEeCCCCHHHHHHHHHHHHHHhh
Q 008154 464 SRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGE---------GTGWSFLPLSEESMLTALRFAIRTYR 534 (576)
Q Consensus 464 s~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~---------~~G~~~~~~d~~~la~~i~~~l~~~~ 534 (576)
|.+|+||++++|||+||+|||+|+.||..|++.+ + .+|++++++|+++++++|.+++..+
T Consensus 373 S~~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~----------~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~- 441 (485)
T 1rzu_A 373 SRFEPCGLTQLYALRYGCIPVVARTGGLADTVID----------ANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYY- 441 (485)
T ss_dssp CSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCB----------CCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHH-
T ss_pred cccCCCCHHHHHHHHCCCCEEEeCCCChhheecc----------cccccccccCCcceEeCCCCHHHHHHHHHHHHHHh-
Confidence 9999999999999999999999999999999988 7 8999999999999999999998422
Q ss_pred hCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhhCCC
Q 008154 535 EHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASIDPP 573 (576)
Q Consensus 535 ~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y~~~~~~~~ 573 (576)
+|++.+.++++++.+++|||++++++|.++|++++++.+
T Consensus 442 ~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~~~~~~~ 480 (485)
T 1rzu_A 442 HDPKLWTQMQKLGMKSDVSWEKSAGLYAALYSQLISKGH 480 (485)
T ss_dssp TCHHHHHHHHHHHHTCCCBHHHHHHHHHHHHHHHTC---
T ss_pred CCHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHhhCCCC
Confidence 488999999999888899999999999999999987654
No 3
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=100.00 E-value=7.9e-48 Score=413.66 Aligned_cols=467 Identities=34% Similarity=0.584 Sum_probs=331.1
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 145 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (576)
|||++++.+++|....||+++++.+++++|+++||+|+|+++.++... ..+. +..........+. ...+...
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~---~~~~---~~~~~~~~~~~~~--~~~~~~~ 72 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIR---RGVT---DAQVVSRRDTFAG--HITLLFG 72 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECCHHHH---HHCT---TCEEEEEECCTTC--CEEEEEE
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCccccc---cccc---cceeEEEecccCC--cEEEEEE
Confidence 899999999888535799999999999999999999999998642210 0000 0000000000000 1122233
Q ss_pred eecCeEEEEecCCCCCCCCC-CCCCCC-CCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHH
Q 008154 146 YREGVDWVFVDHPSYHRPGN-PYGDIN-GAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLA 223 (576)
Q Consensus 146 ~~~gv~v~~l~~~~~~~~~~-~y~~~~-~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~ 223 (576)
..+|+++++++.+.+..+.. +|+... .+|.++..++..+...+.+.++.+.. ..+|||||+|++.+++++.+++
T Consensus 73 ~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~Divh~~~~~~~~~~~~~~ 148 (485)
T 2qzs_A 73 HYNGVGIYLIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDP----FWRPDVVHAHDWHAGLAPAYLA 148 (485)
T ss_dssp EETTEEEEEEECHHHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSST----TCCCSEEEEETGGGTTHHHHHH
T ss_pred EECCcEEEEEeChhhccCCCCccCCcccCCCCchHHHHHHHHHHHHHHHHHhcc----CCCCCEEEeeccchhHHHHHHh
Confidence 35789999987543211111 343211 12345556666666666665543210 1279999999988877776665
Q ss_pred hhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceecc
Q 008154 224 SKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTV 303 (576)
Q Consensus 224 ~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~v 303 (576)
.+. .++|+|+|.|+..+.+.++...+..++++...+...... ......+++.+++.||.++++
T Consensus 149 ~~~------~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~ad~vi~~ 211 (485)
T 2qzs_A 149 ARG------RPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLE-----------FNGQISFLKAGLYYADHITAV 211 (485)
T ss_dssp HTT------CSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTE-----------ETTEEEHHHHHHHHCSEEEES
T ss_pred hcc------CCCCEEEEecCccccCCCCHHHHHhcCCCchhccccccc-----------ccccccHHHHHHHhcCeEEec
Confidence 322 579999999998655444333333334333322110000 011235778889999999999
Q ss_pred CccchhhhccccCCcchhhhhhccC--CceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCC
Q 008154 304 SKGYSWEITTVEGGYGLHEILSSRK--SVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPD 381 (576)
Q Consensus 304 S~~~~~~~~~~~~~~~l~~~~~~~~--~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 381 (576)
|+.+++.+....++.++...+.... .++.+||||+|.+.|.+.....+..+|...+..++..++..+++.+|++.+++
T Consensus 212 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 291 (485)
T 2qzs_A 212 SPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDK 291 (485)
T ss_dssp SHHHHHHTTSHHHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHHTCCCCTT
T ss_pred CHHHHHHHhccccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHHHcCCCCCCC
Confidence 9998877642101110111111123 68999999999998887665545555666666677777888999999985447
Q ss_pred CCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEE
Q 008154 382 CPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILL 461 (576)
Q Consensus 382 ~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v 461 (576)
.++|+|+||+.+.||++.+++|++.+.+++++|+|+|+|++...+.++.+.+....++..+.+++.+.+..+|+.||++|
T Consensus 292 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv~v 371 (485)
T 2qzs_A 292 VPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVIL 371 (485)
T ss_dssp SCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEECHHHHHHHHHHHHHSTTTEEEEESCCHHHHHHHHHHCSEEE
T ss_pred CeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCchHHHHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHhCCEEE
Confidence 79999999999999999999999999777999999999975445555555555556776678887777678999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCC---------cceeEeCCCCHHHHHHHHHHHHHH
Q 008154 462 MPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGE---------GTGWSFLPLSEESMLTALRFAIRT 532 (576)
Q Consensus 462 ~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~---------~~G~~~~~~d~~~la~~i~~~l~~ 532 (576)
+||.+|+||++++||||||+|||+|+.||..|++.+ + .+|++++++|+++++++|.+++..
T Consensus 372 ~pS~~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~----------~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~ 441 (485)
T 2qzs_A 372 VPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD----------CSLENLADGVASGFVFEDSNAWSLLRAIRRAFVL 441 (485)
T ss_dssp ECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCB----------CCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHH
T ss_pred ECCccCCCcHHHHHHHHCCCCEEECCCCCccceecc----------CccccccccccceEEECCCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999988 6 899999999999999999999843
Q ss_pred hhhCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhhCC
Q 008154 533 YREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASIDP 572 (576)
Q Consensus 533 ~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y~~~~~~~ 572 (576)
+ +|++.+.++++++.+++|||++++++|.++|++++.+.
T Consensus 442 ~-~~~~~~~~~~~~~~~~~fs~~~~~~~~~~ly~~~~~~~ 480 (485)
T 2qzs_A 442 W-SRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLKLEH 480 (485)
T ss_dssp H-TSHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC---
T ss_pred c-CCHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHhhhhh
Confidence 2 48889999999988889999999999999999987644
No 4
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=100.00 E-value=6.4e-45 Score=385.00 Aligned_cols=424 Identities=24% Similarity=0.359 Sum_probs=320.2
Q ss_pred CCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEE
Q 008154 64 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFF 143 (576)
Q Consensus 64 ~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (576)
++|||++++.+++| ...||+++++.+++++|+++||+|+++++.++..... . ...+.+ .+.....+++
T Consensus 1 r~MkIl~v~~~~~p-~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~--~-------~~~~~~--~~~~~~~~~~ 68 (439)
T 3fro_A 1 RHMKVLLLGFEFLP-VKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGE--E-------IGKIRV--FGEEVQVKVS 68 (439)
T ss_dssp CCCEEEEECSCCTT-SCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCE--E-------EEEEEE--TTEEEEEEEE
T ss_pred CceEEEEEecccCC-cccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhh--h-------hccccc--cCcccceeee
Confidence 46999999999888 5689999999999999999999999999887553211 0 111122 3344555666
Q ss_pred EeeecCeEEEEecCCCCCCCCCCCCCCCCCCCch-HHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHH
Q 008154 144 HEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDN-QFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLL 222 (576)
Q Consensus 144 ~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l 222 (576)
....+|+++++++. .+..+..+|+. +.++ ..++..+.....+.++.+-.. ..+|||||+|++..++.+.++
T Consensus 69 ~~~~~gv~v~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~Dii~~~~~~~~~~~~~~ 140 (439)
T 3fro_A 69 YEERGNLRIYRIGG-GLLDSEDVYGP----GWDGLIRKAVTFGRASVLLLNDLLRE---EPLPDVVHFHDWHTVFAGALI 140 (439)
T ss_dssp EEEETTEEEEEEES-GGGGCSSTTCS----HHHHHHHHHHHHHHHHHHHHHHHTTT---SCCCSEEEEESGGGHHHHHHH
T ss_pred eccCCCceEEEecc-hhccccccccC----CcchhhhhhHHHHHHHHHHHHHHhcc---CCCCeEEEecchhhhhhHHHH
Confidence 66789999999987 33333345542 2244 556666666666655443100 127999999999888777777
Q ss_pred HhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceec
Q 008154 223 ASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLT 302 (576)
Q Consensus 223 ~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~ 302 (576)
++. .++|+|+|+|+...... +........+.. ........+++.+++.||.+++
T Consensus 141 ~~~-------~~~~~v~~~h~~~~~~~-~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~ad~ii~ 194 (439)
T 3fro_A 141 KKY-------FKIPAVFTIHRLNKSKL-PAFYFHEAGLSE------------------LAPYPDIDPEHTGGYIADIVTT 194 (439)
T ss_dssp HHH-------HCCCEEEEESCCCCCCE-EHHHHHHTTCGG------------------GCCSSEECHHHHHHHHCSEEEE
T ss_pred hhc-------cCCCEEEEecccccccC-chHHhCcccccc------------------ccccceeeHhhhhhhhccEEEe
Confidence 643 47999999998743221 111111000000 0012223688899999999999
Q ss_pred cCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCC
Q 008154 303 VSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDC 382 (576)
Q Consensus 303 vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 382 (576)
+|+.+.+.. .+.+.....++.+||||+|.+.|.+.... ..+...+..+++.++++ ++
T Consensus 195 ~S~~~~~~~---------~~~~~~~~~~i~vi~ngvd~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~--~~- 251 (439)
T 3fro_A 195 VSRGYLIDE---------WGFFRNFEGKITYVFNGIDCSFWNESYLT-----------GSRDERKKSLLSKFGMD--EG- 251 (439)
T ss_dssp SCHHHHHHT---------HHHHGGGTTSEEECCCCCCTTTSCGGGSC-----------SCHHHHHHHHHHHHTCC--SC-
T ss_pred cCHHHHHHH---------hhhhhhcCCceeecCCCCCchhcCccccc-----------chhhhhHHHHHHHcCCC--CC-
Confidence 999887653 33445678899999999999888765211 12344577889999987 45
Q ss_pred CEEEEecccc-cccCHHHHHHHHHhhhc----CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEcc-CChhHHHHHHhc
Q 008154 383 PLIGFIGRLD-YQKGIDLIRLAAPEILA----DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVG-FNVPISHRITAG 456 (576)
Q Consensus 383 ~~i~~~Gr~~-~~Kg~~~ll~a~~~L~~----~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ll~~ 456 (576)
++|+|+||+. +.||++.+++|++.+.+ ++++|+|+|+|++.+.+..+.+.+... +.+.+.+ .+.+.+..+++.
T Consensus 252 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~-~~~~~~g~~~~~~~~~~~~~ 330 (439)
T 3fro_A 252 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEMLSREFVRELYGS 330 (439)
T ss_dssp EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHHHHHHCT-TEEEECSCCCHHHHHHHHTT
T ss_pred cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCChhHHHHHHHHHhhcC-CEEEEcCCCCHHHHHHHHHH
Confidence 9999999999 99999999999999987 689999999998655566777766666 6666777 577777899999
Q ss_pred CCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhC
Q 008154 457 CDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREH 536 (576)
Q Consensus 457 ~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~ 536 (576)
||++|+||.+|++|++++||||||+|||+|+.|+..|++.+ + +|++++++|+++++++|.+++.. +
T Consensus 331 adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~----------~-~g~~~~~~d~~~la~~i~~ll~~---~ 396 (439)
T 3fro_A 331 VDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITN----------E-TGILVKAGDPGELANAILKALEL---S 396 (439)
T ss_dssp CSEEEECBSCCSSCHHHHHHHHTTCEEEEESSTHHHHHCCT----------T-TCEEECTTCHHHHHHHHHHHHHH---T
T ss_pred CCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCCCcceeEEc----------C-ceEEeCCCCHHHHHHHHHHHHhc---C
Confidence 99999999999999999999999999999999999999987 5 99999999999999999999862 5
Q ss_pred HHHHHHHHHHHH--hhhCCHHHHHHHHHHHHHHhhhC
Q 008154 537 KSSWEGLMRRGM--EKDYTWENAAIQYEQVFEWASID 571 (576)
Q Consensus 537 ~~~~~~~~~~a~--~~~fs~~~~~~~y~~~y~~~~~~ 571 (576)
++.+.++++++. .++|||+.++++|.++|++++++
T Consensus 397 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 433 (439)
T 3fro_A 397 RSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSIDR 433 (439)
T ss_dssp TTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCSCC
T ss_pred HHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHh
Confidence 667777777773 37899999999999999998764
No 5
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=100.00 E-value=1.5e-44 Score=383.46 Aligned_cols=449 Identities=13% Similarity=0.135 Sum_probs=307.7
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHh-CCCcEEEEEecCCCCCCcccchhcccc--Cc----------eeEEEee
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAA-RGHRVMVVSPRYFNGTAADENFTLAKD--LG----------CCMKICC 133 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~-~G~~V~vi~~~~~~~~~~~~~~~~~~~--~~----------~~~~~~~ 133 (576)
-++.+|||.++ ++||+.+++..-|+.+.+ .|.+..+|||..++.. . ..++.... .. .+++ ..
T Consensus 29 ~lfE~swEV~N--kVGGIyTVl~tka~~~~~~~gd~y~~iGP~~~~~~-~-~e~e~~~~~~~~~~~~~~~~~~~~~~-~~ 103 (725)
T 3nb0_A 29 LLFETATEVAN--RVGGIYSVLKSKAPITVAQYKDHYHLIGPLNKATY-Q-NEVDILDWKKPEAFSDEMRPVQHALQ-TM 103 (725)
T ss_dssp EEEEEETTTTS--CSSHHHHHHHHHHHHHHHHHGGGEEEEEECCTTTH-H-HHEEECCSSSGGGSCSTTHHHHHHHH-HH
T ss_pred eEEeeehhhhc--ccCCeEEEEecchhHHHHHhCCeEEEECCCCCCcC-C-cceeecCCCCchhhcchhHHHHHHHH-HH
Confidence 49999999998 699999999999999999 7999999999643322 1 11111110 00 0110 12
Q ss_pred cCCeeEEEEEEeeecC-eEEEEecCCCC-CCCCCCCCCCC-----------CCCCchHHHHHHHHHHHHhhcccCCCCCC
Q 008154 134 FGGEQEIAFFHEYREG-VDWVFVDHPSY-HRPGNPYGDIN-----------GAFGDNQFRYTLLCYAACEAPLVLPLGGF 200 (576)
Q Consensus 134 ~~~~~~~~~~~~~~~g-v~v~~l~~~~~-~~~~~~y~~~~-----------~~~~~~~~r~~~~~~~~~~~~~~~~~~~~ 200 (576)
..+++.+++++|.|+| +.++++|..++ ....++++..| ++| ++..+|.+++.++++.+..+. .+
T Consensus 104 ~~~G~~v~~GrW~i~G~P~viL~d~~~~~~~~~~~~~~lw~~~~i~s~~~yg~~-dd~~~F~y~~~avl~~l~~~~--~~ 180 (725)
T 3nb0_A 104 ESRGVHFVYGRWLIEGAPKVILFDLDSVRGYSNEWKGDLWSLVGIPSPENDFET-NDAILLGYTVAWFLGEVAHLD--SQ 180 (725)
T ss_dssp HTTTCCEEEEEESSTTCCEEEEECSGGGGGGHHHHHHHHHHHHCCCCCSSCHHH-HHHHHHHHHHHHHHHHHHHHC--CS
T ss_pred HHCCCeEEEEEEecCCCceEEEEeChHHHHHHHHHHHHHHHHhCcCCCCcccch-hHHHHHHHHHHHHHHHHHhcC--CC
Confidence 4567888999999998 77888884432 22222332222 234 678899999999998876542 23
Q ss_pred CCCCccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCC------CCCCCChhh-hhhcCCChhhhcccccccc
Q 008154 201 TYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLS------HQGVEPAAT-YKNLGLPSEWYGALEWVFP 273 (576)
Q Consensus 201 ~~~~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 273 (576)
+|||+|+|||++++++.+++.+. +++++|||+|++. +++.++... +..++.+.....
T Consensus 181 ---~pdIiH~HDW~tg~~~~~Lk~~~------~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~------- 244 (725)
T 3nb0_A 181 ---HAIVAHFHEWLAGVALPLCRKRR------IDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGR------- 244 (725)
T ss_dssp ---EEEEEEEESGGGCTHHHHHHHTT------CSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHH-------
T ss_pred ---CCcEEEeCchhhhHHHHHHHHhC------CCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhh-------
Confidence 69999999999999999998765 6899999999983 134332111 122222111100
Q ss_pred cccccccCCcCccchhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccc
Q 008154 274 TWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIAS 353 (576)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~ 353 (576)
.......++++.++..||+|++||+.+++++.+ ++..+...+ ||||||++.|.|...
T Consensus 245 -------~~i~~~~~~EKaga~~AD~ITTVS~~yA~Ei~~---------Ll~r~~d~i--IpNGID~~~f~p~~~----- 301 (725)
T 3nb0_A 245 -------FGIYHRYCIERAAAHSADVFTTVSQITAFEAEH---------LLKRKPDGI--LPNGLNVIKFQAFHE----- 301 (725)
T ss_dssp -------TTCHHHHHHHHHHHHHSSEEEESSHHHHHHHHH---------HTSSCCSEE--CCCCBCCCCCSSTTH-----
T ss_pred -------hchhHHHHHHHHHHHhCCEEEECCHHHHHHHHH---------HhcCCCCEE--EcCCccccccCcchh-----
Confidence 001234689999999999999999999999852 445555544 999999999987521
Q ss_pred cCCcCCcccchHhHHHHHHHc------CCCCC-CCCCEEEEecccc-cccCHHHHHHHHHhhhc----C-----CcEEEE
Q 008154 354 HYSIDDLSGKVQCKIALQKEL------GLPIR-PDCPLIGFIGRLD-YQKGIDLIRLAAPEILA----D-----DIQFVM 416 (576)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~------~i~~~-~~~~~i~~~Gr~~-~~Kg~~~ll~a~~~L~~----~-----~~~lii 416 (576)
.+..+..++..+++.+ +++.+ ++.++++.+||++ .+||++++++|+.+|.. . -+.|+|
T Consensus 302 -----~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii 376 (725)
T 3nb0_A 302 -----FQNLHALKKEKINDFVRGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIV 376 (725)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHTTTCCCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEE
T ss_pred -----hHHHHHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEE
Confidence 1122334444444432 33332 3456677789999 79999999999999863 1 267777
Q ss_pred EeCCChhh-------------------------------------------------HH---------------------
Q 008154 417 LGSGDPQF-------------------------------------------------ES--------------------- 426 (576)
Q Consensus 417 ~G~g~~~~-------------------------------------------------~~--------------------- 426 (576)
+..+.... ++
T Consensus 377 ~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~ 456 (725)
T 3nb0_A 377 MPAKNNSFTVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPE 456 (725)
T ss_dssp CCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCT
T ss_pred eCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCC
Confidence 76552110 00
Q ss_pred ------------------HHHHHHHH-------hcCceEEEccCChh-------HHHHHHhcCCEEEeCCCCCCCcHHHH
Q 008154 427 ------------------WMRDTEAT-------YKDKYRGWVGFNVP-------ISHRITAGCDILLMPSRFEPCGLNQL 474 (576)
Q Consensus 427 ------------------~~~~~~~~-------~~~~~~~~~~~~~~-------~~~~ll~~~Dv~v~ps~~E~~g~s~l 474 (576)
....+++. .++++++..+|-.. ....++++||++|+||++|+||++++
T Consensus 457 ~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~L 536 (725)
T 3nb0_A 457 GQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPA 536 (725)
T ss_dssp TCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHH
T ss_pred CCCCCeeeeecccCCccHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHH
Confidence 00000100 01235555555222 25679999999999999999999999
Q ss_pred HHHHcCCceEEeCccccccccccccccccCCCCCcceeEeC---CCCHHHHHHHHHHHHHHhhh-CHHHHHHHHHHH--H
Q 008154 475 YAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFL---PLSEESMLTALRFAIRTYRE-HKSSWEGLMRRG--M 548 (576)
Q Consensus 475 EAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~---~~d~~~la~~i~~~l~~~~~-~~~~~~~~~~~a--~ 548 (576)
||||||+|||+|+.||+.|++.+..... +.+.+|+++. +.|+++++++|.+++..+.+ ++..+.++++++ +
T Consensus 537 EAmA~G~PvI~s~~gG~~d~V~dg~~~~---~~~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~ 613 (725)
T 3nb0_A 537 ECTVMGVPSITTNVSGFGSYMEDLIETN---QAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEAL 613 (725)
T ss_dssp HHHHTTCCEEEETTBHHHHHHHTTSCHH---HHHHTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHG
T ss_pred HHHHcCCCEEEeCCCChhhhhhcccccc---CCCCceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 9999999999999999999998711000 0014799884 45789999999999886654 677777887776 5
Q ss_pred hhhCCHHHHHHHHHHHHHHhhh
Q 008154 549 EKDYTWENAAIQYEQVFEWASI 570 (576)
Q Consensus 549 ~~~fs~~~~~~~y~~~y~~~~~ 570 (576)
+++|+|++++++|+++|+.++.
T Consensus 614 A~~FSWe~iA~~Yl~~Ye~aL~ 635 (725)
T 3nb0_A 614 SDLLDWKRMGLEYVKARQLALR 635 (725)
T ss_dssp GGGGBHHHHHHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHHHHh
Confidence 6799999999999999999874
No 6
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=100.00 E-value=8.6e-43 Score=375.83 Aligned_cols=470 Identities=14% Similarity=0.047 Sum_probs=325.2
Q ss_pred cccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccC------------------ceeEEEeecCC----
Q 008154 79 SKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDL------------------GCCMKICCFGG---- 136 (576)
Q Consensus 79 ~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~---- 136 (576)
.++||+|+++.++.++++++|.+.+.+|..|..|.+.+.. .+.++. ...+.|.+.|+
T Consensus 111 LgnGGLGrLAac~ldS~a~l~~p~~G~Gl~Y~~G~F~Q~i-~dG~Q~E~~d~wl~~g~pwe~~r~~~~~~V~f~g~~v~a 189 (796)
T 2c4m_A 111 LGNGGLGRLAACFLDSAVTQDYPVTGYGLLYRFGLFRQSF-NEGFQVEKPDPWREEEYPFTIRRASDQLVVCFDDMKTRA 189 (796)
T ss_dssp CCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEE-ETTEEEEECCCSSSSCCTTSEECGGGCEEEEETTEEEEE
T ss_pred cCCCcHHHHHHHHHHHHHhCCCCeEEEeecccCCCeEEEe-eCCEEEeeCCccccCCCceeEecCCcEEEEEeCCEEEEE
Confidence 4899999999999999999999999999999999765443 222211 11233333332
Q ss_pred --------------eeEEEEEEeeecCeEEEEec---CCC---------CCC--CCCCCCCCCCCCCchHHHH---HHHH
Q 008154 137 --------------EQEIAFFHEYREGVDWVFVD---HPS---------YHR--PGNPYGDINGAFGDNQFRY---TLLC 185 (576)
Q Consensus 137 --------------~~~~~~~~~~~~gv~v~~l~---~~~---------~~~--~~~~y~~~~~~~~~~~~r~---~~~~ 185 (576)
...+|+|...++. .+.++ ... ..+ +..+|++-. .+...+.|+ .+|+
T Consensus 190 ~~yd~pi~gy~~~~~n~lrlW~a~~~~--~f~l~~fn~gdy~~a~~~~~~~~~It~~LYp~D~-~~~Gk~lRL~Qe~ff~ 266 (796)
T 2c4m_A 190 IPYDMPITGYGTHNVGTLRLWKAEPWE--EFDYDAFNAQRFTDAIIERERVSDICRVLYPNDT-TYEGKKLRVRQQYFFT 266 (796)
T ss_dssp EEEEEEECCTTCCCCEEEEEEEEEESS--SSCHHHHHTTCHHHHHHHHHHHHHHHHSSSCCCS-SHHHHHHHHHHHHHHH
T ss_pred EEEeccccCcCCCceEEEEEEeccccc--ccchhhccCcchhhhhhchHhhhchhhcCcCCCC-CcchHHHHHHhHHHHH
Confidence 3344455544333 11111 000 011 345888610 000147777 6777
Q ss_pred HHHHhh-cccC-----CCCCCCCCCccEEEeCCCccchHHH-HHHhhc----cCCCCC---CCCcEEEEeecCCCCCC--
Q 008154 186 YAACEA-PLVL-----PLGGFTYGEKCIFLVNDWHAGLVPV-LLASKY----RPHGVY---KDARSILVIHNLSHQGV-- 249 (576)
Q Consensus 186 ~~~~~~-~~~~-----~~~~~~~~~pDVvH~~~~~~~~~~~-~l~~~~----~~~~~~---~~~~~v~t~H~~~~~~~-- 249 (576)
.++++. ++++ .+..+. +|||||+||||+++++. +++... .....+ .+..++||+||+.+++.
T Consensus 267 ~a~lq~ilr~~~~~~~~l~~l~--~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~ 344 (796)
T 2c4m_A 267 SASLQAMIQDHLAHHKDLSNFA--EFHSVQLNDTHPVLAIPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEALEQ 344 (796)
T ss_dssp HHHHHHHHHHHHHHSSCSTTHH--HHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSSTTSCE
T ss_pred HHHHHHHHHHHHHhCCChhhcC--CCeEEEeCCChHHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCchHHHhhh
Confidence 777774 4422 111121 69999999999999877 554321 011001 13578999999999986
Q ss_pred CChhhhhhcC---------CChhhhcccccc---cccccccccCCcCccchhHHHHHHhccceeccCccchhhhccccCC
Q 008154 250 EPAATYKNLG---------LPSEWYGALEWV---FPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGG 317 (576)
Q Consensus 250 ~~~~~~~~~~---------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~ 317 (576)
||.++++.+- ++..++...... ...+.+. .....+.++|.++|+..|+.|++||+.+.+.++++.++
T Consensus 345 wp~~l~~~~lpr~~~ii~~I~~~~~~~~~~~~~~~~~~~~~-~i~~~~~vnMa~lai~~S~~VNgVS~lHae~ik~~~f~ 423 (796)
T 2c4m_A 345 WDEQIFQQLFWRVWEIIAEIDRRFRLERAADGLDEETINRM-APIQHGTVHMAWIACYAAYSINGVAALHTEIIKAETLA 423 (796)
T ss_dssp EEHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHH-CSEETTEEEHHHHHHHHCSEEEESSHHHHHHHHHTTTH
T ss_pred CCHHHHHHHhHHHHHHHcCcCHHHHHHHHhcCCcHhhhhcc-cceeCCcccHHHHHHHhcCceeeccHHHHHHhhhhhhh
Confidence 8888774321 111111100000 0000010 01124479999999999999999999999999866654
Q ss_pred cchhhhhhccCCceeEecCCCCCCCCCC----CCCccccccCC-----------------cCC-------cccchHhHHH
Q 008154 318 YGLHEILSSRKSVLNGITNGIDITEWNP----SSDEHIASHYS-----------------IDD-------LSGKVQCKIA 369 (576)
Q Consensus 318 ~~l~~~~~~~~~~i~vi~nGvd~~~~~~----~~~~~l~~~~~-----------------~~~-------~~~~~~~~~~ 369 (576)
+.+...+.++..|+||||...|.. .-..-+...+. .++ |..+..++..
T Consensus 424 ----~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~ 499 (796)
T 2c4m_A 424 ----DWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQD 499 (796)
T ss_dssp ----HHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHH
T ss_pred ----hHHHcCccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHhhCCCHHHHHHHHHHHHHHHHH
Confidence 344556778999999999999943 21111111222 233 4556666766
Q ss_pred ----HHHHcCCCCCCCCCEEEEecccccccCHHH-HHHHHHhhhc---------CCcEEEEEeCCChhhHHHH------H
Q 008154 370 ----LQKELGLPIRPDCPLIGFIGRLDYQKGIDL-IRLAAPEILA---------DDIQFVMLGSGDPQFESWM------R 429 (576)
Q Consensus 370 ----~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~-ll~a~~~L~~---------~~~~lii~G~g~~~~~~~~------~ 429 (576)
+++..|++.+++.+++++++|+..+||+++ ++.++.++.+ .|+++||+|+++|.++..+ .
T Consensus 500 L~~~l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~i~ 579 (796)
T 2c4m_A 500 FAEWILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGYVRAKAIIKLIN 579 (796)
T ss_dssp HHHHHHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhHHHHHHHHHHHH
Confidence 588999998899999999999999999999 8999888753 4799999999998887773 3
Q ss_pred HHHH------HhcC--ceEEEccCChhHHHHHHhcCCEEEeCCC--CCCCcHHHHHHHHcCCceEEeCcccccccccccc
Q 008154 430 DTEA------TYKD--KYRGWVGFNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFN 499 (576)
Q Consensus 430 ~~~~------~~~~--~~~~~~~~~~~~~~~ll~~~Dv~v~ps~--~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~ 499 (576)
.+++ ..++ +++++++|+..+++.++++||++++||+ +|+||++.|.||.+|.++|++.+|++.|+....
T Consensus 580 ~va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~v- 658 (796)
T 2c4m_A 580 SIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGANVEIVDSV- 658 (796)
T ss_dssp HHHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTHHHHHHHHH-
T ss_pred HHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccCCeEeehhhhc-
Confidence 3444 4556 8999999999999999999999999999 999999999999999999999999999986441
Q ss_pred ccccCCCCCcceeEeCC--CCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhh
Q 008154 500 PFAREGSGEGTGWSFLP--LSEESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASI 570 (576)
Q Consensus 500 ~~~~~~~~~~~G~~~~~--~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y~~~~~ 570 (576)
+.+|||+|.. .++.++... ......+..++ .++++..+.+...|||+.- .+|.++|+.++.
T Consensus 659 -------G~~NgF~FG~~~~ev~~l~~~-y~a~~~y~~~~-~~~~vvd~~~~g~fs~~~~-~~y~~Ly~~L~~ 721 (796)
T 2c4m_A 659 -------GEENAYIFGARVEELPALRES-YKPYELYETVP-GLKRALDALDNGTLNDNNS-GLFYDLKHSLIH 721 (796)
T ss_dssp -------CGGGSEEESCCTTTHHHHHHT-CCHHHHHHHST-THHHHHHTTTSSSSCCTTC-CHHHHHHHHHHS
T ss_pred -------CCCcEEEecCchhhHHHHHHh-hChHHHhhcCH-HHHHHHHHHHcCCCCCCCH-HHHHHHHHHHHh
Confidence 1479999987 677776665 55555444566 6777777778889999877 789999999875
No 7
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=100.00 E-value=2.5e-41 Score=364.53 Aligned_cols=467 Identities=16% Similarity=0.135 Sum_probs=323.8
Q ss_pred ccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccC------------------ceeEEEee--------
Q 008154 80 KTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDL------------------GCCMKICC-------- 133 (576)
Q Consensus 80 ~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~-------- 133 (576)
++||+|+++.++.++++++|.+.+.+|..|..|.+.+.. .+.++. ...+.|.+
T Consensus 111 gnGGLGrLAacfldS~a~l~~p~~G~Gi~Y~~G~F~Q~i-~dG~Q~E~~d~wl~~~~pwe~~r~~~~~~V~f~g~~~~~~ 189 (796)
T 1l5w_A 111 GNGGLGRLAACFLDSMATVGQSATGYGLNYQYGLFRQSF-VDGKQVEAPDDWHRSNYPWFRHNEALDVQVGIGGKVTKDG 189 (796)
T ss_dssp CCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEE-ETTEEEEECCCCCGGGCTTCEECGGGCEEEEESCEECTTS
T ss_pred CCCcHHHHHHHHHHHHHhCCCCeEEEeeeecCCceeEEe-cCCeeEEecCccccCCCcceeecCCcEEEEeeCCEEeecc
Confidence 799999999999999999999999999999999765443 222111 11122222
Q ss_pred -----------------cC----CeeEEEEEEeeecCeEEEEec---CCCC---------CC--CCCCCCCCCCCCCchH
Q 008154 134 -----------------FG----GEQEIAFFHEYREGVDWVFVD---HPSY---------HR--PGNPYGDINGAFGDNQ 178 (576)
Q Consensus 134 -----------------~~----~~~~~~~~~~~~~gv~v~~l~---~~~~---------~~--~~~~y~~~~~~~~~~~ 178 (576)
+| ....+|+|...++. .+.++ ...+ .+ +..+|++-. .+..++
T Consensus 190 ~w~~~~~v~av~yd~pi~Gy~~~~~n~lrlW~a~~~~--~f~l~~fn~gdy~~a~~~~~~~~~It~~LYp~D~-~~~Gk~ 266 (796)
T 1l5w_A 190 RWEPEFTITGQAWDLPVVGYRNGVAQPLRLWQATHAH--PFDLTKFNDGDFLRAEQQGINAEKLTKVLYPNDN-AFEGKK 266 (796)
T ss_dssp CEECSEEEEEEEEEEEEECSSSCCEEEEEEEEEECSS--CCCHHHHHTTCTTGGGHHHHHHHGGGTCSSCCCS-SHHHHH
T ss_pred eecCCceEEEEEecccccCCCCCceEEEEEEEeccCc--ccChhhcCCccHhhhhhchHhHhhhhhcCcCCCC-ccchHH
Confidence 23 33445555555544 12222 1111 11 456888610 011156
Q ss_pred HHH---HHHHHHHHhh-cccCC-----CCCCCCCCccEEEeCCCccchHHH-HHHhhc----cCCCCC---CCCcEEEEe
Q 008154 179 FRY---TLLCYAACEA-PLVLP-----LGGFTYGEKCIFLVNDWHAGLVPV-LLASKY----RPHGVY---KDARSILVI 241 (576)
Q Consensus 179 ~r~---~~~~~~~~~~-~~~~~-----~~~~~~~~pDVvH~~~~~~~~~~~-~l~~~~----~~~~~~---~~~~~v~t~ 241 (576)
.|+ .+|+.++++. +++++ +..+. +|||||+||||+++++. +++... .....+ .+..++||+
T Consensus 267 lRL~Qe~ff~~a~lq~ilr~~~~~~~~~~~l~--~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~ 344 (796)
T 1l5w_A 267 LRLMQQYFQCACSVADILRRHHLAGRKLHELA--DYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTN 344 (796)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCGGGHH--HHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCChhhcC--CccEEEecCCccHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEe
Confidence 777 6777777775 43221 11111 69999999999999877 554321 011011 257899999
Q ss_pred ecCCCCCC--CChhhhhhcCCChhhhc-----------cccccc----ccccccccCCcCccchhHHHHHHhccceeccC
Q 008154 242 HNLSHQGV--EPAATYKNLGLPSEWYG-----------ALEWVF----PTWARTHALDTGEAVNVLKGAIVTADRLLTVS 304 (576)
Q Consensus 242 H~~~~~~~--~~~~~~~~~~~~~~~~~-----------~~~~~~----~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS 304 (576)
||+.+++. ||.++++.+- + +++. .....+ ..+.+. .....+.++|.+.|+..|+.|++||
T Consensus 345 HTl~~egle~wp~~l~~~~l-p-r~~~ii~~I~~~f~~~~~~~~~~~~~~~~~~-~i~~~~~vnMa~lai~~S~~VNgVS 421 (796)
T 1l5w_A 345 HTLMPEALERWDVKLVKGLL-P-RHMQIINEINTRFKTLVEKTWPGDEKVWAKL-AVVHDKQVHMANLCVVGGFAVNGVA 421 (796)
T ss_dssp CCCSGGGSCEEEHHHHHHHC-H-HHHHHHHHHHHHHHHHHHHHSTTCHHHHHHH-CSEETTEEEHHHHHHHHSSEEEESS
T ss_pred cCCcHhhhhcCCHHHHHHHh-H-HHHHHHhccCHHHHHHHHHhcCCcHHHHhhh-hcccCCcccHHHHHHHhcCcccccc
Confidence 99999885 7777774321 1 1111 000000 001111 1112447999999999999999999
Q ss_pred ccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCC---CCccccccCCc-----------------CC-----
Q 008154 305 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPS---SDEHIASHYSI-----------------DD----- 359 (576)
Q Consensus 305 ~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~---~~~~l~~~~~~-----------------~~----- 359 (576)
+.+.+.++++.++ +.+...+.++..|+||||...|... ..+.+.+...+ ++
T Consensus 422 ~lH~e~ik~~~f~----~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~~~~~d~~~~~ 497 (796)
T 1l5w_A 422 ALHSDLVVKDLFP----EYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQ 497 (796)
T ss_dssp HHHHHHHHHTTSH----HHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHHHHH
T ss_pred HHHHHHHHhHHhh----HHHHhCccccCCCcCCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHHHHhcCCCHHHHH
Confidence 9999999876653 3445566789999999999888421 21222222222 22
Q ss_pred --cccchHhHHH----HHHHcCCCCCCCCCEEEEecccccccCHHH-HHHHHHhhhc---------CCcEEEEEeCCChh
Q 008154 360 --LSGKVQCKIA----LQKELGLPIRPDCPLIGFIGRLDYQKGIDL-IRLAAPEILA---------DDIQFVMLGSGDPQ 423 (576)
Q Consensus 360 --~~~~~~~~~~----~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~-ll~a~~~L~~---------~~~~lii~G~g~~~ 423 (576)
|..+..++.. +++..|++.+++.+++++++|+..+||+++ ++.++.++.+ .|+++||+|+++|.
T Consensus 498 ~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~ 577 (796)
T 1l5w_A 498 QYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPG 577 (796)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChh
Confidence 3556666666 588899998899999999999999999999 8999888765 58999999999988
Q ss_pred hHHHHH------HHHH------HhcC--ceEEEccCChhHHHHHHhcCCEEEeCCC--CCCCcHHHHHHHHcCCceEEeC
Q 008154 424 FESWMR------DTEA------TYKD--KYRGWVGFNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYGTIPVVHA 487 (576)
Q Consensus 424 ~~~~~~------~~~~------~~~~--~~~~~~~~~~~~~~~ll~~~Dv~v~ps~--~E~~g~s~lEAma~G~pvIat~ 487 (576)
++..++ .+++ ..++ +++++++|+..+++.++++||++++||+ +|+||++.|.||.+|.++|++.
T Consensus 578 y~~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtL 657 (796)
T 1l5w_A 578 YYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTL 657 (796)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECS
T ss_pred HHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCc
Confidence 877733 3443 3455 8999999999999999999999999999 9999999999999999999999
Q ss_pred ccccccccccccccccCCCCCcceeEeCCCCHHHHHHH---HHHHHHHhhhCHHHHHHHHHHHHhhhCCHHHHHHHHHHH
Q 008154 488 TGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTA---LRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQV 564 (576)
Q Consensus 488 ~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~---i~~~l~~~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~ 564 (576)
+|++.|+.... +.+|||+|.. +++++.+. ..+....+..++ .++++..+.+...|||+.- .+|.++
T Consensus 658 DGanvEi~e~v--------G~~NgF~FG~-~~~ev~~l~~~~y~a~~~y~~~~-~~~~vvd~~~~g~fs~~~~-~~y~~L 726 (796)
T 1l5w_A 658 DGANVEIAEKV--------GEENIFIFGH-TVEQVKAILAKGYDPVKWRKKDK-VLDAVLKELESGKYSDGDK-HAFDQM 726 (796)
T ss_dssp CTTHHHHHHHH--------CGGGSEECSC-CHHHHHHHHHHCCCHHHHHHHCH-HHHHHHHHHHHTTTTTTCT-TTTHHH
T ss_pred CCeeeehhhcc--------CCCcEEEecC-CHHHHHHHHHcccCHHHHhhcCH-HHHHHHHHHHcCCCCCCcH-HHHHHH
Confidence 99999986441 1479999987 77766532 222333333466 6888888888899999885 889999
Q ss_pred HHHhhh
Q 008154 565 FEWASI 570 (576)
Q Consensus 565 y~~~~~ 570 (576)
|+.++.
T Consensus 727 y~~L~~ 732 (796)
T 1l5w_A 727 LHSIGK 732 (796)
T ss_dssp HHHTST
T ss_pred HHHHhc
Confidence 998875
No 8
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=100.00 E-value=1e-40 Score=360.83 Aligned_cols=470 Identities=15% Similarity=0.150 Sum_probs=307.7
Q ss_pred cccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccC------------------ceeEEEeecC-----
Q 008154 79 SKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDL------------------GCCMKICCFG----- 135 (576)
Q Consensus 79 ~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~----- 135 (576)
.++||+|+++.++.++++++|.+.+.+|..|..|.+.+..- +.++. ...+.|.+.|
T Consensus 120 LgnGGLGrLAacfldS~AtL~~P~~G~Gi~Y~~G~F~Q~i~-dG~Q~E~~d~Wl~~~~pwe~~r~~~~~~V~f~g~v~~~ 198 (824)
T 2gj4_A 120 LGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKIC-GGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHT 198 (824)
T ss_dssp ECCSHHHHHHHHHHHHHHHTTCCEEEEEECCSBCSCEEEEE-TTEEEEECCCTTTTCCTTCEECGGGCEEEEESCEEEEC
T ss_pred cCCCcHHHHHHHHHHHHHhCCCCeEEEeecccCCCeeEEee-CCEEEEcCccccccCCcccccCCCceEEEEeCCEEEec
Confidence 57999999999999999999999999999999996554332 11111 1122332221
Q ss_pred -----------------------Ce----eEEEEEEeee-----------cCeEEEEecCC-CCCCCCCCCCCCCCCCCc
Q 008154 136 -----------------------GE----QEIAFFHEYR-----------EGVDWVFVDHP-SYHRPGNPYGDINGAFGD 176 (576)
Q Consensus 136 -----------------------~~----~~~~~~~~~~-----------~gv~v~~l~~~-~~~~~~~~y~~~~~~~~~ 176 (576)
.. ..+|+|.... ++...++.+.. ...=+..+|++- ..+..
T Consensus 199 ~~g~~w~~~~~v~av~yD~pi~Gy~~~~vn~lRlW~a~~~~~f~~~~fn~G~~~~a~~d~~~~enIt~~LYp~D-~~~~G 277 (824)
T 2gj4_A 199 SQGAKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAPNDFNLKDFNVGGYIQAVLDRNLAENISRVLYPND-NFFEG 277 (824)
T ss_dssp SSSEEEESCEEEEEEEEEEEEECSSSSCEEEEEEEEEECCC----------CHHHHHHTHHHHHGGGSBCCCCS-SCCCC
T ss_pred CCCceecccceEEEeeccCCcCCCCCCceEEEEEEEeecCcccchhhccCccHHHHHhcccchhhcCcCCCCCC-Cccch
Confidence 11 2445554431 11111111100 000134578761 11223
Q ss_pred hHHHH---HHHHHHHHhh-ccc-----CCCC-----CCCC-CCccEEEeCCCccchHHH-HHHhhccCCC----CC---C
Q 008154 177 NQFRY---TLLCYAACEA-PLV-----LPLG-----GFTY-GEKCIFLVNDWHAGLVPV-LLASKYRPHG----VY---K 233 (576)
Q Consensus 177 ~~~r~---~~~~~~~~~~-~~~-----~~~~-----~~~~-~~pDVvH~~~~~~~~~~~-~l~~~~~~~~----~~---~ 233 (576)
++.|+ .+++.+.++. +++ +++. .+.. .+|||||+||||+++++. +++...-..+ .+ .
T Consensus 278 k~lRL~Qeyf~~sa~lqdilr~~~~~~~g~~~~~~~~~~~~~~p~viHlNDtHpal~i~ElmR~l~d~~~l~~d~A~~i~ 357 (824)
T 2gj4_A 278 KELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTNFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVT 357 (824)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHC-----------CGGGHHHHEEEEEESSTTTTHHHHHHHHHHHTSCCCHHHHHHHH
T ss_pred HhHhhhhhhhhhhhHHHHHHHHHHHhccccccccccchhhcCCCcEEEccCCchHhHHHHHHHHHHHhcCCCHHHHHHHh
Confidence 57887 4555554442 222 2210 1110 158899999999999887 5543210000 00 1
Q ss_pred CCcEEEEeecCCCCCC--CChhhhhh-cC--------CChhhhcccccccc----ccccccc--CCcCccchhHHHHHHh
Q 008154 234 DARSILVIHNLSHQGV--EPAATYKN-LG--------LPSEWYGALEWVFP----TWARTHA--LDTGEAVNVLKGAIVT 296 (576)
Q Consensus 234 ~~~~v~t~H~~~~~~~--~~~~~~~~-~~--------~~~~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~~~a~~~ 296 (576)
+..++||+||+.+++. ||..++.. ++ +...++......++ .+.+... .++.+.++|.+.|+..
T Consensus 358 ~~~~vfT~HTl~~eglE~wp~~l~~~lLPr~~~ii~~in~~f~~~~~~~~~~~~~~~~~~~~i~~~~~~~vnMa~lai~~ 437 (824)
T 2gj4_A 358 VKTCAYTNHTVLPEALERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAG 437 (824)
T ss_dssp HHHEEEECCCCCGGGSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHCSEECSSSCEEEHHHHHHHT
T ss_pred cCcEEEEeCCChHHHhhhchHHHHHHhCchHHHHHHHHHHHHHHHHHHHcCCcHHHHHhhhhhhhcCCCcccHHHHHHHh
Confidence 2358999999999997 88887744 31 01111110000000 0100000 1134679999999999
Q ss_pred ccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCC---CCcccccc------------------C
Q 008154 297 ADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPS---SDEHIASH------------------Y 355 (576)
Q Consensus 297 ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~---~~~~l~~~------------------~ 355 (576)
|+.|++||+.+.+.++++.++. .+...+.++..|+||||...|... ..+.+.+. |
T Consensus 438 S~~VNgVS~lH~e~ik~~~f~~----~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~lI~~~ig~~W~~~~~~l~~L~~y 513 (824)
T 2gj4_A 438 SHAVNGVARIHSEILKKTIFKD----FYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSY 513 (824)
T ss_dssp CSCEEESSHHHHHHHHHTTTHH----HHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGG
T ss_pred cCceeeEcHHHHHHHhhHHhHH----HHHcChhhcccccCCcChhhhcccCCHhHHHHHHHhcCchhhhCHHHHHHHHhc
Confidence 9999999999999997766543 444557789999999999999421 12222221 2
Q ss_pred Cc-CC----c-ccchHhHHH----HHHHcCCCCCCCCCEEEEecccccccCHHHH-HHHHHhhh---c-C-----CcEEE
Q 008154 356 SI-DD----L-SGKVQCKIA----LQKELGLPIRPDCPLIGFIGRLDYQKGIDLI-RLAAPEIL---A-D-----DIQFV 415 (576)
Q Consensus 356 ~~-~~----~-~~~~~~~~~----~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~l-l~a~~~L~---~-~-----~~~li 415 (576)
.. ++ | ..+..++.. +++..|++.+++.++++++.||..+||++++ +.++.++. + + ++++|
T Consensus 514 ~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~I 593 (824)
T 2gj4_A 514 VDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVM 593 (824)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEE
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEE
Confidence 22 11 1 233444454 7788999988999999999999999999998 88888874 2 2 67999
Q ss_pred EEeCCChhhHHHHHH------HHHHh------cC--ceEEEccCChhHHHHHHhcCCEEEeCCC--CCCCcHHHHHHHHc
Q 008154 416 MLGSGDPQFESWMRD------TEATY------KD--KYRGWVGFNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRY 479 (576)
Q Consensus 416 i~G~g~~~~~~~~~~------~~~~~------~~--~~~~~~~~~~~~~~~ll~~~Dv~v~ps~--~E~~g~s~lEAma~ 479 (576)
|+|+++|.++..++. +++.. ++ +++++++|+..+++.++++||++++||+ +|+||++.|.||.+
T Consensus 594 f~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlN 673 (824)
T 2gj4_A 594 IGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLN 673 (824)
T ss_dssp EECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHT
T ss_pred EEEeCCHhHHHHHHHHHHHHHHHHHhccCcccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc
Confidence 999999888877443 33333 44 8999999999999999999999999999 99999999999999
Q ss_pred CCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHH--------------------------------
Q 008154 480 GTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALR-------------------------------- 527 (576)
Q Consensus 480 G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~-------------------------------- 527 (576)
|.++|+|.+|++.|+..+. +.+|||+|... ++++ ..+.
T Consensus 674 GaLtigtlDGanvEi~e~v--------G~~Ngf~FG~~-~~ev-~~l~~~~~~a~~~Y~~~~~l~~v~d~i~~g~fs~~~ 743 (824)
T 2gj4_A 674 GALTIGTMDGANVEMAEEA--------GEENFFIFGMR-VEDV-DRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQ 743 (824)
T ss_dssp TCEEEECSCTTHHHHHHHH--------CGGGSEECSCC-HHHH-HHHHHHCCCHHHHHHHCHHHHHHHHHHHHTTTCTTS
T ss_pred CceEEEEecCccchhhhcc--------CCCCEEEeCCc-HHHH-HHHHHcCCCHHHHhcCCHHHHHHHHHHHhCCCCCCC
Confidence 9999999999998876421 15799999764 4444 2221
Q ss_pred ------------------------------HHHHHhhhCHHHHHHHHHHHHhh--hCCHHHHHHHHHHH
Q 008154 528 ------------------------------FAIRTYREHKSSWEGLMRRGMEK--DYTWENAAIQYEQV 564 (576)
Q Consensus 528 ------------------------------~~l~~~~~~~~~~~~~~~~a~~~--~fs~~~~~~~y~~~ 564 (576)
+.+...+.|++.|.+|+..+++. .||.++++++|.+-
T Consensus 744 ~~~y~~ly~~l~~~D~~~~~~Df~~y~~~q~~v~~~y~d~~~W~~~~~~nia~~g~FssdRtI~eY~~~ 812 (824)
T 2gj4_A 744 PDLFKDIVNMLMHHDRFKVFADYEEYVKCQERVSALYKNPREWTRMVIRNIATSGKFSSDRTIAQYARE 812 (824)
T ss_dssp TTTTHHHHHHHHHCCTTCTGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCGGGBHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCChhhhhhhHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhCCcCcHHHHHHHHHH
Confidence 01222346899999999998643 79999999999864
No 9
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=100.00 E-value=4.4e-39 Score=357.91 Aligned_cols=423 Identities=17% Similarity=0.182 Sum_probs=277.5
Q ss_pred CceEEEEeeccC---------CccccCcHHHHHhh--------HHHHHHhCCCcEE----EEEecCCCCCCcccchhccc
Q 008154 65 SYNIVFVTAEAA---------PYSKTGGLGDVCGS--------LPVALAARGHRVM----VVSPRYFNGTAADENFTLAK 123 (576)
Q Consensus 65 ~mkI~~~s~e~~---------P~~~~GG~~~~~~~--------la~~l~~~G~~V~----vi~~~~~~~~~~~~~~~~~~ 123 (576)
.|+|+++|...+ |. .||..+|+.+ ++++|+++||+|+ ++|...+.... . .+.+..
T Consensus 278 ~~~i~~is~hg~~~~~~~lG~~d--tGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~g-~-~y~~~~ 353 (816)
T 3s28_A 278 VFNVVILSPHGYFAQDNVLGYPD--TGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVG-T-TCGERL 353 (816)
T ss_dssp CCEEEEECCSSCCCSSSCTTSTT--CSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCTT-S-STTSSE
T ss_pred eeEEEEEcCCcccCccccCCCCC--CCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCCCC-C-ccCCcc
Confidence 579999999876 74 8999999995 6666677999887 88876543211 1 111110
Q ss_pred cCceeEEEeecCCeeEEEEEEeeecCeEEEEecCCC-------CCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCC
Q 008154 124 DLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPS-------YHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLP 196 (576)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~~~-------~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~ 196 (576)
+. ....+|+++++++..+ |..+..+++. ...|. .......+...+
T Consensus 354 ------e~------------i~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~--------L~~F~--~~~l~~il~~~~ 405 (816)
T 3s28_A 354 ------ER------------VYDSEYCDILRVPFRTEKGIVRKWISRFEVWPY--------LETYT--EDAAVELSKELN 405 (816)
T ss_dssp ------EE------------CTTCSSEEEEEECEEETTEEECSCCCTTTCGGG--------HHHHH--HHHHHHHHHHCS
T ss_pred ------ee------------ecCcCCeEEEEecCCCccccccccccHHHHHHH--------HHHHH--HHHHHHHHHhcC
Confidence 00 0012488899887322 2333334431 22221 122222222222
Q ss_pred CCCCCCCCccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhccccccccccc
Q 008154 197 LGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWA 276 (576)
Q Consensus 197 ~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (576)
.+|||||+|.|.+++++.++++. .++|+|+|.|+...... ...+.....+.. .+
T Consensus 406 ------~~PDVIHsH~~~sglva~llar~-------~gvP~V~T~Hsl~~~k~------~~~~~~~~~~~~---~y---- 459 (816)
T 3s28_A 406 ------GKPDLIIGNYSDGNLVASLLAHK-------LGVTQCTIAHALEKTKY------PDSDIYWKKLDD---KY---- 459 (816)
T ss_dssp ------SCCSEEEEEHHHHHHHHHHHHHH-------HTCCEEEECSCCHHHHS------TTTTTTHHHHHH---HH----
T ss_pred ------CCCeEEEeCCchHHHHHHHHHHH-------cCCCEEEEEeccccccc------ccccchhhhHHH---HH----
Confidence 17999999998888877777665 47999999998621100 000111111000 00
Q ss_pred ccccCCcCccchhHHHHHHhccceeccCccchhhhccccCCcchh------h------hhhccCCceeEecCCCCCCCCC
Q 008154 277 RTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLH------E------ILSSRKSVLNGITNGIDITEWN 344 (576)
Q Consensus 277 ~~~~~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~------~------~~~~~~~~i~vi~nGvd~~~~~ 344 (576)
.....+..++.+++.||.|+++|+...+.+......+..+ + .+.....++.+||||||.+.|.
T Consensus 460 -----~~~~r~~aE~~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~ 534 (816)
T 3s28_A 460 -----HFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYF 534 (816)
T ss_dssp -----CHHHHHHHHHHHHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSC
T ss_pred -----HHHHHHHHHHHHHHhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcC
Confidence 0011223466789999999999998877542210000000 0 0011223899999999999998
Q ss_pred CCCCccccccCCcCCcccchH-------hHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEE
Q 008154 345 PSSDEHIASHYSIDDLSGKVQ-------CKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFV 415 (576)
Q Consensus 345 ~~~~~~l~~~~~~~~~~~~~~-------~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~li 415 (576)
|...... +...... +...+++.+|+...++.++|+|+||+.+.||++.+++|+.++.+ ++++|+
T Consensus 535 P~~~~~~-------Rl~~~~~~i~~~l~~p~~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~Lv 607 (816)
T 3s28_A 535 PYTEEKR-------RLTKFHSEIEELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLV 607 (816)
T ss_dssp CTTCTTT-------CCGGGHHHHHHHHHCSCCBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCEEE
T ss_pred ccchhhh-------hhhhccccccccccchhhHHHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeEEE
Confidence 7653210 0000000 00112244555334678999999999999999999999999876 579999
Q ss_pred EEeCCCh----------hhHHHHHHHHHH-hcCceEEEccCC-----hhHHHHHHh-cCCEEEeCCCCCCCcHHHHHHHH
Q 008154 416 MLGSGDP----------QFESWMRDTEAT-YKDKYRGWVGFN-----VPISHRITA-GCDILLMPSRFEPCGLNQLYAMR 478 (576)
Q Consensus 416 i~G~g~~----------~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~ll~-~~Dv~v~ps~~E~~g~s~lEAma 478 (576)
|+|+|++ ..+...+.+.+. +..++. +.|+. .+.+..+++ ++|++|+||.+|+||++++||||
T Consensus 608 IvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~-flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA 686 (816)
T 3s28_A 608 VVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFR-WISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMT 686 (816)
T ss_dssp EECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEE-EECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHH
T ss_pred EEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEE-EccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHH
Confidence 9999962 223333333332 223444 44431 244456666 78999999999999999999999
Q ss_pred cCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHH---hhhCCHH
Q 008154 479 YGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGM---EKDYTWE 555 (576)
Q Consensus 479 ~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a~---~~~fs~~ 555 (576)
||+|||+|+.||..|++.+ +.+|++++++|+++++++|.+++..+..|++.+.++++++. .++|||+
T Consensus 687 ~G~PVIasd~GG~~EiV~d----------g~~Gllv~p~D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe 756 (816)
T 3s28_A 687 CGLPTFATCKGGPAEIIVH----------GKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQ 756 (816)
T ss_dssp TTCCEEEESSBTHHHHCCB----------TTTBEEECTTSHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHSCCHH
T ss_pred cCCCEEEeCCCChHHHHcc----------CCcEEEeCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCHH
Confidence 9999999999999999988 89999999999999999999988666679999999999883 4789999
Q ss_pred HHHHHHHHHHHHh
Q 008154 556 NAAIQYEQVFEWA 568 (576)
Q Consensus 556 ~~~~~y~~~y~~~ 568 (576)
.++++|.++|+..
T Consensus 757 ~~a~~ll~lY~~~ 769 (816)
T 3s28_A 757 IYSQRLLTLTGVY 769 (816)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999864
No 10
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=100.00 E-value=5.3e-39 Score=346.20 Aligned_cols=404 Identities=16% Similarity=0.132 Sum_probs=277.0
Q ss_pred CceEEEEeeccCCcc---------ccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecC
Q 008154 65 SYNIVFVTAEAAPYS---------KTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFG 135 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~---------~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (576)
+|||++++..++|.. ..||.++++.+++++|+++||+|+++++....... ..+....
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~--~~~~~~~------------ 72 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENW--PEFSGEI------------ 72 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTB--GGGCCSE------------
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccc--cchhhhH------------
Confidence 599999999887731 36999999999999999999999999976432110 0111000
Q ss_pred CeeEEEEEEee--ecCeEEEEecCCCCC--CCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeC
Q 008154 136 GEQEIAFFHEY--REGVDWVFVDHPSYH--RPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVN 211 (576)
Q Consensus 136 ~~~~~~~~~~~--~~gv~v~~l~~~~~~--~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~ 211 (576)
... .+|++++.++..... ....++ ..+..+...+.+.++... .+|||||+|
T Consensus 73 --------~~~~~~~gv~v~~~~~~~~~~~~~~~~~-----------~~~~~~~~~l~~~l~~~~------~~~Divh~~ 127 (499)
T 2r60_A 73 --------DYYQETNKVRIVRIPFGGDKFLPKEELW-----------PYLHEYVNKIINFYREEG------KFPQVVTTH 127 (499)
T ss_dssp --------EECTTCSSEEEEEECCSCSSCCCGGGCG-----------GGHHHHHHHHHHHHHHHT------CCCSEEEEE
T ss_pred --------HhccCCCCeEEEEecCCCcCCcCHHHHH-----------HHHHHHHHHHHHHHHhcC------CCCCEEEEc
Confidence 001 257888888633211 000011 011111222333332210 169999999
Q ss_pred CCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcC---CChhhhcccccccccccccccCCcCccch
Q 008154 212 DWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLG---LPSEWYGALEWVFPTWARTHALDTGEAVN 288 (576)
Q Consensus 212 ~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (576)
.+..++.+.++++. .++|+|+|.|+... ....... .....+... .. ......
T Consensus 128 ~~~~~~~~~~~~~~-------~~~p~v~~~H~~~~------~~~~~~~~~~~~~~~~~~~-~~-----------~~~~~~ 182 (499)
T 2r60_A 128 YGDGGLAGVLLKNI-------KGLPFTFTGHSLGA------QKMEKLNVNTSNFKEMDER-FK-----------FHRRII 182 (499)
T ss_dssp HHHHHHHHHHHHHH-------HCCCEEEECSSCHH------HHHHTTCCCSTTSHHHHHH-HC-----------HHHHHH
T ss_pred CCcchHHHHHHHHh-------cCCcEEEEccCccc------ccchhhccCCCCcchhhhh-HH-----------HHHHHH
Confidence 87666555555443 46899999998521 0001000 000000000 00 001123
Q ss_pred hHHHHHHhccceeccCccchhhhccccCCcchhhh--hh-c----cCCceeEecCCCCCCCCCCCCCccccccCCcCCcc
Q 008154 289 VLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEI--LS-S----RKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLS 361 (576)
Q Consensus 289 ~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~--~~-~----~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~ 361 (576)
+++.+++.||.++++|+..++.+.. . ++ . ...++.+||||+|.+.|.+....
T Consensus 183 ~~~~~~~~ad~vi~~S~~~~~~~~~---------~~~~g~~~~~~~~~ki~vi~ngvd~~~~~~~~~~------------ 241 (499)
T 2r60_A 183 AERLTMSYADKIIVSTSQERFGQYS---------HDLYRGAVNVEDDDKFSVIPPGVNTRVFDGEYGD------------ 241 (499)
T ss_dssp HHHHHHHHCSEEEESSHHHHHHTTT---------SGGGTTTCCTTCGGGEEECCCCBCTTTSSSCCCH------------
T ss_pred HHHHHHhcCCEEEECCHHHHHHHHh---------hhcccccccccCCCCeEEECCCcChhhcCccchh------------
Confidence 5677889999999999998876532 2 23 2 45689999999998888765421
Q ss_pred cchHhHHHHHHHcC-----CCCCCCCCEEEEecccccccCHHHHHHHHHhhhcC---CcEEEEEeCCChh----------
Q 008154 362 GKVQCKIALQKELG-----LPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILAD---DIQFVMLGSGDPQ---------- 423 (576)
Q Consensus 362 ~~~~~~~~~~~~~~-----i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~---~~~lii~G~g~~~---------- 423 (576)
..+..+++.+| ++ ++.++|+|+||+.+.||++.+++|++.+.+. .++++|+|+.+..
T Consensus 242 ---~~~~~~r~~~~~~~~~~~--~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~ 316 (499)
T 2r60_A 242 ---KIKAKITKYLERDLGSER--MELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQE 316 (499)
T ss_dssp ---HHHHHHHHHHHHHSCGGG--TTSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHH
T ss_pred ---hhHHHHHHHhcccccccC--CCCcEEEEeecCccccCHHHHHHHHHHHHHhCCCceEEEEECCCCCccccccccccc
Confidence 11356677777 65 4678999999999999999999999998652 4689999983211
Q ss_pred ----hHHHHHHHHHH-hcCceEEEccCChhHHHHHHhcC----CEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccc
Q 008154 424 ----FESWMRDTEAT-YKDKYRGWVGFNVPISHRITAGC----DILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDT 494 (576)
Q Consensus 424 ----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~----Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~ 494 (576)
.++..+.+.+. +..++.+....+.+.+..+|+.| |++|+||.+|+||++++|||+||+|||+|+.||..|+
T Consensus 317 ~~~y~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~g~~e~ 396 (499)
T 2r60_A 317 EKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEI 396 (499)
T ss_dssp HHHHHHHHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSBHHHHH
T ss_pred chHHHHHHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecCCCHHHH
Confidence 23333333332 23455544333556677899999 9999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH---HhhhCCHHHHHHHHHHHHHHhhhC
Q 008154 495 VENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFEWASID 571 (576)
Q Consensus 495 i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a---~~~~fs~~~~~~~y~~~y~~~~~~ 571 (576)
+.+ +.+|++++++|+++++++|.+++. |++.+.++++++ +.++|||++++++|.++|+++++.
T Consensus 397 v~~----------~~~g~l~~~~d~~~la~~i~~ll~----~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~ 462 (499)
T 2r60_A 397 LDG----------GKYGVLVDPEDPEDIARGLLKAFE----SEETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADR 462 (499)
T ss_dssp TGG----------GTSSEEECTTCHHHHHHHHHHHHS----CHHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC
T ss_pred hcC----------CceEEEeCCCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 998 789999999999999999999875 888888888877 345699999999999999999865
Q ss_pred C
Q 008154 572 P 572 (576)
Q Consensus 572 ~ 572 (576)
.
T Consensus 463 ~ 463 (499)
T 2r60_A 463 K 463 (499)
T ss_dssp -
T ss_pred h
Confidence 4
No 11
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=100.00 E-value=1.8e-38 Score=336.15 Aligned_cols=398 Identities=16% Similarity=0.182 Sum_probs=274.4
Q ss_pred ccCCCceEEEEeeccCCcc-----ccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecC
Q 008154 61 QTRVSYNIVFVTAEAAPYS-----KTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFG 135 (576)
Q Consensus 61 ~~~~~mkI~~~s~e~~P~~-----~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (576)
...++|||++++..++|.. ..||.++++.+++++|+++||+|+++++....... .
T Consensus 16 ~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~--~------------------ 75 (438)
T 3c48_A 16 PRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQG--E------------------ 75 (438)
T ss_dssp ---CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGC--S------------------
T ss_pred cCcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCc--c------------------
Confidence 3456799999999888731 36999999999999999999999999976422100 0
Q ss_pred CeeEEEEEEeeecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhh-cccCCCCCCCCCCccEEEeCCCc
Q 008154 136 GEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEA-PLVLPLGGFTYGEKCIFLVNDWH 214 (576)
Q Consensus 136 ~~~~~~~~~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~pDVvH~~~~~ 214 (576)
.....++++++.++...+.. ... . +....+..+.....+. ++... +|||||+|.+.
T Consensus 76 -------~~~~~~~v~v~~~~~~~~~~----~~~--~---~~~~~~~~~~~~~~~~~~~~~~-------~~Div~~~~~~ 132 (438)
T 3c48_A 76 -------IVRVAENLRVINIAAGPYEG----LSK--E---ELPTQLAAFTGGMLSFTRREKV-------TYDLIHSHYWL 132 (438)
T ss_dssp -------EEEEETTEEEEEECCSCSSS----CCG--G---GGGGGHHHHHHHHHHHHHHHTC-------CCSEEEEEHHH
T ss_pred -------cccccCCeEEEEecCCCccc----cch--h---HHHHHHHHHHHHHHHHHHhccC-------CCCEEEeCCcc
Confidence 01123678888886433211 000 0 0011111222222222 21111 48999999876
Q ss_pred cchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHH
Q 008154 215 AGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAI 294 (576)
Q Consensus 215 ~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 294 (576)
.++...++.+. .++|+|+|.|+..... ...+.... .... .....+++.++
T Consensus 133 ~~~~~~~~~~~-------~~~p~v~~~h~~~~~~------~~~~~~~~-~~~~----------------~~~~~~~~~~~ 182 (438)
T 3c48_A 133 SGQVGWLLRDL-------WRIPLIHTAHTLAAVK------NSYRDDSD-TPES----------------EARRICEQQLV 182 (438)
T ss_dssp HHHHHHHHHHH-------HTCCEEEECSSCHHHH------SCC----C-CHHH----------------HHHHHHHHHHH
T ss_pred HHHHHHHHHHH-------cCCCEEEEecCCcccc------cccccccC-Ccch----------------HHHHHHHHHHH
Confidence 66555554443 3689999999752100 00000000 0000 00113567788
Q ss_pred HhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHc
Q 008154 295 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKEL 374 (576)
Q Consensus 295 ~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 374 (576)
+.+|.++++|+..++.+. ..++.+..++.+||||+|.+.|.+.... ....+++.+
T Consensus 183 ~~~d~ii~~s~~~~~~~~---------~~~g~~~~k~~vi~ngvd~~~~~~~~~~----------------~~~~~r~~~ 237 (438)
T 3c48_A 183 DNADVLAVNTQEEMQDLM---------HHYDADPDRISVVSPGADVELYSPGNDR----------------ATERSRREL 237 (438)
T ss_dssp HHCSEEEESSHHHHHHHH---------HHHCCCGGGEEECCCCCCTTTSCCC--------------------CHHHHHHT
T ss_pred hcCCEEEEcCHHHHHHHH---------HHhCCChhheEEecCCccccccCCcccc----------------hhhhhHHhc
Confidence 999999999998887653 2345556789999999998888665321 023467888
Q ss_pred CCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--C--CcEEEEEeC----CChhhHHHHHHHHHH-hcCceEEEccC
Q 008154 375 GLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D--DIQFVMLGS----GDPQFESWMRDTEAT-YKDKYRGWVGF 445 (576)
Q Consensus 375 ~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~--~~~lii~G~----g~~~~~~~~~~~~~~-~~~~~~~~~~~ 445 (576)
+++ ++.++|+|+||+.+.||++.+++|+..+.+ + +++|+|+|+ |+ ..+...+.+.+. ...++.+....
T Consensus 238 ~~~--~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~g~-~~~~l~~~~~~~~l~~~v~~~g~~ 314 (438)
T 3c48_A 238 GIP--LHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNA-TPDTYRHMAEELGVEKRIRFLDPR 314 (438)
T ss_dssp TCC--SSSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC-------CHHHHHHHHTTCTTTEEEECCC
T ss_pred CCC--CCCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCCc-HHHHHHHHHHHcCCCCcEEEcCCC
Confidence 886 567899999999999999999999999975 2 799999998 53 223333333332 23455544333
Q ss_pred ChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHH
Q 008154 446 NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTA 525 (576)
Q Consensus 446 ~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~ 525 (576)
+.+.+..+|+.||++|+||.+|++|++++|||+||+|||+++.|+..|.+.+ +.+|++++++|+++++++
T Consensus 315 ~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~----------~~~g~~~~~~d~~~la~~ 384 (438)
T 3c48_A 315 PPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAE----------GETGLLVDGHSPHAWADA 384 (438)
T ss_dssp CHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESCTTHHHHSCB----------TTTEEEESSCCHHHHHHH
T ss_pred ChHHHHHHHHhCCEEEECccccCCchHHHHHHHcCCCEEecCCCChhHHhhC----------CCcEEECCCCCHHHHHHH
Confidence 5566778999999999999999999999999999999999999999999988 889999999999999999
Q ss_pred HHHHHHHhhhCHHHHHHHHHHHH--hhhCCHHHHHHHHHHHHHHhhhCCC
Q 008154 526 LRFAIRTYREHKSSWEGLMRRGM--EKDYTWENAAIQYEQVFEWASIDPP 573 (576)
Q Consensus 526 i~~~l~~~~~~~~~~~~~~~~a~--~~~fs~~~~~~~y~~~y~~~~~~~~ 573 (576)
|.+++. |++.+.++++++. .+.|+|++++++|.++|+++++++.
T Consensus 385 i~~l~~----~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 430 (438)
T 3c48_A 385 LATLLD----DDETRIRMGEDAVEHARTFSWAATAAQLSSLYNDAIANEN 430 (438)
T ss_dssp HHHHHH----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHc----CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhcc
Confidence 999986 8888888888772 3349999999999999999987653
No 12
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=100.00 E-value=4.6e-37 Score=320.79 Aligned_cols=371 Identities=18% Similarity=0.206 Sum_probs=256.3
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 145 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (576)
|+.-+.+..+ |. .||.++++.+++++|+++||+|+++++..+... ..
T Consensus 14 ~~~~~~~~~~-p~--~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~------------------------------~~ 60 (394)
T 2jjm_A 14 MKLKIGITCY-PS--VGGSGVVGTELGKQLAERGHEIHFITSGLPFRL------------------------------NK 60 (394)
T ss_dssp -CCEEEEECC-C----CHHHHHHHHHHHHHHHTTCEEEEECSSCC----------------------------------C
T ss_pred heeeeehhcC-CC--CCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcc------------------------------cc
Confidence 5555555554 52 699999999999999999999999986532110 00
Q ss_pred eecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhh
Q 008154 146 YREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASK 225 (576)
Q Consensus 146 ~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~ 225 (576)
..+++.+..++.+.+.. +.. ....+ .+...+.+.++.. +|||||+|.........++..+
T Consensus 61 ~~~~i~~~~~~~~~~~~----~~~-------~~~~~-~~~~~l~~~l~~~--------~~Dvv~~~~~~~~~~~~~~~~~ 120 (394)
T 2jjm_A 61 VYPNIYFHEVTVNQYSV----FQY-------PPYDL-ALASKMAEVAQRE--------NLDILHVHYAIPHAICAYLAKQ 120 (394)
T ss_dssp CCTTEEEECCCCC--------CCS-------CCHHH-HHHHHHHHHHHHH--------TCSEEEECSSTTHHHHHHHHHH
T ss_pred cCCceEEEecccccccc----ccc-------ccccH-HHHHHHHHHHHHc--------CCCEEEEcchhHHHHHHHHHHH
Confidence 11345444443222110 100 00111 1112223333222 7999999976544333333332
Q ss_pred ccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccCc
Q 008154 226 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 305 (576)
Q Consensus 226 ~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS~ 305 (576)
... .++|+|+|.|+... ...+.. .....+++.+++.||.++++|+
T Consensus 121 ~~~----~~~p~v~~~h~~~~---------~~~~~~----------------------~~~~~~~~~~~~~ad~ii~~s~ 165 (394)
T 2jjm_A 121 MIG----ERIKIVTTLHGTDI---------TVLGSD----------------------PSLNNLIRFGIEQSDVVTAVSH 165 (394)
T ss_dssp HTT----TCSEEEEECCHHHH---------HTTTTC----------------------TTTHHHHHHHHHHSSEEEESCH
T ss_pred hhc----CCCCEEEEEecCcc---------cccCCC----------------------HHHHHHHHHHHhhCCEEEECCH
Confidence 210 25899999997411 000000 0012356778899999999999
Q ss_pred cchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEE
Q 008154 306 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 385 (576)
Q Consensus 306 ~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i 385 (576)
...+.+. ..+.. ..++.+||||+|.+.|.+.. ...+++.++++ ++.++|
T Consensus 166 ~~~~~~~---------~~~~~-~~~~~vi~ngv~~~~~~~~~-------------------~~~~~~~~~~~--~~~~~i 214 (394)
T 2jjm_A 166 SLINETH---------ELVKP-NKDIQTVYNFIDERVYFKRD-------------------MTQLKKEYGIS--ESEKIL 214 (394)
T ss_dssp HHHHHHH---------HHTCC-SSCEEECCCCCCTTTCCCCC-------------------CHHHHHHTTCC-----CEE
T ss_pred HHHHHHH---------HhhCC-cccEEEecCCccHHhcCCcc-------------------hHHHHHHcCCC--CCCeEE
Confidence 9887753 22222 46899999999988887654 24567778886 467899
Q ss_pred EEecccccccCHHHHHHHHHhhhc-CCcEEEEEeCCChhhHHHHHHHHHH-hcCceEEEccCChhHHHHHHhcCCEEEeC
Q 008154 386 GFIGRLDYQKGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEAT-YKDKYRGWVGFNVPISHRITAGCDILLMP 463 (576)
Q Consensus 386 ~~~Gr~~~~Kg~~~ll~a~~~L~~-~~~~lii~G~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~Dv~v~p 463 (576)
+|+||+.+.||++.+++|++.+.+ .+++|+|+|+|+ ..++..+.+.+. ...++. +.++..+ +..+|+.||++|+|
T Consensus 215 ~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~-~~~~l~~~~~~~~l~~~v~-~~g~~~~-~~~~~~~adv~v~p 291 (394)
T 2jjm_A 215 IHISNFRKVKRVQDVVQAFAKIVTEVDAKLLLVGDGP-EFCTILQLVKNLHIEDRVL-FLGKQDN-VAELLAMSDLMLLL 291 (394)
T ss_dssp EEECCCCGGGTHHHHHHHHHHHHHSSCCEEEEECCCT-THHHHHHHHHTTTCGGGBC-CCBSCSC-THHHHHTCSEEEEC
T ss_pred EEeeccccccCHHHHHHHHHHHHhhCCCEEEEECCch-HHHHHHHHHHHcCCCCeEE-EeCchhh-HHHHHHhCCEEEec
Confidence 999999999999999999999976 479999999985 334444444332 123443 4445443 45799999999999
Q ss_pred CCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHH
Q 008154 464 SRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGL 543 (576)
Q Consensus 464 s~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~ 543 (576)
|.+|++|++++|||+||+|||+++.|+..|++.+ +.+|++++++|+++++++|.+++. |++.+.++
T Consensus 292 s~~e~~~~~~~EAma~G~PvI~~~~~~~~e~v~~----------~~~g~~~~~~d~~~la~~i~~l~~----~~~~~~~~ 357 (394)
T 2jjm_A 292 SEKESFGLVLLEAMACGVPCIGTRVGGIPEVIQH----------GDTGYLCEVGDTTGVADQAIQLLK----DEELHRNM 357 (394)
T ss_dssp CSCCSCCHHHHHHHHTTCCEEEECCTTSTTTCCB----------TTTEEEECTTCHHHHHHHHHHHHH----CHHHHHHH
T ss_pred cccCCCchHHHHHHhcCCCEEEecCCChHHHhhc----------CCceEEeCCCCHHHHHHHHHHHHc----CHHHHHHH
Confidence 9999999999999999999999999999999988 889999999999999999999986 88888888
Q ss_pred HHHH---HhhhCCHHHHHHHHHHHHHHhhhCC
Q 008154 544 MRRG---MEKDYTWENAAIQYEQVFEWASIDP 572 (576)
Q Consensus 544 ~~~a---~~~~fs~~~~~~~y~~~y~~~~~~~ 572 (576)
++++ +.++|||++++++|.++|+++++..
T Consensus 358 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 389 (394)
T 2jjm_A 358 GERARESVYEQFRSEKIVSQYETIYYDVLRDD 389 (394)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhh
Confidence 8877 3478999999999999999988654
No 13
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=100.00 E-value=3.6e-37 Score=320.91 Aligned_cols=368 Identities=18% Similarity=0.194 Sum_probs=270.0
Q ss_pred CCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEE
Q 008154 64 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFF 143 (576)
Q Consensus 64 ~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (576)
++|||++++..++|. .||.++++..++++| .||+|+++++...... ...+.
T Consensus 3 ~~mkIl~v~~~~~p~--~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~--~~~~~----------------------- 53 (394)
T 3okp_A 3 ASRKTLVVTNDFPPR--IGGIQSYLRDFIATQ--DPESIVVFASTQNAEE--AHAYD----------------------- 53 (394)
T ss_dssp -CCCEEEEESCCTTS--CSHHHHHHHHHHTTS--CGGGEEEEEECSSHHH--HHHHH-----------------------
T ss_pred CCceEEEEeCccCCc--cchHHHHHHHHHHHh--cCCeEEEEECCCCccc--hhhhc-----------------------
Confidence 469999999988773 799999999999999 6999999998643210 00111
Q ss_pred EeeecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHH
Q 008154 144 HEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLA 223 (576)
Q Consensus 144 ~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~ 223 (576)
...+++++.++...... .. .....+.+.++.. +|||||+|..........+.
T Consensus 54 --~~~~~~~~~~~~~~~~~--------------~~----~~~~~l~~~~~~~--------~~Dvv~~~~~~~~~~~~~~~ 105 (394)
T 3okp_A 54 --KTLDYEVIRWPRSVMLP--------------TP----TTAHAMAEIIRER--------EIDNVWFGAAAPLALMAGTA 105 (394)
T ss_dssp --TTCSSEEEEESSSSCCS--------------CH----HHHHHHHHHHHHT--------TCSEEEESSCTTGGGGHHHH
T ss_pred --cccceEEEEcccccccc--------------ch----hhHHHHHHHHHhc--------CCCEEEECCcchHHHHHHHH
Confidence 11357777775322111 01 1112223333323 79999999755443323223
Q ss_pred hhccCCCCCCCCc-EEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceec
Q 008154 224 SKYRPHGVYKDAR-SILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLT 302 (576)
Q Consensus 224 ~~~~~~~~~~~~~-~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~ 302 (576)
++ .++| +|++.|+... ... .. .....+++..++.+|.+++
T Consensus 106 ~~-------~~~~~~i~~~h~~~~---------~~~-~~----------------------~~~~~~~~~~~~~~d~ii~ 146 (394)
T 3okp_A 106 KQ-------AGASKVIASTHGHEV---------GWS-ML----------------------PGSRQSLRKIGTEVDVLTY 146 (394)
T ss_dssp HH-------TTCSEEEEECCSTHH---------HHT-TS----------------------HHHHHHHHHHHHHCSEEEE
T ss_pred Hh-------cCCCcEEEEeccchh---------hhh-hc----------------------chhhHHHHHHHHhCCEEEE
Confidence 22 3565 8899996411 000 00 0012356777899999999
Q ss_pred cCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCC
Q 008154 303 VSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDC 382 (576)
Q Consensus 303 vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 382 (576)
+|+...+.+. +.+. ...++.+||||+|.+.|.+.... .+..+++.++++ ++.
T Consensus 147 ~s~~~~~~~~---------~~~~-~~~~~~vi~ngv~~~~~~~~~~~----------------~~~~~~~~~~~~--~~~ 198 (394)
T 3okp_A 147 ISQYTLRRFK---------SAFG-SHPTFEHLPSGVDVKRFTPATPE----------------DKSATRKKLGFT--DTT 198 (394)
T ss_dssp SCHHHHHHHH---------HHHC-SSSEEEECCCCBCTTTSCCCCHH----------------HHHHHHHHTTCC--TTC
T ss_pred cCHHHHHHHH---------HhcC-CCCCeEEecCCcCHHHcCCCCch----------------hhHHHHHhcCCC--cCc
Confidence 9999887763 2222 35789999999999888764322 257788889987 567
Q ss_pred CEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEE
Q 008154 383 PLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDIL 460 (576)
Q Consensus 383 ~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~ 460 (576)
++|+|+||+.+.||++.+++|++.+.+ ++++|+|+|+|+ ..+..+.+......++.+....+.+.+..+++.||++
T Consensus 199 ~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~ 276 (394)
T 3okp_A 199 PVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGR--YESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIF 276 (394)
T ss_dssp CEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEECCCT--THHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSEE
T ss_pred eEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEcCch--HHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCEE
Confidence 999999999999999999999999876 589999999985 2333333334444566554444666777899999999
Q ss_pred EeCCCC-------CCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHh
Q 008154 461 LMPSRF-------EPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTY 533 (576)
Q Consensus 461 v~ps~~-------E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~ 533 (576)
|+||.+ |++|++++|||++|+|||+++.|+..|.+.+ + +|++++++|+++++++|.+++.
T Consensus 277 v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~----------~-~g~~~~~~d~~~l~~~i~~l~~-- 343 (394)
T 3okp_A 277 AMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTP----------A-TGLVVEGSDVDKLSELLIELLD-- 343 (394)
T ss_dssp EECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGGGCCT----------T-TEEECCTTCHHHHHHHHHHHHT--
T ss_pred EecCccccccccccccCcHHHHHHHcCCCEEEeCCCChHHHHhc----------C-CceEeCCCCHHHHHHHHHHHHh--
Confidence 999999 9999999999999999999999999999998 7 9999999999999999999875
Q ss_pred hhCHHHHHHHHHHH---HhhhCCHHHHHHHHHHHHHHhhhCC
Q 008154 534 REHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFEWASIDP 572 (576)
Q Consensus 534 ~~~~~~~~~~~~~a---~~~~fs~~~~~~~y~~~y~~~~~~~ 572 (576)
|++.+.++++++ +.++|||++++++|.++|+++.+..
T Consensus 344 --~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~r~~ 383 (394)
T 3okp_A 344 --DPIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEPRKL 383 (394)
T ss_dssp --CHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHSCCC--
T ss_pred --CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhccCc
Confidence 888888888877 3457999999999999999887543
No 14
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=100.00 E-value=5.5e-35 Score=307.29 Aligned_cols=362 Identities=15% Similarity=0.145 Sum_probs=246.6
Q ss_pred CCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEE
Q 008154 64 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFF 143 (576)
Q Consensus 64 ~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (576)
++|||++++.. + ..||.++++.+++++|++.||+|++++..... ..+..... +.
T Consensus 39 ~~mkIl~v~~~--~--~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~~-----~~~~~~~~----~~------------- 92 (416)
T 2x6q_A 39 KGRSFVHVNST--S--FGGGVAEILHSLVPLLRSIGIEARWFVIEGPT-----EFFNVTKT----FH------------- 92 (416)
T ss_dssp TTCEEEEEESC--S--SSSTHHHHHHHHHHHHHHTTCEEEEEECCCCH-----HHHHHHHH----HH-------------
T ss_pred hccEEEEEeCC--C--CCCCHHHHHHHHHHHHHhCCCeEEEEEccCCc-----chhhhhcc----cc-------------
Confidence 46999999975 2 36999999999999999999999999864221 01110000 00
Q ss_pred EeeecCeEEEEecCCCCCCCCCCCCCCCCCCCch-HHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHH
Q 008154 144 HEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDN-QFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLL 222 (576)
Q Consensus 144 ~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l 222 (576)
....+.+. +. +. .. ...+..+.....+.++. .+|||||+|.+.......++
T Consensus 93 -~~~~~~~~-------~~-----~~-------~~~~~~~~~~~~~~~~~l~~--------~~~Dvv~~~~~~~~~~~~~~ 144 (416)
T 2x6q_A 93 -NALQGNES-------LK-----LT-------EEMKELYLNVNRENSKFIDL--------SSFDYVLVHDPQPAALIEFY 144 (416)
T ss_dssp -HHHTTCCS-------CC-----CC-------HHHHHHHHHHHHHHHHSSCG--------GGSSEEEEESSTTGGGGGGS
T ss_pred -eeeccccc-------cc-----cc-------HHHHHHHHHHHHHHHHHHhh--------cCCCEEEEeccchhhHHHHH
Confidence 00001100 00 00 11 11111122223333222 27999999987654432221
Q ss_pred HhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhcccee-
Q 008154 223 ASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLL- 301 (576)
Q Consensus 223 ~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~- 301 (576)
. ..+|+|+|+|+..... .... ..+.+..+..+|.++
T Consensus 145 ~---------~~~p~v~~~h~~~~~~------------~~~~----------------------~~~~~~~~~~~~~~i~ 181 (416)
T 2x6q_A 145 E---------KKSPWLWRCHIDLSSP------------NREF----------------------WEFLRRFVEKYDRYIF 181 (416)
T ss_dssp C---------CCSCEEEECCSCCSSC------------CHHH----------------------HHHHHHHHTTSSEEEE
T ss_pred H---------hcCCEEEEEccccCCc------------cHHH----------------------HHHHHHHHHhCCEEEE
Confidence 1 2389999999753210 0000 112334456677665
Q ss_pred ccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCC
Q 008154 302 TVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPD 381 (576)
Q Consensus 302 ~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 381 (576)
++|+...+.+ ...++.+||||+|...+.+.... ......+++.++++ ++
T Consensus 182 ~~s~~~~~~~---------------~~~~~~vi~ngvd~~~~~~~~~~--------------~~~~~~~r~~~~~~--~~ 230 (416)
T 2x6q_A 182 HLPEYVQPEL---------------DRNKAVIMPPSIDPLSEKNVELK--------------QTEILRILERFDVD--PE 230 (416)
T ss_dssp SSGGGSCTTS---------------CTTTEEECCCCBCTTSTTTSCCC--------------HHHHHHHHHHTTCC--TT
T ss_pred echHHHHhhC---------------CccceEEeCCCCChhhhcccccC--------------hhhHHHHHHHhCCC--CC
Confidence 6666444221 23678999999998766543211 12246678888887 57
Q ss_pred CCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCCh---hhHHHHHHHHHHh--cCceEEEc---cCChhHHH
Q 008154 382 CPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDP---QFESWMRDTEATY--KDKYRGWV---GFNVPISH 451 (576)
Q Consensus 382 ~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~---~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~ 451 (576)
.++|+++||+.+.||++.+++|+..+.+ ++++|+|+|+|+. ...+..+.+.+.. ..++.+.. ..+.+.+.
T Consensus 231 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~ 310 (416)
T 2x6q_A 231 KPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVN 310 (416)
T ss_dssp SCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHH
T ss_pred CcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHH
Confidence 7899999999999999999999999976 5899999999953 2233333333332 23444332 22345677
Q ss_pred HHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHH
Q 008154 452 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 452 ~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
.+++.||++|+||.+|++|++++|||+||+|||+++.||..|.+.+ +.+|++++ |+++++++|.+++.
T Consensus 311 ~~~~~ad~~v~ps~~E~~~~~~lEAma~G~PvI~~~~~g~~e~i~~----------~~~g~l~~--d~~~la~~i~~ll~ 378 (416)
T 2x6q_A 311 AFQRASDVILQMSIREGFGLTVTEAMWKGKPVIGRAVGGIKFQIVD----------GETGFLVR--DANEAVEVVLYLLK 378 (416)
T ss_dssp HHHHHCSEEEECCSSCSSCHHHHHHHHTTCCEEEESCHHHHHHCCB----------TTTEEEES--SHHHHHHHHHHHHH
T ss_pred HHHHhCCEEEECCCcCCCccHHHHHHHcCCCEEEccCCCChhheec----------CCCeEEEC--CHHHHHHHHHHHHh
Confidence 8999999999999999999999999999999999999999999988 88999997 89999999999886
Q ss_pred HhhhCHHHHHHHHHHH---HhhhCCHHHHHHHHHHHHHHhh
Q 008154 532 TYREHKSSWEGLMRRG---MEKDYTWENAAIQYEQVFEWAS 569 (576)
Q Consensus 532 ~~~~~~~~~~~~~~~a---~~~~fs~~~~~~~y~~~y~~~~ 569 (576)
|++.+.++++++ +.++|||++++++|.++|++++
T Consensus 379 ----~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~l~ 415 (416)
T 2x6q_A 379 ----HPEVSKEMGAKAKERVRKNFIITKHMERYLDILNSLG 415 (416)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHTC-
T ss_pred ----CHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhh
Confidence 888888888877 3468999999999999998765
No 15
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=100.00 E-value=1e-36 Score=315.40 Aligned_cols=363 Identities=15% Similarity=0.126 Sum_probs=254.7
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 145 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (576)
|||++++..+.| .||.++++.+++++|+++||+|+++++......
T Consensus 1 MkIl~i~~~~~~---~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~-------------------------------- 45 (374)
T 2iw1_A 1 MIVAFCLYKYFP---FGGLQRDFMRIASTVAARGHHVRVYTQSWEGDC-------------------------------- 45 (374)
T ss_dssp -CEEEECSEECT---TCHHHHHHHHHHHHHHHTTCCEEEEESEECSCC--------------------------------
T ss_pred CeEEEEEeecCC---CcchhhHHHHHHHHHHhCCCeEEEEecCCCCCC--------------------------------
Confidence 899999998777 599999999999999999999999996532210
Q ss_pred eecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHhh
Q 008154 146 YREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASK 225 (576)
Q Consensus 146 ~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~~ 225 (576)
.++++++.++.+.+ ....+...+...+.+.++.. +|||||+|.+.+++...+...
T Consensus 46 -~~~~~v~~~~~~~~---------------~~~~~~~~~~~~l~~~i~~~--------~~Dvv~~~~~~~~~~~~~~~~- 100 (374)
T 2iw1_A 46 -PKAFELIQVPVKSH---------------TNHGRNAEYYAWVQNHLKEH--------PADRVVGFNKMPGLDVYFAAD- 100 (374)
T ss_dssp -CTTCEEEECCCCCS---------------SHHHHHHHHHHHHHHHHHHS--------CCSEEEESSCCTTCSEEECCS-
T ss_pred -CCCcEEEEEccCcc---------------cchhhHHHHHHHHHHHHhcc--------CCCEEEEecCCCCceeeeccc-
Confidence 13667776653221 11222222333334443333 799999997544321000000
Q ss_pred ccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHH--hccceecc
Q 008154 226 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIV--TADRLLTV 303 (576)
Q Consensus 226 ~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~--~ad~v~~v 303 (576)
. ..++.+.+.|... .. ..... .....+++..+. .+|.++++
T Consensus 101 ~------~~~~~~~~~~~~~----------~~--~~~~~-------------------~~~~~~~~~~~~~~~~d~ii~~ 143 (374)
T 2iw1_A 101 V------CYAEKVAQEKGFL----------YR--LTSRY-------------------RHYAAFERATFEQGKSTKLMML 143 (374)
T ss_dssp C------CHHHHHHHHCCHH----------HH--TSHHH-------------------HHHHHHHHHHHSTTCCCEEEES
T ss_pred c------ccceeeeecccch----------hh--hcHHH-------------------HHHHHHHHHHhhccCCcEEEEc
Confidence 0 1122222223210 00 00000 000123343443 69999999
Q ss_pred CccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCC
Q 008154 304 SKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCP 383 (576)
Q Consensus 304 S~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 383 (576)
|+...+.+. ..++.+..++.+||||+|.+.|.+.... ..+..+++.++++ ++.+
T Consensus 144 s~~~~~~~~---------~~~~~~~~~~~vi~ngv~~~~~~~~~~~---------------~~~~~~~~~~~~~--~~~~ 197 (374)
T 2iw1_A 144 TDKQIADFQ---------KHYQTEPERFQILPPGIYPDRKYSEQIP---------------NSREIYRQKNGIK--EQQN 197 (374)
T ss_dssp CHHHHHHHH---------HHHCCCGGGEEECCCCCCGGGSGGGSCT---------------THHHHHHHHTTCC--TTCE
T ss_pred CHHHHHHHH---------HHhCCChhheEEecCCcCHHhcCcccch---------------hHHHHHHHHhCCC--CCCe
Confidence 998887753 2345556789999999998877654321 1245678889987 5678
Q ss_pred EEEEecccccccCHHHHHHHHHhhhc---CCcEEEEEeCCChhhHHHHHHHHHHh-cCceEEEccCChhHHHHHHhcCCE
Q 008154 384 LIGFIGRLDYQKGIDLIRLAAPEILA---DDIQFVMLGSGDPQFESWMRDTEATY-KDKYRGWVGFNVPISHRITAGCDI 459 (576)
Q Consensus 384 ~i~~~Gr~~~~Kg~~~ll~a~~~L~~---~~~~lii~G~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ll~~~Dv 459 (576)
+++|+||+.+.||++.+++|+..+.+ ++++|+|+|+++. +...+.+.+.. ..++. +.++..+ +..+++.||+
T Consensus 198 ~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~--~~~~~~~~~~~~~~~v~-~~g~~~~-~~~~~~~ad~ 273 (374)
T 2iw1_A 198 LLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKP--RKFEALAEKLGVRSNVH-FFSGRND-VSELMAAADL 273 (374)
T ss_dssp EEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSCC--HHHHHHHHHHTCGGGEE-EESCCSC-HHHHHHHCSE
T ss_pred EEEEeccchhhcCHHHHHHHHHHhHhccCCceEEEEEcCCCH--HHHHHHHHHcCCCCcEE-ECCCccc-HHHHHHhcCE
Confidence 99999999999999999999999865 3899999999862 44444444322 33454 4455444 5689999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeC-CCCHHHHHHHHHHHHHHhhhCHH
Q 008154 460 LLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFL-PLSEESMLTALRFAIRTYREHKS 538 (576)
Q Consensus 460 ~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~-~~d~~~la~~i~~~l~~~~~~~~ 538 (576)
+|+||.+|++|++++|||++|+|||+++.|+..|.+.+ +.+|++++ ++|+++++++|.+++. |++
T Consensus 274 ~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~----------~~~g~~~~~~~~~~~l~~~i~~l~~----~~~ 339 (374)
T 2iw1_A 274 LLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIAD----------ANCGTVIAEPFSQEQLNEVLRKALT----QSP 339 (374)
T ss_dssp EEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHH----------HTCEEEECSSCCHHHHHHHHHHHHH----CHH
T ss_pred EEeccccCCcccHHHHHHHCCCCEEEecCCCchhhhcc----------CCceEEeCCCCCHHHHHHHHHHHHc----ChH
Confidence 99999999999999999999999999999999999998 89999997 8899999999999986 888
Q ss_pred HHHHHHHHH--HhhhCCHHHHHHHHHHHHHHhh
Q 008154 539 SWEGLMRRG--MEKDYTWENAAIQYEQVFEWAS 569 (576)
Q Consensus 539 ~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~~~ 569 (576)
.+.++++++ ..++++|+.+++++.++++..+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 372 (374)
T 2iw1_A 340 LRMAWAENARHYADTQDLYSLPEKAADIITGGL 372 (374)
T ss_dssp HHHHHHHHHHHHHHHSCCSCHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhh
Confidence 888998887 3467899999999999887654
No 16
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=100.00 E-value=4e-35 Score=306.83 Aligned_cols=368 Identities=17% Similarity=0.184 Sum_probs=252.2
Q ss_pred hccCCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeE
Q 008154 60 AQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQE 139 (576)
Q Consensus 60 ~~~~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (576)
....++|||++++..++| ..||.++++..++++|+++||+|+++++....... +. +.
T Consensus 15 ~~~~~~MkIl~i~~~~~~--~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~-~~-~~------------------- 71 (406)
T 2gek_A 15 VPRGSHMRIGMVCPYSFD--VPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKL-PD-YV------------------- 71 (406)
T ss_dssp ------CEEEEECSSCTT--SCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCC-CT-TE-------------------
T ss_pred ccCCCcceEEEEeccCCC--CCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccC-Cc-cc-------------------
Confidence 344567999999976544 36999999999999999999999999976433200 00 00
Q ss_pred EEEEEeeecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHH
Q 008154 140 IAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVP 219 (576)
Q Consensus 140 ~~~~~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~ 219 (576)
...+ +++.++......+ +. + . .. ....+.+.++.. +|||||+|........
T Consensus 72 ------~~~~-~~~~~~~~~~~~~--~~------~-~-~~----~~~~l~~~l~~~--------~~Dii~~~~~~~~~~~ 122 (406)
T 2gek_A 72 ------VSGG-KAVPIPYNGSVAR--LR------F-G-PA----THRKVKKWIAEG--------DFDVLHIHEPNAPSLS 122 (406)
T ss_dssp ------EECC-CCC--------------------C-C-HH----HHHHHHHHHHHH--------CCSEEEEECCCSSSHH
T ss_pred ------ccCC-cEEeccccCCccc--cc------c-c-HH----HHHHHHHHHHhc--------CCCEEEECCccchHHH
Confidence 0011 2222210000000 00 0 0 00 111222222222 7999999987666554
Q ss_pred HHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccc
Q 008154 220 VLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADR 299 (576)
Q Consensus 220 ~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~ 299 (576)
..+... .++|+|++.|+... ... ..... ..+.+.+++.+|.
T Consensus 123 ~~~~~~-------~~~~~i~~~h~~~~-----~~~---------~~~~~------------------~~~~~~~~~~~d~ 163 (406)
T 2gek_A 123 MLALQA-------AEGPIVATFHTSTT-----KSL---------TLSVF------------------QGILRPYHEKIIG 163 (406)
T ss_dssp HHHHHH-------EESSEEEEECCCCC-----SHH---------HHHHH------------------HSTTHHHHTTCSE
T ss_pred HHHHHh-------cCCCEEEEEcCcch-----hhh---------hHHHH------------------HHHHHHHHhhCCE
Confidence 444332 36899999998521 110 00000 0122366789999
Q ss_pred eeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCC
Q 008154 300 LLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIR 379 (576)
Q Consensus 300 v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 379 (576)
++++|+...+.+. +.+ +..++ +||||+|.+.|.+.... .+++
T Consensus 164 ii~~s~~~~~~~~---------~~~--~~~~~-vi~~~v~~~~~~~~~~~------------------------~~~~-- 205 (406)
T 2gek_A 164 RIAVSDLARRWQM---------EAL--GSDAV-EIPNGVDVASFADAPLL------------------------DGYP-- 205 (406)
T ss_dssp EEESSHHHHHHHH---------HHH--SSCEE-ECCCCBCHHHHHTCCCC------------------------TTCS--
T ss_pred EEECCHHHHHHHH---------Hhc--CCCcE-EecCCCChhhcCCCchh------------------------hhcc--
Confidence 9999998877653 222 34578 99999997665443311 1122
Q ss_pred CCCCEEEEeccc-ccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhc
Q 008154 380 PDCPLIGFIGRL-DYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAG 456 (576)
Q Consensus 380 ~~~~~i~~~Gr~-~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 456 (576)
.+..+|+|+||+ .+.||++.+++|+..+.+ ++++|+|+|+++. +...+.+. .+..++.+....+.+.+..+|+.
T Consensus 206 ~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~~~~--~~l~~~~~-~~~~~v~~~g~~~~~~~~~~~~~ 282 (406)
T 2gek_A 206 REGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIVGRGDE--DELREQAG-DLAGHLRFLGQVDDATKASAMRS 282 (406)
T ss_dssp CSSCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEESCSCH--HHHHHHTG-GGGGGEEECCSCCHHHHHHHHHH
T ss_pred CCCeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEEcCCcH--HHHHHHHH-hccCcEEEEecCCHHHHHHHHHH
Confidence 245799999999 999999999999999976 5899999999963 44444333 33445554333355666789999
Q ss_pred CCEEEeCCC-CCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhh
Q 008154 457 CDILLMPSR-FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYRE 535 (576)
Q Consensus 457 ~Dv~v~ps~-~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~ 535 (576)
||++|+||. .|++|++++|||++|+|||+++.|+..|.+.+ +.+|++++++|+++++++|.+++.
T Consensus 283 adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~----------~~~g~~~~~~d~~~l~~~i~~l~~---- 348 (406)
T 2gek_A 283 ADVYCAPHLGGESFGIVLVEAMAAGTAVVASDLDAFRRVLAD----------GDAGRLVPVDDADGMAAALIGILE---- 348 (406)
T ss_dssp SSEEEECCCSCCSSCHHHHHHHHHTCEEEECCCHHHHHHHTT----------TTSSEECCTTCHHHHHHHHHHHHH----
T ss_pred CCEEEecCCCCCCCchHHHHHHHcCCCEEEecCCcHHHHhcC----------CCceEEeCCCCHHHHHHHHHHHHc----
Confidence 999999996 99999999999999999999999999999998 899999999999999999999986
Q ss_pred CHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHhhhCCC
Q 008154 536 HKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWASIDPP 573 (576)
Q Consensus 536 ~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~~~~~~~ 573 (576)
|++.+.++++++ ..++|+|++++++|.++|++++++.+
T Consensus 349 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 388 (406)
T 2gek_A 349 DDQLRAGYVARASERVHRYDWSVVSAQIMRVYETVSGAGI 388 (406)
T ss_dssp CHHHHHHHHHHHHHHGGGGBHHHHHHHHHHHHHHHCCTTC
T ss_pred CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhcc
Confidence 888888888877 33499999999999999999987554
No 17
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=100.00 E-value=9.1e-35 Score=305.25 Aligned_cols=231 Identities=16% Similarity=0.147 Sum_probs=185.8
Q ss_pred HHHHhcc--ceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHH
Q 008154 292 GAIVTAD--RLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIA 369 (576)
Q Consensus 292 ~a~~~ad--~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 369 (576)
..++.+| .++++|+...+.+.. +.. ..++.+||||+|.+.|. .
T Consensus 127 ~~~~~~~~~~ii~~S~~~~~~~~~----------~~~-~~~~~vi~ngvd~~~~~------------------------~ 171 (413)
T 3oy2_A 127 WIFSHPKVVGVMAMSKCWISDICN----------YGC-KVPINIVSHFVDTKTIY------------------------D 171 (413)
T ss_dssp GGGGCTTEEEEEESSTHHHHHHHH----------TTC-CSCEEECCCCCCCCCCT------------------------T
T ss_pred HHHhccCCceEEEcCHHHHHHHHH----------cCC-CCceEEeCCCCCHHHHH------------------------H
Confidence 3456777 999999998877642 232 57899999999988771 1
Q ss_pred HHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChh----hHHHHHHHHHHh--cCc---
Q 008154 370 LQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQ----FESWMRDTEATY--KDK--- 438 (576)
Q Consensus 370 ~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~----~~~~~~~~~~~~--~~~--- 438 (576)
.++.++++...+.++|+++||+.+.||++.+++|+..+.+ ++++|+|+|+|++. ..+..+.+.+.. ..+
T Consensus 172 ~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~ 251 (413)
T 3oy2_A 172 ARKLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTH 251 (413)
T ss_dssp HHHHTTCGGGTTSEEEECCSCSSGGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHH
T ss_pred HHHhcCCCcccCceEEEEcCCCchhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCccccccc
Confidence 3556777632368999999999999999999999999865 68999999999642 123333333332 222
Q ss_pred ---eEEEccC-ChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcc----
Q 008154 439 ---YRGWVGF-NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGT---- 510 (576)
Q Consensus 439 ---~~~~~~~-~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~---- 510 (576)
++.+.++ +.+.+..+|+.||++|+||.+|+||++++|||+||+|||+|+.||..|++.+ +.+
T Consensus 252 l~~vv~~~g~~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~g~~e~v~~----------~~~~~i~ 321 (413)
T 3oy2_A 252 LNKIMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVGGADDYFSG----------DCVYKIK 321 (413)
T ss_dssp HTTEEEECSCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEEEECCHHHHHHSCT----------TTSEEEC
T ss_pred ccceeeccCcCCHHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCCChHHHHcc----------Ccccccc
Confidence 4566675 6667778999999999999999999999999999999999999999999987 565
Q ss_pred -----------ee--EeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHH---hhhCCHHHHHHHHHHHHHHhhhCC
Q 008154 511 -----------GW--SFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGM---EKDYTWENAAIQYEQVFEWASIDP 572 (576)
Q Consensus 511 -----------G~--~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a~---~~~fs~~~~~~~y~~~y~~~~~~~ 572 (576)
|+ +++++|+++++++| +++. |++.+.++++++. .++|||++++++|.++|++++++.
T Consensus 322 ~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~l~~----~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~ 394 (413)
T 3oy2_A 322 PSAWISVDDRDGIGGIEGIIDVDDLVEAF-TFFK----DEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRVE 394 (413)
T ss_dssp CCEEEECTTTCSSCCEEEECCHHHHHHHH-HHTT----SHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC--
T ss_pred cccccccccccCcceeeCCCCHHHHHHHH-HHhc----CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhc
Confidence 99 99999999999999 8875 8888899988873 468999999999999999998643
No 18
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=100.00 E-value=1.2e-34 Score=296.57 Aligned_cols=317 Identities=15% Similarity=0.093 Sum_probs=234.0
Q ss_pred CceEEEEeec--------c---CCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEee
Q 008154 65 SYNIVFVTAE--------A---APYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICC 133 (576)
Q Consensus 65 ~mkI~~~s~e--------~---~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (576)
+|||++++.. + +| ...||.++++.+++++|+++||+|+++++......
T Consensus 3 ~mkIl~v~~~~~~~~~~~~~p~~p-~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~-------------------- 61 (342)
T 2iuy_A 3 PLKVALVNIPLRVPGSDAWISVPP-QGYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAG-------------------- 61 (342)
T ss_dssp CCEEEEECCCCBCTTSSSBCCSSC-SSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCC--------------------
T ss_pred ccEEEEEeccccccCcccccccCc-ccCChHHHHHHHHHHHHHHcCCeEEEEecCCCCCC--------------------
Confidence 5999999998 3 44 24699999999999999999999999987532210
Q ss_pred cCCeeEEEEEEeeecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCC
Q 008154 134 FGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDW 213 (576)
Q Consensus 134 ~~~~~~~~~~~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~ 213 (576)
.++++++.. .... .+.+.++.. +|||||+|.+
T Consensus 62 -------------~~~~~~~~~--------------------~~~~-------~l~~~l~~~--------~~Dvi~~~~~ 93 (342)
T 2iuy_A 62 -------------RPGLTVVPA--------------------GEPE-------EIERWLRTA--------DVDVVHDHSG 93 (342)
T ss_dssp -------------STTEEECSC--------------------CSHH-------HHHHHHHHC--------CCSEEEECSS
T ss_pred -------------CCcceeccC--------------------CcHH-------HHHHHHHhc--------CCCEEEECCc
Confidence 022332110 0011 122222222 7999999987
Q ss_pred ccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHH
Q 008154 214 HAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGA 293 (576)
Q Consensus 214 ~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 293 (576)
...+.. .+. .++| |+|.|+.....
T Consensus 94 ~~~~~~----~~~------~~~p-v~~~h~~~~~~--------------------------------------------- 117 (342)
T 2iuy_A 94 GVIGPA----GLP------PGTA-FISSHHFTTRP--------------------------------------------- 117 (342)
T ss_dssp SSSCST----TCC------TTCE-EEEEECSSSBC---------------------------------------------
T ss_pred hhhHHH----Hhh------cCCC-EEEecCCCCCc---------------------------------------------
Confidence 654422 111 5789 99999752100
Q ss_pred HHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHH
Q 008154 294 IVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 373 (576)
Q Consensus 294 ~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 373 (576)
..+|.++++|+..++.+. . ..++.+||||+|.+.|.+....
T Consensus 118 -~~~d~ii~~S~~~~~~~~-------------~-~~~~~vi~ngvd~~~~~~~~~~------------------------ 158 (342)
T 2iuy_A 118 -VNPVGCTYSSRAQRAHCG-------------G-GDDAPVIPIPVDPARYRSAADQ------------------------ 158 (342)
T ss_dssp -SCCTTEEESCHHHHHHTT-------------C-CTTSCBCCCCBCGGGSCCSTTC------------------------
T ss_pred -ccceEEEEcCHHHHHHHh-------------c-CCceEEEcCCCChhhcCccccc------------------------
Confidence 018999999998876652 1 5678999999998777654321
Q ss_pred cCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHH
Q 008154 374 LGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRI 453 (576)
Q Consensus 374 ~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 453 (576)
. ++..+|+|+||+.+.||++.+++|++.+ +++|+|+|+|+ ..+..+.+.+....++.+....+.+.+..+
T Consensus 159 --~---~~~~~i~~vG~~~~~Kg~~~li~a~~~~---~~~l~i~G~g~--~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~ 228 (342)
T 2iuy_A 159 --V---AKEDFLLFMGRVSPHKGALEAAAFAHAC---GRRLVLAGPAW--EPEYFDEITRRYGSTVEPIGEVGGERRLDL 228 (342)
T ss_dssp --C---CCCSCEEEESCCCGGGTHHHHHHHHHHH---TCCEEEESCCC--CHHHHHHHHHHHTTTEEECCCCCHHHHHHH
T ss_pred --C---CCCCEEEEEeccccccCHHHHHHHHHhc---CcEEEEEeCcc--cHHHHHHHHHHhCCCEEEeccCCHHHHHHH
Confidence 1 2456899999999999999999999998 89999999995 333444444444456654333356666789
Q ss_pred HhcCCEEEeCCC----------CCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHH
Q 008154 454 TAGCDILLMPSR----------FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESML 523 (576)
Q Consensus 454 l~~~Dv~v~ps~----------~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la 523 (576)
|+.||++|+||. .|++|++++|||++|+|||+++.|+..|++.+. ++.+|+++++ |+++++
T Consensus 229 ~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~--------~~~~g~~~~~-d~~~l~ 299 (342)
T 2iuy_A 229 LASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSV--------GEVVGYGTDF-APDEAR 299 (342)
T ss_dssp HHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGG--------EEECCSSSCC-CHHHHH
T ss_pred HHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhccc--------CCCceEEcCC-CHHHHH
Confidence 999999999999 799999999999999999999999999998630 0368999999 999999
Q ss_pred HHHHHHHHHhhhCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhhCCC
Q 008154 524 TALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASIDPP 573 (576)
Q Consensus 524 ~~i~~~l~~~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y~~~~~~~~ 573 (576)
++|.+++. .+.+++.+.++|||++++++|.++|++++++++
T Consensus 300 ~~i~~l~~---------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 340 (342)
T 2iuy_A 300 RTLAGLPA---------SDEVRRAAVRLWGHVTIAERYVEQYRRLLAGAT 340 (342)
T ss_dssp HHHHTSCC---------HHHHHHHHHHHHBHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHH---------HHHHHHHHHHhcCHHHHHHHHHHHHHHHHccCC
Confidence 99988753 222333356799999999999999999988765
No 19
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=100.00 E-value=3.3e-32 Score=291.91 Aligned_cols=468 Identities=15% Similarity=0.110 Sum_probs=297.6
Q ss_pred ccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCc------------------eeEEEeecCC---
Q 008154 78 YSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLG------------------CCMKICCFGG--- 136 (576)
Q Consensus 78 ~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~--- 136 (576)
..++||+|+++.++.++++++|.+.+.+|..|..|.+.|.. .+.++.+ ..+.|.+.|+
T Consensus 160 ~LGnGGLGrLAacfLdS~AtLglP~~GyGlrY~~G~F~Q~i-~dG~Q~E~pd~Wl~~g~pwe~~r~~~~~~V~f~G~v~~ 238 (879)
T 1ygp_A 160 GLGNGGLGRLAACFVDSMATEGIPAWGYGLRYEYGIFAQKI-IDGYQVETPDYWLNSGNPWEIERNEVQIPVTFYGYVDR 238 (879)
T ss_dssp CSCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEE-ETTEEEEECCCTTTTCCTTCEEEEEEEEEEEESCEEEC
T ss_pred CcCCCcHHHHHHHHHHHHHhCCCCeEEEEeeecCCceEEEe-eCCeeEEeccchhccCCcccccCCCceEEEeeCCEEee
Confidence 46799999999999999999999999999999999765543 2222210 1122322121
Q ss_pred -----------------------------------eeEEEEEEeeecCeEEEEec---CCC---------CCC--CCCCC
Q 008154 137 -----------------------------------EQEIAFFHEYREGVDWVFVD---HPS---------YHR--PGNPY 167 (576)
Q Consensus 137 -----------------------------------~~~~~~~~~~~~gv~v~~l~---~~~---------~~~--~~~~y 167 (576)
...+|+|...++. .+.++ ... ..+ +..+|
T Consensus 239 ~~~~~~G~~~~~w~~~~~v~av~yD~Pi~Gy~~~~~n~lRLW~a~~~~--~f~l~~fn~gdy~~a~~~~~~~e~IT~vLY 316 (879)
T 1ygp_A 239 PEGGKTTLSASQWIGGERVLAVAYDFPVPGFKTSNVNNLRLWQARPTT--EFDLNKFNNGDYKNSVAQQQRAESITAVLY 316 (879)
T ss_dssp C----CTTSCCEEECSEEEEEEEEEEEEECSSCCCEEEEEEEEEEESC--SCCHHHHHTTCHHHHTHHHHHHHHHHHSSS
T ss_pred ccccCCCcceeEeeCCcEEEEEEccccccCcCCCceEEEEEEEeccCc--ccchhhccCccHhHhhhChHhhhchhccCC
Confidence 1122222222222 11111 000 011 33588
Q ss_pred CCCCCCCCchHHHH---HHHHHHHHh-hcccCC-----CCCCCCCCccEEEeCCCccchHHHHHHhhcc-C----CCCCC
Q 008154 168 GDINGAFGDNQFRY---TLLCYAACE-APLVLP-----LGGFTYGEKCIFLVNDWHAGLVPVLLASKYR-P----HGVYK 233 (576)
Q Consensus 168 ~~~~~~~~~~~~r~---~~~~~~~~~-~~~~~~-----~~~~~~~~pDVvH~~~~~~~~~~~~l~~~~~-~----~~~~~ 233 (576)
++-. .+...+.|+ .+++.++++ +++++. +..+. ++.+||+||.|++++..-+.+.+. . +..+.
T Consensus 317 p~D~-~~~GkeLRLkQEyfl~sa~lqdilr~~~~~~~~l~~l~--~~~~ihlNDtHpalai~ELmR~L~d~~gl~wd~Aw 393 (879)
T 1ygp_A 317 PNDN-FAQGKELRLKQQYFWCAASLHDILRRFKKSKRPWTEFP--DQVAIQLNDTHPTLAIVELQRVLVDLEKLDWHEAW 393 (879)
T ss_dssp CCCS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGHH--HHEEEEEESSTTTHHHHHHHHHHHHTTCCCHHHHH
T ss_pred CCCC-CccchhhheehhhhhhhhHHHHHHHHHHHhCCChhhcC--CceEEEccCCcHHHHHHHHHHHHhhhcCCCHHHHH
Confidence 8610 011156677 566666654 222221 11111 578999999999987443332221 1 11111
Q ss_pred ---CCcEEEEeecCCCCC--CCChhhhhhc-CCC--------hhhhcc-------cccccccccccccCCcCccchhHHH
Q 008154 234 ---DARSILVIHNLSHQG--VEPAATYKNL-GLP--------SEWYGA-------LEWVFPTWARTHALDTGEAVNVLKG 292 (576)
Q Consensus 234 ---~~~~v~t~H~~~~~~--~~~~~~~~~~-~~~--------~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (576)
...++||+||+.+.+ .||.++++.+ +.. ..++.. ....+.+++.-........++|..+
T Consensus 394 ~iv~~t~~yTnHT~lpealE~wpv~l~~~lLpr~~~II~ein~~f~~~~~~~~~~d~~~~~~l~ii~~~~~~~~v~MA~L 473 (879)
T 1ygp_A 394 DIVTKTFAYTNHTVMQEALEKWPRRLFGHLLPRHLEIIYDINWFFLEDVAKKFPKDVDLLSRISIIEENSPERQIRMAFL 473 (879)
T ss_dssp HHHHHHEEEEECCCSGGGSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHSTTCTHHHHHHCSEECCSSSCEEEHHHH
T ss_pred HHHHHheeeecCcCchHhhccCCHHHHHHHCCcHHHHHHHHHHHHHHHHHHHcCCCHHHHHhcceeccCCCcceeehHHH
Confidence 126899999997665 5777766432 200 000000 0001111111111111247999999
Q ss_pred HHHhccceeccCccchhhhccccCCcchhhhhhccCC-ceeEecCCCCCCCCCCC---CCccccccCCc---CCcc----
Q 008154 293 AIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKS-VLNGITNGIDITEWNPS---SDEHIASHYSI---DDLS---- 361 (576)
Q Consensus 293 a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~-~i~vi~nGvd~~~~~~~---~~~~l~~~~~~---~~~~---- 361 (576)
|+..|..|++||+.+.+-+.+..+ ...+..-+. ++.-++|||+...|... ...++++.+.+ ..|.
T Consensus 474 Ai~~S~~vNGVs~LH~ev~k~~~f----~df~~l~P~~kf~n~TNGVt~rrWl~~~Np~L~~Li~~~iG~~~~~W~~d~~ 549 (879)
T 1ygp_A 474 AIVGSHKVNGVVELHSELIKTTIF----KDFIKFYGPSKFVNVTNGITPRRWLKQANPSLAKLISETLNDPTEEYLLDMA 549 (879)
T ss_dssp HHHHEEEEEESSHHHHHHHHHTTT----HHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHTTCTTCGGGTCGG
T ss_pred HHHhcCceeEehHHHHHHHHHHHh----HHHHHhCCCCcccCcCCCcCCchhhhhcCHHHHHHHHHhcCCChhhhhhCHH
Confidence 999999999999999877654433 333444455 89999999998888643 33344555555 4443
Q ss_pred --------------------cchHhH----HHHHHHc-CCCCC-----CCCCEEEEecccccccCHHH-HHHHHHhhhc-
Q 008154 362 --------------------GKVQCK----IALQKEL-GLPIR-----PDCPLIGFIGRLDYQKGIDL-IRLAAPEILA- 409 (576)
Q Consensus 362 --------------------~~~~~~----~~~~~~~-~i~~~-----~~~~~i~~~Gr~~~~Kg~~~-ll~a~~~L~~- 409 (576)
.+..++ ..+++.. |+..+ ++.+.++++.||..||+..+ ++..+.++.+
T Consensus 550 ~L~~l~~~~~D~~f~~~l~~iK~~nK~~La~~i~~~~~g~~ld~~~~~p~sLfdvq~KR~heYKRq~LniL~ii~ry~~I 629 (879)
T 1ygp_A 550 KLTQLEKYVEDKEFLKKWNQVKLNNKIRLVDLIKKENDGVDIINREYLDDTLFDMQVKRIHEYKRQQLNVFGIIYRYLAM 629 (879)
T ss_dssp GGGGGGGGGGCTHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSCSTTGGGCEEEEEESCCCGGGTHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEecCCCCCCCeeeeeeeehhhHhHHHHHHHHHHHHHHHHH
Confidence 222222 2345566 88888 88999999999999999999 7887665521
Q ss_pred -----------------CCcEEEEEeCCChhhHHHHHHHHH------------HhcC--ceEEEccCChhHHHHHHhcCC
Q 008154 410 -----------------DDIQFVMLGSGDPQFESWMRDTEA------------TYKD--KYRGWVGFNVPISHRITAGCD 458 (576)
Q Consensus 410 -----------------~~~~lii~G~g~~~~~~~~~~~~~------------~~~~--~~~~~~~~~~~~~~~ll~~~D 458 (576)
.|+++||+|+++|.+...+..++. ..++ +++++.+|+..++..++.+||
T Consensus 630 k~~~~~~~~p~~~~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~LKVVFlenY~VslAe~iipaaD 709 (879)
T 1ygp_A 630 KNMLKNGASIEEVARKYPRKVSIFGGKSAPGYYMAKLIIKLINCVADIVNNDESIEHLLKVVFVADYNVSKAEIIIPASD 709 (879)
T ss_dssp HHHHHTTCCHHHHHHHSCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCGGGTTSEEEEEETTCCHHHHHHHGGGCS
T ss_pred HhCccccCCCcccccCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhhCCceEEEEeCCCCHHHHHHhhhhhh
Confidence 479999999998877766665533 1333 799999999999999999999
Q ss_pred EEEeCCC--CCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCC--------------------
Q 008154 459 ILLMPSR--FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLP-------------------- 516 (576)
Q Consensus 459 v~v~ps~--~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~-------------------- 516 (576)
|+.+.|+ .|++|++.|++|.+|.++|+|.+|++.|+..+.+ .+|+|+|..
T Consensus 710 vseqistag~EASGTsnMKfalNGaLtlgtlDGanvEi~e~vG--------~eN~fiFG~~~~ev~~~~~~~~~~~y~~~ 781 (879)
T 1ygp_A 710 LSEHISTAGTEASGTSNMKFVMNGGLIIGTVDGANVEITREIG--------EDNVFLFGNLSENVEELRYNHQYHPQDLP 781 (879)
T ss_dssp EEEECCCTTCCSCCHHHHHHHTTTCEEEEESCTHHHHHHHHHC--------GGGSEEESCCHHHHHHHHHHHHHSCCCCC
T ss_pred hhhhCCCCCccccCchhhHHHHcCCeeeecccchhHHHHHHcC--------cccEEEccCCHHHHHHHHHhCchhccCCC
Confidence 9999998 7999999999999999999999999999985421 467787752
Q ss_pred -----------------C---CHHHHHHHHHH------HH---HHh----------hhCHH-HHHHHHHHHHh--hhCCH
Q 008154 517 -----------------L---SEESMLTALRF------AI---RTY----------REHKS-SWEGLMRRGME--KDYTW 554 (576)
Q Consensus 517 -----------------~---d~~~la~~i~~------~l---~~~----------~~~~~-~~~~~~~~a~~--~~fs~ 554 (576)
+ +...+.+.|.. ++ ..+ +.|++ .|.+++...++ -.||.
T Consensus 782 ~~l~~v~d~i~~g~f~~~~~~~f~~l~~~L~~~~D~y~vl~Df~sY~~~q~~v~~~Y~d~~~~W~~~~i~NiA~~G~FSS 861 (879)
T 1ygp_A 782 SSLDSVLSYIESGQFSPENPNEFKPLVDSIKYHGDYYLVSDDFESYLATHELVDQEFHNQRSEWLKKSVLSLANVGFFSS 861 (879)
T ss_dssp HHHHHHHHHTC--CCCTTSTTTTHHHHHHHHHSTTTTCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHGGGBH
T ss_pred HHHHHHHHHHhcCCCCCCChHHHHHHHHHHhcCCCeEEEeccHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHhcCccCc
Confidence 1 23333344432 22 122 34567 89998888753 48999
Q ss_pred HHHHHHHHH
Q 008154 555 ENAAIQYEQ 563 (576)
Q Consensus 555 ~~~~~~y~~ 563 (576)
++++++|.+
T Consensus 862 DRtI~eYa~ 870 (879)
T 1ygp_A 862 DRCIEEYSD 870 (879)
T ss_dssp HHHHHHHHH
T ss_pred hHHHHHHHH
Confidence 999999975
No 20
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=99.97 E-value=5.5e-31 Score=275.68 Aligned_cols=358 Identities=9% Similarity=0.018 Sum_probs=218.6
Q ss_pred CCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEE
Q 008154 63 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAF 142 (576)
Q Consensus 63 ~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (576)
.++|||++++..+.|....||.. .+.+++++|+++||+|+|+++..... .... ...
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~-~v~~la~~L~~~GheV~Vvt~~~~~~---~~~~-~~~------------------- 99 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGIS-TALKLFEQFDNKKFKKRIILTDATPN---PKDL-QSF------------------- 99 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHH-HHHHHHTTSCTTTCEEEEEESSCCCC---HHHH-GGG-------------------
T ss_pred CCCceEEEEeCCCCccccccHHH-HHHHHHHHHHHcCCceEEEEecCCCC---hHHH-Hhh-------------------
Confidence 46799999999988832347775 58899999999999999999764211 0000 000
Q ss_pred EEeeecCeEEEEecCCC-CCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHH
Q 008154 143 FHEYREGVDWVFVDHPS-YHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVL 221 (576)
Q Consensus 143 ~~~~~~gv~v~~l~~~~-~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~ 221 (576)
.+.....+.... +.. .+.. +.. .....+. ..+|||||+|.|.++.....
T Consensus 100 -----~~~~~~~~~~~~~~~~--~i~~-----~~~----------~~~~~~~--------~~~~Dvv~a~~~~~~~~~~~ 149 (413)
T 2x0d_A 100 -----KSFKYVMPEEDKDFAL--QIVP-----FND----------RYNRTIP--------VAKHDIFIATAWWTAYAAQR 149 (413)
T ss_dssp -----TTSEECCTTCCCCCSE--EEEE-----CSC----------CTTCCEE--------ECTTEEEEECSHHHHHHHHH
T ss_pred -----hccceeeccCCccccc--eeee-----ccc----------ccccccc--------CCCCCEEEEehHHHHHHHHH
Confidence 010000000000 000 0000 000 0000000 01689999998877665444
Q ss_pred HHhhcc-CCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhcc--
Q 008154 222 LASKYR-PHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTAD-- 298 (576)
Q Consensus 222 l~~~~~-~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad-- 298 (576)
+..+.. ..+ ....+.++.+|+.... + .+.... ..+.+..++.++
T Consensus 150 ~~~~~~~~~~-~~~~~~~~~v~~~~~~-------~--~~~~~~-----------------------~~~~~~~~~~~~~~ 196 (413)
T 2x0d_A 150 IVSWQSDTYG-IPPNKILYIIQDFEPG-------F--YQWSSQ-----------------------YVLAESTYKYRGPQ 196 (413)
T ss_dssp HHHHHHHHHT-CCCCCEEEEECSCGGG-------G--SCSSHH-----------------------HHHHHHTTSCCSCE
T ss_pred hhhhhhhhcc-cccCcEEEEEeechhh-------c--CccChH-----------------------HHHHHHHhccCCce
Confidence 321100 000 0245777777764210 0 000000 012233344444
Q ss_pred ceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCC
Q 008154 299 RLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPI 378 (576)
Q Consensus 299 ~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 378 (576)
.++++|+..++.+.+ .+....++.+++||+|.+.|.+.. .+ .
T Consensus 197 ~vi~~S~~~~~~l~~----------~g~~~~~~~~i~~g~d~~~~~~~~--------------------------~~-~- 238 (413)
T 2x0d_A 197 IAVFNSELLKQYFNN----------KGYNFTDEYFFQPKINTTLKNYIN--------------------------DK-R- 238 (413)
T ss_dssp EEEEESHHHHHHHHH----------HTCCCSEEEEECCCCCHHHHTTTT--------------------------SC-C-
T ss_pred EEEEcCHHHHHHHHH----------cCCCCCceEEeCCCcCchhhcccc--------------------------cc-c-
Confidence 588899998887642 122234688999999865433211 01 1
Q ss_pred CCCCCEEEEeccc-ccccCHHHHHHHHHhhhc--C---CcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHH
Q 008154 379 RPDCPLIGFIGRL-DYQKGIDLIRLAAPEILA--D---DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHR 452 (576)
Q Consensus 379 ~~~~~~i~~~Gr~-~~~Kg~~~ll~a~~~L~~--~---~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (576)
++...|+++||+ .+.||++.+++|++.+.+ + +++|+++|+++... .+ ....++.+....+.+.+..
T Consensus 239 -~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~~~~~l~ivG~~~~~~-----~l--~~~~~v~f~G~~~~~~l~~ 310 (413)
T 2x0d_A 239 -QKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRSNEWKIISVGEKHKDI-----AL--GKGIHLNSLGKLTLEDYAD 310 (413)
T ss_dssp -CCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTGGGCEEEEEESCCCCE-----EE--ETTEEEEEEESCCHHHHHH
T ss_pred -CCCCEEEEEecCchhccCHHHHHHHHHHHHHhCCCCCceEEEEEcCCchhh-----hc--CCcCcEEEcCCCCHHHHHH
Confidence 245678899997 589999999999999865 3 38999999986321 00 1122444333336677789
Q ss_pred HHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHH
Q 008154 453 ITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRT 532 (576)
Q Consensus 453 ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~ 532 (576)
+|+.||++|+||.+|+||++++||||||+|||++ .+|..|++.+ +.+|++++++|+++++++|.+++.
T Consensus 311 ~~~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~~-~~g~~e~v~~----------~~~G~lv~~~d~~~la~ai~~ll~- 378 (413)
T 2x0d_A 311 LLKRSSIGISLMISPHPSYPPLEMAHFGLRVITN-KYENKDLSNW----------HSNIVSLEQLNPENIAETLVELCM- 378 (413)
T ss_dssp HHHHCCEEECCCSSSSCCSHHHHHHHTTCEEEEE-CBTTBCGGGT----------BTTEEEESSCSHHHHHHHHHHHHH-
T ss_pred HHHhCCEEEEecCCCCCCcHHHHHHhCCCcEEEe-CCCcchhhhc----------CCCEEEeCCCCHHHHHHHHHHHHc-
Confidence 9999999999999999999999999999999995 5667899988 889999999999999999999987
Q ss_pred hhhCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhh
Q 008154 533 YREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASI 570 (576)
Q Consensus 533 ~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y~~~~~ 570 (576)
|++.+.+ +.+..+++|+|++++++ .+.|+++..
T Consensus 379 ---~~~~~~~-~~~~~~~~~~W~~~~~~-~~~~~~l~~ 411 (413)
T 2x0d_A 379 ---SFNNRDV-DKKESSNMMFYINEFNE-FSFIKEIEE 411 (413)
T ss_dssp ---HTC--------CCBSCGGGCCCC----TTHHHHHT
T ss_pred ---CHHHHHH-hHHHHHHhCCHHHHHHH-HHHHHHHHh
Confidence 3444444 22223468999999877 666766654
No 21
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=99.96 E-value=5.6e-29 Score=260.38 Aligned_cols=200 Identities=14% Similarity=0.148 Sum_probs=154.5
Q ss_pred hHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHH
Q 008154 289 VLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKI 368 (576)
Q Consensus 289 ~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 368 (576)
+++.+++.||.++++|+..++.+.. .. ++.+||||+|.+.|.+....
T Consensus 171 ~~~~~~~~ad~vi~~S~~~~~~~~~-------------~~-~i~vipngvd~~~f~~~~~~------------------- 217 (406)
T 2hy7_A 171 EFDRVAPTLDVIALVSPAMAAEVVS-------------RD-NVFHVGHGVDHNLDQLGDPS------------------- 217 (406)
T ss_dssp HHHHHGGGCSEEEESCGGGGGGCSC-------------ST-TEEECCCCBCTTHHHHHCSC-------------------
T ss_pred HHHHHHHhCCEEEEcCHHHHHHHHh-------------cC-CEEEEcCCcChHhcCccccc-------------------
Confidence 5677889999999999988876531 11 89999999998766432210
Q ss_pred HHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHH-HhcCceEEEccCCh
Q 008154 369 ALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEA-TYKDKYRGWVGFNV 447 (576)
Q Consensus 369 ~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 447 (576)
+ .++.++|+|+||+.+.||+ ++++.+. .++++|+|+|+|+ +++ ....++.+....+.
T Consensus 218 --------~-~~~~~~i~~vGrl~~~Kg~---~~~l~~~-~~~~~l~ivG~g~---------~~~~~l~~~V~f~G~~~~ 275 (406)
T 2hy7_A 218 --------P-YAEGIHAVAVGSMLFDPEF---FVVASKA-FPQVTFHVIGSGM---------GRHPGYGDNVIVYGEMKH 275 (406)
T ss_dssp --------S-CCSSEEEEEECCTTBCHHH---HHHHHHH-CTTEEEEEESCSS---------CCCTTCCTTEEEECCCCH
T ss_pred --------c-cCCCcEEEEEeccccccCH---HHHHHHh-CCCeEEEEEeCch---------HHhcCCCCCEEEcCCCCH
Confidence 1 1233789999999999998 4444332 3689999999985 111 23345654433355
Q ss_pred hHHHHHHhcCCEEEeCCCCCCCcHHHHHHH-------HcCCceEEeCccccccccccccccccCCCCCcceeE-eCCCCH
Q 008154 448 PISHRITAGCDILLMPSRFEPCGLNQLYAM-------RYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWS-FLPLSE 519 (576)
Q Consensus 448 ~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAm-------a~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~-~~~~d~ 519 (576)
+.+..+|+.||++|+||..|++|++++||| |||+|||+|+. +.+ +.+|++ ++++|+
T Consensus 276 ~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~------v~~----------~~~G~l~v~~~d~ 339 (406)
T 2hy7_A 276 AQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA------VVG----------PYKSRFGYTPGNA 339 (406)
T ss_dssp HHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG------GTC----------SCSSEEEECTTCH
T ss_pred HHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh------ccc----------CcceEEEeCCCCH
Confidence 667789999999999999999999999999 99999999988 555 689999 999999
Q ss_pred HHHHHHHHHHHHHhhhCHHHHHHHHHHHHhhhCCHHHHHHHHHHH--HHHhhh
Q 008154 520 ESMLTALRFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQV--FEWASI 570 (576)
Q Consensus 520 ~~la~~i~~~l~~~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~--y~~~~~ 570 (576)
++++++|.+++. |++ . ..+++|+|+++++++.++ |+++..
T Consensus 340 ~~la~ai~~ll~----~~~----~---~~~~~~sw~~~a~~~~~~~~y~~~~~ 381 (406)
T 2hy7_A 340 DSVIAAITQALE----APR----V---RYRQCLNWSDTTDRVLDPRAYPETRL 381 (406)
T ss_dssp HHHHHHHHHHHH----CCC----C---CCSCCCBHHHHHHHHHCGGGSGGGBS
T ss_pred HHHHHHHHHHHh----Ccc----h---hhhhcCCHHHHHHHHHHhhcccccCc
Confidence 999999999986 443 1 235789999999999999 887653
No 22
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=99.96 E-value=2.9e-27 Score=250.77 Aligned_cols=301 Identities=13% Similarity=0.082 Sum_probs=204.0
Q ss_pred CccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChh-hhhhcCCChhhhcc-cccccccccccccC
Q 008154 204 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAA-TYKNLGLPSEWYGA-LEWVFPTWARTHAL 281 (576)
Q Consensus 204 ~pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 281 (576)
.+||||+|++|..+++..+++.. +++|+++++|++ ||.. .++.+......+.. ....+..+
T Consensus 123 ~~DiV~vHdyhl~~l~~~lr~~~------~~~~i~~~~H~p-----fp~~~~~~~lp~~~~il~~ll~~d~i~f------ 185 (482)
T 1uqt_A 123 DDDIIWIHDYHLLPFAHELRKRG------VNNRIGFFLHIP-----FPTPEIFNALPTYDTLLEQLCDYDLLGF------ 185 (482)
T ss_dssp TTCEEEEESGGGTTHHHHHHHTT------CCSCEEEECCSC-----CCCHHHHTTSTTHHHHHHHHTTSSEEEE------
T ss_pred CCCEEEEECchHHHHHHHHHHhC------CCCcEEEEEcCC-----CCCHHHHhhCccHHHHHHhhhccCeEEE------
Confidence 46999999999988888887654 679999999987 3322 22222211111110 00000000
Q ss_pred CcCccchhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcc
Q 008154 282 DTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLS 361 (576)
Q Consensus 282 ~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~ 361 (576)
......+..++.|+.++++|......+. ..+ ...++.+||||||.+.|.+.... .
T Consensus 186 ---~~~~~~~~f~~~~~~~l~~~~~~~~~~~----------~~g-~~~~v~vip~GID~~~f~~~~~~-----------~ 240 (482)
T 1uqt_A 186 ---QTENDRLAFLDCLSNLTRVTTRSAKSHT----------AWG-KAFRTEVYPIGIEPKEIAKQAAG-----------P 240 (482)
T ss_dssp ---SSHHHHHHHHHHHHHHSCEEEETTTEEE----------ETT-EEEEEEECCCCCCHHHHHHHHHS-----------C
T ss_pred ---ECHHHHHHHHHHHHHHhCCccccCCeEE----------ECC-eEEEEEEEeccCCHHHHHHHhcC-----------c
Confidence 0112344555667777776664422211 111 34578999999998766432100 0
Q ss_pred cchHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--C----CcEEEEEeCCC----hhhHHHHHHH
Q 008154 362 GKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D----DIQFVMLGSGD----PQFESWMRDT 431 (576)
Q Consensus 362 ~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~----~~~lii~G~g~----~~~~~~~~~~ 431 (576)
.... ...+++.++ +..+|+++||+++.||++.+++|++++.+ + +++|+++|.+. +.+++..+.+
T Consensus 241 ~~~~-~~~lr~~~~-----~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~~~~~~~~l~~~l 314 (482)
T 1uqt_A 241 LPPK-LAQLKAELK-----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQL 314 (482)
T ss_dssp CCHH-HHHHHHHTT-----TCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHH
T ss_pred chHH-HHHHHHHhC-----CCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECCCccchHHHHHHHHHH
Confidence 0011 345666665 46799999999999999999999999865 2 47899999631 2233333333
Q ss_pred HH---Hhc--------CceEEEccC-ChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCC-----ceEEeCccccccc
Q 008154 432 EA---TYK--------DKYRGWVGF-NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGT-----IPVVHATGGLRDT 494 (576)
Q Consensus 432 ~~---~~~--------~~~~~~~~~-~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~-----pvIat~~gg~~e~ 494 (576)
.+ ..+ ..++++.+. +.+.+..+|+.||++|+||..|+||++++||||||+ |+|+|+.+|..+.
T Consensus 315 ~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~ 394 (482)
T 1uqt_A 315 ENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANE 394 (482)
T ss_dssp HHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGT
T ss_pred HHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHH
Confidence 22 211 135555443 667777999999999999999999999999999997 8999998887777
Q ss_pred cccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHH--hhhCCHHHHHHHHHHHHHHh
Q 008154 495 VENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGM--EKDYTWENAAIQYEQVFEWA 568 (576)
Q Consensus 495 i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a~--~~~fs~~~~~~~y~~~y~~~ 568 (576)
+ . +|++++|.|++++|++|.+++. .+++.+.++++++. .+.|||++++++|++.|+++
T Consensus 395 l-~------------~g~lv~p~d~~~lA~ai~~lL~---~~~~~r~~~~~~~~~~v~~~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 395 L-T------------SALIVNPYDRDEVAAALDRALT---MSLAERISRHAEMLDVIVKNDINHWQECFISDLKQI 454 (482)
T ss_dssp C-T------------TSEEECTTCHHHHHHHHHHHHT---CCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred h-C------------CeEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 6 2 6899999999999999999985 24566667776662 35799999999999999887
No 23
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.95 E-value=3.8e-27 Score=242.73 Aligned_cols=339 Identities=12% Similarity=-0.017 Sum_probs=220.7
Q ss_pred CceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCCCCCcccchhccccCceeEEEeecCCeeEEEEEE
Q 008154 65 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFH 144 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (576)
+|||++++. + .||....+..++++|+++||+|+++++.... . .....
T Consensus 6 ~mkIl~~~~---~---~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~--~-~~~~~------------------------ 52 (364)
T 1f0k_A 6 GKRLMVMAG---G---TGGHVFPGLAVAHHLMAQGWQVRWLGTADRM--E-ADLVP------------------------ 52 (364)
T ss_dssp -CEEEEECC---S---SHHHHHHHHHHHHHHHTTTCEEEEEECTTST--H-HHHGG------------------------
T ss_pred CcEEEEEeC---C---CccchhHHHHHHHHHHHcCCEEEEEecCCcc--h-hhhcc------------------------
Confidence 489999972 2 5899999999999999999999999875321 0 00011
Q ss_pred eeecCeEEEEecCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhcccCCCCCCCCCCccEEEeCCCccchHHHHHHh
Q 008154 145 EYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLAS 224 (576)
Q Consensus 145 ~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~pDVvH~~~~~~~~~~~~l~~ 224 (576)
..|++++.++.+.+.+.. .... + .....+........+.++.. +|||||+|.....+...+...
T Consensus 53 --~~g~~~~~~~~~~~~~~~-~~~~----~-~~~~~~~~~~~~l~~~l~~~--------~pDvv~~~~~~~~~~~~~~~~ 116 (364)
T 1f0k_A 53 --KHGIEIDFIRISGLRGKG-IKAL----I-AAPLRIFNAWRQARAIMKAY--------KPDVVLGMGGYVSGPGGLAAW 116 (364)
T ss_dssp --GGTCEEEECCCCCCTTCC-HHHH----H-TCHHHHHHHHHHHHHHHHHH--------CCSEEEECSSTTHHHHHHHHH
T ss_pred --ccCCceEEecCCccCcCc-cHHH----H-HHHHHHHHHHHHHHHHHHhc--------CCCEEEEeCCcCchHHHHHHH
Confidence 035666666533221100 0000 0 00111111122233333322 799999997554443333332
Q ss_pred hccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhcccccccccccccccCCcCccchhHHHHHHhccceeccC
Q 008154 225 KYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 304 (576)
Q Consensus 225 ~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ad~v~~vS 304 (576)
. .++|+|++.|+.. +. . ..+...+.+|.+++.|
T Consensus 117 -~------~~~p~v~~~~~~~-----~~-----------~------------------------~~~~~~~~~d~v~~~~ 149 (364)
T 1f0k_A 117 -S------LGIPVVLHEQNGI-----AG-----------L------------------------TNKWLAKIATKVMQAF 149 (364)
T ss_dssp -H------TTCCEEEEECSSS-----CC-----------H------------------------HHHHHTTTCSEEEESS
T ss_pred -H------cCCCEEEEecCCC-----Cc-----------H------------------------HHHHHHHhCCEEEecC
Confidence 2 4799999999641 10 0 1122335789988876
Q ss_pred ccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCC-
Q 008154 305 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCP- 383 (576)
Q Consensus 305 ~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~- 383 (576)
+.. ++ ++.+++||++...+.+.. .++.++++ ++..
T Consensus 150 ~~~----------------~~----~~~~i~n~v~~~~~~~~~----------------------~~~~~~~~--~~~~~ 185 (364)
T 1f0k_A 150 PGA----------------FP----NAEVVGNPVRTDVLALPL----------------------PQQRLAGR--EGPVR 185 (364)
T ss_dssp TTS----------------SS----SCEECCCCCCHHHHTSCC----------------------HHHHHTTC--CSSEE
T ss_pred hhh----------------cC----CceEeCCccchhhcccch----------------------hhhhcccC--CCCcE
Confidence 521 11 567999999866554321 12345554 3444
Q ss_pred EEEEecccccccCHHHHHHHHHhhhcCCcE-EEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEe
Q 008154 384 LIGFIGRLDYQKGIDLIRLAAPEILADDIQ-FVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLM 462 (576)
Q Consensus 384 ~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~-lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ 462 (576)
++++.|++.+.|+.+.+++|++.+.+ +++ ++++|+++ .++..+.+.+....++. +.++.. ....+|+.||++|.
T Consensus 186 il~~~g~~~~~k~~~~li~a~~~l~~-~~~~l~i~G~~~--~~~l~~~~~~~~~~~v~-~~g~~~-~~~~~~~~ad~~v~ 260 (364)
T 1f0k_A 186 VLVVGGSQGARILNQTMPQVAAKLGD-SVTIWHQSGKGS--QQSVEQAYAEAGQPQHK-VTEFID-DMAAAYAWADVVVC 260 (364)
T ss_dssp EEEECTTTCCHHHHHHHHHHHHHHGG-GEEEEEECCTTC--HHHHHHHHHHTTCTTSE-EESCCS-CHHHHHHHCSEEEE
T ss_pred EEEEcCchHhHHHHHHHHHHHHHhcC-CcEEEEEcCCch--HHHHHHHHhhcCCCceE-Eecchh-hHHHHHHhCCEEEE
Confidence 55667899999999999999999966 788 57789886 34444444332213443 455543 35579999999999
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEeCccccc--------cccccccccccCCCCCcceeEeCCCC--HHHHHHHHHHHHHH
Q 008154 463 PSRFEPCGLNQLYAMRYGTIPVVHATGGLR--------DTVENFNPFAREGSGEGTGWSFLPLS--EESMLTALRFAIRT 532 (576)
Q Consensus 463 ps~~E~~g~s~lEAma~G~pvIat~~gg~~--------e~i~~~~~~~~~~~~~~~G~~~~~~d--~~~la~~i~~~l~~ 532 (576)
||- |++++|||++|+|+|+++.+|.+ +++.+ ++|++++++| +++++++|.++
T Consensus 261 ~sg----~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~-----------g~g~~~~~~d~~~~~la~~i~~l--- 322 (364)
T 1f0k_A 261 RSG----ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA-----------GAAKIIEQPQLSVDAVANTLAGW--- 322 (364)
T ss_dssp CCC----HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT-----------TSEEECCGGGCCHHHHHHHHHTC---
T ss_pred CCc----hHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhC-----------CcEEEeccccCCHHHHHHHHHhc---
Confidence 983 99999999999999999999864 34443 4699999887 88888887765
Q ss_pred hhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHhh
Q 008154 533 YREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWAS 569 (576)
Q Consensus 533 ~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~~~ 569 (576)
|++.+.++++++ ..+.|+|++++++|.++|++..
T Consensus 323 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~ 358 (364)
T 1f0k_A 323 ---SRETLLTMAERARAASIPDATERVANEVSRVARALE 358 (364)
T ss_dssp ---CHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHTTC-
T ss_pred ---CHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHH
Confidence 678888888877 3468999999999999997643
No 24
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.95 E-value=8.2e-26 Score=247.11 Aligned_cols=211 Identities=10% Similarity=0.049 Sum_probs=158.1
Q ss_pred hccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHHHHHHHcC
Q 008154 296 TADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELG 375 (576)
Q Consensus 296 ~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 375 (576)
.+|.++++|+.... ...++.+|||++......+.... ...++.+|
T Consensus 328 ~~d~~i~~s~~~~~-----------------~~~~i~~ipn~~~~~~~~~~~~~------------------~~~r~~~~ 372 (568)
T 2vsy_A 328 LGDAFALPPALEPF-----------------YSEHVLRLQGAFQPSDTSRVVAE------------------PPSRTQCG 372 (568)
T ss_dssp EECTTTSCTTTGGG-----------------CSSEEEECSSCSCCCCTTCCCCC------------------CCCTGGGT
T ss_pred EECCCcCCcccccC-----------------CcceeEcCCCcCCCCCCCCCCCC------------------CCCccccC
Confidence 47999999885331 12678999996553322111110 11245577
Q ss_pred CCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEe-CCChhhHHHHHHHHHH-hc-CceEEEccC-ChhH
Q 008154 376 LPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLG-SGDPQFESWMRDTEAT-YK-DKYRGWVGF-NVPI 449 (576)
Q Consensus 376 i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G-~g~~~~~~~~~~~~~~-~~-~~~~~~~~~-~~~~ 449 (576)
++ ++ .+++++||+.+ ||++.+++|+.++.+ ++++|+|+| +|+ ..+...+.+.+. .. .++. +.|+ +.+.
T Consensus 373 ~~--~~-~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~l~i~G~~g~-~~~~l~~~~~~~~l~~~~v~-~~g~~~~~~ 446 (568)
T 2vsy_A 373 LP--EQ-GVVLCCFNNSY-KLNPQSMARMLAVLREVPDSVLWLLSGPGE-ADARLRAFAHAQGVDAQRLV-FMPKLPHPQ 446 (568)
T ss_dssp CC--TT-SCEEEECCCGG-GCCHHHHHHHHHHHHHCTTCEEEEECCSTT-HHHHHHHHHHHTTCCGGGEE-EECCCCHHH
T ss_pred CC--CC-CEEEEeCCccc-cCCHHHHHHHHHHHHhCCCcEEEEecCCHH-HHHHHHHHHHHcCCChhHEE-eeCCCCHHH
Confidence 76 33 35669999999 999999999999854 689999999 664 334444444432 22 3455 4454 4456
Q ss_pred HHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEE-------eCcc-------ccccccccccccccCCCCCcceeEeC
Q 008154 450 SHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVV-------HATG-------GLRDTVENFNPFAREGSGEGTGWSFL 515 (576)
Q Consensus 450 ~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIa-------t~~g-------g~~e~i~~~~~~~~~~~~~~~G~~~~ 515 (576)
...+|+.+|++|+||.+ ++|++++|||+||+|||+ |+.| |.+|++.+
T Consensus 447 ~~~~~~~adv~v~ps~~-~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~~------------------ 507 (568)
T 2vsy_A 447 YLARYRHADLFLDTHPY-NAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNVA------------------ 507 (568)
T ss_dssp HHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBCS------------------
T ss_pred HHHHHhcCCEEeeCCCC-CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhhcC------------------
Confidence 67899999999999999 999999999999999999 9999 88887642
Q ss_pred CCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH---H--hhhCCHHHHHHHHHHHHHHhhhCC
Q 008154 516 PLSEESMLTALRFAIRTYREHKSSWEGLMRRG---M--EKDYTWENAAIQYEQVFEWASIDP 572 (576)
Q Consensus 516 ~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a---~--~~~fs~~~~~~~y~~~y~~~~~~~ 572 (576)
|+++++++|.+++. |++.+.++++++ + .+.|+|++++++|.++|++++...
T Consensus 508 --~~~~la~~i~~l~~----~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~~~~~ 563 (568)
T 2vsy_A 508 --DDAAFVAKAVALAS----DPAALTALHARVDVLRRASGVFHMDGFADDFGALLQALARRH 563 (568)
T ss_dssp --SHHHHHHHHHHHHH----CHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHTT
T ss_pred --CHHHHHHHHHHHhc----CHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 89999999998876 888888888776 2 367999999999999999988653
No 25
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.93 E-value=3.4e-25 Score=228.97 Aligned_cols=218 Identities=14% Similarity=0.035 Sum_probs=157.4
Q ss_pred HHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCC-CCCCCCCCCCCccccccCCcCCcccchHhHHHHHH
Q 008154 294 IVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNG-IDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQK 372 (576)
Q Consensus 294 ~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nG-vd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 372 (576)
.+.+|.++++|+..++.+.. .+.+..++.+|+|| +|...+.+.... +..+++
T Consensus 148 ~~~~d~ii~~s~~~~~~~~~----------~g~~~~~i~vi~n~~~d~~~~~~~~~~-----------------~~~~~~ 200 (375)
T 3beo_A 148 GVMADLHFSPTAKSATNLQK----------ENKDESRIFITGNTAIDALKTTVKETY-----------------SHPVLE 200 (375)
T ss_dssp HHHCSEEEESSHHHHHHHHH----------TTCCGGGEEECCCHHHHHHHHHCCSSC-----------------CCHHHH
T ss_pred hhhhheeeCCCHHHHHHHHH----------cCCCcccEEEECChhHhhhhhhhhhhh-----------------hHHHHH
Confidence 34699999999988776531 23445689999999 775544322100 012233
Q ss_pred HcCCCCCCCCCEEEEecccccc-cCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhc--CceEEEccCCh
Q 008154 373 ELGLPIRPDCPLIGFIGRLDYQ-KGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYK--DKYRGWVGFNV 447 (576)
Q Consensus 373 ~~~i~~~~~~~~i~~~Gr~~~~-Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 447 (576)
.+ + ++.++++++||+.+. ||++.+++|++++.+ +++++++ |.++. ....+.+.+... .++.+......
T Consensus 201 ~~--~--~~~~vl~~~gr~~~~~K~~~~li~a~~~l~~~~~~~~~i~-~~g~~--~~~~~~~~~~~~~~~~v~~~g~~~~ 273 (375)
T 3beo_A 201 KL--G--NNRLVLMTAHRRENLGEPMRNMFRAIKRLVDKHEDVQVVY-PVHMN--PVVRETANDILGDYGRIHLIEPLDV 273 (375)
T ss_dssp TT--T--TSEEEEEECCCGGGTTHHHHHHHHHHHHHHHHCTTEEEEE-ECCSC--HHHHHHHHHHHTTCTTEEEECCCCH
T ss_pred hc--c--CCCeEEEEecccccchhHHHHHHHHHHHHHhhCCCeEEEE-eCCCC--HHHHHHHHHHhhccCCEEEeCCCCH
Confidence 22 2 345678899999875 999999999999865 5788654 65532 223333333222 35544332334
Q ss_pred hHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCc-cccccccccccccccCCCCCcceeEeCCCCHHHHHHHH
Q 008154 448 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT-GGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTAL 526 (576)
Q Consensus 448 ~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~-gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i 526 (576)
.....+|+.||++|.|| |.+++|||++|+|||+++. |+.+|++.+ | +|+++++ |+++++++|
T Consensus 274 ~~~~~~~~~ad~~v~~s-----g~~~lEA~a~G~Pvi~~~~~~~~~e~v~~----------g-~g~~v~~-d~~~la~~i 336 (375)
T 3beo_A 274 IDFHNVAARSYLMLTDS-----GGVQEEAPSLGVPVLVLRDTTERPEGIEA----------G-TLKLAGT-DEETIFSLA 336 (375)
T ss_dssp HHHHHHHHTCSEEEECC-----HHHHHHHHHHTCCEEECSSCCSCHHHHHT----------T-SEEECCS-CHHHHHHHH
T ss_pred HHHHHHHHhCcEEEECC-----CChHHHHHhcCCCEEEecCCCCCceeecC----------C-ceEEcCC-CHHHHHHHH
Confidence 45668999999999998 7889999999999999965 899999877 5 9999976 999999999
Q ss_pred HHHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHH
Q 008154 527 RFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 527 ~~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~ 566 (576)
.+++. |++.+.+|++++ ..+.|+|+++++.+.+.++
T Consensus 337 ~~ll~----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 374 (375)
T 3beo_A 337 DELLS----DKEAHDKMSKASNPYGDGRASERIVEAILKHFN 374 (375)
T ss_dssp HHHHH----CHHHHHHHCCCCCTTCCSCHHHHHHHHHHHHTT
T ss_pred HHHHh----ChHhHhhhhhcCCCCCCCcHHHHHHHHHHHHhh
Confidence 99886 888888888766 3457999999999987653
No 26
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.92 E-value=8.3e-25 Score=226.94 Aligned_cols=234 Identities=11% Similarity=-0.016 Sum_probs=160.6
Q ss_pred HHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCC-CCCCCCCCCCccccccCCcCCcccchHhHHHHHH
Q 008154 294 IVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGI-DITEWNPSSDEHIASHYSIDDLSGKVQCKIALQK 372 (576)
Q Consensus 294 ~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGv-d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 372 (576)
.+.+|.++++|+...+.+.. .+.+..++.+++||+ |...+.+.... .....+..+++
T Consensus 139 ~~~~d~ii~~s~~~~~~l~~----------~g~~~~~i~vi~n~~~d~~~~~~~~~~------------~~~~~~~~~~~ 196 (384)
T 1vgv_A 139 GHLAMYHFSPTETSRQNLLR----------ENVADSRIFITGNTVIDALLWVRDQVM------------SSDKLRSELAA 196 (384)
T ss_dssp HTTCSEEEESSHHHHHHHHH----------TTCCGGGEEECCCHHHHHHHHHHHHTT------------TCHHHHHHHHT
T ss_pred HhhccEEEcCcHHHHHHHHH----------cCCChhhEEEeCChHHHHHHhhhhccc------------cchhhhHHHHH
Confidence 35699999999988766531 233456799999995 42111100000 00000124455
Q ss_pred HcC-CCCCCCCCEEEEecccccc-cCHHHHHHHHHhhhc--CCcEEEEE-eCCChhhHHHHHHHHHHhcCceEEEccCCh
Q 008154 373 ELG-LPIRPDCPLIGFIGRLDYQ-KGIDLIRLAAPEILA--DDIQFVML-GSGDPQFESWMRDTEATYKDKYRGWVGFNV 447 (576)
Q Consensus 373 ~~~-i~~~~~~~~i~~~Gr~~~~-Kg~~~ll~a~~~L~~--~~~~lii~-G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (576)
.+| ++. ++..+++++||+.+. ||++.+++|+..+.+ ++++++++ |.+ +...+..+..... ..++.+......
T Consensus 197 ~~~~~~~-~~~~vl~~~gr~~~~~kg~~~li~a~~~l~~~~~~~~l~i~~g~~-~~~~~~l~~~~~~-~~~v~~~g~~~~ 273 (384)
T 1vgv_A 197 NYPFIDP-DKKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLN-PNVREPVNRILGH-VKNVILIDPQEY 273 (384)
T ss_dssp TCTTCCT-TSEEEEEECCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBC-HHHHHHHHHHHTT-CTTEEEECCCCH
T ss_pred hccccCC-CCCEEEEEeCCccccchHHHHHHHHHHHHHhhCCCeEEEEEcCCC-HHHHHHHHHHhhc-CCCEEEeCCCCH
Confidence 666 641 234678899999876 999999999999865 57898886 443 2222322222111 235544321223
Q ss_pred hHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCc-cccccccccccccccCCCCCcceeEeCCCCHHHHHHHH
Q 008154 448 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT-GGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTAL 526 (576)
Q Consensus 448 ~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~-gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i 526 (576)
+.+..+|+.||++|.|| |.+++|||++|+|||+++. |+..|++.+ | +|+++++ |+++++++|
T Consensus 274 ~~~~~~~~~ad~~v~~S-----g~~~lEA~a~G~PvI~~~~~~~~~e~v~~----------g-~g~lv~~-d~~~la~~i 336 (384)
T 1vgv_A 274 LPFVWLMNHAWLILTDS-----GGIQEEAPSLGKPVLVMRDTTERPEAVTA----------G-TVRLVGT-DKQRIVEEV 336 (384)
T ss_dssp HHHHHHHHHCSEEEESS-----STGGGTGGGGTCCEEEESSCCSCHHHHHH----------T-SEEEECS-SHHHHHHHH
T ss_pred HHHHHHHHhCcEEEECC-----cchHHHHHHcCCCEEEccCCCCcchhhhC----------C-ceEEeCC-CHHHHHHHH
Confidence 45668999999999999 4458999999999999986 999999877 6 9999987 999999999
Q ss_pred HHHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHhhhCCC
Q 008154 527 RFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWASIDPP 573 (576)
Q Consensus 527 ~~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~~~~~~~ 573 (576)
.+++. |++.+.+|++++ ....|+|+++++.+.+.|.+.++...
T Consensus 337 ~~ll~----d~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 381 (384)
T 1vgv_A 337 TRLLK----DENEYQAMSRAHNPYGDGQACSRILEALKNNRISLGSHHH 381 (384)
T ss_dssp HHHHH----CHHHHHHHHSSCCTTCCSCHHHHHHHHHHHTCCCC-----
T ss_pred HHHHh----ChHHHhhhhhccCCCcCCCHHHHHHHHHHHHHHhhccccc
Confidence 99886 888888888766 34679999999999999887776543
No 27
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.92 E-value=7.4e-24 Score=198.92 Aligned_cols=184 Identities=29% Similarity=0.499 Sum_probs=145.6
Q ss_pred EecCCCCCCCCC--CCCCccccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEEEecccc-cccCHHHHHHHHHhhh-
Q 008154 333 GITNGIDITEWN--PSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLD-YQKGIDLIRLAAPEIL- 408 (576)
Q Consensus 333 vi~nGvd~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~-~~Kg~~~ll~a~~~L~- 408 (576)
.||||||.+.|. +.... ....+..+++.++++ +..+|+|+||+. +.||++.+++|+..+.
T Consensus 1 gipngvd~~~f~~~~~~~~-------------~~~~~~~~r~~~~~~---~~~~i~~~G~~~~~~K~~~~li~a~~~l~~ 64 (200)
T 2bfw_A 1 GSHNGIDCSFWNESYLTGS-------------RDERKKSLLSKFGMD---EGVTFMFIGRFDRGQKGVDVLLKAIEILSS 64 (200)
T ss_dssp ----CCCTTTSSGGGSCSC-------------HHHHHHHHHHHTTCC---SCEEEEEESCBCSSSSCHHHHHHHHHHHTT
T ss_pred CCCCccChhhccccccccc-------------hhhHHHHHHHHcCCC---CCCEEEEeeccccccCCHHHHHHHHHHHHh
Confidence 379999999887 65420 011245678889987 345999999999 9999999999999995
Q ss_pred -c--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccC-ChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceE
Q 008154 409 -A--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPV 484 (576)
Q Consensus 409 -~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvI 484 (576)
+ ++++|+|+|.+++......+...+... ++.+..++ +.+.+..+++.||++|+||.+|++|++++|||++|+|||
T Consensus 65 ~~~~~~~~l~i~G~~~~~~~~~l~~~~~~~~-~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI 143 (200)
T 2bfw_A 65 KKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPI 143 (200)
T ss_dssp SGGGGGEEEEEECCBCHHHHHHHHHHHHHCT-TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEE
T ss_pred hccCCCeEEEEECCCChHHHHHHHHHHHhcC-CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCEE
Confidence 4 589999999986434444444444444 66541444 556677899999999999999999999999999999999
Q ss_pred EeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH
Q 008154 485 VHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG 547 (576)
Q Consensus 485 at~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a 547 (576)
+++.|+..|.+ + +.+|++++++|+++++++|.+++. -|++.+.++++++
T Consensus 144 ~~~~~~~~e~~-~----------~~~g~~~~~~~~~~l~~~i~~l~~---~~~~~~~~~~~~a 192 (200)
T 2bfw_A 144 ASAVGGLRDII-T----------NETGILVKAGDPGELANAILKALE---LSRSDLSKFRENC 192 (200)
T ss_dssp EESCHHHHHHC-C----------TTTCEEECTTCHHHHHHHHHHHHH---CCHHHHHHHHHHH
T ss_pred EeCCCChHHHc-C----------CCceEEecCCCHHHHHHHHHHHHh---cCHHHHHHHHHHH
Confidence 99999999999 7 789999999999999999998873 1788888888877
No 28
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=99.92 E-value=1.9e-23 Score=218.88 Aligned_cols=287 Identities=16% Similarity=0.134 Sum_probs=198.1
Q ss_pred ccEEEeCCCccchHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChh-hhhhcCCChhhhcccccccccccccccCCc
Q 008154 205 KCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAA-TYKNLGLPSEWYGALEWVFPTWARTHALDT 283 (576)
Q Consensus 205 pDVvH~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (576)
-|+|.+||.|..++|.+++++. +++++.|.+|.+ ||.. .++.+. ..+
T Consensus 150 ~D~VwVhDYhL~llp~~lR~~~------~~~~igfFlHiP-----fPs~e~f~~Lp--~~~------------------- 197 (496)
T 3t5t_A 150 DPVYLVHDYQLVGVPALLREQR------PDAPILLFVHIP-----WPSADYWRILP--KEI------------------- 197 (496)
T ss_dssp SCEEEEESGGGTTHHHHHHHHC------TTSCEEEECCSC-----CCCHHHHTTSC--HHH-------------------
T ss_pred CCEEEEeCccHhHHHHHHHhhC------CCCeEEEEEcCC-----CCCHHHHhhCc--HhH-------------------
Confidence 4899999999999999999876 789999999998 4433 223222 100
Q ss_pred CccchhHHHHHHhccceeccCccchhhhccccCCcchhhhh--------------hccCCceeEecCCCCCCCCCCCCCc
Q 008154 284 GEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEIL--------------SSRKSVLNGITNGIDITEWNPSSDE 349 (576)
Q Consensus 284 ~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~--------------~~~~~~i~vi~nGvd~~~~~~~~~~ 349 (576)
..-...++..||.|.+-+..+.+.+.+. ....+ .....++.++|+|||+..|.+....
T Consensus 198 ---r~ell~gll~~DligF~t~~y~~~Fl~~-----~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~ 269 (496)
T 3t5t_A 198 ---RTGILHGMLPATTIGFFADRWCRNFLES-----VADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQ 269 (496)
T ss_dssp ---HHHHHHHHTTSSEEEESSHHHHHHHHHH-----HHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CC
T ss_pred ---HHHHHHHHHhCCEEEEecHHHHHHHHHH-----HHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHH
Confidence 0112234456677766666555432110 00111 1123468999999999888764321
Q ss_pred cccccCCcCCcccchHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--C---CcEEEEEeCC----
Q 008154 350 HIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D---DIQFVMLGSG---- 420 (576)
Q Consensus 350 ~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~---~~~lii~G~g---- 420 (576)
+ ...+++.++ +..+|+++||+++.||++.+|+|+ ++.+ + ++.|+++|..
T Consensus 270 ----------~------~~~lr~~~~-----~~~lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~~~v~Lv~Vg~psr~~ 327 (496)
T 3t5t_A 270 ----------L------PEGIEEWAD-----GHRLVVHSGRTDPIKNAERAVRAF-VLAARGGGLEKTRMLVRMNPNRLY 327 (496)
T ss_dssp ----------C------CTTHHHHHT-----TSEEEEEEEESSGGGCHHHHHHHH-HHHHHTSSCTTEEEEEEEECCCTT
T ss_pred ----------H------HHHHHHHhC-----CceEEEEcccCccccCHHHHHHHH-HHHHhCcccceEEEEEEECCCCCC
Confidence 0 133455554 468999999999999999999999 7754 3 3678888742
Q ss_pred ChhhHHHHHHHHH---HhcC-----ceEEEccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcC---CceEEeCcc
Q 008154 421 DPQFESWMRDTEA---TYKD-----KYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYG---TIPVVHATG 489 (576)
Q Consensus 421 ~~~~~~~~~~~~~---~~~~-----~~~~~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G---~pvIat~~g 489 (576)
.+.+.+..+.+.+ ..+. .+.+....+.+....+|+.||++++||.+|+||++++|||||| .|+|.|..+
T Consensus 328 ~~~y~~l~~~l~~lv~~in~~~g~~~V~f~g~v~~~el~aly~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~a 407 (496)
T 3t5t_A 328 VPANADYVHRVETAVAEANAELGSDTVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETC 407 (496)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCHHHHHHHHHHCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTB
T ss_pred chHHHHHHHHHHHHHHHhccccCCcCEEEeCCCCHHHHHHHHHhccEEEECcccccCChhHHHHHHhCCCCCCEEEeCCC
Confidence 1334444443332 2211 3444433466667799999999999999999999999999996 899999999
Q ss_pred ccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHH
Q 008154 490 GLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEW 567 (576)
Q Consensus 490 g~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~ 567 (576)
|..+.+. .+|++++|.|++++|++|.+++.. .++++++++++. ....+++...++.+++.+..
T Consensus 408 Ga~~~l~------------~~allVnP~D~~~lA~AI~~aL~m---~~~er~~r~~~~~~~V~~~d~~~W~~~fl~~L~~ 472 (496)
T 3t5t_A 408 GAAEVLG------------EYCRSVNPFDLVEQAEAISAALAA---GPRQRAEAAARRRDAARPWTLEAWVQAQLDGLAA 472 (496)
T ss_dssp TTHHHHG------------GGSEEECTTBHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHTTCBHHHHHHHHHHHHHH
T ss_pred CCHHHhC------------CCEEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHhh
Confidence 8888874 479999999999999999999873 445555555555 34679999999999888876
Q ss_pred h
Q 008154 568 A 568 (576)
Q Consensus 568 ~ 568 (576)
+
T Consensus 473 ~ 473 (496)
T 3t5t_A 473 D 473 (496)
T ss_dssp H
T ss_pred c
Confidence 5
No 29
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=99.90 E-value=9.8e-23 Score=185.29 Aligned_cols=159 Identities=19% Similarity=0.222 Sum_probs=124.6
Q ss_pred CCEEEEecccccccCHHHHHHHHHhhhc-CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccC-ChhHHHHHHhcCCE
Q 008154 382 CPLIGFIGRLDYQKGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRITAGCDI 459 (576)
Q Consensus 382 ~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~-~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~Dv 459 (576)
+++|+|+||+.+.||++.+++|+..+.+ ++++|+|+|+|+. .+...+ ..+....++. + ++ +.+.+..+|+.||+
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~-~~~~~~-~~~~~~~~v~-~-g~~~~~~~~~~~~~adv 77 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGKGPD-EKKIKL-LAQKLGVKAE-F-GFVNSNELLEILKTCTL 77 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCTTGGGEEEEEECCSTT-HHHHHH-HHHHHTCEEE-C-CCCCHHHHHHHHTTCSE
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhccCCCeEEEEEeCCcc-HHHHHH-HHHHcCCeEE-E-eecCHHHHHHHHHhCCE
Confidence 4789999999999999999999999865 5899999999852 333333 3334433443 3 44 55667789999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCC-ceEE-eCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCH
Q 008154 460 LLMPSRFEPCGLNQLYAMRYGT-IPVV-HATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHK 537 (576)
Q Consensus 460 ~v~ps~~E~~g~s~lEAma~G~-pvIa-t~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~ 537 (576)
+|+||.+|++|++++|||++|+ |||+ ++.|+..+++.+ + +.+++++|+++++++|.+++. |+
T Consensus 78 ~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~----------~--~~~~~~~~~~~l~~~i~~l~~----~~ 141 (166)
T 3qhp_A 78 YVHAANVESEAIACLEAISVGIVPVIANSPLSATRQFALD----------E--RSLFEPNNAKDLSAKIDWWLE----NK 141 (166)
T ss_dssp EEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSS----------G--GGEECTTCHHHHHHHHHHHHH----CH
T ss_pred EEECCcccCccHHHHHHHhcCCCcEEeeCCCCchhhhccC----------C--ceEEcCCCHHHHHHHHHHHHh----CH
Confidence 9999999999999999999998 9999 568888898876 3 337788999999999999986 88
Q ss_pred HHHHHHHHHH--HhhhCCHHHHHHH
Q 008154 538 SSWEGLMRRG--MEKDYTWENAAIQ 560 (576)
Q Consensus 538 ~~~~~~~~~a--~~~~fs~~~~~~~ 560 (576)
+.+.++++++ ..++|||++++++
T Consensus 142 ~~~~~~~~~~~~~~~~~s~~~~~~~ 166 (166)
T 3qhp_A 142 LERERMQNEYAKSALNYTLENSVIQ 166 (166)
T ss_dssp HHHHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHHHHHHCChhhhhcC
Confidence 8888888887 3578999998764
No 30
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.86 E-value=1.8e-20 Score=193.80 Aligned_cols=219 Identities=11% Similarity=-0.007 Sum_probs=147.8
Q ss_pred HHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCC-CCCCCCCCCCccccccCCcCCcccchHhHHHHH
Q 008154 293 AIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGI-DITEWNPSSDEHIASHYSIDDLSGKVQCKIALQ 371 (576)
Q Consensus 293 a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGv-d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 371 (576)
..+.+|.++++|+..++.+.. .+.+..++.+++|++ |...+.+. +..++
T Consensus 143 ~~~~~~~~~~~s~~~~~~l~~----------~g~~~~ki~vi~n~~~d~~~~~~~--------------------~~~~~ 192 (376)
T 1v4v_A 143 TDVLTDLDFAPTPLAKANLLK----------EGKREEGILVTGQTGVDAVLLAAK--------------------LGRLP 192 (376)
T ss_dssp HHHHCSEEEESSHHHHHHHHT----------TTCCGGGEEECCCHHHHHHHHHHH--------------------HCCCC
T ss_pred HHHHhceeeCCCHHHHHHHHH----------cCCCcceEEEECCchHHHHhhhhh--------------------hhHHH
Confidence 446789999999987766532 133456789999975 32111000 00000
Q ss_pred HHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEE-eCCChhhHHHHHHHHHHhcCceEEEccCChh
Q 008154 372 KELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVML-GSGDPQFESWMRDTEATYKDKYRGWVGFNVP 448 (576)
Q Consensus 372 ~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~-G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (576)
+.+ + ++..+++++||+...||++.+++|++.+.+ ++++++++ |+++ ...+..+..... ..++.+.......
T Consensus 193 ~~~--~--~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~lv~~~g~~~-~~~~~l~~~~~~-~~~v~~~g~~g~~ 266 (376)
T 1v4v_A 193 EGL--P--EGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNP-VVREAVFPVLKG-VRNFVLLDPLEYG 266 (376)
T ss_dssp TTC--C--SSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCH-HHHHHHHHHHTT-CTTEEEECCCCHH
T ss_pred Hhc--C--CCCEEEEEeCcccchHHHHHHHHHHHHHHhhCCCeEEEEECCCCH-HHHHHHHHHhcc-CCCEEEECCCCHH
Confidence 111 1 245677889999888899999999999865 57888886 7653 222222222211 2355443222223
Q ss_pred HHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEe-CccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHH
Q 008154 449 ISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH-ATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALR 527 (576)
Q Consensus 449 ~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat-~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~ 527 (576)
....+|+.||++|.|| | |+ ++|||++|+|+|++ +.|+..+.+.+ ++|++++ .|+++++++|.
T Consensus 267 ~~~~~~~~ad~~v~~S--~--g~-~lEA~a~G~PvI~~~~~~~~~~~~~~-----------g~g~lv~-~d~~~la~~i~ 329 (376)
T 1v4v_A 267 SMAALMRASLLLVTDS--G--GL-QEEGAALGVPVVVLRNVTERPEGLKA-----------GILKLAG-TDPEGVYRVVK 329 (376)
T ss_dssp HHHHHHHTEEEEEESC--H--HH-HHHHHHTTCCEEECSSSCSCHHHHHH-----------TSEEECC-SCHHHHHHHHH
T ss_pred HHHHHHHhCcEEEECC--c--CH-HHHHHHcCCCEEeccCCCcchhhhcC-----------CceEECC-CCHHHHHHHHH
Confidence 4568999999999998 2 44 88999999999997 57888887765 5899885 49999999999
Q ss_pred HHHHHhhhCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhh
Q 008154 528 FAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASI 570 (576)
Q Consensus 528 ~~l~~~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y~~~~~ 570 (576)
+++. |++.+.+|+++ .+.|.+...++++.+.+.+.+.
T Consensus 330 ~ll~----d~~~~~~~~~~--~~~~~~~~~~~~i~~~i~~~~~ 366 (376)
T 1v4v_A 330 GLLE----NPEELSRMRKA--KNPYGDGKAGLMVARGVAWRLG 366 (376)
T ss_dssp HHHT----CHHHHHHHHHS--CCSSCCSCHHHHHHHHHHHHTT
T ss_pred HHHh----ChHhhhhhccc--CCCCCCChHHHHHHHHHHHHhc
Confidence 8875 88888888763 3566666777777777776665
No 31
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=99.85 E-value=3e-20 Score=170.91 Aligned_cols=138 Identities=19% Similarity=0.185 Sum_probs=117.3
Q ss_pred CCCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHH---HHhcCceEEEccCChhHHHHHHhc
Q 008154 380 PDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTE---ATYKDKYRGWVGFNVPISHRITAG 456 (576)
Q Consensus 380 ~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ll~~ 456 (576)
.+..+|+|+||+.+.||++.+++|+..+ ++++|+|+|.++.. +...+.+. ..+..++.+....+.+.+..+++.
T Consensus 21 ~~~~~i~~~G~~~~~Kg~~~li~a~~~l--~~~~l~i~G~~~~~-~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~ 97 (177)
T 2f9f_A 21 CYGDFWLSVNRIYPEKRIELQLEVFKKL--QDEKLYIVGWFSKG-DHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSR 97 (177)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHC--TTSCEEEEBCCCTT-STHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHH
T ss_pred CCCCEEEEEeccccccCHHHHHHHHHhC--CCcEEEEEecCccH-HHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHh
Confidence 5678999999999999999999999998 68999999998632 23333333 234456665544466667799999
Q ss_pred CCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHH
Q 008154 457 CDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 457 ~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
||++|+||..|++|++++|||++|+|||+++.|+..|.+.+ +.+|+++ +.|+++++++|.+++.
T Consensus 98 adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~----------~~~g~~~-~~d~~~l~~~i~~l~~ 161 (177)
T 2f9f_A 98 CKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVIN----------EKTGYLV-NADVNEIIDAMKKVSK 161 (177)
T ss_dssp CSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCB----------TTTEEEE-CSCHHHHHHHHHHHHH
T ss_pred CCEEEeCCCcCCCChHHHHHHHcCCcEEEeCCCCHHHHhcC----------CCccEEe-CCCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999988 8899999 8899999999999986
No 32
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=99.83 E-value=2.5e-19 Score=184.96 Aligned_cols=197 Identities=13% Similarity=0.034 Sum_probs=140.6
Q ss_pred hHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCcccchHhHH
Q 008154 289 VLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKI 368 (576)
Q Consensus 289 ~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 368 (576)
+.+..++.+|.++++|+..++.+.. ++.+ ++.+++|+. |.+....
T Consensus 146 ~~~~~~~~~d~ii~~S~~~~~~l~~----------~g~~--ki~vi~n~~----f~~~~~~------------------- 190 (374)
T 2xci_A 146 IEKILSKKFDLIIMRTQEDVEKFKT----------FGAK--RVFSCGNLK----FICQKGK------------------- 190 (374)
T ss_dssp HHHHHHTTCSEEEESCHHHHHHHHT----------TTCC--SEEECCCGG----GCCCCCS-------------------
T ss_pred HHHHHHHhCCEEEECCHHHHHHHHH----------cCCC--eEEEcCCCc----cCCCcCh-------------------
Confidence 3455678899999999998877642 1222 789999983 2111100
Q ss_pred HHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCc--------
Q 008154 369 ALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDK-------- 438 (576)
Q Consensus 369 ~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~-------- 438 (576)
...+ ..+++++.|+ ..||.+.+++|++++.+ ++++|+|+|+++...++..+.+.+ ....
T Consensus 191 ----~~~l----~~~vi~~~~~--~~k~~~~ll~A~~~l~~~~p~~~lvivG~g~~~~~~l~~~~~~-~gl~~~~~~~~~ 259 (374)
T 2xci_A 191 ----GIKL----KGEFIVAGSI--HTGEVEIILKAFKEIKKTYSSLKLILVPRHIENAKIFEKKARD-FGFKTSFFENLE 259 (374)
T ss_dssp ----CCCC----SSCEEEEEEE--CGGGHHHHHHHHHHHHTTCTTCEEEEEESSGGGHHHHHHHHHH-TTCCEEETTCCC
T ss_pred ----hhhh----cCCEEEEEeC--CCchHHHHHHHHHHHHhhCCCcEEEEECCCHHHHHHHHHHHHH-CCCceEEecCCC
Confidence 0001 1256666665 46899999999999975 589999999985332345444443 2211
Q ss_pred -eEEEccCChhHHHHHHhcCCEEEeCCCC-CCCcHHHHHHHHcCCceEEe-CccccccccccccccccCCCCC-cceeEe
Q 008154 439 -YRGWVGFNVPISHRITAGCDILLMPSRF-EPCGLNQLYAMRYGTIPVVH-ATGGLRDTVENFNPFAREGSGE-GTGWSF 514 (576)
Q Consensus 439 -~~~~~~~~~~~~~~ll~~~Dv~v~ps~~-E~~g~s~lEAma~G~pvIat-~~gg~~e~i~~~~~~~~~~~~~-~~G~~~ 514 (576)
.+.+.++..+ +..+|+.||+++.||.+ |.+|.+++||||||+|||++ +.++++|.+.+ . .+|+++
T Consensus 260 ~~v~~~~~~~d-l~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~----------~~~~G~l~ 328 (374)
T 2xci_A 260 GDVILVDRFGI-LKELYPVGKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEF----------LEKEGAGF 328 (374)
T ss_dssp SSEEECCSSSC-HHHHGGGEEEEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHH----------HHHTTCEE
T ss_pred CcEEEECCHHH-HHHHHHhCCEEEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHH----------HHHCCCEE
Confidence 1334454344 45899999998888765 67899999999999999985 77999998865 2 578888
Q ss_pred CCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH
Q 008154 515 LPLSEESMLTALRFAIRTYREHKSSWEGLMRRG 547 (576)
Q Consensus 515 ~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a 547 (576)
.++|+++++++|.+++. | +.+.+|++++
T Consensus 329 ~~~d~~~La~ai~~ll~----d-~~r~~mg~~a 356 (374)
T 2xci_A 329 EVKNETELVTKLTELLS----V-KKEIKVEEKS 356 (374)
T ss_dssp ECCSHHHHHHHHHHHHH----S-CCCCCHHHHH
T ss_pred EeCCHHHHHHHHHHHHh----H-HHHHHHHHHH
Confidence 88999999999999986 6 6677777766
No 33
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.73 E-value=2e-16 Score=165.25 Aligned_cols=160 Identities=13% Similarity=0.084 Sum_probs=119.4
Q ss_pred CCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEE
Q 008154 381 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDIL 460 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~ 460 (576)
+..++++.|++. .|+.+.+.++++.+.+.++++++++.+.+..+.. + ....++. +.++. + ...+++.||++
T Consensus 242 ~~~vlv~~G~~~-~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~l-~----~~~~~v~-~~~~~-~-~~~~l~~ad~~ 312 (412)
T 3otg_A 242 RPLVYLTLGTSS-GGTVEVLRAAIDGLAGLDADVLVASGPSLDVSGL-G----EVPANVR-LESWV-P-QAALLPHVDLV 312 (412)
T ss_dssp SCEEEEECTTTT-CSCHHHHHHHHHHHHTSSSEEEEECCSSCCCTTC-C----CCCTTEE-EESCC-C-HHHHGGGCSEE
T ss_pred CCEEEEEcCCCC-cCcHHHHHHHHHHHHcCCCEEEEEECCCCChhhh-c----cCCCcEE-EeCCC-C-HHHHHhcCcEE
Confidence 456778889986 7888888888888877678888877654211111 0 1233544 44554 2 44799999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEeCcc----ccccccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHHHHHhh
Q 008154 461 LMPSRFEPCGLNQLYAMRYGTIPVVHATG----GLRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAIRTYR 534 (576)
Q Consensus 461 v~ps~~E~~g~s~lEAma~G~pvIat~~g----g~~e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~l~~~~ 534 (576)
|.++ .+.+++|||++|+|+|++..+ +..+.+.+ +++|+.++++ |+++++++|.+++.
T Consensus 313 v~~~----g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~----------~g~g~~~~~~~~~~~~l~~ai~~ll~--- 375 (412)
T 3otg_A 313 VHHG----GSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQ----------AGAGDHLLPDNISPDSVSGAAKRLLA--- 375 (412)
T ss_dssp EESC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH----------HTSEEECCGGGCCHHHHHHHHHHHHH---
T ss_pred EECC----chHHHHHHHHhCCCEEecCCchhHHHHHHHHHH----------cCCEEecCcccCCHHHHHHHHHHHHh---
Confidence 9775 348999999999999997654 36677766 6889999876 89999999999886
Q ss_pred hCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHH
Q 008154 535 EHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEW 567 (576)
Q Consensus 535 ~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~ 567 (576)
|++.+.++++.+ +...++++++++.+.+++.+
T Consensus 376 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 409 (412)
T 3otg_A 376 -EESYRAGARAVAAEIAAMPGPDEVVRLLPGFASR 409 (412)
T ss_dssp -CHHHHHHHHHHHHHHHHSCCHHHHHTTHHHHHC-
T ss_pred -CHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcc
Confidence 788888887766 55678999999999888754
No 34
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=99.71 E-value=1.8e-15 Score=152.82 Aligned_cols=244 Identities=11% Similarity=-0.007 Sum_probs=157.9
Q ss_pred CccEEEeCCCcc--c-hHHHHHHhhccCCCCCCCCcEEEEeecCCCCCCCChhhhhhcCCChhhhccccccccccccccc
Q 008154 204 EKCIFLVNDWHA--G-LVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHA 280 (576)
Q Consensus 204 ~pDVvH~~~~~~--~-~~~~~l~~~~~~~~~~~~~~~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (576)
++|+|+++.... . +...++..... .++|+|+.+|+.. |. .. ...
T Consensus 74 ~~DvIi~q~P~~~~~~~~~~~~~~lk~-----~~~k~i~~ihDl~-----pl-~~-----~~~----------------- 120 (339)
T 3rhz_A 74 HGDVVIFQTPTWNTTEFDEKLMNKLKL-----YDIKIVLFIHDVV-----PL-MF-----SGN----------------- 120 (339)
T ss_dssp TTCEEEEEECCSSCHHHHHHHHHHHTT-----SSCEEEEEESCCH-----HH-HC-----GGG-----------------
T ss_pred CCCEEEEeCCCcchhhHHHHHHHHHHh-----cCCEEEEEecccH-----Hh-hC-----ccc-----------------
Confidence 689999876432 2 22233333211 3799999999862 11 10 000
Q ss_pred CCcCccchhHHHHHHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCCCCCCCCccccccCCcCCc
Q 008154 281 LDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDL 360 (576)
Q Consensus 281 ~~~~~~~~~~~~a~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~~~~~~~~~l~~~~~~~~~ 360 (576)
......++..++.||.|+++|+.+.+.+.+ .+.+..++.++++. +... +.+.
T Consensus 121 ---~~~~~~E~~~y~~aD~Ii~~S~~~~~~l~~----------~G~~~~ki~~~~~~-~~~~--~~~~------------ 172 (339)
T 3rhz_A 121 ---FYLMDRTIAYYNKADVVVAPSQKMIDKLRD----------FGMNVSKTVVQGMW-DHPT--QAPM------------ 172 (339)
T ss_dssp ---GGGHHHHHHHHTTCSEEEESCHHHHHHHHH----------TTCCCSEEEECCSC-CCCC--CCCC------------
T ss_pred ---hhhHHHHHHHHHHCCEEEECCHHHHHHHHH----------cCCCcCceeecCCC-CccC--cccc------------
Confidence 001236788899999999999999877642 13333555443332 2110 0000
Q ss_pred ccchHhHHHHHHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceE
Q 008154 361 SGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYR 440 (576)
Q Consensus 361 ~~~~~~~~~~~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~ 440 (576)
..+ .+.++|+|+|++.+...+ ..+ .++++|+|+|+|+.. ... ++.
T Consensus 173 --------------~~~--~~~~~i~yaG~l~k~~~L-------~~l-~~~~~f~ivG~G~~~----------~l~-nV~ 217 (339)
T 3rhz_A 173 --------------FPA--GLKREIHFPGNPERFSFV-------KEW-KYDIPLKVYTWQNVE----------LPQ-NVH 217 (339)
T ss_dssp --------------CCC--EEEEEEEECSCTTTCGGG-------GGC-CCSSCEEEEESCCCC----------CCT-TEE
T ss_pred --------------ccc--CCCcEEEEeCCcchhhHH-------HhC-CCCCeEEEEeCCccc----------CcC-CEE
Confidence 011 245789999999953222 222 368999999999642 133 665
Q ss_pred EEccCChhHHHHHHhcCCEEEeCCC-------CCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeE
Q 008154 441 GWVGFNVPISHRITAGCDILLMPSR-------FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWS 513 (576)
Q Consensus 441 ~~~~~~~~~~~~ll~~~Dv~v~ps~-------~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~ 513 (576)
+....+.+.+..+++.+|+.+.+.. ...+|.++.||||+|+|||+++.++..+++.+ +.+|+.
T Consensus 218 f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~~~~~~v~~----------~~~G~~ 287 (339)
T 3rhz_A 218 KINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGIANQELIEN----------NGLGWI 287 (339)
T ss_dssp EEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTCTTTHHHHH----------HTCEEE
T ss_pred EeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEccChhHHHHHHh----------CCeEEE
Confidence 5544577778789988888887621 12568999999999999999999999999998 889999
Q ss_pred eCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHH
Q 008154 514 FLPLSEESMLTALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQY 561 (576)
Q Consensus 514 ~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y 561 (576)
++ +.++++++|..+ .++.+.+|++++ .+++++++.+.++.
T Consensus 288 ~~--~~~e~~~~i~~l------~~~~~~~m~~na~~~a~~~~~~~f~k~~ 329 (339)
T 3rhz_A 288 VK--DVEEAIMKVKNV------NEDEYIELVKNVRSFNPILRKGFFTRRL 329 (339)
T ss_dssp ES--SHHHHHHHHHHC------CHHHHHHHHHHHHHHTHHHHTTHHHHHH
T ss_pred eC--CHHHHHHHHHHh------CHHHHHHHHHHHHHHHHHhhccHHHHHH
Confidence 86 577777777754 456678888887 34455555555444
No 35
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.69 E-value=7.4e-16 Score=160.27 Aligned_cols=218 Identities=14% Similarity=0.064 Sum_probs=141.5
Q ss_pred HhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCC-CCCCCCCCCCCccccccCCcCCcccchHhHHHHHHH
Q 008154 295 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNG-IDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 373 (576)
Q Consensus 295 ~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nG-vd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 373 (576)
+.+|.+++.|+..++.+.+ .+.+++++.++.|. +|...+.+.... +...++.
T Consensus 168 ~~a~~~~~~se~~~~~l~~----------~Gi~~~~i~vvGn~~~D~~~~~~~~~~-----------------~~~~~~~ 220 (403)
T 3ot5_A 168 VMADIHFSPTKQAKENLLA----------EGKDPATIFVTGNTAIDALKTTVQKDY-----------------HHPILEN 220 (403)
T ss_dssp HHCSEEEESSHHHHHHHHH----------TTCCGGGEEECCCHHHHHHHHHSCTTC-----------------CCHHHHS
T ss_pred HhcCEEECCCHHHHHHHHH----------cCCCcccEEEeCCchHHHHHhhhhhhc-----------------chHHHHh
Confidence 5689999999987766532 24456789999984 553222111100 0112222
Q ss_pred cCCCCCCCCCEEEEeccccc-ccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHH
Q 008154 374 LGLPIRPDCPLIGFIGRLDY-QKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPIS 450 (576)
Q Consensus 374 ~~i~~~~~~~~i~~~Gr~~~-~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (576)
+ + ++..++++.+|.+. .|+++.+++|+.++.+ +++++++.+...+...+..+... ....++.+.........
T Consensus 221 l--~--~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~~~~~~l~~~~-~~~~~v~l~~~l~~~~~ 295 (403)
T 3ot5_A 221 L--G--DNRLILMTAHRRENLGEPMQGMFEAVREIVESREDTELVYPMHLNPAVREKAMAIL-GGHERIHLIEPLDAIDF 295 (403)
T ss_dssp C--T--TCEEEEECCCCHHHHTTHHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHH-TTCTTEEEECCCCHHHH
T ss_pred c--c--CCCEEEEEeCcccccCcHHHHHHHHHHHHHHhCCCceEEEecCCCHHHHHHHHHHh-CCCCCEEEeCCCCHHHH
Confidence 3 2 34566777888653 4789999999999865 68898887432232233222211 11235544443343456
Q ss_pred HHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEe-CccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHH
Q 008154 451 HRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH-ATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFA 529 (576)
Q Consensus 451 ~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat-~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~ 529 (576)
..+++.||++|.+| |...+||+++|+|+|++ +.++..|.+.. ++|+++++ |++++++++.++
T Consensus 296 ~~l~~~ad~vv~~S-----Gg~~~EA~a~g~PvV~~~~~~~~~e~v~~-----------g~~~lv~~-d~~~l~~ai~~l 358 (403)
T 3ot5_A 296 HNFLRKSYLVFTDS-----GGVQEEAPGMGVPVLVLRDTTERPEGIEA-----------GTLKLIGT-NKENLIKEALDL 358 (403)
T ss_dssp HHHHHHEEEEEECC-----HHHHHHGGGTTCCEEECCSSCSCHHHHHH-----------TSEEECCS-CHHHHHHHHHHH
T ss_pred HHHHHhcCEEEECC-----ccHHHHHHHhCCCEEEecCCCcchhheeC-----------CcEEEcCC-CHHHHHHHHHHH
Confidence 68999999999887 44559999999999998 67888888765 48888865 899999999988
Q ss_pred HHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHH
Q 008154 530 IRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVF 565 (576)
Q Consensus 530 l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y 565 (576)
+. |++.+.+|++++ +....+++++++.+.+.+
T Consensus 359 l~----~~~~~~~m~~~~~~~g~~~aa~rI~~~l~~~l 392 (403)
T 3ot5_A 359 LD----NKESHDKMAQAANPYGDGFAANRILAAIKSHF 392 (403)
T ss_dssp HH----CHHHHHHHHHSCCTTCCSCHHHHHHHHHHHHH
T ss_pred Hc----CHHHHHHHHhhcCcccCCcHHHHHHHHHHHHh
Confidence 75 888888887643 223445555555555443
No 36
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.68 E-value=8.8e-16 Score=159.46 Aligned_cols=222 Identities=11% Similarity=0.017 Sum_probs=141.1
Q ss_pred HHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCC-CCCCCCCCCCCccccccCCcCCcccchHhHHHHHH
Q 008154 294 IVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNG-IDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQK 372 (576)
Q Consensus 294 ~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nG-vd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 372 (576)
.+.+|.+++.|+..++.+.+ .+.++.++.++.|. +|...+.+.... .....+..+++
T Consensus 164 ~~~a~~~~~~se~~~~~l~~----------~G~~~~ki~vvGn~~~d~~~~~~~~~~------------~~~~~~~~~r~ 221 (396)
T 3dzc_A 164 AALTQYHFAPTDTSRANLLQ----------ENYNAENIFVTGNTVIDALLAVREKIH------------TDMDLQATLES 221 (396)
T ss_dssp HHTCSEEEESSHHHHHHHHH----------TTCCGGGEEECCCHHHHHHHHHHHHHH------------HCHHHHHHHHH
T ss_pred HHhcCEEECCCHHHHHHHHH----------cCCCcCcEEEECCcHHHHHHHhhhhcc------------cchhhHHHHHH
Confidence 46789999999987766531 24456789999985 442111100000 00000256677
Q ss_pred HcC-CCCCCCCCEEEEecccc-cccCHHHHHHHHHhhhc--CCcEEEEE-eCCChhhHHHHHHHHHHhcCceEEEccCCh
Q 008154 373 ELG-LPIRPDCPLIGFIGRLD-YQKGIDLIRLAAPEILA--DDIQFVML-GSGDPQFESWMRDTEATYKDKYRGWVGFNV 447 (576)
Q Consensus 373 ~~~-i~~~~~~~~i~~~Gr~~-~~Kg~~~ll~a~~~L~~--~~~~lii~-G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (576)
.+| ++. ++..++++.+|.+ ..|+++.+++|++.+.+ +++++++. |.+ +...+..+... ....++.+......
T Consensus 222 ~lg~l~~-~~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~~~~~~~v~~~g~~-~~~~~~l~~~~-~~~~~v~~~~~lg~ 298 (396)
T 3dzc_A 222 QFPMLDA-SKKLILVTGHRRESFGGGFERICQALITTAEQHPECQILYPVHLN-PNVREPVNKLL-KGVSNIVLIEPQQY 298 (396)
T ss_dssp TCTTCCT-TSEEEEEECSCBCCCTTHHHHHHHHHHHHHHHCTTEEEEEECCBC-HHHHHHHHHHT-TTCTTEEEECCCCH
T ss_pred HhCccCC-CCCEEEEEECCcccchhHHHHHHHHHHHHHHhCCCceEEEEeCCC-hHHHHHHHHHH-cCCCCEEEeCCCCH
Confidence 788 442 2344556666754 45889999999999875 68998885 554 33333222221 11235544433332
Q ss_pred hHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEe-CccccccccccccccccCCCCCcceeEeCCCCHHHHHHHH
Q 008154 448 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH-ATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTAL 526 (576)
Q Consensus 448 ~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat-~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i 526 (576)
.....+|+.||++|.+| + |++ +|||++|+|+|++ +.++.+|.+.. | ++++++. |++++++++
T Consensus 299 ~~~~~l~~~ad~vv~~S---G-g~~-~EA~a~G~PvV~~~~~~~~~e~v~~----------G-~~~lv~~-d~~~l~~ai 361 (396)
T 3dzc_A 299 LPFVYLMDRAHIILTDS---G-GIQ-EEAPSLGKPVLVMRETTERPEAVAA----------G-TVKLVGT-NQQQICDAL 361 (396)
T ss_dssp HHHHHHHHHCSEEEESC---S-GGG-TTGGGGTCCEEECCSSCSCHHHHHH----------T-SEEECTT-CHHHHHHHH
T ss_pred HHHHHHHHhcCEEEECC---c-cHH-HHHHHcCCCEEEccCCCcchHHHHc----------C-ceEEcCC-CHHHHHHHH
Confidence 33558999999999998 3 444 8999999999998 78888888876 4 5677654 899999999
Q ss_pred HHHHHHhhhCHHHHHHHHHHHHhhhCCHHHHHHHHHH
Q 008154 527 RFAIRTYREHKSSWEGLMRRGMEKDYTWENAAIQYEQ 563 (576)
Q Consensus 527 ~~~l~~~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~ 563 (576)
.+++. |++.+.+|++++ ..|.....+++..+
T Consensus 362 ~~ll~----d~~~~~~m~~~~--~~~~~~~aa~ri~~ 392 (396)
T 3dzc_A 362 SLLLT----DPQAYQAMSQAH--NPYGDGKACQRIAD 392 (396)
T ss_dssp HHHHH----CHHHHHHHHTSC--CTTCCSCHHHHHHH
T ss_pred HHHHc----CHHHHHHHhhcc--CCCcCChHHHHHHH
Confidence 88875 888888887653 33444444444443
No 37
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.63 E-value=4.8e-14 Score=148.15 Aligned_cols=160 Identities=10% Similarity=0.018 Sum_probs=110.3
Q ss_pred CCCEEEEecccccccCHHHHHHHHHhhhc-CCcEE-EEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCC
Q 008154 381 DCPLIGFIGRLDYQKGIDLIRLAAPEILA-DDIQF-VMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCD 458 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~-~~~~l-ii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~D 458 (576)
+..++++.|++. .++.+.+.++++.+.+ +++++ +++|+++.. +.. +....++. +.++.+.. .+|+.||
T Consensus 232 ~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~-~~l-----~~~~~~v~-~~~~~~~~--~~l~~ad 301 (430)
T 2iyf_A 232 EKVVLVSLGSAF-TKQPAFYRECVRAFGNLPGWHLVLQIGRKVTP-AEL-----GELPDNVE-VHDWVPQL--AILRQAD 301 (430)
T ss_dssp SEEEEEECTTTC-C-CHHHHHHHHHHHTTCTTEEEEEECC---CG-GGG-----CSCCTTEE-EESSCCHH--HHHTTCS
T ss_pred CCeEEEEcCCCC-CCcHHHHHHHHHHHhcCCCeEEEEEeCCCCCh-HHh-----ccCCCCeE-EEecCCHH--HHhhccC
Confidence 456788999998 6666666666666655 47888 467877421 111 11234554 45554443 6899999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEeCccc----cccccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHHHHH
Q 008154 459 ILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG----LRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAIRT 532 (576)
Q Consensus 459 v~v~ps~~E~~g~s~lEAma~G~pvIat~~gg----~~e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~l~~ 532 (576)
++|..+ -+.+++|||++|+|+|++..++ +.+.+.+ .++|+.++++ |+++++++|.+++.
T Consensus 302 ~~v~~~----G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~----------~g~g~~~~~~~~~~~~l~~~i~~ll~- 366 (430)
T 2iyf_A 302 LFVTHA----GAGGSQEGLATATPMIAVPQAVDQFGNADMLQG----------LGVARKLATEEATADLLRETALALVD- 366 (430)
T ss_dssp EEEECC----CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH----------TTSEEECCCC-CCHHHHHHHHHHHHH-
T ss_pred EEEECC----CccHHHHHHHhCCCEEECCCccchHHHHHHHHH----------cCCEEEcCCCCCCHHHHHHHHHHHHc-
Confidence 999864 2378999999999999997654 3555655 5789998876 78999999999885
Q ss_pred hhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHh
Q 008154 533 YREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEWA 568 (576)
Q Consensus 533 ~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~~ 568 (576)
|++.+.++++.+ +....+++++++.+.+.+.+.
T Consensus 367 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 401 (430)
T 2iyf_A 367 ---DPEVARRLRRIQAEMAQEGGTRRAADLIEAELPAR 401 (430)
T ss_dssp ---CHHHHHHHHHHHHHHHHHCHHHHHHHHHHTTSCC-
T ss_pred ---CHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhhcc
Confidence 777777776655 445689999999888877544
No 38
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.59 E-value=1e-12 Score=134.86 Aligned_cols=161 Identities=12% Similarity=0.004 Sum_probs=106.1
Q ss_pred CEEEEecccccccCHHHHHHHHHhhhc-CCcEEEE-EeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEE
Q 008154 383 PLIGFIGRLDYQKGIDLIRLAAPEILA-DDIQFVM-LGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDIL 460 (576)
Q Consensus 383 ~~i~~~Gr~~~~Kg~~~ll~a~~~L~~-~~~~lii-~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~ 460 (576)
.++++.|+....+.-+.+.++++.+.. .++++++ +|.++ .+...+... ....++. ..+|.++ +..+|+.||++
T Consensus 182 ~ilv~gGs~g~~~~~~~~~~al~~l~~~~~~~vi~~~G~~~--~~~~~~~~~-~~~~~~~-v~~f~~d-m~~~l~~aDlv 256 (365)
T 3s2u_A 182 NLLVLGGSLGAEPLNKLLPEALAQVPLEIRPAIRHQAGRQH--AEITAERYR-TVAVEAD-VAPFISD-MAAAYAWADLV 256 (365)
T ss_dssp EEEECCTTTTCSHHHHHHHHHHHTSCTTTCCEEEEECCTTT--HHHHHHHHH-HTTCCCE-EESCCSC-HHHHHHHCSEE
T ss_pred EEEEECCcCCccccchhhHHHHHhcccccceEEEEecCccc--cccccceec-ccccccc-cccchhh-hhhhhccceEE
Confidence 455666788888888889999988865 3555554 44443 344444443 3333433 3456444 44799999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEeCccccc--------cccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHHH
Q 008154 461 LMPSRFEPCGLNQLYAMRYGTIPVVHATGGLR--------DTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAI 530 (576)
Q Consensus 461 v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~--------e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~l 530 (576)
|.-+ -++|+.|+|++|+|+|....+... +.+.+ .+.|++++.. +++.++++|.+++
T Consensus 257 I~ra----G~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~----------~G~a~~l~~~~~~~~~L~~~i~~ll 322 (365)
T 3s2u_A 257 ICRA----GALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVR----------SGAGRLLPQKSTGAAELAAQLSEVL 322 (365)
T ss_dssp EECC----CHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHT----------TTSEEECCTTTCCHHHHHHHHHHHH
T ss_pred EecC----CcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHH----------CCCEEEeecCCCCHHHHHHHHHHHH
Confidence 9643 478999999999999987654321 23444 4678888654 5888999999887
Q ss_pred HHhhhCHHHHHHHHHHHH--hhhCCHHHHHHHHHHHHH
Q 008154 531 RTYREHKSSWEGLMRRGM--EKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 531 ~~~~~~~~~~~~~~~~a~--~~~fs~~~~~~~y~~~y~ 566 (576)
. |++.+.+|++++. ......+++++..+++.+
T Consensus 323 ~----d~~~~~~m~~~a~~~~~~~aa~~ia~~i~~lar 356 (365)
T 3s2u_A 323 M----HPETLRSMADQARSLAKPEATRTVVDACLEVAR 356 (365)
T ss_dssp H----CTHHHHHHHHHHHHTCCTTHHHHHHHHHHHHC-
T ss_pred C----CHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHc
Confidence 6 8899999988873 334556666666665543
No 39
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.58 E-value=7.3e-15 Score=152.82 Aligned_cols=152 Identities=15% Similarity=0.024 Sum_probs=97.5
Q ss_pred CCCEEEEeccccccc----------CHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHH
Q 008154 381 DCPLIGFIGRLDYQK----------GIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPIS 450 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~K----------g~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (576)
...++++.|++...| .+..+++++..+ ++++++++.+.. .+ .+. ....++. +.++.+ .
T Consensus 227 ~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~---~~~~v~~~~~~~--~~---~l~-~~~~~v~-~~~~~~--~ 294 (398)
T 4fzr_A 227 QPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL---GFEVVVAVSDKL--AQ---TLQ-PLPEGVL-AAGQFP--L 294 (398)
T ss_dssp SCEEECC----------------CCSHHHHHHHGGGG---TCEEEECCCC--------------CCTTEE-EESCCC--H
T ss_pred CCEEEEEccCcccccccccccchHHHHHHHHHHHHhC---CCEEEEEeCCcc--hh---hhc-cCCCcEE-EeCcCC--H
Confidence 456778889997544 466666666655 789999887742 11 111 2344554 445542 3
Q ss_pred HHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeC----ccccccccccccccccCCCCCcceeEeCCC--CHHHHHH
Q 008154 451 HRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA----TGGLRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLT 524 (576)
Q Consensus 451 ~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~----~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~ 524 (576)
..++..||++|.. +-+.+++|||++|+|+|+.. ..++.+.+.+ .++|+.++++ +++++++
T Consensus 295 ~~ll~~ad~~v~~----gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~----------~g~g~~~~~~~~~~~~l~~ 360 (398)
T 4fzr_A 295 SAIMPACDVVVHH----GGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHA----------AGAGVEVPWEQAGVESVLA 360 (398)
T ss_dssp HHHGGGCSEEEEC----CCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHH----------TTSEEECC-------CHHH
T ss_pred HHHHhhCCEEEec----CCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHH----------cCCEEecCcccCCHHHHHH
Confidence 4689999999953 45789999999999999954 4466677766 6889998776 6788888
Q ss_pred HHHHHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHH
Q 008154 525 ALRFAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYE 562 (576)
Q Consensus 525 ~i~~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~ 562 (576)
+|.+++. |++.+.++++.+ +....+++++++.+.
T Consensus 361 ai~~ll~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 396 (398)
T 4fzr_A 361 ACARIRD----DSSYVGNARRLAAEMATLPTPADIVRLIE 396 (398)
T ss_dssp HHHHHHH----CTHHHHHHHHHHHHHTTSCCHHHHHHHHT
T ss_pred HHHHHHh----CHHHHHHHHHHHHHHHcCCCHHHHHHHHh
Confidence 8888876 777777777765 567889999888764
No 40
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.52 E-value=2.6e-12 Score=133.40 Aligned_cols=159 Identities=15% Similarity=0.010 Sum_probs=106.2
Q ss_pred CCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEE-EeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCE
Q 008154 381 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVM-LGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDI 459 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii-~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv 459 (576)
...++++.|+....+ .+.+.+.++.+.+.++++++ +|++.. .+. +. ....++. +.++.+.. .+++.||+
T Consensus 231 ~~~v~v~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~----~~-~~~~~v~-~~~~~~~~--~ll~~ad~ 300 (402)
T 3ia7_A 231 APVLLVSLGNQFNEH-PEFFRACAQAFADTPWHVVMAIGGFLD-PAV----LG-PLPPNVE-AHQWIPFH--SVLAHARA 300 (402)
T ss_dssp CCEEEEECCSCSSCC-HHHHHHHHHHHTTSSCEEEEECCTTSC-GGG----GC-SCCTTEE-EESCCCHH--HHHTTEEE
T ss_pred CCEEEEECCCCCcch-HHHHHHHHHHHhcCCcEEEEEeCCcCC-hhh----hC-CCCCcEE-EecCCCHH--HHHhhCCE
Confidence 456778889887655 23333334444333577666 565421 111 11 1234554 45564443 79999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEeCc-----cccccccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHHHHH
Q 008154 460 LLMPSRFEPCGLNQLYAMRYGTIPVVHAT-----GGLRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAIRT 532 (576)
Q Consensus 460 ~v~ps~~E~~g~s~lEAma~G~pvIat~~-----gg~~e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~l~~ 532 (576)
+|..+ -..|++|||++|+|+|+... .++.+.+.+ .+.|..++++ +++++++++.+++.
T Consensus 301 ~v~~~----G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~----------~g~g~~~~~~~~~~~~l~~~~~~ll~- 365 (402)
T 3ia7_A 301 CLTHG----TTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIE----------LGLGSVLRPDQLEPASIREAVERLAA- 365 (402)
T ss_dssp EEECC----CHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHH----------TTSEEECCGGGCSHHHHHHHHHHHHH-
T ss_pred EEECC----CHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHH----------cCCEEEccCCCCCHHHHHHHHHHHHc-
Confidence 99764 23788999999999996544 355566665 6788888765 78999999998876
Q ss_pred hhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHH
Q 008154 533 YREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEW 567 (576)
Q Consensus 533 ~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~ 567 (576)
|++.+.++.+.+ +....+++++++.+.+++..
T Consensus 366 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 366 ---DSAVRERVRRMQRDILSSGGPARAADEVEAYLGR 399 (402)
T ss_dssp ---CHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhh
Confidence 777777766654 45678899999988887764
No 41
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.49 E-value=1.3e-12 Score=135.69 Aligned_cols=154 Identities=16% Similarity=0.110 Sum_probs=107.4
Q ss_pred CCCEEEEecccccc-cCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCE
Q 008154 381 DCPLIGFIGRLDYQ-KGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDI 459 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~-Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv 459 (576)
...++++.|++... ++.+.+.++++.+.+.++++++++.+.. .+. +. ....++. +.++. + ...++..||+
T Consensus 232 ~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~-~~~----l~-~~~~~v~-~~~~~-~-~~~ll~~ad~ 302 (398)
T 3oti_A 232 RPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLD-ISP----LG-TLPRNVR-AVGWT-P-LHTLLRTCTA 302 (398)
T ss_dssp SCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSC-CGG----GC-SCCTTEE-EESSC-C-HHHHHTTCSE
T ss_pred CCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcC-hhh----hc-cCCCcEE-EEccC-C-HHHHHhhCCE
Confidence 45678888999754 4666666666666556899999988752 111 11 2234554 44554 2 3368999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEE----eCccccc--cccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHHHH
Q 008154 460 LLMPSRFEPCGLNQLYAMRYGTIPVV----HATGGLR--DTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAIR 531 (576)
Q Consensus 460 ~v~ps~~E~~g~s~lEAma~G~pvIa----t~~gg~~--e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~l~ 531 (576)
+|.. +-+.|++|||++|+|+|+ .+..++. +.+.+ .+.|+.++++ +++.++ +++.
T Consensus 303 ~v~~----~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~----------~g~g~~~~~~~~~~~~l~----~ll~ 364 (398)
T 3oti_A 303 VVHH----GGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSR----------RGIGLVSTSDKVDADLLR----RLIG 364 (398)
T ss_dssp EEEC----CCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHH----------HTSEEECCGGGCCHHHHH----HHHH
T ss_pred EEEC----CCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHH----------CCCEEeeCCCCCCHHHHH----HHHc
Confidence 9954 455799999999999999 4556777 77776 6889998765 455444 5543
Q ss_pred HhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHH
Q 008154 532 TYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVF 565 (576)
Q Consensus 532 ~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y 565 (576)
|++.++++.+.+ +....+++++++.+.++.
T Consensus 365 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 365 ----DESLRTAAREVREEMVALPTPAETVRRIVERI 396 (398)
T ss_dssp ----CHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 788777777665 567889999998887654
No 42
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.46 E-value=2e-11 Score=127.43 Aligned_cols=159 Identities=12% Similarity=0.040 Sum_probs=103.1
Q ss_pred CCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEE-EeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCE
Q 008154 381 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVM-LGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDI 459 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii-~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv 459 (576)
...++++.|+...... +.+...++.+.+.++++++ +|++.. .+.. + ....++. +.++.+.. .+++.||+
T Consensus 247 ~~~v~v~~Gs~~~~~~-~~~~~~~~al~~~~~~~v~~~g~~~~-~~~l-~----~~~~~v~-~~~~~~~~--~ll~~ad~ 316 (415)
T 3rsc_A 247 LPVVLVSLGTTFNDRP-GFFRDCARAFDGQPWHVVMTLGGQVD-PAAL-G----DLPPNVE-AHRWVPHV--KVLEQATV 316 (415)
T ss_dssp CCEEEEECTTTSCCCH-HHHHHHHHHHTTSSCEEEEECTTTSC-GGGG-C----CCCTTEE-EESCCCHH--HHHHHEEE
T ss_pred CCEEEEECCCCCCChH-HHHHHHHHHHhcCCcEEEEEeCCCCC-hHHh-c----CCCCcEE-EEecCCHH--HHHhhCCE
Confidence 4567788898764432 3333333334333588877 565521 1111 1 1234554 34554433 68999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEeC----ccccccccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHHHHHh
Q 008154 460 LLMPSRFEPCGLNQLYAMRYGTIPVVHA----TGGLRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAIRTY 533 (576)
Q Consensus 460 ~v~ps~~E~~g~s~lEAma~G~pvIat~----~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~l~~~ 533 (576)
+|..+ -..|++|||++|+|+|+.. ...+.+.+.+ .+.|..+..+ +++++++++.+++.
T Consensus 317 ~v~~~----G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~----------~g~g~~~~~~~~~~~~l~~~i~~ll~-- 380 (415)
T 3rsc_A 317 CVTHG----GMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQ----------LGLGAVLPGEKADGDTLLAAVGAVAA-- 380 (415)
T ss_dssp EEESC----CHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHH----------HTCEEECCGGGCCHHHHHHHHHHHHT--
T ss_pred EEECC----cHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHH----------cCCEEEcccCCCCHHHHHHHHHHHHc--
Confidence 99764 2368899999999999953 3345555555 5778888765 78888888888875
Q ss_pred hhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHH
Q 008154 534 REHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFEW 567 (576)
Q Consensus 534 ~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~~ 567 (576)
|++.+.++.+.+ +....+++++++.+.+++.+
T Consensus 381 --~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 414 (415)
T 3rsc_A 381 --DPALLARVEAMRGHVRRAGGAARAADAVEAYLAR 414 (415)
T ss_dssp --CHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhc
Confidence 777777766654 45678888888888777654
No 43
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.44 E-value=8.2e-13 Score=136.83 Aligned_cols=158 Identities=9% Similarity=0.029 Sum_probs=107.2
Q ss_pred CCCEEEEecccccccCH-HHHHHHHHhhhc-CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCC
Q 008154 381 DCPLIGFIGRLDYQKGI-DLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCD 458 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~-~~ll~a~~~L~~-~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~D 458 (576)
+..++++.|+....|+. ..+++++....+ ++++++++|.+.. .+. +. ....++. +.++.+. ..+++.||
T Consensus 218 ~~~vlv~~G~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~~~~~-~~~----l~-~~~~~v~-~~~~~~~--~~ll~~ad 288 (391)
T 3tsa_A 218 ARRVCICMGRMVLNATGPAPLLRAVAAATELPGVEAVIAVPPEH-RAL----LT-DLPDNAR-IAESVPL--NLFLRTCE 288 (391)
T ss_dssp SEEEEEECCHHHHHHHCSHHHHHHHHHHHTSTTEEEEEECCGGG-GGG----CT-TCCTTEE-ECCSCCG--GGTGGGCS
T ss_pred CCEEEEEcCCCCCcccchHHHHHHHHHhccCCCeEEEEEECCcc-hhh----cc-cCCCCEE-EeccCCH--HHHHhhCC
Confidence 44667778998764433 555555544433 4899999987642 111 11 2233443 3455332 24779999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEeC----ccccccccccccccccCCCCCcceeEeCC----CCHHHHHHHHHHHH
Q 008154 459 ILLMPSRFEPCGLNQLYAMRYGTIPVVHA----TGGLRDTVENFNPFAREGSGEGTGWSFLP----LSEESMLTALRFAI 530 (576)
Q Consensus 459 v~v~ps~~E~~g~s~lEAma~G~pvIat~----~gg~~e~i~~~~~~~~~~~~~~~G~~~~~----~d~~~la~~i~~~l 530 (576)
++|.. +-+.+.+|||++|+|+|+.. ..+..+.+.+ .+.|..+++ .+++++++++.+++
T Consensus 289 ~~v~~----~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~----------~g~g~~~~~~~~~~~~~~l~~ai~~ll 354 (391)
T 3tsa_A 289 LVICA----GGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAA----------AGAGICLPDEQAQSDHEQFTDSIATVL 354 (391)
T ss_dssp EEEEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHH----------TTSEEECCSHHHHTCHHHHHHHHHHHH
T ss_pred EEEeC----CCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHH----------cCCEEecCcccccCCHHHHHHHHHHHH
Confidence 99954 44579999999999999954 3445566666 678999887 68899999988887
Q ss_pred HHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHH
Q 008154 531 RTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVF 565 (576)
Q Consensus 531 ~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y 565 (576)
. |++.+.++++.+ +....+++++++.+.++.
T Consensus 355 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 387 (391)
T 3tsa_A 355 G----DTGFAAAAIKLSDEITAMPHPAALVRTLENTA 387 (391)
T ss_dssp T----CTHHHHHHHHHHHHHHTSCCHHHHHHHHHHC-
T ss_pred c----CHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 5 777777776655 556789999888876654
No 44
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.38 E-value=1.2e-10 Score=120.08 Aligned_cols=154 Identities=13% Similarity=0.127 Sum_probs=105.8
Q ss_pred CCCEEEEecccccc-------cCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHH
Q 008154 381 DCPLIGFIGRLDYQ-------KGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRI 453 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~-------Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 453 (576)
...++++.|++... +.+..+++++..+ ++++++++.+ +..+ .+. ....++.. ++.+ . ..+
T Consensus 210 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~---~~~~~~~~g~-~~~~----~l~-~~~~~v~~--~~~~-~-~~~ 276 (384)
T 2p6p_A 210 RQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW---DVELIVAAPD-TVAE----ALR-AEVPQARV--GWTP-L-DVV 276 (384)
T ss_dssp SCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT---TCEEEEECCH-HHHH----HHH-HHCTTSEE--ECCC-H-HHH
T ss_pred CCEEEEECCCCCccccccccHHHHHHHHHHHhcC---CcEEEEEeCC-CCHH----hhC-CCCCceEE--cCCC-H-HHH
Confidence 35678889998865 5677788887665 7888886554 2211 111 23334443 4432 2 358
Q ss_pred HhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccc----cccccccccccccCCCCCcceeEeCCC--CHHHHHHHHH
Q 008154 454 TAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG----LRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALR 527 (576)
Q Consensus 454 l~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg----~~e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~ 527 (576)
++.||++|..+ -+.|++|||++|+|+|+...++ +.+.+.+ .++|+.+++. ++++++++|.
T Consensus 277 l~~~d~~v~~~----G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~----------~g~g~~~~~~~~~~~~l~~~i~ 342 (384)
T 2p6p_A 277 APTCDLLVHHA----GGVSTLTGLSAGVPQLLIPKGSVLEAPARRVAD----------YGAAIALLPGEDSTEAIADSCQ 342 (384)
T ss_dssp GGGCSEEEECS----CTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHH----------HTSEEECCTTCCCHHHHHHHHH
T ss_pred HhhCCEEEeCC----cHHHHHHHHHhCCCEEEccCcccchHHHHHHHH----------CCCeEecCcCCCCHHHHHHHHH
Confidence 89999999863 3468999999999999987643 5555655 5788888754 6889999998
Q ss_pred HHHHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHH
Q 008154 528 FAIRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVF 565 (576)
Q Consensus 528 ~~l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y 565 (576)
+++. |++.++++.+.+ +...-..++.++...++.
T Consensus 343 ~ll~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 378 (384)
T 2p6p_A 343 ELQA----KDTYARRAQDLSREISGMPLPATVVTALEQLA 378 (384)
T ss_dssp HHHH----CHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHc----CHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 8876 777777766655 444557777777666554
No 45
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.37 E-value=8.8e-13 Score=135.86 Aligned_cols=220 Identities=10% Similarity=0.012 Sum_probs=135.6
Q ss_pred HhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCC-CCCCCCCCCCCccccccCCcCCcccchHhHHHHHHH
Q 008154 295 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNG-IDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 373 (576)
Q Consensus 295 ~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nG-vd~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 373 (576)
+.+|.+++.++..++.+.+ .+.+++++.++.|. +|...+.. ....+..+++.
T Consensus 145 ~~a~~~~~~te~~~~~l~~----------~G~~~~~I~vtGnp~~D~~~~~~-----------------~~~~~~~~~~~ 197 (385)
T 4hwg_A 145 HISDVNITLTEHARRYLIA----------EGLPAELTFKSGSHMPEVLDRFM-----------------PKILKSDILDK 197 (385)
T ss_dssp HHCSEEEESSHHHHHHHHH----------TTCCGGGEEECCCSHHHHHHHHH-----------------HHHHHCCHHHH
T ss_pred hhhceeecCCHHHHHHHHH----------cCCCcCcEEEECCchHHHHHHhh-----------------hhcchhHHHHH
Confidence 5788999999877766532 24456688888884 34211100 00113346777
Q ss_pred cCCCCCCCCCEEEEecccc---cccCHHHHHHHHHhhhcC-CcEEEEEeCCChhhHHHHHHH-H-HHhcCceEEEccCCh
Q 008154 374 LGLPIRPDCPLIGFIGRLD---YQKGIDLIRLAAPEILAD-DIQFVMLGSGDPQFESWMRDT-E-ATYKDKYRGWVGFNV 447 (576)
Q Consensus 374 ~~i~~~~~~~~i~~~Gr~~---~~Kg~~~ll~a~~~L~~~-~~~lii~G~g~~~~~~~~~~~-~-~~~~~~~~~~~~~~~ 447 (576)
+|++ ++..++++.+|.+ ..|++..+++|+.++.++ ++++++... |...+..+.. . .....++........
T Consensus 198 lgl~--~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~--p~~~~~l~~~~~~~~~~~~v~l~~~lg~ 273 (385)
T 4hwg_A 198 LSLT--PKQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTH--PRTKKRLEDLEGFKELGDKIRFLPAFSF 273 (385)
T ss_dssp TTCC--TTSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEEC--HHHHHHHHTSGGGGGTGGGEEECCCCCH
T ss_pred cCCC--cCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECC--hHHHHHHHHHHHHhcCCCCEEEEcCCCH
Confidence 8886 3556677777754 347899999999998653 677776543 3333333222 1 011234544444443
Q ss_pred hHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCcc-ccccccccccccccCCCCCcceeEeCCCCHHHHHHHH
Q 008154 448 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG-GLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTAL 526 (576)
Q Consensus 448 ~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~g-g~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i 526 (576)
.....+++.||+++.+| |....||+++|+|+|+.... ..+|.+.. +++.+++. |++++++++
T Consensus 274 ~~~~~l~~~adlvvt~S-----Ggv~~EA~alG~Pvv~~~~~ter~e~v~~-----------G~~~lv~~-d~~~i~~ai 336 (385)
T 4hwg_A 274 TDYVKLQMNAFCILSDS-----GTITEEASILNLPALNIREAHERPEGMDA-----------GTLIMSGF-KAERVLQAV 336 (385)
T ss_dssp HHHHHHHHHCSEEEECC-----TTHHHHHHHTTCCEEECSSSCSCTHHHHH-----------TCCEECCS-SHHHHHHHH
T ss_pred HHHHHHHHhCcEEEECC-----ccHHHHHHHcCCCEEEcCCCccchhhhhc-----------CceEEcCC-CHHHHHHHH
Confidence 34568999999999766 56779999999999998654 36777665 46777654 899999999
Q ss_pred HHHHHHhhhCHHHHHHHHHHH--H-hhhCCHHHHHHHHHHHHH
Q 008154 527 RFAIRTYREHKSSWEGLMRRG--M-EKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 527 ~~~l~~~~~~~~~~~~~~~~a--~-~~~fs~~~~~~~y~~~y~ 566 (576)
.+++. |+..+.+|++++ . ....+.+++++...+.+.
T Consensus 337 ~~ll~----d~~~~~~m~~~~~~~~g~g~aa~rI~~~l~~~~~ 375 (385)
T 4hwg_A 337 KTITE----EHDNNKRTQGLVPDYNEAGLVSKKILRIVLSYVD 375 (385)
T ss_dssp HHHHT----TCBTTBCCSCCCHHHHTCCCHHHHHHHHHHHHHH
T ss_pred HHHHh----ChHHHHHhhccCCCCCCCChHHHHHHHHHHHHhh
Confidence 98875 444443332211 2 333455666665555443
No 46
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.15 E-value=3.8e-08 Score=102.82 Aligned_cols=158 Identities=12% Similarity=0.023 Sum_probs=99.1
Q ss_pred CCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEE-EeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCE
Q 008154 381 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVM-LGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDI 459 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii-~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv 459 (576)
...++++.|+.. .+..+.+.+.++.+.+.++++++ +|.+... +.. .....++. +.++-+.. .+++.||+
T Consensus 255 ~~~v~v~~Gs~~-~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~-~~~-----~~~~~~v~-~~~~~~~~--~~l~~~d~ 324 (424)
T 2iya_A 255 RPVLLIALGSAF-TDHLDFYRTCLSAVDGLDWHVVLSVGRFVDP-ADL-----GEVPPNVE-VHQWVPQL--DILTKASA 324 (424)
T ss_dssp CCEEEEECCSSS-CCCHHHHHHHHHHHTTCSSEEEEECCTTSCG-GGG-----CSCCTTEE-EESSCCHH--HHHTTCSE
T ss_pred CCEEEEEcCCCC-cchHHHHHHHHHHHhcCCcEEEEEECCcCCh-HHh-----ccCCCCeE-EecCCCHH--HHHhhCCE
Confidence 456777889887 44444444444555445777754 6765321 111 11334544 44554433 68999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEeCccc----cccccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHHHHHh
Q 008154 460 LLMPSRFEPCGLNQLYAMRYGTIPVVHATGG----LRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAIRTY 533 (576)
Q Consensus 460 ~v~ps~~E~~g~s~lEAma~G~pvIat~~gg----~~e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~l~~~ 533 (576)
+|..+ -+.|++|||++|+|+|+....+ +.+.+.+ .+.|+.++.. +.++++++|.+++.
T Consensus 325 ~v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~----------~g~g~~~~~~~~~~~~l~~~i~~ll~-- 388 (424)
T 2iya_A 325 FITHA----GMGSTMEALSNAVPMVAVPQIAEQTMNAERIVE----------LGLGRHIPRDQVTAEKLREAVLAVAS-- 388 (424)
T ss_dssp EEECC----CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH----------TTSEEECCGGGCCHHHHHHHHHHHHH--
T ss_pred EEECC----chhHHHHHHHcCCCEEEecCccchHHHHHHHHH----------CCCEEEcCcCCCCHHHHHHHHHHHHc--
Confidence 98642 2379999999999999987642 3344444 4678877654 78889998888875
Q ss_pred hhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHH
Q 008154 534 REHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 534 ~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~ 566 (576)
|++.++++.+.+ +...-..++.++.+.+...
T Consensus 389 --~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 421 (424)
T 2iya_A 389 --DPGVAERLAAVRQEIREAGGARAAADILEGILA 421 (424)
T ss_dssp --CHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHh
Confidence 676666555543 3344566666666665543
No 47
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=98.96 E-value=8.6e-09 Score=109.78 Aligned_cols=181 Identities=14% Similarity=0.077 Sum_probs=110.9
Q ss_pred cCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEE--EEeCCChhhHHHHHHH-HHHhcCceEEEccCChh
Q 008154 374 LGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFV--MLGSGDPQFESWMRDT-EATYKDKYRGWVGFNVP 448 (576)
Q Consensus 374 ~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~li--i~G~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 448 (576)
++++.+.+.++++..++ ..|..+.+++++.++.+ ++..+. ++|+++.......+.+ +.....++.+....+.+
T Consensus 433 ~~lp~~~G~v~Fg~fn~--~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~~~~~~~GI~~Rv~F~g~~p~~ 510 (631)
T 3q3e_A 433 YLLRENPEVVNIGIAST--TMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFIKSYLGDSATAHPHSPYH 510 (631)
T ss_dssp CCCCSCCSEEEEEEEEC--STTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHHHHHHHHHHHHGGGEEEECCCCHH
T ss_pred ccCCcCCCeEEEEECCc--cccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHHHHHHHHHcCCCccEEEcCCCCHH
Confidence 45553223567777776 47889999999999876 444443 3675432223333333 23444566554433444
Q ss_pred HHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHH
Q 008154 449 ISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRF 528 (576)
Q Consensus 449 ~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~ 528 (576)
.....++.+|++|.|+.+.+ |+|.+|||++|+|||+.....+.+-+..--.. ..|-.+|++.. |.++.++....
T Consensus 511 e~la~y~~aDIfLDpfpy~G-gtTtlEALwmGVPVVTl~G~~~asRvgaSlL~----~~GLpE~LIA~-d~eeYv~~Av~ 584 (631)
T 3q3e_A 511 QYLRILHNCDMMVNPFPFGN-TNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFK----RLGLPEWLIAN-TVDEYVERAVR 584 (631)
T ss_dssp HHHHHHHTCSEEECCSSSCC-SHHHHHHHHTTCCEEEECCSSHHHHHHHHHHH----HTTCCGGGEES-SHHHHHHHHHH
T ss_pred HHHHHHhcCcEEEeCCcccC-ChHHHHHHHcCCCEEeccCCcHHHHhHHHHHH----hcCCCcceecC-CHHHHHHHHHH
Confidence 55578899999999998755 99999999999999997766655444210000 00344543333 67777776666
Q ss_pred HHHHhhhCHHHHHHHHHHHHhh-----hCCHHHHHHHHHHHHHHh
Q 008154 529 AIRTYREHKSSWEGLMRRGMEK-----DYTWENAAIQYEQVFEWA 568 (576)
Q Consensus 529 ~l~~~~~~~~~~~~~~~~a~~~-----~fs~~~~~~~y~~~y~~~ 568 (576)
+.. |++.+.++.++.... .|+ ..+++|.+.|+.+
T Consensus 585 La~----D~~~l~~LR~~Lr~~~~~spLFd--~~~~~~e~~ye~~ 623 (631)
T 3q3e_A 585 LAE----NHQERLELRRYIIENNGLNTLFT--GDPRPMGQVFLEK 623 (631)
T ss_dssp HHH----CHHHHHHHHHHHHHSCCHHHHTC--SCCTHHHHHHHHH
T ss_pred HhC----CHHHHHHHHHHHHHHhhhCCCcc--hhHHHHHHHHHHH
Confidence 654 888888887765322 343 3344444444444
No 48
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=98.92 E-value=3.3e-07 Score=95.03 Aligned_cols=153 Identities=14% Similarity=-0.013 Sum_probs=95.7
Q ss_pred CCCEEEEecccc-cccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCE
Q 008154 381 DCPLIGFIGRLD-YQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDI 459 (576)
Q Consensus 381 ~~~~i~~~Gr~~-~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv 459 (576)
...++++.|+.. ..+.+..+++++..+ ++++++.+.... .+. .....++. +.++.+. ..++..||+
T Consensus 221 ~~~Vlv~~Gs~~~~~~~~~~~~~al~~~---~~~vv~~~g~~~-~~~------~~~~~~v~-~~~~~~~--~~ll~~~d~ 287 (404)
T 3h4t_A 221 SPPVYVGFGSGPAPAEAARVAIEAVRAQ---GRRVVLSSGWAG-LGR------IDEGDDCL-VVGEVNH--QVLFGRVAA 287 (404)
T ss_dssp SCCEEECCTTSCCCTTHHHHHHHHHHHT---TCCEEEECTTTT-CCC------SSCCTTEE-EESSCCH--HHHGGGSSE
T ss_pred CCeEEEECCCCCCcHHHHHHHHHHHHhC---CCEEEEEeCCcc-ccc------ccCCCCEE-EecCCCH--HHHHhhCcE
Confidence 456788889988 677778888888776 677777654321 110 01233444 3455332 358899999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEeCcccc----ccccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHHHHHh
Q 008154 460 LLMPSRFEPCGLNQLYAMRYGTIPVVHATGGL----RDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAIRTY 533 (576)
Q Consensus 460 ~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~----~e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~l~~~ 533 (576)
+|..+ -..|..||+++|+|+|+....+- .+.+.. .+.|..++.. +.+++++++.+++
T Consensus 288 ~v~~g----G~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~----------~G~g~~l~~~~~~~~~l~~ai~~ll--- 350 (404)
T 3h4t_A 288 VVHHG----GAGTTTAVTRAGAPQVVVPQKADQPYYAGRVAD----------LGVGVAHDGPTPTVESLSAALATAL--- 350 (404)
T ss_dssp EEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH----------HTSEEECSSSSCCHHHHHHHHHHHT---
T ss_pred EEECC----cHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHH----------CCCEeccCcCCCCHHHHHHHHHHHh---
Confidence 99654 23688999999999999755432 233433 4677777643 6788888888775
Q ss_pred hhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHH
Q 008154 534 REHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 534 ~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~ 566 (576)
+ ++.++++.+.+ +.. -.++++++...+.+.
T Consensus 351 -~-~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~ 382 (404)
T 3h4t_A 351 -T-PGIRARAAAVAGTIRT-DGTTVAAKLLLEAIS 382 (404)
T ss_dssp -S-HHHHHHHHHHHTTCCC-CHHHHHHHHHHHHHH
T ss_pred -C-HHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHh
Confidence 3 45555554443 223 455666666555543
No 49
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=98.79 E-value=1.7e-07 Score=96.82 Aligned_cols=154 Identities=18% Similarity=0.128 Sum_probs=89.9
Q ss_pred CCCEEEEecccccc-cCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCE
Q 008154 381 DCPLIGFIGRLDYQ-KGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDI 459 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~-Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv 459 (576)
...++++.|++... ++.+.+.++++.+.+.+.++++.+.+... .. ......++. ..++-+ ...++..+|+
T Consensus 237 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~-~~-----~~~~~~~v~-~~~~~p--~~~lL~~~~~ 307 (400)
T 4amg_A 237 RRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDL-AL-----LGELPANVR-VVEWIP--LGALLETCDA 307 (400)
T ss_dssp CCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCC-CC-----CCCCCTTEE-EECCCC--HHHHHTTCSE
T ss_pred CcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCccc-cc-----cccCCCCEE-EEeecC--HHHHhhhhhh
Confidence 44566777887654 34455566666666667888876654311 00 012234544 333422 2258899999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEeCccc----cccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhh
Q 008154 460 LLMPSRFEPCGLNQLYAMRYGTIPVVHATGG----LRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYRE 535 (576)
Q Consensus 460 ~v~ps~~E~~g~s~lEAma~G~pvIat~~gg----~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~ 535 (576)
+|.- +-..|++|||++|+|+|+....+ +.+.+.+ .+.|+.+++. +..+++|.+++.
T Consensus 308 ~v~h----~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~----------~G~g~~l~~~--~~~~~al~~lL~---- 367 (400)
T 4amg_A 308 IIHH----GGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTG----------LGIGFDAEAG--SLGAEQCRRLLD---- 367 (400)
T ss_dssp EEEC----CCHHHHHHHHHHTCCEEECCC---CHHHHHHHHH----------HTSEEECCTT--TCSHHHHHHHHH----
T ss_pred eecc----CCccHHHHHHHhCCCEEEecCcccHHHHHHHHHH----------CCCEEEcCCC--CchHHHHHHHHc----
Confidence 9853 34578999999999999965433 3344444 4567776543 345667888775
Q ss_pred CHHHHHHHHHHH--HhhhCCHHHHHHHHHH
Q 008154 536 HKSSWEGLMRRG--MEKDYTWENAAIQYEQ 563 (576)
Q Consensus 536 ~~~~~~~~~~~a--~~~~fs~~~~~~~y~~ 563 (576)
|++.+++..+-+ ++..=+....++.+++
T Consensus 368 d~~~r~~a~~l~~~~~~~~~~~~~a~~le~ 397 (400)
T 4amg_A 368 DAGLREAALRVRQEMSEMPPPAETAAXLVA 397 (400)
T ss_dssp CHHHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 776555444332 3444466666666554
No 50
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=98.68 E-value=1.3e-07 Score=85.36 Aligned_cols=128 Identities=14% Similarity=0.041 Sum_probs=91.0
Q ss_pred CCCEEEEecccc---cccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHH--h
Q 008154 381 DCPLIGFIGRLD---YQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRIT--A 455 (576)
Q Consensus 381 ~~~~i~~~Gr~~---~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll--~ 455 (576)
...++++.|++. +.|.+..+++++..+ +.++++++.+... + ....++. +.++-+. ..++ +
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~---~~~~~~~~g~~~~-~--------~~~~~v~-~~~~~~~--~~~l~~~ 85 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQI---PQKVLWRFDGNKP-D--------TLGLNTR-LYKWIPQ--NDLLGHP 85 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTS---SSEEEEECCSSCC-T--------TCCTTEE-EESSCCH--HHHHTST
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhC---CCeEEEEECCcCc-c--------cCCCcEE-EecCCCH--HHHhcCC
Confidence 456888899986 678888888888665 5788887765421 1 1233554 4455332 1356 8
Q ss_pred cCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCcc----ccccccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHH
Q 008154 456 GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG----GLRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFA 529 (576)
Q Consensus 456 ~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~g----g~~e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~ 529 (576)
.||++|.. +-+.|++|||++|+|+|+.... ++.+.+.+ .+.|+.+++. ++++++++|.++
T Consensus 86 ~ad~~I~~----~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~----------~g~g~~~~~~~~~~~~l~~~i~~l 151 (170)
T 2o6l_A 86 KTRAFITH----GGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA----------RGAAVRVDFNTMSSTDLLNALKRV 151 (170)
T ss_dssp TEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT----------TTSEEECCTTTCCHHHHHHHHHHH
T ss_pred CcCEEEEc----CCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH----------cCCeEEeccccCCHHHHHHHHHHH
Confidence 99999974 4569999999999999999764 34555655 6789988766 789999999988
Q ss_pred HHHhhhCHHHHH
Q 008154 530 IRTYREHKSSWE 541 (576)
Q Consensus 530 l~~~~~~~~~~~ 541 (576)
+. |++.+.
T Consensus 152 l~----~~~~~~ 159 (170)
T 2o6l_A 152 IN----DPSYKE 159 (170)
T ss_dssp HH----CHHHHH
T ss_pred Hc----CHHHHH
Confidence 75 665433
No 51
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=98.64 E-value=2.3e-06 Score=88.97 Aligned_cols=133 Identities=12% Similarity=0.000 Sum_probs=86.8
Q ss_pred CCCEEEEecccc---cccCHHHHHHHHHhhhcCCcEEEEE-eCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhc
Q 008154 381 DCPLIGFIGRLD---YQKGIDLIRLAAPEILADDIQFVML-GSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAG 456 (576)
Q Consensus 381 ~~~~i~~~Gr~~---~~Kg~~~ll~a~~~L~~~~~~lii~-G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 456 (576)
+..++++.|+.. ..|....+++++..+ +++++++ |.++... .....++. +.++-+. ..++..
T Consensus 237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~~~~--------~~~~~~v~-~~~~~~~--~~ll~~ 302 (416)
T 1rrv_A 237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQ---GRRVILSRGWTELVL--------PDDRDDCF-AIDEVNF--QALFRR 302 (416)
T ss_dssp SCCEEECCTTCCSHHHHHHHHHHHHHHHHT---TCCEEEECTTTTCCC--------SCCCTTEE-EESSCCH--HHHGGG
T ss_pred CCeEEEecCCCCccChHHHHHHHHHHHHHC---CCeEEEEeCCccccc--------cCCCCCEE-EeccCCh--HHHhcc
Confidence 356778889985 467777888888776 5667665 6653210 12333443 4455332 357899
Q ss_pred CCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccc----cccccccccccccCCCCCcceeEeCC--CCHHHHHHHHHHHH
Q 008154 457 CDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG----LRDTVENFNPFAREGSGEGTGWSFLP--LSEESMLTALRFAI 530 (576)
Q Consensus 457 ~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg----~~e~i~~~~~~~~~~~~~~~G~~~~~--~d~~~la~~i~~~l 530 (576)
||++|.. +-+.|++||+++|+|+|+....+ +.+.+.+ .+.|+.++. .+.++++++|.++
T Consensus 303 ~d~~v~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~----------~g~g~~~~~~~~~~~~l~~~i~~l- 367 (416)
T 1rrv_A 303 VAAVIHH----GSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAA----------LGIGVAHDGPTPTFESLSAALTTV- 367 (416)
T ss_dssp SSEEEEC----CCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHH----------HTSEEECSSSCCCHHHHHHHHHHH-
T ss_pred CCEEEec----CChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHH----------CCCccCCCCCCCCHHHHHHHHHHh-
Confidence 9999973 33469999999999999976532 3334444 467877754 3677777777776
Q ss_pred HHhhhCHHHHHHHHHH
Q 008154 531 RTYREHKSSWEGLMRR 546 (576)
Q Consensus 531 ~~~~~~~~~~~~~~~~ 546 (576)
. |++.++++.+.
T Consensus 368 ~----~~~~~~~~~~~ 379 (416)
T 1rrv_A 368 L----APETRARAEAV 379 (416)
T ss_dssp T----SHHHHHHHHHH
T ss_pred h----CHHHHHHHHHH
Confidence 4 77666665544
No 52
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=98.45 E-value=1.1e-06 Score=92.11 Aligned_cols=156 Identities=15% Similarity=0.115 Sum_probs=106.7
Q ss_pred CCCEEEEeccccc-----ccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHh
Q 008154 381 DCPLIGFIGRLDY-----QKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA 455 (576)
Q Consensus 381 ~~~~i~~~Gr~~~-----~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 455 (576)
...++++.|++.. .|.+..+++++..+ ++++++++.+.. .+. +. ....++. +.++-+. ..++.
T Consensus 267 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~-~~~----l~-~~~~~v~-~~~~~~~--~~ll~ 334 (441)
T 2yjn_A 267 RRRVCLTLGISSRENSIGQVSIEELLGAVGDV---DAEIIATFDAQQ-LEG----VA-NIPDNVR-TVGFVPM--HALLP 334 (441)
T ss_dssp SCEEEEEC----------CCSTTTTHHHHHTS---SSEEEECCCTTT-TSS----CS-SCCSSEE-ECCSCCH--HHHGG
T ss_pred CCEEEEECCCCcccccChHHHHHHHHHHHHcC---CCEEEEEECCcc-hhh----hc-cCCCCEE-EecCCCH--HHHHh
Confidence 3457888899875 48888999998775 688888766532 111 11 1233443 4555433 35789
Q ss_pred cCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccc----cccccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHH
Q 008154 456 GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG----LRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFA 529 (576)
Q Consensus 456 ~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg----~~e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~ 529 (576)
.||++|.. +-+.|++|||++|+|+|+....+ +.+.+.+ .+.|+.+++. ++++++++|.++
T Consensus 335 ~ad~~V~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~----------~g~g~~~~~~~~~~~~l~~~i~~l 400 (441)
T 2yjn_A 335 TCAATVHH----GGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQE----------FGAGIALPVPELTPDQLRESVKRV 400 (441)
T ss_dssp GCSEEEEC----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH----------HTSEEECCTTTCCHHHHHHHHHHH
T ss_pred hCCEEEEC----CCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHH----------cCCEEEcccccCCHHHHHHHHHHH
Confidence 99999974 34579999999999999997643 4555655 5788888765 788999999888
Q ss_pred HHHhhhCHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHH
Q 008154 530 IRTYREHKSSWEGLMRRG--MEKDYTWENAAIQYEQVFE 566 (576)
Q Consensus 530 l~~~~~~~~~~~~~~~~a--~~~~fs~~~~~~~y~~~y~ 566 (576)
+. |++.+.++.+.+ +......+++++.+.++..
T Consensus 401 l~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 401 LD----DPAHRAGAARMRDDMLAEPSPAEVVGICEELAA 435 (441)
T ss_dssp HH----CHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred hc----CHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 75 777777766654 4567888888888777654
No 53
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=98.03 E-value=2.2e-05 Score=81.48 Aligned_cols=156 Identities=13% Similarity=0.029 Sum_probs=97.6
Q ss_pred CCCEEEEeccc-ccccCHHHHHHHHHhhhcCCcEEEEE-eCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCC
Q 008154 381 DCPLIGFIGRL-DYQKGIDLIRLAAPEILADDIQFVML-GSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCD 458 (576)
Q Consensus 381 ~~~~i~~~Gr~-~~~Kg~~~ll~a~~~L~~~~~~lii~-G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~D 458 (576)
...++++.|+. ...|..+.++++++.+ +.+++++ |.++... .....++. +.++-+.. .++..||
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~~~~--------~~~~~~v~-~~~~~~~~--~~l~~~d 303 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAH---GRRVILSRGWADLVL--------PDDGADCF-AIGEVNHQ--VLFGRVA 303 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHT---TCCEEECTTCTTCCC--------SSCGGGEE-ECSSCCHH--HHGGGSS
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHC---CCeEEEEeCCCcccc--------cCCCCCEE-EeCcCChH--HHHhhCC
Confidence 35678888998 4888888899999876 4566665 7654210 11223443 45554332 4789999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEeCccc----cccccccccccccCCCCCcceeEeCCC--CHHHHHHHHHHHHHH
Q 008154 459 ILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG----LRDTVENFNPFAREGSGEGTGWSFLPL--SEESMLTALRFAIRT 532 (576)
Q Consensus 459 v~v~ps~~E~~g~s~lEAma~G~pvIat~~gg----~~e~i~~~~~~~~~~~~~~~G~~~~~~--d~~~la~~i~~~l~~ 532 (576)
++|..+ -..|++|||++|+|+|+....+ +.+.+.+ .+.|+.++.. +.++++++|.++ .
T Consensus 304 ~~v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~----------~g~g~~~~~~~~~~~~l~~~i~~l-~- 367 (415)
T 1iir_A 304 AVIHHG----GAGTTHVAARAGAPQILLPQMADQPYYAGRVAE----------LGVGVAHDGPIPTFDSLSAALATA-L- 367 (415)
T ss_dssp EEEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH----------HTSEEECSSSSCCHHHHHHHHHHH-T-
T ss_pred EEEeCC----ChhHHHHHHHcCCCEEECCCCCccHHHHHHHHH----------CCCcccCCcCCCCHHHHHHHHHHH-c-
Confidence 999752 2369999999999999986643 4444544 5678887643 678777777776 4
Q ss_pred hhhCHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhhC
Q 008154 533 YREHKSSWEGLMRRGMEKDYTWENAAIQYEQVFEWASID 571 (576)
Q Consensus 533 ~~~~~~~~~~~~~~a~~~~fs~~~~~~~y~~~y~~~~~~ 571 (576)
|++.++++.+.+ +.+....-+++..+.++++++.
T Consensus 368 ---~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~ 401 (415)
T 1iir_A 368 ---TPETHARATAVA--GTIRTDGAAVAARLLLDAVSRE 401 (415)
T ss_dssp ---SHHHHHHHHHHH--HHSCSCHHHHHHHHHHHHHHTC
T ss_pred ---CHHHHHHHHHHH--HHHhhcChHHHHHHHHHHHHhc
Confidence 666665554433 2233344444555555555543
No 54
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.64 E-value=0.0023 Score=70.97 Aligned_cols=184 Identities=9% Similarity=-0.089 Sum_probs=108.7
Q ss_pred HHHcCCCCCCCCCEEEEecccccccCHHHHHHHHHhhhc--CCcEEEEEeCCChhhHHHHHHHHHH-h-cCceEEEccCC
Q 008154 371 QKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEAT-Y-KDKYRGWVGFN 446 (576)
Q Consensus 371 ~~~~~i~~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~--~~~~lii~G~g~~~~~~~~~~~~~~-~-~~~~~~~~~~~ 446 (576)
|..+|+| .+.++++...+ .+|=-+..++.+.++.+ ++.+|++............+.+++. . ..++++....+
T Consensus 514 R~~~gLp--~~~v~f~~fN~--~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~~~~~ 589 (723)
T 4gyw_A 514 RSQYGLP--EDAIVYCNFNQ--LYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAP 589 (723)
T ss_dssp GGGGTCC--TTSEEEECCSC--GGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEEECCC
T ss_pred hhhcCCC--CCCEEEEeCCc--cccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEECCCCC
Confidence 4567888 46555555444 46667777888877765 7889988877643323333333321 1 24565554444
Q ss_pred hhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHH
Q 008154 447 VPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTAL 526 (576)
Q Consensus 447 ~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i 526 (576)
.+.-...++.+||++-|..+ +-|+|.+||+.+|+|||+-....+..-+..--.. .-|-.-++. .|.++..+.-
T Consensus 590 ~~~~l~~~~~~Di~LDt~p~-~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~----~~gl~e~ia--~~~~~Y~~~a 662 (723)
T 4gyw_A 590 KEEHVRRGQLADVCLDTPLC-NGHTTGMDVLWAGTPMVTMPGETLASRVAASQLT----CLGCLELIA--KNRQEYEDIA 662 (723)
T ss_dssp HHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHH----HHTCGGGBC--SSHHHHHHHH
T ss_pred HHHHHHHhCCCeEEeCCCCc-CCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHH----HcCCccccc--CCHHHHHHHH
Confidence 44444678999999998776 5689999999999999985432222111100000 001112222 2455544433
Q ss_pred HHHHHHhhhCHHHHHHHHHHH---H--hhhCCHHHHHHHHHHHHHHhh
Q 008154 527 RFAIRTYREHKSSWEGLMRRG---M--EKDYTWENAAIQYEQVFEWAS 569 (576)
Q Consensus 527 ~~~l~~~~~~~~~~~~~~~~a---~--~~~fs~~~~~~~y~~~y~~~~ 569 (576)
.++. .|++.+.++.++- + ..-|+..++++.+++.|+.+.
T Consensus 663 ~~la----~d~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w 706 (723)
T 4gyw_A 663 VKLG----TDLEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMW 706 (723)
T ss_dssp HHHH----HCHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHH
T ss_pred HHHh----cCHHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHH
Confidence 3333 3666555544332 2 236999999999999998874
No 55
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=95.81 E-value=0.066 Score=53.38 Aligned_cols=112 Identities=16% Similarity=0.116 Sum_probs=74.3
Q ss_pred HHHHHHHcCCCCCCCCCEEEEecc-cccccCHH--HHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhc----Cce
Q 008154 367 KIALQKELGLPIRPDCPLIGFIGR-LDYQKGID--LIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYK----DKY 439 (576)
Q Consensus 367 ~~~~~~~~~i~~~~~~~~i~~~Gr-~~~~Kg~~--~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~----~~~ 439 (576)
.+.+++.+|++. ++..+++..|. ..+.|.+. .+.+++++|.++++++++.|... ..+..+.+.+... .++
T Consensus 167 ~~~~~~~~~~~~-~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~--e~~~~~~i~~~~~~~~~~~~ 243 (348)
T 1psw_A 167 KSYTCNQFSLSS-ERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAK--DHEAGNEILAALNTEQQAWC 243 (348)
T ss_dssp HHHHHHHTTCCS-SSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGG--GHHHHHHHHTTSCHHHHTTE
T ss_pred HHHHHHHhCCCC-CCcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChh--hHHHHHHHHHhhhhccccce
Confidence 445667777652 23345555665 55667765 88888888877789999988643 3444455543322 244
Q ss_pred EEEcc-CChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEe
Q 008154 440 RGWVG-FNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH 486 (576)
Q Consensus 440 ~~~~~-~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat 486 (576)
+.+.+ .+..+...+++.||++|-+. .|..-+ |.|+|+|+|+-
T Consensus 244 ~~l~g~~sl~e~~ali~~a~l~I~~D----sg~~Hl-Aaa~g~P~v~l 286 (348)
T 1psw_A 244 RNLAGETQLDQAVILIAACKAIVTND----SGLMHV-AAALNRPLVAL 286 (348)
T ss_dssp EECTTTSCHHHHHHHHHTSSEEEEES----SHHHHH-HHHTTCCEEEE
T ss_pred EeccCcCCHHHHHHHHHhCCEEEecC----CHHHHH-HHHcCCCEEEE
Confidence 44444 34556668999999999875 455555 99999999995
No 56
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=95.24 E-value=0.03 Score=54.25 Aligned_cols=93 Identities=10% Similarity=0.001 Sum_probs=58.8
Q ss_pred CEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEe
Q 008154 383 PLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLM 462 (576)
Q Consensus 383 ~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ 462 (576)
.++++.|..+...-...+++++... .. -.++.|.+.+..++..+.... . .++. ..++.++ +..+|+.||+.|.
T Consensus 159 ~ILv~~GG~d~~~l~~~vl~~L~~~--~~-i~vv~G~~~~~~~~l~~~~~~-~-~~v~-v~~~~~~-m~~~m~~aDlvI~ 231 (282)
T 3hbm_A 159 DFFICMGGTDIKNLSLQIASELPKT--KI-ISIATSSSNPNLKKLQKFAKL-H-NNIR-LFIDHEN-IAKLMNESNKLII 231 (282)
T ss_dssp EEEEECCSCCTTCHHHHHHHHSCTT--SC-EEEEECTTCTTHHHHHHHHHT-C-SSEE-EEESCSC-HHHHHHTEEEEEE
T ss_pred eEEEEECCCchhhHHHHHHHHhhcC--CC-EEEEECCCchHHHHHHHHHhh-C-CCEE-EEeCHHH-HHHHHHHCCEEEE
Confidence 4566777665443334455554432 23 456678886655554443332 2 2443 3445444 4579999999998
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEeC
Q 008154 463 PSRFEPCGLNQLYAMRYGTIPVVHA 487 (576)
Q Consensus 463 ps~~E~~g~s~lEAma~G~pvIat~ 487 (576)
+ .|+|+.|++++|+|.|...
T Consensus 232 ~-----gG~T~~E~~~~g~P~i~ip 251 (282)
T 3hbm_A 232 S-----ASSLVNEALLLKANFKAIC 251 (282)
T ss_dssp E-----SSHHHHHHHHTTCCEEEEC
T ss_pred C-----CcHHHHHHHHcCCCEEEEe
Confidence 4 4789999999999999865
No 57
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=94.54 E-value=0.27 Score=50.97 Aligned_cols=134 Identities=16% Similarity=0.068 Sum_probs=74.0
Q ss_pred CCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEE
Q 008154 381 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDIL 460 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~ 460 (576)
+..+++..|..... ..+.+.+.+..|.+.+.+++++-..+. .+..-+...+....+... .++-+.. .+++.+++-
T Consensus 273 ~~vVyvsfGS~~~~-~~~~~~el~~~l~~~~~~flw~~~~~~-~~~lp~~~~~~~~~~~~v-v~w~Pq~--~vL~h~~v~ 347 (454)
T 3hbf_A 273 SSVVYISFGSVVTP-PPHELTALAESLEECGFPFIWSFRGDP-KEKLPKGFLERTKTKGKI-VAWAPQV--EILKHSSVG 347 (454)
T ss_dssp TCEEEEECCSSCCC-CHHHHHHHHHHHHHHCCCEEEECCSCH-HHHSCTTHHHHTTTTEEE-ESSCCHH--HHHHSTTEE
T ss_pred CceEEEecCCCCcC-CHHHHHHHHHHHHhCCCeEEEEeCCcc-hhcCCHhHHhhcCCceEE-EeeCCHH--HHHhhcCcC
Confidence 44566777776642 234444444444333667777544321 111111222233445443 3554432 689999954
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEeCccc----cccccccccccccCCCCC-cceeEeCC--CCHHHHHHHHHHHHH
Q 008154 461 LMPSRFEPCGLNQLYAMRYGTIPVVHATGG----LRDTVENFNPFAREGSGE-GTGWSFLP--LSEESMLTALRFAIR 531 (576)
Q Consensus 461 v~ps~~E~~g~s~lEAma~G~pvIat~~gg----~~e~i~~~~~~~~~~~~~-~~G~~~~~--~d~~~la~~i~~~l~ 531 (576)
++-+. +=..|.+||+++|+|.|+....+ +...+.+ . +.|..++. -+.+++.++|.+++.
T Consensus 348 ~fvtH--~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~----------~~g~Gv~l~~~~~~~~~l~~av~~ll~ 413 (454)
T 3hbf_A 348 VFLTH--SGWNSVLECIVGGVPMISRPFFGDQGLNTILTES----------VLEIGVGVDNGVLTKESIKKALELTMS 413 (454)
T ss_dssp EEEEC--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT----------TSCSEEECGGGSCCHHHHHHHHHHHHS
T ss_pred eEEec--CCcchHHHHHHcCCCEecCcccccHHHHHHHHHH----------hhCeeEEecCCCCCHHHHHHHHHHHHC
Confidence 44332 22368899999999999965422 1122222 2 56666654 367888888888874
No 58
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=94.30 E-value=0.16 Score=52.86 Aligned_cols=131 Identities=8% Similarity=-0.038 Sum_probs=71.5
Q ss_pred CCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEE-eCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHh--cC
Q 008154 381 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVML-GSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GC 457 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~-G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~--~~ 457 (576)
+..+++..|..... ..+.+.+.+..|.+.+.+++++ |... ....-+...+....++. ..++-+.. .+++ .+
T Consensus 271 ~~vv~vs~GS~~~~-~~~~~~~~~~~l~~~~~~~lw~~~~~~--~~~l~~~~~~~~~~~~~-v~~w~pq~--~vL~h~~~ 344 (456)
T 2c1x_A 271 TSVVYISFGTVTTP-PPAEVVALSEALEASRVPFIWSLRDKA--RVHLPEGFLEKTRGYGM-VVPWAPQA--EVLAHEAV 344 (456)
T ss_dssp TCEEEEECCSSCCC-CHHHHHHHHHHHHHHTCCEEEECCGGG--GGGSCTTHHHHHTTTEE-EESCCCHH--HHHTSTTE
T ss_pred cceEEEecCccccC-CHHHHHHHHHHHHhcCCeEEEEECCcc--hhhCCHHHHhhcCCceE-EecCCCHH--HHhcCCcC
Confidence 44666777777643 2344444444443335666654 4321 11100111112233443 33454332 5788 67
Q ss_pred CEEEeCCCCCCCcHHHHHHHHcCCceEEeCccc----cccccccccccccCCCCC-cceeEeCCC--CHHHHHHHHHHHH
Q 008154 458 DILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG----LRDTVENFNPFAREGSGE-GTGWSFLPL--SEESMLTALRFAI 530 (576)
Q Consensus 458 Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg----~~e~i~~~~~~~~~~~~~-~~G~~~~~~--d~~~la~~i~~~l 530 (576)
|++|.- +=..|.+||+++|+|.|+....+ +...+.+ . +.|+.++.+ +.++++++|.+++
T Consensus 345 ~~fvth----~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~----------~~g~g~~l~~~~~~~~~l~~~i~~ll 410 (456)
T 2c1x_A 345 GAFVTH----CGWNSLWESVAGGVPLICRPFFGDQRLNGRMVED----------VLEIGVRIEGGVFTKSGLMSCFDQIL 410 (456)
T ss_dssp EEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH----------TSCCEEECGGGSCCHHHHHHHHHHHH
T ss_pred CEEEec----CCcchHHHHHHhCceEEecCChhhHHHHHHHHHH----------HhCeEEEecCCCcCHHHHHHHHHHHH
Confidence 788753 34578999999999999975421 1222222 3 566666532 6788888888887
Q ss_pred H
Q 008154 531 R 531 (576)
Q Consensus 531 ~ 531 (576)
.
T Consensus 411 ~ 411 (456)
T 2c1x_A 411 S 411 (456)
T ss_dssp H
T ss_pred C
Confidence 5
No 59
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=93.77 E-value=0.71 Score=48.25 Aligned_cols=136 Identities=7% Similarity=-0.133 Sum_probs=73.5
Q ss_pred CCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCCh--------------hhH-HHHHHHHHHhcCceEEEccC
Q 008154 381 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDP--------------QFE-SWMRDTEATYKDKYRGWVGF 445 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~--------------~~~-~~~~~~~~~~~~~~~~~~~~ 445 (576)
...+++..|.... ...+.+.+.+..|.+.+.+++++-.... ... ..-+...++...+-....++
T Consensus 268 ~~vvyvs~GS~~~-~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w 346 (480)
T 2vch_A 268 GSVLYVSFGSGGT-LTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFW 346 (480)
T ss_dssp TCEEEEECTTTCC-CCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESC
T ss_pred CceEEEecccccC-CCHHHHHHHHHHHHhcCCcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCc
Confidence 4566777788763 2445555555555445777777543211 000 00011111222222223334
Q ss_pred ChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCcc----cccccc-ccccccccCCCCCcceeEeCC----
Q 008154 446 NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG----GLRDTV-ENFNPFAREGSGEGTGWSFLP---- 516 (576)
Q Consensus 446 ~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~g----g~~e~i-~~~~~~~~~~~~~~~G~~~~~---- 516 (576)
-+.. .+++.+++-++=+. +=..|.+||+++|+|.|+-... .+...+ .. -+.|..+..
T Consensus 347 ~Pq~--~vL~h~~v~~fvtH--gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~----------~G~g~~l~~~~~~ 412 (480)
T 2vch_A 347 APQA--QVLAHPSTGGFLTH--CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSED----------IRAALRPRAGDDG 412 (480)
T ss_dssp CCHH--HHHHSTTEEEEEEC--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHT----------TCCEECCCCCTTS
T ss_pred cCHH--HHhCCCCcCeEEec--ccchhHHHHHHcCCCEEeccccccchHHHHHHHHH----------hCeEEEeecccCC
Confidence 3332 68999996333322 2346889999999999996542 122222 22 355665543
Q ss_pred -CCHHHHHHHHHHHHH
Q 008154 517 -LSEESMLTALRFAIR 531 (576)
Q Consensus 517 -~d~~~la~~i~~~l~ 531 (576)
-+.++++++|.+++.
T Consensus 413 ~~~~~~l~~av~~vl~ 428 (480)
T 2vch_A 413 LVRREEVARVVKGLME 428 (480)
T ss_dssp CCCHHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHhc
Confidence 267888999988874
No 60
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=93.13 E-value=0.62 Score=46.43 Aligned_cols=119 Identities=13% Similarity=-0.001 Sum_probs=75.9
Q ss_pred HHHHcCCCCCCCCC-EEEEecccccccCH--HHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEcc-C
Q 008154 370 LQKELGLPIRPDCP-LIGFIGRLDYQKGI--DLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVG-F 445 (576)
Q Consensus 370 ~~~~~~i~~~~~~~-~i~~~Gr~~~~Kg~--~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~-~ 445 (576)
+.+..|++ ++.. +++..|.=.+.|.. +.+.+.+++|.+++.++++.|... ..+..+.+.+....+.+.+.+ .
T Consensus 175 ~l~~~g~~--~~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~--e~~~~~~i~~~~~~~~~~l~g~~ 250 (349)
T 3tov_A 175 FYSSHGLT--DTDILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPM--DLEMVQPVVEQMETKPIVATGKF 250 (349)
T ss_dssp HHHHTTCC--TTCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTT--THHHHHHHHHTCSSCCEECTTCC
T ss_pred HHHHcCCC--CCCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcc--hHHHHHHHHHhcccccEEeeCCC
Confidence 33455665 3334 44555543456665 578888888876678888887643 455555665544444444443 3
Q ss_pred ChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCcccccccccc
Q 008154 446 NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVEN 497 (576)
Q Consensus 446 ~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~ 497 (576)
+..+...+++.||++|-+ -.|..-+ |.|.|+|+|+--.+..+....+
T Consensus 251 sl~e~~ali~~a~~~i~~----DsG~~Hl-Aaa~g~P~v~lfg~t~p~~~~P 297 (349)
T 3tov_A 251 QLGPLAAAMNRCNLLITN----DSGPMHV-GISQGVPIVALYGPSNPFFYGP 297 (349)
T ss_dssp CHHHHHHHHHTCSEEEEE----SSHHHHH-HHTTTCCEEEECSSCCHHHHSC
T ss_pred CHHHHHHHHHhCCEEEEC----CCCHHHH-HHhcCCCEEEEECCCCccccCC
Confidence 556677899999999976 3566667 8999999999643333343433
No 61
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=92.20 E-value=0.65 Score=48.28 Aligned_cols=132 Identities=16% Similarity=0.160 Sum_probs=71.9
Q ss_pred CCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCC-hhh-HHHHHHHHHHhcCceEEEccCChhHHHHHHh--c
Q 008154 381 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGD-PQF-ESWMRDTEATYKDKYRGWVGFNVPISHRITA--G 456 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~--~ 456 (576)
...+++..|.....-+.+.+.+.+..|.+.+.+++++-... ... +...+.... ..+.. ..++-+.. .+++ .
T Consensus 276 ~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~l~~~~~~~~~~--~~~~~-v~~w~pq~--~vL~h~~ 350 (463)
T 2acv_A 276 KSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMEL--EGKGM-ICGWAPQV--EVLAHKA 350 (463)
T ss_dssp TCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCCGGGSCTTHHHHHHH--HCSEE-EESSCCHH--HHHHSTT
T ss_pred CceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCCcccCChhHHHhhcc--CCCEE-EEccCCHH--HHhCCCc
Confidence 44666777877622233444444444433467777654332 111 111122110 23433 33454432 4676 6
Q ss_pred CCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccc----cccc-cccccccccCCCCCcceeEe-C---C----CCHHHHH
Q 008154 457 CDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG----LRDT-VENFNPFAREGSGEGTGWSF-L---P----LSEESML 523 (576)
Q Consensus 457 ~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg----~~e~-i~~~~~~~~~~~~~~~G~~~-~---~----~d~~~la 523 (576)
+|++|.- +=..|.+||+++|+|.|+....+ +... +.. -+.|+.+ . . -+.+++.
T Consensus 351 ~~~fvth----~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~----------~g~g~~l~~~~~~~~~~~~~~~l~ 416 (463)
T 2acv_A 351 IGGFVSH----CGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKE----------WGVGLGLRVDYRKGSDVVAAEEIE 416 (463)
T ss_dssp EEEEEEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHT----------SCCEEESCSSCCTTCCCCCHHHHH
T ss_pred cCeEEec----CCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHH----------cCeEEEEecccCCCCccccHHHHH
Confidence 7778753 34578999999999999975421 1222 222 4567776 2 2 2678888
Q ss_pred HHHHHHHH
Q 008154 524 TALRFAIR 531 (576)
Q Consensus 524 ~~i~~~l~ 531 (576)
++|.++++
T Consensus 417 ~ai~~ll~ 424 (463)
T 2acv_A 417 KGLKDLMD 424 (463)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHHh
Confidence 88888874
No 62
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=91.42 E-value=0.22 Score=46.23 Aligned_cols=43 Identities=14% Similarity=0.116 Sum_probs=32.9
Q ss_pred EccCChhHHHHHHh-cCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCcc
Q 008154 442 WVGFNVPISHRITA-GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG 489 (576)
Q Consensus 442 ~~~~~~~~~~~ll~-~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~g 489 (576)
..+|.++ +..+++ .||++|.- +=..|++|++++|+|.|.....
T Consensus 118 v~~f~~~-m~~~l~~~AdlvIsh----aGagTv~Eal~~G~P~IvVP~~ 161 (224)
T 2jzc_A 118 GFDFSTK-MQSIIRDYSDLVISH----AGTGSILDSLRLNKPLIVCVND 161 (224)
T ss_dssp ECCSSSS-HHHHHHHHCSCEEES----SCHHHHHHHHHTTCCCCEECCS
T ss_pred Eeeccch-HHHHHHhcCCEEEEC----CcHHHHHHHHHhCCCEEEEcCc
Confidence 3366544 447899 99999954 4567999999999999997653
No 63
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=91.29 E-value=2.2 Score=44.47 Aligned_cols=133 Identities=8% Similarity=-0.082 Sum_probs=72.1
Q ss_pred CCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCCh---hhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcC
Q 008154 381 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDP---QFESWMRDTEATYKDKYRGWVGFNVPISHRITAGC 457 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 457 (576)
...++++.|.... ...+.+.+.+..|.+.+.+++++-..+. ......+...+....++. ..++-+.. .+++.+
T Consensus 295 ~~vv~vs~GS~~~-~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~-v~~~~pq~--~~L~h~ 370 (482)
T 2pq6_A 295 GSVVYVNFGSTTV-MTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGL-IASWCPQD--KVLNHP 370 (482)
T ss_dssp TCEEEEECCSSSC-CCHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEE-EESCCCHH--HHHTST
T ss_pred CceEEEecCCccc-CCHHHHHHHHHHHHhcCCcEEEEEcCCccccccccCcHhHHHhcCCCEE-EEeecCHH--HHhcCC
Confidence 3456666777653 2334444444444445678777643210 000001111222334443 34454433 488776
Q ss_pred CE--EEeCCCCCCCcHHHHHHHHcCCceEEeCccc----cccccc-cccccccCCCCCcceeEeCC-CCHHHHHHHHHHH
Q 008154 458 DI--LLMPSRFEPCGLNQLYAMRYGTIPVVHATGG----LRDTVE-NFNPFAREGSGEGTGWSFLP-LSEESMLTALRFA 529 (576)
Q Consensus 458 Dv--~v~ps~~E~~g~s~lEAma~G~pvIat~~gg----~~e~i~-~~~~~~~~~~~~~~G~~~~~-~d~~~la~~i~~~ 529 (576)
++ +|.- +=..|++||+++|+|.|+....+ +...+. . -+.|+.++. -+.+++.++|.++
T Consensus 371 ~~~~~vth----~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~----------~G~g~~l~~~~~~~~l~~~i~~l 436 (482)
T 2pq6_A 371 SIGGFLTH----CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNE----------WEIGMEIDTNVKREELAKLINEV 436 (482)
T ss_dssp TEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHT----------SCCEEECCSSCCHHHHHHHHHHH
T ss_pred CCCEEEec----CCcchHHHHHHcCCCEEecCcccchHHHHHHHHHH----------hCEEEEECCCCCHHHHHHHHHHH
Confidence 66 5532 34578999999999999975532 111121 1 356666652 2678888888888
Q ss_pred HH
Q 008154 530 IR 531 (576)
Q Consensus 530 l~ 531 (576)
+.
T Consensus 437 l~ 438 (482)
T 2pq6_A 437 IA 438 (482)
T ss_dssp HT
T ss_pred Hc
Confidence 74
No 64
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=90.42 E-value=1.5 Score=42.95 Aligned_cols=99 Identities=11% Similarity=0.046 Sum_probs=64.3
Q ss_pred CCCEEEEecccccccCHH--HHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCC
Q 008154 381 DCPLIGFIGRLDYQKGID--LIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCD 458 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~--~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~D 458 (576)
+..+++..|.=.+.|... .+.+.+++|.+++.++++.+.+ +...+..+.+.+... .+......+-.+...+++.||
T Consensus 178 ~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~-~~e~~~~~~i~~~~~-~~~l~g~~sl~el~ali~~a~ 255 (326)
T 2gt1_A 178 GEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGA-PHEEERAKRLAEGFA-YVEVLPKMSLEGVARVLAGAK 255 (326)
T ss_dssp TSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSS-HHHHHHHHHHHTTCT-TEEECCCCCHHHHHHHHHTCS
T ss_pred CCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCC-HHHHHHHHHHHhhCC-cccccCCCCHHHHHHHHHhCC
Confidence 334555556545566654 8888888887778888887434 333444555544332 232222335566678999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEe
Q 008154 459 ILLMPSRFEPCGLNQLYAMRYGTIPVVH 486 (576)
Q Consensus 459 v~v~ps~~E~~g~s~lEAma~G~pvIat 486 (576)
++|-+- .|..=+ |.|.|+|+|+-
T Consensus 256 l~I~~D----SG~~Hl-Aaa~g~P~v~l 278 (326)
T 2gt1_A 256 FVVSVD----TGLSHL-TAALDRPNITV 278 (326)
T ss_dssp EEEEES----SHHHHH-HHHTTCCEEEE
T ss_pred EEEecC----CcHHHH-HHHcCCCEEEE
Confidence 999773 566667 77899999985
No 65
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=86.29 E-value=5.1 Score=44.12 Aligned_cols=196 Identities=11% Similarity=0.026 Sum_probs=99.7
Q ss_pred HHhccceeccCccchhhhccccCCcchhhhhhccCCceeEecCCCCCCC--CCCCCCccccccCCcCCcccchHhHHHHH
Q 008154 294 IVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITE--WNPSSDEHIASHYSIDDLSGKVQCKIALQ 371 (576)
Q Consensus 294 ~~~ad~v~~vS~~~~~~~~~~~~~~~l~~~~~~~~~~i~vi~nGvd~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 371 (576)
....|.+++.|+...+.+. ..+..... .++.-|..-.. +... ......+.++
T Consensus 476 ~~~~D~~~~~s~~~~~~~~---------~~f~~~~~--~i~~~G~PR~D~l~~~~---------------~~~~~~~~~~ 529 (729)
T 3l7i_A 476 TSRWDYLISPNRYSTEIFR---------SAFWMDEE--RILEIGYPRNDVLVNRA---------------NDQEYLDEIR 529 (729)
T ss_dssp HTTCSEEEESSHHHHHHHH---------HHTCCCGG--GEEESCCGGGHHHHHST---------------TCHHHHHHHH
T ss_pred hccCCEEEeCCHHHHHHHH---------HHhCCCcc--eEEEcCCCchHHHhccc---------------chHHHHHHHH
Confidence 3457899999887665442 23333323 34455553211 1011 1122356778
Q ss_pred HHcCCCCCCCCCEEEEeccccccc----C-----HHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEE
Q 008154 372 KELGLPIRPDCPLIGFIGRLDYQK----G-----IDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGW 442 (576)
Q Consensus 372 ~~~~i~~~~~~~~i~~~Gr~~~~K----g-----~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~ 442 (576)
+.++++ +++.+|+|+-.+.... + ...-++.+.+....+..+++ ..||....... .......++..
T Consensus 530 ~~~~~~--~~kk~ILyaPT~r~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~li~--r~Hp~~~~~~~--~~~~~~~~~~~ 603 (729)
T 3l7i_A 530 THLNLP--SDKKVIMYAPTWRDDEFVSKGKYLFELKIDLDNLYKELGDDYVILL--RMHYLISNALD--LSGYENFAIDV 603 (729)
T ss_dssp HHTTCC--SSCEEEEECCCCCGGGCCGGGSSCCCCTTCHHHHHHHHTTTEEEEE--CCCHHHHTTCC--CTTCTTTEEEC
T ss_pred HHhCCC--CCCeEEEEeeeeeCCccccccccccchhhHHHHHHHHcCCCeEEEE--ecCcchhcccc--ccccCCcEEeC
Confidence 889987 6789999998766431 1 11223334333234555554 55553211100 01122334333
Q ss_pred ccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHH
Q 008154 443 VGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESM 522 (576)
Q Consensus 443 ~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~l 522 (576)
..+. ....++..+|++|- -++-++.|++..++|+|--..- ..+......+..-.......|-.+. +.+++
T Consensus 604 ~~~~--di~~ll~~aD~lIT-----DySSv~fD~~~l~kPiif~~~D-~~~Y~~~~rg~y~d~~~~~pg~~~~--~~~eL 673 (729)
T 3l7i_A 604 SNYN--DVSELFLISDCLIT-----DYSSVMFDYGILKRPQFFFAYD-IDKYDKGLRGFYMNYMEDLPGPIYT--EPYGL 673 (729)
T ss_dssp TTCS--CHHHHHHTCSEEEE-----SSCTHHHHHGGGCCCEEEECTT-TTTTTSSCCSBSSCTTSSSSSCEES--SHHHH
T ss_pred CCCc--CHHHHHHHhCEEEe-----echHHHHhHHhhCCCEEEecCC-HHHHhhccCCcccChhHhCCCCeEC--CHHHH
Confidence 3332 24578999999984 3555899999999999986321 1111110000000000012233332 78888
Q ss_pred HHHHHHHHH
Q 008154 523 LTALRFAIR 531 (576)
Q Consensus 523 a~~i~~~l~ 531 (576)
.++|.+...
T Consensus 674 ~~~i~~~~~ 682 (729)
T 3l7i_A 674 AKELKNLDK 682 (729)
T ss_dssp HHHHTTHHH
T ss_pred HHHHhhhhc
Confidence 888887754
No 66
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=68.87 E-value=4 Score=41.33 Aligned_cols=37 Identities=19% Similarity=0.273 Sum_probs=31.7
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
|||++++ .| .+|--.-+..++++|+++||+|+++++.
T Consensus 1 M~Il~~~---~~---~~GHv~P~l~la~~L~~~Gh~V~~~~~~ 37 (415)
T 1iir_A 1 MRVLLAT---CG---SRGDTEPLVALAVRVRDLGADVRMCAPP 37 (415)
T ss_dssp CEEEEEC---CS---CHHHHHHHHHHHHHHHHTTCEEEEEECG
T ss_pred CeEEEEc---CC---CchhHHHHHHHHHHHHHCCCeEEEEcCH
Confidence 7899985 24 5788888899999999999999999865
No 67
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=67.11 E-value=3.2 Score=42.45 Aligned_cols=39 Identities=26% Similarity=0.209 Sum_probs=31.5
Q ss_pred CCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 64 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 64 ~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
.+|||++++. | ++|--.-+..++++|+++||+|+++++.
T Consensus 19 ~~mrIl~~~~---~---~~GHv~p~l~la~~L~~~GheV~~~~~~ 57 (441)
T 2yjn_A 19 SHMRVVFSSM---A---SKSHLFGLVPLAWAFRAAGHEVRVVASP 57 (441)
T ss_dssp CCCEEEEECC---S---CHHHHTTTHHHHHHHHHTTCEEEEEECG
T ss_pred CccEEEEEcC---C---CcchHhHHHHHHHHHHHCCCeEEEEeCc
Confidence 4689999953 3 4566666789999999999999999864
No 68
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=66.50 E-value=6 Score=37.63 Aligned_cols=62 Identities=19% Similarity=0.082 Sum_probs=40.6
Q ss_pred HHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCC
Q 008154 451 HRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPL 517 (576)
Q Consensus 451 ~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~ 517 (576)
..++..+|++|.-+..+..--.+..++.+|+|+|....|+-.+.+....... ...++++.++
T Consensus 68 ~~ll~~~DVVIDfT~p~a~~~~~~~al~~G~~vVigTTG~s~~~~~~L~~aa-----~~~~vv~a~N 129 (272)
T 4f3y_A 68 ERVCAEADYLIDFTLPEGTLVHLDAALRHDVKLVIGTTGFSEPQKAQLRAAG-----EKIALVFSAN 129 (272)
T ss_dssp HHHHHHCSEEEECSCHHHHHHHHHHHHHHTCEEEECCCCCCHHHHHHHHHHT-----TTSEEEECSC
T ss_pred HHHhcCCCEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHh-----ccCCEEEECC
Confidence 3567899999987754544444567899999999988887555443211111 2466777664
No 69
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=65.59 E-value=4.8 Score=38.52 Aligned_cols=32 Identities=38% Similarity=0.536 Sum_probs=26.0
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~ 107 (576)
|||+.. ||.|..=..+++.|.++||+|++++-
T Consensus 1 MkILVT----------GatGfIG~~L~~~L~~~G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVG----------GGTGFIGTALTQLLNARGHEVTLVSR 32 (298)
T ss_dssp CEEEEE----------TTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEE----------CCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 777655 66666667889999999999999974
No 70
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=63.91 E-value=57 Score=26.44 Aligned_cols=110 Identities=4% Similarity=0.048 Sum_probs=66.8
Q ss_pred CcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHH--hcCCEEEeCCCC-CCCcHHHHHHHHc-----CCc
Q 008154 411 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRIT--AGCDILLMPSRF-EPCGLNQLYAMRY-----GTI 482 (576)
Q Consensus 411 ~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll--~~~Dv~v~ps~~-E~~g~s~lEAma~-----G~p 482 (576)
..+++++.+.+.........+.. ...++.... +...+...+ ...|++|.-... +.-|..+++.+.. .+|
T Consensus 8 ~~~iLivd~~~~~~~~l~~~L~~-~g~~v~~~~--~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~p 84 (147)
T 2zay_A 8 WWRIMLVDTQLPALAASISALSQ-EGFDIIQCG--NAIEAVPVAVKTHPHLIITEANMPKISGMDLFNSLKKNPQTASIP 84 (147)
T ss_dssp CEEEEEECTTGGGGHHHHHHHHH-HTEEEEEES--SHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHTSTTTTTSC
T ss_pred CceEEEEeCCHHHHHHHHHHHHH-cCCeEEEeC--CHHHHHHHHHcCCCCEEEEcCCCCCCCHHHHHHHHHcCcccCCCC
Confidence 56777887765444444444443 222333222 333333333 357888875543 4567888888764 577
Q ss_pred eEE-eCcccc---ccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHh
Q 008154 483 PVV-HATGGL---RDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTY 533 (576)
Q Consensus 483 vIa-t~~gg~---~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~ 533 (576)
+|. |..... .+.+.. |..+++..|-+.+++.+.|..++...
T Consensus 85 ii~ls~~~~~~~~~~~~~~----------g~~~~l~kp~~~~~L~~~i~~~~~~~ 129 (147)
T 2zay_A 85 VIALSGRATAKEEAQLLDM----------GFIDFIAKPVNAIRLSARIKRVLKLL 129 (147)
T ss_dssp EEEEESSCCHHHHHHHHHH----------TCSEEEESSCCHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHhC----------CCCEEEeCCCCHHHHHHHHHHHHHHH
Confidence 776 333322 222333 77899999999999999999988643
No 71
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=60.59 E-value=7.2 Score=37.38 Aligned_cols=62 Identities=18% Similarity=0.052 Sum_probs=39.0
Q ss_pred HHHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCC
Q 008154 451 HRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPL 517 (576)
Q Consensus 451 ~~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~ 517 (576)
..++..+|++|--+..+..--.+..++.+|+|+|+...|+-.+......... ...++++.|+
T Consensus 83 ~~ll~~aDVvIDFT~p~a~~~~~~~~l~~Gv~vViGTTG~~~e~~~~L~~aa-----~~~~~~~a~N 144 (288)
T 3ijp_A 83 ESAFSNTEGILDFSQPQASVLYANYAAQKSLIHIIGTTGFSKTEEAQIADFA-----KYTTIVKSGN 144 (288)
T ss_dssp HHHTTSCSEEEECSCHHHHHHHHHHHHHHTCEEEECCCCCCHHHHHHHHHHH-----TTSEEEECSC
T ss_pred HHHhcCCCEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHh-----CcCCEEEECC
Confidence 3577899999976654433333466889999999988886554433211111 2466777664
No 72
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=59.93 E-value=14 Score=31.16 Aligned_cols=39 Identities=21% Similarity=0.168 Sum_probs=31.9
Q ss_pred CceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcE-EEEE
Q 008154 65 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRV-MVVS 106 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V-~vi~ 106 (576)
.||++++... .| +..-....+.++|+++.+.||+| .|+-
T Consensus 12 ~~~~~ivv~~-~P--yg~~~a~~Al~~A~aala~g~eV~~VFf 51 (140)
T 2d1p_A 12 SMRFAIVVTG-PA--YGTQQASSAFQFAQALIADGHELSSVFF 51 (140)
T ss_dssp CCEEEEEECS-CS--SSSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred ceEEEEEEcC-CC--CCcHHHHHHHHHHHHHHHCCCccCEEEE
Confidence 5899999876 45 35667888899999999999999 6664
No 73
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=58.71 E-value=99 Score=27.45 Aligned_cols=74 Identities=14% Similarity=0.090 Sum_probs=42.4
Q ss_pred HHHhcCCEEEeCCCCCCCcH--HHHHHHHcCCceEEeC-ccccccccccccccc-cCCCCCcceeEeCCCCHHHHHHHHH
Q 008154 452 RITAGCDILLMPSRFEPCGL--NQLYAMRYGTIPVVHA-TGGLRDTVENFNPFA-REGSGEGTGWSFLPLSEESMLTALR 527 (576)
Q Consensus 452 ~ll~~~Dv~v~ps~~E~~g~--s~lEAma~G~pvIat~-~gg~~e~i~~~~~~~-~~~~~~~~G~~~~~~d~~~la~~i~ 527 (576)
-++..+|.+|.-+ -++|+ .+.||+..|+||++-+ .|.|.+.+...-.+. -.......-+.+ .+|++++.+.|.
T Consensus 114 ~m~~~sda~Ivlp--GG~GTL~E~~eal~~~kPV~lln~~g~w~~~l~~~~~~G~fi~~~~~~~i~~-~~~~ee~~~~l~ 190 (195)
T 1rcu_A 114 VLLRNADVVVSIG--GEIGTAIEILGAYALGKPVILLRGTGGWTDRISQVLIDGKYLDNRRIVEIHQ-AWTVEEAVQIIE 190 (195)
T ss_dssp HHHTTCSEEEEES--CCHHHHHHHHHHHHTTCCEEEETTSCHHHHHGGGGCBTTTBSSTTCCSCEEE-ESSHHHHHHHHH
T ss_pred HHHHhCCEEEEec--CCCcHHHHHHHHHhcCCCEEEECCCCccHHHHHHHHHcCCcCCHHHcCeEEE-eCCHHHHHHHHH
Confidence 4567899988754 24554 3588999999999986 566665553311100 000011222333 347887766655
Q ss_pred H
Q 008154 528 F 528 (576)
Q Consensus 528 ~ 528 (576)
+
T Consensus 191 ~ 191 (195)
T 1rcu_A 191 Q 191 (195)
T ss_dssp T
T ss_pred H
Confidence 3
No 74
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=57.32 E-value=16 Score=30.10 Aligned_cols=38 Identities=21% Similarity=0.321 Sum_probs=30.0
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcE-EEEE
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRV-MVVS 106 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V-~vi~ 106 (576)
||++++... .|+ ..-....+.+++.++.+.||+| .++-
T Consensus 1 mk~~iiv~~-~p~--~~~~~~~al~~a~a~~~~g~~v~~vff 39 (130)
T 2hy5_A 1 MKFALQINE-GPY--QHQASDSAYQFAKAALEKGHEIFRVFF 39 (130)
T ss_dssp CEEEEEECS-CTT--TSTHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CEEEEEEeC-CCC--CcHHHHHHHHHHHHHHhcCCeeCEEEE
Confidence 678888765 453 4567788899999999999999 7774
No 75
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=53.61 E-value=80 Score=25.96 Aligned_cols=110 Identities=6% Similarity=0.012 Sum_probs=65.2
Q ss_pred CcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHh--cCCEEEeCCCC-CCCcHHHHHHHH-----cCCc
Q 008154 411 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSRF-EPCGLNQLYAMR-----YGTI 482 (576)
Q Consensus 411 ~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~--~~Dv~v~ps~~-E~~g~s~lEAma-----~G~p 482 (576)
+.+++|+.+.+ ......+.+-+.....+.... +.+.+...+. ..|+++.-... +.-|..+++.+. ..+|
T Consensus 7 ~~~ILivdd~~-~~~~~l~~~L~~~g~~v~~~~--~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~p 83 (154)
T 3gt7_A 7 AGEILIVEDSP-TQAEHLKHILEETGYQTEHVR--NGREAVRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIP 83 (154)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHHTTTCEEEEES--SHHHHHHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSC
T ss_pred CCcEEEEeCCH-HHHHHHHHHHHHCCCEEEEeC--CHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCC
Confidence 56777777753 333333333222222333222 4444444543 46888876543 456788887775 3567
Q ss_pred eEEe-Cccc---cccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHh
Q 008154 483 PVVH-ATGG---LRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTY 533 (576)
Q Consensus 483 vIat-~~gg---~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~ 533 (576)
+|.. .... ..+.+.. |..+++..|-+.+++.+.|..++...
T Consensus 84 ii~~s~~~~~~~~~~~~~~----------g~~~~l~KP~~~~~l~~~i~~~l~~~ 128 (154)
T 3gt7_A 84 VILLTILSDPRDVVRSLEC----------GADDFITKPCKDVVLASHVKRLLSGV 128 (154)
T ss_dssp EEEEECCCSHHHHHHHHHH----------CCSEEEESSCCHHHHHHHHHHHHHHT
T ss_pred EEEEECCCChHHHHHHHHC----------CCCEEEeCCCCHHHHHHHHHHHHHHH
Confidence 7763 3222 2233333 78899999999999999999998744
No 76
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=53.29 E-value=86 Score=25.09 Aligned_cols=67 Identities=7% Similarity=0.173 Sum_probs=41.2
Q ss_pred hcCCEEEeCCCC-CCCcHHHHHHHH-----cCCceEEe-Ccccc---ccccccccccccCCCCCcceeEeCCCCHHHHHH
Q 008154 455 AGCDILLMPSRF-EPCGLNQLYAMR-----YGTIPVVH-ATGGL---RDTVENFNPFAREGSGEGTGWSFLPLSEESMLT 524 (576)
Q Consensus 455 ~~~Dv~v~ps~~-E~~g~s~lEAma-----~G~pvIat-~~gg~---~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~ 524 (576)
...|+++.-... +.-|..+++.+. ..+|+|.. ..... .+.+.. |..+++..|-+.+++.+
T Consensus 45 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~----------g~~~~l~KP~~~~~l~~ 114 (140)
T 3n53_A 45 HHPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLILLFSSEHKEAIVNGLHS----------GADDYLTKPFNRNDLLS 114 (140)
T ss_dssp HCCSEEEEETTC------CHHHHHHTSTTCTTCCEEEEECC----CTTTTTTC----------CCSEEEESSCCHHHHHH
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCEEEEecCCCHHHHHHHHhc----------CCCeeeeCCCCHHHHHH
Confidence 357888875543 345666666665 46777763 32222 222333 78899999999999999
Q ss_pred HHHHHHH
Q 008154 525 ALRFAIR 531 (576)
Q Consensus 525 ~i~~~l~ 531 (576)
+|..++.
T Consensus 115 ~i~~~~~ 121 (140)
T 3n53_A 115 RIEIHLR 121 (140)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998875
No 77
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=52.39 E-value=37 Score=30.84 Aligned_cols=39 Identities=18% Similarity=0.167 Sum_probs=25.4
Q ss_pred ccCCCceEEEEeeccCCccccCcHHHHHhhHHHHHHh-CCCcEEEEEec
Q 008154 61 QTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAA-RGHRVMVVSPR 108 (576)
Q Consensus 61 ~~~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~-~G~~V~vi~~~ 108 (576)
|..++|||+++. +|-|.-+..+..+..+ .+++|..|..+
T Consensus 1 ~~~~~~riavl~---------SG~Gsnl~all~~~~~~~~~eI~~Vis~ 40 (215)
T 3tqr_A 1 MNREPLPIVVLI---------SGNGTNLQAIIGAIQKGLAIEIRAVISN 40 (215)
T ss_dssp ---CCEEEEEEE---------SSCCHHHHHHHHHHHTTCSEEEEEEEES
T ss_pred CCCCCcEEEEEE---------eCCcHHHHHHHHHHHcCCCCEEEEEEeC
Confidence 345678999883 4456667778887766 46777777654
No 78
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=51.76 E-value=82 Score=25.89 Aligned_cols=114 Identities=8% Similarity=0.084 Sum_probs=66.2
Q ss_pred cCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHh--cCCEEEeCCCC-CCCcHHHHHHHH-----cC
Q 008154 409 ADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSRF-EPCGLNQLYAMR-----YG 480 (576)
Q Consensus 409 ~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~--~~Dv~v~ps~~-E~~g~s~lEAma-----~G 480 (576)
++++++.|+-+. +......+.+-+...-..+. ...+...+..+++ ..|+.+.=-.. +--|+.+++.+- ..
T Consensus 10 ~k~~rILiVDD~-~~~r~~l~~~L~~~G~~~v~-~a~~g~~al~~~~~~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ 87 (134)
T 3to5_A 10 NKNMKILIVDDF-STMRRIVKNLLRDLGFNNTQ-EADDGLTALPMLKKGDFDFVVTDWNMPGMQGIDLLKNIRADEELKH 87 (134)
T ss_dssp CTTCCEEEECSC-HHHHHHHHHHHHHTTCCCEE-EESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTTTTT
T ss_pred CCCCEEEEEeCC-HHHHHHHHHHHHHcCCcEEE-EECCHHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCC
Confidence 356777777665 33444444443333333222 1124444444443 57888764432 456888888774 46
Q ss_pred CceEE-eCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHH
Q 008154 481 TIPVV-HATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 481 ~pvIa-t~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
+|||. |..+...+...-. +.|.++++..|-+++++.+.|.++++
T Consensus 88 ipvI~lTa~~~~~~~~~~~-------~~Ga~~yl~KP~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 88 LPVLMITAEAKREQIIEAA-------QAGVNGYIVKPFTAATLKEKLDKIFE 132 (134)
T ss_dssp CCEEEEESSCCHHHHHHHH-------HTTCCEEEESSCCHHHHHHHHHHHCC
T ss_pred CeEEEEECCCCHHHHHHHH-------HCCCCEEEECCCCHHHHHHHHHHHHh
Confidence 78887 4444333322211 12789999999999999998888753
No 79
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=51.63 E-value=13 Score=38.45 Aligned_cols=38 Identities=21% Similarity=0.269 Sum_probs=32.3
Q ss_pred CceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 65 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
+++|+++. +| ..|--.-+..+|+.|+++||+|+++++.
T Consensus 8 ~~~vl~~p---~p---~~GHi~P~l~La~~L~~rG~~VT~v~t~ 45 (482)
T 2pq6_A 8 KPHVVMIP---YP---VQGHINPLFKLAKLLHLRGFHITFVNTE 45 (482)
T ss_dssp CCEEEEEC---CS---SHHHHHHHHHHHHHHHHTTCEEEEEEEH
T ss_pred CCEEEEec---Cc---cchhHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 46899996 35 4778888999999999999999999865
No 80
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=48.23 E-value=13 Score=38.43 Aligned_cols=40 Identities=15% Similarity=0.054 Sum_probs=32.0
Q ss_pred CCceEEEEeeccCCccccCcHHHHHhhHHHHHHhC-CCcEEEEEecC
Q 008154 64 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR-GHRVMVVSPRY 109 (576)
Q Consensus 64 ~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~-G~~V~vi~~~~ 109 (576)
++++|++++ +| ..|--.-+..+++.|+++ ||+|+++++..
T Consensus 5 ~~~~vl~~p---~p---~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~ 45 (480)
T 2vch_A 5 KTPHVAIIP---SP---GMGHLIPLVEFAKRLVHLHGLTVTFVIAGE 45 (480)
T ss_dssp -CCEEEEEC---CS---CHHHHHHHHHHHHHHHHHHCCEEEEEECCS
T ss_pred CCcEEEEec---Cc---chhHHHHHHHHHHHHHhCCCCEEEEEECCC
Confidence 347899885 34 467777889999999998 99999998754
No 81
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=47.91 E-value=62 Score=26.24 Aligned_cols=110 Identities=15% Similarity=0.116 Sum_probs=59.2
Q ss_pred CcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHH---hcCCEEEeCCCC-CCCcHHHHHHHHc---CCce
Q 008154 411 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRIT---AGCDILLMPSRF-EPCGLNQLYAMRY---GTIP 483 (576)
Q Consensus 411 ~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll---~~~Dv~v~ps~~-E~~g~s~lEAma~---G~pv 483 (576)
..+++|+.+...........+.......+....+. .+.+..+. ...|++|.-... +.-|+.+++.+.. .+|+
T Consensus 20 ~~~ilivdd~~~~~~~l~~~L~~~g~~~v~~~~~~-~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~i 98 (146)
T 4dad_A 20 MINILVASEDASRLAHLARLVGDAGRYRVTRTVGR-AAQIVQRTDGLDAFDILMIDGAALDTAELAAIEKLSRLHPGLTC 98 (146)
T ss_dssp GCEEEEECSCHHHHHHHHHHHHHHCSCEEEEECCC-HHHHTTCHHHHTTCSEEEEECTTCCHHHHHHHHHHHHHCTTCEE
T ss_pred CCeEEEEeCCHHHHHHHHHHHhhCCCeEEEEeCCH-HHHHHHHHhcCCCCCEEEEeCCCCCccHHHHHHHHHHhCCCCcE
Confidence 45666666653222233333332211344433322 22222232 457888875443 3345556555443 5677
Q ss_pred EEe-Ccccc---ccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHH
Q 008154 484 VVH-ATGGL---RDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 484 Iat-~~gg~---~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
|.. ..... .+.+.. |..+++..|-+.+++..+|..++.
T Consensus 99 i~lt~~~~~~~~~~~~~~----------ga~~~l~Kp~~~~~L~~~i~~~~~ 140 (146)
T 4dad_A 99 LLVTTDASSQTLLDAMRA----------GVRDVLRWPLEPRALDDALKRAAA 140 (146)
T ss_dssp EEEESCCCHHHHHHHHTT----------TEEEEEESSCCHHHHHHHHHHHHH
T ss_pred EEEeCCCCHHHHHHHHHh----------CCceeEcCCCCHHHHHHHHHHHHh
Confidence 763 33222 223333 788999999999999999988875
No 82
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=47.36 E-value=32 Score=28.98 Aligned_cols=42 Identities=19% Similarity=0.135 Sum_probs=30.4
Q ss_pred cCCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEe
Q 008154 62 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 62 ~~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~ 107 (576)
++..||++++-. ||. .--....+..++..|.++|++|+|-+-
T Consensus 3 ~~~~m~~LilLG--CPE--~Pvq~p~~lYl~~~Lk~~G~~v~VA~n 44 (157)
T 1kjn_A 3 TESTGKALMVLG--CPE--SPVQIPLAIYTSHKLKKKGFRVTVTAN 44 (157)
T ss_dssp ---CCEEEEECC--CSC--STTHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccceeeeEEec--CCC--CcchhhHHHHHHHHHHhcCCeeEEecC
Confidence 345699888765 563 344667778888999999999999973
No 83
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=46.99 E-value=16 Score=34.17 Aligned_cols=41 Identities=17% Similarity=0.143 Sum_probs=28.2
Q ss_pred CCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCC
Q 008154 63 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFN 111 (576)
Q Consensus 63 ~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~ 111 (576)
.++|||+..+.... ...-+..|+++|++ +|+|+|++|...+
T Consensus 9 ~~~m~ILlTNDDGi-------~apGi~aL~~~l~~-~~~V~VVAP~~~~ 49 (261)
T 3ty2_A 9 TPKLRLLLSNDDGV-------YAKGLAILAKTLAD-LGEVDVVAPDRNR 49 (261)
T ss_dssp --CCEEEEECSSCT-------TCHHHHHHHHHHTT-TSEEEEEEESSCC
T ss_pred CCCCeEEEEcCCCC-------CCHHHHHHHHHHHh-cCCEEEEecCCCC
Confidence 45699998876532 12235667788877 7899999998655
No 84
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=45.26 E-value=1.1e+02 Score=24.23 Aligned_cols=110 Identities=10% Similarity=0.064 Sum_probs=65.1
Q ss_pred CcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHH--hcCCEEEeCCCC-CCCcHHHHHHHHc-----CCc
Q 008154 411 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRIT--AGCDILLMPSRF-EPCGLNQLYAMRY-----GTI 482 (576)
Q Consensus 411 ~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll--~~~Dv~v~ps~~-E~~g~s~lEAma~-----G~p 482 (576)
..+++|+.+.+ ......+.+-+.....+.... +.+.+...+ ...|+++.-... +.-|..+++.+.. .+|
T Consensus 6 ~~~iLivdd~~-~~~~~l~~~l~~~g~~v~~~~--~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ 82 (140)
T 3grc_A 6 RPRILICEDDP-DIARLLNLMLEKGGFDSDMVH--SAAQALEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLA 82 (140)
T ss_dssp CSEEEEECSCH-HHHHHHHHHHHHTTCEEEEEC--SHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCE
T ss_pred CCCEEEEcCCH-HHHHHHHHHHHHCCCeEEEEC--CHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCC
Confidence 45677777653 333333333223333333222 333333343 356888876553 4668888887765 678
Q ss_pred eEEeCccccc-----cccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHh
Q 008154 483 PVVHATGGLR-----DTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTY 533 (576)
Q Consensus 483 vIat~~gg~~-----e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~ 533 (576)
+|......-. +.+.. |..+++..|-+.+++.++|..++...
T Consensus 83 ii~~s~~~~~~~~~~~~~~~----------g~~~~l~kP~~~~~l~~~i~~~l~~~ 128 (140)
T 3grc_A 83 IVVVSANAREGELEFNSQPL----------AVSTWLEKPIDENLLILSLHRAIDNM 128 (140)
T ss_dssp EEEECTTHHHHHHHHCCTTT----------CCCEEECSSCCHHHHHHHHHHHHHHH
T ss_pred EEEEecCCChHHHHHHhhhc----------CCCEEEeCCCCHHHHHHHHHHHHHhc
Confidence 7774332221 22333 78899999999999999999998743
No 85
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=44.32 E-value=1.2e+02 Score=24.26 Aligned_cols=112 Identities=7% Similarity=-0.029 Sum_probs=65.5
Q ss_pred CcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHh--cCCEEEeCCCC-CCCcHHHHHHHHc-----CCc
Q 008154 411 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSRF-EPCGLNQLYAMRY-----GTI 482 (576)
Q Consensus 411 ~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~--~~Dv~v~ps~~-E~~g~s~lEAma~-----G~p 482 (576)
+.+++|+.+.. ......+.+-+..........-.+.+.+...+. ..|+++.-... +.-|..+++.+.. ++|
T Consensus 5 ~~~ILivdd~~-~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~p 83 (144)
T 3kht_A 5 SKRVLVVEDNP-DDIALIRRVLDRKDIHCQLEFVDNGAKALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTP 83 (144)
T ss_dssp CEEEEEECCCH-HHHHHHHHHHHHTTCCEEEEEESSHHHHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCC
T ss_pred CCEEEEEeCCH-HHHHHHHHHHHhcCCCeeEEEECCHHHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCC
Confidence 45677777653 333333333333333311122224444444443 46888876543 4567888887765 577
Q ss_pred eEEeC-cccc---ccccccccccccCCCCCcceeEeCCC-CHHHHHHHHHHHHHHh
Q 008154 483 PVVHA-TGGL---RDTVENFNPFAREGSGEGTGWSFLPL-SEESMLTALRFAIRTY 533 (576)
Q Consensus 483 vIat~-~gg~---~e~i~~~~~~~~~~~~~~~G~~~~~~-d~~~la~~i~~~l~~~ 533 (576)
+|... .... .+.+.. |..+++..|. +.+++.++|..++..+
T Consensus 84 ii~~s~~~~~~~~~~~~~~----------ga~~~l~Kp~~~~~~l~~~i~~~l~~~ 129 (144)
T 3kht_A 84 IVILTDNVSDDRAKQCMAA----------GASSVVDKSSNNVTDFYGRIYAIFSYW 129 (144)
T ss_dssp EEEEETTCCHHHHHHHHHT----------TCSEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHc----------CCCEEEECCCCcHHHHHHHHHHHHHHH
Confidence 77743 2222 223333 7889999999 9999999999998744
No 86
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=44.24 E-value=46 Score=26.45 Aligned_cols=43 Identities=14% Similarity=0.178 Sum_probs=29.5
Q ss_pred CCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCC
Q 008154 63 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFN 111 (576)
Q Consensus 63 ~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~ 111 (576)
.++|||+.+|.. ....+.++..+-+++.++|.+|.+.+-.+..
T Consensus 4 ~~~mkIlL~C~a------GmSTsllv~km~~~a~~~gi~v~i~a~~~~~ 46 (108)
T 3nbm_A 4 SKELKVLVLCAG------SGTSAQLANAINEGANLTEVRVIANSGAYGA 46 (108)
T ss_dssp -CCEEEEEEESS------SSHHHHHHHHHHHHHHHHTCSEEEEEEETTS
T ss_pred ccCceEEEECCC------CCCHHHHHHHHHHHHHHCCCceEEEEcchHH
Confidence 467999999862 1334455666666777799999998755544
No 87
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=43.43 E-value=1.2e+02 Score=23.83 Aligned_cols=110 Identities=7% Similarity=-0.054 Sum_probs=60.7
Q ss_pred cEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHH--hcCCEEEeCCC-CCCCcHHHHHHHHc-----CCce
Q 008154 412 IQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRIT--AGCDILLMPSR-FEPCGLNQLYAMRY-----GTIP 483 (576)
Q Consensus 412 ~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll--~~~Dv~v~ps~-~E~~g~s~lEAma~-----G~pv 483 (576)
.+++|+.+.+ ......+.+-+ ...++... .+...+...+ ...|+++.-.. .+.-|..+++.+.. .+|+
T Consensus 5 ~~ilivdd~~-~~~~~l~~~l~-~~~~v~~~--~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pi 80 (133)
T 3nhm_A 5 PKVLIVENSW-TMRETLRLLLS-GEFDCTTA--ADGASGLQQALAHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPV 80 (133)
T ss_dssp CEEEEECSCH-HHHHHHHHHHT-TTSEEEEE--SSHHHHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCE
T ss_pred CEEEEEcCCH-HHHHHHHHHHh-CCcEEEEE--CCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCE
Confidence 4666776653 23333332222 22233222 2333333344 35788887554 34667888777665 6777
Q ss_pred EEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHH
Q 008154 484 VVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRT 532 (576)
Q Consensus 484 Iat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~ 532 (576)
|......-.+.... .+.|..+++..|-+.+++.+.|..++..
T Consensus 81 i~~s~~~~~~~~~~-------~~~g~~~~l~KP~~~~~l~~~i~~~l~~ 122 (133)
T 3nhm_A 81 IFVSGYAPRTEGPA-------DQPVPDAYLVKPVKPPVLIAQLHALLAR 122 (133)
T ss_dssp EEEESCCC-----T-------TSCCCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred EEEeCCCcHhHHHH-------hhcCCceEEeccCCHHHHHHHHHHHHhh
Confidence 76322111121111 1127788999999999999999999874
No 88
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=43.17 E-value=29 Score=32.98 Aligned_cols=40 Identities=25% Similarity=0.291 Sum_probs=28.8
Q ss_pred CCceEEEEeeccCCccccCcH-HHHHhhHHHHHHhCCCcEEEEEe
Q 008154 64 VSYNIVFVTAEAAPYSKTGGL-GDVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 64 ~~mkI~~~s~e~~P~~~~GG~-~~~~~~la~~l~~~G~~V~vi~~ 107 (576)
+.|||++|.. .|. .++. ..++....++|.+.||+|.++-+
T Consensus 21 ~~MKiLII~a--HP~--~~S~n~aL~~~~~~~l~~~G~eV~v~DL 61 (280)
T 4gi5_A 21 QSMKVLLIYA--HPE--PRSLNGALKNFAIRHLQQAGHEVQVSDL 61 (280)
T ss_dssp -CCEEEEEEC--CSC--TTSHHHHHHHHHHHHHHHTTCEEEEEET
T ss_pred hCCeEEEEEe--CCC--CccHHHHHHHHHHHHHHHCCCeEEEEEc
Confidence 5699999987 463 3443 44556677888899999999854
No 89
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=42.11 E-value=89 Score=24.99 Aligned_cols=108 Identities=12% Similarity=0.119 Sum_probs=62.4
Q ss_pred CcEEEEEeCCChhhHHHHHHHHHH-hcCceEEEccCChhHHHHHHh---cCCEEEeCCCCC--CCcHHHHHHHHc-----
Q 008154 411 DIQFVMLGSGDPQFESWMRDTEAT-YKDKYRGWVGFNVPISHRITA---GCDILLMPSRFE--PCGLNQLYAMRY----- 479 (576)
Q Consensus 411 ~~~lii~G~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~---~~Dv~v~ps~~E--~~g~s~lEAma~----- 479 (576)
..+++|+.+.+ ......+.+-+. ...++.... +...+...+. ..|++|.-.... .-|..+++.+..
T Consensus 4 ~~~ilivdd~~-~~~~~l~~~L~~~~~~~v~~~~--~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ 80 (140)
T 3lua_A 4 DGTVLLIDYFE-YEREKTKIIFDNIGEYDFIEVE--NLKKFYSIFKDLDSITLIIMDIAFPVEKEGLEVLSAIRNNSRTA 80 (140)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHHHHCCCEEEEEC--SHHHHHTTTTTCCCCSEEEECSCSSSHHHHHHHHHHHHHSGGGT
T ss_pred CCeEEEEeCCH-HHHHHHHHHHHhccCccEEEEC--CHHHHHHHHhcCCCCcEEEEeCCCCCCCcHHHHHHHHHhCcccC
Confidence 35677777653 333333333233 333444222 3444444443 478888765432 346666666554
Q ss_pred CCceEEe-Ccccc---ccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHH
Q 008154 480 GTIPVVH-ATGGL---RDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 480 G~pvIat-~~gg~---~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
.+|+|.. ..... .+.+.. |..+++..|-+.+++.++|..++.
T Consensus 81 ~~~ii~ls~~~~~~~~~~~~~~----------g~~~~l~KP~~~~~l~~~i~~~~~ 126 (140)
T 3lua_A 81 NTPVIIATKSDNPGYRHAALKF----------KVSDYILKPYPTKRLENSVRSVLK 126 (140)
T ss_dssp TCCEEEEESCCCHHHHHHHHHS----------CCSEEEESSCCTTHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCHHHHHHHHHc----------CCCEEEECCCCHHHHHHHHHHHHH
Confidence 6788773 33222 233333 788999999999999999988875
No 90
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=41.90 E-value=1.3e+02 Score=23.97 Aligned_cols=109 Identities=14% Similarity=0.133 Sum_probs=63.8
Q ss_pred CcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHh---cCCEEEeCCCC-C-CCcHHHHHHHH--cCCce
Q 008154 411 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA---GCDILLMPSRF-E-PCGLNQLYAMR--YGTIP 483 (576)
Q Consensus 411 ~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~---~~Dv~v~ps~~-E-~~g~s~lEAma--~G~pv 483 (576)
+.+++|+.+.+ ......+.+-+.....+.... +...+...+. ..|+++.-... + .-|..+++.+. ..+|+
T Consensus 5 ~~~ilivdd~~-~~~~~l~~~L~~~g~~v~~~~--~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~i 81 (140)
T 3h5i_A 5 DKKILIVEDSK-FQAKTIANILNKYGYTVEIAL--TGEAAVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQISELPV 81 (140)
T ss_dssp -CEEEEECSCH-HHHHHHHHHHHHTTCEEEEES--SHHHHHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHHCCCCE
T ss_pred CcEEEEEeCCH-HHHHHHHHHHHHcCCEEEEec--ChHHHHHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhCCCCCE
Confidence 45677777653 333333333333333443222 3444444453 46888876554 3 56777776655 37787
Q ss_pred EEe-Cccc---cccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHH
Q 008154 484 VVH-ATGG---LRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRT 532 (576)
Q Consensus 484 Iat-~~gg---~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~ 532 (576)
|.. .... ..+.+.. |..+++..|-+.+++.+.|..++..
T Consensus 82 i~ls~~~~~~~~~~~~~~----------g~~~~l~KP~~~~~l~~~i~~~l~~ 124 (140)
T 3h5i_A 82 VFLTAHTEPAVVEKIRSV----------TAYGYVMKSATEQVLITIVEMALRL 124 (140)
T ss_dssp EEEESSSSCCCCGGGGGS----------CEEEEEETTCCHHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHhC----------CCcEEEeCCCCHHHHHHHHHHHHHH
Confidence 773 3222 2233333 7889999999999999999988763
No 91
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=40.62 E-value=1.2e+02 Score=22.94 Aligned_cols=104 Identities=14% Similarity=0.010 Sum_probs=56.8
Q ss_pred EEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHH--hcCCEEEeCCCC-CCCcHHHHHHHH-----cCCceE
Q 008154 413 QFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRIT--AGCDILLMPSRF-EPCGLNQLYAMR-----YGTIPV 484 (576)
Q Consensus 413 ~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll--~~~Dv~v~ps~~-E~~g~s~lEAma-----~G~pvI 484 (576)
+++++.+.+.......+.+. ....++.... +.+.+...+ ...|+++.-... +.-|...++.+. ..+|+|
T Consensus 3 ~iliv~~~~~~~~~l~~~l~-~~g~~v~~~~--~~~~~~~~l~~~~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii 79 (119)
T 2j48_A 3 HILLLEEEDEAATVVCEMLT-AAGFKVIWLV--DGSTALDQLDLLQPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLV 79 (119)
T ss_dssp EEEEECCCHHHHHHHHHHHH-HTTCEEEEES--CHHHHHHHHHHHCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCE
T ss_pred EEEEEeCCHHHHHHHHHHHH-hCCcEEEEec--CHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEE
Confidence 56666665332233333333 3333443322 333333333 357888765443 456777777775 456777
Q ss_pred E-eCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHH
Q 008154 485 V-HATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFA 529 (576)
Q Consensus 485 a-t~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~ 529 (576)
. +......+.... |..+++..|-+.+++.+.+..+
T Consensus 80 ~~~~~~~~~~~~~~----------g~~~~l~kp~~~~~l~~~l~~~ 115 (119)
T 2j48_A 80 LFLGEPPVDPLLTA----------QASAILSKPLDPQLLLTTLQGL 115 (119)
T ss_dssp EEESSCCSSHHHHH----------HCSEECSSCSTTHHHHHHHHTT
T ss_pred EEeCCCCchhhhhc----------CHHHhccCCCCHHHHHHHHHHH
Confidence 6 333222233443 6778888888888887777654
No 92
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=40.51 E-value=1.4e+02 Score=23.76 Aligned_cols=111 Identities=8% Similarity=-0.026 Sum_probs=63.9
Q ss_pred CCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHh--cCCEEEeCCCC-CCCcHHHHHHHHc-----CC
Q 008154 410 DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSRF-EPCGLNQLYAMRY-----GT 481 (576)
Q Consensus 410 ~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~--~~Dv~v~ps~~-E~~g~s~lEAma~-----G~ 481 (576)
...+++++.+.+.........+. ....++.... +.+.+...+. ..|+++.-... +.-|..+++.+.. .+
T Consensus 6 ~~~~iLivdd~~~~~~~l~~~L~-~~g~~v~~~~--~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~ 82 (142)
T 3cg4_A 6 HKGDVMIVDDDAHVRIAVKTILS-DAGFHIISAD--SGGQCIDLLKKGFSGVVLLDIMMPGMDGWDTIRAILDNSLEQGI 82 (142)
T ss_dssp CCCEEEEECSCHHHHHHHHHHHH-HTTCEEEEES--SHHHHHHHHHTCCCEEEEEESCCSSSCHHHHHHHHHHTTCCTTE
T ss_pred CCCeEEEEcCCHHHHHHHHHHHH-HCCeEEEEeC--CHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCC
Confidence 35677777776432233333333 2233333222 3333334443 46787765443 4567788887764 46
Q ss_pred ceEE-eCccc---cccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHh
Q 008154 482 IPVV-HATGG---LRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTY 533 (576)
Q Consensus 482 pvIa-t~~gg---~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~ 533 (576)
|+|. +.... ..+.+.. |..+++..|-+.+++.+.|..++...
T Consensus 83 pii~~s~~~~~~~~~~~~~~----------g~~~~l~kp~~~~~l~~~i~~~~~~~ 128 (142)
T 3cg4_A 83 AIVMLTAKNAPDAKMIGLQE----------YVVDYITKPFDNEDLIEKTTFFMGFV 128 (142)
T ss_dssp EEEEEECTTCCCCSSTTGGG----------GEEEEEESSCCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHhc----------CccEEEeCCCCHHHHHHHHHHHHHHH
Confidence 6666 33322 2223333 67899999999999999999887643
No 93
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=40.17 E-value=80 Score=28.86 Aligned_cols=39 Identities=18% Similarity=0.068 Sum_probs=25.6
Q ss_pred ccCCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhC--CCcEEEEEec
Q 008154 61 QTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR--GHRVMVVSPR 108 (576)
Q Consensus 61 ~~~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~--G~~V~vi~~~ 108 (576)
...++|||+++.. |.+..+..+.+++.+. +++|..|...
T Consensus 18 ~~~~~~rI~~l~S---------G~g~~~~~~l~~l~~~~~~~~I~~Vvt~ 58 (229)
T 3auf_A 18 FQGHMIRIGVLIS---------GSGTNLQAILDGCREGRIPGRVAVVISD 58 (229)
T ss_dssp CBTTCEEEEEEES---------SCCHHHHHHHHHHHTTSSSEEEEEEEES
T ss_pred ccCCCcEEEEEEe---------CCcHHHHHHHHHHHhCCCCCeEEEEEcC
Confidence 3345689999942 3345577788888775 6777666543
No 94
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=39.55 E-value=38 Score=26.78 Aligned_cols=38 Identities=24% Similarity=0.220 Sum_probs=29.1
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhC-CC-cEEEEE
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR-GH-RVMVVS 106 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~-G~-~V~vi~ 106 (576)
||++++... .|+ .......+.+++.++.+. || +|.++-
T Consensus 2 ~k~~ii~~~-~p~--~~~~~~~al~~a~~~~~~~g~~~v~vff 41 (117)
T 1jx7_A 2 QKIVIVANG-APY--GSESLFNSLRLAIALREQESNLDLRLFL 41 (117)
T ss_dssp CEEEEEECC-CTT--TCSHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred cEEEEEEcC-CCC--CcHHHHHHHHHHHHHHhcCCCccEEEEE
Confidence 478887765 453 345667789999999999 99 998885
No 95
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=39.18 E-value=30 Score=28.08 Aligned_cols=32 Identities=22% Similarity=0.502 Sum_probs=22.7
Q ss_pred CceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEe
Q 008154 65 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~ 107 (576)
.|+|+++. .|.+| ..+++.|.+.|++|+++..
T Consensus 4 ~m~i~IiG--------~G~iG---~~~a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 4 GMYIIIAG--------IGRVG---YTLAKSLSEKGHDIVLIDI 35 (140)
T ss_dssp -CEEEEEC--------CSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEEC--------CCHHH---HHHHHHHHhCCCeEEEEEC
Confidence 47887772 14444 5678889999999999864
No 96
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=38.92 E-value=26 Score=33.87 Aligned_cols=35 Identities=26% Similarity=0.363 Sum_probs=25.1
Q ss_pred CCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 64 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 64 ~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
.+|+|+.+.. +|++| ..+++.|.+.||+|++++..
T Consensus 12 ~~M~ilVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 46 (342)
T 2x4g_A 12 AHVKYAVLGA-------TGLLG---HHAARAIRAAGHDLVLIHRP 46 (342)
T ss_dssp CCCEEEEEST-------TSHHH---HHHHHHHHHTTCEEEEEECT
T ss_pred cCCEEEEECC-------CcHHH---HHHHHHHHHCCCEEEEEecC
Confidence 4578877632 46666 55678888899999998753
No 97
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=38.88 E-value=40 Score=28.05 Aligned_cols=38 Identities=18% Similarity=0.135 Sum_probs=30.0
Q ss_pred c-eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEE
Q 008154 66 Y-NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 106 (576)
Q Consensus 66 m-kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~ 106 (576)
| |++++... .|+ ..-...-+.+++.++++.||+|.|+-
T Consensus 5 Mkk~~ivv~~-~P~--g~~~~~~al~~a~a~~a~~~~v~Vff 43 (136)
T 2hy5_B 5 VKKFMYLNRK-APY--GTIYAWEALEVVLIGAAFDQDVCVLF 43 (136)
T ss_dssp CCEEEEEECS-CTT--TSSHHHHHHHHHHHHGGGCCEEEEEE
T ss_pred hhEEEEEEeC-CCC--CcHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 5 58888865 563 44577778999999999999998884
No 98
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=38.64 E-value=42 Score=27.69 Aligned_cols=41 Identities=12% Similarity=-0.077 Sum_probs=31.3
Q ss_pred CCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEe
Q 008154 64 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 64 ~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~ 107 (576)
..+|++++... .|+ ...-...+..+|.++++.||+|.++-.
T Consensus 14 ~~~kl~ii~~s-gP~--~~~~~~~al~lA~~A~a~g~eV~vFf~ 54 (134)
T 3mc3_A 14 QXXXILIVVTH-GPE--DLDRTYAPLFMASISASMEYETSVFFM 54 (134)
T ss_dssp CCCEEEEEECC-CGG--GTHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccceEEEEEcc-CCC--CHHHHHHHHHHHHHHHHCCCCEEEEEE
Confidence 34688888765 452 456777888999999999999998853
No 99
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=38.55 E-value=1.6e+02 Score=23.87 Aligned_cols=108 Identities=10% Similarity=0.116 Sum_probs=63.3
Q ss_pred CcEEEEEeCCChhhHHHHHHHHHHhcC--ceEEEccCChhHHHHHH-----------hcCCEEEeCCCC-CCCcHHHHHH
Q 008154 411 DIQFVMLGSGDPQFESWMRDTEATYKD--KYRGWVGFNVPISHRIT-----------AGCDILLMPSRF-EPCGLNQLYA 476 (576)
Q Consensus 411 ~~~lii~G~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ll-----------~~~Dv~v~ps~~-E~~g~s~lEA 476 (576)
+.+++|+.+.+ ......+.+-+.... .+.... +...+...+ ...|+++.-... +.-|..+++.
T Consensus 4 ~~~ILivddd~-~~~~~l~~~L~~~g~~~~v~~~~--~~~~al~~l~~~~~~~~~~~~~~dliilD~~l~~~~g~~~~~~ 80 (152)
T 3heb_A 4 SVTIVMIEDDL-GHARLIEKNIRRAGVNNEIIAFT--DGTSALNYLFGDDKSGRVSAGRAQLVLLDLNLPDMTGIDILKL 80 (152)
T ss_dssp -CEEEEECCCH-HHHHHHHHHHHHTTCCCCEEEES--SHHHHHHHHHCTTSSSGGGTTCBEEEEECSBCSSSBHHHHHHH
T ss_pred CceEEEEeCCH-HHHHHHHHHHHhCCCcceEEEeC--CHHHHHHHHhccccccccccCCCCEEEEeCCCCCCcHHHHHHH
Confidence 45677777653 333333333333332 443333 344444455 346788775443 4668888887
Q ss_pred HHc-----CCceEEe-Cccc---cccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHH
Q 008154 477 MRY-----GTIPVVH-ATGG---LRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 477 ma~-----G~pvIat-~~gg---~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
+.. .+|+|.. .... ..+.+.. |..+++..|-+.+++.++|.++..
T Consensus 81 lr~~~~~~~~pii~~t~~~~~~~~~~~~~~----------g~~~~l~KP~~~~~l~~~i~~~~~ 134 (152)
T 3heb_A 81 VKENPHTRRSPVVILTTTDDQREIQRCYDL----------GANVYITKPVNYENFANAIRQLGL 134 (152)
T ss_dssp HHHSTTTTTSCEEEEESCCCHHHHHHHHHT----------TCSEEEECCSSHHHHHHHHHHHHH
T ss_pred HHhcccccCCCEEEEecCCCHHHHHHHHHC----------CCcEEEeCCCCHHHHHHHHHHHHH
Confidence 765 5677763 3322 1233343 788999999999999998888854
No 100
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=38.09 E-value=1.5e+02 Score=23.44 Aligned_cols=105 Identities=7% Similarity=0.076 Sum_probs=57.1
Q ss_pred CcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHh--cCCEEEeCCCCCCCcHHHHHHHHc---CCceEE
Q 008154 411 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSRFEPCGLNQLYAMRY---GTIPVV 485 (576)
Q Consensus 411 ~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~--~~Dv~v~ps~~E~~g~s~lEAma~---G~pvIa 485 (576)
..+++|+.+...........+. ....++.... +...+...+. ..|++|+| +.-|..+++.+.. .+|+|.
T Consensus 18 ~~~ilivdd~~~~~~~l~~~L~-~~g~~v~~~~--~~~~al~~l~~~~~dlvi~~---~~~g~~~~~~l~~~~~~~~ii~ 91 (137)
T 2pln_A 18 SMRVLLIEKNSVLGGEIEKGLN-VKGFMADVTE--SLEDGEYLMDIRNYDLVMVS---DKNALSFVSRIKEKHSSIVVLV 91 (137)
T ss_dssp CSEEEEECSCHHHHHHHHHHHH-HTTCEEEEES--CHHHHHHHHHHSCCSEEEEC---STTHHHHHHHHHHHSTTSEEEE
T ss_pred CCeEEEEeCCHHHHHHHHHHHH-HcCcEEEEeC--CHHHHHHHHHcCCCCEEEEc---CccHHHHHHHHHhcCCCccEEE
Confidence 4566777665322222233333 2223333222 3333333332 56888822 3456666666543 677776
Q ss_pred e-Cccc---cccccccccccccCCCCCcceeEeCCC-CHHHHHHHHHHHHH
Q 008154 486 H-ATGG---LRDTVENFNPFAREGSGEGTGWSFLPL-SEESMLTALRFAIR 531 (576)
Q Consensus 486 t-~~gg---~~e~i~~~~~~~~~~~~~~~G~~~~~~-d~~~la~~i~~~l~ 531 (576)
. .... ..+.+.. |..+++..|- +.+++.+.|..++.
T Consensus 92 ls~~~~~~~~~~~~~~----------g~~~~l~kP~~~~~~l~~~i~~~~~ 132 (137)
T 2pln_A 92 SSDNPTSEEEVHAFEQ----------GADDYIAKPYRSIKALVARIEARLR 132 (137)
T ss_dssp EESSCCHHHHHHHHHT----------TCSEEEESSCSCHHHHHHHHHHHTC
T ss_pred EeCCCCHHHHHHHHHc----------CCceeeeCCCCCHHHHHHHHHHHHh
Confidence 3 3322 2233333 7789999998 99998888887754
No 101
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=37.81 E-value=1e+02 Score=28.38 Aligned_cols=81 Identities=16% Similarity=0.146 Sum_probs=45.6
Q ss_pred EEEEEeC-CChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHh-cCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccc
Q 008154 413 QFVMLGS-GDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA-GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG 490 (576)
Q Consensus 413 ~lii~G~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~-~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg 490 (576)
++.++|- |. --....+.+.+....+++.......+. ..++. .+|++|--+.-++.--.+..++.+|+|+|....|.
T Consensus 2 kV~V~Ga~G~-mG~~i~~~~~~~~~~elva~~d~~~dl-~~~~~~~~DvvIDfT~p~a~~~~~~~a~~~g~~~VigTTG~ 79 (245)
T 1p9l_A 2 RVGVLGAKGK-VGTTMVRAVAAADDLTLSAELDAGDPL-SLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGF 79 (245)
T ss_dssp EEEEETTTSH-HHHHHHHHHHHCTTCEEEEEECTTCCT-HHHHHTTCCEEEECSCTTTHHHHHHHHHHTTCEEEECCCCC
T ss_pred EEEEECCCCH-HHHHHHHHHHhCCCCEEEEEEccCCCH-HHHhccCCcEEEEccChHHHHHHHHHHHHcCCCEEEcCCCC
Confidence 5677884 52 233344444332234555444432222 23444 89999955554554444456688999999977775
Q ss_pred ccccc
Q 008154 491 LRDTV 495 (576)
Q Consensus 491 ~~e~i 495 (576)
..|..
T Consensus 80 ~~e~~ 84 (245)
T 1p9l_A 80 TAERF 84 (245)
T ss_dssp CHHHH
T ss_pred CHHHH
Confidence 55533
No 102
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=37.15 E-value=29 Score=30.91 Aligned_cols=33 Identities=27% Similarity=0.398 Sum_probs=24.3
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
|||+.+.. +|++|. .+++.|.+.|++|++++..
T Consensus 1 MkvlVtGa-------tG~iG~---~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIGA-------TGRAGS---RILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEETT-------TSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CeEEEEcC-------CchhHH---HHHHHHHhCCCEEEEEEcC
Confidence 67776632 477774 5778889999999998743
No 103
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=37.09 E-value=28 Score=32.44 Aligned_cols=39 Identities=26% Similarity=0.291 Sum_probs=28.3
Q ss_pred CceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCC
Q 008154 65 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFN 111 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~ 111 (576)
+|||+..+.... ...-+..|+++|++.| +|+|++|...+
T Consensus 1 ~M~ILlTNDDGi-------~apGi~aL~~~l~~~g-~V~VVAP~~~~ 39 (251)
T 2phj_A 1 MPTFLLVNDDGY-------FSPGINALREALKSLG-RVVVVAPDRNL 39 (251)
T ss_dssp -CEEEEECSSCT-------TCHHHHHHHHHHTTTS-EEEEEEESSCC
T ss_pred CCEEEEECCCCC-------CCHHHHHHHHHHHhcC-CEEEEecCCCc
Confidence 389998876532 1223567788898898 99999998655
No 104
>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=36.47 E-value=52 Score=31.88 Aligned_cols=89 Identities=12% Similarity=0.053 Sum_probs=51.5
Q ss_pred HHHhcCCEEEeCCC-CCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHH
Q 008154 452 RITAGCDILLMPSR-FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAI 530 (576)
Q Consensus 452 ~ll~~~Dv~v~ps~-~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l 530 (576)
.-++.||++|.... +|+|--.++++.. +.++|....|--.....+ .+.. .+..-.-|+ +|.+...+++.|.+.|
T Consensus 90 ~~l~~ADlvv~nG~~lE~wl~k~~~~~~-~~~~v~~s~gi~~~~~~~--~~~~-~~~DPHvWl-dp~n~~~~a~~I~~~L 164 (321)
T 1xvl_A 90 VKAQDADLILYNGMNLERWFEQFLGNVK-DVPSVVLTEGIEPIPIAD--GPYT-DKPNPHAWM-SPRNALVYVENIRQAF 164 (321)
T ss_dssp HHHHTCSEEEECCTTSSTTHHHHHHTSS-SCCEEETTTTCCCCBCCS--SSST-TSBCCCGGG-SHHHHHHHHHHHHHHH
T ss_pred HHHhcCCEEEECCCChHHHHHHHHHhcC-CCcEEEccCCcccccccc--cCCC-CCCCCCcCC-CHHHHHHHHHHHHHHH
Confidence 46899999999876 7998888887765 566665543321110000 0000 000112344 6667788888888888
Q ss_pred HHhhhCHHHHHHHHHHH
Q 008154 531 RTYREHKSSWEGLMRRG 547 (576)
Q Consensus 531 ~~~~~~~~~~~~~~~~a 547 (576)
... ||+......+++
T Consensus 165 ~~~--DP~~a~~Y~~Na 179 (321)
T 1xvl_A 165 VEL--DPDNAKYYNANA 179 (321)
T ss_dssp HHH--CGGGHHHHHHHH
T ss_pred HHH--CcccHHHHHHHH
Confidence 754 665544444443
No 105
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=36.30 E-value=30 Score=30.93 Aligned_cols=32 Identities=31% Similarity=0.492 Sum_probs=23.6
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~ 107 (576)
|||+.+.. +|++| ..+++.|.+.|++|.+++.
T Consensus 1 MkilVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~R 32 (224)
T 3h2s_A 1 MKIAVLGA-------TGRAG---SAIVAEARRRGHEVLAVVR 32 (224)
T ss_dssp CEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEcC-------CCHHH---HHHHHHHHHCCCEEEEEEe
Confidence 67766632 46676 5677888999999999874
No 106
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=36.22 E-value=1.6e+02 Score=23.33 Aligned_cols=107 Identities=8% Similarity=0.024 Sum_probs=62.1
Q ss_pred cEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHH--hcCCEEEeCCCC-CCCcHHHHHHHHc-----CCce
Q 008154 412 IQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRIT--AGCDILLMPSRF-EPCGLNQLYAMRY-----GTIP 483 (576)
Q Consensus 412 ~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll--~~~Dv~v~ps~~-E~~g~s~lEAma~-----G~pv 483 (576)
.+++++.+. +......+.+-+...-.+... .+...+...+ ...|+++.-... +.-|+.+++.+.. .+|+
T Consensus 5 ~~iLivdd~-~~~~~~l~~~L~~~g~~v~~~--~~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pi 81 (136)
T 3t6k_A 5 HTLLIVDDD-DTVAEMLELVLRGAGYEVRRA--ASGEEALQQIYKNLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPI 81 (136)
T ss_dssp CEEEEECSC-HHHHHHHHHHHHHTTCEEEEE--SSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCE
T ss_pred CEEEEEeCC-HHHHHHHHHHHHHCCCEEEEe--CCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccE
Confidence 456666665 333333333333333333322 2343333344 356888875443 4567777777643 5677
Q ss_pred EE-eCccccc---cccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHH
Q 008154 484 VV-HATGGLR---DTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 484 Ia-t~~gg~~---e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
|. |..+... +.+.. |..+++..|-+.+++.+.+..++.
T Consensus 82 i~~t~~~~~~~~~~~~~~----------ga~~~l~KP~~~~~L~~~i~~~l~ 123 (136)
T 3t6k_A 82 LMLTAQGDISAKIAGFEA----------GANDYLAKPFEPQELVYRVKNILA 123 (136)
T ss_dssp EEEECTTCHHHHHHHHHH----------TCSEEEETTCCHHHHHHHHHHHHH
T ss_pred EEEecCCCHHHHHHHHhc----------CcceEEeCCCCHHHHHHHHHHHHh
Confidence 76 3333222 33344 788999999999999999998875
No 107
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=35.83 E-value=1.7e+02 Score=23.60 Aligned_cols=110 Identities=8% Similarity=0.102 Sum_probs=59.0
Q ss_pred CcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhc---CCEEEeCCCC-CCCcHHHHHHHHc---CCce
Q 008154 411 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAG---CDILLMPSRF-EPCGLNQLYAMRY---GTIP 483 (576)
Q Consensus 411 ~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~---~Dv~v~ps~~-E~~g~s~lEAma~---G~pv 483 (576)
.++++++.+.+.........+........+... .+...+...+.. .|+++.-... +.-|...++.+.. .+|+
T Consensus 3 ~~~iLivdd~~~~~~~l~~~L~~~~g~~~v~~~-~~~~~a~~~l~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~i 81 (154)
T 2qsj_A 3 LTVVLIVDDHHLIRAGAKNLLEGAFSGMRVEGA-ETVSDALAFLEADNTVDLILLDVNLPDAEAIDGLVRLKRFDPSNAV 81 (154)
T ss_dssp CEEEEEECSCHHHHHHHHHHHHHHCTTEEEEEE-SSHHHHHHHHHTTCCCSEEEECC------CHHHHHHHHHHCTTSEE
T ss_pred ccEEEEEcCCHHHHHHHHHHHHhCCCceEEEEe-cCHHHHHHHHhccCCCCEEEEeCCCCCCchHHHHHHHHHhCCCCeE
Confidence 356777776533223333333333122222222 234444445543 7888875543 3456777666653 6777
Q ss_pred EEeC-ccc---cccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHH
Q 008154 484 VVHA-TGG---LRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 484 Iat~-~gg---~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
|... ... ..+.+.. |..+++..|-+.+++.+.|..++.
T Consensus 82 i~ls~~~~~~~~~~~~~~----------g~~~~l~kp~~~~~L~~~l~~~~~ 123 (154)
T 2qsj_A 82 ALISGETDHELIRAALEA----------GADGFIPKSADPQVLIHAVSLILE 123 (154)
T ss_dssp EEC-----CHHHHHHHHT----------TCCBBCCTTSCHHHHHHHHHHHHT
T ss_pred EEEeCCCCHHHHHHHHHc----------cCCEEEeCCCCHHHHHHHHHHHHc
Confidence 7733 221 1233333 778899999999999999998875
No 108
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=35.21 E-value=1.4e+02 Score=24.18 Aligned_cols=109 Identities=11% Similarity=0.112 Sum_probs=60.0
Q ss_pred CcEEEEEeCCChhhHHHHHHHHHH-hcCceEEEccCChhHHHHHHh--cCCEEEeCCCC-CCCcHHHHHHHHc---CCce
Q 008154 411 DIQFVMLGSGDPQFESWMRDTEAT-YKDKYRGWVGFNVPISHRITA--GCDILLMPSRF-EPCGLNQLYAMRY---GTIP 483 (576)
Q Consensus 411 ~~~lii~G~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~--~~Dv~v~ps~~-E~~g~s~lEAma~---G~pv 483 (576)
..+++++.+.+ ......+.+-+. ....++.. ..+...+...+. ..|+++.-... +.-|..+++.+.. .+|+
T Consensus 5 ~~~ILivdd~~-~~~~~l~~~L~~~~~~~v~~~-~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~i 82 (153)
T 3cz5_A 5 TARIMLVDDHP-IVREGYRRLIERRPGYAVVAE-AADAGEAYRLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARI 82 (153)
T ss_dssp CEEEEEECSCH-HHHHHHHHHHTTSTTEEEEEE-ESSHHHHHHHHHTTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCE
T ss_pred ccEEEEECCcH-HHHHHHHHHHhhCCCcEEEEE-eCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeE
Confidence 45667776653 222322222222 22222211 123333334443 46888875443 4567777766543 6777
Q ss_pred EEe-Cccc---cccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHH
Q 008154 484 VVH-ATGG---LRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 484 Iat-~~gg---~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
|.. .... ..+.+.. |..+++..|-+.+++.+.|..++.
T Consensus 83 i~ls~~~~~~~~~~~~~~----------g~~~~l~kp~~~~~L~~~i~~~~~ 124 (153)
T 3cz5_A 83 LIFTMHQGSAFALKAFEA----------GASGYVTKSSDPAELVQAIEAILA 124 (153)
T ss_dssp EEEESCCSHHHHHHHHHT----------TCSEEEETTSCTTHHHHHHHHHTT
T ss_pred EEEECCCCHHHHHHHHHC----------CCcEEEecCCCHHHHHHHHHHHHh
Confidence 763 3322 2223333 788999999999999998888865
No 109
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=35.07 E-value=30 Score=33.31 Aligned_cols=40 Identities=23% Similarity=0.260 Sum_probs=24.5
Q ss_pred hhccCCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 59 KAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 59 ~~~~~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
.....++|+|+.+.. +|++| ..+++.|.+.|++|+++...
T Consensus 8 ~~~~~~~~~vlVTGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 47 (335)
T 1rpn_A 8 HHHGSMTRSALVTGI-------TGQDG---AYLAKLLLEKGYRVHGLVAR 47 (335)
T ss_dssp -------CEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred ccccccCCeEEEECC-------CChHH---HHHHHHHHHCCCeEEEEeCC
Confidence 344556788887732 46676 45778888999999988743
No 110
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=34.80 E-value=1.7e+02 Score=23.07 Aligned_cols=108 Identities=10% Similarity=0.044 Sum_probs=63.0
Q ss_pred CcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHH--hcCCEEEeCCCC-CCCcHHHHHHHHc---CCceE
Q 008154 411 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRIT--AGCDILLMPSRF-EPCGLNQLYAMRY---GTIPV 484 (576)
Q Consensus 411 ~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll--~~~Dv~v~ps~~-E~~g~s~lEAma~---G~pvI 484 (576)
..+++|+.+.........+.+.. ....+.... +.+.+...+ ...|+++.-... +.-|..+++.+.. .+|+|
T Consensus 7 ~~~ilivdd~~~~~~~l~~~L~~-~~~~v~~~~--~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii 83 (137)
T 3hdg_A 7 ALKILIVEDDTDAREWLSTIISN-HFPEVWSAG--DGEEGERLFGLHAPDVIITDIRMPKLGGLEMLDRIKAGGAKPYVI 83 (137)
T ss_dssp CCCEEEECSCHHHHHHHHHHHHT-TCSCEEEES--SHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCCCEEE
T ss_pred ccEEEEEeCCHHHHHHHHHHHHh-cCcEEEEEC--CHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEE
Confidence 46777777763322333333332 222333332 333333333 367888876553 4567777776654 56777
Q ss_pred EeC-ccc---cccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHH
Q 008154 485 VHA-TGG---LRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 485 at~-~gg---~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
... ... ..+.+.. |..+++..|-+.+++.+.|.+++.
T Consensus 84 ~~s~~~~~~~~~~~~~~----------g~~~~l~kP~~~~~l~~~i~~~~~ 124 (137)
T 3hdg_A 84 VISAFSEMKYFIKAIEL----------GVHLFLPKPIEPGRLMETLEDFRH 124 (137)
T ss_dssp ECCCCCCHHHHHHHHHH----------CCSEECCSSCCHHHHHHHHHHHHH
T ss_pred EEecCcChHHHHHHHhC----------CcceeEcCCCCHHHHHHHHHHHHH
Confidence 643 222 2233344 788999999999999999998875
No 111
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=34.50 E-value=1.7e+02 Score=23.09 Aligned_cols=109 Identities=8% Similarity=-0.001 Sum_probs=63.8
Q ss_pred CcEEEEEeCCChhhHHHHHHHHHHhcCc-eEEEccCChhHHHHHHh--cCCEEEeCCCC-CCCcHHHHHHHHc-----CC
Q 008154 411 DIQFVMLGSGDPQFESWMRDTEATYKDK-YRGWVGFNVPISHRITA--GCDILLMPSRF-EPCGLNQLYAMRY-----GT 481 (576)
Q Consensus 411 ~~~lii~G~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ll~--~~Dv~v~ps~~-E~~g~s~lEAma~-----G~ 481 (576)
..+++++.+.+.........+......+ +.... +.+.+...+. ..|+++.-... +.-|..+++.+.. .+
T Consensus 8 ~~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~--~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~ 85 (143)
T 3cnb_A 8 DFSILIIEDDKEFADMLTQFLENLFPYAKIKIAY--NPFDAGDLLHTVKPDVVMLDLMMVGMDGFSICHRIKSTPATANI 85 (143)
T ss_dssp -CEEEEECSCHHHHHHHHHHHHHHCTTCEEEEEC--SHHHHHHHHHHTCCSEEEEETTCTTSCHHHHHHHHHTSTTTTTS
T ss_pred CceEEEEECCHHHHHHHHHHHHhccCccEEEEEC--CHHHHHHHHHhcCCCEEEEecccCCCcHHHHHHHHHhCccccCC
Confidence 4677777776433333333333313334 33222 3333333443 57888876553 4567778877765 56
Q ss_pred ceEE-eCcccc---ccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHH
Q 008154 482 IPVV-HATGGL---RDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 482 pvIa-t~~gg~---~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
|+|. |..... .+.+.. |..+++..|-+.+++.+.|..++.
T Consensus 86 ~ii~~s~~~~~~~~~~~~~~----------g~~~~l~kP~~~~~l~~~i~~~~~ 129 (143)
T 3cnb_A 86 IVIAMTGALTDDNVSRIVAL----------GAETCFGKPLNFTLLEKTIKQLVE 129 (143)
T ss_dssp EEEEEESSCCHHHHHHHHHT----------TCSEEEESSCCHHHHHHHHHHHHH
T ss_pred cEEEEeCCCCHHHHHHHHhc----------CCcEEEeCCCCHHHHHHHHHHHHH
Confidence 7776 333322 233333 778999999999999999998876
No 112
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=34.38 E-value=30 Score=33.59 Aligned_cols=39 Identities=13% Similarity=0.044 Sum_probs=27.1
Q ss_pred hccCCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 60 AQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 60 ~~~~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
.|.-.+|+|+.+.. +|++| ..+++.|.+.|++|+++...
T Consensus 20 ~~~~~~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 58 (351)
T 3ruf_A 20 QLIFSPKTWLITGV-------AGFIG---SNLLEKLLKLNQVVIGLDNF 58 (351)
T ss_dssp HHHHSCCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred hCCCCCCeEEEECC-------CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 34445678877632 46666 56778888999999998753
No 113
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=34.15 E-value=1.8e+02 Score=23.40 Aligned_cols=110 Identities=13% Similarity=0.038 Sum_probs=62.0
Q ss_pred CcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHH--hcCCEEEeCCC-CCCCcHHHHHHHHc---CCceE
Q 008154 411 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRIT--AGCDILLMPSR-FEPCGLNQLYAMRY---GTIPV 484 (576)
Q Consensus 411 ~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll--~~~Dv~v~ps~-~E~~g~s~lEAma~---G~pvI 484 (576)
..+++|+.+.+.......+.+.......++... .+...+...+ ...|+++.-.. .+.-|..+++.+.. .+|+|
T Consensus 15 ~~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~-~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii 93 (152)
T 3eul_A 15 KVRVVVGDDHPLFREGVVRALSLSGSVNVVGEA-DDGAAALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVL 93 (152)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHSSEEEEEEE-SSHHHHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEE
T ss_pred eEEEEEEcCCHHHHHHHHHHHhhCCCeEEEEEe-CCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEE
Confidence 566777776532223333333332212222222 2333333333 46788877554 34567777776654 46666
Q ss_pred E-eCcccc---ccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHH
Q 008154 485 V-HATGGL---RDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 485 a-t~~gg~---~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
. |..... .+.+.. |..+++..|.+.+++.++|..++.
T Consensus 94 ~~s~~~~~~~~~~~~~~----------g~~~~l~Kp~~~~~l~~~i~~~~~ 134 (152)
T 3eul_A 94 LISAHDEPAIVYQALQQ----------GAAGFLLKDSTRTEIVKAVLDCAK 134 (152)
T ss_dssp EEESCCCHHHHHHHHHT----------TCSEEEETTCCHHHHHHHHHHHHH
T ss_pred EEEccCCHHHHHHHHHc----------CCCEEEecCCCHHHHHHHHHHHHc
Confidence 6 333222 233444 788999999999999999998876
No 114
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=34.08 E-value=1.8e+02 Score=23.15 Aligned_cols=67 Identities=10% Similarity=0.110 Sum_probs=45.3
Q ss_pred cCCEEEeCCCC-CCCcHHHHHHHH-----cCCceEEe-Ccccc---ccccccccccccCCCCCcceeEeCCCCHHHHHHH
Q 008154 456 GCDILLMPSRF-EPCGLNQLYAMR-----YGTIPVVH-ATGGL---RDTVENFNPFAREGSGEGTGWSFLPLSEESMLTA 525 (576)
Q Consensus 456 ~~Dv~v~ps~~-E~~g~s~lEAma-----~G~pvIat-~~gg~---~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~ 525 (576)
..|+++.-... +.-|..+++.+. ..+|+|.. ..... .+.+.. |..+++..|-+.+++.+.
T Consensus 62 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~t~~~~~~~~~~~~~~----------g~~~~l~kP~~~~~l~~~ 131 (149)
T 1k66_A 62 RPAVILLDLNLPGTDGREVLQEIKQDEVLKKIPVVIMTTSSNPKDIEICYSY----------SISSYIVKPLEIDRLTET 131 (149)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHTTSTTGGGSCEEEEESCCCHHHHHHHHHT----------TCSEEEECCSSHHHHHHH
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHhCcccCCCeEEEEeCCCCHHHHHHHHHC----------CCCEEEeCCCCHHHHHHH
Confidence 46888875543 456777777765 35677763 33221 223333 778999999999999999
Q ss_pred HHHHHHH
Q 008154 526 LRFAIRT 532 (576)
Q Consensus 526 i~~~l~~ 532 (576)
|..++..
T Consensus 132 i~~~~~~ 138 (149)
T 1k66_A 132 VQTFIKY 138 (149)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9888764
No 115
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=34.04 E-value=21 Score=33.70 Aligned_cols=38 Identities=18% Similarity=0.281 Sum_probs=23.8
Q ss_pred hhccCCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEE
Q 008154 59 KAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 106 (576)
Q Consensus 59 ~~~~~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~ 106 (576)
.....+.++|+.+.. +|++| ..+++.|.+.|++|+++.
T Consensus 6 ~~~~~~~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~ 43 (292)
T 1vl0_A 6 IHHHHHHMKILITGA-------NGQLG---REIQKQLKGKNVEVIPTD 43 (292)
T ss_dssp ------CEEEEEEST-------TSHHH---HHHHHHHTTSSEEEEEEC
T ss_pred cccccccceEEEECC-------CChHH---HHHHHHHHhCCCeEEecc
Confidence 445556788887732 46666 557788889999988875
No 116
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=33.70 E-value=41 Score=30.17 Aligned_cols=25 Identities=12% Similarity=0.097 Sum_probs=21.3
Q ss_pred HHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 84 LGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 84 ~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
.|..-..+++.|.+.|++|+++..+
T Consensus 8 ~G~~G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 8 GETTAYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCHHHHHHHHHHHhCCCeEEEEECC
Confidence 4777888999999999999999743
No 117
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=33.09 E-value=1.8e+02 Score=22.90 Aligned_cols=107 Identities=11% Similarity=0.076 Sum_probs=58.1
Q ss_pred cEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHh--cCCEEEeCCCC------CCCcHHHHHHHH---cC
Q 008154 412 IQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSRF------EPCGLNQLYAMR---YG 480 (576)
Q Consensus 412 ~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~--~~Dv~v~ps~~------E~~g~s~lEAma---~G 480 (576)
.+++++.+.+ ......+..-+....++.... +...+...+. ..|+++.-... +.-|...++.+. ..
T Consensus 4 ~~ilivdd~~-~~~~~l~~~L~~~g~~v~~~~--~~~~a~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~ 80 (140)
T 2qr3_A 4 GTIIIVDDNK-GVLTAVQLLLKNHFSKVITLS--SPVSLSTVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRD 80 (140)
T ss_dssp CEEEEECSCH-HHHHHHHHHHTTTSSEEEEEC--CHHHHHHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTT
T ss_pred ceEEEEeCCH-HHHHHHHHHHHhCCcEEEEeC--CHHHHHHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcC
Confidence 4566676653 222322222222222333222 3333334443 45777764432 445666666654 36
Q ss_pred CceEEe-Cccc---cccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHH
Q 008154 481 TIPVVH-ATGG---LRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 481 ~pvIat-~~gg---~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
+|+|.. .... ..+.+.. |..+++..|-+.+++.+.|..++.
T Consensus 81 ~~ii~ls~~~~~~~~~~~~~~----------g~~~~l~kp~~~~~l~~~l~~~~~ 125 (140)
T 2qr3_A 81 LPVVLFTAYADIDLAVRGIKE----------GASDFVVKPWDNQKLLETLLNAAS 125 (140)
T ss_dssp CCEEEEEEGGGHHHHHHHHHT----------TCCEEEEESCCHHHHHHHHHHHHT
T ss_pred CCEEEEECCCCHHHHHHHHHc----------CchheeeCCCCHHHHHHHHHHHHH
Confidence 777763 3222 2233333 778999999999999999988875
No 118
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=32.77 E-value=38 Score=31.29 Aligned_cols=41 Identities=27% Similarity=0.382 Sum_probs=29.3
Q ss_pred CCCceEEEEeeccCCccccCcHH--HHHhhHHHHHHhCCCcEEEEEecC
Q 008154 63 RVSYNIVFVTAEAAPYSKTGGLG--DVCGSLPVALAARGHRVMVVSPRY 109 (576)
Q Consensus 63 ~~~mkI~~~s~e~~P~~~~GG~~--~~~~~la~~l~~~G~~V~vi~~~~ 109 (576)
.++|+|..|+. + .||.| +.+..+|.+|++.|.+|.+|-.+.
T Consensus 3 ~~~~~vI~v~s---~---kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 45 (257)
T 1wcv_1 3 RAKVRRIALAN---Q---KGGVGKTTTAINLAAYLARLGKRVLLVDLDP 45 (257)
T ss_dssp --CCCEEEECC---S---SCCHHHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCEEEEEEe---C---CCCchHHHHHHHHHHHHHHCCCCEEEEECCC
Confidence 34566666653 1 35555 788999999999999999997653
No 119
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=32.26 E-value=1.9e+02 Score=22.94 Aligned_cols=107 Identities=9% Similarity=0.106 Sum_probs=63.1
Q ss_pred cEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHh----cCCEEEeCCC-CCCCcHHHHHHHHc---CCce
Q 008154 412 IQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA----GCDILLMPSR-FEPCGLNQLYAMRY---GTIP 483 (576)
Q Consensus 412 ~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~----~~Dv~v~ps~-~E~~g~s~lEAma~---G~pv 483 (576)
.+++|+.+.+ ......+.+-+.....+.... +.+.+...+. ..|+++.-.. .+.-|..+++.+.. .+|+
T Consensus 4 ~~ilivdd~~-~~~~~l~~~l~~~g~~v~~~~--~~~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~i 80 (143)
T 3jte_A 4 AKILVIDDES-TILQNIKFLLEIDGNEVLTAS--SSTEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKITPHMAV 80 (143)
T ss_dssp CEEEEECSCH-HHHHHHHHHHHHTTCEEEEES--SHHHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEE
T ss_pred CEEEEEcCCH-HHHHHHHHHHHhCCceEEEeC--CHHHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeE
Confidence 4667777653 333333333333333333222 3333434444 6788887554 34567777766543 5677
Q ss_pred EEe-Cccc---cccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHH
Q 008154 484 VVH-ATGG---LRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 484 Iat-~~gg---~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
|.. .... ..+.+.. |..+++..|-+.+++.++|..++.
T Consensus 81 i~ls~~~~~~~~~~~~~~----------g~~~~l~kp~~~~~l~~~l~~~~~ 122 (143)
T 3jte_A 81 IILTGHGDLDNAILAMKE----------GAFEYLRKPVTAQDLSIAINNAIN 122 (143)
T ss_dssp EEEECTTCHHHHHHHHHT----------TCSEEEESSCCHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHh----------CcceeEeCCCCHHHHHHHHHHHHH
Confidence 763 3322 2233444 788999999999999999998876
No 120
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=32.01 E-value=1.8e+02 Score=22.51 Aligned_cols=109 Identities=10% Similarity=0.099 Sum_probs=60.9
Q ss_pred CcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHh--cCCEEEeCCCC-CCCcHHHHHHHHc-----CCc
Q 008154 411 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSRF-EPCGLNQLYAMRY-----GTI 482 (576)
Q Consensus 411 ~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~--~~Dv~v~ps~~-E~~g~s~lEAma~-----G~p 482 (576)
+++++++.+.+ ......+.+-+......+... .+...+...+. ..|+++.-... +.-|..+++.+.. .+|
T Consensus 4 ~~~ilivdd~~-~~~~~l~~~l~~~~~~~v~~~-~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~~ 81 (128)
T 1jbe_A 4 ELKFLVVDDFS-TMRRIVRNLLKELGFNNVEEA-EDGVDALNKLQAGGYGFVISDWNMPNMDGLELLKTIRAXXAMSALP 81 (128)
T ss_dssp TCCEEEECSCH-HHHHHHHHHHHHTTCCCEEEE-SSHHHHHHHHTTCCCCEEEEESCCSSSCHHHHHHHHHC--CCTTCC
T ss_pred ccEEEEECCCH-HHHHHHHHHHHHcCCcEEEee-CCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCc
Confidence 45667776653 333333333223322122222 13333333443 46888765443 3567888887764 467
Q ss_pred eEE-eCcccc---ccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHH
Q 008154 483 PVV-HATGGL---RDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 483 vIa-t~~gg~---~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
+|. |..... .+.+.. |..+++..|-+.+++.+.+..++.
T Consensus 82 ii~~s~~~~~~~~~~~~~~----------ga~~~l~KP~~~~~l~~~i~~~~~ 124 (128)
T 1jbe_A 82 VLMVTAEAKKENIIAAAQA----------GASGYVVKPFTAATLEEKLNKIFE 124 (128)
T ss_dssp EEEEESSCCHHHHHHHHHT----------TCSEEEESSCCHHHHHHHHHHHHH
T ss_pred EEEEecCccHHHHHHHHHh----------CcCceeecCCCHHHHHHHHHHHHH
Confidence 765 333222 233333 778999999999999998888764
No 121
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=31.99 E-value=40 Score=30.52 Aligned_cols=35 Identities=20% Similarity=0.329 Sum_probs=25.5
Q ss_pred CCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 64 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 64 ~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
++|+|+.+.. +||+|. .+++.|.+.|++|++++..
T Consensus 20 ~~~~ilVtGa-------tG~iG~---~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 20 QGMRVLVVGA-------NGKVAR---YLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp -CCEEEEETT-------TSHHHH---HHHHHHHHTTCEEEEEESS
T ss_pred CCCeEEEECC-------CChHHH---HHHHHHHhCCCeEEEEECC
Confidence 4578877732 577875 5678888999999998743
No 122
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=31.38 E-value=69 Score=25.68 Aligned_cols=37 Identities=24% Similarity=0.169 Sum_probs=28.5
Q ss_pred eEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEE
Q 008154 67 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 106 (576)
Q Consensus 67 kI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~ 106 (576)
|++++... .|+ ..-.+.-+.+++.++.+.||+|.|+-
T Consensus 3 k~~~vv~~-~P~--g~~~~~~al~~a~a~~a~~~~v~vff 39 (119)
T 2d1p_B 3 RIAFVFST-APH--GTAAGREGLDALLATSALTDDLAVFF 39 (119)
T ss_dssp CEEEEECS-CTT--TSTHHHHHHHHHHHHHTTCSCEEEEE
T ss_pred EEEEEEcC-CCC--CcHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 58888765 563 34466778899999999999998884
No 123
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=31.35 E-value=15 Score=33.89 Aligned_cols=35 Identities=17% Similarity=0.213 Sum_probs=25.5
Q ss_pred cCCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEe
Q 008154 62 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 62 ~~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~ 107 (576)
..+.|||+++.. |-+| +.+++.|.+.||+|+++..
T Consensus 3 ~~~~mkI~IIG~--------G~~G---~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 3 QAPRLRVGIFDD--------GSST---VNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCCCCEEEEECC--------SCCC---SCHHHHHHHTTCEEEECSS
T ss_pred CCCCcEEEEEee--------CHHH---HHHHHHHHHCCCEEEEecC
Confidence 345689999853 3333 6788999999999888753
No 124
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=31.02 E-value=39 Score=31.32 Aligned_cols=38 Identities=18% Similarity=0.183 Sum_probs=27.2
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCC
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFN 111 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~ 111 (576)
|||+..+.... ...-+..|+++|++.| +|+|++|...+
T Consensus 1 M~ILlTNDDGi-------~apGi~aL~~~l~~~g-~V~VVAP~~~~ 38 (244)
T 2e6c_A 1 MRILVTNDDGI-------YSPGLWALAEAASQFG-EVFVAAPDTEQ 38 (244)
T ss_dssp CEEEEECSSCT-------TCHHHHHHHHHHTTTS-EEEEEEECSSC
T ss_pred CeEEEEcCCCC-------CcHhHHHHHHHHHhCC-CEEEEecCCCC
Confidence 78888766532 1223567788888888 89999998655
No 125
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=30.60 E-value=36 Score=32.91 Aligned_cols=37 Identities=27% Similarity=0.329 Sum_probs=23.4
Q ss_pred cCCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 62 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 62 ~~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
..++|+|+.+.. +|++| ..+++.|.+.|++|+++...
T Consensus 16 ~~~~~~vlVtGa-------tG~iG---~~l~~~L~~~G~~V~~~~r~ 52 (347)
T 4id9_A 16 PRGSHMILVTGS-------AGRVG---RAVVAALRTQGRTVRGFDLR 52 (347)
T ss_dssp -----CEEEETT-------TSHHH---HHHHHHHHHTTCCEEEEESS
T ss_pred ccCCCEEEEECC-------CChHH---HHHHHHHHhCCCEEEEEeCC
Confidence 345677877632 46666 45778899999999998643
No 126
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=30.38 E-value=43 Score=29.98 Aligned_cols=34 Identities=29% Similarity=0.371 Sum_probs=24.0
Q ss_pred CceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 65 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
+|+|+.+.. +|++| ..+++.|.+.|++|++++..
T Consensus 4 m~~ilItGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 4 VKKIVLIGA-------SGFVG---SALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CCEEEEETC-------CHHHH---HHHHHHHHTTTCEEEEECSC
T ss_pred CCEEEEEcC-------CchHH---HHHHHHHHHCCCEEEEEEcC
Confidence 367776621 35555 56788899999999998643
No 127
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=30.37 E-value=2.2e+02 Score=23.02 Aligned_cols=108 Identities=12% Similarity=0.119 Sum_probs=61.2
Q ss_pred CcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHh--cCCEEEeCCCC-CCCcHHHHHHHHc---CCceE
Q 008154 411 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSRF-EPCGLNQLYAMRY---GTIPV 484 (576)
Q Consensus 411 ~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~--~~Dv~v~ps~~-E~~g~s~lEAma~---G~pvI 484 (576)
+.+++|+.+.+.........+. .....+.... +...+...+. ..|+++.-... +.-|..+++.+.. .+|+|
T Consensus 7 ~~~iLivdd~~~~~~~l~~~L~-~~g~~v~~~~--~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii 83 (154)
T 2rjn_A 7 NYTVMLVDDEQPILNSLKRLIK-RLGCNIITFT--SPLDALEALKGTSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERV 83 (154)
T ss_dssp CCEEEEECSCHHHHHHHHHHHH-TTTCEEEEES--CHHHHHHHHTTSCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHH-HcCCeEEEeC--CHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEE
Confidence 5677777776432223333333 2233333222 3343434443 46888875443 3457777666643 67777
Q ss_pred Ee-Ccccc---ccccccccccccCCCCC-cceeEeCCCCHHHHHHHHHHHHH
Q 008154 485 VH-ATGGL---RDTVENFNPFAREGSGE-GTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 485 at-~~gg~---~e~i~~~~~~~~~~~~~-~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
.. ..... .+.+.. | ..+++..|-+.+++.+.|..++.
T Consensus 84 ~ls~~~~~~~~~~~~~~----------g~~~~~l~kP~~~~~L~~~i~~~~~ 125 (154)
T 2rjn_A 84 VISGYADAQATIDAVNR----------GKISRFLLKPWEDEDVFKVVEKGLQ 125 (154)
T ss_dssp EEECGGGHHHHHHHHHT----------TCCSEEEESSCCHHHHHHHHHHHHH
T ss_pred EEecCCCHHHHHHHHhc----------cchheeeeCCCCHHHHHHHHHHHHH
Confidence 63 33221 222232 4 67899999999999999998875
No 128
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=30.35 E-value=40 Score=32.11 Aligned_cols=25 Identities=24% Similarity=0.227 Sum_probs=19.0
Q ss_pred cCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 81 TGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 81 ~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
+|++| ..+++.|.+.|++|+++...
T Consensus 21 tG~iG---~~l~~~L~~~G~~V~~~~r~ 45 (321)
T 2pk3_A 21 AGFVG---KYLANHLTEQNVEVFGTSRN 45 (321)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CChHH---HHHHHHHHHCCCEEEEEecC
Confidence 46666 45778888999999988643
No 129
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=29.92 E-value=42 Score=31.13 Aligned_cols=38 Identities=18% Similarity=0.184 Sum_probs=27.1
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCC
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFN 111 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~ 111 (576)
|||+..+....- + .-+..|+++|++.| +|+|++|...+
T Consensus 1 M~ILlTNDDGi~---a----pGi~aL~~~l~~~g-~V~VVAP~~~~ 38 (247)
T 1j9j_A 1 MRILVTNDDGIQ---S----KGIIVLAELLSEEH-EVFVVAPDKER 38 (247)
T ss_dssp CEEEEECSSCTT---C----HHHHHHHHHHTTTS-EEEEEEESSCC
T ss_pred CeEEEEcCCCCC---c----HhHHHHHHHHHhCC-CEEEEecCCCC
Confidence 788887665321 2 23567778888888 89999998665
No 130
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=29.34 E-value=37 Score=30.30 Aligned_cols=33 Identities=24% Similarity=0.358 Sum_probs=24.4
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
|||+.+.. +|++| ..+++.|.+.|++|.+++..
T Consensus 1 M~ilItGa-------tG~iG---~~l~~~L~~~g~~V~~~~R~ 33 (219)
T 3dqp_A 1 MKIFIVGS-------TGRVG---KSLLKSLSTTDYQIYAGARK 33 (219)
T ss_dssp CEEEEEST-------TSHHH---HHHHHHHTTSSCEEEEEESS
T ss_pred CeEEEECC-------CCHHH---HHHHHHHHHCCCEEEEEECC
Confidence 67776632 47777 56788899999999999744
No 131
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=29.20 E-value=2.2e+02 Score=22.83 Aligned_cols=110 Identities=14% Similarity=0.076 Sum_probs=61.3
Q ss_pred CcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHh--cCCEEEeCCC-CCCCcHHHHHHHHc---CCceE
Q 008154 411 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSR-FEPCGLNQLYAMRY---GTIPV 484 (576)
Q Consensus 411 ~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~--~~Dv~v~ps~-~E~~g~s~lEAma~---G~pvI 484 (576)
.++++|+.+.. ......+.+-+..........-.+.+.+...+. ..|+++.-.. .+.-|+.+++.+.. .+|+|
T Consensus 20 m~~iLivdd~~-~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii 98 (150)
T 4e7p_A 20 HMKVLVAEDQS-MLRDAMCQLLTLQPDVESVLQAKNGQEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVV 98 (150)
T ss_dssp CEEEEEECSCH-HHHHHHHHHHHTSTTEEEEEEESSHHHHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEE
T ss_pred ccEEEEEcCCH-HHHHHHHHHHHhCCCcEEEEEECCHHHHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEE
Confidence 45677776653 223323222222211121112123343434443 4688877654 34667777776654 56666
Q ss_pred Ee-Cccc---cccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHH
Q 008154 485 VH-ATGG---LRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 485 at-~~gg---~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
.. .... ..+.+.. |..+++..|-+.+++.++|..++.
T Consensus 99 ~ls~~~~~~~~~~~~~~----------g~~~~l~Kp~~~~~l~~~i~~~~~ 139 (150)
T 4e7p_A 99 VVTTFKRAGYFERAVKA----------GVDAYVLKERSIADLMQTLHTVLE 139 (150)
T ss_dssp EEESCCCHHHHHHHHHT----------TCSEEEETTSCHHHHHHHHHHHHT
T ss_pred EEeCCCCHHHHHHHHHC----------CCcEEEecCCCHHHHHHHHHHHHc
Confidence 63 3222 2233444 788999999999999999988875
No 132
>3klo_A Transcriptional regulator VPST; REC domain, HTH domain, DNA-binding, transcription regulation; HET: C2E TAR; 2.80A {Vibrio cholerae} PDB: 3kln_A*
Probab=29.17 E-value=2.3e+02 Score=24.91 Aligned_cols=114 Identities=7% Similarity=-0.005 Sum_probs=59.7
Q ss_pred CcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHH--hcCCEEEeCCCC-CCCcHHHHHHHHc----CCce
Q 008154 411 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRIT--AGCDILLMPSRF-EPCGLNQLYAMRY----GTIP 483 (576)
Q Consensus 411 ~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll--~~~Dv~v~ps~~-E~~g~s~lEAma~----G~pv 483 (576)
..+++|+.+.+.........+.......++....-..+.+..++ ...|+++.=-.. +.-|+.+++.+.. .+|+
T Consensus 7 ~~~IlivdD~~~~~~~l~~~L~~~~~~~v~~~~~~~~~~~~~~~~~~~~dlvllD~~mp~~~G~~~~~~lr~~~~~~~~i 86 (225)
T 3klo_A 7 KLNVRMLSDVCMQSRLLKEALESKLPLALEITPFSELWLEENKPESRSIQMLVIDYSRISDDVLTDYSSFKHISCPDAKE 86 (225)
T ss_dssp SEEEEEESCCSHHHHHHHHHHHHHSSEEEEEECGGGHHHHTTCSGGGGCCEEEEEGGGCCHHHHHHHHHHHHHHCTTCEE
T ss_pred ceEEEEEcCcHHHHHHHHHHHhhCCCceEEEEeCCcHHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHHhhCCCCcE
Confidence 46777777764333333333332222233222111122121122 357888864332 3456666665543 6777
Q ss_pred EE-eCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHH
Q 008154 484 VV-HATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 484 Ia-t~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
|. |..........- .+.|..|++..|.+++++.++|..++.
T Consensus 87 i~lt~~~~~~~~~~~-------~~~Ga~~~l~Kp~~~~~L~~~i~~~~~ 128 (225)
T 3klo_A 87 VIINCPQDIEHKLLF-------KWNNLAGVFYIDDDMDTLIKGMSKILQ 128 (225)
T ss_dssp EEEEECTTCCHHHHT-------TSTTEEEEEETTCCHHHHHHHHHHHHT
T ss_pred EEEECCcchhHHHHH-------HHhCCCEEEecCCCHHHHHHHHHHHHC
Confidence 66 332222221111 112788999999999999999988875
No 133
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=28.85 E-value=67 Score=28.07 Aligned_cols=39 Identities=15% Similarity=0.209 Sum_probs=28.8
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
|||..|+.. ...-|-.+.+..+|.+|++.|.+|.+|-.+
T Consensus 1 M~vi~v~s~----kgG~GKTt~a~~la~~la~~g~~vlliD~D 39 (206)
T 4dzz_A 1 MKVISFLNP----KGGSGKTTAVINIATALSRSGYNIAVVDTD 39 (206)
T ss_dssp CEEEEECCS----STTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEEeC----CCCccHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 566656532 123456788899999999999999999765
No 134
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=28.85 E-value=3.2e+02 Score=24.47 Aligned_cols=109 Identities=13% Similarity=0.126 Sum_probs=62.6
Q ss_pred CcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHH--hcCCEEEeCCCC-CCCcHHHHHHHHc---CCceE
Q 008154 411 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRIT--AGCDILLMPSRF-EPCGLNQLYAMRY---GTIPV 484 (576)
Q Consensus 411 ~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll--~~~Dv~v~ps~~-E~~g~s~lEAma~---G~pvI 484 (576)
..+++|+.+.+ ......+.+-+.....+... .+.+.+...+ ...|+++.--.. +.-|+.+++.+.. .+|+|
T Consensus 23 ~~~ILivdd~~-~~~~~l~~~L~~~g~~v~~~--~~~~~al~~~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii 99 (250)
T 3r0j_A 23 EARVLVVDDEA-NIVELLSVSLKFQGFEVYTA--TNGAQALDRARETRPDAVILDVXMPGMDGFGVLRRLRADGIDAPAL 99 (250)
T ss_dssp SCEEEEECSCH-HHHHHHHHHHHHTTCEEEEE--SSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEE
T ss_pred CceEEEEECCH-HHHHHHHHHHHHCCCEEEEE--CCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEE
Confidence 45677776653 23333332222222233322 2333333333 357888765442 4567777777653 56777
Q ss_pred E-eCccccc---cccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHH
Q 008154 485 V-HATGGLR---DTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRT 532 (576)
Q Consensus 485 a-t~~gg~~---e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~ 532 (576)
. |...... +.+.. |..+++..|.+.+++.++|..++..
T Consensus 100 ~lt~~~~~~~~~~~~~~----------Ga~~yl~Kp~~~~~L~~~i~~~~~~ 141 (250)
T 3r0j_A 100 FLTARDSLQDKIAGLTL----------GGDDYVTKPFSLEEVVARLRVILRR 141 (250)
T ss_dssp EEECSTTHHHHHHHHTS----------TTCEEEESSCCHHHHHHHHHHHHHH
T ss_pred EEECCCCHHHHHHHHHc----------CCcEEEeCCCCHHHHHHHHHHHHHh
Confidence 6 3333222 23333 7899999999999999999998863
No 135
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=28.72 E-value=38 Score=30.79 Aligned_cols=38 Identities=13% Similarity=0.125 Sum_probs=29.0
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecC
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY 109 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~ 109 (576)
|||++ |.. + .-|-.+.+..+|.+|+++|.+|.+|-.+.
T Consensus 1 mkI~v-s~k--G---GvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAV-AGK--G---GVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp CEEEE-ECS--S---SHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred CEEEE-ecC--C---CCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 78888 631 1 23456778899999999999999997765
No 136
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=28.64 E-value=2.4e+02 Score=22.96 Aligned_cols=65 Identities=15% Similarity=0.204 Sum_probs=41.7
Q ss_pred cCCEEEeCCCC-CCCcHHHHHHHHc---CCceEEe-Ccccc---ccccccccccccCCCCCcceeEeCCCCHHHHHHHHH
Q 008154 456 GCDILLMPSRF-EPCGLNQLYAMRY---GTIPVVH-ATGGL---RDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALR 527 (576)
Q Consensus 456 ~~Dv~v~ps~~-E~~g~s~lEAma~---G~pvIat-~~gg~---~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~ 527 (576)
..|+++.-... +.-|+.+++.+.. .+|+|.. ..... .+.+.. |..+++..|-+.+++.+.|.
T Consensus 83 ~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~~----------g~~~~l~KP~~~~~l~~~i~ 152 (157)
T 3hzh_A 83 NIDIVTLXITMPKMDGITCLSNIMEFDKNARVIMISALGKEQLVKDCLIK----------GAKTFIVKPLDRAKVLQRVM 152 (157)
T ss_dssp GCCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEEEESCCCHHHHHHHHHT----------TCSEEEESSCCHHHHHHHHH
T ss_pred CCCEEEEeccCCCccHHHHHHHHHhhCCCCcEEEEeccCcHHHHHHHHHc----------CCCEEEeCCCCHHHHHHHHH
Confidence 45888775543 4556776665543 5677763 32222 233333 78899999999999888887
Q ss_pred HHH
Q 008154 528 FAI 530 (576)
Q Consensus 528 ~~l 530 (576)
.++
T Consensus 153 ~~l 155 (157)
T 3hzh_A 153 SVF 155 (157)
T ss_dssp HTT
T ss_pred HHh
Confidence 764
No 137
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=28.49 E-value=2.1e+02 Score=22.29 Aligned_cols=67 Identities=9% Similarity=0.036 Sum_probs=45.7
Q ss_pred cCCEEEeCCCC-CCCcHHHHHHHH-----cCCceEEe-Cccc---cccccccccccccCCCCCcceeEeCCCCHHHHHHH
Q 008154 456 GCDILLMPSRF-EPCGLNQLYAMR-----YGTIPVVH-ATGG---LRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTA 525 (576)
Q Consensus 456 ~~Dv~v~ps~~-E~~g~s~lEAma-----~G~pvIat-~~gg---~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~ 525 (576)
..|+++.-... +..|...++.+. ..+|+|.. .... ..+.+.. |..+++..|-+.+++.+.
T Consensus 55 ~~dlvi~d~~~~~~~g~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~~----------g~~~~l~kP~~~~~l~~~ 124 (140)
T 1k68_A 55 RPDLILLXLNLPKKDGREVLAEIKSDPTLKRIPVVVLSTSINEDDIFHSYDL----------HVNCYITKSANLSQLFQI 124 (140)
T ss_dssp CCSEEEECSSCSSSCHHHHHHHHHHSTTGGGSCEEEEESCCCHHHHHHHHHT----------TCSEEEECCSSHHHHHHH
T ss_pred CCcEEEEecCCCcccHHHHHHHHHcCcccccccEEEEecCCcHHHHHHHHHh----------chhheecCCCCHHHHHHH
Confidence 47888876543 456777777765 35677763 3322 2233333 778999999999999999
Q ss_pred HHHHHHH
Q 008154 526 LRFAIRT 532 (576)
Q Consensus 526 i~~~l~~ 532 (576)
|..++..
T Consensus 125 i~~~~~~ 131 (140)
T 1k68_A 125 VKGIEEF 131 (140)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9988763
No 138
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=28.23 E-value=42 Score=34.34 Aligned_cols=39 Identities=15% Similarity=0.241 Sum_probs=32.3
Q ss_pred CceEEEEeeccCCccccCcHHHHHhhHHHHHHhC--CCcEEEEEecC
Q 008154 65 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR--GHRVMVVSPRY 109 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~--G~~V~vi~~~~ 109 (576)
+++|+++. +| ..|--.=+.++|+.|+++ ||+|+++++..
T Consensus 9 ~~~vv~~p---~p---~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~ 49 (463)
T 2acv_A 9 NSELIFIP---AP---GIGHLASALEFAKLLTNHDKNLYITVFCIKF 49 (463)
T ss_dssp CEEEEEEC---CS---STTTHHHHHHHHHHHHHTCTTEEEEEEECCC
T ss_pred CCEEEEEc---Cc---ccchHHHHHHHHHHHHhcCCCcEEEEEEcCC
Confidence 47899985 34 477777889999999998 99999998764
No 139
>2r4q_A Phosphotransferase system (PTS) fructose-specific iiabc component; fructose specific IIB subunit, PF structural genomics, PSI-2; HET: MSE; 1.60A {Bacillus subtilis subsp} SCOP: c.44.2.2
Probab=28.22 E-value=68 Score=25.38 Aligned_cols=40 Identities=20% Similarity=0.141 Sum_probs=25.5
Q ss_pred CceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEe
Q 008154 65 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~ 107 (576)
.|||+-++. || ...-=....+..|-++..++||++.|=+-
T Consensus 2 ~~kivaVTa--Cp-tGiAhTymAaeaL~~aA~~~G~~ikVEtq 41 (106)
T 2r4q_A 2 NAKILAVTA--CP-TGIAHTFMAADALKEKAKELGVEIKVETN 41 (106)
T ss_dssp -CCEEEEEE--CS-CC--CHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred CceEEEEec--CC-CcHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 478999987 78 21222234455666777779999998653
No 140
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=28.13 E-value=48 Score=31.43 Aligned_cols=38 Identities=21% Similarity=0.196 Sum_probs=27.2
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCC
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFN 111 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~ 111 (576)
|||+..+....- +-| +..|+++|++.| +|+||+|...+
T Consensus 1 M~ILlTNDDGi~---ApG----i~aL~~aL~~~g-~V~VVAP~~~q 38 (280)
T 1l5x_A 1 MKILVTNDDGVH---SPG----LRLLYQFALSLG-DVDVVAPESPK 38 (280)
T ss_dssp CEEEEECSSCTT---CHH----HHHHHHHHGGGS-EEEEEEESSCT
T ss_pred CeEEEEcCCCCC---cHh----HHHHHHHHHhCC-CEEEEecCCCC
Confidence 788887765321 223 566778888888 89999998665
No 141
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=28.10 E-value=1.2e+02 Score=27.30 Aligned_cols=33 Identities=15% Similarity=0.163 Sum_probs=22.4
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCC--cEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGH--RVMVVSP 107 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~--~V~vi~~ 107 (576)
|||+++. .|.+..+..+.+++.+.++ +|..|..
T Consensus 2 ~rI~vl~---------SG~g~~~~~~l~~l~~~~~~~~i~~Vvs 36 (216)
T 2ywr_A 2 LKIGVLV---------SGRGSNLQAIIDAIESGKVNASIELVIS 36 (216)
T ss_dssp EEEEEEE---------CSCCHHHHHHHHHHHTTSSCEEEEEEEE
T ss_pred CEEEEEE---------eCCcHHHHHHHHHHHhCCCCCeEEEEEe
Confidence 6888884 3334567788888888887 5555543
No 142
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=27.98 E-value=48 Score=29.42 Aligned_cols=26 Identities=38% Similarity=0.631 Sum_probs=19.3
Q ss_pred CcHHHHHhhHHHHHHhCCCcEEEEEe
Q 008154 82 GGLGDVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 82 GG~~~~~~~la~~l~~~G~~V~vi~~ 107 (576)
||.|..-..+++.|.+.|++|.++..
T Consensus 7 Ga~G~~G~~ia~~l~~~g~~V~~~~r 32 (212)
T 1jay_A 7 GGTGNLGKGLALRLATLGHEIVVGSR 32 (212)
T ss_dssp TTTSHHHHHHHHHHHTTTCEEEEEES
T ss_pred cCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 33455556778899999999988764
No 143
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=27.94 E-value=59 Score=25.23 Aligned_cols=32 Identities=25% Similarity=0.386 Sum_probs=22.1
Q ss_pred CceEEEEeeccCCccccCcHHHHHhhHHHHHHhCC-CcEEEEEe
Q 008154 65 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG-HRVMVVSP 107 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G-~~V~vi~~ 107 (576)
+|+|+.+. .|++| ..+++.|.+.| ++|+++..
T Consensus 5 ~~~v~I~G--------~G~iG---~~~~~~l~~~g~~~v~~~~r 37 (118)
T 3ic5_A 5 RWNICVVG--------AGKIG---QMIAALLKTSSNYSVTVADH 37 (118)
T ss_dssp CEEEEEEC--------CSHHH---HHHHHHHHHCSSEEEEEEES
T ss_pred cCeEEEEC--------CCHHH---HHHHHHHHhCCCceEEEEeC
Confidence 46777662 25555 55778888899 88888764
No 144
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=27.28 E-value=76 Score=26.20 Aligned_cols=28 Identities=29% Similarity=0.449 Sum_probs=24.4
Q ss_pred cCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 81 TGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 81 ~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
.|....++..+++.+.+.|++|.++-..
T Consensus 12 tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 39 (148)
T 3f6r_A 12 TGNTESIAQKLEELIAAGGHEVTLLNAA 39 (148)
T ss_dssp SSHHHHHHHHHHHHHHTTTCEEEEEETT
T ss_pred CchHHHHHHHHHHHHHhCCCeEEEEehh
Confidence 5888999999999999999999988643
No 145
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=27.07 E-value=1.1e+02 Score=28.67 Aligned_cols=45 Identities=24% Similarity=0.405 Sum_probs=33.0
Q ss_pred CCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCC
Q 008154 63 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFN 111 (576)
Q Consensus 63 ~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~ 111 (576)
++++||..|+.. -| .-|-.+.+..||.+|++.|.+|.+|-.+...
T Consensus 79 ~~~~kvI~vts~-kg---G~GKTt~a~nLA~~lA~~G~rVLLID~D~~~ 123 (271)
T 3bfv_A 79 DSAVQSIVITSE-AP---GAGKSTIAANLAVAYAQAGYKTLIVDGDMRK 123 (271)
T ss_dssp TCCCCEEEEECS-ST---TSSHHHHHHHHHHHHHHTTCCEEEEECCSSS
T ss_pred CCCCeEEEEECC-CC---CCcHHHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 345677766642 12 2467789999999999999999999766443
No 146
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=27.06 E-value=61 Score=28.10 Aligned_cols=43 Identities=5% Similarity=-0.106 Sum_probs=32.2
Q ss_pred ccCCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEe-cCCC
Q 008154 61 QTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP-RYFN 111 (576)
Q Consensus 61 ~~~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~-~~~~ 111 (576)
..++.-+++.+|. .|..-...++|+.+.++|++|+.||+ .+..
T Consensus 74 ~i~~~D~vii~S~--------Sg~n~~~ie~A~~ake~G~~vIaITs~~~~~ 117 (170)
T 3jx9_A 74 TLHAVDRVLIFTP--------DTERSDLLASLARYDAWHTPYSIITLGDVTE 117 (170)
T ss_dssp CCCTTCEEEEEES--------CSCCHHHHHHHHHHHHHTCCEEEEESSCCCT
T ss_pred CCCCCCEEEEEeC--------CCCCHHHHHHHHHHHHCCCcEEEEeCcchhc
Confidence 3345566777764 44556678999999999999999998 5433
No 147
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=26.84 E-value=2.5e+02 Score=22.63 Aligned_cols=108 Identities=8% Similarity=0.056 Sum_probs=61.3
Q ss_pred CcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHh--cCCEEEeCCCC-CCCcHHHHHHHH---cCCceE
Q 008154 411 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSRF-EPCGLNQLYAMR---YGTIPV 484 (576)
Q Consensus 411 ~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~--~~Dv~v~ps~~-E~~g~s~lEAma---~G~pvI 484 (576)
+.+++++.+.+.........+. .....+.... +...+...+. ..|+++.-... +.-|...++.+. ..+|+|
T Consensus 3 ~~~ILivdd~~~~~~~l~~~L~-~~g~~v~~~~--~~~~a~~~l~~~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii 79 (155)
T 1qkk_A 3 APSVFLIDDDRDLRKAMQQTLE-LAGFTVSSFA--SATEALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMI 79 (155)
T ss_dssp -CEEEEECSCHHHHHHHHHHHH-HTTCEEEEES--CHHHHHHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEE
T ss_pred CCEEEEEeCCHHHHHHHHHHHH-HcCcEEEEEC--CHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEE
Confidence 3466777765432233333333 3333333222 3333333332 46888775443 456777766654 367777
Q ss_pred Ee-Cccc---cccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHH
Q 008154 485 VH-ATGG---LRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 485 at-~~gg---~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
.. .... ..+.+.. |..+++..|-+.+++...|..++.
T Consensus 80 ~ls~~~~~~~~~~~~~~----------g~~~~l~kP~~~~~L~~~i~~~~~ 120 (155)
T 1qkk_A 80 LVTGHGDIPMAVQAIQD----------GAYDFIAKPFAADRLVQSARRAEE 120 (155)
T ss_dssp EEECGGGHHHHHHHHHT----------TCCEEEESSCCHHHHHHHHHHHHH
T ss_pred EEECCCChHHHHHHHhc----------CCCeEEeCCCCHHHHHHHHHHHHH
Confidence 63 3322 2233333 778999999999999999998876
No 148
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=26.40 E-value=2.1e+02 Score=25.12 Aligned_cols=42 Identities=10% Similarity=-0.174 Sum_probs=23.9
Q ss_pred HHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceE
Q 008154 397 IDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYR 440 (576)
Q Consensus 397 ~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~ 440 (576)
...+++|+.+.++..-++-++|..+ .....+.+.+.+..++.
T Consensus 80 ~~Dil~al~~a~~~~~kIavvg~~~--~~~~~~~~~~ll~~~i~ 121 (196)
T 2q5c_A 80 RFDTMRAVYNAKRFGNELALIAYKH--SIVDKHEIEAMLGVKIK 121 (196)
T ss_dssp HHHHHHHHHHHGGGCSEEEEEEESS--CSSCHHHHHHHHTCEEE
T ss_pred HhHHHHHHHHHHhhCCcEEEEeCcc--hhhHHHHHHHHhCCceE
Confidence 4567788877766444777778764 12223444444444443
No 149
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=26.35 E-value=1.1e+02 Score=28.24 Aligned_cols=45 Identities=27% Similarity=0.321 Sum_probs=34.5
Q ss_pred hhccCCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEe
Q 008154 59 KAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 59 ~~~~~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~ 107 (576)
..+..+.|+.+||+..-. --|=.+++.-|+++|+++|.+|..+=|
T Consensus 19 ~~~~~~~m~~i~Itgt~t----~vGKT~vt~gL~~~l~~~G~~V~~fKP 63 (251)
T 3fgn_A 19 NLYFQSHMTILVVTGTGT----GVGKTVVCAALASAARQAGIDVAVCKP 63 (251)
T ss_dssp ---CCSSCEEEEEEESST----TSCHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHhcccCCCEEEEEeCCC----CCcHHHHHHHHHHHHHHCCCeEEEEee
Confidence 345567789999987522 367888999999999999999999865
No 150
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=26.19 E-value=52 Score=34.13 Aligned_cols=34 Identities=21% Similarity=0.423 Sum_probs=25.6
Q ss_pred CceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 65 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
+|+|+.+.. +|++| ..+++.|.+.||+|++++-.
T Consensus 147 ~m~VLVTGa-------tG~IG---~~l~~~L~~~G~~V~~l~R~ 180 (516)
T 3oh8_A 147 PLTVAITGS-------RGLVG---RALTAQLQTGGHEVIQLVRK 180 (516)
T ss_dssp CCEEEEEST-------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECC-------CCHHH---HHHHHHHHHCCCEEEEEECC
Confidence 688887732 46666 55788889999999998754
No 151
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=26.18 E-value=2.3e+02 Score=22.00 Aligned_cols=107 Identities=10% Similarity=0.095 Sum_probs=59.9
Q ss_pred cEEEEEeCCChhhHHHHHHHHHHhcCceE-EEccCChhHHHHHH--hcCCEEEeCCCC-CCCcHHHHHHHHc---CCceE
Q 008154 412 IQFVMLGSGDPQFESWMRDTEATYKDKYR-GWVGFNVPISHRIT--AGCDILLMPSRF-EPCGLNQLYAMRY---GTIPV 484 (576)
Q Consensus 412 ~~lii~G~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll--~~~Dv~v~ps~~-E~~g~s~lEAma~---G~pvI 484 (576)
++++++.+.+ ......+.+-+.....++ ...+... +...+ ...|+++.-... +.-|...++.+.. ..|+|
T Consensus 2 ~~ilivdd~~-~~~~~l~~~L~~~g~~v~~~~~~~~~--a~~~~~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii 78 (134)
T 3f6c_A 2 LNAIIIDDHP-LAIAAIRNLLIKNDIEILAELTEGGS--AVQRVETLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIII 78 (134)
T ss_dssp EEEEEECCCH-HHHHHHHHHHHHTTEEEEEEESSSTT--HHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEE
T ss_pred eEEEEEcCCH-HHHHHHHHHHhhCCcEEEEEcCCHHH--HHHHHHhcCCCEEEEecCCCCCChHHHHHHHHhcCCCCeEE
Confidence 4566776653 333333333233333333 2222222 22233 467888876553 4567777776654 45666
Q ss_pred E-eCccc---cccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHH
Q 008154 485 V-HATGG---LRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 485 a-t~~gg---~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
. |.... ..+.+.. |..+++..|-+.+++.++|..++.
T Consensus 79 ~~s~~~~~~~~~~~~~~----------g~~~~l~kp~~~~~l~~~i~~~~~ 119 (134)
T 3f6c_A 79 IVSAKNDHFYGKHCADA----------GANGFVSKKEGMNNIIAAIEAAKN 119 (134)
T ss_dssp EEECC---CTHHHHHHT----------TCSEEEEGGGCTHHHHHHHHHHHT
T ss_pred EEeCCCChHHHHHHHHh----------CCCEEEeCCCCHHHHHHHHHHHHC
Confidence 5 33222 2233343 788999999999999999988875
No 152
>1toa_A Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC trans binding protein; 1.80A {Treponema pallidum} SCOP: c.92.2.2 PDB: 1k0f_A
Probab=25.69 E-value=1.2e+02 Score=29.01 Aligned_cols=88 Identities=9% Similarity=-0.013 Sum_probs=51.0
Q ss_pred HHHhcCCEEEeCCC-CCCCcHHHHHHHHcCCc-eEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHH
Q 008154 452 RITAGCDILLMPSR-FEPCGLNQLYAMRYGTI-PVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFA 529 (576)
Q Consensus 452 ~ll~~~Dv~v~ps~-~E~~g~s~lEAma~G~p-vIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~ 529 (576)
.-++.||++|.... +|+|--.++++... .+ +|....| +. .+.. ..... .+..-.-|+ +|.+...+++.|.+.
T Consensus 83 ~~l~~ADlvv~~G~~lE~w~~~~~~~~~~-~~~~v~~s~~-i~-~~~~-~~~~~-~~~DPHvWl-dp~n~~~~a~~I~~~ 156 (313)
T 1toa_A 83 EWLGNADLILYNGLHLETKMGEVFSKLRG-SRLVVAVSET-IP-VSQR-LSLEE-AEFDPHVWF-DVKLWSYSVKAVYES 156 (313)
T ss_dssp HHHHHCSEEEECCTTCSTTCHHHHHHHTT-SSEEEEGGGG-SC-GGGS-CBSTT-SCBCCCGGG-SHHHHHHHHHHHHHH
T ss_pred HHHHcCCEEEEcCCCcHHHHHHHHHhccC-CCeEEEeecC-cc-cccc-cccCC-CCCCCceeC-CHHHHHHHHHHHHHH
Confidence 46899999999886 79998899988764 34 4543332 21 1100 00000 000122343 666778888888888
Q ss_pred HHHhhhCHHHHHHHHHHH
Q 008154 530 IRTYREHKSSWEGLMRRG 547 (576)
Q Consensus 530 l~~~~~~~~~~~~~~~~a 547 (576)
|... ||+......+++
T Consensus 157 L~~~--DP~~a~~Y~~N~ 172 (313)
T 1toa_A 157 LCKL--LPGKTREFTQRY 172 (313)
T ss_dssp HHHH--CGGGHHHHHHHH
T ss_pred HHHH--ChhhHHHHHHHH
Confidence 8754 665554444443
No 153
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=25.67 E-value=44 Score=32.90 Aligned_cols=38 Identities=26% Similarity=0.377 Sum_probs=26.0
Q ss_pred hhccCCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEe
Q 008154 59 KAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 59 ~~~~~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~ 107 (576)
+.|...+|||+++. .|.+| ..++..|++.||+|.++..
T Consensus 23 ~~m~~~~mkI~VIG--------aG~mG---~alA~~La~~G~~V~l~~r 60 (356)
T 3k96_A 23 NAMEPFKHPIAILG--------AGSWG---TALALVLARKGQKVRLWSY 60 (356)
T ss_dssp ----CCCSCEEEEC--------CSHHH---HHHHHHHHTTTCCEEEECS
T ss_pred hcccccCCeEEEEC--------ccHHH---HHHHHHHHHCCCeEEEEeC
Confidence 34555678999984 25555 4578889999999999864
No 154
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=25.65 E-value=2.8e+02 Score=25.07 Aligned_cols=104 Identities=12% Similarity=-0.119 Sum_probs=54.6
Q ss_pred HHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEeCCCCCCCcHHHHHH
Q 008154 397 IDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYA 476 (576)
Q Consensus 397 ~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~ps~~E~~g~s~lEA 476 (576)
...+++|+.+.++..-++-++|..+ .....+.+.+.+..++....-.+.+..... +.++
T Consensus 92 ~~Dil~aL~~a~~~~~kIavVg~~~--~~~~~~~i~~ll~~~i~~~~~~~~ee~~~~-------------------i~~l 150 (225)
T 2pju_A 92 GYDVLQFLAKAGKLTSSIGVVTYQE--TIPALVAFQKTFNLRLDQRSYITEEDARGQ-------------------INEL 150 (225)
T ss_dssp HHHHHHHHHHTTCTTSCEEEEEESS--CCHHHHHHHHHHTCCEEEEEESSHHHHHHH-------------------HHHH
T ss_pred HHHHHHHHHHHHhhCCcEEEEeCch--hhhHHHHHHHHhCCceEEEEeCCHHHHHHH-------------------HHHH
Confidence 4567888888877545777788764 233445566666656554332244444332 2333
Q ss_pred HHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHh
Q 008154 477 MRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTY 533 (576)
Q Consensus 477 ma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~ 533 (576)
...|+=+|..+... .+.... -|-+++++. + .+++.+++.+++...
T Consensus 151 ~~~G~~vVVG~~~~-~~~A~~---------~Gl~~vlI~-s-~eSI~~Ai~eA~~l~ 195 (225)
T 2pju_A 151 KANGTEAVVGAGLI-TDLAEE---------AGMTGIFIY-S-AATVRQAFSDALDMT 195 (225)
T ss_dssp HHTTCCEEEESHHH-HHHHHH---------TTSEEEESS-C-HHHHHHHHHHHHHHH
T ss_pred HHCCCCEEECCHHH-HHHHHH---------cCCcEEEEC-C-HHHHHHHHHHHHHHH
Confidence 44444443332211 122222 144566665 3 677777777776533
No 155
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=25.53 E-value=2.6e+02 Score=22.45 Aligned_cols=66 Identities=15% Similarity=0.197 Sum_probs=43.7
Q ss_pred cCCEEEeCCCC-CCCcHHHHHHHH---cCCceEEeCcccc----ccccccccccccCCCCC-cceeEeCCCCHHHHHHHH
Q 008154 456 GCDILLMPSRF-EPCGLNQLYAMR---YGTIPVVHATGGL----RDTVENFNPFAREGSGE-GTGWSFLPLSEESMLTAL 526 (576)
Q Consensus 456 ~~Dv~v~ps~~-E~~g~s~lEAma---~G~pvIat~~gg~----~e~i~~~~~~~~~~~~~-~~G~~~~~~d~~~la~~i 526 (576)
..|++|.-... +.-|..+++.+. ..+|+|......- .+.+.. | ..+++..|-+.+++..+|
T Consensus 58 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~----------g~~~~~l~KP~~~~~l~~~i 127 (153)
T 3hv2_A 58 EVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDPDLKLIAKAINE----------GEIYRYLSKPWDDQELLLAL 127 (153)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCCCHHHHHHHHHT----------TCCSEEECSSCCHHHHHHHH
T ss_pred CCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCCCHHHHHHHHhC----------CCcceEEeCCCCHHHHHHHH
Confidence 46887765443 456777766654 3677776432222 223333 5 678999999999999999
Q ss_pred HHHHH
Q 008154 527 RFAIR 531 (576)
Q Consensus 527 ~~~l~ 531 (576)
..++.
T Consensus 128 ~~~l~ 132 (153)
T 3hv2_A 128 RQALE 132 (153)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98876
No 156
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=25.31 E-value=59 Score=30.26 Aligned_cols=38 Identities=24% Similarity=0.288 Sum_probs=27.0
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCC
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFN 111 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~ 111 (576)
|||+..+....- +-| +..|+++|++.| +|+||+|...+
T Consensus 2 M~ILlTNDDGi~---apG----i~aL~~~L~~~g-~V~VVAP~~~~ 39 (254)
T 2v4n_A 2 MRILLSNDDGVH---APG----IQTLAKALREFA-DVQVVAPDRNR 39 (254)
T ss_dssp CEEEEECSSCTT---CHH----HHHHHHHHTTTS-EEEEEEESSCC
T ss_pred CeEEEEcCCCCC---CHH----HHHHHHHHHhCC-cEEEEeeCCCC
Confidence 889888765321 223 566778888876 99999998665
No 157
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=25.07 E-value=2.5e+02 Score=22.08 Aligned_cols=107 Identities=13% Similarity=0.065 Sum_probs=58.8
Q ss_pred CcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHh--cCCEEEeCCCCC-CCcHHHHHHHH---cCCceE
Q 008154 411 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSRFE-PCGLNQLYAMR---YGTIPV 484 (576)
Q Consensus 411 ~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~--~~Dv~v~ps~~E-~~g~s~lEAma---~G~pvI 484 (576)
..+++++.+.+ ......+..-+....++.... +...+...+. ..|+++.-. .. .-|...++.+. ..+|+|
T Consensus 4 ~~~iLivdd~~-~~~~~l~~~L~~~g~~v~~~~--~~~~a~~~l~~~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii 79 (142)
T 2qxy_A 4 TPTVMVVDESR-ITFLAVKNALEKDGFNVIWAK--NEQEAFTFLRREKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVA 79 (142)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHGGGTCEEEEES--SHHHHHHHHTTSCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEE
T ss_pred CCeEEEEeCCH-HHHHHHHHHHHhCCCEEEEEC--CHHHHHHHHhccCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEE
Confidence 35667776653 233333332222333333222 3333334443 468887755 32 34555555543 257777
Q ss_pred Ee-Ccccc---ccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHH
Q 008154 485 VH-ATGGL---RDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 485 at-~~gg~---~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
.. ..... .+.+.. |..+++..|-+.+++.+.|..++.
T Consensus 80 ~ls~~~~~~~~~~~~~~----------g~~~~l~kP~~~~~l~~~i~~~~~ 120 (142)
T 2qxy_A 80 VLSAYVDKDLIINSVKA----------GAVDYILKPFRLDYLLERVKKIIS 120 (142)
T ss_dssp EEESCCCHHHHHHHHHH----------TCSCEEESSCCHHHHHHHHHHHHH
T ss_pred EEECCCCHHHHHHHHHC----------CcceeEeCCCCHHHHHHHHHHHHh
Confidence 63 33222 223333 678999999999999999998875
No 158
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=24.96 E-value=36 Score=32.48 Aligned_cols=36 Identities=28% Similarity=0.376 Sum_probs=23.8
Q ss_pred hccCCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhC-----C-CcEEEEE
Q 008154 60 AQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR-----G-HRVMVVS 106 (576)
Q Consensus 60 ~~~~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~-----G-~~V~vi~ 106 (576)
.|...+|||+++. .|.+|. -++..|++. | |+|+++.
T Consensus 3 ~m~~~~m~I~iiG--------~G~mG~---~~a~~L~~~~~~~~g~~~V~~~~ 44 (317)
T 2qyt_A 3 AMNQQPIKIAVFG--------LGGVGG---YYGAMLALRAAATDGLLEVSWIA 44 (317)
T ss_dssp ----CCEEEEEEC--------CSHHHH---HHHHHHHHHHHHTTSSEEEEEEC
T ss_pred CCCCCCCEEEEEC--------cCHHHH---HHHHHHHhCccccCCCCCEEEEE
Confidence 4556679999984 366664 456677777 9 9999885
No 159
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=24.81 E-value=57 Score=31.24 Aligned_cols=34 Identities=21% Similarity=0.305 Sum_probs=25.0
Q ss_pred CCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEe
Q 008154 63 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 63 ~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~ 107 (576)
..+|||+++. +|.+-..+++.|++.||+|+++..
T Consensus 19 ~~m~~I~iIG-----------~G~mG~~~A~~l~~~G~~V~~~dr 52 (310)
T 3doj_A 19 SHMMEVGFLG-----------LGIMGKAMSMNLLKNGFKVTVWNR 52 (310)
T ss_dssp CCSCEEEEEC-----------CSHHHHHHHHHHHHTTCEEEEECS
T ss_pred ccCCEEEEEC-----------ccHHHHHHHHHHHHCCCeEEEEeC
Confidence 4568999983 233446678889999999998753
No 160
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=24.78 E-value=95 Score=34.02 Aligned_cols=46 Identities=7% Similarity=0.112 Sum_probs=34.4
Q ss_pred CHHHHHHHHHHHHHHhhhCHHHHHHHHHHHHh--hhCCHHHHHHHHHH
Q 008154 518 SEESMLTALRFAIRTYREHKSSWEGLMRRGME--KDYTWENAAIQYEQ 563 (576)
Q Consensus 518 d~~~la~~i~~~l~~~~~~~~~~~~~~~~a~~--~~fs~~~~~~~y~~ 563 (576)
|.++..++=+++...++.|++.|.+++...++ -.||.++++++|.+
T Consensus 736 Df~~y~~~q~~v~~~y~~d~~~W~~~~i~nia~~g~FssdRti~eY~~ 783 (796)
T 2c4m_A 736 DFADYRETRDRMAADYASDPLGWARMAWINICESGRFSSDRTIRDYAT 783 (796)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGGBHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhcCccCchHHHHHHHH
Confidence 44444444455555665799999999998854 48999999999976
No 161
>2r48_A Phosphotransferase system (PTS) mannose-specific iibca component; PTS system, fructose specific IIB PFAM02379, PSI-2, MCSG; 1.80A {Bacillus subtilis subsp} SCOP: c.44.2.2
Probab=24.72 E-value=79 Score=24.99 Aligned_cols=38 Identities=18% Similarity=0.223 Sum_probs=25.8
Q ss_pred CceEEEEeeccCCccccCcHHHH--HhhHHHHHHhCCCcEEEEEe
Q 008154 65 SYNIVFVTAEAAPYSKTGGLGDV--CGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~~~GG~~~~--~~~la~~l~~~G~~V~vi~~ 107 (576)
.|||+-++. || .|=.-++ +..|-++..++||++.|=+-
T Consensus 2 ~~kivaVTa--Cp---tGiAhTymAaeaL~~aA~~~G~~ikVEtq 41 (106)
T 2r48_A 2 NAKLLAITS--CP---NGIAHTYMAAENLQKAADRLGVSIKVETQ 41 (106)
T ss_dssp CCEEEEEEE--CS---SCSHHHHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred CceEEEEec--CC---CcHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 478999987 78 3444333 44566666679999998653
No 162
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=24.67 E-value=54 Score=29.51 Aligned_cols=33 Identities=21% Similarity=0.435 Sum_probs=23.4
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~ 107 (576)
||+++|+. .+||+|. .+++.|.+.|++|.+++.
T Consensus 1 Mk~vlVTG------as~gIG~---~~a~~l~~~G~~V~~~~r 33 (230)
T 3guy_A 1 MSLIVITG------ASSGLGA---ELAKLYDAEGKATYLTGR 33 (230)
T ss_dssp --CEEEES------TTSHHHH---HHHHHHHHTTCCEEEEES
T ss_pred CCEEEEec------CCchHHH---HHHHHHHHCCCEEEEEeC
Confidence 56666653 2588885 578889999999988864
No 163
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=24.66 E-value=66 Score=28.89 Aligned_cols=35 Identities=26% Similarity=0.082 Sum_probs=27.9
Q ss_pred ceEEEEeeccCCccccCcHHHH--HhhHHHHHHhCCCcEEEEEec
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDV--CGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~--~~~la~~l~~~G~~V~vi~~~ 108 (576)
+||++-. +||...+ +.++.+.|.+.|++|.+|...
T Consensus 6 k~Illgi--------TGsiaayk~~~~ll~~L~~~g~eV~vv~T~ 42 (207)
T 3mcu_A 6 KRIGFGF--------TGSHCTYEEVMPHLEKLIAEGAEVRPVVSY 42 (207)
T ss_dssp CEEEEEE--------CSCGGGGTTSHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEEE--------EChHHHHHHHHHHHHHHHhCCCEEEEEEeh
Confidence 5676652 4777777 789999999999999999754
No 164
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=24.63 E-value=57 Score=31.94 Aligned_cols=25 Identities=32% Similarity=0.325 Sum_probs=19.2
Q ss_pred cCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 81 TGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 81 ~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
+|++| ..+++.|.+.|++|++++..
T Consensus 33 tG~iG---~~l~~~L~~~g~~V~~~~r~ 57 (375)
T 1t2a_A 33 TGQDG---SYLAEFLLEKGYEVHGIVRR 57 (375)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred CchHH---HHHHHHHHHCCCEEEEEECC
Confidence 46666 45678888999999998743
No 165
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=24.57 E-value=1.3e+02 Score=28.55 Aligned_cols=45 Identities=20% Similarity=0.369 Sum_probs=32.9
Q ss_pred CCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCC
Q 008154 63 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFN 111 (576)
Q Consensus 63 ~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~ 111 (576)
+.++||..|+.. -| .-|-.+.+..||.+|++.|.+|.+|-.+..+
T Consensus 101 ~~~~kvI~vts~-kg---G~GKTtva~nLA~~lA~~G~rVLLID~D~r~ 145 (299)
T 3cio_A 101 ETENNILMITGA-TP---DSGKTFVSSTLAAVIAQSDQKVLFIDADLRR 145 (299)
T ss_dssp SCSCCEEEEEES-SS---SSCHHHHHHHHHHHHHHTTCCEEEEECCTTT
T ss_pred CCCCeEEEEECC-CC---CCChHHHHHHHHHHHHhCCCcEEEEECCCCC
Confidence 345666666542 12 2467789999999999999999999876543
No 166
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=24.51 E-value=2.4e+02 Score=21.59 Aligned_cols=66 Identities=17% Similarity=0.226 Sum_probs=43.0
Q ss_pred cCCEEEeCCCC-CCCcHHHHHHHH-----cCCceEEe-Ccccc---ccccccccccccCCCCCcceeEeCCCCHHHHHHH
Q 008154 456 GCDILLMPSRF-EPCGLNQLYAMR-----YGTIPVVH-ATGGL---RDTVENFNPFAREGSGEGTGWSFLPLSEESMLTA 525 (576)
Q Consensus 456 ~~Dv~v~ps~~-E~~g~s~lEAma-----~G~pvIat-~~gg~---~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~ 525 (576)
..|+++.-... +..|...++.+. ..+|+|.. ..... .+.+.. |..+++..|-+.+++.+.
T Consensus 46 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~----------ga~~~l~Kp~~~~~l~~~ 115 (127)
T 2jba_A 46 WPDLILLAWMLPGGSGIQFIKHLRRESMTRDIPVVMLTARGEEEDRVRGLET----------GADDCITKPFSPKELVAR 115 (127)
T ss_dssp CCSEEEEESEETTEEHHHHHHHHHTSTTTTTSCEEEEEETTHHHHHHTTCCC----------SCSEEEEESCCHHHHHHH
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHhCcccCCCCEEEEeCCCCHHHHHHHHhc----------CCCeEEeCCCCHHHHHHH
Confidence 46887764432 345777777775 35677763 33222 223333 778999999999999988
Q ss_pred HHHHHH
Q 008154 526 LRFAIR 531 (576)
Q Consensus 526 i~~~l~ 531 (576)
+..++.
T Consensus 116 i~~~~~ 121 (127)
T 2jba_A 116 IKAVMR 121 (127)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 887764
No 167
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=24.46 E-value=62 Score=28.95 Aligned_cols=36 Identities=17% Similarity=0.066 Sum_probs=28.1
Q ss_pred CceEEEEeeccCCccccCcHHHH--HhhHHHHHHhCCCcEEEEEec
Q 008154 65 SYNIVFVTAEAAPYSKTGGLGDV--CGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~~~GG~~~~--~~~la~~l~~~G~~V~vi~~~ 108 (576)
++||++-. +|+.+.+ +.++.+.|.+.|++|.+|...
T Consensus 7 ~k~I~lgi--------TGs~aa~~k~~~ll~~L~~~g~eV~vv~T~ 44 (201)
T 3lqk_A 7 GKHVGFGL--------TGSHCTYHEVLPQMERLVELGAKVTPFVTH 44 (201)
T ss_dssp TCEEEEEC--------CSCGGGGGGTHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEEE--------EChHHHHHHHHHHHHHHhhCCCEEEEEECh
Confidence 45676652 4666666 899999999999999999754
No 168
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=24.36 E-value=1.4e+02 Score=25.33 Aligned_cols=68 Identities=18% Similarity=0.180 Sum_probs=41.2
Q ss_pred cccCHH--HHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEEEeC
Q 008154 393 YQKGID--LIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMP 463 (576)
Q Consensus 393 ~~Kg~~--~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~v~p 463 (576)
.+|+.| +.+++++....-+.-+++.|+++ .....+.+++.+..++.++ ++.......+.+.||-|+.-
T Consensus 90 ~k~~~Dv~laiD~~~~a~~~d~~vLvSgD~D--F~plv~~lr~~~G~~V~v~-g~~~~~s~~L~~~ad~fi~l 159 (165)
T 2qip_A 90 AKGDWDVGITLDAIEIAPDVDRVILVSGDGD--FSLLVERIQQRYNKKVTVY-GVPRLTSQTLIDCADNFVAI 159 (165)
T ss_dssp CSCCCHHHHHHHHHHHGGGCSEEEEECCCGG--GHHHHHHHHHHHCCEEEEE-ECGGGSCHHHHHHSSEEEEC
T ss_pred cCCCccHHHHHHHHHhhccCCEEEEEECChh--HHHHHHHHHHHcCcEEEEE-eCCCcChHHHHHhCCEEEec
Confidence 345655 56677765433455556666654 7888888887534455433 33332345688999988753
No 169
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=24.31 E-value=94 Score=28.70 Aligned_cols=44 Identities=18% Similarity=0.079 Sum_probs=30.8
Q ss_pred hccCCCceEEEEeeccCCccccCcHH-HHHhhHHHHHHhCCCcEEEEEe
Q 008154 60 AQTRVSYNIVFVTAEAAPYSKTGGLG-DVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 60 ~~~~~~mkI~~~s~e~~P~~~~GG~~-~~~~~la~~l~~~G~~V~vi~~ 107 (576)
.+...+|||+.|+.. |. .+|.. .++..+++.+.+.|++|.++-+
T Consensus 29 ~~~~~~mkIliI~GS--~r--~~s~t~~La~~~~~~l~~~g~eve~idL 73 (247)
T 2q62_A 29 AFSTHRPRILILYGS--LR--TVSYSRLLAEEARRLLEFFGAEVKVFDP 73 (247)
T ss_dssp CCCCSCCEEEEEECC--CC--SSCHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred hccCCCCeEEEEEcc--CC--CCCHHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 344467899999875 42 35554 5566677788888999998854
No 170
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=24.28 E-value=63 Score=31.74 Aligned_cols=35 Identities=20% Similarity=0.255 Sum_probs=24.4
Q ss_pred CCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 64 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 64 ~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
++|+|+.+.. +|++| ..+++.|.+.||+|+++...
T Consensus 28 ~~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 62 (379)
T 2c5a_A 28 ENLKISITGA-------GGFIA---SHIARRLKHEGHYVIASDWK 62 (379)
T ss_dssp SCCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred cCCeEEEECC-------ccHHH---HHHHHHHHHCCCeEEEEECC
Confidence 4567766632 46666 55678888899999988743
No 171
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=24.12 E-value=2.7e+02 Score=23.52 Aligned_cols=108 Identities=14% Similarity=0.161 Sum_probs=62.3
Q ss_pred CcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHh--cCCEEEeCCC-CCCCcHHHHHHHHc---CCceE
Q 008154 411 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSR-FEPCGLNQLYAMRY---GTIPV 484 (576)
Q Consensus 411 ~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~--~~Dv~v~ps~-~E~~g~s~lEAma~---G~pvI 484 (576)
+.+++|+.+.+ ......+.+-+.....+... .+...+...+. ..|+++.--. -+.-|+.+++.+.. .+|+|
T Consensus 7 ~~~iLivdd~~-~~~~~l~~~L~~~g~~v~~~--~~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii 83 (184)
T 3rqi_A 7 DKNFLVIDDNE-VFAGTLARGLERRGYAVRQA--HNKDEALKLAGAEKFEFITVXLHLGNDSGLSLIAPLCDLQPDARIL 83 (184)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHHHTTCEEEEE--CSHHHHHHHHTTSCCSEEEECSEETTEESHHHHHHHHHHCTTCEEE
T ss_pred CCeEEEEcCCH-HHHHHHHHHHHHCCCEEEEe--CCHHHHHHHHhhCCCCEEEEeccCCCccHHHHHHHHHhcCCCCCEE
Confidence 35667776653 33333333323333333222 24444444543 4688876443 24567777776543 67777
Q ss_pred E-eCccc---cccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHH
Q 008154 485 V-HATGG---LRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 485 a-t~~gg---~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
. |.... ..+.+.. |..+++..|-+.+++.++|..++.
T Consensus 84 ~lt~~~~~~~~~~a~~~----------Ga~~~l~KP~~~~~L~~~i~~~~~ 124 (184)
T 3rqi_A 84 VLTGYASIATAVQAVKD----------GADNYLAKPANVESILAALQTNAS 124 (184)
T ss_dssp EEESSCCHHHHHHHHHH----------TCSEEEESSCCHHHHHHHTSTTHH
T ss_pred EEeCCCCHHHHHHHHHh----------CHHHheeCCCCHHHHHHHHHHHHH
Confidence 6 33332 2234444 788999999999999999988765
No 172
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=24.05 E-value=67 Score=27.89 Aligned_cols=33 Identities=24% Similarity=0.211 Sum_probs=23.8
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
|+|+.+.. +|++| ..+++.|.+.|++|.+++..
T Consensus 4 ~~ilVtGa-------tG~iG---~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 4 KKIAIFGA-------TGQTG---LTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CEEEEEST-------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEcC-------CcHHH---HHHHHHHHHCCCeEEEEEeC
Confidence 67776632 46666 55778888999999998743
No 173
>2m1z_A LMO0427 protein; homolog PTS system IIB component, transferase; NMR {Listeria monocytogenes egd-e}
Probab=23.99 E-value=1.2e+02 Score=23.93 Aligned_cols=39 Identities=23% Similarity=0.201 Sum_probs=26.2
Q ss_pred CceEEEEeeccCCccccCcHHHH--HhhHHHHHHhCCCcEEEEEec
Q 008154 65 SYNIVFVTAEAAPYSKTGGLGDV--CGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~~~GG~~~~--~~~la~~l~~~G~~V~vi~~~ 108 (576)
+|||+-++. || +|=.-++ +..|-++..++||++.|=+-.
T Consensus 2 ~mkivaVta--Cp---tGiAhTymAAeaLekaA~~~G~~ikVEtqg 42 (106)
T 2m1z_A 2 KRKIIAVTA--CA---TGVAHTYMAAQALKKGAKKMGNLIKVETQG 42 (106)
T ss_dssp CCEEEEEEE--CS---SCHHHHHHHHHHHHHHHHHHTCEEEEEEEE
T ss_pred CccEEEEEE--CC---CcHHHHHHHHHHHHHHHHHCCCEEEEEEec
Confidence 378988886 78 2333333 235666666799999998744
No 174
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=23.90 E-value=2.5e+02 Score=21.58 Aligned_cols=105 Identities=10% Similarity=0.067 Sum_probs=60.6
Q ss_pred EEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHh--cCCEEEeCCCC-CCCcHHHHHHHHc-----CCceE
Q 008154 413 QFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSRF-EPCGLNQLYAMRY-----GTIPV 484 (576)
Q Consensus 413 ~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~--~~Dv~v~ps~~-E~~g~s~lEAma~-----G~pvI 484 (576)
+++++.+. +......+..-+....++... .+...+...+. ..|+++.-... +.-|..+++.+.. .+|+|
T Consensus 4 ~ILivdd~-~~~~~~l~~~l~~~g~~v~~~--~~~~~al~~l~~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii 80 (122)
T 3gl9_A 4 KVLLVDDS-AVLRKIVSFNLKKEGYEVIEA--ENGQIALEKLSEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVI 80 (122)
T ss_dssp EEEEECSC-HHHHHHHHHHHHHTTCEEEEE--SSHHHHHHHHTTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEE
T ss_pred eEEEEeCC-HHHHHHHHHHHHHCCcEEEEe--CCHHHHHHHHHhcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEE
Confidence 45566654 333333333323333333322 24444444443 46888875443 4568888887743 57777
Q ss_pred E-eCccccc---cccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHH
Q 008154 485 V-HATGGLR---DTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAI 530 (576)
Q Consensus 485 a-t~~gg~~---e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l 530 (576)
. |..+... +.+.. |..+++..|-+.+++.+.+..++
T Consensus 81 ~~s~~~~~~~~~~~~~~----------Ga~~~l~KP~~~~~L~~~i~~~l 120 (122)
T 3gl9_A 81 VLTAKGGEEDESLALSL----------GARKVMRKPFSPSQFIEEVKHLL 120 (122)
T ss_dssp EEESCCSHHHHHHHHHT----------TCSEEEESSCCHHHHHHHHHHHH
T ss_pred EEecCCchHHHHHHHhc----------ChhhhccCCCCHHHHHHHHHHHh
Confidence 6 4333222 23333 78899999999999999888775
No 175
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=23.85 E-value=95 Score=26.28 Aligned_cols=37 Identities=14% Similarity=0.117 Sum_probs=28.6
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~ 107 (576)
|||+.+.. .+ .|....++..+++.|.+.|++|.++-.
T Consensus 1 Mkv~IvY~--S~---tGnT~~~A~~ia~~l~~~g~~v~~~~~ 37 (161)
T 3hly_A 1 MSVLIGYL--SD---YGYSDRLSQAIGRGLVKTGVAVEMVDL 37 (161)
T ss_dssp -CEEEEEC--TT---STTHHHHHHHHHHHHHHTTCCEEEEET
T ss_pred CEEEEEEE--CC---ChHHHHHHHHHHHHHHhCCCeEEEEEC
Confidence 56665532 23 599999999999999999999988854
No 176
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=23.60 E-value=89 Score=26.06 Aligned_cols=34 Identities=32% Similarity=0.426 Sum_probs=24.0
Q ss_pred CCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 64 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 64 ~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
..++|+.+. .|.+| ..+++.|.+.|++|+++...
T Consensus 18 ~~~~v~IiG--------~G~iG---~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 18 KSKYIVIFG--------CGRLG---SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CCCEEEEEC--------CSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCCcEEEEC--------CCHHH---HHHHHHHHhCCCeEEEEECC
Confidence 357788773 25555 45677888899999999754
No 177
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=23.23 E-value=1.3e+02 Score=27.36 Aligned_cols=30 Identities=17% Similarity=0.207 Sum_probs=25.1
Q ss_pred CcHHHHHhhHHHHHHhCCCcEEEEEecCCC
Q 008154 82 GGLGDVCGSLPVALAARGHRVMVVSPRYFN 111 (576)
Q Consensus 82 GG~~~~~~~la~~l~~~G~~V~vi~~~~~~ 111 (576)
-|-.+.+..+|.+|+++|.+|.+|-.+..+
T Consensus 14 vGKTt~a~~LA~~la~~g~~VlliD~D~~~ 43 (260)
T 3q9l_A 14 VGKTTSSAAIATGLAQKGKKTVVIDFAIGL 43 (260)
T ss_dssp SSHHHHHHHHHHHHHHTTCCEEEEECCCSS
T ss_pred CcHHHHHHHHHHHHHhCCCcEEEEECCCCC
Confidence 466788999999999999999999766533
No 178
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=23.17 E-value=3.8e+02 Score=23.39 Aligned_cols=112 Identities=10% Similarity=0.081 Sum_probs=63.1
Q ss_pred CcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHh--cCCEEEeCCCC-CCCcHHHHHHHH---cCCceE
Q 008154 411 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSRF-EPCGLNQLYAMR---YGTIPV 484 (576)
Q Consensus 411 ~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~--~~Dv~v~ps~~-E~~g~s~lEAma---~G~pvI 484 (576)
+.+++++.+.+ ........+-+.....+... .+...+...+. ..|+++.--.. +.-|..+++.+. ..+|+|
T Consensus 7 ~~~ilivdd~~-~~~~~l~~~L~~~g~~v~~~--~~~~~a~~~~~~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~~ii 83 (233)
T 1ys7_A 7 SPRVLVVDDDS-DVLASLERGLRLSGFEVATA--VDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 83 (233)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHHHTTCEEEEE--SSHHHHHHHHHHSCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEE
T ss_pred CCeEEEEeCCH-HHHHHHHHHHHhCCCEEEEE--CCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEE
Confidence 45677777653 33333333222233333322 23333333433 57888875443 456777777765 367877
Q ss_pred Ee-CccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHH
Q 008154 485 VH-ATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRT 532 (576)
Q Consensus 485 at-~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~ 532 (576)
.. ..........- .+.|..+++..|.+.+++.++|..++..
T Consensus 84 ~lt~~~~~~~~~~~-------~~~ga~~~l~Kp~~~~~L~~~i~~~~~~ 125 (233)
T 1ys7_A 84 VLSARSSVDDRVAG-------LEAGADDYLVKPFVLAELVARVKALLRR 125 (233)
T ss_dssp EEECCCTTTCCCTT-------TTTTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred EEEcCCCHHHHHHH-------HHcCCCEEEeCCCCHHHHHHHHHHHHhh
Confidence 63 33222221111 1127889999999999999999998763
No 179
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=23.15 E-value=61 Score=30.66 Aligned_cols=34 Identities=32% Similarity=0.454 Sum_probs=23.9
Q ss_pred CceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 65 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
+|+|+.+.. +|++| ..+++.|.+.||+|++++..
T Consensus 7 ~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 40 (321)
T 3vps_A 7 KHRILITGG-------AGFIG---GHLARALVASGEEVTVLDDL 40 (321)
T ss_dssp CCEEEEETT-------TSHHH---HHHHHHHHHTTCCEEEECCC
T ss_pred CCeEEEECC-------CChHH---HHHHHHHHHCCCEEEEEecC
Confidence 456766621 35566 56788899999999998643
No 180
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=23.07 E-value=2.2e+02 Score=25.36 Aligned_cols=35 Identities=14% Similarity=0.103 Sum_probs=23.4
Q ss_pred CceEEEEeeccCCccccCcHHHHHhhHHHHHHhC--CCcEEEEEec
Q 008154 65 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR--GHRVMVVSPR 108 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~--G~~V~vi~~~ 108 (576)
+|||+.+. .|.+..+..+.+++.+. +++|..|...
T Consensus 3 m~ki~vl~---------sG~g~~~~~~l~~l~~~~l~~~I~~Vit~ 39 (212)
T 3av3_A 3 MKRLAVFA---------SGSGTNFQAIVDAAKRGDLPARVALLVCD 39 (212)
T ss_dssp CEEEEEEC---------CSSCHHHHHHHHHHHTTCCCEEEEEEEES
T ss_pred CcEEEEEE---------ECCcHHHHHHHHHHHhCCCCCeEEEEEeC
Confidence 46888873 23345677778888876 6788766554
No 181
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=22.97 E-value=88 Score=26.52 Aligned_cols=92 Identities=11% Similarity=0.038 Sum_probs=47.5
Q ss_pred CEEEEeccccc-ccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEcc-CChhHHHHHHhcCCEE
Q 008154 383 PLIGFIGRLDY-QKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVG-FNVPISHRITAGCDIL 460 (576)
Q Consensus 383 ~~i~~~Gr~~~-~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ll~~~Dv~ 460 (576)
..|-++|.+.. ..+...+-++.+.|.+.. . ++. .+ -.+. .+............. +..+ ...+..||++
T Consensus 3 mkIYlAGP~f~~~e~~~~~~~i~~~L~~~G-~-Vl~--~h-v~~~---~l~~~g~~~~~~~~~i~~~d--~~~i~~aD~v 72 (152)
T 4fyk_A 3 RSVYFCGSIRGGREDQALYARIVSRLRRYG-K-VLT--EH-VADA---ELEPLGEEAAGGDQFIHEQN--LNWLQQADVV 72 (152)
T ss_dssp CEEEEECCSTTCCTTHHHHHHHHHHHTTTS-E-ECC--CC-----------------CCCHHHHHHHH--HHHHHHCSEE
T ss_pred ceEEEECCCCCcHHHHHHHHHHHHHHHHcC-c-ccc--cc-cCch---hhhhccccccCCHHHHHHHH--HHHHHHCCEE
Confidence 46788888865 456667777777776655 2 221 11 0000 010000000000000 1111 2578999999
Q ss_pred EeCCCCCCCcHHHHH---HHHcCCceEE
Q 008154 461 LMPSRFEPCGLNQLY---AMRYGTIPVV 485 (576)
Q Consensus 461 v~ps~~E~~g~s~lE---Ama~G~pvIa 485 (576)
|..-. ++-.-|..| |.+.|+||++
T Consensus 73 vA~l~-~~d~Gt~~EiG~A~algkPV~~ 99 (152)
T 4fyk_A 73 VAEVT-QPSLGVGYELGRAVALGKPILC 99 (152)
T ss_dssp EEECS-SCCHHHHHHHHHHHHTTCCEEE
T ss_pred EEeCC-CCCCCHHHHHHHHHHcCCeEEE
Confidence 98533 555555555 7899999999
No 182
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=22.88 E-value=48 Score=27.32 Aligned_cols=25 Identities=24% Similarity=0.243 Sum_probs=20.2
Q ss_pred HHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 84 LGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 84 ~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
.|.+-..+++.|.+.|++|+++...
T Consensus 15 ~G~~G~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 15 YGRVGSLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred cCHHHHHHHHHHHHCCCCEEEEECC
Confidence 3555677889999999999999754
No 183
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=22.76 E-value=87 Score=28.47 Aligned_cols=39 Identities=18% Similarity=0.147 Sum_probs=28.6
Q ss_pred CceEEEEeeccCCccccCc-HHHHHhhHHHHHHhCCCcEEEEEe
Q 008154 65 SYNIVFVTAEAAPYSKTGG-LGDVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~~~GG-~~~~~~~la~~l~~~G~~V~vi~~ 107 (576)
.|||+.|+.. |. .++ ...++...++.+.+.||+|.++-+
T Consensus 1 ~mkiLiI~gs--pr--~~S~t~~l~~~~~~~l~~~g~ev~~~dL 40 (228)
T 3tem_A 1 GKKVLIVYAH--QE--PKSFNGSLKNVAVDELSRQGCTVTVSDL 40 (228)
T ss_dssp CCEEEEEECC--SC--TTSHHHHHHHHHHHHHHHHTCEEEEEET
T ss_pred CCEEEEEEeC--CC--CCCHHHHHHHHHHHHHHHCCCEEEEEEh
Confidence 3899999874 52 344 456666677778788999999965
No 184
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=22.66 E-value=6e+02 Score=25.56 Aligned_cols=96 Identities=17% Similarity=0.083 Sum_probs=55.6
Q ss_pred EEeCCCCC-CCcHHHHHH-HHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCH
Q 008154 460 LLMPSRFE-PCGLNQLYA-MRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHK 537 (576)
Q Consensus 460 ~v~ps~~E-~~g~s~lEA-ma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~ 537 (576)
+|++-.-+ +-|-..+.+ ...|+|+.....|---+-+..|.+.. -..-++..+|...+.+..++.+. +.
T Consensus 244 VIlTKlD~~~~gG~~ls~~~~~g~PI~fig~Ge~vddL~~f~~~~------~~~~llg~gd~~~l~e~~~~~~~----~~ 313 (443)
T 3dm5_A 244 IIVTKLDGSAKGGGALSAVAATGAPIKFIGTGEKIDDIEPFDPPR------FVSRLLGLGDIQGLLEKFKELEK----EV 313 (443)
T ss_dssp EEEECCSSCSSHHHHHHHHHTTCCCEEEEECSSSTTCEEECCHHH------HHHHHTTTTCHHHHHHHHHHHHT----TH
T ss_pred EEEECCCCcccccHHHHHHHHHCCCEEEEEcCCChHHhhhCCHHH------HHHHHcCCCcHHHHHHHHHHhhh----hh
Confidence 55554432 333334443 35799997655553334455443322 23445567888888888888764 23
Q ss_pred HHHHHHHHHHHhhhCCHHHHHHHHHHHH
Q 008154 538 SSWEGLMRRGMEKDYTWENAAIQYEQVF 565 (576)
Q Consensus 538 ~~~~~~~~~a~~~~fs~~~~~~~y~~~y 565 (576)
+...++.++-.+.+|+.+.+.+++.++-
T Consensus 314 ~~~~~~~~k~~~~~f~l~d~~~q~~~~~ 341 (443)
T 3dm5_A 314 EIKEEDIERFLRGKFTLKDMYAQLEAMR 341 (443)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCcCHHHHHHHHHHHH
Confidence 2111254444556899999999887653
No 185
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=22.65 E-value=2.8e+02 Score=21.79 Aligned_cols=112 Identities=9% Similarity=0.034 Sum_probs=62.2
Q ss_pred CcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHh--cCCEEEeCCCC-CCCcHHHHHHHHc---CCceE
Q 008154 411 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSRF-EPCGLNQLYAMRY---GTIPV 484 (576)
Q Consensus 411 ~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~--~~Dv~v~ps~~-E~~g~s~lEAma~---G~pvI 484 (576)
+.+++|+.+.+.........+.......++... .+...+...+. ..|+++.-... +.-|..+++.+.. ..|+|
T Consensus 9 ~~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~-~~~~~al~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii 87 (143)
T 2qv0_A 9 KMKVIIVEDEFLAQQELSWLINTHSQMEIVGSF-DDGLDVLKFLQHNKVDAIFLDINIPSLDGVLLAQNISQFAHKPFIV 87 (143)
T ss_dssp -CEEEEECSCHHHHHHHHHHHHHHSCCEEEEEE-SCHHHHHHHHHHCCCSEEEECSSCSSSCHHHHHHHHTTSTTCCEEE
T ss_pred ceEEEEEcCCHHHHHHHHHHHHhCCCceEEEEe-CCHHHHHHHHHhCCCCEEEEecCCCCCCHHHHHHHHHccCCCceEE
Confidence 567777777643333333333333233322221 23333333433 47888876543 4567777777654 33444
Q ss_pred E-eCcc-ccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHh
Q 008154 485 V-HATG-GLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTY 533 (576)
Q Consensus 485 a-t~~g-g~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~ 533 (576)
. +... ...+.+.. |..+++..|-+.+++.+.|..++...
T Consensus 88 ~~s~~~~~~~~~~~~----------g~~~~l~KP~~~~~l~~~i~~~~~~~ 128 (143)
T 2qv0_A 88 FITAWKEHAVEAFEL----------EAFDYILKPYQESRIINMLQKLTTAW 128 (143)
T ss_dssp EEESCCTTHHHHHHT----------TCSEEEESSCCHHHHHHHHHHHHHHH
T ss_pred EEeCCHHHHHHHHhC----------CcceEEeCCCCHHHHHHHHHHHHHHH
Confidence 3 3322 12223333 77899999999999999999887643
No 186
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=22.54 E-value=29 Score=32.79 Aligned_cols=61 Identities=15% Similarity=0.060 Sum_probs=36.3
Q ss_pred HHHhcCCEEEeCCCCCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCC
Q 008154 452 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPL 517 (576)
Q Consensus 452 ~ll~~~Dv~v~ps~~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~ 517 (576)
.++..+|++|--+.-++.--.+..|+.+|+|+|+...|...+......... ...+.++.++
T Consensus 68 ~~l~~~DvVIDft~p~~~~~~~~~a~~~G~~vVigTtG~~~e~~~~L~~~a-----~~~~vv~a~N 128 (273)
T 1dih_A 68 AVKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIGTTGFDEAGKQAIRDAA-----ADIAIVFAAN 128 (273)
T ss_dssp TTTTSCSEEEECSCHHHHHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHT-----TTSCEEECSC
T ss_pred HHhcCCCEEEEcCChHHHHHHHHHHHhCCCCEEEECCCCCHHHHHHHHHhc-----CCCCEEEEec
Confidence 356789999944443333334567889999999966665554332211111 3457777664
No 187
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=22.47 E-value=1.5e+02 Score=26.51 Aligned_cols=30 Identities=33% Similarity=0.440 Sum_probs=25.1
Q ss_pred CcHHHHHhhHHHHHHhCCCcEEEEEecCCC
Q 008154 82 GGLGDVCGSLPVALAARGHRVMVVSPRYFN 111 (576)
Q Consensus 82 GG~~~~~~~la~~l~~~G~~V~vi~~~~~~ 111 (576)
-|-.+.+..+|.+|+++|.+|.+|-.+..+
T Consensus 14 vGKTt~a~~LA~~la~~g~~VlliD~D~~~ 43 (237)
T 1g3q_A 14 TGKTTVTANLSVALGDRGRKVLAVDGDLTM 43 (237)
T ss_dssp SSHHHHHHHHHHHHHHTTCCEEEEECCTTS
T ss_pred CCHHHHHHHHHHHHHhcCCeEEEEeCCCCC
Confidence 466788999999999999999999776543
No 188
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=22.39 E-value=68 Score=30.55 Aligned_cols=24 Identities=29% Similarity=0.387 Sum_probs=18.4
Q ss_pred cCcHHHHHhhHHHHHHhCCCcEEEEEe
Q 008154 81 TGGLGDVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 81 ~GG~~~~~~~la~~l~~~G~~V~vi~~ 107 (576)
+|++| ..+++.|.+.|++|+++..
T Consensus 10 tG~iG---~~l~~~L~~~g~~V~~~~r 33 (330)
T 2c20_A 10 AGYIG---SHAVKKLVDEGLSVVVVDN 33 (330)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEEC
T ss_pred CcHHH---HHHHHHHHhCCCEEEEEeC
Confidence 35555 5677888899999998864
No 189
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=22.11 E-value=73 Score=30.12 Aligned_cols=33 Identities=18% Similarity=0.311 Sum_probs=23.3
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
|+|+.+.. +|++| ..+++.|.+.|++|.+++..
T Consensus 3 ~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 35 (311)
T 3m2p_A 3 LKIAVTGG-------TGFLG---QYVVESIKNDGNTPIILTRS 35 (311)
T ss_dssp CEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECC-------CcHHH---HHHHHHHHhCCCEEEEEeCC
Confidence 56666521 35555 56788899999999998754
No 190
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=22.09 E-value=76 Score=31.26 Aligned_cols=39 Identities=13% Similarity=0.250 Sum_probs=28.3
Q ss_pred hhccCCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 59 KAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 59 ~~~~~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
.+|..++|||+++.. | .....+++++.++|++|.++.+.
T Consensus 5 ~pm~~~~~~ili~g~--------g---~~~~~~~~a~~~~G~~v~~~~~~ 43 (391)
T 1kjq_A 5 TALRPAATRVMLLGS--------G---ELGKEVAIECQRLGVEVIAVDRY 43 (391)
T ss_dssp CTTSTTCCEEEEESC--------S---HHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCCCCCCCEEEEECC--------C---HHHHHHHHHHHHcCCEEEEEECC
Confidence 355566789998842 2 23467899999999999888653
No 191
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=22.01 E-value=3.1e+02 Score=21.95 Aligned_cols=108 Identities=8% Similarity=0.090 Sum_probs=60.5
Q ss_pred CcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHh-c--CCEEEeCCC-CCCCcHHHHHHHHc---CCce
Q 008154 411 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA-G--CDILLMPSR-FEPCGLNQLYAMRY---GTIP 483 (576)
Q Consensus 411 ~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~-~--~Dv~v~ps~-~E~~g~s~lEAma~---G~pv 483 (576)
..+++|+.+.+.........+. . ...+... .+...+...+. . .|+++.-.. .+.-|..+++.+.. .+|+
T Consensus 4 ~~~ILivdd~~~~~~~l~~~L~-~-~~~v~~~--~~~~~a~~~l~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~i 79 (151)
T 3kcn_A 4 NERILLVDDDYSLLNTLKRNLS-F-DFEVTTC--ESGPEALACIKKSDPFSVIMVDMRMPGMEGTEVIQKARLISPNSVY 79 (151)
T ss_dssp CCEEEEECSCHHHHHHHHHHHT-T-TSEEEEE--SSHHHHHHHHHHSCCCSEEEEESCCSSSCHHHHHHHHHHHCSSCEE
T ss_pred CCeEEEEeCCHHHHHHHHHHhc-c-CceEEEe--CCHHHHHHHHHcCCCCCEEEEeCCCCCCcHHHHHHHHHhcCCCcEE
Confidence 3567777765322222222222 1 2233322 23433434443 2 488887544 34567777766543 5666
Q ss_pred EE-eCccc---cccccccccccccCCCCC-cceeEeCCCCHHHHHHHHHHHHHH
Q 008154 484 VV-HATGG---LRDTVENFNPFAREGSGE-GTGWSFLPLSEESMLTALRFAIRT 532 (576)
Q Consensus 484 Ia-t~~gg---~~e~i~~~~~~~~~~~~~-~~G~~~~~~d~~~la~~i~~~l~~ 532 (576)
|. |.... ..+.+.. | ..+++..|-+.+++.++|..++..
T Consensus 80 i~~s~~~~~~~~~~~~~~----------g~~~~~l~KP~~~~~L~~~i~~~l~~ 123 (151)
T 3kcn_A 80 LMLTGNQDLTTAMEAVNE----------GQVFRFLNKPCQMSDIKAAINAGIKQ 123 (151)
T ss_dssp EEEECGGGHHHHHHHHHH----------TCCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHc----------CCeeEEEcCCCCHHHHHHHHHHHHHH
Confidence 65 33222 2233333 5 678999999999999999998863
No 192
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=22.00 E-value=2.8e+02 Score=21.54 Aligned_cols=108 Identities=8% Similarity=0.019 Sum_probs=62.5
Q ss_pred CcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHh--c-CCEEEeCCC-CCCCcHHHHHHHHc----CCc
Q 008154 411 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--G-CDILLMPSR-FEPCGLNQLYAMRY----GTI 482 (576)
Q Consensus 411 ~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~--~-~Dv~v~ps~-~E~~g~s~lEAma~----G~p 482 (576)
..+++|+.+.+ ......+.+-+....++.... +...+...+. . .|+++.-.. .+.-|...++.+.. .+|
T Consensus 7 ~~~ilivdd~~-~~~~~l~~~L~~~g~~v~~~~--~~~~a~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~ 83 (136)
T 3hdv_A 7 RPLVLVVDDNA-VNREALILYLKSRGIDAVGAD--GAEEARLYLHYQKRIGLMITDLRMQPESGLDLIRTIRASERAALS 83 (136)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHHHTTCCEEEES--SHHHHHHHHHHCTTEEEEEECSCCSSSCHHHHHHHHHTSTTTTCE
T ss_pred CCeEEEECCCH-HHHHHHHHHHHHcCceEEEeC--CHHHHHHHHHhCCCCcEEEEeccCCCCCHHHHHHHHHhcCCCCCC
Confidence 45677777763 333333333233334554433 3333323332 2 577776544 35678888887754 356
Q ss_pred eEEe-Cccc---cccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHH
Q 008154 483 PVVH-ATGG---LRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIR 531 (576)
Q Consensus 483 vIat-~~gg---~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~ 531 (576)
+|.. .... ..+.+.. |..+++..|-+.+++.++|.+...
T Consensus 84 ii~~s~~~~~~~~~~~~~~----------g~~~~l~KP~~~~~l~~~i~~~~~ 126 (136)
T 3hdv_A 84 IIVVSGDTDVEEAVDVMHL----------GVVDFLLKPVDLGKLLELVNKELK 126 (136)
T ss_dssp EEEEESSCCHHHHHHHHHT----------TCSEEEESSCCHHHHHHHHHHHHC
T ss_pred EEEEeCCCChHHHHHHHhC----------CcceEEeCCCCHHHHHHHHHHHhc
Confidence 7663 3322 2233333 788999999999999999988764
No 193
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=21.96 E-value=1.5e+02 Score=27.99 Aligned_cols=44 Identities=20% Similarity=0.433 Sum_probs=32.0
Q ss_pred CCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEecCCC
Q 008154 64 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFN 111 (576)
Q Consensus 64 ~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~~~~ 111 (576)
.+.||..|+.. -| .-|-.+.+..||.+|++.|.+|.+|-.+...
T Consensus 90 ~~~kvI~vts~-kg---G~GKTtva~nLA~~lA~~G~rVLLID~D~~~ 133 (286)
T 3la6_A 90 AQNNVLMMTGV-SP---SIGMTFVCANLAAVISQTNKRVLLIDCDMRK 133 (286)
T ss_dssp TTCCEEEEEES-SS---SSSHHHHHHHHHHHHHTTTCCEEEEECCTTT
T ss_pred CCCeEEEEECC-CC---CCcHHHHHHHHHHHHHhCCCCEEEEeccCCC
Confidence 34555555542 22 3577888999999999999999999876543
No 194
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=21.82 E-value=70 Score=30.37 Aligned_cols=38 Identities=24% Similarity=0.418 Sum_probs=24.9
Q ss_pred hhccCCCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEe
Q 008154 59 KAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 59 ~~~~~~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~ 107 (576)
+.|..+.+||+++. .|.+| ..+|..|++.||+|+++..
T Consensus 9 ~~~~~~~~~I~VIG--------~G~mG---~~iA~~la~~G~~V~~~d~ 46 (302)
T 1f0y_A 9 SAKKIIVKHVTVIG--------GGLMG---AGIAQVAAATGHTVVLVDQ 46 (302)
T ss_dssp ---CCCCCEEEEEC--------CSHHH---HHHHHHHHHTTCEEEEECS
T ss_pred ccccccCCEEEEEC--------CCHHH---HHHHHHHHhCCCeEEEEEC
Confidence 45555556898883 24444 4577888889999988753
No 195
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=21.76 E-value=65 Score=30.41 Aligned_cols=24 Identities=33% Similarity=0.398 Sum_probs=18.6
Q ss_pred cCcHHHHHhhHHHHHHhCCCcEEEEEe
Q 008154 81 TGGLGDVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 81 ~GG~~~~~~~la~~l~~~G~~V~vi~~ 107 (576)
+|++| ..+++.|.+.|++|+++..
T Consensus 9 tG~iG---~~l~~~L~~~g~~V~~~~r 32 (312)
T 3ko8_A 9 AGFIG---SHLVDKLVELGYEVVVVDN 32 (312)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEECC
T ss_pred CChHH---HHHHHHHHhCCCEEEEEeC
Confidence 46666 5578889999999998864
No 196
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=21.54 E-value=66 Score=30.81 Aligned_cols=34 Identities=24% Similarity=0.451 Sum_probs=25.1
Q ss_pred CCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEe
Q 008154 64 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 64 ~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~ 107 (576)
+.|+|+.+.. +|++|. .+++.|.+.|++|+++..
T Consensus 19 ~~~~vlVTGa-------sG~iG~---~l~~~L~~~g~~V~~~~r 52 (330)
T 2pzm_A 19 SHMRILITGG-------AGCLGS---NLIEHWLPQGHEILVIDN 52 (330)
T ss_dssp TCCEEEEETT-------TSHHHH---HHHHHHGGGTCEEEEEEC
T ss_pred CCCEEEEECC-------CCHHHH---HHHHHHHHCCCEEEEEEC
Confidence 4577776632 577774 567888899999998875
No 197
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=21.32 E-value=93 Score=26.66 Aligned_cols=34 Identities=12% Similarity=0.051 Sum_probs=25.4
Q ss_pred HHHhcCCEEEeCCCCCCCcHHHHH---HHHcCCceEEe
Q 008154 452 RITAGCDILLMPSRFEPCGLNQLY---AMRYGTIPVVH 486 (576)
Q Consensus 452 ~ll~~~Dv~v~ps~~E~~g~s~lE---Ama~G~pvIat 486 (576)
..+..||++|.--- +.-.-+.+| |.+.|+||+.-
T Consensus 73 ~~i~~aD~vva~~~-~~d~Gt~~EiGyA~algKPVi~l 109 (165)
T 2khz_A 73 NWLQQADVVVAEVT-QPSLGVGYELGRAVALGKPILCL 109 (165)
T ss_dssp HHHHHCSEEEEECS-SCCHHHHHHHHHHHHTCSSEEEE
T ss_pred HHHHhCCEEEEECC-CCCCCHHHHHHHHHHCCCEEEEE
Confidence 57899999987433 555555555 78999999994
No 198
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=21.30 E-value=1e+02 Score=26.76 Aligned_cols=38 Identities=11% Similarity=0.147 Sum_probs=30.7
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHh-CCCcEEEEEec
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAA-RGHRVMVVSPR 108 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~-~G~~V~vi~~~ 108 (576)
|||+.+... + .|-...++..+++.+.+ .|++|.++-..
T Consensus 2 mkilii~~S--~---~g~t~~la~~i~~~l~~~~g~~v~~~~l~ 40 (198)
T 3b6i_A 2 AKVLVLYYS--M---YGHIETMARAVAEGASKVDGAEVVVKRVP 40 (198)
T ss_dssp CEEEEEECC--S---SSHHHHHHHHHHHHHHTSTTCEEEEEECC
T ss_pred CeEEEEEeC--C---CcHHHHHHHHHHHHHhhcCCCEEEEEEcc
Confidence 688888654 4 47788889999999998 89999998653
No 199
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}
Probab=21.27 E-value=6.5e+02 Score=25.42 Aligned_cols=76 Identities=5% Similarity=0.009 Sum_probs=44.4
Q ss_pred HHHhcCCEEEeCCCCCCCcHH--HHHHHH---------cCCceEEeC----ccccccccccccccccCCCCCcceeEeCC
Q 008154 452 RITAGCDILLMPSRFEPCGLN--QLYAMR---------YGTIPVVHA----TGGLRDTVENFNPFAREGSGEGTGWSFLP 516 (576)
Q Consensus 452 ~ll~~~Dv~v~ps~~E~~g~s--~lEAma---------~G~pvIat~----~gg~~e~i~~~~~~~~~~~~~~~G~~~~~ 516 (576)
.++..+|++|.-+ -++|+- ++|++. .++|||..+ .|.|..++.-.+.... . .....+.+-.
T Consensus 241 ~mv~~SDAfIaLP--GG~GTLeELfEaLT~~QLg~~k~~~kPVVLlg~~n~~gywd~Ll~~l~~~l~-~-~~~~~~iiv~ 316 (460)
T 3bq9_A 241 AFVRCAHGIVIFP--GGAGTAEELLYLLGILMHPDNQRQSLPVILTGPASSRDYFEALDEFIGATIG-D-EARQLYKIII 316 (460)
T ss_dssp HHHHHCSEEEECS--CSHHHHHHHHHHHHHHTSGGGTTCCCCEEEEECGGGHHHHHHHHHHHHHHTC-T-TGGGGCEEEE
T ss_pred HHHHhCCEEEEcC--CCcchHHHHHHHHHHHhhccccCCCCCEEEEecCCccchhhHHHHHHHHHhc-c-hhhcCcEEEe
Confidence 4668899888654 367765 477777 489999986 4555543321110000 0 1122332223
Q ss_pred CCHHHHHHHHHHHHH
Q 008154 517 LSEESMLTALRFAIR 531 (576)
Q Consensus 517 ~d~~~la~~i~~~l~ 531 (576)
+|++++.+.+.+.+.
T Consensus 317 ddpeEal~~l~~~~~ 331 (460)
T 3bq9_A 317 DDPAAVAQHMHAGMA 331 (460)
T ss_dssp SCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 489998888887765
No 200
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=21.26 E-value=3.4e+02 Score=27.25 Aligned_cols=79 Identities=19% Similarity=0.054 Sum_probs=33.9
Q ss_pred HHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHHhhhCHHHHHHHHHHHHhh--hCC
Q 008154 476 AMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRTYREHKSSWEGLMRRGMEK--DYT 553 (576)
Q Consensus 476 Ama~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~a~~~--~fs 553 (576)
....|+|++....|.--+-+..|.+.. -..-++..+|...+.+.+.+.+. .+..++++++-... .|+
T Consensus 261 ~~~~g~Pi~fig~Ge~v~dL~~f~p~~------~~~~llg~gd~~~l~e~~~~~~~-----~~~~~~~~~k~~~g~~~f~ 329 (433)
T 3kl4_A 261 VVATGATIKFIGTGEKIDELETFNAKR------FVSRILGMGDIESILEKVKGLEE-----YDKIQKKMEDVMEGKGKLT 329 (433)
T ss_dssp HHHHTCEEEEEECCSSSSCEEECCHHH------HHHHHHCSSHHHHHHHHHHHC------------------------CC
T ss_pred HHHHCCCEEEEECCCChHhCccCCHHH------HHHHhcCCchHHHHHHHHHHhhh-----HHHHHHHHHHHHcCCCCCC
Confidence 345799997655542223333321111 11222344555555555555543 23333444444444 799
Q ss_pred HHHHHHHHHHHH
Q 008154 554 WENAAIQYEQVF 565 (576)
Q Consensus 554 ~~~~~~~y~~~y 565 (576)
.+.+.+++.++-
T Consensus 330 ~~d~~~q~~~~~ 341 (433)
T 3kl4_A 330 LRDVYAQIIALR 341 (433)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999998887754
No 201
>3ujp_A Mn transporter subunit; manganese binding protein, metal binding protein; 2.70A {Synechocystis SP} PDB: 1xvl_A 3v63_A
Probab=21.23 E-value=1.5e+02 Score=28.31 Aligned_cols=88 Identities=13% Similarity=0.097 Sum_probs=49.5
Q ss_pred HHHhcCCEEEeCCC-CCCCcHHHHHHHHcCCceEEeCccccccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHH
Q 008154 452 RITAGCDILLMPSR-FEPCGLNQLYAMRYGTIPVVHATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAI 530 (576)
Q Consensus 452 ~ll~~~Dv~v~ps~-~E~~g~s~lEAma~G~pvIat~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l 530 (576)
.-++.||++|.... +|+|--.++++.. +.++|....| +.. +.. ..........-.-| .+|.+...+++.|.+.|
T Consensus 76 ~~l~~ADlvv~nG~~lE~wl~k~~~~~~-~~~~v~~s~g-i~~-~~~-~~~~~~~~~DPHvW-ldp~n~~~~a~~I~~~L 150 (307)
T 3ujp_A 76 VKAQDADLILYNGMNLERWFEQFLGNVK-DVPSVVLTEG-IEP-IPI-ADGPYTDKPNPHAW-MSPRNALVYVENIRQAF 150 (307)
T ss_dssp HHHHHCSEEEECCTTSSTTHHHHHHTSC-SCCEEETTTT-CCC-CBC-CSSSSTTSBCCCCT-TCHHHHHHHHHHHHHHH
T ss_pred HHHhcCCEEEEcCCChHHHHHHHHHhCC-CCCEEEeeCC-ccc-ccc-ccccCCCCCCCCcC-CCHHHHHHHHHHHHHHH
Confidence 57899999999876 7988777777652 4566654332 211 110 00000000011233 36667788888888888
Q ss_pred HHhhhCHHHHHHHHHH
Q 008154 531 RTYREHKSSWEGLMRR 546 (576)
Q Consensus 531 ~~~~~~~~~~~~~~~~ 546 (576)
... ||+......++
T Consensus 151 ~~~--DP~~a~~Y~~N 164 (307)
T 3ujp_A 151 VEL--DPDNAKYYNAN 164 (307)
T ss_dssp HHH--CGGGHHHHHHH
T ss_pred HHh--CchhHHHHHHH
Confidence 754 66544444444
No 202
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=21.07 E-value=55 Score=27.31 Aligned_cols=24 Identities=25% Similarity=0.248 Sum_probs=20.4
Q ss_pred HHHHhhHHHHHHhCCCcEEEEEec
Q 008154 85 GDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 85 ~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
|..-..+++.|.+.|++|+++...
T Consensus 12 G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 12 SILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CHHHHHHHHHHHHCCCCEEEEECC
Confidence 666688899999999999999754
No 203
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=21.05 E-value=68 Score=30.52 Aligned_cols=32 Identities=13% Similarity=0.179 Sum_probs=23.6
Q ss_pred CCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEE
Q 008154 64 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 106 (576)
Q Consensus 64 ~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~ 106 (576)
.+|||+++. .|-+| ..+++.|++.||+|+++.
T Consensus 6 ~~~~I~iIG--------~G~mG---~~~a~~l~~~G~~V~~~d 37 (303)
T 3g0o_A 6 TDFHVGIVG--------LGSMG---MGAARSCLRAGLSTWGAD 37 (303)
T ss_dssp -CCEEEEEC--------CSHHH---HHHHHHHHHTTCEEEEEC
T ss_pred CCCeEEEEC--------CCHHH---HHHHHHHHHCCCeEEEEE
Confidence 457899883 24444 567888999999999884
No 204
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=21.01 E-value=3e+02 Score=21.54 Aligned_cols=109 Identities=10% Similarity=0.081 Sum_probs=60.6
Q ss_pred CcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHh--cCCEEEeCCCC-CCCcHHHHHHHHc--CCceEE
Q 008154 411 DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSRF-EPCGLNQLYAMRY--GTIPVV 485 (576)
Q Consensus 411 ~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~--~~Dv~v~ps~~-E~~g~s~lEAma~--G~pvIa 485 (576)
..+++|+.+.+.........+. .....+... .+...+...+. ..|+++.-... +.-|+.+++.+.. .+|+|.
T Consensus 4 ~~~Ilivdd~~~~~~~l~~~L~-~~g~~v~~~--~~~~~al~~~~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ 80 (136)
T 2qzj_A 4 QTKILIIDGDKDNCQKLKGFLE-EKGISIDLA--YNCEEAIGKIFSNKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVY 80 (136)
T ss_dssp CCEEEEECSCHHHHHHHHHHHH-TTTCEEEEE--SSHHHHHHHHHHCCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHH-HCCCEEEEE--CCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEE
Confidence 3566777765322223333332 222233222 23333333443 46888764432 3457777777653 567766
Q ss_pred e-Ccccc---ccccccccccccCCCCCcceeEeCCCCHHHHHHHHHHHHHH
Q 008154 486 H-ATGGL---RDTVENFNPFAREGSGEGTGWSFLPLSEESMLTALRFAIRT 532 (576)
Q Consensus 486 t-~~gg~---~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~i~~~l~~ 532 (576)
. ..... .+.+.. |..+++..|-+.+++.+.+..++..
T Consensus 81 ls~~~~~~~~~~~~~~----------ga~~~l~KP~~~~~L~~~l~~~~~~ 121 (136)
T 2qzj_A 81 MTYINEDQSILNALNS----------GGDDYLIKPLNLEILYAKVKAILRR 121 (136)
T ss_dssp EESCCCHHHHHHHHHT----------TCCEEEESSCCHHHHHHHHHHHHHH
T ss_pred EEcCCCHHHHHHHHHc----------CCcEEEECCCCHHHHHHHHHHHHHH
Confidence 3 33322 233333 7889999999999999999887753
No 205
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=20.79 E-value=63 Score=30.70 Aligned_cols=32 Identities=31% Similarity=0.505 Sum_probs=26.1
Q ss_pred ceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEe
Q 008154 66 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 66 mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~ 107 (576)
++|+++ ||.|..-..+++.|++.|++|.++..
T Consensus 22 ~~I~iI----------Gg~G~mG~~la~~l~~~G~~V~~~~~ 53 (298)
T 2pv7_A 22 HKIVIV----------GGYGKLGGLFARYLRASGYPISILDR 53 (298)
T ss_dssp CCEEEE----------TTTSHHHHHHHHHHHTTTCCEEEECT
T ss_pred CEEEEE----------cCCCHHHHHHHHHHHhCCCeEEEEEC
Confidence 477776 66777778899999999999998853
No 206
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=20.71 E-value=1.7e+02 Score=27.65 Aligned_cols=93 Identities=14% Similarity=0.093 Sum_probs=52.4
Q ss_pred CCCEEEEecccccccCHHHHHHHHHhhhcCCcEEEEEeCCChhhHHHHHHHHHHhcCceEEEccCChhHHHHHHhcCCEE
Q 008154 381 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDIL 460 (576)
Q Consensus 381 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~L~~~~~~lii~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Dv~ 460 (576)
..+.|+++|-=. =|...+++++.+. ++++++-+-+.+ ++..+.+.+.+.... ++. ...++..+|++
T Consensus 5 ~~~~igiIG~G~--~g~~~~~~~l~~~--~~~~l~av~d~~---~~~~~~~a~~~~~~~-----~~~--~~~ll~~~D~V 70 (308)
T 3uuw_A 5 KNIKMGMIGLGS--IAQKAYLPILTKS--ERFEFVGAFTPN---KVKREKICSDYRIMP-----FDS--IESLAKKCDCI 70 (308)
T ss_dssp CCCEEEEECCSH--HHHHHTHHHHTSC--SSSEEEEEECSC---HHHHHHHHHHHTCCB-----CSC--HHHHHTTCSEE
T ss_pred ccCcEEEEecCH--HHHHHHHHHHHhC--CCeEEEEEECCC---HHHHHHHHHHcCCCC-----cCC--HHHHHhcCCEE
Confidence 346677776411 0111234444332 567777666654 233344444443322 322 22466799999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEeC
Q 008154 461 LMPSRFEPCGLNQLYAMRYGTIPVVHA 487 (576)
Q Consensus 461 v~ps~~E~~g~s~lEAma~G~pvIat~ 487 (576)
+..+....-.-...+|+..|++|++..
T Consensus 71 ~i~tp~~~h~~~~~~al~~gk~vl~EK 97 (308)
T 3uuw_A 71 FLHSSTETHYEIIKILLNLGVHVYVDK 97 (308)
T ss_dssp EECCCGGGHHHHHHHHHHTTCEEEECS
T ss_pred EEeCCcHhHHHHHHHHHHCCCcEEEcC
Confidence 988776555555678999999988653
No 207
>1p2f_A Response regulator; DRRB, OMPR/PHOB, transcription; HET: MSE; 1.80A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nns_A*
Probab=20.69 E-value=3.2e+02 Score=23.70 Aligned_cols=71 Identities=8% Similarity=0.137 Sum_probs=47.6
Q ss_pred HHHhcCCEEEeCCCC-CCCcHHHHHHHH---cCCceEEe-Cccc---cccccccccccccCCCCCcceeEeCCCCHHHHH
Q 008154 452 RITAGCDILLMPSRF-EPCGLNQLYAMR---YGTIPVVH-ATGG---LRDTVENFNPFAREGSGEGTGWSFLPLSEESML 523 (576)
Q Consensus 452 ~ll~~~Dv~v~ps~~-E~~g~s~lEAma---~G~pvIat-~~gg---~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la 523 (576)
..+...|+++.--.. +.-|..+++.+. ..+|+|.. .... ..+.+.. |..|++..|.+.+++.
T Consensus 39 ~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~~~~~~~~~~~~~----------ga~~~l~Kp~~~~~L~ 108 (220)
T 1p2f_A 39 NDEEAFHVVVLDVMLPDYSGYEICRMIKETRPETWVILLTLLSDDESVLKGFEA----------GADDYVTKPFNPEILL 108 (220)
T ss_dssp HCCSCCSEEEEESBCSSSBHHHHHHHHHHHCTTSEEEEEESCCSHHHHHHHHHH----------TCSEEEESSCCHHHHH
T ss_pred HhcCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEEEEcCCCHHHHHHHHHc----------CCCEEEECCCCHHHHH
Confidence 333678988865443 456777776664 46777763 3322 2233333 7889999999999999
Q ss_pred HHHHHHHHH
Q 008154 524 TALRFAIRT 532 (576)
Q Consensus 524 ~~i~~~l~~ 532 (576)
++|..++..
T Consensus 109 ~~i~~~~~~ 117 (220)
T 1p2f_A 109 ARVKRFLER 117 (220)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHcc
Confidence 999998764
No 208
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=20.67 E-value=1.2e+02 Score=26.68 Aligned_cols=39 Identities=18% Similarity=0.092 Sum_probs=31.7
Q ss_pred CCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEe
Q 008154 64 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 64 ~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~ 107 (576)
.+|||+.+... | .|-...++..+++.+.+.|++|.++-.
T Consensus 5 ~mmkilii~~S--~---~g~T~~la~~i~~~l~~~g~~v~~~~l 43 (211)
T 1ydg_A 5 APVKLAIVFYS--S---TGTGYAMAQEAAEAGRAAGAEVRLLKV 43 (211)
T ss_dssp CCCEEEEEECC--S---SSHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCeEEEEEEC--C---CChHHHHHHHHHHHHhcCCCEEEEEec
Confidence 45899998753 4 477888899999999999999998864
No 209
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=20.63 E-value=1.5e+02 Score=26.88 Aligned_cols=38 Identities=8% Similarity=0.109 Sum_probs=30.4
Q ss_pred CceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEE
Q 008154 65 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 106 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~ 106 (576)
+||.+||+..- + .-|=.+++..|+++|+++|.+|..+=
T Consensus 3 ~mk~i~Itgt~-t---~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 3 AMKKFFIIGTD-T---EVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp TCEEEEEEESS-S---SSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCcEEEEEeCC-C---CCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 47888887642 2 36788889999999999999999874
No 210
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=20.52 E-value=1.1e+02 Score=26.87 Aligned_cols=40 Identities=15% Similarity=0.210 Sum_probs=29.0
Q ss_pred CceEEEEeeccCCccccCcHHHHHhhHHHH-HHhCCCcEEEEEe
Q 008154 65 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVA-LAARGHRVMVVSP 107 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~~~GG~~~~~~~la~~-l~~~G~~V~vi~~ 107 (576)
+|||++++.. |. ..|-...++..+++. +.+.|++|.++-.
T Consensus 2 Mmkilii~gS--~r-~~g~t~~la~~i~~~~l~~~g~~v~~~dl 42 (197)
T 2vzf_A 2 TYSIVAISGS--PS-RNSTTAKLAEYALAHVLARSDSQGRHIHV 42 (197)
T ss_dssp CEEEEEEECC--SS-TTCHHHHHHHHHHHHHHHHSSEEEEEEEG
T ss_pred CceEEEEECC--CC-CCChHHHHHHHHHHHHHHHCCCeEEEEEc
Confidence 3789999864 31 235566677777788 8889999998864
No 211
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=20.48 E-value=3.1e+02 Score=21.48 Aligned_cols=66 Identities=15% Similarity=0.111 Sum_probs=42.4
Q ss_pred cCCEEEeCCCC-CCCcHHHHHHHH--------cCCceEEe-CccccccccccccccccCCCCCcceeEeCCCCHHHHHHH
Q 008154 456 GCDILLMPSRF-EPCGLNQLYAMR--------YGTIPVVH-ATGGLRDTVENFNPFAREGSGEGTGWSFLPLSEESMLTA 525 (576)
Q Consensus 456 ~~Dv~v~ps~~-E~~g~s~lEAma--------~G~pvIat-~~gg~~e~i~~~~~~~~~~~~~~~G~~~~~~d~~~la~~ 525 (576)
..|+++.--.. +.-|..+++.+. ..+|+|.. ........... |..+++..|-+.+++.++
T Consensus 54 ~~dlvllD~~lp~~~g~~~~~~l~~~~~~~~~~~~~ii~~s~~~~~~~~~~~----------g~~~~l~KP~~~~~L~~~ 123 (140)
T 3c97_A 54 QFDVIIMDIQMPVMDGLEAVSEIRNYERTHNTKRASIIAITADTIDDDRPGA----------ELDEYVSKPLNPNQLRDV 123 (140)
T ss_dssp CCSEEEECTTCCSSCHHHHHHHHHHHHHHHTCCCCCCEEEESSCCSCCCCCS----------SCSEEEESSCCHHHHHHH
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHhhhhhcCCCceEEEEEeCccchhHHHhC----------ChhheEeCCCCHHHHHHH
Confidence 47888875543 345777777665 24566653 32222222222 668999999999999888
Q ss_pred HHHHHH
Q 008154 526 LRFAIR 531 (576)
Q Consensus 526 i~~~l~ 531 (576)
|..++.
T Consensus 124 i~~~~~ 129 (140)
T 3c97_A 124 VLTCHS 129 (140)
T ss_dssp HHHHHC
T ss_pred HHHHhC
Confidence 887753
No 212
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=20.22 E-value=1e+02 Score=26.91 Aligned_cols=37 Identities=14% Similarity=0.160 Sum_probs=30.2
Q ss_pred CceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEe
Q 008154 65 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 107 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~ 107 (576)
+|||+.+... .|-...++..+++.+.+.|++|.++-.
T Consensus 4 mmkilii~~S------~g~T~~la~~i~~~l~~~g~~v~~~~l 40 (199)
T 2zki_A 4 KPNILVLFYG------YGSIVELAKEIGKGAEEAGAEVKIRRV 40 (199)
T ss_dssp CCEEEEEECC------SSHHHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred CcEEEEEEeC------ccHHHHHHHHHHHHHHhCCCEEEEEeh
Confidence 4789988754 367888888899999989999998864
No 213
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=20.19 E-value=76 Score=30.61 Aligned_cols=35 Identities=29% Similarity=0.377 Sum_probs=29.7
Q ss_pred CCceEEEEeeccCCccccCcHHHHHhhHHHHHHhCCCcEEEEEec
Q 008154 64 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 108 (576)
Q Consensus 64 ~~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~~G~~V~vi~~~ 108 (576)
++++|+++. ...+++..++.+++..|.+|.+++|.
T Consensus 154 ~gl~va~vG----------D~~rva~Sl~~~~~~~g~~v~~~~P~ 188 (315)
T 1pvv_A 154 KGVKVVYVG----------DGNNVAHSLMIAGTKLGADVVVATPE 188 (315)
T ss_dssp TTCEEEEES----------CCCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred CCcEEEEEC----------CCcchHHHHHHHHHHCCCEEEEECCc
Confidence 468899973 22789999999999999999999985
No 214
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=20.06 E-value=1.1e+02 Score=26.53 Aligned_cols=38 Identities=11% Similarity=0.125 Sum_probs=30.7
Q ss_pred CceEEEEeeccCCccccCcHHHHHhhHHHHHHh-CCCcEEEEEe
Q 008154 65 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAA-RGHRVMVVSP 107 (576)
Q Consensus 65 ~mkI~~~s~e~~P~~~~GG~~~~~~~la~~l~~-~G~~V~vi~~ 107 (576)
+|||+.+... + .|-...++..+++.+.+ .|++|.++-.
T Consensus 4 M~kiliiy~S--~---~GnT~~~a~~i~~~l~~~~g~~v~~~~l 42 (188)
T 2ark_A 4 MGKVLVIYDT--R---TGNTKKMAELVAEGARSLEGTEVRLKHV 42 (188)
T ss_dssp CEEEEEEECC--S---SSHHHHHHHHHHHHHHTSTTEEEEEEET
T ss_pred CCEEEEEEEC--C---CcHHHHHHHHHHHHHhhcCCCeEEEEEh
Confidence 4688888653 4 57888899999999998 8999988864
No 215
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=20.03 E-value=1.7e+02 Score=26.67 Aligned_cols=29 Identities=34% Similarity=0.434 Sum_probs=24.5
Q ss_pred CcHHHHHhhHHHHHHhCCCcEEEEEecCC
Q 008154 82 GGLGDVCGSLPVALAARGHRVMVVSPRYF 110 (576)
Q Consensus 82 GG~~~~~~~la~~l~~~G~~V~vi~~~~~ 110 (576)
-|-.+.+..+|.+|++.|++|.+|-.+..
T Consensus 14 vGKTt~a~~LA~~la~~g~~VlliD~D~~ 42 (263)
T 1hyq_A 14 TGKTTITANLGVALAQLGHDVTIVDADIT 42 (263)
T ss_dssp SCHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred CCHHHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 46678899999999999999999976643
Done!