BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008155
(576 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356548029|ref|XP_003542406.1| PREDICTED: guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase-like [Glycine max]
Length = 579
Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/578 (71%), Positives = 481/578 (83%), Gaps = 27/578 (4%)
Query: 8 PNVKIPKLNTFTNM--RTRRIP------APRLNSHSIRAESSSSSFASSPAPLPSTAGEK 59
P V +P ++ + + R RR P APR + + + G K
Sbjct: 20 PTVSLPPTHSLSVVVFRRRRSPCGGRWWAPR----------------ACAVEVSESEGGK 63
Query: 60 MVVKLVGAFNELTERMNVLSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTKALSVALL 119
MV++LVGAFNELTERMNVLS+SSSRLLFK LKLSIP+LQS PL+PD RSPL+KALSVALL
Sbjct: 64 MVMELVGAFNELTERMNVLSTSSSRLLFKCLKLSIPILQSSPLAPDGRSPLSKALSVALL 123
Query: 120 LADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLD 179
LADLQMDAEVISAG+ R V+E+G +SI ++R+++G+ TAHLLHESLRV NN ++ V+D
Sbjct: 124 LADLQMDAEVISAGIFRAVLEAGELSIHEIRNQMGLATAHLLHESLRV-NNFPSRIDVVD 182
Query: 180 DETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAV 239
D+ AAALRKFCLTYYDIRALILDLA++LDMMRHLDYLPRYQQ +IS++VMKIHAPLAHAV
Sbjct: 183 DDNAAALRKFCLTYYDIRALILDLALKLDMMRHLDYLPRYQQQIISMQVMKIHAPLAHAV 242
Query: 240 ATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADL 299
T YLS ELEDLSF+YLFP+SYL+VD WLRSHETG LIDIYKE+LL+ LK D+ LA+L
Sbjct: 243 GTTYLSLELEDLSFQYLFPYSYLYVDAWLRSHETGGVSLIDIYKEELLRNLKADSLLAEL 302
Query: 300 VEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTT 359
V+DVS++GR+KSRYSTMKKLLKDGR PE+VNDVLG+RVI+ P + N E GERACY T
Sbjct: 303 VDDVSIKGRFKSRYSTMKKLLKDGRKPEDVNDVLGMRVILNPKAG-ENALEAGERACYRT 361
Query: 360 REIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAV 419
+IIQS+WKE+P+RTKDYIARPKANGY+SLHMAVDVS+NGKTRPLMEIQIRT EMD LAV
Sbjct: 362 HQIIQSMWKEIPYRTKDYIARPKANGYKSLHMAVDVSENGKTRPLMEIQIRTTEMDRLAV 421
Query: 420 NGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIP-STNHKGFEFDWRDRVFRL 478
GTA+H+ YK GLT+PEEAKRLK IMLAAAELAALRLKD P STNHKG E RDRVFRL
Sbjct: 422 GGTAAHSLYKAGLTDPEEAKRLKTIMLAAAELAALRLKDFPTSTNHKGIEIHQRDRVFRL 481
Query: 479 LDKNGDGRISIEELMEVMEELGAPGEDAREMMQLLDSNSDGSLSSDEFDLFQKQVEFMRN 538
LDKNGDG+ISIEEL EVMEELGAPGEDAREMMQLLDSNSDGSLSSDEF +FQ+QVE +RN
Sbjct: 482 LDKNGDGKISIEELTEVMEELGAPGEDAREMMQLLDSNSDGSLSSDEFHMFQEQVELVRN 541
Query: 539 LEDRDDEYRTMLDEKLQMAGDSGLIQVYSTELGNRLAS 576
LE RDD+Y+ +LDEKL MA +SGLIQVYS E GNRLAS
Sbjct: 542 LEVRDDQYKKLLDEKLHMADESGLIQVYSKEFGNRLAS 579
>gi|225432183|ref|XP_002268377.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Vitis vinifera]
gi|297736813|emb|CBI26014.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 810 bits (2093), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/580 (73%), Positives = 495/580 (85%), Gaps = 17/580 (2%)
Query: 7 IPNVKIPKLNTFTNMRTRRIPA-----------PRLNSHSIRAESSSSSFASSPAPLPST 55
IP + P L++F+ +R +P N+ S +S++++ ++ P
Sbjct: 5 IPTIDFP-LHSFSKIRVSTLPKFPSNLIFLQRHRSWNAFSTLRQSATAAVGAATLEQP-- 61
Query: 56 AGEKMVVKLVGAFNELTERMNVLSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTKALS 115
G KMVV+LVGAFNELTERM V+SSSSS +LFK LKLSIP+LQ+LPL PD RSPL+KALS
Sbjct: 62 -GGKMVVELVGAFNELTERMKVVSSSSSSILFKCLKLSIPLLQALPLCPDGRSPLSKALS 120
Query: 116 VALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKL 175
VAL+LADLQMDAEVISAG+LR+V+E+G V+I +VRDRIG GTAHLLHESLRVK + K+
Sbjct: 121 VALILADLQMDAEVISAGILREVLEAGAVTIYEVRDRIGTGTAHLLHESLRVK-QIPSKV 179
Query: 176 QVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPL 235
+VLDD++ AALRKFCLTYYD+RA+ILDLAIRLDMM+HLDYLPRYQQ M+SLEVMKIH PL
Sbjct: 180 EVLDDDSTAALRKFCLTYYDVRAVILDLAIRLDMMKHLDYLPRYQQQMLSLEVMKIHVPL 239
Query: 236 AHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDAT 295
AHAV TN+LS ELEDLSFR LFP+SYL+VDTWLRSHETGSKPLID+Y+E LLQ LK D
Sbjct: 240 AHAVGTNFLSLELEDLSFRCLFPYSYLYVDTWLRSHETGSKPLIDVYREHLLQSLKADHL 299
Query: 296 LADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERA 355
LA++V+D+SV+GRYKSRYSTMKKLLKDGR PEE+ND+LGLRVI+KP S VNTS++GE+A
Sbjct: 300 LAEMVDDISVKGRYKSRYSTMKKLLKDGRKPEEINDILGLRVILKPRSG-VNTSKLGEKA 358
Query: 356 CYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMD 415
CY TREIIQSLWKEMPHRTKDYIA+PKANGY+SLHMAVDVS+ G+T+PLMEIQIRT EMD
Sbjct: 359 CYRTREIIQSLWKEMPHRTKDYIAKPKANGYKSLHMAVDVSEGGRTKPLMEIQIRTTEMD 418
Query: 416 MLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFEFDWRDRV 475
M+A GTASH+ YKGG+T+PEEAK+LKAIM+AAAELAALRLKD+PSTN KG E + RDR
Sbjct: 419 MMASGGTASHSLYKGGVTDPEEAKQLKAIMMAAAELAALRLKDLPSTNPKGTEINQRDRA 478
Query: 476 FRLLDKNGDGRISIEELMEVMEELGAPGEDAREMMQLLDSNSDGSLSSDEFDLFQKQVEF 535
F LLDKNGDGRISIEELMEVMEELGA GEDAREMMQLLDSNSDGSLSSDEFDLFQKQVE
Sbjct: 479 FCLLDKNGDGRISIEELMEVMEELGAQGEDAREMMQLLDSNSDGSLSSDEFDLFQKQVEI 538
Query: 536 MRNLEDRDDEYRTMLDEKLQMAGDSGLIQVYSTELGNRLA 575
MRNLEDRDD+YRTML+EKL MA +G IQVY E+ +RLA
Sbjct: 539 MRNLEDRDDQYRTMLNEKLHMAESNGQIQVYRKEIDDRLA 578
>gi|255556586|ref|XP_002519327.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase, putative
[Ricinus communis]
gi|223541642|gb|EEF43191.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase, putative
[Ricinus communis]
Length = 518
Score = 801 bits (2070), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/521 (79%), Positives = 468/521 (89%), Gaps = 4/521 (0%)
Query: 56 AGEKMVVKLVGAFNELTERMNVLSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTKALS 115
G KMVV+LVGAFNELTERMNVLS+SSSRLLFK+LKLSIP+L LPL PD RSPL+KALS
Sbjct: 2 GGGKMVVELVGAFNELTERMNVLSTSSSRLLFKSLKLSIPILHHLPLLPDGRSPLSKALS 61
Query: 116 VALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKL 175
VALLLA LQMDAEVISA +L QV E+G +SI++VR+RI TAHLL+ESLRVK+ + ++
Sbjct: 62 VALLLAHLQMDAEVISASILIQVFEAGAISIREVRERISTATAHLLNESLRVKS-IPSRV 120
Query: 176 QVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPL 235
+VLDDE AAALRKFCLTYYDIRA+ILDLA++LDMMRHLDYLPRYQQ M+SL+VMKIHAPL
Sbjct: 121 EVLDDEGAAALRKFCLTYYDIRAVILDLALKLDMMRHLDYLPRYQQQMLSLQVMKIHAPL 180
Query: 236 AHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDAT 295
AHAV NYLS ELEDLSFRYLFP+SYL+VDTWLRSH+TG+K LIDIY E+L Q L+ D+
Sbjct: 181 AHAVGINYLSLELEDLSFRYLFPYSYLYVDTWLRSHQTGTKSLIDIYVEELHQSLQADSI 240
Query: 296 LADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERA 355
LAD+V+++SV+GRYKSR+STMKKLLKDGR PEEVNDVLGLRVI+KP S V+ SEVGE+A
Sbjct: 241 LADMVDNISVKGRYKSRFSTMKKLLKDGRKPEEVNDVLGLRVILKPKSG-VDMSEVGEKA 299
Query: 356 CYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMD 415
CY T EII+SLWKEMPHRTKDYIA+PKANGYRSLHMAVD+SDNGK RP MEIQIRT EMD
Sbjct: 300 CYRTCEIIRSLWKEMPHRTKDYIAQPKANGYRSLHMAVDISDNGKNRPPMEIQIRTMEMD 359
Query: 416 MLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFEFDWRDRV 475
MLAV+GTASH+ YKGGLT+PEEAKRLKAIM+AAAELAALRL+D+PS KG E D DRV
Sbjct: 360 MLAVDGTASHSLYKGGLTDPEEAKRLKAIMMAAAELAALRLRDLPSA--KGIEIDRNDRV 417
Query: 476 FRLLDKNGDGRISIEELMEVMEELGAPGEDAREMMQLLDSNSDGSLSSDEFDLFQKQVEF 535
F L DKNGDGRISIEELMEVMEELGAPGEDAREMMQLLDSNSDGSLSSDEFD FQKQVEF
Sbjct: 418 FCLFDKNGDGRISIEELMEVMEELGAPGEDAREMMQLLDSNSDGSLSSDEFDTFQKQVEF 477
Query: 536 MRNLEDRDDEYRTMLDEKLQMAGDSGLIQVYSTELGNRLAS 576
MR LEDRDDEY++ML+EKL+MA +SGLIQVYS ELGNRLA
Sbjct: 478 MRALEDRDDEYKSMLNEKLKMAENSGLIQVYSKELGNRLAG 518
>gi|357479179|ref|XP_003609875.1| GTP pyrophosphokinase [Medicago truncatula]
gi|355510930|gb|AES92072.1| GTP pyrophosphokinase [Medicago truncatula]
Length = 580
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/571 (70%), Positives = 473/571 (82%), Gaps = 2/571 (0%)
Query: 6 PIPNVKIPKLNTFTNMRTRRIPAPRLNSHSIRAESSSSSFASSPAPLPSTAGEKMVVKLV 65
P + + K TF+ RR+ + + R+ + S + G KMV++LV
Sbjct: 12 PTRHHYLSKPTTFSTTTHRRLLSLFFPTRPTRSTTLRWSSTPRACSVEVPGGGKMVIELV 71
Query: 66 GAFNELTERMNVLSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQM 125
GAFN+LTERM VLS+SSS LLFK+LKLSIP+LQ+ PL+PD RSPL+KALS+A+LLADLQM
Sbjct: 72 GAFNDLTERMKVLSTSSSGLLFKSLKLSIPVLQTSPLTPDGRSPLSKALSIAMLLADLQM 131
Query: 126 DAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAA 185
DAEVISAG+LR+V+E G +++ ++R +IG TAHLLHESLRVKN + ++ +LDDE AAA
Sbjct: 132 DAEVISAGILREVLEVGELNLHEIRSQIGSATAHLLHESLRVKNFAS-RVDILDDENAAA 190
Query: 186 LRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLS 245
LRKFCLTYYDIRALILDLA++LDMMRHL +LPRYQQ +ISL+VMKI+APLAHAV TNY+S
Sbjct: 191 LRKFCLTYYDIRALILDLALKLDMMRHLGHLPRYQQQIISLQVMKIYAPLAHAVGTNYIS 250
Query: 246 FELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSV 305
ELEDLSF+YLFP+SYL+VDTWLRS ETG LID+YK++LL+ LK+D LA+LV+D+SV
Sbjct: 251 LELEDLSFQYLFPYSYLYVDTWLRSQETGGISLIDVYKDELLESLKSDPILAELVDDISV 310
Query: 306 QGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQS 365
+GRYKSRYSTMKKLLKDGR PE+VNDVLGLRV++ P S N E GERACY +IIQS
Sbjct: 311 KGRYKSRYSTMKKLLKDGRRPEDVNDVLGLRVVLNPKSR-ENALEAGERACYRAHQIIQS 369
Query: 366 LWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASH 425
+WKE+P RTKDYI+RPK NGYRSLHMAVDVS+ G+TRPLMEIQIRT EMD LAV G ASH
Sbjct: 370 MWKEIPSRTKDYISRPKGNGYRSLHMAVDVSEIGRTRPLMEIQIRTTEMDRLAVGGMASH 429
Query: 426 AFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFEFDWRDRVFRLLDKNGDG 485
+ YK GLTNPEEAKRLK IMLAAAELAALRLKD PS NHKG EFD RDRVFRLLDKNGDG
Sbjct: 430 SLYKAGLTNPEEAKRLKTIMLAAAELAALRLKDFPSANHKGIEFDQRDRVFRLLDKNGDG 489
Query: 486 RISIEELMEVMEELGAPGEDAREMMQLLDSNSDGSLSSDEFDLFQKQVEFMRNLEDRDDE 545
+ISIEEL EV+EELGAPGEDA +MM LLDSNSDGSLSSDEF +FQKQVE +RNLEDRDDE
Sbjct: 490 KISIEELTEVIEELGAPGEDAHDMMLLLDSNSDGSLSSDEFQMFQKQVEMVRNLEDRDDE 549
Query: 546 YRTMLDEKLQMAGDSGLIQVYSTELGNRLAS 576
Y+ +LDEKL MA DSGLIQVY+ E GNRL S
Sbjct: 550 YKKILDEKLHMADDSGLIQVYNKEFGNRLVS 580
>gi|30268668|dbj|BAC76005.1| RelA-SpoT like protein RSH4 [Nicotiana tabacum]
Length = 552
Score = 792 bits (2046), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/542 (71%), Positives = 468/542 (86%), Gaps = 7/542 (1%)
Query: 35 SIRAESSSSSFASSPAPLPSTAGEKMVVKLVGAFNELTERMN--VLSSSSSRLLFKALKL 92
++R +S+ + ++P G KMVV+LVGAFNELTERM+ VLS+SSSRLLFKALKL
Sbjct: 16 TVRVSASAEALVATP----EQPGGKMVVELVGAFNELTERMDNKVLSTSSSRLLFKALKL 71
Query: 93 SIPMLQSLPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDR 152
IP+LQSLPL+PD R+PL++ALSVA++LADL+MDAEVIS GLLR+V+E+G +SI VRDR
Sbjct: 72 CIPILQSLPLAPDGRAPLSRALSVAVILADLRMDAEVISTGLLREVLEAGAISIYDVRDR 131
Query: 153 IGIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRH 212
IG TAHLLHESLRVK+ ++LK++VLDD++A ALRKFCLTYYD+RAL+LDLAI+LDMMRH
Sbjct: 132 IGTSTAHLLHESLRVKH-MSLKVEVLDDDSATALRKFCLTYYDVRALVLDLAIKLDMMRH 190
Query: 213 LDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHE 272
LDYLPRY+Q MISLEVMK+HAPLAHA+ TN LS ELEDLSFRYLFP+SYL++D WLRSHE
Sbjct: 191 LDYLPRYRQQMISLEVMKLHAPLAHAIGTNLLSLELEDLSFRYLFPYSYLYLDAWLRSHE 250
Query: 273 TGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDV 332
+G+KPLIDI KEQLLQ L +D L +V +SV+GRYKSRYSTMKKLL+DGR +EVND+
Sbjct: 251 SGNKPLIDICKEQLLQSLNSDPLLMQMVSKISVEGRYKSRYSTMKKLLRDGRKLDEVNDI 310
Query: 333 LGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMA 392
LGLRV++ P S V+ E+GE+ACY RE++ SLWKE+P R+KDYI RPKANGY+SLHMA
Sbjct: 311 LGLRVVLTPLSAGVDEMEIGEKACYRAREVVLSLWKEIPSRSKDYILRPKANGYKSLHMA 370
Query: 393 VDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELA 452
VD S+ +TRPLMEIQIRT EMD+LA GTASHA YKGG+T+PEEAK LKAIM+AAAE A
Sbjct: 371 VDTSERDRTRPLMEIQIRTAEMDILAAGGTASHALYKGGVTDPEEAKHLKAIMMAAAEFA 430
Query: 453 ALRLKDIPSTNHKGFEFDWRDRVFRLLDKNGDGRISIEELMEVMEELGAPGEDAREMMQL 512
ALRLKD+PS N KG E D R RVFRLLDKNGDG++SI+ELMEVMEELGAPG+DAREMMQL
Sbjct: 431 ALRLKDLPSGNPKGLETDKRGRVFRLLDKNGDGKLSIDELMEVMEELGAPGDDAREMMQL 490
Query: 513 LDSNSDGSLSSDEFDLFQKQVEFMRNLEDRDDEYRTMLDEKLQMAGDSGLIQVYSTELGN 572
LDSNSDG LSSDEFDLFQ Q+EF+RN+EDRDD+Y+T+L+EKLQMA ++GLI VYS E G+
Sbjct: 491 LDSNSDGFLSSDEFDLFQDQIEFIRNIEDRDDQYQTLLNEKLQMANETGLIHVYSKEQGD 550
Query: 573 RL 574
L
Sbjct: 551 TL 552
>gi|449459802|ref|XP_004147635.1| PREDICTED: GTP pyrophosphokinase-like [Cucumis sativus]
gi|449498783|ref|XP_004160632.1| PREDICTED: GTP pyrophosphokinase-like [Cucumis sativus]
Length = 591
Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/539 (71%), Positives = 460/539 (85%), Gaps = 4/539 (0%)
Query: 40 SSSSSFASSPAPLPSTAGEKMVVKLVGAFNELTERMNVLSSSSSRLLFKALKLSIPMLQS 99
SS+S P +P AG K+VV+L+GAFNELT+RMN+ S+SSS +LF LKLSIP+LQS
Sbjct: 55 SSTSGIPDLPTSVPEQAGGKLVVELIGAFNELTDRMNLTSTSSSVILFVTLKLSIPILQS 114
Query: 100 LPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAH 159
LPL PD RSPL+KALSVAL+LADLQMDAEVIS G+LR+V+E+GG+S+Q+V+++IGI TAH
Sbjct: 115 LPLLPDGRSPLSKALSVALILADLQMDAEVISTGILREVMEAGGISLQEVKNQIGISTAH 174
Query: 160 LLHESLRVKNNVNLKLQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRY 219
LLHESLRVK+ + ++ + DD+++AALRKFCLTYYDIRALILDLA++LDMMR+L LPRY
Sbjct: 175 LLHESLRVKH-IPSRVDIFDDDSSAALRKFCLTYYDIRALILDLALKLDMMRNLQSLPRY 233
Query: 220 QQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLI 279
QQ M+SLEV+KIHAPLA AV N+LS +LEDLSFRYLFP SY +VD+WLRSHE+GSK LI
Sbjct: 234 QQQMVSLEVLKIHAPLAFAVGANFLSLQLEDLSFRYLFPCSYFYVDSWLRSHESGSKSLI 293
Query: 280 DIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVII 339
+ YK+QL Q LK D L ++VED SV+GRYKSR STMKKLLKDGR EEVND+LGLRVI+
Sbjct: 294 ETYKDQLAQSLKNDPILTNMVEDFSVKGRYKSRSSTMKKLLKDGRKLEEVNDILGLRVIL 353
Query: 340 KPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNG 399
KP + +TSE GERACY EII+S WKE+PHRTKDYIARPK NGY+SLHMAVDVS+
Sbjct: 354 KPKAG-TDTSESGERACYRASEIIKSQWKEIPHRTKDYIARPKPNGYKSLHMAVDVSNES 412
Query: 400 KTRPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDI 459
+T+PLMEIQIRT EMD LA GTASH+ YKGGLT+PEEAKRLKA MLAAAELAALRL D
Sbjct: 413 QTKPLMEIQIRTTEMDKLAAGGTASHSLYKGGLTDPEEAKRLKAKMLAAAELAALRLNDF 472
Query: 460 PSTNHKGFEFDWRDRVFRLLDKNGDGRISIEELMEVMEEL--GAPGEDAREMMQLLDSNS 517
PS+N+KG + R RVF LLDKNGDGRISIEEL++VME+L GAPGEDAREMMQLLDSNS
Sbjct: 473 PSSNYKGIHTNQRGRVFGLLDKNGDGRISIEELVDVMEDLGVGAPGEDAREMMQLLDSNS 532
Query: 518 DGSLSSDEFDLFQKQVEFMRNLEDRDDEYRTMLDEKLQMAGDSGLIQVYSTELGNRLAS 576
DGSLSSDEFD FQKQVEF+R+LE+RDD+Y+ +L+ KLQ D+GLIQVYS ELGNRLA+
Sbjct: 533 DGSLSSDEFDFFQKQVEFIRSLENRDDQYKVILNHKLQNDDDTGLIQVYSEELGNRLAT 591
>gi|224106980|ref|XP_002314331.1| predicted protein [Populus trichocarpa]
gi|222863371|gb|EEF00502.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/516 (78%), Positives = 461/516 (89%), Gaps = 8/516 (1%)
Query: 56 AGEKMVVKLVGAFNELTERMNVLSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTKALS 115
AG KMVV+LVGAFNELTERMNVLS+SSSR+LFKALKLSIP+LQ+LPLSPD RSPL KALS
Sbjct: 16 AGGKMVVELVGAFNELTERMNVLSTSSSRILFKALKLSIPILQNLPLSPDHRSPLNKALS 75
Query: 116 VALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKL 175
+ALLLADLQMDAEVISAG+L QV E+ ++I++VRD+IG GTAHLLHES R+KN+ + ++
Sbjct: 76 LALLLADLQMDAEVISAGILMQVFETSAITIREVRDKIGSGTAHLLHESWRMKNSPS-RI 134
Query: 176 QVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPL 235
+VLDD++A ALRKFCLTYYDIRA+IL+LA +LDMMRHLDYLPRYQQ M+SL+VMKI+APL
Sbjct: 135 EVLDDDSAYALRKFCLTYYDIRAVILELATKLDMMRHLDYLPRYQQQMLSLQVMKIYAPL 194
Query: 236 AHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDAT 295
AHAV TN+LS ELEDLSFRYLFP+SYL+VDTWLRSH TG +PLID+Y E+L Q LK D
Sbjct: 195 AHAVGTNWLSLELEDLSFRYLFPYSYLYVDTWLRSHVTGGRPLIDMYVEELRQSLKADPV 254
Query: 296 LADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERA 355
LAD+VEDV V+GRYKSRYS MKKLLKDGR PEEVNDVLGLRV++KP S E+GE+A
Sbjct: 255 LADMVEDVLVKGRYKSRYSMMKKLLKDGRKPEEVNDVLGLRVVLKPKSG-----EIGEKA 309
Query: 356 CYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMD 415
CY T I++SLW E+PHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRT +MD
Sbjct: 310 CYRTCGIVRSLWNEIPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTVDMD 369
Query: 416 MLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFEFDWRDRV 475
+LAV GTASH+ YKGGL +P+EAKRLKAIM+AAAELAALRLKD+PS KG D RDRV
Sbjct: 370 LLAVGGTASHSLYKGGLADPDEAKRLKAIMMAAAELAALRLKDLPSA--KGIAIDQRDRV 427
Query: 476 FRLLDKNGDGRISIEELMEVMEELGAPGEDAREMMQLLDSNSDGSLSSDEFDLFQKQVEF 535
F+LLDKNGDGRISIEELMEVMEELGAPGEDAREMMQLLDSNSDGSLS DEFD FQKQVEF
Sbjct: 428 FQLLDKNGDGRISIEELMEVMEELGAPGEDAREMMQLLDSNSDGSLSPDEFDTFQKQVEF 487
Query: 536 MRNLEDRDDEYRTMLDEKLQMAGDSGLIQVYSTELG 571
M NLED+D +YR+ML+EKLQMA DSGLIQVYS ELG
Sbjct: 488 MHNLEDKDHQYRSMLNEKLQMAEDSGLIQVYSKELG 523
>gi|307136207|gb|ADN34045.1| guanosine-3'5'-bis(diphosphate) 3'-pyrophosphohydrolase [Cucumis
melo subsp. melo]
Length = 588
Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/539 (71%), Positives = 458/539 (84%), Gaps = 7/539 (1%)
Query: 40 SSSSSFASSPAPLPSTAGEKMVVKLVGAFNELTERMNVLSSSSSRLLFKALKLSIPMLQS 99
SS+S P +P AG K+VV+L+GAFNELT+RMN+ S+SSS +LF LKLSIP+LQS
Sbjct: 55 SSTSGIPDLPTSVPEQAGGKLVVELIGAFNELTDRMNLTSTSSSVILFVTLKLSIPILQS 114
Query: 100 LPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAH 159
LPL PD RSPL+KAL VAL+LADLQMDAEVISAG+LR+V+E+GG+S+Q+V+++IGI TAH
Sbjct: 115 LPLLPDGRSPLSKALCVALILADLQMDAEVISAGILREVMEAGGISLQEVKNQIGISTAH 174
Query: 160 LLHESLRVKNNVNLKLQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRY 219
LLHESLRVK+ + ++ + DD+++AALRKFCLTYYDIRALILDLA++LDMMR+L LPRY
Sbjct: 175 LLHESLRVKH-IPSRVDIFDDDSSAALRKFCLTYYDIRALILDLALKLDMMRNLQSLPRY 233
Query: 220 QQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLI 279
QQ M+SLEV+KIHAPLA AV N+LS +LEDLSFRYLFP SY +VD+WLRSHE+GS LI
Sbjct: 234 QQQMVSLEVLKIHAPLAFAVGANFLSLQLEDLSFRYLFPCSYFYVDSWLRSHESGSTSLI 293
Query: 280 DIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVII 339
+ YK+QL Q LK D L ++VED+SV+GRYKSR STMKKLLKDGR EEVND+LGLRVI+
Sbjct: 294 ETYKDQLAQSLKNDPILTNMVEDISVKGRYKSRSSTMKKLLKDGRKLEEVNDILGLRVIL 353
Query: 340 KPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNG 399
KP + +++GERACY EII+S WKE+PHRTKDYIA PK NGY+SLHMAVDVS+
Sbjct: 354 KPKAG----TDMGERACYRACEIIKSQWKEIPHRTKDYIASPKPNGYKSLHMAVDVSNES 409
Query: 400 KTRPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDI 459
+T+PLMEIQIRT EMD LA GTASH+ YKGGLT+PEEAKRLKA MLAAAELAALRL D
Sbjct: 410 QTKPLMEIQIRTTEMDKLAAGGTASHSLYKGGLTDPEEAKRLKAKMLAAAELAALRLNDF 469
Query: 460 PSTNHKGFEFDWRDRVFRLLDKNGDGRISIEELMEVMEEL--GAPGEDAREMMQLLDSNS 517
PS+N++G + R RVF LLDKNGDGRISIEEL++VME+L GAPGEDAREMMQLLDSNS
Sbjct: 470 PSSNYRGIHTNQRGRVFGLLDKNGDGRISIEELVDVMEDLGVGAPGEDAREMMQLLDSNS 529
Query: 518 DGSLSSDEFDLFQKQVEFMRNLEDRDDEYRTMLDEKLQMAGDSGLIQVYSTELGNRLAS 576
DGSLSSDEFD FQKQVEF+R+LE+RDD+Y+ +L+ KLQ DSGLIQVYS ELGNRLA+
Sbjct: 530 DGSLSSDEFDFFQKQVEFIRSLENRDDQYKAILNHKLQNDDDSGLIQVYSEELGNRLAT 588
>gi|30684538|ref|NP_188374.2| Ca2+-activated RelA/spot-like protein [Arabidopsis thaliana]
gi|29824407|gb|AAP04163.1| unknown protein [Arabidopsis thaliana]
gi|110737231|dbj|BAF00563.1| hypothetical protein [Arabidopsis thaliana]
gi|332642437|gb|AEE75958.1| Ca2+-activated RelA/spot-like protein [Arabidopsis thaliana]
Length = 583
Score = 746 bits (1927), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/588 (67%), Positives = 478/588 (81%), Gaps = 18/588 (3%)
Query: 1 MEVLQPIPNVKIPKLNTFTNMRTRRIPAPRL-----NSHSIRAESSSSSFASSPAPLPST 55
M V++P P + IP+ + + RR+ + +L + R+E ++ S+ A P
Sbjct: 1 MSVIRPSP-IPIPRCRS--QVLHRRLYSIQLIQRRRRRWNPRSEVEDTAIEST-ARSPEA 56
Query: 56 AGEKMVVKLVGAFNELTERMNV--LSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTKA 113
AG KMVV+LVGAFNE+TERMN LS+SSSRLLFKALKLSIP+LQSLPL+ D RSPL+KA
Sbjct: 57 AGGKMVVELVGAFNEVTERMNSVWLSTSSSRLLFKALKLSIPILQSLPLASDGRSPLSKA 116
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
LS++++LADLQMDAEVISA +L +VV++ +SI +VRD IG GTAHLLHE RVKN +
Sbjct: 117 LSLSIILADLQMDAEVISASILSEVVDANAISIYEVRDHIGTGTAHLLHEIFRVKN-IPF 175
Query: 174 KLQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHA 233
K+ VLDDETAA+LRKF LTYYDIRA+I+DL +LD MRHLD+LPRY+Q ++SLEV+KI++
Sbjct: 176 KVDVLDDETAASLRKFYLTYYDIRAVIMDLVSKLDEMRHLDHLPRYRQQILSLEVLKIYS 235
Query: 234 PLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTD 293
PLAHAV N+LS ELED+SFRYLFP SY+++D+WLR HE GSKPLID+YKEQL + LK D
Sbjct: 236 PLAHAVGANHLSLELEDISFRYLFPCSYIYLDSWLRGHENGSKPLIDVYKEQLHRSLKDD 295
Query: 294 ATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGE 353
LA++V DV ++GRYKSRYS MKKLL+DGR PEEVNDVLGLRVI+ P+S +VN EVGE
Sbjct: 296 LVLAEMVNDVYIKGRYKSRYSMMKKLLRDGRKPEEVNDVLGLRVILMPNS-VVNDVEVGE 354
Query: 354 RACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEE 413
+ACY T EII+SLWKE+PHRTKDYIARPK NGYRSLHMAVDVSD+ + RPLMEIQIRT +
Sbjct: 355 KACYRTSEIIRSLWKEIPHRTKDYIARPKENGYRSLHMAVDVSDSDQIRPLMEIQIRTMD 414
Query: 414 MDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFE--FDW 471
MD A GTASH+ YKGGLT+P+EAKRLKAIMLAAA+LAA+RLKDI S H+ F+ +
Sbjct: 415 MDGSANAGTASHSLYKGGLTDPKEAKRLKAIMLAAADLAAIRLKDISSNKHQSFKTTTNQ 474
Query: 472 RDRVFRLLDKNGDGRISIEELMEVMEELGAPGEDAREMMQLLDSNSDGSLSSDEFDLFQK 531
RDRVF LLDKNGDG ISIEELMEVMEELGAPGEDA EMMQLLDSNSDGSLSSDEFD FQK
Sbjct: 475 RDRVFCLLDKNGDGMISIEELMEVMEELGAPGEDAEEMMQLLDSNSDGSLSSDEFDTFQK 534
Query: 532 QVEFMRNLEDRDDEYRTMLDEKLQ---MAGDSGLIQVYSTELGNRLAS 576
QVEFMR EDRD+EY+++LDEKL +GLIQ+Y+ EL +RL++
Sbjct: 535 QVEFMRKWEDRDNEYKSLLDEKLHDLPHQDTTGLIQLYNKELEDRLST 582
>gi|297830360|ref|XP_002883062.1| RelA/SpoT domain-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297328902|gb|EFH59321.1| RelA/SpoT domain-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 583
Score = 743 bits (1919), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/588 (67%), Positives = 478/588 (81%), Gaps = 18/588 (3%)
Query: 1 MEVLQPIPNVKIPKLNTFTNMRTRRIPAPRL-----NSHSIRAESSSSSFASSPAPLPST 55
M V++P P + IP+ + + RR+ + +L + R+E ++ S+ A P
Sbjct: 1 MSVIRPSP-IPIPRCRS--QLLHRRLYSIQLIQRRRRRWNPRSEVEDTAVEST-ARSPEA 56
Query: 56 AGEKMVVKLVGAFNELTERMNV--LSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTKA 113
AG KMVV+LVGAFNE+TERMN LS+SSSRLLFKALKLSIP+LQSLPL+ D RSPL+KA
Sbjct: 57 AGGKMVVELVGAFNEVTERMNSVWLSTSSSRLLFKALKLSIPILQSLPLASDGRSPLSKA 116
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
LS++++LADLQMDAEVISA +L +VVE+ +SI +VRD+IG GTAHLLHE RVKN +
Sbjct: 117 LSLSIILADLQMDAEVISASILSEVVEAKAISIYEVRDQIGTGTAHLLHEIFRVKN-IPF 175
Query: 174 KLQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHA 233
K+ VLDDETAA+LRKF LTYYDIRA+I+DL +LD MRHLD+LPRY+Q ++SLEV+KI++
Sbjct: 176 KVDVLDDETAASLRKFYLTYYDIRAVIMDLVSKLDEMRHLDHLPRYRQQILSLEVLKIYS 235
Query: 234 PLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTD 293
PLAHAV N+LS ELED+SFRYLFP SYL++D+WLR HE GSKPLID+YKEQL LK D
Sbjct: 236 PLAHAVGANHLSLELEDISFRYLFPCSYLYLDSWLRGHENGSKPLIDMYKEQLYLSLKAD 295
Query: 294 ATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGE 353
LA++V+DV ++GRYKSRYS MKKLL+DGR PEEVNDVLGLRVI+ P+S + N EVGE
Sbjct: 296 LVLAEMVDDVYIKGRYKSRYSMMKKLLRDGRKPEEVNDVLGLRVILIPNS-VTNDVEVGE 354
Query: 354 RACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEE 413
+ACY T EII+SLWKE+PHRTKDYIARPKANGY+SLHMAVDVSD+ +TRPLMEIQIRT +
Sbjct: 355 KACYRTSEIIRSLWKEIPHRTKDYIARPKANGYKSLHMAVDVSDSDQTRPLMEIQIRTMD 414
Query: 414 MDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFE--FDW 471
MD A GTASH+ YKGGLT+P+EAKRLKAIM+AAA+LAA+RLKD+ S H+ F+ +
Sbjct: 415 MDGSANAGTASHSLYKGGLTDPKEAKRLKAIMMAAADLAAIRLKDLSSNKHQSFKTTTNQ 474
Query: 472 RDRVFRLLDKNGDGRISIEELMEVMEELGAPGEDAREMMQLLDSNSDGSLSSDEFDLFQK 531
RDRVF LLDKNGDG ISIEELMEVMEELGAPGEDA EMMQLLDSNSDGSLSSDEF FQK
Sbjct: 475 RDRVFCLLDKNGDGMISIEELMEVMEELGAPGEDAEEMMQLLDSNSDGSLSSDEFYTFQK 534
Query: 532 QVEFMRNLEDRDDEYRTMLDEKLQ---MAGDSGLIQVYSTELGNRLAS 576
QVEFMR EDRD+EY+++LDEKL +GLIQ+Y EL +RL++
Sbjct: 535 QVEFMRKWEDRDNEYKSLLDEKLHDLPHQDTTGLIQLYKKELEDRLST 582
>gi|307590972|gb|ADN65134.1| RelA/SpoT and calcium-binding EF-hand domain containing protein
[Ipomoea nil]
Length = 559
Score = 728 bits (1880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/508 (74%), Positives = 439/508 (86%), Gaps = 5/508 (0%)
Query: 53 PSTAGEKMVVKLVGAFNELTERMNV--LSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPL 110
P G KMV +LVGAFN LT RMN LS+SSS LLFK LKLSIP+LQSLPLSPD RSPL
Sbjct: 50 PEHPGGKMVAELVGAFNHLTHRMNTAALSTSSSHLLFKTLKLSIPLLQSLPLSPDGRSPL 109
Query: 111 TKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNN 170
+KALS+AL+LADLQMDAEVIS G+LRQV+E+G +SI +V+ RIG TAHLLHESLRV NN
Sbjct: 110 SKALSLALILADLQMDAEVISTGILRQVLEAGAISIYEVKGRIGTTTAHLLHESLRV-NN 168
Query: 171 VNLKLQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMK 230
++ K+Q LD++ + ALRKFCLTYYD+RALILDLA++LD MRHL YLPRY+Q M+SLEVMK
Sbjct: 169 ISSKVQFLDNDNSTALRKFCLTYYDVRALILDLALKLDTMRHLGYLPRYKQQMLSLEVMK 228
Query: 231 IHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCL 290
IHAPLAHA+ N LS ELEDLSF+YLFP+SYL++D WLRSHETGSKPLID+YKEQLL L
Sbjct: 229 IHAPLAHAIGMNLLSVELEDLSFQYLFPYSYLYLDAWLRSHETGSKPLIDVYKEQLLNSL 288
Query: 291 KTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSE 350
+DA LA++V+++SV+GRYKSRYS MKKLL+DGR EEVND+LGLRVI+ P+S N SE
Sbjct: 289 TSDAILAEMVDNISVEGRYKSRYSAMKKLLRDGRKLEEVNDILGLRVILSPASG-KNESE 347
Query: 351 VGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSD-NGKTRPLMEIQI 409
VG +ACY TREI+QSLW+E+P R+KDYIA+PKANGY+SLHMAVD+S+ NG RPLMEIQI
Sbjct: 348 VGVKACYRTREIVQSLWQEIPSRSKDYIAKPKANGYKSLHMAVDISEKNGHNRPLMEIQI 407
Query: 410 RTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFEF 469
RT MDMLA GTASHA YKGGLT+PEEA+RLKAIM+AAAELAALRLKD+PSTN K +
Sbjct: 408 RTSYMDMLAAGGTASHALYKGGLTDPEEARRLKAIMMAAAELAALRLKDLPSTNPKDLDV 467
Query: 470 DWRDRVFRLLDKNGDGRISIEELMEVMEELGAPGEDAREMMQLLDSNSDGSLSSDEFDLF 529
D RD F LLDKNGDG+ISIEELMEVMEELGA GEDAREMMQLLDSN+D LSSDEFDLF
Sbjct: 468 DNRDMAFHLLDKNGDGKISIEELMEVMEELGAQGEDAREMMQLLDSNNDSLLSSDEFDLF 527
Query: 530 QKQVEFMRNLEDRDDEYRTMLDEKLQMA 557
QKQ+EFMR+LE RD+ Y+T+L+EKLQ+
Sbjct: 528 QKQIEFMRDLEYRDNHYKTLLNEKLQIT 555
>gi|9294134|dbj|BAB02036.1| unnamed protein product [Arabidopsis thaliana]
Length = 456
Score = 639 bits (1648), Expect = e-180, Method: Compositional matrix adjust.
Identities = 326/457 (71%), Positives = 385/457 (84%), Gaps = 7/457 (1%)
Query: 125 MDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAA 184
MDAEVISA +L +VV++ +SI +VRD IG GTAHLLHE RVKN + K+ VLDDETAA
Sbjct: 1 MDAEVISASILSEVVDANAISIYEVRDHIGTGTAHLLHEIFRVKN-IPFKVDVLDDETAA 59
Query: 185 ALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYL 244
+LRKF LTYYDIRA+I+DL +LD MRHLD+LPRY+Q ++SLEV+KI++PLAHAV N+L
Sbjct: 60 SLRKFYLTYYDIRAVIMDLVSKLDEMRHLDHLPRYRQQILSLEVLKIYSPLAHAVGANHL 119
Query: 245 SFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVS 304
S ELED+SFRYLFP SY+++D+WLR HE GSKPLID+YKEQL + LK D LA++V DV
Sbjct: 120 SLELEDISFRYLFPCSYIYLDSWLRGHENGSKPLIDVYKEQLHRSLKDDLVLAEMVNDVY 179
Query: 305 VQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQ 364
++GRYKSRYS MKKLL+DGR PEEVNDVLGLRVI+ P+S +VN EVGE+ACY T EII+
Sbjct: 180 IKGRYKSRYSMMKKLLRDGRKPEEVNDVLGLRVILMPNS-VVNDVEVGEKACYRTSEIIR 238
Query: 365 SLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTAS 424
SLWKE+PHRTKDYIARPK NGYRSLHMAVDVSD+ + RPLMEIQIRT +MD A GTAS
Sbjct: 239 SLWKEIPHRTKDYIARPKENGYRSLHMAVDVSDSDQIRPLMEIQIRTMDMDGSANAGTAS 298
Query: 425 HAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFE--FDWRDRVFRLLDKN 482
H+ YKGGLT+P+EAKRLKAIMLAAA+LAA+RLKDI S H+ F+ + RDRVF LLDKN
Sbjct: 299 HSLYKGGLTDPKEAKRLKAIMLAAADLAAIRLKDISSNKHQSFKTTTNQRDRVFCLLDKN 358
Query: 483 GDGRISIEELMEVMEELGAPGEDAREMMQLLDSNSDGSLSSDEFDLFQKQVEFMRNLEDR 542
GDG ISIEELMEVMEELGAPGEDA EMMQLLDSNSDGSLSSDEFD FQKQVEFMR EDR
Sbjct: 359 GDGMISIEELMEVMEELGAPGEDAEEMMQLLDSNSDGSLSSDEFDTFQKQVEFMRKWEDR 418
Query: 543 DDEYRTMLDEKLQ---MAGDSGLIQVYSTELGNRLAS 576
D+EY+++LDEKL +GLIQ+Y+ EL +RL++
Sbjct: 419 DNEYKSLLDEKLHDLPHQDTTGLIQLYNKELEDRLST 455
>gi|242087013|ref|XP_002439339.1| hypothetical protein SORBIDRAFT_09g004640 [Sorghum bicolor]
gi|241944624|gb|EES17769.1| hypothetical protein SORBIDRAFT_09g004640 [Sorghum bicolor]
Length = 581
Score = 632 bits (1630), Expect = e-178, Method: Compositional matrix adjust.
Identities = 330/526 (62%), Positives = 414/526 (78%), Gaps = 10/526 (1%)
Query: 51 PLPSTAGEKMVVKLVGAFNELTERM--NVLSSSSSRLLFKALKLSIPMLQSLPLSPDSRS 108
PLP+ G ++VV+LV AFNELTERM ++ +SSSSRLLF+ALKL++P L+ + D
Sbjct: 61 PLPADGGGRLVVELVCAFNELTERMGEDLATSSSSRLLFRALKLALPALRDV----DGGR 116
Query: 109 PLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVK 168
L +AL+V LADLQMDAEVISAG+LR+ +++G VS++ V+ +IG T HLLH+SLR+K
Sbjct: 117 ALARALAVGATLADLQMDAEVISAGILREALDAGAVSMRDVKTQIGTSTTHLLHDSLRIK 176
Query: 169 NNVNLKLQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + KL VLDDE+A+ALR F L+YYDIRA+IL++A+ LDMMRHLDY+P+Y Q + SLEV
Sbjct: 177 HAPS-KLDVLDDESASALRSFILSYYDIRAVILEIALMLDMMRHLDYVPKYLQQIKSLEV 235
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
MKI+APLAHAV LS ELEDLSFRYLFP SY VD WLRS E+ K +I++YKEQLL+
Sbjct: 236 MKIYAPLAHAVGAGNLSLELEDLSFRYLFPHSYDHVDQWLRSQESDCKAIINLYKEQLLE 295
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L+ D L +V+D+S+QGRYKSR+STMKKL+KDGR PEEV D+LGLRVI++P + N+
Sbjct: 296 ALQADNELQRIVQDISIQGRYKSRFSTMKKLVKDGRKPEEVKDILGLRVILEPRCD-ENS 354
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
S+ G RAC T EIIQ++WKE+P RTK+YI PK NGY+SLH+A+DVS+ GK RPLMEIQ
Sbjct: 355 SDWGPRACLRTYEIIQAMWKEVPGRTKNYITHPKRNGYQSLHVAIDVSEPGKVRPLMEIQ 414
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFE 468
IRT+EM AV G ASH+ YKGGLT+PEEAKRLK IMLAAAELAALRL+D+P ++
Sbjct: 415 IRTKEMHRFAVGGEASHSLYKGGLTDPEEAKRLKTIMLAAAELAALRLRDLPGSDRGA-- 472
Query: 469 FDWRDRVFRLLDKNGDGRISIEELMEVMEELGAPGEDAREMMQLLDSNSDGSLSSDEFDL 528
+ ++ F LDKNGDGRISIEEL EVME+LGA GEDA E+M LLD+NSDGSLSSDEF+
Sbjct: 473 GNCKNPAFCQLDKNGDGRISIEELTEVMEDLGAGGEDATELMHLLDANSDGSLSSDEFES 532
Query: 529 FQKQVEFMRNLEDRDDEYRTMLDEKLQMAGDSGLIQVYSTELGNRL 574
FQ+Q+E MRNLED DD YR +L EKL +GLI VY EL ++L
Sbjct: 533 FQRQIEMMRNLEDDDDHYRKILKEKLHTIDSAGLIHVYRKELSDKL 578
>gi|115462249|ref|NP_001054724.1| Os05g0161200 [Oryza sativa Japonica Group]
gi|51038117|gb|AAT93920.1| putative chloroplast RelA [Oryza sativa Japonica Group]
gi|113578275|dbj|BAF16638.1| Os05g0161200 [Oryza sativa Japonica Group]
gi|222630292|gb|EEE62424.1| hypothetical protein OsJ_17215 [Oryza sativa Japonica Group]
Length = 583
Score = 623 bits (1606), Expect = e-175, Method: Compositional matrix adjust.
Identities = 332/521 (63%), Positives = 420/521 (80%), Gaps = 10/521 (1%)
Query: 56 AGEKMVVKLVGAFNELTERMN--VLSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTKA 113
G ++V +LVGAFNELT RM + +SSSSRLLF+ALKL++P L+ D L +A
Sbjct: 68 GGGRLVAELVGAFNELTGRMGEGLATSSSSRLLFRALKLALPALRD----GDGGRALARA 123
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L++A LADLQMDAEVISAG+LR+ +++G +S++ V+ IGI TAHLLHESLR+K+ +
Sbjct: 124 LAIAASLADLQMDAEVISAGILREALDAGAISMRDVKSEIGISTAHLLHESLRLKHAPS- 182
Query: 174 KLQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHA 233
KL VLDDE+A+ALRKFCL+YYDIRA+IL+LA++LDMMRHLD LPRY Q + SLEV+KI+A
Sbjct: 183 KLDVLDDESASALRKFCLSYYDIRAVILELALKLDMMRHLDCLPRYLQRIKSLEVLKIYA 242
Query: 234 PLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTD 293
PLAHAV LS ELEDLSFRYLFP SY +D WLRS ET +K LID YKEQLLQ LK D
Sbjct: 243 PLAHAVGAGNLSLELEDLSFRYLFPHSYDHIDQWLRSQETENKLLIDSYKEQLLQALKDD 302
Query: 294 ATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGE 353
L+ +V+D+S+QGRYKSR+STMKKL+KDGR PEEVND+L LRVI++P + ++ + G
Sbjct: 303 DELSQIVQDISIQGRYKSRFSTMKKLVKDGRKPEEVNDILALRVILEPRCD-GSSLDWGP 361
Query: 354 RACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEE 413
RAC+ T EIIQ++WKE+P RTK+Y+ RPK NGY+SLH+A+DVS+ GK RPLMEIQIRT+E
Sbjct: 362 RACHRTHEIIQAMWKEVPGRTKNYVTRPKENGYQSLHVAIDVSEPGKMRPLMEIQIRTKE 421
Query: 414 MDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFEFDWRD 473
M AV G ASH+ YKGGLT+P EAKRLKAIMLAAAELAA+RL+D+P+++ + + +
Sbjct: 422 MHKFAVGGEASHSLYKGGLTDPGEAKRLKAIMLAAAELAAMRLRDLPASDQG--DSNCTN 479
Query: 474 RVFRLLDKNGDGRISIEELMEVMEELGAPGEDAREMMQLLDSNSDGSLSSDEFDLFQKQV 533
R F LDKNGDGRISIEEL EVME+LGA G+DA+E+M LLD+NSDGSLSSDEF+ FQ+Q+
Sbjct: 480 RAFCQLDKNGDGRISIEELTEVMEDLGAGGKDAKELMHLLDANSDGSLSSDEFEAFQRQI 539
Query: 534 EFMRNLEDRDDEYRTMLDEKLQMAGDSGLIQVYSTELGNRL 574
E MR+L+D+DD YR +L EKLQ +GLIQVY +LG++L
Sbjct: 540 ELMRSLDDKDDRYRKILKEKLQTIDSAGLIQVYRKQLGDKL 580
>gi|125550942|gb|EAY96651.1| hypothetical protein OsI_18565 [Oryza sativa Indica Group]
Length = 922
Score = 621 bits (1601), Expect = e-175, Method: Compositional matrix adjust.
Identities = 332/521 (63%), Positives = 420/521 (80%), Gaps = 10/521 (1%)
Query: 56 AGEKMVVKLVGAFNELTERMN--VLSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTKA 113
G ++V +LVGAFNELT RM + +SSSSRLLF+ALKL++P L+ D L +A
Sbjct: 68 GGGRLVAELVGAFNELTGRMGEGLATSSSSRLLFRALKLALPALRD----GDGGRALARA 123
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L++A LADLQMDAEVISAG+LR+ +++G +S++ V+ IGI TAHLLHESLR+K+ +
Sbjct: 124 LAIAASLADLQMDAEVISAGILREALDAGAISMRDVKSEIGISTAHLLHESLRLKHAPS- 182
Query: 174 KLQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHA 233
KL VLDDE+A+ALRKFCL+YYDIRA+IL+LA++LDMM+HLD LPRY Q + SLEV+KI+A
Sbjct: 183 KLDVLDDESASALRKFCLSYYDIRAVILELALKLDMMKHLDCLPRYLQRIKSLEVLKIYA 242
Query: 234 PLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTD 293
PLAHAV LS ELEDLSFRYLFP SY +D WLRS ET +K LID YKEQLLQ LK D
Sbjct: 243 PLAHAVGAGNLSLELEDLSFRYLFPHSYDHIDQWLRSQETENKLLIDSYKEQLLQALKDD 302
Query: 294 ATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGE 353
L+ +V+D+S+QGRYKSR+STMKKL+KDGR PEEVND+L LRVI++P + ++ + G
Sbjct: 303 DELSQIVQDISIQGRYKSRFSTMKKLVKDGRKPEEVNDILALRVILEPRCD-GSSLDWGP 361
Query: 354 RACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEE 413
RAC+ T EIIQ++WKE+P RTKDY+ RPK NGY+SLH+A+DVS+ GK RPLMEIQIRT+E
Sbjct: 362 RACHRTHEIIQAMWKEVPGRTKDYVTRPKENGYQSLHVAIDVSEPGKMRPLMEIQIRTKE 421
Query: 414 MDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFEFDWRD 473
M AV G ASH+ YKGGLT+P EAKRLKAIMLAAAELAA+RL+D+P+++ + + +
Sbjct: 422 MHKFAVGGEASHSLYKGGLTDPGEAKRLKAIMLAAAELAAMRLRDLPASDQG--DSNCTN 479
Query: 474 RVFRLLDKNGDGRISIEELMEVMEELGAPGEDAREMMQLLDSNSDGSLSSDEFDLFQKQV 533
R F LDKNGDGRISIEEL EVME+LGA G+DA+E+M LLD+NSDGSLSSDEF+ FQ+Q+
Sbjct: 480 RAFCQLDKNGDGRISIEELTEVMEDLGAGGKDAKELMHLLDANSDGSLSSDEFEAFQRQI 539
Query: 534 EFMRNLEDRDDEYRTMLDEKLQMAGDSGLIQVYSTELGNRL 574
E MR+L+D+DD YR +L EKLQ +GLIQVY +LG++L
Sbjct: 540 ELMRSLDDKDDRYRKILKEKLQTIDSAGLIQVYRKQLGDKL 580
>gi|12583663|dbj|BAB21485.1| chloroplast RelA homologue 2 [Oryza sativa Japonica Group]
Length = 583
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 331/521 (63%), Positives = 420/521 (80%), Gaps = 10/521 (1%)
Query: 56 AGEKMVVKLVGAFNELTERMN--VLSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTKA 113
G ++V +LVGAFNELT RM + +SSSSRLLF+ALKL++P L+ D L +A
Sbjct: 68 GGGRLVAELVGAFNELTGRMGEGLATSSSSRLLFRALKLALPALRD----GDGGRALARA 123
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L++A LADLQMDAEVISAG+LR+ +++G +S++ V+ IGI TAHLLHESLR+K+ +
Sbjct: 124 LAIAASLADLQMDAEVISAGILREALDAGAISMRDVKSEIGISTAHLLHESLRLKHAPS- 182
Query: 174 KLQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHA 233
KL VLDDE+A+ALRKFCL+YYDIRA+IL+LA++LDMMRHL+ LPRY Q + SLEV+KI+A
Sbjct: 183 KLDVLDDESASALRKFCLSYYDIRAVILELALKLDMMRHLNCLPRYLQRIKSLEVLKIYA 242
Query: 234 PLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTD 293
PLAHAV LS ELEDLSFRYLFP SY +D WLRS ET +K LID YKEQLLQ LK D
Sbjct: 243 PLAHAVGAGNLSLELEDLSFRYLFPHSYDHIDQWLRSQETENKLLIDSYKEQLLQALKDD 302
Query: 294 ATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGE 353
L+ +V+D+S+QGRYKSR+STMKKL+KDGR PEEVND+L LRVI++P + ++ + G
Sbjct: 303 DELSQIVQDISIQGRYKSRFSTMKKLVKDGRKPEEVNDILALRVILEPRCD-GSSLDWGP 361
Query: 354 RACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEE 413
RAC+ T EIIQ++WKE+P RTK+Y+ RPK NGY+SLH+A+DVS+ GK RPLMEIQIRT+E
Sbjct: 362 RACHRTHEIIQAMWKEVPGRTKNYVTRPKENGYQSLHVAIDVSEPGKMRPLMEIQIRTKE 421
Query: 414 MDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFEFDWRD 473
M AV G ASH+ YKGGLT+P EAKRLKAIMLAAAELAA+RL+D+P+++ + + +
Sbjct: 422 MHKFAVGGEASHSLYKGGLTDPGEAKRLKAIMLAAAELAAMRLRDLPASDQG--DSNCTN 479
Query: 474 RVFRLLDKNGDGRISIEELMEVMEELGAPGEDAREMMQLLDSNSDGSLSSDEFDLFQKQV 533
R F LDKNGDGRISIEEL EVME+LGA G+DA+E+M LLD+NSDGSLSSDEF+ FQ+Q+
Sbjct: 480 RAFCQLDKNGDGRISIEELTEVMEDLGAGGKDAKELMHLLDANSDGSLSSDEFEAFQRQI 539
Query: 534 EFMRNLEDRDDEYRTMLDEKLQMAGDSGLIQVYSTELGNRL 574
E MR+L+D+DD YR +L EKLQ +GLIQVY +LG++L
Sbjct: 540 ELMRSLDDKDDRYRKILKEKLQTIDSAGLIQVYRKQLGDKL 580
>gi|326514826|dbj|BAJ99774.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 579
Score = 617 bits (1590), Expect = e-174, Method: Compositional matrix adjust.
Identities = 325/524 (62%), Positives = 410/524 (78%), Gaps = 10/524 (1%)
Query: 53 PSTAGEKMVVKLVGAFNELTERMN--VLSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPL 110
P G ++V +LVG FNELT RM + ++SSSRLLF+ALKL++P L+ D L
Sbjct: 61 PPEGGGRLVAELVGVFNELTARMGEGLATTSSSRLLFRALKLALPALRD----GDGGQAL 116
Query: 111 TKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNN 170
T+AL+VA LADLQMDAEVISAG+LR+ +++G +SI V +IG G A LLHESLR+K
Sbjct: 117 TRALAVAATLADLQMDAEVISAGILRKALDAGTISISDVEAQIGTGIADLLHESLRLKVA 176
Query: 171 VNLKLQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMK 230
+ K+ VLDDE+A++LRKF L+YYDIRA+IL+LA++LD MRHL YLP++ Q + SLEVMK
Sbjct: 177 PS-KVDVLDDESASSLRKFFLSYYDIRAVILELALKLDTMRHLQYLPKHLQRVKSLEVMK 235
Query: 231 IHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCL 290
I+APLAHAV LS ELEDLSFRYLFP SY VD WLR+ E K LI+ YK QLLQ L
Sbjct: 236 IYAPLAHAVGAGNLSLELEDLSFRYLFPHSYDHVDQWLRNREAECKLLINAYKAQLLQAL 295
Query: 291 KTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSE 350
K+D L ++V+D+S++GRYKSR+STMKKL+KDGR PEEVND+LGLR+I+ P +S+
Sbjct: 296 KSDDELNEIVQDISIEGRYKSRFSTMKKLVKDGRKPEEVNDILGLRIILDPRC-YGGSSD 354
Query: 351 VGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIR 410
G RAC+ T EII++L KE+P RTKDY+ +PK NGY+SLH+A+DVS+ GKTRPLMEIQIR
Sbjct: 355 WGPRACHRTHEIIRALLKEVPGRTKDYVTQPKRNGYQSLHVAIDVSEPGKTRPLMEIQIR 414
Query: 411 TEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFEFD 470
T+EM +A+ G ASH+ YKGGLT+P EAKRLKAIMLAAAELAALRL+D+P++ H+G E
Sbjct: 415 TKEMHRIAIGGEASHSLYKGGLTDPGEAKRLKAIMLAAAELAALRLRDLPASGHRGGE-- 472
Query: 471 WRDRVFRLLDKNGDGRISIEELMEVMEELGAPGEDAREMMQLLDSNSDGSLSSDEFDLFQ 530
+++ F L+DKNGDGRISIEEL EVME+LGA GEDA +M LLD+NSDGSLS DEF+ FQ
Sbjct: 473 CKNQAFCLIDKNGDGRISIEELTEVMEDLGAEGEDAMALMHLLDANSDGSLSFDEFESFQ 532
Query: 531 KQVEFMRNLEDRDDEYRTMLDEKLQMAGDSGLIQVYSTELGNRL 574
+QVE MR+LEDRDD Y +L +KLQ +GLI Y ELG++L
Sbjct: 533 RQVELMRSLEDRDDHYTKILKDKLQTIDSAGLIHFYRKELGDKL 576
>gi|357134518|ref|XP_003568864.1| PREDICTED: GTP pyrophosphokinase-like [Brachypodium distachyon]
Length = 578
Score = 613 bits (1580), Expect = e-173, Method: Compositional matrix adjust.
Identities = 323/521 (61%), Positives = 413/521 (79%), Gaps = 7/521 (1%)
Query: 56 AGEKMVVKLVGAFNELTERMN--VLSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTKA 113
G ++V +LVG FNELT RM + ++SSSRLLF+ALKL++P L+ L++A
Sbjct: 60 GGGRLVAELVGTFNELTGRMGEGLATTSSSRLLFRALKLALPALRGGGDGD-GGRALSRA 118
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA LADLQMDAEVISAG+LR+ +++G +++ V+++IG G A LLHESLR+K +
Sbjct: 119 LAVAATLADLQMDAEVISAGILRKALDAGAINMSDVKEQIGTGIADLLHESLRLKLAPS- 177
Query: 174 KLQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHA 233
K+ +L+DE+ +ALRKF L+YYDIRA+IL+LA++LD MRHL+YLP++ Q + SLEVMKI+A
Sbjct: 178 KVDILNDESVSALRKFFLSYYDIRAVILELALKLDTMRHLEYLPKHLQRIKSLEVMKIYA 237
Query: 234 PLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTD 293
PLAHAV LS ELEDLSFRYLFP SY VD WLR+ E K LI YKEQL+Q LK+D
Sbjct: 238 PLAHAVGAGDLSLELEDLSFRYLFPHSYDHVDQWLRNREAECKFLIKAYKEQLIQALKSD 297
Query: 294 ATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGE 353
L +V+D+SV+GRYKSR+STMKKL+KDGR PEEVND+LGLRVI+ P + V + + G
Sbjct: 298 DELNKIVQDISVEGRYKSRFSTMKKLVKDGRKPEEVNDILGLRVILDPRCD-VGSCDWGP 356
Query: 354 RACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEE 413
RACY T EII++LWKE+P RTKDY+ RPK NGY+SLH+A+DVS+ GKTRPLMEIQIRT+E
Sbjct: 357 RACYRTHEIIRTLWKEVPGRTKDYVTRPKRNGYQSLHVAIDVSEPGKTRPLMEIQIRTKE 416
Query: 414 MDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFEFDWRD 473
M ++A+ G ASH+ YKGGLT+P EAKRLKAIMLAAAELAALRL+D+P+++ +G E ++
Sbjct: 417 MHIIAIGGEASHSLYKGGLTDPGEAKRLKAIMLAAAELAALRLRDLPASDSQGGE--CKN 474
Query: 474 RVFRLLDKNGDGRISIEELMEVMEELGAPGEDAREMMQLLDSNSDGSLSSDEFDLFQKQV 533
+ F LLDKNGDGRISIEEL EVME+LGA +DA E+M LLD+NSDGSLS DEF+ FQ+QV
Sbjct: 475 QAFCLLDKNGDGRISIEELTEVMEDLGAGDKDAMELMHLLDANSDGSLSFDEFESFQRQV 534
Query: 534 EFMRNLEDRDDEYRTMLDEKLQMAGDSGLIQVYSTELGNRL 574
E MR+LEDRDD Y +L +KLQM +GLI Y ELG++L
Sbjct: 535 ELMRSLEDRDDHYTKILKDKLQMIDSAGLIHFYRKELGDKL 575
>gi|226531980|ref|NP_001140933.1| hypothetical protein [Zea mays]
gi|194701820|gb|ACF84994.1| unknown [Zea mays]
gi|413944571|gb|AFW77220.1| hypothetical protein ZEAMMB73_710363 [Zea mays]
Length = 572
Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust.
Identities = 327/526 (62%), Positives = 409/526 (77%), Gaps = 11/526 (2%)
Query: 51 PLPSTAGEKMVVKLVGAFNELTERM--NVLSSSSSRLLFKALKLSIPMLQSLPLSPDSRS 108
PLP G ++V +LV AFNELTERM ++ +SSSS LLF+ LKL++P L+ + +
Sbjct: 53 PLPDGGG-RLVAELVCAFNELTERMGEDLATSSSSSLLFRVLKLALPALRDV----EGGR 107
Query: 109 PLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVK 168
L +AL+VA LADLQMDAEVISAG+LR+ +++G V ++ V+ +IGI TAHLLH+SLR+K
Sbjct: 108 ALARALAVAATLADLQMDAEVISAGILREALDAGAVRMRDVKTQIGISTAHLLHDSLRIK 167
Query: 169 NNVNLKLQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + KL VLDDE A+ LR+F L+YYDIRA+IL+L ++LDMMRHLDYLP+Y Q + SLEV
Sbjct: 168 HAPS-KLDVLDDEGASTLRRFILSYYDIRAVILELGMKLDMMRHLDYLPKYLQQIKSLEV 226
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
MKI+APLAHAV LS ELEDLSFRYLFP SY VD WLRS E K +I++YKEQLLQ
Sbjct: 227 MKIYAPLAHAVGAGNLSLELEDLSFRYLFPHSYDHVDQWLRSQEGDCKAIINLYKEQLLQ 286
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L+ D L + +D+S+QGRYKSR+STMKKL+KDGR PEEV D+LGLRVI++P N+
Sbjct: 287 ALQADNELRRIAQDISIQGRYKSRFSTMKKLVKDGRKPEEVKDILGLRVILEPRCG-GNS 345
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
S+ G RAC+ T EIIQ++WKE+P RTKDYI PK NGY+SLH+A+DVS+ GK RPLME+Q
Sbjct: 346 SDWGPRACHRTHEIIQAMWKEIPGRTKDYITHPKRNGYQSLHVAIDVSEPGKVRPLMEVQ 405
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFE 468
IRT+EM AV G ASH+ YKGGLT+P EAKRLK IMLAAAELAALRL+D+P ++H
Sbjct: 406 IRTKEMHRFAVGGEASHSLYKGGLTDPGEAKRLKTIMLAAAELAALRLRDLPGSDH--VV 463
Query: 469 FDWRDRVFRLLDKNGDGRISIEELMEVMEELGAPGEDAREMMQLLDSNSDGSLSSDEFDL 528
+ ++ F LDKNGDGRISIEEL EVME+LGA GEDA E+M LLD+NSDGSLSSDEF+
Sbjct: 464 GNCKNPAFCQLDKNGDGRISIEELTEVMEDLGAGGEDATELMHLLDANSDGSLSSDEFES 523
Query: 529 FQKQVEFMRNLEDRDDEYRTMLDEKLQMAGDSGLIQVYSTELGNRL 574
FQ+Q+E MRNLED D+ YR +L EKL +GLI VY EL ++L
Sbjct: 524 FQRQIEVMRNLEDDDNHYRKILKEKLHTIDSAGLIHVYRKELSDKL 569
>gi|125550945|gb|EAY96654.1| hypothetical protein OsI_18568 [Oryza sativa Indica Group]
Length = 578
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 296/536 (55%), Positives = 387/536 (72%), Gaps = 15/536 (2%)
Query: 53 PSTAGEKMVVKLVGAFNELTERM--NVLSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPL 110
P+ +G +++ +L+G FN LTERM +V +SSSSRLLF+ALKL++P L+ +
Sbjct: 41 PAGSGGRLMAELLGVFNGLTERMGEDVATSSSSRLLFRALKLALPALRDGDGDGGGGQSV 100
Query: 111 TKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNN 170
++AL VA LADLQMDAEVISAG++R +++G +++ V ++G A L+ ESL+VK
Sbjct: 101 SRALVVAASLADLQMDAEVISAGMVRGALDTGALAMADVEAQLGASAAGLVEESLKVKRA 160
Query: 171 VNLKLQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMK 230
+ ++ V D+E A+ALRK CL+ YDIRA+IL+LA++LD M+HLD LP++QQ SLEV+K
Sbjct: 161 PS-EVDVADEEAASALRKRCLSSYDIRAVILELAVKLDAMKHLDVLPKHQQRTTSLEVLK 219
Query: 231 IHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCL 290
+ APLAHAV LS ELEDLSF+ L+P +Y +D WL S E K +I KE+LL+ L
Sbjct: 220 VFAPLAHAVGAGELSLELEDLSFQRLYPQAYAHIDQWLSSQEDDCKRVIAASKEELLRAL 279
Query: 291 KTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVII--KPSSNLVNT 348
D L V V V GRYKSR+STMKKL+KDGR PE+VND+LG+RVI+ +P
Sbjct: 280 TADDELRCTVTGVDVMGRYKSRFSTMKKLVKDGRRPEDVNDILGMRVILDPRPGGGGGGD 339
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSD---NGKTRPLM 405
+ G+RAC T E+I+++WK++P RTKDYI RPK NGYRSLH+AVD+S+ GK RPLM
Sbjct: 340 GDGGDRACLRTHEVIKAMWKDVPARTKDYITRPKGNGYRSLHVAVDMSEPGPEGKKRPLM 399
Query: 406 EIQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHK 465
EIQ+RT EMDM AV G ASHA YKGGLT+PEEAKRLKAIMLAAAE+AA L+D P+ +
Sbjct: 400 EIQVRTREMDMAAVGGQASHALYKGGLTDPEEAKRLKAIMLAAAEVAAQHLRDEPAGDGG 459
Query: 466 GFEFDWR-------DRVFRLLDKNGDGRISIEELMEVMEELGAPGEDAREMMQLLDSNSD 518
+R F+LLDKNGDGRIS+EEL E+ME+LGA G DA E+M+LLD+NSD
Sbjct: 460 QTTAAASAATAGNVERAFQLLDKNGDGRISMEELTEIMEDLGAGGHDAEELMRLLDANSD 519
Query: 519 GSLSSDEFDLFQKQVEFMRNLEDRDDEYRTMLDEKLQMAGDSGLIQVYSTELGNRL 574
GSLSSDEF LFQK+VE LE++DDEY+ +L +KLQ D+GLI VY L ++L
Sbjct: 520 GSLSSDEFALFQKRVELKTKLENKDDEYKEILKQKLQKVDDTGLIHVYRKNLSDKL 575
>gi|222630295|gb|EEE62427.1| hypothetical protein OsJ_17218 [Oryza sativa Japonica Group]
Length = 575
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 294/533 (55%), Positives = 386/533 (72%), Gaps = 12/533 (2%)
Query: 53 PSTAGEKMVVKLVGAFNELTERM--NVLSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPL 110
P+ +G +++ +L+G FN LTERM +V +SSSSRLLF+ALKL++P L+ +
Sbjct: 41 PAGSGGRLMAELLGVFNGLTERMGEDVATSSSSRLLFRALKLALPALRDGGCDGGGGQSV 100
Query: 111 TKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNN 170
++AL VA LADLQMDAEVISAG++R +++G +++ V ++G A L+ ESL+VK
Sbjct: 101 SRALVVAASLADLQMDAEVISAGMVRGALDTGALAMADVEAQLGASAAGLVEESLKVKRA 160
Query: 171 VNLKLQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMK 230
+ ++ V D+E A+ALRK CL+ YDIRA+IL+LA++LD M+HLD LP++QQ SLEV+K
Sbjct: 161 PS-EVDVADEEAASALRKRCLSSYDIRAVILELAVKLDAMKHLDVLPKHQQRTTSLEVLK 219
Query: 231 IHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCL 290
+ A LAHAV LS ELEDLSF+ L+P +Y +D WL S E K +I KE+LL+ L
Sbjct: 220 VFALLAHAVGAGELSLELEDLSFQRLYPQAYAHIDQWLSSQEDDCKRVIAASKEELLRAL 279
Query: 291 KTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVII--KPSSNLVNT 348
D L V V V GRYKSR+STMKKL+KDGR PE+VND+LG+RVI+ +P
Sbjct: 280 TADDELRCTVTGVDVMGRYKSRFSTMKKLVKDGRRPEDVNDILGMRVILDPRPGGGGCGD 339
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSD---NGKTRPLM 405
+ G+RAC T E+I+++WK++P RTKDYI RPK NGYRSLH+AVD+S+ GK RPLM
Sbjct: 340 GDGGDRACLRTHEVIKAMWKDVPARTKDYITRPKGNGYRSLHVAVDMSEPGPEGKKRPLM 399
Query: 406 EIQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNH- 464
EIQ+RT EMDM AV G ASHA YKGGLT+PEEAKRLKAIMLAAAE+AA L+D P+ +
Sbjct: 400 EIQVRTREMDMAAVGGQASHALYKGGLTDPEEAKRLKAIMLAAAEVAAQHLRDEPAGDGG 459
Query: 465 ---KGFEFDWRDRVFRLLDKNGDGRISIEELMEVMEELGAPGEDAREMMQLLDSNSDGSL 521
+R F+LLDKNGDGRIS+EEL E+ME+LGA G DA E+M+LLD+NSDGSL
Sbjct: 460 QTTAAATAGNVERAFQLLDKNGDGRISMEELTEIMEDLGAGGHDAEELMRLLDANSDGSL 519
Query: 522 SSDEFDLFQKQVEFMRNLEDRDDEYRTMLDEKLQMAGDSGLIQVYSTELGNRL 574
SSDEF LFQK+V+ LE++DDEY+ +L +KLQ D+GLI VY L ++L
Sbjct: 520 SSDEFALFQKRVKLKTKLENKDDEYKEILKQKLQKVDDTGLIHVYRKNLSDKL 572
>gi|297723731|ref|NP_001174229.1| Os05g0161800 [Oryza sativa Japonica Group]
gi|46981332|gb|AAT07650.1| unknown protein [Oryza sativa Japonica Group]
gi|255676049|dbj|BAH92957.1| Os05g0161800 [Oryza sativa Japonica Group]
Length = 578
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 294/536 (54%), Positives = 386/536 (72%), Gaps = 15/536 (2%)
Query: 53 PSTAGEKMVVKLVGAFNELTERM--NVLSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPL 110
P+ +G +++ +L+G FN LTERM +V +SSSSRLLF+ALKL++P L+ +
Sbjct: 41 PAGSGGRLMAELLGVFNGLTERMGEDVATSSSSRLLFRALKLALPALRDGGGDGGGGQSV 100
Query: 111 TKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNN 170
++AL VA LADLQMDAEVISAG++R +++G +++ V ++G A L+ ESL+VK
Sbjct: 101 SRALVVAASLADLQMDAEVISAGMVRGALDTGALAMADVEAQLGASAAGLVEESLKVKRA 160
Query: 171 VNLKLQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMK 230
+ ++ V D+E A+ALRK CL+ YDIRA+IL+LA++LD M+HLD LP++QQ SLEV+K
Sbjct: 161 PS-EVDVADEEAASALRKRCLSSYDIRAVILELAVKLDAMKHLDVLPKHQQRTTSLEVLK 219
Query: 231 IHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCL 290
+ A LAHAV LS ELEDLSF+ L+P +Y +D WL S E K +I KE+LL+ L
Sbjct: 220 VFALLAHAVGAGELSLELEDLSFQRLYPQAYAHIDQWLSSQEDDCKRVIAASKEELLRAL 279
Query: 291 KTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVII--KPSSNLVNT 348
D L V V V GRYKSR+STMKKL+KDGR PE+VND+LG+RVI+ +P
Sbjct: 280 TADDELRCTVTGVDVMGRYKSRFSTMKKLVKDGRRPEDVNDILGMRVILDPRPGGGGGGD 339
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSD---NGKTRPLM 405
+ G+RAC T E+I+++WK++P RTKDYI RPK NGYRSLH+AVD+S+ GK RPLM
Sbjct: 340 GDGGDRACLRTHEVIKAMWKDVPARTKDYITRPKGNGYRSLHVAVDMSEPGPEGKKRPLM 399
Query: 406 EIQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHK 465
EIQ+RT EMDM AV G ASHA YKGGLT+PEEAKRLKAIMLAAAE+AA L+D P+ +
Sbjct: 400 EIQVRTREMDMAAVGGQASHALYKGGLTDPEEAKRLKAIMLAAAEVAAQHLRDEPAGDGG 459
Query: 466 GFEFDWR-------DRVFRLLDKNGDGRISIEELMEVMEELGAPGEDAREMMQLLDSNSD 518
+R F+LLDKNGDGRIS+EEL E+ME+LGA G DA E+M+LLD+NSD
Sbjct: 460 QTTAAASAATAGNVERAFQLLDKNGDGRISMEELTEIMEDLGAGGHDAEELMRLLDANSD 519
Query: 519 GSLSSDEFDLFQKQVEFMRNLEDRDDEYRTMLDEKLQMAGDSGLIQVYSTELGNRL 574
GSLSSDEF LFQK+V+ LE++DDEY+ +L +KLQ D+GLI VY L ++L
Sbjct: 520 GSLSSDEFALFQKRVKLKTKLENKDDEYKEILKQKLQKVDDTGLIHVYRKNLSDKL 575
>gi|156720245|dbj|BAF76773.1| calcium activating hyperphosphorylated guanine synthetase [Oryza
sativa Japonica Group]
Length = 577
Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust.
Identities = 294/535 (54%), Positives = 385/535 (71%), Gaps = 14/535 (2%)
Query: 53 PSTAGEKMVVKLVGAFNELTERM--NVLSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPL 110
P+ +G +++ +L+G FN LTERM +V +SSSSRLLF+ALKL++P L+ +
Sbjct: 41 PAGSGGRLMAELLGVFNGLTERMGEDVATSSSSRLLFRALKLALPALRDGGGDGGGGQSV 100
Query: 111 TKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNN 170
++AL VA LADLQMDAEVISAG++R +++G +++ V ++G A L+ ESL+VK
Sbjct: 101 SRALVVAASLADLQMDAEVISAGMVRGALDTGALAMADVEAQLGASAAGLVEESLKVKRA 160
Query: 171 VNLKLQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMK 230
+ ++ V D+E A+ALRK CL+ YDIRA+IL+LA++LD M+HLD LP++QQ SLEV+K
Sbjct: 161 PS-EVDVADEEAASALRKRCLSSYDIRAVILELAVKLDAMKHLDVLPKHQQRTTSLEVLK 219
Query: 231 IHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCL 290
+ A LAHAV LS ELEDLSF+ L+P +Y +D WL S E K +I KE+LL+ L
Sbjct: 220 VFALLAHAVGAGELSLELEDLSFQRLYPQAYAHIDQWLSSQEDDCKRVIAASKEELLRAL 279
Query: 291 KTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPS-SNLVNTS 349
D L V V V GRYKSR+STMKKL+KDGR PE+VND+LG+RVI+ P
Sbjct: 280 TADDELRCTVTGVDVMGRYKSRFSTMKKLVKDGRRPEDVNDILGMRVILDPRPGGGGGDG 339
Query: 350 EVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSD---NGKTRPLME 406
+ G+RAC T E+I+++WK++P RTKDYI RPK NGYRSLH+AVD+S+ GK RPLME
Sbjct: 340 DGGDRACLRTHEVIKAMWKDVPARTKDYITRPKGNGYRSLHVAVDMSEPGPEGKKRPLME 399
Query: 407 IQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKG 466
IQ+RT EMDM AV G ASHA YKGGLT+PEEAKRLKAIMLAAAE+AA L+D P+ +
Sbjct: 400 IQVRTREMDMAAVGGQASHALYKGGLTDPEEAKRLKAIMLAAAEVAAQHLRDEPAGDGGQ 459
Query: 467 FEFDWR-------DRVFRLLDKNGDGRISIEELMEVMEELGAPGEDAREMMQLLDSNSDG 519
+R F+LLDKNGDGRIS+EEL E+ME+LGA G DA E+M+LLD+NSDG
Sbjct: 460 TTAAASAATAGNVERAFQLLDKNGDGRISMEELTEIMEDLGAGGHDAEELMRLLDANSDG 519
Query: 520 SLSSDEFDLFQKQVEFMRNLEDRDDEYRTMLDEKLQMAGDSGLIQVYSTELGNRL 574
SLSSDEF LFQK+V+ LE++DDEY+ +L +KLQ D+GLI VY L ++L
Sbjct: 520 SLSSDEFALFQKRVKLKTKLENKDDEYKEILKQKLQKVDDTGLIHVYRKNLSDKL 574
>gi|125550943|gb|EAY96652.1| hypothetical protein OsI_18566 [Oryza sativa Indica Group]
Length = 559
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 294/545 (53%), Positives = 383/545 (70%), Gaps = 28/545 (5%)
Query: 48 SPAP--LPSTAGEKMVVKLVGAFNELTERM--NVLSSSSSRLLFKALKLSIPMLQSLPLS 103
+PAP P+ +G +++ +L+G FN LTERM +V +SSS LLF+ALKL++P L+ +
Sbjct: 26 APAPRLTPAGSGGRLMAELLGVFNGLTERMGDDVATSSSWTLLFRALKLALPALRD---A 82
Query: 104 PDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHE 163
RS L +AL VA LADLQMDAEVISAG++RQ +++G V++ ++G G A LL E
Sbjct: 83 AGGRS-LARALIVAASLADLQMDAEVISAGIVRQAMDAGAVAMADAEAQLGPGAAALLRE 141
Query: 164 SLRVKNNVNLKLQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLM 223
SL VKN + ++ V D+E A+A+R L+ YD+RA+IL+LAIRLD M+HLD +P++QQ
Sbjct: 142 SLDVKNAPS-RVDVADEEAASAVRNRILSGYDVRAVILELAIRLDAMKHLDGVPKHQQRT 200
Query: 224 ISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYK 283
SLEV+K+ APLAHAV LS ELEDLSF L+P +Y VD WL E K ++ K
Sbjct: 201 TSLEVLKVFAPLAHAVGAGALSKELEDLSFWRLYPQAYAQVDQWLSGQEDDCKRVLATCK 260
Query: 284 EQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSS 343
+ LLQ L D L V V+GRYKSR+S MKKL+KDGR PE+V+D+LG+RVI+
Sbjct: 261 DDLLQALAADDELRHTVAGFDVKGRYKSRFSAMKKLVKDGRRPEDVHDILGMRVIL---D 317
Query: 344 NLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSD---NGK 400
+L + G RAC T E+I+ +WK++P RTKDYIARPK +GYRSLH+AVD+S+ GK
Sbjct: 318 HLAGAGD-GHRACIRTHEVIKGMWKDVPARTKDYIARPKGDGYRSLHIAVDMSEPGPEGK 376
Query: 401 TRPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIP 460
RPLME+QIRT+EM+ AV G HA YKG L +PEEAKRLK IMLAAAE+AA L+D P
Sbjct: 377 KRPLMEVQIRTKEMNDAAVFG---HALYKGCLADPEEAKRLKDIMLAAAEVAAQHLRDEP 433
Query: 461 ST-NHKGFEFDWR--------DRVFRLLDKNGDGRISIEELMEVMEELGAPGEDAREMMQ 511
+T + G +R FRLLDKNGDGRIS+EEL E+ME+LGA G+DA E+M+
Sbjct: 434 ATGDQTGVPAAAAAAASAGNIERAFRLLDKNGDGRISMEELTELMEDLGAGGKDAEELMR 493
Query: 512 LLDSNSDGSLSSDEFDLFQKQVEFMRNLEDRDDEYRTMLDEKLQMAGDSGLIQVYSTELG 571
LLD N+DGSLSSDEF LFQK+VE LED+DDEY+ +L +KLQ D+GLI VY L
Sbjct: 494 LLDDNNDGSLSSDEFALFQKRVELKAKLEDKDDEYKEILKQKLQKVDDTGLIHVYRKNLS 553
Query: 572 NRLAS 576
++L S
Sbjct: 554 DKLVS 558
>gi|115462253|ref|NP_001054726.1| Os05g0161500 [Oryza sativa Japonica Group]
gi|51038119|gb|AAT93922.1| unknown protein [Oryza sativa Japonica Group]
gi|113578277|dbj|BAF16640.1| Os05g0161500 [Oryza sativa Japonica Group]
gi|215764995|dbj|BAG86692.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 559
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 293/545 (53%), Positives = 382/545 (70%), Gaps = 28/545 (5%)
Query: 48 SPAP--LPSTAGEKMVVKLVGAFNELTERM--NVLSSSSSRLLFKALKLSIPMLQSLPLS 103
+PAP P+ +G +++ +L+G FN LTERM +V +SSS LLF+ALKL++P L+ +
Sbjct: 26 APAPRLTPAGSGGRLMAELLGVFNGLTERMGDDVATSSSWTLLFRALKLALPALRD---A 82
Query: 104 PDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHE 163
RS L +AL VA LADLQMDAEVISAG++RQ +++G V++ ++G G A LL E
Sbjct: 83 AGGRS-LARALIVAASLADLQMDAEVISAGIVRQAMDAGAVAMADAEAQLGPGAAALLLE 141
Query: 164 SLRVKNNVNLKLQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLM 223
SL VKN + ++ V D+E A+A+R L+ YD+RA+IL+LAIRLD M+HLD +P++QQ
Sbjct: 142 SLDVKNAPS-RVDVADEEAASAVRNRILSGYDVRAVILELAIRLDAMKHLDGVPKHQQRT 200
Query: 224 ISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYK 283
SLEV+K+ APLAHAV LS ELEDLSF L+P +Y VD WL E K ++ K
Sbjct: 201 TSLEVLKVFAPLAHAVGAGALSKELEDLSFWRLYPQAYAQVDQWLSGQEDDCKRVLATCK 260
Query: 284 EQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSS 343
+ LLQ L D L V V+GRYKSR+S MKKL+KDGR PE+V+D+LG+RVI+ +
Sbjct: 261 DDLLQALAADDELRHTVAGFDVKGRYKSRFSAMKKLVKDGRRPEDVHDILGMRVILDHRA 320
Query: 344 NLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSD---NGK 400
+ G RAC T E+I+ +WK++P RTKDYIARPK +GYRSLH+AVD+S+ GK
Sbjct: 321 GAGD----GHRACIRTHEVIKGMWKDVPARTKDYIARPKGDGYRSLHIAVDMSEPGPEGK 376
Query: 401 TRPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIP 460
RPLME+QIRT+EM+ AV G HA YKG L +PEEAKRLK IMLAAAE+AA L+D P
Sbjct: 377 KRPLMEVQIRTKEMNDAAVFG---HALYKGCLADPEEAKRLKDIMLAAAEVAAQHLRDEP 433
Query: 461 ST-NHKGFEFDWR--------DRVFRLLDKNGDGRISIEELMEVMEELGAPGEDAREMMQ 511
+T + G +R FRLLDKNGDGRIS+EEL E+ME+LGA G+DA E+M+
Sbjct: 434 ATGDQTGVPAAAAAAASAGNIERAFRLLDKNGDGRISMEELTELMEDLGAGGKDAEELMR 493
Query: 512 LLDSNSDGSLSSDEFDLFQKQVEFMRNLEDRDDEYRTMLDEKLQMAGDSGLIQVYSTELG 571
LLD N+DGSLSSDEF LFQK+VE LED+DDEY+ +L +KLQ D+GLI VY L
Sbjct: 494 LLDDNNDGSLSSDEFALFQKRVELKAKLEDKDDEYKEILRQKLQKVDDTGLIHVYRKNLS 553
Query: 572 NRLAS 576
++L S
Sbjct: 554 DKLVS 558
>gi|116789282|gb|ABK25186.1| unknown [Picea sitchensis]
Length = 534
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 265/494 (53%), Positives = 355/494 (71%), Gaps = 9/494 (1%)
Query: 16 NTFTNMRTRRIPAPRLNSHSIRAESSSSSFASSPAPLPSTAGEKMVVKLVGAFNELTERM 75
N F + R + + A++ S SS LP G KMVV+LV A+N+LT+RM
Sbjct: 48 NNFVKKQRSITCESRTKTEYVLAKNECGS--SSVIELP---GGKMVVELVAAWNDLTDRM 102
Query: 76 NVLSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLL 135
N +SS SS LL KALK++IP+LQSLP D R PL+KALSVA +LADLQ++AEVI LL
Sbjct: 103 NPISSKSSELLLKALKITIPLLQSLPCGEDGRPPLSKALSVACILADLQVEAEVIVVCLL 162
Query: 136 RQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRKFCLTYYD 195
R+++E+G +S ++ ++G G HLLH+ LRVK + ++ +LDD+ A ALRKFCL Y+D
Sbjct: 163 RELLEAGAISRHEINLQLGRGITHLLHDCLRVKK-IPTRVDILDDDNAYALRKFCLAYHD 221
Query: 196 IRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRY 255
IRA+I+++A RLDMMRH +LP+Y Q ++L+VM+++APLAHA+ T LS ELEDL+F+
Sbjct: 222 IRAVIVEVAARLDMMRHSKHLPKYCQQTLALDVMQVYAPLAHAIGTGSLSLELEDLAFQS 281
Query: 256 LFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYST 315
LFP SY FVDTWLR+H T + +++ Y+ QL + L+ D L +V+ +S+QGRYKS +ST
Sbjct: 282 LFPNSYSFVDTWLRNHGTWGEAILNEYRCQLFEALQKDYELEKMVDKISIQGRYKSHFST 341
Query: 316 MKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTK 375
MKKLLKDGR PEEV D+LGLRV++ P + E+G + CY RE+IQSLWKE+P R K
Sbjct: 342 MKKLLKDGRKPEEVYDILGLRVVLNPRPG-KDAQEIGRKVCYRAREVIQSLWKEVPQRMK 400
Query: 376 DYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNP 435
DY+A+PK NGY SLH+ +D++D+ P MEIQIRT EMD AV G ASH YKGGLT+P
Sbjct: 401 DYVAKPKKNGYESLHLTIDLNDSNFESPSMEIQIRTAEMDAKAVGGDASHGLYKGGLTDP 460
Query: 436 EEAKRLKAIMLAAAELAALRLKDIPSTNHKG--FEFDWRDRVFRLLDKNGDGRISIEELM 493
E+ K+LKAIM+AAA+LAA + +P + KG D + R+F+L DKN DG IS+EEL
Sbjct: 461 EQVKQLKAIMMAAADLAAFHFQGLPKRSSKGSTMHNDMKSRIFKLFDKNQDGLISMEELK 520
Query: 494 EVMEELGAPGEDAR 507
E+MEELGA EDA+
Sbjct: 521 EMMEELGANKEDAQ 534
>gi|168043135|ref|XP_001774041.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674587|gb|EDQ61093.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 494
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 243/489 (49%), Positives = 338/489 (69%), Gaps = 17/489 (3%)
Query: 57 GEKMVVKLVGAFNELTERM--NVLSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTKAL 114
G + V +LVGA++ L R+ + SS+ S LL AL+L++ L+ + D R PL++AL
Sbjct: 1 GGQQVAELVGAWDGLAGRLPPDFASSAGSTLLLAALRLTVSTLRHTSPTEDGRKPLSRAL 60
Query: 115 SVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLK 174
SVA +LADL+MDAEVI+AGLLR+VVE+G ++I V +G A LL + RVK +L
Sbjct: 61 SVAFILADLRMDAEVIAAGLLREVVEAGYLNIAGVERVLGKEVAILLEDCARVKYMPSL- 119
Query: 175 LQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAP 234
L LDD + A+R++CL ++D+RA+++++A RLD +RH+ LPRY+Q M+SLE M+I+AP
Sbjct: 120 LDTLDDASVKAIRQYCLAFHDVRAIVVEVAARLDTLRHIQVLPRYRQQMLSLETMQIYAP 179
Query: 235 LAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDA 294
LAHA+ T +S ELEDL FR LFP SY ++ +WL+ H + ++ + L + L+ D
Sbjct: 180 LAHAMGTGKVSHELEDLGFRVLFPDSYTYIGSWLKLHFADGQKVVQQCQNDLQKALEEDP 239
Query: 295 TLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEV--- 351
+ L+E V + GR KS+YSTMKKLL+DGR PEEV DVLGLRV++ P TS V
Sbjct: 240 EMQSLIESVKISGRCKSKYSTMKKLLRDGRPPEEVFDVLGLRVVLTPRKE--GTSSVKKR 297
Query: 352 GERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRT 411
G RACY EI +LW+E+P R KDYIA+PK NGY SLH+AV +S+ G LME+QIRT
Sbjct: 298 GARACYKALEIATTLWEEVPGRLKDYIAKPKKNGYESLHLAVTLSNRGNWSTLMEVQIRT 357
Query: 412 EEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTN----HKGF 467
EEM+ +A G ASH+ YKGGLT+PE+A LKAIM AAA++A+ R D+ + + +GF
Sbjct: 358 EEMNEMAEGGLASHSLYKGGLTDPEQAGYLKAIMQAAADVASTRFSDLTNESVEVIGEGF 417
Query: 468 ---EFDWRDRVFRLLDKNGDGRISIEELMEVMEELGAPGEDAREMMQLLDSNSDGSLSSD 524
+FD D++F DKN DG IS++EL +V+ ELG EDA E+M+L+DSN DGS+S +
Sbjct: 418 AQSKFD--DQMFTFFDKNNDGVISMDELKDVIGELGGDEEDANELMKLVDSNFDGSVSQE 475
Query: 525 EFDLFQKQV 533
EF F++QV
Sbjct: 476 EFKDFRRQV 484
>gi|222630294|gb|EEE62426.1| hypothetical protein OsJ_17217 [Oryza sativa Japonica Group]
Length = 481
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 246/480 (51%), Positives = 320/480 (66%), Gaps = 45/480 (9%)
Query: 48 SPAP--LPSTAGEKMVVKLVGAFNELTERM--NVLSSSSSRLLFKALKLSIPMLQSLPLS 103
+PAP P+ +G +++ +L+G FN LTERM +V +SSS LLF+ALKL++P L+ +
Sbjct: 26 APAPRLTPAGSGGRLMAELLGVFNGLTERMGDDVATSSSWTLLFRALKLALPALRD---A 82
Query: 104 PDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHE 163
RS L +AL VA LADLQMDAEVISAG++RQ +++G V++ ++G G A LL E
Sbjct: 83 AGGRS-LARALIVAASLADLQMDAEVISAGIVRQAMDAGAVAMADAEAQLGPGAAALLLE 141
Query: 164 SLRVKNNVNLKLQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLM 223
SL VKN + ++ V D+E A AL AIRLD M+HLD +P++QQ
Sbjct: 142 SLDVKNAPS-RVDVADEEAARAL-----------------AIRLDAMKHLDGVPKHQQRT 183
Query: 224 ISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYK 283
SLEV+K+ APLAHAV LS ELEDLSF L+P +Y VD WL E K ++ K
Sbjct: 184 TSLEVLKVFAPLAHAVGAGALSKELEDLSFWRLYPQAYAQVDQWLSGQEDDCKRVLATCK 243
Query: 284 EQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSS 343
+ LLQ L D L V V+GRYKSR+S MKKL+KDGR PE+V+D+LG+RVI+ +
Sbjct: 244 DDLLQALAADDELRHTVAGFDVKGRYKSRFSAMKKLVKDGRRPEDVHDILGMRVILDHRA 303
Query: 344 NLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSD---NGK 400
+ G RAC T E+I+ +WK++P RTKDYIARPK +GYRSLH+AVD+S+ GK
Sbjct: 304 GAGD----GHRACIRTHEVIKGMWKDVPARTKDYIARPKGDGYRSLHIAVDMSEPGPEGK 359
Query: 401 TRPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIP 460
RPLME+QIRT+EM+ AV G HA YKG L +PEEAKRLK IMLAAAE+AA L+D P
Sbjct: 360 KRPLMEVQIRTKEMNDAAVFG---HALYKGCLADPEEAKRLKDIMLAAAEVAAQHLRDEP 416
Query: 461 ST-NHKGFEFDWR--------DRVFRLLDKNGDGRISIEELMEVMEELGAPGEDAREMMQ 511
+T + G +R FRLLDKNGDGRIS+EEL E+ME+LGA G+DA E+M+
Sbjct: 417 ATGDQTGVPAAAAAAASAGNIERAFRLLDKNGDGRISMEELTELMEDLGAGGKDAEELMR 476
>gi|302763085|ref|XP_002964964.1| hypothetical protein SELMODRAFT_83164 [Selaginella moellendorffii]
gi|300167197|gb|EFJ33802.1| hypothetical protein SELMODRAFT_83164 [Selaginella moellendorffii]
Length = 595
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 237/514 (46%), Positives = 330/514 (64%), Gaps = 23/514 (4%)
Query: 28 APRLNSHSIRAESSSSS------FASSPAPLPSTAGEKMVVKLVGAFNELTERMN--VLS 79
A R S S E++ S F+ A LP V +L+ A++ L+ER++ +L
Sbjct: 94 ASRWCSSSDHKETTERSRVKEEEFSIDAAKLPQ------VFQLLSAWDTLSERLSPEILQ 147
Query: 80 SSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVV 139
+ S+LL LK+++P LQ P S D R L++AL++A LADL MDAEVI++G+LR +
Sbjct: 148 CNGSQLLLSTLKVALPALQLAPYSKDGRFQLSRALAIAYTLADLHMDAEVIASGILRVAM 207
Query: 140 ESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRKFCLTYYDIRAL 199
E+ +S+ V+ +G G HLL +SLRV N + L LDDE A LR F L Y+DIRA+
Sbjct: 208 ETEVLSLTDVQRELGAGAFHLLDDSLRV-NQLACCLDNLDDENANMLRDFSLAYHDIRAM 266
Query: 200 ILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPF 259
+++LA RLD MRH+D LPR +Q M +LE M+++APLAHA+ LS ELED++FR LFP
Sbjct: 267 VVELASRLDEMRHVDCLPRLRQQMAALENMQLYAPLAHALGLGTLSQELEDMAFRILFPD 326
Query: 260 SYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKL 319
SY V+ WL+SH + +I +QL L+ D+ L +VE V V GR KSR+STMKKL
Sbjct: 327 SYQCVEDWLQSHWGDGEAIIAESIKQLKAALEADSVLQGMVESVKVTGRRKSRFSTMKKL 386
Query: 320 LKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIA 379
L+DGR P++V D+LGLRVI+ P + E G ACY ++I+ ++WKE+P R KDYIA
Sbjct: 387 LRDGRGPDQVYDILGLRVILFPKTG--AGEEAGIAACYRAQKIVTNMWKEVPGRMKDYIA 444
Query: 380 RPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAK 439
+PK NGY SLH+AV ++ G ME+QIRT M AV G +SHA YKGGLT+P + +
Sbjct: 445 KPKLNGYSSLHLAVFLTKYGPWSLPMELQIRTSAMHAHAVAGGSSHALYKGGLTDPRQVE 504
Query: 440 RLKAIMLAAAELAALRLKDIPSTNHKGFEFDWRDRVFRLLDKNGDGRISIEELMEVMEEL 499
KA+MLAAA+ AA R + + D VFR+ DKN DG IS EE +V+ +L
Sbjct: 505 NFKAVMLAAAKTAACRFQSDTVSEPNA------DHVFRMFDKNSDGIISKEEFHDVLLQL 558
Query: 500 GAPGEDAREMMQLLDSNSDGSLSSDEFDLFQKQV 533
GA D E+++LLD+N+DGS+ ++EF ++QV
Sbjct: 559 GADKGDTSELLRLLDTNTDGSVDTNEFAELKRQV 592
>gi|302790548|ref|XP_002977041.1| hypothetical protein SELMODRAFT_21858 [Selaginella moellendorffii]
gi|300155017|gb|EFJ21650.1| hypothetical protein SELMODRAFT_21858 [Selaginella moellendorffii]
Length = 467
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/475 (47%), Positives = 316/475 (66%), Gaps = 11/475 (2%)
Query: 61 VVKLVGAFNELTERMN--VLSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTKALSVAL 118
V +L+ A++ L+ER++ +L + S+LL LK+++P Q P S D R L++AL++A
Sbjct: 2 VFQLLSAWDTLSERLSPEILQCNGSQLLLSTLKVALPAFQLAPYSKDGRFQLSRALAIAY 61
Query: 119 LLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVL 178
LADL MDAEVI++G+LR +E+ +S+ V+ +G G HLL +SLRV N + L L
Sbjct: 62 TLADLHMDAEVIASGILRVAMETEVLSLTDVQRELGAGAFHLLDDSLRV-NQLACCLDNL 120
Query: 179 DDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHA 238
DDE A LR F L Y+DIRA++++LA RL+ MRH+D LPR +Q M +LE M+++APLAHA
Sbjct: 121 DDENANMLRDFSLAYHDIRAMVVELASRLNEMRHVDCLPRLRQQMAALENMQLYAPLAHA 180
Query: 239 VATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLAD 298
+ LS ELED++FR LFP SY V+ WL+SH + +I +QL L+ D+ L
Sbjct: 181 LGLGTLSQELEDMAFRILFPDSYQCVEDWLQSHWGDGEAIIAESIKQLKAALEADSVLQG 240
Query: 299 LVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYT 358
+VE V V GR KSR+STMKKLL+DGR P++V D+LGLRVI+ P + E G ACY
Sbjct: 241 MVESVKVTGRRKSRFSTMKKLLRDGRGPDQVYDILGLRVILFPKTG--AGEEAGIAACYR 298
Query: 359 TREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLA 418
++I+ ++WKE+P R KDYIA+PK NGY SLH+AV ++ G ME+QIRT M A
Sbjct: 299 AQKIVTNMWKEVPGRMKDYIAKPKLNGYSSLHLAVFLTKYGPWSLPMELQIRTSAMHAHA 358
Query: 419 VNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFEFDWRDRVFRL 478
V G +SHA YKGGLT+P + + KA+MLAAA+ AA R + + D VFR+
Sbjct: 359 VAGGSSHALYKGGLTDPRQVENFKAVMLAAAKTAACRFQSDTVSEPNA------DHVFRM 412
Query: 479 LDKNGDGRISIEELMEVMEELGAPGEDAREMMQLLDSNSDGSLSSDEFDLFQKQV 533
DKN DG IS EE +V+ +LGA D E+++LLD+N+DGS+ ++EF ++QV
Sbjct: 413 FDKNSDGIISKEEFHDVLLQLGADKGDTSELLRLLDTNTDGSVDTNEFAELKRQV 467
>gi|168000953|ref|XP_001753180.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695879|gb|EDQ82221.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 549
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 238/506 (47%), Positives = 327/506 (64%), Gaps = 15/506 (2%)
Query: 36 IRAESSSSSFASSPAPLPSTAGEKMVVKLVGAFNELTERM--NVLSSSSSRLLFKALKLS 93
+ AES SS L +T G + V +L+GA+N L R+ +S+ S LL ALKL+
Sbjct: 40 VEAESKSSKL------LFNTPGSQRVAELMGAWNGLAGRLPPEFATSNGSTLLLAALKLT 93
Query: 94 IPMLQSLPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRI 153
+ L+ + D R L +ALSVA +LADL+MDAEVI+AGLLR+V E+G + +V +
Sbjct: 94 VSSLRHGSSTEDGREVLNRALSVAFILADLRMDAEVIAAGLLREVFEAGYLDTARVETVL 153
Query: 154 GIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHL 213
A LL + RVK+ +L L LD+ + A R+FCL ++D+RA+++++A RL +MRH
Sbjct: 154 CNEVAILLKDCGRVKHMPSL-LDTLDEASVQATRQFCLAFHDVRAVVVEVAARLVIMRHS 212
Query: 214 DYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHET 273
LPRY+Q M++LE M+I+AP+AHA+ LS ELEDL FR LFP SY ++ WL +
Sbjct: 213 QSLPRYKQQMLALETMQIYAPVAHAMGIGKLSHELEDLGFRVLFPDSYTYIGGWLEQYFA 272
Query: 274 GSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVL 333
++ KE L L+ D+ + LVE + + GR KS+YSTMKKLL+DGR PEEV DVL
Sbjct: 273 DGHEVVQQCKEDLQSALEEDSEMQSLVEGIEISGRCKSKYSTMKKLLRDGRPPEEVFDVL 332
Query: 334 GLRVIIKP-SSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMA 392
GLRV++ P S E G RACY EI +LWKE+P R KDYI PK NGY SLH A
Sbjct: 333 GLRVVLTPRKSGTSPVKERGARACYRALEIATTLWKEVPGRLKDYITEPKKNGYESLHSA 392
Query: 393 VDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELA 452
V +S G PLMEIQIRT EMD +A G ASH+ YKGGLT+P++A LKAIM AAA++A
Sbjct: 393 VSLSTRGNWSPLMEIQIRTAEMDEMAEGGLASHSLYKGGLTDPDQAGILKAIMQAAADVA 452
Query: 453 ALRLKDIPS-----TNHKGFEFDWRDRVFRLLDKNGDGRISIEELMEVMEELGAPGEDAR 507
+ R D+ + + + D++F L D+N DG IS++E +V+ ELG EDA
Sbjct: 453 STRFPDLTNELVEVAGEEDAQKKLDDQMFTLFDRNTDGVISMDEFKDVISELGGDEEDAN 512
Query: 508 EMMQLLDSNSDGSLSSDEFDLFQKQV 533
E+M L+DSN +GS++++EF F++QV
Sbjct: 513 ELMNLVDSNFNGSVNAEEFKNFRRQV 538
>gi|145344131|ref|XP_001416591.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576817|gb|ABO94884.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 505
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 190/508 (37%), Positives = 285/508 (56%), Gaps = 34/508 (6%)
Query: 47 SSPAPLPSTAGEKMVVKLVGAFNELTERMNVL--SSSSSRLLFKALKLSIPMLQSLPLSP 104
+S AP G VV V A++ ++ R+ + +L AL L+IP LQ + +
Sbjct: 8 ASGAPF----GGSRVVDFVAAWDAISPRLAAREHGEADKEMLLSALTLAIPRLQQIVRTE 63
Query: 105 D-SRSPL-TKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLH 162
+ P +A+ V L L D+ MDAE ISAGLLR+ V G VS+ ++ D +G L H
Sbjct: 64 GKGKKPAHERAVDVTLTLVDMGMDAECISAGLLREAVVHGTVSLDEIEDVLGERVMRLAH 123
Query: 163 ESLRVKNNVNLKLQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQL 222
+ RV +++ ++ D+ A LR F L+++DIRA++++LA RLD +R++D L Q+
Sbjct: 124 DVGRV-HDLPRRVHSYDENAAERLRSFYLSFHDIRAIVVELACRLDTLRNIDELEPIQRT 182
Query: 223 MISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIY 282
I+LE M+I+AP+AHA+ T L ELEDL+F+ LFP SY ++ WL + G ++D
Sbjct: 183 TIALETMQIYAPMAHALNTGALCAELEDLAFKILFPTSYASLERWLTAKSPGDSAILDKM 242
Query: 283 KEQLLQCLKTDATLADLV--EDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIK 340
+ L + D T+ L+ V V R KSRYSTMKK+++DGR EEV+D+LGLR+++
Sbjct: 243 TKMLTDTMNADTTMNALIGRGGVKVLARRKSRYSTMKKIIRDGRKREEVHDLLGLRLVLT 302
Query: 341 PSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGK 400
P + + ACY ++I+ L+ + RTKDYI+ PKANGY SLH + V+
Sbjct: 303 PQPGTLKAANA---ACYRAQQIVHGLFPAVSGRTKDYISDPKANGYSSLHSTLKVAFGDD 359
Query: 401 TRPL-----------MEIQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAA 449
+PL +E+QIRT M + A GTASH YKGGL A + +AA
Sbjct: 360 GKPLASSEAYKRGVNVEMQIRTAAMHLAAEAGTASHNSYKGGLKEDTGMAGSLADLASAA 419
Query: 450 ELAALRLKDIPSTNHKGFEF--DWRDRVFRLLDKNGDGRISIEELMEVME-----ELGAP 502
AA + + H + DR+F D +GDGR+++ EL V+E E+
Sbjct: 420 NRAA--EEKFGAFTHADLRERDELHDRLFEAFDLDGDGRVTMSELRTVLEKIWDTEMNDL 477
Query: 503 GEDAREMMQLLDSNSDGSLSSDEFDLFQ 530
E+A +M+LLD N DG++ +DEF F+
Sbjct: 478 REEAHALMELLDVNQDGTIDADEFAKFR 505
>gi|255075311|ref|XP_002501330.1| hypothetical protein MICPUN_57757 [Micromonas sp. RCC299]
gi|226516594|gb|ACO62588.1| hypothetical protein MICPUN_57757 [Micromonas sp. RCC299]
Length = 1496
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 196/608 (32%), Positives = 302/608 (49%), Gaps = 97/608 (15%)
Query: 24 RRIPAPRLNSHSIRAESSSSSFASSPAPLPSTAGEKMVVKLVGAFNELTERMNVLSSSSS 83
R P R + S SS+ +S S A VV+ V A++ L+ R+ ++S +
Sbjct: 108 RGSPGARGRKNGAGGSSPSSALVASN----SLASSSRVVEFVAAWDALSPRLAAAAASGT 163
Query: 84 --------------------RLLFKALKLSIPMLQSLP---LSPDSRSPLTKALSVALLL 120
+L ALKL+IP LQ +P +P R +A+ V L L
Sbjct: 164 SFSARTPLGETVPVSAAGNREMLLSALKLAIPRLQMIPDQQTNPGERPVHERAVEVTLAL 223
Query: 121 ADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDD 180
D+ MDAE +SAGLLR+ + +G VS+ ++ +G G L H+ R+ + + ++ DD
Sbjct: 224 VDIGMDAECMSAGLLREALVAGTVSLDEIESHLGAGVMRLAHDCARL-HALPRRVGSYDD 282
Query: 181 ETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVA 240
A LR FCLT++D+RA++++LA R D +R + LP ++ ++LE M+++AP+AHA+
Sbjct: 283 GAAEKLRTFCLTFHDVRAVVVELAYRADQLRRAESLPPVRRTALALETMQLYAPMAHALD 342
Query: 241 TNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLV 300
L ELEDLS ++LFP SY ++ WLR + +D +E L + L D L LV
Sbjct: 343 AGPLCAELEDLSLQWLFPSSYKSLEQWLRGEGPADRSALDRAREWLTEALCADPGLMTLV 402
Query: 301 ---EDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGE---- 353
V+V+ R KS +STM+K+L+DGR E+V+D+LG+RVII P + S GE
Sbjct: 403 GGPAGVAVKARRKSLFSTMRKVLRDGRAREDVHDLLGMRVIITPQPGAPSHSRAGETNED 462
Query: 354 ----------RACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDN----- 398
ACY ++I ++ + RTKDY+ RPK+NGYRSLH + + ++
Sbjct: 463 DVAAAERSAMAACYRAQQIAHGVFDVVAGRTKDYLQRPKSNGYRSLHSTLTLPEDWTNAD 522
Query: 399 ------------------------------------GKTRPLMEIQIRTEEMDMLAVNGT 422
GK +E+Q+RT M A G+
Sbjct: 523 GTVNNAGGGSKVEDEPGMDANGKIKERSKEKSGKEGGKEGRRVELQVRTAAMHAAAEMGS 582
Query: 423 ASHAFYKGGLT-NPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFEFDWRDRVFRLLDK 481
A+H YKGG +P A L ++ AA A R DR+F++ D
Sbjct: 583 AAHTAYKGGFKEDPGAADALAELVNAANAAAEERFGSFTEAGLADAAGSDADRMFQMFDL 642
Query: 482 NGDGRISIEELMEVMEEL--GAPGE--------DAREMMQLLDSNSDGSLSSDEFDLFQK 531
NGDG ++ EEL V+ +L G G+ A E+++LLD + DG++S +EF F+
Sbjct: 643 NGDGAVTREELRSVIGDLWQGTAGDGEESELRHSADELIELLDVDEDGTVSREEFAKFRT 702
Query: 532 QVEFMRNL 539
V + +L
Sbjct: 703 SVAVLGSL 710
>gi|302838755|ref|XP_002950935.1| hypothetical protein VOLCADRAFT_60953 [Volvox carteri f.
nagariensis]
gi|300263630|gb|EFJ47829.1| hypothetical protein VOLCADRAFT_60953 [Volvox carteri f.
nagariensis]
Length = 479
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 164/462 (35%), Positives = 263/462 (56%), Gaps = 26/462 (5%)
Query: 89 ALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADL-----QMDAEVISAGLLRQVVESGG 143
ALKL++ LQ PL D RSP T+A+ +A LADL +DA + AG++ + + G
Sbjct: 3 ALKLALASLQHAPLRRDGRSPATRAVQLASTLADLCAAGLPLDAAAMCAGVVSEAADLGA 62
Query: 144 VSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRKFCLTYYDIRALILDL 203
+ +R ++G A L+H+ LRV+ ++++LDDE A+A+R++CL ++D+R+ ++++
Sbjct: 63 LRADVIRAQLGPEVAALVHDMLRVRQAPR-RIELLDDEGASAVREWCLAFHDVRSCVVEV 121
Query: 204 AIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLF 263
D ++HL P ++Q I+LE ++I APL HA+ LS +ED+ + LFP SY
Sbjct: 122 VGWWDELQHLGGRPLFEQQAIALETLQIGAPLGHALGLGALSAVMEDMCLKVLFPESYTS 181
Query: 264 VDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLL--- 320
WLR ++ L+ +++LL L L + V+ R KS +S MKKLL
Sbjct: 182 TSAWLRGLLDPAEDLLFSAQQRLLSALDEHPDFGKLSGGLLVKARTKSLFSVMKKLLHLG 241
Query: 321 ---KDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGE--RACYTTREIIQSLWKEMPHRTK 375
+ GR EE+ D+LG+R I+KP L +ACY +++ LW+ +P R+K
Sbjct: 242 DMARGGRSREELYDLLGMRAIVKPPDFLPPAEAEAAATKACYIVQDVACKLWRPIPSRSK 301
Query: 376 DYIARPKANGYRSLHMA----VDVSDNGKTRPL-MEIQIRTEEMDMLAVNGTASHAFYKG 430
DYI PK NGY+S+H+ + ++ PL +E+QIRT MD+ A +G A+HA YKG
Sbjct: 302 DYIVSPKPNGYQSIHLTSAAAIAAAEAAAGGPLCVELQIRTAAMDIAAESGDAAHAVYKG 361
Query: 431 GLTNPEEAKRLKAIMLAAAELAAL--RLKDIPSTNHKGFE--FDWRDRVFRLLDKNGDGR 486
GL + A++L+A L ++D+P G + +++FR LD NGDGR
Sbjct: 362 GL-DARTARQLQAQRLLLFSSLGSLDEVEDVPLAIGLGQQDAAAAAEQLFRHLDVNGDGR 420
Query: 487 ISIEELMEVMEELGAPGE--DAREMMQLLDSNSDGSLSSDEF 526
+S++E+ + + +L AP DA ++ LD N DG +S +EF
Sbjct: 421 LSLDEVRQALTDLAAPSSERDAAALLAALDRNGDGGVSMEEF 462
>gi|307111439|gb|EFN59673.1| hypothetical protein CHLNCDRAFT_133184 [Chlorella variabilis]
Length = 1558
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 176/570 (30%), Positives = 283/570 (49%), Gaps = 84/570 (14%)
Query: 57 GEKMVVKLVGAFNELTERMNVLSSS--SSRLLFKALKLSIPMLQSLPLSPDSRS------ 108
G +++L+ A+++L+ R+ +S S+ L+ ALKL++ S SR
Sbjct: 120 GGASLLQLMAAWDQLSARLPPQASEGRSAELILTALKLALAYSPPAASSSSSRGQQAALS 179
Query: 109 -PLTKALSVALLLADLQ-----MDAEVISAGLLRQVVESGG------------------- 143
P+ +ALS+A LADL +DAE I+AG+L +V+ S
Sbjct: 180 RPVARALSLASRLADLAAAGLPIDAEGIAAGILAEVLGSAAHWQPHAVGGASTAAAAAAA 239
Query: 144 ----VSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRKFCLTYYDIRAL 199
+++Q V R+G A L+H+ R + + ++++LDD A+ALR+ CL++YD+RA
Sbjct: 240 GSGGLTLQVVEGRVGPIVAQLVHDIQRARQ-LPARVELLDDTAASALRELCLSFYDVRAT 298
Query: 200 ILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPF 259
+++ RLD + D LP YQQ + +LE ++++AP+ HA+ ++ +LED F+ LFP
Sbjct: 299 AVEVVARLDALAASDGLPSYQQQVCALEALQMYAPMGHALGLTAVAAQLEDRCFQILFPE 358
Query: 260 SYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKL 319
SYL WLR + ++ + L + +L + V GR KS +ST+KKL
Sbjct: 359 SYLRTAAWLREQAAANAEVLARCQAALEAAVAAQPRFGELAGGLVVAGRTKSLFSTLKKL 418
Query: 320 LK------DGRIPEEVNDVLGLRVIIKPSSN--LVNTSEVGERACYTTREIIQSLWKEMP 371
L+ GR ++ D++GLRV+++P ++ + +ACY R+ LW+ +
Sbjct: 419 LRLGNTAAGGRARAQLYDLMGLRVVVQPRADLPPEEAEALAAQACYLVRDAAFELWQPVA 478
Query: 372 HRTKDYIARPKANGYRSLHMAVDVSDNG-------------KTRPLMEIQIRTEEMDMLA 418
R KDYIA PK+NGY+SLH V V+ +E+QIRT+ M A
Sbjct: 479 GRCKDYIAAPKSNGYQSLHSTVRVASETVSLGGGGGGEGAISGHATLELQIRTQLMHDRA 538
Query: 419 VNGTASHAFYKGGLTNPEEAKRLKAIMLA--------------AAELAALRLKDIPSTNH 464
G A+HA YKGGL + +A +LK++ A A E+ A T
Sbjct: 539 ERGVAAHAAYKGGL-DATQALQLKSVTDAVLRRTAAAAAAASHAVEVEAGGGGGGGGTAV 597
Query: 465 KGFEFDWRDRVFRLLDKNGDGRISIEELMEVMEELGAPGEDAREMMQLL---------DS 515
G + + +FR LD+N DGRIS+EEL ++ELG A+
Sbjct: 598 SGSDAA-AEGLFRHLDQNSDGRISLEELQFALQELGVREAQAQSRAAAELLQLAAADGGE 656
Query: 516 NSDGSLSSDEFDLFQKQVEFMRNLEDRDDE 545
DG++ + F FQ++V ++ L D E
Sbjct: 657 AGDGTIGFEAFMAFQRRVGLLQALSAVDHE 686
>gi|303286241|ref|XP_003062410.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455927|gb|EEH53229.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1570
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 123/315 (39%), Positives = 182/315 (57%), Gaps = 23/315 (7%)
Query: 104 PDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHE 163
P R +A+ V L L DL MDAE +SAGLLR+ + SG V++ ++ +G G L H+
Sbjct: 237 PPLRPTHERAVEVTLALVDLGMDAECMSAGLLREALVSGSVTLDEIEASLGAGVMRLAHD 296
Query: 164 SLRVKNNVNLKLQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLM 223
R+ + + ++ DD A LR FCLT++D+RA++++LA D +RH LP+ ++
Sbjct: 297 CARL-HALPRRVGSFDDANAEKLRTFCLTFHDVRAVVVELAA--DALRHSSRLPKVKRTA 353
Query: 224 ISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYK 283
++LE M+++AP+AHA+ L ELEDLS + LFP SY ++ WLR + +D +
Sbjct: 354 LALETMQLYAPMAHALDAGPLCAELEDLSLKELFPSSYRSLEQWLRGEGPADRIALDRAR 413
Query: 284 EQLLQCLKTDATLADLV---EDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIK 340
E L L D L LV V V+ R KS +STM+K+L+DGR EEV+D+LG+RVI+
Sbjct: 414 EWLFDALVADPGLMTLVGGPRGVQVKARRKSLFSTMRKVLRDGRPREEVHDLLGMRVIVT 473
Query: 341 PSSNLVNTSEVGERA-------------CYTTREIIQSLWKEMPHRTKDYIARPKANGYR 387
P + + G A CY ++I ++ +P RTKDY+ RPK NGYR
Sbjct: 474 PQIGSPSFAAAGGGAIERAAAERSALAACYRAQQIAHGVFDVVPGRTKDYLQRPKPNGYR 533
Query: 388 SLH----MAVDVSDN 398
SLH + D +DN
Sbjct: 534 SLHSTLKLPTDWTDN 548
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 28/161 (17%)
Query: 405 MEIQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNH 464
+E+QIRT M A GTA+H YKGG A A ++AAA AA + S
Sbjct: 613 VELQIRTAAMHAAAEMGTAAHTAYKGGFKEDPGAADALAELVAAANTAA--TQRFGSFTE 670
Query: 465 KGFEFDWR------DRVFRLLDKNGDGRISIEELMEVMEEL-----------------GA 501
KG D + DR+FR+ D +GDG ++ +E+ V+ ++ GA
Sbjct: 671 KGLASDGKNADPDADRMFRMFDLDGDGVVTRDEIKRVINDVWLADAEAVDADSTTASGGA 730
Query: 502 PGED---AREMMQLLDSNSDGSLSSDEFDLFQKQVEFMRNL 539
E A E++++LD+N+DGS+S++EF F+ V+ +L
Sbjct: 731 QSESLGAADELIEMLDANNDGSVSAEEFTRFRASVKMFGSL 771
>gi|308801443|ref|XP_003078035.1| RelA/SpoT domain-containing protein / calcium-binding EF-hand
family protein (ISS) [Ostreococcus tauri]
gi|116056486|emb|CAL52775.1| RelA/SpoT domain-containing protein / calcium-binding EF-hand
family protein (ISS) [Ostreococcus tauri]
Length = 975
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 150/439 (34%), Positives = 231/439 (52%), Gaps = 44/439 (10%)
Query: 147 QQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRKFCLTYYDIRALILDLAIR 206
Q+ R +G L H+ RV +++ ++ D+ A LR F L+++D+RA++++LA R
Sbjct: 11 QRGRGDVGERVMRLAHDVGRV-HDLPKRVHSYDENAAERLRSFYLSFHDVRAIVVELACR 69
Query: 207 LDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDT 266
LD +R+ D L ++ ++LE M+I+AP+AHA+ T L ELEDL+F+ LFP SY ++
Sbjct: 70 LDALRNADALKPMERTTVALETMQIYAPMAHALNTGSLCAELEDLAFKILFPNSYASLEK 129
Query: 267 WLRSHETGSKPLIDIYKEQLLQCLKTDATLADLV--EDVSVQGRYKSRYSTMKKLLKDGR 324
WL + ++D + L ++ D T+ L+ V V R KSRYSTMKK+++DGR
Sbjct: 130 WLAAKSPEDSEILDKMTKMLDDAMQADPTMNALIGRGGVRVLARRKSRYSTMKKIIRDGR 189
Query: 325 IPEEVNDVLGLRVIIKPSSN------LVNTSEVGE---------------RACYTTREII 363
EEV+D+LG+R+++ P +V T G+ ACY ++II
Sbjct: 190 DREEVHDLLGMRLVLTPQPGSGAEPPVVGTVNSGDLTYEELEARALKAANAACYRAQQII 249
Query: 364 -QSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPL-----------MEIQIRT 411
S++ + TKDYI PK NGY SLH + V+ + +P+ +E+QIRT
Sbjct: 250 HHSMFPPVQGPTKDYIYNPKPNGYSSLHSTLKVAFDELGKPVSSREALKKGANVELQIRT 309
Query: 412 EEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFEFDW 471
M + A G ASH YKGGL A + +AA AA + + +
Sbjct: 310 AAMHLAAEAGKASHTSYKGGLKEDAGMAGYLAELASAANHAAKEKFGAFTHDDLRKRDES 369
Query: 472 RDRVFRLLDKNGDGRISIEELMEVMEELGAPGEDAREM-------MQLLDSNSDGSLSSD 524
D++F D NGDGR+++ EL V+ + A GE+ EM M LLD + DG++ S
Sbjct: 370 HDKLFEAFDLNGDGRVTLSELRTVLASIWA-GEEQEEMLNEAQALMTLLDVDQDGTIDSV 428
Query: 525 EFDLFQKQVEFMRNLEDRD 543
EF F+ V + L D
Sbjct: 429 EFAKFRASVTAISALPKAD 447
>gi|297564854|ref|YP_003683826.1| (p)ppGpp synthetase I SpoT/RelA [Meiothermus silvanus DSM 9946]
gi|296849303|gb|ADH62318.1| (p)ppGpp synthetase I, SpoT/RelA [Meiothermus silvanus DSM 9946]
Length = 738
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 135/359 (37%), Positives = 204/359 (56%), Gaps = 17/359 (4%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ ++VA +LA+L +DAE + AGLL VE V + + +R G ++ +V
Sbjct: 54 IVHPVAVAEILAELGLDAETLMAGLLHDTVEDTEVKPEDIEERFGTAVRRIVEGETKVSK 113
Query: 170 NVNLKLQV------LDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQL 222
L QV L+++ A LR+ F D+R +I+ LA RL +R L+++P ++Q
Sbjct: 114 LYKLAHQVAEERPSLEEQRAEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEFMPPHKQT 173
Query: 223 MISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIY 282
I+ E ++I+APLAH + + +ELEDLSFRYL P +Y + L+SH + ++
Sbjct: 174 RIARETLEIYAPLAHRLGIGQIKWELEDLSFRYLEPEAYADLLGRLKSHRAEREAAVERG 233
Query: 283 KEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVII--K 340
KE L L+ D+ L ++ V GR K YS KK+ ++GR E++ D+L LRVI+ +
Sbjct: 234 KEALEAVLQRDSVLGASIQGYEVTGRTKHLYSIWKKMQREGRALEQIYDLLALRVILEPR 293
Query: 341 PSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGK 400
P+ NL + ++ CY ++ +LW+ +P R KDYIA PK NGY+SLH V G
Sbjct: 294 PTPNLEEKAMREKQVCYHVLGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTVIA---GS 350
Query: 401 TRPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKR----LKAIMLAAAELAALR 455
PL E+QIRT EM +A G A+H YK GLT+PEE KR L++I AE ++ R
Sbjct: 351 GLPL-EVQIRTREMHQIAEYGIAAHWLYKQGLTDPEEIKRRVDWLRSIQEWQAEFSSSR 408
>gi|410696071|gb|AFV75139.1| (p)ppGpp synthetase, RelA/SpoT family [Thermus oshimai JL-2]
Length = 732
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 130/353 (36%), Positives = 202/353 (57%), Gaps = 11/353 (3%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++VA +LA L+MDAE + AGLL VVE GV+ +++ R G G ++ +V
Sbjct: 55 ITHPVAVAEILASLRMDAETVMAGLLHDVVEDCGVAPEELERRFGAGVRRIVEGETKVSK 114
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ ++ A LR+ F D+R +I+ LA RL +R L+++P +Q I+ E
Sbjct: 115 LYKMANLEGEERRAEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEHMPPEKQRRIAQET 174
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+APLAH + + +ELEDLSFRYL P +Y + L+ + + L++ +L +
Sbjct: 175 LEIYAPLAHRLGMGQIKWELEDLSFRYLHPEAYQSLLERLKEGQEAREKLVERAMARLKE 234
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVII--KPSSNLV 346
L+ D L ++ V GR K YS KK+ ++G+ E++ D+L +RVI+ KPS+
Sbjct: 235 ALEKDELLQAQIQGFEVTGRPKHLYSIWKKMEREGKALEQIYDLLAVRVILDPKPSATEE 294
Query: 347 NTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLME 406
S ++ CY ++ +LW+ +P R KDYIA PK NGY+SLH V ++ G +E
Sbjct: 295 ARSLREKQVCYHVLGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTV-IALEGLP---LE 350
Query: 407 IQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKR----LKAIMLAAAELAALR 455
+QIRT EM +A G A+H YK GLT+PEE KR LK+I E ++ R
Sbjct: 351 VQIRTREMHKVAEYGIAAHWLYKEGLTDPEEVKRRVSWLKSIQEWQQEFSSSR 403
>gi|149392399|gb|ABR26012.1| guanosine-3,5-bis 3-pyrophosphohydrolase [Oryza sativa Indica
Group]
Length = 224
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 117/222 (52%), Positives = 148/222 (66%), Gaps = 19/222 (8%)
Query: 249 EDLSF----RYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVS 304
EDLSF R L P + + E K ++ K+ LLQ L D L V
Sbjct: 1 EDLSFGASTRRLRPGGPM-----VSGQEDDCKRVLATCKDDLLQALAADDELRHTVAGFD 55
Query: 305 VQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQ 364
V+GRYKSR+S MKKL+KDGR PE+V+D+LG+RVI+ +L + G RAC T E+I+
Sbjct: 56 VKGRYKSRFSAMKKLVKDGRRPEDVHDILGMRVIL---DHLAGAGD-GHRACIRTHEVIK 111
Query: 365 SLWKEMPHRTKDYIARPKANGYRSLHMAVDVSD---NGKTRPLMEIQIRTEEMDMLAVNG 421
+WK++P RTKDYIARPK +GYRSLH+AVD+S+ GK RPLME+QIRT+EM+ AV G
Sbjct: 112 GMWKDVPARTKDYIARPKGDGYRSLHIAVDMSEPGPEGKKRPLMEVQIRTKEMNDAAVFG 171
Query: 422 TASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTN 463
HA YKG L +PEEAKRLK IMLAAAE+AA L+D P+T
Sbjct: 172 ---HALYKGCLADPEEAKRLKDIMLAAAEVAAQHLRDEPATG 210
>gi|328951506|ref|YP_004368841.1| (p)ppGpp synthetase I SpoT/RelA [Marinithermus hydrothermalis DSM
14884]
gi|328451830|gb|AEB12731.1| (p)ppGpp synthetase I, SpoT/RelA [Marinithermus hydrothermalis DSM
14884]
Length = 735
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 131/353 (37%), Positives = 199/353 (56%), Gaps = 12/353 (3%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++VA +LA+L+MD + + AGLL VE V++ + R G ++ +V
Sbjct: 53 ITHPVAVAGILAELKMDEDTLIAGLLHDTVEDTDVTLDAIEARFGPTVRRIVEGETKVSK 112
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + ++DE A LR+ F D+R +I+ LA RL MR L+++P +Q IS E
Sbjct: 113 LPKIA-ESIEDEQAENLRQMFIAMTEDVRIIIVKLADRLHNMRTLEFMPPEKQQRISRET 171
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I APLAH + + +ELEDL+FRYL P ++ L H + +++ K L +
Sbjct: 172 LEIFAPLAHRLGIGQIKWELEDLAFRYLHPEECAALEVRLSHHRAEHQAIVERAKAALEE 231
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVII--KPSSNLV 346
L D L V++ +V GR K YS KK+ +DG+ E++ D+L LRVI+ +PSS+
Sbjct: 232 ALAKDYVLKLAVQEYTVTGRTKHLYSIWKKMERDGKTLEQIYDLLALRVILDPRPSSDPE 291
Query: 347 NTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLME 406
++ CY ++ +LW+ +P R KDYIA PK NGY+SLH V ++ G +E
Sbjct: 292 EAKAREKQVCYHVIGLVHALWQPIPGRVKDYIAMPKPNGYQSLHTTV-ITWQGMP---LE 347
Query: 407 IQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKR----LKAIMLAAAELAALR 455
+QIRT EM +A G A+H YK GLTNPEE KR L+AI E ++ R
Sbjct: 348 VQIRTREMHRIAEYGIAAHWLYKEGLTNPEEVKRRVSWLRAIQEWQQEFSSSR 400
>gi|384440422|ref|YP_005655146.1| Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase (PpGpp
synthase) [Thermus sp. CCB_US3_UF1]
gi|359291555|gb|AEV17072.1| Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase (PpGpp
synthase) [Thermus sp. CCB_US3_UF1]
Length = 726
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 123/334 (36%), Positives = 194/334 (58%), Gaps = 7/334 (2%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++VA +LA L+MDAE ++AGLL VE GV+ +++ R G G ++ +V
Sbjct: 49 ITHPVAVAEILASLRMDAETVAAGLLHDTVEDCGVAPEELERRFGPGVRRIVEGETKVSK 108
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L +++ A LR+ F D+R +I+ LA RL +R L+++P ++Q I+ E
Sbjct: 109 LYKLANLEGEEKRAEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEHMPPHKQRRIAQET 168
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+APLAH + L +ELEDLSFRYL P +Y + + ++ + + +I L +
Sbjct: 169 LEIYAPLAHRLGIGQLKWELEDLSFRYLHPEAYHALLSRIQETQEARERVIHRAMAILEE 228
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVII--KPSSNLV 346
L+ D L ++ V GR K YS KK+ ++G+ E++ D+L +RVI+ KP+
Sbjct: 229 ALRKDELLQAQLQGFEVTGRPKHLYSIWKKMEREGKALEQIYDLLAVRVILDPKPAPTEE 288
Query: 347 NTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLME 406
+ ++ CY ++ +LW+ +P R KDYIA PK NGY+SLH V ++ G +E
Sbjct: 289 GQALREKQVCYHVLGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTV-IALEGLP---LE 344
Query: 407 IQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKR 440
+QIRT EM +A G A+H YK GLT+PEE KR
Sbjct: 345 VQIRTREMHRVAEYGIAAHWLYKEGLTDPEEVKR 378
>gi|218296101|ref|ZP_03496870.1| (p)ppGpp synthetase I, SpoT/RelA [Thermus aquaticus Y51MC23]
gi|218243478|gb|EED10007.1| (p)ppGpp synthetase I, SpoT/RelA [Thermus aquaticus Y51MC23]
Length = 726
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 122/334 (36%), Positives = 191/334 (57%), Gaps = 7/334 (2%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++VA +LA L+MDA+ ++AGLL +E GV+ +++ R G ++ +V
Sbjct: 49 ITHPVAVAEILASLRMDADTVAAGLLHDTMEDCGVAGEELERRFGPAVRRIVEGETKVSK 108
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+++ A LR+ F D+R +I+ LA RL +R L+++P +Q I+ E
Sbjct: 109 LYKFANLEGEEKRAEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEHMPEGKQKRIAQET 168
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+APLAH + + +ELEDLSFRYL P +Y + L+ + + ++ E L +
Sbjct: 169 LEIYAPLAHRLGMGQIKWELEDLSFRYLHPEAYQALLARLQETQEARERMVKRAMEVLEE 228
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVII--KPSSNLV 346
LK DA L ++ V GR K YS KK+ ++G+ E++ D+L +RVI+ KPS
Sbjct: 229 ALKQDALLQSQLQGFEVTGRPKHLYSIWKKMEREGKALEQIYDLLAVRVILDPKPSPTEE 288
Query: 347 NTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLME 406
++ CY ++ +LW+ +P R KDYIA PK NGY+SLH V ++ G +E
Sbjct: 289 AKGLREKQVCYHVLGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTV-IALEGLP---LE 344
Query: 407 IQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKR 440
+QIRT EM +A G A+H YK GLT+PEE KR
Sbjct: 345 VQIRTREMHRIAEYGIAAHWLYKEGLTDPEEVKR 378
>gi|381191174|ref|ZP_09898685.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Thermus
sp. RL]
gi|380450963|gb|EIA38576.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Thermus
sp. RL]
Length = 727
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 126/353 (35%), Positives = 197/353 (55%), Gaps = 11/353 (3%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++VA +LA LQMDA+ ++AGLL +E GV+ +++ R G ++ +V
Sbjct: 50 ITHPVAVAEILAGLQMDADTVAAGLLHDTLEDCGVAPEELERRFGPTVRRIVEGETKVSK 109
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L ++ A LR+ F D+R +I+ LA RL +R L+++P +Q I+ E
Sbjct: 110 LYKLANLEGEERRAEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEHMPPEKQKRIAQET 169
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+APLAH + L +ELEDLSFRYL P ++ + +++ + + LI L +
Sbjct: 170 LEIYAPLAHRLGMGQLKWELEDLSFRYLHPEAFASLSARIQATQEARERLIQKAIHLLQE 229
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L D L ++ V GR K YS KK+ ++G+ E++ D+L +RVI+ P
Sbjct: 230 TLARDELLQSQLQGFEVTGRPKHLYSIWKKMEREGKTLEQIYDLLAVRVILDPKPAPTRE 289
Query: 349 SEV--GERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLME 406
S+ ++ CY ++ +LW+ +P R KDYIA PK NGY+SLH V ++ G +E
Sbjct: 290 SQALREKQVCYHVLGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTV-IALEGLP---LE 345
Query: 407 IQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKR----LKAIMLAAAELAALR 455
+QIRT EM +A G A+H YK GLT+PEE KR LK+I E ++ R
Sbjct: 346 VQIRTREMHRVAEYGIAAHWLYKEGLTDPEEVKRRVSWLKSIQEWQKEFSSSR 398
>gi|46199657|ref|YP_005324.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Thermus
thermophilus HB27]
gi|384431896|ref|YP_005641256.1| (p)ppGpp synthetase I SpoT/RelA [Thermus thermophilus SG0.5JP17-16]
gi|46197283|gb|AAS81697.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Thermus
thermophilus HB27]
gi|333967364|gb|AEG34129.1| (p)ppGpp synthetase I, SpoT/RelA [Thermus thermophilus
SG0.5JP17-16]
Length = 727
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 126/353 (35%), Positives = 197/353 (55%), Gaps = 11/353 (3%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++VA +LA LQMDA+ ++AGLL +E GV+ +++ R G ++ +V
Sbjct: 50 ITHPVAVAEILAGLQMDADTVAAGLLHDTLEDCGVAPEELERRFGPTVRRIVEGETKVSK 109
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L ++ A LR+ F D+R +I+ LA RL +R L+++P +Q I+ E
Sbjct: 110 LYKLANLEGEERRAEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEHMPPEKQKRIAQET 169
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+APLAH + L +ELEDLSFRYL P ++ + +++ + + LI L +
Sbjct: 170 LEIYAPLAHRLGMGQLKWELEDLSFRYLHPEAFASLSARIQATQEARERLIQKAIHLLQE 229
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L D L ++ V GR K YS KK+ ++G+ E++ D+L +RVI+ P
Sbjct: 230 TLARDELLQSQLQGFEVTGRPKHLYSIWKKMEREGKTLEQIYDLLAVRVILDPKPAPTRE 289
Query: 349 SEV--GERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLME 406
S+ ++ CY ++ +LW+ +P R KDYIA PK NGY+SLH V ++ G +E
Sbjct: 290 SQALREKQVCYHVLGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTV-IALEGLP---LE 345
Query: 407 IQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKR----LKAIMLAAAELAALR 455
+QIRT EM +A G A+H YK GLT+PEE KR LK+I E ++ R
Sbjct: 346 VQIRTREMHRVAEYGIAAHWLYKEGLTDPEEVKRRVSWLKSIQEWQKEFSSSR 398
>gi|386359779|ref|YP_006058024.1| RelA/SpoT family (p)ppGpp synthetase [Thermus thermophilus JL-18]
gi|383508806|gb|AFH38238.1| (p)ppGpp synthetase, RelA/SpoT family [Thermus thermophilus JL-18]
Length = 724
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 126/353 (35%), Positives = 197/353 (55%), Gaps = 11/353 (3%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++VA +LA LQMDA+ ++AGLL +E GV+ +++ R G ++ +V
Sbjct: 47 ITHPVAVAEILAGLQMDADTVAAGLLHDTLEDCGVAPEELERRFGPTVRRIVEGETKVSK 106
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L ++ A LR+ F D+R +I+ LA RL +R L+++P +Q I+ E
Sbjct: 107 LYKLANLEGEERRAEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEHMPPEKQKRIAQET 166
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+APLAH + L +ELEDLSFRYL P ++ + +++ + + LI L +
Sbjct: 167 LEIYAPLAHRLGMGQLKWELEDLSFRYLHPEAFASLSARIQATQEARERLIQKAIHLLQE 226
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L D L ++ V GR K YS KK+ ++G+ E++ D+L +RVI+ P
Sbjct: 227 TLTRDELLQSQLQGFEVTGRPKHLYSIWKKMEREGKTLEQIYDLLAVRVILDPKPAPTRE 286
Query: 349 SEV--GERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLME 406
S+ ++ CY ++ +LW+ +P R KDYIA PK NGY+SLH V ++ G +E
Sbjct: 287 SQALREKQVCYHVLGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTV-IALEGLP---LE 342
Query: 407 IQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKR----LKAIMLAAAELAALR 455
+QIRT EM +A G A+H YK GLT+PEE KR LK+I E ++ R
Sbjct: 343 VQIRTREMHRVAEYGIAAHWLYKEGLTDPEEVKRRVSWLKSIQEWQKEFSSSR 395
>gi|55981686|ref|YP_144983.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Thermus
thermophilus HB8]
gi|55773099|dbj|BAD71540.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (ppGpp
synthase) [Thermus thermophilus HB8]
Length = 727
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 126/353 (35%), Positives = 197/353 (55%), Gaps = 11/353 (3%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++VA +LA LQMDA+ ++AGLL +E GV+ +++ R G ++ +V
Sbjct: 50 ITHPVAVAEILAGLQMDADTVAAGLLHDTLEDCGVAPEELERRFGPTVRRIVEGETKVSK 109
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L ++ A LR+ F D+R +I+ LA RL +R L+++P +Q I+ E
Sbjct: 110 LYKLANLEGEERRAEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEHMPPEKQKRIAQET 169
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+APLAH + L +ELEDLSFRYL P ++ + +++ + + LI L +
Sbjct: 170 LEIYAPLAHRLGMGQLKWELEDLSFRYLHPEAFASLSARIQATQEARERLIQRAIHLLQE 229
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L D L ++ V GR K YS KK+ ++G+ E++ D+L +RVI+ P
Sbjct: 230 TLARDELLQSQLQGFEVTGRPKHLYSIWKKMEREGKTLEQIYDLLAVRVILDPKPAPTRE 289
Query: 349 SEV--GERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLME 406
S+ ++ CY ++ +LW+ +P R KDYIA PK NGY+SLH V ++ G +E
Sbjct: 290 SQALREKQVCYHVLGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTV-IALEGLP---LE 345
Query: 407 IQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKR----LKAIMLAAAELAALR 455
+QIRT EM +A G A+H YK GLT+PEE KR LK+I E ++ R
Sbjct: 346 VQIRTREMHRVAEYGIAAHWLYKEGLTDPEEVKRRVSWLKSIQEWQKEFSSSR 398
>gi|291297171|ref|YP_003508569.1| (p)ppGpp synthetase I SpoT/RelA [Meiothermus ruber DSM 1279]
gi|290472130|gb|ADD29549.1| (p)ppGpp synthetase I, SpoT/RelA [Meiothermus ruber DSM 1279]
Length = 750
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/339 (35%), Positives = 189/339 (55%), Gaps = 12/339 (3%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ ++VA +LA+L +D E + AGLL +E V + + +R G ++ +V
Sbjct: 65 IVHPVAVAQILAELGLDVETLLAGLLHDTIEDTEVRPEDIEERFGAAVRKIVEGETKVSK 124
Query: 170 NVNLKLQVLDDETAAA-----LRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLM 223
L +D+ A LR+ F D+R +I+ LA RL +R L+++P ++Q
Sbjct: 125 LYKLAHAAQEDKHAEGKHAEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEFMPPHKQQR 184
Query: 224 ISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYK 283
I+ E ++I+APLAH + + ELEDLSFRYL P +Y ++ L+SH + + K
Sbjct: 185 IARETLEIYAPLAHRLGIGQVKLELEDLSFRYLDPENYQALERRLKSHRAEREAAVQAAK 244
Query: 284 EQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKP-- 341
E+L Q L D L ++ V GR K +S KK+ ++G+ E++ D+L LRVI+ P
Sbjct: 245 EKLEQALARDFILKQSIKKFEVTGRTKHLFSIWKKMEREGKTIEQIYDLLALRVILDPRQ 304
Query: 342 SSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKT 401
+ S ++ CY ++ +LW+ +P R KDYIA PK NGY+SLH V ++ NG
Sbjct: 305 GPDPEENSLREKQVCYHVLGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTV-IAVNGLP 363
Query: 402 RPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKR 440
+E+QIRT EM +A G A+H YK G+T+PE+ +R
Sbjct: 364 ---LEVQIRTREMHRVAEFGVAAHWLYKEGVTDPEDLRR 399
>gi|313679281|ref|YP_004057020.1| (p)ppGpp synthetase I SpoT/RelA [Oceanithermus profundus DSM 14977]
gi|313151996|gb|ADR35847.1| (p)ppGpp synthetase I, SpoT/RelA [Oceanithermus profundus DSM
14977]
Length = 734
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 123/335 (36%), Positives = 186/335 (55%), Gaps = 9/335 (2%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVES-GGVSIQQVRDRIGIGTAHLLHESLRVK 168
+T ++V +LA+LQMD + + AGLL VE VS + +R R G A ++ +V
Sbjct: 53 ITHPVAVTEILAELQMDPDSLIAGLLHDTVEDVESVSFETIRQRFGEDVARIVEGETKVS 112
Query: 169 NNVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLE 227
+ V +D+ A LR+ F D+R +I+ LA R MR L+++P +Q IS E
Sbjct: 113 KLSKMATSV-EDQQAENLRQMFIAMTRDLRIIIVKLADRTHNMRTLEFMPPEKQRRISKE 171
Query: 228 VMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLL 287
++I AP+AH + + ELEDL+FRYL P Y + L H + ++D K L
Sbjct: 172 TLEIFAPMAHRLGIGQIKLELEDLAFRYLHPEEYAALVERLAHHSQAHREVVDNAKGALE 231
Query: 288 QCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVII--KPSSNL 345
L+ D L V+ SV GR K +S KK+ ++ + E++ D+L LRVI+ KP ++
Sbjct: 232 HALENDYVLGLSVDGFSVSGRTKHLFSIWKKMQREEKTLEQIYDLLALRVILDPKPVASP 291
Query: 346 VNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLM 405
+ ++ CY ++ +LW +P R KDYIA+PK NGY+SLH V ++ G +
Sbjct: 292 EEAASREKQVCYHVLGLVHALWPPIPGRVKDYIAQPKPNGYQSLHTTV-ITPGGLP---L 347
Query: 406 EIQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKR 440
E+QIRT EM +A G A+H YK GLT+P + KR
Sbjct: 348 EVQIRTREMHRVAEYGVAAHWLYKEGLTDPNQLKR 382
>gi|320449341|ref|YP_004201437.1| GTP pyrophosphokinase [Thermus scotoductus SA-01]
gi|320149510|gb|ADW20888.1| GTP pyrophosphokinase [Thermus scotoductus SA-01]
Length = 667
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 126/353 (35%), Positives = 200/353 (56%), Gaps = 11/353 (3%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++VA +LA L+MDA+ + AGLL +E GV+ +++ R G L+ +V
Sbjct: 49 ITHPVAVAEILASLRMDADTVMAGLLHDTLEDCGVAPEELERRFGPAVRRLVEGETKVSK 108
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L +++ A LR+ F D+R +I+ LA RL +R L+++P +Q I+ E
Sbjct: 109 LYKLANLEGEEKRAEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEHMPPEKQRRIAQET 168
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+APLAH + L +ELEDLSFRYL P +Y + + ++ + + +I L +
Sbjct: 169 LEIYAPLAHRLGMGQLKWELEDLSFRYLHPEAYHALLSRIQETQEAREQIIRKAMVALEE 228
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVII--KPSSNLV 346
L+ D L ++ + V GR K YS KK+ ++G+ E++ D+L +RVI+ KP+
Sbjct: 229 ALRRDELLQAQLQGLEVTGRPKHLYSIWKKMEREGKALEQIYDLLAVRVILDPKPAPTEE 288
Query: 347 NTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLME 406
+ ++ CY ++ +LW+ +P R KDYIA PK NGY+SLH V ++ G +E
Sbjct: 289 GRALREKQVCYHVLGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTV-IALEGLP---LE 344
Query: 407 IQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKR----LKAIMLAAAELAALR 455
+QIRT EM +A G A+H YK GLT+PEE KR LK+I E ++ R
Sbjct: 345 VQIRTREMHRIAEYGIAAHWLYKEGLTDPEELKRRVSWLKSIQEWQQEFSSSR 397
>gi|384250784|gb|EIE24263.1| Nucleotidyltransferase, partial [Coccomyxa subellipsoidea C-169]
Length = 371
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 128/336 (38%), Positives = 184/336 (54%), Gaps = 40/336 (11%)
Query: 130 ISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRKF 189
I+AG++ V G + + V +R+G A L+ + L+V+ + + V DD ALR+
Sbjct: 1 IAAGIVASAVHEGQLPLAVVEERLGPIPALLIRDMLKVRT-LPQRCDVYDDVATGALREL 59
Query: 190 CLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELE 249
CL +YD RA++++LA +LE ++I AP+ HA+ +S ELE
Sbjct: 60 CLNFYDARAIVVELA--------------------ALEALQIFAPMGHALGLASVSAELE 99
Query: 250 DLSFR---YLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQ 306
D F+ +LFP SY WL T + + + +L L+ DATLA LV +Q
Sbjct: 100 DRCFQARHWLFPRSYAQTAEWLWRERTAYQDTLARCQARLDSALREDATLASLVAFCQIQ 159
Query: 307 GRYKSRYSTMKKLL------KDGRIPEEVNDVLGLRVIIKPSSNL-VNTSEVGE-RACYT 358
GR KS YSTMKKLL K GR +EV D+LG+RVI+ P +L V E+ +ACY
Sbjct: 160 GRTKSLYSTMKKLLRMDDVAKGGRGRDEVYDLLGMRVIVTPYPDLPVEEGELAATQACYR 219
Query: 359 TREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLA 418
RE+ ++LW+ + R KDYIA K NGYRSLH + V P + +QIR++ M A
Sbjct: 220 VRELAKALWEPIEERDKDYIAAAKPNGYRSLHSTLRV-------PSLTLQIRSKRMHEEA 272
Query: 419 VNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAAL 454
+G A+HA YKGGL P+ A+RL + +A AL
Sbjct: 273 QSGEAAHAAYKGGLA-PDLARRLHGFLEISANPPAL 307
>gi|320334134|ref|YP_004170845.1| (p)ppGpp synthetase I SpoT/RelA [Deinococcus maricopensis DSM
21211]
gi|319755423|gb|ADV67180.1| (p)ppGpp synthetase I, SpoT/RelA [Deinococcus maricopensis DSM
21211]
Length = 748
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 117/333 (35%), Positives = 183/333 (54%), Gaps = 18/333 (5%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++VAL+LA+L MD + I AG L VE V+ QQ+ D G ++ +V +
Sbjct: 42 ITHPVAVALILAELGMDTDAICAGFLHDTVEDTDVTFQQIEDHFGRDVRRIVEGETKV-S 100
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + L D+ + LR+ + D IR +++ LA RL MR L + +Q IS E
Sbjct: 101 KLTKQTTSLQDQQSENLRQMLIAMTDDIRIIVVKLADRLHNMRTLGSMRPDKQQRISRET 160
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+APLAH + + +ELEDLSF+YL P +Y + LR+ + + + + +QL +
Sbjct: 161 IEIYAPLAHRLGIGQIKWELEDLSFKYLEPEAYADLARRLRTRQDQREAHVKLALQQLRE 220
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L D L + ++++ + GR K YS K+ K+G+ E++ D+L +RVI+ P VN
Sbjct: 221 ALTEDLELPEWIDNIDIAGRSKHLYSIHTKMRKEGKALEQIFDLLAIRVILTPKP--VNA 278
Query: 349 SEVGE----------RACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDN 398
E + R CY + I+ S+W +P R KDYIA PK NGY+SLH V +S
Sbjct: 279 PEGKQKDRAEEVREKRVCYHSLGIVHSMWTPIPGRFKDYIAVPKPNGYQSLHTTV-ISTE 337
Query: 399 GKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGG 431
G+ +E+QIR+ M +A G A+H YK G
Sbjct: 338 GQP---IEVQIRSRRMHEVAEYGVAAHWMYKQG 367
>gi|429221371|ref|YP_007183015.1| RelA/SpoT family (p)ppGpp synthetase [Deinococcus peraridilitoris
DSM 19664]
gi|429132234|gb|AFZ69249.1| (p)ppGpp synthetase, RelA/SpoT family [Deinococcus peraridilitoris
DSM 19664]
Length = 746
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/331 (35%), Positives = 180/331 (54%), Gaps = 14/331 (4%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++VA +LADL MD + + AGLL VE V+ +QV G+ ++ +V
Sbjct: 38 ITHPVTVAQILADLGMDTDGVIAGLLHDTVEDTDVTFEQVEQDFGVVVRRIVEGETKVSK 97
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ L DE + LR+ + DIR +I+ LA RL MR L +P ++Q I+ E
Sbjct: 98 LTKMSSN-LHDEQSENLRQMLIAMTGDIRVIIVKLADRLHNMRTLASMPAHKQQRIARET 156
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I APLAH + + +ELEDLSF+YL P +Y ++ LR+ ++ + I EQL
Sbjct: 157 LEIFAPLAHRLGIGQIKWELEDLSFKYLDPDAYESLERRLRTRQSERERHIVGALEQLRA 216
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L+ D L + V + GR K YS K+ K+G+ E++ D+L +RVI++P
Sbjct: 217 TLEEDVELPEWVASTDITGRGKHLYSIHNKMRKEGKSLEQIFDLLAVRVILRPKPVEAPP 276
Query: 349 SEVGERA--------CYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGK 400
+ ERA CY ++ S+W +P R KDYIA PK NGY+SLH V +S G+
Sbjct: 277 GKAKERAEDAREKRVCYHALGLVHSMWTPIPGRFKDYIAVPKPNGYQSLHTTV-ISTAGQ 335
Query: 401 TRPLMEIQIRTEEMDMLAVNGTASHAFYKGG 431
+E+QIR++ M +A G A+H YK G
Sbjct: 336 P---IEVQIRSQRMHEVAEFGIAAHWMYKQG 363
>gi|160903362|ref|YP_001568943.1| (p)ppGpp synthetase I SpoT/RelA [Petrotoga mobilis SJ95]
gi|160361006|gb|ABX32620.1| (p)ppGpp synthetase I, SpoT/RelA [Petrotoga mobilis SJ95]
Length = 712
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 130/355 (36%), Positives = 190/355 (53%), Gaps = 29/355 (8%)
Query: 115 SVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN-NVNL 173
SV L+LA L+MD + I AGLL VVE GVSI +++D GI A+++ ++ N +N
Sbjct: 56 SVGLILAGLKMDVDTIIAGLLHDVVEDCGVSIDKIKDLFGIDVANIVSGVTKISNLKLNE 115
Query: 174 KLQVLDD---ETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVM 229
+L D E +RK DIR +I+ LA RL MR L+++ R +Q+ + E +
Sbjct: 116 RLNENDMKSLEKVETIRKMLFAMSEDIRVIIVKLADRLHNMRTLEFVDRKKQIAKADETL 175
Query: 230 KIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQC 289
KI+AP+AH + + ELEDLSFRYL+P +Y + T + + ++ Y + + Q
Sbjct: 176 KIYAPIAHRLGIYKMKEELEDLSFRYLYPETYFDLKTKIEEKIRLGQNRLNEYAQIIKQE 235
Query: 290 LKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTS 349
L A +V+GR K YS K+++ G+ +E+ D + LR+I +
Sbjct: 236 LDNQKIKA------TVEGRSKHLYSIWDKMIRKGKTLDEIYDYIALRIITED-------- 281
Query: 350 EVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQI 409
+ CY II S+W +P R KDYIA PK NGY+SLH V ++ G PL EIQI
Sbjct: 282 ---QNKCYAVLGIIHSIWSPVPGRIKDYIATPKFNGYKSLHTTV-ITHKGD--PL-EIQI 334
Query: 410 RTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELA--ALRLKDIPST 462
R EM A G A+H YK G++ E+ K L +M +A A LKDI +
Sbjct: 335 RDWEMHEEAEYGLAAHWVYKEGVS-QEKLKFLTDLMELHRYIAQNAFELKDIETN 388
>gi|325282797|ref|YP_004255338.1| (p)ppGpp synthetase I, SpoT/RelA [Deinococcus proteolyticus MRP]
gi|324314606|gb|ADY25721.1| (p)ppGpp synthetase I, SpoT/RelA [Deinococcus proteolyticus MRP]
Length = 764
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 123/348 (35%), Positives = 180/348 (51%), Gaps = 24/348 (6%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVES-GGVSIQQVRDRIGIGTAHLLHESLRVK 168
+T ++VA +LA+L MD I+AGLL VE GV+ + + + G + ++ +V
Sbjct: 49 ITHPVAVATILAELGMDTTSIAAGLLHDTVEDVDGVTFEVITAQFGPEVSRIVEGETKVS 108
Query: 169 NNVNLKLQVLD------DETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQ 221
Q + D A LR+ + D +R +++ LA RL MR +D +P +Q
Sbjct: 109 KLSKAGSQTAEVSDDGRDMQAENLRQMLIAMTDDLRIIVVKLADRLHNMRTMDAMPPEKQ 168
Query: 222 LMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDI 281
IS E M++ APLAH + + +ELEDLSFRYL+P Y + + LR ++
Sbjct: 169 KRISRETMEVFAPLAHRLGIGQVKWELEDLSFRYLYPEEYAELRSRLRMQLDERDGIVKQ 228
Query: 282 YKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKP 341
+E L L+ D L D V + + GR K +S K+ ++G+ E++ D++ LRVI+ P
Sbjct: 229 AEESLRSALEDDLELPDWVAAIDISGRSKHLWSIFGKMRREGKALEQIFDLMALRVILTP 288
Query: 342 ----------SSNLVNTSEVGE-RACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLH 390
L E+ E R CY T I+ SLW +P R KDYIA PK NGY+SLH
Sbjct: 289 RRVEAREGTDPERLARAEEMREKRICYHTISIVHSLWTPLPGRFKDYIAVPKPNGYQSLH 348
Query: 391 MAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYK-GGLTNPEE 437
V GK+ +EIQIR+ M +A G A+H YK GG N E
Sbjct: 349 TTV----IGKSGQPIEIQIRSSRMHEVAEYGVAAHWMYKQGGQLNQRE 392
>gi|347731510|ref|ZP_08864606.1| relA/SpoT family protein [Desulfovibrio sp. A2]
gi|347519829|gb|EGY26978.1| relA/SpoT family protein [Desulfovibrio sp. A2]
Length = 722
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/330 (35%), Positives = 178/330 (53%), Gaps = 26/330 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L+ L+VA LA+++ D I+AGLL VE VSI+ + G A ++ ++
Sbjct: 46 LSHPLAVAYSLAEMRFDEAAIAAGLLHDTVEDTTVSIEDIDTLFGEEVADVVDGVTKISQ 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + ++ A +RK L +DIR LI+ LA RL MR LD+ ++Q +I+ E
Sbjct: 106 ---MTFESKEEAQAENIRKMILAMAHDIRVLIVKLADRLHNMRTLDFQKPHKQKLIAQET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M I+APLA+ + + + ELEDLSFRYL P Y ++ WL +++ I+ ++ +
Sbjct: 163 MDIYAPLANRLGLHRIKLELEDLSFRYLKPDVYAQINEWLDTNQVVESHYIERVITRIKE 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L + + V+GR K +YS KK+++ ++++D++ RVI+
Sbjct: 223 ILDKNEVKGE------VRGRIKHKYSIYKKMVQQDLTLDDMHDIIAFRVIVDDL------ 270
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY ++ + WK + R KDYI+ PKANGYRSLH V + G+ MEIQ
Sbjct: 271 -----RDCYAVLGLMHAQWKPVHGRFKDYISMPKANGYRSLHTTV-IGPEGER---MEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK-GGLTNPEE 437
IRTEEM LA +G ASH YK GG NP +
Sbjct: 322 IRTEEMHRLAEHGVASHWLYKEGGRVNPRD 351
>gi|449020118|dbj|BAM83520.1| ppGpp synthetase/hydrolase Rel [Cyanidioschyzon merolae strain 10D]
Length = 988
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/349 (35%), Positives = 176/349 (50%), Gaps = 31/349 (8%)
Query: 106 SRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESL 165
S + L +A + +LA+LQMD++ I AG+L ++VESG S+ + ++ G A L+
Sbjct: 266 SEASLERATGITSILAELQMDSDTIIAGILTELVESGVASLASIAEQFGNAVARLIEGEA 325
Query: 166 RVKNNVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMI 224
+V + + DE LR+ F D R +++ LA RL MR L LP +Q I
Sbjct: 326 KVSRLPEMAESPIADENVENLRQMFIAMASDFRIIVIKLAARLHTMRTLQTLPAERQRRI 385
Query: 225 SLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKP----LID 280
+ E + I APLAH + + LE+L+F YL+P Y + RSH G P +++
Sbjct: 386 ARETLDIFAPLAHRLGIWSVKSHLENLAFLYLYPEEYRKI----RSHIEGRMPSYKRILE 441
Query: 281 IYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIP--EEVNDVLGLRVI 338
K +L L +D L V + V R K YS +KL + GR + + D++ LRV
Sbjct: 442 ESKARLEHALSSDPILRRTVSRIEVAARSKEIYSIWQKLQR-GRAQRLDHIYDLVALRVT 500
Query: 339 IKPSSNL--VNTSEVGE----------------RACYTTREIIQSLWKEMPHRTKDYIAR 380
I P +L V TS E CY I+ LW +P R KDYIA
Sbjct: 501 IDPREDLSVVGTSGTNEMDRDEAEKTRLRDDENGLCYYVLGIVHQLWHPVPGRVKDYIAF 560
Query: 381 PKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYK 429
PK NGY+SLH V V DNG + +E+QIRT MD A G A+H ++K
Sbjct: 561 PKPNGYQSLHTTV-VVDNGSDQAPLEVQIRTRAMDRTAEYGMAAHWYFK 608
>gi|218885891|ref|YP_002435212.1| (p)ppGpp synthetase I SpoT/RelA [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218756845|gb|ACL07744.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 722
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 118/331 (35%), Positives = 180/331 (54%), Gaps = 28/331 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L+ L+VA LA+++ D I+AGLL VE VSI+ + G A ++ ++
Sbjct: 46 LSHPLAVAYSLAEMRFDEAAIAAGLLHDTVEDTTVSIEDIDTLFGEEVADVVDGVTKISQ 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + ++ A +RK L +DIR LI+ LA RL MR L + ++Q +I+ E
Sbjct: 106 ---MTFESKEEAQAENIRKMILAMAHDIRVLIVKLADRLHNMRTLGFQKSHKQKLIAQET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M I+APLA+ + + + ELEDLSFRYL P Y +D WL +++ + I+ ++ +
Sbjct: 163 MDIYAPLANRLGLHRIKLELEDLSFRYLKPDVYAQIDEWLDTNQVVERHYIERVITRIRE 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L+ + + V+GR K +YS KK+++ ++++D++ RVI
Sbjct: 223 ILEKNEIKGE------VRGRIKHKYSIYKKMVQQDLTLDDMHDIIAFRVI---------- 266
Query: 349 SEVGE-RACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEI 407
VG+ R CY ++ + WK + R KDYI+ PKANGYRSLH V + G+ MEI
Sbjct: 267 --VGDLRDCYAVLGLMHAQWKPVHGRFKDYISMPKANGYRSLHTTV-IGPEGER---MEI 320
Query: 408 QIRTEEMDMLAVNGTASHAFYK-GGLTNPEE 437
QIRTEEM LA +G ASH YK G NP +
Sbjct: 321 QIRTEEMHRLAEHGVASHWLYKEGSRVNPRD 351
>gi|313672627|ref|YP_004050738.1| (p)ppGpp synthetase I SpoT/RelA [Calditerrivibrio nitroreducens DSM
19672]
gi|312939383|gb|ADR18575.1| (p)ppGpp synthetase I, SpoT/RelA [Calditerrivibrio nitroreducens
DSM 19672]
Length = 710
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 118/330 (35%), Positives = 182/330 (55%), Gaps = 26/330 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L+ L+VAL+LA++ MD + ++AG+L +E + +++ + G A L+ ++
Sbjct: 50 LSHPLNVALILANMNMDLDTVTAGILHDTLEDTDATYEELAELFGEDVAFLVDGVSKIGK 109
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + +++ A RK ++ D+R +++ LA RL MR LDYL ++ I+ E
Sbjct: 110 ---ISFKSSEEKMAENFRKMLISMSKDVRVIVIKLADRLHNMRTLDYLSEEKKQRIAKET 166
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLAH + ++ +ELEDLSFR L P Y + ++ + + Y Q++
Sbjct: 167 MEIYAPLAHRLGIAWIKWELEDLSFRILNPDKYYEIYNLVKLKRSER----EAYLNQVIN 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L DA L ++ V GR K YS K++K +E+ D+L +RVI+K S+
Sbjct: 223 LL--DAHLKNVNIQAEVTGRPKHFYSIYSKMIKKKTSFDEIYDLLAVRVIVKTVSD---- 276
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY T II +LWK +P R KDYIA PKAN Y+SLH V V NG +EIQ
Sbjct: 277 -------CYATLGIIHNLWKPIPGRFKDYIAMPKANMYQSLHTTV-VGPNGLN---VEIQ 325
Query: 409 IRTEEMDMLAVNGTASHAFYK-GGLTNPEE 437
IRTEEM +A G A+H YK G + NP++
Sbjct: 326 IRTEEMHRIAEEGIAAHWKYKEGKVFNPKD 355
>gi|15806838|ref|NP_295561.1| GTP pyrophosphokinase [Deinococcus radiodurans R1]
gi|6459617|gb|AAF11392.1|AE002024_3 GTP pyrophosphokinase [Deinococcus radiodurans R1]
Length = 787
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 120/341 (35%), Positives = 180/341 (52%), Gaps = 23/341 (6%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVES-GGVSIQQVRDRIGIGTAHLLHESLRVK 168
+T ++VA++LA L MD + + AGLL VE GV+ + + G ++ +V
Sbjct: 79 ITHPVAVAIILARLGMDTDSLMAGLLHDTVEDVEGVTFEVIERNFGPDVRRIVEGETKVS 138
Query: 169 N---NVNLKLQVLDDE---TAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQ 221
N + +V D A LR+ + D+R +++ LA RL MR L + +Q
Sbjct: 139 KLSKQGNQQAEVPGDGRDMQAENLRQMLIAMTVDLRIIVVKLADRLHNMRTLGSMKPEKQ 198
Query: 222 LMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDI 281
I+ E M+I APLAH + + +ELEDLSFRYL P +Y ++ T LR+ + LI
Sbjct: 199 QRIARETMEIFAPLAHRLGIGRIKWELEDLSFRYLHPDAYEYLQTRLRTRQEERDELIVN 258
Query: 282 YKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKP 341
+L L+ D L + VED+ + GR K +S K+ K+G+ E++ D+L LRVI+KP
Sbjct: 259 AVAELQDALEDDLELLEWVEDIDIAGRSKHLWSIHNKMQKEGKALEQIFDLLALRVILKP 318
Query: 342 SSNLV-----------NTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLH 390
V +R CY T ++ S+W +P R KDYIA PK NGY+SLH
Sbjct: 319 RPLTVPEGVEESRRERAEENREKRVCYHTLSVVHSMWTPLPGRVKDYIAVPKPNGYQSLH 378
Query: 391 MAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGG 431
V +S +G+ +E+QIR+ M +A G A+H YK G
Sbjct: 379 TTV-ISRSGQP---IEVQIRSLRMHEVAEYGVAAHWMYKQG 415
>gi|108804177|ref|YP_644114.1| (p)ppGpp synthetase I SpoT/RelA [Rubrobacter xylanophilus DSM 9941]
gi|108765420|gb|ABG04302.1| (p)ppGpp synthetase I, SpoT/RelA [Rubrobacter xylanophilus DSM
9941]
Length = 742
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/329 (37%), Positives = 174/329 (52%), Gaps = 25/329 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+ A +LADL+MD I+A LL V+E GV+ +++ R G A ++ ++K L
Sbjct: 67 LATADILADLRMDPTTIAAALLHDVLEDTGVTKEELAGRFGAEVAEIVDGVTKLKR---L 123
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
L++ A +LRK + D+R +I+ LA RL MR L+YL R QL + E ++I+
Sbjct: 124 PSGNLEEAQAESLRKMIVAMSRDVRVIIIKLADRLHNMRTLEYLKRETQLEKATETLEIY 183
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + L +ELEDL+F L P Y + + + + I +L + L
Sbjct: 184 APLAHRLGIYSLKWELEDLAFATLHPRRYEEIKRLVAARRDEREAFISARAAELKRYLSE 243
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
A+ V+GR K YS K+++ + E+ D+ GLRVI+
Sbjct: 244 AGIEAE------VRGRVKHFYSIYNKMVRRNKEFNEIYDLAGLRVIVGSV---------- 287
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
R CY +I S+WK +P R KDYIA PK N Y+SLH V +S+ GK L+EIQIRTE
Sbjct: 288 -RDCYGALGVIHSVWKPIPGRFKDYIAMPKFNMYQSLHTTV-MSNEGK---LLEIQIRTE 342
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRL 441
EMD A G A+H YK G+ A RL
Sbjct: 343 EMDRTAEYGIAAHWMYKEGVGENGRADRL 371
>gi|374339110|ref|YP_005095846.1| RelA/SpoT family (p)ppGpp synthetase [Marinitoga piezophila KA3]
gi|372100644|gb|AEX84548.1| (p)ppGpp synthetase, RelA/SpoT family [Marinitoga piezophila KA3]
Length = 717
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 179/323 (55%), Gaps = 26/323 (8%)
Query: 115 SVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN-NVNL 173
+V+ +LA+L+MD E I++ LL VVE V I+++ + G + ++ ++ N +N
Sbjct: 56 AVSKILAELKMDVESIASALLHDVVEDCDVPIEKITNEFGPEISRIVDGVTKISNLKLNE 115
Query: 174 KLQVLDD---ETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVM 229
KL +D E +RK L DIR +I+ LA RL MR L Y+P +Q++ S E +
Sbjct: 116 KLNKVDMKSLEKIETIRKMLLAMSNDIRVIIVKLADRLHNMRTLQYVPYKKQVIKSQETL 175
Query: 230 KIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQC 289
KI+AP+AH + + + ELEDLSF+YL+P +Y + L + ++ YK + +
Sbjct: 176 KIYAPIAHRLGIHKIKAELEDLSFKYLYPEAYEDLKRKLEERVSNVHDRMEEYKTTIKEQ 235
Query: 290 LKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTS 349
L+ A L QGR K YS +K+L+ + E++ D + LR+I + +
Sbjct: 236 LEKHNIKATL------QGRTKHLYSIWEKMLRKNKSFEDIYDFIALRIITESPT------ 283
Query: 350 EVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQI 409
ACY ++ S+W+ +P R KDYIA PK+NGYRS+H V +++ G+T +EIQI
Sbjct: 284 -----ACYAALGVVHSVWRPVPGRIKDYIAVPKSNGYRSIHTTV-ITNKGET---LEIQI 334
Query: 410 RTEEMDMLAVNGTASHAFYKGGL 432
R EM + G A+H YK G+
Sbjct: 335 RDWEMHEESEYGLAAHWAYKQGV 357
>gi|226356444|ref|YP_002786184.1| GTP diphosphokinase [Deinococcus deserti VCD115]
gi|226318434|gb|ACO46430.1| putative GTP diphosphokinase (ppGpp synthetase I) (RelA/SpoT) (GTP
pyrophosphokinase) [Deinococcus deserti VCD115]
Length = 760
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 116/341 (34%), Positives = 179/341 (52%), Gaps = 23/341 (6%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVES-GGVSIQQVRDRIGIGTAHLLHESLRVK 168
+T ++VA++LA L MD E + AGLL VE GV+ + + + G ++ +V
Sbjct: 42 ITHPVAVAVILARLGMDTESVMAGLLHDTVEDVEGVTFESIEELFGPDVRRIVEGETKVS 101
Query: 169 NNVNLKLQVLD------DETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQ 221
Q + D A LR+ + DIR +++ LA RL MR L + +Q
Sbjct: 102 KLSKQGSQQAEVAHTGRDMQAENLRQMLIAMTADIRIIVVKLADRLHNMRTLGSMKPEKQ 161
Query: 222 LMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDI 281
I+ E M+I APLAH + + +ELEDLSF+YL P Y ++ + LR+ + LI
Sbjct: 162 QRIARETMEIFAPLAHRLGIGKIKWELEDLSFQYLQPDDYAYLQSRLRTRQEERDALIQG 221
Query: 282 YKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKP 341
+QL + L+ D L + V ++ + GR K +S K+ ++G+ E++ D+L +RVI+ P
Sbjct: 222 AVKQLREALEDDLELPEWVGEIDIAGRSKHLWSIHTKMKREGKALEQIFDLLAIRVILTP 281
Query: 342 SSNLV-----------NTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLH 390
+V +R CY T I+ S+W +P R KDYIA PK NGY+SLH
Sbjct: 282 KDLIVPPGTDEKRRERAEETREKRICYHTVSIVHSMWTPLPGRFKDYIAVPKPNGYQSLH 341
Query: 391 MAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGG 431
V +S +G+ +E+QIR+ M +A G A+H YK G
Sbjct: 342 TTV-ISQSGQP---IEVQIRSRRMHEVAEYGVAAHWMYKQG 378
>gi|386856222|ref|YP_006260399.1| ppGpp synthetase I, SpoT/RelA [Deinococcus gobiensis I-0]
gi|379999751|gb|AFD24941.1| ppGpp synthetase I, SpoT/RelA [Deinococcus gobiensis I-0]
Length = 753
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/341 (34%), Positives = 180/341 (52%), Gaps = 23/341 (6%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVES-GGVSIQQVRDRIGIGTAHLLHESLRVK 168
+T ++VA++LA L MD++ + AGLL VE GV+ + G ++ +V
Sbjct: 42 ITHPVAVAVILAKLGMDSDSLMAGLLHDTVEDVEGVTFAGIEALFGADVRRIVEGETKVS 101
Query: 169 N---NVNLKLQVLD---DETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQ 221
+ QV D D A LR+ + DIR +++ LA RL MR L + +Q
Sbjct: 102 KLSKQGSQAAQVSDTGRDVQAENLRQMLVAMTADIRIIVVKLADRLHNMRTLGSMKPEKQ 161
Query: 222 LMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDI 281
I+ E M+I APLAH + + +ELEDLSFRYL P +Y ++ T LR+ + + LI
Sbjct: 162 ARIARETMEIFAPLAHRLGIGQIKWELEDLSFRYLNPDAYEYLSTRLRTRQEEREALIAE 221
Query: 282 YKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKP 341
QL + L D L + V + + GR K +S K+ K+G+ E++ D+L +RVI++P
Sbjct: 222 AVAQLREGLDDDLELHEWVSGIDIAGRSKHLWSIHNKMQKEGKGLEQIFDLLAIRVILRP 281
Query: 342 SSNLV-----------NTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLH 390
+V +R CY T ++ S+W +P R KDYIA PK NGY+SLH
Sbjct: 282 RDLVVPPGTDEKRRERAEETREKRICYHTVSVVHSMWTPLPGRFKDYIAVPKPNGYQSLH 341
Query: 391 MAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGG 431
V +S +G+ +E+QIR+ M +A G A+H YK G
Sbjct: 342 TTV-ISQSGQP---IEVQIRSLRMHEVAEYGVAAHWMYKQG 378
>gi|452821586|gb|EME28615.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Galdieria
sulphuraria]
Length = 576
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 117/348 (33%), Positives = 181/348 (52%), Gaps = 14/348 (4%)
Query: 89 ALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGV---S 145
AL+LS + +L + +S S +TKAL + +LA +D + A +L V G V +
Sbjct: 234 ALRLSAEWIHNL-VGNNSSSLMTKALDMIEMLASFNVDKYCLIASILS--VLEGKVKYPT 290
Query: 146 IQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRKFCLTYYDIRALILDLAI 205
+ ++ ++L E + + N +L L + + + + D RA++L L
Sbjct: 291 LARLCLLFDYSVLNILREYIFMGNMAHLMLDMPEGNSTWVKTHLWASITDSRAVLLRLVE 350
Query: 206 RLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVD 265
RL +R + P Y Q +LE +++ PLA A +E+ D S R LFP SYL ++
Sbjct: 351 RLWSLRQIYKWPLYIQQSTALETLQVFVPLASAAGFGRHMYEMGDRSLRILFPQSYLKLE 410
Query: 266 TW-LRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGR 324
W LR + G + ++ + +LL CL D L L E ++ GR K+ ST K+LK +
Sbjct: 411 KWHLRIRDNGQR-VLSCAQRELLTCLMRDPFLVRLAEQFTITGRTKNMVSTFMKMLKQNK 469
Query: 325 IPEEVNDVLGLRVII--KPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPK 382
E++ D + +RV+I +P + + + C EI+ SLWKE+ R KDY+ PK
Sbjct: 470 TKEQILDFIAMRVVIRLRPGVRVEHGDDTELAVCTRVYEIVSSLWKEVEGRYKDYVIAPK 529
Query: 383 ANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKG 430
NGYRS+H V +E+QIRTEEM +LA +GTASH FYKG
Sbjct: 530 PNGYRSIHTTVQHPSGFP----VEVQIRTEEMHLLAEHGTASHRFYKG 573
>gi|428178872|gb|EKX47745.1| hypothetical protein GUITHDRAFT_41256, partial [Guillardia theta
CCMP2712]
Length = 303
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/311 (35%), Positives = 170/311 (54%), Gaps = 15/311 (4%)
Query: 129 VISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRK 188
V+ + +L V SIQ+VRDR G ++ +S+ + + + ++ +LDD+ + LR+
Sbjct: 1 VLVSAVLLPCVRERSASIQEVRDRFGPVVGSMVEDSVWL-SQLPDRVGLLDDDGSRFLRE 59
Query: 189 FCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFE 247
+ + D RA+I+ LA RL+ +R ++ P Y Q + +LE +++ +PLAHA+ +E
Sbjct: 60 YMVAASRDHRAVIVMLADRLNALRKIEEAPLYDQHLKALESLQVFSPLAHALGVGKWLWE 119
Query: 248 LEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQG 307
LEDLSFR LFP SY V+ W S +++ K +L+ L + L + VE ++
Sbjct: 120 LEDLSFRALFPDSYTSVEQWQLELWEVSSNMMEQAKVDVLKALNENDFLLEHVERYAITS 179
Query: 308 RYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSL- 366
R KS +ST KK+ + + E+V DV +RV+I S + V R C ++
Sbjct: 180 RRKSVFSTFKKMFRSNKKLEDVKDVFAMRVVIGLKSQFRSDDSVQVRTCTEAYGAVRKAL 239
Query: 367 --WKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPL---MEIQIRTEEMDMLAVNG 421
W+E R KDY+ PK NGY+S+H +D PL +E+QIRTEEM A G
Sbjct: 240 VGWEEPRGRFKDYVTHPKPNGYQSIHTTLD-------SPLKLPLEVQIRTEEMHAAAEFG 292
Query: 422 TASHAFYKGGL 432
ASH YKGG+
Sbjct: 293 DASHNLYKGGI 303
>gi|212702010|ref|ZP_03310138.1| hypothetical protein DESPIG_00012 [Desulfovibrio piger ATCC 29098]
gi|212674525|gb|EEB35008.1| RelA/SpoT family protein [Desulfovibrio piger ATCC 29098]
Length = 719
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 170/321 (52%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L+ L+VA LAD+ D ++AGLL VE G +I+++ D+ G A ++ ++
Sbjct: 46 LSHPLAVAYTLADMGFDEPTVAAGLLHDTVEDTGTTIEEIDDKFGEDVADIVDGVTKISM 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
V + ++ A +RK L +D+R L++ LA RL M LD+ ++Q I+ E
Sbjct: 106 IV---FENKEEAQAENIRKMILAMSHDMRVLMVKLADRLHNMSTLDFQKPHKQRRIAQET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M I+APLA+ + L +LEDLSF+YL P Y +D WL +H+ K +I+ +
Sbjct: 163 MDIYAPLANRLGLYLLKRQLEDLSFKYLRPDIYNQIDHWLDAHQVVEKQIIEKVVSLIQD 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L ++ + V GR K +YS KK+ +E++D++ RV++K
Sbjct: 223 LLASNGL------EGQVYGRIKHKYSIYKKMQSQSLTLDEMHDIMAFRVLVKDI------ 270
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY ++ S WK + R KDYI+ PKANGY+SLH V + G+ +EIQ
Sbjct: 271 -----RDCYAVLGLVHSQWKPVHGRFKDYISMPKANGYQSLHTTV-IGPEGER---IEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRTEEM A +G A+H YK
Sbjct: 322 IRTEEMHRQAEHGVAAHWLYK 342
>gi|94985409|ref|YP_604773.1| (p)ppGpp synthetase I SpoT/RelA [Deinococcus geothermalis DSM
11300]
gi|94555690|gb|ABF45604.1| (p)ppGpp synthetase I, SpoT/RelA [Deinococcus geothermalis DSM
11300]
Length = 766
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/343 (33%), Positives = 177/343 (51%), Gaps = 23/343 (6%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVES-GGVSIQQVRDRIGIGTAHLLHESLRVK 168
+T ++VA +LA L MD + I AGLL VE GV+ + + G ++ +V
Sbjct: 54 ITHPVAVATILARLGMDTDSIMAGLLHDTVEDVDGVTFEVIEREFGPDVRRIVEGETKVS 113
Query: 169 N---NVNLKLQVLD---DETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQ 221
+ + +V D D A LR+ + D +R +++ LA RL MR L + +Q
Sbjct: 114 KLSKQGSQQAEVRDTGRDLQAENLRQMLIAMTDDLRIIVVKLADRLHNMRTLGAMKPEKQ 173
Query: 222 LMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDI 281
I+ E M I APLAH + + +ELEDL+F+YL P +Y ++ + LR+ + LI
Sbjct: 174 QRIARETMDIFAPLAHRLGIGQIKWELEDLAFQYLQPDAYAYLQSRLRTRQEERDALIQQ 233
Query: 282 YKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKP 341
QL + L+ D L + V D+ + GR K +S K+ ++ + E++ D+L +RVI+ P
Sbjct: 234 AVTQLREALEDDLELPEWVSDIDIAGRSKHLWSIHNKMQRENKTLEQIFDLLAIRVILTP 293
Query: 342 -----------SSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLH 390
+R CY T I+ S+W +P R KDYIA PK NGY+SLH
Sbjct: 294 RPLSVPPGTDEKRRERAEETREKRICYHTVSIVHSIWTPLPGRFKDYIAVPKPNGYQSLH 353
Query: 391 MAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGGLT 433
V +S +G+ +E+QIR+ M +A G A+H YK G T
Sbjct: 354 TTV-ISQSGQP---IEVQIRSRRMHEVAEYGVAAHWMYKQGAT 392
>gi|260892286|ref|YP_003238383.1| (p)ppGpp synthetase I SpoT/RelA [Ammonifex degensii KC4]
gi|260864427|gb|ACX51533.1| (p)ppGpp synthetase I, SpoT/RelA [Ammonifex degensii KC4]
Length = 710
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/325 (34%), Positives = 174/325 (53%), Gaps = 25/325 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L+ ++VA +LA+L++D E I AGLL VVE G +++++ G A L+ ++
Sbjct: 46 LSHPVAVARILAELELDTETIVAGLLHDVVEDTGTTLEEIEHEFGAEIAALVDGVTKLSR 105
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+ + +++ A LRK F D+R +++ LA RL +R L YLP +Q I+ E
Sbjct: 106 ---LQFRSQEEQQAENLRKMFVAMAKDVRVVLIKLADRLHNLRTLQYLPPEKQRAIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I APLAH + L +ELEDL+FRYL P Y L + ++ + Y +L+
Sbjct: 163 LEIFAPLAHRLGIYRLKWELEDLAFRYLEPERY----RELAAKVAKTRAAREEYTRELIA 218
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L+ A + + GR K+ YS +K+L+DG+ E+ D G+R +++
Sbjct: 219 ILQKRLEEAGI--KAELMGRPKNLYSIYQKMLRDGKEYSEIYDRTGIRALVETV------ 270
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY ++ +LWK +P R KDYIA PK N Y+SLH V + G+ +E+Q
Sbjct: 271 -----RDCYAVLGVVHTLWKPVPGRFKDYIAMPKENMYQSLHTTV-IGPQGEP---VEVQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLT 433
IRT EM A G A+H YK G T
Sbjct: 322 IRTYEMHRTAEYGIAAHWRYKEGQT 346
>gi|283138927|gb|ADB12530.1| putative GTP pyrophosphokinase RelA [uncultured bacterium 9F08]
Length = 736
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/327 (35%), Positives = 172/327 (52%), Gaps = 26/327 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
LT A++VA ++A L++D E I+A +L VVE G++++QV ++ G AHL+ ++
Sbjct: 61 LTHAMAVADIVAGLRLDHESIAAAILHDVVEDTGITLEQVAEQCGQAVAHLVDGVTKMSY 120
Query: 170 ----NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMI 224
+N Q + A +LRK L D+R +++ LA RL MR L +LP +Q I
Sbjct: 121 IGDYQLNGAQQGKEQIKAESLRKLLLAMAEDVRVVMIKLADRLHNMRTLKHLPEEKQRRI 180
Query: 225 SLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKE 284
+ E M I+APLA+ + + +ELEDLSFRYL P +Y V +L + ID
Sbjct: 181 ARETMDIYAPLANRLGIWQIKWELEDLSFRYLDPVTYKQVARFLDERRVDRQGYIDNVIG 240
Query: 285 QLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSN 344
L + L AD ++GR K +S KK+ G ++ DV +RV++ ++
Sbjct: 241 ILEKQLDKAGVKAD------IKGRPKHLFSIWKKMKNKGLSFHDLYDVRAVRVLVDSVAD 294
Query: 345 LVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPL 404
CY ++ SLW +P DYIA PK N Y+S+H AV V GKT
Sbjct: 295 -----------CYHVLGVVHSLWPHIPKEFDDYIATPKENNYQSIHTAV-VGPGGKT--- 339
Query: 405 MEIQIRTEEMDMLAVNGTASHAFYKGG 431
+E+QIRT EMD A G A+H YK G
Sbjct: 340 LEVQIRTWEMDKHAELGVAAHWRYKEG 366
>gi|317484827|ref|ZP_07943721.1| RelA/SpoT family protein [Bilophila wadsworthia 3_1_6]
gi|345890061|ref|ZP_08841020.1| hypothetical protein HMPREF0178_03794 [Bilophila sp. 4_1_30]
gi|316923921|gb|EFV45113.1| RelA/SpoT family protein [Bilophila wadsworthia 3_1_6]
gi|345038932|gb|EGW43306.1| hypothetical protein HMPREF0178_03794 [Bilophila sp. 4_1_30]
Length = 738
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 171/321 (53%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L+ L+VA +LA+L DA ++AGLL VE V++++V G A ++ ++
Sbjct: 57 LSHPLAVAEVLAELGFDAHSVAAGLLHDTVEDTKVTLEEVDAEFGEQVADIVDGVTKISM 116
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ +++ A +RK L +DIR I+ LA R+ MR LD+ +++ I+ E
Sbjct: 117 ---MTFDSKEEQQAENIRKMILAMSHDIRVPIVKLADRVHNMRTLDFQKAHKRQRIAQET 173
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M I+ PLA+ + + L ELE LSF+Y+ P Y + WL S++ + LI +L
Sbjct: 174 MDIYVPLANRLGLHRLKLELEGLSFKYIHPDVYAQISDWLESNQVVERQLIAKIIAKLEG 233
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L ++ + +V GR K YS KK+ + ++++D+L RVI+K
Sbjct: 234 ILSSNQI------EGTVWGRIKHIYSIYKKMTEQNLTLDDMHDILAFRVIVKDV------ 281
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY ++ + WK +P R KDYI+ PKANGY+SLH V + G+ +EIQ
Sbjct: 282 -----RDCYAVLGLVHAQWKPVPGRFKDYISMPKANGYQSLHTTV-IGPEGER---IEIQ 332
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRTEEM LA +G ASH YK
Sbjct: 333 IRTEEMHRLAEHGVASHWLYK 353
>gi|94967206|ref|YP_589254.1| (p)ppGpp synthetase SpoT/RelA [Candidatus Koribacter versatilis
Ellin345]
gi|94549256|gb|ABF39180.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Candidatus Koribacter versatilis Ellin345]
Length = 740
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/382 (31%), Positives = 196/382 (51%), Gaps = 40/382 (10%)
Query: 76 NVLSSSSSRLLFKALKLSIP------MLQSLPLSPDSRSPLTKA---------LSVALLL 120
NVLS++ R L ++ + P + ++ S + T+A L V ++L
Sbjct: 11 NVLSATRYRDLLNIVRQNRPKDDIEIVKKAFEFSQKHHAGQTRASGEPYLVHPLEVGIIL 70
Query: 121 ADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDD 180
AD+++D I+AGLL VE V+I++++++ G AH++ ++ + ++
Sbjct: 71 ADMRLDTTAIAAGLLHDSVEDTSVTIEEIQEQFGEQVAHIVEGVTKISR---IDFASREE 127
Query: 181 ETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAV 239
A +RK L D IR +++ LA RL MR L +L + +Q I+ E ++I+AP+AH +
Sbjct: 128 AQAENVRKMVLAMVDDIRVVLIKLADRLHNMRTLQHLSQERQEKIARETLEIYAPIAHRL 187
Query: 240 ATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADL 299
+ ELEDL+F Y+ P Y V+ + S + ++ K + LK ++
Sbjct: 188 GMGRVRGELEDLAFPYVDPIGYKRVEEAVESRRKKGEEFLEQVKGVITAKLKENSI---- 243
Query: 300 VEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTT 359
D V R K YS +KL++ E+V D+ LR+I K + CY+
Sbjct: 244 --DARVDSRIKRLYSINQKLIRQRIDVEQVYDMYALRIITKSVVD-----------CYSI 290
Query: 360 REIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAV 419
II +LW+ +P R KD+IA P+ N Y+SLH V +++NG E+QIRTEEM LA
Sbjct: 291 LGIIHNLWRPVPGRIKDFIAMPRPNFYQSLHTTV-IAENGNP---FEVQIRTEEMHKLAE 346
Query: 420 NGTASHAFYKGGLTNPEEAKRL 441
G A+H YK G + ++ +RL
Sbjct: 347 EGIAAHWKYKDGPISAKDEQRL 368
>gi|221633684|ref|YP_002522910.1| GTP pyrophosphokinase [Thermomicrobium roseum DSM 5159]
gi|221157017|gb|ACM06144.1| GTP pyrophosphokinase [Thermomicrobium roseum DSM 5159]
Length = 720
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 127/342 (37%), Positives = 178/342 (52%), Gaps = 37/342 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L+ L+VAL+LADLQ+D E I+A LL V+E V+I+Q+R+R G A L+ ++
Sbjct: 40 LSHPLAVALILADLQLDQETIAAALLHDVLEDTDVTIEQLRERFGPRVARLVDGVTKLGK 99
Query: 170 ------NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQL 222
N + L+ A +LRK L D+ +++ LA RL MR LD+LP +Q
Sbjct: 100 IRLSPENEPVSLEREKIRQAESLRKMLLAMAEDVGVVLIKLADRLHNMRTLDHLPPEKQR 159
Query: 223 MISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWL--RSHETGSKPLID 280
I+ E M+I+APLA+ + L ELEDL+F+YL P +Y + L R H+
Sbjct: 160 RIARETMEIYAPLANRLGIGQLKAELEDLAFKYLEPQTYETIARALESRGHD-------- 211
Query: 281 IYKEQLLQCL--KTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVI 338
+EQ LQ + + LAD V GR K S +K+ + R +E+ DVLG+RVI
Sbjct: 212 --REQYLQEVIEQVKRALADAGIRAVVTGREKHIASIARKMREKQRNFDEIYDVLGIRVI 269
Query: 339 IKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDN 398
+ +R CY II +W +P + DYIA PK N YRSLH AV +
Sbjct: 270 VDE-----------QRDCYAALAIIHGMWHPIPGQFDDYIANPKENLYRSLHTAV-IGPR 317
Query: 399 GKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKR 440
G +E+QIRT EM A G A+H YK L P+ R
Sbjct: 318 GIP---LEVQIRTHEMHREAEYGIAAHWRYKEQL-KPDSGDR 355
>gi|342218775|ref|ZP_08711379.1| GTP diphosphokinase [Megasphaera sp. UPII 135-E]
gi|341588903|gb|EGS32275.1| GTP diphosphokinase [Megasphaera sp. UPII 135-E]
Length = 737
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/326 (35%), Positives = 171/326 (52%), Gaps = 25/326 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ L+VA +LAD+++DA I+A LL VVE +++++ +R G A L+ ++
Sbjct: 57 IVHPLAVAQILADMKIDATTITASLLHDVVEDTKYTLEEIEERFGKEVAFLVDGVTKLNR 116
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L + +D+ +LRK F DIR +++ LA RL MR L Y+ +Q IS E
Sbjct: 117 ---LDYRTKEDQQLNSLRKMFLAMAKDIRVVVIKLADRLHNMRTLRYMRSDKQKRISQET 173
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I APLAH + + +ELEDLSFRYL P Y + ++ + +++ +
Sbjct: 174 LEIFAPLAHRLGIFNIKWELEDLSFRYLEPDKYYDLVDQMKQKRHAREEIVN----DAIT 229
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L+ LAD + GR K YS KK+ KD R +V D+ +R+I+ +
Sbjct: 230 VLQ--KALADSHISFEINGRPKHLYSIYKKMKKDNRDLSQVYDLYAIRIIVDTVQD---- 283
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY I+ SLWK +P+R KDYIA PK N Y+SLH V + G+ +EIQ
Sbjct: 284 -------CYGVLGIVHSLWKPLPYRFKDYIAMPKPNNYQSLHTTV-IGSQGQP---VEIQ 332
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTN 434
IRT EM +A G A+H YK G N
Sbjct: 333 IRTWEMHHVAEYGVAAHWRYKEGHAN 358
>gi|219115159|ref|XP_002178375.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410110|gb|EEC50040.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 511
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 120/331 (36%), Positives = 171/331 (51%), Gaps = 17/331 (5%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + V+LLL+ L+MDAE + +GLL VE ++ QQV G ++ +V
Sbjct: 38 IVHPVEVSLLLSGLKMDAETVMSGLLHDTVEDTDLTFQQVETLFGHTVRSIVEGETKVSK 97
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L DE A LR+ F D R +I+ LA RL MR L Y+ +Q+ IS E
Sbjct: 98 LPKLAFAEYADEQAENLRQMFVAMTSDYRIIIVKLADRLHNMRTLRYMKSEKQIKISRET 157
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I APLAH + ELED SF YL+P Y ++ LR H+ + ++ ++ L +
Sbjct: 158 LDIFAPLAHRMGIWQFKSELEDTSFMYLYPQEYKRLNRRLRLHQQSFQETLEKAQDILQR 217
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKL-LKDGRIPEEVNDVLGLRVIIKP------ 341
L D+TL V V GR K YS K+ K+ + + + DV+ LRV+I P
Sbjct: 218 QLNLDSTLQQQAYKVEVSGRTKEIYSLWHKMETKNVQNLDHIVDVVALRVVISPRDKSVE 277
Query: 342 --SSNLVNTSEVGERACYTTREIIQSL--WKEMPHRTKDYIARPKANGYRSLHMAVDVSD 397
S L N S+ G CY ++Q L + +P R KDYI+ PK NGY+SLH A+ +
Sbjct: 278 ADKSELSNDSDRGVWLCYHALGLVQHLPGFVPVPTRVKDYISFPKPNGYQSLHTALIL-- 335
Query: 398 NGKTRPLMEIQIRTEEMDMLAVNGTASHAFY 428
NG+T +E+QIRT M +A G ASH Y
Sbjct: 336 NGQT---IEVQIRTSMMHQVAEYGMASHWAY 363
>gi|333979510|ref|YP_004517455.1| (p)ppGpp synthetase I SpoT/RelA [Desulfotomaculum kuznetsovii DSM
6115]
gi|333822991|gb|AEG15654.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum kuznetsovii DSM
6115]
Length = 724
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/327 (37%), Positives = 176/327 (53%), Gaps = 26/327 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++VA +LA+LQMD + + AGLL VVE GV++++++ G A L+ ++
Sbjct: 53 ITHPVAVAHILANLQMDLQTLVAGLLHDVVEDTGVTLEEIKTAFGDEVALLVDGVTKLSR 112
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+ + ++ A LRK F DIR +++ LA RL +R L Y +Q I+ E
Sbjct: 113 ---LEYRSKEEHQAENLRKMFLAMAQDIRVILIKLADRLHNLRTLKYHTETKQKEIARET 169
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+APLAH + +L +ELEDLSFRYL P Y + R T K + Y +Q
Sbjct: 170 LEIYAPLAHRLGIYHLKWELEDLSFRYLEPEKYYELAE--RVSRTRRKR--EEYIRTAIQ 225
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L+ A + D +QGR K YS K+ K + E+ DV+ +RVI++
Sbjct: 226 ILRRKLAEAGIFAD--IQGRPKHLYSIYTKMEKQQKDLSEIYDVMAVRVIVESI------ 277
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY + +LWK +P R KDYIA PK+N Y+SLH V V G+ PL EIQ
Sbjct: 278 -----RDCYAVLGTVHTLWKPIPGRFKDYIAMPKSNMYQSLHTTV-VGPQGE--PL-EIQ 328
Query: 409 IRTEEMDMLAVNGTASHAFYK-GGLTN 434
IRT EM A G A+H YK GG T+
Sbjct: 329 IRTREMHRTAEYGIAAHWRYKEGGKTD 355
>gi|218288848|ref|ZP_03493099.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus acidocaldarius
LAA1]
gi|218240937|gb|EED08114.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus acidocaldarius
LAA1]
Length = 725
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/322 (37%), Positives = 168/322 (52%), Gaps = 27/322 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ L+VA +LADL++DA I AGLL VVE VS + G A L+ ++K
Sbjct: 52 ISHPLAVAYILADLRLDAAAIMAGLLHDVVEDTSVSDSAIVQTFGAEVATLVDGVTKLKR 111
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+K +++ A LRK F DIR LI+ LA RL MR L Y Q+ + E
Sbjct: 112 ---IKFDSREEQQAENLRKMFMAMARDIRVLIIKLADRLHNMRTLKYQSPETQVRKARET 168
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYL-FVDTWLRSHETGSKPLIDIYKEQLL 287
++I APLAH + N + +ELEDLS RYL P Y V+ R + + Y E ++
Sbjct: 169 LEIFAPLAHRLGINTIKWELEDLSLRYLNPQQYYRIVNLMARKRQEREQ-----YIEGVI 223
Query: 288 QCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVN 347
L+ LA+L V GR K YS +K++ + E+ D+ +R+I++ +
Sbjct: 224 AVLRE--KLAELNLKADVSGRAKHIYSIYRKMVTQHKEFNEIYDLFAIRIIVESIKD--- 278
Query: 348 TSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEI 407
CY ++ ++WK MP R KDYIA PKAN Y+SLH V + NG+ PL EI
Sbjct: 279 --------CYGALGVVHTMWKPMPGRFKDYIAMPKANMYQSLHTTV-IGPNGE--PL-EI 326
Query: 408 QIRTEEMDMLAVNGTASHAFYK 429
QIRT EM A G A+H YK
Sbjct: 327 QIRTWEMHQTAEYGIAAHWVYK 348
>gi|384135926|ref|YP_005518640.1| (p)ppGpp synthetase I SpoT/RelA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
gi|339290011|gb|AEJ44121.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
Length = 725
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/322 (37%), Positives = 168/322 (52%), Gaps = 27/322 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ L+VA +LADL++DA I AGLL VVE VS + G A L+ ++K
Sbjct: 52 ISHPLAVAYILADLRLDAAAIMAGLLHDVVEDTSVSDSTIVQTFGAEVATLVDGVTKLKR 111
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+K +++ A LRK F DIR LI+ LA RL MR L Y Q+ + E
Sbjct: 112 ---IKFDSREEQQAENLRKMFMAMARDIRVLIIKLADRLHNMRTLKYQSPETQVRKARET 168
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYL-FVDTWLRSHETGSKPLIDIYKEQLL 287
++I APLAH + N + +ELEDLS RYL P Y V+ R + + Y E ++
Sbjct: 169 LEIFAPLAHRLGINTIKWELEDLSLRYLNPQQYYRIVNLMARKRQEREQ-----YIEGVI 223
Query: 288 QCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVN 347
L+ LA+L V GR K YS +K++ + E+ D+ +R+I++ +
Sbjct: 224 AVLREK--LAELNLKADVSGRAKHIYSIYRKMVTQHKEFNEIYDLFAIRIIVESIKD--- 278
Query: 348 TSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEI 407
CY ++ ++WK MP R KDYIA PKAN Y+SLH V + NG+ PL EI
Sbjct: 279 --------CYGALGVVHTMWKPMPGRFKDYIAMPKANMYQSLHTTV-IGPNGE--PL-EI 326
Query: 408 QIRTEEMDMLAVNGTASHAFYK 429
QIRT EM A G A+H YK
Sbjct: 327 QIRTWEMHQTAEYGIAAHWVYK 348
>gi|258512062|ref|YP_003185496.1| (p)ppGpp synthetase I SpoT/RelA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478788|gb|ACV59107.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 725
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/322 (37%), Positives = 168/322 (52%), Gaps = 27/322 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ L+VA +LADL++DA I AGLL VVE VS + G A L+ ++K
Sbjct: 52 ISHPLAVAYILADLRLDAAAIMAGLLHDVVEDTSVSDSAIVQAFGAEVATLVDGVTKLKR 111
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+K +++ A LRK F DIR LI+ LA RL MR L Y Q+ + E
Sbjct: 112 ---IKFDSREEQQAENLRKMFMAMARDIRVLIIKLADRLHNMRTLKYQSPETQVRKARET 168
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYL-FVDTWLRSHETGSKPLIDIYKEQLL 287
++I APLAH + N + +ELEDLS RYL P Y V+ R + + Y E ++
Sbjct: 169 LEIFAPLAHRLGINTIKWELEDLSLRYLNPQQYYRIVNLMARKRQEREQ-----YIEGVI 223
Query: 288 QCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVN 347
L+ LA+L V GR K YS +K++ + E+ D+ +R+I++ +
Sbjct: 224 AVLRE--KLAELNLKADVSGRAKHIYSIYRKMVTQHKEFNEIYDLFAIRIIVESIKD--- 278
Query: 348 TSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEI 407
CY ++ ++WK MP R KDYIA PKAN Y+SLH V + NG+ PL EI
Sbjct: 279 --------CYGALGVVHTMWKPMPGRFKDYIAMPKANMYQSLHTTV-IGPNGE--PL-EI 326
Query: 408 QIRTEEMDMLAVNGTASHAFYK 429
QIRT EM A G A+H YK
Sbjct: 327 QIRTWEMHQTAEYGIAAHWVYK 348
>gi|303248713|ref|ZP_07334966.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio fructosovorans JJ]
gi|302489878|gb|EFL49806.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio fructosovorans JJ]
Length = 750
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/392 (32%), Positives = 202/392 (51%), Gaps = 33/392 (8%)
Query: 68 FNELTERMNV-LSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMD 126
NE+ ++ + LS + LL KA S + + L+ L VA LLAD+++D
Sbjct: 11 INEILDKTAIYLSEAEQALLTKAYVFS-AAAHAGQVRLSGEPYLSHPLEVAGLLADMRLD 69
Query: 127 AEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAAL 186
A I+AGLL VE ++ +V + G A ++ ++ + + ++ A +
Sbjct: 70 AASIAAGLLHDTVEDTKATVDEVEELFGDDVADIVDGVTKISL---IPFESKEEAQAENI 126
Query: 187 RKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLS 245
RK L DIR +++ LA RL MR L++ Y+Q I+ E M I+APLA+ + + +
Sbjct: 127 RKMILAMANDIRVVLVKLADRLHNMRTLEFQKPYKQARIAQETMDIYAPLANRLGLHRIK 186
Query: 246 FELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSV 305
ELED+SF+YL P Y + T + H T + I+ Q+ + L+ + A +
Sbjct: 187 TELEDISFKYLKPDVYNQIKTGVDRHRTLDESYIERVISQVKELLRPNHIRARIF----- 241
Query: 306 QGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQS 365
GR K +S K+ G ++V+D++ RVI++ N+ R CY ++ S
Sbjct: 242 -GRRKHLWSVFNKMRVQGLTLDQVHDLVAFRVIVE---NI--------RECYAVLGLVHS 289
Query: 366 LWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASH 425
+WK +P R KDYI+ PKAN Y+SLH V V +G+ +EIQIRT EM+ LA G A+H
Sbjct: 290 IWKPVPGRFKDYISMPKANMYQSLHTTV-VGPDGER---IEIQIRTVEMNRLAEEGVAAH 345
Query: 426 AFYK---GGLTNPEEAKR---LKAIMLAAAEL 451
YK G NP++ +R L+ IM EL
Sbjct: 346 WKYKEREKGKFNPKDVERFAWLRQIMDWQREL 377
>gi|257792451|ref|YP_003183057.1| (p)ppGpp synthetase I SpoT/RelA [Eggerthella lenta DSM 2243]
gi|317490319|ref|ZP_07948805.1| RelA/SpoT family protein [Eggerthella sp. 1_3_56FAA]
gi|325833401|ref|ZP_08165850.1| GTP diphosphokinase [Eggerthella sp. HGA1]
gi|257476348|gb|ACV56668.1| (p)ppGpp synthetase I, SpoT/RelA [Eggerthella lenta DSM 2243]
gi|316910609|gb|EFV32232.1| RelA/SpoT family protein [Eggerthella sp. 1_3_56FAA]
gi|325485325|gb|EGC87794.1| GTP diphosphokinase [Eggerthella sp. HGA1]
Length = 802
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 135/403 (33%), Positives = 201/403 (49%), Gaps = 47/403 (11%)
Query: 38 AESSSSSFASSPAPLPSTAGEKMVVKLVGAFNELTERMNV-LSSSSSRLLFKALKLSIPM 96
AE S + A A P T E+ F EL +V LS +L KA + +
Sbjct: 34 AEKSFAPEAKKDALAPKTPEER--------FAELQRLTSVYLSEDDEAMLAKAFRFASEA 85
Query: 97 LQSLPLSPDSRSP-LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGI 155
+ S P + + VA++LADL+MD E + A LL VE V+ QV
Sbjct: 86 HEGQ--CRKSGEPFVAHPVEVAIILADLRMDVETLCAALLHDTVEDTSVTRDQVEAEFNP 143
Query: 156 GTAHLLHESLRVKNNVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLD 214
A L+ ++ ++++ L DE AA +RK F DIR +++ LA RL MR L
Sbjct: 144 QVAQLVEGVTKI---TRIEVESLTDEQAATIRKMFVAMSKDIRVIVIKLADRLHNMRTLG 200
Query: 215 YLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETG 274
L +++ + E ++I+AP+AH + N + +ELEDLSF YL P + + + T
Sbjct: 201 ALREDRRIFKARETLEIYAPIAHRLGINNIKWELEDLSFYYLEPNKFKQISRMV----TE 256
Query: 275 SKPLIDIYKEQLLQCLKTDATLADLVEDVSVQ----GRYKSRYSTMKKLLKDGRIPEEVN 330
S+ + Y +Q++ + L D +E V++Q GR K YS +K+ K G+ E+
Sbjct: 257 SRSEREGYLDQII------SILHDEMEKVNIQAQIMGRPKHLYSIYQKMTKKGKGFSEIY 310
Query: 331 DVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLH 390
D++ +RVI+K + CY+ + +LW MP R KDYIA PK N Y+SLH
Sbjct: 311 DLIAVRVIVKSVKD-----------CYSALGAVHTLWHPMPGRFKDYIAMPKFNMYQSLH 359
Query: 391 MAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFY--KGG 431
V + G RPL E+QIRTE+M + G A+H Y KGG
Sbjct: 360 TTV-IGPAG--RPL-EVQIRTEDMHRQSEYGVAAHWRYKEKGG 398
>gi|383787986|ref|YP_005472554.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3'-pyrophosphohydrolase [Caldisericum exile AZM16c01]
gi|381363622|dbj|BAL80451.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3'-pyrophosphohydrolase [Caldisericum exile AZM16c01]
Length = 682
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/366 (32%), Positives = 191/366 (52%), Gaps = 27/366 (7%)
Query: 68 FNELTERMN-VLSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMD 126
F EL +++ L +LL A K ++ S + L+VA++LA+L++D
Sbjct: 7 FEELKNKVSPYLDGEGMKLLEDAYKFALEK-HSGQTRESGEEYIIHPLNVAIILANLKLD 65
Query: 127 AEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAAL 186
AE +A LL V+E V+++ ++ + G A L++ +++ +K ++ +L
Sbjct: 66 AETYAAALLHDVIEDTNVTLEDIKSQFGETVAFLVNGVTKLRG---IKSVSTEEAHLESL 122
Query: 187 RKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLS 245
RK L D+R +++ LA RL MR L+YLP +Q I+ E M I+ PLAH + +
Sbjct: 123 RKMLLAMAQDVRVVLIKLADRLHNMRTLNYLPSERQKEIAKETMDIYVPLAHRLGIYTMK 182
Query: 246 FELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSV 305
+ELEDLSFRYL P Y + + + ++ E+L LK + ++ +VE
Sbjct: 183 WELEDLSFRYLEPEKYYELARKVAKKREEREAYVNELMEELRNLLK-EHGISGIVE---- 237
Query: 306 QGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQS 365
GR K+ Y +K+++DG+ EE+ D++ LR+I+ CY I+ +
Sbjct: 238 -GRPKNLYGIYRKMIRDGKQFEEIYDIIALRIIVDDIP-----------TCYQVLGIVNN 285
Query: 366 LWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASH 425
+K +P R KDYIA PK N YRSLH V ++ +G+ EIQIRT EM + G A+H
Sbjct: 286 YYKLVPGRIKDYIAMPKPNFYRSLHTTV-ITKSGEP---FEIQIRTREMHEIDEMGIAAH 341
Query: 426 AFYKGG 431
YK G
Sbjct: 342 WKYKEG 347
>gi|147677380|ref|YP_001211595.1| guanosine polyphosphate pyrophosphohydrolases/synthetases
[Pelotomaculum thermopropionicum SI]
gi|146273477|dbj|BAF59226.1| guanosine polyphosphate pyrophosphohydrolases/synthetases
[Pelotomaculum thermopropionicum SI]
Length = 765
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 186/338 (55%), Gaps = 34/338 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ L VA +LA+L++D E + AGLL VVE GV++Q +R++ G+ TA L+ + ++
Sbjct: 82 IVHPLEVAKILAELELDQETLVAGLLHDVVEDTGVTLQDIREQFGVETALLVDGTTKLSR 141
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ + ++ A LRK F DIR +++ LA RL +R L Y P +Q+ I+ E
Sbjct: 142 ---IEYKSKEELQAENLRKMFLAMAKDIRVILIKLADRLHNLRTLKYHPEPKQVEIANET 198
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I APLAH + + +ELEDLSFR+ P Y + + S T K +E+ ++
Sbjct: 199 LEIFAPLAHRLGIYRIKWELEDLSFRFKEPDRYFELVNKIAS--TRDK------REEYIR 250
Query: 289 CLKTDATLADLVEDVS----VQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSN 344
+ + LA +E+V +QGR K YS K+++ + E+ DV+ +R +++
Sbjct: 251 SVIS--ILAGKLEEVGIEAEIQGRPKHFYSIYAKMIEQQKDLNEIFDVMAVRCLVETV-- 306
Query: 345 LVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPL 404
R CY T I+ ++W +P R KDYIA PK+N Y+SLH V + G+
Sbjct: 307 ---------RDCYATLGIVHTMWTPIPGRFKDYIAMPKSNMYQSLHTTV-IGPQGEP--- 353
Query: 405 MEIQIRTEEMDMLAVNGTASHAFYK-GGLTNPEEAKRL 441
+EIQIRT EM A G A+H YK GG ++ E K+L
Sbjct: 354 LEIQIRTREMHRTAEYGIAAHWRYKEGGRSDREFDKKL 391
>gi|452995059|emb|CCQ93294.1| GTP pyrophosphokinase (RelA/SpoT) [Clostridium ultunense Esp]
Length = 723
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/335 (34%), Positives = 172/335 (51%), Gaps = 32/335 (9%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LADL MD ++SA LL VVE ++ QVR G+ A L+ +++
Sbjct: 45 ITHPLAVAGILADLHMDHVILSAALLHDVVEDTHATLDQVRQEFGVEVAELVDGVTKLRR 104
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+K + +++ A RK L D+R +++ LA RL MR L Y Q I+ E
Sbjct: 105 ---IKYKSQEEQQAENHRKMLLAMAKDVRVILIKLADRLHNMRTLKYRSEEDQRRIANET 161
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I AP+AH + + + +ELED+S RY+ P Y + ++ + I+ E++
Sbjct: 162 LEIFAPIAHRLGISTIKWELEDISLRYINPQQYYRIVHLMKKKRAEREKYIEKVMEEI-- 219
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L DL + GR K YS +K+ + E+ D+L +R+I++
Sbjct: 220 ----RVKLEDLGIKCDISGRPKHIYSIYRKMFLQHKEFNEIYDLLAIRIIVE-------- 267
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY ++ +LWK MP R KDYIA PKAN Y+SLH V + G+ PL E+Q
Sbjct: 268 ---NVRDCYAVLGVVHTLWKPMPGRFKDYIAMPKANLYQSLHTTV-IGPEGE--PL-EVQ 320
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKA 443
IRT+EM A G A+H YK E KRLK
Sbjct: 321 IRTQEMHRTAEYGIAAHWAYK-------EGKRLKG 348
>gi|257064877|ref|YP_003144549.1| (p)ppGpp synthetase, RelA/SpoT family [Slackia heliotrinireducens
DSM 20476]
gi|256792530|gb|ACV23200.1| (p)ppGpp synthetase, RelA/SpoT family [Slackia heliotrinireducens
DSM 20476]
Length = 789
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/321 (34%), Positives = 173/321 (53%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VAL+LADL+MD + + A LL VE V+ + + D A+L+ ++
Sbjct: 92 IAHPVEVALILADLRMDVDTLCAALLHDTVEDTDVTHKDLLDTFNESVANLVEGVTKI-- 149
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++++ L DE AA +RK F +DIR +++ LA RL MR L L +++ + E
Sbjct: 150 -TQVEVESLTDEQAATIRKMFVAMSHDIRVIVIKLADRLHNMRTLSALREDRRIFKAHET 208
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+AH + + +ELEDLSF YL P + + + S+ + Y ++++
Sbjct: 209 LEIYAPIAHRLGIGSIKWELEDLSFYYLDPARFKQIAQMVAE----SRAQREAYLSRVIE 264
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L+ D DL + GR K YS +K++ + E+ D++ +R+I++ +
Sbjct: 265 TLRDDVN--DLNIKAHIAGRPKHLYSINQKMINREKGFSEIYDLIAVRIIVESVKD---- 318
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY+ + SLW MP R KDYIA PKANGY+SLH V + G RPL E+Q
Sbjct: 319 -------CYSVLGSVHSLWHPMPGRFKDYIAMPKANGYQSLHTTV-IGPAG--RPL-EVQ 367
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRTEEM L+ G A+H YK
Sbjct: 368 IRTEEMHRLSEYGVAAHWRYK 388
>gi|83590516|ref|YP_430525.1| (p)ppGpp synthetase SpoT/RelA [Moorella thermoacetica ATCC 39073]
gi|83573430|gb|ABC19982.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Moorella
thermoacetica ATCC 39073]
Length = 717
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 119/340 (35%), Positives = 178/340 (52%), Gaps = 37/340 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L VA +LA+LQ+D I+A LL VVE VS+ +++ G A L+ ++
Sbjct: 45 ITHPLQVAAILAELQLDVVTIAAALLHDVVEDTPVSLDTIKELFGEEVALLVDGVTKLSR 104
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+ + +++ A LRK LT DIR +++ LA RL MR L Y P +Q I+ E
Sbjct: 105 ---LEYKTKEEQQAETLRKMFLTMAQDIRVILIKLADRLHNMRTLKYHPPEKQQEIARET 161
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYL----FVDTWLRSHETGSKPLIDIYKE 284
++I APLAH + L +ELED S RYL P Y ++ R E + ++DI ++
Sbjct: 162 LEIFAPLAHRLGIFRLKWELEDQSLRYLEPERYYELVNSINMKRREREEYIRQVVDILRQ 221
Query: 285 QLLQC-LKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSS 343
+L + +K D +QGR K YS K++K G+ E+ D++ +RVI+
Sbjct: 222 KLDEAGIKAD-----------IQGRPKHFYSIYNKMVKQGKELSEIYDLIAVRVIVDTV- 269
Query: 344 NLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRP 403
+ CY ++ ++WK +P R KDY+A PK N Y+SLH V + NG
Sbjct: 270 ----------KECYAVLGVVHAIWKPIPGRFKDYVAMPKPNMYQSLHTTV-IGPNGDP-- 316
Query: 404 LMEIQIRTEEMDMLAVNGTASHAFYK--GGLTNPEEAKRL 441
EIQIRT EM A G A+H YK GG ++ E ++L
Sbjct: 317 -FEIQIRTWEMHRTAEYGIAAHWRYKEGGGTSDREFEQKL 355
>gi|317056335|ref|YP_004104802.1| (p)ppGpp synthetase I SpoT/RelA [Ruminococcus albus 7]
gi|315448604|gb|ADU22168.1| (p)ppGpp synthetase I, SpoT/RelA [Ruminococcus albus 7]
Length = 762
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 113/337 (33%), Positives = 180/337 (53%), Gaps = 25/337 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ ++V +L +L MD + I A LL VVE +++Q+ GI L++ ++
Sbjct: 83 ISHPIAVGYILLELGMDTDTICAALLHDVVEDTDCTLEQLHKMFGIDVTMLVNGVTKLGE 142
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+++ D++ A +RK L DIR +I+ LA RL MR L++ ++ I+ E
Sbjct: 143 ---VEIFTKDEQKAENIRKILLAMSEDIRVIIIKLADRLHNMRTLNFCRDDKRRTIARET 199
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M I+AP+AH + + ELEDLSF YL PF++ ++ + + L++ K+++ +
Sbjct: 200 MNIYAPIAHRLGIRSIKDELEDLSFFYLDPFAHEEIEQMMALRRDSREALVESIKDKIAE 259
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L + A +V GR KS Y KK+ +DG+ +E+ D +RVI+ N VN
Sbjct: 260 RLAKEFDPAP-----TVSGRVKSNYGIYKKVYRDGKDIDEIYDRYAVRVIV----NTVN- 309
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY II ++K +P+R KDYI+ PKAN Y+SLH V G+ E+Q
Sbjct: 310 ------ECYNVLGIIHDMFKPIPNRFKDYISTPKANMYQSLHTTV----IGREGIPFEVQ 359
Query: 409 IRTEEMDMLAVNGTASHAFYKGGL-TNPEEAKRLKAI 444
IRT +M LA G A+H YK G+ +N ++ KRL I
Sbjct: 360 IRTWDMHRLAEYGIAAHWKYKEGVKSNAKDDKRLAWI 396
>gi|423332782|ref|ZP_17310564.1| GTP pyrophosphokinase [Lactobacillus reuteri ATCC 53608]
gi|337727900|emb|CCC02989.1| GTP pyrophosphokinase [Lactobacillus reuteri ATCC 53608]
Length = 745
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 142/480 (29%), Positives = 230/480 (47%), Gaps = 57/480 (11%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L MD E + AG L +VE G ++ +++ G A ++ ++ +
Sbjct: 55 IQVAGILANLHMDPETVCAGYLHDIVEDTGATLDDIKELFGPTIAMIVDGDTKLGK---I 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + ++ AA RK L DIR +I+ LA RL MR L +L +Q IS E ++I+
Sbjct: 112 RYKSNKEQMAATHRKLLLAMSKDIRVMIVKLADRLHNMRTLKHLRPDKQRRISNETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+A + + + +ELEDLS RYL P Y + + S ID + ++ +K
Sbjct: 172 APIADRLGISTIKWELEDLSLRYLNPQQYYRIVHLMNSRRDQRVDYID----ESIKLIKK 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
DL +V + GR K YS +K++ + ++ D+L +R+++
Sbjct: 228 AIADLDLGPNVEIYGRSKHIYSVYRKMVTQHKQFSQIYDLLAVRIVVDSI---------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
R CY I + WK MP R KDYIA PK NGY+SLH + + G RPL E+QIRT
Sbjct: 278 -RDCYAALGAIHTNWKPMPGRFKDYIAMPKTNGYQSLHTTI-IGPEG--RPL-EVQIRTH 332
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNH-KGFEFD- 470
+M +A G A+H YK G TN + + + E+ LR + + +G + D
Sbjct: 333 KMHEIAEYGVAAHWAYKEGKTNGIQQTQDSQKLNVVKEILELRSESQGTDEFMQGIQSDI 392
Query: 471 WRDRVFRLLDKNGD------GRISIEELMEVMEELGAPGEDAR---------------EM 509
+ D+V+ K GD G ++ ++ E+G A+ ++
Sbjct: 393 YTDKVYAFTPK-GDVIEMPKGSGPLDMAYQIHTEVGNHTTGAKVNGRIVPLDYEIKNGDI 451
Query: 510 MQLLDSNSDGSLSSDEFDLF------QKQVEFMRNLEDRD---DEYRTMLDEKLQMAGDS 560
+ +L S+S S D FDL K +F R DR+ +E + +L+ +L+ AG S
Sbjct: 452 VDILTSSSSAGPSRDWFDLVSTRRARNKIRQFFR-AHDREKNIEEGKQLLENELREAGYS 510
>gi|339629624|ref|YP_004721267.1| GTP pyrophosphokinase [Sulfobacillus acidophilus TPY]
gi|379007260|ref|YP_005256711.1| (p)ppGpp synthetase I SpoT/RelA [Sulfobacillus acidophilus DSM
10332]
gi|339287413|gb|AEJ41524.1| GTP pyrophosphokinase [Sulfobacillus acidophilus TPY]
gi|361053522|gb|AEW05039.1| (p)ppGpp synthetase I, SpoT/RelA [Sulfobacillus acidophilus DSM
10332]
Length = 719
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 114/323 (35%), Positives = 175/323 (54%), Gaps = 25/323 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ L+VA +LADL+MD I A LL VVE ++ + R G A L+ ++
Sbjct: 45 IAHPLAVAGILADLKMDTPTIVAALLHDVVEDTAYTLADIESRFGTEVAQLVDGVTKLDR 104
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+++ ++E A LRK F DIR +++ LA RL MR L +LP+ + I+ E
Sbjct: 105 ---LEVRTQEEEQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKHLPQDRVTRIAKET 161
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLAH + + +ELEDL+F+YL P +Y + + + +D ++Q
Sbjct: 162 MEIYAPLAHRLGIFRIKWELEDLAFQYLQPAAYQEMKELVAKKRQEREAAVD----AVIQ 217
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
LK + +V +VS GR K YS +K+ K G+ ++ D++ +RV+++ +
Sbjct: 218 ELKDRLDASGMVSEVS--GRAKHLYSIYQKMHKQGKDFGQIYDLVAVRVLVESVKD---- 271
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY ++ SLWK +P R KDYIA PK+N Y+SLH V + +G+ PL E+Q
Sbjct: 272 -------CYAVLGLVHSLWKPVPGRFKDYIAMPKSNLYQSLHTTV-IGPHGE--PL-EVQ 320
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IRT EM A G A+H YK G
Sbjct: 321 IRTFEMHHTAEYGIAAHWRYKEG 343
>gi|262199001|ref|YP_003270210.1| (p)ppGpp synthetase I SpoT/RelA [Haliangium ochraceum DSM 14365]
gi|262082348|gb|ACY18317.1| (p)ppGpp synthetase I, SpoT/RelA [Haliangium ochraceum DSM 14365]
Length = 728
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 168/329 (51%), Gaps = 37/329 (11%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T LSVA ++ADL++D I A LL VE +I+ + G A L+ ++
Sbjct: 46 VTHPLSVAGIVADLRLDGATICAALLHDAVEDTSATIEDITSMFGKEVAFLVDGVTKLGK 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L ++ A RK L DIR ++L RLD MR LD+LP +Q I+ E
Sbjct: 106 ---LPYTSREERQAENFRKMLLAMARDIRVILLKFCDRLDNMRTLDHLPSEKQERIASET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSY--LFVDTWLRSHETGSKPLID----IY 282
++I+APLAH + ++ ELEDLSF+YL+ Y L D ++ + ++ ++D IY
Sbjct: 163 LQIYAPLAHRIGIQWIKTELEDLSFKYLYREEYDDLAGDV-AKTRKERNRYIVDVERLIY 221
Query: 283 KEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPS 342
KE ++ T GR K +S +K+ + R E++D +G RV+ +
Sbjct: 222 KEMAKNSVRCKVT-----------GRAKHLWSIRQKMQRTKRPYNEIHDAIGFRVVTE-- 268
Query: 343 SNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTR 402
+R CY ++ + W +P R KDYIA PK NGY+SLH AV + G+
Sbjct: 269 ---------NQRGCYEALGVVHAAWTPIPGRFKDYIALPKPNGYQSLHTAV-IGPKGER- 317
Query: 403 PLMEIQIRTEEMDMLAVNGTASHAFYKGG 431
+EIQIRT+EM +A G A+H YK G
Sbjct: 318 --IEIQIRTDEMHAVAEYGIAAHWKYKEG 344
>gi|298529911|ref|ZP_07017313.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfonatronospira thiodismutans
ASO3-1]
gi|298509285|gb|EFI33189.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfonatronospira thiodismutans
ASO3-1]
Length = 720
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 171/325 (52%), Gaps = 33/325 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L+ L V+ +LADL +DA+ I+AGLL VE S+++VRD+ G A ++ ++
Sbjct: 46 LSHPLEVSDMLADLHLDADTIAAGLLHDTVEDTKASLEEVRDQFGEEVARIVKGVTKIGK 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ ++ A +RK L D IR +++ LA RL M+ L++ ++Q ++ E
Sbjct: 106 ---MSFDSKEEAQAENIRKMILAMADDIRVILVKLADRLHNMKTLEHQSSFKQKAVAQET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M I+APLA+ + L +LEDLS RY+ P Y + + + + EQ +Q
Sbjct: 163 MDIYAPLANRLGLYRLKIQLEDLSLRYMKPDVYFQIQEGVNKQK--------VVGEQYIQ 214
Query: 289 CLKTDATLADLVEDVSVQGRYKSR----YSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSN 344
K + +++E S++GR R YS K+++ G ++V D++ RV+++ +
Sbjct: 215 --KVCQNIEEILEQNSIEGRVSGRMKHIYSIYHKMVQQGLSLDQVFDIIAFRVLVQSIKD 272
Query: 345 LVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPL 404
CY ++ S+WK +P R KDYI+ PKAN Y+SLH V D +
Sbjct: 273 -----------CYAVLGLVHSIWKPVPGRFKDYISMPKANMYQSLHTTVIGPDGER---- 317
Query: 405 MEIQIRTEEMDMLAVNGTASHAFYK 429
+EIQIRTEEM +A G ASH YK
Sbjct: 318 IEIQIRTEEMHKMAEFGVASHWRYK 342
>gi|302769634|ref|XP_002968236.1| hypothetical protein SELMODRAFT_89270 [Selaginella moellendorffii]
gi|300163880|gb|EFJ30490.1| hypothetical protein SELMODRAFT_89270 [Selaginella moellendorffii]
Length = 750
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 181/345 (52%), Gaps = 11/345 (3%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVE-SGGVSIQQVRDRIGIGTAHLLHESLRVKNNVN 172
+ V +L +L+MD E I+AGLL VE + V+ +++ + G ++ +V
Sbjct: 45 VEVGRILGELEMDWETIAAGLLHDTVEDTDFVTFEKLEEEFGFNVRRIVEGETKVSKLGK 104
Query: 173 LKLQ----VLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLE 227
++ + D A LR+ F ++R +++ LA RL MR L ++P ++Q I+LE
Sbjct: 105 IQFSDSQAAVQDAQADDLRQMFLAMTEEVRVIVVKLADRLHNMRTLSFMPEHKQRHIALE 164
Query: 228 VMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLL 287
+++ APLA + + + ELE+LSF Y +P Y+ + + H LI K L+
Sbjct: 165 TLQVFAPLARLLGIHKIKSELEELSFMYAYPADYIDMKKKVEKHFKSQSDLILQAKNALV 224
Query: 288 QCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVN 347
+ +++D L+ +++ V++ K YS KK + EE DV +R++++P + ++
Sbjct: 225 KSVQSDQFLSHVIDGVNIFTLCKDLYSIYKK----KKNLEEAGDVAQVRIVLQPKQDSID 280
Query: 348 TSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEI 407
++ CY ++ +LW +P KDYIA PK NGY+SLH V + KT +EI
Sbjct: 281 RLCSAKQVCYHVLGLVHTLWSPVPQTMKDYIATPKPNGYQSLHTKV-IPFGSKTFFPLEI 339
Query: 408 QIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELA 452
QIRT++MD +A G A H LT R ++ L AA+LA
Sbjct: 340 QIRTDKMDKIAQYGIAVHFSGSIALTPAINGSRQQSNCLNAADLA 384
>gi|302389921|ref|YP_003825742.1| (p)ppGpp synthetase I SpoT/RelA [Thermosediminibacter oceani DSM
16646]
gi|302200549|gb|ADL08119.1| (p)ppGpp synthetase I, SpoT/RelA [Thermosediminibacter oceani DSM
16646]
Length = 721
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 121/333 (36%), Positives = 175/333 (52%), Gaps = 33/333 (9%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L VA++LADL++D I+A LL VVE S++ + G A L+ ++ L
Sbjct: 50 LEVAMILADLELDTITIAASLLHDVVEDTNYSLEDIAKNFGSEIALLVDGVTKLSK---L 106
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A LRK F DIR +++ LA RL MR L YLP +Q I++E ++I
Sbjct: 107 EYKTKEEQQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYLPEKKQKEIAVETLEIF 166
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYL-FVDTWL---RSHETGSKPLIDIYKEQLLQ 288
APLAH + + + +ELEDL+FRYL P Y VD R E +I + +E+L
Sbjct: 167 APLAHRLGISKIKWELEDLAFRYLEPNHYYELVDKVAKKRREREEHINNMIALLRERL-- 224
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
T A + +QGR K YS KK+ + + E++ D+ +RVI+
Sbjct: 225 ------TAAGI--KAEIQGRPKHFYSIYKKMKEQNKSFEQIFDLTAVRVIVDTV------ 270
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY ++ +LWK +P R KDYIA PK N Y+SLH V + +G+ PL EIQ
Sbjct: 271 -----RDCYAALGVVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTV-IDSSGE--PL-EIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRL 441
IRT EM A G A+H YK G + K+L
Sbjct: 322 IRTYEMHKTAEYGIAAHWRYKEGNKEDDFDKKL 354
>gi|291543767|emb|CBL16876.1| (p)ppGpp synthetase, RelA/SpoT family [Ruminococcus champanellensis
18P13]
Length = 737
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 115/326 (35%), Positives = 172/326 (52%), Gaps = 35/326 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
LSV+ +L +L MD + I A +L VVE V++++V+ R G A L+ ++ +
Sbjct: 54 LSVSYILLELGMDTDTICAAMLHDVVEDTPVTLEEVKKRFGQDVAMLVDGVTKLNK---I 110
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ +++ A +RK L DIR +I+ L RL MR L Y P Y+Q +LE M I+
Sbjct: 111 PIFSPEEQQAENVRKMLLAMSQDIRVIIIKLCDRLHNMRTLRYRPSYKQRKTALETMNIY 170
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+AH + + ELEDL+FRYL P++Y ++ L + + I+ K++
Sbjct: 171 APIAHRLGIRAVKEELEDLAFRYLDPYAYAEIEHILEIKKEEREAFIESIKKR------- 223
Query: 293 DATLADLVEDV------SVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLV 346
+AD +DV + GR KS Y KK+ + + EEV D +R+I V
Sbjct: 224 ---IADRFKDVEFSAPPQIDGRVKSIYGIYKKIFVNHKSIEEVYDKYAVRII-------V 273
Query: 347 NTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLME 406
NT VGE CY +I +++ +P+R KDYI+ PKAN Y+SLH V G+ E
Sbjct: 274 NT--VGE--CYNVLGLIHDMFRPIPNRFKDYISTPKANMYQSLHTTV----LGREGIPFE 325
Query: 407 IQIRTEEMDMLAVNGTASHAFYKGGL 432
+QIRT EM A G A+H YK G+
Sbjct: 326 VQIRTWEMHATAEYGIAAHWKYKEGV 351
>gi|302788748|ref|XP_002976143.1| hypothetical protein SELMODRAFT_104457 [Selaginella moellendorffii]
gi|300156419|gb|EFJ23048.1| hypothetical protein SELMODRAFT_104457 [Selaginella moellendorffii]
Length = 750
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 181/345 (52%), Gaps = 11/345 (3%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVE-SGGVSIQQVRDRIGIGTAHLLHESLRVKNNVN 172
+ V +L +L+MD E I+AGLL VE + V+ +++ + G ++ +V
Sbjct: 45 VEVGRILGELEMDWETIAAGLLHDTVEDTDFVTFEKLEEEFGFNVRRIVEGETKVSKLGK 104
Query: 173 LKLQ----VLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLE 227
++ + D A LR+ F ++R +++ LA RL MR L ++P ++Q I+LE
Sbjct: 105 IQFSDSQAAVQDAQADDLRQMFLAMTEEVRVIVVKLADRLHNMRTLSFMPEHKQRHIALE 164
Query: 228 VMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLL 287
+++ APLA + + + ELE+LSF Y +P Y+ + + H LI K L+
Sbjct: 165 TLQVFAPLARLLGIHKIKSELEELSFMYAYPADYIDMKKKVEKHFKSQSDLILQAKNALV 224
Query: 288 QCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVN 347
+ +++D L+ +++ V++ K YS KK + EE DV +R++++P + ++
Sbjct: 225 KSVQSDQFLSHVIDGVNIFTLCKDLYSIYKK----KKNLEEAGDVAQVRIVLQPKPDSID 280
Query: 348 TSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEI 407
++ CY ++ +LW +P KDYIA PK NGY+SLH V + KT +EI
Sbjct: 281 RLCSAKQVCYHVLGLVHTLWSPVPQTMKDYIATPKPNGYQSLHTKV-IPFGSKTFFPLEI 339
Query: 408 QIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELA 452
QIRT++MD +A G A H LT R ++ L AA+LA
Sbjct: 340 QIRTDKMDKIAQYGIAVHFSGSIALTPAINGSRQQSNCLNAADLA 384
>gi|337285951|ref|YP_004625424.1| (p)ppGpp synthetase I SpoT/RelA [Thermodesulfatator indicus DSM
15286]
gi|335358779|gb|AEH44460.1| (p)ppGpp synthetase I, SpoT/RelA [Thermodesulfatator indicus DSM
15286]
Length = 727
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 113/324 (34%), Positives = 170/324 (52%), Gaps = 28/324 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L LSVA +LA +++D I+AGLL VE V+I+ ++ G A ++ ++
Sbjct: 51 LAHPLSVAYILARMKLDLPTIAAGLLHDTVEDTDVTIEDIKKHFGPVVAEIVDGVTKI-- 108
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+L + + A RK L D+R +++ LA RL M+ L+++P +++ I+ E
Sbjct: 109 -AHLSARSKVHKQAENFRKMLLAMAEDLRVILVKLADRLHNMKTLEFMPDHKRKRIAQET 167
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+APLA + ++L ELEDLSF YL+P Y + + + ID K+ + +
Sbjct: 168 LDIYAPLASRLGIDWLKQELEDLSFMYLYPEEYKTLREEVEKVVAARQDFIDEIKKVIKE 227
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEE---VNDVLGLRVIIKPSSNL 345
L + A V GR K YS +KL ++ ++ + D++GLRVI+K
Sbjct: 228 KLDEEGIEA------KVLGRRKHLYSIFRKLQRNNLAIDQLYLIYDIIGLRVIVKKV--- 278
Query: 346 VNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLM 405
+ CY II SLWK +P R KDYI PKAN Y+SLH V + G+ M
Sbjct: 279 --------KECYEVLGIIHSLWKPIPGRFKDYINLPKANMYQSLHTTV-IGPGGRQ---M 326
Query: 406 EIQIRTEEMDMLAVNGTASHAFYK 429
EIQIRTEEMD +A G A+H YK
Sbjct: 327 EIQIRTEEMDRVANEGIAAHFLYK 350
>gi|420187166|ref|ZP_14693188.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM039]
gi|394256604|gb|EJE01533.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM039]
Length = 729
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 111/340 (32%), Positives = 181/340 (53%), Gaps = 25/340 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V+D A ++ ++K +
Sbjct: 55 IQVAGILTEMRLDGPTIVAGFLHDVIEDTSYTFEDVKDMFNEEIARIVDGVTKLKK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 112 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I + +K
Sbjct: 172 APLAHRLGINTIKWELEDTALRYIDSVQYFRIVNLMKKKRSEREAYI----TNAINKIKN 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ T +L +++ GR K YS +K++K + +++ D+L +R+I+ N +N
Sbjct: 228 EMTKMNLSGEIN--GRPKHIYSIYRKMIKQKKQFDQIFDLLAIRIIV----NSIND---- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY T ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 278 ---CYATLGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTV-VGPNGD--PL-EIQIRTH 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELA 452
EM +A +G A+H YK G T ++ + + + ELA
Sbjct: 331 EMHKIAEHGVAAHWAYKEGKTVNQKTQDFQNKLNWLKELA 370
>gi|405983984|ref|ZP_11042289.1| RelA/SpoT family protein [Slackia piriformis YIT 12062]
gi|404388799|gb|EJZ83881.1| RelA/SpoT family protein [Slackia piriformis YIT 12062]
Length = 788
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/330 (33%), Positives = 176/330 (53%), Gaps = 25/330 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VAL+LADL+MDA+ + A LL VE ++++V + A L+ ++
Sbjct: 92 IAHPIEVALILADLRMDADTLCAALLHDTVEDTPTTVEEVSELFNPQVAQLVQGVTKI-- 149
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+++ L DE AA +RK F DIR +++ LA RL MR L L +++ + E
Sbjct: 150 -TRIEVGSLTDEQAATIRKMFVAMSKDIRVIVIKLADRLHNMRTLSALKEDRRIFKARET 208
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+AH + + +ELEDLSF YL P + + + S+ + Y +++
Sbjct: 209 LEIYAPIAHRLGIGSIKWELEDLSFYYLDPAKFGQISRMVAE----SRVERERYLADVIE 264
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L + T ++ ++ GR K YS +K+ K G+ E+ D++ +RVI+K +
Sbjct: 265 TLTGELTKVNITGHIA--GRPKHLYSIYQKMTKRGKGFSEIYDLIAVRVIVKTVKD---- 318
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY+ + +LW MP R KDYIA PK N Y+SLH V + +G RPL E+Q
Sbjct: 319 -------CYSVLGAVHALWHPMPGRFKDYIAMPKLNMYQSLHTTV-IGPSG--RPL-EVQ 367
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEA 438
IRTEEM ++ G A+H YK + +EA
Sbjct: 368 IRTEEMHRMSEYGVAAHWRYKEKGSKADEA 397
>gi|418606224|ref|ZP_13169516.1| GTP diphosphokinase [Staphylococcus epidermidis VCU057]
gi|418621259|ref|ZP_13184038.1| GTP diphosphokinase [Staphylococcus epidermidis VCU123]
gi|374409014|gb|EHQ79818.1| GTP diphosphokinase [Staphylococcus epidermidis VCU057]
gi|374829871|gb|EHR93665.1| GTP diphosphokinase [Staphylococcus epidermidis VCU123]
Length = 590
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/340 (32%), Positives = 181/340 (53%), Gaps = 25/340 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V+D A ++ ++K +
Sbjct: 55 IQVAGILTEMRLDGPTIVAGFLHDVIEDTSYTFEDVKDMFNEEIARIVDGVTKLKK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 112 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I + +K
Sbjct: 172 APLAHRLGINTIKWELEDTALRYIDSVQYFRIVNLMKKKRSEREAYIT----NAINKIKN 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ T +L +++ GR K YS +K++K + +++ D+L +R+I+ N +N
Sbjct: 228 EMTKMNLSGEIN--GRPKHIYSIYRKMIKQKKQFDQIFDLLAIRIIV----NSIND---- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY T ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 278 ---CYATLGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTV-VGPNGD--PL-EIQIRTH 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELA 452
EM +A +G A+H YK G T ++ + + + ELA
Sbjct: 331 EMHEIAEHGVAAHWAYKEGKTVNQKTQDFQNKLNWLKELA 370
>gi|299144024|ref|ZP_07037104.1| GTP diphosphokinase [Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298518509|gb|EFI42248.1| GTP diphosphokinase [Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 713
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/325 (33%), Positives = 171/325 (52%), Gaps = 33/325 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+VAL+LAD+ MD I AGLL +E V+ + ++ G+ A L+ ++K L
Sbjct: 48 FNVALILADMNMDTATIIAGLLHDTIEDTDVTYEDIKKEFGVEIADLVEGVTKLKK---L 104
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
Q ++ A +RK L DIR +I+ LA RL MR L+Y+ ++ +LE ++I+
Sbjct: 105 NYQTKQEKQAENIRKMVLAMARDIRVIIVKLADRLHNMRTLEYMTDAKKHEKALETLEIY 164
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWL--RSHETGSKPLIDIYKEQLLQ-- 288
AP+A + + + +ELEDLS RYL P +Y + + R HE +E L+
Sbjct: 165 APIADRLGMSKIKWELEDLSLRYLDPENYYQLVEMVNKRRHE----------REALISKI 214
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L+ + L + + GR K+ YS KK+ G+ +E+ D+ +RV++ +
Sbjct: 215 TLEIEKNLNKIGIHADIHGRPKNFYSIYKKMKIKGKAFDEIYDLSAVRVLVDDIKD---- 270
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY ++ +LWK +P R KDYIA PK N Y+SLH V + +NG+T E+Q
Sbjct: 271 -------CYGVLGVVHTLWKPIPGRFKDYIAMPKPNKYQSLHTTV-IDNNGET---FEVQ 319
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLT 433
IRT EM A G A+H YK G++
Sbjct: 320 IRTFEMHQTAEYGIAAHWKYKAGVS 344
>gi|420177943|ref|ZP_14684277.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM057]
gi|420179188|ref|ZP_14685487.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM053]
gi|394247130|gb|EJD92378.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM057]
gi|394254263|gb|EJD99234.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM053]
Length = 729
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/340 (32%), Positives = 181/340 (53%), Gaps = 25/340 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V+D A ++ ++K +
Sbjct: 55 IQVAGILTEMRLDGPTIVAGFLHDVIEDTSYTFEDVKDMFNEEIARIVDGVTKLKK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 112 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I + +K
Sbjct: 172 APLAHRLGINTIKWELEDTALRYIDSVQYFRIVNLMKKKRSEREAYI----TNAINKIKN 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ T +L +++ GR K YS +K++K + +++ D+L +R+I+ N +N
Sbjct: 228 EMTKMNLSGEIN--GRPKHIYSIYRKMIKQKKQFDQIFDLLAIRIIV----NSIND---- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY T ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 278 ---CYATLGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTV-VGPNGD--PL-EIQIRTH 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELA 452
EM +A +G A+H YK G T ++ + + + ELA
Sbjct: 331 EMHEIAEHGVAAHWAYKEGKTVNQKTQDFQNKLNWLKELA 370
>gi|227364865|ref|ZP_03848912.1| GTP diphosphokinase [Lactobacillus reuteri MM2-3]
gi|325682510|ref|ZP_08162027.1| GTP diphosphokinase [Lactobacillus reuteri MM4-1A]
gi|227070128|gb|EEI08504.1| GTP diphosphokinase [Lactobacillus reuteri MM2-3]
gi|324978349|gb|EGC15299.1| GTP diphosphokinase [Lactobacillus reuteri MM4-1A]
Length = 751
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 142/480 (29%), Positives = 230/480 (47%), Gaps = 57/480 (11%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L MD E + AG L +VE G ++ +++ G A ++ ++ +
Sbjct: 61 IQVAGILANLHMDPETVCAGYLHDIVEDTGATLDDIKELFGPTIAMIVDGDTKLGK---I 117
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + ++ AA RK L DIR +I+ LA RL MR L +L +Q IS E ++I+
Sbjct: 118 RYKSNKEQMAATHRKLLLAMSKDIRVMIVKLADRLHNMRTLKHLRPDKQRRISNETLEIY 177
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+A + + + +ELEDLS RYL P Y + + S ID + ++ +K
Sbjct: 178 APIADRLGISTIKWELEDLSLRYLNPQQYYRIVHLMNSRRDQRVDYID----ESIKLIKK 233
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
DL +V + GR K YS +K++ + ++ D+L +R+++
Sbjct: 234 AIADLDLGPNVEIYGRPKHIYSVYRKMVTQHKQFSQIYDLLAVRIVVDSI---------- 283
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
R CY I + WK MP R KDYIA PK NGY+SLH + + G RPL E+QIRT
Sbjct: 284 -RDCYAALGAIHTNWKPMPGRFKDYIAMPKTNGYQSLHTTI-IGPEG--RPL-EVQIRTH 338
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNH-KGFEFD- 470
+M +A G A+H YK G TN + + + E+ LR + + +G + D
Sbjct: 339 KMHEIAEYGVAAHWAYKEGKTNGIQQTQDSQKLNVVKEILELRSESQGTDEFMQGIQSDI 398
Query: 471 WRDRVFRLLDKNGD------GRISIEELMEVMEELGAPGEDAR---------------EM 509
+ D+V+ K GD G ++ ++ E+G A+ ++
Sbjct: 399 FTDKVYAFTPK-GDVIEMPKGSGPLDMAYQIHTEVGNHTTGAKVNGRIVPLDYEIKNGDI 457
Query: 510 MQLLDSNSDGSLSSDEFDLF------QKQVEFMRNLEDRD---DEYRTMLDEKLQMAGDS 560
+ +L S+S S D FDL K +F R DR+ +E + +L+ +L+ AG S
Sbjct: 458 VDILTSSSSAGPSRDWFDLVSTRRARNKIRQFFR-AHDREKNIEEGKQLLENELREAGYS 516
>gi|27468233|ref|NP_764870.1| GTP pyrophosphokinase [Staphylococcus epidermidis ATCC 12228]
gi|57867129|ref|YP_188772.1| GTP pyrophosphokinase [Staphylococcus epidermidis RP62A]
gi|242242906|ref|ZP_04797351.1| GTP pyrophosphokinase [Staphylococcus epidermidis W23144]
gi|251811038|ref|ZP_04825511.1| GTP pyrophosphokinase [Staphylococcus epidermidis BCM-HMP0060]
gi|282875942|ref|ZP_06284809.1| GTP diphosphokinase [Staphylococcus epidermidis SK135]
gi|293366410|ref|ZP_06613088.1| GTP diphosphokinase [Staphylococcus epidermidis M23864:W2(grey)]
gi|417655951|ref|ZP_12305642.1| GTP diphosphokinase [Staphylococcus epidermidis VCU028]
gi|417659668|ref|ZP_12309268.1| GTP diphosphokinase [Staphylococcus epidermidis VCU045]
gi|417908499|ref|ZP_12552256.1| GTP diphosphokinase [Staphylococcus epidermidis VCU037]
gi|417911252|ref|ZP_12554959.1| GTP diphosphokinase [Staphylococcus epidermidis VCU105]
gi|417912614|ref|ZP_12556303.1| GTP diphosphokinase [Staphylococcus epidermidis VCU109]
gi|418327807|ref|ZP_12938944.1| GTP diphosphokinase [Staphylococcus epidermidis 14.1.R1.SE]
gi|418603642|ref|ZP_13167024.1| GTP diphosphokinase [Staphylococcus epidermidis VCU041]
gi|418609265|ref|ZP_13172424.1| GTP diphosphokinase [Staphylococcus epidermidis VCU065]
gi|418611758|ref|ZP_13174827.1| GTP diphosphokinase [Staphylococcus epidermidis VCU117]
gi|418615702|ref|ZP_13178641.1| GTP diphosphokinase [Staphylococcus epidermidis VCU118]
gi|418616388|ref|ZP_13179313.1| GTP diphosphokinase [Staphylococcus epidermidis VCU120]
gi|418623420|ref|ZP_13186131.1| GTP diphosphokinase [Staphylococcus epidermidis VCU125]
gi|418626110|ref|ZP_13188736.1| GTP diphosphokinase [Staphylococcus epidermidis VCU126]
gi|418628145|ref|ZP_13190702.1| GTP diphosphokinase [Staphylococcus epidermidis VCU127]
gi|418630931|ref|ZP_13193403.1| GTP diphosphokinase [Staphylococcus epidermidis VCU128]
gi|418633468|ref|ZP_13195881.1| GTP diphosphokinase [Staphylococcus epidermidis VCU129]
gi|418664077|ref|ZP_13225573.1| GTP diphosphokinase [Staphylococcus epidermidis VCU081]
gi|419771360|ref|ZP_14297414.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-K]
gi|420163791|ref|ZP_14670525.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM095]
gi|420165616|ref|ZP_14672307.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM088]
gi|420168637|ref|ZP_14675245.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM087]
gi|420170335|ref|ZP_14676896.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM070]
gi|420173158|ref|ZP_14679653.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM067]
gi|420174606|ref|ZP_14681055.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM061]
gi|420184598|ref|ZP_14690707.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM040]
gi|420190242|ref|ZP_14696186.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM037]
gi|420192570|ref|ZP_14698428.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM023]
gi|420196874|ref|ZP_14702608.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM020]
gi|420202331|ref|ZP_14707924.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM018]
gi|420204546|ref|ZP_14710104.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM015]
gi|420206053|ref|ZP_14711563.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM008]
gi|420209134|ref|ZP_14714572.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM003]
gi|420212181|ref|ZP_14717534.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM001]
gi|420214089|ref|ZP_14719369.1| GTP diphosphokinase [Staphylococcus epidermidis NIH05005]
gi|420216238|ref|ZP_14721454.1| GTP diphosphokinase [Staphylococcus epidermidis NIH05001]
gi|420220573|ref|ZP_14725532.1| GTP diphosphokinase [Staphylococcus epidermidis NIH04008]
gi|420221584|ref|ZP_14726512.1| GTP diphosphokinase [Staphylococcus epidermidis NIH08001]
gi|420225825|ref|ZP_14730652.1| GTP diphosphokinase [Staphylococcus epidermidis NIH06004]
gi|420227420|ref|ZP_14732188.1| GTP diphosphokinase [Staphylococcus epidermidis NIH05003]
gi|420229734|ref|ZP_14734438.1| GTP diphosphokinase [Staphylococcus epidermidis NIH04003]
gi|420232145|ref|ZP_14736786.1| GTP diphosphokinase [Staphylococcus epidermidis NIH051668]
gi|421606876|ref|ZP_16048128.1| GTP pyrophosphokinase [Staphylococcus epidermidis AU12-03]
gi|59798397|sp|Q8CS97.1|RELA_STAES RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
I
gi|81674357|sp|Q5HNR8.1|RELA_STAEQ RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
I
gi|27315779|gb|AAO04914.1|AE016748_148 GTP pyrophosphokinase [Staphylococcus epidermidis ATCC 12228]
gi|57637787|gb|AAW54575.1| GTP pyrophosphokinase [Staphylococcus epidermidis RP62A]
gi|242233621|gb|EES35933.1| GTP pyrophosphokinase [Staphylococcus epidermidis W23144]
gi|251805456|gb|EES58113.1| GTP pyrophosphokinase [Staphylococcus epidermidis BCM-HMP0060]
gi|281294967|gb|EFA87494.1| GTP diphosphokinase [Staphylococcus epidermidis SK135]
gi|291319444|gb|EFE59812.1| GTP diphosphokinase [Staphylococcus epidermidis M23864:W2(grey)]
gi|329735305|gb|EGG71597.1| GTP diphosphokinase [Staphylococcus epidermidis VCU045]
gi|329737201|gb|EGG73455.1| GTP diphosphokinase [Staphylococcus epidermidis VCU028]
gi|341653575|gb|EGS77342.1| GTP diphosphokinase [Staphylococcus epidermidis VCU105]
gi|341655860|gb|EGS79583.1| GTP diphosphokinase [Staphylococcus epidermidis VCU037]
gi|341657324|gb|EGS81014.1| GTP diphosphokinase [Staphylococcus epidermidis VCU109]
gi|365232585|gb|EHM73576.1| GTP diphosphokinase [Staphylococcus epidermidis 14.1.R1.SE]
gi|374407151|gb|EHQ78016.1| GTP diphosphokinase [Staphylococcus epidermidis VCU041]
gi|374408270|gb|EHQ79102.1| GTP diphosphokinase [Staphylococcus epidermidis VCU065]
gi|374410877|gb|EHQ81607.1| GTP diphosphokinase [Staphylococcus epidermidis VCU081]
gi|374816752|gb|EHR80951.1| GTP diphosphokinase [Staphylococcus epidermidis VCU118]
gi|374821214|gb|EHR85281.1| GTP diphosphokinase [Staphylococcus epidermidis VCU120]
gi|374821769|gb|EHR85816.1| GTP diphosphokinase [Staphylococcus epidermidis VCU117]
gi|374830622|gb|EHR94388.1| GTP diphosphokinase [Staphylococcus epidermidis VCU125]
gi|374833733|gb|EHR97404.1| GTP diphosphokinase [Staphylococcus epidermidis VCU126]
gi|374836241|gb|EHR99829.1| GTP diphosphokinase [Staphylococcus epidermidis VCU128]
gi|374838528|gb|EHS02068.1| GTP diphosphokinase [Staphylococcus epidermidis VCU127]
gi|374839221|gb|EHS02739.1| GTP diphosphokinase [Staphylococcus epidermidis VCU129]
gi|383361586|gb|EID38956.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-K]
gi|394232917|gb|EJD78528.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM095]
gi|394233346|gb|EJD78954.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM087]
gi|394235417|gb|EJD80989.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM088]
gi|394240336|gb|EJD85760.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM067]
gi|394240673|gb|EJD86096.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM070]
gi|394244837|gb|EJD90169.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM061]
gi|394257249|gb|EJE02171.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM040]
gi|394259133|gb|EJE04003.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM037]
gi|394260743|gb|EJE05547.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM023]
gi|394266848|gb|EJE11466.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM020]
gi|394269739|gb|EJE14269.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM018]
gi|394273556|gb|EJE17987.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM015]
gi|394277892|gb|EJE22209.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM008]
gi|394279362|gb|EJE23670.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM003]
gi|394280021|gb|EJE24312.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM001]
gi|394284011|gb|EJE28172.1| GTP diphosphokinase [Staphylococcus epidermidis NIH05005]
gi|394285926|gb|EJE29992.1| GTP diphosphokinase [Staphylococcus epidermidis NIH04008]
gi|394290379|gb|EJE34240.1| GTP diphosphokinase [Staphylococcus epidermidis NIH08001]
gi|394292328|gb|EJE36087.1| GTP diphosphokinase [Staphylococcus epidermidis NIH05001]
gi|394293259|gb|EJE36982.1| GTP diphosphokinase [Staphylococcus epidermidis NIH06004]
gi|394297044|gb|EJE40656.1| GTP diphosphokinase [Staphylococcus epidermidis NIH05003]
gi|394298913|gb|EJE42471.1| GTP diphosphokinase [Staphylococcus epidermidis NIH04003]
gi|394301468|gb|EJE44924.1| GTP diphosphokinase [Staphylococcus epidermidis NIH051668]
gi|406657456|gb|EKC83843.1| GTP pyrophosphokinase [Staphylococcus epidermidis AU12-03]
Length = 729
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/340 (32%), Positives = 181/340 (53%), Gaps = 25/340 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V+D A ++ ++K +
Sbjct: 55 IQVAGILTEMRLDGPTIVAGFLHDVIEDTSYTFEDVKDMFNEEIARIVDGVTKLKK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 112 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I + +K
Sbjct: 172 APLAHRLGINTIKWELEDTALRYIDSVQYFRIVNLMKKKRSEREAYI----TNAINKIKN 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ T +L +++ GR K YS +K++K + +++ D+L +R+I+ N +N
Sbjct: 228 EMTKMNLSGEIN--GRPKHIYSIYRKMIKQKKQFDQIFDLLAIRIIV----NSIND---- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY T ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 278 ---CYATLGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTV-VGPNGD--PL-EIQIRTH 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELA 452
EM +A +G A+H YK G T ++ + + + ELA
Sbjct: 331 EMHEIAEHGVAAHWAYKEGKTVNQKTQDFQNKLNWLKELA 370
>gi|420183290|ref|ZP_14689423.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM049]
gi|420234790|ref|ZP_14739350.1| GTP diphosphokinase [Staphylococcus epidermidis NIH051475]
gi|394249753|gb|EJD94966.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM049]
gi|394304033|gb|EJE47443.1| GTP diphosphokinase [Staphylococcus epidermidis NIH051475]
Length = 729
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/340 (32%), Positives = 181/340 (53%), Gaps = 25/340 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V+D A ++ ++K +
Sbjct: 55 IQVAGILTEMRLDGPTIVAGFLHDVIEDTSYTFEDVKDMFNEEIARIVDGVTKLKK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 112 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I + +K
Sbjct: 172 APLAHRLGINTIKWELEDTALRYIDSVQYFRIVNLMKKKRSEREAYI----TNAINKIKN 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ T +L +++ GR K YS +K++K + +++ D+L +R+I+ N +N
Sbjct: 228 EMTKMNLSGEIN--GRPKHIYSIYRKMIKQKKQFDQIFDLLAIRIIV----NSIND---- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY T ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 278 ---CYATLGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTV-VGPNGD--PL-EIQIRTH 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELA 452
EM +A +G A+H YK G T ++ + + + ELA
Sbjct: 331 EMHEIAEHGVAAHWAYKEGKTVNQKTQDFQNKLNWLKELA 370
>gi|417647325|ref|ZP_12297167.1| GTP diphosphokinase [Staphylococcus epidermidis VCU144]
gi|329724679|gb|EGG61185.1| GTP diphosphokinase [Staphylococcus epidermidis VCU144]
Length = 729
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/340 (32%), Positives = 181/340 (53%), Gaps = 25/340 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V+D A ++ ++K +
Sbjct: 55 IQVAGILTEMRLDGPTIVAGFLHDVIEDTSYTFEDVKDMFNEEIARIVDGVTKLKK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 112 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I + +K
Sbjct: 172 APLAHRLGINTIKWELEDTALRYIDSVQYFRIVNLMKKKRSEREAYI----TNAINKIKN 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ T +L +++ GR K YS +K++K + +++ D+L +R+I+ N +N
Sbjct: 228 EMTKMNLSGEIN--GRPKHIYSIYRKMIKQKKQFDQIFDLLAIRIIV----NSIND---- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY T ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 278 ---CYATLGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTV-VGPNGD--PL-EIQIRTH 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELA 452
EM +A +G A+H YK G T ++ + + + ELA
Sbjct: 331 EMHEIAEHGVAAHWAYKEGKTVNQKTQDFQNKLNWLKELA 370
>gi|148543952|ref|YP_001271322.1| (p)ppGpp synthetase I SpoT/RelA [Lactobacillus reuteri DSM 20016]
gi|184153347|ref|YP_001841688.1| GTP pyrophosphokinase [Lactobacillus reuteri JCM 1112]
gi|148530986|gb|ABQ82985.1| (p)ppGpp synthetase I, SpoT/RelA [Lactobacillus reuteri DSM 20016]
gi|183224691|dbj|BAG25208.1| GTP pyrophosphokinase [Lactobacillus reuteri JCM 1112]
Length = 745
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 142/480 (29%), Positives = 230/480 (47%), Gaps = 57/480 (11%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L MD E + AG L +VE G ++ +++ G A ++ ++ +
Sbjct: 55 IQVAGILANLHMDPETVCAGYLHDIVEDTGATLDDIKELFGPTIAMIVDGDTKLGK---I 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + ++ AA RK L DIR +I+ LA RL MR L +L +Q IS E ++I+
Sbjct: 112 RYKSNKEQMAATHRKLLLAMSKDIRVMIVKLADRLHNMRTLKHLRPDKQRRISNETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+A + + + +ELEDLS RYL P Y + + S ID + ++ +K
Sbjct: 172 APIADRLGISTIKWELEDLSLRYLNPQQYYRIVHLMNSRRDQRVDYID----ESIKLIKK 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
DL +V + GR K YS +K++ + ++ D+L +R+++
Sbjct: 228 AIADLDLGPNVEIYGRPKHIYSVYRKMVTQHKQFSQIYDLLAVRIVVDSI---------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
R CY I + WK MP R KDYIA PK NGY+SLH + + G RPL E+QIRT
Sbjct: 278 -RDCYAALGAIHTNWKPMPGRFKDYIAMPKTNGYQSLHTTI-IGPEG--RPL-EVQIRTH 332
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNH-KGFEFD- 470
+M +A G A+H YK G TN + + + E+ LR + + +G + D
Sbjct: 333 KMHEIAEYGVAAHWAYKEGKTNGIQQTQDSQKLNVVKEILELRSESQGTDEFMQGIQSDI 392
Query: 471 WRDRVFRLLDKNGD------GRISIEELMEVMEELGAPGEDAR---------------EM 509
+ D+V+ K GD G ++ ++ E+G A+ ++
Sbjct: 393 FTDKVYAFTPK-GDVIEMPKGSGPLDMAYQIHTEVGNHTTGAKVNGRIVPLDYEIKNGDI 451
Query: 510 MQLLDSNSDGSLSSDEFDLF------QKQVEFMRNLEDRD---DEYRTMLDEKLQMAGDS 560
+ +L S+S S D FDL K +F R DR+ +E + +L+ +L+ AG S
Sbjct: 452 VDILTSSSSAGPSRDWFDLVSTRRARNKIRQFFR-AHDREKNIEEGKQLLENELREAGYS 510
>gi|227544928|ref|ZP_03974977.1| GTP diphosphokinase [Lactobacillus reuteri CF48-3A]
gi|338204327|ref|YP_004650472.1| GTP diphosphokinase [Lactobacillus reuteri SD2112]
gi|125625359|gb|ABI26419.2| RelA [Lactobacillus reuteri]
gi|227185095|gb|EEI65166.1| GTP diphosphokinase [Lactobacillus reuteri CF48-3A]
gi|336449567|gb|AEI58182.1| GTP diphosphokinase [Lactobacillus reuteri SD2112]
Length = 745
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 142/480 (29%), Positives = 230/480 (47%), Gaps = 57/480 (11%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L MD E + AG L +VE G ++ +++ G A ++ ++ +
Sbjct: 55 IQVAGILANLHMDPETVCAGYLHDIVEDTGATLDDIKELFGSTIAMIVDGDTKLGK---I 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + ++ AA RK L DIR +I+ LA RL MR L +L +Q IS E ++I+
Sbjct: 112 RYKSNKEQMAATHRKLLLAMSKDIRVMIVKLADRLHNMRTLKHLRPDKQRRISNETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+A + + + +ELEDLS RYL P Y + + S ID + ++ +K
Sbjct: 172 APIADRLGISTIKWELEDLSLRYLNPQQYYRIVHLMNSRRDQRVDYID----ESIKLIKK 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
DL +V + GR K YS +K++ + ++ D+L +R+++
Sbjct: 228 AIADLDLGPNVEIYGRPKHIYSVYRKMVTQHKQFSQIYDLLAVRIVVDSI---------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
R CY I + WK MP R KDYIA PK NGY+SLH + + G RPL E+QIRT
Sbjct: 278 -RDCYAALGAIHTNWKPMPGRFKDYIAMPKTNGYQSLHTTI-IGPEG--RPL-EVQIRTH 332
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNH-KGFEFD- 470
+M +A G A+H YK G TN + + + E+ LR + + +G + D
Sbjct: 333 KMHEIAEYGVAAHWAYKEGKTNGIQQTQDSQKLNVVKEILELRSESQGTDEFMQGIQSDI 392
Query: 471 WRDRVFRLLDKNGD------GRISIEELMEVMEELGAPGEDAR---------------EM 509
+ D+V+ K GD G ++ ++ E+G A+ ++
Sbjct: 393 FTDKVYAFTPK-GDVIEMPKGSGPLDMAYQIHTEVGNHTTGAKVNGRIVPLDYEIKNGDI 451
Query: 510 MQLLDSNSDGSLSSDEFDLF------QKQVEFMRNLEDRD---DEYRTMLDEKLQMAGDS 560
+ +L S+S S D FDL K +F R DR+ +E + +L+ +L+ AG S
Sbjct: 452 VDILTSSSSAGPSRDWFDLVSTRRARNKIRQFFR-AHDREKNIEEGKQLLENELREAGYS 510
>gi|194467765|ref|ZP_03073751.1| (p)ppGpp synthetase I, SpoT/RelA [Lactobacillus reuteri 100-23]
gi|194452618|gb|EDX41516.1| (p)ppGpp synthetase I, SpoT/RelA [Lactobacillus reuteri 100-23]
Length = 745
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 142/480 (29%), Positives = 230/480 (47%), Gaps = 57/480 (11%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L MD E + AG L +VE G ++ +++ G A ++ ++ +
Sbjct: 55 IQVAGILANLHMDPETVCAGYLHDIVEDTGATLDDIKELFGPTIAMIVDGDTKLGK---I 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + ++ AA RK L DIR +I+ LA RL MR L +L +Q IS E ++I+
Sbjct: 112 RYKSNKEQMAATHRKLLLAMSKDIRVMIVKLADRLHNMRTLKHLRPDKQRRISNETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+A + + + +ELEDLS RYL P Y + + S ID + ++ +K
Sbjct: 172 APIADRLGISTIKWELEDLSLRYLNPQQYYRIVHLMNSRRDQRVDYID----ESIKLIKK 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
DL +V + GR K YS +K++ + ++ D+L +R+++
Sbjct: 228 AIADLDLGPNVEIYGRPKHIYSVYRKMVTQHKQFSQIYDLLAVRIVVDSI---------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
R CY I + WK MP R KDYIA PK NGY+SLH + + G RPL E+QIRT
Sbjct: 278 -RDCYAALGAIHTNWKPMPGRFKDYIAMPKTNGYQSLHTTI-IGPEG--RPL-EVQIRTH 332
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNH-KGFEFD- 470
+M +A G A+H YK G TN + + + E+ LR + + +G + D
Sbjct: 333 KMHEIAEYGVAAHWAYKEGKTNGIQQTQDSQKLNVVKEILELRSESQGTDEFMQGIQSDI 392
Query: 471 WRDRVFRLLDKNGD------GRISIEELMEVMEELGAPGEDAR---------------EM 509
+ D+V+ K GD G ++ ++ E+G A+ ++
Sbjct: 393 FADKVYAFTPK-GDVIEMPKGSGPLDMAYQIHTEVGNHTTGAKVNGRIVPLDYEIKNGDI 451
Query: 510 MQLLDSNSDGSLSSDEFDLF------QKQVEFMRNLEDRD---DEYRTMLDEKLQMAGDS 560
+ +L S+S S D FDL K +F R DR+ +E + +L+ +L+ AG S
Sbjct: 452 VDILTSSSSAGPSRDWFDLVSTRRARNKIRQFFR-AHDREKNIEEGKQLLENELREAGYS 510
>gi|352684036|ref|YP_004896020.1| GTP pyrophosphokinase [Acidaminococcus intestini RyC-MR95]
gi|350278690|gb|AEQ21880.1| GTP pyrophosphokinase [Acidaminococcus intestini RyC-MR95]
Length = 740
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/338 (35%), Positives = 177/338 (52%), Gaps = 43/338 (12%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L VA +LA L MD ++A L VVE V++ Q+ D G+ A L+ ++
Sbjct: 57 LGVASILAQLHMDDTTLAAAFLHDVVEDTDVTLDQLTDIFGLEVAGLVDGVTKLG----- 111
Query: 174 KLQVL--DDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMK 230
K++ + +++ RK F DIR +++ LA RL MR + Y+P +Q IS E ++
Sbjct: 112 KIEYISREEQQVENYRKMFLAMAKDIRVVLIKLADRLHNMRTMKYMPPNKQKRISSETLE 171
Query: 231 IHAPLAHAVATNYLSFELEDLSFRYLFPFSY--LFVDTWLRSHETGSKPLIDIYKEQLLQ 288
I+APLAH + + +ELEDLSFRY+ P Y L ++ HE +E ++Q
Sbjct: 172 IYAPLAHRLGIYAIKWELEDLSFRYMEPQHYYELVEQVKVKRHE----------REAMVQ 221
Query: 289 CLKTDATLADLVED----VSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSN 344
+ L+ L D +QGR KS YS KK+ KD + E+ D+L +RV++ +
Sbjct: 222 --EAMDELSHLCSDSGIKCEIQGRPKSFYSIYKKMQKDNKSINEIYDLLAVRVLVDSVKD 279
Query: 345 LVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPL 404
CY I+ W+ +P R KDYIA PK+NGY+SLH V VS +G+ PL
Sbjct: 280 -----------CYGVLGIVHGKWRPIPGRFKDYIAVPKSNGYQSLHTTV-VSSSGQ--PL 325
Query: 405 MEIQIRTEEMDMLAVNGTASHAFYK--GGLTNPEEAKR 440
EIQIRT EM ++ G A+H YK GG P + +
Sbjct: 326 -EIQIRTFEMHRISEYGVAAHWRYKESGGSNMPSSSDK 362
>gi|332799394|ref|YP_004460893.1| (p)ppGpp synthetase I SpoT/RelA [Tepidanaerobacter acetatoxydans
Re1]
gi|332697129|gb|AEE91586.1| (p)ppGpp synthetase I, SpoT/RelA [Tepidanaerobacter acetatoxydans
Re1]
Length = 721
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/333 (36%), Positives = 173/333 (51%), Gaps = 33/333 (9%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ L VA++LADL++D I+AGLL VVE +I+ + G A L+ ++
Sbjct: 45 ISHPLGVAMILADLELDIPTIAAGLLHDVVEDTDYTIEDIEKIFGSEIAILVDGVTKLGK 104
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+ + +++ A LRK F DIR +++ LA RL MR L +P +Q ++E
Sbjct: 105 ---LEFKTKEEQQAENLRKMFFAMAKDIRIILIKLADRLHNMRTLKSMPEEKQREKAMET 161
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYL----FVDTWLRSHETGSKPLIDIYKE 284
+ I APLAH + + + +ELEDL+FRYL P Y V + E +IDI E
Sbjct: 162 IDIFAPLAHRLGISKIKWELEDLAFRYLEPEHYYDLVEKVAKKRQERENHINKMIDILNE 221
Query: 285 QLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSN 344
+LL AT + +QGR K YS KK+ + E++ D+ +RVI
Sbjct: 222 RLL------ATGI----NAEIQGRPKHFYSIYKKMKDQNKTFEQIYDLTAVRVI------ 265
Query: 345 LVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPL 404
VNT + CY ++ +LWK +P R KDYIA PK N Y+SLH V + +G PL
Sbjct: 266 -VNTV----KDCYGALGVVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTV-IDSSGD--PL 317
Query: 405 MEIQIRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
EIQIRT EM A G A+H YK G N E
Sbjct: 318 -EIQIRTYEMHKTAEYGIAAHWRYKEGDKNSNE 349
>gi|227824350|ref|ZP_03989182.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|226904849|gb|EEH90767.1| conserved hypothetical protein [Acidaminococcus sp. D21]
Length = 725
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/338 (35%), Positives = 177/338 (52%), Gaps = 43/338 (12%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L VA +LA L MD ++A L VVE V++ Q+ D G+ A L+ ++
Sbjct: 42 LGVASILAQLHMDDTTLAAAFLHDVVEDTDVTLDQLTDIFGLEVAGLVDGVTKLG----- 96
Query: 174 KLQVL--DDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMK 230
K++ + +++ RK F DIR +++ LA RL MR + Y+P +Q IS E ++
Sbjct: 97 KIEYISREEQQVENYRKMFLAMAKDIRVVLIKLADRLHNMRTMKYMPPNKQKRISSETLE 156
Query: 231 IHAPLAHAVATNYLSFELEDLSFRYLFPFSY--LFVDTWLRSHETGSKPLIDIYKEQLLQ 288
I+APLAH + + +ELEDLSFRY+ P Y L ++ HE +E ++Q
Sbjct: 157 IYAPLAHRLGIYAIKWELEDLSFRYMEPQHYYELVEQVKVKRHE----------REAMVQ 206
Query: 289 CLKTDATLADLVED----VSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSN 344
+ L+ L D +QGR KS YS KK+ KD + E+ D+L +RV++ +
Sbjct: 207 --EAMDELSHLCSDSGIKCEIQGRPKSFYSIYKKMQKDNKSINEIYDLLAVRVLVDSVKD 264
Query: 345 LVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPL 404
CY I+ W+ +P R KDYIA PK+NGY+SLH V VS +G+ PL
Sbjct: 265 -----------CYGVLGIVHGKWRPIPGRFKDYIAVPKSNGYQSLHTTV-VSSSGQ--PL 310
Query: 405 MEIQIRTEEMDMLAVNGTASHAFYK--GGLTNPEEAKR 440
EIQIRT EM ++ G A+H YK GG P + +
Sbjct: 311 -EIQIRTFEMHRISEYGVAAHWRYKESGGSNMPSSSDK 347
>gi|438002543|ref|YP_007272286.1| GTP pyrophosphokinase [Tepidanaerobacter acetatoxydans Re1]
gi|432179337|emb|CCP26310.1| GTP pyrophosphokinase [Tepidanaerobacter acetatoxydans Re1]
Length = 716
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/333 (36%), Positives = 173/333 (51%), Gaps = 33/333 (9%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ L VA++LADL++D I+AGLL VVE +I+ + G A L+ ++
Sbjct: 40 ISHPLGVAMILADLELDIPTIAAGLLHDVVEDTDYTIEDIEKIFGSEIAILVDGVTKLGK 99
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+ + +++ A LRK F DIR +++ LA RL MR L +P +Q ++E
Sbjct: 100 ---LEFKTKEEQQAENLRKMFFAMAKDIRIILIKLADRLHNMRTLKSMPEEKQREKAMET 156
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYL----FVDTWLRSHETGSKPLIDIYKE 284
+ I APLAH + + + +ELEDL+FRYL P Y V + E +IDI E
Sbjct: 157 IDIFAPLAHRLGISKIKWELEDLAFRYLEPEHYYDLVEKVAKKRQERENHINKMIDILNE 216
Query: 285 QLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSN 344
+LL AT + +QGR K YS KK+ + E++ D+ +RVI
Sbjct: 217 RLL------ATGI----NAEIQGRPKHFYSIYKKMKDQNKTFEQIYDLTAVRVI------ 260
Query: 345 LVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPL 404
VNT + CY ++ +LWK +P R KDYIA PK N Y+SLH V + +G PL
Sbjct: 261 -VNTV----KDCYGALGVVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTV-IDSSGD--PL 312
Query: 405 MEIQIRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
EIQIRT EM A G A+H YK G N E
Sbjct: 313 -EIQIRTYEMHKTAEYGIAAHWRYKEGDKNSNE 344
>gi|325679342|ref|ZP_08158927.1| GTP diphosphokinase [Ruminococcus albus 8]
gi|324108939|gb|EGC03170.1| GTP diphosphokinase [Ruminococcus albus 8]
Length = 763
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/337 (33%), Positives = 182/337 (54%), Gaps = 25/337 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ ++VA +L +L MD + + A LL VVE +++Q+ + GI L++ ++
Sbjct: 83 ISHPIAVAYILLELGMDTDTVCAALLHDVVEDTDCTLEQLHKKFGIDVTMLVNGVTKLGA 142
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+++ D++ A +RK L DIR +I+ LA RL MR L++ ++ I+ E
Sbjct: 143 ---VEIFTKDEQKAENIRKILLAMSEDIRVIIIKLADRLHNMRTLNFCRDDKRRTIARET 199
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M I+AP+AH + + ELEDLSF YL PF++ ++ + + L++ K+++ +
Sbjct: 200 MNIYAPIAHRLGIRSIKDELEDLSFFYLDPFAHEEIEQQMAMRRDSREALVESIKDKIAE 259
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L + A +V GR KS Y KK+ +DG+ +E+ D +RVI+ N VN
Sbjct: 260 RLAKEFDPAP-----NVSGRVKSIYGIYKKVYRDGKDIDEIYDRYAVRVIV----NTVNE 310
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY II ++K +P+R KDYI+ PKAN Y+SLH V G+ E+Q
Sbjct: 311 -------CYNVLGIIHDMFKPIPNRFKDYISTPKANMYQSLHTTV----IGREGIPFEVQ 359
Query: 409 IRTEEMDMLAVNGTASHAFYKGGL-TNPEEAKRLKAI 444
IRT +M LA G A+H YK G+ ++ ++ KRL I
Sbjct: 360 IRTWDMHRLAEFGIAAHWKYKEGVKSSAKDDKRLAWI 396
>gi|336114504|ref|YP_004569271.1| (p)ppGpp synthetase I SpoT/RelA [Bacillus coagulans 2-6]
gi|335367934|gb|AEH53885.1| (p)ppGpp synthetase I, SpoT/RelA [Bacillus coagulans 2-6]
Length = 723
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 169/323 (52%), Gaps = 29/323 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL+MD ++AG L VVE V++ ++R+ A L+ ++ +
Sbjct: 49 IQVAGILADLEMDPSTVAAGFLHDVVEDTDVTLDELREEFNDEVAMLVDGVTKLGK---I 105
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP +Q I+ E ++I
Sbjct: 106 KYKSHEEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPPEKQRRIANETLEIF 165
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCL-- 290
APLAH + + + +ELED S RYL P Y + ++ +EQ LQ +
Sbjct: 166 APLAHRLGISAIKWELEDTSLRYLNPQQYYRIVNLMKRKRAE--------REQYLQNVIE 217
Query: 291 KTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSE 350
+ LAD+ + GR K YS +K+++ + E+ D+L +R+I+K +
Sbjct: 218 EVKERLADIRIKSEISGRPKHIYSIYRKMVQQHKQFNEIYDLLAVRIIVKSIKD------ 271
Query: 351 VGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIR 410
CY +I + WK MP R KDYIA PK N Y+SLH V + G+ PL E+QIR
Sbjct: 272 -----CYAVLGVIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGE--PL-EVQIR 322
Query: 411 TEEMDMLAVNGTASHAFYKGGLT 433
T EM +A G A+H YK G T
Sbjct: 323 TFEMHRIAEYGVAAHWAYKEGKT 345
>gi|416125363|ref|ZP_11595961.1| GTP pyrophosphokinase [Staphylococcus epidermidis FRI909]
gi|319400960|gb|EFV89179.1| GTP pyrophosphokinase [Staphylococcus epidermidis FRI909]
Length = 729
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/340 (32%), Positives = 179/340 (52%), Gaps = 25/340 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++ +D I AG L V+E + + V+D A ++ ++K +
Sbjct: 55 IQVAGILTEMHLDGPTIVAGFLHDVIEDTSYTFEDVKDMFNEEIARIVDGVTKLKK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 112 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I + +K
Sbjct: 172 APLAHRLGINTIKWELEDTALRYIDSVQYFRIVNLMKKKRSERESYI----TNAINKIKN 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ T L +++ GR K YS +K++K + +++ D+L +R+I+ N +N
Sbjct: 228 EMTKMSLSGEIN--GRPKHIYSIYRKMIKQKKQFDQIFDLLAIRIIV----NSIND---- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY T ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 278 ---CYATLGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTV-VGPNGD--PL-EIQIRTH 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELA 452
EM +A +G A+H YK G T ++ + + + ELA
Sbjct: 331 EMHEIAEHGVAAHWAYKEGKTVNQKTQDFQNKLNWLKELA 370
>gi|206895819|ref|YP_002247226.1| GTP pyrophosphokinase [Coprothermobacter proteolyticus DSM 5265]
gi|206738436|gb|ACI17514.1| GTP pyrophosphokinase [Coprothermobacter proteolyticus DSM 5265]
Length = 658
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/335 (35%), Positives = 174/335 (51%), Gaps = 36/335 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L VAL+LA+L D E I AG+L VVE V+++ V + G A LL + L
Sbjct: 5 LRVALILAELYADQESIIAGILHDVVEDTPVTLRDVEENFGTEVA-LLVDGL-------T 56
Query: 174 KLQVLDDETAAA------LRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISL 226
KL+ L T LRK L+ D R +I+ LA RL MR + YLP +Q ++
Sbjct: 57 KLRKLPKGTGWEGAQKENLRKLFLSAAQDPRVVIVKLADRLHNMRTIQYLPADKQKRVAK 116
Query: 227 EVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQL 286
E + I+APLAH + + +ELEDL+F+ L+P Y ++ T + G + +I+ + ++
Sbjct: 117 ETLDIYAPLAHRLGVYRIRWELEDLAFKTLYPEQYEYISTLVNQKLRGQREVIEEARTKV 176
Query: 287 LQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLV 346
L+ A V+GR K YS K+L + +E+ D++GLR+I+
Sbjct: 177 EDMLRARGMEA------KVEGRMKHLYSVYTKMLTQNKTIDEIFDLMGLRIIL------- 223
Query: 347 NTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLME 406
NT E CY T ++ ++W +P R KDYIA PK N Y+SLH V K PL E
Sbjct: 224 NTEE----ECYVTLGLVHAVWPPIPGRLKDYIALPKPNFYQSLHTTV---IGPKGLPL-E 275
Query: 407 IQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRL 441
+QIRT M +A G A+H YK G+T +R+
Sbjct: 276 VQIRTWYMHQVAEYGVAAHWAYKEGVTPKSTLERI 310
>gi|338814984|ref|ZP_08626943.1| (p)ppGpp synthetase I, SpoT/RelA [Acetonema longum DSM 6540]
gi|337273028|gb|EGO61706.1| (p)ppGpp synthetase I, SpoT/RelA [Acetonema longum DSM 6540]
Length = 736
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/322 (34%), Positives = 174/322 (54%), Gaps = 25/322 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADLQ+DA ISA +L VVE ++++ + + G A L+ ++ +
Sbjct: 57 VGVAKILADLQIDATTISAAILHDVVEDTFITLEDIEKKFGKEVAMLVDGVTKLSR---I 113
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ RK L D+R +++ LA RL MR L ++P +Q I+ E ++I+
Sbjct: 114 EYKSKEEQQLENYRKMLLAMAKDLRVVLIKLADRLHNMRTLKFMPEVKQKRIARETLEIY 173
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +E+EDLSFRYL P Y + ++ + +ID + ++ L
Sbjct: 174 APLAHRLGMSNIKWEMEDLSFRYLEPERYYELVEKVKQKRQERQDIID----EAIRILSD 229
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
LAD+ +QGR K YS KK+ KD + E+ D+ +RV+++ +
Sbjct: 230 --RLADMGIKAEIQGRPKHFYSIYKKMQKDHKDINEIYDLSAVRVLVETVKD-------- 279
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I+ +LWK +P R KDYIA PK+N Y+SLH V + G+ PL EIQIRT
Sbjct: 280 ---CYGALGIVHTLWKPIPLRFKDYIAMPKSNMYQSLHTTV-IGTRGQ--PL-EIQIRTW 332
Query: 413 EMDMLAVNGTASHAFYKGGLTN 434
EM + G A+H YK G N
Sbjct: 333 EMHRTSEYGIAAHWRYKEGTKN 354
>gi|347753065|ref|YP_004860630.1| (p)ppGpp synthetase I SpoT/RelA [Bacillus coagulans 36D1]
gi|347585583|gb|AEP01850.1| (p)ppGpp synthetase I, SpoT/RelA [Bacillus coagulans 36D1]
Length = 729
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 169/323 (52%), Gaps = 29/323 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL+MD ++AG L VVE V++ ++R+ A L+ ++ +
Sbjct: 55 IQVAGILADLEMDPSTVAAGFLHDVVEDTDVTLDELREEFNDEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP +Q I+ E ++I
Sbjct: 112 KYKSHEEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPPEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCL-- 290
APLAH + + + +ELED S RYL P Y + ++ +EQ LQ +
Sbjct: 172 APLAHRLGISAIKWELEDTSLRYLNPQQYYRIVNLMKRKRAE--------REQYLQNVIE 223
Query: 291 KTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSE 350
+ LAD+ + GR K YS +K+++ + E+ D+L +R+I+K +
Sbjct: 224 EVKERLADIHIKSEISGRPKHIYSIYRKMVQQHKQFNEIYDLLAVRIIVKSIKD------ 277
Query: 351 VGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIR 410
CY +I + WK MP R KDYIA PK N Y+SLH V + G+ PL E+QIR
Sbjct: 278 -----CYAVLGVIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGE--PL-EVQIR 328
Query: 411 TEEMDMLAVNGTASHAFYKGGLT 433
T EM +A G A+H YK G T
Sbjct: 329 TFEMHRIAEYGVAAHWAYKEGKT 351
>gi|333371965|ref|ZP_08463903.1| GTP diphosphokinase [Desmospora sp. 8437]
gi|332975146|gb|EGK12048.1| GTP diphosphokinase [Desmospora sp. 8437]
Length = 737
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 168/319 (52%), Gaps = 24/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
++VA +LA+LQMDA + + +L VVE G +++ V G A ++ ++K +
Sbjct: 70 VAVAGILAELQMDATTLISAILHDVVEDTGATLETVEAEFGETVAQIVDGLTKLKQR--M 127
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + A RK F DIR +++ LA RL MR L YLP ++ I+ E ++I
Sbjct: 128 KYKSTAEHQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKYLPEAKRRRIAKETLEIF 187
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED S R L P Y + ++ + +D +++ ++
Sbjct: 188 APLAHRLGISTIKWELEDSSLRNLNPQQYYRIVNLMKQKRAEREKYLD----EVIATIRE 243
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+L D+S GR K YS +K++KD + E+ D+L +RVI+
Sbjct: 244 RLEGMNLSADIS--GRPKHIYSIYRKMVKDHKQFNEIYDLLAVRVIVDSI---------- 291
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
R CY II ++WK MP R KDYIA PKAN Y+SLH V + G+ +E+QIRT
Sbjct: 292 -RDCYAVLGIIHTIWKPMPGRFKDYIAMPKANMYQSLHTTV-IGPKGEP---IEVQIRTR 346
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 347 EMHRIAEYGIAAHWAYKEG 365
>gi|420198789|ref|ZP_14704475.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM031]
gi|394272970|gb|EJE17413.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM031]
Length = 729
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/340 (32%), Positives = 180/340 (52%), Gaps = 25/340 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V+D A ++ ++K +
Sbjct: 55 IQVAGILTEMRLDGPTIVAGFLHDVIEDTSYTFEDVKDMFNEEIARIVDGVTKLKK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 112 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I + +K
Sbjct: 172 APLAHRLGINTIKWELEDTALRYIDSVQYFRIVNLMKKKRSERESYI----TNAINKIKN 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ T L +++ GR K YS +K++K + +++ D+L +R+I+ N +N
Sbjct: 228 EMTKMSLSGEIN--GRPKHIYSIYRKMIKQKKQFDQIFDLLAIRIIV----NSIND---- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY T ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 278 ---CYATLGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTV-VGPNGD--PL-EIQIRTH 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELA 452
EM +A +G A+H YK G T ++ + + + ELA
Sbjct: 331 EMHEIAEHGVAAHWAYKEGKTVNQKTQDFQNKLNWLKELA 370
>gi|346312329|ref|ZP_08854317.1| hypothetical protein HMPREF9452_02186 [Collinsella tanakaei YIT
12063]
gi|345898623|gb|EGX68496.1| hypothetical protein HMPREF9452_02186 [Collinsella tanakaei YIT
12063]
Length = 804
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/333 (36%), Positives = 177/333 (53%), Gaps = 28/333 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA++LA+L+MD +V+ A LL VE S+ V D G A L+ V N+
Sbjct: 99 VEVAIILAELKMDCDVVCAALLHDTVEDTQTSLADVTDLFGATVAELVDG---VTKLTNI 155
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
++ +D++ A LRK F DIR +I+ LA RL MR L L ++L + E M ++
Sbjct: 156 EVDSMDEKQALNLRKMFLAMSRDIRVVIVKLADRLHNMRTLAALREDRRLFKARETMDVY 215
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + + +ELEDLSF YL P +Y + + + S+ + + Y + ++ L T
Sbjct: 216 APLADRLGISSIKWELEDLSFFYLEPEAYQRIARMV----SESREVRERYLTETIKTL-T 270
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
D ++D ++GR K +S +K+ + G+ E+ D++ LRVI T VG
Sbjct: 271 DELKRVGLKDFQIKGRSKHYWSIYQKMKRKGKEFSEIYDLVALRVI---------TQTVG 321
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY+ + SLW MP R KDYIA PK N Y+SLH V G T +EIQIRT
Sbjct: 322 D--CYSALGAVHSLWHPMPGRFKDYIAMPKLNNYQSLHTTV----IGPTARPLEIQIRTF 375
Query: 413 EMDMLAVNGTASHAFYK--GG--LTNPEEAKRL 441
EM A G A+H YK GG T +A+RL
Sbjct: 376 EMHEQAEYGIAAHWLYKRSGGSSATKTSDAQRL 408
>gi|375091649|ref|ZP_09737938.1| RelA/SpoT family protein [Helcococcus kunzii ATCC 51366]
gi|374563171|gb|EHR34493.1| RelA/SpoT family protein [Helcococcus kunzii ATCC 51366]
Length = 719
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 169/319 (52%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ V+++L+ L++D E I AGL+ V+E + +++ G L+ ++KN L
Sbjct: 48 VEVSIILSTLELDDETICAGLMHDVLEDTDFTREEMAQEFGDEITALVDGVTKLKN---L 104
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + ++ ++RK L DIR +I+ LA RL MR L+Y R +Q+ + E ++I+
Sbjct: 105 KYKTKEETQIESIRKMVLAMANDIRVIIIKLADRLHNMRTLEYKDRDKQISTANETLEIY 164
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
PLAH + N + +ELEDL RY+ P SY V + + + +I E+L+Q L
Sbjct: 165 VPLAHRLGINSIKWELEDLCLRYIDPISYYSVAQQIDQKRSEREKII----EKLMQKLSD 220
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ D+ ++ GR K YS K+ K + + D++ +RVI+K +
Sbjct: 221 ELKKIDI--KFTMTGRPKGIYSIYNKMKKQDTSIDNIFDLIAIRVIVKDIN--------- 269
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I+ +LWK +P R KDYIA PK N Y+SLH V + + G+ + E+QIRTE
Sbjct: 270 --QCYAVLGIVHNLWKPIPGRFKDYIAMPKPNFYQSLHTTV-IGEKGQ---IFEVQIRTE 323
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM A G ASH YK G
Sbjct: 324 EMHKNAEFGIASHWQYKEG 342
>gi|114566344|ref|YP_753498.1| GTP diphosphokinase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114337279|gb|ABI68127.1| GTP diphosphokinase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 734
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/325 (36%), Positives = 167/325 (51%), Gaps = 26/325 (8%)
Query: 116 VALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKL 175
VAL+LAD++MD I A LL V+E VS + G A LL + + ++ K
Sbjct: 51 VALILADIEMDTPTICAALLHDVIEDTPVSYLDILKEFGEEIA-LLVDGVTKLTRIDFKS 109
Query: 176 QVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAP 234
+ +D A LR+ F DIR +I+ LA RL MR L Y +Q +I+ E M+I AP
Sbjct: 110 R--EDAQAENLRRMFIAMARDIRVIIIKLADRLHNMRTLSYHAEAKQKVIARETMEIFAP 167
Query: 235 LAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDA 294
LAH + +ELEDL+F Y+ P Y V L+ + Y L++ +K
Sbjct: 168 LAHRLGIFRFKWELEDLAFYYMEPEMYYEVAKRLKQKRREREN----YVNDLVEQIKVGL 223
Query: 295 TLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGER 354
D+ D ++GR K+ +S KK++K G+ +E+ D + +RV+++ R
Sbjct: 224 HQIDI--DADIKGRPKNIFSIYKKMIKQGKDVDEIYDKIAIRVLVEDV-----------R 270
Query: 355 ACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEM 414
CY II ++WK +P R KDYIA PKAN Y+SLH + G+ E+QIRT EM
Sbjct: 271 DCYGVLGIIHTMWKPLPGRFKDYIATPKANMYQSLHTTL----IGRGGEPFEVQIRTAEM 326
Query: 415 DMLAVNGTASHAFYKGGLTNPEEAK 439
A G A+H YK G NP E K
Sbjct: 327 HRTAEYGIAAHWRYKEGY-NPRERK 350
>gi|395763561|ref|ZP_10444230.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Janthinobacterium lividum PAMC 25724]
Length = 760
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 179/332 (53%), Gaps = 25/332 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ ++VA + AD ++DA+ I A LL V+E V +++ +R G AHL+ + L
Sbjct: 95 ISHPIAVAEICADWKLDAQAIMAALLHDVMEDQDVKKEELIERFGAPVAHLV-DGLSKLE 153
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + Q+ + A RK L D+R +++ LA RL MR LD++ ++ I+ E
Sbjct: 154 KIEFQSQI--EAQAENFRKMLLAMASDVRVILIKLADRLHNMRTLDFMTAAKKRRIASET 211
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+++ P+AH + N + EL+DLSF +L+P Y + +++ + ++ +++++
Sbjct: 212 MEVYVPIAHRLGLNNIYHELQDLSFSHLYPMRYRTLAKAVKAARGNRREVV----KKIME 267
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+K+ ++A+L DV+ GR K+ Y KK+ +V DV G RV++ ++
Sbjct: 268 AVKSTLSMAELEADVT--GREKTLYDIYKKMRSKHLSFSQVLDVYGFRVVVGSFAD---- 321
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY T + SL+K MP + KDYIA K NGY+SLH V G +E Q
Sbjct: 322 -------CYVTLGTLHSLYKPMPGKFKDYIAIRKLNGYQSLHTTV----IGPYGTPVEFQ 370
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAKR 440
IRT+EM A +G A+H YK G +NP + ++
Sbjct: 371 IRTQEMHRTAESGVAAHWLYKSGESNPSDMQQ 402
>gi|435854533|ref|YP_007315852.1| (p)ppGpp synthetase, RelA/SpoT family [Halobacteroides halobius DSM
5150]
gi|433670944|gb|AGB41759.1| (p)ppGpp synthetase, RelA/SpoT family [Halobacteroides halobius DSM
5150]
Length = 722
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/333 (36%), Positives = 174/333 (52%), Gaps = 35/333 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L+ L VA +LA+L++D I+A LL VVE ++ ++ + G LL + N
Sbjct: 45 LSHPLRVAQILAELELDVVSITAALLHDVVEDTEITADEIEEEFG-AEIRLLVNGVTKLN 103
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ K + ++ AA+LRK F DIR +++ LA RL MR L+YL ++ + E
Sbjct: 104 KIDFKTR--EEHQAASLRKMFLAMAEDIRVVLIKLADRLHNMRTLNYLSEEKRKRKANET 161
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+APLAH + + L +ELEDLSFRYL P Y HE +K L E+
Sbjct: 162 LEIYAPLAHRLGMSRLKWELEDLSFRYLEPDKY---------HELANK-LAKNRAEREAY 211
Query: 289 CLKTDATLADLVEDVSVQGRYKSR----YSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSN 344
TL +EDV +QG+ R YS +K++ + +E+ D+ LRVI+
Sbjct: 212 IEDVIDTLEGKLEDVDIQGKIYGRPKHLYSINQKIINKNKSFDEIYDLTALRVIVDSV-- 269
Query: 345 LVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPL 404
+ CY I+ +W MP R KDYIA PK+N Y+SLH V + G+ PL
Sbjct: 270 ---------KECYQVLGILHEIWNPMPGRIKDYIAMPKSNMYQSLHTTV-IGPKGE--PL 317
Query: 405 MEIQIRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
EIQIRT EM A G A+H YK G NPE+
Sbjct: 318 -EIQIRTWEMHRTAEYGIAAHWRYKDG--NPED 347
>gi|417645315|ref|ZP_12295229.1| GTP diphosphokinase [Staphylococcus warneri VCU121]
gi|445059472|ref|YP_007384876.1| GTP pyrophosphokinase [Staphylococcus warneri SG1]
gi|330683916|gb|EGG95684.1| GTP diphosphokinase [Staphylococcus epidermidis VCU121]
gi|443425529|gb|AGC90432.1| GTP pyrophosphokinase [Staphylococcus warneri SG1]
Length = 729
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/388 (30%), Positives = 197/388 (50%), Gaps = 34/388 (8%)
Query: 78 LSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQ 137
LS S + + K+ ++ Q + + + VA +L ++++D I AG L
Sbjct: 20 LSESEYQYVLKSYHIAYEAHQG-QFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHD 78
Query: 138 VVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRK-FCLTYYDI 196
V+E + V++ A ++ ++K +K + +++ A RK F D+
Sbjct: 79 VIEDTAYTFDDVKNMFNEEVARIVDGVTKLKK---VKYRSKEEQQAENHRKLFIAIAKDV 135
Query: 197 RALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYL 256
R +++ LA RL MR L +PR +Q+ IS E ++I+APLAH + N + +ELED + RY+
Sbjct: 136 RVILVKLADRLHNMRTLKAMPREKQIRISKETLEIYAPLAHRLGINTIKWELEDTALRYI 195
Query: 257 FPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTM 316
Y + ++ + + ID + ++T+ ++V +++ GR K YS
Sbjct: 196 DSVQYFRIVNLMKKKRSEREAYID----NAIGQIETEMDKMNIVGEIN--GRPKHIYSIY 249
Query: 317 KKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKD 376
+K++K + +++ D+L +R+I+ N +N CY ++ +LWK MP R KD
Sbjct: 250 RKMMKQKKQFDQIFDLLAIRIIV----NTIND-------CYAILGLVHTLWKPMPGRFKD 298
Query: 377 YIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNPE 436
YIA PK N Y+SLH V V NG PL EIQIRT EM +A +G A+H YK G T E
Sbjct: 299 YIAMPKQNMYQSLHTTV-VGPNGD--PL-EIQIRTYEMHEIAEHGVAAHWAYKEGKTVNE 354
Query: 437 EAKRLKAIMLAAAELAALRLKDIPSTNH 464
+ + + + LKD+ T+H
Sbjct: 355 KTQDFQNKLNW--------LKDLAETDH 374
>gi|217967359|ref|YP_002352865.1| (p)ppGpp synthetase I SpoT/RelA [Dictyoglomus turgidum DSM 6724]
gi|217336458|gb|ACK42251.1| (p)ppGpp synthetase I, SpoT/RelA [Dictyoglomus turgidum DSM 6724]
Length = 727
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/328 (34%), Positives = 169/328 (51%), Gaps = 25/328 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T + VA +L +L M+ V+ AGLL V+E V+ +++ G L+ +++
Sbjct: 47 ITHPVEVAKILMNLGMEETVVIAGLLHDVLEDTNVTKEEIEKEFGKDVLSLVEAITKLEK 106
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L + A LRK F DIR +I+ LA RL M+ L Y +Q I+ E
Sbjct: 107 ---LSFYPTEAYRAQNLRKMFIAMAKDIRVIIIKLADRLHNMQTLQYHEEEKQKRIAKET 163
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+APLAH + + + LEDL+FRYL P Y +V + + I E+ ++
Sbjct: 164 LEIYAPLAHRLGVWDIKWRLEDLAFRYLEPEKYHYVAKKVAETRKEREKFI----EKAIE 219
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+K + A + + V GR K YS +K+L+ G EE+ D+LG+RVI+
Sbjct: 220 IIKEELKKAGI--NAEVTGRAKHLYSIYQKMLRRGIEIEEMYDLLGVRVIVN-------- 269
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
E+ CY II +LWK +P R KDYIA K+N Y+SLH V D +PL E+Q
Sbjct: 270 ---SEKECYEVLGIIHNLWKPVPGRFKDYIANKKSNNYQSLHTTVIAMDG---KPL-EVQ 322
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPE 436
IRT EM +A G A+H YK + P+
Sbjct: 323 IRTWEMHRIAEYGIAAHWLYKEEIKKPD 350
>gi|336178453|ref|YP_004583828.1| (p)ppGpp synthetase I SpoT/RelA [Frankia symbiont of Datisca
glomerata]
gi|334859433|gb|AEH09907.1| (p)ppGpp synthetase I, SpoT/RelA [Frankia symbiont of Datisca
glomerata]
Length = 750
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 117/346 (33%), Positives = 177/346 (51%), Gaps = 39/346 (11%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++VA +LADL MD + A LL V GG++++++RD G A +L +++
Sbjct: 40 ITHPVAVASILADLGMDTPTLCAALLHGTVGQGGMTLERIRDEFGDHVALVLDAVMKLH- 98
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+++V + A +R+ + D RAL++ LA RL MR L +LP ++Q + E
Sbjct: 99 ----RVKVGEAAQAETIRRMVVAMARDPRALVIKLAARLHNMRTLRFLPEHKQERKARET 154
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSY-----LFVDTWLRSHETGSKPLIDIYK 283
++I+APLAH + N L +ELEDL+F L+P Y L D P D Y
Sbjct: 155 LEIYAPLAHRLGMNSLKWELEDLAFATLYPKRYDEIVRLVAD---------RAPSRDTYI 205
Query: 284 EQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSS 343
++ ++ A LA+ V GR K YS +K++ GR ++++D++G+RV++
Sbjct: 206 TAVV--MQVQAHLAEARIKAVVTGRPKHYYSIYQKMVVRGRSFDDIHDLVGIRVLVDSL- 262
Query: 344 NLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRP 403
R CY + I + WK +P R KDYIA PK N Y+SLH V + GK
Sbjct: 263 ----------RDCYASLGTIHANWKPIPGRFKDYIAMPKFNMYQSLHTTV-IGPEGKP-- 309
Query: 404 LMEIQIRTEEMDMLAVNGTASHAFYK--GGLTNPEEAKRLKAIMLA 447
+E+QIRT M A G A+H YK G P R A LA
Sbjct: 310 -VELQIRTHAMHNRAEYGIAAHWKYKEDGVGARPSGETRAGAFGLA 354
>gi|297616954|ref|YP_003702113.1| (p)ppGpp synthetase I SpoT/RelA [Syntrophothermus lipocalidus DSM
12680]
gi|297144791|gb|ADI01548.1| (p)ppGpp synthetase I, SpoT/RelA [Syntrophothermus lipocalidus DSM
12680]
Length = 724
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 120/324 (37%), Positives = 173/324 (53%), Gaps = 29/324 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA++LA+L++DA + A LL VVE V++++V+ + G A L+ ++
Sbjct: 49 LAVAIILAELELDAATLIAALLHDVVEDTEVTLEEVKLQFGEEVALLVDGVTKLG----- 103
Query: 174 KLQVLDDETAAA--LRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMK 230
KL+ + E A A LRK F DIR LI+ LA RL MR L Y P +Q+ I+ E ++
Sbjct: 104 KLEFMSKEEAQAENLRKMFLAMAKDIRVLIIKLADRLHNMRTLVYQPERKQVEIAEETLE 163
Query: 231 IHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCL 290
I PLAH + +ELEDLSF YL P +Y + L++ + Y +L+ +
Sbjct: 164 IFVPLAHRLGIFRFKWELEDLSFLYLEPDTYYELARRLKAKRKEREE----YVHELIARI 219
Query: 291 KTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSE 350
+ A L + + + GR K+ YS K+LK G+ +E+ D + +RV LV+T
Sbjct: 220 R--AELQKIGIEADIAGRPKNLYSIYTKMLKQGKDLDEIYDKIAIRV-------LVDTV- 269
Query: 351 VGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIR 410
R CY II +LWK +P R KDYIA PK N Y+SLH + G+ E+QIR
Sbjct: 270 ---RDCYGVLGIIHTLWKPLPGRFKDYIAMPKPNMYQSLHTTL----IGRGGEPFEVQIR 322
Query: 411 TEEMDMLAVNGTASHAFYKGGLTN 434
T EM A G A+H YK G T
Sbjct: 323 TWEMHRTAEYGIAAHWRYKEGKTK 346
>gi|256826847|ref|YP_003150806.1| (p)ppGpp synthetase, RelA/SpoT family [Cryptobacterium curtum DSM
15641]
gi|256582990|gb|ACU94124.1| (p)ppGpp synthetase, RelA/SpoT family [Cryptobacterium curtum DSM
15641]
Length = 856
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 109/323 (33%), Positives = 171/323 (52%), Gaps = 25/323 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ + VAL+L+DL+MDAE ++A LL VVE + +++ G A L+ ++
Sbjct: 158 VSHPVEVALILSDLRMDAETLAAALLHDVVEDTDTTKEELAHEFGEAVADLVDGVTKI-- 215
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++++ L DE AA +RK F DIR +++ LA RL MR L L +++ S E
Sbjct: 216 -TRIEVENLSDEQAATIRKMFVAMNKDIRVIVIKLADRLHNMRTLSALREDRRIFKSHET 274
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+AH + + +ELEDL+F YL P + + + S+ + Y ++
Sbjct: 275 LEIYAPIAHRLGIGQIKWELEDLAFFYLEPGKFKQISRMVAE----SRMEREEYLGNVID 330
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L + AD+ + GR K YS +K+ G+ E+ D++ +R+I+ +
Sbjct: 331 ILHGEMEKADI--GCQIMGRPKHLYSIYRKMTTHGKGFSEIYDLIAVRIIVDTVAQ---- 384
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY+ + SLW MP R KDYIA PK N Y+SLH V + G RPL E+Q
Sbjct: 385 -------CYSALGAVHSLWHPMPGRFKDYIAMPKYNMYQSLHTTV-IGPAG--RPL-EVQ 433
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IRTEEM ++ G A+H YK G
Sbjct: 434 IRTEEMHRMSEYGVAAHWRYKEG 456
>gi|46580488|ref|YP_011296.1| GTP pyrophosphokinase [Desulfovibrio vulgaris str. Hildenborough]
gi|387153786|ref|YP_005702722.1| (p)ppGpp synthetase I SpoT/RelA [Desulfovibrio vulgaris RCH1]
gi|46449907|gb|AAS96556.1| GTP pyrophosphokinase [Desulfovibrio vulgaris str. Hildenborough]
gi|311234230|gb|ADP87084.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio vulgaris RCH1]
Length = 717
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 172/334 (51%), Gaps = 26/334 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L+ L+VA LLA++ D ++AGLL VE I+ + G A ++ ++
Sbjct: 46 LSHPLAVADLLAEMHFDEATVAAGLLHDTVEDTDAGIEDIDREFGEEVADIVDGVTKISQ 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ ++ A +RK L +DIR L++ LA RL MR LD+ ++Q I+ E
Sbjct: 106 ---MTFDSKEEAQAENIRKMILAMSHDIRVLMVKLADRLHNMRTLDFQKSHKQQSIAQET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+APLA+ + + + ELEDL RY P + + WL ++ + LID ++ +
Sbjct: 163 LDIYAPLANRLGLHRIKLELEDLGLRYTKPDVFAQITDWLDENQMVERNLIDKVIARIRE 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L + + V+GR K + S KK+ + G +E++D++ RVI+ ++L
Sbjct: 223 VLDANGIEGE------VRGRIKHKSSIYKKMTQQGLALDEMHDIIAFRVIV---ADL--- 270
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY ++ + WK + R KDYI+ PKANGY+SLH V + G+ +EIQ
Sbjct: 271 -----RDCYAVLGLMHAQWKPVHGRFKDYISMPKANGYQSLHTTV-IGPEGER---IEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK-GGLTNPEEAKRL 441
IRT EM +A +G ASH YK G NP + +
Sbjct: 322 IRTREMHRMAEHGVASHWLYKDAGRVNPRDVAQF 355
>gi|418326147|ref|ZP_12937339.1| GTP diphosphokinase [Staphylococcus epidermidis VCU071]
gi|365226304|gb|EHM67523.1| GTP diphosphokinase [Staphylococcus epidermidis VCU071]
Length = 729
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/340 (32%), Positives = 181/340 (53%), Gaps = 25/340 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V+D A ++ ++K +
Sbjct: 55 IQVAGILTEMRLDGPTIVAGFLHDVIEDTSYTFEDVKDMFNEEIARIVDGVTKLKK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 112 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I + ++
Sbjct: 172 APLAHRLGINTIKWELEDTALRYIDSVQYFRIVNLMKKKRSEREAYI----TNAINKIEN 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ T +L +++ GR K YS +K++K + +++ D+L +R+I+ N +N
Sbjct: 228 EMTNMNLSGEIN--GRPKHIYSIYRKMIKQKKQFDQIFDLLAIRIIV----NSIND---- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY T ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 278 ---CYATLGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTV-VGPNGD--PL-EIQIRTH 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELA 452
EM +A +G A+H YK G T ++ + + + ELA
Sbjct: 331 EMHEIAEHGVAAHWAYKEGKTVNQKTQDFQNKLNWLKELA 370
>gi|314933798|ref|ZP_07841163.1| GTP diphosphokinase [Staphylococcus caprae C87]
gi|313653948|gb|EFS17705.1| GTP diphosphokinase [Staphylococcus caprae C87]
Length = 734
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 116/376 (30%), Positives = 189/376 (50%), Gaps = 26/376 (6%)
Query: 78 LSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQ 137
LS+S + K+ ++ Q + + + VA +L ++++D I AG L
Sbjct: 25 LSASEYEYVLKSYHIAYEAHQG-QFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHD 83
Query: 138 VVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRK-FCLTYYDI 196
V+E + + V+D A ++ ++K +K + +++ A RK F D+
Sbjct: 84 VIEDTPYTFEDVKDMFNEEVARIVDGVTKLKK---VKYRSKEEQQAENHRKLFIAIAKDV 140
Query: 197 RALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYL 256
R +++ LA RL MR L +PR +Q+ IS E ++I+APLAH + N + +ELED + RY+
Sbjct: 141 RVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELEDTALRYI 200
Query: 257 FPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTM 316
Y + ++ + + ID K +A + + + GR K YS
Sbjct: 201 DSVQYFRIVNLMKKKRSEREAYID------NAINKIEAEMEKMNLSGEINGRPKHIYSIY 254
Query: 317 KKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKD 376
+K++K + +++ D+L +R+I+ N +N CY ++ +LWK MP R KD
Sbjct: 255 RKMMKQKKQFDQIFDLLAIRIIV----NSIND-------CYAILGLVHTLWKPMPGRFKD 303
Query: 377 YIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNPE 436
YIA PK N Y+SLH V V NG PL EIQIRT EM +A +G A+H YK G T E
Sbjct: 304 YIAMPKQNMYQSLHTTV-VGPNGD--PL-EIQIRTYEMHEIAEHGVAAHWAYKEGKTVNE 359
Query: 437 EAKRLKAIMLAAAELA 452
+ + + + ELA
Sbjct: 360 KTQDFQNKLNWLKELA 375
>gi|120602193|ref|YP_966593.1| (p)ppGpp synthetase I SpoT/RelA [Desulfovibrio vulgaris DP4]
gi|120562422|gb|ABM28166.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio vulgaris DP4]
Length = 717
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 172/334 (51%), Gaps = 26/334 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L+ L+VA LLA++ D ++AGLL VE I+ + G A ++ ++
Sbjct: 46 LSHPLAVADLLAEMHFDEATVAAGLLHDTVEDTDAGIEDIDREFGEEVADIVDGVTKISQ 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ ++ A +RK L +DIR L++ LA RL MR LD+ ++Q I+ E
Sbjct: 106 ---MTFDSKEEAQAENIRKMILAMSHDIRVLMVKLADRLHNMRTLDFQKSHKQQSIAQET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+APLA+ + + + ELEDL RY P + + WL ++ + LID ++ +
Sbjct: 163 LDIYAPLANRLGLHRIKLELEDLGLRYTKPDVFAQITDWLDENQMVERNLIDKVIARIRE 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L + + V+GR K + S KK+ + G +E++D++ RVI+ ++L
Sbjct: 223 VLDANGIEGE------VRGRIKHKSSIYKKMTQQGLALDEMHDIIAFRVIV---ADL--- 270
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY ++ + WK + R KDYI+ PKANGY+SLH V + G+ +EIQ
Sbjct: 271 -----RDCYAVLGLMHAQWKPVHGRFKDYISMPKANGYQSLHTTV-IGPEGER---IEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK-GGLTNPEEAKRL 441
IRT EM +A +G ASH YK G NP + +
Sbjct: 322 IRTREMHRMAEHGVASHWLYKDAGRVNPRDVAQF 355
>gi|418412040|ref|ZP_12985305.1| GTP pyrophosphokinase [Staphylococcus epidermidis BVS058A4]
gi|410890054|gb|EKS37854.1| GTP pyrophosphokinase [Staphylococcus epidermidis BVS058A4]
Length = 729
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 110/340 (32%), Positives = 181/340 (53%), Gaps = 25/340 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V+D A ++ ++K +
Sbjct: 55 IQVAGILTEMRLDGPTIVAGFLHDVIEDTSYTFEDVKDMFNEEIARIVDGVTKLKK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 112 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I + ++
Sbjct: 172 APLAHRLGINTIKWELEDTALRYIDSVQYFRIVNLMKKKRSEREAYI----TNAINKIEN 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ T +L +++ GR K YS +K++K + +++ D+L +R+I+ N +N
Sbjct: 228 EMTNMNLSGEIN--GRPKHIYSIYRKMIKQKKQFDQIFDLLAIRIIV----NSIND---- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY T ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 278 ---CYATLGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTV-VGPNGD--PL-EIQIRTH 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELA 452
EM +A +G A+H YK G T ++ + + + ELA
Sbjct: 331 EMHEIAEHGVAAHWAYKEGKTVNQKTQDFQNKLNWLKELA 370
>gi|223044113|ref|ZP_03614152.1| RelA/SpoT family protein [Staphylococcus capitis SK14]
gi|417907908|ref|ZP_12551675.1| GTP diphosphokinase [Staphylococcus capitis VCU116]
gi|222442507|gb|EEE48613.1| RelA/SpoT family protein [Staphylococcus capitis SK14]
gi|341594995|gb|EGS37673.1| GTP diphosphokinase [Staphylococcus capitis VCU116]
Length = 729
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 116/376 (30%), Positives = 189/376 (50%), Gaps = 26/376 (6%)
Query: 78 LSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQ 137
LS+S + K+ ++ Q + + + VA +L ++++D I AG L
Sbjct: 20 LSASEYEYVLKSYHIAYEAHQG-QFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHD 78
Query: 138 VVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRK-FCLTYYDI 196
V+E + + V+D A ++ ++K +K + +++ A RK F D+
Sbjct: 79 VIEDTPYTFEDVKDMFNEEVARIVDGVTKLKK---VKYRSKEEQQAENHRKLFIAIAKDV 135
Query: 197 RALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYL 256
R +++ LA RL MR L +PR +Q+ IS E ++I+APLAH + N + +ELED + RY+
Sbjct: 136 RVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELEDTALRYI 195
Query: 257 FPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTM 316
Y + ++ + + ID K +A + + + GR K YS
Sbjct: 196 DSVQYFRIVNLMKKKRSEREAYID------NAINKIEAEMEKMNLSGEINGRPKHIYSIY 249
Query: 317 KKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKD 376
+K++K + +++ D+L +R+I+ N +N CY ++ +LWK MP R KD
Sbjct: 250 RKMMKQKKQFDQIFDLLAIRIIV----NSIND-------CYAILGLVHTLWKPMPGRFKD 298
Query: 377 YIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNPE 436
YIA PK N Y+SLH V V NG PL EIQIRT EM +A +G A+H YK G T E
Sbjct: 299 YIAMPKQNMYQSLHTTV-VGPNGD--PL-EIQIRTYEMHEIAEHGVAAHWAYKEGKTVNE 354
Query: 437 EAKRLKAIMLAAAELA 452
+ + + + ELA
Sbjct: 355 KTQDFQNKLNWLKELA 370
>gi|95930969|ref|ZP_01313698.1| metal dependent phosphohydrolase [Desulfuromonas acetoxidans DSM
684]
gi|95132978|gb|EAT14648.1| metal dependent phosphohydrolase [Desulfuromonas acetoxidans DSM
684]
Length = 358
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 116/334 (34%), Positives = 177/334 (52%), Gaps = 28/334 (8%)
Query: 104 PDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHE 163
P + ++VA LL L+MD ++AGLL V++ V+ ++R+R G H+L E
Sbjct: 40 PCGLPAFSHPVAVAELLLRLKMDVPTVAAGLLHDVLQKEMVTSAELRERFG-DQVHMLVE 98
Query: 164 SLRVKNNVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQL 222
L NN+ K ++ A + RK L D R +++ LA RL M++L LP QQ
Sbjct: 99 GLTRINNIIFKRG--EERQAESFRKMLLAIARDFRIILIKLADRLHGMQNLSCLPDAQQQ 156
Query: 223 MISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIY 282
I+ E M ++APLA+ + +++ +LEDLSF++L+P Y ++ + + +T +
Sbjct: 157 RIARETMDVYAPLANRMGISWMKSQLEDLSFQHLYPDEYAELNGKVMAFKTDA------- 209
Query: 283 KEQLLQCLKTD--ATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIK 340
+Q +Q +K + A LA D V GR K YS +KL + +++ D++ RVI+
Sbjct: 210 CDQYVQRVKNELHAILAKQGIDGDVSGRSKHIYSVYRKLQRQKIDLDQMYDLIAFRVIVT 269
Query: 341 PSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGK 400
R CY I+ + WK + R KDYIA PKAN Y+SLH +V + GK
Sbjct: 270 SV-----------RECYAALGIVHAEWKPVSGRFKDYIAMPKANMYQSLHTSV-IGPYGK 317
Query: 401 TRPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTN 434
ME+QIRTEEM +A G A+H YK G T
Sbjct: 318 R---MEVQIRTEEMHRIAEEGIAAHWMYKEGKTT 348
>gi|385799597|ref|YP_005836001.1| (p)ppGpp synthetase I SpoT/RelA [Halanaerobium praevalens DSM 2228]
gi|309388961|gb|ADO76841.1| (p)ppGpp synthetase I, SpoT/RelA [Halanaerobium praevalens DSM
2228]
Length = 715
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 113/325 (34%), Positives = 175/325 (53%), Gaps = 25/325 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L V+++LA+L++D I + LL VVE VS Q++ G AH++ ++ +
Sbjct: 49 LGVSIILAELELDIVSIVSSLLHDVVEDTSVSSQEIEKEFGAEVAHIVDGVTKL---TRM 105
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + D+ A +LRK F DIR +++ LA RL MR L+YL + ++ S E ++I+
Sbjct: 106 QFKTKADQQAESLRKMFVAMAEDIRVVLIKLADRLHNMRTLNYLKKAKRKEKSRETIEIY 165
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELEDLSFRYL P Y + ++++ + I E+L L++
Sbjct: 166 APLAHRLGMSKIKWELEDLSFRYLKPDMYYEISHKVQANRKQREKDIKEAIEKLNLTLES 225
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ AD + GR K YS K+ + +E+ D+ +RV+++ N E
Sbjct: 226 HSIEAD------IYGRPKHLYSIYNKMKRKEVEFDEIYDLTAVRVLVE------NVKE-- 271
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +WK MP R KDYIA PK+N Y+SLH V ++ NG PL E+QIRT
Sbjct: 272 ---CYEVLGVLHEIWKPMPGRFKDYIAMPKSNMYQSLHTTV-IAPNGD--PL-EVQIRTY 324
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEE 437
EM A G A+H YK G E+
Sbjct: 325 EMHKTAEYGIAAHWRYKEGKVGDEK 349
>gi|339445999|ref|YP_004712003.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Eggerthella sp. YY7918]
gi|338905751|dbj|BAK45602.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Eggerthella sp. YY7918]
Length = 791
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 115/330 (34%), Positives = 174/330 (52%), Gaps = 35/330 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA++LADL+MD E + A LL VE V+ + V A L+ ++ +
Sbjct: 101 VEVAIILADLRMDVETLVASLLHDTVEDTSVTREDVEREFSPEIAQLVEGVTKI---TRI 157
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+++ L DE AA +RK + DIR +++ LA RL MR L L +++ S E ++I+
Sbjct: 158 EVESLSDEQAATIRKMLVAMSKDIRVIVIKLADRLHNMRTLGALREDRRIFKSRETLEIY 217
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+AH + N + +ELEDLSF YL P + V + T S+ + Y +Q+++ L
Sbjct: 218 APIAHRLGINNIKWELEDLSFFYLEPNKFKQVSRMV----TESRAEREGYLDQIIEILHG 273
Query: 293 DATLADLVEDVSVQ----GRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ +E V +Q GR K YS +K+ K G+ E+ D++ +R+I+K +
Sbjct: 274 E------MEKVGIQAQIMGRPKHLYSIYQKMTKKGKGFSEIYDLIAVRIIVKSVKD---- 323
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY+ + +LW MP R KDYIA PK N Y+SLH V + G RPL E+Q
Sbjct: 324 -------CYSALGAVHTLWHPMPGRFKDYIAMPKFNMYQSLHTTV-IGPAG--RPL-EVQ 372
Query: 409 IRTEEMDMLAVNGTASHAFY--KGGLTNPE 436
IRTE+M + G A+H Y KGG E
Sbjct: 373 IRTEDMHRTSEYGVAAHWRYKEKGGKGGDE 402
>gi|51893575|ref|YP_076266.1| GTP pyrophosphokinase [Symbiobacterium thermophilum IAM 14863]
gi|51857264|dbj|BAD41422.1| GTP pyrophosphokinase [Symbiobacterium thermophilum IAM 14863]
Length = 735
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 111/334 (33%), Positives = 173/334 (51%), Gaps = 25/334 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++VA ++A L++D E I+A LL V+E GV +++ +R G A L+ ++
Sbjct: 49 ITHPIAVAEIVASLELDEESIAAALLHDVLEDCGVKYEELEERFGKEVATLVDGVSKLDR 108
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+ D+ LRK F D+R +++ LA RL MR L + P Q+ I+ E
Sbjct: 109 ---LQFTSRDEAQVENLRKMFLAMAKDLRVILIKLADRLHNMRTLKHQPSDAQVRIAQET 165
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M I+APLAH + + + +ELEDL+FR L P Y + + + +QL +
Sbjct: 166 MDIYAPLAHRLGLSEIKWELEDLAFRILEPDRYQEMAYLVARKRQERMAITQDLMDQLRE 225
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L+ + A+ + GR K YS KK+ + G+ ++ D++ +R+I++ +
Sbjct: 226 VLEKEGIQAE------ISGRPKHFYSIYKKMYRQGKDISQIYDLIAIRIIVEEVKD---- 275
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY II S WK +P R KDYIA PK N Y+SLH V + +G+ EIQ
Sbjct: 276 -------CYAVLGIIHSHWKPLPLRFKDYIATPKPNMYQSLHTTV-IGPHGEP---FEIQ 324
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLK 442
IRT EM A G A+H YK G T+ E ++L+
Sbjct: 325 IRTREMHRTAEFGVAAHWSYKEGKTDKEFDRKLQ 358
>gi|239637561|ref|ZP_04678533.1| GTP pyrophosphokinase [Staphylococcus warneri L37603]
gi|239596779|gb|EEQ79304.1| GTP pyrophosphokinase [Staphylococcus warneri L37603]
Length = 729
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 117/388 (30%), Positives = 196/388 (50%), Gaps = 34/388 (8%)
Query: 78 LSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQ 137
LS S + + K+ ++ Q + + + VA +L ++++D I AG L
Sbjct: 20 LSESEYQYVLKSYHIAYEAHQG-QFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHD 78
Query: 138 VVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRK-FCLTYYDI 196
V+E + V++ A ++ ++K +K + +++ A RK F D+
Sbjct: 79 VIEDTAYTFDDVKNMFNEEVARIVDGVTKLKK---VKYRSKEEQQAENHRKLFIAIAKDV 135
Query: 197 RALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYL 256
R +++ LA RL MR L +PR +Q+ IS E ++I+APLAH + N + +ELED + RY+
Sbjct: 136 RVILVKLADRLHNMRTLKAMPREKQIRISKETLEIYAPLAHRLGINTIKWELEDTALRYI 195
Query: 257 FPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTM 316
Y + ++ + + ID + ++T+ +V +++ GR K YS
Sbjct: 196 DSVQYFRIVNLMKKKRSEREAYID----NAIGQIETEMDKMSIVGEIN--GRPKHIYSIY 249
Query: 317 KKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKD 376
+K++K + +++ D+L +R+I+ N +N CY ++ +LWK MP R KD
Sbjct: 250 RKMMKQKKQFDQIFDLLAIRIIV----NTIND-------CYAILGLVHTLWKPMPGRFKD 298
Query: 377 YIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNPE 436
YIA PK N Y+SLH V V NG PL EIQIRT EM +A +G A+H YK G T E
Sbjct: 299 YIAMPKQNMYQSLHTTV-VGPNGD--PL-EIQIRTYEMHEIAEHGVAAHWAYKEGKTVNE 354
Query: 437 EAKRLKAIMLAAAELAALRLKDIPSTNH 464
+ + + + LKD+ T+H
Sbjct: 355 KTQDFQNKLNW--------LKDLAETDH 374
>gi|340751522|ref|ZP_08688334.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium mortiferum ATCC 9817]
gi|229420490|gb|EEO35537.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium mortiferum ATCC 9817]
Length = 727
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 170/318 (53%), Gaps = 29/318 (9%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVN- 172
+ V +L D++MD + I AG+L +VE +++ ++ G A L+ ++K N
Sbjct: 50 VEVTKILIDMKMDTDTIVAGILHDIVEDTLITLADIKYNFGETVATLVDGVTKLKTLPNG 109
Query: 173 LKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKI 231
K Q DE +RK L ++R +I+ LA RL MR + Y+ +Q+ IS E + I
Sbjct: 110 TKKQ---DEN---IRKMILAMAQNLRVIIIKLADRLHNMRTMKYMKPEKQISISQETLDI 163
Query: 232 HAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLK 291
+APLAH + + +ELEDL+ RYL P Y+ + + + S + + I + E ++ L
Sbjct: 164 YAPLAHRLGIAKIKWELEDLALRYLKPKEYMNIKSLIDSKKKEREEYIQGFIETIVNLLH 223
Query: 292 TDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEV 351
SV+GR+K YS KK+ + + +++ D++G+R+I+
Sbjct: 224 ETGIKG------SVKGRFKHFYSIYKKMYEKNKEFDDIYDLMGVRIIVDT---------- 267
Query: 352 GERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRT 411
E CY T +I S +K +P R KDYIA PK+N Y+S+H + V GK +EIQIRT
Sbjct: 268 -EGECYNTLGVIHSHFKPVPGRFKDYIAVPKSNNYQSIHTTI-VGPQGK---FIEIQIRT 322
Query: 412 EEMDMLAVNGTASHAFYK 429
EEMD +A G A+H YK
Sbjct: 323 EEMDKVAEEGIAAHWSYK 340
>gi|420157993|ref|ZP_14664817.1| putative GTP diphosphokinase [Clostridium sp. MSTE9]
gi|394755340|gb|EJF38587.1| putative GTP diphosphokinase [Clostridium sp. MSTE9]
Length = 725
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 109/322 (33%), Positives = 169/322 (52%), Gaps = 25/322 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+SVA +L +L MD+E ++AGLL VVE V + Q+R + G A L+ ++ +
Sbjct: 55 VSVACILVELGMDSESVAAGLLHDVVEDTSVGLDQIRKQFGSDIASLIDGVTKLGR---I 111
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+++ A +RK + DIR +I+ LA RL MR L+Y+ +Q +LE M+++
Sbjct: 112 PYSSREEQQAENIRKMLIAMSEDIRVIIIKLADRLHNMRTLEYMTPQKQRDKALENMEVY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+AH + + ELEDLS RYL P +Y ++ L + I+ K +
Sbjct: 172 APIAHRLGIRAIKEELEDLSLRYLDPIAYQEIENTLELRKKDRDHFIETTKALVYD---- 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
++ ++ +V +QGR KS + +K+ GR +E+ D+ +RVI+ + VN
Sbjct: 228 --RVSRMIPNVYLQGRVKSIHGIYRKVFMQGRSMDEIYDIYAVRVIV----DTVND---- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II +++ +P+R KDYI+ PK N Y+SLH V GK E+QIRT
Sbjct: 278 ---CYNVLGIIHDMFRPLPNRFKDYISTPKPNMYQSLHTTV----IGKEGIPFEVQIRTW 330
Query: 413 EMDMLAVNGTASHAFYKGGLTN 434
EM A G A+H YK GL
Sbjct: 331 EMHHTAEYGIAAHWKYKLGLAG 352
>gi|322437264|ref|YP_004219476.1| (p)ppGpp synthetase I SpoT/RelA [Granulicella tundricola MP5ACTX9]
gi|321164991|gb|ADW70696.1| (p)ppGpp synthetase I, SpoT/RelA [Granulicella tundricola MP5ACTX9]
Length = 826
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 117/319 (36%), Positives = 169/319 (52%), Gaps = 29/319 (9%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L V +LADL+MD+ I+AGLL VE V+ ++ R AH++ ++ +
Sbjct: 141 LEVCQILADLKMDSTAIAAGLLHDAVEDTDVTSPEIAKRFNEQVAHIVEGVTKLDK---I 197
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K +D A +RK L D+R +I+ LA RL MR L++L +Q I+ E + I+
Sbjct: 198 KFANREDHQAENIRKMLLAMVTDVRVVIIKLADRLHNMRTLEHLKPEKQQKIARETLDIY 257
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + L ELEDL+FRY P++YL V + L D +E L ++T
Sbjct: 258 APLAHRLGMGKLRGELEDLAFRYTDPYAYLQVAQEVEH-------LRDANEETLTNIVET 310
Query: 293 -DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIP-EEVNDVLGLRVIIKPSSNLVNTSE 350
LA+ D V+ R K YS +KL +IP ++V D+L +RVI
Sbjct: 311 VRGKLAEAGIDGRVESRIKRLYSIQQKLTAQ-KIPVDQVYDLLAVRVI---------CHT 360
Query: 351 VGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIR 410
VGE CY I+Q+LW+ +P R KD+IA P+ N Y+SLH + ++ G E+QIR
Sbjct: 361 VGE--CYAVFGILQNLWRPVPGRFKDFIATPRPNLYQSLHTTL-MAPGGHQ---FEVQIR 414
Query: 411 TEEMDMLAVNGTASHAFYK 429
TEEM +A G A+H YK
Sbjct: 415 TEEMHRIAEEGIAAHWKYK 433
>gi|206901091|ref|YP_002250691.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Dictyoglomus
thermophilum H-6-12]
gi|206740194|gb|ACI19252.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Dictyoglomus
thermophilum H-6-12]
Length = 727
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 116/328 (35%), Positives = 166/328 (50%), Gaps = 25/328 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T + VA +L DL M+ VI AGLL V+E V +++ G L+ +++
Sbjct: 47 ITHPVEVAKILMDLGMEETVIIAGLLHDVLEDTKVPKEEIEKEFGKDVLSLVEAITKLEK 106
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L + A LRK F DIR +I+ LA RL M+ L Y +Q I+ E
Sbjct: 107 ---LSFYPTEAYRAQNLRKMFIAMAKDIRVIIIKLADRLHNMQTLQYHDEEKQKRIAKET 163
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+APLAH + + + LEDL+FRYL P Y +V + + I+ E + +
Sbjct: 164 LEIYAPLAHRLGVWDIKWRLEDLAFRYLEPEKYHYVAKKVAETRKEREKFIEKAIEIIKE 223
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
LK A+ V GR K YS +K+L+ G EE+ D+LG+RVI+
Sbjct: 224 ELKKTGINAE------VTGRAKHLYSIYQKMLRRGIEIEEMYDLLGVRVIVN-------- 269
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
E+ CY II +LWK +P R KDYIA K+N Y+SLH V D +PL E+Q
Sbjct: 270 ---SEKECYEVLGIIHNLWKPVPGRFKDYIANKKSNNYQSLHTTVIAMDG---KPL-EVQ 322
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPE 436
IRT EM +A G A+H YK + P+
Sbjct: 323 IRTWEMHRVAEYGIAAHWLYKEEIKKPD 350
>gi|295106146|emb|CBL03689.1| (p)ppGpp synthetase, RelA/SpoT family [Gordonibacter pamelaeae
7-10-1-b]
Length = 802
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 113/321 (35%), Positives = 170/321 (52%), Gaps = 27/321 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA++LADL+MD E + A LL VE V+ +QV A L+ ++ +
Sbjct: 107 VEVAIILADLRMDVETLCAALLHDTVEDTCVTTEQVAVEFNEQVAQLVEGVTKI---TRI 163
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+++ L DE AA +RK F DIR +++ LA RL MR L L +++ + E ++I+
Sbjct: 164 EVESLSDEQAATIRKMFVAMSKDIRVIVIKLADRLHNMRTLGALREDRRIFKARETLEIY 223
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+AH + N + +ELEDLSF YL P Y V + T S+ + Y +Q++ L
Sbjct: 224 APIAHRLGINNIKWELEDLSFYYLEPNKYKQVSRMV----TESRAEREGYLDQIIGILHD 279
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ + + GR K YS +K+ + G+ E+ D++ +R+I+ PS
Sbjct: 280 EMEKVGIT--AQIMGRPKHLYSIYQKMTQKGKGFSEIYDLIAVRIIV-PSV--------- 327
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY + +LW MP R KDYIA PK N Y+SLH V + G RPL E+QIRTE
Sbjct: 328 -KDCYLALGAVHTLWHPMPGRFKDYIAMPKYNMYQSLHTTV-IGPAG--RPL-EVQIRTE 382
Query: 413 EMDMLAVNGTASHAFY--KGG 431
+M + G A+H Y KGG
Sbjct: 383 DMHRQSEYGVAAHWRYKEKGG 403
>gi|291278481|ref|YP_003495316.1| GTP pyrophosphokinase [Deferribacter desulfuricans SSM1]
gi|290753183|dbj|BAI79560.1| GTP pyrophosphokinase [Deferribacter desulfuricans SSM1]
Length = 710
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 118/334 (35%), Positives = 182/334 (54%), Gaps = 34/334 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L+ L+VA +LA++ MD + + AGLL +E + +++ + G A L+ ++
Sbjct: 51 LSHPLNVAYILAEMNMDLDTVVAGLLHDTLEDTDATYEELVNLFGEDVAFLVDGVSKI-G 109
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+N K +++ A A RK ++ DIR +++ LA RL MR +++LP ++ I+ E
Sbjct: 110 KINFKSH--EEKQAEAFRKMLISMSKDIRVIVIKLADRLHNMRTINFLPEEKKKRIAKET 167
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLR----SHETGSKPLIDIYKE 284
++I+APLAH + ++ +ELEDLSFR L P +Y + ++ E K +I+I KE
Sbjct: 168 LEIYAPLAHRLGIAWIKWELEDLSFRILNPEAYYDIYNKVKLKRSEREQYLKEVINIVKE 227
Query: 285 QLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSN 344
L+ + A+ V GR K YS K+++ +E+ D+L LRV
Sbjct: 228 ----VLEKEGIKAE------VTGRPKHFYSIYTKMIRKKTSFDEIYDLLALRV------- 270
Query: 345 LVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPL 404
LVNT VGE CY II +LWK + R KDYIA PK+N Y+SLH V + G
Sbjct: 271 LVNT--VGE--CYAVLGIIHNLWKPIQGRIKDYIAMPKSNMYQSLHTTV-IGPRGMK--- 322
Query: 405 MEIQIRTEEMDMLAVNGTASHAFYK-GGLTNPEE 437
+E QIRT EM +A G A+H YK G + +P+E
Sbjct: 323 VEFQIRTYEMHRIAEEGIAAHWKYKEGKVFDPKE 356
>gi|82523943|emb|CAI78665.1| guanosine polyphosphate pyrophosphohydrolases/synthetases
[uncultured delta proteobacterium]
Length = 713
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 119/348 (34%), Positives = 182/348 (52%), Gaps = 29/348 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
LT + VA +LAD++MDA I +GLL VE +++QV + G A L+ L +
Sbjct: 46 LTHPMEVAGILADMKMDAATIISGLLHDTVEDTLSTVEQVEEEFGKDVAFLV-SGLTKLS 104
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ + Q ++ A RK L DIR L++ LA R+ MR L Y P +++ I+ E
Sbjct: 105 LISFRSQ--EERQAENFRKMILAMSSDIRILLVRLADRIHNMRTLQYQPLEKRVYIARET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDT-WLRSHETGSKPLIDIYKEQLL 287
+ ++APLA+ + N++ ELEDLSF+YL P +Y + ++S+E+ + Y E++
Sbjct: 163 IDVYAPLANRLGINWIKTELEDLSFQYLSPEAYNELSMRVVQSNESRHR-----YTEEVK 217
Query: 288 QCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVN 347
+ + + L + V+GR K Y KK+ + +EV D++ RVI+
Sbjct: 218 KLISEE--LKKFKIEGEVEGRAKHLYGIYKKMHEQHLNFDEVYDLIAFRVILDSDQ---- 271
Query: 348 TSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEI 407
E+ CY T ++ SLWK +P R KDYIA PKAN Y+SLH V G +EI
Sbjct: 272 -----EKGCYETLSVVHSLWKPVPGRFKDYIAMPKANNYQSLHTTVI----GPYGERLEI 322
Query: 408 QIRTEEMDMLAVNGTASHAFYKGGLTNPEEA----KRLKAIMLAAAEL 451
QIRT M A G A+H YK G +E K+L+ I+ E+
Sbjct: 323 QIRTRAMHEWAEKGIAAHWRYKEGRAYKDEEENQIKKLREILEIQQEI 370
>gi|222151518|ref|YP_002560674.1| GTP pyrophosphokinase [Macrococcus caseolyticus JCSC5402]
gi|222120643|dbj|BAH17978.1| GTP pyrophosphokinase [Macrococcus caseolyticus JCSC5402]
Length = 730
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 177/331 (53%), Gaps = 27/331 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA++++D I AG L VVE + + ++ A+++ +++ +
Sbjct: 55 IQVAGILAEMKLDGPTIVAGFLHDVVEDTPYTYEDLKQMFNEEVAYIVDGVTKLEK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +E A RK F D+R +++ LA RL MR L +P +Q+ I+ E ++I+
Sbjct: 112 KYRSKAEEQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPHEKQVRIAKETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED+S RY+ Y + ++ + + Y E + ++
Sbjct: 172 APLAHRLGINTIKWELEDISLRYIDSIQYFRIVHLMKKKRSERES----YIENAIDNIQK 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ + + +++ GR K YS +K++K + +++ D+L +R+I+ +
Sbjct: 228 EMQITGINGEIT--GRPKHIYSIYRKMVKQKKQFDQIFDLLAIRIIVDSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 278 ---CYAVLGLVHTLWKPMPGRFKDYIAMPKPNMYQSLHTTV-VGPNGD--PL-EIQIRTH 330
Query: 413 EMDMLAVNGTASHAFYKGG--LTNPEEAKRL 441
EM +A +G A+H YK G L NP+EA+ L
Sbjct: 331 EMHEIAEHGVAAHWAYKEGKSLVNPDEARSL 361
>gi|337288950|ref|YP_004628422.1| (p)ppGpp synthetase I SpoT/RelA [Thermodesulfobacterium sp. OPB45]
gi|334902688|gb|AEH23494.1| (p)ppGpp synthetase I, SpoT/RelA [Thermodesulfobacterium geofontis
OPF15]
Length = 725
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 120/369 (32%), Positives = 192/369 (52%), Gaps = 34/369 (9%)
Query: 71 LTERMNVLSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMDAEVI 130
L E + L ++R++ KA + + + + + L+ + VA +LA +++D I
Sbjct: 8 LDEIQSYLPGCNTRIVEKAYEWAARIHEG-QMRKSGEPYLSHPMEVAYILAQMKLDLPTI 66
Query: 131 SAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN---NVNLKLQVLDDETAAALR 187
+AGLL VVE VSI+ ++ G A ++ ++KN +V+ Q A +LR
Sbjct: 67 AAGLLHDVVEDSQVSIEDIKKEFGEEVAFIVDGVTKLKNLPSSVDKLTQ-----QAESLR 121
Query: 188 KFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSF 246
K D+R +++ LA RL MR L+Y +++ I+ E ++I+APLA + +++
Sbjct: 122 KIIFAMSKDLRVILVKLADRLHNMRTLEYQAEHKRQRIAKETLEIYAPLAGRLGIDWVKC 181
Query: 247 ELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQ 306
ELEDL+F+YL+P Y + + +K ++ K+ L + L+ + V
Sbjct: 182 ELEDLAFKYLYPKEYERLKIEVEKRVKEAKEYVENVKKILEELLEKNNIKG------KVL 235
Query: 307 GRYKSRYSTMKKLLKDGRIPEEVN---DVLGLRVIIKPSSNLVNTSEVGERACYTTREII 363
GR K YS KKL K +E++ D++G R+I VNT E CY T ++
Sbjct: 236 GRVKHLYSVYKKLQKYNLTIDELDQIYDLIGFRII-------VNTVE----ECYKTLGLV 284
Query: 364 QSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTA 423
+LW +P R KDYI+ PK N Y+SLH V + N K +EIQIRTE MD +A G A
Sbjct: 285 HTLWTPIPGRFKDYISLPKPNMYQSLHTTV-LGPNSKK---IEIQIRTEYMDRVANEGIA 340
Query: 424 SHAFYKGGL 432
+H YK G+
Sbjct: 341 AHFLYKEGI 349
>gi|339010669|ref|ZP_08643239.1| GTP pyrophosphokinase [Brevibacillus laterosporus LMG 15441]
gi|421875402|ref|ZP_16306994.1| GTP pyrophosphokinase [Brevibacillus laterosporus GI-9]
gi|338772824|gb|EGP32357.1| GTP pyrophosphokinase [Brevibacillus laterosporus LMG 15441]
gi|372455610|emb|CCF16543.1| GTP pyrophosphokinase [Brevibacillus laterosporus GI-9]
Length = 727
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 167/319 (52%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
++VA +L D+ MDA ++AG L VVE +++ +R G AHL+ +++ +
Sbjct: 51 IAVAGILTDMHMDAVTVAAGFLHDVVEDTDITLDDLRKEFGSEVAHLVDGVTKLEK---I 107
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK + DIR +++ LA RL MR L ++ +Q IS E ++I
Sbjct: 108 KYKSKEEQLAENHRKMLVAMAQDIRVILIKLADRLHNMRTLRHMSEEKQREISDETLEIF 167
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + ++ +ELED + RYL P Y + ++ T + I K + T
Sbjct: 168 APLAHRLGIAFVKWELEDTALRYLNPQQYYRIVNLMQKKRTEREEYISEAKAMI-----T 222
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
D L +L + + GR K YS KK++ + E+ D+L LR+I+
Sbjct: 223 DK-LHELHIEAEIAGRPKHIYSIYKKMVSQNKQFNEIYDLLALRIIVNDI---------- 271
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
R CY I+ +LWK MP R KDYIA PKAN Y+SLH V + G+ PL E+QIRT
Sbjct: 272 -RDCYAVLGIVHTLWKPMPGRFKDYIAMPKANMYQSLHTTV-IGPKGE--PL-EVQIRTW 326
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M A G A+H YK G
Sbjct: 327 DMHRTAEIGIAAHWAYKEG 345
>gi|261405422|ref|YP_003241663.1| (p)ppGpp synthetase I SpoT/RelA [Paenibacillus sp. Y412MC10]
gi|329926741|ref|ZP_08281149.1| GTP diphosphokinase [Paenibacillus sp. HGF5]
gi|261281885|gb|ACX63856.1| (p)ppGpp synthetase I, SpoT/RelA [Paenibacillus sp. Y412MC10]
gi|328938941|gb|EGG35309.1| GTP diphosphokinase [Paenibacillus sp. HGF5]
Length = 725
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 165/319 (51%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA ++ ++QMD I A LL VVE VS++Q+R+R G A L+ +++ +
Sbjct: 49 LAVADIVVNMQMDTLSIIAALLHDVVEDTTVSLEQIRERFGDTCAMLVDGLTKLER---I 105
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ RK F DIR +++ LA RL MR L Y Q IS E ++I
Sbjct: 106 QFRSKEEQQNENYRKMFIAMARDIRVIVIKLADRLHNMRTLKYQSEESQRRISYETLEIF 165
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
P+AH + + + +E+ED++ RYL P Y + + + ID ++ C++
Sbjct: 166 CPIAHRLGISAIKWEMEDIALRYLNPQQYYRIANLMHKKRAEREQYID----NVIVCIRE 221
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ D+S GR K YS KK+ + E+ D+L +R+I+ N+
Sbjct: 222 KLDEMGIQADLS--GRPKHIYSVFKKMTVKNKQFNEIYDLLAIRIIV---DNI------- 269
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY T II +LWK MP R KDYIA PK N Y+SLH V V NG+ E+QIRT
Sbjct: 270 -KDCYATLGIIHTLWKPMPGRFKDYIAMPKTNMYQSLHTTV-VGPNGEP---TEVQIRTW 324
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM A G A+H YK G
Sbjct: 325 EMHRTAEFGIAAHWAYKEG 343
>gi|225175541|ref|ZP_03729535.1| (p)ppGpp synthetase I, SpoT/RelA [Dethiobacter alkaliphilus AHT 1]
gi|225168870|gb|EEG77670.1| (p)ppGpp synthetase I, SpoT/RelA [Dethiobacter alkaliphilus AHT 1]
Length = 721
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 116/328 (35%), Positives = 170/328 (51%), Gaps = 35/328 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L V+ +LA+L+MD + I AGLL VVE V+++ + ++ G A L+ ++
Sbjct: 46 ITHPLGVSHILAELEMDMDTIVAGLLHDVVEDTEVTLEDIEEKFGEEIAMLVDGVTKLSK 105
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+ + ++ A LRK F DIR L++ LA R MR L YL +Q IS E
Sbjct: 106 ---LEYKSKEEHQAENLRKMFIAMAKDIRVLLIKLADRTHNMRTLKYLTSIKQQAISRET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYL-FPFSYLFVDTWLRSHETGSKPLIDIYKEQLL 287
++I+APLAH + + +ELEDL+FR+L Y VD + + +EQ +
Sbjct: 163 LEIYAPLAHRLGIYKIKWELEDLAFRFLERDRYYALVDKLAKKRQE---------REQFI 213
Query: 288 QCLKTDATLADLVEDVSVQ----GRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSS 343
+ TL +EDV +Q GR K YS +K+ + G+ E+ D+ +R+I+
Sbjct: 214 GQIMD--TLEPKLEDVGIQAHISGRPKHLYSISQKMKEQGKEFHEIYDLTAIRIIVDSLK 271
Query: 344 NLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRP 403
+ CY I+ +LWK +P R KDYIA PK N Y+SLH V V N
Sbjct: 272 D-----------CYGALGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHTLVMVGKN----E 316
Query: 404 LMEIQIRTEEMDMLAVNGTASHAFYKGG 431
L+E+QIRT EM A G A+H YK G
Sbjct: 317 LLEVQIRTWEMHRTAEFGIAAHWRYKEG 344
>gi|403744544|ref|ZP_10953770.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus hesperidum
URH17-3-68]
gi|403122078|gb|EJY56326.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus hesperidum
URH17-3-68]
Length = 725
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 114/321 (35%), Positives = 161/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LADLQ+DA + A LL VVE V+ + G A L+ ++K
Sbjct: 52 ITHPLAVAYILADLQLDATAVVAALLHDVVEDTSVTDSNIVQTFGAEVASLVDGVTKLKR 111
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ +++ A LRK F DIR LI+ LA RL MR L Y Q+ + E
Sbjct: 112 ---IRFDSREEQQAENLRKMFMAMARDIRVLIIKLADRLHNMRTLRYQTPATQMRKARET 168
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I APLAH + N + +ELED+S RYL P Y + + + I+ + L Q
Sbjct: 169 LEIFAPLAHRLGINTIKWELEDISLRYLNPQQYYRIVNLMARKRQEREQFIEGVMDVLRQ 228
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L +L V GR K YS +K+ + E+ D+ +RV ++ +
Sbjct: 229 ------KLGELNLKAEVSGRAKHIYSIYRKMTTQHKEFNEIYDLFAIRVTVESIKD---- 278
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY ++ ++WK MP R KDYIA PKAN Y+SLH V + NG+ PL EIQ
Sbjct: 279 -------CYGVLGVVHTMWKPMPGRFKDYIAMPKANMYQSLHTTV-IGPNGE--PL-EIQ 327
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM A G A+H YK
Sbjct: 328 IRTWEMHQTAEYGIAAHWVYK 348
>gi|226227361|ref|YP_002761467.1| GTP pyrophosphokinase [Gemmatimonas aurantiaca T-27]
gi|226090552|dbj|BAH38997.1| GTP pyrophosphokinase [Gemmatimonas aurantiaca T-27]
Length = 717
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/343 (33%), Positives = 176/343 (51%), Gaps = 24/343 (6%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ + VA +LADLQ+D +++GLL +VE ++++ + G A ++ ++
Sbjct: 44 VSHCIEVARILADLQLDTATVTSGLLHDIVEDTDITVEDIEREFGSEIAQIVDGLTKI-- 101
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
NL + ++ RK L+ D R +++ LA RL MR LD+L ++ I+ E
Sbjct: 102 -ANLPMSSREERQVENYRKLLLSIAKDARVILIKLADRLHNMRTLDWLAPEKRRRIAQET 160
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++APLAH + +ELEDL+F++L P +Y + + + + LI +E L +
Sbjct: 161 RDLYAPLAHRFGMAKVRWELEDLAFKHLEPDAYKTLARLVAAKRGEREALIAQMREPLEK 220
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L TDA +A DV V GR K +S KK+ + R E++ D+L +RVI+ N++
Sbjct: 221 RL-TDAGIA----DVEVTGRPKHLWSIYKKMQQRDRPYEDIYDLLAIRVIV---PNVLE- 271
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY +I W + R KDYIA+PK+NGY+SLH V G R L EIQ
Sbjct: 272 -------CYHALGVIHDGWTPVQERIKDYIAQPKSNGYQSLHTTV----FGPGRQLFEIQ 320
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAEL 451
IRT +M A G A+H YK N +E R A EL
Sbjct: 321 IRTRDMHRTADFGIAAHWLYKENTKNSDELDRHLAWFRQVLEL 363
>gi|442555432|ref|YP_007365257.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Lawsonia
intracellularis N343]
gi|441492879|gb|AGC49573.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Lawsonia
intracellularis N343]
Length = 733
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 163/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L+ L+VA +L+++ DA I A LL VE S++ + G A +++ ++
Sbjct: 58 LSHPLAVAEMLSEMGFDAYAIMAALLHDTVEDTKCSLEDIETEFGKQVADIVNGVTKISM 117
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + +++ A RK L DIR I+ LA RL MR L++ +++ I+ E
Sbjct: 118 ---MSFESKEEQQAENFRKMILAMSQDIRVPIVKLADRLHNMRTLNFQKPHKRQSIAQET 174
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M I+APLA+ + + + ELEDLSF+YL P Y + TW+ S+ + LI+ ++
Sbjct: 175 MDIYAPLANRLGLHRIKLELEDLSFKYLHPDIYTQISTWMHSNRVVERNLIERIISKIKA 234
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L + +VQGR K YS KK+++ + ++D+L RVI+ S+
Sbjct: 235 ILHKNGLKG------TVQGRVKHVYSIHKKMVEQHLTLDSMHDILAFRVIVDTISD---- 284
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY ++ S WK + R KDYI+ PK NGY+SLH V G +EIQ
Sbjct: 285 -------CYAVLGLLHSQWKPLHGRFKDYISMPKVNGYQSLHTTV----MGPEGERIEIQ 333
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM LA G ASH YK
Sbjct: 334 IRTNEMHKLAEQGVASHWLYK 354
>gi|227529150|ref|ZP_03959199.1| GTP diphosphokinase [Lactobacillus vaginalis ATCC 49540]
gi|227350994|gb|EEJ41285.1| GTP diphosphokinase [Lactobacillus vaginalis ATCC 49540]
Length = 750
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/343 (32%), Positives = 174/343 (50%), Gaps = 23/343 (6%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL MD E + AG L +VE G ++ +++ G A ++ ++ +
Sbjct: 60 IQVAGILADLHMDPETVCAGYLHDIVEDTGATLDDIKELFGPTIALIVDGDTKLGK---I 116
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + ++ AA RK L DIR +I+ LA RL MR L +L +Q IS E ++I+
Sbjct: 117 QYKSNKEQMAATHRKLLLAMSKDIRVMIVKLADRLHNMRTLQHLRPDKQRRISNETLEIY 176
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+A + + + +ELEDLS RYL P Y + + S ID + + +K
Sbjct: 177 APIADRLGISTIKWELEDLSLRYLNPQQYYRIVHLMNSRRDQRVEYID----EAIGEIKK 232
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ +L +V + GR K YS +K++ + ++ D+L +R+++ +
Sbjct: 233 AISDLNLGPNVEIYGRPKHIYSIYRKMVNQHKQFSQIYDLLAVRIVVDSIKD-------- 284
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKANGY+SLH + + GK PL E+QIRT
Sbjct: 285 ---CYAALGAIHTNWKPMPGRFKDYIAMPKANGYQSLHTTI-MGPGGK--PL-EVQIRTH 337
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALR 455
M +A G A+H YK G TN + R + E+ LR
Sbjct: 338 HMHQVAEYGVAAHWAYKEGKTNGIQQTRDSQKLNVVKEILELR 380
>gi|94986614|ref|YP_594547.1| guanosine polyphosphate pyrophosphohydrolases/synthetases [Lawsonia
intracellularis PHE/MN1-00]
gi|94730863|emb|CAJ54226.1| Guanosine polyphosphate pyrophosphohydrolases/synthetases [Lawsonia
intracellularis PHE/MN1-00]
Length = 731
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/321 (34%), Positives = 166/321 (51%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L+ L+VA +L+++ DA I A LL VE S++ + G A +++ ++
Sbjct: 56 LSHPLAVAEMLSEMGFDAYAIMAALLHDTVEDTKCSLEDIETEFGKQVADIVNGVTKISM 115
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + +++ A RK L DIR I+ LA RL MR L++ +++ I+ E
Sbjct: 116 ---MSFESKEEQQAENFRKMILAMSQDIRVPIVKLADRLHNMRTLNFQKPHKRQSIAQET 172
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M I+APLA+ + + + ELEDLSF+YL P Y + TW+ S+ + LI E+++
Sbjct: 173 MDIYAPLANRLGLHRIKLELEDLSFKYLHPDIYTQISTWMHSNRVVERNLI----ERIIS 228
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+K A L +VQGR K YS KK+++ + ++D+L RVI+ S+
Sbjct: 229 KIK--AILHKNGLKGTVQGRVKHVYSIHKKMVEQHLTLDSMHDILAFRVIVDTISD---- 282
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY ++ S WK + R KDYI+ PK NGY+SLH V G +EIQ
Sbjct: 283 -------CYAVLGLLHSQWKPLHGRFKDYISMPKVNGYQSLHTTV----MGPEGERIEIQ 331
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM LA G ASH YK
Sbjct: 332 IRTNEMHKLAEQGVASHWLYK 352
>gi|225874445|ref|YP_002755904.1| GTP pyrophosphokinase [Acidobacterium capsulatum ATCC 51196]
gi|225792335|gb|ACO32425.1| GTP pyrophosphokinase [Acidobacterium capsulatum ATCC 51196]
Length = 747
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 168/319 (52%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L VAL+LA++++D+ I+AGLL VE V+ + ++ G AH++ ++ +
Sbjct: 69 LEVALVLAEMKLDSTAIAAGLLHDAVEDTPVTAADIANQFGEQVAHIVEGVTKIDK---I 125
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ +D A +RK L D+R +++ LA RL MR L++L +Q I+ E + I+
Sbjct: 126 QFANREDRQAENVRKMLLAMVTDVRVVLIKLADRLHNMRTLEHLSAERQQAIARETLDIY 185
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + L ELEDLSFRY+ P+SY + + + + + + LL+ LK
Sbjct: 186 APLAHRLGMGKLRGELEDLSFRYVDPYSYDQLQLAVEERRSEGEQFLAGVEALLLEKLKE 245
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ A VQ R K +S KL K +++ D+L LRVI T+ V
Sbjct: 246 NKITA------RVQWRIKRLFSIHSKLQKSRSSVDQLYDLLALRVI---------TNSVP 290
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY +I S+W+ +P R KD+IA P+ N Y+SLH V G+ E+QIRTE
Sbjct: 291 D--CYAVLGLIHSIWRPVPGRIKDFIAMPRPNMYQSLHTTV----MGEGGHQFEVQIRTE 344
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 345 EMHRVAEEGIAAHWKYKAG 363
>gi|20807650|ref|NP_622821.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Thermoanaerobacter tengcongensis MB4]
gi|20516195|gb|AAM24425.1| Guanosine polyphosphate pyrophosphohydrolases/synthetases
[Thermoanaerobacter tengcongensis MB4]
Length = 718
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 117/354 (33%), Positives = 180/354 (50%), Gaps = 26/354 (7%)
Query: 85 LLFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGV 144
LL+KA ++ + + + + VA +LADL++D I+AGLL V+E GV
Sbjct: 21 LLYKAYNFAVKAHEG-QVRNSGEPYIVHPVEVAYILADLELDLTTIAAGLLHDVIEDTGV 79
Query: 145 SIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRKFCLTY-YDIRALILDL 203
+ Q+ + G A L+ ++ + K +V ++ A +RK + DIR +++ L
Sbjct: 80 TYDQLMEEFGKEIADLVDGVTKL-GKIEYKSKV--EQQAENMRKMLIAMAKDIRVILIKL 136
Query: 204 AIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLF 263
A RL MR L YLP +Q + E ++I+AP+AH + + + +ELEDL RYL P Y
Sbjct: 137 ADRLHNMRTLKYLPPDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLHPEEYYD 196
Query: 264 VDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDG 323
+ + + + I + ++ +K L ++ V GR K YS KK+
Sbjct: 197 LVEKVAAKRKEREEFI----QNIIATIK--QKLDEMGIPAEVDGRPKHFYSIYKKMKTQN 250
Query: 324 RIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKA 383
+ EE+ D+L +R+I VNT + CY I+ +LWK +P R KDYIA PK
Sbjct: 251 KTFEEIYDLLAIRII-------VNTV----KDCYGVLGIVHTLWKPIPGRFKDYIAMPKP 299
Query: 384 NGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
N Y+SLH V + G+ E+QIRT EM A G A+H YK G T +E
Sbjct: 300 NMYQSLHTTV-IGPKGEP---FEVQIRTWEMHKTAEYGIAAHWRYKEGKTTEDE 349
>gi|254479350|ref|ZP_05092687.1| RelA/SpoT family protein [Carboxydibrachium pacificum DSM 12653]
gi|214034716|gb|EEB75453.1| RelA/SpoT family protein [Carboxydibrachium pacificum DSM 12653]
Length = 720
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 117/354 (33%), Positives = 180/354 (50%), Gaps = 26/354 (7%)
Query: 85 LLFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGV 144
LL+KA ++ + + + + VA +LADL++D I+AGLL V+E GV
Sbjct: 23 LLYKAYNFAVKAHEG-QVRNSGEPYIVHPVEVAYILADLELDLTTIAAGLLHDVIEDTGV 81
Query: 145 SIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRKFCLTY-YDIRALILDL 203
+ Q+ + G A L+ ++ + K +V ++ A +RK + DIR +++ L
Sbjct: 82 TYDQLMEEFGKEIADLVDGVTKL-GKIEYKSKV--EQQAENMRKMLIAMAKDIRVILIKL 138
Query: 204 AIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLF 263
A RL MR L YLP +Q + E ++I+AP+AH + + + +ELEDL RYL P Y
Sbjct: 139 ADRLHNMRTLKYLPPDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLHPEEYYD 198
Query: 264 VDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDG 323
+ + + + I + ++ +K L ++ V GR K YS KK+
Sbjct: 199 LVEKVAAKRKEREEFI----QNIIATIK--QKLDEMGIPAEVDGRPKHFYSIYKKMKTQN 252
Query: 324 RIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKA 383
+ EE+ D+L +R+I VNT + CY I+ +LWK +P R KDYIA PK
Sbjct: 253 KTFEEIYDLLAIRII-------VNTV----KDCYGVLGIVHTLWKPIPGRFKDYIAMPKP 301
Query: 384 NGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
N Y+SLH V + G+ E+QIRT EM A G A+H YK G T +E
Sbjct: 302 NMYQSLHTTV-IGPKGEP---FEVQIRTWEMHKTAEYGIAAHWRYKEGKTTEDE 351
>gi|256847111|ref|ZP_05552557.1| GTP pyrophosphokinase [Lactobacillus coleohominis 101-4-CHN]
gi|256715775|gb|EEU30750.1| GTP pyrophosphokinase [Lactobacillus coleohominis 101-4-CHN]
Length = 745
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/326 (34%), Positives = 169/326 (51%), Gaps = 23/326 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD E + AG + +VE G ++ +++ G A ++ ++ +
Sbjct: 57 IQVAGILAELRMDPETVCAGYMHDIVEDTGATLDDIKEIFGPTIAMIVDGDTKISK---I 113
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ ++ A RK L DIR +I+ LA RL MR L++L +Q IS E ++I+
Sbjct: 114 HYKSNKEQMAETHRKLLLAMSKDIRVMIVKLADRLHNMRTLNHLRPDKQRRISNETLEIY 173
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+A + + + +ELEDLS RYL P Y + + S ID E + + K
Sbjct: 174 APIADRLGISTIKWELEDLSLRYLNPQQYYRIVHLMHSRRDQRVAYID---EAIKEVKKA 230
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
A L +L +V + GR K YS +K++ + E+ D+L +RV++
Sbjct: 231 TADL-NLGSNVEIYGRPKHIYSVYRKMVTQHKQFSEIYDLLAVRVVVDSI---------- 279
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
R CY I + W MP R KDYIA PKANGY+SLH V + G RPL EIQIRT
Sbjct: 280 -RDCYAVLGAIHTTWTPMPGRFKDYIAMPKANGYQSLHTTV-IGPEG--RPL-EIQIRTH 334
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEA 438
M +A G A+H YK G T+ +A
Sbjct: 335 HMHEVAEFGVAAHWAYKEGKTDGVQA 360
>gi|319892687|ref|YP_004149562.1| GTP pyrophosphokinase [Staphylococcus pseudintermedius HKU10-03]
gi|386319104|ref|YP_006015267.1| GTP pyrophosphokinase [Staphylococcus pseudintermedius ED99]
gi|317162383|gb|ADV05926.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Staphylococcus
pseudintermedius HKU10-03]
gi|323464275|gb|ADX76428.1| GTP pyrophosphokinase [Staphylococcus pseudintermedius ED99]
Length = 729
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/356 (31%), Positives = 181/356 (50%), Gaps = 41/356 (11%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++ +D I AG L V+E + V + + A ++ ++K +
Sbjct: 55 IQVAGILTEMHLDGPTIVAGFLHDVIEDTPYTFDDVAEMFNVEIATIVDGVTKLKK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 112 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLRAMPREKQIRISKETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED++ RY+ Y + ++ + + I E ++ ++
Sbjct: 172 APLAHRLGINTIKWELEDIALRYIDNVQYFRIVNLMKKKRSEREAYI----ENAIENIRK 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ + D+ D++ GR K YS +K++K + +++ D+L +RVI+ +
Sbjct: 228 EMDIMDIAGDIN--GRPKHIYSIYRKMMKQKKQFDQIFDLLAVRVIVHSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 278 ---CYAVLGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTV-VGPNGD--PL-EIQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGGLT----NPEEAKRLKAIMLAAAELAALRLKDIPSTNH 464
EM +A +G A+H YK G N K+L LKDI T+H
Sbjct: 331 EMHEIAEHGVAAHWAYKEGKQVDKDNENYNKKLNW------------LKDIAETDH 374
>gi|333897247|ref|YP_004471121.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333112512|gb|AEF17449.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 718
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/330 (34%), Positives = 175/330 (53%), Gaps = 35/330 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA++LADL++D I++GLL V+E +S + +++ G A L+ ++ +
Sbjct: 49 VEVAMILADLELDVSTIASGLLHDVIEDTSISYEDIKNEFGQEIADLVDGVTKL-GMIEY 107
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K +V ++ A +RK + DIR +++ LA RL MR L +L +Q + E ++I+
Sbjct: 108 KSKV--EQQAENMRKMLIAMAKDIRVIMIKLADRLHNMRTLKFLSEEKQKEKAQETLEIY 165
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLF----VDTWLRSHETGSKPLIDIYKEQLLQ 288
AP+AH + + + +ELEDLS RYL P Y V + E K LI+ KE+L +
Sbjct: 166 APIAHRLGMSMIKWELEDLSLRYLHPDEYYSLVEKVAKKRKEREESIKELIEKLKEKLNE 225
Query: 289 C-LKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVN 347
+K D V GR K YS KK+ + + E++ D++ +RVI VN
Sbjct: 226 IGIKAD-----------VDGRPKHFYSIYKKMKQQNKTFEQIYDLMAVRVI-------VN 267
Query: 348 TSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEI 407
T + CY T ++ +LWK MP R KDYIA PK N Y+SLH V + G+ EI
Sbjct: 268 TV----KDCYGTLGVVHTLWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGEP---FEI 319
Query: 408 QIRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
QIRT +M A G A+H YK G + +E
Sbjct: 320 QIRTWDMHRTAEYGIAAHWKYKEGKSYEDE 349
>gi|282881989|ref|ZP_06290630.1| GTP diphosphokinase [Peptoniphilus lacrimalis 315-B]
gi|281298019|gb|EFA90474.1| GTP diphosphokinase [Peptoniphilus lacrimalis 315-B]
Length = 711
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 173/321 (53%), Gaps = 25/321 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L VA++LAD+ MD+ I AGLL +E V+ + + + G A L+ ++K +N
Sbjct: 49 LHVAMILADMNMDSATIIAGLLHDTIEDTSVTYEDIEKKFGKEIAELVDGVTKLKK-LNY 107
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + ++ A +RK L DIR +I+ LA RL MR L+Y+ +++ + E ++I+
Sbjct: 108 KSKA--EKQAENIRKMVLAMAKDIRVIIVKLADRLHNMRTLEYMTEAKKIEKATETLEIY 165
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+A + + + +ELEDLS RYL P Y + + + LI+ ++ LK
Sbjct: 166 APIADRLGMSRVKWELEDLSLRYLDPDEYYKLVDMVNKRRKEREELIN----SIIDTLKV 221
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ + + GR K+ YS KK+ G++ +E+ D+ +R++ T+++
Sbjct: 222 NLERVGI--KCEINGRPKNFYSIYKKMKVKGKVFDEIYDLSAVRIL---------TNDI- 269
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY ++ +LWK +P R KDYIA PK N Y+SLH V + +NG+T E+QIRT
Sbjct: 270 -KDCYGALGVVHTLWKPIPGRFKDYIAMPKPNNYQSLHTTV-IDNNGET---FEVQIRTY 324
Query: 413 EMDMLAVNGTASHAFYKGGLT 433
+M A G A+H YK G T
Sbjct: 325 QMHQTAEYGIAAHWKYKTGQT 345
>gi|227514617|ref|ZP_03944666.1| GTP diphosphokinase [Lactobacillus fermentum ATCC 14931]
gi|227087028|gb|EEI22340.1| GTP diphosphokinase [Lactobacillus fermentum ATCC 14931]
Length = 744
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 144/483 (29%), Positives = 233/483 (48%), Gaps = 66/483 (13%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD E + AG + +VE G ++ +++ G A ++ ++ +
Sbjct: 55 IQVAGILAELKMDPETVCAGYMHDLVEDTGATLDDIKELFGPTIAMIVDGDTKISK---I 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ ++ A RK L DIR +I+ LA RL MR L +L +Q IS E ++I+
Sbjct: 112 HYKSNKEQMAETHRKLLLAMSKDIRVMIVKLADRLHNMRTLKHLRPDKQRRISNETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+A + + + +ELEDLS RYL P Y + + S ID Y ++ +KT
Sbjct: 172 APIADRLGISTIKWELEDLSLRYLNPQQYYRIVHLMNSRRDQR---ID-YISAAIKVVKT 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
DL +V + GR K YS +K++ + ++ D+L +RV++ +
Sbjct: 228 AIADLDLGPNVEIYGRPKHIYSVYRKMVTQHKQFSQIYDLLAIRVVVDSIKD-------- 279
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + W MP R KDYIA PKANGY+SLH V + G RPL EIQIRT
Sbjct: 280 ---CYAVLGAIHTSWTPMPGRFKDYIAMPKANGYQSLHTTV-IGPEG--RPL-EIQIRTH 332
Query: 413 EMDMLAVNGTASHAFYKGGLTN-----PEEAKRLKAIMLAAAELAALRLKDIPSTNH-KG 466
+M +A G A+H YK G TN +++K+L + E+ LR + + +G
Sbjct: 333 QMHEVAEYGVAAHWAYKEGKTNGVDQASQDSKKLNVV----KEILELRSESNGTDEFMQG 388
Query: 467 FEFD-WRDRVFRLLDKNGD------GRISIEELMEVMEELGAPGEDAR------------ 507
+ D + D+V+ K GD G ++ ++ E+G A+
Sbjct: 389 IQSDVFADKVYAFTPK-GDAIEMPKGAGPLDMAYQIHTEVGNHTTGAKVNGRIIPLNYEI 447
Query: 508 ---EMMQLLDSNSDGSLSSDEFDLF------QKQVEFMRNLEDRDD---EYRTMLDEKLQ 555
+++ +L S+S S D DL K +F R DR++ E R +++++L+
Sbjct: 448 KNGDIVDILTSSSSAGPSRDWMDLVSTRRARNKIRQFFRT-HDREENVIEGRRIMEQQLR 506
Query: 556 MAG 558
AG
Sbjct: 507 DAG 509
>gi|184155287|ref|YP_001843627.1| GTP pyrophosphokinase [Lactobacillus fermentum IFO 3956]
gi|385812253|ref|YP_005848644.1| GTP pyrophosphokinase [Lactobacillus fermentum CECT 5716]
gi|183226631|dbj|BAG27147.1| GTP pyrophosphokinase [Lactobacillus fermentum IFO 3956]
gi|299783150|gb|ADJ41148.1| GTP pyrophosphokinase [Lactobacillus fermentum CECT 5716]
Length = 744
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 144/483 (29%), Positives = 233/483 (48%), Gaps = 66/483 (13%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD E + AG + +VE G ++ +++ G A ++ ++ +
Sbjct: 55 IQVAGILAELKMDPETVCAGYMHDLVEDTGATLDDIKELFGPTIAMIVDGDTKISK---I 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ ++ A RK L DIR +I+ LA RL MR L +L +Q IS E ++I+
Sbjct: 112 HYKSNKEQMAETHRKLLLAMSKDIRVMIVKLADRLHNMRTLKHLRPDKQRRISNETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+A + + + +ELEDLS RYL P Y + + S ID Y ++ +KT
Sbjct: 172 APIADRLGISTIKWELEDLSLRYLNPQQYYRIVHLMNSRRDQR---ID-YISAAIKVVKT 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
DL +V + GR K YS +K++ + ++ D+L +RV++ +
Sbjct: 228 AIADLDLGPNVEIYGRPKHIYSVYRKMVTQHKQFSQIYDLLAIRVVVDSIKD-------- 279
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + W MP R KDYIA PKANGY+SLH V + G RPL EIQIRT
Sbjct: 280 ---CYAVLGAIHTSWTPMPGRFKDYIAMPKANGYQSLHTTV-IGPEG--RPL-EIQIRTH 332
Query: 413 EMDMLAVNGTASHAFYKGGLTN-----PEEAKRLKAIMLAAAELAALRLKDIPSTNH-KG 466
+M +A G A+H YK G TN +++K+L + E+ LR + + +G
Sbjct: 333 QMHEVAEYGVAAHWAYKEGKTNGVDQASQDSKKLNVV----KEILELRSESNGTDEFMQG 388
Query: 467 FEFD-WRDRVFRLLDKNGD------GRISIEELMEVMEELGAPGEDAR------------ 507
+ D + D+V+ K GD G ++ ++ E+G A+
Sbjct: 389 IQSDVFADKVYAFTPK-GDAIEMPKGAGPLDMAYQIHTEVGNHTTGAKVNGRIVPLNYEI 447
Query: 508 ---EMMQLLDSNSDGSLSSDEFDLF------QKQVEFMRNLEDRDD---EYRTMLDEKLQ 555
+++ +L S+S S D DL K +F R DR++ E R +++++L+
Sbjct: 448 KNGDIVDILTSSSSAGPSRDWMDLVSTRRARNKIRQFFRT-HDREENVIEGRRIMEQQLR 506
Query: 556 MAG 558
AG
Sbjct: 507 DAG 509
>gi|139437964|ref|ZP_01771517.1| Hypothetical protein COLAER_00504 [Collinsella aerofaciens ATCC
25986]
gi|133776161|gb|EBA39981.1| RelA/SpoT family protein [Collinsella aerofaciens ATCC 25986]
Length = 537
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/333 (36%), Positives = 175/333 (52%), Gaps = 28/333 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA++LADL+MD +V+ A LL VE S+ V G A L+ ++ N+
Sbjct: 83 VEVAIILADLKMDCDVVCAALLHDTVEDTETSLADVSGLFGDTVAELVDGVTKL---TNI 139
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
++ +D++ A LRK F DIR +I+ LA RL MR L L ++L + E M ++
Sbjct: 140 EVDSMDEKQALTLRKMFLAMSKDIRVIIVKLADRLHNMRTLAALREDRRLFKARETMDVY 199
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + + +ELEDLSF YL P +Y + + S+ + + Y + ++ L T
Sbjct: 200 APLADRLGMSSIKWELEDLSFFYLEPDAYQRIARMV----AESREVRERYLAETIKTL-T 254
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
D +ED + GR K +S +K+ + G+ E+ D++ LRVI T V
Sbjct: 255 DELNRIGLEDFQINGRSKHYWSIYQKMKRKGKEFSEIYDLVALRVI---------THSV- 304
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
R CY+T + +LW MP R KDYIA PK N Y+SLH V G T +EIQIRT
Sbjct: 305 -RDCYSTLGAVHTLWHPMPGRFKDYIAMPKVNNYQSLHTTV----IGPTARPLEIQIRTY 359
Query: 413 EMDMLAVNGTASHAFYK--GG--LTNPEEAKRL 441
EM A G A+H YK GG + +A+RL
Sbjct: 360 EMHEQAEYGIAAHWLYKKSGGSSASKTNDAQRL 392
>gi|121535597|ref|ZP_01667404.1| (p)ppGpp synthetase I, SpoT/RelA [Thermosinus carboxydivorans Nor1]
gi|121305837|gb|EAX46772.1| (p)ppGpp synthetase I, SpoT/RelA [Thermosinus carboxydivorans Nor1]
Length = 735
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/323 (35%), Positives = 173/323 (53%), Gaps = 25/323 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L VA +LADLQ+DA ISAGLL VVE V+++++ + G A L+ ++
Sbjct: 51 ITHPLGVAKILADLQIDALTISAGLLHDVVEDTPVTLEEIEKQFGKEIAMLVDGVTKLSR 110
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ + +++ + RK F DIR +++ LA RL MR L Y+P +Q I+ E
Sbjct: 111 ---MEYKSKEEQQLESYRKMFLAMAKDIRVVLIKLADRLHNMRTLKYMPPAKQKEIARET 167
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I APLA+ + + +ELEDL+FR+L P Y + ++ + LI+ + ++
Sbjct: 168 LEIFAPLANRLGIFSIKWELEDLAFRFLEPEKYYELVEKVKQKRQEREALIN----EAIK 223
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L T + +QGR K YS KK+ KD + E+ D+ +RVI+ +
Sbjct: 224 ILSERLTAMGI--KAEIQGRPKHFYSIYKKMQKDNKDLSEIYDLSAVRVIVDTIKD---- 277
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY I+ +LWK +P R KDYIA PK+N Y+SLH V + G+ PL EIQ
Sbjct: 278 -------CYAALGIVHTLWKPIPGRFKDYIAMPKSNMYQSLHTTV-IGLQGQ--PL-EIQ 326
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IRT EM + G A+H YK G
Sbjct: 327 IRTVEMHRTSEYGIAAHWRYKEG 349
>gi|290968824|ref|ZP_06560361.1| GTP diphosphokinase [Megasphaera genomosp. type_1 str. 28L]
gi|290781120|gb|EFD93711.1| GTP diphosphokinase [Megasphaera genomosp. type_1 str. 28L]
Length = 733
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/326 (33%), Positives = 169/326 (51%), Gaps = 25/326 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ L+VA +LAD+++DA I+A LL VVE + + + G A L+ ++
Sbjct: 53 IVHPLAVAQILADMKIDATTITASLLHDVVEDTAYMLDDIENLFGKEVAFLVDGVTKLNR 112
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L + +D+ ++RK F D+R +++ LA RL MR L ++ +Q IS E
Sbjct: 113 ---LDYRTKEDQQINSMRKMFLAMAKDVRVVVIKLADRLHNMRTLRFMRSDKQKRISQET 169
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I APLAH + + +ELEDLSFRYL P Y + ++ + +++ + ++
Sbjct: 170 LEIFAPLAHRLGIFNIKWELEDLSFRYLEPDKYYDLVDQMKQKRHVREEIVN----EAIE 225
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L+ T + + + GR K YS KK+ KD R +V D+ +R+I+ +
Sbjct: 226 VLRKALTASHI--QFEINGRPKHFYSIYKKMKKDNRDLSQVYDLYAIRIIVDTVQD---- 279
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY I+ SLWK +P+R KDYIA PK N Y+SLH V + G+ +EIQ
Sbjct: 280 -------CYGVLGIVHSLWKPLPYRFKDYIAMPKPNNYQSLHTTV-IGTRGQP---VEIQ 328
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTN 434
IRT EM +A G A+H YK G N
Sbjct: 329 IRTWEMHRVAEYGVAAHWRYKEGRAN 354
>gi|225850169|ref|YP_002730403.1| GTP pyrophosphokinase [Persephonella marina EX-H1]
gi|225646582|gb|ACO04768.1| GTP pyrophosphokinase [Persephonella marina EX-H1]
Length = 716
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 170/320 (53%), Gaps = 27/320 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRV-KNNVN 172
+ A +LADL++D I AGLL VVE +I ++++R G A ++ ++ K N N
Sbjct: 55 IEAAKVLADLKLDRTTIIAGLLHDVVEDTDTTIDEIKERFGETVALIVDGVTKIGKYNFN 114
Query: 173 LKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKI 231
K ++ A RK ++ DIR +++ LA RL +R LD LP Y+Q I+ E + I
Sbjct: 115 SK----EEAEAENFRKMLVSMAKDIRVILVKLADRLHNIRTLDPLPEYKQKRIAKETLDI 170
Query: 232 HAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLK 291
+APLA + + ELED SF+YL+P +Y + T+L +T + + Q+ L
Sbjct: 171 YAPLAARLGLWKIKAELEDTSFKYLYPEAYKKITTYLAESKTVQEKYLQEIISQIRDVLD 230
Query: 292 TDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEV 351
AD +Q R K YS +K L+ ++ DV G+RV LV+T
Sbjct: 231 KHNIKAD------IQYRAKHLYSIYEKTLRKDLSLSDIYDVYGVRV-------LVHTI-- 275
Query: 352 GERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRT 411
+ CY +I SLW +P R KDYI+ PK+N Y++LH V V+ GK +EIQI+T
Sbjct: 276 --KDCYLALGLIHSLWPPVPGRFKDYISLPKSNMYQALHTTV-VAPKGK---FVEIQIKT 329
Query: 412 EEMDMLAVNGTASHAFYKGG 431
+M +A G A+H YKGG
Sbjct: 330 YKMHRIAEEGIAAHWRYKGG 349
>gi|332981509|ref|YP_004462950.1| (p)ppGpp synthetase I SpoT/RelA [Mahella australiensis 50-1 BON]
gi|332699187|gb|AEE96128.1| (p)ppGpp synthetase I, SpoT/RelA [Mahella australiensis 50-1 BON]
Length = 719
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/320 (37%), Positives = 166/320 (51%), Gaps = 27/320 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VAL+LADL MDA I AGLL V+E + + G A L+ ++ L
Sbjct: 48 VQVALILADLGMDASTICAGLLHDVLEDTDYTYDDLAKLFGKEIADLVEGVTKLGK---L 104
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ Q + A LRK F D+R +++ LA RL MR L YL + QL + E M+I+
Sbjct: 105 EFQSKKEAQAENLRKMFIAMAKDVRVIMIKLADRLHNMRTLRYLDKESQLRNAQETMEIY 164
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYL-FVDTWLRSHETGSKPLIDIYKEQLLQCLK 291
APLAH + + +ELEDLS RYL P +Y VD + + Y Q++ LK
Sbjct: 165 APLAHRLGIFKIKWELEDLSLRYLDPEAYYDLVDKVAAKRKQREE-----YINQVITALK 219
Query: 292 TDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEV 351
+A+ + +V GR K YS KK+ G+ E++ D++ +RVI VNT
Sbjct: 220 E--RIAETGIEATVDGRPKHFYSIYKKMKYQGKAFEQIYDLMAVRVI-------VNTV-- 268
Query: 352 GERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRT 411
R CY +I ++WK +P R KDYIA PK N Y+SLH V V G+ +EIQ+RT
Sbjct: 269 --RDCYAVLGLIHTIWKPIPGRFKDYIAVPKPNMYQSLHTTV-VGPQGEP---VEIQVRT 322
Query: 412 EEMDMLAVNGTASHAFYKGG 431
+M A G A+H YK G
Sbjct: 323 WDMHRTAEYGIAAHWKYKEG 342
>gi|73662434|ref|YP_301215.1| GTP pyrophosphokinase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|418575969|ref|ZP_13140116.1| GTP pyrophosphokinase [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|72494949|dbj|BAE18270.1| GTP pyrophosphokinase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|379325717|gb|EHY92848.1| GTP pyrophosphokinase [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 729
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/340 (32%), Positives = 178/340 (52%), Gaps = 25/340 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++ +D I AG L V+E + V+ A ++ ++K +
Sbjct: 55 IQVAGILTEMHLDGPTIVAGFLHDVIEDTPYTFDDVKGMFNEEIAVIVEGVTKLKK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 112 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISKETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY Y + ++ + + Y + + +++
Sbjct: 172 APLAHRLGINTIKWELEDTALRYTDSVQYFRIVNLMKKKRSEREE----YIQNAINQIQS 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
D T ++V D++ GR K YS +K++K + +++ D+L +R+I+ N +N
Sbjct: 228 DLTSMNIVGDIN--GRPKHIYSIYRKMVKQKKQFDQIFDLLAIRIIV----NSIND---- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 278 ---CYAVLGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTV-VGPNGD--PL-EIQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELA 452
EM +A +G A+H YK G E+++ + ELA
Sbjct: 331 EMHEIAEHGVAAHWAYKEGKKVTEKSQNFNNKLNWIKELA 370
>gi|350566768|ref|ZP_08935408.1| GTP diphosphokinase [Peptoniphilus indolicus ATCC 29427]
gi|348661692|gb|EGY78374.1| GTP diphosphokinase [Peptoniphilus indolicus ATCC 29427]
Length = 493
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 174/321 (54%), Gaps = 25/321 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA++LA++ MD I AGLL +E V+ + V GI A+L+ ++K
Sbjct: 48 LNVAMILAEMNMDTPTIIAGLLHDTIEDTEVTFEDVEKNFGIEIAYLVDGVTKLKKLNYK 107
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
Q ++ A +RK L DIR +I+ LA RL MR L+Y+ ++ +LE ++I+
Sbjct: 108 NKQ---EKQAENIRKMVLAMAKDIRVIIVKLADRLHNMRTLEYMTDTKKHEKALETIEIY 164
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+A + + + +ELEDLS RY+ P Y + + + LI+ +++ LK
Sbjct: 165 APIADRLGMSKIKWELEDLSLRYIDPDKYYKLVDMVNKRRQEREDLIN----RIIAELKQ 220
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ T +V D++ GR K+ YS KK+ G+ EE+ D+ +RV+++ +
Sbjct: 221 NLTKLGIVADIN--GRPKNFYSIYKKMEYKGKNFEEIYDLSAVRVLVEDIKD-------- 270
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK +P R KDYIA PK N Y+SLH V + ++G+T E+QIRT
Sbjct: 271 ---CYGVLGVVHTLWKPIPGRFKDYIAMPKPNKYQSLHTTV-IDNHGET---FEVQIRTY 323
Query: 413 EMDMLAVNGTASHAFYKGGLT 433
EM A G A+H YK G++
Sbjct: 324 EMHQTAEYGIAAHWKYKAGVS 344
>gi|239908231|ref|YP_002954972.1| GTP pyrophosphokinase [Desulfovibrio magneticus RS-1]
gi|239798097|dbj|BAH77086.1| GTP pyrophosphokinase [Desulfovibrio magneticus RS-1]
Length = 740
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/337 (33%), Positives = 176/337 (52%), Gaps = 28/337 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L+ L A +LAD+++DA I++GLL VE ++ ++ + G A ++ ++
Sbjct: 46 LSHPLEAAGILADMRLDAASIASGLLHDTVEDTKATVDEIEELFGEEVADIVDGVTKISL 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + ++ A +RK L DIR +++ LA RL MR L++ ++Q +I+ E
Sbjct: 106 ---IPFETKEEAQAENIRKMILAMAEDIRVVLVKLADRLHNMRTLEFQKPHKQALIAQET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M I+APLA+ + + + ELED SFRYL P Y + + +H T + I+ L +
Sbjct: 163 MDIYAPLANRLGLHRIKTELEDWSFRYLKPDIYAQLVEGVATHHTVDETFIERVIGHLNE 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L + A +V GR K +S K+ G ++V+D++ RVI++
Sbjct: 223 LLGPNNIKARIV------GRRKHLWSVHNKMRVQGLTIDQVHDLVAFRVIVETI------ 270
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY ++ SLWK +P R KDYI+ PKAN Y+SLH V V G+ +EIQ
Sbjct: 271 -----RECYHVLGLVHSLWKPVPGRFKDYISMPKANMYQSLHTTV-VGPGGER---IEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYKG---GLTNPEEAKRLK 442
IRTEEM LA G A+H YK G NP++ +R +
Sbjct: 322 IRTEEMHRLAEEGVAAHWKYKERERGKFNPKDVERFQ 358
>gi|82701185|ref|YP_410751.1| (p)ppGpp synthetase SpoT/RelA [Nitrosospira multiformis ATCC 25196]
gi|82409250|gb|ABB73359.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Nitrosospira multiformis ATCC 25196]
Length = 715
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 166/321 (51%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ L+VA +L L++D++ ++A LL V+E VS ++ DR G A L+ ++
Sbjct: 58 ISHPLAVASILGKLRLDSQTLAAALLHDVMEDTHVSKAEIGDRFGKSVAELVDGVSKLDK 117
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ Q D A RK L D+R +++ LA RL MR L+ + ++ I+ E
Sbjct: 118 ---IEFQSHADAQAENFRKMLLAMARDVRVILIKLADRLHNMRTLEAMRPEKKRRIARET 174
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+AP+A+ + N + EL+DLSFRYL+P Y + R+ + ++ E + Q
Sbjct: 175 MEIYAPIANRLGLNNIYHELQDLSFRYLYPRRYRVLTNATRAARGNRREMVTKILETMKQ 234
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
LKT D V GR K YS KK+++ E+ D+ G RVI+K +
Sbjct: 235 RLKTAGL------DAEVTGREKQLYSIYKKMVEKHLSFSEILDIYGFRVIVKDVA----- 283
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
+CY + SL+ +P + KDYIA PKANGY+SLH + G +EIQ
Sbjct: 284 ------SCYIALGALHSLYNPIPGKFKDYIAIPKANGYQSLHSTL----WGPYGTPIEIQ 333
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM +A G ASH YK
Sbjct: 334 IRTPEMHRIAEAGVASHWLYK 354
>gi|340758948|ref|ZP_08695526.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium varium ATCC 27725]
gi|251835906|gb|EES64444.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium varium ATCC 27725]
Length = 726
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/366 (30%), Positives = 190/366 (51%), Gaps = 32/366 (8%)
Query: 69 NELTERMNVLSSSSSRLLFKALKLSIPMLQSLPLSPDSRSP---LTKALSVALLLADLQM 125
N E +N ++ ++ ++ + +KL++ + +S + + V +L D++M
Sbjct: 2 NYWEEIVNQINKNNLKVDLEKIKLALYFAEECHEGQYRKSGEDYIMHPVEVTKILIDMKM 61
Query: 126 DAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVN-LKLQVLDDETAA 184
D + I AG+L +VE +++ ++ G A L+ ++K+ N K Q DE
Sbjct: 62 DTDTIVAGILHDIVEDTLITLADIKYNFGDTVATLVDGVTKLKSLPNGTKKQ---DEN-- 116
Query: 185 ALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNY 243
+RK L ++R +I+ L+ RL MR L Y+ +Q+ IS E + I+APLAH +
Sbjct: 117 -IRKMILAMAQNLRVIIIKLSDRLHNMRTLKYMKPEKQIAISQETLDIYAPLAHRLGIAK 175
Query: 244 LSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDV 303
+ +ELEDL RYL P Y + + + S ++ + + +++ L +
Sbjct: 176 IKWELEDLCLRYLKPEEYEHIKSLIDSKRNERSEYVESFIKTIVKLLHDTGIKGN----- 230
Query: 304 SVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREII 363
V+GR+K YS KK+ + G+ +++ D++G+R+I+ E CY T +I
Sbjct: 231 -VKGRFKHFYSIYKKMYEKGKEFDDIYDLMGVRIIVDT-----------EGECYNTLGVI 278
Query: 364 QSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTA 423
S +K +P R KDYIA PK+N Y+S+H + V GK +EIQIRTEEMD +A G A
Sbjct: 279 HSHFKPVPGRFKDYIAVPKSNNYQSIHTTI-VGPQGK---FIEIQIRTEEMDRVAEEGIA 334
Query: 424 SHAFYK 429
+H YK
Sbjct: 335 AHWSYK 340
>gi|421074132|ref|ZP_15535173.1| RelA/SpoT family protein [Pelosinus fermentans JBW45]
gi|392527799|gb|EIW50884.1| RelA/SpoT family protein [Pelosinus fermentans JBW45]
Length = 736
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/345 (35%), Positives = 182/345 (52%), Gaps = 36/345 (10%)
Query: 98 QSLPLSPDSRSPLTKA---------LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQ 148
Q+ L+ D+ T+A L VA +LA+LQ+DA ISA LL VVE S+++
Sbjct: 30 QAYELAVDAHKGQTRASGEEYICHPLGVAKILAELQIDALTISASLLHDVVEDTAFSLEE 89
Query: 149 VRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRL 207
+ G A L+ ++ ++ + +++ RK F DIR +++ LA RL
Sbjct: 90 LEKLFGKEVAMLVDGVTKLSR---IEYKSKEEQQLENFRKMFLAMAKDIRVVLIKLADRL 146
Query: 208 DMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTW 267
MR L ++P ++Q IS E +I APLAH + + + +ELEDL+FRYL P Y +
Sbjct: 147 HNMRTLKHMPEHKQRRISQETHEIFAPLAHRLGISSVKWELEDLAFRYLEPEKYYELVEK 206
Query: 268 LRSHETGSKPLIDIYKEQLLQCLKTDATLADLVE-DVSVQGRYKSRYSTMKKLLKDGRIP 326
++ + LI+ + +K +T D VE +QGR K YS KK+LK +
Sbjct: 207 VKQKRREREQLIN-------EAIKILSTRLDDVEIKADIQGRPKHFYSIYKKMLKGNKDL 259
Query: 327 EEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGY 386
E+ D+ +R+ LV+T + CY ++ +LWK +P R KDYIA PK+N Y
Sbjct: 260 SEIYDLSAVRI-------LVDTV----KDCYGALGVVHTLWKPLPLRFKDYIAMPKSNMY 308
Query: 387 RSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGG 431
+SLH V +S G+ PL EIQIRT +M + G A+H YK G
Sbjct: 309 QSLHTTV-ISTEGQ--PL-EIQIRTMDMHRTSEYGIAAHWRYKEG 349
>gi|365840434|ref|ZP_09381623.1| GTP diphosphokinase [Anaeroglobus geminatus F0357]
gi|364561473|gb|EHM39373.1| GTP diphosphokinase [Anaeroglobus geminatus F0357]
Length = 734
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 169/323 (52%), Gaps = 33/323 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA +LAD+++D I+A L+ VVE +++ + G A L+ ++ L
Sbjct: 56 LAVAQILADMEIDTTTITASLMHDVVEDTTYTLEDMERLFGKEVAFLVDGVTKLNR---L 112
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ +D+ ++RK F D+R +++ LA RL MR L ++ +Q I+ E ++I+
Sbjct: 113 DYRTKEDQQVNSMRKMFLAMAKDVRVVVIKLADRLHNMRTLKFMRSEKQKRIAQETLEIY 172
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYL-FVDTWLRSHETGSKPL---IDIYKEQLLQ 288
APLAH + + +ELEDLSFRY+ P Y VD + + + ID+ KE
Sbjct: 173 APLAHRLGIFNIKWELEDLSFRYMEPDKYYDLVDQMKEKRQVREEIVNEAIDVLKE---- 228
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
TL++ + GR K YS KK+ KD R ++ D+ +RVI VNT
Sbjct: 229 ------TLSESGISFEINGRPKHFYSIYKKMKKDNRDLSQIYDLYAIRVI-------VNT 275
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
+ CY I+ SLWK +P+R KDYIA PK N Y+SLH V + G+ +EIQ
Sbjct: 276 VQ----DCYGVLGIVHSLWKPLPYRFKDYIAMPKPNNYQSLHTTV-IGTRGQP---VEIQ 327
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IRT EM +A G A+H YK G
Sbjct: 328 IRTWEMHHIAEYGVAAHWRYKEG 350
>gi|78044718|ref|YP_361036.1| GTP pyrophosphokinase [Carboxydothermus hydrogenoformans Z-2901]
gi|77996833|gb|ABB15732.1| GTP pyrophosphokinase [Carboxydothermus hydrogenoformans Z-2901]
Length = 716
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/323 (36%), Positives = 174/323 (53%), Gaps = 25/323 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LA LQMD E I+AGLL VVE +I+ + G A+L+ ++
Sbjct: 46 ITHPLAVAFILAGLQMDDETIAAGLLHDVVEDTAYTIEDIAREFGEEVANLVDGVTKLSR 105
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ + +++ LRK F DIR +++ LA RL MR L Y +Q I+ E
Sbjct: 106 ---IEFKNKEEQQVENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYHNPEKQKEIARET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I APLAH + + +ELEDL+FRYL P +Y D + +T +K + Y +Q++
Sbjct: 163 LEIFAPLAHRLGIYRIKWELEDLAFRYLDPDNYY--DIVEKIAKTRAKR--EQYIQQVIS 218
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L+ ++ ++GR K YS +K+ + + EV DV+ +RVI++
Sbjct: 219 ILEEKLKSYNI--KAKIEGRPKHLYSIFQKMREQQKDFSEVYDVMAVRVIVESV------ 270
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CYT II ++W +P R KDYIA PK+N Y+SLH V + G+ PL EIQ
Sbjct: 271 -----RDCYTVLGIIHTMWIPVPGRFKDYIAMPKSNMYQSLHTTV-IGPFGE--PL-EIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IRT EM A G A+H YK G
Sbjct: 322 IRTFEMHRTAEYGIAAHWRYKEG 344
>gi|284048851|ref|YP_003399190.1| (p)ppGpp synthetase I SpoT/RelA [Acidaminococcus fermentans DSM
20731]
gi|283953072|gb|ADB47875.1| (p)ppGpp synthetase I, SpoT/RelA [Acidaminococcus fermentans DSM
20731]
Length = 740
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/338 (36%), Positives = 179/338 (52%), Gaps = 43/338 (12%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L VA +LA LQMD ++A L VVE V++ Q+ D G A L+ ++
Sbjct: 57 LGVASILAQLQMDDVTLAAAFLHDVVEDTEVTLDQMEDIFGREVAMLVDGVTKLG----- 111
Query: 174 KLQVL--DDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMK 230
K++ + +++ RK F DIR +++ LA RL MR + ++P +Q IS E ++
Sbjct: 112 KIEYISREEQQVENYRKMFLAMAKDIRVVLIKLADRLHNMRTMKFMPVNKQKRISSETLE 171
Query: 231 IHAPLAHAVATNYLSFELEDLSFRYLFPFSY--LFVDTWLRSHETGSKPLIDIYKEQLLQ 288
I+APLAH + + +ELEDL+FRY+ P Y L ++ HE +E ++Q
Sbjct: 172 IYAPLAHRLGIYAIKWELEDLAFRYMEPQHYYELVEQVKVKRHE----------REAMVQ 221
Query: 289 CLKTDATLADLVE----DVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSN 344
+ L L E + +QGR KS YS KK+ +D + E+ D+L +RV
Sbjct: 222 --EAMDELRKLCEESGINCQIQGRPKSFYSIYKKMQRDHKTINEIYDLLAVRV------- 272
Query: 345 LVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPL 404
LV+T + CY I+ WK +P R KDYIA PK+NGY+SLH V VS +G+ PL
Sbjct: 273 LVDTV----KDCYGVLGIVHGKWKPIPGRFKDYIAVPKSNGYQSLHTTV-VSSSGQ--PL 325
Query: 405 MEIQIRTEEMDMLAVNGTASHAFYK--GGLTNPEEAKR 440
EIQIRT EM ++ G A+H YK GG P + +
Sbjct: 326 -EIQIRTFEMHKVSEYGVAAHWRYKESGGSKMPSSSDK 362
>gi|227513277|ref|ZP_03943326.1| GTP diphosphokinase [Lactobacillus buchneri ATCC 11577]
gi|227083478|gb|EEI18790.1| GTP diphosphokinase [Lactobacillus buchneri ATCC 11577]
Length = 743
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/326 (35%), Positives = 171/326 (52%), Gaps = 25/326 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T + VA +LADL MD E +S+G L VVE G + V++ G A ++ ++
Sbjct: 50 ITHPIQVAGILADLHMDPETVSSGFLHDVVEDTGAELSDVQELFGNDVALIVDGVTKLSK 109
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+K + ++ A RK L DIR +I+ LA RL MR L L +Q I+ E
Sbjct: 110 ---IKYKSSEERLAENHRKLLLAMCKDIRVMIVKLADRLHNMRTLKSLRPDKQRRIAKET 166
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A + + +ELED+S RYL P Y + + S +D Y ++ +
Sbjct: 167 LEIYAPIADRLGIGTIKWELEDISLRYLNPQQYYRIVHLMNSRRDQR---VD-YIQKAIN 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+K+ ++DL + GR K YS KK++ + ++ D+L +RVI++ +
Sbjct: 223 EVKS--AISDLDIKSEIYGRPKHIYSVYKKMVDKHKQFSQIYDLLAIRVIVQSIKD---- 276
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY I + WK MP R KDYIA PKAN Y+SLH V + GK PL E+Q
Sbjct: 277 -------CYAVLGAIHTEWKPMPGRFKDYIAMPKANMYQSLHTTV-IGPEGK--PL-EVQ 325
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTN 434
IRTEEM +A G A+H YK G+TN
Sbjct: 326 IRTEEMHRVAEFGIAAHWAYKEGITN 351
>gi|257784325|ref|YP_003179542.1| (p)ppGpp synthetase I SpoT/RelA [Atopobium parvulum DSM 20469]
gi|257472832|gb|ACV50951.1| (p)ppGpp synthetase I, SpoT/RelA [Atopobium parvulum DSM 20469]
Length = 781
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/322 (35%), Positives = 167/322 (51%), Gaps = 25/322 (7%)
Query: 110 LTKALSVALLLA-DLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVK 168
+ + VAL+LA DL MD + I A L+ VE S+ ++ R G A L+ ++
Sbjct: 60 INHPVEVALILAHDLHMDEDTICAALMHDTVEDTSASLDEISSRFGKSVAELVDGVTKL- 118
Query: 169 NNVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLE 227
++++ +D++ A LRK F DIR +I+ LA RL MR L LP ++L + E
Sbjct: 119 --TSIEVSSMDEKQALNLRKMFLAMSKDIRVVIIKLADRLHNMRTLAALPPDRRLFKARE 176
Query: 228 VMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLL 287
M ++APLA + + + +ELEDLSF +L P Y V + + ++ K+ L
Sbjct: 177 TMDVYAPLADRLGISSVKWELEDLSFFWLEPEEYQRVARMVSDSRAQRENDLNNAKKTL- 235
Query: 288 QCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVN 347
TD A + D + GR K +S +K+++ GR + D++ LRVI
Sbjct: 236 ----TDELNAAGITDFQITGRPKHLWSIYQKMVRKGREFSNIYDLIALRVI--------- 282
Query: 348 TSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEI 407
T VG+ CY+ I +LW MP R KDYIA PKAN Y+SLH V D RP+ EI
Sbjct: 283 TKNVGD--CYSALGAIHALWHPMPGRFKDYIATPKANLYQSLHTTVIGPDG---RPI-EI 336
Query: 408 QIRTEEMDMLAVNGTASHAFYK 429
QIRT EM + G A+H YK
Sbjct: 337 QIRTAEMHEASEYGIAAHWLYK 358
>gi|227510270|ref|ZP_03940319.1| GTP diphosphokinase [Lactobacillus brevis subsp. gravesensis ATCC
27305]
gi|227189922|gb|EEI69989.1| GTP diphosphokinase [Lactobacillus brevis subsp. gravesensis ATCC
27305]
Length = 743
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/326 (35%), Positives = 171/326 (52%), Gaps = 25/326 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T + VA +LADL MD E +S+G L VVE G + V++ G A ++ ++
Sbjct: 50 ITHPIQVAGILADLHMDPETVSSGFLHDVVEDTGAELSDVQELFGNDVALIVDGVTKLSK 109
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+K + ++ A RK L DIR +I+ LA RL MR L L +Q I+ E
Sbjct: 110 ---IKYKSSEERLAENHRKLLLAMCKDIRVMIVKLADRLHNMRTLKSLRPDKQRRIAKET 166
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A + + +ELED+S RYL P Y + + S +D Y ++ +
Sbjct: 167 LEIYAPIADRLGIGTIKWELEDISLRYLNPQQYYRIVHLMNSRRDQR---VD-YIQKAIN 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+K+ ++DL + GR K YS KK++ + ++ D+L +RVI++ +
Sbjct: 223 EVKS--AISDLDIKSEIYGRPKHIYSVYKKMVDKHKQFSQIYDLLAIRVIVQSIKD---- 276
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY I + WK MP R KDYIA PKAN Y+SLH V + GK PL E+Q
Sbjct: 277 -------CYAVLGAIHTEWKPMPGRFKDYIAMPKANMYQSLHTTV-IGPEGK--PL-EVQ 325
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTN 434
IRTEEM +A G A+H YK G+TN
Sbjct: 326 IRTEEMHRVAEFGIAAHWAYKEGITN 351
>gi|296132724|ref|YP_003639971.1| (p)ppGpp synthetase I SpoT/RelA [Thermincola potens JR]
gi|296031302|gb|ADG82070.1| (p)ppGpp synthetase I, SpoT/RelA [Thermincola potens JR]
Length = 722
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 119/326 (36%), Positives = 171/326 (52%), Gaps = 26/326 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
LSVA +LADL++D I+AGLL VVE ++ + ++ G+ A LL + + + ++
Sbjct: 49 LSVAHILADLELDVVTIAAGLLHDVVEDTDSPLETIEEKFGVEIA-LLVDGVTKLSRISY 107
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K ++ ++ LRK F DIR +++ LA RL MR L +L +Q IS E ++I
Sbjct: 108 KNKM--EQQVENLRKMFLAMAKDIRVILIKLADRLHNMRTLKHLAEPKQKEISEETLEIF 165
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + +ELEDL+ RYL P Y + + + I + L + L+
Sbjct: 166 APLAHRLGIFKIKWELEDLALRYLEPKKYYELVDGIAQKRAEREEYIARVTQILAEKLEN 225
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
AD +QGR K YS KK+L+ + E+ D+L +RVI+ +
Sbjct: 226 VGIKAD------IQGRPKHFYSIYKKMLEQQKELAEIYDLLAVRVIVDTVKD-------- 271
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II +LWK +P R KDYIA PK+N Y+SLH V + NG+ EIQIRT
Sbjct: 272 ---CYGALGIIHTLWKPIPGRFKDYIAMPKSNMYQSLHTTV-IGPNGEP---FEIQIRTW 324
Query: 413 EMDMLAVNGTASHAFYK-GGLTNPEE 437
EM A G A+H YK GG EE
Sbjct: 325 EMHRTAEYGIAAHWRYKEGGGRGDEE 350
>gi|335048883|ref|ZP_08541895.1| GTP diphosphokinase [Megasphaera sp. UPII 199-6]
gi|333764666|gb|EGL42052.1| GTP diphosphokinase [Megasphaera sp. UPII 199-6]
Length = 733
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/326 (33%), Positives = 168/326 (51%), Gaps = 25/326 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ L+VA +LAD+++DA I+A LL VVE + + G A L+ ++
Sbjct: 53 IVHPLAVAQILADMKIDATTITASLLHDVVEDTAYMLDDIEKLFGKEVAFLVDGVTKLNR 112
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L + +D+ ++RK F D+R +++ LA RL MR L ++ +Q IS E
Sbjct: 113 ---LDYRTKEDQQINSMRKMFLAMAKDVRVVVIKLADRLHNMRTLRFMRSDKQKRISQET 169
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I APLAH + + +ELEDLSFRYL P Y + ++ + +++ + ++
Sbjct: 170 LEIFAPLAHRLGIFNIKWELEDLSFRYLEPDKYYDLVDQMKQKRHVREEIVN----EAIE 225
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L+ T + + + GR K YS KK+ KD R +V D+ +R+I+ +
Sbjct: 226 VLRKALTASHI--QFEINGRPKHFYSIYKKMKKDNRDLSQVYDLYAIRIIVDTVQD---- 279
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY I+ SLWK +P+R KDYIA PK N Y+SLH V + G+ +EIQ
Sbjct: 280 -------CYGVLGIVHSLWKPLPYRFKDYIAMPKPNNYQSLHTTV-IGTRGQP---VEIQ 328
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTN 434
IRT EM +A G A+H YK G N
Sbjct: 329 IRTWEMHRVAEYGVAAHWRYKEGRAN 354
>gi|317052498|ref|YP_004113614.1| RelA/SpoT family protein [Desulfurispirillum indicum S5]
gi|316947582|gb|ADU67058.1| RelA/SpoT family protein [Desulfurispirillum indicum S5]
Length = 726
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 115/348 (33%), Positives = 178/348 (51%), Gaps = 29/348 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ L+VA LLA + +D I+AGLL +E + ++++ + G A L+ +++
Sbjct: 49 ISHPLAVAYLLATMNLDPYTITAGLLHDTIEDTTATFEELQQQFGHDVAFLVDGVTKIET 108
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
V K D A LRK + DIR L++ LA RL +R L+Y+P ++ I+ E
Sbjct: 109 MVG-KSNKSSDVKAETLRKMLIAMAKDIRVLLIKLADRLHNIRTLEYMPEEKRKAIAQET 167
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+APLAH + N++ ELED S + P ++ + + E K +D +L+
Sbjct: 168 LDIYAPLAHRLGINWMKTELEDRSLEHFDPETFAMIRNEVEPREGDRKSYVD----ELIA 223
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ LA L V GR K +S KK+ + P+E+ D+L LRV+ + S+
Sbjct: 224 --RISEHLASLGITCEVHGRPKHYFSIYKKIKRQNVSPKELFDLLALRVVTEKVSD---- 277
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY I LW+ +P+R KDYI PK+N Y+SLH V + K +E Q
Sbjct: 278 -------CYLVLGEIHRLWRAVPNRLKDYITNPKSNLYQSLHTTVIGPEGLK----VEFQ 326
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPE--EAKR---LKAIMLAAAEL 451
IRT EM +A G A+H YK G+ +PE E +R LK+I+ AE
Sbjct: 327 IRTAEMHKIAEEGIAAHWAYKEGV-HPENDETQRFAWLKSILEGGAEF 373
>gi|116333375|ref|YP_794902.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus brevis ATCC 367]
gi|116098722|gb|ABJ63871.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus brevis ATCC 367]
Length = 744
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/324 (34%), Positives = 169/324 (52%), Gaps = 29/324 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL MD E +SAG L +VE G ++ VR+ G A ++ ++ +
Sbjct: 55 IQVAGILADLNMDPETVSAGFLHDIVEDTGATLGDVRELFGDDVALIVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + ++ A RK L DIR +I+ LA RL MR L++L +Q I+ E ++I+
Sbjct: 112 KYKSNREQLAENHRKLLLAMSKDIRVMIVKLADRLHNMRTLEHLRPDKQRRIANETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + + +ELED+S RYL P Y + + S +EQ +
Sbjct: 172 APLADRLGISTIKWELEDVSLRYLNPQQYYRIVHLMNSRRD--------QREQYIAGAIK 223
Query: 293 D--ATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSE 350
D A+++DL D + GR K YS +K+ + ++ D+L +RVI+ +
Sbjct: 224 DIQASISDLKIDPEIYGRPKHIYSVYRKMKDQHKQFSQIYDLLAIRVIVDTIKD------ 277
Query: 351 VGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIR 410
CY I S WK MP R KDYIA PKAN Y+SLH V + GK+ +E+QIR
Sbjct: 278 -----CYAVLGAIHSQWKPMPGRFKDYIAMPKANMYQSLHTTV-IGPEGKS---LEVQIR 328
Query: 411 TEEMDMLAVNGTASHAFYKGGLTN 434
T+EM +A G A+H YK G+ +
Sbjct: 329 TKEMHAVAEYGVAAHWAYKEGVKD 352
>gi|452821782|gb|EME28808.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Galdieria
sulphuraria]
Length = 776
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 122/381 (32%), Positives = 191/381 (50%), Gaps = 26/381 (6%)
Query: 68 FNELTERMNVLSSSSSRLLFKALKLSIPMLQSLPLSP-DSRSP-LTKALSVALLLADLQM 125
+++L ++ S+S R++ AL+L+ Q+ L S P +T ++VA +LA+L+M
Sbjct: 88 WSQLETQLTYHSTSDLRVIKSALQLA---YQAHELQKRHSGDPFITHPVAVANILAELRM 144
Query: 126 DAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAA 185
D + I AGLL VE V++ + G+ ++ +V + + D+ A
Sbjct: 145 DRDTIVAGLLHDTVEDTEVTLSTIEQLFGMEVRRIVEGETKVSKLPKMA-DISIDKQAEN 203
Query: 186 LRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYL 244
LR+ F D R +I+ LA RL MR L ++ + ++ I+ E + I APLAH + +
Sbjct: 204 LRQLFIAMTEDWRIIIVKLADRLHNMRTLQFMKQAKRHKIAKETLDIFAPLAHRLGMWQI 263
Query: 245 SFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVS 304
ELE L F YL+P Y + + +++ ++ L L+ D L V V
Sbjct: 264 KAELERLGFMYLYPSEYEEIRQLVEKKLPKYMRVLEESRQALKTALQNDVILQQSVAQVE 323
Query: 305 VQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKP--------SSNLVNTSEVGERA- 355
V R K YS KK+ + G+ E++ D++ LRV+I P SS+ +E +
Sbjct: 324 VSARIKELYSLWKKMQQHGKDIEDIYDLVALRVLITPKPMQLECCSSDASQCNEWNRKML 383
Query: 356 -------CYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY T I+ ++W+ P R KDYIA PK NGY+SLH V G PL E+Q
Sbjct: 384 ETLEKSLCYYTLGIVHAMWQPFPCRVKDYIAFPKENGYQSLHTT--VMAGGAQAPL-EVQ 440
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM ++A G A+H YK
Sbjct: 441 IRTLEMHLVAEYGMAAHWMYK 461
>gi|417885550|ref|ZP_12529704.1| GTP diphosphokinase [Lactobacillus oris F0423]
gi|341595472|gb|EGS38121.1| GTP diphosphokinase [Lactobacillus oris F0423]
Length = 745
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 111/343 (32%), Positives = 177/343 (51%), Gaps = 23/343 (6%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+LQMD E ++AG L +VE G ++ +++ G A ++ ++ +
Sbjct: 55 IQVAGILANLQMDPETVAAGYLHDIVEDTGATLDDIKELFGPTIAMIVDGDTKLGK---I 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + ++ AA RK L DIR +I+ LA RL MR L +L +Q IS E ++I+
Sbjct: 112 QYKSNKEQMAATHRKLLLAMSKDIRVMIVKLADRLHNMRTLKHLRPDKQRRISNETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+A + + + +ELEDLS RYL P Y + + S I+ + ++ +K
Sbjct: 172 APIADRLGISTIKWELEDLSLRYLNPQQYYRIVHLMNSRRDQRVDSIN----RSIKLIKK 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ DL +V + GR K YS +K++ + ++ D+L +R+++ +
Sbjct: 228 AISDLDLGPNVEIYGRPKHIYSIYRKMVTQHKQFSQIYDLLAIRIVVDTIKD-------- 279
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKANGY+SLH + + G RPL E+QIRT
Sbjct: 280 ---CYAALGAIHTNWKPMPGRFKDYIAMPKANGYQSLHTTI-IGPEG--RPL-EVQIRTH 332
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALR 455
M +A G A+H YK G T+ + R + E+ +R
Sbjct: 333 HMHQVAEFGVAAHWAYKEGKTDGVQQTRDSQKLNVVKEILEMR 375
>gi|414154562|ref|ZP_11410880.1| GTP pyrophosphokinase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411453959|emb|CCO08784.1| GTP pyrophosphokinase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 723
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/319 (33%), Positives = 175/319 (54%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+++++LA+LQ+D + ++AGLL VVE G+++ + + G A+++ ++ L
Sbjct: 50 LAISIILAELQLDVQTVAAGLLHDVVEDTGITLADIENNFGAEVANMVDGVTKLGK---L 106
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ Q ++ A LRK F DIR +++ LA RL +R L + +Q ++ E +
Sbjct: 107 QYQTKEERQAENLRKMFLAMAKDIRVILIKLADRLHNLRTLQFQSERKQKEVAEETLHFF 166
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+AH + + +ELEDLSFRYL P Y +++ S+ + Y + +++ L
Sbjct: 167 APMAHRLGIYKIKWELEDLSFRYLEPEQY----QRMKAQIAKSRAKREEYIQGVIKELAE 222
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
LA + +QGR K+ YS +K+++ + +++ DV +RV LVN+
Sbjct: 223 --KLAAVNIKAEIQGRPKNLYSIYQKMIEQQKELKDIFDVQAVRV-------LVNSV--- 270
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY I +LWK +P R KDYIA PK+N Y+SLH V + NG+ +EIQIRT
Sbjct: 271 -KDCYGALGIAHTLWKPIPGRFKDYIAMPKSNMYQSLHTTV-IGPNGEP---VEIQIRTW 325
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 326 EMHRVAEYGIAAHWRYKEG 344
>gi|390934796|ref|YP_006392301.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389570297|gb|AFK86702.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 718
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/330 (34%), Positives = 175/330 (53%), Gaps = 35/330 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA++LADL++D I++GLL V+E ++ + +++ G A L+ ++ +
Sbjct: 49 VEVAMILADLELDVSTIASGLLHDVIEDTSITYEDIKNEFGQEIADLVDGVTKL-GMIEY 107
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K +V ++ A +RK + DIR +++ LA RL MR L +L +Q + E ++I+
Sbjct: 108 KSKV--EQQAENMRKMLIAMAKDIRVIMIKLADRLHNMRTLKFLSEEKQKEKAQETLEIY 165
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLF----VDTWLRSHETGSKPLIDIYKEQLLQ 288
AP+AH + + + +ELEDLS RYL P Y V + E K LI+ KE+L +
Sbjct: 166 APIAHRLGMSMIKWELEDLSLRYLHPDEYYSLVEKVAKKRKEREESIKELIEKLKEKLNE 225
Query: 289 C-LKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVN 347
+K D V GR K YS KK+ + + E++ D++ +RVI VN
Sbjct: 226 IGIKAD-----------VDGRPKHFYSIYKKMKQQNKTFEQIYDLMAVRVI-------VN 267
Query: 348 TSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEI 407
T + CY T ++ +LWK MP R KDYIA PK N Y+SLH V + G+ EI
Sbjct: 268 TV----KDCYGTLGVVHTLWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGEP---FEI 319
Query: 408 QIRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
QIRT +M A G A+H YK G + +E
Sbjct: 320 QIRTWDMHRTAEYGIAAHWKYKEGKSYEDE 349
>gi|258405012|ref|YP_003197754.1| (p)ppGpp synthetase I SpoT/RelA [Desulfohalobium retbaense DSM
5692]
gi|257797239|gb|ACV68176.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfohalobium retbaense DSM
5692]
Length = 733
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/323 (33%), Positives = 170/323 (52%), Gaps = 25/323 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L+ L VA +LA+L++DA I+AGLL +E ++ + ++ G A ++ ++
Sbjct: 46 LSHPLEVAHILAELRLDAPTIAAGLLHDTLEDTQSNVSDLEEQFGEEVAQIVEGVTKIGK 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ ++ A +RK L DIR +I+ LA RL MR L + +Q +IS E
Sbjct: 106 ---VRFTSKEEAQAENIRKMILAMAEDIRVIIVKLADRLHNMRTLQHQKGIKQRLISQET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLA+ + + +LED+SF+YL P Y + + + H+T + I+ L+Q
Sbjct: 163 MEIYAPLANRLGLYRVKVQLEDISFQYLRPDVYYQIKSGVEQHQTLGQQYIERVT-GLIQ 221
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ + ++ V GR K YS K+ + G ++V+D++ RVI+K
Sbjct: 222 SILDENSIPG-----RVSGRQKHLYSIFHKMQRQGLSLDQVHDLVAFRVILKSV------ 270
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY +I S+WK +P R KDYI+ PKAN Y+SLH V D + +EIQ
Sbjct: 271 -----RDCYAVLGLIHSIWKPVPGRFKDYISMPKANMYQSLHTTVIGPDGER----IEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IRTEEM + G A+H YK G
Sbjct: 322 IRTEEMHEINEYGIAAHWKYKDG 344
>gi|167771535|ref|ZP_02443588.1| hypothetical protein ANACOL_02905 [Anaerotruncus colihominis DSM
17241]
gi|167666175|gb|EDS10305.1| RelA/SpoT family protein [Anaerotruncus colihominis DSM 17241]
Length = 728
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/326 (32%), Positives = 171/326 (52%), Gaps = 25/326 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ ++VA++L DL MD+E I A LL VVE ++ + V + G A L++ ++
Sbjct: 48 ISHPIAVAIILVDLGMDSECIQAALLHDVVEDTDITSEAVEKQFGTDVALLVNGVTKLGK 107
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ +++ A +RK L D+R +I+ LA RL MR ++ +P ++ +LE
Sbjct: 108 ---ISFTSREEQQAENVRKMLLAMAQDVRVIIIKLADRLHNMRTIEVMPEQKRRDKALET 164
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+++APLAH + + ELED+S RYL P +Y +++ L + ++ K+++ +
Sbjct: 165 MEVYAPLAHRLGIRAVKEELEDISLRYLDPVAYHEIESMLELKRADRQSFLEKIKDKIRE 224
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
LA D+ V GR KS Y +K+ G+ EE+ D+ +R+I+ + VN
Sbjct: 225 ------RLAAEYNDIYVDGRVKSVYGIYRKMYIQGKAFEEIFDIYAVRIIV----DSVNE 274
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY II L++ +P+R KDYI+ PK N Y+SLH V K E+Q
Sbjct: 275 -------CYNILGIIHDLFRPLPNRFKDYISTPKPNMYQSLHTTV----IDKEAIPFEVQ 323
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTN 434
IRT +M A G A+H YK G+T
Sbjct: 324 IRTWDMHHTAEYGIAAHWKYKAGVTG 349
>gi|315645801|ref|ZP_07898922.1| (p)ppGpp synthetase I, SpoT/RelA [Paenibacillus vortex V453]
gi|315278562|gb|EFU41876.1| (p)ppGpp synthetase I, SpoT/RelA [Paenibacillus vortex V453]
Length = 725
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 165/319 (51%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA ++ ++Q+D I A LL VVE VS++Q+R+R G A L+ +++ +
Sbjct: 49 LAVADIVVNMQVDTLSIIAALLHDVVEDTTVSLEQIRERFGDTCAMLVDGLTKLER---I 105
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ RK F DIR +++ LA RL MR L Y Q IS E ++I
Sbjct: 106 QFRSKEEQQNENYRKMFIAMARDIRVIVIKLADRLHNMRTLKYQSEESQRRISYETLEIF 165
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
P+AH + + + +E+ED++ RYL P Y + + + ID ++ C++
Sbjct: 166 CPIAHRLGISAIKWEMEDIALRYLNPQQYYRIANLMHKKRAEREQYID----NVIVCIRE 221
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ D+S GR K YS KK+ + E+ D+L +R+I+ N+
Sbjct: 222 KLDEMGIQADLS--GRPKHIYSVFKKMTVKNKQFNEIYDLLAIRIIV---DNI------- 269
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY T II +LWK MP R KDYIA PK N Y+SLH V V NG+ E+QIRT
Sbjct: 270 -KDCYATLGIIHTLWKPMPGRFKDYIAMPKTNMYQSLHTTV-VGPNGEP---TEVQIRTW 324
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM A G A+H YK G
Sbjct: 325 EMHRTAEFGIAAHWAYKEG 343
>gi|331701363|ref|YP_004398322.1| (p)ppGpp synthetase I SpoT/RelA [Lactobacillus buchneri NRRL
B-30929]
gi|406026925|ref|YP_006725757.1| GTP pyrophosphokinase [Lactobacillus buchneri CD034]
gi|329128706|gb|AEB73259.1| (p)ppGpp synthetase I, SpoT/RelA [Lactobacillus buchneri NRRL
B-30929]
gi|405125414|gb|AFS00175.1| putative GTP pyrophosphokinase [Lactobacillus buchneri CD034]
Length = 742
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 121/368 (32%), Positives = 183/368 (49%), Gaps = 29/368 (7%)
Query: 68 FNELTERMNVLSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMDA 127
N+++E MN R ++ K++ + P +T VA +LADL MD
Sbjct: 12 INKVSEYMNKEHVDEIRKAYQFAKIAHQYQKRQSGEP----YITHPTQVAGILADLHMDP 67
Query: 128 EVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAALR 187
E +SAG L VVE G ++ +++ G A ++ ++ +K + ++ A R
Sbjct: 68 ETVSAGFLHDVVEDTGATLGDIQELFGHDIALIVDGVTKLSK---IKYKSSEERLAENHR 124
Query: 188 KFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSF 246
K L DIR +I+ LA RL MR L L +Q I+ E ++I+AP+A + + +
Sbjct: 125 KLLLAMCKDIRVMIVKLADRLHNMRTLKSLRPDKQRRIASETLEIYAPIADRLGIGTIKW 184
Query: 247 ELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQ 306
ELED+S RYL P Y + + S +D ++ + + K + L E +
Sbjct: 185 ELEDISLRYLNPQQYYRIVHLMNSRRDQR---VDYIEKAIKEVKKAISALGVKAE---IY 238
Query: 307 GRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSL 366
GR K YS +K+++ + ++ D+L +RVI+ + CY I S
Sbjct: 239 GRPKHIYSVYRKMVEKHKQFSQIYDLLAIRVIVDSIKD-----------CYAVLGAIHSE 287
Query: 367 WKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHA 426
WK MP R KDYIA PKAN Y+SLH V + GK PL E+QIRTEEM +A G A+H
Sbjct: 288 WKPMPGRFKDYIAMPKANMYQSLHTTV-IGPEGK--PL-EVQIRTEEMHRVAEFGIAAHW 343
Query: 427 FYKGGLTN 434
YK G+TN
Sbjct: 344 AYKEGITN 351
>gi|259503164|ref|ZP_05746066.1| GTP diphosphokinase [Lactobacillus antri DSM 16041]
gi|259168879|gb|EEW53374.1| GTP diphosphokinase [Lactobacillus antri DSM 16041]
Length = 745
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 172/328 (52%), Gaps = 23/328 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+LQMD E ++AG L +VE G ++ +++ G A ++ ++ +
Sbjct: 55 IQVAGILANLQMDPETVAAGYLHDIVEDTGATLDDIKELFGPTIAMIVDGDTKLGK---I 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + ++ AA RK L DIR +I+ LA RL MR L +L +Q IS E ++I+
Sbjct: 112 QYKSNKEQMAATHRKLLLAMSKDIRVMIVKLADRLHNMRTLKHLRPDKQRRISNETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+A + + + +ELEDLS RYL P Y + + S I+ + ++ +K
Sbjct: 172 APIADRLGISTIKWELEDLSLRYLNPQQYYRIVHLMNSRRDQRVDSIN----RSIKLIKK 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ DL +V + GR K YS +K++ + ++ D+L +R+++ +
Sbjct: 228 AISDLDLGPNVEIYGRPKHIYSIYRKMVTQHKQFSQIYDLLAIRIVVDTIKD-------- 279
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKANGY+SLH + + G RPL E+QIRT
Sbjct: 280 ---CYAALGAIHTNWKPMPGRFKDYIAMPKANGYQSLHTTI-IGPEG--RPL-EVQIRTH 332
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKR 440
M +A G A+H YK G T+ + R
Sbjct: 333 HMHQVAEFGVAAHWAYKEGKTDGVQQTR 360
>gi|374264055|ref|ZP_09622600.1| hypothetical protein LDG_9071 [Legionella drancourtii LLAP12]
gi|363535622|gb|EHL29071.1| hypothetical protein LDG_9071 [Legionella drancourtii LLAP12]
Length = 734
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 127/417 (30%), Positives = 206/417 (49%), Gaps = 41/417 (9%)
Query: 106 SRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLH--E 163
+S L + L++A LLADL +D E ++A ++ + V +S+ V +++G A L+ E
Sbjct: 56 GQSCLQQGLAMADLLADLDVDQETLAAAIIFESVHYADLSLDDVEEQLGPNIAKLVKGIE 115
Query: 164 SLRVKNNV-NLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQ 221
+ +NV + + + +RK L D +R +++ LA RL ++R +LP +
Sbjct: 116 RMSAMHNVQSFNKYPQNKQQIDNIRKMLLAMVDDVRVVLIKLAERLCILRVTAHLPEALR 175
Query: 222 LMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDI 281
+ I+ E M+I+APLA+ + + +E+EDL+FR+L P Y + L++ ++
Sbjct: 176 IQIATEAMEIYAPLANRLGIGAIKWEMEDLAFRHLHPEDYKAIAKGLKAKRLERDSFVNA 235
Query: 282 YKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKP 341
QL Q +K +E +V GR K +S KK+ + +E+ D +RV++
Sbjct: 236 IVAQLNQQIKQSG-----IEHFAVYGRSKHIHSIYKKMTRKNVALDEIYDATAVRVLV-- 288
Query: 342 SSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKT 401
E CY I+ +LWK++P DYI PKANGY+SLH AV+ G
Sbjct: 289 ---------TTEPQCYEVLGIVHTLWKQIPAEFDDYIFNPKANGYQSLHTAVE----GPE 335
Query: 402 RPLMEIQIRTEEMDMLAVNGTASHAFYK-GGLTNPEEAKR----LKAIMLAAAELAALRL 456
+ E+QIRT M LA G A+H YK GG+T E +R L+ ++ E+A+
Sbjct: 336 GRVFEVQIRTFHMHDLAEMGVAAHWKYKEGGVTRKESHERKIEWLRDVLAWHKEMAS--N 393
Query: 457 KDIPSTNHKGFEFDWRDRVFRLLDKNGD------GRISIEELMEVMEELGAPGEDAR 507
KD P F DRV+ + +GD G S++ V +LG AR
Sbjct: 394 KDAPEGMTSEF---LEDRVY-VFTPDGDVLDLPQGVTSLDFAYHVHSDLGHRCRGAR 446
>gi|410584315|ref|ZP_11321418.1| (p)ppGpp synthetase, RelA/SpoT family [Thermaerobacter subterraneus
DSM 13965]
gi|410504250|gb|EKP93761.1| (p)ppGpp synthetase, RelA/SpoT family [Thermaerobacter subterraneus
DSM 13965]
Length = 732
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 169/320 (52%), Gaps = 31/320 (9%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VAL+LADL++DA + A LL VE V+++QV G A LL + + N +
Sbjct: 57 LAVALILADLELDAATLVAALLHDTVEDTEVTLEQVEREFGSEVA-LLVDGVTKLNQIEW 115
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ ++ +E A LRK F DIR +++ LA RL MR L +PR +Q+ S E ++I
Sbjct: 116 RTRL--EEQAENLRKMFLAMARDIRVVLIKLADRLHNMRTLAVVPREKQIAKSRETLEIF 173
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSK-PLIDIYKEQLLQCL- 290
APLAH + + + +ELEDL+ RYL P Y E + P +E+L Q +
Sbjct: 174 APLAHRLGMSQIQWELEDLALRYLEPERY---------RELSERIPRKRAEREELAQVII 224
Query: 291 -KTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTS 349
A LA+ +QGR K YS +K+ + G+ ++ D++ +RVI+ +
Sbjct: 225 RTLRAKLAEAGIRADIQGRAKHFYSIYRKMYEQGKDLSQIYDLIAVRVIVDTVKD----- 279
Query: 350 EVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQI 409
CY ++ ++W+ +P R KDYIA PK+N Y+SLH V + G+ EIQI
Sbjct: 280 ------CYGALGVVHTIWRPLPGRFKDYIATPKSNMYQSLHTTV-IGPQGEP---FEIQI 329
Query: 410 RTEEMDMLAVNGTASHAFYK 429
RT +M A G A+H YK
Sbjct: 330 RTWDMHRTAEYGIAAHWRYK 349
>gi|164687521|ref|ZP_02211549.1| hypothetical protein CLOBAR_01162 [Clostridium bartlettii DSM
16795]
gi|164603295|gb|EDQ96760.1| RelA/SpoT family protein [Clostridium bartlettii DSM 16795]
Length = 736
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 112/327 (34%), Positives = 176/327 (53%), Gaps = 25/327 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
++VA +LADL++D EVI+AGLL VVE + + +++ G A L+ ++ +
Sbjct: 52 IAVANILADLELDMEVIAAGLLHDVVEDTPYTYEDIKELFGKDIADLVDGVTKLGK---I 108
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K Q ++ A LRK F DIR +++ LA RL MR L Y+P + + E ++I+
Sbjct: 109 KYQTKEESQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMPEEKAKYKAKETLEIY 168
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
+AH + + + +ELEDL+ +Y+ P Y + + + + ID ++++ L+
Sbjct: 169 GGIAHRIGISKIKWELEDLALKYIDPEGYRELAEKITMKRSQRQEYID----KIVRLLQD 224
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
D+ D V GR K YS KK+ K + EE+ D+ +R+I VNT
Sbjct: 225 KFKEVDI--DCEVSGRPKHFYSIYKKMKKKHKTFEEIYDLTAVRII-------VNTI--- 272
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY ++ ++W MP R KDYIA PK N Y+SLH V + +G+ +EIQIRT
Sbjct: 273 -KDCYAVLGMVHTMWIPMPGRFKDYIAMPKPNLYQSLHTTV-IGPDGEP---VEIQIRTH 327
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAK 439
EM +A NG A+H YK G+T +AK
Sbjct: 328 EMHEIAENGIAAHWKYKEGITGSHDAK 354
>gi|225017246|ref|ZP_03706438.1| hypothetical protein CLOSTMETH_01172 [Clostridium methylpentosum
DSM 5476]
gi|224950021|gb|EEG31230.1| hypothetical protein CLOSTMETH_01172 [Clostridium methylpentosum
DSM 5476]
Length = 734
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 167/326 (51%), Gaps = 25/326 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++VA +L++L MD++ I+A LL VVE + ++QV G A L+ ++
Sbjct: 59 VTHPIAVACILSELGMDSDCITAALLHDVVEDTTIPLKQVEKEFGADVALLVDGVTKLGK 118
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ L +++ A +RK L DIR +I+ LA RL MR L+++ +QL SLE
Sbjct: 119 ---IPLSTREEQQAENVRKMLLAMSKDIRVIIIKLADRLHNMRTLEFMKPEKQLEKSLET 175
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+++APLAH + + ELED++ +YL P +Y + L SK I+ K+++
Sbjct: 176 MEVYAPLAHRLGIRAVKEELEDIALQYLDPIAYEEITETLEKRALNSKNYIEYIKQKIF- 234
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
A L + ++GR KS Y +K+ GR +EV D+ +R+I+
Sbjct: 235 -----ARLQEYQISPKIEGRVKSHYGIYRKVYMAGRGFDEVYDIYAIRIIVDTVIE---- 285
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY ++ L+ +P+R KDYI+ PK N Y+SLH V GK EIQ
Sbjct: 286 -------CYNILGVMHDLFTPIPNRFKDYISMPKPNMYQSLHTTVI----GKEGVPFEIQ 334
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTN 434
IRT +M A G A+H YK G+
Sbjct: 335 IRTWDMHYTAEYGIAAHWKYKEGING 360
>gi|317122080|ref|YP_004102083.1| (p)ppGpp synthetase I SpoT/RelA [Thermaerobacter marianensis DSM
12885]
gi|315592060|gb|ADU51356.1| (p)ppGpp synthetase I, SpoT/RelA [Thermaerobacter marianensis DSM
12885]
Length = 731
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 121/366 (33%), Positives = 185/366 (50%), Gaps = 33/366 (9%)
Query: 69 NELTERMN-VLSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMDA 127
+EL ER L + L +A + S Q + R + L+VAL+LADL++DA
Sbjct: 12 DELLERAGRYLGPAELDWLRRAFEFSKAAHQGQKRA-SGRDFIEHPLAVALILADLELDA 70
Query: 128 EVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAALR 187
+ A LL VE V++++V G A LL + + N + + ++ +E A LR
Sbjct: 71 ATLVAALLHDTVEDTPVTLEEVEREFGPEVA-LLVDGVTKLNQIEWRTRL--EEQAENLR 127
Query: 188 K-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSF 246
K F DIR +++ LA RL MR L +PR +Q+ S E ++I APLAH + + + +
Sbjct: 128 KMFLAMARDIRVVLIKLADRLHNMRTLAVVPREKQIAKSRETLEIFAPLAHRLGMSQIQW 187
Query: 247 ELEDLSFRYLFPFSYLFVDTWLRSHETGSK-PLIDIYKEQLLQCL--KTDATLADLVEDV 303
ELEDL+ RYL P Y E + P +E+L Q + A LA+
Sbjct: 188 ELEDLALRYLEPERY---------RELAERIPRKRAEREELAQVIIATLKARLAEAGIRA 238
Query: 304 SVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREII 363
+QGR K YS +K+ + G+ ++ D++ +RVI+ + CY ++
Sbjct: 239 DIQGRAKHFYSIYRKMYEQGKDLSQIYDLIAVRVIVDTVKD-----------CYGALGVV 287
Query: 364 QSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTA 423
++W+ +P R KDYIA PK+N Y+SLH V + G+ EIQIRT +M A G A
Sbjct: 288 HTIWRPLPGRFKDYIATPKSNMYQSLHTTV-IGPQGEP---FEIQIRTWDMHRTAEYGIA 343
Query: 424 SHAFYK 429
+H YK
Sbjct: 344 AHWRYK 349
>gi|402310465|ref|ZP_10829429.1| putative GTP diphosphokinase [Eubacterium sp. AS15]
gi|400368388|gb|EJP21399.1| putative GTP diphosphokinase [Eubacterium sp. AS15]
Length = 739
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 109/330 (33%), Positives = 166/330 (50%), Gaps = 31/330 (9%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L++D I+AGL+ VVE V+ Q++ G A L+ ++ +
Sbjct: 48 VEVANILAELELDVASIAAGLMHDVVEDTEVTSDQMKSMFGEEIAKLVDGVTKLGK---I 104
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ ++ A LRK F DIR +++ LA RL MR L ++P Y+ ++ S E ++I
Sbjct: 105 AYKTKEENQAENLRKMFMAMGDDIRVVLIKLADRLHNMRTLKFMPPYKAVIKSKETLEIF 164
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYL----FVDTWLRSHETGSKPLIDIYKEQLLQ 288
AP+A + + +E+ED++ RY P Y + L E+ +ID KE L +
Sbjct: 165 APIAERLGMFKIKWEMEDIALRYTEPDFYFDMRRQIMRRLYQRESYITDMIDFLKENLAK 224
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ + + GR K+ YS KK+ + EE+ D L +RVI++ +
Sbjct: 225 EIPNN--------HFEIYGREKNLYSIYKKMKFKNKAFEEIYDFLAIRVIVQTKAE---- 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY I+ S+WK +P R KDYI PK N Y+SLH V G L+EIQ
Sbjct: 273 -------CYWVLGIVHSMWKPIPDRNKDYIGNPKVNNYQSLHTTV----FGPGGELVEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEA 438
IRTEEM A G A+H YK G +P E+
Sbjct: 322 IRTEEMHKTAEYGIAAHWKYKQGRIDPHES 351
>gi|312870607|ref|ZP_07730721.1| GTP diphosphokinase [Lactobacillus oris PB013-T2-3]
gi|311093882|gb|EFQ52212.1| GTP diphosphokinase [Lactobacillus oris PB013-T2-3]
Length = 745
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/343 (32%), Positives = 176/343 (51%), Gaps = 23/343 (6%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+LQMD E ++AG L +VE G ++ +++ G A + ++ +
Sbjct: 55 IQVAGILANLQMDPETVAAGYLHDIVEDTGATLDDIKELFGPTIAMIADGDTKLGK---I 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + ++ AA RK L DIR +I+ LA RL MR L +L +Q IS E ++I+
Sbjct: 112 QYKSNKEQMAATHRKLLLAMSKDIRVMIVKLADRLHNMRTLKHLRPDKQRRISNETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+A + + + +ELEDLS RYL P Y + + S I+ + ++ +K
Sbjct: 172 APIADRLGISTIKWELEDLSLRYLNPQQYYRIVHLMNSRRDQRVDSIN----RSIKLIKK 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ DL +V + GR K YS +K++ + ++ D+L +R+++ +
Sbjct: 228 AISDLDLGPNVEIYGRPKHIYSIYRKMVTQHKQFSQIYDLLAIRIVVDTIKD-------- 279
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKANGY+SLH + + G RPL E+QIRT
Sbjct: 280 ---CYAALGAIHTNWKPMPGRFKDYIAMPKANGYQSLHTTI-IGPEG--RPL-EVQIRTH 332
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALR 455
M +A G A+H YK G T+ + R + E+ +R
Sbjct: 333 HMHQVAEFGVAAHWAYKEGKTDGVQQTRDSQKLNVVKEILEMR 375
>gi|345017525|ref|YP_004819878.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344032868|gb|AEM78594.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 719
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 115/331 (34%), Positives = 174/331 (52%), Gaps = 37/331 (11%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL++D I+AGLL V+E V+ Q+ + G A L+ ++ +
Sbjct: 49 IEVAFILADLELDITTIAAGLLHDVIEDTDVTYDQLMENFGKEIADLVDGVTKL-GKIEY 107
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K +V ++ A +RK + DIR +++ LA RL MR L YLP +Q + E ++I+
Sbjct: 108 KSKV--EQQAENMRKMLIAMAKDIRVILIKLADRLHNMRTLKYLPLDKQKEKAEETLEIY 165
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSY--LFVDTWLRSHETGSKPLIDIYKEQLLQCL 290
AP+AH + + + +ELEDL RYL P Y L + E +E+ +Q +
Sbjct: 166 APIAHRLGISKIKWELEDLCLRYLHPEEYYDLVEKVAAKRKE----------REEFIQNI 215
Query: 291 KTDATLADLVEDVSVQ----GRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLV 346
T T+ + ++++ +Q GR K YS KK+ + E++ D+L +R+I V
Sbjct: 216 IT--TIKEKLKEMGIQAEVDGRPKHFYSIYKKMKTQNKTFEQIYDLLAVRII-------V 266
Query: 347 NTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLME 406
NT + CY I+ +LWK +P R KDYIA PK N Y+SLH V + G+ E
Sbjct: 267 NTV----KDCYGVLGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTV-IGPKGEP---FE 318
Query: 407 IQIRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
IQIRT EM A G A+H YK G T +E
Sbjct: 319 IQIRTWEMHKTAEYGIAAHWKYKEGKTTEDE 349
>gi|312898881|ref|ZP_07758269.1| GTP diphosphokinase [Megasphaera micronuciformis F0359]
gi|310620043|gb|EFQ03615.1| GTP diphosphokinase [Megasphaera micronuciformis F0359]
Length = 732
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 166/319 (52%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA +LAD+++D I+A LL VVE ++ + G A L+ ++ L
Sbjct: 56 LAVAEILADMEIDTTTITASLLHDVVEDTEYMLEDIERIFGKEVAFLVDGVTKLNR---L 112
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ +D+ ++RK F DIR +++ LA RL MR L Y+ +Q I+ E ++I+
Sbjct: 113 DYRTKEDQQVNSMRKMFLAMAKDIRVVVIKLADRLHNMRTLKYMRSEKQKRIAQETLEIY 172
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + +ELEDLSFRY+ P Y + ++ + +++ + + LK
Sbjct: 173 APLAHRLGIFNIKWELEDLSFRYMEPDKYYDLVDQMKEKRKVREEIVN----EAIDVLKK 228
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
TL + + GR K YS KK+ KD R ++ D+ +RVI+ +
Sbjct: 229 --TLTESSISFEINGRPKHFYSIYKKMKKDNRDLSQIYDLYAIRVIVDTVQD-------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I+ SLWK +P+R KDYIA PK N Y+SLH V + G+ +EIQIRT
Sbjct: 279 ---CYGVLGIVHSLWKPLPYRFKDYIAMPKPNNYQSLHTTV-IGTRGQP---VEIQIRTW 331
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A G A+H YK G
Sbjct: 332 DMHHIAEYGVAAHWRYKEG 350
>gi|334136491|ref|ZP_08509954.1| GTP diphosphokinase [Paenibacillus sp. HGF7]
gi|333605960|gb|EGL17311.1| GTP diphosphokinase [Paenibacillus sp. HGF7]
Length = 728
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 113/324 (34%), Positives = 169/324 (52%), Gaps = 25/324 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA +L D+QMD I A LL VVE VS++ V+D+ G A L+ +++ +
Sbjct: 49 LAVADILVDMQMDVTSIIAALLHDVVEDTTVSLEAVQDKFGRTCAMLVDGLTKLER---I 105
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ RK F DIR +++ LA RL MR L Y Q I+ E ++I
Sbjct: 106 KFKTKEEQQNENYRKMFVAMAQDIRVILIKLADRLHNMRTLKYQSEESQRRIADETLEIF 165
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
P+AH + + + +E+ED++ RYL P Y + ++ T + Y E +++ ++
Sbjct: 166 CPIAHRLGISAIKWEMEDIALRYLNPQQYYRIVNLMQKKRTEREK----YIEDVIRNIQD 221
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ D+S GR K YS KK+ + E+ D++ LRVI+ N+
Sbjct: 222 KLREMGIEGDIS--GRPKHIYSIHKKMSSRNKQFNEIYDLMALRVIV---DNI------- 269
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY II +LWK MP R KDYIA PK N Y+SLH V + G+ PL E+QIRT
Sbjct: 270 -KDCYAALGIIHTLWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGE--PL-EVQIRTW 324
Query: 413 EMDMLAVNGTASHAFYKGGLTNPE 436
EM A G A+H YK G +PE
Sbjct: 325 EMHKTAEYGIAAHWAYKEGNGSPE 348
>gi|295695639|ref|YP_003588877.1| (p)ppGpp synthetase I SpoT/RelA [Kyrpidia tusciae DSM 2912]
gi|295411241|gb|ADG05733.1| (p)ppGpp synthetase I, SpoT/RelA [Kyrpidia tusciae DSM 2912]
Length = 739
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 110/328 (33%), Positives = 175/328 (53%), Gaps = 36/328 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
++V +LADL +D ++A LL VVE V+++++ R G L+ +++ +
Sbjct: 71 IAVTEILADLHLDGTTLTAALLHDVVEDTPVTLEEIGKRFGPEVVALVDGVTKLRR---I 127
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ +++ A LRK L DIR +++ LA RL MR L ++P +Q+ I+ E ++I
Sbjct: 128 QYATREEQQAENLRKMLLAMAKDIRVILIKLADRLHNMRTLRHVPEQKQMRIAKETLEIF 187
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWL----RSHETGSKPLIDIYKEQLLQ 288
APLAH + + + +ELEDL+ RYL P Y + + R E + +ID +E+ ++
Sbjct: 188 APLAHRLGISRIQWELEDLALRYLNPQQYYRIANLMTKKRREREAYIQKVIDTLREKFVE 247
Query: 289 C-LKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVN 347
+K D + GR K YS +K++ + E+ D+L +RVI+ N+
Sbjct: 248 LNIKAD-----------ISGRPKHIYSVYRKMVNQNKQFGEIYDLLAVRVIV---DNI-- 291
Query: 348 TSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEI 407
+ CY ++ +LW+ +P R KDYIA PK N Y+SLH V + G+ PL EI
Sbjct: 292 ------KDCYAILGVVHTLWRPLPGRFKDYIAMPKPNMYQSLHTTV-IGPQGE--PL-EI 341
Query: 408 QIRTEEMDMLAVNGTASHAFYK-GGLTN 434
QIRT EM A G A+H YK GG T+
Sbjct: 342 QIRTWEMHRTAEYGIAAHWLYKQGGRTS 369
>gi|410464128|ref|ZP_11317593.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfovibrio magneticus
str. Maddingley MBC34]
gi|409982755|gb|EKO39179.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfovibrio magneticus
str. Maddingley MBC34]
Length = 740
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 112/337 (33%), Positives = 175/337 (51%), Gaps = 28/337 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L+ L A +LAD+++DA I++GLL VE ++ ++ + G A ++ ++
Sbjct: 46 LSHPLEAAGILADMRLDAASIASGLLHDTVEDTKATVDELEELFGEEVADIVDGVTKISL 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + ++ A +RK L DIR +++ LA RL MR L++ ++Q +I+ E
Sbjct: 106 ---IPFETKEEAQAENIRKMILAMAEDIRVVLVKLADRLHNMRTLEFQKPHKQAIIAQET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M I+APLA+ + + + ELED SFRYL P Y + + +H T + I+ L
Sbjct: 163 MDIYAPLANRLGLHRIKTELEDWSFRYLKPDIYAQLVEGVATHHTVDETFIERVIGHLND 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L + A +V GR K +S K+ G ++V+D++ RVI++
Sbjct: 223 LLGPNNIKARIV------GRRKHLWSVHNKMRVQGLTIDQVHDLVAFRVIVETI------ 270
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY ++ SLWK +P R KDYI+ PKAN Y+SLH V V G+ +EIQ
Sbjct: 271 -----RECYHVLGLVHSLWKPVPGRFKDYISMPKANMYQSLHTTV-VGPGGER---IEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK---GGLTNPEEAKRLK 442
IRTEEM LA G A+H YK G NP++ +R +
Sbjct: 322 IRTEEMHRLAEEGVAAHWKYKEREKGKFNPKDVERFQ 358
>gi|291531042|emb|CBK96627.1| (p)ppGpp synthetase, RelA/SpoT family [Eubacterium siraeum 70/3]
Length = 725
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 109/338 (32%), Positives = 171/338 (50%), Gaps = 27/338 (7%)
Query: 110 LTKALSVALLLAD-LQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVK 168
+T ++VA +L + MD + I A LL VVE V + ++ + G AHL+ ++
Sbjct: 47 ITHPVAVAYILVEQFCMDTDTICAALLHDVVEDTDVGLDVIQKKFGEDVAHLVDGVTKIG 106
Query: 169 NNVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLE 227
+ L +++ A +RK + DIR +I+ LA RL MR L P +QL SLE
Sbjct: 107 Q---VPLNTREEQQAENIRKILIAMSKDIRVIIIKLADRLHNMRTLASRPPEKQLKTSLE 163
Query: 228 VMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLL 287
M +AP+AH + + + E+EDL+ RYL P+ + +++ L H+ ID K +
Sbjct: 164 TMNFYAPIAHRLGISDVKEEMEDLALRYLDPYGFKEIESLLDVHKDERDTFIDKIKGMIR 223
Query: 288 QCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVN 347
+ ++D+ ++GR KS YS KK+ G+ E+ D+ +R+I++
Sbjct: 224 E------RISDIQPPPIIEGRVKSIYSIYKKVYVKGKDFSEIYDIYAVRIILQTVVE--- 274
Query: 348 TSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEI 407
CY II +++ +P+R KDYIA PK N Y+SLH V G+ E+
Sbjct: 275 --------CYNVLGIIHDMFRPIPYRFKDYIAMPKPNRYQSLHTTV----IGREGIPFEV 322
Query: 408 QIRTEEMDMLAVNGTASHAFYKGGLT-NPEEAKRLKAI 444
QIRT+EM A G A+H YK G++ N KR I
Sbjct: 323 QIRTQEMHNTAQYGVAAHWKYKAGISGNVAGEKRFDWI 360
>gi|328955206|ref|YP_004372539.1| (p)ppGpp synthetase I SpoT/RelA [Coriobacterium glomerans PW2]
gi|328455530|gb|AEB06724.1| (p)ppGpp synthetase I, SpoT/RelA [Coriobacterium glomerans PW2]
Length = 784
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 119/332 (35%), Positives = 173/332 (52%), Gaps = 28/332 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA++LA+L+MD +V+ A LL VE S+ +V G + L+ V N+
Sbjct: 83 VEVAIILAELKMDCDVLCAALLHDTVEDTQTSLDEVASLFGSTVSELVDG---VTKLTNI 139
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
++ +D++ A LRK F DIR +I+ LA RL MR L L ++L + E M ++
Sbjct: 140 EVGSMDEKQALNLRKMFLAMSRDIRVIIVKLADRLHNMRTLAALSEDRRLFKARETMDVY 199
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + + +ELEDLSF YL P +Y + + S+ + + + + ++ L T
Sbjct: 200 APLADRLGMSSIKWELEDLSFFYLDPEAYQRISRMVAE----SREVRERFLSETIKTL-T 254
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
D + D + GR K +S +K+ + G+ E+ D++ LRV I PS N
Sbjct: 255 DELKKMGMGDYQISGRSKHYWSIHQKMRRKGKEFSEIYDLVALRV-IAPSMN-------- 305
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY T I SLW MP R KDY+A PK N YRSLH V G T +EIQIRT
Sbjct: 306 --DCYLTLGAIHSLWHPMPGRFKDYVATPKLNNYRSLHTTV----IGPTARPLEIQIRTA 359
Query: 413 EMDMLAVNGTASHAFYK--GGLTN--PEEAKR 440
EM A G A+H YK GG + +EA+R
Sbjct: 360 EMHEQAEYGIAAHWLYKKSGGCASLKSKEAQR 391
>gi|268611136|ref|ZP_06144863.1| (p)ppGpp synthetase I, SpoT/RelA [Ruminococcus flavefaciens FD-1]
Length = 766
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 105/320 (32%), Positives = 168/320 (52%), Gaps = 23/320 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA +L +L MD + I A LL VVE ++ ++ R G A L+ ++ +
Sbjct: 90 LAVAYILLELGMDTDTICAALLHDVVEDTDATLDDLKKRFGQDVALLVDGVTKLSK---I 146
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+++ A +RK L DIR +I+ LA RL MR L Y P +Q ++LE M I+
Sbjct: 147 PTSTKEEQAAENIRKILLAMSQDIRVMIIKLADRLHNMRTLRYRPLDKQRNVALETMNIY 206
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+AH + + EL+DL+F YL P++Y ++ L + + + I+I K+++ + KT
Sbjct: 207 APIAHRLGIRAMKEELQDLAFHYLDPYAYSEIENILENKKEEREAFIEIIKKRISERFKT 266
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ D + + GR KS YS +K+ + +++ D +R+I+ + +
Sbjct: 267 E----DFAQPPQIDGRVKSIYSIYRKIFIGHKNIDQIYDKYAVRIIV---------TTIA 313
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
E CY +I ++K MP+R KDYIA K+N Y+SLH V GK E+QIRT
Sbjct: 314 E--CYNVLGLIHDMFKPMPNRFKDYIANAKSNMYQSLHTTV----LGKEGIPFEVQIRTW 367
Query: 413 EMDMLAVNGTASHAFYKGGL 432
+M A G A+H YK G+
Sbjct: 368 DMHETAEYGIAAHWKYKEGI 387
>gi|403237624|ref|ZP_10916210.1| GTP pyrophosphokinase [Bacillus sp. 10403023]
Length = 729
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 110/323 (34%), Positives = 168/323 (52%), Gaps = 33/323 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL+MD I+ G L VVE V++Q++ D A L+ ++ +
Sbjct: 55 VQVAGILVDLEMDPSTIAGGFLHDVVEDTNVTLQEISDAFSSEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP +Q IS E ++I
Sbjct: 112 KYKSKEEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPPEKQRRISNETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ + Y E++++ +K
Sbjct: 172 APLAHRLGISRIKWELEDTALRYLNPQQYYRIVNLMKKKRAEREE----YLEEVIKEVK- 226
Query: 293 DATLADLVEDVSVQ----GRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
D V++VS++ GR K YS +K++ + E+ D+L +R+++ +
Sbjct: 227 -----DRVDEVSIKADISGRPKHIYSIYRKMVLQNKQFNEIYDLLAVRIVVNSIKD---- 277
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY II + WK MP R KDYIA PK N Y+SLH V + G PL E+Q
Sbjct: 278 -------CYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGD--PL-EVQ 326
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IRT EM +A G A+H YK G
Sbjct: 327 IRTVEMHQIAEYGIAAHWAYKEG 349
>gi|167037441|ref|YP_001665019.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320115854|ref|YP_004186013.1| RelA/SpoT family protein [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|166856275|gb|ABY94683.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319928945|gb|ADV79630.1| RelA/SpoT family protein [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 719
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 115/331 (34%), Positives = 174/331 (52%), Gaps = 37/331 (11%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL++D I+AGLL V+E V+ Q+ + G A L+ ++ +
Sbjct: 49 IEVAFILADLELDITTIAAGLLHDVIEDTDVTYDQLMENFGKEIADLVDGVTKL-GKIEY 107
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K +V ++ A +RK + DIR +++ LA RL MR L YLP +Q + E ++I+
Sbjct: 108 KSKV--EQQAENMRKMLIAMAKDIRVILIKLADRLHNMRTLKYLPLDKQKEKAEETLEIY 165
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSY--LFVDTWLRSHETGSKPLIDIYKEQLLQCL 290
AP+AH + + + +ELEDL RYL P Y L + E +E+ +Q +
Sbjct: 166 APIAHRLGISKIKWELEDLCLRYLHPEEYYDLVEKVAAKRKE----------REEFIQNI 215
Query: 291 KTDATLADLVEDVSVQ----GRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLV 346
T T+ + ++++ +Q GR K YS KK+ + E++ D+L +R+I V
Sbjct: 216 IT--TIKEKLKEMGIQAEVDGRPKHFYSIYKKMKTQNKTFEQIYDLLAVRII-------V 266
Query: 347 NTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLME 406
NT + CY I+ +LWK +P R KDYIA PK N Y+SLH V + G+ E
Sbjct: 267 NTV----KDCYGVLGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTV-IGPKGEP---FE 318
Query: 407 IQIRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
IQIRT EM A G A+H YK G T +E
Sbjct: 319 IQIRTWEMHKTAEYGIAAHWKYKEGKTTEDE 349
>gi|404328487|ref|ZP_10968935.1| (p)ppGpp synthetase I SpoT/RelA [Sporolactobacillus vineae DSM
21990 = SL153]
Length = 724
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 168/325 (51%), Gaps = 25/325 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T + VA +L +L+MD I +G L VVE V++ VR+ G A L+ ++++
Sbjct: 45 ITHPVEVAGILVNLKMDVTTIMSGFLHDVVEDTPVTLDDVRNEFGDNVAMLVDGVTKLRH 104
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ +D+ A RK F D+R +I+ LA RL MR L Y+ + +Q+ + E
Sbjct: 105 ---FEYSSKEDQQAENHRKMFVAMARDLRCVIVKLADRLHNMRTLKYMTKEKQIQKANET 161
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I APLA+ + + + +ELED+S RYL P Y + ++ + I E L +
Sbjct: 162 MEIFAPLANRLGISAIKWELEDISLRYLNPQQYYKIVNLMKQKREEREAYIAQVVEDLKK 221
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+K+ A+ + GR K YS +K++ + E+ D+ +R+I++ +
Sbjct: 222 YVKSVHIKAE------ISGRPKHIYSIYRKMVNQHKQFNEIYDLFAVRIIVESIKD---- 271
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+Q
Sbjct: 272 -------CYAILGIIHTHWKPMPGRFKDYIAMPKANMYQSLHTTV-IGPKGD--PL-EVQ 320
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLT 433
+RTEEM +A G A+H YK G T
Sbjct: 321 VRTEEMHDVAEYGIAAHWAYKEGKT 345
>gi|427412621|ref|ZP_18902813.1| RelA/SpoT family protein [Veillonella ratti ACS-216-V-Col6b]
gi|425716428|gb|EKU79412.1| RelA/SpoT family protein [Veillonella ratti ACS-216-V-Col6b]
Length = 744
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 166/319 (52%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA +LA+LQ+DA + A LL VVE ++ Q+ + G A L+ ++
Sbjct: 68 LAVATILANLQIDATTVIAALLHDVVEDTEYTLPQIEELFGKEVAFLVDGVTKLNQ---F 124
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ +D+ RK L D+R +++ L RL MR L ++ +Q I+ E ++I
Sbjct: 125 QYHTKEDQQLENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKHMRSDKQKRIAQETLEIF 184
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + +ELEDLSFRYL P Y + ++ + +++ EQL + L+
Sbjct: 185 APLAHRLGIFNIKWELEDLSFRYLEPDKYYDLVEQMQEKRHVREEIVNDTMEQLKKALED 244
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
AD V+GR K YS KK+ KD R ++ D+ +RVI+ +
Sbjct: 245 AHIKAD------VKGRPKHFYSIYKKMKKDNRDLSQIYDLYAVRVIVDTIPD-------- 290
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I+ +LWK +P+R KDYIA PK+N Y+SLH + + G + +EIQIRT
Sbjct: 291 ---CYAVLGIVHNLWKPLPYRFKDYIAMPKSNMYQSLHTTI-IGTMGHS---VEIQIRTW 343
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM ++ G A+H YK G
Sbjct: 344 EMHRVSEYGVAAHWRYKEG 362
>gi|70726288|ref|YP_253202.1| GTP pyrophosphokinase [Staphylococcus haemolyticus JCSC1435]
gi|68447012|dbj|BAE04596.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (PPGPP
synthetase I) ((P)PPGPP synthetase) [Staphylococcus
haemolyticus JCSC1435]
Length = 729
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 111/340 (32%), Positives = 178/340 (52%), Gaps = 25/340 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + V+D A ++ ++K +
Sbjct: 55 IQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFDDVKDMFNEEIARIVDGVTKLKK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L + R +Q+ IS E ++I+
Sbjct: 112 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMAREKQVRISKETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + Y + ++T
Sbjct: 172 APLAHRLGINTIKWELEDTALRYIDSVQYFRIVNLMKKKRSEREA----YIANAIDKIQT 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ D+ ++S GR K YS +K++K + +++ D+L +RVI+ N +N
Sbjct: 228 EMIKMDITGEIS--GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV----NSIND---- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 278 ---CYAILGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTV-VGPNGD--PL-EIQIRTY 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELA 452
EM +A +G A+H YK G T E+ + + + ELA
Sbjct: 331 EMHEIAEHGVAAHWAYKEGKTVNEKNQDFQNKLNWLKELA 370
>gi|348027280|ref|YP_004767085.1| GTP diphosphokinase [Megasphaera elsdenii DSM 20460]
gi|341823334|emb|CCC74258.1| GTP diphosphokinase [Megasphaera elsdenii DSM 20460]
Length = 734
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 113/327 (34%), Positives = 165/327 (50%), Gaps = 41/327 (12%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA +LAD+++D I+A LL VVE ++ ++ G A L+ ++ L
Sbjct: 56 LAVAQILADMKIDTTTITASLLHDVVEDTSYTLDDLKKMFGKEVAFLVDGVTKLSR---L 112
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ +D+ ++RK F D+R +++ LA RL MR L Y+ +Q I+ E ++I
Sbjct: 113 NYRTKEDQQLNSMRKMFLAMAKDVRVVVIKLADRLHNMRTLRYMRSDKQKRIAQETLEIF 172
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYL-FVDTWLRSHETGSKPL---IDIYKEQL-- 286
APLAH + + +ELEDLSFRYL P Y VD + + + ID+ K+ L
Sbjct: 173 APLAHRLGIFNIKWELEDLSFRYLEPDKYYDLVDQMKQKRHVREEIVNEAIDVLKKALDE 232
Query: 287 --LQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSN 344
+ C + GR K YS KK+ KD R +V D+ +RVI+ +
Sbjct: 233 AHIHC--------------EINGRPKHFYSIYKKMKKDNRDLSQVYDLFAIRVIVDDVKD 278
Query: 345 LVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPL 404
CY I+ SLWK +P+R KDYIA PK N Y+SLH V + G+
Sbjct: 279 -----------CYGVLGIVHSLWKPLPYRFKDYIAMPKPNNYQSLHTTV-IGTRGQP--- 323
Query: 405 MEIQIRTEEMDMLAVNGTASHAFYKGG 431
+EIQIRT EM +A G A+H YK G
Sbjct: 324 VEIQIRTWEMHRIAEYGVAAHWRYKEG 350
>gi|326390128|ref|ZP_08211689.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter ethanolicus JW
200]
gi|325993776|gb|EGD52207.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter ethanolicus JW
200]
Length = 719
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 115/331 (34%), Positives = 174/331 (52%), Gaps = 37/331 (11%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL++D I+AGLL V+E V+ Q+ + G A L+ ++ +
Sbjct: 49 IEVAYILADLELDITTIAAGLLHDVIEDTDVTYDQLMENFGKEIADLVDGVTKL-GKIEY 107
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K +V ++ A +RK + DIR +++ LA RL MR L YLP +Q + E ++I+
Sbjct: 108 KSKV--EQQAENMRKMLIAMAKDIRVILIKLADRLHNMRTLKYLPLDKQKEKAEETLEIY 165
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSY--LFVDTWLRSHETGSKPLIDIYKEQLLQCL 290
AP+AH + + + +ELEDL RYL P Y L + E +E+ +Q +
Sbjct: 166 APIAHRLGISKIKWELEDLCLRYLHPEEYYDLVEKVAAKRKE----------REEFIQNI 215
Query: 291 KTDATLADLVEDVSVQ----GRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLV 346
T T+ + ++++ +Q GR K YS KK+ + E++ D+L +R+I V
Sbjct: 216 IT--TIKEKLKEMGIQAEVDGRPKHFYSIYKKMKTQNKTFEQIYDLLAVRII-------V 266
Query: 347 NTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLME 406
NT + CY I+ +LWK +P R KDYIA PK N Y+SLH V + G+ E
Sbjct: 267 NTV----KDCYGVLGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTV-IGPKGEP---FE 318
Query: 407 IQIRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
IQIRT EM A G A+H YK G T +E
Sbjct: 319 IQIRTWEMHKTAEYGIAAHWKYKEGKTTEDE 349
>gi|159482803|ref|XP_001699457.1| hypothetical protein CHLREDRAFT_177832 [Chlamydomonas reinhardtii]
gi|158272908|gb|EDO98703.1| predicted protein [Chlamydomonas reinhardtii]
Length = 435
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 172/329 (52%), Gaps = 55/329 (16%)
Query: 130 ISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRKF 189
+ AG++ + + G + +R ++G A L+H+ LRV+ ++++LDDE A+A+R++
Sbjct: 1 MCAGVVAEAADVGALRADVIRAQLGPSVAALVHDMLRVRQAPR-RIELLDDEGASAVREW 59
Query: 190 CLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELE 249
CL ++D+RA +++A ++I AP+ HA+ LS +E
Sbjct: 60 CLAFHDVRACAVEVA------------------------LQIAAPMGHALGLGPLSALME 95
Query: 250 DLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLAD-------LVED 302
D+ + LFP SY +WLR L+D ++ L + D L
Sbjct: 96 DMCLKVLFPDSYASTASWLRG-------LMDPAEDALFAAQQQLLAALDRHPAFDRLAGG 148
Query: 303 VSVQGRYKSRYSTMKKLL------KDGRIPEEVNDVLGLRVIIKPSSNL--VNTSEVGER 354
+ V+ R KS +S MKKLL + GR EE+ D+LG+R I++P L +
Sbjct: 149 LVVKARTKSLFSVMKKLLHLGDLSRGGRSREELYDLLGMRAIVQPVDFLPPAEAEAAAAK 208
Query: 355 ACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEM 414
ACY +++ +LW+ +P R+KDYI PK NGY+S+H+ + + + +QIRT M
Sbjct: 209 ACYIVQDVASTLWRPIPSRSKDYITAPKTNGYQSIHLTLQLG-------QLGLQIRTAAM 261
Query: 415 DMLAVNGTASHAFYKGGLTNPEEAKRLKA 443
D A +G A+HA YKGGL + A++L+A
Sbjct: 262 DRAAESGDAAHAVYKGGL-DARTARQLQA 289
>gi|291612869|ref|YP_003523026.1| (p)ppGpp synthetase I, SpoT/RelA [Sideroxydans lithotrophicus ES-1]
gi|291582981|gb|ADE10639.1| (p)ppGpp synthetase I, SpoT/RelA [Sideroxydans lithotrophicus ES-1]
Length = 709
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 107/323 (33%), Positives = 166/323 (51%), Gaps = 29/323 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++VA +L L +DA+ I+A LL V E +SI+Q+ ++ G A L+ ++
Sbjct: 48 ITHPIAVARILTPLHLDAQAITAALLHDVAEDTSISIEQIGEQFGKPVAELVDGLSKLDK 107
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
LK + +D A RK + D+R +++ LA RL MR LD + + + I+ E
Sbjct: 108 ---LKFETKEDAQAENFRKMLMAMARDVRVILIKLADRLHNMRTLDSVSKEKSERIARET 164
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M I+AP+A+ + N L ELEDLSF+YL+P Y + L+ + ++ E + Q
Sbjct: 165 MDIYAPIANRLGLNTLYQELEDLSFKYLYPNRYAVLSKALKVARGNRREVVSKILEAIRQ 224
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIK--PSSNLV 346
L + A+ ++GR K Y +K+ +V D+ G RV++ PS
Sbjct: 225 RLDENHIKAE------IRGREKHLYGIYQKMQSKSLAFAQVLDIYGFRVLVDDVPS---- 274
Query: 347 NTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLME 406
CY ++ +L+K P + KDYIA PKANGY+SLH + G +E
Sbjct: 275 ---------CYVALGVLHALYKPFPGKFKDYIAIPKANGYQSLHSTL----FGPFGTPIE 321
Query: 407 IQIRTEEMDMLAVNGTASHAFYK 429
+QIRT EM+ LA +G ASH YK
Sbjct: 322 VQIRTHEMNKLAESGVASHWLYK 344
>gi|430750699|ref|YP_007213607.1| RelA/SpoT family (p)ppGpp synthetase [Thermobacillus composti KWC4]
gi|430734664|gb|AGA58609.1| (p)ppGpp synthetase, RelA/SpoT family [Thermobacillus composti
KWC4]
Length = 730
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 108/323 (33%), Positives = 168/323 (52%), Gaps = 25/323 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
++VA +L ++QMD A LL VVE V++ +R+R G A L+ +++ +
Sbjct: 49 VAVAEILVNMQMDVTSAVAALLHDVVEDTNVTLDDLRERFGETLAMLVDGLTKLER---I 105
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ RK F DIR +++ LA RL MR L + Q I+ E ++I+
Sbjct: 106 QFRSKEEQQNENYRKMFVAMAQDIRVILIKLADRLHNMRTLKFQSEEAQRRIAHETLEIY 165
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
P+AH + + + +E+ED++ RYL P Y + ++ + I E++ + L
Sbjct: 166 CPIAHRLGMSAIKWEMEDIALRYLNPQQYYRIANLMQKKRAEREQYIADVIERIREKLAE 225
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
D + GR K YS KK+ + + E+ D+L +R+I+ NL
Sbjct: 226 MGIQGD------ISGRPKHIYSIYKKMTEKNKQFNEIYDLLAIRIIV---DNL------- 269
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY T II +LW+ MP R KDYIA PKAN Y+SLH V + NG+ PL E+QIRT
Sbjct: 270 -KDCYATLGIIHTLWRPMPGRFKDYIAMPKANMYQSLHTTV-IGPNGE--PL-EVQIRTW 324
Query: 413 EMDMLAVNGTASHAFYKGGLTNP 435
EM + G A+H YK G TNP
Sbjct: 325 EMHRTSEYGIAAHWAYKEGQTNP 347
>gi|23099479|ref|NP_692945.1| GTP pyrophosphokinase [Oceanobacillus iheyensis HTE831]
gi|22777708|dbj|BAC13980.1| GTP pyrophosphokinase (stringent response) [Oceanobacillus
iheyensis HTE831]
Length = 734
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 114/326 (34%), Positives = 173/326 (53%), Gaps = 25/326 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADLQMD+E ISAG L VVE V+++Q+ + A L+ ++ +
Sbjct: 55 VQVAGILADLQMDSETISAGFLHDVVEDTDVTVEQLEEAFNHEIAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + + + A RK F DIR +++ LA RL MR L +L +Q IS E ++I
Sbjct: 112 RYETKEAQQAENHRKMFVAMAKDIRVIMIKLADRLHNMRTLKHLAPEKQRRISNETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ + I ++L L T
Sbjct: 172 APLAHRLGISTIKWELEDTALRYLNPQQYYRIVQLMKQKREERESYIQEVIDELALELDT 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
A++ GR K YS +K++K + E+ D+L +R++++ N+
Sbjct: 232 VNIEAEM------SGRPKHLYSIYQKMVKQKKQFNEIYDLLAVRILVE---NI------- 275
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY II + WK MP R KDYIA PK N Y+SLH V + G PL E+QIRT+
Sbjct: 276 -KDCYAVLGIIHTNWKPMPGRFKDYIAMPKQNLYQSLHTTV-IGPKGD--PL-EVQIRTK 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEA 438
EM +A G A+H YK G T+ E++
Sbjct: 331 EMHDIAEYGIAAHWAYKEGKTSREKS 356
>gi|329116715|ref|ZP_08245432.1| GTP diphosphokinase [Streptococcus parauberis NCFD 2020]
gi|326907120|gb|EGE54034.1| GTP diphosphokinase [Streptococcus parauberis NCFD 2020]
Length = 739
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 182/364 (50%), Gaps = 28/364 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADLQ+DA ++ G L VVE ++++ + D G ++ ++ +
Sbjct: 55 IQVAGILADLQLDAVTVACGFLHDVVEDTEITLEDIEDEFGKDVRDIVDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ L+ RL MR L +L + +Q IS E M+I+
Sbjct: 112 EYKSHEEQLAENHRKMLMAMSRDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELEDLSFRYL + + + + L+D E+++
Sbjct: 172 APLAHRLGISRIKWELEDLSFRYLNEIEFYKITHLMSEKRREREALVDNIVEKIISYTNE 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ V GR K YS +K+ + +++ D++ +R I++ S++
Sbjct: 232 QGLYGE------VYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCIMETQSDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQIRT+
Sbjct: 279 ----YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQIRTK 329
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFEFDWR 472
EM +A G A+H YK GL K M EL + L+D + + K F +
Sbjct: 330 EMHQVAEYGVAAHWAYKKGLKGKVSQSDQKVGMNWINEL--VELQDASNGDAKDFVDSVK 387
Query: 473 DRVF 476
+ +F
Sbjct: 388 EEIF 391
>gi|392960862|ref|ZP_10326327.1| RelA/SpoT family protein [Pelosinus fermentans DSM 17108]
gi|421054380|ref|ZP_15517348.1| RelA/SpoT family protein [Pelosinus fermentans B4]
gi|421059720|ref|ZP_15522283.1| RelA/SpoT family protein [Pelosinus fermentans B3]
gi|421068769|ref|ZP_15530010.1| RelA/SpoT family protein [Pelosinus fermentans A12]
gi|421071241|ref|ZP_15532361.1| (p)ppGpp synthetase I, SpoT/RelA [Pelosinus fermentans A11]
gi|392439135|gb|EIW16869.1| RelA/SpoT family protein [Pelosinus fermentans A12]
gi|392440738|gb|EIW18398.1| RelA/SpoT family protein [Pelosinus fermentans B4]
gi|392447157|gb|EIW24411.1| (p)ppGpp synthetase I, SpoT/RelA [Pelosinus fermentans A11]
gi|392454759|gb|EIW31581.1| RelA/SpoT family protein [Pelosinus fermentans DSM 17108]
gi|392458415|gb|EIW34950.1| RelA/SpoT family protein [Pelosinus fermentans B3]
Length = 736
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/344 (34%), Positives = 182/344 (52%), Gaps = 34/344 (9%)
Query: 98 QSLPLSPDSRSPLTKA---------LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQ 148
Q+ L+ D+ T+A L VA +L++LQ+DA ISA LL VVE S+++
Sbjct: 30 QAYELAVDAHKGQTRASGEEYICHPLGVAKILSELQIDALTISASLLHDVVEDTAFSLEE 89
Query: 149 VRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRL 207
+ G A L+ ++ ++ + +++ RK F DIR +++ LA RL
Sbjct: 90 LEKLFGKEVAMLVDGVTKLSR---IEYKSKEEQQLENFRKMFLAMAKDIRVVLIKLADRL 146
Query: 208 DMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTW 267
MR L ++P ++Q IS E +I APLAH + + + +ELEDL+FRYL P Y +
Sbjct: 147 HNMRTLKHMPEHKQRRISQETHEIFAPLAHRLGISSVKWELEDLAFRYLEPEKYYELVEK 206
Query: 268 LRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPE 327
++ + LI+ + ++ L A L D+ +QGR K YS KK+LK +
Sbjct: 207 VKQKRREREQLIN----EAIKIL--SARLDDVEIKADIQGRPKHFYSIYKKMLKGNKDLS 260
Query: 328 EVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYR 387
E+ D+ +R+ LV+T + CY ++ +LWK +P R KDYIA PK+N Y+
Sbjct: 261 EIYDLSAVRI-------LVDTV----KDCYGALGVVHTLWKPLPLRFKDYIAMPKSNMYQ 309
Query: 388 SLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGG 431
SLH V +S G+ PL EIQIRT +M + G A+H YK G
Sbjct: 310 SLHTTV-ISTEGQ--PL-EIQIRTMDMHRTSEYGIAAHWRYKEG 349
>gi|333905747|ref|YP_004479618.1| GTP pyrophosphokinase [Streptococcus parauberis KCTC 11537]
gi|333121012|gb|AEF25946.1| GTP pyrophosphokinase [Streptococcus parauberis KCTC 11537]
Length = 739
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 182/364 (50%), Gaps = 28/364 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADLQ+DA ++ G L VVE ++++ + D G ++ ++ +
Sbjct: 55 IQVAGILADLQLDAVTVACGFLHDVVEDTEITLEDIEDEFGKDVRDIVDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ L+ RL MR L +L + +Q IS E M+I+
Sbjct: 112 EYKSHEEQLAENHRKMLMAMSRDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELEDLSFRYL + + + + L+D E+++
Sbjct: 172 APLAHRLGISRIKWELEDLSFRYLNEIEFYKITHLMSEKRREREALVDNIVEKIISYTNE 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ V GR K YS +K+ + +++ D++ +R I++ S++
Sbjct: 232 QGLYGE------VYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCIMETQSDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQIRT+
Sbjct: 279 ----YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQIRTK 329
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFEFDWR 472
EM +A G A+H YK GL K M EL + L+D + + K F +
Sbjct: 330 EMHQVAEYGVAAHWAYKKGLKGKVSQSDQKVGMNWINEL--VELQDASNGDAKDFVDSVK 387
Query: 473 DRVF 476
+ +F
Sbjct: 388 EEIF 391
>gi|456370069|gb|EMF48967.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Streptococcus
parauberis KRS-02109]
gi|457094333|gb|EMG24862.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Streptococcus
parauberis KRS-02083]
Length = 739
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 182/364 (50%), Gaps = 28/364 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADLQ+DA ++ G L VVE ++++ + D G ++ ++ +
Sbjct: 55 IQVAGILADLQLDAVTVACGFLHDVVEDTEITLEDIEDEFGKDVRDIVDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ L+ RL MR L +L + +Q IS E M+I+
Sbjct: 112 EYKSHEEQLAENHRKMLMAMSRDIRVILVKLSDRLHNMRTLKHLRKDKQERISRETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELEDLSFRYL + + + + L+D E+++
Sbjct: 172 APLAHRLGISRIKWELEDLSFRYLNEIEFYKITHLMSEKRREREALVDNIVEKIISYTNE 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ V GR K YS +K+ + +++ D++ +R I++ S++
Sbjct: 232 QGLYGE------VYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCIMETQSDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQIRT+
Sbjct: 279 ----YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQIRTK 329
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFEFDWR 472
EM +A G A+H YK GL K M EL + L+D + + K F +
Sbjct: 330 EMHQVAEYGVAAHWAYKKGLKGKVSQSDQKVGMNWINEL--VELQDASNGDAKDFVDSVK 387
Query: 473 DRVF 476
+ +F
Sbjct: 388 EEIF 391
>gi|392941128|ref|ZP_10306772.1| LOW QUALITY PROTEIN: (p)ppGpp synthetase, RelA/SpoT family
[Thermoanaerobacter siderophilus SR4]
gi|392292878|gb|EIW01322.1| LOW QUALITY PROTEIN: (p)ppGpp synthetase, RelA/SpoT family
[Thermoanaerobacter siderophilus SR4]
Length = 719
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/331 (34%), Positives = 174/331 (52%), Gaps = 37/331 (11%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL++D I+AGLL V+E V+ Q+ + G A L+ ++ +
Sbjct: 49 IEVAYILADLELDITTIAAGLLHDVIEDTDVTYDQLMENFGKEIADLVDGVTKL-GKIEY 107
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K +V ++ A +RK + DIR +++ LA RL MR L YLP +Q + E ++I+
Sbjct: 108 KSKV--EQQAENMRKMLIAMAKDIRVILIKLADRLHNMRTLKYLPLDKQKEKAEETLEIY 165
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSY--LFVDTWLRSHETGSKPLIDIYKEQLLQCL 290
AP+AH + + + +ELEDL RYL P Y L + E +E+ +Q +
Sbjct: 166 APIAHRLGISKIKWELEDLCLRYLHPEEYYDLVEKVAAKRKE----------REEFIQNI 215
Query: 291 KTDATLADLVEDVSVQ----GRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLV 346
T T+ + ++++ +Q GR K YS KK+ + E++ D+L +R+I V
Sbjct: 216 IT--TIKEKLKEMGIQAEVDGRPKHFYSIYKKMKTQNKTFEQIYDLLAVRII-------V 266
Query: 347 NTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLME 406
NT + CY I+ +LWK +P R KDYIA PK N Y+SLH V + G+ E
Sbjct: 267 NTV----KDCYGVLGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTV-IGPKGEP---FE 318
Query: 407 IQIRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
IQIRT EM A G A+H YK G T +E
Sbjct: 319 IQIRTWEMHKTAEYGIAAHWKYKEGKTTEDE 349
>gi|257126707|ref|YP_003164821.1| (p)ppGpp synthetase I SpoT/RelA [Leptotrichia buccalis C-1013-b]
gi|257050646|gb|ACV39830.1| (p)ppGpp synthetase I, SpoT/RelA [Leptotrichia buccalis C-1013-b]
Length = 758
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 176/329 (53%), Gaps = 31/329 (9%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN---N 170
+ VA +LAD++MD + I AGLL VVE +++ + + G L+ +++N N
Sbjct: 92 VEVAEILADMKMDTDTIVAGLLHDVVEDTQITLADIEYQFGSDVKKLVDGVTKLRNLPRN 151
Query: 171 VNLKLQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMK 230
+ K++ A R D+R +I+ LA RL MR L ++ +QL S E ++
Sbjct: 152 FSRKVENTRKMVVAMSR-------DVRVVIIKLADRLHNMRTLKFMKPEKQLEKSNETIE 204
Query: 231 IHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCL 290
I+AP+AH + + +ELED+SFR+L+P Y + + H + + Y E+ ++ +
Sbjct: 205 IYAPIAHRIGMARMKWELEDISFRFLYPKEYYEI----KEHVNSKRREREEYTEKFIKKI 260
Query: 291 KTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSE 350
K + ++ +V+ GR K YS +K++K + ++ D++ +R+I++ +
Sbjct: 261 KLELEKNNIKAEVT--GRPKHLYSIYRKMIKKQKRFVDLYDLIAIRIIVEEKT------- 311
Query: 351 VGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIR 410
CY+ +I +L++ + R KDYI+RPK NGY+S+H V DN +EIQIR
Sbjct: 312 ----ECYSVLGVIHNLFEPVFERFKDYISRPKINGYQSVHTTVKGPDNQN----VEIQIR 363
Query: 411 TEEMDMLAVNGTASHAFYKGGLTNPEEAK 439
TE+M +A G A+H YK + ++ K
Sbjct: 364 TEKMHEIAEEGVAAHWKYKENKSKSKDEK 392
>gi|403384230|ref|ZP_10926287.1| GTP pyrophosphokinase [Kurthia sp. JC30]
Length = 730
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/323 (33%), Positives = 161/323 (49%), Gaps = 25/323 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +LADLQMD E +SAG L VVE V+ + ++ G A L+ ++
Sbjct: 51 IVHPVQVAGILADLQMDPETVSAGFLHDVVEDTEVTRDDLVEQFGEEVAMLVDGVTKLGK 110
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+K + ++ A RK F DIR +++ LA RL MR L +LP +Q IS E
Sbjct: 111 ---IKYKSKKEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPVEKQRRISKET 167
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I APLAH + + + +ELED + RYL P Y + ++ T + + +++
Sbjct: 168 LEIFAPLAHRLGISAIKWELEDTALRYLNPQQYYRIVNLMKRKRTEREAYLKNVMDEI-- 225
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L D+ + GR K YS KK+ + E+ D+L +RV++ +
Sbjct: 226 ----HGQLGDVDIQAELSGRPKHIYSIYKKMQSQHKQFNEIYDLLAIRVLVDSIKD---- 277
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY I+ +LWK MP R KDYIA PK N Y+SLH V G +E+Q
Sbjct: 278 -------CYAVLGIVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV----IGPYGDPLEVQ 326
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IRT EM +A G A+H YK G
Sbjct: 327 IRTNEMHNIAEYGVAAHWAYKEG 349
>gi|260662208|ref|ZP_05863104.1| GTP pyrophosphokinase [Lactobacillus fermentum 28-3-CHN]
gi|260553591|gb|EEX26483.1| GTP pyrophosphokinase [Lactobacillus fermentum 28-3-CHN]
Length = 744
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 143/483 (29%), Positives = 232/483 (48%), Gaps = 66/483 (13%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD E + AG + +VE G ++ +++ G A ++ ++ +
Sbjct: 55 IQVAGILAELKMDPETVCAGYMHDLVEDTGATLDDIKELFGPTIAMIVDGDTKISK---I 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ ++ A RK L DIR +I+ LA RL MR L +L +Q IS E ++I+
Sbjct: 112 HYKSNKEQMAETHRKLLLAMSKDIRVMIVKLADRLHNMRTLKHLRPDKQRRISNETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+A + + + +ELEDLS RYL P Y + + S ID Y ++ +K
Sbjct: 172 APIADRLGISTIKWELEDLSLRYLNPQQYYRIVHLMNSRRDQR---ID-YISAAIKVVKM 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
DL +V + GR K YS +K++ + ++ D+L +RV++ +
Sbjct: 228 AIADLDLGPNVEIYGRPKHIYSVYRKMVTQHKQFSQIYDLLAIRVVVDSIKD-------- 279
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + W MP R KDYIA PKANGY+SLH V + G RPL EIQIRT
Sbjct: 280 ---CYAVLGAIHTSWTPMPGRFKDYIAMPKANGYQSLHTTV-IGPEG--RPL-EIQIRTH 332
Query: 413 EMDMLAVNGTASHAFYKGGLTN-----PEEAKRLKAIMLAAAELAALRLKDIPSTNH-KG 466
+M +A G A+H YK G TN +++K+L + E+ LR + + +G
Sbjct: 333 QMHEVAEYGVAAHWAYKEGKTNGVDQASQDSKKLNVV----KEILELRSESNGTDEFMQG 388
Query: 467 FEFD-WRDRVFRLLDKNGD------GRISIEELMEVMEELGAPGEDAR------------ 507
+ D + D+V+ K GD G ++ ++ E+G A+
Sbjct: 389 IQSDVFADKVYAFTPK-GDAIEMPKGAGPLDMAYQIHTEVGNHTTGAKVNGRIIPLNYEI 447
Query: 508 ---EMMQLLDSNSDGSLSSDEFDLF------QKQVEFMRNLEDRDD---EYRTMLDEKLQ 555
+++ +L S+S S D DL K +F R DR++ E R +++++L+
Sbjct: 448 KNGDIVDILTSSSSAGPSRDWMDLVSTRRARNKIRQFFRT-HDREENVIEGRRIMEQQLR 506
Query: 556 MAG 558
AG
Sbjct: 507 DAG 509
>gi|383759423|ref|YP_005438408.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3'-pyrophosphohydrolase SpoT [Rubrivivax gelatinosus
IL144]
gi|381380092|dbj|BAL96909.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3'-pyrophosphohydrolase SpoT [Rubrivivax gelatinosus
IL144]
Length = 760
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/390 (29%), Positives = 197/390 (50%), Gaps = 43/390 (11%)
Query: 67 AFNELTERMNVLSSSSSRLLFKALKLSIPM------LQSLPLSPDSRSPLTKALSVALLL 120
+F LT+++ LS +L+ +A K + LP +T L+VA L
Sbjct: 33 SFAGLTDKLAYLSKGDLKLVREAYKFADEAHLGQFRASGLPY-------ITHPLAVAGLC 85
Query: 121 ADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDD 180
AD ++D + + A LL +E GV+ ++ +R G TA L+ ++ L+ ++
Sbjct: 86 ADWRLDVQAVMAALLHDTIEDQGVTKTELIERFGAPTADLVDGLTKLDK---LQFSTREE 142
Query: 181 ETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAV 239
A + RK L D+R +++ LA RL MR +D + ++ I+ E ++I+AP+AH +
Sbjct: 143 SQAESFRKMLLAMARDVRVILVKLADRLHNMRMMDAMAANKRSRIARETLEIYAPIAHRL 202
Query: 240 ATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADL 299
N EL++LSF+YL P+ + + ++ Y+ +++ ++ D A
Sbjct: 203 GLNQTYRELQELSFQYLHPWRHGALAKAIKRARG--------YRRDIVERVQRDVERAFG 254
Query: 300 VE--DVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACY 357
+ V V GR K+ YS +K+ + +VND+ G R+++ CY
Sbjct: 255 AQKMKVEVTGREKTVYSIYRKMREKHAGFAQVNDIFGFRIVVATLPE-----------CY 303
Query: 358 TTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDML 417
++ L+K +P R KDYIA PKANGY+SLH + VS G +E Q+RT+EM +
Sbjct: 304 LAIGVLHQLYKPVPGRFKDYIAIPKANGYQSLHTTL-VSPLGTA---VEFQVRTDEMHAV 359
Query: 418 AVNGTASHAFYK-GGLTNPEEAKRLKAIML 446
A G A+H YK G ++ +EA+R+ A+ L
Sbjct: 360 AERGIAAHWIYKTNGKSDSQEAQRMGALWL 389
>gi|354586442|ref|ZP_09004929.1| (p)ppGpp synthetase I, SpoT/RelA [Paenibacillus lactis 154]
gi|353180975|gb|EHB46516.1| (p)ppGpp synthetase I, SpoT/RelA [Paenibacillus lactis 154]
Length = 726
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/317 (34%), Positives = 163/317 (51%), Gaps = 25/317 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA ++ ++QMD I A LL VVE VS+ ++R+R G A L+ +++ +
Sbjct: 49 LAVADIVVNMQMDTLSIIAALLHDVVEDTTVSLDEIRERFGDTCAMLVDGLTKLER---I 105
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ RK F DIR +++ LA RL MR L Y Q IS E ++I
Sbjct: 106 QFRSKEEQQNENYRKMFIAMARDIRVIVIKLADRLHNMRTLKYQSEESQRRISYETLEIF 165
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
P+AH + + + +E+ED++ RYL P Y + + + ID ++ C++
Sbjct: 166 CPIAHRLGISAIKWEMEDIALRYLNPQQYYRIANLMHKKRAEREQYID----NVIVCIRE 221
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ D+S GR K YS KK+ + E+ D+L +R+I+ N+
Sbjct: 222 KLDEMGIQADLS--GRPKHIYSVFKKMTVKNKQFNEIYDLLAIRIIV---DNI------- 269
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY T II +LWK MP R KDYIA PK N Y+SLH V V NG+ E+QIRT
Sbjct: 270 -KDCYATLGIIHTLWKPMPGRFKDYIAMPKTNMYQSLHTTV-VGPNGEP---TEVQIRTW 324
Query: 413 EMDMLAVNGTASHAFYK 429
EM A G A+H YK
Sbjct: 325 EMHRTAEYGIAAHWAYK 341
>gi|347753839|ref|YP_004861403.1| (p)ppGpp synthetase RelA/SpoT family [Candidatus
Chloracidobacterium thermophilum B]
gi|347586357|gb|AEP10887.1| (p)ppGpp synthetase, RelA/SpoT family [Candidatus
Chloracidobacterium thermophilum B]
Length = 731
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/351 (32%), Positives = 183/351 (52%), Gaps = 28/351 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L L+VA +LA++++D ++ GLL VVE V+++++ + G AHL+ ++ N
Sbjct: 46 LMHPLAVAYILAEMRLDVICVTTGLLHDVVEDTHVTLEELEQQFGPEIAHLVDGLTKISN 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ +D A +RK L D IR +++ LA RL MR LDYLP ++ + E
Sbjct: 106 ---IEYTSREDRQAETVRKMLLAMVDDIRVVLVKLADRLHNMRTLDYLPPEKRAAKAQET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+AP+AH + + ELEDLSF+YL+P Y + + L + + + L +
Sbjct: 163 LDIYAPIAHRLGMGKIRGELEDLSFQYLYPDDYQHLKSILDQRRPALEADLAHVRATLQE 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L V+ V +QGR K YS +KL + ++V D++ +RVI T
Sbjct: 223 KLPEHN-----VKVVEIQGRIKRLYSLYRKLKERAISIDQVYDLMAVRVI---------T 268
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
++ + CY ++ ++WK +P R KD+I P+ N Y+SLH +V V D G E+Q
Sbjct: 269 QDIAD--CYAAVGVVHNIWKPIPGRFKDWIGIPRNNLYQSLHTSV-VGDIGHP---FEVQ 322
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLT----NPEEAKRLKAIMLAAAELAALR 455
IRT EM +A G A+H YK G + +PE LK ++ E++ R
Sbjct: 323 IRTAEMHKIAEEGIAAHWRYKEGRSAVKEDPETYAWLKRLVEWQQEVSDSR 373
>gi|294783445|ref|ZP_06748769.1| GTP diphosphokinase [Fusobacterium sp. 1_1_41FAA]
gi|294480323|gb|EFG28100.1| GTP diphosphokinase [Fusobacterium sp. 1_1_41FAA]
Length = 725
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 169/320 (52%), Gaps = 33/320 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L D++MD + + AGLL VVE + I ++ G A L+
Sbjct: 51 VEVAKILMDMKMDTDTVVAGLLHDVVEDTLIPIADIKYNFGDTVAVLVDGVT-------- 102
Query: 174 KLQVLDDET---AAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVM 229
KL+ L + T A +RK L +IR +++ LA RL MR L ++ +Q IS E +
Sbjct: 103 KLKALPNGTKNQAENIRKMILAMAENIRVILIKLADRLHNMRTLKFMKPEKQQAISKETL 162
Query: 230 KIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQC 289
I+APLAH + + ELEDLSF YL YL + + + + K ID ++
Sbjct: 163 DIYAPLAHRLGMAKIKSELEDLSFSYLHHEEYLEIKRLVENTKEERKDYID----NFIRT 218
Query: 290 LKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTS 349
+K TL DL V+GR+K YS KK+ + G+ +++ D++G+RVI++ +
Sbjct: 219 MK--RTLVDLGLKAEVKGRFKHFYSIYKKMYQKGKEFDDIYDLMGVRVIVEDKA------ 270
Query: 350 EVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQI 409
ACY I+ S + +P R KDYIA PK+N Y+S+H + V GK +EIQI
Sbjct: 271 -----ACYHILGIVHSQYTPVPGRFKDYIAVPKSNNYQSIHTTI-VGPLGK---FIEIQI 321
Query: 410 RTEEMDMLAVNGTASHAFYK 429
RT++MD +A G A+H YK
Sbjct: 322 RTKDMDDIAEEGIAAHWNYK 341
>gi|418406564|ref|ZP_12979883.1| GTP pyrophosphohydrolase/synthetase [Agrobacterium tumefaciens 5A]
gi|358007057|gb|EHJ99380.1| GTP pyrophosphohydrolase/synthetase [Agrobacterium tumefaciens 5A]
Length = 744
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 167/325 (51%), Gaps = 28/325 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ L VA +L ++ +D I+ LL +E + ++ + G L+ ++K
Sbjct: 46 ISHPLEVAAILTEMHLDESTIAVALLHDTIEDTTATRAEIDELFGEDIGRLVEGLTKLKK 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L L + A LRK L D +R L++ LA RL MR ++Y+P ++ IS E
Sbjct: 106 ---LDLVTRKAKQAENLRKLLLAISDDVRVLLVKLADRLHNMRTMEYMPADKRSRISEET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLA + + ELEDLSFRYL P +Y V L+ ET ++ LI +++L +
Sbjct: 163 MEIYAPLAGRMGMQDMRDELEDLSFRYLNPEAYETVTNRLQELETRNEGLIKKIEDELRE 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIK--PSSNLV 346
L + L SV+GR K YS +K+ E+++DV G R+++ PS
Sbjct: 223 LLVANGLLG-----ASVKGRQKKPYSVFRKMQSKSLSFEQLSDVYGFRILVDDIPS---- 273
Query: 347 NTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLME 406
CY I+ + W+ +P R KDYI+ PK N YRS+H + G +R +E
Sbjct: 274 ---------CYRALGIVHTRWRVVPGRFKDYISTPKQNDYRSIHTTI----VGPSRQRIE 320
Query: 407 IQIRTEEMDMLAVNGTASHAFYKGG 431
+Q+RT+ M +A G A+HA YK G
Sbjct: 321 LQLRTKRMHEIAEFGIAAHALYKDG 345
>gi|425737468|ref|ZP_18855741.1| GTP pyrophosphokinase [Staphylococcus massiliensis S46]
gi|425482816|gb|EKU49972.1| GTP pyrophosphokinase [Staphylococcus massiliensis S46]
Length = 729
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 169/319 (52%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + V+ A ++ ++K +
Sbjct: 55 IQVAGILTEMRLDGPTIVAGFLHDVIEDTSYTFDDVKGIFNEEIARIVDGVTKLKK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 112 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED++ RY+ Y + ++ + + I + ++ ++
Sbjct: 172 APLAHRLGINTIKWELEDIALRYIDNMQYFRIVNLMKKKRSEREDYI----QNAIKNIRQ 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ + + D+S GR K YS +K++K + E++ D+L +RVI+ +
Sbjct: 228 EMDVMSISGDIS--GRPKHIYSIYRKMMKQKKQFEQIFDLLAVRVIVNSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 278 ---CYAVLGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTV-VGPNGD--PL-EIQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM +A +G A+H YK G
Sbjct: 331 EMHEIAEHGVAAHWAYKEG 349
>gi|374325387|ref|YP_005078516.1| GTP pyrophosphokinase [Paenibacillus terrae HPL-003]
gi|357204396|gb|AET62293.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)
[Paenibacillus terrae HPL-003]
Length = 725
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 163/319 (51%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA ++ ++QMD I A LL VVE VS+ Q+R+ G T +L + L +
Sbjct: 49 LAVADIVVNMQMDTISIIAALLHDVVEDTTVSLAQIREHFG-DTCGMLVDGLTKLERIQF 107
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ RK F DIR +++ LA RL MR L Y Q I+ E ++I
Sbjct: 108 RSK--EEQQNENYRKMFIAMAQDIRVIVIKLADRLHNMRTLKYQSEESQRRIAYETLEIF 165
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
P+A+ + + + +E+ED++ RYL P Y + + + ID E++ + L+
Sbjct: 166 CPIANRLGISAIKWEMEDIALRYLNPQQYYRIANLMHKKRAEREQFIDNVIERIAEKLEE 225
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
ADL GR K YS KK+ + E+ D+L +R+I+ N+
Sbjct: 226 MGIQADL------SGRPKHIYSVFKKMTTKNKQFNEIYDLLAIRIIV---DNI------- 269
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY T II +LWK MP R KDYIA PKAN Y+SLH V V NG+ E+QIRT
Sbjct: 270 -KDCYATLGIIHTLWKPMPGRFKDYIAMPKANMYQSLHTTV-VGPNGEP---TEVQIRTV 324
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M A G A+H YK G
Sbjct: 325 DMHRTAEFGIAAHWAYKEG 343
>gi|386347702|ref|YP_006045951.1| (p)ppGpp synthetase I SpoT/RelA [Spirochaeta thermophila DSM 6578]
gi|339412669|gb|AEJ62234.1| (p)ppGpp synthetase I, SpoT/RelA [Spirochaeta thermophila DSM 6578]
Length = 662
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/330 (35%), Positives = 173/330 (52%), Gaps = 35/330 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLH-----ES 164
++ L VA +LADL MD + A LL +E G + ++ R G A L+ S
Sbjct: 49 ISHPLEVARILADLGMDTGTLIAALLHDTIEDTGATRDEIASRFGEEVALLVEGVTKISS 108
Query: 165 LRVKNNVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLM 223
LR +N K+Q A ++RK L DIR +++ LA +L MR L YLP +Q
Sbjct: 109 LRARNR---KIQ-----AAESIRKMLLAMAKDIRVILIKLADKLHNMRTLQYLPPAKQKA 160
Query: 224 ISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYK 283
I+ E ++I+APLA + + L ELEDL+ ++L P Y ++ ++ L+
Sbjct: 161 IATECLEIYAPLAERLGMSSLKDELEDLALKHLQPEVYAEIEHYVNERIEARTALL---- 216
Query: 284 EQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSS 343
E++ + +K +A + V +Q R K YS +K+ + R EE+ DVLG+R+
Sbjct: 217 EEVARTIKKEAGREGI--KVEIQMRRKHLYSIYQKMKRKARPLEEIYDVLGIRL------ 268
Query: 344 NLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRP 403
L NT E CYT I+ L+K + R KDYIA PKAN Y+SLH V V G T
Sbjct: 269 -LCNT----ETECYTLLGIVHRLYKPLEGRFKDYIAMPKANRYQSLHTTVMVP--GGT-- 319
Query: 404 LMEIQIRTEEMDMLAVNGTASHAFYKGGLT 433
L+E+QIRT +M A G A+H YK G++
Sbjct: 320 LVEVQIRTHQMHRTAEYGIAAHWLYKEGIS 349
>gi|357634035|ref|ZP_09131913.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio sp. FW1012B]
gi|357582589|gb|EHJ47922.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio sp. FW1012B]
Length = 738
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 183/349 (52%), Gaps = 31/349 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L+ L A +LAD+++DA ++AGLL VE ++ ++ + G A ++ ++
Sbjct: 46 LSHPLEAAGILADMRLDAASVAAGLLHDTVEDTKATVDEIEELFGDEVADIVDGVTKISL 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + ++ A +RK L DIR +++ LA RL MR L++ ++ +I+ E
Sbjct: 106 ---IPFESKEEAQAENIRKMILAMANDIRVVLVKLADRLHNMRTLEFQKPVKRALIAQET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M I+APLA+ + + + ELEDLSF+YL P Y + + H T + I+ Q+ Q
Sbjct: 163 MDIYAPLANRLGLHRIKTELEDLSFKYLKPDVYSQIKAGVDRHHTLDESYIERVIGQIRQ 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ + A ++ GR K +S K+ G ++V+D++ RV+++
Sbjct: 223 MVGENNIKARII------GRRKHLWSVFNKMRVQGLTIDQVHDLVAFRVLVETI------ 270
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY+ ++ S+WK +P R KDYI+ PKAN Y+SLH V V +G+ +EIQ
Sbjct: 271 -----RECYSVLGLVHSIWKPVPGRFKDYISMPKANMYQSLHTTV-VGPDGER---IEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK---GGLTNPEEAKR---LKAIMLAAAEL 451
IRT EM+ LA G A+H YK G NP++ +R L+ IM EL
Sbjct: 322 IRTVEMNRLAEEGVAAHWKYKEREKGKFNPKDVERFTWLRQIMDWQREL 370
>gi|15613805|ref|NP_242108.1| GTP pyrophosphokinase [Bacillus halodurans C-125]
gi|10173858|dbj|BAB04961.1| GTP pyrophosphokinase (stringent response) [Bacillus halodurans
C-125]
Length = 728
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/329 (34%), Positives = 171/329 (51%), Gaps = 27/329 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA ++ DL++D ++A L VVE V+++ + A L+ V +
Sbjct: 53 VQVAGIIVDLELDPNTVAAAFLHDVVEDTDVTVEALEKEFNEQVAMLVD---GVTKLKKI 109
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK + DIR +++ LA RL MR L Y+P +Q + S E ++I
Sbjct: 110 KYKSKEEQQAENHRKMLVAMAKDIRVILIKLADRLHNMRTLRYMPPEKQRITSNETLEIF 169
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED++ RYL P Y + ++ + Y E ++ K
Sbjct: 170 APLAHRLGISTIKWELEDIALRYLDPQQYYRIVNLMKKKRAEREE----YIEDVID--KI 223
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
L D+ + + GR K YS +K++ + E+ D+L +R+I+K N+
Sbjct: 224 RKQLQDIKVEAEISGRPKHIYSIYRKMVLQNKQFNEIYDLLAVRIIVK---NI------- 273
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY +I + WK MP R KDYIA PKAN Y+SLH V V NG PL E+QIRTE
Sbjct: 274 -KDCYAGLGVIHTCWKPMPGRFKDYIAMPKANMYQSLHTTV-VGPNGD--PL-EVQIRTE 328
Query: 413 EMDMLAVNGTASHAFYKGG--LTNPEEAK 439
EM +A G A+H YK G L NP E K
Sbjct: 329 EMHRVAEYGVAAHWAYKEGTTLANPMEDK 357
>gi|340753531|ref|ZP_08690310.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium sp. 2_1_31]
gi|422316887|ref|ZP_16398262.1| RelA/SpoT family protein [Fusobacterium periodonticum D10]
gi|229423101|gb|EEO38148.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium sp. 2_1_31]
gi|404590479|gb|EKA92877.1| RelA/SpoT family protein [Fusobacterium periodonticum D10]
Length = 725
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 169/320 (52%), Gaps = 33/320 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L D++MD + + AGLL VVE + I ++ G A L+
Sbjct: 51 VEVAKILMDMKMDTDTVVAGLLHDVVEDTLIPIADIKYNFGDTVAVLVDGVT-------- 102
Query: 174 KLQVLDDET---AAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVM 229
KL+ L + T A +RK L +IR +++ LA RL MR L ++ +Q IS E +
Sbjct: 103 KLKALPNGTKNQAENIRKMILAMAENIRVILIKLADRLHNMRTLKFMKPEKQQAISKETL 162
Query: 230 KIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQC 289
I+APLAH + + ELEDLSF YL YL + + + + K Y E ++
Sbjct: 163 DIYAPLAHRLGMAKIKSELEDLSFSYLHHEEYLEIKRLVENTKEERKD----YIENFIRT 218
Query: 290 LKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTS 349
+K TL DL V+GR+K YS KK+ + G+ +++ D++G+RVI++ +
Sbjct: 219 MKR--TLVDLGLKAEVKGRFKHFYSIYKKMYQKGKEFDDIYDLMGVRVIVEDKA------ 270
Query: 350 EVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQI 409
ACY I+ S + +P R KDYIA PK+N Y+S+H + V GK +EIQI
Sbjct: 271 -----ACYHILGIVHSQYTPVPGRFKDYIAVPKSNNYQSIHTTI-VGPLGK---FIEIQI 321
Query: 410 RTEEMDMLAVNGTASHAFYK 429
RT++MD +A G A+H YK
Sbjct: 322 RTKDMDDIAEEGIAAHWNYK 341
>gi|188585914|ref|YP_001917459.1| (p)ppGpp synthetase I SpoT/RelA [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350601|gb|ACB84871.1| (p)ppGpp synthetase I, SpoT/RelA [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 729
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 181/335 (54%), Gaps = 29/335 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VAL+LADL++D + ISAGLL V+E + +++ + G LL + + +
Sbjct: 51 IVHPIEVALVLADLELDLDTISAGLLHDVMEDTPATREELEELFG-DEITLLVDGVTKLS 109
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+N K + ++ A LRK F DIR +++ LA R MR L+YLP +Q I+ E
Sbjct: 110 RLNFKTK--EEHQAENLRKMFFAMANDIRVILIKLADRTHNMRTLNYLPERKQKEIAKET 167
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLA+ + + +ELEDL+FRY+ P Y ++ + + +E+ ++
Sbjct: 168 MEIYAPLANRLGIYKIKWELEDLAFRYIEPEQYYYLADRIVQKR--------MEREEYIK 219
Query: 289 CLKTD--ATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLV 346
+K D L ++ D + GR K YS K+ K G+ E+ D++ LR+I+ +N+
Sbjct: 220 KIKVDLRDKLKEMGIDGEIHGRPKHLYSIYSKMKKTGKDLNEIYDLIALRIIV---NNV- 275
Query: 347 NTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLME 406
+ CY + ++WK +P R KDYIA PK+N Y+SLH V + G L+E
Sbjct: 276 -------KDCYAVLGTVHTMWKPVPGRFKDYIAVPKSNMYQSLHTTV-LCPQGN---LVE 324
Query: 407 IQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRL 441
IQIRT +M A G A+H YK + + A+++
Sbjct: 325 IQIRTWDMHKTAEYGIAAHWKYKENTDDKKFAEKV 359
>gi|392972298|ref|ZP_10337690.1| GTP pyrophosphokinase [Staphylococcus equorum subsp. equorum Mu2]
gi|403046373|ref|ZP_10901844.1| GTP pyrophosphokinase [Staphylococcus sp. OJ82]
gi|392510011|emb|CCI60993.1| GTP pyrophosphokinase [Staphylococcus equorum subsp. equorum Mu2]
gi|402763873|gb|EJX17964.1| GTP pyrophosphokinase [Staphylococcus sp. OJ82]
Length = 729
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 177/340 (52%), Gaps = 25/340 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++ +D I AG L V+E + V+ A ++ ++K +
Sbjct: 55 IQVAGILTEMHLDGPTIVAGFLHDVIEDTPYTFDDVQGMFNEEIAVIVEGVTKLKK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR + +PR +Q+ IS E ++I+
Sbjct: 112 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTIKPMPREKQIRISKETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I + + ++
Sbjct: 172 APLAHRLGINTIKWELEDTALRYIDSVQYFRIVNLMKKKRSEREDYI----QNAINRIQA 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
D + ++V +++ GR K YS +K++K + +++ D+L +R+I+ N +N
Sbjct: 228 DMSSMNIVGEIN--GRPKHIYSIYRKMVKQKKQFDQIFDLLAVRIIV----NSIND---- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 278 ---CYAVLGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTV-VGPNGD--PL-EIQIRTS 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELA 452
EM +A +G A+H YK G E+A+ + E A
Sbjct: 331 EMHEIAEHGVAAHWAYKEGKKVTEKAQNFNKKLNWIKEFA 370
>gi|403668327|ref|ZP_10933602.1| GTP pyrophosphokinase [Kurthia sp. JC8E]
Length = 730
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/323 (33%), Positives = 163/323 (50%), Gaps = 25/323 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +LA+LQMD E +SAG L VVE V+ + + ++ G A L+ ++
Sbjct: 51 IVHPIQVAGILAELQMDPETVSAGFLHDVVEDTSVTREDLVEQFGEEVAMLVDGVTKLGK 110
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+K + ++ A RK F DIR +++ LA RL MR L +LP +Q IS E
Sbjct: 111 ---IKYKSKKEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPVEKQRRISKET 167
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I APLAH + + + +ELED + RYL P Y + ++ T + + +++ +
Sbjct: 168 LEIFAPLAHRLGISAIKWELEDTALRYLNPQQYYRIVNLMKRKRTEREAYLQNVMDEITE 227
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L + ADL GR K YS K+ + E+ D+L +RVI+ +
Sbjct: 228 QLDDVSIPADL------SGRPKHIYSIYNKMQSQHKQFNEIYDLLAVRVIVDSIKD---- 277
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY I+ +LWK MP R KDYIA PK N Y+SLH V G +E+Q
Sbjct: 278 -------CYAVLGIVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV----IGPYGDPLEVQ 326
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IRT+ M +A G A+H YK G
Sbjct: 327 IRTKSMHNIAEFGVAAHWAYKEG 349
>gi|397569561|gb|EJK46819.1| hypothetical protein THAOC_34498 [Thalassiosira oceanica]
Length = 989
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/378 (31%), Positives = 189/378 (50%), Gaps = 17/378 (4%)
Query: 62 VKLVGAFNELTERMNVLSSSSSRLLFKALKLSIPMLQSLPLSPDSRSP-LTKALSVALLL 120
V++ G +++L ++ L + ++ + KAL+++ P S P + + VALLL
Sbjct: 256 VEVEGYWDQLLPTVSYLGTENAAKIKKALRVA--YCAHRPQKRKSGEPYIIHPVEVALLL 313
Query: 121 ADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDD 180
+ ++MDA+ + AGLL VE ++ +Q+ G +++ +V L D
Sbjct: 314 SGMKMDADTVMAGLLHDTVEDTDLTFEQIEAMFGTEVKNIVEGETKVSKLPKLAFADYAD 373
Query: 181 ETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAV 239
E A LR+ F D R +I+ LA RL MR L ++ +Q IS E + I APLAH +
Sbjct: 374 EQAENLRQMFIAMTDDYRIIIVKLADRLHNMRTLRHMKPAKQQKISRETLDIFAPLAHRM 433
Query: 240 ATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADL 299
ELED +F YL+P Y ++ LR + + + L + L++D T+
Sbjct: 434 GLWPFKSELEDTAFMYLYPDEYTRLNQRLRLRQKKFEETLTNTVNALEKTLQSDPTIQSQ 493
Query: 300 VEDVSVQGRYKSRYSTMKKL-LKDGRIPEEVNDVLGLRVIIKPSSNLV-----NTSEVGE 353
++ V GR K YS K+ +K R + + D++ LRVI+ P + ++ G
Sbjct: 494 DVEIEVVGRTKELYSLWHKMEMKHDRNLDHITDLVALRVILTPRGKSKGGADGDPADSGT 553
Query: 354 RACYTTREIIQSL--WKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRT 411
CY ++Q L ++ MP + KDYI+ PK NGY+SLH A+ S +E+QIRT
Sbjct: 554 WLCYHVLGLVQHLPGFQPMPTKVKDYISFPKPNGYQSLHTALMYSGQS-----IEVQIRT 608
Query: 412 EEMDMLAVNGTASHAFYK 429
M +A G ASH YK
Sbjct: 609 AYMHQVAEYGMASHFAYK 626
>gi|41323484|gb|AAR99902.1| RelA [Agrobacterium tumefaciens]
Length = 744
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 167/325 (51%), Gaps = 28/325 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ L VA +L ++ +D I+ LL +E + ++ + G L+ ++K
Sbjct: 46 ISHPLEVAAILTEMHLDESTIAVALLHDTIEDTTATRAEIDELFGEDIGRLVEGLTKLKK 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L L + A LRK L D +R L++ LA RL MR ++Y+P ++ IS E
Sbjct: 106 ---LDLVTRKAKQAENLRKLLLAISDDVRVLLVKLADRLHNMRTMEYMPADKRSRISEET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLA + + ELEDLSFRYL P +Y V L+ ET ++ LI +++L +
Sbjct: 163 MEIYAPLAGRMGMQDMRDELEDLSFRYLNPEAYETVTNRLQELETRNEGLIKKIEDELRE 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIK--PSSNLV 346
L + L SV+GR K YS +K+ E+++DV G R+++ PS
Sbjct: 223 LLVANGLLG-----ASVKGRQKKPYSGFRKMQSKSLSFEQLSDVYGFRILVDDIPS---- 273
Query: 347 NTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLME 406
CY I+ + W+ +P R KDYI+ PK N YRS+H + G +R +E
Sbjct: 274 ---------CYRALGIVHTRWRVVPGRFKDYISTPKQNDYRSIHTTI----VGPSRQRIE 320
Query: 407 IQIRTEEMDMLAVNGTASHAFYKGG 431
+Q+RT+ M +A G A+HA YK G
Sbjct: 321 LQMRTKRMHEIAEFGIAAHALYKDG 345
>gi|256828245|ref|YP_003156973.1| (p)ppGpp synthetase I SpoT/RelA [Desulfomicrobium baculatum DSM
4028]
gi|256577421|gb|ACU88557.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfomicrobium baculatum DSM
4028]
Length = 715
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 171/338 (50%), Gaps = 34/338 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L+ L V+ +L DL++DA I AGLL VE VSI Q+ + G ++ ++
Sbjct: 46 LSHPLEVSNILVDLRLDAATIVAGLLHDTVEDTEVSIPQIVELFGPEVGAIVEGVTKISK 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +RK L D IR +++ LA RL + L++ Y+Q I+ E
Sbjct: 106 ---MNFESKEQAQAENIRKMILAMADDIRVILVKLADRLHNISTLEFQKEYKQRAIAQET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+APLA+ + + +LE+ RY+ P Y + + ++ + ID
Sbjct: 163 LGIYAPLANRLGLYRIKVQLENYGLRYMKPDVYAQISEGINRYQDQGQAYID-------- 214
Query: 289 CLKTDATLADLVEDVSVQGRYKSR----YSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSN 344
K A + D++ + + GR K R YS K+ + G +++ D++ RVI+ +N
Sbjct: 215 --KVSAMIQDVLAENEINGRVKGRIKHTYSIYHKMKQRGLTLDQIFDMIAFRVIV---NN 269
Query: 345 LVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPL 404
L R CYT ++ SLWK +P + KDYI+ PKAN Y+SLH V + G+
Sbjct: 270 L--------RECYTVLGLVHSLWKPVPGKFKDYISMPKANMYQSLHSTV-IGPEGER--- 317
Query: 405 MEIQIRTEEMDMLAVNGTASHAFYK-GGLTNPEEAKRL 441
+EIQIRTEEM LA NG A+H YK G +EA R
Sbjct: 318 IEIQIRTEEMHQLAENGVAAHWSYKEHGSKKAQEADRF 355
>gi|317128220|ref|YP_004094502.1| (p)ppGpp synthetase I SpoT/RelA [Bacillus cellulosilyticus DSM
2522]
gi|315473168|gb|ADU29771.1| (p)ppGpp synthetase I, SpoT/RelA [Bacillus cellulosilyticus DSM
2522]
Length = 726
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 164/321 (51%), Gaps = 25/321 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD + I+A L VVE V ++ + +R G A L+ ++ +
Sbjct: 49 VQVAGILVDLGMDPKTIAAAFLHDVVEDTDVKLEDLANRFGNEVAMLVDGVTKLGK---I 105
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP +Q I+ E ++I
Sbjct: 106 KYKSKEEQQAENHRKMFVAMAKDIRVILIKLADRLHNMRTLKHLPPEKQRRIANETLEIF 165
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED S RYL P Y + ++ + ID + ++ + L+
Sbjct: 166 APLAHRLGISKIKWELEDTSLRYLNPQQYYRIVNLMKKKRAEREDYIDEVQNKIRERLEG 225
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
A + GR K YS +K+ + E+ D+L +R+I+ +
Sbjct: 226 VGVQA------GIHGRAKHIYSIYRKMALQNKQFNEIYDLLAVRIIVNSIKD-------- 271
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+QIR+E
Sbjct: 272 ---CYAVLGIIHTQWKPMPGRFKDYIAMPKANMYQSLHTTV-IGPKGD--PL-EVQIRSE 324
Query: 413 EMDMLAVNGTASHAFYKGGLT 433
+M +A G A+H YK G T
Sbjct: 325 DMHKVAEFGVAAHWAYKEGKT 345
>gi|296270031|ref|YP_003652663.1| (p)ppGpp synthetase I [Thermobispora bispora DSM 43833]
gi|296092818|gb|ADG88770.1| (p)ppGpp synthetase I, SpoT/RelA [Thermobispora bispora DSM 43833]
Length = 786
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/337 (34%), Positives = 172/337 (51%), Gaps = 27/337 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LA+L D E + A LL VE S++Q+R G A L+ ++
Sbjct: 108 ITHPLAVATILAELGTDDETLCAALLHDTVEDTEYSLEQLRADFGENIARLVDGVTKLD- 166
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
K++ D A +RK + DIR L++ LA RL MR + Y+P ++ S E
Sbjct: 167 ----KVKYGDAAQAETVRKMIVAMSRDIRVLVIKLADRLHNMRTMRYMPEEKRKQKSRET 222
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I APLAH + N + +ELEDL+F L+P Y + + P D+Y +Q+++
Sbjct: 223 LEIFAPLAHRLGMNTIKWELEDLAFSMLYPKRYDEIARMVFER----APRRDLYLQQVIE 278
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
K A L + +V GR K YS +K++ G +++ D++G+RV LV+T
Sbjct: 279 --KVSADLREAKIKATVMGRPKHYYSIYQKMIAKGLAFDDIYDLVGIRV-------LVDT 329
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY I + WK +P R KDYIA PK N Y+SLH V + GK +E+Q
Sbjct: 330 V----RDCYAALGTIHARWKPVPGRFKDYIAMPKFNMYQSLHTTV-IGPEGKP---IELQ 381
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIM 445
IRT M A G A+H YK +T K +A M
Sbjct: 382 IRTHAMHKRAEYGVAAHWKYKEEMTASGGTKGKQADM 418
>gi|89100794|ref|ZP_01173647.1| GTP pyrophosphokinase [Bacillus sp. NRRL B-14911]
gi|89084497|gb|EAR63645.1| GTP pyrophosphokinase [Bacillus sp. NRRL B-14911]
Length = 731
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 165/321 (51%), Gaps = 25/321 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL+MD ++AG L VVE V++ + + A L+ ++ +
Sbjct: 55 IQVAGILADLEMDPSTVAAGFLHDVVEDTEVTLADISEAFNPEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP +Q IS E ++I
Sbjct: 112 KYKSQEEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPAEKQRRISNETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ ++Y E+++ +K
Sbjct: 172 APLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAER----ELYLEEVIGEMKG 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ D+S GR K YS +K+ + E+ D+L +R+++ +
Sbjct: 228 KMDEVSIRADLS--GRPKHIYSIYRKMALQNKQFNEIYDLLAVRIVVNSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+QIRT
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKANMYQSLHTTV-IGPKGD--PL-EVQIRTT 330
Query: 413 EMDMLAVNGTASHAFYKGGLT 433
EM +A G A+H YK G T
Sbjct: 331 EMHQIAEFGIAAHWAYKEGKT 351
>gi|258645309|ref|ZP_05732778.1| GTP diphosphokinase [Dialister invisus DSM 15470]
gi|260402658|gb|EEW96205.1| GTP diphosphokinase [Dialister invisus DSM 15470]
Length = 792
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 126/414 (30%), Positives = 204/414 (49%), Gaps = 33/414 (7%)
Query: 26 IPAPRLNSHSIRAESSSSSFAS----SPAPLPSTAGEK-MVVKLVGAFNELTERMN--VL 78
I + LN S+R ++S+S+ A + +G+K ++ +N+L E++ +
Sbjct: 21 ILSRNLNEESLRTDASASTLAEFLIHQDEYIKIESGKKDFSIETSHEYNKLMEKLKTYIH 80
Query: 79 SSSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQV 138
+ S + A +++ + + + L+VA +LA+L++DA+ I A LL V
Sbjct: 81 ETQSMETIRHAFEIAQKAHEG-QIRATGEPYIIHPLAVAYILAELEIDAQGIIAALLHDV 139
Query: 139 VESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRK-FCLTYYDIR 197
VE +++ +R G A ++ ++ + +D+ RK F DIR
Sbjct: 140 VEDTAYTLEDIRRIFGDEVAFIVDGITKLSQ---FHYKDKEDQQTENFRKMFLAMAQDIR 196
Query: 198 ALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLF 257
+++ LA RL MR L R +Q+ I+ E M+I+APLAH + + +ELEDL F YL
Sbjct: 197 VVVIKLADRLHNMRTLGIFRREKQIRIAKETMEIYAPLAHRLGIYNIKWELEDLCFHYLH 256
Query: 258 PFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMK 317
Y + +R + +++ E L Q + DA + ++ GR K YS K
Sbjct: 257 TEEYYDLVRQMRQKRKAREEIVNDTMEVLHQSI-NDAGIK-----ATITGRPKHFYSIYK 310
Query: 318 KLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDY 377
K+ +D + ++ D+ +RVI VNT CY I SLWK +P+R KDY
Sbjct: 311 KMKRDNKDLSQIYDLYAVRVI-------VNTIP----QCYAVLGIAHSLWKPLPNRFKDY 359
Query: 378 IARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGG 431
IA PK N Y+SLH V + K +P+ EIQIRT EM ++ G A+H YK G
Sbjct: 360 IAVPKPNMYQSLHTTVIGT---KGQPV-EIQIRTWEMHHISEYGVAAHWRYKEG 409
>gi|227499575|ref|ZP_03929682.1| GTP diphosphokinase [Anaerococcus tetradius ATCC 35098]
gi|227218334|gb|EEI83588.1| GTP diphosphokinase [Anaerococcus tetradius ATCC 35098]
Length = 726
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/321 (32%), Positives = 166/321 (51%), Gaps = 33/321 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
++VA L+++++D E I AGL+ V+E VS +Q+ + G L+ ++KN L
Sbjct: 55 IAVARKLSEMKLDDETICAGLMHDVLEDTDVSREQMAEVFGEEITFLVDGVTKLKN---L 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+++ A +RK + D+R +++ L+ RL M+ L+Y+ R +Q+ I+ E ++I+
Sbjct: 112 NYTSREEKQAENIRKMVMAMSNDVRVVLIKLSDRLHNMKTLEYMTRKKQIQIADETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYL----FVDTWLRSHETGSKPLIDIYKEQLLQ 288
PLAH + L +ELEDL FRY P Y V+ R E +ID +
Sbjct: 172 VPLAHRLGIYSLKWELEDLCFRYQEPEKYYELAEMVNVKRREREAYINEIIDTLSK---- 227
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+L+ + + GR KS YS KK+ ++G +E+ D+ +RVI+ +
Sbjct: 228 ------SLSGTNINFEISGRPKSLYSINKKMERNGIAFDEIYDLTAIRVIVDTIA----- 276
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + SLW+ +P+R KDYI +PK NGYRSLH V D +RP E+Q
Sbjct: 277 ------ECYAVLGKVHSLWRPIPNRIKDYIGQPKPNGYRSLHTTVFGED---SRPF-EVQ 326
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT +M G A+H YK
Sbjct: 327 IRTRKMHKECEYGVAAHWRYK 347
>gi|242373934|ref|ZP_04819508.1| GTP pyrophosphokinase [Staphylococcus epidermidis M23864:W1]
gi|242348358|gb|EES39960.1| GTP pyrophosphokinase [Staphylococcus epidermidis M23864:W1]
Length = 734
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/376 (30%), Positives = 187/376 (49%), Gaps = 26/376 (6%)
Query: 78 LSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQ 137
LS+S + K+ ++ Q + + + VA +L ++++D I AG L
Sbjct: 25 LSASEYEYVLKSYHIAYEAHQG-QFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHD 83
Query: 138 VVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRK-FCLTYYDI 196
V+E + + V+ A ++ ++K +K + +++ A RK F D+
Sbjct: 84 VIEDTPYTFEDVKSMFNEEVARIVDGVTKLKK---VKYRSKEEQQAENHRKLFIAIAKDV 140
Query: 197 RALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYL 256
R +++ LA RL MR L +PR +Q+ IS E ++I+APLAH + N + +ELED + RY+
Sbjct: 141 RVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELEDTALRYI 200
Query: 257 FPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTM 316
Y + ++ + + I K +A + + + GR K YS
Sbjct: 201 DSVQYFRIVNLMKKKRSEREAYI------ANAISKIEAEMDKMKLSGEISGRPKHIYSIY 254
Query: 317 KKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKD 376
+K++K + +++ D+L +RVI+ N +N CY ++ +LWK MP R KD
Sbjct: 255 RKMMKQKKQFDQIFDLLAIRVIV----NSIND-------CYAILGLVHTLWKPMPGRFKD 303
Query: 377 YIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNPE 436
YIA PK N Y+SLH V V NG PL EIQIRT EM +A +G A+H YK G T E
Sbjct: 304 YIAMPKQNMYQSLHTTV-VGPNGD--PL-EIQIRTYEMHEIAEHGVAAHWAYKEGKTVNE 359
Query: 437 EAKRLKAIMLAAAELA 452
+ + + + ELA
Sbjct: 360 KTQDFQNKLNWLKELA 375
>gi|160934229|ref|ZP_02081616.1| hypothetical protein CLOLEP_03100 [Clostridium leptum DSM 753]
gi|156866902|gb|EDO60274.1| RelA/SpoT family protein [Clostridium leptum DSM 753]
Length = 730
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 169/321 (52%), Gaps = 25/321 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+SVA +L +L MD E I A LL VVE V +++++ GI A+L ++ +
Sbjct: 61 VSVAYILVELGMDTESIVASLLHDVVEDTPVGLEEIKKLFGIEVANLTDGVTKLGR---I 117
Query: 174 KLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+++ A LRK + D IR +I+ LA RL MR ++++P ++ +LE M+++
Sbjct: 118 PYSSREEQQAENLRKMLIAMADDIRVIIIKLADRLHNMRTIEFMPDQKRRDKALETMEVY 177
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+AH + L E+ED+S RYL P Y +++ L + I+ K+Q+
Sbjct: 178 APIAHRLGIRALKEEMEDISLRYLDPIGYHEIESALAMKSGEREEFINKIKKQIYD---- 233
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
++ ++ +V ++GR KS +K+ G+ EE+ D+ +RVI+ ++
Sbjct: 234 --RVSSVIPNVHLEGRVKSINGIYRKVFVQGKSMEEIYDIYAVRVIVDSLND-------- 283
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY +I +++ +P+R KDYI+ PK N Y+SLH V GK E+QIRT
Sbjct: 284 ---CYNVLGMIHDMYRPIPNRFKDYISTPKPNLYQSLHTTV----LGKEGVPFEVQIRTW 336
Query: 413 EMDMLAVNGTASHAFYKGGLT 433
EM A G A+H YK GLT
Sbjct: 337 EMHHTAEYGIAAHWKYKLGLT 357
>gi|358051528|ref|ZP_09145719.1| GTP pyrophosphokinase [Staphylococcus simiae CCM 7213]
gi|357258969|gb|EHJ08835.1| GTP pyrophosphokinase [Staphylococcus simiae CCM 7213]
Length = 729
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/340 (32%), Positives = 180/340 (52%), Gaps = 25/340 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V++ A ++ ++K +
Sbjct: 55 IQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKEMFNEEVARIVDGVTKLKK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 112 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPRDKQIRISRETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I E+ + + T
Sbjct: 172 APLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREEYI----EKAIDKIST 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ + +++ GR K YS +K++K + +++ D+L +RVI+ N +N
Sbjct: 228 EMERMQIAGEIN--GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV----NSIND---- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 278 ---CYAVLGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTV-VGPNGD--PL-EIQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELA 452
+M +A +G A+H YK G T E+ + + + ELA
Sbjct: 331 DMHEIAEHGVAAHWAYKEGKTVNEKDQSYQNKLNWLKELA 370
>gi|306820100|ref|ZP_07453748.1| GTP diphosphokinase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304551878|gb|EFM39821.1| GTP diphosphokinase [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 739
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 166/331 (50%), Gaps = 31/331 (9%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L++D I+AGL+ VVE V+ Q++ G A L+ ++ +
Sbjct: 48 VEVANILAELELDVASIAAGLMHDVVEDTEVTSDQMKSMFGEEIAKLVDGVTKLGK---I 104
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ ++ A LRK F DIR +++ LA RL MR L ++P Y+ ++ S E ++I
Sbjct: 105 AYKTKEENQAENLRKMFMAMGDDIRVVLIKLADRLHNMRTLKFMPPYKAVIKSKETLEIF 164
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYL----FVDTWLRSHETGSKPLIDIYKEQLLQ 288
AP+A + + +E+ED++ RY P Y + L E+ +ID KE L +
Sbjct: 165 APIAERLGMFKIKWEMEDIALRYTEPDFYFDMRRQIMRRLYQRESYITDMIDFLKENLAK 224
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ + + GR K+ YS KK+ + EE+ D L +RVI++ +
Sbjct: 225 EIPNN--------HFEIYGREKNLYSIYKKMKFKNKAFEEIYDFLAIRVIVQTKAE---- 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY I+ +WK +P R KDYI PK N Y+SLH V G L+E+Q
Sbjct: 273 -------CYWVLGIVHGMWKPIPDRNKDYIGNPKVNNYQSLHTTV----FGPGGELVEVQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAK 439
IRTEEM A G A+H YK G +P E++
Sbjct: 322 IRTEEMHKTAEYGIAAHWKYKQGRIDPHESE 352
>gi|295428209|ref|ZP_06820841.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus EMRSA16]
gi|295128567|gb|EFG58201.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus EMRSA16]
Length = 736
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V++ A ++ ++K +
Sbjct: 62 IQVAGILTEMRLDGPTIVAGFLHDVIEDTSYTFEDVKEMFNEEVARIVDGVTKLKK---V 118
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 119 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIY 178
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I E + ++T
Sbjct: 179 APLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYI----ETAIDRIRT 234
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ D++ GR K YS +K++K + +++ D+L +RVI+ N +N
Sbjct: 235 EMDRMNIEGDIN--GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV----NSIND---- 284
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 285 ---CYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV-VGPNGD--PL-EIQIRTF 337
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A +G A+H YK G
Sbjct: 338 DMHEIAEHGVAAHWAYKEG 356
>gi|386394260|ref|ZP_10079041.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfovibrio sp. U5L]
gi|385735138|gb|EIG55336.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfovibrio sp. U5L]
Length = 737
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 182/349 (52%), Gaps = 31/349 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L+ L A +LAD+++DA ++AGLL VE ++ ++ + G A ++ ++
Sbjct: 46 LSHPLEAAGILADMRLDAASVAAGLLHDTVEDTKATVDEIEELFGDEVADIVDGVTKISL 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + ++ A +RK L DIR +++ LA RL MR L++ ++ +I+ E
Sbjct: 106 ---IPFESKEEAQAENIRKMILAMANDIRVVLVKLADRLHNMRTLEFQKPVKRALIAQET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M I+APLA+ + + + ELEDLSF+YL P Y + + H T + I+ Q+ Q
Sbjct: 163 MDIYAPLANRLGLHRIKTELEDLSFKYLKPDVYSQIKAGVDRHHTLDESYIERVIGQIRQ 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ + A ++ GR K +S K+ G ++V+D++ RV+++
Sbjct: 223 MVGENNIRARII------GRRKHLWSVFNKMRVQGLTIDQVHDLVAFRVLVETI------ 270
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY ++ S+WK +P R KDYI+ PKAN Y+SLH V V +G+ +EIQ
Sbjct: 271 -----RECYAVLGLVHSIWKPVPGRFKDYISMPKANMYQSLHTTV-VGPDGER---IEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK---GGLTNPEEAKR---LKAIMLAAAEL 451
IRT EM+ LA G A+H YK G NP++ +R L+ IM EL
Sbjct: 322 IRTVEMNRLAEEGVAAHWKYKEREKGKFNPKDVERFTWLRQIMDWQREL 370
>gi|222529929|ref|YP_002573811.1| (p)ppGpp synthetase I SpoT/RelA [Caldicellulosiruptor bescii DSM
6725]
gi|222456776|gb|ACM61038.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor bescii DSM
6725]
Length = 726
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 127/379 (33%), Positives = 183/379 (48%), Gaps = 36/379 (9%)
Query: 60 MVVKLVGAFNELTERMNVLSSSSS-RLLFKALKLSIPMLQSLPLSPDSRSP-LTKALSVA 117
M + L NEL ER+ +S L+ KA + + S +S P + L VA
Sbjct: 1 MNLDLSDKLNELIERVKKYASEEDINLIKKAFEFAQKHHDGQ--SRNSGEPYIVHPLEVA 58
Query: 118 LLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQV 177
L+LADL++D I AGLL VVE S++ V G A L+ ++ L+
Sbjct: 59 LILADLELDIASIVAGLLHDVVEDTSASLEDVEREFGKEIAELVDGVTKLGK---LEFTS 115
Query: 178 LDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLA 236
+ A RK + DIR +++ LA RL MR L YLP +Q + E + I+APLA
Sbjct: 116 KLERQAENYRKMLIAMAKDIRVILIKLADRLHNMRTLKYLPPEKQRQKAQETIDIYAPLA 175
Query: 237 HAVATNYLSFELEDLSFRYLFPFSYL-FVDTWLRS---HETGSKPLIDIYKEQLLQCLKT 292
H + + + +ELEDLS RYL P Y V+ + E K +I + E+L +
Sbjct: 176 HRLGISKIKWELEDLSLRYLDPEGYYDLVEKIAKKRVEREEYIKKIISLISEKLKEA--- 232
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+E + GR K YS +K+ + G+ EE+ D+ +R+I+ +
Sbjct: 233 ------NIEVGQIDGRPKHFYSIYRKMKEQGKTLEEIYDLFAIRIIVNSVKD-------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II +L+K MP R KDYIA PK N Y+SLH V + G+ E+QIRT
Sbjct: 279 ---CYGVLGIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPEGEP---FEVQIRTF 331
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M A G A+H YK G
Sbjct: 332 DMHRTAEYGIAAHWKYKEG 350
>gi|421532508|ref|ZP_15978869.1| GTP pyrophosphokinase [Streptococcus agalactiae STIR-CD-17]
gi|403642300|gb|EJZ03157.1| GTP pyrophosphokinase [Streptococcus agalactiae STIR-CD-17]
Length = 738
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/322 (31%), Positives = 168/322 (52%), Gaps = 26/322 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL +DA ++ G L VVE +++ ++ G ++ ++ +
Sbjct: 55 IQVAGILADLHLDAVTVACGFLHDVVEDTEITLDEIETDFGKDVRDIIDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E M+I+
Sbjct: 112 EYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELEDLSFRYL + + + + L+DI +++ +
Sbjct: 172 APLAHRLGISRIKWELEDLSFRYLNETEFYKISHMMSEKRREREELVDIIVDKIRSYTEE 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
D + GR K YS +K+ + +++ D++ +R I++ +S++
Sbjct: 232 QGLYGD------IYGRPKHIYSIYRKMRDKKKRFDQIYDLIAIRCIMETASDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQIRT+
Sbjct: 279 ----YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQIRTK 329
Query: 413 EMDMLAVNGTASHAFYKGGLTN 434
EM +A G A+H YK G+TN
Sbjct: 330 EMHQVAEFGVAAHWAYKKGITN 351
>gi|18310920|ref|NP_562854.1| GTP pyrophosphokinase [Clostridium perfringens str. 13]
gi|18145602|dbj|BAB81644.1| GTP pyrophosphokinase [Clostridium perfringens str. 13]
Length = 726
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 171/328 (52%), Gaps = 25/328 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T +SVA++LAD+ MD I AGLL V+E + + + + + A+L+ ++
Sbjct: 44 ITHPISVAMILADMGMDTNTIVAGLLHDVIEDTDYTYEDISNIFNVEVANLVDGVTKLGK 103
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+K + +++ A +RK L DIR +I+ LA RL MR L Y+ +Q + E
Sbjct: 104 ---IKYKSKEEQQADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKYMKPEKQKKKAQET 160
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I APLAH + + + +ELEDL RY+ P Y + + + I ++++
Sbjct: 161 LDIFAPLAHRLGISKIKWELEDLCLRYIHPEEYYDLVNMIAEKRVEREKFIS----RIIK 216
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
LK + A++ D ++GR K YS +K++ + E++ D+ +R+ LVNT
Sbjct: 217 ELKENLDKANI--DSDIEGRPKHFYSIYRKMVNKHKSIEQIFDLTAIRI-------LVNT 267
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
+ CY I+ +++K +P R KDYIA PK N Y+SLH V + GKT EIQ
Sbjct: 268 V----KDCYAVLGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTV-IGSEGKT---FEIQ 319
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPE 436
IRT EM A G A+H YK G+ +
Sbjct: 320 IRTFEMHRTAEYGIAAHWKYKSGINGTD 347
>gi|340357216|ref|ZP_08679839.1| GTP diphosphokinase [Sporosarcina newyorkensis 2681]
gi|339618078|gb|EGQ22679.1| GTP diphosphokinase [Sporosarcina newyorkensis 2681]
Length = 732
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 195/402 (48%), Gaps = 38/402 (9%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +LA+LQMD E ++AG L VVE VS + + G A L+ ++
Sbjct: 51 INHPIQVAGILAELQMDPETVAAGFLHDVVEDTEVSREDIIREFGDEVAMLVDGVTKLDK 110
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
LK + +++ A RK F DIR +++ LA RL MR L ++P +Q +S E
Sbjct: 111 ---LKFKSNEEKQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHVPAAKQRRVSEET 167
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I +PLAH + + + +ELED++ RY P Y + ++ + + EQ+
Sbjct: 168 LEIFSPLAHRLGISTIKWELEDIALRYSNPQQYYRIVNLMKQKRVEREKYLQDVMEQMRV 227
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L +++ GR K YS +K++ + E+ D+L +R+++K +
Sbjct: 228 ELDNMGIASEM------HGRPKHLYSIYQKMVIQKKEFNEIYDLLAVRIVVKSIKD---- 277
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY II +LWK MP R KDYIA PK N Y+SLH V G +E+Q
Sbjct: 278 -------CYAALGIIHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV----VGPAGDPLEVQ 326
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGF- 467
IRTEEM ++ G A+H YK G + + + + + + E+ ++ + S+N + F
Sbjct: 327 IRTEEMHRISEFGVAAHWAYKEGKSVAKSSNDIDSKLTWFREILEIQNE---SSNAQEFM 383
Query: 468 ---EFDWRDRVFRLLDKNGD------GRISIEELMEVMEELG 500
+FD + + NGD G + I+ V E+G
Sbjct: 384 ESLKFDLFSDMVYVFTPNGDVVELPQGSVPIDFAYRVHSEVG 425
>gi|169343681|ref|ZP_02864680.1| GTP pyrophosphokinase [Clostridium perfringens C str. JGS1495]
gi|169298241|gb|EDS80331.1| GTP pyrophosphokinase [Clostridium perfringens C str. JGS1495]
Length = 726
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 171/328 (52%), Gaps = 25/328 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T +SVA++LAD+ MD I AGLL V+E + + + + + A+L+ ++
Sbjct: 44 ITHPISVAMILADMGMDTNTIVAGLLHDVIEDTDYTYEDISNIFNVEVANLVDGVTKLGK 103
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+K + +++ A +RK L DIR +I+ LA RL MR L Y+ +Q + E
Sbjct: 104 ---IKYKSKEEQQADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKYMKPEKQKKKAQET 160
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I APLAH + + + +ELEDL RY+ P Y + + + I ++++
Sbjct: 161 LDIFAPLAHRLGISKIKWELEDLCLRYIHPEEYYDLVNMIAEKRVEREKFIS----RIIK 216
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
LK + A++ D ++GR K YS +K++ + E++ D+ +R+ LVNT
Sbjct: 217 ELKENLDKANI--DSDIEGRPKHFYSIYRKMVNKHKSIEQIFDLTAIRI-------LVNT 267
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
+ CY I+ +++K +P R KDYIA PK N Y+SLH V + GKT EIQ
Sbjct: 268 V----KDCYAVLGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTV-IGSEGKT---FEIQ 319
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPE 436
IRT EM A G A+H YK G+ +
Sbjct: 320 IRTFEMHRTAEYGIAAHWKYKSGINGTD 347
>gi|82751232|ref|YP_416973.1| GTP pyrophosphokinase [Staphylococcus aureus RF122]
gi|82656763|emb|CAI81192.1| GTP pyrophosphokinase [Staphylococcus aureus RF122]
Length = 736
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V++ A ++ ++K +
Sbjct: 62 IQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKEMFNEEVARIVDGVTKLKK---V 118
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 119 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIY 178
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I E + ++T
Sbjct: 179 APLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYI----ETAIDRIRT 234
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ D++ GR K YS +K++K + +++ D+L +RVI+ N +N
Sbjct: 235 EMDRMNIEGDIN--GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV----NSIND---- 284
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 285 ---CYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV-VGPNGD--PL-EIQIRTY 337
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A +G A+H YK G
Sbjct: 338 DMHEIAEHGVAAHWAYKEG 356
>gi|332527999|ref|ZP_08404033.1| GTP diphosphokinase [Rubrivivax benzoatilyticus JA2]
gi|332112573|gb|EGJ12366.1| GTP diphosphokinase [Rubrivivax benzoatilyticus JA2]
Length = 761
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/390 (29%), Positives = 196/390 (50%), Gaps = 43/390 (11%)
Query: 67 AFNELTERMNVLSSSSSRLLFKALKLSIPM------LQSLPLSPDSRSPLTKALSVALLL 120
+F LTE++ LS +L+ +A K + LP +T L+VA L
Sbjct: 34 SFAGLTEKLGYLSKGDIKLVREAYKFADEAHLGQFRASGLPY-------ITHPLAVAGLC 86
Query: 121 ADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDD 180
AD ++D + + A LL +E GV+ ++ +R G TA L+ ++ L+ ++
Sbjct: 87 ADWRLDVQAVMAALLHDTIEDQGVTKTELIERFGAPTADLVDGLTKLDK---LQFSTREE 143
Query: 181 ETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAV 239
A + RK L D+R +++ LA RL MR ++ + ++ I+ E ++I+AP+AH +
Sbjct: 144 SQAESFRKMLLAMARDVRVILVKLADRLHNMRTMESMAANKRSRIARETLEIYAPIAHRL 203
Query: 240 ATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADL 299
N EL++LSF+YL P+ + + ++ Y+ +++ ++ D A
Sbjct: 204 GLNQTYRELQELSFQYLHPWRHGALAKAIKRARG--------YRRDIVERVQRDVERAFG 255
Query: 300 VE--DVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACY 357
+ V V GR K+ +S +K+ + +VND+ G R+++ CY
Sbjct: 256 AQKMKVEVTGREKTVFSIYRKMREKHAGFAQVNDIFGFRIVVATLPE-----------CY 304
Query: 358 TTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDML 417
++ L+K +P R KDYIA PKANGY+SLH + VS G +E Q+RT+EM +
Sbjct: 305 LAIGVLHQLYKPVPGRFKDYIAIPKANGYQSLHTTL-VSPLGTA---VEFQVRTDEMHAV 360
Query: 418 AVNGTASHAFYK-GGLTNPEEAKRLKAIML 446
A G A+H YK G + +EA+RL A+ L
Sbjct: 361 AERGIAAHWIYKTSGKGDSQEAQRLGALWL 390
>gi|182624408|ref|ZP_02952192.1| GTP pyrophosphokinase [Clostridium perfringens D str. JGS1721]
gi|177910411|gb|EDT72788.1| GTP pyrophosphokinase [Clostridium perfringens D str. JGS1721]
Length = 726
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 170/324 (52%), Gaps = 25/324 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+SVA++LAD+ MD I AGLL V+E + + + + + A+L+ ++ +
Sbjct: 48 ISVAMILADMGMDTNTIVAGLLHDVIEDTDYTYEDISNIFNVEVANLVDGVTKLGK---I 104
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A +RK L DIR +I+ LA RL MR L Y+ +Q + E + I
Sbjct: 105 KYKSKEEQQADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKYMKPEKQKKKAQETLDIF 164
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELEDL RY+ P Y + + + I ++++ LK
Sbjct: 165 APLAHRLGISKIKWELEDLCLRYIHPEEYYDLVNMIAEKRVEREKFIS----RIIEELKE 220
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ A++ D ++GR K YS +K++ + E++ D+ +R+ LVNT
Sbjct: 221 NLDKANI--DSDIEGRPKHFYSIYRKMVNKHKSIEQIFDLTAIRI-------LVNTV--- 268
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY I+ +++K +P R KDYIA PK N Y+SLH V + GKT EIQIRT
Sbjct: 269 -KDCYAVLGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTV-IGSEGKT---FEIQIRTF 323
Query: 413 EMDMLAVNGTASHAFYKGGLTNPE 436
EM A G A+H YK G+T +
Sbjct: 324 EMHRTAEYGIAAHWKYKSGVTGTD 347
>gi|168204879|ref|ZP_02630884.1| GTP pyrophosphokinase [Clostridium perfringens E str. JGS1987]
gi|422346604|ref|ZP_16427518.1| RelA/SpoT family protein [Clostridium perfringens WAL-14572]
gi|422874854|ref|ZP_16921339.1| GTP pyrophosphokinase [Clostridium perfringens F262]
gi|170663656|gb|EDT16339.1| GTP pyrophosphokinase [Clostridium perfringens E str. JGS1987]
gi|373226149|gb|EHP48476.1| RelA/SpoT family protein [Clostridium perfringens WAL-14572]
gi|380304188|gb|EIA16478.1| GTP pyrophosphokinase [Clostridium perfringens F262]
Length = 726
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 170/324 (52%), Gaps = 25/324 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+SVA++LAD+ MD I AGLL V+E + + + + + A+L+ ++ +
Sbjct: 48 ISVAMILADMGMDTNTIVAGLLHDVIEDTDYTYEDISNIFNVEVANLVDGVTKLGK---I 104
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A +RK L DIR +I+ LA RL MR L Y+ +Q + E + I
Sbjct: 105 KYKSKEEQQADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKYMKPEKQKKKAQETLDIF 164
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELEDL RY+ P Y + + + I ++++ LK
Sbjct: 165 APLAHRLGISKIKWELEDLCLRYIHPEEYYDLVNMIAEKRVEREKFIS----RIIEELKE 220
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ A++ D ++GR K YS +K++ + E++ D+ +R+ LVNT
Sbjct: 221 NLDKANI--DSDIEGRPKHFYSIYRKMVNKHKSIEQIFDLTAIRI-------LVNTV--- 268
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY I+ +++K +P R KDYIA PK N Y+SLH V + GKT EIQIRT
Sbjct: 269 -KDCYAVLGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTV-IGSEGKT---FEIQIRTF 323
Query: 413 EMDMLAVNGTASHAFYKGGLTNPE 436
EM A G A+H YK G+T +
Sbjct: 324 EMHRTAEYGIAAHWKYKSGVTGTD 347
>gi|379795989|ref|YP_005325987.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
MSHR1132]
gi|356872979|emb|CCE59318.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
MSHR1132]
Length = 736
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V++ A ++ ++K +
Sbjct: 62 IQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKEMFNEEVARIVDGVTKLKK---V 118
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 119 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIY 178
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I E + ++T
Sbjct: 179 APLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYI----ETAIDRIRT 234
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ D++ GR K YS +K++K + +++ D+L +RVI+ N +N
Sbjct: 235 EMDRMNIEGDIN--GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV----NSIND---- 284
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 285 ---CYAILGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTV-VGPNGD--PL-EIQIRTF 337
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A +G A+H YK G
Sbjct: 338 DMHEIAEHGVAAHWAYKEG 356
>gi|168208638|ref|ZP_02634263.1| GTP pyrophosphokinase [Clostridium perfringens B str. ATCC 3626]
gi|170712986|gb|EDT25168.1| GTP pyrophosphokinase [Clostridium perfringens B str. ATCC 3626]
Length = 726
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 170/324 (52%), Gaps = 25/324 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+SVA++LAD+ MD I AGLL V+E + + + + + A+L+ ++ +
Sbjct: 48 ISVAMILADMGMDTNTIVAGLLHDVIEDTDYTYEDISNIFNVEVANLVDGVTKLGK---I 104
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A +RK L DIR +I+ LA RL MR L Y+ +Q + E + I
Sbjct: 105 KYKSKEEQQADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKYMKPEKQKKKAQETLDIF 164
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELEDL RY+ P Y + + + I ++++ LK
Sbjct: 165 APLAHRLGISKIKWELEDLCLRYIHPEEYYDLVNMIAEKRVEREKFIS----RIIEELKE 220
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ A++ D ++GR K YS +K++ + E++ D+ +R+ LVNT
Sbjct: 221 NLDKANI--DSDIEGRPKHFYSIYRKMVNKHKSIEQIFDLTAIRI-------LVNTV--- 268
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY I+ +++K +P R KDYIA PK N Y+SLH V + GKT EIQIRT
Sbjct: 269 -KDCYAVLGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTV-IGSEGKT---FEIQIRTF 323
Query: 413 EMDMLAVNGTASHAFYKGGLTNPE 436
EM A G A+H YK G+T +
Sbjct: 324 EMHRTAEYGIAAHWKYKSGVTGTD 347
>gi|110802270|ref|YP_699214.1| GTP pyrophosphokinase [Clostridium perfringens SM101]
gi|110682771|gb|ABG86141.1| GTP pyrophosphokinase [Clostridium perfringens SM101]
Length = 726
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 171/328 (52%), Gaps = 25/328 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T +SVA++LAD+ MD I AGLL V+E + + + + + A+L+ ++
Sbjct: 44 ITHPISVAMILADMGMDTNTIVAGLLHDVIEDTDYTYEDISNIFNVEVANLVDGVTKLGK 103
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+K + +++ A +RK L DIR +I+ LA RL MR L Y+ +Q + E
Sbjct: 104 ---IKYKSKEEQQADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKYMKPEKQKKKAQET 160
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I APLAH + + + +ELEDL RY+ P Y + + + I ++++
Sbjct: 161 LDIFAPLAHRLGISKIKWELEDLCLRYIHPEEYYDLVNMIAEKRVEREKFIS----RIIK 216
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
LK + A++ D ++GR K YS +K++ + E++ D+ +R+ LVNT
Sbjct: 217 ELKENLDKANI--DSDIEGRPKHFYSIYRKMVNKHKSIEQIFDLTAIRI-------LVNT 267
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
+ CY I+ +++K +P R KDYIA PK N Y+SLH V + GKT EIQ
Sbjct: 268 V----KDCYAVLGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTV-IGSEGKT---FEIQ 319
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPE 436
IRT EM A G A+H YK G+ +
Sbjct: 320 IRTFEMHRTAEYGIAAHWKYKSGINGTD 347
>gi|253574925|ref|ZP_04852265.1| RelA/SpoT family protein [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251845971|gb|EES73979.1| RelA/SpoT family protein [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 725
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 164/319 (51%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA ++ ++QMDA + A LL VVE VS++++++ G A L+ +++ +
Sbjct: 49 LAVADIVVNMQMDALSVIAALLHDVVEDTTVSLKEIQEHFGSDCALLVDGLTKLER---I 105
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K Q +++ RK F DIR +++ LA RL MR L Y Q I+ E ++I
Sbjct: 106 KFQSKEEQQNENYRKMFIAMAQDIRVIVIKLADRLHNMRTLKYQSEESQRRIAYETLEIF 165
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
P+A+ + + + +E+ED++ RYL P Y + +R + I ++ + L
Sbjct: 166 CPIANRLGISAIKWEMEDIALRYLNPQQYYRIANLMRKKRAEREEYIKNVIARIAEKLDE 225
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
ADL GR K YS KK+ + E+ D+L +R+I+ N+
Sbjct: 226 MGIQADL------SGRPKHIYSVYKKMTMKNKQFNEIYDLLAIRIIV---DNI------- 269
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY T II +LWK MP R KDYIA PKAN Y+SLH V V NG+ E+QIRT
Sbjct: 270 -KDCYATLGIIHTLWKPMPGRFKDYIAMPKANMYQSLHTTV-VGPNGEP---TEVQIRTW 324
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM A G A+H YK G
Sbjct: 325 EMHRTAEYGIAAHWAYKEG 343
>gi|373857672|ref|ZP_09600413.1| RelA/SpoT family protein [Bacillus sp. 1NLA3E]
gi|372452804|gb|EHP26274.1| RelA/SpoT family protein [Bacillus sp. 1NLA3E]
Length = 731
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 164/320 (51%), Gaps = 27/320 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL+MD E ++AG L VVE V+++ ++ A L+ ++ +
Sbjct: 55 IQVAGILADLEMDPETVAAGFLHDVVEDTSVTLEDIKTAFNDEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP +Q IS E ++I
Sbjct: 112 KYKSHEEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPFEKQRRISNETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYL-FVDTWLRSHETGSKPLIDIYKEQLLQCLK 291
APLAH + + + +ELED + RYL P Y V+ + + L+D+ +E
Sbjct: 172 APLAHRLGISKVKWELEDTALRYLNPQQYYRIVNLMKKKRAEREQYLVDVIEE------- 224
Query: 292 TDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEV 351
A + ++ + GR K YS +K+ + E+ D+L +R+I+ +
Sbjct: 225 VRARMGEVSIKAELSGRPKHIYSIYRKMALQNKQFNEIYDLLAVRIIVNSIKD------- 277
Query: 352 GERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRT 411
CY II + WK MP R KDYIA PK N Y+SLH V + G PL E+QIRT
Sbjct: 278 ----CYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGD--PL-EVQIRT 329
Query: 412 EEMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 330 SEMHEIAEFGIAAHWAYKEG 349
>gi|417860536|ref|ZP_12505592.1| RelA [Agrobacterium tumefaciens F2]
gi|338823600|gb|EGP57568.1| RelA [Agrobacterium tumefaciens F2]
Length = 754
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 167/325 (51%), Gaps = 28/325 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ L VA +L ++ +D I+ LL +E + ++ + G L+ ++K
Sbjct: 56 ISHPLEVAAILTEMHLDESTIAVALLHDTIEDTTATRAEIDELFGEDIGRLVEGLTKLKK 115
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L L + A LRK L D +R L++ LA RL MR ++Y+P ++ IS E
Sbjct: 116 ---LDLVTRKAKQAENLRKLLLAISDDVRVLLVKLADRLHNMRTMEYMPADKRSRISEET 172
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLA + + ELEDLSFRYL P +Y V L+ ET ++ LI +++L +
Sbjct: 173 MEIYAPLAGRMGMQDMRDELEDLSFRYLNPEAYETVTNRLQELETRNEGLIKKIEDELRE 232
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIK--PSSNLV 346
L + + +V+GR K YS +K+ E+++DV G R+++ PS
Sbjct: 233 LLVANGLIG-----ANVKGRQKKPYSVFRKMQSKSLSFEQLSDVYGFRILVDDIPS---- 283
Query: 347 NTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLME 406
CY I+ + W+ +P R KDYI+ PK N YRS+H + G +R +E
Sbjct: 284 ---------CYRALGIVHTRWRVVPGRFKDYISTPKQNDYRSIHTTI----VGPSRQRIE 330
Query: 407 IQIRTEEMDMLAVNGTASHAFYKGG 431
+QIRT+ M +A G A+HA YK G
Sbjct: 331 LQIRTKRMHEIAEFGIAAHALYKDG 355
>gi|220904804|ref|YP_002480116.1| (p)ppGpp synthetase I SpoT/RelA [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219869103|gb|ACL49438.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 719
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 167/329 (50%), Gaps = 41/329 (12%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L+ L+VA LA++ D + AGLL VE +++++ + G A ++ ++
Sbjct: 46 LSHPLAVADTLAEMGFDESTVVAGLLHDTVEDTKATLEELDENFGEDVADIVDGVTKISM 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + ++ A +RK L +D+R L++ LA RL MR LD+ ++Q I+ E
Sbjct: 106 ---IPFENKEEAQAENIRKMILAMSHDMRVLMVKLADRLHNMRTLDFQKAHKQKGIAQET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M I+APLA+ + + LEDLSF+YL P + +D WL H+ K +I
Sbjct: 163 MDIYAPLANRLGLYIMKRNLEDLSFKYLRPDIFNQIDHWLDKHQVVEKQII--------- 213
Query: 289 CLKTDATLADLVEDV--------SVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIK 340
A + DL++D+ V GR K +YS KK+ +E++D++ RV++K
Sbjct: 214 -----AKVVDLIKDLLASNGIEGQVYGRIKHKYSIYKKMQSQSLTLDEMHDIMAFRVLVK 268
Query: 341 PSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGK 400
R CY ++ S W+ + R KDYI+ PK NGY+SLH V + G+
Sbjct: 269 DI-----------RDCYAALGLVHSQWRPVHGRFKDYISMPKTNGYQSLHTTV-IGPEGE 316
Query: 401 TRPLMEIQIRTEEMDMLAVNGTASHAFYK 429
+EIQIRTE+M A +G A+H YK
Sbjct: 317 R---IEIQIRTEDMHRQAEHGVAAHWLYK 342
>gi|229918416|ref|YP_002887062.1| (p)ppGpp synthetase I SpoT/RelA [Exiguobacterium sp. AT1b]
gi|229469845|gb|ACQ71617.1| (p)ppGpp synthetase I, SpoT/RelA [Exiguobacterium sp. AT1b]
Length = 729
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 164/319 (51%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L D+ +DA I LL VVE +S+QQ+ D G A L+ ++ +
Sbjct: 55 VQVAGILVDIGLDATTIIGALLHDVVEDTDISLQQLTDDFGPDVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +E A RK + D+R +++ LA RL MR L ++P+ +Q+ + E ++I
Sbjct: 112 KYKSKKEELAENHRKMIIAMAEDVRVILIKLADRLHNMRTLQHMPKEKQVQKAEETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED+S RY+ P Y + + ++ T + L+ +
Sbjct: 172 APLAHRMGISTIKWELEDISLRYINPQQYYKIVSMMKQKRTEREALVTSV------ITEV 225
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ L ++ D V GR K YS K++K + E+ D++ +R+I+
Sbjct: 226 NGVLEEVHIDADVNGRPKHIYSIYNKMVKHKKEFNEIYDLMAVRIIVDSI---------- 275
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
R CY II + +K MP R KDYIA PK N Y+SLH V K PL E+QIRT+
Sbjct: 276 -RDCYAVLGIIHTQYKPMPGRFKDYIAMPKPNMYQSLHTTV---IGPKGEPL-EVQIRTK 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A G A+H YK G
Sbjct: 331 DMHFIAEFGIAAHWAYKEG 349
>gi|408787767|ref|ZP_11199494.1| GTP pyrophosphohydrolase/synthetase [Rhizobium lupini HPC(L)]
gi|424909913|ref|ZP_18333290.1| (p)ppGpp synthetase, RelA/SpoT family [Rhizobium leguminosarum bv.
viciae USDA 2370]
gi|392845944|gb|EJA98466.1| (p)ppGpp synthetase, RelA/SpoT family [Rhizobium leguminosarum bv.
viciae USDA 2370]
gi|408486388|gb|EKJ94715.1| GTP pyrophosphohydrolase/synthetase [Rhizobium lupini HPC(L)]
Length = 744
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 166/325 (51%), Gaps = 28/325 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ L VA +L ++ +D I+ LL +E + ++ + G L+ ++K
Sbjct: 46 ISHPLEVAAILTEMHLDESTIAVALLHDTIEDTTATRAEIDELFGEDIGRLVEGLTKLKK 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L L + A LRK L D +R L++ LA RL MR ++Y+P ++ IS E
Sbjct: 106 ---LDLVTRKAKQAENLRKLLLAISDDVRVLLVKLADRLHNMRTMEYMPADKRSRISEET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLA + + ELEDLSFRYL P +Y V L+ ET ++ LI +++L +
Sbjct: 163 MEIYAPLAGRMGMQDMRDELEDLSFRYLNPEAYETVTNRLQELETRNEGLIKKIEDELRE 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIK--PSSNLV 346
L + + V+GR K YS +K+ E+++DV G R+++ PS
Sbjct: 223 LLVANGLIG-----AGVKGRQKKPYSVFRKMQSKSLSFEQLSDVYGFRILVDDIPS---- 273
Query: 347 NTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLME 406
CY I+ + W+ +P R KDYI+ PK N YRS+H + G +R +E
Sbjct: 274 ---------CYRALGIVHTRWRVVPGRFKDYISTPKQNDYRSIHTTI----VGPSRQRIE 320
Query: 407 IQIRTEEMDMLAVNGTASHAFYKGG 431
+QIRT+ M +A G A+HA YK G
Sbjct: 321 LQIRTKRMHEIAEFGIAAHALYKDG 345
>gi|393200222|ref|YP_006462064.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Solibacillus silvestris StLB046]
gi|406667432|ref|ZP_11075190.1| GTP pyrophosphokinase [Bacillus isronensis B3W22]
gi|327439553|dbj|BAK15918.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Solibacillus silvestris StLB046]
gi|405384800|gb|EKB44241.1| GTP pyrophosphokinase [Bacillus isronensis B3W22]
Length = 731
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 168/329 (51%), Gaps = 25/329 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+LQMD E ++AG L VVE V+ + + + A L+ ++ +
Sbjct: 55 VQVAGILAELQMDPETVAAGFLHDVVEDTEVTREDLVNEFSEEVAKLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K +++ A RK F DIR +++ LA RL MR L +LP +Q IS E ++I
Sbjct: 112 KYMSKEEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPAEKQRRISQETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + + ++ + +D +++ LK
Sbjct: 172 APLAHRLGISKVKWELEDTALRYLNPQQYYRIVSLMKKKRDEREAYLDNVMDEINSQLKE 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
AD+ GR K YS +K++ + E+ D+L +R+++ +
Sbjct: 232 VEIEADIF------GRPKHLYSIYRKMVLQKKQFNEIYDLLAVRILVDSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II +LWK MP R KDYIA PK N Y+SLH V G +E+QIRT+
Sbjct: 278 ---CYAVIGIIHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV----IGPYGDPLEVQIRTK 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRL 441
EM +A G A+H YK G T + A+ +
Sbjct: 331 EMHKIAEFGIAAHWAYKEGKTVEQNAETI 359
>gi|253317214|ref|ZP_04840427.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
Length = 729
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V++ A ++ ++K +
Sbjct: 55 IQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKEMFNEEVARIVDGVTKLKK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 112 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I E + ++T
Sbjct: 172 APLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYI----ETAIDRIRT 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ D++ GR K YS +K++K + +++ D+L +RVI+ N +N
Sbjct: 228 EMDRMNIEGDIN--GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV----NSIND---- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 278 ---CYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV-VGPNGD--PL-EIQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A +G A+H YK G
Sbjct: 331 DMHEIAEHGVAAHWAYKEG 349
>gi|418884672|ref|ZP_13438855.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1769]
gi|377711924|gb|EHT36149.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1769]
Length = 700
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V++ A ++ ++K +
Sbjct: 55 IQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKEMFNEEVARIVDGVTKLKK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 112 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I E + ++T
Sbjct: 172 APLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYI----ETAIDRIRT 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ D++ GR K YS +K++K + +++ D+L +RVI+ N +N
Sbjct: 228 EMDRMNIEGDIN--GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV----NSIND---- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 278 ---CYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV-VGPNGD--PL-EIQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A +G A+H YK G
Sbjct: 331 DMHEIAEHGVAAHWAYKEG 349
>gi|317131341|ref|YP_004090655.1| (p)ppGpp synthetase I SpoT/RelA [Ethanoligenens harbinense YUAN-3]
gi|315469320|gb|ADU25924.1| (p)ppGpp synthetase I, SpoT/RelA [Ethanoligenens harbinense YUAN-3]
Length = 729
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/333 (33%), Positives = 175/333 (52%), Gaps = 29/333 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
++VA +L +L +D + + A LL VVE GV ++ +R + G A L+ +V +
Sbjct: 51 VAVATILVNLGLDTDSLCAALLHDVVEDTGVPLENIRKQFGSDVALLVDGVTKVGRVAHY 110
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ ++ A ++RK L DIR +++ LA RL MR LD + +QL ISL M+++
Sbjct: 111 SRE---EQQAESIRKMLLAMAKDIRVILIKLADRLHNMRTLDAMTSQKQLDISLGTMEVY 167
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+AH + + ELEDLS R+L P +Y ++ L+ + +E +LQ ++
Sbjct: 168 APIAHRLGIRTVKDELEDLSIRHLDPVAYHEIEVALKKRKD--------EREAILQSIQN 219
Query: 293 DAT--LADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSE 350
L L +V ++GR KS Y +K+ GR E++ D+ +RVI+ + VN
Sbjct: 220 RIAERLQSLHMNVHIEGRVKSIYGIYRKVYMKGRAFEQIYDIYAVRVIV----DTVNE-- 273
Query: 351 VGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIR 410
CY +I L K +P R KDYI+ PK N Y+SLH V GK +E+QIR
Sbjct: 274 -----CYNILGVIHDLMKPVPGRFKDYISTPKPNMYQSLHTTV----IGKEGVPIEVQIR 324
Query: 411 TEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKA 443
T +M A G A+H YK G+ + ++ L++
Sbjct: 325 TWDMHHTAEYGIAAHWKYKLGIQSSKDKGSLES 357
>gi|168214142|ref|ZP_02639767.1| GTP pyrophosphokinase [Clostridium perfringens CPE str. F4969]
gi|168215563|ref|ZP_02641188.1| GTP pyrophosphokinase [Clostridium perfringens NCTC 8239]
gi|170714350|gb|EDT26532.1| GTP pyrophosphokinase [Clostridium perfringens CPE str. F4969]
gi|182382330|gb|EDT79809.1| GTP pyrophosphokinase [Clostridium perfringens NCTC 8239]
Length = 726
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 170/324 (52%), Gaps = 25/324 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+SVA++LAD+ MD I AGLL V+E + + + + + A+L+ ++ +
Sbjct: 48 ISVAMILADMGMDTNTIVAGLLHDVIEDTDYTYEDISNIFNVEVANLVDGVTKLGK---I 104
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A +RK L DIR +I+ LA RL MR L Y+ +Q + E + I
Sbjct: 105 KYKSKEEQQADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKYMKPEKQKKKAQETLDIF 164
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELEDL RY+ P Y + + + I ++++ LK
Sbjct: 165 APLAHRLGISKIKWELEDLCLRYIHPEEYYDLVNMIAEKRVEREKFIS----RIIEELKE 220
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ A++ D ++GR K YS +K++ + E++ D+ +R+ LVNT
Sbjct: 221 NLDKANI--DSDIEGRPKHFYSIYRKMVNKHKSIEQIFDLTAIRI-------LVNTV--- 268
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY I+ +++K +P R KDYIA PK N Y+SLH V + GKT EIQIRT
Sbjct: 269 -KDCYAVLGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTV-IGSEGKT---FEIQIRTF 323
Query: 413 EMDMLAVNGTASHAFYKGGLTNPE 436
EM A G A+H YK G+T +
Sbjct: 324 EMHRTAEYGIAAHWKYKSGVTGTD 347
>gi|289578226|ref|YP_003476853.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacter italicus Ab9]
gi|289527939|gb|ADD02291.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter italicus Ab9]
Length = 719
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/335 (33%), Positives = 178/335 (53%), Gaps = 37/335 (11%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + V+ +LADL++D I+AGLL V+E V+ +Q+ ++ G A L+ ++
Sbjct: 45 IVHPIEVSYILADLELDITTIAAGLLHDVIEDTDVTYEQLLEKFGKEIADLVDGVTKL-G 103
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ K +V ++ A +RK + DIR +++ LA RL MR L YLP +Q + E
Sbjct: 104 KIEYKSKV--EQQAENMRKMLIAMAKDIRVILIKLADRLHNMRTLKYLPPDKQKEKAEET 161
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSY--LFVDTWLRSHETGSKPLIDIYKEQL 286
++I+AP+AH + + + +ELEDL RYL P Y L + E +E+L
Sbjct: 162 LEIYAPIAHRLGISKIKWELEDLCLRYLHPDEYYDLVEKVAAKRKE----------REEL 211
Query: 287 LQCLKTDATLADLVEDVSVQ----GRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPS 342
+Q + T T+ + ++++ +Q GR K YS KK+ + +++ D+L +R+I
Sbjct: 212 IQNIIT--TIKEKLKEMGIQAEVDGRPKHFYSIYKKMKTQNKSFDQIYDLLAVRII---- 265
Query: 343 SNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTR 402
VNT + CY I+ +LWK +P R KDYIA PK N Y+SLH V + G+
Sbjct: 266 ---VNTV----KECYGVLGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTV-IGPKGEP- 316
Query: 403 PLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
EIQIRT EM A G A+H YK G T ++
Sbjct: 317 --FEIQIRTWEMHKTAEYGIAAHWKYKEGKTTEDK 349
>gi|323142303|ref|ZP_08077135.1| GTP diphosphokinase [Phascolarctobacterium succinatutens YIT 12067]
gi|322413187|gb|EFY04074.1| GTP diphosphokinase [Phascolarctobacterium succinatutens YIT 12067]
Length = 754
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 116/329 (35%), Positives = 177/329 (53%), Gaps = 43/329 (13%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ V +L LQMD + ++A L VVE + ++++ G A+L+ ++
Sbjct: 64 IGVVSILVGLQMDDKTLAAAFLHDVVEDTDYKLDYIKEQFGTVVANLVDGVTKLG----- 118
Query: 174 KLQVL--DDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMK 230
K++ + +D RK F DIR +++ LA RL MR + Y+P ++Q IS E ++
Sbjct: 119 KIEYISKEDRQIENYRKMFLAMARDIRVVLIKLADRLHNMRTMKYMPVHKQQSISRETLE 178
Query: 231 IHAPLAHAVATNYLSFELEDLSFRYLFPFSY--LFVDTWLRSHETGSKPLIDIYKEQLLQ 288
I+APLAH + + +ELEDL+FRY+ P Y L ++ E +E ++
Sbjct: 179 IYAPLAHRLGIYTIKWELEDLAFRYMEPDIYYDLVEQVKIKRRE----------REDMIN 228
Query: 289 CLKTDATLADLVEDVS----VQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSN 344
T TL D VE +QGR K+ YS KK+L+D + E+ D+L +RV
Sbjct: 229 EAMT--TLKDAVEKAGIRCEIQGRPKNFYSIHKKMLRDHKQLSEIYDLLAIRV------- 279
Query: 345 LVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPL 404
LV+T + CY T I+ S+W+ +P R KDY+A PK+N Y+SLH V +S+ G+ PL
Sbjct: 280 LVDTV----KDCYGTLGIVHSMWRPIPGRFKDYVAVPKSNMYQSLHTTV-LSNGGQ--PL 332
Query: 405 MEIQIRTEEMDMLAVNGTASHAFYK--GG 431
EIQIRT EM ++ G A+H YK GG
Sbjct: 333 -EIQIRTFEMHRISEYGIAAHWRYKESGG 360
>gi|15924624|ref|NP_372158.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus Mu50]
gi|156979952|ref|YP_001442211.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus Mu3]
gi|255006419|ref|ZP_05145020.2| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|14247406|dbj|BAB57796.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus Mu50]
gi|156722087|dbj|BAF78504.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus Mu3]
Length = 729
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V++ A ++ ++K +
Sbjct: 55 IQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKEMFNEEVARIVDGVTKLKK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 112 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I E + ++T
Sbjct: 172 APLAHHLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYI----ETAIDRIRT 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ D++ GR K YS +K++K + +++ D+L +RVI+ N +N
Sbjct: 228 EMDRMNIEGDIN--GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV----NSIND---- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 278 ---CYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV-VGPNGD--PL-EIQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A +G A+H YK G
Sbjct: 331 DMHEIAEHGVAAHWAYKEG 349
>gi|110798612|ref|YP_696617.1| GTP pyrophosphokinase [Clostridium perfringens ATCC 13124]
gi|110673259|gb|ABG82246.1| GTP pyrophosphokinase [Clostridium perfringens ATCC 13124]
Length = 726
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 170/324 (52%), Gaps = 25/324 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+SVA++LAD+ MD I AGLL V+E + + + + + A+L+ ++ +
Sbjct: 48 ISVAMILADMGMDTNTIVAGLLHDVIEDTDYTYEDISNIFNVEVANLVDGVTKLGK---I 104
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A +RK L DIR +I+ LA RL MR L Y+ +Q + E + I
Sbjct: 105 KYKSKEEQQADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKYMKPEKQKKKAQETLDIF 164
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELEDL RY+ P Y + + + I ++++ LK
Sbjct: 165 APLAHRLGISKIKWELEDLCLRYIHPEEYYDLVNMIAEKRVEREKFIS----RIIEELKE 220
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ A++ D ++GR K YS +K++ + E++ D+ +R+ LVNT
Sbjct: 221 NLDKANI--DSDIEGRPKHFYSIYRKMVNKHKSIEQIFDLTAIRI-------LVNTV--- 268
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY I+ +++K +P R KDYIA PK N Y+SLH V + GKT EIQIRT
Sbjct: 269 -KDCYAVLGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTV-IGSEGKT---FEIQIRTF 323
Query: 413 EMDMLAVNGTASHAFYKGGLTNPE 436
EM A G A+H YK G+T +
Sbjct: 324 EMHRTAEYGIAAHWKYKSGVTGTD 347
>gi|417889932|ref|ZP_12534011.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21200]
gi|418282064|ref|ZP_12894853.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21202]
gi|418307492|ref|ZP_12919197.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21194]
gi|418889447|ref|ZP_13443580.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1524]
gi|341855625|gb|EGS96469.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21200]
gi|365171614|gb|EHM62439.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21202]
gi|365245586|gb|EHM86210.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21194]
gi|377752955|gb|EHT76873.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1524]
Length = 729
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V++ A ++ ++K +
Sbjct: 55 IQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKEMFNEEVARIVDGVTKLKK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 112 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I E + ++T
Sbjct: 172 APLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYI----ETAIDRIRT 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ D++ GR K YS +K++K + +++ D+L +RVI+ N +N
Sbjct: 228 EMDRMNIEGDIN--GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV----NSIND---- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 278 ---CYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV-VGPNGD--PL-EIQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A +G A+H YK G
Sbjct: 331 DMHEIAEHGVAAHWAYKEG 349
>gi|373495922|ref|ZP_09586472.1| RelA/SpoT family protein [Fusobacterium sp. 12_1B]
gi|404369252|ref|ZP_10974596.1| RelA/SpoT family protein [Fusobacterium ulcerans ATCC 49185]
gi|313688538|gb|EFS25373.1| RelA/SpoT family protein [Fusobacterium ulcerans ATCC 49185]
gi|371966563|gb|EHO84049.1| RelA/SpoT family protein [Fusobacterium sp. 12_1B]
Length = 726
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 190/366 (51%), Gaps = 32/366 (8%)
Query: 69 NELTERMNVLSSSSSRLLFKALKLSIPMLQSLPLSPDSRSP---LTKALSVALLLADLQM 125
N E +N ++ ++ ++ + +KL++ + +S + + V +L D++M
Sbjct: 2 NYWEEIVNQINKNNLKVDLEKIKLALYFAEECHEGQYRKSGEDYIMHPVEVTKILIDMKM 61
Query: 126 DAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVN-LKLQVLDDETAA 184
D + I AG+L +VE +++ ++ G A L+ ++K+ N K Q DE
Sbjct: 62 DTDTIVAGILHDIVEDTLITLADIKYNFGDTVATLVDGVTKLKSLPNGTKKQ---DEN-- 116
Query: 185 ALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNY 243
+RK L ++R +I+ L+ RL MR L Y+ +Q+ IS E + I+APLAH +
Sbjct: 117 -IRKMILAMAQNLRVIIIKLSDRLHNMRTLKYMKPEKQIAISQETLDIYAPLAHRLGIAK 175
Query: 244 LSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDV 303
+ +ELEDL RYL P Y + + + S ++ + + +++ L +
Sbjct: 176 IKWELEDLCLRYLKPEEYEHIKSLIDSKRNERSEYVESFIKTIVKLLHDTGIKGN----- 230
Query: 304 SVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREII 363
V+GR+K YS KK+ + G+ +++ D++G+R+I+ E CY T +I
Sbjct: 231 -VKGRFKHFYSIYKKMYEKGKEFDDIYDLMGVRIIVDT-----------EGECYNTLGVI 278
Query: 364 QSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTA 423
S ++ +P R KDYIA PK+N Y+S+H + V GK +EIQIRTE+MD +A G A
Sbjct: 279 HSHFRPVPGRFKDYIAVPKSNNYQSIHTTI-VGPLGK---FIEIQIRTEDMDRVAEEGIA 334
Query: 424 SHAFYK 429
+H YK
Sbjct: 335 AHWSYK 340
>gi|168004491|ref|XP_001754945.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694049|gb|EDQ80399.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 573
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/326 (34%), Positives = 167/326 (51%), Gaps = 31/326 (9%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHL------LHE 163
L+ + AL+LA + V++AGLL ++ +S+Q +R +G A L L E
Sbjct: 71 LSHCVETALILAATGVGNTVVAAGLLHDAIDDSNLSLQLLRGALGEDVASLVSGVSKLSE 130
Query: 164 SLRVKNNVNLKLQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLM 223
++ + N V D A +LR L D+R +++ +A RL +R L LP +Q+
Sbjct: 131 FSQLARDSN---TVRDPTEADSLRTMILAMVDVRVVLIKIADRLHNLRTLGALPYLKQIG 187
Query: 224 ISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYK 283
I+ E ++I APLA+ + ELEDL F+ L P + D R E + L+
Sbjct: 188 IANETLEIFAPLANRLGIWSWKAELEDLCFKCLKPVEHQ--DLSARLSERCREGLVMSSI 245
Query: 284 EQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSS 343
L L+ + V+ V + GR K+ YS KK++K R PEE+ DV GLR+I+ +
Sbjct: 246 RDLDDALRNEG-----VQFVDLSGRPKNLYSIYKKMMKKKRTPEEILDVRGLRLIVSDEN 300
Query: 344 NLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRP 403
N CY +I+ LWK++P ++KDYIA K NGY+SLH V SD P
Sbjct: 301 N-----------CYEALQIVHKLWKQVPGKSKDYIAHSKPNGYKSLHTVVIGSDG---YP 346
Query: 404 LMEIQIRTEEMDMLAVNGTASHAFYK 429
L E+QIRT +M A G A+H YK
Sbjct: 347 L-EVQIRTMKMHHQAEYGLAAHWRYK 371
>gi|15927214|ref|NP_374747.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus N315]
gi|21283313|ref|NP_646401.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus MW2]
gi|148268114|ref|YP_001247057.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus JH9]
gi|150394182|ref|YP_001316857.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus JH1]
gi|269203259|ref|YP_003282528.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus ED98]
gi|296275919|ref|ZP_06858426.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus MR1]
gi|387150777|ref|YP_005742341.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Staphylococcus aureus
04-02981]
gi|415692758|ref|ZP_11454678.1| RelA/SpoT family protein [Staphylococcus aureus subsp. aureus
CGS03]
gi|417651056|ref|ZP_12300819.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21172]
gi|417894333|ref|ZP_12538352.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21201]
gi|417897939|ref|ZP_12541865.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21259]
gi|418314427|ref|ZP_12925901.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21334]
gi|418316727|ref|ZP_12928162.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21340]
gi|418567175|ref|ZP_13131540.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21272]
gi|418640299|ref|ZP_13202531.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-3]
gi|418652842|ref|ZP_13214805.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-99]
gi|418661102|ref|ZP_13222704.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-122]
gi|418878550|ref|ZP_13432785.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1165]
gi|418881316|ref|ZP_13435533.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1213]
gi|418886899|ref|ZP_13441046.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1150]
gi|418914735|ref|ZP_13468705.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|418919564|ref|ZP_13473509.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIGC348]
gi|418931938|ref|ZP_13485773.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1750]
gi|418934602|ref|ZP_13488424.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIGC128]
gi|418988698|ref|ZP_13536370.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1835]
gi|418991562|ref|ZP_13539223.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1096]
gi|419784623|ref|ZP_14310386.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-M]
gi|443636047|ref|ZP_21120165.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21236]
gi|13701432|dbj|BAB42726.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus N315]
gi|21204753|dbj|BAB95449.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus MW2]
gi|147741183|gb|ABQ49481.1| (p)ppGpp synthetase I, SpoT/RelA [Staphylococcus aureus subsp.
aureus JH9]
gi|149946634|gb|ABR52570.1| RelA/SpoT family protein [Staphylococcus aureus subsp. aureus JH1]
gi|262075549|gb|ACY11522.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus ED98]
gi|285817316|gb|ADC37803.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Staphylococcus aureus
04-02981]
gi|315129918|gb|EFT85908.1| RelA/SpoT family protein [Staphylococcus aureus subsp. aureus
CGS03]
gi|329727240|gb|EGG63696.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21172]
gi|341849441|gb|EGS90584.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21259]
gi|341852478|gb|EGS93367.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21201]
gi|365233463|gb|EHM74417.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21334]
gi|365240690|gb|EHM81457.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21340]
gi|371982879|gb|EHP00028.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21272]
gi|375014863|gb|EHS08534.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-3]
gi|375021010|gb|EHS14517.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-99]
gi|375039533|gb|EHS32458.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-122]
gi|377694672|gb|EHT19037.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1165]
gi|377713116|gb|EHT37329.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1750]
gi|377717791|gb|EHT41966.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1835]
gi|377723684|gb|EHT47809.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1096]
gi|377724401|gb|EHT48517.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1150]
gi|377731059|gb|EHT55117.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1213]
gi|377755391|gb|EHT79290.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|377767243|gb|EHT91050.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIGC348]
gi|377770696|gb|EHT94457.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIGC128]
gi|383363833|gb|EID41159.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-M]
gi|443408556|gb|ELS67075.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21236]
Length = 729
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V++ A ++ ++K +
Sbjct: 55 IQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKEMFNEEVARIVDGVTKLKK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 112 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I E + ++T
Sbjct: 172 APLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYI----ETAIDRIRT 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ D++ GR K YS +K++K + +++ D+L +RVI+ N +N
Sbjct: 228 EMDRMNIEGDIN--GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV----NSIND---- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 278 ---CYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV-VGPNGD--PL-EIQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A +G A+H YK G
Sbjct: 331 DMHEIAEHGVAAHWAYKEG 349
>gi|449469300|ref|XP_004152359.1| PREDICTED: GTP pyrophosphokinase-like [Cucumis sativus]
Length = 883
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 128/410 (31%), Positives = 205/410 (50%), Gaps = 34/410 (8%)
Query: 66 GAFNELTERMNVLSSSSSRLLFKALKLSIPMLQSLPLSPDSRSP-LTKALSVALLLADLQ 124
G + +L ++ LS L+ ALKL+ S P + + VA +L +L+
Sbjct: 130 GLWEDLKPTISYLSPKELELVHNALKLAFEAHDGQ--KRRSGEPFIIHPVEVARILGELE 187
Query: 125 MDAEVISAGLLRQVVE-SGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQ----VLD 179
+D E I+AGLL VE + V+ +++ + G H++ +V LK + +
Sbjct: 188 LDWETIAAGLLHDTVEDTDFVTFEKIEEEFGATVRHIVEGETKVSKLGKLKCKNECNSVQ 247
Query: 180 DETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHA 238
D A LR+ F ++R +I+ LA RL MR L ++P ++Q I+ E +++ APLA
Sbjct: 248 DVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIARETLQVFAPLAKL 307
Query: 239 VATNYLSFELEDLSFRYLFPFSYLFVDTWL----RSHETGSKPLIDIYKEQLLQCLKTDA 294
+ + ELE+LSF Y P Y V + + HE K LI+ K+ L++ ++ D
Sbjct: 308 LGMYQIKSELENLSFMYTNPEDYSKVKRRVADLSKEHE---KELIEA-KKILMKRIQEDQ 363
Query: 295 TLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG-- 352
L + V+ K YS K +LK EVN + LR+II+P + +VG
Sbjct: 364 FLDLMTMRTDVRSVCKEPYSIYKAVLKSQCSISEVNQIAQLRIIIQPKKGI----DVGPL 419
Query: 353 ---ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQI 409
++ CY ++ +W +P KDYIA PK NGY+SLH V + ++ +E+QI
Sbjct: 420 CSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTV-IPFLYESMFRLEVQI 478
Query: 410 RTEEMDMLAVNGTASHAFYKGGLTNP-------EEAKRLKAIMLAAAELA 452
RTEEMD++A G A+H G +T+P + R KA+ L+ A +A
Sbjct: 479 RTEEMDLIAERGIATHYCGGGLVTSPVRNSMPNSRSSRGKAVCLSDANIA 528
>gi|358466796|ref|ZP_09176585.1| hypothetical protein HMPREF9093_01060 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357068679|gb|EHI78668.1| hypothetical protein HMPREF9093_01060 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 725
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 115/350 (32%), Positives = 181/350 (51%), Gaps = 36/350 (10%)
Query: 87 FKALKLSIPMLQSLPLSPDSRSP---LTKALSVALLLADLQMDAEVISAGLLRQVVESGG 143
F LKL++ + +S + + VA +L D++MD + + AGLL VVE
Sbjct: 21 FNKLKLALAFAEESHKGQYRKSGDDYIVHPVEVAKILMDMKMDTDTVVAGLLHDVVEDTL 80
Query: 144 VSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDET---AAALRKFCLTYY-DIRAL 199
+ I ++ G T +L + + KL+ L + T A +RK L +IR +
Sbjct: 81 IPIADIKYNFG-DTVAILVDGVT-------KLKALPNGTKNQAENIRKMILAMAENIRVI 132
Query: 200 ILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPF 259
++ LA RL MR L ++ +Q IS E + I+APLAH + + ELEDL+F YL
Sbjct: 133 LIKLADRLHNMRTLKFMKPEKQQTISKETLDIYAPLAHRLGMAKIKSELEDLAFSYLHHE 192
Query: 260 SYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKL 319
YL + + + + K Y E ++ +K TL DL V+GR+K YS +K+
Sbjct: 193 EYLEIKKLVENTKEERKD----YIENFIRTMK--RTLVDLGLKAEVKGRFKHFYSIYRKM 246
Query: 320 LKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIA 379
+ G+ +++ D++G+RVI++ + ACY I+ S + +P R KDYIA
Sbjct: 247 YQKGKEFDDIYDLMGVRVIVEDKA-----------ACYHVLGIVHSQYTPVPGRFKDYIA 295
Query: 380 RPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYK 429
PK+N Y+S+H + V GK +EIQIRT++MD +A G A+H YK
Sbjct: 296 VPKSNNYQSIHTTI-VGPLGK---FIEIQIRTKDMDDIAEEGIAAHWNYK 341
>gi|418895396|ref|ZP_13449491.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1057]
gi|377695202|gb|EHT19566.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1057]
Length = 729
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V++ A ++ ++K +
Sbjct: 55 IQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKEMFNEEVARIVDGVTKLKK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 112 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I E + ++T
Sbjct: 172 APLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYI----ETAIDRIRT 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ D++ GR K YS +K++K + +++ D+L +RVI+ N +N
Sbjct: 228 EMDRMNIEGDIN--GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV----NSIND---- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 278 ---CYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV-VGPNGD--PL-EIQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A +G A+H YK G
Sbjct: 331 DMHEIAEHGVAAHWAYKEG 349
>gi|373465559|ref|ZP_09557016.1| GTP diphosphokinase [Lactobacillus kisonensis F0435]
gi|371760145|gb|EHO48845.1| GTP diphosphokinase [Lactobacillus kisonensis F0435]
Length = 748
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/324 (34%), Positives = 166/324 (51%), Gaps = 25/324 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T + VA +LADL MD E +SAG L VVE G + +R+ G A ++ ++
Sbjct: 57 ITHPIQVAGILADLHMDPETVSAGFLHDVVEDTGAVLGDIRELFGDDVALIVDGVTKLSK 116
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+K + + A RK L DIR +I+ LA RL MR L L +Q I+ E
Sbjct: 117 ---IKYKSSQERLAENHRKLLLAMCKDIRVMIVKLADRLHNMRTLKSLRPDKQRRIAKET 173
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A + + +ELED+S RYL P Y + + S +D K+ + +
Sbjct: 174 LEIYAPIADRLGIGTIKWELEDISLRYLNPQQYYRIVHLMNSRRDQR---VDYIKKAISE 230
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ ++DL + GR K YS +K+++ + ++ D+L +RVI+ +
Sbjct: 231 V---KSAISDLDIKSEIYGRPKHIYSVYRKMVEKHKQFSQIYDLLAIRVIVGSIKD---- 283
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY I S WK MP R KDYIA PKAN Y+SLH V + GK PL E+Q
Sbjct: 284 -------CYAVLGAIHSKWKPMPGRFKDYIAMPKANMYQSLHTTV-IGPEGK--PL-EVQ 332
Query: 409 IRTEEMDMLAVNGTASHAFYKGGL 432
IRTEEM +A G A+H YK G+
Sbjct: 333 IRTEEMHRVAEFGIAAHWAYKEGI 356
>gi|379014840|ref|YP_005291076.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VC40]
gi|374363537|gb|AEZ37642.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VC40]
Length = 729
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V++ A ++ ++K +
Sbjct: 55 IQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKEMFNEEVARIVDGVTKLKK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 112 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I E + ++T
Sbjct: 172 APLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYI----ETAIDRIRT 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ D++ GR K YS +K++K + +++ D+L +RVI+ N +N
Sbjct: 228 EMDRMNIEGDIN--GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV----NSIND---- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 278 ---CYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV-VGPNGD--PL-EIQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A +G A+H YK G
Sbjct: 331 DMHEIAEHGVAAHWAYKEG 349
>gi|308070363|ref|YP_003871968.1| GTP pyrophosphokinase [Paenibacillus polymyxa E681]
gi|305859642|gb|ADM71430.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)
[Paenibacillus polymyxa E681]
Length = 725
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 164/319 (51%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA ++ ++QMD I A LL VVE VS+ Q+R+ G A L+ +++ +
Sbjct: 49 LAVADIVVNMQMDTISIIAALLHDVVEDTTVSLAQIREHFGDTCAMLVDGLTKLER---I 105
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ RK F DIR +++ LA RL MR L Y Q I+ E ++I
Sbjct: 106 QFRSKEEQQNENYRKMFIAMAQDIRVIVIKLADRLHNMRTLKYQSEESQRRIAYETLEIF 165
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
P+A+ + + + +E+ED++ RYL P Y + + + ID +++ + L+
Sbjct: 166 CPVANRLGISAIKWEMEDIALRYLNPQQYYRIANLMHKKRAEREQFIDNVIQRIREKLEE 225
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
ADL GR K YS KK+ + E+ D+L +R+I+ N+
Sbjct: 226 MGIQADL------SGRPKHIYSVFKKMTTKNKQFNEIYDLLAIRIIV---DNI------- 269
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY T II +LWK MP R KDYIA PKAN Y+SLH V V NG+ E+QIRT
Sbjct: 270 -KDCYATLGIIHTLWKPMPGRFKDYIAMPKANMYQSLHTTV-VGPNGEP---TEVQIRTV 324
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M A G A+H YK G
Sbjct: 325 DMHRTAEFGIAAHWAYKEG 343
>gi|371777103|ref|ZP_09483425.1| (p)ppGpp synthetase I, SpoT/RelA [Anaerophaga sp. HS1]
Length = 744
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 116/334 (34%), Positives = 185/334 (55%), Gaps = 35/334 (10%)
Query: 114 LSVALLLAD-LQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVN 172
LSVA ++A+ + + ++ ++A LL VVE +I + G A ++ + L
Sbjct: 63 LSVARIVAEEIGLGSKGVAAALLHDVVEDSEYTIDDIESIFGEKVAGIV-DGL------- 114
Query: 173 LKLQVLDDET----AAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLE 227
KL+ + D+T A RK LT DIR +++ LA RL MR LD +P +++L I+ E
Sbjct: 115 TKLEGVVDQTRSKQAENFRKLLLTMVEDIRVILIKLADRLHNMRTLDSMPEHKRLKIAGE 174
Query: 228 VMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLL 287
+ ++APLAH + + ELEDL+F+Y P + + L ++ +K LI + ++
Sbjct: 175 TLYLYAPLAHRLGLYSIKSELEDLAFKYEHPKIFQEISAKLEDYQVRTKSLITQFSLPII 234
Query: 288 QCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIP-EEVNDVLGLRVIIKPSSNLV 346
+ L + D ++GR KS YS +K+ K +IP EEV D+L +R++ KP
Sbjct: 235 ERLSNEGYEFD------IKGRPKSIYSIWQKMQKK-QIPFEEVYDLLAIRIVFKPK---- 283
Query: 347 NTSEVGERA-CYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLM 405
E+ E+A C+T +I ++K P R +D+++ PKANGY +LH V + GK +
Sbjct: 284 --PEIPEKAQCWTIYSLITDIYKPKPDRLRDWVSTPKANGYEALHATV-MGPEGK---WI 337
Query: 406 EIQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAK 439
EIQIRTE MD +A G A+H YKG TN +E++
Sbjct: 338 EIQIRTERMDEIAEKGFAAHWKYKG--TNDKESE 369
>gi|152976825|ref|YP_001376342.1| (p)ppGpp synthetase I SpoT/RelA [Bacillus cytotoxicus NVH 391-98]
gi|152025577|gb|ABS23347.1| (p)ppGpp synthetase I, SpoT/RelA [Bacillus cytotoxicus NVH 391-98]
Length = 727
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 162/319 (50%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD +SAG L VVE V+++ + A L+ ++ +
Sbjct: 55 IQVAGILVDLHMDPSTVSAGFLHDVVEDTEVTLEDIEREFSKEIAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP+ +Q I+ E ++I
Sbjct: 112 KYKSHEQQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED S RYL P Y + ++ + +D +++ ++
Sbjct: 172 APLAHRLGINTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLD----EVMTSIQE 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ D+S GR K YS +K+ + E+ D+L +RV++ +
Sbjct: 228 KLNEVSIHPDIS--GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+QIRT+
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTV-IGPKGD--PL-EVQIRTK 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 331 EMHEIAEYGIAAHWAYKEG 349
>gi|449484441|ref|XP_004156884.1| PREDICTED: LOW QUALITY PROTEIN: GTP pyrophosphokinase-like [Cucumis
sativus]
Length = 883
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 128/410 (31%), Positives = 205/410 (50%), Gaps = 34/410 (8%)
Query: 66 GAFNELTERMNVLSSSSSRLLFKALKLSIPMLQSLPLSPDSRSP-LTKALSVALLLADLQ 124
G + +L ++ LS L+ ALKL+ S P + + VA +L +L+
Sbjct: 130 GLWEDLKPTISYLSPKELELVHNALKLAFEAHDGQ--KRRSGEPFIIHPVEVARILGELE 187
Query: 125 MDAEVISAGLLRQVVE-SGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQ----VLD 179
+D E I+AGLL VE + V+ +++ + G H++ +V LK + +
Sbjct: 188 LDWETIAAGLLHDTVEDTDFVTFEKIEEEFGATVRHIVEGETKVSKLGKLKCKNECNSVQ 247
Query: 180 DETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHA 238
D A LR+ F ++R +I+ LA RL MR L ++P ++Q I+ E +++ APLA
Sbjct: 248 DVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIARETLQVFAPLAKL 307
Query: 239 VATNYLSFELEDLSFRYLFPFSYLFVDTWL----RSHETGSKPLIDIYKEQLLQCLKTDA 294
+ + ELE+LSF Y P Y V + + HE K LI+ K+ L++ ++ D
Sbjct: 308 LGMYQIKSELENLSFMYTNPEDYSKVKRRVADLSKEHE---KELIEA-KKILMKRIQEDQ 363
Query: 295 TLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG-- 352
L + V+ K YS K +LK EVN + LR+II+P + +VG
Sbjct: 364 FLDLMTMRTDVRSVCKEPYSIYKAVLKSQCSISEVNQIAQLRIIIQPKKGI----DVGPL 419
Query: 353 ---ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQI 409
++ CY ++ +W +P KDYIA PK NGY+SLH V + ++ +E+QI
Sbjct: 420 CSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTV-IPFLYESMFRLEVQI 478
Query: 410 RTEEMDMLAVNGTASHAFYKGGLTNP-------EEAKRLKAIMLAAAELA 452
RTEEMD++A G A+H G +T+P + R KA+ L+ A +A
Sbjct: 479 RTEEMDLIAERGIATHYCGGGLVTSPVRNSMPNSRSSRGKAVCLSDANIA 528
>gi|49483878|ref|YP_041102.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus MRSA252]
gi|87162370|ref|YP_494285.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|151221748|ref|YP_001332570.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus str.
Newman]
gi|161509859|ref|YP_001575518.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|257425758|ref|ZP_05602182.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus 55/2053]
gi|257428418|ref|ZP_05604816.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus 65-1322]
gi|257431056|ref|ZP_05607435.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus 68-397]
gi|257433742|ref|ZP_05610100.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus E1410]
gi|257436657|ref|ZP_05612701.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus M876]
gi|258450540|ref|ZP_05698602.1| GTP pyrophosphokinase [Staphylococcus aureus A5948]
gi|282904214|ref|ZP_06312102.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus C160]
gi|282906040|ref|ZP_06313895.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus Btn1260]
gi|282908953|ref|ZP_06316771.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282911270|ref|ZP_06319072.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282914439|ref|ZP_06322225.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus M899]
gi|282916902|ref|ZP_06324660.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus D139]
gi|282919408|ref|ZP_06327143.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus C427]
gi|282920183|ref|ZP_06327908.1| GTP pyrophosphokinase [Staphylococcus aureus A9765]
gi|282924732|ref|ZP_06332400.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus C101]
gi|283770708|ref|ZP_06343600.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus H19]
gi|283958394|ref|ZP_06375845.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293503512|ref|ZP_06667359.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus 58-424]
gi|293510530|ref|ZP_06669236.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus M809]
gi|293531071|ref|ZP_06671753.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus M1015]
gi|294848663|ref|ZP_06789409.1| GTP pyrophosphokinase [Staphylococcus aureus A9754]
gi|297590823|ref|ZP_06949461.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus MN8]
gi|384547864|ref|YP_005737117.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus ED133]
gi|384867394|ref|YP_005747590.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus TCH60]
gi|386729333|ref|YP_006195716.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus 71193]
gi|386831240|ref|YP_006237894.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus HO 5096
0412]
gi|418978356|ref|ZP_13526157.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus DR10]
gi|422742582|ref|ZP_16796585.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus MRSA177]
gi|422746071|ref|ZP_16800004.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus MRSA131]
gi|59798275|sp|Q6GG70.1|RELA_STAAR RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
I
gi|49242007|emb|CAG40705.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus MRSA252]
gi|87128344|gb|ABD22858.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|150374548|dbj|BAF67808.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus str.
Newman]
gi|160368668|gb|ABX29639.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|257271452|gb|EEV03598.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus 55/2053]
gi|257275259|gb|EEV06746.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus 65-1322]
gi|257278259|gb|EEV08901.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus 68-397]
gi|257281835|gb|EEV11972.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus E1410]
gi|257284008|gb|EEV14131.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus M876]
gi|257861698|gb|EEV84497.1| GTP pyrophosphokinase [Staphylococcus aureus A5948]
gi|282313567|gb|EFB43962.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus C101]
gi|282317218|gb|EFB47592.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus C427]
gi|282319389|gb|EFB49741.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus D139]
gi|282321620|gb|EFB51945.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus M899]
gi|282324965|gb|EFB55275.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282327217|gb|EFB57512.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331332|gb|EFB60846.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus Btn1260]
gi|282594531|gb|EFB99516.1| GTP pyrophosphokinase [Staphylococcus aureus A9765]
gi|282595832|gb|EFC00796.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus C160]
gi|283460855|gb|EFC07945.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus H19]
gi|283790543|gb|EFC29360.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290920339|gb|EFD97405.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus M1015]
gi|291095178|gb|EFE25443.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus 58-424]
gi|291466894|gb|EFF09414.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus M809]
gi|294824689|gb|EFG41112.1| GTP pyrophosphokinase [Staphylococcus aureus A9754]
gi|297575709|gb|EFH94425.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus MN8]
gi|298694913|gb|ADI98135.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus ED133]
gi|312437899|gb|ADQ76970.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus TCH60]
gi|320140479|gb|EFW32333.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus MRSA131]
gi|320144018|gb|EFW35787.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus MRSA177]
gi|379993972|gb|EIA15417.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus DR10]
gi|384230626|gb|AFH69873.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus 71193]
gi|385196632|emb|CCG16262.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus HO 5096
0412]
Length = 736
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V++ A ++ ++K +
Sbjct: 62 IQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKEMFNEEVARIVDGVTKLKK---V 118
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 119 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIY 178
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I E + ++T
Sbjct: 179 APLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYI----ETAIDRIRT 234
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ D++ GR K YS +K++K + +++ D+L +RVI+ N +N
Sbjct: 235 EMDRMNIEGDIN--GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV----NSIND---- 284
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 285 ---CYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV-VGPNGD--PL-EIQIRTF 337
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A +G A+H YK G
Sbjct: 338 DMHEIAEHGVAAHWAYKEG 356
>gi|418912249|ref|ZP_13466230.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG547]
gi|377722506|gb|EHT46632.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG547]
Length = 738
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V++ A ++ ++K +
Sbjct: 55 IQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKEMFNEEVARIVDGVTKLKK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 112 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I E + ++T
Sbjct: 172 APLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYI----ETAIDRIRT 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ D++ GR K YS +K++K + +++ D+L +RVI+ N +N
Sbjct: 228 EMDRMNIEGDIN--GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV----NSIND---- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 278 ---CYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV-VGPNGD--PL-EIQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A +G A+H YK G
Sbjct: 331 DMHEIAEHGVAAHWAYKEG 349
>gi|379021418|ref|YP_005298080.1| GTP pyrophosphokinase , (p)ppGppsynthetase I [Staphylococcus aureus
subsp. aureus M013]
gi|418562634|ref|ZP_13127091.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21262]
gi|418950240|ref|ZP_13502432.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-160]
gi|359830727|gb|AEV78705.1| GTP pyrophosphokinase , (p)ppGppsynthetase I [Staphylococcus aureus
subsp. aureus M013]
gi|371973738|gb|EHO91086.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21262]
gi|375377478|gb|EHS80945.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-160]
Length = 729
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V++ A ++ ++K +
Sbjct: 55 IQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKEMFNEEVARIVDGVTKLKK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 112 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I E + ++T
Sbjct: 172 APLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYI----ETAIDRIRT 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ D++ GR K YS +K++K + +++ D+L +RVI+ N +N
Sbjct: 228 EMDRMNIEGDIN--GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV----NSIND---- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 278 ---CYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV-VGPNGD--PL-EIQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A +G A+H YK G
Sbjct: 331 DMHEIAEHGVAAHWAYKEG 349
>gi|291557492|emb|CBL34609.1| (p)ppGpp synthetase, RelA/SpoT family [Eubacterium siraeum V10Sc8a]
Length = 725
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 170/338 (50%), Gaps = 27/338 (7%)
Query: 110 LTKALSVALLLAD-LQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVK 168
+T ++VA +L + MD + I A LL VVE V + ++ + G AHL+ ++
Sbjct: 47 ITHPVAVAYILVEQFCMDTDTICAALLHDVVEDTDVGLDVIQKKFGEDVAHLVDGVTKIG 106
Query: 169 NNVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLE 227
+ L +++ A +RK + DIR +I+ LA RL MR L P +Q SLE
Sbjct: 107 Q---VPLNTREEQQAENIRKILIAMSKDIRVIIIKLADRLHNMRTLASRPPEKQRKTSLE 163
Query: 228 VMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLL 287
M +AP+AH + + + E+EDL+ RYL P+ + +++ L H+ ID K +
Sbjct: 164 TMNFYAPIAHRLGISDVKEEMEDLALRYLDPYGFKEIESLLDVHKDERDTFIDKIKGMIR 223
Query: 288 QCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVN 347
+ ++D+ ++GR KS YS KK+ G+ E+ D+ +R+I++
Sbjct: 224 E------RISDIQPPPIIEGRVKSIYSIYKKVYVKGKDFSEIYDIYAVRIILQTVVE--- 274
Query: 348 TSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEI 407
CY II +++ +P+R KDYIA PK N Y+SLH V G+ E+
Sbjct: 275 --------CYNVLGIIHDMFRPIPYRFKDYIAMPKPNRYQSLHTTV----IGREGIPFEV 322
Query: 408 QIRTEEMDMLAVNGTASHAFYKGGLT-NPEEAKRLKAI 444
QIRT+EM A G A+H YK G++ N KR I
Sbjct: 323 QIRTQEMHNTAQYGVAAHWKYKAGISGNVAGEKRFDWI 360
>gi|228993146|ref|ZP_04153068.1| GTP pyrophosphokinase [Bacillus pseudomycoides DSM 12442]
gi|228999195|ref|ZP_04158776.1| GTP pyrophosphokinase [Bacillus mycoides Rock3-17]
gi|229006742|ref|ZP_04164376.1| GTP pyrophosphokinase [Bacillus mycoides Rock1-4]
gi|228754603|gb|EEM04014.1| GTP pyrophosphokinase [Bacillus mycoides Rock1-4]
gi|228760540|gb|EEM09505.1| GTP pyrophosphokinase [Bacillus mycoides Rock3-17]
gi|228766605|gb|EEM15246.1| GTP pyrophosphokinase [Bacillus pseudomycoides DSM 12442]
Length = 728
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 159/319 (49%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD +SAG L VVE V+++ + A L+ ++ +
Sbjct: 55 IQVAGILVDLHMDPSTVSAGFLHDVVEDTEVTLEDIEREFNKEIAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP+ +Q I+ E ++I
Sbjct: 112 KYKSHEQQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED S RYL P Y + ++ + +D + LK
Sbjct: 172 APLAHRLGINTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVMTGIRDKLKE 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
A D + GR K YS +K+ + E+ D+L +RV++ +
Sbjct: 232 VAIQPD------ISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+QIRT+
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTV-IGPKGD--PL-EVQIRTK 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 331 EMHEIAEYGIAAHWAYKEG 349
>gi|57650515|ref|YP_186528.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus COL]
gi|88195445|ref|YP_500249.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|221141097|ref|ZP_03565590.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|284024690|ref|ZP_06379088.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus 132]
gi|384550458|ref|YP_005739710.1| GTP pyrophosphokinase, (p)ppGpp synthetase I, RelA [Staphylococcus
aureus subsp. aureus JKD6159]
gi|384862233|ref|YP_005744953.1| GTP pyrophosphokinase, (p)ppGpp synthetase I, RelA [Staphylococcus
aureus subsp. aureus str. JKD6008]
gi|384870173|ref|YP_005752887.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus T0131]
gi|385781917|ref|YP_005758088.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
11819-97]
gi|387143236|ref|YP_005731629.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus TW20]
gi|387602972|ref|YP_005734493.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Staphylococcus
aureus subsp. aureus ST398]
gi|387780722|ref|YP_005755520.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus LGA251]
gi|404478985|ref|YP_006710415.1| GTP pyrophosphokinase [Staphylococcus aureus 08BA02176]
gi|415682436|ref|ZP_11447752.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CGS00]
gi|415686173|ref|ZP_11450310.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CGS01]
gi|416839675|ref|ZP_11903056.1| GTP pyrophosphokinase [Staphylococcus aureus O11]
gi|416846584|ref|ZP_11906633.1| GTP pyrophosphokinase [Staphylococcus aureus O46]
gi|417649291|ref|ZP_12299095.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21189]
gi|417653377|ref|ZP_12303108.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21193]
gi|417797567|ref|ZP_12444763.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21305]
gi|417799958|ref|ZP_12447090.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21310]
gi|417887946|ref|ZP_12532065.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21195]
gi|417896907|ref|ZP_12540850.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21235]
gi|417901229|ref|ZP_12545106.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21266]
gi|417903131|ref|ZP_12546986.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21269]
gi|418277930|ref|ZP_12892150.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21178]
gi|418285658|ref|ZP_12898326.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21209]
gi|418309946|ref|ZP_12921496.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21331]
gi|418318525|ref|ZP_12929927.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21232]
gi|418321376|ref|ZP_12932722.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus VCU006]
gi|418560386|ref|ZP_13124901.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21252]
gi|418564712|ref|ZP_13129133.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21264]
gi|418571915|ref|ZP_13136135.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21283]
gi|418574398|ref|ZP_13138567.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21333]
gi|418579557|ref|ZP_13143652.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1114]
gi|418582560|ref|ZP_13146638.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1605]
gi|418597458|ref|ZP_13160986.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21342]
gi|418597992|ref|ZP_13161506.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21343]
gi|418601540|ref|ZP_13164966.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21345]
gi|418641811|ref|ZP_13204016.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-24]
gi|418644086|ref|ZP_13206237.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-55]
gi|418648467|ref|ZP_13210511.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-88]
gi|418650678|ref|ZP_13212696.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-91]
gi|418654995|ref|ZP_13216878.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-105]
gi|418660671|ref|ZP_13222290.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-111]
gi|418872843|ref|ZP_13427169.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-125]
gi|418875573|ref|ZP_13429829.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIGC93]
gi|418892363|ref|ZP_13446476.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1176]
gi|418898269|ref|ZP_13452339.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
CIGC341D]
gi|418901138|ref|ZP_13455194.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1214]
gi|418903939|ref|ZP_13457980.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1770]
gi|418906577|ref|ZP_13460603.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|418909485|ref|ZP_13463480.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG149]
gi|418917531|ref|ZP_13471490.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1267]
gi|418923315|ref|ZP_13477231.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1233]
gi|418925891|ref|ZP_13479793.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG2018]
gi|418928982|ref|ZP_13482868.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1612]
gi|418946741|ref|ZP_13499153.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-157]
gi|418953538|ref|ZP_13505527.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-189]
gi|418982639|ref|ZP_13530347.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1242]
gi|418986307|ref|ZP_13533991.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1500]
gi|419773205|ref|ZP_14299216.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus CO-23]
gi|421148486|ref|ZP_15608146.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|424785467|ref|ZP_18212270.1| GTP pyrophosphokinase [Staphylococcus aureus CN79]
gi|440707473|ref|ZP_20888172.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21282]
gi|440735083|ref|ZP_20914694.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus DSM
20231]
gi|443639864|ref|ZP_21123864.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21196]
gi|57284701|gb|AAW36795.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus COL]
gi|87203003|gb|ABD30813.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|269941119|emb|CBI49505.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus TW20]
gi|283470910|emb|CAQ50121.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Staphylococcus
aureus subsp. aureus ST398]
gi|302333307|gb|ADL23500.1| GTP pyrophosphokinase, (p)ppGpp synthetase I, RelA [Staphylococcus
aureus subsp. aureus JKD6159]
gi|302751462|gb|ADL65639.1| GTP pyrophosphokinase, (p)ppGpp synthetase I, RelA [Staphylococcus
aureus subsp. aureus str. JKD6008]
gi|315195536|gb|EFU25923.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CGS00]
gi|315198666|gb|EFU28994.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CGS01]
gi|323440813|gb|EGA98522.1| GTP pyrophosphokinase [Staphylococcus aureus O11]
gi|323442838|gb|EGB00463.1| GTP pyrophosphokinase [Staphylococcus aureus O46]
gi|329314308|gb|AEB88721.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus T0131]
gi|329728397|gb|EGG64834.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21189]
gi|329733068|gb|EGG69405.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21193]
gi|334267059|gb|EGL85529.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21305]
gi|334272490|gb|EGL90855.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21310]
gi|341840173|gb|EGS81693.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21235]
gi|341846388|gb|EGS87585.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21266]
gi|341850305|gb|EGS91429.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21269]
gi|341856975|gb|EGS97802.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21195]
gi|344177824|emb|CCC88303.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus LGA251]
gi|364522906|gb|AEW65656.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
11819-97]
gi|365169468|gb|EHM60716.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21209]
gi|365172889|gb|EHM63551.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21178]
gi|365225608|gb|EHM66851.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus VCU006]
gi|365237403|gb|EHM78249.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21331]
gi|365242988|gb|EHM83683.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21232]
gi|371971946|gb|EHO89337.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21252]
gi|371975849|gb|EHO93141.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21264]
gi|371978407|gb|EHO95656.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21283]
gi|371979125|gb|EHO96360.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21333]
gi|374394585|gb|EHQ65867.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21342]
gi|374398254|gb|EHQ69438.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21345]
gi|374400300|gb|EHQ71418.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21343]
gi|375018266|gb|EHS11846.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-24]
gi|375026380|gb|EHS19763.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-88]
gi|375026607|gb|EHS19987.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-55]
gi|375027964|gb|EHS21322.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-91]
gi|375031476|gb|EHS24756.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-111]
gi|375038457|gb|EHS31437.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-105]
gi|375366783|gb|EHS70764.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-125]
gi|375374758|gb|EHS78381.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-189]
gi|375377521|gb|EHS80983.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-157]
gi|377697584|gb|EHT21939.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1114]
gi|377702535|gb|EHT26857.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1214]
gi|377703685|gb|EHT27998.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1500]
gi|377704920|gb|EHT29229.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1242]
gi|377710970|gb|EHT35208.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1605]
gi|377730657|gb|EHT54724.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1176]
gi|377735274|gb|EHT59310.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1233]
gi|377738894|gb|EHT62903.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1612]
gi|377742954|gb|EHT66939.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1770]
gi|377744960|gb|EHT68937.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG2018]
gi|377750705|gb|EHT74643.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG1267]
gi|377751862|gb|EHT75789.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG149]
gi|377761304|gb|EHT85180.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
CIGC341D]
gi|377763482|gb|EHT87338.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|377769645|gb|EHT93413.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIGC93]
gi|383973029|gb|EID89050.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus CO-23]
gi|394331629|gb|EJE57712.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|404440474|gb|AFR73667.1| GTP pyrophosphokinase [Staphylococcus aureus 08BA02176]
gi|421956877|gb|EKU09206.1| GTP pyrophosphokinase [Staphylococcus aureus CN79]
gi|436431178|gb|ELP28532.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus DSM
20231]
gi|436506229|gb|ELP42068.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21282]
gi|443406139|gb|ELS64723.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus 21196]
Length = 729
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V++ A ++ ++K +
Sbjct: 55 IQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKEMFNEEVARIVDGVTKLKK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 112 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I E + ++T
Sbjct: 172 APLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYI----ETAIDRIRT 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ D++ GR K YS +K++K + +++ D+L +RVI+ N +N
Sbjct: 228 EMDRMNIEGDIN--GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV----NSIND---- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 278 ---CYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV-VGPNGD--PL-EIQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A +G A+H YK G
Sbjct: 331 DMHEIAEHGVAAHWAYKEG 349
>gi|49486467|ref|YP_043688.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus MSSA476]
gi|253733115|ref|ZP_04867280.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus TCH130]
gi|257793707|ref|ZP_05642686.1| ppGpp hydrolase [Staphylococcus aureus A9781]
gi|258410994|ref|ZP_05681274.1| ppGpp hydrolase [Staphylococcus aureus A9763]
gi|258420205|ref|ZP_05683160.1| GTP pyrophosphokinase [Staphylococcus aureus A9719]
gi|258438207|ref|ZP_05689491.1| ppGpp hydrolase [Staphylococcus aureus A9299]
gi|258443670|ref|ZP_05692009.1| ppGpp hydrolase [Staphylococcus aureus A8115]
gi|258446877|ref|ZP_05695031.1| GTP pyrophosphokinase [Staphylococcus aureus A6300]
gi|258448791|ref|ZP_05696903.1| GTP pyrophosphokinase [Staphylococcus aureus A6224]
gi|258453609|ref|ZP_05701587.1| ppGpp hydrolase [Staphylococcus aureus A5937]
gi|282893138|ref|ZP_06301372.1| GTP pyrophosphokinase [Staphylococcus aureus A8117]
gi|295406755|ref|ZP_06816560.1| GTP pyrophosphokinase [Staphylococcus aureus A8819]
gi|297207646|ref|ZP_06924081.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297245662|ref|ZP_06929527.1| GTP pyrophosphokinase [Staphylococcus aureus A8796]
gi|300911728|ref|ZP_07129171.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus TCH70]
gi|418424820|ref|ZP_12997933.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS1]
gi|418427775|ref|ZP_13000780.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS2]
gi|418430620|ref|ZP_13003529.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS3a]
gi|418433912|ref|ZP_13006353.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS4]
gi|418440156|ref|ZP_13011856.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS6]
gi|418449252|ref|ZP_13020636.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS9]
gi|418452062|ref|ZP_13023396.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS10]
gi|418455058|ref|ZP_13026317.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS11a]
gi|418457936|ref|ZP_13029135.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS11b]
gi|424775017|ref|ZP_18202016.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus CM05]
gi|448740360|ref|ZP_21722339.1| GTP pyrophosphokinase [Staphylococcus aureus KT/314250]
gi|448743282|ref|ZP_21725192.1| GTP pyrophosphokinase [Staphylococcus aureus KT/Y21]
gi|59798269|sp|Q6G8T5.1|RELA_STAAS RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
I
gi|59798429|sp|Q99TL8.2|RELA_STAAN RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
I
gi|59800175|sp|P0A0E9.1|RELA_STAAW RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
I
gi|59800176|sp|P0A0F0.1|RELA_STAAU RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
I
gi|2580433|dbj|BAA23138.1| ppGpp hydrolase [Staphylococcus aureus]
gi|49244910|emb|CAG43371.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus MSSA476]
gi|253728871|gb|EES97600.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus TCH130]
gi|257787679|gb|EEV26019.1| ppGpp hydrolase [Staphylococcus aureus A9781]
gi|257840144|gb|EEV64608.1| ppGpp hydrolase [Staphylococcus aureus A9763]
gi|257843916|gb|EEV68310.1| GTP pyrophosphokinase [Staphylococcus aureus A9719]
gi|257848251|gb|EEV72242.1| ppGpp hydrolase [Staphylococcus aureus A9299]
gi|257851076|gb|EEV75019.1| ppGpp hydrolase [Staphylococcus aureus A8115]
gi|257854452|gb|EEV77401.1| GTP pyrophosphokinase [Staphylococcus aureus A6300]
gi|257858069|gb|EEV80958.1| GTP pyrophosphokinase [Staphylococcus aureus A6224]
gi|257864340|gb|EEV87090.1| ppGpp hydrolase [Staphylococcus aureus A5937]
gi|282764456|gb|EFC04582.1| GTP pyrophosphokinase [Staphylococcus aureus A8117]
gi|294968502|gb|EFG44526.1| GTP pyrophosphokinase [Staphylococcus aureus A8819]
gi|296887663|gb|EFH26561.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297177313|gb|EFH36565.1| GTP pyrophosphokinase [Staphylococcus aureus A8796]
gi|300885974|gb|EFK81176.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus TCH70]
gi|387717760|gb|EIK05758.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS3a]
gi|387718063|gb|EIK06058.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS2]
gi|387719270|gb|EIK07221.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS1]
gi|387724807|gb|EIK12446.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS4]
gi|387729870|gb|EIK17283.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS6]
gi|387736462|gb|EIK23556.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS9]
gi|387744943|gb|EIK31707.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS10]
gi|387745111|gb|EIK31873.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS11a]
gi|387746704|gb|EIK33433.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS11b]
gi|402346875|gb|EJU81945.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus CM05]
gi|408423735|emb|CCJ11146.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus ST228]
gi|408425725|emb|CCJ13112.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus ST228]
gi|408427712|emb|CCJ15075.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus ST228]
gi|408429701|emb|CCJ26866.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus ST228]
gi|408431688|emb|CCJ19003.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus ST228]
gi|408433682|emb|CCJ20967.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus ST228]
gi|408435674|emb|CCJ22934.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus ST228]
gi|408437658|emb|CCJ24901.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus ST228]
gi|445548844|gb|ELY17091.1| GTP pyrophosphokinase [Staphylococcus aureus KT/314250]
gi|445563411|gb|ELY19572.1| GTP pyrophosphokinase [Staphylococcus aureus KT/Y21]
Length = 736
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V++ A ++ ++K +
Sbjct: 62 IQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKEMFNEEVARIVDGVTKLKK---V 118
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 119 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIY 178
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I E + ++T
Sbjct: 179 APLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYI----ETAIDRIRT 234
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ D++ GR K YS +K++K + +++ D+L +RVI+ N +N
Sbjct: 235 EMDRMNIEGDIN--GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV----NSIND---- 284
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 285 ---CYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV-VGPNGD--PL-EIQIRTF 337
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A +G A+H YK G
Sbjct: 338 DMHEIAEHGVAAHWAYKEG 356
>gi|399050755|ref|ZP_10740799.1| (p)ppGpp synthetase, RelA/SpoT family [Brevibacillus sp. CF112]
gi|433545167|ref|ZP_20501527.1| GTP pyrophosphokinase [Brevibacillus agri BAB-2500]
gi|398051471|gb|EJL43793.1| (p)ppGpp synthetase, RelA/SpoT family [Brevibacillus sp. CF112]
gi|432183556|gb|ELK41097.1| GTP pyrophosphokinase [Brevibacillus agri BAB-2500]
Length = 723
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 166/319 (52%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
++VA +LA+L MDA I+AG L VVE V++ +R++ G A L+ +++ +
Sbjct: 51 IAVAGILANLHMDAVTIAAGFLHDVVEDTDVTLDDLREQFGPDVALLVDGVTKLEK---I 107
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK + DIR +++ LA RL MR L ++ +Q IS E ++I
Sbjct: 108 KYKSKEEQLAENHRKMLVAMAQDIRVIMIKLADRLHNMRTLRHMSEEKQREISDETLEIF 167
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + +ELED + RYL P Y + ++ + ++ + + +
Sbjct: 168 APLAHRLGIASVKWELEDTALRYLNPQQYYRIVNLMQKKRVEREAYLNEASDTIRE---- 223
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
L +L + + GR K YS KK+ K + E+ D+L LR+I+
Sbjct: 224 --KLGELNIEAEISGRPKHIYSIFKKMTKQNKQFNEIYDLLALRIIVNDI---------- 271
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
R CY I+ +LWK MP R KDYIA PK N Y+SLH V + G+ PL E+QIRT
Sbjct: 272 -RDCYAVLGIVHTLWKPMPGRFKDYIAMPKTNMYQSLHTTV-IGPKGE--PL-EVQIRTW 326
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M A G A+H YK G
Sbjct: 327 DMHQTAEIGIAAHWAYKEG 345
>gi|303327509|ref|ZP_07357950.1| GTP diphosphokinase [Desulfovibrio sp. 3_1_syn3]
gi|302862449|gb|EFL85382.1| GTP diphosphokinase [Desulfovibrio sp. 3_1_syn3]
Length = 719
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 166/325 (51%), Gaps = 33/325 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L+ L+VA LA++ D ++AGLL VE +I+++ + G A ++ ++
Sbjct: 46 LSHPLAVADTLAEMGFDEPTVAAGLLHDTVEDTKATIEEIDENFGEEVADIVDGVTKISM 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + ++ A +RK L +D+R L++ LA R M LD+ ++Q I+ E
Sbjct: 106 ---IPFENKEEAQAENIRKMILAMSHDMRVLMVKLADRQHNMSTLDFQKAHKQKRIAQET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M I+APLA+ + L LEDLSF+YL P + +D WL H+ K +ID
Sbjct: 163 MDIYAPLANRLGLYMLKRNLEDLSFKYLRPDVFNQIDHWLDKHQVVEKHIID-------- 214
Query: 289 CLKTDATLADLVEDVSVQ----GRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSN 344
K + DL+ +Q GR K +YS KK+ +E++D++ RV++K +
Sbjct: 215 --KVVGLIQDLLASNHIQGQVYGRIKHKYSIYKKMQSQSLTLDEMHDIMAFRVLVKDIKD 272
Query: 345 LVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPL 404
CY ++ S W+ + R KDYI+ PKANGY+SLH V + G+
Sbjct: 273 -----------CYAVLGLVHSQWRPVHGRFKDYISMPKANGYQSLHTTV-IGPEGER--- 317
Query: 405 MEIQIRTEEMDMLAVNGTASHAFYK 429
+EIQIRTE+M A +G A+H YK
Sbjct: 318 IEIQIRTEDMHRQAEHGVAAHWLYK 342
>gi|167749833|ref|ZP_02421960.1| hypothetical protein EUBSIR_00801 [Eubacterium siraeum DSM 15702]
gi|167657145|gb|EDS01275.1| RelA/SpoT family protein [Eubacterium siraeum DSM 15702]
Length = 725
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 170/338 (50%), Gaps = 27/338 (7%)
Query: 110 LTKALSVALLLAD-LQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVK 168
+T ++VA +L + MD + I A LL VVE V + ++ + G AHL+ ++
Sbjct: 47 ITHPVAVAYILVEQFCMDTDTICAALLHDVVEDTDVGLDVIQKKFGEDVAHLVDGVTKIG 106
Query: 169 NNVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLE 227
+ L +++ A +RK + DIR +I+ LA RL MR L P +Q SLE
Sbjct: 107 Q---VPLNTREEQQAENIRKILIAMSKDIRVIIIKLADRLHNMRTLASRPPEKQRKTSLE 163
Query: 228 VMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLL 287
M +AP+AH + + + E+EDL+ RYL P+ + +++ L H+ ID K +
Sbjct: 164 TMNFYAPIAHRLGISDVKEEMEDLALRYLDPYGFKEIESLLDVHKDERDTFIDKIKGMIR 223
Query: 288 QCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVN 347
+ ++D+ ++GR KS YS KK+ G+ E+ D+ +R+I++
Sbjct: 224 E------RISDIQPPPIIEGRVKSIYSIYKKVYVKGKDFSEIYDIYAVRIILQTVVE--- 274
Query: 348 TSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEI 407
CY II +++ +P+R KDYIA PK N Y+SLH V G+ E+
Sbjct: 275 --------CYNVLGIIHDMFRPIPYRFKDYIAMPKPNRYQSLHTTV----IGREGIPFEV 322
Query: 408 QIRTEEMDMLAVNGTASHAFYKGGLT-NPEEAKRLKAI 444
QIRT+EM A G A+H YK G++ N KR I
Sbjct: 323 QIRTQEMHNTAQYGVAAHWKYKAGISGNVAGEKRFDWI 360
>gi|418446239|ref|ZP_13017712.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS8]
gi|387735171|gb|EIK22308.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS8]
Length = 736
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V++ A ++ ++K +
Sbjct: 62 IQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKEMFNEEVARIVDGVTKLKK---V 118
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 119 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIY 178
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I E + ++T
Sbjct: 179 APLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYI----ETAIDRIRT 234
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ D++ GR K YS +K++K + +++ D+L +RVI+ N +N
Sbjct: 235 EMDRMNIEGDIN--GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV----NSIND---- 284
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 285 ---CYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV-VGPNGD--PL-EIQIRTF 337
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A +G A+H YK G
Sbjct: 338 DMHEIAEHGVAAHWAYKEG 356
>gi|258424059|ref|ZP_05686941.1| GTP pyrophosphokinase [Staphylococcus aureus A9635]
gi|257845680|gb|EEV69712.1| GTP pyrophosphokinase [Staphylococcus aureus A9635]
Length = 736
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V++ A ++ ++K +
Sbjct: 62 IQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKEMFNEEVARIVDGVTKLKK---V 118
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 119 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIY 178
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I E + ++T
Sbjct: 179 APLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYI----ETAIDRIRT 234
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ D++ GR K YS +K++K + +++ D+L +RVI+ N +N
Sbjct: 235 EMDRMNIEGDIN--GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV----NSIND---- 284
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 285 ---CYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV-VGPNGD--PL-EIQIRTF 337
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A +G A+H YK G
Sbjct: 338 DMHEIAEHGVAAHWAYKEG 356
>gi|304316999|ref|YP_003852144.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778501|gb|ADL69060.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 718
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 119/365 (32%), Positives = 184/365 (50%), Gaps = 36/365 (9%)
Query: 79 SSSSSRLLFKALKLSIPMLQSLPLSPDSRSP-LTKALSVALLLADLQMDAEVISAGLLRQ 137
S + L+FKA ++ + +S P + + VA++L +L++D I++GLL
Sbjct: 15 SENDINLIFKAYDYALKAHEGQ--YRNSGEPYIVHPVEVAMILTNLELDVSTIASGLLHD 72
Query: 138 VVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRKFCLTY-YDI 196
V+E ++ +++ G A L+ ++ + K +V ++ A +RK + DI
Sbjct: 73 VIEDTSITYDDIKNEFGQEIADLVDGVTKL-GMIEYKSKV--EQQAENMRKMLIAMAKDI 129
Query: 197 RALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYL 256
R +++ LA RL MR L YL +Q + E ++I+AP+AH + + + +ELEDLS RYL
Sbjct: 130 RVIMIKLADRLHNMRTLKYLSEEKQKEKAQETLEIYAPIAHRLGMSMIKWELEDLSLRYL 189
Query: 257 FPFSYLF----VDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSR 312
P Y V + E K LID KE+ L ++ V GR K
Sbjct: 190 HPDDYYSLVEKVAKKRKEREESIKELIDKLKEK----------LNEIGIKAEVDGRPKHF 239
Query: 313 YSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPH 372
YS KK+ + + E++ D++ +RVI VNT + CY T + +LWK MP
Sbjct: 240 YSIYKKMKQQNKTFEQIYDLMAVRVI-------VNTV----KDCYGTLGAVHTLWKPMPG 288
Query: 373 RTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGGL 432
R KDYIA PK N Y+SLH V + G+ EIQIRT +M A G A+H YK G
Sbjct: 289 RFKDYIAMPKPNMYQSLHTTV-IGPKGEP---FEIQIRTWDMHRTAEYGIAAHWKYKEGK 344
Query: 433 TNPEE 437
+ +E
Sbjct: 345 SYEDE 349
>gi|59798426|sp|Q931Q4.2|RELA_STAAM RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
I
Length = 736
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V++ A ++ ++K +
Sbjct: 62 IQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKEMFNEEVARIVDGVTKLKK---V 118
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 119 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIY 178
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I E + ++T
Sbjct: 179 APLAHHLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYI----ETAIDRIRT 234
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ D++ GR K YS +K++K + +++ D+L +RVI+ N +N
Sbjct: 235 EMDRMNIEGDIN--GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV----NSIND---- 284
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 285 ---CYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV-VGPNGD--PL-EIQIRTF 337
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A +G A+H YK G
Sbjct: 338 DMHEIAEHGVAAHWAYKEG 356
>gi|418437259|ref|ZP_13009054.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS5]
gi|418443174|ref|ZP_13014773.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS7]
gi|387726919|gb|EIK14456.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS5]
gi|387736850|gb|EIK23938.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus VRS7]
Length = 736
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V++ A ++ ++K +
Sbjct: 62 IQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKEMFNEEVARIVDGVTKLKK---V 118
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 119 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIY 178
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I E + ++T
Sbjct: 179 APLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYI----ETAIDRIRT 234
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ D++ GR K YS +K++K + +++ D+L +RVI+ N +N
Sbjct: 235 EMDRMNIEGDIN--GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV----NSIND---- 284
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 285 ---CYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV-VGPNGD--PL-EIQIRTF 337
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A +G A+H YK G
Sbjct: 338 DMHEIAEHGVAAHWAYKEG 356
>gi|297544507|ref|YP_003676809.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842282|gb|ADH60798.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 719
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/335 (33%), Positives = 178/335 (53%), Gaps = 37/335 (11%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + V+ +LADL++D I+AGLL V+E V+ +Q+ ++ G A L+ ++
Sbjct: 45 IVHPIEVSYILADLELDITTIAAGLLHDVIEDTDVTYEQLLEKFGKEIADLVDGVTKL-G 103
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ K +V ++ A +RK + DIR +++ LA RL MR L YLP +Q + E
Sbjct: 104 KIEYKSKV--EQQAENMRKMLIAMAKDIRVILIKLADRLHNMRTLKYLPPDKQKEKAEET 161
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSY--LFVDTWLRSHETGSKPLIDIYKEQL 286
++I+AP+AH + + + +ELEDL RYL P Y L + E +E+L
Sbjct: 162 LEIYAPIAHRLGISKIKWELEDLCLRYLHPDEYYDLVEKVAAKRKE----------REEL 211
Query: 287 LQCLKTDATLADLVEDVSVQ----GRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPS 342
+Q + T T+ + ++++ +Q GR K YS KK+ + +++ D+L +R+I
Sbjct: 212 IQNIIT--TIKEKLKEMGIQAEVDGRPKHFYSIYKKMKTQNKSFDQIYDLLAVRII---- 265
Query: 343 SNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTR 402
VNT + CY I+ +LWK +P R KDYIA PK N Y+SLH V + G+
Sbjct: 266 ---VNTV----KDCYGVLGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTV-IGPKGEP- 316
Query: 403 PLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
EIQIRT EM A G A+H YK G T ++
Sbjct: 317 --FEIQIRTWEMHKTAEYGIAAHWKYKEGKTTEDK 349
>gi|384864853|ref|YP_005750212.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((p)ppGpp synthetase) [Staphylococcus
aureus subsp. aureus ECT-R 2]
gi|312830020|emb|CBX34862.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((p)ppGpp synthetase) [Staphylococcus
aureus subsp. aureus ECT-R 2]
Length = 729
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V++ A ++ ++K +
Sbjct: 55 IQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKEMFNEEVARIVDGVTKLKK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 112 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I E + ++T
Sbjct: 172 APLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYI----ETAIDRIRT 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ D++ GR K YS +K++K + +++ D+L +RVI+ N +N
Sbjct: 228 EMDRMNIEGDIN--GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV----NSIND---- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 278 ---CYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV-VGPNGD--PL-EIQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A +G A+H YK G
Sbjct: 331 DMHEIAEHGVAAHWAYKEG 349
>gi|253732290|ref|ZP_04866455.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253724079|gb|EES92808.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
Length = 736
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V++ A ++ ++K +
Sbjct: 62 IQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKEMFNEEVARIVDGVTKLKK---V 118
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 119 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIY 178
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I E + ++T
Sbjct: 179 APLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYI----ETAIDRIRT 234
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ D++ GR K YS +K++K + +++ D+L +RVI+ N +N
Sbjct: 235 EMDRMNIEGDIN--GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV----NSIND---- 284
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 285 ---CYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV-VGPNGD--PL-EIQIRTF 337
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A +G A+H YK G
Sbjct: 338 DMHEIAEHGVAAHWAYKEG 356
>gi|282928269|ref|ZP_06335874.1| GTP pyrophosphokinase [Staphylococcus aureus A10102]
gi|282590076|gb|EFB95158.1| GTP pyrophosphokinase [Staphylococcus aureus A10102]
Length = 736
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V++ A ++ ++K +
Sbjct: 62 IQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKEMFNEEVARIVDGVTKLKK---V 118
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 119 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIY 178
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I E + ++T
Sbjct: 179 APLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYI----ETAIDRIRT 234
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ D++ GR K YS +K++K + +++ D+L +RVI+ N +N
Sbjct: 235 EMDRMNIEGDIN--GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV----NSIND---- 284
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 285 ---CYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV-VGPNGD--PL-EIQIRTF 337
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A +G A+H YK G
Sbjct: 338 DMHEIAEHGVAAHWAYKEG 356
>gi|42523075|ref|NP_968455.1| GTP pyrophosphokinase [Bdellovibrio bacteriovorus HD100]
gi|39575280|emb|CAE79448.1| GTP pyrophosphokinase [Bdellovibrio bacteriovorus HD100]
Length = 738
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/384 (30%), Positives = 182/384 (47%), Gaps = 57/384 (14%)
Query: 63 KLVGAFNELTERMNVLSSSSS-RLLFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLA 121
K V ++L R+ V ++ +++ KA S M + + ++ LSVA +LA
Sbjct: 13 KPVKTVDDLLARIRVYYPNADLKIIEKAYSFSEKMHEG-QIRRSGEPYISHPLSVAAILA 71
Query: 122 DLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDE 181
D +D + I+ GLL VE +++ +R G AHL+ ++ +K + ++
Sbjct: 72 DFHLDLDTIATGLLHDTVEDTAATLEDIRREFGDVIAHLVDGVTKIGQ---MKFKNSHEK 128
Query: 182 TAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVA 240
+RK + D+R +++ LA RL MR L+++P +Q I+LE ++I+ PLA +
Sbjct: 129 QGENIRKMIVAMGKDVRVVLVKLADRLHNMRTLNFMPFEKQERIALETLEIYCPLAGRMG 188
Query: 241 TNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLV 300
+ L ELEDL FRY P D+Y E + Q KT+A +
Sbjct: 189 ISALKIELEDLCFRYYRP---------------------DMYYELVQQIKKTEAEQNRYI 227
Query: 301 EDVS---------------VQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNL 345
E+V V GR K +S +K+ ++V DVL RV+++ +
Sbjct: 228 EEVKHLIGKELTKAGFRYEVYGRSKHLWSIYRKMQSRNIDYDQVYDVLAFRVLVESVAE- 286
Query: 346 VNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLM 405
CY ++ SLWK +P R KD+IA PKAN Y+SLH V G +
Sbjct: 287 ----------CYAALGLVHSLWKPIPGRFKDFIAMPKANNYQSLHTTV----MGPGGERI 332
Query: 406 EIQIRTEEMDMLAVNGTASHAFYK 429
EIQIRT EM ++A G A+H YK
Sbjct: 333 EIQIRTSEMHLVAEKGIAAHWKYK 356
>gi|433655146|ref|YP_007298854.1| (p)ppGpp synthetase, RelA/SpoT family [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293335|gb|AGB19157.1| (p)ppGpp synthetase, RelA/SpoT family [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 718
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 119/365 (32%), Positives = 184/365 (50%), Gaps = 36/365 (9%)
Query: 79 SSSSSRLLFKALKLSIPMLQSLPLSPDSRSP-LTKALSVALLLADLQMDAEVISAGLLRQ 137
S + L+FKA ++ + +S P + + VA++L +L++D I++GLL
Sbjct: 15 SENDINLIFKAYDYALKAHEGQ--YRNSGEPYIVHPVEVAMILTNLELDVSTIASGLLHD 72
Query: 138 VVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRKFCLTY-YDI 196
V+E ++ +++ G A L+ ++ + K +V ++ A +RK + DI
Sbjct: 73 VIEDTSITYDDIKNEFGQEIADLVDGVTKL-GMIEYKSKV--EQQAENMRKMLIAMAKDI 129
Query: 197 RALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYL 256
R +++ LA RL MR L YL +Q + E ++I+AP+AH + + + +ELEDLS RYL
Sbjct: 130 RVIMIKLADRLHNMRTLKYLSEEKQKEKAQETLEIYAPIAHRLGMSMIKWELEDLSLRYL 189
Query: 257 FPFSYLF----VDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSR 312
P Y V + E K LID KE+ L ++ V GR K
Sbjct: 190 HPDDYYSLVEKVAKKRKEREESIKELIDKLKEK----------LNEIGIKAEVDGRPKHF 239
Query: 313 YSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPH 372
YS KK+ + + E++ D++ +RVI VNT + CY T + +LWK MP
Sbjct: 240 YSIYKKMKQQNKTFEQIYDLMAVRVI-------VNTV----KDCYGTLGAVHTLWKPMPG 288
Query: 373 RTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGGL 432
R KDYIA PK N Y+SLH V + G+ EIQIRT +M A G A+H YK G
Sbjct: 289 RFKDYIAMPKPNMYQSLHTTV-IGPKGEP---FEIQIRTWDMHRTAEYGIAAHWKYKEGK 344
Query: 433 TNPEE 437
+ +E
Sbjct: 345 SYEDE 349
>gi|343521362|ref|ZP_08758330.1| RelA/SpoT family protein [Parvimonas sp. oral taxon 393 str. F0440]
gi|343396568|gb|EGV09105.1| RelA/SpoT family protein [Parvimonas sp. oral taxon 393 str. F0440]
Length = 717
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 172/320 (53%), Gaps = 25/320 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
++VA +LADL MD I AGL+ ++E V+ +Q+ + A+L+ ++K +
Sbjct: 48 VAVANILADLYMDDATIIAGLMHDILEDTEVTFEQMAEMFDEEIANLVDGVTKLKK---I 104
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K Q + A LRK L DIR +I+ +A RL +R L+Y+ + +QL + E ++I+
Sbjct: 105 KYQSKQESQADNLRKMLLAMNSDIRVIIIKIADRLHNIRTLEYMKKAKQLEKAKETLEIY 164
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA+ + + + +ELEDLS RYL P Y + ++ + + +I+ E++ LK
Sbjct: 165 APLAYRLGMSNVKWELEDLSLRYLEPEIYYDLAERVKKKRSEREKIINDIIEEISISLKE 224
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ + GR KS YS KK+ K + +E+ D+ +R+I+ S+
Sbjct: 225 HNIQGE------ISGRPKSLYSIYKKMYKQNKSFDEIFDLTAVRIIVPTISD-------- 270
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I+ S WK +P R KDYIA PK N Y+SLH + +S++G + E+QIRT
Sbjct: 271 ---CYAVLGIVHSKWKPIPSRFKDYIAVPKPNLYQSLHNTL-ISNSG---DVFEVQIRTF 323
Query: 413 EMDMLAVNGTASHAFYKGGL 432
EM A G A+H YK G+
Sbjct: 324 EMHKTAEYGIAAHWKYKAGV 343
>gi|228475223|ref|ZP_04059949.1| GTP pyrophosphokinase [Staphylococcus hominis SK119]
gi|314936253|ref|ZP_07843600.1| GTP diphosphokinase [Staphylococcus hominis subsp. hominis C80]
gi|418618568|ref|ZP_13181433.1| GTP diphosphokinase [Staphylococcus hominis VCU122]
gi|228270834|gb|EEK12236.1| GTP pyrophosphokinase [Staphylococcus hominis SK119]
gi|313654872|gb|EFS18617.1| GTP diphosphokinase [Staphylococcus hominis subsp. hominis C80]
gi|374827328|gb|EHR91191.1| GTP diphosphokinase [Staphylococcus hominis VCU122]
Length = 729
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/321 (32%), Positives = 173/321 (53%), Gaps = 25/321 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V++ A ++ ++K +
Sbjct: 55 IQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKNMFNEEIARIVDGVTKLKK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L + R +Q+ IS E ++I+
Sbjct: 112 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMAREKQIRISKETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED++ RY+ Y + ++ + + Y + + ++T
Sbjct: 172 APLAHRLGINTIKWELEDIALRYIDSVQYFRIVNLMKKKRSEREA----YIQNAMDKIQT 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ ++S GR K YS +K++K + +++ D+L +RVI+ N +N
Sbjct: 228 EMNKMNIQGEIS--GRPKHIYSIYRKMVKQKKQFDQIFDLLAIRVIV----NSIND---- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 278 ---CYAILGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTV-VGPNGD--PL-EIQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGGLT 433
EM +A +G A+H YK G T
Sbjct: 331 EMHEIAEHGVAAHWAYKEGKT 351
>gi|160947570|ref|ZP_02094737.1| hypothetical protein PEPMIC_01505 [Parvimonas micra ATCC 33270]
gi|158446704|gb|EDP23699.1| RelA/SpoT family protein [Parvimonas micra ATCC 33270]
Length = 717
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 171/320 (53%), Gaps = 25/320 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
++VA +LADL MD I AGL+ ++E V+ +++ G A+L+ ++K +
Sbjct: 48 VAVANILADLYMDDATIIAGLMHDILEDTEVTFEEMSGMFGEEIANLVDGVTKLKK---I 104
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K Q + A LRK L DIR +I+ +A RL +R L+Y+ + +QL + E ++I+
Sbjct: 105 KYQSKQESQADNLRKMLLAMNSDIRVIIIKIADRLHNIRTLEYMKKAKQLEKAKETLEIY 164
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA+ + + + +ELEDLS RYL P Y + ++ + + +I+ E++ LK
Sbjct: 165 APLAYRLGMSNVKWELEDLSLRYLEPEIYYDLAERVKKKRSEREKIINDIIEEISISLKE 224
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ + GR KS YS KK+ K + +E+ D+ +R+I+ S+
Sbjct: 225 HNIQGE------ISGRPKSLYSIYKKMYKQNKSFDEIFDLTAIRIIVPTISD-------- 270
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I+ S WK +P R KDYIA PK N Y+SLH + +S +G + E+QIRT
Sbjct: 271 ---CYAVLGIVHSKWKPIPSRFKDYIAVPKPNLYQSLHNTL-ISTSG---DVFEVQIRTF 323
Query: 413 EMDMLAVNGTASHAFYKGGL 432
EM A G A+H YK G+
Sbjct: 324 EMHRTAEYGIAAHWKYKAGV 343
>gi|226942443|ref|YP_002797516.1| guanosine 3,5-bis-pyrophosphate (ppGpp) synthetase, RelA/SpoT
protein [Azotobacter vinelandii DJ]
gi|226717370|gb|ACO76541.1| guanosine 3,5-bis-pyrophosphate (ppGpp) synthetase, RelA/SpoT
protein [Azotobacter vinelandii DJ]
Length = 702
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 170/335 (50%), Gaps = 25/335 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G+ + + ++ G A L+ V
Sbjct: 46 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIPKEALVEQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+K + + A +K + DIR +++ LA RL MR LD +P + I+ E
Sbjct: 103 LTQMKFENKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLDAMPYEKSRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ + P + +R K ++ ++ L+
Sbjct: 163 LEIYAPIANRLGMHSMRVEFEDLGFKAMHPMRSARIRQAVRRARGNRKEIVTKIEQSLVA 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL+ + D V+GR K YS KK+ + E+ DV R+++ + V+T
Sbjct: 223 CLEREGL------DGDVKGREKHLYSIYKKMRGKRKAFNEIMDVYAFRIVV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKA 443
IRT EM+ LA NG A+H YK G +P + +A
Sbjct: 322 IRTREMEELANNGIAAHWLYKSGDEDPIKGNHARA 356
>gi|345891626|ref|ZP_08842465.1| hypothetical protein HMPREF1022_01125 [Desulfovibrio sp.
6_1_46AFAA]
gi|345048010|gb|EGW51857.1| hypothetical protein HMPREF1022_01125 [Desulfovibrio sp.
6_1_46AFAA]
Length = 719
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 166/325 (51%), Gaps = 33/325 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L+ L+VA LA++ D ++AGLL VE +I+++ + G A ++ ++
Sbjct: 46 LSHPLAVADTLAEMGFDEPTVAAGLLHDTVEDTKATIEEIDENFGEEVADIVDGVTKISM 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + ++ A +RK L +D+R L++ LA R M LD+ ++Q I+ E
Sbjct: 106 ---IPFENKEEAQAENIRKMILAMSHDMRVLMVKLADRQHNMSTLDFQKAHKQKRIAQET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M I+APLA+ + L LEDLSF+YL P + +D WL H+ K +ID
Sbjct: 163 MDIYAPLANRLGLYMLKRNLEDLSFKYLRPDVFNQIDHWLDKHQVVEKHIID-------- 214
Query: 289 CLKTDATLADLVEDVSVQ----GRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSN 344
K + DL+ +Q GR K +YS KK+ +E++D++ RV++K +
Sbjct: 215 --KVVGLIRDLLASNHIQGQVYGRIKHKYSIYKKMQSQSLTLDEMHDIMAFRVLVKDIKD 272
Query: 345 LVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPL 404
CY ++ S W+ + R KDYI+ PKANGY+SLH V + G+
Sbjct: 273 -----------CYAVLGLVHSQWRPVHGRFKDYISMPKANGYQSLHTTV-IGPEGER--- 317
Query: 405 MEIQIRTEEMDMLAVNGTASHAFYK 429
+EIQIRTE+M A +G A+H YK
Sbjct: 318 IEIQIRTEDMHRQAEHGVAAHWLYK 342
>gi|329769877|ref|ZP_08261276.1| hypothetical protein HMPREF0433_01040 [Gemella sanguinis M325]
gi|328837931|gb|EGF87555.1| hypothetical protein HMPREF0433_01040 [Gemella sanguinis M325]
Length = 725
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 165/319 (51%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L +L++D I AG L VVE +++ +R+R G A ++ ++ +
Sbjct: 55 IQVAGILTELKLDYATICAGFLHDVVEDTKYTLEDIRERFGDDIAVIVDGVTKLDK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + A RK F D+R + + LA RL MR + Y+ +Q I+ E ++I+
Sbjct: 112 KFRSKKQSQAENHRKLFVSIAKDLRVIFVKLADRLHNMRTMKYMREEKQREIASETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED S RYL P Y + ++ + + I KE C
Sbjct: 172 APLAHRLGISSVKWELEDTSLRYLHPAQYFSIVGMMKQKRSAREESI---KE---ACESI 225
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ L + V GR K YS KK++K + +++ D+L +RV++ ++
Sbjct: 226 TSLLGEHNIKAQVNGRPKHIYSIYKKMVKQNKTFDQIYDLLAVRVLVDSVAD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY T ++ +LW +P R KDYIA PK N Y+SLH V ++ +G+T +E+QIRT
Sbjct: 278 ---CYATLGLVNNLWVPIPGRIKDYIAMPKPNMYQSLHTTV-IAPDGQT---LEVQIRTY 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 331 EMHEIAEKGIAAHWAYKEG 349
>gi|335428878|ref|ZP_08555788.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Haloplasma
contractile SSD-17B]
gi|335429314|ref|ZP_08556213.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Haloplasma
contractile SSD-17B]
gi|334890012|gb|EGM28294.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Haloplasma
contractile SSD-17B]
gi|334891819|gb|EGM30065.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Haloplasma
contractile SSD-17B]
Length = 727
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/320 (32%), Positives = 167/320 (52%), Gaps = 31/320 (9%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ V+L+L + I+AGL+ V+E V+ +++ D G L+ ++
Sbjct: 55 IEVSLILTSFHAGPKTIAAGLMHDVLEDTEVTEEEMADLFGNEITTLVDGVTKLG----- 109
Query: 174 KLQVLDDETAAA---LRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMK 230
+++ + E A A + F DIR +I+ LA RL MR L ++PR++Q+ IS E +
Sbjct: 110 QIKYVSKEQAQAKNHQKMFLAMAKDIRVIIIKLADRLHNMRTLKHMPRHKQVRISKETLG 169
Query: 231 IHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCL 290
I AP+AH + L ELED R++ P Y ++ + + + + + ID ++ CL
Sbjct: 170 IFAPIAHRLGMYRLKSELEDRCLRFIDPEEYYYIASLINTKQREREDDIDSIINEIKGCL 229
Query: 291 K-TDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTS 349
K D A ++GR K+ +S KK+ + + E+ D+L LR+I+
Sbjct: 230 KEQDIKFA-------IKGRIKNIFSVHKKMREKNKEFSEIFDLLALRIIVD--------- 273
Query: 350 EVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQI 409
E +CY +I S WK +P R KDYIA PK N Y+SLH + ++ NGK + E+QI
Sbjct: 274 --DEASCYQVLGLIHSNWKPIPKRFKDYIAMPKPNMYQSLHTTI-IALNGK---IFEVQI 327
Query: 410 RTEEMDMLAVNGTASHAFYK 429
RT EMD++A G A+H YK
Sbjct: 328 RTNEMDLVAEYGVAAHWAYK 347
>gi|297623247|ref|YP_003704681.1| (p)ppGpp synthetase I SpoT/RelA [Truepera radiovictrix DSM 17093]
gi|297164427|gb|ADI14138.1| (p)ppGpp synthetase I, SpoT/RelA [Truepera radiovictrix DSM 17093]
Length = 729
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 172/333 (51%), Gaps = 18/333 (5%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++V LLA++ +D + + AGLL VE V+ +++ R G ++ ++
Sbjct: 45 ITHPVAVTELLAEMHLDVDALIAGLLHDTVEDTDVTFEEIEARFGAPVRRIVEGETKISK 104
Query: 170 NVNLKLQVLDDETAAA----LRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMI 224
LK++ L+ LR+ L D+R +++ LA RL MR L ++P +Q I
Sbjct: 105 ---LKIRQLEAGAEEEQAENLRQMLLAMVGDVRIILVKLADRLHNMRTLRHMPPEKQRRI 161
Query: 225 SLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKE 284
+ E ++I APLAH + N++ ELE+L F YL P Y + +R + Y +
Sbjct: 162 ARETLEIFAPLAHRLGINHIKSELEELGFFYLEPERYRALQRQVRMRRAER----EAYVQ 217
Query: 285 QLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSN 344
+ + L+ L ++S GR K YS +K+ +D + +++ D++ +R I+ P+
Sbjct: 218 RSIALLEERLAQEGLTFEIS--GRSKGLYSVYRKMQRDAKNLDQIFDLMAIRAILTPTGG 275
Query: 345 LVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPL 404
+ + + CY II S+W +P R KDY+A PK NGY+SLH V + G+
Sbjct: 276 GESVEDEEKAICYRALGIIHSIWTPIPGRFKDYVAVPKPNGYQSLHTTV-IGLQGQP--- 331
Query: 405 MEIQIRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
+E+QIRT M +A G A+H YK G +P +
Sbjct: 332 IEVQIRTRRMHEIAEYGVAAHWAYKQGFGDPSQ 364
>gi|312864064|ref|ZP_07724300.1| GTP diphosphokinase [Streptococcus vestibularis F0396]
gi|311100477|gb|EFQ58684.1| GTP diphosphokinase [Streptococcus vestibularis F0396]
Length = 739
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 188/364 (51%), Gaps = 28/364 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL +DA ++ G L VVE ++ + G +++ ++ +
Sbjct: 55 IQVAGILADLHLDAVTVACGFLHDVVEDTEKTLDDLEADFGTDVRNIVDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E M+I+
Sbjct: 112 EYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED+SFRYL + + ++ + L+D +++ +KT
Sbjct: 172 APLAHRLGISRIKWELEDMSFRYLNEVEFYKISHMMKEKRREREALVD----EIVDKIKT 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
LV D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 228 YTAEQGLVGD--VYGRPKHIYSIFRKMRDKKKRFDQIYDLIAIRCVMETHSDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PK+NGY+S+H V G P+ EIQIRT+
Sbjct: 279 ----YAMLGYIHELWRPMPGRFKDYIANPKSNGYQSIHTTV----YGPKGPI-EIQIRTK 329
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFEFDWR 472
EM +A G A+H YK G+ + ++K M +L + L+D + + KGF +
Sbjct: 330 EMHQVAEYGVAAHWAYKKGIKSKVDSKESALGMNWIKDL--VELQDASNGDAKGFVDSVK 387
Query: 473 DRVF 476
+ +F
Sbjct: 388 EDIF 391
>gi|397906545|ref|ZP_10507345.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Caloramator
australicus RC3]
gi|397160502|emb|CCJ34682.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Caloramator
australicus RC3]
Length = 722
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 166/324 (51%), Gaps = 25/324 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA++L ++ +D + I A LL VVE +S + V+ A L+ ++ +
Sbjct: 48 VEVAIILVEMGLDTDAICAALLHDVVEDTHLSYEDVKREFNESIADLVDGVTKLGK---I 104
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A +RK + DIR +++ LA RL MR L YLP +Q + E + I+
Sbjct: 105 EYKSKEEQQAENIRKVLIAMAKDIRVILIKLADRLHNMRTLKYLPPEKQKAKAEETLDIY 164
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELEDLS RYL P Y + + ++ + I+ K L + L+
Sbjct: 165 APLAHRLGISKIKWELEDLSLRYLHPDEYYELVSKVQKKRAEREKEINEIKNILQEKLEQ 224
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
AD + GR K YS +K+ + +++ D+L +RVI+ +
Sbjct: 225 AGIKAD------IDGRPKHFYSIYRKMHYKNKTFDQIFDLLAVRVIVDTVKD-------- 270
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I+ +LWK +P R KDYIA PK N Y+SLH V + NG+ EIQIRT
Sbjct: 271 ---CYAALGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHSTV-IGPNGQP---FEIQIRTW 323
Query: 413 EMDMLAVNGTASHAFYKGGLTNPE 436
EM A G A+H YK G+ N E
Sbjct: 324 EMHRTAEYGIAAHWKYKEGINNKE 347
>gi|138896146|ref|YP_001126599.1| ppGpp synthetase/hydrolase Rel [Geobacillus thermodenitrificans
NG80-2]
gi|134267659|gb|ABO67854.1| ppGpp synthetase/hydrolase Rel [Geobacillus thermodenitrificans
NG80-2]
Length = 732
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 166/321 (51%), Gaps = 25/321 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL+MDA I+AG L VVE + + + G A L+ ++ +
Sbjct: 55 IQVAGILADLKMDATTIAAGFLHDVVEDTEATKEDLEREFGADVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP +Q I+ E ++I
Sbjct: 112 KYKSQEEQQAENHRKMFLAMAQDIRVILIKLADRLHNMRTLKHLPAEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ + Y E+++Q ++
Sbjct: 172 APLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAEREQ----YLEEVIQEVRE 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
L ++ + GR K YS +K++ + E+ D+L +R+I+ +
Sbjct: 228 --RLNEVHIPCEISGRPKHIYSIYRKMVMQNKQFNEIYDLLAVRIIVNSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PK N Y+SLH V + G+ PL E+QIRT
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGE--PL-EVQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGGLT 433
EM +A G A+H YK G T
Sbjct: 331 EMHQIAEFGIAAHWAYKEGKT 351
>gi|196250100|ref|ZP_03148794.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. G11MC16]
gi|196210284|gb|EDY05049.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. G11MC16]
Length = 732
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 166/321 (51%), Gaps = 25/321 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL+MDA I+AG L VVE + + + G A L+ ++ +
Sbjct: 55 IQVAGILADLKMDATTIAAGFLHDVVEDTEATKEDLEREFGADVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP +Q I+ E ++I
Sbjct: 112 KYKSQEEQQAENHRKMFLAMAQDIRVILIKLADRLHNMRTLKHLPAEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ + Y E+++Q ++
Sbjct: 172 APLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAEREQ----YLEEVIQEVRE 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
L ++ + GR K YS +K++ + E+ D+L +R+I+ +
Sbjct: 228 --RLNEVHIPCEISGRPKHIYSIYRKMVMQNKQFNEIYDLLAVRIIVNSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PK N Y+SLH V + G+ PL E+QIRT
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGE--PL-EVQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGGLT 433
EM +A G A+H YK G T
Sbjct: 331 EMHQIAEFGIAAHWAYKEGKT 351
>gi|417002340|ref|ZP_11941729.1| GTP diphosphokinase [Anaerococcus prevotii ACS-065-V-Col13]
gi|325479481|gb|EGC82577.1| GTP diphosphokinase [Anaerococcus prevotii ACS-065-V-Col13]
Length = 726
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 108/321 (33%), Positives = 168/321 (52%), Gaps = 33/321 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
++VA L+++++D + I AGL+ V+E V+ Q+ + G L+ ++KN L
Sbjct: 55 IAVAKKLSEMKLDDQTICAGLMHDVLEDTDVTRDQMAEVFGEEITFLVDGVTKLKN---L 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+++ A +RK + D+R +++ L+ RL MR L+Y+ R +Q+ I+ E ++I+
Sbjct: 112 NYTSREEKQAENIRKMVMAMSNDVRVVLIKLSDRLHNMRTLEYMTRKKQIQIADETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYL----FVDTWLRSHETGSKPLIDIYKEQLLQ 288
PLAH + L +ELEDL FRY P Y V+ R E Y ++++
Sbjct: 172 VPLAHRLGIYSLKWELEDLCFRYQEPEKYYELAEMVNVKRREREA--------YINEIIE 223
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L D+ + + GR KS YS KK+ ++G EE+ D+ +RV LV+T
Sbjct: 224 SLSKSLEGTDI--NFEISGRPKSLYSINKKMQRNGIAFEEIYDLTAVRV-------LVDT 274
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
+ E CY + SLW+ +P+R KDYI +PK NGYRSLH V D +RP E+Q
Sbjct: 275 --IAE--CYAVLGKVHSLWRPIPNRIKDYIGQPKPNGYRSLHTTVFGDD---SRPF-EVQ 326
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT M G A+H YK
Sbjct: 327 IRTRTMHKECEYGVAAHWRYK 347
>gi|322517601|ref|ZP_08070469.1| GTP diphosphokinase [Streptococcus vestibularis ATCC 49124]
gi|322123766|gb|EFX95344.1| GTP diphosphokinase [Streptococcus vestibularis ATCC 49124]
Length = 739
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 188/364 (51%), Gaps = 28/364 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL +DA ++ G L VVE ++ + G +++ ++ +
Sbjct: 55 IQVAGILADLHLDAVTVACGFLHDVVEDTEKTLDDLEADFGTDVRNIVDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E M+I+
Sbjct: 112 EYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED+SFRYL + + ++ + L+D +++ +KT
Sbjct: 172 APLAHRLGISRIKWELEDMSFRYLNEVEFYKISHMMKEKRREREALVD----EIVDKIKT 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
LV D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 228 YTAEQGLVGD--VYGRPKHIYSIFRKMRDKKKRFDQIYDLIAIRCVMETHSDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PK+NGY+S+H V G P+ EIQIRT+
Sbjct: 279 ----YAMLGYIHELWRPMPGRFKDYIANPKSNGYQSIHTTV----YGPKGPI-EIQIRTK 329
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFEFDWR 472
EM +A G A+H YK G+ + ++K M +L + L+D + + KGF +
Sbjct: 330 EMHQVAEYGVAAHWAYKKGIKSKVDSKESALGMNWIKDL--VELQDASNGDAKGFVDSVK 387
Query: 473 DRVF 476
+ +F
Sbjct: 388 EDIF 391
>gi|291460900|ref|ZP_06600232.1| GTP diphosphokinase [Fusobacterium periodonticum ATCC 33693]
gi|291380153|gb|EFE87671.1| GTP diphosphokinase [Fusobacterium periodonticum ATCC 33693]
Length = 515
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 171/320 (53%), Gaps = 33/320 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L +++MD + + AGLL VVE + I ++ G A L+ + V
Sbjct: 51 VEVAKILMEMKMDTDTVVAGLLHDVVEDTLIPIADIKYNFGDTVAVLV-------DGVT- 102
Query: 174 KLQVLDDET---AAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVM 229
KL+ L + T A +RK L +IR +++ LA RL MR L ++ +Q IS E +
Sbjct: 103 KLKALPNGTKNQAENIRKMILAMAENIRVILIKLADRLHNMRTLKFMKPEKQQAISKETL 162
Query: 230 KIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQC 289
I+APLAH + + ELEDLSF YL YL + + + + K ID ++
Sbjct: 163 DIYAPLAHRLGMAKIKSELEDLSFSYLHHEEYLEIKRLVENTKEERKDYID----NFIRT 218
Query: 290 LKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTS 349
+K TL DL V+GR+K YS KK+ + G+ +++ D++G+RVI++ +
Sbjct: 219 MKR--TLVDLGLKAEVKGRFKHFYSIYKKMYQKGKEFDDIYDLMGVRVIVEDKA------ 270
Query: 350 EVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQI 409
ACY I+ S + +P R KDYIA PK+N Y+S+H + V GK +EIQI
Sbjct: 271 -----ACYHILGIVHSQYTPVPGRFKDYIAVPKSNNYQSIHTTI-VGPLGK---FIEIQI 321
Query: 410 RTEEMDMLAVNGTASHAFYK 429
RT++MD +A G A+H YK
Sbjct: 322 RTKDMDDIAEEGIAAHWNYK 341
>gi|365902672|ref|ZP_09440495.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus malefermentans KCTC 3548]
Length = 718
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 114/325 (35%), Positives = 165/325 (50%), Gaps = 25/325 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD +SAG L VVE G ++ V++ G A ++ ++ +
Sbjct: 28 IQVAGILAELRMDPATVSAGFLHDVVEDTGATLSDVKELFGEDIAMIVDGVTKLGK---I 84
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + ++ A RK L DIR +I+ LA RL MR L++L +Q I+ E ++I+
Sbjct: 85 KYKSNREQLAENHRKLLLAMSNDIRVMIVKLADRLHNMRTLEHLRPDKQRRIANETLEIY 144
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + + +ELED+S RYL P Y + + S + I L
Sbjct: 145 APLADRLGISTIKWELEDISLRYLNPQQYYRIVHLMNSRRDQREAYI------ALAIGDI 198
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ADL V + GR K YS +K+ + ++ D+L +RVI+ +
Sbjct: 199 KDAIADLNMKVDIYGRPKHIYSIYRKMKDQHKQFSQIYDLLAIRVIVDSIKD-------- 250
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I S WK MP R KDYIA PKAN Y+SLH V + GK PL E+QIRTE
Sbjct: 251 ---CYAVLGAIHSKWKPMPGRFKDYIAMPKANMYQSLHTTV-IGPEGK--PL-EVQIRTE 303
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEE 437
+M +A G A+H YK G T E
Sbjct: 304 QMHQVAEFGVAAHWAYKEGQTGKVE 328
>gi|433444159|ref|ZP_20409169.1| GTP pyrophosphokinase [Anoxybacillus flavithermus TNO-09.006]
gi|432001807|gb|ELK22676.1| GTP pyrophosphokinase [Anoxybacillus flavithermus TNO-09.006]
Length = 732
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 110/321 (34%), Positives = 167/321 (52%), Gaps = 25/321 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL+MD I+AG L VVE V+ + + G A L+ ++ +
Sbjct: 55 IQVAGILVDLEMDPATIAAGFLHDVVEDTHVTKEDLEREFGKEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP +Q I+ E ++I
Sbjct: 112 KYKSHEEQQAENHRKMFLAMAQDIRVILIKLADRLHNMRTLKHLPIEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ + Y E+++Q ++
Sbjct: 172 APLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAEREQ----YLEEVIQEMR- 226
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
A L ++ + GR K YS +K++ + E+ D+L +R+I++ +
Sbjct: 227 -ARLQEVGIQAEISGRPKHIYSIYRKMVLQNKQFNEIYDLLAVRIIVESIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PK N Y+SLH V V G+ PL E+QIRT
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV-VGPKGE--PL-EVQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGGLT 433
EM +A G A+H YK G T
Sbjct: 331 EMHHIAEFGIAAHWAYKEGKT 351
>gi|418635800|ref|ZP_13198160.1| GTP diphosphokinase [Staphylococcus lugdunensis VCU139]
gi|374841502|gb|EHS04973.1| GTP diphosphokinase [Staphylococcus lugdunensis VCU139]
Length = 729
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 123/396 (31%), Positives = 193/396 (48%), Gaps = 47/396 (11%)
Query: 76 NVLSSSSSRLLFKALKLSIP-----MLQSLPLSPDSRSP---------LTKALSVALLLA 121
N S+ +LFKA P +L+S L+ ++ + + VA +L
Sbjct: 3 NEYPYSADEVLFKAKSYLSPDDYQYVLKSYHLAYEAHQGQFRKNGLPYIMHPIQVAGILT 62
Query: 122 DLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDE 181
++++D I AG L V+E + V++ A ++ ++K +K + +++
Sbjct: 63 EMRLDGPTIVAGFLHDVIEDTAYTFDDVKEMFNEEIARIVDGVTKLKK---VKYRSKEEQ 119
Query: 182 TAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVA 240
A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+APLA +
Sbjct: 120 QAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPRDKQIRISKETLEIYAPLADRLG 179
Query: 241 TNYLSFELEDLSFRYLFPFSYLFVDTWLRS----HETGSKPLIDIYKEQLLQCLKTDATL 296
N + +ELED S RY+ Y + ++ E K ID+ DA +
Sbjct: 180 INTIKWELEDTSLRYIDSVQYFRIVNLMKKKRSEREAYIKNAIDM----------IDAEM 229
Query: 297 ADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERAC 356
+ + GR K YS +K++K + +++ D+L +RVI+ N +N C
Sbjct: 230 IKMKIKGEINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV----NSIND-------C 278
Query: 357 YTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDM 416
Y ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT EM
Sbjct: 279 YAILGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTV-VGPNGD--PL-EIQIRTYEMHE 334
Query: 417 LAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELA 452
+A +G A+H YK G T E+ + + + ELA
Sbjct: 335 IAEHGVAAHWAYKEGKTVDEKTQDFQNKLNWLKELA 370
>gi|52081239|ref|YP_080030.1| GTP pyrophosphokinase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|319644794|ref|ZP_07999027.1| GTP pyrophosphokinase [Bacillus sp. BT1B_CT2]
gi|404490119|ref|YP_006714225.1| GTP pyrophosphokinase RelA [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|423683219|ref|ZP_17658058.1| GTP pyrophosphokinase [Bacillus licheniformis WX-02]
gi|52004450|gb|AAU24392.1| GTP pyrophosphokinase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52349121|gb|AAU41755.1| GTP pyrophosphokinase RelA [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317392603|gb|EFV73397.1| GTP pyrophosphokinase [Bacillus sp. BT1B_CT2]
gi|383439993|gb|EID47768.1| GTP pyrophosphokinase [Bacillus licheniformis WX-02]
Length = 733
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 110/326 (33%), Positives = 170/326 (52%), Gaps = 25/326 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL+MD I+ G L VVE V+++ +++ A L+ ++ +
Sbjct: 55 IQVAGILVDLEMDPATIAGGFLHDVVEDTSVTLEDLKEAFNEEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP+ +Q IS E ++I
Sbjct: 112 KYKSQEEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ ++Y E+++ +K+
Sbjct: 172 APLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAER----ELYVEEVVNEVKS 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
++ D S GR K YS +K+ + E+ D+L +R+ LVN+
Sbjct: 228 RVEEVNIKADFS--GRPKHIYSIYRKMAMQNKQFNEIYDLLAVRI-------LVNSI--- 275
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY II + WK MP R KDYIA PK N Y+SLH V + G PL E+QIRT
Sbjct: 276 -KDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGD--PL-EVQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEA 438
EM +A G A+H YK G E++
Sbjct: 331 EMHEIAEYGIAAHWAYKEGKNANEDS 356
>gi|404417935|ref|ZP_10999717.1| GTP pyrophosphokinase [Staphylococcus arlettae CVD059]
gi|403489651|gb|EJY95214.1| GTP pyrophosphokinase [Staphylococcus arlettae CVD059]
Length = 678
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 108/340 (31%), Positives = 177/340 (52%), Gaps = 25/340 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++ +D I AG L V+E + V+ A ++ ++K +
Sbjct: 4 IQVAGILTEMHLDGPTIVAGFLHDVIEDTPYTFDDVKAMFNEEVAMIVEGVTKLKK---V 60
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR + +PR +Q+ IS E ++I+
Sbjct: 61 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTIKPMPRDKQIRISKETLEIY 120
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + Y + + +++
Sbjct: 121 APLAHRLGINTIKWELEDTALRYIDSVQYFRIVNLMKKKRSEREA----YIQNAIDQIQS 176
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ + +V D++ GR K YS +K++K + +++ D+L +RVI+ N +N
Sbjct: 177 EMSAMSIVGDIN--GRPKHIYSIYRKMVKQKKQFDQIFDLLAIRVIV----NSIND---- 226
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 227 ---CYAILGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTV-VGPNGD--PL-EIQIRTF 279
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELA 452
EM +A +G A+H YK G E+ + + ELA
Sbjct: 280 EMHEIAEHGVAAHWAYKEGKQVTEKTEDFHNKLNWLKELA 319
>gi|86740082|ref|YP_480482.1| (p)ppGpp synthetase I [Frankia sp. CcI3]
gi|86566944|gb|ABD10753.1| (p)ppGpp synthetase I [Frankia sp. CcI3]
Length = 862
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 169/321 (52%), Gaps = 27/321 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++VA +LADL MD +SA LL +E +++ +RD G A L+ +++ N
Sbjct: 167 ITHPIAVASILADLGMDTATLSAALLHDTLEETTLTVDAIRDTFGDHIA-LIVDAVSKLN 225
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
V +V + A +R+ + D RAL++ LA RL MR L +LP ++Q + E
Sbjct: 226 RV----KVGEAAQAETIRRMVVAMARDPRALVVKLADRLHNMRTLRFLPEHKQERKARET 281
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++++APLAH + N L +ELEDLSF L+P Y D +R P D+Y +++
Sbjct: 282 LEVYAPLAHRLGMNSLKWELEDLSFAALYPKRY---DEIVRL-VADRAPSRDVYLAEVIG 337
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
++ L D V GR K YS +K++ GR +++ D++G+RV++
Sbjct: 338 QVQVG--LRDARIKAVVSGRPKHYYSIYQKMVVRGRSFDDIYDLVGIRVLVD-------- 387
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY T + + WK +P R KDYIA PK N Y+SLH V + GK +E+Q
Sbjct: 388 ---SVRDCYATLGTVHATWKPIPGRFKDYIAMPKFNMYQSLHTTV-IGPEGKP---VELQ 440
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT M A G A+H YK
Sbjct: 441 IRTHAMHNRAEYGIAAHWKYK 461
>gi|402301240|ref|ZP_10820621.1| GTP pyrophosphokinase [Bacillus alcalophilus ATCC 27647]
gi|401723656|gb|EJS97105.1| GTP pyrophosphokinase [Bacillus alcalophilus ATCC 27647]
Length = 728
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 165/319 (51%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA ++ +LQ+D ++A L VVE VSI+ + + A L+ V
Sbjct: 49 IQVAGIIIELQLDPNTVAAAFLHDVVEDTDVSIEDIEEEFNGQVAMLVD---GVTKLKKF 105
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK + DIR +++ LA RL MR L Y+P +Q + S E ++I
Sbjct: 106 KYKSKEEQQAENHRKMLIAMAKDIRVIMIKLADRLHNMRTLKYMPPEKQRVTSNETLEIF 165
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ + + E++
Sbjct: 166 APLAHRLGISTIKWELEDTALRYLDPQQYYRIVNLMKKKRAEREEYLSDVMERI------ 219
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
D L D+ + GR K YS +K++ + E+ D+L +R+I++ N+
Sbjct: 220 DGDLKDVFIGAEISGRPKHIYSIYRKMVLQNKQFNEIYDLLAVRIIVQ---NI------- 269
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY +I +LWK MP R KDYIA PKAN Y+SLH V V +G PL E+QIRTE
Sbjct: 270 -KDCYAVLGVIHTLWKPMPGRFKDYIAMPKANMYQSLHTTV-VGPHGD--PL-EVQIRTE 324
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 325 EMHRVAEFGVAAHWAYKEG 343
>gi|30143060|gb|AAP15447.1| RelA/SpoT [Staphylococcus aureus subsp. aureus]
Length = 438
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V++ A ++ ++K +
Sbjct: 62 IQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKEMFNEEVARIVDGVTKLKK---V 118
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 119 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIY 178
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I E + ++T
Sbjct: 179 APLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYI----ETAIDRIRT 234
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ D++ GR K YS +K++K + +++ D+L +RVI+ N +N
Sbjct: 235 EMDRMNIEGDIN--GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV----NSIND---- 284
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 285 ---CYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV-VGPNGD--PL-EIQIRTF 337
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A +G A+H YK G
Sbjct: 338 DMHEIAEHGVAAHWAYKEG 356
>gi|256752957|ref|ZP_05493784.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter ethanolicus
CCSD1]
gi|256748165|gb|EEU61242.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter ethanolicus
CCSD1]
Length = 493
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 114/331 (34%), Positives = 174/331 (52%), Gaps = 37/331 (11%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L++D I+AGLL V+E V+ Q+ + G A L+ ++ +
Sbjct: 49 IEVAYILAELELDITTIAAGLLHDVIEDTDVTYGQLLEYFGKEIADLVDGVTKL-GKIEY 107
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K +V ++ A +RK + DIR +++ LA RL MR L YLP +Q + E ++I+
Sbjct: 108 KSKV--EQQAENMRKMLIAMAKDIRVILIKLADRLHNMRTLKYLPLDKQKEKAEETLEIY 165
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSY--LFVDTWLRSHETGSKPLIDIYKEQLLQCL 290
AP+AH + + + +ELEDL RYL P Y L + E +E+ +Q +
Sbjct: 166 APIAHRLGISKIKWELEDLCLRYLHPEEYYDLVEKVAAKRKE----------REEFIQNI 215
Query: 291 KTDATLADLVEDVSVQ----GRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLV 346
T T+ + ++++ +Q GR K YS KK+ + E++ D+L +R+I V
Sbjct: 216 IT--TIKEKLKEMGIQAEVDGRPKHFYSIYKKMKTQNKTFEQIYDLLAVRII-------V 266
Query: 347 NTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLME 406
NT + CY I+ +LWK +P R KDYIA PK N Y+SLH V + G+ E
Sbjct: 267 NTV----KDCYGVLGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTV-IGPKGEP---FE 318
Query: 407 IQIRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
IQIRT EM A G A+H YK G T +E
Sbjct: 319 IQIRTWEMHKTAEYGIAAHWKYKEGKTTEDE 349
>gi|383771398|ref|YP_005450463.1| GTP pyrophosphokinase [Bradyrhizobium sp. S23321]
gi|381359521|dbj|BAL76351.1| GTP pyrophosphokinase [Bradyrhizobium sp. S23321]
Length = 750
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 113/329 (34%), Positives = 165/329 (50%), Gaps = 25/329 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ L VA +L DL++D I A LL +E + ++ G L+ ++K
Sbjct: 70 FSHPLEVAAILTDLKLDDATIVAALLHDTIEDTEATRAEIDQIFGPEIGALVEGLTKLKR 129
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+L + + A LRK L D +R L++ LA RL MR LD++P + I+ E
Sbjct: 130 ---LELVSREAKQAENLRKLLLAIADDVRVLLVKLADRLHNMRTLDFVPTESRRRIAEET 186
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+APLA + + ELEDLSFR L P +Y V L + ++ LI ++QL
Sbjct: 187 LDIYAPLAGLMGMQEMREELEDLSFRTLDPEAYTVVMQRLDALAERNRNLIGEIEDQLSN 246
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L+ A V GR K +S K+ + E+++D+ G RV+ VN
Sbjct: 247 NLRHRGLGA------RVYGRRKKPFSIWTKMERKSIGFEQLSDIFGFRVV-------VND 293
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
E +CY I+ + W +P R KDYI+ PK N YRS+H V N + +E+Q
Sbjct: 294 IE----SCYRALGIVHTTWPVVPGRFKDYISTPKQNDYRSIHTTVIGPGNQR----VELQ 345
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
IRTEEMD +A G A+HAFYK G +P E
Sbjct: 346 IRTEEMDQIAERGIAAHAFYKEGAGSPTE 374
>gi|262051284|ref|ZP_06023508.1| GTP pyrophosphokinase [Staphylococcus aureus 930918-3]
gi|259160921|gb|EEW45941.1| GTP pyrophosphokinase [Staphylococcus aureus 930918-3]
Length = 729
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 171/319 (53%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V++ A ++ ++K +
Sbjct: 55 IQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKEMFNEEVARIVDGVTKLKK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 112 KYGSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I E + ++T
Sbjct: 172 APLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYI----ETAIDRIRT 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ D++ GR K YS +K++K + +++ D+L +RVI+ N +N
Sbjct: 228 EMDRMNIEGDIN--GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV----NSIND---- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 278 ---CYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV-VGPNGD--PL-EIQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A +G A+H YK G
Sbjct: 331 DMHEIAEHGVAAHWAYKEG 349
>gi|452975303|gb|EME75122.1| GTP pyrophosphokinase RelA [Bacillus sonorensis L12]
Length = 733
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 110/326 (33%), Positives = 170/326 (52%), Gaps = 25/326 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL+MD I+ G L VVE V+++ +++ A L+ ++ +
Sbjct: 55 IQVAGILVDLEMDPATIAGGFLHDVVEDTSVTLEDLKEAFNEEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP+ +Q IS E ++I
Sbjct: 112 KYKSQEEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ ++Y ++++ +K
Sbjct: 172 APLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAER----ELYVQEVVNEVKN 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
++ D S GR K YS +K+ + E+ D+L +R+ LVN+
Sbjct: 228 RVEEVNIKADFS--GRPKHIYSIYRKMAMQNKQFNEIYDLLAVRI-------LVNSI--- 275
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY II + WK MP R KDYIA PK N Y+SLH V + G PL E+QIRT
Sbjct: 276 -KDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGD--PL-EVQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEA 438
EM +A G A+H YK G + E+A
Sbjct: 331 EMHEIAEYGIAAHWAYKEGKSVNEDA 356
>gi|402850133|ref|ZP_10898344.1| GTP pyrophosphokinase [Rhodovulum sp. PH10]
gi|402499575|gb|EJW11276.1| GTP pyrophosphokinase [Rhodovulum sp. PH10]
Length = 766
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 163/329 (49%), Gaps = 25/329 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ L VA +L DL++D I A LL +E + + G HL+ ++K
Sbjct: 80 FSHPLEVAAILTDLKLDDSTIVAALLHDTIEDTDATRTDIDRIFGPDIGHLVEGLTKLKK 139
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+L + + A LRK L D+R L++ LA RL MR L Y+P ++ I+ E
Sbjct: 140 ---LELVSREAKQAENLRKLLLAIAEDVRVLLVKLADRLHNMRTLGYMPAEKRKRIAEET 196
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+APLA + + + ELEDLSFR L P ++ + L + LI ++QL
Sbjct: 197 IDIYAPLAARMGMHEMRSELEDLSFRVLHPDAFQVISARLDQVAAKNSDLIAEIEQQLT- 255
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
A LA + SV GR K YS +K+ + E+++D+ G R I+ ++
Sbjct: 256 -----AKLAGRGIEASVTGRRKHAYSVWRKMERKALGFEQLSDIYGFRAIVATVAD---- 306
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY ++ + W +P R KDY++ PK N YRS+H V N + +E+Q
Sbjct: 307 -------CYAALGVVHTTWPLVPGRFKDYVSTPKQNDYRSIHTTVIGPRNQR----VELQ 355
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
IRT EMD +A G A+HA YK L +P E
Sbjct: 356 IRTHEMDEIAEYGIAAHALYKDDLGSPSE 384
>gi|366053217|ref|ZP_09450939.1| (p)ppGpp synthetase I SpoT/RelA [Lactobacillus suebicus KCTC 3549]
Length = 728
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 111/322 (34%), Positives = 163/322 (50%), Gaps = 23/322 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA L MD E + AG L +VE GV ++ VR+ G A ++ ++ +
Sbjct: 36 VQVAGILAKLHMDPETVVAGYLHDIVEDTGVVLEDVRELFGPEVAMIVDGDTKLSK---I 92
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + ++ A RK L DIR +I+ LA RL MR L +L +Q I+ E ++I+
Sbjct: 93 KYKSNKEQMAENHRKLLLAMSKDIRVMIVKLADRLHNMRTLQHLRPDKQRRIANETLEIY 152
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+A + + + +ELEDLS RYL P Y + + S I+ + + +K
Sbjct: 153 APIADRLGISTIKWELEDLSLRYLNPQQYYRIVHLMNSRRDQRIEYINRAIDDIKDAIKD 212
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
DL + GR K YS +K++ + ++ D+L +RV+++ +
Sbjct: 213 ----LDLGNGTEIYGRPKHIYSIYRKMVTKHKQFSQIYDLLAIRVVVESIKD-------- 260
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + W MP R KDYIA PK NGY+SLH V V G RPL E+QIRT
Sbjct: 261 ---CYAVLGAIHTSWTPMPGRFKDYIAMPKVNGYQSLHTTV-VGPEG--RPL-EVQIRTH 313
Query: 413 EMDMLAVNGTASHAFYKGGLTN 434
EM +A G A+H YK G TN
Sbjct: 314 EMHEVAELGVAAHWAYKEGRTN 335
>gi|430003007|emb|CCF18790.1| GTP pyrophosphohydrolase/synthetase, RelA/SpoT family [Rhizobium
sp.]
Length = 737
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 119/370 (32%), Positives = 182/370 (49%), Gaps = 27/370 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ L VA +L D+ +D I+ LL +E + ++ + G L+ ++K
Sbjct: 46 ISHPLEVAAILTDMHLDESTIAVALLHDTIEDTTATRAEIDELFGEDIGRLVEGLTKLKR 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L L + A LRK L D +R L++ LA RL MR L+++ ++ IS E
Sbjct: 106 ---LDLVTKKAKQAENLRKLLLAISDDVRVLLVKLADRLHNMRTLEHMNPEKRARISEET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M I+APLA + + ELEDLSFRYL P +Y V L T ++ LI +++L
Sbjct: 163 MDIYAPLAGRMGMQDVRDELEDLSFRYLNPEAYETVTNRLAELSTRNEGLISKIEDEL-- 220
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
D +A+ + D V+GR K YS +K+ E+++DV G R+++
Sbjct: 221 ---RDLLVANGLTDAVVKGRQKKPYSVFRKMQSKSLSFEQLSDVYGFRILV--------- 268
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
S++ ACY I+ + W+ +P R KDYI+ PK N YRS+H + G +R +E+Q
Sbjct: 269 SDIP--ACYRALGIVHTRWRVVPGRFKDYISTPKQNDYRSIHTTI----VGPSRQRIELQ 322
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPST--NHKG 466
IRT M +A G A+HA YK G N +K A + AL D P H
Sbjct: 323 IRTRRMHEIAEYGIAAHALYKDGGANELLSKESNAYSWLRHTIEALSEGDNPEEFLEHTK 382
Query: 467 FEFDWRDRVF 476
E ++D+VF
Sbjct: 383 LEL-FQDQVF 391
>gi|212638570|ref|YP_002315090.1| GTP pyrophosphokinase [Anoxybacillus flavithermus WK1]
gi|212560050|gb|ACJ33105.1| GTP pyrophosphokinase (ppGpp synthetase) [Anoxybacillus
flavithermus WK1]
Length = 732
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 110/321 (34%), Positives = 167/321 (52%), Gaps = 25/321 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL+MD I+AG L VVE V+ + + G A L+ ++ +
Sbjct: 55 IQVAGILVDLEMDPATIAAGFLHDVVEDTHVTKEDLEREFGKEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP +Q I+ E ++I
Sbjct: 112 KYKSHEEQQAENHRKMFLAMAQDIRVILIKLADRLHNMRTLKHLPIEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ + Y E+++Q ++
Sbjct: 172 APLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAEREQ----YLEEVIQEMR- 226
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
A L ++ + GR K YS +K++ + E+ D+L +R+I++ +
Sbjct: 227 -ARLLEVGIQAEISGRPKHIYSIYRKMVLQNKQFNEIYDLLAVRIIVESIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PK N Y+SLH V V G+ PL E+QIRT
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV-VGPKGE--PL-EVQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGGLT 433
EM +A G A+H YK G T
Sbjct: 331 EMHHIAEFGIAAHWAYKEGKT 351
>gi|410456899|ref|ZP_11310748.1| GTP pyrophosphokinase [Bacillus bataviensis LMG 21833]
gi|409927039|gb|EKN64186.1| GTP pyrophosphokinase [Bacillus bataviensis LMG 21833]
Length = 731
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 107/323 (33%), Positives = 164/323 (50%), Gaps = 29/323 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL+MD ++AG L VVE +S++ + + A L+ ++
Sbjct: 55 IQVAGILADLEMDPATVAAGFLHDVVEDTNISLKDIEEAFNDEVAMLVDGVTKLGK---F 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP +Q IS E ++I
Sbjct: 112 KYKSHEEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPVEKQRRISNETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ--CL 290
APLAH + + + +ELED + RYL P Y + ++ +EQ L+ +
Sbjct: 172 APLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAE--------REQYLEDVIV 223
Query: 291 KTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSE 350
+ A + ++ + GR K YS +K++ + E+ D+L +R+++ +
Sbjct: 224 EVKARMGEVSIKAELSGRPKHIYSIYRKMVLQNKQFSEIYDLLAVRIVVNSIKD------ 277
Query: 351 VGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIR 410
CY II + WK MP R KDYIA PK N Y+SLH V + G PL E+QIR
Sbjct: 278 -----CYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGD--PL-EVQIR 328
Query: 411 TEEMDMLAVNGTASHAFYKGGLT 433
T EM +A G A+H YK G T
Sbjct: 329 TYEMHRIAEFGVAAHWAYKEGKT 351
>gi|417801631|ref|ZP_12448716.1| RelA/SpoT domain protein [Staphylococcus aureus subsp. aureus
21318]
gi|334276485|gb|EGL94746.1| RelA/SpoT domain protein [Staphylococcus aureus subsp. aureus
21318]
Length = 342
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V++ A ++ ++K +
Sbjct: 46 IQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKEMFNEEVARIVDGVTKLKK---V 102
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 103 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIY 162
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + Y E + ++T
Sbjct: 163 APLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSER----EAYIETAIDRIRT 218
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ D++ GR K YS +K++K + +++ D+L +RVI+ N +N
Sbjct: 219 EMDRMNIEGDIN--GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV----NSIND---- 268
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 269 ---CYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV-VGPNGD--PL-EIQIRTF 321
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A +G A+H YK G
Sbjct: 322 DMHEIAEHGVAAHWAYKEG 340
>gi|418300586|ref|ZP_12912406.1| GTP pyrophosphohydrolase/synthetase [Agrobacterium tumefaciens
CCNWGS0286]
gi|355533324|gb|EHH02659.1| GTP pyrophosphohydrolase/synthetase [Agrobacterium tumefaciens
CCNWGS0286]
Length = 744
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 166/323 (51%), Gaps = 24/323 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ L VA +L ++ +D I+ LL +E + ++ + G L+ ++K
Sbjct: 46 ISHPLEVAAILTEMHLDESTIAVALLHDTIEDTTATRAEIDELFGEDIGRLVEGLTKLKK 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L L + A LRK L D +R L++ LA RL MR ++Y+P ++ IS E
Sbjct: 106 ---LDLVTRKAKQAENLRKLLLAISDDVRVLLVKLADRLHNMRTMEYMPADKRSRISEET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLA + + ELEDLSFRYL P +Y V L+ ET ++ LI +++L +
Sbjct: 163 MEIYAPLAGRMGMQDMRDELEDLSFRYLNPEAYETVTNRLQELETRNEGLIKKIEDELRE 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L + + +V+GR K +S +K+ E+++DV G R+++
Sbjct: 223 LLVANGLIG-----ANVKGRQKKPHSVFRKMQAKSLSFEQLSDVYGFRILVDDIP----- 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
ACY I+ + W+ +P R KDYI+ PK N YRS+H + G +R +E+Q
Sbjct: 273 ------ACYRALGIVHTRWRVVPGRFKDYISTPKQNDYRSIHTTI----VGPSRQRIELQ 322
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IRT+ M +A G A+HA YK G
Sbjct: 323 IRTKRMHEIAEFGIAAHALYKDG 345
>gi|323702158|ref|ZP_08113825.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum nigrificans DSM
574]
gi|333924436|ref|YP_004498016.1| (p)ppGpp synthetase I SpoT/RelA [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|323532845|gb|EGB22717.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum nigrificans DSM
574]
gi|333749997|gb|AEF95104.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 723
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 106/323 (32%), Positives = 173/323 (53%), Gaps = 25/323 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ L++A++LA+LQ+D + ++AGLL VVE GV++ + + G A ++ ++
Sbjct: 46 IVHPLAIAIILAELQLDIKTVAAGLLHDVVEDTGVTLADIENNFGSEVARMVDGVTKLGK 105
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+ Q ++ A LRK F DIR +++ LA RL +R L + +Q ++ E
Sbjct: 106 ---LQFQSREERQAENLRKMFLAMAKDIRVILIKLADRLHNLRTLQFQSERKQKEVAEET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ APLAH + + +ELEDLSFRY P Y L+ ++ + Y +++++
Sbjct: 163 LVFFAPLAHRLGIYKIKWELEDLSFRYKEPEQYQH----LKMQIAKTRAKREEYIQEVIR 218
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L ++ +QGR K+ YS +K+++ + +++ DV +RV LV+T
Sbjct: 219 LLAEKLNAVNI--RAEIQGRPKNLYSIYQKMVEQQKELKDIFDVQAVRV-------LVDT 269
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
+ CY I +LWK +P R KDYIA PK+N Y+SLH V + NG+ +EIQ
Sbjct: 270 V----KDCYGALGIAHTLWKPIPGRFKDYIAMPKSNMYQSLHTTV-IGPNGEP---VEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IRT +M +A G A+H YK G
Sbjct: 322 IRTWDMHRVAEYGIAAHWKYKEG 344
>gi|300914191|ref|ZP_07131507.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter sp. X561]
gi|307724574|ref|YP_003904325.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacter sp. X513]
gi|300889126|gb|EFK84272.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter sp. X561]
gi|307581635|gb|ADN55034.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter sp. X513]
Length = 719
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 114/331 (34%), Positives = 175/331 (52%), Gaps = 37/331 (11%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L++D I+AGLL V+E V+ Q+ + G A L+ ++ +
Sbjct: 49 IEVAYILAELELDITTIAAGLLHDVIEDTDVTYGQLLEYFGKEIADLVDGVTKL-GKIEY 107
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K +V ++ A +RK + DIR +++ LA RL MR L YLP +Q + E ++I+
Sbjct: 108 KSKV--EQQAENMRKMLIAMAKDIRVILIKLADRLHNMRTLKYLPLDKQKEKAEETLEIY 165
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSY--LFVDTWLRSHETGSKPLIDIYKEQLLQCL 290
AP+AH + + + +ELEDL RYL P Y L + E +E+ +Q +
Sbjct: 166 APIAHRLGISKIKWELEDLCLRYLHPDEYYDLVEKVAAKRKE----------REEFIQNI 215
Query: 291 KTDATLADLVEDVSVQ----GRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLV 346
T T+ + ++++ +Q GR K YS KK+ + E++ D+L +R+I V
Sbjct: 216 IT--TIKEKLKEMGIQAEVDGRPKHFYSIYKKMKTQNKTFEQIYDLLAVRII-------V 266
Query: 347 NTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLME 406
NT + CY I+ +LWK +P R KDYIA PK N Y+SLH V + G+ E
Sbjct: 267 NTV----KDCYGVLGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTV-IGPKGEP---FE 318
Query: 407 IQIRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
IQIRT EM A G A+H YK G T+ +E
Sbjct: 319 IQIRTWEMHKTAEYGIAAHWKYKEGKTSEDE 349
>gi|154686901|ref|YP_001422062.1| RelA [Bacillus amyloliquefaciens FZB42]
gi|375363176|ref|YP_005131215.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
CAU B946]
gi|384266310|ref|YP_005422017.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
YAU B9601-Y2]
gi|385265645|ref|ZP_10043732.1| GTP diphosphokinase [Bacillus sp. 5B6]
gi|387899344|ref|YP_006329640.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens Y2]
gi|394991954|ref|ZP_10384748.1| RelA [Bacillus sp. 916]
gi|421730833|ref|ZP_16169959.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
M27]
gi|429506052|ref|YP_007187236.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
AS43.3]
gi|451346089|ref|YP_007444720.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens IT-45]
gi|452856418|ref|YP_007498101.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus amyloliquefaciens
subsp. plantarum UCMB5036]
gi|154352752|gb|ABS74831.1| RelA [Bacillus amyloliquefaciens FZB42]
gi|371569170|emb|CCF06020.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
CAU B946]
gi|380499663|emb|CCG50701.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
YAU B9601-Y2]
gi|385150141|gb|EIF14078.1| GTP diphosphokinase [Bacillus sp. 5B6]
gi|387173454|gb|AFJ62915.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens Y2]
gi|393807166|gb|EJD68491.1| RelA [Bacillus sp. 916]
gi|407074987|gb|EKE47974.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
M27]
gi|429487642|gb|AFZ91566.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
AS43.3]
gi|449849847|gb|AGF26839.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens IT-45]
gi|452080678|emb|CCP22443.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus amyloliquefaciens
subsp. plantarum UCMB5036]
Length = 734
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 109/326 (33%), Positives = 166/326 (50%), Gaps = 25/326 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL+MD I+ G L VVE V++ +++ A L+ ++ +
Sbjct: 55 IQVAGILVDLEMDPSTIAGGFLHDVVEDTDVTLDDLKEAFSEEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP+ +Q IS E ++I
Sbjct: 112 KYKSQEEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ ++Y E+++ +K
Sbjct: 172 APLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAER----ELYVEEVVNEVKK 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
++ D S GR K YS +K+ + E+ D+L +R+++ +
Sbjct: 228 RVEEVNIKADFS--GRPKHIYSIYRKMALQNKQFNEIYDLLAVRILVGSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PK N Y+SLH V + G PL E+QIRT
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGD--PL-EVQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEA 438
EM +A G A+H YK G EEA
Sbjct: 331 EMHEIAEYGVAAHWAYKEGKAANEEA 356
>gi|114320256|ref|YP_741939.1| (p)ppGpp synthetase I SpoT/RelA [Alkalilimnicola ehrlichii MLHE-1]
gi|114226650|gb|ABI56449.1| (p)ppGpp synthetase I, SpoT/RelA [Alkalilimnicola ehrlichii MLHE-1]
Length = 735
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 119/358 (33%), Positives = 177/358 (49%), Gaps = 26/358 (7%)
Query: 78 LSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQ 137
L R+L +A +L+ +S P S ++VA +L+ L++DA ++AGLL
Sbjct: 28 LDEDDRRVLAEAWRLAEAGCKSAQ-RPTGDSYFEHGVAVATILSGLRLDAATLAAGLLHD 86
Query: 138 VVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLK---LQVLDDETAAALRKFCLTYY 194
+ ++ ++R ++G AHL+ + R+++ + E A LRK L
Sbjct: 87 LPTLDDTALGRIRKQLGDDVAHLVAGASRMQDISRFHDPGQLSGESERAEGLRKMLLAMA 146
Query: 195 -DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSF 253
D+R + + LA RL +R + LP Q I+ E I+APLA+ + L +ELEDL+F
Sbjct: 147 SDVRVVFITLAERLHDLRSIRDLPETLQQRIAQETRDIYAPLANRLGIWQLKWELEDLAF 206
Query: 254 RYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRY 313
RYL P Y V L + I+ + +L + L+ D V GR K Y
Sbjct: 207 RYLQPDVYKQVAKLLAERRLDREAYIERVRRELQEALRQAGI------DAEVVGRPKHIY 260
Query: 314 STMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHR 373
S +K+ + G EE+ D+ LRV+++ +VG CY ++ SLWK +P
Sbjct: 261 SIWRKMQRKGLRFEELYDLRALRVLVE---------DVG--TCYAVLGVVHSLWKHIPKE 309
Query: 374 TKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGG 431
DYIA PK N YRSLH AV V GKT +E+QIRT M A G A+H YK G
Sbjct: 310 FDDYIATPKENNYRSLHTAV-VGPEGKT---LEVQIRTYAMHQEAELGIAAHWRYKEG 363
>gi|229163355|ref|ZP_04291307.1| GTP pyrophosphokinase [Bacillus cereus R309803]
gi|228620136|gb|EEK77010.1| GTP pyrophosphokinase [Bacillus cereus R309803]
Length = 727
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 160/319 (50%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD +SAG L VVE V+++ + A L+ ++ +
Sbjct: 55 IQVAGILVDLHMDPATVSAGFLHDVVEDTEVTLEDIEREFNKEIAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP+ +Q I+ E ++I
Sbjct: 112 KYKSHEQQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED S RYL P Y + ++ + +D + + LK
Sbjct: 172 APLAHRLGINTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVMTGIREKLKE 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
A + + GR K YS +K+ + E+ D+L +RV++ +
Sbjct: 232 VAIQPE------ISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+QIRT+
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTV-IGPKGD--PL-EVQIRTK 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 331 EMHEIAEFGIAAHWAYKEG 349
>gi|311069245|ref|YP_003974168.1| GTP pyrophosphokinase RelA/SpoT [Bacillus atrophaeus 1942]
gi|419820104|ref|ZP_14343718.1| GTP pyrophosphokinase RelA/SpoT [Bacillus atrophaeus C89]
gi|310869762|gb|ADP33237.1| GTP pyrophosphokinase RelA/SpoT [Bacillus atrophaeus 1942]
gi|388475754|gb|EIM12463.1| GTP pyrophosphokinase RelA/SpoT [Bacillus atrophaeus C89]
Length = 734
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 109/326 (33%), Positives = 166/326 (50%), Gaps = 25/326 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL+MD I+ G L VVE V++ +++ A L+ ++ +
Sbjct: 55 IQVAGILVDLEMDPSTIAGGFLHDVVEDTDVTLDDLKEAFSEEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP+ +Q IS E ++I
Sbjct: 112 KYKSQEEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ + Y E+++ +K
Sbjct: 172 APLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAEREQ----YVEEVVDEVKN 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
++ D S GR K YS +K++ + E+ D+L +R+++ +
Sbjct: 228 RVEEVNISADFS--GRPKHIYSIYRKMVLQNKQFNEIYDLLAVRILVGSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PK N Y+SLH V + G PL E+QIRT
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGD--PL-EVQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEA 438
EM +A G A+H YK G EEA
Sbjct: 331 EMHEIAEYGVAAHWAYKEGKAANEEA 356
>gi|229816634|ref|ZP_04446923.1| hypothetical protein COLINT_03683 [Collinsella intestinalis DSM
13280]
gi|229807762|gb|EEP43575.1| hypothetical protein COLINT_03683 [Collinsella intestinalis DSM
13280]
Length = 797
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 172/328 (52%), Gaps = 26/328 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA++L++L+MD +V+ A LL VE S+ V G A L+ ++ N+
Sbjct: 94 VEVAIILSELKMDCDVVCAALLHDTVEDTTTSLADVTAFFGATVADLVDGVTKL---TNI 150
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ +D + A LRK F DIR +I+ LA RL MR L LP ++L + E M ++
Sbjct: 151 DVDTMDGKQALNLRKMFLAMSRDIRVVIVKLADRLHNMRTLAALPADRRLFKARETMDVY 210
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + + +ELEDLSF YL P SY + + + S+ + + + ++ L
Sbjct: 211 APLADRLGMSSIKWELEDLSFFYLEPESYQRIARMV----SESREARERFLAETIKALDD 266
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ A +E + GR K +S +K+ + G+ E+ D++ LRVI K ++V+
Sbjct: 267 ELKRAG-IEGYQITGRSKHYWSIYQKMKRKGKEFSEIYDLVALRVITK---SVVD----- 317
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY+T SLW +P R KDYI PKAN Y+SLH V G T +EIQIRT
Sbjct: 318 ---CYSTLGAAHSLWTPVPGRFKDYINMPKANNYQSLHTTV----IGPTARPLEIQIRTY 370
Query: 413 EMDMLAVNGTASHAFYK--GGLTNPEEA 438
EM A G A+H YK GG + ++A
Sbjct: 371 EMHEQAEYGIAAHWLYKRSGGSSARKDA 398
>gi|408790563|ref|ZP_11202181.1| GTP pyrophosphokinase [Lactobacillus florum 2F]
gi|408520110|gb|EKK20204.1| GTP pyrophosphokinase [Lactobacillus florum 2F]
Length = 739
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 110/326 (33%), Positives = 163/326 (50%), Gaps = 25/326 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ A VA +LA L+MDA I+AG L +VE GV + VR+ G A ++ ++
Sbjct: 51 IVHATQVAGILAGLKMDAVTITAGFLHDIVEDSGVELGDVRELFGPDVALIVDGVTKISK 110
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+K + A RK L DIR +I+ LA R+ M L++LP Q + E
Sbjct: 111 ---IKYNSTREAFAENYRKLLLVMCKDIRVMIVKLADRMHNMDTLEHLPEDVQQQYARET 167
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ ++AP+A + +EL+D+S RYL P +Y + ++S + Y +Q
Sbjct: 168 LDVYAPIADRLGMGTTKWELQDMSLRYLNPTAYYEIAHAMKSKRNERES----YIANAIQ 223
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ A++AD D + GR K YS KK++ + E+ D+ +R+I+ +
Sbjct: 224 --EVQASIADFNIDAEIYGRPKHIYSIYKKMVDKHKKFAEIYDLSAIRIIVDTVKD---- 277
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + + W+ MP R KDYIA PKAN Y+SLH V V GK PL EIQ
Sbjct: 278 -------CYAILGAVHAKWRPMPGRFKDYIAMPKANLYQSLHTTV-VGPEGK--PL-EIQ 326
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTN 434
IRT EM +A G A+H YK G T+
Sbjct: 327 IRTREMHRIAEYGVAAHWAYKQGETD 352
>gi|159184586|ref|NP_354053.2| GTP pyrophosphohydrolase/synthetase, RelA/SpoT family
[Agrobacterium fabrum str. C58]
gi|159139888|gb|AAK86838.2| GTP pyrophosphohydrolase/synthetase, RelA/SpoT family
[Agrobacterium fabrum str. C58]
Length = 744
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 163/323 (50%), Gaps = 24/323 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ L VA +L ++ +D I+ LL +E + ++ + G L+ ++K
Sbjct: 46 ISHPLEVAAILTEMHLDESTIAVALLHDTIEDTTATRAEIDELFGEDIGRLVEGLTKLKK 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L L + A LRK L D +R L++ LA RL MR ++Y+P ++ IS E
Sbjct: 106 ---LDLVTRKAKQAENLRKLLLAISDDVRVLLVKLADRLHNMRTMEYMPADKRSRISEET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLA + + ELEDLSFRYL P +Y V L ET ++ LI +++L +
Sbjct: 163 MEIYAPLAGRMGMQDMRDELEDLSFRYLNPEAYETVTNRLLELETRNEGLIKKIEDELRE 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L + L V+GR K YS +K+ E+++DV G R+++
Sbjct: 223 LLVANGLLG-----THVKGRQKKPYSVFRKMQSKSLSFEQLSDVYGFRILVDDIP----- 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY I+ + W+ +P R KDYI+ PK N YRS+H + G +R +E+Q
Sbjct: 273 ------GCYRALGIVHTRWRVVPGRFKDYISTPKQNDYRSIHTTI----VGPSRQRIELQ 322
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IRT+ M +A G A+HA YK G
Sbjct: 323 IRTKRMHEIAEFGIAAHALYKDG 345
>gi|77414296|ref|ZP_00790454.1| GTP pyrophosphokinase family protein [Streptococcus agalactiae 515]
gi|77159641|gb|EAO70794.1| GTP pyrophosphokinase family protein [Streptococcus agalactiae 515]
Length = 738
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 168/322 (52%), Gaps = 26/322 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL +DA ++ G L VVE +++ ++ G ++ ++ +
Sbjct: 55 IQVAGILADLHLDAVTVACGFLHDVVEDTEITLDEIETDFGKDVRDIIDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E M+I+
Sbjct: 112 EYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELEDLSFRYL + + + + L+DI +++ +
Sbjct: 172 APLAHRLGISRIKWELEDLSFRYLNETEFYKISHMMSEKRREREELVDIIVDKIRSYTEE 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
D + GR K YS +K+ + +++ D++ +R I++ +S++
Sbjct: 232 QGLYGD------IYGRPKHIYSIYRKMRDKKKRFDQIYDLIAIRCIMETASDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQIRT+
Sbjct: 279 ----YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGXKGPI-EIQIRTK 329
Query: 413 EMDMLAVNGTASHAFYKGGLTN 434
EM +A G A+H YK G+T+
Sbjct: 330 EMHQVAEFGVAAHWAYKKGITS 351
>gi|18071685|gb|AAL58286.1|AF188107_2 putative GTP pyrophosphokinase RelA [Lactococcus lactis subsp.
cremoris MG1363]
Length = 740
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 111/341 (32%), Positives = 173/341 (50%), Gaps = 26/341 (7%)
Query: 116 VALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKL 175
VA +LA L++DA +S G L VVE + +++ G A +++ ++ ++
Sbjct: 57 VAGILAKLKLDAVTVSCGFLHDVVEDTNFTQGDLQELFGDEIAEIVNGVTKLGK---VEY 113
Query: 176 QVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAP 234
+ +++ A RK + DIR +++ LA RL MR L +L +Q IS E M+I+AP
Sbjct: 114 KSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRPDKQKRISRETMEIYAP 173
Query: 235 LAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDA 294
LAH + + +ELEDLSFRYL + + + T + L+ +++ L+
Sbjct: 174 LAHRLGIASIKWELEDLSFRYLEEAEFYRIRGLMNEKRTAREALVT----EVIGKLQERV 229
Query: 295 TLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGER 354
A + D + GR K YS +K+ + +E+ D++ +R I + +S++
Sbjct: 230 EKAGV--DAEIYGRPKHIYSIYRKMHDKKKRFDEIYDLIAIRCITETTSDV--------- 278
Query: 355 ACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEM 414
YTT I LWK MP R KDYIA PKANGY+S+H V G P ME QIRT EM
Sbjct: 279 --YTTLGYIHDLWKPMPGRFKDYIANPKANGYQSVHTTV----YGPKGP-MEFQIRTREM 331
Query: 415 DMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALR 455
+A G A+H YK G+ + + + + EL LR
Sbjct: 332 HQIAEYGVAAHWAYKQGIKSKVDVHEISETLNWIHELVELR 372
>gi|390455260|ref|ZP_10240788.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)
[Paenibacillus peoriae KCTC 3763]
Length = 725
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 163/319 (51%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA ++ ++QMD I A LL VVE VS+ Q+R+ G A L+ +++ +
Sbjct: 49 LAVADIVVNMQMDTISIIAALLHDVVEDTTVSLAQIREHFGDTCAMLVDGLTKLER---I 105
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ RK F DIR +++ LA RL MR L Y Q I+ E ++I
Sbjct: 106 QFRSKEEQQNENYRKMFIAMAQDIRVIVIKLADRLHNMRTLKYQSEESQRRIAYETLEIF 165
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
P+A+ + + + +E+ED++ RYL P Y + + + ID ++ + L+
Sbjct: 166 CPIANRLGISAIKWEMEDIALRYLNPQQYYRIANLMHKKRAEREQFIDNVIVRIKEKLEE 225
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
ADL GR K YS KK+ + E+ D+L +R+I+ N+
Sbjct: 226 MGIQADL------SGRPKHIYSVFKKMTTKNKQFNEIYDLLAIRIIV---DNI------- 269
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY T II +LWK MP R KDYIA PKAN Y+SLH V V NG+ E+QIRT
Sbjct: 270 -KDCYATLGIIHTLWKPMPGRFKDYIAMPKANMYQSLHTTV-VGPNGEP---TEVQIRTV 324
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M A G A+H YK G
Sbjct: 325 DMHRTAEFGIAAHWAYKEG 343
>gi|148265188|ref|YP_001231894.1| (p)ppGpp synthetase I SpoT/RelA [Geobacter uraniireducens Rf4]
gi|146398688|gb|ABQ27321.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter uraniireducens Rf4]
Length = 716
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 115/334 (34%), Positives = 168/334 (50%), Gaps = 26/334 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L + VA +LADL++D + GLL VE +++++ G A L+ ++
Sbjct: 46 LVHPMEVAGILADLKLDVPTVVTGLLHDTVEDTLTTLEELEGMFGAEVARLVDGVTKIGK 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + ++ A RK L DIR +++ LA RL MR L Y P +Q I+ E
Sbjct: 106 ---IHFKTKEESQAENFRKMLLAMANDIRVILVKLADRLHNMRTLQYQPEPKQRSIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+AP+A+ + +++ ELEDLSFRYL P ++ D L S T K + Y ++++Q
Sbjct: 163 LDIYAPIANRLGISWVKSELEDLSFRYLDP--QIYYD--LASKVTKKKKERESYVDEVMQ 218
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+K LAD V GR K YS +K+ +E+ D++ +RV+++
Sbjct: 219 IIK--EKLADHGITGEVSGRSKHLYSIYRKMQSRSVDIDEIYDLVAIRVMVEDI------ 270
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY II S WK +P R KDYIA PK N Y+SLH V G ME+Q
Sbjct: 271 -----RECYEVLGIIHSTWKPIPGRFKDYIAMPKGNMYQSLHTTV----IGPYGERMEVQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPE-EAKRL 441
IRT EM +A G A+H YK G E E KR
Sbjct: 322 IRTGEMHRVAEAGIAAHWKYKEGKGYDEKEVKRF 355
>gi|375309867|ref|ZP_09775147.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)
[Paenibacillus sp. Aloe-11]
gi|375078231|gb|EHS56459.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)
[Paenibacillus sp. Aloe-11]
Length = 725
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 163/319 (51%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA ++ ++QMD I A LL VVE VS+ Q+R+ G A L+ +++ +
Sbjct: 49 LAVADIVVNMQMDTISIIAALLHDVVEDTTVSLAQIREHFGDTCAMLVDGLTKLER---I 105
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ RK F DIR +++ LA RL MR L Y Q I+ E ++I
Sbjct: 106 QFRSKEEQQNENYRKMFIAMAQDIRVIVIKLADRLHNMRTLKYQSEESQRRIAYETLEIF 165
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
P+A+ + + + +E+ED++ RYL P Y + + + ID ++ + L+
Sbjct: 166 CPIANRLGISAIKWEMEDIALRYLNPQQYYRIANLMHKKRAEREQFIDNVIVRIREKLEE 225
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
ADL GR K YS KK+ + E+ D+L +R+I+ N+
Sbjct: 226 MGIQADL------SGRPKHIYSVFKKMTTKNKQFNEIYDLLAIRIIV---DNI------- 269
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY T II +LWK MP R KDYIA PKAN Y+SLH V V NG+ E+QIRT
Sbjct: 270 -KDCYATLGIIHTLWKPMPGRFKDYIAMPKANMYQSLHTTV-VGPNGEP---TEVQIRTV 324
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M A G A+H YK G
Sbjct: 325 DMHRTAEFGIAAHWAYKEG 343
>gi|335034156|ref|ZP_08527517.1| GTP pyrophosphohydrolase/synthetase [Agrobacterium sp. ATCC 31749]
gi|333794474|gb|EGL65810.1| GTP pyrophosphohydrolase/synthetase [Agrobacterium sp. ATCC 31749]
Length = 754
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 163/323 (50%), Gaps = 24/323 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ L VA +L ++ +D I+ LL +E + ++ + G L+ ++K
Sbjct: 56 ISHPLEVAAILTEMHLDESTIAVALLHDTIEDTTATRAEIDELFGEDIGRLVEGLTKLKK 115
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L L + A LRK L D +R L++ LA RL MR ++Y+P ++ IS E
Sbjct: 116 ---LDLVTRKAKQAENLRKLLLAISDDVRVLLVKLADRLHNMRTMEYMPADKRSRISEET 172
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLA + + ELEDLSFRYL P +Y V L ET ++ LI +++L +
Sbjct: 173 MEIYAPLAGRMGMQDMRDELEDLSFRYLNPEAYETVTNRLLELETRNEGLIKKIEDELRE 232
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L + L V+GR K YS +K+ E+++DV G R+++
Sbjct: 233 LLVANGLLG-----THVKGRQKKPYSVFRKMQSKSLSFEQLSDVYGFRILVDDIP----- 282
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY I+ + W+ +P R KDYI+ PK N YRS+H + G +R +E+Q
Sbjct: 283 ------GCYRALGIVHTRWRVVPGRFKDYISTPKQNDYRSIHTTI----VGPSRQRIELQ 332
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IRT+ M +A G A+HA YK G
Sbjct: 333 IRTKRMHEIAEFGIAAHALYKDG 355
>gi|365175246|ref|ZP_09362677.1| RelA/SpoT family protein [Synergistes sp. 3_1_syn1]
gi|363613138|gb|EHL64661.1| RelA/SpoT family protein [Synergistes sp. 3_1_syn1]
Length = 784
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 173/323 (53%), Gaps = 25/323 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ +SVA +L+ +++D E I A LL V+E + QQ+ ++ G L+ ++
Sbjct: 99 IIHTVSVAAILSSMEIDRETIVASLLHDVLEDTATTPQQLSEKFGEDVVILVDGVTKLGK 158
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+ + +++ + LRK F + DIR +++ LA RL MR + R +QL I+ E
Sbjct: 159 ---LQFKSVEEYQSENLRKMFVVMAKDIRVVLIKLADRLHNMRTISSHKREKQLSIARET 215
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+APLAH + + ELEDLSFR L P Y + +R + +I + L Q
Sbjct: 216 LEIYAPLAHRLGIYQVKRELEDLSFRILDPEMYYDIKRRVRKKLPEREGIIKEAMDTLEQ 275
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
LK D + S++GR K YS +K+ + E++ D+L LRVI+K
Sbjct: 276 RLKDDNI------NASIKGRPKHFYSIYEKMRRKNLSLEQLYDLLALRVIVKT------- 322
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
+GE CY ++ ++WK +P DYIA PK+N Y+SLH V V G+ PL E+Q
Sbjct: 323 --IGE--CYQVLGLVHTIWKPIPGLFDDYIANPKSNMYQSLHTTV-VGPEGE--PL-EVQ 374
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IRT+EM +LA G A+H YK G
Sbjct: 375 IRTKEMHLLAEYGIAAHWNYKEG 397
>gi|410595250|ref|YP_006951977.1| Bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
agalactiae SA20-06]
gi|410518889|gb|AFV73033.1| Bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
agalactiae SA20-06]
Length = 715
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 177/352 (50%), Gaps = 27/352 (7%)
Query: 85 LLFKALKLSIPMLQSLPLSPDSRSP-LTKALSVALLLADLQMDAEVISAGLLRQVVESGG 143
LLF L+ + S P + + VA +LADL +DA ++ G L VVE
Sbjct: 2 LLFVKFALNYATAAHYYQARKSGEPYIIHPIQVAGILADLHLDAVTVACGFLHDVVEDTE 61
Query: 144 VSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRKFCLTY-YDIRALILD 202
+++ ++ G ++ ++ ++ + +++ A RK + DIR +++
Sbjct: 62 ITLDEIETDFGKDVRDIIDGVTKLGK---VEYKSHEEQLAENHRKMLMAMSKDIRVILVK 118
Query: 203 LAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYL 262
LA RL MR L +L + +Q IS E M+I+APLAH + + + +ELEDLSFRYL +
Sbjct: 119 LADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDLSFRYLNETEFY 178
Query: 263 FVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKD 322
+ + + L+DI +++ + D + GR K YS +K+
Sbjct: 179 KISHMMSEKRREREELVDIIVDKIRSYTEEQGLYGD------IYGRPKHIYSIYRKMRDK 232
Query: 323 GRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPK 382
+ +++ D++ +R I++ +S++ Y I LW+ MP R KDYIA PK
Sbjct: 233 KKRFDQIYDLIAIRCIMETASDV-----------YAMVGYIHELWRPMPGRFKDYIAAPK 281
Query: 383 ANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTN 434
ANGY+S+H V G P+ EIQIRT+EM +A G A+H YK G+T+
Sbjct: 282 ANGYQSIHTTV----YGPKGPI-EIQIRTKEMHQVAEFGVAAHWAYKKGITS 328
>gi|134298601|ref|YP_001112097.1| (p)ppGpp synthetase I SpoT/RelA [Desulfotomaculum reducens MI-1]
gi|134051301|gb|ABO49272.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum reducens MI-1]
Length = 721
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 176/323 (54%), Gaps = 25/323 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ L++A++LA+LQ+D + ++AGLL VVE G++++ + + A ++ ++
Sbjct: 46 IVHPLAIAIILAELQLDVQTVAAGLLHDVVEDTGITLEDIEKNFSLEIATMVDGVTKLGK 105
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+ Q ++ A LRK F DIR +++ LA RL +R L + +Q ++ E
Sbjct: 106 ---LQFQTKEERQAENLRKMFLAMAKDIRVILIKLADRLHNLRTLQFQSERKQKEVAEET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ P+AH + + +ELEDLSFRYL P Y ++ S+ + Y +++++
Sbjct: 163 LHFFTPMAHRLGIYKIKWELEDLSFRYLEPEQY----QRMKVQIAKSRAKREEYIQEVIK 218
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L + ++ + +QGR K+ YS +K+++ + +++ DV +RV LVN+
Sbjct: 219 ELAAKLSAVNIKSE--IQGRPKNLYSIYQKMVEQQKELKDIFDVQAVRV-------LVNS 269
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
+ CY + I +LWK +P R KDYIA PK+N Y+SLH V + +G+ +EIQ
Sbjct: 270 V----KDCYGSLGIAHTLWKPIPGRFKDYIAMPKSNMYQSLHTTV-IGPHGEP---VEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IRT +M +A G A+H YK G
Sbjct: 322 IRTWDMHKVAEYGIAAHWRYKEG 344
>gi|310643542|ref|YP_003948300.1| GTP pyrophosphokinase [Paenibacillus polymyxa SC2]
gi|309248492|gb|ADO58059.1| GTP pyrophosphokinase (ATP:GTP 3-pyrophosphotransferase)(PpGpp
synthetase I) ((P)ppGpp synthetase) [Paenibacillus
polymyxa SC2]
gi|392304294|emb|CCI70657.1| GTP pyrophosphokinase [Paenibacillus polymyxa M1]
Length = 725
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/317 (33%), Positives = 163/317 (51%), Gaps = 25/317 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA ++ ++QMD I A LL VVE VS+ Q+R+ G A L+ +++ +
Sbjct: 49 LAVADIVVNMQMDTISIIAALLHDVVEDTTVSLAQIREHFGDTCAMLVDGLTKLER---I 105
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ RK F DIR +++ LA RL MR L Y Q I+ E ++I
Sbjct: 106 QFRSKEEQQNENYRKMFIAMAQDIRVIVIKLADRLHNMRTLKYQSEESQRRIAYETLEIF 165
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
P+A+ + + + +E+ED++ RYL P Y + + + ID +++ + L+
Sbjct: 166 CPVANRLGISAIKWEMEDIALRYLNPQQYYRIANLMHKKRAEREQFIDNVIQRIREKLEE 225
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
ADL GR K YS KK+ + E+ D+L +R+I+ N+
Sbjct: 226 MGIQADL------SGRPKHIYSVFKKMTTKNKQFNEIYDLLAIRIIV---DNI------- 269
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY T II +LWK MP R KDYIA PKAN Y+SLH V V NG+ E+QIRT
Sbjct: 270 -KDCYATLGIIHTLWKPMPGRFKDYIAMPKANMYQSLHTTV-VGPNGEP---TEVQIRTV 324
Query: 413 EMDMLAVNGTASHAFYK 429
+M A G A+H YK
Sbjct: 325 DMHRTAEFGIAAHWAYK 341
>gi|115525032|ref|YP_781943.1| (p)ppGpp synthetase I SpoT/RelA [Rhodopseudomonas palustris BisA53]
gi|115518979|gb|ABJ06963.1| (p)ppGpp synthetase I, SpoT/RelA [Rhodopseudomonas palustris
BisA53]
Length = 759
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 166/329 (50%), Gaps = 25/329 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ L VA +L DL++D I A LL +E + ++ G L+ ++K
Sbjct: 79 FSHPLEVAAILTDLKLDDATIVAALLHDTIEDTEATRTEIDKIFGHEIGALVEGLTKLKR 138
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+L + + A LRK L D +R L++ LA RL MR L+++P + I+ E
Sbjct: 139 ---LELVSREAKQAENLRKLLLAISDDVRVLLIKLADRLHNMRTLEFVPPASRQRIAEET 195
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+APLA + + + ELED SFR + P +Y V L + ++ LI + QL
Sbjct: 196 LDIYAPLAGRMGMHEMREELEDQSFRTINPDAYAVVTQRLDALADRNRNLIGEIESQLSA 255
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L+ + D V GR K +S K+ + E+++D+ G RVI++
Sbjct: 256 NLQQNGI------DARVYGRRKRPFSIWNKMERKSVGFEQLSDIYGFRVILQDVE----- 304
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
ACY ++ + W +P R KDYI+ PK N YRS+H V G T+ +E+Q
Sbjct: 305 ------ACYRALGVVHTTWPVVPGRFKDYISTPKQNDYRSIHTTV----IGPTQQRVELQ 354
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
+RTEEMD +A G A+HAFYK G+ +P E
Sbjct: 355 LRTEEMDQIAEIGIAAHAFYKDGVESPTE 383
>gi|77411860|ref|ZP_00788193.1| GTP pyrophosphokinase family protein [Streptococcus agalactiae
CJB111]
gi|77162081|gb|EAO73059.1| GTP pyrophosphokinase family protein [Streptococcus agalactiae
CJB111]
Length = 738
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 168/322 (52%), Gaps = 26/322 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL +DA ++ G L VVE +++ ++ G ++ ++ +
Sbjct: 55 IQVAGILADLHLDAVTVACGFLHDVVEDTEITLDEIETDFGKDVRDIIDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E M+I+
Sbjct: 112 EYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELEDLSFRYL + + + + L+DI +++ +
Sbjct: 172 APLAHRLGISRIKWELEDLSFRYLNETEFYKISHMMSEKRREREELVDIIVDKIRSYTEE 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
D + GR K YS +K+ + +++ D++ +R I++ +S++
Sbjct: 232 QGLYGD------IYGRPKHIYSIYRKMRDKKKRFDQIYDLIAIRCIMETASDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQIRT+
Sbjct: 279 ----YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQIRTK 329
Query: 413 EMDMLAVNGTASHAFYKGGLTN 434
EM +A G A+H YK G+T+
Sbjct: 330 EMHQVAEFGVAAHWAYKKGITS 351
>gi|22538077|ref|NP_688928.1| GTP pyrophosphokinase [Streptococcus agalactiae 2603V/R]
gi|25011966|ref|NP_736361.1| hypothetical protein gbs1928 [Streptococcus agalactiae NEM316]
gi|76788162|ref|YP_330495.1| GTP pyrophosphokinase [Streptococcus agalactiae A909]
gi|77405021|ref|ZP_00782121.1| GTP pyrophosphokinase family protein [Streptococcus agalactiae
H36B]
gi|77407895|ref|ZP_00784647.1| GTP pyrophosphokinase family protein [Streptococcus agalactiae
COH1]
gi|339300607|ref|ZP_08649750.1| GTP diphosphokinase [Streptococcus agalactiae ATCC 13813]
gi|417006340|ref|ZP_11944910.1| GTP pyrophosphokinase [Streptococcus agalactiae FSL S3-026]
gi|421146328|ref|ZP_15606044.1| GTP pyrophosphokinase [Streptococcus agalactiae GB00112]
gi|22534982|gb|AAN00801.1|AE014279_8 GTP pyrophosphokinase family protein [Streptococcus agalactiae
2603V/R]
gi|24413508|emb|CAD47587.1| Unknown [Streptococcus agalactiae NEM316]
gi|76563219|gb|ABA45803.1| GTP pyrophosphokinase [Streptococcus agalactiae A909]
gi|77173540|gb|EAO76657.1| GTP pyrophosphokinase family protein [Streptococcus agalactiae
COH1]
gi|77176315|gb|EAO79084.1| GTP pyrophosphokinase family protein [Streptococcus agalactiae
H36B]
gi|319745978|gb|EFV98261.1| GTP diphosphokinase [Streptococcus agalactiae ATCC 13813]
gi|341576521|gb|EGS26932.1| GTP pyrophosphokinase [Streptococcus agalactiae FSL S3-026]
gi|401686962|gb|EJS82926.1| GTP pyrophosphokinase [Streptococcus agalactiae GB00112]
Length = 738
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 168/322 (52%), Gaps = 26/322 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL +DA ++ G L VVE +++ ++ G ++ ++ +
Sbjct: 55 IQVAGILADLHLDAVTVACGFLHDVVEDTEITLDEIETDFGKDVRDIIDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E M+I+
Sbjct: 112 EYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELEDLSFRYL + + + + L+DI +++ +
Sbjct: 172 APLAHRLGISRIKWELEDLSFRYLNETEFYKISHMMSEKRREREELVDIIVDKIRSYTEE 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
D + GR K YS +K+ + +++ D++ +R I++ +S++
Sbjct: 232 QGLYGD------IYGRPKHIYSIYRKMRDKKKRFDQIYDLIAIRCIMETASDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQIRT+
Sbjct: 279 ----YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQIRTK 329
Query: 413 EMDMLAVNGTASHAFYKGGLTN 434
EM +A G A+H YK G+T+
Sbjct: 330 EMHQVAEFGVAAHWAYKKGITS 351
>gi|226311469|ref|YP_002771363.1| GTP pyrophosphokinase [Brevibacillus brevis NBRC 100599]
gi|226094417|dbj|BAH42859.1| GTP pyrophosphokinase [Brevibacillus brevis NBRC 100599]
Length = 723
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 166/319 (52%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
++VA +LA+L MDA I+AG L VVE +++ +R++ G A L+ +++ +
Sbjct: 51 IAVAGILANLHMDAVTIAAGFLHDVVEDTEITLDHLREQFGPDVALLVDGVTKLEK---I 107
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK + DIR +++ LA RL MR L ++ +Q IS E ++I
Sbjct: 108 KYKSKEEQLAENHRKMLVAMAQDIRVIMIKLADRLHNMRTLRHMSEEKQREISDETLEIF 167
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + +ELED + RYL P Y + ++ + ++ + + +
Sbjct: 168 APLAHRLGIASVKWELEDTALRYLNPQQYYRIVNLMQKKRVEREAYLNEASDTIRE---- 223
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
L +L + + GR K YS KK+ + + E+ D+L LR+I+
Sbjct: 224 --KLGELNIEAEISGRPKHIYSIFKKMTRQNKQFNEIYDLLALRIIVNDI---------- 271
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
R CY I+ +LWK MP R KDYIA PK N Y+SLH V + G+ PL E+QIRT
Sbjct: 272 -RDCYAVLGIVHTLWKPMPGRFKDYIAMPKTNMYQSLHTTV-IGPKGE--PL-EVQIRTW 326
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M A G A+H YK G
Sbjct: 327 DMHQTAEIGIAAHWAYKEG 345
>gi|187932883|ref|YP_001885230.1| GTP pyrophosphokinase [Clostridium botulinum B str. Eklund 17B]
gi|187721036|gb|ACD22257.1| RelA/SpoT family protein [Clostridium botulinum B str. Eklund 17B]
Length = 728
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 176/327 (53%), Gaps = 29/327 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L MD I+AGLL V+E S + ++ A+L++ ++ +
Sbjct: 48 IDVAEILAELGMDTSTIAAGLLHDVIEDTTCSYESMKTIFNEEIANLVNGVTKLGK---I 104
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A +RK L DIR +I+ LA RL MR L ++P+ +Q + + E + I+
Sbjct: 105 QYKTKEEQQADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKFMPKGKQKLKAKETLDIY 164
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLI--DIYKEQLLQCL 290
APLAH + + + +ELEDLSFRYL D + + E ++ + + Y +++ L
Sbjct: 165 APLAHRLGMSKIKWELEDLSFRYLHE------DEYYKLVEQIAEKRVERETYINEVVCYL 218
Query: 291 KTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSE 350
K + + D ++GR K YS KK++ + E++ D+ +R+ LVN+
Sbjct: 219 KEKLDESGI--DSDIEGRPKHFYSIYKKMINKNKSIEQIFDLTAIRI-------LVNSV- 268
Query: 351 VGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIR 410
+ CY I+ +++K +P R KDYIA PK N Y+SLH V + + GKT EIQIR
Sbjct: 269 ---KDCYGVLGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTV-IGNQGKT---FEIQIR 321
Query: 411 TEEMDMLAVNGTASHAFYKGGLTNPEE 437
T EM A G A+H YK G N E+
Sbjct: 322 TFEMHKTAEYGIAAHWKYKEGDKNEED 348
>gi|289523398|ref|ZP_06440252.1| GTP diphosphokinase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
gi|289503090|gb|EFD24254.1| GTP diphosphokinase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
Length = 764
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 176/329 (53%), Gaps = 25/329 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ LSVA +L+D+ +D E + A LL V+E + ++V+ + G A L+ ++ N
Sbjct: 96 VVHVLSVAGILSDVNIDVETLVAALLHDVIEDTDSTFEEVKAKFGTNVAVLVDGVTKLGN 155
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + ++D A LRK F + DIR +++ LA RL MR + L R +QL I+ E
Sbjct: 156 ---IDFKTVEDYQAENLRKMFLVMAKDIRVVLIKLADRLHNMRTIQVLRREKQLRIARET 212
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+APLAH + ++ ELEDL+F+ L P Y + +R + +I + L +
Sbjct: 213 LEIYAPLAHRLGIYHMKRELEDLAFKVLEPDMYYEIRRRVRKKLPEREAIIKEAIDALSK 272
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L A + GR K YS +K+ + E++ D+L LRVI ++++V+
Sbjct: 273 KLDEGGIRA------FITGRAKHFYSIYEKMKRKNLTIEQMYDLLALRVI---TNSVVD- 322
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY I+ ++WK +P + DYIA PK+N Y+SLH V V +G+ PL E+Q
Sbjct: 323 -------CYQVLGIVHTIWKPIPGQFDDYIANPKSNMYQSLHTTV-VGPSGE--PL-EVQ 371
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
IRT +M +A G A+H YK G P++
Sbjct: 372 IRTWDMHWIAEYGIAAHWRYKEGQIKPDD 400
>gi|188588536|ref|YP_001920360.1| GTP pyrophosphokinase [Clostridium botulinum E3 str. Alaska E43]
gi|188498817|gb|ACD51953.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Clostridium botulinum E3 str.
Alaska E43]
Length = 728
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/328 (32%), Positives = 174/328 (53%), Gaps = 25/328 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L MD I+AGLL V+E S + ++ A+L++ ++ +
Sbjct: 48 IDVAEILAELGMDTSTIAAGLLHDVIEDTTCSYESMKTIFNEEIANLVNGVTKLGK---I 104
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A +RK L DIR +I+ LA RL MR L ++P+ +Q + + E + I+
Sbjct: 105 QYKTKEEQQADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKFMPKGKQKLKAKETLDIY 164
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELEDLSFRYL Y + + + I+ +++ LK
Sbjct: 165 APLAHRLGMSKIKWELEDLSFRYLHEDEYYQLVEQIAEKRVERETYIN----EVVCYLKE 220
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ + D ++GR K YS KK++ + E++ D+ +R+ LVN+
Sbjct: 221 KLDESGI--DSDIEGRPKHFYSIYKKMINKNKSIEQIFDLTAIRI-------LVNSV--- 268
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY I+ +++K +P R KDYIA PK N Y+SLH V + + GKT EIQIRT
Sbjct: 269 -KDCYGVLGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTV-IGNQGKT---FEIQIRTF 323
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKR 440
EM A G A+H YK G N E+ +
Sbjct: 324 EMHKTAEYGIAAHWKYKEGDKNEEDKAK 351
>gi|307719606|ref|YP_003875138.1| GTP pyrophosphokinase [Spirochaeta thermophila DSM 6192]
gi|306533331|gb|ADN02865.1| probable GTP pyrophosphokinase [Spirochaeta thermophila DSM 6192]
Length = 662
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/330 (36%), Positives = 170/330 (51%), Gaps = 35/330 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLH-----ES 164
++ L VA +LADL MD + A LL +E G + ++ R G A L+ S
Sbjct: 49 ISHPLEVARILADLGMDTGTLIAALLHDTIEDTGTTRDEIASRFGEEVALLVEGVTKISS 108
Query: 165 LRVKNNVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLM 223
LR +N K+Q A ++RK L DIR +++ LA +L MR L YLP +Q
Sbjct: 109 LRARNR---KIQ-----AAESIRKMLLAMAKDIRVILIKLADKLHNMRTLQYLPPAKQKA 160
Query: 224 ISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYK 283
I+ E ++I+APLA + + L ELEDL+ ++L P Y ++ ++ L+
Sbjct: 161 IATECLEIYAPLAERLGMSSLKDELEDLALKHLQPEVYAEIEHYVNERIEARTALL---- 216
Query: 284 EQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSS 343
E++ K A + V +Q R K YS +K+ + R EE+ DVLG+R+
Sbjct: 217 EEIALNTKKAAEREGIA--VEIQMRRKHLYSIYQKMKRKARPLEEIYDVLGIRL------ 268
Query: 344 NLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRP 403
L NT E CYT I+ L+K + R KDYIA PKAN Y+SLH V V G T
Sbjct: 269 -LCNT----ETECYTLLGIVHRLYKPLEGRFKDYIAMPKANRYQSLHTTVMVP--GGT-- 319
Query: 404 LMEIQIRTEEMDMLAVNGTASHAFYKGGLT 433
L+E+QIRT +M A G A+H YK G+T
Sbjct: 320 LVEVQIRTHQMHRTAEYGIAAHWLYKEGIT 349
>gi|289550601|ref|YP_003471505.1| GTP pyrophosphokinase [Staphylococcus lugdunensis HKU09-01]
gi|385784229|ref|YP_005760402.1| GTP pyrophosphokinase [Staphylococcus lugdunensis N920143]
gi|418413905|ref|ZP_12987121.1| GTP pyrophosphokinase [Staphylococcus lugdunensis ACS-027-V-Sch2]
gi|289180133|gb|ADC87378.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Staphylococcus
lugdunensis HKU09-01]
gi|339894485|emb|CCB53764.1| GTP pyrophosphokinase [Staphylococcus lugdunensis N920143]
gi|410877543|gb|EKS25435.1| GTP pyrophosphokinase [Staphylococcus lugdunensis ACS-027-V-Sch2]
Length = 729
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/396 (30%), Positives = 193/396 (48%), Gaps = 47/396 (11%)
Query: 76 NVLSSSSSRLLFKALKLSIP-----MLQSLPLSPDSRSP---------LTKALSVALLLA 121
N S+ +LFKA P +L+S L+ ++ + + VA +L
Sbjct: 3 NEYPYSADEVLFKAKSYLSPDDYQYVLKSYHLAYEAHQGQFRKNGLPYIMHPIQVAGILT 62
Query: 122 DLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDE 181
++++D I AG L V+E + V++ A ++ ++K +K + +++
Sbjct: 63 EMRLDGPTIVAGFLHDVIEDTAYTFDDVKEMFNEEIARIVDGVTKLKK---VKYRSKEEQ 119
Query: 182 TAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVA 240
A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+APLA +
Sbjct: 120 QAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPRDKQIRISKETLEIYAPLADRLG 179
Query: 241 TNYLSFELEDLSFRYLFPFSYLFVDTWLRS----HETGSKPLIDIYKEQLLQCLKTDATL 296
N + +ELED + RY+ Y + ++ E K ID+ DA +
Sbjct: 180 INTIKWELEDTALRYIDSVQYFRIVNLMKKKRSEREAYIKNAIDM----------IDAEM 229
Query: 297 ADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERAC 356
+ + GR K YS +K++K + +++ D+L +RVI+ N +N C
Sbjct: 230 IKMKIKGEINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV----NSIND-------C 278
Query: 357 YTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDM 416
Y ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT EM
Sbjct: 279 YAILGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTV-VGPNGD--PL-EIQIRTYEMHE 334
Query: 417 LAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELA 452
+A +G A+H YK G T E+ + + + ELA
Sbjct: 335 IAEHGVAAHWAYKEGKTVDEKTQDFQNKLNWLKELA 370
>gi|304380769|ref|ZP_07363437.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|304340706|gb|EFM06638.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
Length = 736
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 171/319 (53%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V++ A ++ ++K +
Sbjct: 62 IQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKEMFNEEVARIVDGVTKLKK---V 118
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 119 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIY 178
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I E + ++T
Sbjct: 179 APLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYI----ETAIDRIRT 234
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ D++ GR K YS K++K + +++ D+L +RVI+ N +N
Sbjct: 235 EMDRMNIEGDIN--GRPKHIYSIYWKMMKQKKQFDQIFDLLAIRVIV----NSIND---- 284
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 285 ---CYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV-VGPNGD--PL-EIQIRTF 337
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A +G A+H YK G
Sbjct: 338 DMHEIAEHGVAAHWAYKEG 356
>gi|426403554|ref|YP_007022525.1| GTP pyrophosphokinase [Bdellovibrio bacteriovorus str. Tiberius]
gi|425860222|gb|AFY01258.1| GTP pyrophosphokinase [Bdellovibrio bacteriovorus str. Tiberius]
Length = 738
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 162/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ LSVA +LAD +D + I+ GLL VE +++ +R G AHL+ ++
Sbjct: 60 ISHPLSVAAILADFHLDLDTIATGLLHDTVEDTAATLEDIRTEFGDVIAHLVDGVTKIGQ 119
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+K + ++ +RK + D+R +++ LA RL MR L+++P +Q I+LE
Sbjct: 120 ---MKFKNSHEKQGENIRKMIVAMGKDVRVVLVKLADRLHNMRTLNFMPFEKQERIALET 176
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+ PLA + + L ELEDL FRY P Y + ++ E+ ID K + +
Sbjct: 177 LEIYCPLAGRMGISALKIELEDLCFRYYRPDMYYELVQQIKKTESEQNRYIDEVKVLIGK 236
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L + V GR K +S +K+ ++V DVL RV+++ +
Sbjct: 237 ELNKAGFRYE------VYGRSKHLWSIYRKMQSRNIDYDQVYDVLAFRVLVESVAE---- 286
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY ++ SLWK +P R KD+IA PKAN Y+SLH V G +EIQ
Sbjct: 287 -------CYAALGLVHSLWKPIPGRFKDFIAMPKANNYQSLHTTV----MGPGGERIEIQ 335
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM ++A G A+H YK
Sbjct: 336 IRTSEMHLVAEKGIAAHWKYK 356
>gi|256825353|ref|YP_003149313.1| (p)ppGpp synthetase, RelA/SpoT family [Kytococcus sedentarius DSM
20547]
gi|256688746|gb|ACV06548.1| (p)ppGpp synthetase, RelA/SpoT family [Kytococcus sedentarius DSM
20547]
Length = 740
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 166/321 (51%), Gaps = 27/321 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++VA LLADL MDA ++A LL VE S QQ+ G A L+ ++
Sbjct: 72 ITHPVAVAGLLADLGMDAATVAAALLHDTVEDTPYSQQQLEADFGPEIALLVDGVTKLD- 130
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
K++ D A +RK + DIR L++ LA RL R Y+ ++E
Sbjct: 131 ----KVEYGDSAQAETVRKMIVAMSKDIRVLVIKLADRLHNARTWRYVSPQSARRKAIET 186
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+ PLAH + N + +ELEDLSF++ P Y V + + P + Y ++
Sbjct: 187 LDIYTPLAHRLGMNAIKWELEDLSFKFSQPEVYEEVVRQV----AAAAPQREEYLGEIRD 242
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L+T +A+ V + GR K +S +K+ GR EE++D++ LR+++K ++
Sbjct: 243 QLET--AMAEARLPVVITGREKHYWSIYQKMSVRGRALEEIHDLIALRIMVKDVAS---- 296
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY ++ SL+ +PHR KDYIA PK+NGY+SLH V + GK +EIQ
Sbjct: 297 -------CYHALGLVHSLFTPLPHRIKDYIATPKSNGYQSLHTTV-MGTGGKP---VEIQ 345
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM LA G A+H YK
Sbjct: 346 IRTHEMHNLAEYGVAAHWRYK 366
>gi|398813763|ref|ZP_10572455.1| (p)ppGpp synthetase, RelA/SpoT family [Brevibacillus sp. BC25]
gi|398038063|gb|EJL31236.1| (p)ppGpp synthetase, RelA/SpoT family [Brevibacillus sp. BC25]
Length = 723
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 166/319 (52%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
++VA +LA+L MDA I+AG L VVE +++ +R++ G A L+ +++ +
Sbjct: 51 IAVAGILANLHMDAVTIAAGFLHDVVEDTEITLDHLREQFGPDVALLVDGVTKLEK---I 107
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK + DIR +++ LA RL MR L ++ +Q IS E ++I
Sbjct: 108 KYKSKEEQLAENHRKMLVAMAQDIRVIMIKLADRLHNMRTLRHMSEEKQREISDETLEIF 167
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + +ELED + RYL P Y + ++ + ++ + + +
Sbjct: 168 APLAHRLGIASVKWELEDTALRYLNPQQYYRIVNLMQKKRVEREAYLNEASDTIRE---- 223
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
L +L + + GR K YS KK+ + + E+ D+L LR+I+
Sbjct: 224 --KLGELNIEAEISGRPKHIYSIFKKMTRQNKQFNEIYDLLALRIIVNDI---------- 271
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
R CY I+ +LWK MP R KDYIA PK N Y+SLH V + G+ PL E+QIRT
Sbjct: 272 -RDCYAVLGIVHTLWKPMPGRFKDYIAMPKTNMYQSLHTTV-IGPKGE--PL-EVQIRTW 326
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M A G A+H YK G
Sbjct: 327 DMHQTAEIGIAAHWAYKEG 345
>gi|269836765|ref|YP_003318993.1| (p)ppGpp synthetase I SpoT/RelA [Sphaerobacter thermophilus DSM
20745]
gi|269786028|gb|ACZ38171.1| (p)ppGpp synthetase I, SpoT/RelA [Sphaerobacter thermophilus DSM
20745]
Length = 748
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 130/414 (31%), Positives = 202/414 (48%), Gaps = 48/414 (11%)
Query: 28 APRLNSHSIRAESSSSSFASSPAPLPSTAGEKMVVKLVGAFNELTERMNVLSSSSSRLLF 87
AP+++ S R + +S P PS AGE+ V + ERM + + L+
Sbjct: 3 APQIDDRSEREAAVAS-------PHPSEAGER-VATWADLEQVIRERMPGMDLT---LVR 51
Query: 88 KALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQ 147
KA + + + L ++ L+VA++LA++Q+D E + A LL V+E S++
Sbjct: 52 KAYEFA-DQAHAGKLRRSGDPYISHPLAVAIILAEMQLDQETLCAALLHDVIEDTDTSVE 110
Query: 148 QVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDET-------AAALRKFCLTYYD-IRAL 199
++ G A L+ ++ ++ +D A +LRK L D +R +
Sbjct: 111 ELTTIFGERIARLVDGVTKLGR---IRWATEEDSVTREKERQAESLRKMFLAMVDDVRVV 167
Query: 200 ILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPF 259
++ LA RL MR L+++PR +QL + E M+I+APLA+ + L ELEDL+ RYL P
Sbjct: 168 LIKLADRLHNMRTLEHMPRAKQLRSAQETMEIYAPLANRLGIWQLKSELEDLALRYLDPQ 227
Query: 260 SYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDAT--LADLVEDVSVQGRYKSRYSTMK 317
+Y + L T +E+ LQ + D T LA+ + R K S +
Sbjct: 228 TYFSIKRALDRRGTD--------RERYLQRVINDLTKALAEAGIRAEISAREKHITSIAR 279
Query: 318 KLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDY 377
K+ + GR +E+ DVLG+RVI+ + CY +I ++W +P DY
Sbjct: 280 KMERKGRSFDEIYDVLGVRVIVDEKKD-----------CYGALGVIHTMWHPIPGEFDDY 328
Query: 378 IARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGG 431
IA PK + Y+S+H AV D PL EIQIRT EM +A G A+H YK G
Sbjct: 329 IATPKESMYQSIHTAVLGPDG---HPL-EIQIRTAEMHHVAEYGIAAHWRYKEG 378
>gi|315658096|ref|ZP_07910968.1| GTP diphosphokinase [Staphylococcus lugdunensis M23590]
gi|315496425|gb|EFU84748.1| GTP diphosphokinase [Staphylococcus lugdunensis M23590]
Length = 758
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/396 (30%), Positives = 193/396 (48%), Gaps = 47/396 (11%)
Query: 76 NVLSSSSSRLLFKALKLSIP-----MLQSLPLSPDSRSP---------LTKALSVALLLA 121
N S+ +LFKA P +L+S L+ ++ + + VA +L
Sbjct: 32 NEYPYSADEVLFKAKSYLSPDDYQYVLKSYHLAYEAHQGQFRKNGLPYIMHPIQVAGILT 91
Query: 122 DLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDE 181
++++D I AG L V+E + V++ A ++ ++K +K + +++
Sbjct: 92 EMRLDGPTIVAGFLHDVIEDTAYTFDDVKEMFNEEIARIVDGVTKLKK---VKYRSKEEQ 148
Query: 182 TAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVA 240
A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+APLA +
Sbjct: 149 QAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPRDKQIRISKETLEIYAPLADRLG 208
Query: 241 TNYLSFELEDLSFRYLFPFSYLFVDTWLRS----HETGSKPLIDIYKEQLLQCLKTDATL 296
N + +ELED + RY+ Y + ++ E K ID+ DA +
Sbjct: 209 INTIKWELEDTALRYIDSVQYFRIVNLMKKKRSEREAYIKNAIDM----------IDAEM 258
Query: 297 ADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERAC 356
+ + GR K YS +K++K + +++ D+L +RVI+ N +N C
Sbjct: 259 IKMKIKGEINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV----NSIND-------C 307
Query: 357 YTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDM 416
Y ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT EM
Sbjct: 308 YAILGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTV-VGPNGD--PL-EIQIRTYEMHE 363
Query: 417 LAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELA 452
+A +G A+H YK G T E+ + + + ELA
Sbjct: 364 IAEHGVAAHWAYKEGKTVDEKTQDFQNKLNWLKELA 399
>gi|381210458|ref|ZP_09917529.1| GTP pyrophosphokinase [Lentibacillus sp. Grbi]
Length = 733
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/323 (33%), Positives = 163/323 (50%), Gaps = 25/323 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +L DL+MD I+ G L VVE V+++Q+ D A L+ ++
Sbjct: 51 IVHPVQVAGILVDLEMDPVTIAGGFLHDVVEDTEVTLEQLEDSFNEEVAMLVDGVTKLGK 110
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+K + + A RK F DIR +++ LA RL MR L +LP +Q IS E
Sbjct: 111 ---IKYKSKEALQAENHRKMFVAMARDIRVILIKLADRLHNMRTLKHLPPNKQRRISNET 167
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I APLAH + + + +ELED + RYL P Y + ++ + ID ++L
Sbjct: 168 LEIFAPLAHRLGISTIKWELEDTALRYLNPQQYYRIVQLMKQKREERETYIDEVIDEL-- 225
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ L D+ + + GR K YS +K+ K + E+ D+L +R+++ +
Sbjct: 226 ----EKQLDDVNIEADISGRPKHLYSIYRKMAKQNKQFNEIYDLLAVRILVHSIKD---- 277
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY II + WK MP R KDYIA PK N Y+SLH V + G PL E+Q
Sbjct: 278 -------CYAVLGIIHTCWKPMPGRFKDYIAMPKPNLYQSLHTTV-IGPKGD--PL-EVQ 326
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IRT+EM +A G A+H YK G
Sbjct: 327 IRTKEMHEIAEYGIAAHWAYKEG 349
>gi|359782489|ref|ZP_09285710.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pseudomonas psychrotolerans L19]
gi|359369756|gb|EHK70326.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pseudomonas psychrotolerans L19]
Length = 719
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 167/335 (49%), Gaps = 26/335 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + + + G A L+ V
Sbjct: 57 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALAGQFGETVAELVDG---VSK 113
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+K + + A +K + DIR +++ LA RL MR LD +P + I+ E
Sbjct: 114 LTQMKFETKAEAQAENFQKMTMAMSKDIRVILVKLADRLHNMRTLDAMPPDKSRRIAKET 173
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + E EDL FR + P + +++ + ++ +E L
Sbjct: 174 LEIYAPIANRLGMHDFYVEFEDLGFRAMHPMRAERIQRAVKTARGNRREILGKIQESLAN 233
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D D V GR K +S +K+ + E+ DV G R+I+ + V+T
Sbjct: 234 CLARDGL------DGEVVGREKHLHSIYQKMRGKRKSFNEIMDVYGFRIIV----DKVDT 283
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 284 -------CYRVLGAVHNLYKPFPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 332
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKA 443
IRT EM+ +A NG A+H YK G P A L+A
Sbjct: 333 IRTREMEEMANNGIAAHGLYKAGGDEP-RASHLRA 366
>gi|116620408|ref|YP_822564.1| (p)ppGpp synthetase I SpoT/RelA [Candidatus Solibacter usitatus
Ellin6076]
gi|116223570|gb|ABJ82279.1| (p)ppGpp synthetase I, SpoT/RelA [Candidatus Solibacter usitatus
Ellin6076]
Length = 742
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 171/333 (51%), Gaps = 26/333 (7%)
Query: 105 DSRSP-LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHE 163
DS P + + VA +LAD++MD + GLL VVE V+++QVR G A +
Sbjct: 61 DSGEPYMAHPVMVAHILADMRMDVVAMETGLLHDVVEDTSVTVEQVRKEFGPDVARCVDG 120
Query: 164 SLRVKNNVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQL 222
V L + +D A ++RK L DIR +++ LA R+ MR L YL ++
Sbjct: 121 ---VTKLTKLDVFSAEDRQAESVRKMLLAMVEDIRVILVKLADRIHNMRTLGYLNPERRE 177
Query: 223 MISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIY 282
I+ E ++I+AP+AH + + ELEDL+F++L P +Y + + + S ++ ++
Sbjct: 178 RIARETIEIYAPIAHRLGMGKVRGELEDLAFQHLEPDAYQEILSAIESKRHSNEEFLNEI 237
Query: 283 KEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPS 342
+ + L+ + A + GR K YS +K+ + ++V D++ LR++
Sbjct: 238 RHTVESELRREGIPA------RIDGRVKRPYSVFQKMRRQKISLDQVYDLMALRILTDSV 291
Query: 343 SNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTR 402
N CY +I + W+ +P R KD+IA P+ N Y+SLH +V V +G+T
Sbjct: 292 KN-----------CYAALGVIHNKWRPIPGRIKDFIAIPRPNLYQSLHTSV-VGPHGQT- 338
Query: 403 PLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNP 435
E+QIRTEEM +A G A+H YK G P
Sbjct: 339 --FEVQIRTEEMHRIAEEGIAAHWKYKEGRKGP 369
>gi|325292409|ref|YP_004278273.1| GTP pyrophosphohydrolase/synthetase [Agrobacterium sp. H13-3]
gi|325060262|gb|ADY63953.1| GTP pyrophosphohydrolase/synthetase [Agrobacterium sp. H13-3]
Length = 763
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 166/325 (51%), Gaps = 28/325 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ L VA +L ++ +D I+ LL +E + ++ + G L+ ++K
Sbjct: 65 ISHPLEVAAILTEMHLDESTIAVALLHDTIEDTTATRAEIDELFGEDIGRLVEGLTKLKK 124
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L L + A LRK L D +R L++ LA RL MR ++Y+P ++ IS E
Sbjct: 125 ---LDLVTRKAKQAENLRKLLLAISDDVRVLLVKLADRLHNMRTMEYMPADKRSRISEET 181
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLA + + ELEDLSFRYL P +Y V L+ ET ++ LI +++L +
Sbjct: 182 MEIYAPLAGRMGMQDMRDELEDLSFRYLNPEAYETVTNRLQELETRNEGLIKKIEDELRE 241
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIK--PSSNLV 346
L + L SV+GR K YS +K+ E+++DV G R+++ PS
Sbjct: 242 LLVANGLLG-----ASVKGRQKKPYSVFRKMQSKSLSFEQLSDVYGFRILVDDIPS---- 292
Query: 347 NTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLME 406
CY I+ + W+ + R KDYI+ PK N YRS+H + G +R +E
Sbjct: 293 ---------CYRALGIVHTRWRVVSGRFKDYISTPKQNDYRSIHTTI----VGPSRQRIE 339
Query: 407 IQIRTEEMDMLAVNGTASHAFYKGG 431
+Q+RT+ M +A G A+HA YK G
Sbjct: 340 LQLRTKRMSEIAEFGIAAHALYKDG 364
>gi|443632083|ref|ZP_21116263.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443348198|gb|ELS62255.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 734
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/326 (34%), Positives = 168/326 (51%), Gaps = 25/326 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL+MD I+ G L VVE V++ +++ A L+ ++ +
Sbjct: 55 IQVAGILVDLEMDPSTIAGGFLHDVVEDTDVTLDDLKEAFSEEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP+ +Q IS E ++I
Sbjct: 112 KYKSQEEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ ++Y E+++ +K
Sbjct: 172 APLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAER----ELYVEEVVNEVKK 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
++ D S GR K YS +K++ + E+ D+L +R+ LVN+
Sbjct: 228 RVEEVNIKADFS--GRPKHIYSIYRKMVLQNKQFNEIYDLLAVRI-------LVNSI--- 275
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY II + WK MP R KDYIA PK N Y+SLH V + G PL E+QIRT
Sbjct: 276 -KDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGD--PL-EVQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEA 438
EM +A G A+H YK G E A
Sbjct: 331 EMHEIAEYGVAAHWAYKEGKAANEGA 356
>gi|229086970|ref|ZP_04219127.1| GTP pyrophosphokinase [Bacillus cereus Rock3-44]
gi|228696346|gb|EEL49174.1| GTP pyrophosphokinase [Bacillus cereus Rock3-44]
Length = 728
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/323 (33%), Positives = 163/323 (50%), Gaps = 33/323 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD +SAG L VVE V+++ + A L+ ++ +
Sbjct: 55 IQVAGILVDLHMDPSTVSAGFLHDVVEDTEVTLEDIEREFNKEIAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ L+ RL MR L +LP+ +Q I+ E ++I
Sbjct: 112 KYKSHEQQQAENHRKMFIAMAQDIRVILIKLSDRLHNMRTLKHLPQEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED S RYL P Y + ++ + +D +
Sbjct: 172 APLAHRLGINTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLD----------EV 221
Query: 293 DATLADLVEDVSVQ----GRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ D +++V++Q GR K YS +K+ + E+ D+L +RV++ +
Sbjct: 222 MTGIRDKLKEVAIQPEISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKD---- 277
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+Q
Sbjct: 278 -------CYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTV-IGPKGD--PL-EVQ 326
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IRT+EM +A G A+H YK G
Sbjct: 327 IRTKEMHEIAEYGIAAHWAYKEG 349
>gi|114776357|ref|ZP_01451402.1| GTP pyrophosphokinase [Mariprofundus ferrooxydans PV-1]
gi|114553187|gb|EAU55585.1| GTP pyrophosphokinase [Mariprofundus ferrooxydans PV-1]
Length = 711
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/372 (30%), Positives = 184/372 (49%), Gaps = 29/372 (7%)
Query: 70 ELTERMNVLSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMDAEV 129
E+TER+ + + ++ L + + + +T L+VA +LA L MD
Sbjct: 6 EITERVALYAPKANLELINCAYVFAAHAHAGQVRSSGDPYITHPLAVAGILASLGMDEAS 65
Query: 130 ISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRKF 189
+ LL VE GV + ++ + G A L+ ++ + + + A RK
Sbjct: 66 VITALLHDTVEDTGVKLSEIEENFGADVARLVDGVTKIGQ---IHFNSSEHKQAENFRKM 122
Query: 190 CL-TYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFEL 248
L T D+R LI+ LA RL MR L ++P +++ I E ++I+APLAH + +++ E+
Sbjct: 123 ILATAKDLRVLIVKLADRLHNMRTLGFVPEHKRRRIGEETLQIYAPLAHRLGMHWIKQEM 182
Query: 249 EDLSFRYLFPFSY--LFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQ 306
EDL F +L P +Y L V+ G +++ +E+L ++ L +V
Sbjct: 183 EDLVFSHLEPEAYKALMVEM------QGRLEMLNQTRERLEMLIQEALQRKGLA--ATVH 234
Query: 307 GRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSL 366
GR K YS +K+ + +++ D++ RVI+ + + CY I+ SL
Sbjct: 235 GRMKHLYSIHEKMQRKHVNFDDIFDLIAFRVIVDDA-----------QTCYQALGIVHSL 283
Query: 367 WKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHA 426
++ +P R KDYIA PK NGY+SLH AV +N + +EIQIRT M A +G ASH
Sbjct: 284 YRPVPGRFKDYIALPKPNGYQSLHTAVIGPENFR----IEIQIRTHLMHSYAEDGVASHW 339
Query: 427 FYKGGLTNPEEA 438
YK G T +E+
Sbjct: 340 AYKEGKTAEKES 351
>gi|389844677|ref|YP_006346757.1| RelA/SpoT family (p)ppGpp synthetase [Mesotoga prima MesG1.Ag.4.2]
gi|387859423|gb|AFK07514.1| (p)ppGpp synthetase, RelA/SpoT family [Mesotoga prima MesG1.Ag.4.2]
Length = 725
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/335 (33%), Positives = 175/335 (52%), Gaps = 28/335 (8%)
Query: 105 DSRSP-LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHE 163
DS P ++ + VA +LA D + I AG+L +VE V + ++ ++ G A ++
Sbjct: 48 DSGEPFISHPIEVAKILAQFSADNDTIIAGILHDIVEDCNVPLSEIAEKYGDTVALIVDG 107
Query: 164 SLRVKN-NVNLKLQ---VLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPR 218
++ N +N KL+ V LRK L D R +I+ LA RL MR LD+L
Sbjct: 108 VTKISNLKLNEKLESKIVKSRMKVETLRKMLLALSDDPRIIIVKLADRLHNMRTLDFLKD 167
Query: 219 YQQLM-ISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKP 277
++ + E ++I+AP+AH + + + ELEDLSF+Y +P + + + +
Sbjct: 168 PEKKRDKARETLQIYAPIAHRIGMHKIQAELEDLSFKYEYPEEFKELKFKVNRKLKERQD 227
Query: 278 LIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRV 337
++D YKE +L+ L+ + A ++GR K YS +K++K R +EV D++ LR+
Sbjct: 228 IMDEYKEIVLRELRKNRISA------LIEGRVKHLYSIWQKMIKKNRSFDEVFDLIALRI 281
Query: 338 IIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSD 397
+ N CY + SLW MP R KDYIA PK+NGY+SLH + ++
Sbjct: 282 VTGDEVN-----------CYKILGAVHSLWPPMPGRFKDYIAAPKSNGYKSLHTTL-ITH 329
Query: 398 NGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGGL 432
G+ PL EIQIR+E M A G ASH YK G+
Sbjct: 330 RGE--PL-EIQIRSERMHKEAEYGVASHWVYKEGI 361
>gi|339448283|ref|ZP_08651839.1| (p)ppGpp synthetase I SpoT/RelA [Lactobacillus fructivorans KCTC
3543]
Length = 741
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/332 (34%), Positives = 165/332 (49%), Gaps = 25/332 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +L DL MDAE I+AG L VVE G +I + + G + ++ ++
Sbjct: 51 INHPVEVAGILTDLHMDAETITAGFLHDVVEDTGATIGDITELFGDHVSLIVDGVSKLSK 110
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+K + ++ A RK L DIR +I+ LA RL M LD L +Q I+ E
Sbjct: 111 ---IKYKSSKEQLAENHRKLLLAMCKDIRVMIVKLADRLHNMETLDALRPDKQKRIAQET 167
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+APLA + + +ELEDLS RYL P Y + + S ++ +++ Q
Sbjct: 168 LDIYAPLADRLGIGTIKWELEDLSLRYLKPDDYYEIVNLMNSKRNERVAYVNRAVKKVQQ 227
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
++ + V GR K YS +K+ + +E+ D+L +RVI+K +
Sbjct: 228 AIEGLGIKGE------VYGRPKHIYSIYRKMHDKHKDFKEIYDLLAVRVIVKSVKD---- 277
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY I + WK P R KDYIA PK N Y+SLH V V GK PL EIQ
Sbjct: 278 -------CYAVLGAIHTEWKPFPDRFKDYIAMPKPNMYQSLHTTV-VGPEGK--PL-EIQ 326
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAKR 440
IRTEEM +A G A+H YK G T+ E+ +
Sbjct: 327 IRTEEMHRIAEYGVAAHWAYKEGKTDEVESNK 358
>gi|315640053|ref|ZP_07895178.1| GTP diphosphokinase [Enterococcus italicus DSM 15952]
gi|315484181|gb|EFU74652.1| GTP diphosphokinase [Enterococcus italicus DSM 15952]
Length = 745
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/328 (32%), Positives = 168/328 (51%), Gaps = 28/328 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+LQMD ++ G L VVE V++Q + + G A L+ ++ +
Sbjct: 63 IQVAGILAELQMDPHTVATGFLHDVVEDTDVTLQDLTEEFGPDVAMLVDGVTKLGK---I 119
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK + D+R +++ LA RL MR L +L +Q I+ E + I+
Sbjct: 120 KYKSHEEQLAENHRKMLIAMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIARETLDIY 179
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED S RY+ P Y + +++ + +D E+L +
Sbjct: 180 APLAHRLGISRIKWELEDRSLRYINPQQYYRIVHLMKTKRDEREAYVDKTVEELRIATEE 239
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
A+ + GR K YS +K++ + +E+ D+L +RVI+ +
Sbjct: 240 LDIYAE------IYGRPKHIYSIYRKMVDKKKQFDEIYDLLAIRVIVDSIKD-------- 285
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKAN Y+SLH V + NG +EIQIRT
Sbjct: 286 ---CYAVLGTIHTKWKPMPGRFKDYIAMPKANMYQSLHTTV-IGPNGNP---VEIQIRTH 338
Query: 413 EMDMLAVNGTASHAFYKGGLT---NPEE 437
EM +A G A+H YK G T NP++
Sbjct: 339 EMHEIAEFGVAAHWAYKEGKTDKVNPDQ 366
>gi|39938612|ref|NP_950378.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Onion
yellows phytoplasma OY-M]
gi|39721721|dbj|BAD04211.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Onion
yellows phytoplasma OY-M]
Length = 796
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 169/329 (51%), Gaps = 27/329 (8%)
Query: 115 SVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLK 174
+V +LA L + + AGLL V+E ++Q + G A+L++ + ++ K
Sbjct: 114 AVTKILAQLNSEPNTLMAGLLHDVLEDTNATMQDLTSLFGEDVAYLVYRATKLTKIAFHK 173
Query: 175 LQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAP 234
Q D + F DIR +I+ +A RL M+ L+ +P +QL I+ E ++IHAP
Sbjct: 174 NQGHADNQQ---KMFLAMAKDIRVVIVKIADRLHNMQTLNSMPSEKQLRIAKETLEIHAP 230
Query: 235 LAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDA 294
L H + + +LEDLS RY FP Y V +R + +E + + +
Sbjct: 231 LTHRLGLFEIKSQLEDLSLRYAFPQEYYRVSNLIRLKKQQR-------EESITKIITNIK 283
Query: 295 TLAD--LVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+L D +++ +++GR K+ YS KK++K EE+ D+L +R+I+ P+ +L
Sbjct: 284 SLLDSHQLKNYTIKGRVKNIYSIYKKIVKRKVSFEEIFDLLAIRIIV-PTVDL------- 335
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + +P R KDYIA PK N Y+SLH V D L E+QIRT+
Sbjct: 336 ---CYQCLGIIHGHFSPLPLRFKDYIAVPKPNLYQSLHTTVLTKDGS----LFEMQIRTQ 388
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRL 441
EMD +A G A+H YK T +EAK+L
Sbjct: 389 EMDEIAEKGIAAHWAYKENKTYSQEAKQL 417
>gi|34499223|ref|NP_903438.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Chromobacterium violaceum ATCC 12472]
gi|34105074|gb|AAQ61430.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [Chromobacterium
violaceum ATCC 12472]
Length = 718
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 173/323 (53%), Gaps = 25/323 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +L D ++D + ++A LL V+E GV+ + ++ G A L+ +++
Sbjct: 61 ITHPLAVATMLTDWRLDVQGLAAALLHDVLEDTGVTKPTLVEKFGKIVADLVDGLSKLER 120
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+ Q +D A + RK L DIR +I+ LA RL MR LD + ++ I+LE
Sbjct: 121 ---LEYQTKEDAQAESFRKMVLAMARDIRVIIVKLADRLHNMRTLDSMREDKRRRIALET 177
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + N + EL+DL+F++L P Y + +R+ + +++ ++LQ
Sbjct: 178 LEIYAPIANRIGLNKVYRELQDLAFKHLHPHRYSVLSKAVRAARGNRREVVN----KILQ 233
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ +++ + +++GR K+ YS KK+ + EV D+ G RV++
Sbjct: 234 AVSQRLVQSNI--EATIKGREKNLYSIYKKMQEKHLSFSEVLDIYGFRVVVNDIP----- 286
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
ACY + SL+K +P + KDYIA PK NGY+SLH + G +E+Q
Sbjct: 287 ------ACYLALGALHSLYKPIPGKFKDYIAIPKGNGYQSLHTTL----FGPYGTPVEMQ 336
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IRT EM +A G ASH YK G
Sbjct: 337 IRTREMHNVAEAGVASHWMYKSG 359
>gi|312135681|ref|YP_004003019.1| (p)ppgpp synthetase i, spot/rela [Caldicellulosiruptor owensensis
OL]
gi|311775732|gb|ADQ05219.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor owensensis
OL]
Length = 726
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 123/371 (33%), Positives = 181/371 (48%), Gaps = 36/371 (9%)
Query: 68 FNELTERMN-VLSSSSSRLLFKALKLSIPMLQSLPLSPDSRSP-LTKALSVALLLADLQM 125
NEL E++ +S L+ KA + + + S S P + L VAL+LADL++
Sbjct: 9 LNELIEKVKKYVSEEDVNLIKKAFEFAQKHHEGQARS--SGEPYIVHPLEVALILADLEL 66
Query: 126 DAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAA 185
D I AGLL VVE S++ + G A L+ ++ L+ + A
Sbjct: 67 DIASIVAGLLHDVVEDTSASLEDIEREFGKEIAELVDGVTKLGK---LEFTSKLERQAEN 123
Query: 186 LRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYL 244
RK + DIR +++ LA RL MR L YLP +Q + E ++I+APLAH + + +
Sbjct: 124 YRKMLIAMAKDIRVILIKLADRLHNMRTLKYLPPEKQRQKAQETIEIYAPLAHRLGISKI 183
Query: 245 SFELEDLSFRYLFPFSYL-FVDTWLRS---HETGSKPLIDIYKEQLLQCLKTDATLADLV 300
+ELEDLS RYL P Y V+ + E K +I + E+L + +
Sbjct: 184 KWELEDLSLRYLDPEGYYDLVEKIAKKRVEREEYIKRIISLISEKLKEA---------NI 234
Query: 301 EDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTR 360
E + GR K YS +K+ + G+ EE+ D+ +R+I+ + CY
Sbjct: 235 EVGQIDGRPKHFYSIYRKMKEQGKTLEEIYDLFAIRIIVNSVKD-----------CYGVL 283
Query: 361 EIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVN 420
II +L+K MP R KDYIA PK N Y+SLH V + G+ E+QIRT +M A
Sbjct: 284 GIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPEGEP---FEVQIRTFDMHRTAEY 339
Query: 421 GTASHAFYKGG 431
G A+H YK G
Sbjct: 340 GIAAHWKYKEG 350
>gi|312127055|ref|YP_003991929.1| (p)ppgpp synthetase i, spot/rela [Caldicellulosiruptor
hydrothermalis 108]
gi|311777074|gb|ADQ06560.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor
hydrothermalis 108]
Length = 722
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 124/371 (33%), Positives = 179/371 (48%), Gaps = 36/371 (9%)
Query: 68 FNELTERMNVLSSSSS-RLLFKALKLSIPMLQSLPLSPDSRSP-LTKALSVALLLADLQM 125
NEL ER+ +S L+ KA + + +S P + L VAL+LADL++
Sbjct: 5 LNELIERVKKYASEEDINLIKKAFDFAQKYHDGQ--ARNSGEPYIVHPLEVALILADLEL 62
Query: 126 DAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAA 185
D I AGLL VVE S++ V G A L+ ++ L+ + A
Sbjct: 63 DIASIVAGLLHDVVEDTSASLEDVEREFGKEIADLVDGVTKLGK---LEFTSKLERQAEN 119
Query: 186 LRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYL 244
RK + DIR +++ LA RL MR L YLP +Q + E + I+APLAH + + +
Sbjct: 120 YRKMLIAMAKDIRVILIKLADRLHNMRTLKYLPPEKQRQKAQETIDIYAPLAHRLGISKI 179
Query: 245 SFELEDLSFRYLFPFSYL-FVDTWLRS---HETGSKPLIDIYKEQLLQCLKTDATLADLV 300
+ELEDLS RYL P Y V+ + E K +I + E+L + +
Sbjct: 180 KWELEDLSLRYLDPEGYYDLVEKIAKKRVEREEYIKKIISLISEKLKEA---------NI 230
Query: 301 EDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTR 360
E + GR K YS +K+ + G+ EE+ D+ +R+I+ + CY
Sbjct: 231 EVGQIDGRPKHFYSIYRKMKQQGKTLEEIYDLFAIRIIVNSVKD-----------CYGVL 279
Query: 361 EIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVN 420
II +L+K MP R KDYIA PK N Y+SLH V + G+ E+QIRT +M A
Sbjct: 280 GIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPEGEP---FEVQIRTFDMHRTAEY 335
Query: 421 GTASHAFYKGG 431
G A+H YK G
Sbjct: 336 GIAAHWKYKEG 346
>gi|387929855|ref|ZP_10132532.1| GTP pyrophosphokinase RelA/SpoT [Bacillus methanolicus PB1]
gi|387586673|gb|EIJ78997.1| GTP pyrophosphokinase RelA/SpoT [Bacillus methanolicus PB1]
Length = 731
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 167/326 (51%), Gaps = 25/326 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL+MD ++AG L VVE V+++++R+ A L+ ++ +
Sbjct: 55 IQVAGILADLEMDPITVAAGFLHDVVEDTDVTLEEMREAFNDEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP +Q IS E ++I
Sbjct: 112 KYKSHEEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPLEKQRRISNETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ + +D E++ L
Sbjct: 172 APLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAEREQYLDEVIEEVRNRLNE 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ A+ + GR K YS +K+ + E+ D+L +R+++ +
Sbjct: 232 VSIKAE------ISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRIVVNSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PK N Y+SLH V + G PL E+QIRT
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGD--PL-EVQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEA 438
EM +A G A+H YK G + E +
Sbjct: 331 EMHRIAEYGIAAHWAYKEGKSVKENS 356
>gi|223998738|ref|XP_002289042.1| GTP pyrophosphokinase-like protein [Thalassiosira pseudonana
CCMP1335]
gi|220976150|gb|EED94478.1| GTP pyrophosphokinase-like protein [Thalassiosira pseudonana
CCMP1335]
Length = 505
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 165/323 (51%), Gaps = 12/323 (3%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRV-KNNVN 172
+ VALLL+ ++MDAE + AGLL VE ++ +QV G+ +++ +V K
Sbjct: 51 VEVALLLSGMKMDAETVMAGLLHDTVEDTDLTFEQVEAMFGVEVKNIVEGETKVSKLPKI 110
Query: 173 LKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKI 231
+ DE A LR+ F D R +I+ LA RL MR L ++ +Q IS E + I
Sbjct: 111 MGFSDFADEQAENLRQMFIAMTDDYRIIIVKLADRLHNMRTLRHMKPEKQKKISRETLDI 170
Query: 232 HAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLK 291
APLAH + ELED +F+YL+P Y ++ L +D + L LK
Sbjct: 171 FAPLAHRMGIWQFKSELEDTAFKYLYPEEYKLLNQRLLQRRDKIINTLDNSIQVLEHTLK 230
Query: 292 TDATLADLVEDVSVQGRYKSRYSTMKKL-LKDGRIPEEVNDVLGLRVIIKP--SSNLVNT 348
D TL ++ V GR K YS K+ +K R + D++ LRVI+KP S+
Sbjct: 231 NDPTLRSQDVEIEVVGRTKELYSLWHKMEMKHDRNLNHITDLVALRVILKPGESNGKDQG 290
Query: 349 SEVGERACYTTREIIQSL--WKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLME 406
++ G CY ++Q L ++ +P + KDYI+ PK NGY+SLH A+ +E
Sbjct: 291 ADSGVWLCYHVLGLVQHLPGFQPVPTKVKDYISFPKVNGYQSLHTALMYKGQS-----VE 345
Query: 407 IQIRTEEMDMLAVNGTASHAFYK 429
+QIRT+ M +A G ASH YK
Sbjct: 346 VQIRTQFMHQVAEYGMASHWAYK 368
>gi|203287656|ref|YP_002222671.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Borrelia
recurrentis A1]
gi|201084876|gb|ACH94450.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Borrelia
recurrentis A1]
Length = 667
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 177/356 (49%), Gaps = 43/356 (12%)
Query: 84 RLLFKALKLSIPMLQSLPLSPDSRSP-LTKALSVALLLADLQMDAEVISAGLLRQVVESG 142
+L+FK+L++S + +S+ P + + VAL L Q+D + I AGLL V+E
Sbjct: 38 KLIFKSLEISEQL--HYGQYRESKEPYVIHPIMVALFLIKFQLDFKTIIAGLLHDVLEDT 95
Query: 143 GVSIQQVRDRI---------GIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRKFCLTY 193
V +++ G+ H LH R N ++ F +T+
Sbjct: 96 SVQKEEIIKEFDQEVFSLIDGVTKIHDLHNKTRAIKEANTISKMF----------FAMTH 145
Query: 194 YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSF 253
DIR +I+ LA +L M L +LP+ ++ I+ + + + P+A + + L LEDLS
Sbjct: 146 -DIRIIIIKLADKLHNMATLSHLPKNRRERIARDCLATYVPIAERLGISSLKIYLEDLSL 204
Query: 254 RYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRY 313
+YL+P Y + +L + + + +YK +L+ + L + DV++ R K Y
Sbjct: 205 KYLYPKEYKEIKNFLSATKIEREK--KLYKGKLI----IEKELKKIGIDVTITVRSKHFY 258
Query: 314 STMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHR 373
S +K+ ++ D LG+R+I K ++ CY EI+ +WK +P R
Sbjct: 259 SIFRKMKTRNNNISQIFDTLGIRIICKK-----------QKECYEILEIVHKVWKPIPGR 307
Query: 374 TKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYK 429
KDYIA PK N Y+SLH V + ++ + L+EIQIRTEEMD +A G A+H YK
Sbjct: 308 LKDYIAIPKENKYQSLHTTVRIPEDNQ---LIEIQIRTEEMDKIAKYGVAAHWLYK 360
>gi|374606535|ref|ZP_09679392.1| (p)ppGpp synthetase I SpoT/RelA [Paenibacillus dendritiformis C454]
gi|374387846|gb|EHQ59311.1| (p)ppGpp synthetase I SpoT/RelA [Paenibacillus dendritiformis C454]
Length = 725
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/322 (33%), Positives = 160/322 (49%), Gaps = 25/322 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA ++ +QMD + A LL VVE VS+++VR + G A L+ +++ +
Sbjct: 49 LAVADIVVSMQMDPTSVVAALLHDVVEDTSVSLEEVRTKFGNTCAMLVDGLTKLER---I 105
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ RK F DIR +++ LA RL MR L Y Q I+ E ++I
Sbjct: 106 QFRSKEEQQNENYRKMFVAMANDIRVIVIKLADRLHNMRTLKYQSEESQRRIAYETLEIF 165
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
P+AH + + + +E+ED++ RYL P Y + + + I ++ + L+
Sbjct: 166 CPIAHRLGISAIKWEMEDIALRYLNPQQYYRIANLMHKKRAEREQYIADVIGRIQEKLEE 225
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
ADL GR K YS KK+ + E+ D+L +R+I+ N+
Sbjct: 226 MGITADL------SGRPKHIYSVYKKMTAKSKQFNEIYDLLAIRIIV---DNI------- 269
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY T II +LWK MP R KDYIA PK N Y+SLH V G T E+QIRT
Sbjct: 270 -KDCYATLGIIHTLWKPMPGRFKDYIAMPKTNMYQSLHTTV----IGPTGEPTEVQIRTW 324
Query: 413 EMDMLAVNGTASHAFYKGGLTN 434
EM A G A+H YK G N
Sbjct: 325 EMHRTAEYGIAAHWAYKEGGAN 346
>gi|203284118|ref|YP_002221858.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Borrelia
duttonii Ly]
gi|386859423|ref|YP_006272129.1| Guanosine-3,5-bis(Diphosphate) 3-pyrophosphohydrolase [Borrelia
crocidurae str. Achema]
gi|201083561|gb|ACH93152.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Borrelia
duttonii Ly]
gi|384934304|gb|AFI30977.1| Guanosine-3,5-bis(Diphosphate) 3-pyrophosphohydrolase [Borrelia
crocidurae str. Achema]
Length = 667
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 177/356 (49%), Gaps = 43/356 (12%)
Query: 84 RLLFKALKLSIPMLQSLPLSPDSRSP-LTKALSVALLLADLQMDAEVISAGLLRQVVESG 142
+L+FK+L++S + +S+ P + + VAL L Q+D + I AGLL V+E
Sbjct: 38 KLIFKSLEISEQL--HYGQYRESKEPYVIHPIMVALFLIKFQLDFKTIIAGLLHDVLEDT 95
Query: 143 GVSIQQVRDRI---------GIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRKFCLTY 193
V +++ G+ H LH R N ++ F +T+
Sbjct: 96 SVQKEEIIKEFDQEVFSLIDGVTKIHDLHNKTRAIKEANTISKMF----------FAMTH 145
Query: 194 YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSF 253
DIR +I+ LA +L M L +LP+ ++ I+ + + + P+A + + L LEDLS
Sbjct: 146 -DIRIIIIKLADKLHNMATLSHLPKNRRERIARDCLATYVPIAERLGISSLKIYLEDLSL 204
Query: 254 RYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRY 313
+YL+P Y + +L + + + +YK +L+ + L + DV++ R K Y
Sbjct: 205 KYLYPKEYKEIKNFLSATKIEREK--KLYKGKLI----IEKELKKIGIDVTITVRSKHFY 258
Query: 314 STMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHR 373
S +K+ ++ D LG+R+I K ++ CY EI+ +WK +P R
Sbjct: 259 SIFRKMKTRNNNISQIFDTLGIRIICKK-----------QKECYEILEIVHKVWKPIPGR 307
Query: 374 TKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYK 429
KDYIA PK N Y+SLH V + ++ + L+EIQIRTEEMD +A G A+H YK
Sbjct: 308 LKDYIAIPKENKYQSLHTTVRIPEDNQ---LIEIQIRTEEMDKIAKYGVAAHWLYK 360
>gi|302391503|ref|YP_003827323.1| (p)ppGpp synthetase I SpoT/RelA [Acetohalobium arabaticum DSM 5501]
gi|302203580|gb|ADL12258.1| (p)ppGpp synthetase I, SpoT/RelA [Acetohalobium arabaticum DSM
5501]
Length = 734
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 169/320 (52%), Gaps = 27/320 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L VAL++A+L++D I+ LL VVE VS Q+R+ G L++ ++ +
Sbjct: 62 LGVALIMAELELDIISITGALLHDVVEDTEVSFAQLRNEFGEEITLLVNGVTKLSK---I 118
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ +++ A +LRK F DIR +++ L+ RL MR L+YL + +Q I+ E ++I+
Sbjct: 119 AFKSREEQQAESLRKMFLAMSKDIRVILIKLSDRLHNMRTLEYLSQQKQERIARETIEIY 178
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCL-K 291
APLAH + + L +ELEDLSF++L P Y + + + + ID +C+ K
Sbjct: 179 APLAHRLGISTLKWELEDLSFKHLEPNKYYELSNKVSKNRDEREEYID-------RCISK 231
Query: 292 TDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEV 351
+ L D + GR K YS +K+ + + E+ D++ LRVI+ ++V
Sbjct: 232 VEKRLNLEGIDAHIYGRPKHLYSIYQKMKRKNKELSEIYDLVALRVIV---------NDV 282
Query: 352 GERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRT 411
E CY I +W +P R KDYIA PK+N Y+SLH V K PL EIQIRT
Sbjct: 283 QE--CYQVLGNIHEIWNPIPGRIKDYIAMPKSNMYQSLHTTV---IGPKGEPL-EIQIRT 336
Query: 412 EEMDMLAVNGTASHAFYKGG 431
+M A G A+H YK G
Sbjct: 337 WDMHRTAEYGVAAHWRYKEG 356
>gi|160913537|ref|ZP_02076228.1| hypothetical protein EUBDOL_00013 [Eubacterium dolichum DSM 3991]
gi|158434089|gb|EDP12378.1| RelA/SpoT family protein [Eubacterium dolichum DSM 3991]
Length = 733
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/336 (32%), Positives = 174/336 (51%), Gaps = 33/336 (9%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ A+ V +LA L+ + I+AG L VVE VS Q+V + G A L+ ++ N
Sbjct: 52 IIHAIQVGYILALLRTGPKTIAAGFLHDVVEDCNVSKQEVSELFGEEVATLVESVTKISN 111
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
LK Q + A+ RK F D+R +++ LA RL MR L Y+P +Q I+ E
Sbjct: 112 ---LKFQDEKEYLASNHRKIFIAMAKDVRVILVKLADRLHNMRTLQYMPSAKQQKIANET 168
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++++AP+AH + + + ELEDLSF+YL Y + + + E+ Q
Sbjct: 169 LEVYAPIAHRLGISDIKNELEDLSFQYLKKEKYYEIAKLVEKRKA----------ERDEQ 218
Query: 289 CLKTDATLADLVEDVSVQ----GRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSN 344
+ A ++ ++E+ ++ GR K YS KK++ + EE+ D+L +R++ S
Sbjct: 219 VQRMIADISAMMEEHHIKYRIFGRSKHLYSIYKKMVTKNKRFEEILDLLAIRIVTDTDS- 277
Query: 345 LVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPL 404
ACY I + ++ +P R KDYIA PK N Y+SLH + V+D+G +
Sbjct: 278 ----------ACYEILGYIHAKYRPIPGRFKDYIAMPKVNMYQSLHTTI-VADDGN---I 323
Query: 405 MEIQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKR 440
E+QIRTE+MD +A G A+H YK + +E ++
Sbjct: 324 FEVQIRTEKMDEIAEQGIAAHWRYKESMYGGKEIRQ 359
>gi|323455208|gb|EGB11077.1| hypothetical protein AURANDRAFT_52662, partial [Aureococcus
anophagefferens]
Length = 467
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 163/325 (50%), Gaps = 13/325 (4%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRV-- 167
+T + VA +LA MD + + +GLL VE ++ +V G+ ++ +V
Sbjct: 46 VTHPVEVAKILARTHMDRDTVVSGLLHDTVEDTDLTFGEVEAMFGVDVRRIVEGETKVSK 105
Query: 168 --KNNVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMI 224
K +L + E +R F D R +++ LA RL MR L ++P ++ I
Sbjct: 106 LPKMARDLPAADAEKEQVENMRSMFIAMAEDWRIVVVKLADRLHNMRTLRFMPPRKRAKI 165
Query: 225 SLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKE 284
S E ++I APLAH + ELE+ SF +LFP Y +D + T + ++ +
Sbjct: 166 SRETLEIFAPLAHRLGMWQYKTELEETSFEHLFPAEYAALDEAIARKRTTVEAALEECRG 225
Query: 285 QLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSN 344
+L L D + + VS++GR KS YST KK+ + E ++D++ LRV++K
Sbjct: 226 KLETMLMDDVMIKGRMRTVSIEGRTKSCYSTWKKMQRQQCGIERIDDLVALRVVLKAER- 284
Query: 345 LVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPL 404
+E CY + S W +P KDYI+ PK NGYRSLH V V ++PL
Sbjct: 285 --PEAEADTSLCYHVLGKVHSTWTPLPRTLKDYISSPKPNGYRSLHTTVLVG----SQPL 338
Query: 405 MEIQIRTEEMDMLAVNGTASHAFYK 429
E+QIRT++M +A G A+H YK
Sbjct: 339 -EVQIRTDDMHRVAELGAAAHWAYK 362
>gi|429212426|ref|ZP_19203591.1| GTP pyrophosphokinase [Pseudomonas sp. M1]
gi|428156908|gb|EKX03456.1| GTP pyrophosphokinase [Pseudomonas sp. M1]
Length = 752
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/332 (32%), Positives = 163/332 (49%), Gaps = 27/332 (8%)
Query: 105 DSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHES 164
D S L +A +LADL++D E + A ++ + V G V +++V+ R G A L+
Sbjct: 61 DGTSSFQTGLEIAEILADLKLDQESLVAAVIYRGVREGKVKLEEVQQRFGPVVAKLIEGV 120
Query: 165 LR---VKNNVNLKLQVLDDETAAA--LRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPR 218
LR + ++N + ++ A LRK + D +R ++ LA R +R +
Sbjct: 121 LRMAAISASLNPRQSMVLGTQAQIENLRKMLVAMVDDVRVALIKLAERTCAIRAVKNADE 180
Query: 219 YQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPL 278
+++ ++ EV I+APLAH + ++ +ELEDLSFRYL P Y + L +
Sbjct: 181 EKRMRVAREVFDIYAPLAHRLGIGHIKWELEDLSFRYLEPDQYKQIAKLLHERRLDREQY 240
Query: 279 IDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVI 338
I +QL L ADL GR K YS +K+ + G ++ DV +RV+
Sbjct: 241 IATVMQQLKDALAATGIKADL------SGRAKHIYSIWRKMQRKGLDFSQIYDVRAVRVL 294
Query: 339 IKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDN 398
+ R CYT I+ +LW+ +P DYIA PK NGYRSLH AV +
Sbjct: 295 VPEM-----------RDCYTALGIVHTLWRHIPKEFDDYIANPKENGYRSLHTAV-IGPE 342
Query: 399 GKTRPLMEIQIRTEEMDMLAVNGTASHAFYKG 430
GK ++E+QIRT M A G +H YKG
Sbjct: 343 GK---VLEVQIRTHAMHEEAELGVCAHWRYKG 371
>gi|300856534|ref|YP_003781518.1| GTP pyrophosphokinase [Clostridium ljungdahlii DSM 13528]
gi|300436649|gb|ADK16416.1| GTP pyrophosphokinase [Clostridium ljungdahlii DSM 13528]
Length = 725
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 164/324 (50%), Gaps = 25/324 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ + VA +L ++ +D I AGLL V+E S + ++ + A+L+ ++
Sbjct: 44 ISHPVEVAYILVEMGLDTSTIVAGLLHDVIEDTQFSYEDIKREFSVEVANLVEGVTKLGK 103
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ + +++ A +RK L D IR +++ LA RL MR L Y+P +Q + E
Sbjct: 104 ---IECKTKEEQQADNVRKMLLAMADDIRVILIKLADRLHNMRTLKYMPVKKQKEKAKET 160
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
I+APLAH + + + +ELEDL+FRY+ Y F+ + + ID QL
Sbjct: 161 FDIYAPLAHRLGMSKIKWELEDLAFRYINQNEYYFIVRKIAEKRVEREKYIDEIISQLKD 220
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
LK D ++GR K YS +K++K + +++ D+ +R+ LVNT
Sbjct: 221 NLKKSGI------DSDIEGRPKHFYSIYRKMVKKNKTIDQIFDLTAVRI-------LVNT 267
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
+ CY I +++K MP R KDYIA PK N Y+SLH V + GK EIQ
Sbjct: 268 V----KDCYAALGIAHTIYKPMPGRFKDYIAMPKPNMYQSLHSTV-IGPQGKP---FEIQ 319
Query: 409 IRTEEMDMLAVNGTASHAFYKGGL 432
IRT EM A G A+H YK G+
Sbjct: 320 IRTFEMHKTAEYGIAAHWKYKEGV 343
>gi|373456224|ref|ZP_09547991.1| (p)ppGpp synthetase I, SpoT/RelA [Caldithrix abyssi DSM 13497]
gi|371717888|gb|EHO39659.1| (p)ppGpp synthetase I, SpoT/RelA [Caldithrix abyssi DSM 13497]
Length = 732
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 164/321 (51%), Gaps = 25/321 (7%)
Query: 113 ALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVN 172
L VA +L +L MDA I A LL VE ++++ + + G A L+ ++
Sbjct: 63 CLQVARILVELHMDAPTIIAALLHDTVEDTYITLKYIEEHFGERIAWLVDGVTKIGG--- 119
Query: 173 LKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKI 231
L+ Q + A RK L+ D IR +I+ A RL MR LD +P ++ I++E +
Sbjct: 120 LRFQSKEMRQAETFRKMLLSMVDDIRVIIIKFADRLHNMRTLDSVPDAKKERIAIETRDV 179
Query: 232 HAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLK 291
+APLAH + + ELEDLS +YL P Y + +++ + + I KE + + LK
Sbjct: 180 YAPLAHRLGIARIKTELEDLSLKYLDPKVYKDIRKKVKATKKERENYIQRVKEPIEKELK 239
Query: 292 TDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEV 351
A +V GR KS +S K+ + EE+ D+ +R+I+K
Sbjct: 240 AHNIEARIV------GRPKSFFSIYNKMKVRNKPFEEIYDLFAIRIIVKRIEE------- 286
Query: 352 GERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRT 411
CY I+ SL+ + R KDYIA PK NGY+SLH + V +GK ++EIQIRT
Sbjct: 287 ----CYYVLGIVHSLYMPVSDRFKDYIATPKINGYQSLHTTI-VGPDGK---MVEIQIRT 338
Query: 412 EEMDMLAVNGTASHAFYKGGL 432
EEM +A +G A+H YK G+
Sbjct: 339 EEMHYMAEDGIAAHWRYKHGI 359
>gi|116510925|ref|YP_808141.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactococcus lactis subsp. cremoris SK11]
gi|125622992|ref|YP_001031475.1| GTP pyrophosphokinase [Lactococcus lactis subsp. cremoris MG1363]
gi|385837104|ref|YP_005874734.1| GTP pyrophosphokinase [Lactococcus lactis subsp. cremoris A76]
gi|389853311|ref|YP_006355555.1| GTP pyrophosphokinase [Lactococcus lactis subsp. cremoris NZ9000]
gi|414073404|ref|YP_006998621.1| GTP pyrophosphokinase / Guanosine-3,5-bis(Diphosphate)
3-pyrophosphohydrolase [Lactococcus lactis subsp.
cremoris UC509.9]
gi|116106579|gb|ABJ71719.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactococcus lactis subsp. cremoris SK11]
gi|124491800|emb|CAL96720.1| GTP pyrophosphokinase [Lactococcus lactis subsp. cremoris MG1363]
gi|300069733|gb|ADJ59133.1| GTP pyrophosphokinase [Lactococcus lactis subsp. cremoris NZ9000]
gi|358748332|gb|AEU39311.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactococcus lactis
subsp. cremoris A76]
gi|413973324|gb|AFW90788.1| GTP pyrophosphokinase / Guanosine-3,5-bis(Diphosphate)
3-pyrophosphohydrolase [Lactococcus lactis subsp.
cremoris UC509.9]
Length = 740
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/341 (32%), Positives = 172/341 (50%), Gaps = 26/341 (7%)
Query: 116 VALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKL 175
VA +LA L++DA +S G L VVE + +++ G A ++ ++ ++
Sbjct: 57 VAGILAKLKLDAVTVSCGFLHDVVEDTNFTQGDLQELFGDEIAEIVDGVTKLGK---VEY 113
Query: 176 QVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAP 234
+ +++ A RK + DIR +++ LA RL MR L +L +Q IS E M+I+AP
Sbjct: 114 KSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRPDKQKRISRETMEIYAP 173
Query: 235 LAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDA 294
LAH + + +ELEDLSFRYL + + + T + L+ +++ L+
Sbjct: 174 LAHRLGIASIKWELEDLSFRYLEEAEFYRIRGLMNEKRTAREALVT----EVIGKLQERV 229
Query: 295 TLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGER 354
A + D + GR K YS +K+ + +E+ D++ +R I + +S++
Sbjct: 230 EKAGV--DAEIYGRPKHIYSIYRKMHDKKKRFDEIYDLIAIRCITETTSDV--------- 278
Query: 355 ACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEM 414
YTT I LWK MP R KDYIA PKANGY+S+H V G P ME QIRT EM
Sbjct: 279 --YTTLGYIHDLWKPMPGRFKDYIANPKANGYQSVHTTV----YGPKGP-MEFQIRTREM 331
Query: 415 DMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALR 455
+A G A+H YK G+ + + + + EL LR
Sbjct: 332 HQIAEYGVAAHWAYKQGIKSKVDVHEISETLNWIHELVELR 372
>gi|359790208|ref|ZP_09293117.1| GTP pyrophosphokinase [Mesorhizobium alhagi CCNWXJ12-2]
gi|359253888|gb|EHK56965.1| GTP pyrophosphokinase [Mesorhizobium alhagi CCNWXJ12-2]
Length = 741
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/332 (32%), Positives = 165/332 (49%), Gaps = 35/332 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ L VA +L ++ MD I+ LL +E + Q++ + G L+ ++K
Sbjct: 46 FSHPLEVAAILTEMHMDEATIAVALLHDTIEDTTATRQEIDELFGPDLGKLVEGLTKLKK 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L L E A LRK L D+R L++ LA RL MR LD++P ++L I+ E
Sbjct: 106 ---LDLVSKKAEQAENLRKLLLAISEDVRVLLVKLADRLHNMRTLDHVPDAKRLRIAEET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLA + + ELE+L+FRY+ P +Y T ++ L DI+K
Sbjct: 163 MEIYAPLAGRMGMQGMREELEELAFRYINPDAY----------RTVTERLADIFKRNRGV 212
Query: 289 CLKTDATLADLVEDVSVQGRYKSR----YSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSN 344
+ + +L+ L E S++ KSR +S +K+ E+++D+ G RVI+ +
Sbjct: 213 VEEIEKSLSGLFEKHSIEAVVKSRQKKPWSVFRKMEAKALSFEQLSDIFGFRVIVGTVED 272
Query: 345 LVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPL 404
CY I + W +P R KDYI+ PK N YRS+H + G +R
Sbjct: 273 -----------CYRALGAIHTTWSMVPGRFKDYISTPKQNDYRSIHTTI----VGPSRQR 317
Query: 405 MEIQIRTEEMDMLAVNGTASHAFYK--GGLTN 434
+E+QIRT EM+ +A G A HA YK GG N
Sbjct: 318 IELQIRTREMNKVAEYGVAVHALYKDTGGKVN 349
>gi|377556073|ref|ZP_09785796.1| GTP pyrophosphokinase [Lactobacillus gastricus PS3]
gi|376168811|gb|EHS87539.1| GTP pyrophosphokinase [Lactobacillus gastricus PS3]
Length = 744
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 162/326 (49%), Gaps = 23/326 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +LA L MD E + AG + VVE G ++ + G A ++ ++
Sbjct: 51 IVHPIQVAGILAKLHMDPETVCAGYMHDVVEDTGATLDDIEVLFGRTIALIIDGDTKISK 110
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + ++ A RK L DIR +I+ LA RL MR LD L +Q IS E
Sbjct: 111 ---IHYKSNREQMAETHRKLLLAMSQDIRVMIVKLADRLHNMRTLDSLREEKQKRISRET 167
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A + + + +ELEDLS RY+ P Y + + S ID ++
Sbjct: 168 LEIYAPIADRLGISTMKWELEDLSLRYIDPEQYYTIVHLMHSRREQRVDYID----HAIE 223
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
++ +L +V + GR K YS +K++ + E+ D+L +RV++ +
Sbjct: 224 VVQKAVDELNLQGNVEIYGRPKHIYSIYRKMVNKHKQFSEIYDLLAIRVVVDTVPD---- 279
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY I + WK MP R KDYIA PK NGY+SLH V + G+ PL EIQ
Sbjct: 280 -------CYAVLGAIHTNWKPMPGRFKDYIAMPKVNGYQSLHTTV-IGPGGQ--PL-EIQ 328
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTN 434
IRT EM +A G A+H YK G T+
Sbjct: 329 IRTHEMHEVAEFGVAAHWAYKEGKTD 354
>gi|420144910|ref|ZP_14652389.1| GTP pyrophosphokinase [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
gi|398403467|gb|EJN56709.1| GTP pyrophosphokinase [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
Length = 746
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 161/319 (50%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD +++G L VVE +++ +++ G A ++ ++ +
Sbjct: 55 IQVAAILAELKMDPATVASGFLHDVVEDTNITLGDIQELFGHDVAVIVDGVTKLSK---I 111
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K DE A RK L D+R +++ LA RL MR L +L +Q I+ E ++I+
Sbjct: 112 KYVAHKDELAENHRKMILAMAKDLRVVMVKLADRLHNMRTLKHLRPEKQRRIANETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + +ELED + RYL P Y + + S + ID +Q+
Sbjct: 172 APLADRLGISQFKWELEDTALRYLNPQQYYRIVHLMNSKRAQRQAYIDEAIKQI------ 225
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
A++ D + GR K YS KK+ + EE+ D+L +RVI+ +
Sbjct: 226 KASMTDFNIKYEIYGRPKHIYSIYKKMRDKHKQFEEIYDLLAIRVIVDTIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKAN Y+SLH V K +PL EIQIRTE
Sbjct: 278 ---CYAVLGAIHTKWKPMPGRFKDYIAMPKANMYQSLHTTV---IGPKGQPL-EIQIRTE 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 331 EMHQVAEYGVAAHWAYKEG 349
>gi|333394996|ref|ZP_08476815.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus coryniformis subsp. coryniformis KCTC
3167]
gi|336392924|ref|ZP_08574323.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus coryniformis subsp. torquens KCTC 3535]
Length = 746
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 161/319 (50%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD +++G L VVE +++ +++ G A ++ ++ +
Sbjct: 55 IQVAAILAELKMDPATVASGFLHDVVEDTNITLGDIQELFGHDVAVIVDGVTKLSK---I 111
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K DE A RK L D+R +++ LA RL MR L +L +Q I+ E ++I+
Sbjct: 112 KYVAHKDELAENHRKMILAMAKDLRVVMVKLADRLHNMRTLKHLRPEKQRRIANETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + +ELED + RYL P Y + + S + ID +Q+
Sbjct: 172 APLADRLGISQFKWELEDTALRYLNPQQYYRIVHLMNSKRAQRQAYIDEAIKQI------ 225
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
A++ D + GR K YS KK+ + EE+ D+L +RVI+ +
Sbjct: 226 KASMTDFNIKYEIYGRPKHIYSIYKKMRDKHKQFEEIYDLLAIRVIVDTIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKAN Y+SLH V K +PL EIQIRTE
Sbjct: 278 ---CYAVLGAIHTKWKPMPGRFKDYIAMPKANMYQSLHTTV---IGPKGQPL-EIQIRTE 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 331 EMHQVAEYGVAAHWAYKEG 349
>gi|312792967|ref|YP_004025890.1| (p)ppgpp synthetase i, spot/rela [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180107|gb|ADQ40277.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 726
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/370 (32%), Positives = 177/370 (47%), Gaps = 34/370 (9%)
Query: 68 FNELTERMNVLSSSSS-RLLFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMD 126
NEL E++ +S L+ KA + + + + L VAL+LADL++D
Sbjct: 9 LNELIEKVKKYASEEDINLIKKAFEFA-QKYHDGQVRSSGEPYIVHPLEVALILADLELD 67
Query: 127 AEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAAL 186
I AGLL VVE S++ V G A L+ ++ L+ + A
Sbjct: 68 IASIVAGLLHDVVEDTSASLEDVEREFGKEIAELVDGVTKLGK---LEFTSKLERQAENY 124
Query: 187 RKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLS 245
RK + DIR +++ LA RL MR L YLP +Q + E + I+APLAH + + +
Sbjct: 125 RKMLIAMAKDIRVILIKLADRLHNMRTLKYLPPEKQRQKAQETIDIYAPLAHRLGISKIK 184
Query: 246 FELEDLSFRYLFPFSYL-FVDTWLRS---HETGSKPLIDIYKEQLLQCLKTDATLADLVE 301
+ELEDLS RYL P Y V+ + E K +I + E+L + +E
Sbjct: 185 WELEDLSLRYLDPEGYYDLVEKIAKKRVEREEYIKKIISLISEKLKEA---------NIE 235
Query: 302 DVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTRE 361
+ GR K YS +K+ + G+ EE+ D+ +R+I+ + CY
Sbjct: 236 VGQIDGRPKHFYSIYRKMKEQGKTLEEIYDLFAIRIIVNSVKD-----------CYGVLG 284
Query: 362 IIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNG 421
II +L+K MP R KDYIA PK N Y+SLH V + G+ E+QIRT +M A G
Sbjct: 285 IIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPEGEP---FEVQIRTFDMHRTAEYG 340
Query: 422 TASHAFYKGG 431
A+H YK G
Sbjct: 341 IAAHWKYKEG 350
>gi|76797936|ref|ZP_00780197.1| (p)ppGpp synthetase [Streptococcus agalactiae 18RS21]
gi|76586710|gb|EAO63207.1| (p)ppGpp synthetase [Streptococcus agalactiae 18RS21]
Length = 485
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 168/322 (52%), Gaps = 26/322 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL +DA ++ G L VVE +++ ++ G ++ ++ +
Sbjct: 55 IQVAGILADLHLDAVTVACGFLHDVVEDTEITLDEIETDFGKDVRDIIDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E M+I+
Sbjct: 112 EYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELEDLSFRYL + + + + L+DI +++ +
Sbjct: 172 APLAHRLGISRIKWELEDLSFRYLNETEFYKISHMMSEKRREREELVDIIVDKIRSYTEE 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
D + GR K YS +K+ + +++ D++ +R I++ +S++
Sbjct: 232 QGLYGD------IYGRPKHIYSIYRKMRDKKKRFDQIYDLIAIRCIMETASDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQIRT+
Sbjct: 279 ----YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQIRTK 329
Query: 413 EMDMLAVNGTASHAFYKGGLTN 434
EM +A G A+H YK G+T+
Sbjct: 330 EMHQVAEFGVAAHWAYKKGITS 351
>gi|398311619|ref|ZP_10515093.1| GTP pyrophosphokinase RelA/SpoT [Bacillus mojavensis RO-H-1]
Length = 734
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/326 (33%), Positives = 168/326 (51%), Gaps = 25/326 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL+MD I+ G L VVE V++ +++ A L+ ++ +
Sbjct: 55 IQVAGILVDLEMDPSTIAGGFLHDVVEDTDVTLDDLKEAFSEEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP+ +Q IS E ++I
Sbjct: 112 KYKSQEEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ ++Y ++++ +K
Sbjct: 172 APLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAER----ELYVDEVVNEVKK 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
++ D S GR K YS +K++ + E+ D+L +R+ LVN+
Sbjct: 228 RVEEVNIKADFS--GRPKHIYSIYRKMVLQNKQFNEIYDLLAVRI-------LVNSI--- 275
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY II + WK MP R KDYIA PK N Y+SLH V + G PL E+QIRT
Sbjct: 276 -KDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGD--PL-EVQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEA 438
EM +A G A+H YK G E A
Sbjct: 331 EMHEIAEYGVAAHWAYKEGKAASESA 356
>gi|415885635|ref|ZP_11547563.1| GTP diphosphokinase [Bacillus methanolicus MGA3]
gi|387591304|gb|EIJ83623.1| GTP diphosphokinase [Bacillus methanolicus MGA3]
Length = 731
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 164/319 (51%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL+MD ++AG L V+E V+++++R+ A L+ ++ +
Sbjct: 55 IQVAGILADLEMDPITVAAGFLHDVIEDTDVTLEEMREAFNDEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP +Q IS E ++I
Sbjct: 112 KYKSHEEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPLEKQRRISNETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ + +D E++ L
Sbjct: 172 APLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAEREQYLDDVIEEVRNRLNE 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ A+ + GR K YS +K+ + E+ D+L +R+++ +
Sbjct: 232 VSIKAE------ISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRIVVNSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PK N Y+SLH V + G PL E+QIRT
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGD--PL-EVQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 331 EMHRIAEYGIAAHWAYKEG 349
>gi|344996822|ref|YP_004799165.1| (p)ppGpp synthetase I SpoT/RelA [Caldicellulosiruptor lactoaceticus
6A]
gi|343965041|gb|AEM74188.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor
lactoaceticus 6A]
Length = 726
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/370 (32%), Positives = 177/370 (47%), Gaps = 34/370 (9%)
Query: 68 FNELTERMNVLSSSSS-RLLFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMD 126
NEL E++ +S L+ KA + + + + L VAL+LADL++D
Sbjct: 9 LNELIEKVKKYASEEDINLIKKAFEFA-QKYHDGQVRSSGEPYIVHPLEVALILADLELD 67
Query: 127 AEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAAL 186
I AGLL VVE S++ V G A L+ ++ L+ + A
Sbjct: 68 IASIVAGLLHDVVEDTSASLEDVEREFGKEIAELVDGVTKLGK---LEFTSKLERQAENY 124
Query: 187 RKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLS 245
RK + DIR +++ LA RL MR L YLP +Q + E + I+APLAH + + +
Sbjct: 125 RKMLIAMAKDIRVILIKLADRLHNMRTLKYLPPEKQRQKAQETIDIYAPLAHRLGISKIK 184
Query: 246 FELEDLSFRYLFPFSYL-FVDTWLRS---HETGSKPLIDIYKEQLLQCLKTDATLADLVE 301
+ELEDLS RYL P Y V+ + E K +I + E+L + +E
Sbjct: 185 WELEDLSLRYLDPEGYYDLVEKIAKKRVEREEYIKKIISLISEKLKEA---------NIE 235
Query: 302 DVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTRE 361
+ GR K YS +K+ + G+ EE+ D+ +R+I+ + CY
Sbjct: 236 VGQIDGRPKHFYSIYRKMKEQGKTLEEIYDLFAIRIIVNSVKD-----------CYGVLG 284
Query: 362 IIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNG 421
II +L+K MP R KDYIA PK N Y+SLH V + G+ E+QIRT +M A G
Sbjct: 285 IIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPEGEP---FEVQIRTFDMHRTAEYG 340
Query: 422 TASHAFYKGG 431
A+H YK G
Sbjct: 341 IAAHWKYKEG 350
>gi|187918071|ref|YP_001883634.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Borrelia
hermsii DAH]
gi|119860919|gb|AAX16714.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Borrelia
hermsii DAH]
Length = 667
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 176/356 (49%), Gaps = 43/356 (12%)
Query: 84 RLLFKALKLSIPMLQSLPLSPDSRSP-LTKALSVALLLADLQMDAEVISAGLLRQVVESG 142
+L+FKAL++S + +S+ P + + VAL L Q+D + I AGLL V+E
Sbjct: 38 KLIFKALEISEQL--HYGQYRESKEPYIIHPIMVALFLIKFQLDFKTIIAGLLHDVLEDT 95
Query: 143 GVSIQQVRDRI---------GIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRKFCLTY 193
V +++ G+ H LH R N ++ F +T+
Sbjct: 96 SVKKEEIIKEFDQEVLSLIDGVTKIHDLHNKTRAIKEANTISKMF----------FAMTH 145
Query: 194 YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSF 253
DIR +I+ LA +L M L +LP+ ++ I+ + + + P+A + + L LEDLS
Sbjct: 146 -DIRIIIIKLADKLHNMATLSHLPKNRRERIARDCLATYVPIAERLGISSLKIYLEDLSL 204
Query: 254 RYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRY 313
+YL+P Y + +L + + + +YK +L+ + L + DV + R K Y
Sbjct: 205 KYLYPKEYKEIKNFLSATKIEREK--KLYKGKLI----IEKELKKIGIDVVITVRSKHFY 258
Query: 314 STMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHR 373
S +K+ ++ D LG+R+I K ++ CY EI+ +WK +P R
Sbjct: 259 SIFRKMKTRNNNIAQIFDTLGIRIICKK-----------QKECYEILEIVHKVWKPIPGR 307
Query: 374 TKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYK 429
KDYIA PK N Y+SLH V + ++ + L+EIQIRTEEMD +A G A+H YK
Sbjct: 308 LKDYIAIPKENKYQSLHTTVRIPEDNQ---LIEIQIRTEEMDRIAKYGVAAHWLYK 360
>gi|308174461|ref|YP_003921166.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens DSM 7]
gi|307607325|emb|CBI43696.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus amyloliquefaciens DSM
7]
Length = 734
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 166/326 (50%), Gaps = 25/326 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL+MD I+ G L VVE V++ +++ A L+ ++ +
Sbjct: 55 IQVAGILVDLEMDPSTIAGGFLHDVVEDTDVTLDDLKEAFSEEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP+ +Q IS E ++I
Sbjct: 112 KYKSQEEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ ++Y ++++ +K
Sbjct: 172 APLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAER----ELYVDEVVNEVKK 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
++ D S GR K YS +K+ + E+ D+L +R+++ +
Sbjct: 228 RVEEVNIKADFS--GRPKHIYSIYRKMALQNKQFNEIYDLLAVRILVGSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PK N Y+SLH V + G PL E+QIRT
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGD--PL-EVQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEA 438
EM +A G A+H YK G EEA
Sbjct: 331 EMHEIAEYGVAAHWAYKEGKAANEEA 356
>gi|452994812|emb|CCQ93581.1| GTP pyrophosphokinase (RelA/SpoT) [Clostridium ultunense Esp]
Length = 721
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 164/323 (50%), Gaps = 33/323 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+VA++LADL MD I AGLL V+E VS + + G A+L+ ++K
Sbjct: 48 FNVAMILADLNMDGTTIVAGLLHDVLEDTSVSYETLVKEFGEEVANLVDGVTKLKKLKYK 107
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
Q + A LRK + DIR +I+ LA RL MR L+Y+ ++ +LE ++I+
Sbjct: 108 TKQ---ESQAENLRKMVMAMAKDIRVIIIKLADRLHNMRTLEYMSEEKKKEKALETLEIY 164
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYL----FVDTWLRSHETGSKPLIDIYKEQLLQ 288
APLAH + + + +ELEDLS RYL P Y V + E + +ID E+L +
Sbjct: 165 APLAHRLGISKIKWELEDLSLRYLDPEGYYDLVDKVSKRRKEREAYIQRIIDEIDEKLEE 224
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
++ D+S GR KS YS KK++ + E++ D+ +RVI+ +
Sbjct: 225 M--------NIFRDIS--GRPKSFYSIYKKMVYQNKSFEQIFDLTAIRVIVDTIKD---- 270
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY I+ ++WK +P R KDYIA PK N Y+SLH V G + E+Q
Sbjct: 271 -------CYGVLGIVHTMWKPIPGRFKDYIAMPKPNMYQSLHTTV----IGPEGEIFEVQ 319
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IRT +M A G A+H YK G
Sbjct: 320 IRTWDMHRTAEYGIAAHWKYKEG 342
>gi|374709317|ref|ZP_09713751.1| (p)ppGpp synthetase I SpoT/RelA [Sporolactobacillus inulinus CASD]
Length = 724
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 161/319 (50%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L L MD I +G L VVE V++ +R + G A L+ +++N
Sbjct: 49 IEVAGILVQLNMDVTTIVSGFLHDVVEDTRVTLDDIRVKFGDNVAELVDGVTKLRN---F 105
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ +D+ A RK F D+R +I+ LA RL MR L Y+ +Q+ + E ++I+
Sbjct: 106 EYTSKEDQQAENHRKMFVAMARDLRCVIVKLADRLHNMRTLKYMRHEKQIQKANETLEIY 165
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA+ + + + +ELED+S RYL P Y + ++ + I E L +K+
Sbjct: 166 APLANRLGISAIKWELEDISLRYLKPQQYYKIVNLMKQKREEREAYIAKVVEDLKAYVKS 225
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
A+ V GR K YS +K++ + E+ D+ +R+I+K +
Sbjct: 226 VHIPAE------VSGRPKHIYSIYRKMVNQHKQFNEIYDLFAVRIIVKTIKD-------- 271
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PK N Y+SLH V + G PL E+QIRTE
Sbjct: 272 ---CYAILGIIHTHWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGD--PL-EVQIRTE 324
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 325 EMHDVAEYGIAAHWAYKEG 343
>gi|330466917|ref|YP_004404660.1| RelA/SpoT family protein [Verrucosispora maris AB-18-032]
gi|328809888|gb|AEB44060.1| RelA/SpoT family protein [Verrucosispora maris AB-18-032]
Length = 823
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 168/321 (52%), Gaps = 27/321 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LA+L MD + A LL +E ++ Q+R G G LL + + +
Sbjct: 142 ITHPLAVATILANLGMDTTTLVAALLHDTIEDTEYTLDQMRTDFG-GEVALLVDGVTKLD 200
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
V L D A +RK + D R L++ LA RL MR L +LPR +Q + E
Sbjct: 201 KVKLG----DAAKAETIRKMVVAMAKDPRVLVIKLADRLHNMRTLTFLPRPKQEQKAKET 256
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I APLAH + N + +ELEDL+F LFP + ++ + H+ + L+ Q+ Q
Sbjct: 257 LEILAPLAHRLGMNTIKWELEDLAFGTLFPKRFEEINRLIGEHQPQREALL----RQVTQ 312
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
++TD A + + + GR K YS +K++ GR ++ D++G+R+ LV+T
Sbjct: 313 KVQTDLKAAKIKAETT--GRPKHLYSIYQKMIVRGRDFNDIYDLVGVRI-------LVDT 363
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY +I + W+ +P R KDYIA PK N Y+SLH V + GK +E+Q
Sbjct: 364 V----RDCYAALGVIHANWQPVPGRFKDYIAMPKFNMYQSLHTTV-IGPTGKP---VEMQ 415
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT M A G A+H YK
Sbjct: 416 IRTYAMHRTAEFGIAAHWKYK 436
>gi|309781793|ref|ZP_07676526.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Ralstonia
sp. 5_7_47FAA]
gi|308919434|gb|EFP65098.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Ralstonia
sp. 5_7_47FAA]
Length = 787
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 192/395 (48%), Gaps = 32/395 (8%)
Query: 48 SPAPLPSTAGEKMVVKLVGAFNELTERMNVLSSSSSRLLFKALKLSIPMLQSLPLSPDSR 107
P P+ + VV + G LTE+++ L + +L+ +A S L S
Sbjct: 56 GPTSQPAAPPRQQVVSISG----LTEKLSYLKPADLKLVKEAFHFSDEA--HLGQYRQSG 109
Query: 108 SP-LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLR 166
P +T ++VA + A ++D + I A LL V+E GV+ ++ ++ G A L+ +
Sbjct: 110 EPYITHPVAVAEICAGWKLDVQSIMAALLHDVIEDQGVTKSELAEKFGPKVAELVDGLTK 169
Query: 167 VKNNVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMIS 225
+ L+ Q + A + RK L D+R +++ LA R MR LD++P ++ I+
Sbjct: 170 LDK---LEFQSREQAQAESFRKMLLAMARDVRVILVKLADRTHNMRTLDHVPPEKRRRIA 226
Query: 226 LEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQ 285
E M+I+AP+AH + N EL++LSFR PF Y ++ +++ + ++ E
Sbjct: 227 GETMEIYAPIAHRLGLNTTYRELQELSFRIGSPFRYATLEKAVKAARGNRREVVSRILET 286
Query: 286 LLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNL 345
+ L TDA + + GR K+ YS +K+ +V DV G RV++
Sbjct: 287 AQRAL-TDAGIP-----AEMTGREKTLYSIYRKMHDKQLSFSQVLDVYGFRVVVDTQMQ- 339
Query: 346 VNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLM 405
CY T + SL+K MP + KDYIA PK NGY+SLH + G +
Sbjct: 340 ----------CYMTMGALHSLYKPMPGKFKDYIAIPKINGYQSLHTTL----VGPFGTPV 385
Query: 406 EIQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKR 440
E QIRT EM+ +A G A+H YK P+ A++
Sbjct: 386 EFQIRTREMNQIAEAGVAAHWMYKQHHDEPDRAQQ 420
>gi|374313164|ref|YP_005059594.1| (p)ppGpp synthetase I SpoT/RelA [Granulicella mallensis MP5ACTX8]
gi|358755174|gb|AEU38564.1| (p)ppGpp synthetase I, SpoT/RelA [Granulicella mallensis MP5ACTX8]
Length = 832
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 169/319 (52%), Gaps = 27/319 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L VA +LA+L+MD+ I+AGLL VE V+ +++ R G AH++ ++ +
Sbjct: 144 LEVAQVLAELKMDSTAIAAGLLHDAVEDTDVTPEEIAKRFGEQVAHIVEGVTKLDK---I 200
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K +D A +RK L D+R +I+ LA RL MR L++L +Q I+ E ++I+
Sbjct: 201 KFANREDHQAENIRKMLLAMVTDVRVVIIKLADRLHNMRTLEHLKPEKQQRIARETLEIY 260
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + L ELEDL+FRY PF Y + T + S + + +++ L+
Sbjct: 261 APLAHRLGMGKLRGELEDLAFRYTDPFQYTQLTTEVDSLRGEGEAFL----HRIVSTLEA 316
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIP-EEVNDVLGLRVIIKPSSNLVNTSEV 351
A++ + V+ R K YS +KL +IP ++V D+ +RVI +
Sbjct: 317 KLREANI--NARVESRIKRLYSIQQKLTAH-QIPVDQVYDLFAIRVITQT---------- 363
Query: 352 GERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRT 411
E+ CY ++ S W+ +P R KD+IA P+ N Y+SLH + +++ E+QIRT
Sbjct: 364 -EQDCYAALGLLHSTWRPVPGRFKDFIAMPRPNMYQSLHTTL-IAEGAHQ---FEVQIRT 418
Query: 412 EEMDMLAVNGTASHAFYKG 430
E+M +A G A+H YK
Sbjct: 419 EDMHQVAEEGIAAHWKYKA 437
>gi|406710270|ref|YP_006764996.1| GTP pyrophosphokinase [Streptococcus agalactiae GD201008-001]
gi|424048660|ref|ZP_17786211.1| GTP pyrophosphokinase [Streptococcus agalactiae ZQ0910]
gi|389649915|gb|EIM71389.1| GTP pyrophosphokinase [Streptococcus agalactiae ZQ0910]
gi|406651155|gb|AFS46556.1| GTP pyrophosphokinase [Streptococcus agalactiae GD201008-001]
Length = 738
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 168/322 (52%), Gaps = 26/322 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL +DA ++ G L VVE +++ ++ G ++ ++ +
Sbjct: 55 IQVAGILADLHLDAVTVACGFLHDVVEDTEITLDEIETDFGKDVRDIIDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ +A RL MR L +L + +Q IS E M+I+
Sbjct: 112 EYKSHEEQLAENHRKMLMAMSKDIRVILVKIADRLHNMRTLKHLRKDKQERISRETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELEDLSFRYL + + + + L+DI +++ +
Sbjct: 172 APLAHRLGISRIKWELEDLSFRYLNETEFYKISHMMSEKRREREELVDIIVDKIRSYTEE 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
D + GR K YS +K+ + +++ D++ +R I++ +S++
Sbjct: 232 QGLYGD------IYGRPKHIYSIYRKMRDKKKRFDQIYDLIAIRCIMETASDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQIRT+
Sbjct: 279 ----YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQIRTK 329
Query: 413 EMDMLAVNGTASHAFYKGGLTN 434
EM +A G A+H YK G+T+
Sbjct: 330 EMHQVAEFGVAAHWAYKKGITS 351
>gi|384160293|ref|YP_005542366.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus amyloliquefaciens
TA208]
gi|384169371|ref|YP_005550749.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens XH7]
gi|328554381|gb|AEB24873.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus amyloliquefaciens
TA208]
gi|341828650|gb|AEK89901.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens XH7]
Length = 734
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 166/326 (50%), Gaps = 25/326 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL+MD I+ G L VVE V++ +++ A L+ ++ +
Sbjct: 55 IQVAGILVDLEMDPSTIAGGFLHDVVEDTDVTLDDLKEAFSEEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP+ +Q IS E ++I
Sbjct: 112 KYKSQEEQQAENHRKIFVAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ ++Y ++++ +K
Sbjct: 172 APLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAER----ELYVDEVVNEVKK 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
++ D S GR K YS +K+ + E+ D+L +R+++ +
Sbjct: 228 RVEEVNIKADFS--GRPKHIYSIYRKMALQNKQFNEIYDLLAVRILVGSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PK N Y+SLH V + G PL E+QIRT
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGD--PL-EVQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEA 438
EM +A G A+H YK G EEA
Sbjct: 331 EMHEIAEYGVAAHWAYKEGKAANEEA 356
>gi|258515502|ref|YP_003191724.1| (p)ppGpp synthetase I SpoT/RelA [Desulfotomaculum acetoxidans DSM
771]
gi|257779207|gb|ACV63101.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum acetoxidans DSM
771]
Length = 727
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 171/319 (53%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA +LADL++D E ++ LL VVE +++Q + G A LL + + + ++
Sbjct: 47 LAVAKILADLELDIEALAGALLHDVVEDTEITLQDIEKDFGSEVA-LLVDGVTKLSKIDF 105
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + ++ A LRK F DIR +++ LA RL +R L P +Q I+LE ++I
Sbjct: 106 KSK--EEHQAENLRKMFLAMAKDIRVILIKLADRLHNLRTLGAQPEAKQKEIALETLEIF 163
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + +L +E+EDL+FR+L P Y + + +T +K DI ++++ LK
Sbjct: 164 APLAHRLGIYHLKWEIEDLAFRFLQPSKYYELAD--KVAKTRNKREEDI--NEIIEVLKK 219
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
D+ +QGR K YS +K+ + + ++ D++ +RV + +
Sbjct: 220 --KFIDVGIKADIQGRPKHLYSIYEKMQRQKKDFAQILDIMAVRVTVDTVKD-------- 269
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY T I+ +LWK +P R KDYIA PK+N Y+SLH V + +G EIQ+RT
Sbjct: 270 ---CYGTLGIVHTLWKPIPGRFKDYIAMPKSNMYQSLHTTV-IGPHGDP---FEIQMRTW 322
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM A G A+H YK G
Sbjct: 323 EMHRTAEYGIAAHWCYKEG 341
>gi|384165231|ref|YP_005546610.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus amyloliquefaciens LL3]
gi|328912786|gb|AEB64382.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus amyloliquefaciens LL3]
Length = 734
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 166/326 (50%), Gaps = 25/326 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL+MD I+ G L VVE V++ +++ A L+ ++ +
Sbjct: 55 IQVAGILVDLEMDPSTIAGGFLHDVVEDTDVTLDDLKEAFSEEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP+ +Q IS E ++I
Sbjct: 112 KYKSQEEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ ++Y ++++ +K
Sbjct: 172 APLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAER----ELYVDEVVNEVKK 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
++ D S GR K YS +K+ + E+ D+L +R+++ +
Sbjct: 228 RVEEVNIKADFS--GRPKHIYSIYRKMALQNKQFNEIYDLLAVRILVGSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PK N Y+SLH V + G PL E+QIRT
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGD--PL-EVQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEA 438
EM +A G A+H YK G EEA
Sbjct: 331 EMHEIAEYGVAAHWAYKEGKAANEEA 356
>gi|331697364|ref|YP_004333603.1| (p)ppGpp synthetase I SpoT/RelA [Pseudonocardia dioxanivorans
CB1190]
gi|326952053|gb|AEA25750.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudonocardia dioxanivorans
CB1190]
Length = 821
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/325 (33%), Positives = 168/325 (51%), Gaps = 35/325 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LA+L MD + A LL VE S++++R G AHL+ ++
Sbjct: 135 ITHPLAVATILAELGMDTTTLVAALLHDTVEDTDYSLERLRTDFGDEVAHLVDGVTKLD- 193
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
K++ A +RK + D R L++ L+ RL MR + +LP +Q + E
Sbjct: 194 ----KVEFGTAAEAETIRKMVVAMARDPRVLVIKLSDRLHNMRTMRFLPPEKQAKKARET 249
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSY----LFVDTWLRSHETGSKPLIDIYKE 284
+++ APLAH + + +ELEDLSF L P Y V T S +T K +ID +
Sbjct: 250 LEVMAPLAHRLGMATVKWELEDLSFAILHPKKYEEIVRLVATRAPSRDTYLKQVIDEVMQ 309
Query: 285 QLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSN 344
QL T +V+GR K YS +K++ GR ++++D++G+RV++
Sbjct: 310 QLEGARIT----------ATVEGRPKHYYSIYRKMIVKGRDFDDIHDLVGVRVLV----- 354
Query: 345 LVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPL 404
EV R CY ++ +LW+ MP R KDYIA+P+ Y+SLH V + +GK
Sbjct: 355 ----DEV--RDCYAAMGMVHALWQPMPGRFKDYIAQPRFGVYQSLHTTV-IGPDGKP--- 404
Query: 405 MEIQIRTEEMDMLAVNGTASHAFYK 429
+E+QIRT EM A G A+H YK
Sbjct: 405 LEVQIRTREMHRTAEFGIAAHWRYK 429
>gi|398307316|ref|ZP_10510902.1| RelA/SpoT family protein [Bacillus vallismortis DV1-F-3]
Length = 734
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/326 (34%), Positives = 167/326 (51%), Gaps = 25/326 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL+MD I+ G L VVE V++ +++ A L+ ++ +
Sbjct: 55 IQVAGILVDLEMDPSTIAGGFLHDVVEDTDVTLDDLKEAFSEEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP+ +Q IS E ++I
Sbjct: 112 KYKSQEEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ ++Y E+++ +K
Sbjct: 172 APLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAER----ELYVEEVVNEVKK 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ D S GR K YS +K++ + E+ D+L +R+ LVN+
Sbjct: 228 RVEEVHIKADFS--GRPKHIYSIYRKMVLQNKQFNEIYDLLAVRI-------LVNSI--- 275
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY II + WK MP R KDYIA PK N Y+SLH V + G PL E+QIRT
Sbjct: 276 -KDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGD--PL-EVQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEA 438
EM +A G A+H YK G E A
Sbjct: 331 EMHEIAEYGVAAHWAYKEGKAASEGA 356
>gi|187929353|ref|YP_001899840.1| (p)ppGpp synthetase I SpoT/RelA [Ralstonia pickettii 12J]
gi|404396547|ref|ZP_10988341.1| RelA/SpoT family protein [Ralstonia sp. 5_2_56FAA]
gi|187726243|gb|ACD27408.1| (p)ppGpp synthetase I, SpoT/RelA [Ralstonia pickettii 12J]
gi|348613637|gb|EGY63216.1| RelA/SpoT family protein [Ralstonia sp. 5_2_56FAA]
Length = 806
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 193/395 (48%), Gaps = 32/395 (8%)
Query: 48 SPAPLPSTAGEKMVVKLVGAFNELTERMNVLSSSSSRLLFKALKLSIPMLQSLPLSPDSR 107
P P+ + VV + G LTE+++ L + +L+ +A S L S
Sbjct: 75 GPTSQPAAPPRQQVVSISG----LTEKLSYLKPADLKLVKEAFHFSDEA--HLGQYRQSG 128
Query: 108 SP-LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLR 166
P +T ++VA + A ++D + I A LL V+E GV+ ++ ++ G A L+ +
Sbjct: 129 EPYITHPVAVAEICAGWKLDVQSIMAALLHDVIEDQGVTKSELAEKFGPKVAELVDGLTK 188
Query: 167 VKNNVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMIS 225
+ L+ Q + A + RK L D+R +++ LA R MR LD++P ++ I+
Sbjct: 189 LDK---LEFQSREQAQAESFRKMLLAMARDVRVILVKLADRTHNMRTLDHVPPEKRRRIA 245
Query: 226 LEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQ 285
E M+I+AP+AH + N EL++LSFR PF Y ++ +++ + ++ E
Sbjct: 246 GETMEIYAPIAHRLGLNTTYRELQELSFRIGSPFRYATLEKAVKAARGNRREVVSRILET 305
Query: 286 LLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNL 345
+ L TDA + + GR K+ YS +K+ +V DV G RV++
Sbjct: 306 AQRAL-TDAGIP-----AEMTGREKTLYSIYRKMHDKQLSFSQVLDVYGFRVVVDT---- 355
Query: 346 VNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLM 405
+ CY T + SL+K MP + KDYIA PK NGY+SLH + G +
Sbjct: 356 -------QMQCYMTMGALHSLYKPMPGKFKDYIAIPKINGYQSLHTTL----VGPFGTPV 404
Query: 406 EIQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKR 440
E QIRT EM+ +A G A+H YK P+ A++
Sbjct: 405 EFQIRTREMNQIAEAGVAAHWMYKQHHDEPDRAQQ 439
>gi|291542892|emb|CBL16002.1| (p)ppGpp synthetase, RelA/SpoT family [Ruminococcus bromii L2-63]
Length = 732
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/380 (31%), Positives = 184/380 (48%), Gaps = 41/380 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+SVA ++A+L MD + + LL VE GV++++V G A L+ ++ +
Sbjct: 60 VSVACIVAELGMDTDSVCGALLHDTVEDTGVTLEEVTKLFGADVAKLIDGVTKISK---I 116
Query: 174 KLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + A +RK + D IR +I+ LA RL MR ++ +P ++ SLE M++
Sbjct: 117 PYSTREQQQAENIRKMLIAMADDIRVIIIKLADRLHNMRTMNCMPEQKRRDKSLENMQVF 176
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+AH + + ELED S +YL P Y ++ L E G I+ K Q+L KT
Sbjct: 177 APIAHRLGIKTIKDELEDRSLQYLDPIGYKEIEDDLLMTEEGRDKFIESIKNQILA--KT 234
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ T+ V + GR KS S +K G+ +++ D+ +RVI+ S+
Sbjct: 235 EGTIP----GVYISGRVKSINSIYRKTYMQGKTMDQIFDIFAVRVIVDTVSD-------- 282
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ ++K +P+R KDYI+ PK N Y+SLH V K EIQIRT
Sbjct: 283 ---CYNVLGVVHDIFKPIPNRFKDYISMPKPNMYQSLHTTV----LDKNAIPFEIQIRTW 335
Query: 413 EMDMLAVNGTASHAFYK-----GGLTN---PEEAKRLKAIMLAAAELAALRLKDIPS--- 461
EM A G A+H YK GG N E K++K ++L +L A + DI
Sbjct: 336 EMHYTAEYGIAAHWKYKLGMGAGGKNNDKMEENIKKVKDMIL--DQLEAEDVTDIAKNIR 393
Query: 462 ---TNHKGFEFDWRDRVFRL 478
T + + F R VF L
Sbjct: 394 NDFTENDVYVFSPRGDVFNL 413
>gi|195953734|ref|YP_002122024.1| (p)ppGpp synthetase I SpoT/RelA [Hydrogenobaculum sp. Y04AAS1]
gi|195933346|gb|ACG58046.1| (p)ppGpp synthetase I, SpoT/RelA [Hydrogenobaculum sp. Y04AAS1]
Length = 703
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 171/322 (53%), Gaps = 30/322 (9%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
++VA +LA + MD I AGLL VVE ++++++ G A L+ ++
Sbjct: 53 IAVASILASIGMDYHSIVAGLLHDVVEDTDTTVEEIKKEFGPQIASLVDGLTKIDK---Y 109
Query: 174 KLQVLDDETAAALRK--FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKI 231
K + A RK F ++ D+R +++ LA RL MR LDY+PR++QL I+ E + I
Sbjct: 110 KFSSKEHAKAENYRKMLFAMSK-DVRVIVIKLADRLHNMRTLDYMPRHKQLEIANETIDI 168
Query: 232 HAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLK 291
+AP+AH + + ELEDL +Y P Y + +++ T S ++Y ++
Sbjct: 169 YAPIAHRLGIWSIKKELEDLYLKYTHPEEYEKIKDFVQKISTES----EVYLKKYFISKV 224
Query: 292 TDATLADLVED----VSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVN 347
+A + D +D ++Q R K YS +KL + E++ D+LG+RVI++
Sbjct: 225 VEA-INDFFKDKKPNYTIQYRQKHIYSIYQKLKRKNLSLEDLQDILGIRVIVE------- 276
Query: 348 TSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEI 407
+V E CYT I+ S+++ +P DYI+ PK N Y+SLH AV+ G + ++E+
Sbjct: 277 --DVAE--CYTVLGIVHSIFRPIPGSFDDYISLPKPNMYQSLHTAVE----GPKKRVVEV 328
Query: 408 QIRTEEMDMLAVNGTASHAFYK 429
QIRT EM A G A+H YK
Sbjct: 329 QIRTYEMHERAEKGIAAHWAYK 350
>gi|375087257|ref|ZP_09733639.1| RelA/SpoT family protein [Megamonas funiformis YIT 11815]
gi|374562074|gb|EHR33409.1| RelA/SpoT family protein [Megamonas funiformis YIT 11815]
Length = 740
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/322 (33%), Positives = 167/322 (51%), Gaps = 27/322 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L VA++L DL +D I+A LL VVE +I+Q+++ G A L+ ++
Sbjct: 52 ITHPLHVAMILTDLHIDEVTIAAALLHDVVEDTIYTIEQMKELFGEEVAMLIDGVTKLSK 111
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+K + +D+ RK F DIR +++ LA RL MR L Y+ +Q I+ E
Sbjct: 112 ---MKYKSKEDQQLETYRKMFLAMAKDIRVIMIKLADRLHNMRTLKYMREEKQKRIAKET 168
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYL-FVDTWLRSHETGSKPLIDIYKEQLL 287
++++APLA+ + + + +ELEDL RYL P +Y VD + E + D
Sbjct: 169 LEVYAPLANRLGISNIKWELEDLCLRYLEPETYYDLVDKVNQKREERQGFIND------- 221
Query: 288 QCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVN 347
K + ++GR K YS +K+ K + ++ D+L +RV+++ +
Sbjct: 222 AVAKIQQEFDKIHLKGEIKGRAKHFYSIYRKMKKSNKDISDIFDLLAVRVLVQTIPD--- 278
Query: 348 TSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEI 407
CYT II ++WK +P R KDYIA PK NGY+SLH V ++DNG PL EI
Sbjct: 279 --------CYTVLGIIHAMWKPLPGRFKDYIAVPKTNGYQSLHTTV-ITDNG--LPL-EI 326
Query: 408 QIRTEEMDMLAVNGTASHAFYK 429
QIRT M ++ G A+H YK
Sbjct: 327 QIRTFAMHAISEYGIAAHWKYK 348
>gi|260887825|ref|ZP_05899088.1| GTP diphosphokinase [Selenomonas sputigena ATCC 35185]
gi|260862431|gb|EEX76931.1| GTP diphosphokinase [Selenomonas sputigena ATCC 35185]
Length = 749
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/317 (33%), Positives = 168/317 (52%), Gaps = 26/317 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA +L DLQ+D ISA +L VVE ++ ++R+ G A L+ ++ +
Sbjct: 64 LAVAKILTDLQIDDITISAAILHDVVEDTTHTLDEMRELFGDEVAMLIDGVTKLGR---I 120
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ + RK F DIR +++ LA RL MR L Y+ +Q I+ E ++I+
Sbjct: 121 QYKSKEEQQLESYRKMFLAMAKDIRVIMIKLADRLHNMRTLKYMREDKQKRIARETIEIY 180
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA+ + + + +ELEDL RYL P +Y + ++ + ID EQ+++ L+
Sbjct: 181 APLANRLGISNVKWELEDLCLRYLDPKAYYDLVESVKQKRQERQAFIDEAHEQIVEKLEE 240
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
A+ +QGR K YS KK+ +D + E+ D+ LRV++ +
Sbjct: 241 AHITAE------IQGRAKHFYSIYKKMKRDQKDISEIYDLSALRVLVDSVKD-------- 286
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II ++WK +P R KDYIA PK+NGY+SLH V + PL EIQIRT
Sbjct: 287 ---CYGVLGIIHAMWKPLPGRFKDYIAMPKSNGYQSLHTTVIC----RGYPL-EIQIRTF 338
Query: 413 EMDMLAVNGTASHAFYK 429
M ++ G A+H YK
Sbjct: 339 AMHKVSEYGVAAHWKYK 355
>gi|304407548|ref|ZP_07389200.1| (p)ppGpp synthetase I, SpoT/RelA [Paenibacillus curdlanolyticus
YK9]
gi|304343499|gb|EFM09341.1| (p)ppGpp synthetase I, SpoT/RelA [Paenibacillus curdlanolyticus
YK9]
Length = 728
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 162/319 (50%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
++VA +L D+QMD I A LL VVE V++ VR R G A L+ +++ +
Sbjct: 49 IAVADILVDMQMDVMSIIAALLHDVVEDTTVNLDGVRARFGDTCAMLVDGLTKLEK---I 105
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ RK F DIR +++ LA RL MR L + Q I+ E ++I
Sbjct: 106 KFRSKEEQQNENYRKMFVAMAQDIRVILIKLADRLHNMRTLKFQSEEAQRRIAYETLEIF 165
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
P+AH + + + +E+ED++ RYL P Y + ++ T + ID ++ + L
Sbjct: 166 CPIAHRLGISAIKWEMEDIALRYLNPQQYYRIANLMKKKRTEREQYIDEVIGRINEKLDE 225
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
D + GR K YS KK+ + E+ D+L +R+I+ N+
Sbjct: 226 MGIQGD------ISGRPKHIYSIYKKMTMKNKQFNEIYDLLAIRIIV---DNI------- 269
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY T II +LW+ MP R KDYIA PKAN Y+SLH V + NG+ E+QIRT
Sbjct: 270 -KDCYATLGIIHTLWRPMPGRFKDYIAMPKANMYQSLHTTV-IGQNGEP---TEVQIRTW 324
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M + G A+H YK G
Sbjct: 325 DMHRTSEYGVAAHWAYKEG 343
>gi|420245731|ref|ZP_14749305.1| (p)ppGpp synthetase, RelA/SpoT family [Rhizobium sp. CF080]
gi|398045823|gb|EJL38509.1| (p)ppGpp synthetase, RelA/SpoT family [Rhizobium sp. CF080]
Length = 738
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 166/325 (51%), Gaps = 28/325 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ L VA +L D+ +D I+ LL +E + ++ + G L+ ++K
Sbjct: 46 ISHPLEVAAILTDMHLDESTIAVALLHDTIEDTTATRAEIDELFGEDIGRLVEGLTKLKR 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L L + A LRK L D +R L++ LA RL MR L+++ Q+ IS E
Sbjct: 106 ---LDLVSKKAKQAENLRKLLLAISDDVRVLLVKLADRLHNMRTLEHMKAEQKARISEET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M I+APLA + + ELE+LSFRY+ P +Y V L E ++ LI +++L +
Sbjct: 163 MDIYAPLAGRMGMQDMRDELEELSFRYMNPEAYETVTQRLADLEARNEGLIKKIEDELRE 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIK--PSSNLV 346
L +A+ ++D V+GR K YS +K+ E+++DV G R+I+ PS
Sbjct: 223 LL-----IANGLKDAFVKGRQKKPYSVFRKMQSKSLSFEQLSDVYGFRIIVGDIPS---- 273
Query: 347 NTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLME 406
CY I+ + W+ +P R KDYI+ PK N YRS+H + G +R +E
Sbjct: 274 ---------CYRALGIVHTRWRVVPGRFKDYISNPKQNDYRSIHTTI----VGPSRQRIE 320
Query: 407 IQIRTEEMDMLAVNGTASHAFYKGG 431
+QIRT+ M +A G A+HA YK G
Sbjct: 321 LQIRTQLMQEIAEYGIAAHALYKDG 345
>gi|392943901|ref|ZP_10309543.1| (p)ppGpp synthetase, RelA/SpoT family [Frankia sp. QA3]
gi|392287195|gb|EIV93219.1| (p)ppGpp synthetase, RelA/SpoT family [Frankia sp. QA3]
Length = 836
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/326 (33%), Positives = 168/326 (51%), Gaps = 37/326 (11%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++VA +LADL MD +SA LL +E +S + +R+ G A L+ +++ N
Sbjct: 141 ITHPIAVASILADLGMDTPTLSAALLHDTLEETSLSAEAIRETFGDQIA-LIVDAVSKLN 199
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
V +V + A +R+ + D RAL++ LA RL MR L +LP ++Q + E
Sbjct: 200 RV----KVGEAAQAETIRRMVVAMARDPRALVVKLADRLHNMRTLRFLPEHKQERKARET 255
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSY-----LFVDTWLRSHETGSKPLIDIYK 283
++++APLAH + N L +ELEDL+F L+P Y L D P D+Y
Sbjct: 256 LEVYAPLAHRLGMNSLKWELEDLAFAALYPKRYDEIVRLVAD---------RAPSRDVYL 306
Query: 284 EQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSS 343
+++ + A + D V GR K YS +K++ GR +++ D++G+RV++
Sbjct: 307 AEVIG--QVQAGVGDARIRAVVSGRPKHYYSIYQKMVVRGRSFDDIYDLVGIRVLVD--- 361
Query: 344 NLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRP 403
R CY T + + WK +P R KDYIA PK N Y+SLH V + GK
Sbjct: 362 --------SVRDCYATLGTVHANWKPIPGRFKDYIAMPKFNMYQSLHTTV-IGPEGKP-- 410
Query: 404 LMEIQIRTEEMDMLAVNGTASHAFYK 429
+E+QIRT M A G A+H YK
Sbjct: 411 -VELQIRTHAMHNRAEYGIAAHWKYK 435
>gi|229175081|ref|ZP_04302598.1| GTP pyrophosphokinase [Bacillus cereus MM3]
gi|423457346|ref|ZP_17434143.1| GTP pyrophosphokinase [Bacillus cereus BAG5X2-1]
gi|228608377|gb|EEK65682.1| GTP pyrophosphokinase [Bacillus cereus MM3]
gi|401147730|gb|EJQ55223.1| GTP pyrophosphokinase [Bacillus cereus BAG5X2-1]
Length = 727
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/321 (33%), Positives = 161/321 (50%), Gaps = 25/321 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD +SAG L VVE ++++ + A L+ ++ +
Sbjct: 55 IQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP+ +Q I+ E ++I
Sbjct: 112 KYKSHEQQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED S RYL P Y + ++ + +D + + LK
Sbjct: 172 APLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVMTGIREKLKE 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
A + + GR K YS +K+ + E+ D+L +RV++ +
Sbjct: 232 VAIQPE------ISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+QIRT+
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTV-IGPKGD--PL-EVQIRTK 330
Query: 413 EMDMLAVNGTASHAFYKGGLT 433
EM +A G A+H YK G T
Sbjct: 331 EMHEIAEFGIAAHWAYKEGKT 351
>gi|345023332|ref|ZP_08786945.1| GTP pyrophosphokinase [Ornithinibacillus scapharcae TW25]
Length = 732
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 166/319 (52%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL+MD E I+ G L VVE ++++ + + A L+ ++ +
Sbjct: 55 IQVAGILVDLKMDPETIAGGFLHDVVEDTDITLEMIEEEFNKEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP +Q + + E ++I
Sbjct: 112 KYKSKEAQQAENHRKMFVAMAKDIRVILIKLADRLHNMRTLKHLPPEKQRIKANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ ID +++Q +
Sbjct: 172 APLAHRLGISTIKWELEDTALRYLNPQQYYRIVQLMKQKRDQRVSYID----EVIQ--EV 225
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
L +L + + GR K YS +K++K + E+ D+L +RV LVN+
Sbjct: 226 SDQLEELNIEAEISGRPKHLYSIYQKMVKQNKQFNEIYDLLAVRV-------LVNSI--- 275
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY II + WK MP R KDYIA PK N Y+SLH V + G PL E+QIRT+
Sbjct: 276 -KDCYAVLGIIHTCWKPMPGRFKDYIAMPKQNLYQSLHTTV-IGPKGD--PL-EVQIRTK 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 331 EMHEIAEYGIAAHWAYKEG 349
>gi|386085853|ref|YP_006001727.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Streptococcus thermophilus
ND03]
gi|312277566|gb|ADQ62223.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Streptococcus thermophilus
ND03]
Length = 739
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 186/364 (51%), Gaps = 28/364 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL +DA ++ G L VVE ++ + G +++ ++ +
Sbjct: 55 IQVAGILADLHLDAVTVACGFLHDVVEDTEKTLDDLEADFGTDVRNIVDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E M+I+
Sbjct: 112 EYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED +FRYL + + ++ + L+D +++ +KT
Sbjct: 172 APLAHRLGISRIKWELEDTAFRYLNEVEFYKISHMMKEKRREREALVD----EIVDKIKT 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
LV D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 228 YTAEQGLVGD--VYGRPKHIYSIFRKMRDKKKRFDQIYDLIAIRCVMETHSDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PK+NGY+S+H V G P+ EIQIRT+
Sbjct: 279 ----YAMLGYIHELWRPMPGRFKDYIANPKSNGYQSIHTTV----YGPKGPI-EIQIRTK 329
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFEFDWR 472
EM +A G A+H YK G+ ++K M +L + L+D + + KGF +
Sbjct: 330 EMHQVAEYGVAAHWAYKKGIKGKVDSKESALGMNWIKDL--VELQDASNGDAKGFVDSVK 387
Query: 473 DRVF 476
+ +F
Sbjct: 388 EDIF 391
>gi|423395299|ref|ZP_17372500.1| GTP pyrophosphokinase [Bacillus cereus BAG2X1-1]
gi|423406174|ref|ZP_17383323.1| GTP pyrophosphokinase [Bacillus cereus BAG2X1-3]
gi|401654710|gb|EJS72249.1| GTP pyrophosphokinase [Bacillus cereus BAG2X1-1]
gi|401660168|gb|EJS77650.1| GTP pyrophosphokinase [Bacillus cereus BAG2X1-3]
Length = 727
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/321 (33%), Positives = 161/321 (50%), Gaps = 25/321 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD +SAG L VVE ++++ + A L+ ++ +
Sbjct: 55 IQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP+ +Q I+ E ++I
Sbjct: 112 KYKSHEQQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED S RYL P Y + ++ + +D + + LK
Sbjct: 172 APLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVMTGIREKLKE 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
A + + GR K YS +K+ + E+ D+L +RV++ +
Sbjct: 232 VAIQPE------ISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+QIRT+
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTV-IGPKGD--PL-EVQIRTK 330
Query: 413 EMDMLAVNGTASHAFYKGGLT 433
EM +A G A+H YK G T
Sbjct: 331 EMHEIAEFGIAAHWAYKEGKT 351
>gi|282600882|ref|ZP_05980016.2| GTP diphosphokinase [Subdoligranulum variabile DSM 15176]
gi|282571256|gb|EFB76791.1| RelA/SpoT family protein [Subdoligranulum variabile DSM 15176]
Length = 736
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 167/332 (50%), Gaps = 29/332 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ LSVA +L +L MD+E I+A L+ V E V++ +++ + G A L+ ++
Sbjct: 66 ICHPLSVAQILVELGMDSESIAAALMHDVAEDTPVTVAEIKQKFGPEVALLVDGVTKL-- 123
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+K ++D A LRK L D+R +I+ L RL MR D P ++ +LE
Sbjct: 124 -TQIKFSNVEDRQAENLRKMLLAMSQDVRVMIIKLCDRLHNMRTGDAWPEQKRRDKALET 182
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+++AP+AH + + + ELED S YL P Y + L H G + L +
Sbjct: 183 MEVYAPIAHRLGISNIKEELEDRSLHYLDPIGYETIRDLLNKH--GDEFLHKV------- 233
Query: 289 CLKTDATLA-DLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVN 347
C LA + + +++ R KS Y +K+ + EE+ D+ +R+I++ N
Sbjct: 234 CHTIARHLAENGIPKATIRHRVKSIYGIYRKMYMQNKDFEEIYDIYAVRIILE------N 287
Query: 348 TSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEI 407
E CYT +I ++ +P+R KDYI+ PK NGY+SLH V G+ E+
Sbjct: 288 VPE-----CYTALGLIHDMYHPLPNRFKDYISTPKPNGYQSLHTTV----IGREAIPFEV 338
Query: 408 QIRTEEMDMLAVNGTASHAFYKGGLTNPEEAK 439
QIRT +MD +A G A+H YK G+T K
Sbjct: 339 QIRTWDMDRMAEYGIAAHWKYKAGITGSSNDK 370
>gi|387908943|ref|YP_006339249.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Streptococcus thermophilus
MN-ZLW-002]
gi|387573878|gb|AFJ82584.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Streptococcus thermophilus
MN-ZLW-002]
Length = 739
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 186/364 (51%), Gaps = 28/364 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL +DA ++ G L VVE ++ + G +++ ++ +
Sbjct: 55 IQVAGILADLHLDAVTVACGFLHDVVEDTEKTLDDLEADFGTDVRNIVDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E M+I+
Sbjct: 112 EYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED +FRYL + + ++ + L+D +++ +KT
Sbjct: 172 APLAHRLGISRIKWELEDTAFRYLNEVEFYKISHMMKEKRREREALVD----EIVDKIKT 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
LV D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 228 YTAEQGLVGD--VYGRPKHIYSIFRKMRDKKKRFDQIYDLIAIRCVMETHSDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PK+NGY+S+H V G P+ EIQIRT+
Sbjct: 279 ----YAMLGYIHELWRPMPGRFKDYIANPKSNGYQSIHTTV----YGPKGPI-EIQIRTK 329
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFEFDWR 472
EM +A G A+H YK G+ ++K M +L + L+D + + KGF +
Sbjct: 330 EMHQVAEYGVAAHWAYKKGIKGKVDSKESALGMNWIKDL--VELQDASNGDAKGFVDSVK 387
Query: 473 DRVF 476
+ +F
Sbjct: 388 EDIF 391
>gi|323340775|ref|ZP_08081027.1| GTP diphosphokinase [Lactobacillus ruminis ATCC 25644]
gi|417974230|ref|ZP_12615052.1| GTP pyrophosphokinase [Lactobacillus ruminis ATCC 25644]
gi|323091898|gb|EFZ34518.1| GTP diphosphokinase [Lactobacillus ruminis ATCC 25644]
gi|346329455|gb|EGX97752.1| GTP pyrophosphokinase [Lactobacillus ruminis ATCC 25644]
Length = 739
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/327 (35%), Positives = 168/327 (51%), Gaps = 35/327 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL+MD E +SAG L VVE V++ V + G ++ ++ +
Sbjct: 55 IQVAGILADLKMDPETVSAGFLHDVVEDTPVTLGDVGELFGKDVEVIVDGVTKLSK---I 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + ++ A RK L D+R +I+ LA RL MR L +L +Q I+ E ++I+
Sbjct: 112 RYKSHQEQLAENHRKLLLAMSKDLRVIIVKLADRLHNMRTLGHLRPDKQRRIANETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + + +ELED+S RYL P Y + H SK +E+ +Q +
Sbjct: 172 APLADRLGISTIKWELEDISLRYLNPQQYYRI-----VHLMNSK------REERVQYIDE 220
Query: 293 DAT-----LADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVN 347
T +ADL D + GR K YS K+ + ++ D+L +RV++K +
Sbjct: 221 AITEIKEAIADLHLDCEIYGRPKHIYSIYHKMRDLHKQFSQIYDLLAVRVVVKSIKD--- 277
Query: 348 TSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEI 407
CY I + WK MP R KDYIA PKAN Y+SLH V + GK PL E+
Sbjct: 278 --------CYAVLGAIHTKWKPMPGRFKDYIAMPKANMYQSLHTTV-IGPKGK--PL-EV 325
Query: 408 QIRTEEMDMLAVNGTASHAFYKGGLTN 434
QIRTEEM +A G A+H YK G TN
Sbjct: 326 QIRTEEMHRVAEYGIAAHWAYKEGKTN 352
>gi|119952995|ref|YP_945204.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Borrelia
turicatae 91E135]
gi|119861766|gb|AAX17534.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Borrelia
turicatae 91E135]
Length = 667
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 177/356 (49%), Gaps = 43/356 (12%)
Query: 84 RLLFKALKLSIPMLQSLPLSPDSRSP-LTKALSVALLLADLQMDAEVISAGLLRQVVESG 142
+L+FKAL++S + +S+ P + + V+L L Q+D + I AGLL V+E
Sbjct: 38 KLIFKALEISEQL--HYGQYRESKEPYVIHPIMVSLFLIKFQLDFKTIIAGLLHDVLEDT 95
Query: 143 GVSIQQVRDRI---------GIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRKFCLTY 193
V +++ G+ H LH R N ++ F +T+
Sbjct: 96 SVKKEEIIKEFDQEILSLIDGVTKIHDLHNKTRAIKEANTISKMF----------FAMTH 145
Query: 194 YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSF 253
DIR +I+ LA +L M L +LP+ ++ I+ + + + P+A + + L LEDLS
Sbjct: 146 -DIRIIIIKLADKLHNMATLSHLPKNRRERIARDCLATYVPIAERLGISSLKIYLEDLSL 204
Query: 254 RYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRY 313
+YL+P Y + +L + + + +YK +L+ + L + DV++ R K Y
Sbjct: 205 KYLYPKEYKEIKNFLSATKIEREK--KLYKGKLI----IEKELKKIGIDVTITVRSKHFY 258
Query: 314 STMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHR 373
S +K+ ++ D LG+R+I K ++ CY EI+ +WK +P R
Sbjct: 259 SIFRKMKTRNNNISQIFDTLGIRIICKQ-----------QKECYEILEIVHKVWKPIPGR 307
Query: 374 TKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYK 429
KDYIA PK N Y+SLH V + ++ + L+EIQIRTEEMD +A G A+H YK
Sbjct: 308 LKDYIAIPKENKYQSLHTTVRIPEDNQ---LIEIQIRTEEMDKIAKYGVAAHWLYK 360
>gi|445498733|ref|ZP_21465588.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase SpoT
[Janthinobacterium sp. HH01]
gi|444788728|gb|ELX10276.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase SpoT
[Janthinobacterium sp. HH01]
Length = 777
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/406 (29%), Positives = 205/406 (50%), Gaps = 35/406 (8%)
Query: 38 AESSSSSFASS-PAPLP-----STAGEKMVVKLVGAFNELTERM-NVLSSSSSRLLFKAL 90
+S++S+ ASS PAP+P S + V + LTE++ ++++ + + +A
Sbjct: 34 GDSTASTIASSAPAPVPPVISSSPLATPTLTAGVASVTHLTEKLAEYMNAADLKKVKEAY 93
Query: 91 KLSIPMLQSLPLSPDSRSP-LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQV 149
+ S M L S P ++ ++VA + AD ++DA+ I A LL V+E V +++
Sbjct: 94 RFSDEM--HLGQVRKSGEPYISHPIAVAEICADWKLDAQAIMAALLHDVMEDQDVKKEEL 151
Query: 150 RDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLD 208
+R G A+L+ + L + + Q+ + A RK L D+R +++ LA RL
Sbjct: 152 IERFGAPVANLV-DGLSKLEKIEFQSQI--EAQAENFRKMLLAMASDVRVILIKLADRLH 208
Query: 209 MMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWL 268
MR ++ + ++ IS E M+++ P+AH + N + EL+DLSF +L+P Y + +
Sbjct: 209 NMRTMEVMAPAKKARISSETMEVYVPIAHRLGLNNIYRELQDLSFSHLYPLRYRTLAKAV 268
Query: 269 RSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEE 328
++ + ++ +++L+ +K ++A + + V GR K+ Y KK+ +
Sbjct: 269 KAARGNRREVV----KKILESVKNTLSMASI--EAEVYGREKTLYGIYKKMRSKHLSFSQ 322
Query: 329 VNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRS 388
V DV G RV++ N CY + SL+K MP + KDYIA K NGY+S
Sbjct: 323 VLDVYGFRVVVDSFPN-----------CYVALGTLHSLYKPMPGKFKDYIAIRKLNGYQS 371
Query: 389 LHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTN 434
LH + G +E QIRT+EM A +G A+H YK G N
Sbjct: 372 LHTTLI----GPYGTPVEFQIRTQEMHRTAESGVAAHWLYKNGEAN 413
>gi|56421113|ref|YP_148431.1| GTP pyrophosphokinase [Geobacillus kaustophilus HTA426]
gi|375009672|ref|YP_004983305.1| GTP pyrophosphokinase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|56380955|dbj|BAD76863.1| GTP pyrophosphokinase (ppGpp synthetase) [Geobacillus kaustophilus
HTA426]
gi|359288521|gb|AEV20205.1| GTP pyrophosphokinase [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 732
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 165/321 (51%), Gaps = 25/321 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL+MDA I+AG L V+E + + + G A L+ ++ +
Sbjct: 55 IQVAGILVDLKMDATTIAAGFLHDVIEDTEATKEDLEREFGAEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP +Q I+ E ++I
Sbjct: 112 KYKSQEEQQAENHRKMFLAMAQDIRVILIKLADRLHNMRTLKHLPAEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ + Y E+++Q ++
Sbjct: 172 APLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAEREQ----YLEEVIQEVRE 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
L ++ + GR K YS +K++ + E+ D+L +R+I+ +
Sbjct: 228 --RLNEVHIPCEISGRPKHIYSIYRKMVMQNKQFNEIYDLLAVRIIVNSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PK N Y+SLH V + G+ PL E+QIRT
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGE--PL-EVQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGGLT 433
EM +A G A+H YK G T
Sbjct: 331 EMHQIAEFGIAAHWAYKEGKT 351
>gi|335996741|ref|ZP_08562658.1| GTP pyrophosphokinase [Lactobacillus ruminis SPM0211]
gi|335351811|gb|EGM53302.1| GTP pyrophosphokinase [Lactobacillus ruminis SPM0211]
Length = 739
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/327 (35%), Positives = 168/327 (51%), Gaps = 35/327 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL+MD E +SAG L VVE V++ V + G ++ ++ +
Sbjct: 55 IQVAGILADLKMDPETVSAGFLHDVVEDTPVTLGDVGELFGKDVEVIVDGVTKLSK---I 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + ++ A RK L D+R +I+ LA RL MR L +L +Q I+ E ++I+
Sbjct: 112 RYKSHQEQLAENHRKLLLAMSKDLRVIIVKLADRLHNMRTLGHLRPDKQRRIANETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + + +ELED+S RYL P Y + H SK +E+ +Q +
Sbjct: 172 APLADRLGISTIKWELEDISLRYLNPQQYYRI-----VHLMNSK------REERVQYIDE 220
Query: 293 DAT-----LADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVN 347
T +ADL D + GR K YS K+ + ++ D+L +RV++K +
Sbjct: 221 AITEIKEAIADLHLDCEIYGRPKHIYSIYHKMRDLHKQFSQIYDLLAVRVVVKSIKD--- 277
Query: 348 TSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEI 407
CY I + WK MP R KDYIA PKAN Y+SLH V + GK PL E+
Sbjct: 278 --------CYAVLGAIHTKWKPMPGRFKDYIAMPKANMYQSLHTTV-IGPKGK--PL-EV 325
Query: 408 QIRTEEMDMLAVNGTASHAFYKGGLTN 434
QIRTEEM +A G A+H YK G TN
Sbjct: 326 QIRTEEMHRVAEYGIAAHWAYKEGKTN 352
>gi|423612609|ref|ZP_17588470.1| GTP pyrophosphokinase [Bacillus cereus VD107]
gi|401245334|gb|EJR51690.1| GTP pyrophosphokinase [Bacillus cereus VD107]
Length = 727
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/321 (33%), Positives = 161/321 (50%), Gaps = 25/321 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD +SAG L VVE ++++ + A L+ ++ +
Sbjct: 55 IQVAGILVDLHMDPSTVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP+ +Q I+ E ++I
Sbjct: 112 KYKSHEQQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED S RYL P Y + ++ + +D + + LK
Sbjct: 172 APLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVMTGIREKLKE 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
A + + GR K YS +K+ + E+ D+L +RV++ +
Sbjct: 232 VAIQPE------ISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+QIRT+
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTV-IGPKGD--PL-EVQIRTK 330
Query: 413 EMDMLAVNGTASHAFYKGGLT 433
EM +A G A+H YK G T
Sbjct: 331 EMHEIAEFGIAAHWAYKEGKT 351
>gi|386332969|ref|YP_006029138.1| bifunctional enzyme : (p)ppgpp synthetase II and
guanosine-3',5'-bisdiphosphate 3'-pyrophosphohydrolase
(ppgppase) protein [Ralstonia solanacearum Po82]
gi|334195417|gb|AEG68602.1| bifunctional enzyme : (p)ppgpp synthetase II and
guanosine-3',5'-bisdiphosphate 3'-pyrophosphohydrolase
(ppgppase) protein [Ralstonia solanacearum Po82]
Length = 866
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 192/395 (48%), Gaps = 32/395 (8%)
Query: 48 SPAPLPSTAGEKMVVKLVGAFNELTERMNVLSSSSSRLLFKALKLSIPMLQSLPLSPDSR 107
P P+ + VV + G LTE+++ L + +L+ +A S L S
Sbjct: 134 GPTSQPAAPPRQQVVSIAG----LTEKLSYLKPADMKLVKEAFHFSDEA--HLGQYRQSG 187
Query: 108 SP-LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLR 166
P +T ++VA + A ++D + I A LL V+E GV+ ++ ++ G A L+ +
Sbjct: 188 EPYITHPVAVAEICAGWKLDVQSIMAALLHDVIEDQGVTKSELAEKFGAKVAELVDGLTK 247
Query: 167 VKNNVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMIS 225
+ L+ Q + A + RK L D+R +++ LA R MR LD++P ++ I+
Sbjct: 248 LDK---LEFQSREQAQAESFRKMLLAMARDVRVILVKLADRTHNMRTLDHVPPEKRRRIA 304
Query: 226 LEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQ 285
E M+I+AP+AH + N EL++LSFR PF Y ++ +++ + ++ E
Sbjct: 305 GETMEIYAPIAHRLGLNTTYRELQELSFRIGSPFRYATLEKAVKAARGNRREVVSRILEA 364
Query: 286 LLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNL 345
+ L A+L GR K+ YS +K+ +V DV G RV+++
Sbjct: 365 AQRALADAGIPAELT------GREKTLYSIYRKMHDKQLSFSQVLDVYGFRVVVE----- 413
Query: 346 VNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLM 405
+ CY + SL+K MP + KDYIA PK NGY+SLH + V G +
Sbjct: 414 ------TQMQCYMAVGALHSLYKPMPGKFKDYIAIPKINGYQSLHTTL-VGPFGTP---V 463
Query: 406 EIQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKR 440
E QIRT EM+ +A G A+H YK P+ A++
Sbjct: 464 EFQIRTREMNQIAEAGVAAHWMYKQHHDEPDRAQQ 498
>gi|159037429|ref|YP_001536682.1| (p)ppGpp synthetase I SpoT/RelA [Salinispora arenicola CNS-205]
gi|157916264|gb|ABV97691.1| (p)ppGpp synthetase I, SpoT/RelA [Salinispora arenicola CNS-205]
Length = 827
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/321 (34%), Positives = 168/321 (52%), Gaps = 27/321 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LA+L MD + A LL +E ++ Q+R G G LL + + +
Sbjct: 146 ITHPLAVATILANLGMDTTTLVAALLHDTIEDTEYTLDQMRTDFG-GEVALLVDGVTKLD 204
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
V L D A +RK + D R L++ LA RL MR L +LPR +Q + E
Sbjct: 205 KVKLG----DAAKAETIRKMVVAMAKDPRVLVIKLADRLHNMRTLIFLPRPKQEQKAKET 260
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I APLAH + N + +ELEDL+F LFP Y ++ + H+ + L+ Q+ +
Sbjct: 261 LEILAPLAHRLGMNTIKWELEDLAFGTLFPKRYEEINRLIGEHQPQREALL----RQVTK 316
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ TD A + +V+ GR K YS +K++ GR ++ D++G+R+ LV+T
Sbjct: 317 KVGTDLKAAKIRAEVT--GRPKHLYSIYQKMIVRGRDFNDIYDLVGVRI-------LVDT 367
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY +I + W+ +P R KDYIA PK N Y+SLH V + GK +E+Q
Sbjct: 368 V----RDCYAALGVIHANWQPVPGRFKDYIAMPKFNMYQSLHTTV-IGPTGKP---VEMQ 419
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT M A G A+H YK
Sbjct: 420 IRTYAMHRTAEFGIAAHWKYK 440
>gi|300703578|ref|YP_003745180.1| bifunctional (p)ppgpp synthetase II/guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Ralstonia
solanacearum CFBP2957]
gi|421891396|ref|ZP_16322200.1| putative bifunctional: (p)ppGpp synthetase II; guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase; precursor (spoT)
[Ralstonia solanacearum K60-1]
gi|299071241|emb|CBJ42559.1| putative bifunctional: (p)ppGpp synthetase II; guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase; precursor (spoT)
[Ralstonia solanacearum CFBP2957]
gi|378963271|emb|CCF98948.1| putative bifunctional: (p)ppGpp synthetase II; guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase; precursor (spoT)
[Ralstonia solanacearum K60-1]
Length = 761
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 193/395 (48%), Gaps = 32/395 (8%)
Query: 48 SPAPLPSTAGEKMVVKLVGAFNELTERMNVLSSSSSRLLFKALKLSIPMLQSLPLSPDSR 107
P P+ + VV + G LTE+++ L + +L+ +A S L S
Sbjct: 29 GPTSQPAAPPRQQVVSIAG----LTEKLSYLKPADMKLVKEAFHFSDEA--HLGQYRQSG 82
Query: 108 SP-LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLR 166
P +T ++VA + A ++D + I A LL V+E GV+ ++ ++ G A L+ +
Sbjct: 83 EPYITHPVAVAEICAGWKLDVQSIMAALLHDVIEDQGVTKSELAEKFGAKVAELVDGLTK 142
Query: 167 VKNNVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMIS 225
+ L+ Q + A + RK L D+R +++ LA R MR LD++P ++ I+
Sbjct: 143 LDK---LEFQSREQAQAESFRKMLLAMARDVRVILVKLADRTHNMRTLDHVPPEKRRRIA 199
Query: 226 LEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQ 285
E M+I+AP+AH + N EL++LSFR PF Y ++ +++ + ++ +
Sbjct: 200 GETMEIYAPIAHRLGLNTTYRELQELSFRIGSPFRYATLEKAVKAARGNRREVVS----R 255
Query: 286 LLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNL 345
+L+ + LAD + GR K+ YS +K+ +V DV G RV+++
Sbjct: 256 ILEAAQR--ALADAGIPAELTGREKTLYSIYRKMHDKQLSFSQVLDVYGFRVVVETQMQ- 312
Query: 346 VNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLM 405
CY + SL+K MP + KDYIA PK NGY+SLH + G +
Sbjct: 313 ----------CYMAVGALHSLYKPMPGKFKDYIAIPKINGYQSLHTTL----VGPFGTPV 358
Query: 406 EIQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKR 440
E QIRT EM+ +A G A+H YK P+ A++
Sbjct: 359 EFQIRTREMNQIAEAGVAAHWMYKQHHDEPDRAQQ 393
>gi|30022482|ref|NP_834113.1| GTP pyrophosphokinase [Bacillus cereus ATCC 14579]
gi|218232359|ref|YP_002369216.1| GTP diphosphokinase [Bacillus cereus B4264]
gi|218899576|ref|YP_002447987.1| GTP diphosphokinase [Bacillus cereus G9842]
gi|228902935|ref|ZP_04067076.1| GTP pyrophosphokinase [Bacillus thuringiensis IBL 4222]
gi|228910243|ref|ZP_04074061.1| GTP pyrophosphokinase [Bacillus thuringiensis IBL 200]
gi|228941575|ref|ZP_04104123.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228960680|ref|ZP_04122324.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228967483|ref|ZP_04128511.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228974504|ref|ZP_04135071.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228981098|ref|ZP_04141399.1| GTP pyrophosphokinase [Bacillus thuringiensis Bt407]
gi|229048116|ref|ZP_04193687.1| GTP pyrophosphokinase [Bacillus cereus AH676]
gi|229111879|ref|ZP_04241425.1| GTP pyrophosphokinase [Bacillus cereus Rock1-15]
gi|229129687|ref|ZP_04258655.1| GTP pyrophosphokinase [Bacillus cereus BDRD-Cer4]
gi|229146978|ref|ZP_04275340.1| GTP pyrophosphokinase [Bacillus cereus BDRD-ST24]
gi|229152610|ref|ZP_04280799.1| GTP pyrophosphokinase [Bacillus cereus m1550]
gi|296504899|ref|YP_003666599.1| GTP pyrophosphokinase [Bacillus thuringiensis BMB171]
gi|384188479|ref|YP_005574375.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|402564115|ref|YP_006606839.1| GTP pyrophosphokinase [Bacillus thuringiensis HD-771]
gi|410676793|ref|YP_006929164.1| GTP pyrophosphokinase RelA [Bacillus thuringiensis Bt407]
gi|423358556|ref|ZP_17336059.1| GTP pyrophosphokinase [Bacillus cereus VD022]
gi|423385906|ref|ZP_17363162.1| GTP pyrophosphokinase [Bacillus cereus BAG1X1-2]
gi|423527737|ref|ZP_17504182.1| GTP pyrophosphokinase [Bacillus cereus HuB1-1]
gi|423561125|ref|ZP_17537401.1| GTP pyrophosphokinase [Bacillus cereus MSX-A1]
gi|423585115|ref|ZP_17561202.1| GTP pyrophosphokinase [Bacillus cereus VD045]
gi|423631131|ref|ZP_17606878.1| GTP pyrophosphokinase [Bacillus cereus VD154]
gi|423640514|ref|ZP_17616132.1| GTP pyrophosphokinase [Bacillus cereus VD166]
gi|423650270|ref|ZP_17625840.1| GTP pyrophosphokinase [Bacillus cereus VD169]
gi|423657360|ref|ZP_17632659.1| GTP pyrophosphokinase [Bacillus cereus VD200]
gi|434377574|ref|YP_006612218.1| GTP pyrophosphokinase [Bacillus thuringiensis HD-789]
gi|452200870|ref|YP_007480951.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
gi|29898040|gb|AAP11314.1| GTP pyrophosphokinase [Bacillus cereus ATCC 14579]
gi|218160316|gb|ACK60308.1| GTP diphosphokinase [Bacillus cereus B4264]
gi|218543265|gb|ACK95659.1| GTP diphosphokinase [Bacillus cereus G9842]
gi|228630871|gb|EEK87511.1| GTP pyrophosphokinase [Bacillus cereus m1550]
gi|228636475|gb|EEK92943.1| GTP pyrophosphokinase [Bacillus cereus BDRD-ST24]
gi|228653804|gb|EEL09674.1| GTP pyrophosphokinase [Bacillus cereus BDRD-Cer4]
gi|228671635|gb|EEL26933.1| GTP pyrophosphokinase [Bacillus cereus Rock1-15]
gi|228723219|gb|EEL74593.1| GTP pyrophosphokinase [Bacillus cereus AH676]
gi|228778639|gb|EEM26905.1| GTP pyrophosphokinase [Bacillus thuringiensis Bt407]
gi|228785221|gb|EEM33233.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228792198|gb|EEM39772.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228798986|gb|EEM45959.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228818082|gb|EEM64159.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228849407|gb|EEM94243.1| GTP pyrophosphokinase [Bacillus thuringiensis IBL 200]
gi|228856719|gb|EEN01238.1| GTP pyrophosphokinase [Bacillus thuringiensis IBL 4222]
gi|296325951|gb|ADH08879.1| GTP pyrophosphokinase [Bacillus thuringiensis BMB171]
gi|326942188|gb|AEA18084.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|401084428|gb|EJP92674.1| GTP pyrophosphokinase [Bacillus cereus VD022]
gi|401202179|gb|EJR09041.1| GTP pyrophosphokinase [Bacillus cereus MSX-A1]
gi|401233758|gb|EJR40244.1| GTP pyrophosphokinase [Bacillus cereus VD045]
gi|401264498|gb|EJR70610.1| GTP pyrophosphokinase [Bacillus cereus VD154]
gi|401279575|gb|EJR85497.1| GTP pyrophosphokinase [Bacillus cereus VD166]
gi|401282688|gb|EJR88587.1| GTP pyrophosphokinase [Bacillus cereus VD169]
gi|401290103|gb|EJR95807.1| GTP pyrophosphokinase [Bacillus cereus VD200]
gi|401635962|gb|EJS53717.1| GTP pyrophosphokinase [Bacillus cereus BAG1X1-2]
gi|401792767|gb|AFQ18806.1| GTP pyrophosphokinase [Bacillus thuringiensis HD-771]
gi|401876131|gb|AFQ28298.1| GTP pyrophosphokinase [Bacillus thuringiensis HD-789]
gi|402451400|gb|EJV83219.1| GTP pyrophosphokinase [Bacillus cereus HuB1-1]
gi|409175922|gb|AFV20227.1| GTP pyrophosphokinase RelA [Bacillus thuringiensis Bt407]
gi|452106263|gb|AGG03203.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
Length = 727
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/321 (33%), Positives = 161/321 (50%), Gaps = 25/321 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD +SAG L VVE ++++ + A L+ ++ +
Sbjct: 55 IQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP+ +Q I+ E ++I
Sbjct: 112 KYKSHEQQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED S RYL P Y + ++ + +D + + LK
Sbjct: 172 APLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVMTGIREKLKE 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
A + + GR K YS +K+ + E+ D+L +RV++ +
Sbjct: 232 VAIQPE------ISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+QIRT+
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTV-IGPKGD--PL-EVQIRTK 330
Query: 413 EMDMLAVNGTASHAFYKGGLT 433
EM +A G A+H YK G T
Sbjct: 331 EMHEIAEFGIAAHWAYKEGKT 351
>gi|194017102|ref|ZP_03055714.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Bacillus pumilus
ATCC 7061]
gi|194010970|gb|EDW20540.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Bacillus pumilus
ATCC 7061]
Length = 736
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/324 (32%), Positives = 167/324 (51%), Gaps = 25/324 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL+MD I+ G L VVE V++Q +++ A L+ ++ +
Sbjct: 55 IQVAGILVDLEMDPSTIAGGFLHDVVEDTDVTLQDLKEHFNEEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP+ +Q IS E ++I
Sbjct: 112 KYKSQEEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ + +D +++ +K
Sbjct: 172 APLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKRKRAEREEYLD----EVVNEVKD 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ + S GR K YS +K++ + E+ D+L +R+++ +
Sbjct: 228 RVSEVNIKAEFS--GRPKHIYSIYRKMVLQNKQFNEIYDLLAVRILVDSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PK N Y+SLH V + G PL E+QIRT
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGD--PL-EVQIRTV 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPE 436
EM +A G A+H YK G + E
Sbjct: 331 EMHEIAEYGIAAHWAYKEGKESAE 354
>gi|241663545|ref|YP_002981905.1| (p)ppGpp synthetase I SpoT/RelA [Ralstonia pickettii 12D]
gi|240865572|gb|ACS63233.1| (p)ppGpp synthetase I, SpoT/RelA [Ralstonia pickettii 12D]
Length = 760
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 192/395 (48%), Gaps = 32/395 (8%)
Query: 48 SPAPLPSTAGEKMVVKLVGAFNELTERMNVLSSSSSRLLFKALKLSIPMLQSLPLSPDSR 107
P P+ + VV + G LTE+++ L + +L+ +A S L S
Sbjct: 29 GPTSQPAAPPRQQVVSISG----LTEKLSYLKPADLKLVKEAFHFSDEA--HLGQYRQSG 82
Query: 108 SP-LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLR 166
P +T ++VA + A ++D + I A LL V+E GV+ ++ ++ G A L+ +
Sbjct: 83 EPYITHPVAVAEICAGWKLDVQSIMAALLHDVIEDQGVTKSELAEKFGPKVAELVDGLTK 142
Query: 167 VKNNVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMIS 225
+ L+ Q + A + RK L D+R +++ LA R MR LD++P ++ I+
Sbjct: 143 LDK---LEFQSREQAQAESFRKMLLAMARDVRVILVKLADRTHNMRTLDHVPPEKRRRIA 199
Query: 226 LEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQ 285
E M+I+AP+AH + N EL++LSFR PF Y ++ +++ + ++ E
Sbjct: 200 GETMEIYAPIAHRLGLNTTYRELQELSFRIGSPFRYATLEKAVKAARGNRREVVSRILET 259
Query: 286 LLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNL 345
+ L TDA + + GR K+ YS +K+ +V DV G RV++
Sbjct: 260 AQRAL-TDAGIP-----AEMTGREKTLYSIYRKMHDKQLSFSQVLDVYGFRVVVDTQMQ- 312
Query: 346 VNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLM 405
CY T + SL+K MP + KDYIA PK NGY+SLH + G +
Sbjct: 313 ----------CYMTMGALHSLYKPMPGKFKDYIAIPKINGYQSLHTTL----VGPFGTPV 358
Query: 406 EIQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKR 440
E QIRT EM+ +A G A+H YK P+ A++
Sbjct: 359 EFQIRTREMNQIAEAGVAAHWMYKQHHDEPDRAQQ 393
>gi|207743761|ref|YP_002260153.1| bifunctional enzyme : (p)ppgpp synthetase II and
guanosine-3',5'-bisdiphosphate 3'-pyrophosphohydrolase
(ppgppase) protein [Ralstonia solanacearum IPO1609]
gi|206595160|emb|CAQ62087.1| bifunctional enzyme : (p)ppgpp synthetase II and
guanosine-3',5'-bisdiphosphate 3'-pyrophosphohydrolase
(ppgppase) protein [Ralstonia solanacearum IPO1609]
Length = 793
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 190/395 (48%), Gaps = 32/395 (8%)
Query: 48 SPAPLPSTAGEKMVVKLVGAFNELTERMNVLSSSSSRLLFKALKLSIPMLQSLPLSPDSR 107
P P+ + VV + G LTE+++ L + +L+ +A S L S
Sbjct: 61 GPTSQPAAPPRQQVVSIAG----LTEKLSYLKPADMKLVKEAFHFSDEA--HLGQYRQSG 114
Query: 108 SP-LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLR 166
P +T ++VA + A ++D + I A LL V+E GV+ ++ ++ G A L+ +
Sbjct: 115 EPYITHPVAVAEICAGWKLDVQSIMAALLHDVIEDQGVTKSELAEKFGAKVAELVDGLTK 174
Query: 167 VKNNVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMIS 225
+ L+ Q + A + RK L D+R +++ LA R MR LD++P ++ I+
Sbjct: 175 LDK---LEFQSREQAQAESFRKMLLAMARDVRVILVKLADRTHNMRTLDHVPPEKRRRIA 231
Query: 226 LEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQ 285
E M+I+AP+AH + N EL++LSFR PF Y ++ +++ + ++ E
Sbjct: 232 GETMEIYAPIAHRLGLNTTYRELQELSFRIGSPFRYATLEKAVKAARGNRREVVSRILEA 291
Query: 286 LLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNL 345
+ L A+L GR K+ YS +K+ +V DV G RV+++
Sbjct: 292 AQRALADAGIPAELT------GREKTLYSIYRKMHDKQLSFSQVLDVYGFRVVVETQMQ- 344
Query: 346 VNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLM 405
CY + SL+K MP + KDYIA PK NGY+SLH + G +
Sbjct: 345 ----------CYMAVGALHSLYKPMPGKFKDYIAIPKINGYQSLHTTL----VGPFGTPV 390
Query: 406 EIQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKR 440
E QIRT EM+ +A G A+H YK P+ A++
Sbjct: 391 EFQIRTREMNQIAEAGVAAHWMYKQHHDEPDRAQQ 425
>gi|83746448|ref|ZP_00943499.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Ralstonia solanacearum UW551]
gi|83726779|gb|EAP73906.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Ralstonia solanacearum UW551]
Length = 731
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 195/395 (49%), Gaps = 32/395 (8%)
Query: 48 SPAPLPSTAGEKMVVKLVGAFNELTERMNVLSSSSSRLLFKALKLSIPMLQSLPLSPDSR 107
P P+ + VV + G LTE+++ L + +L+ +A S L S
Sbjct: 136 GPTSQPAAPPRQQVVSIAG----LTEKLSYLKPADMKLVKEAFHFSDEA--HLGQYRQSG 189
Query: 108 SP-LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLR 166
P +T ++VA + A ++D + I A LL V+E GV+ ++ ++ G A L+ +
Sbjct: 190 EPYITHPVAVAEICAGWKLDVQSIMAALLHDVIEDQGVTKSELAEKFGAKVAELVDGLTK 249
Query: 167 VKNNVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMIS 225
+ L+ Q + A + RK L D+R +++ LA R MR LD++P ++ I+
Sbjct: 250 LDK---LEFQSREQAQAESFRKMLLAMARDVRVILVKLAERTHNMRTLDHVPPEKRRRIA 306
Query: 226 LEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQ 285
+ M+I+AP+AH + N EL++LSFR PF Y ++ +++ + ++ +
Sbjct: 307 CQTMEIYAPIAHRLGLNTTYRELQELSFRIGSPFRYATLEKAVKAARGNRREVVS----R 362
Query: 286 LLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNL 345
+L+ + LAD + GR K+ YS +K+ +V DV G RV+++
Sbjct: 363 ILEAAQR--ALADAGIPAELTGREKTLYSIYRKMHDKQLSFSQVLDVYGFRVVVE----- 415
Query: 346 VNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLM 405
+ CY + SL+K MP + KDYIA PK NGY+SLH + V G +
Sbjct: 416 ------TQMQCYMAVGALHSLYKPMPGKFKDYIAIPKINGYQSLHTTL-VGPFGTP---V 465
Query: 406 EIQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKR 440
E QIRT EM+ +A G A+H YK P+ A++
Sbjct: 466 EFQIRTREMNQIAEAGVAAHWMYKQHHDEPDRAQQ 500
>gi|330838608|ref|YP_004413188.1| (p)ppGpp synthetase I, SpoT/RelA [Selenomonas sputigena ATCC 35185]
gi|329746372|gb|AEB99728.1| (p)ppGpp synthetase I, SpoT/RelA [Selenomonas sputigena ATCC 35185]
Length = 740
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/317 (33%), Positives = 168/317 (52%), Gaps = 26/317 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA +L DLQ+D ISA +L VVE ++ ++R+ G A L+ ++ +
Sbjct: 55 LAVAKILTDLQIDDITISAAILHDVVEDTTHTLDEMRELFGDEVAMLIDGVTKLGR---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ + RK F DIR +++ LA RL MR L Y+ +Q I+ E ++I+
Sbjct: 112 QYKSKEEQQLESYRKMFLAMAKDIRVIMIKLADRLHNMRTLKYMREDKQKRIARETIEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA+ + + + +ELEDL RYL P +Y + ++ + ID EQ+++ L+
Sbjct: 172 APLANRLGISNVKWELEDLCLRYLDPKAYYDLVESVKQKRQERQAFIDEAHEQIVEKLEE 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
A+ +QGR K YS KK+ +D + E+ D+ LRV++ +
Sbjct: 232 AHITAE------IQGRAKHFYSIYKKMKRDQKDISEIYDLSALRVLVDSVKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II ++WK +P R KDYIA PK+NGY+SLH V + PL EIQIRT
Sbjct: 278 ---CYGVLGIIHAMWKPLPGRFKDYIAMPKSNGYQSLHTTVIC----RGYPL-EIQIRTF 329
Query: 413 EMDMLAVNGTASHAFYK 429
M ++ G A+H YK
Sbjct: 330 AMHKVSEYGVAAHWKYK 346
>gi|320105665|ref|YP_004181255.1| (p)ppGpp synthetase I SpoT/RelA [Terriglobus saanensis SP1PR4]
gi|319924186|gb|ADV81261.1| (p)ppGpp synthetase I, SpoT/RelA [Terriglobus saanensis SP1PR4]
Length = 822
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/323 (33%), Positives = 165/323 (51%), Gaps = 29/323 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L V +LA+++MD+ I+AGLL VE VS ++ R G AH++ ++ +
Sbjct: 136 LEVGQVLAEMKMDSTAIAAGLLHDAVEDTDVSTPEIARRFGEQVAHIVEGVTKLDR---I 192
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K +D A +RK L DIR +++ LA RL MR L +L +Q+ I+ E + I+
Sbjct: 193 KFANKEDHQAENIRKMLLAMVTDIRVVLIKLADRLHNMRTLQHLKPEKQMKIARETLDIY 252
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCL-- 290
APLAH + L E EDL+FRY+ P +Y V S E + + E+ L +
Sbjct: 253 APLAHRLGMGKLRGEFEDLAFRYVDPVAYEQV-----SEEVAK---LRVEGEKFLSGIVA 304
Query: 291 KTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSE 350
+A L + V+ R K YS +KL ++V D+L +RVI + +
Sbjct: 305 TIEAKLTEHGIPARVEWRIKRLYSIQQKLAAQAIPVDQVYDLLAIRVITQTMQD------ 358
Query: 351 VGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIR 410
CY T ++ S+W+ +P R KD+IA P+ N Y+SLH + V++ G E+QIR
Sbjct: 359 -----CYATLGLLHSIWRPVPGRIKDFIAMPRPNLYQSLHTTL-VAEGGHQ---FEVQIR 409
Query: 411 TEEMDMLAVNGTASHAFYKGGLT 433
T+EM +A G A+H YK T
Sbjct: 410 TDEMHRIAEEGIAAHWKYKADET 432
>gi|261418406|ref|YP_003252088.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus sp. Y412MC61]
gi|297529258|ref|YP_003670533.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus sp. C56-T3]
gi|319767635|ref|YP_004133136.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus sp. Y412MC52]
gi|448238857|ref|YP_007402915.1| GTP pyrophosphokinase [Geobacillus sp. GHH01]
gi|261374863|gb|ACX77606.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. Y412MC61]
gi|297252510|gb|ADI25956.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. C56-T3]
gi|317112501|gb|ADU94993.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. Y412MC52]
gi|445207699|gb|AGE23164.1| GTP pyrophosphokinase [Geobacillus sp. GHH01]
Length = 732
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 165/321 (51%), Gaps = 25/321 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL+MDA I+AG L V+E + + + G A L+ ++ +
Sbjct: 55 IQVAGILVDLKMDATTIAAGFLHDVIEDTEATKEDLEREFGAEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP +Q I+ E ++I
Sbjct: 112 KYKSQEEQQAENHRKMFLAMAQDIRVILIKLADRLHNMRTLKHLPAEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ + Y E+++Q ++
Sbjct: 172 APLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAEREQ----YLEEVIQEVRE 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
L ++ + GR K YS +K++ + E+ D+L +R+I+ +
Sbjct: 228 --RLNEVHIPCEISGRPKHIYSIYRKMVMQNKQFNEIYDLLAVRIIVNSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PK N Y+SLH V + G+ PL E+QIRT
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGE--PL-EVQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGGLT 433
EM +A G A+H YK G T
Sbjct: 331 EMHQIAEFGIAAHWAYKEGKT 351
>gi|423478548|ref|ZP_17455263.1| GTP pyrophosphokinase [Bacillus cereus BAG6X1-1]
gi|402427544|gb|EJV59650.1| GTP pyrophosphokinase [Bacillus cereus BAG6X1-1]
Length = 726
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/325 (33%), Positives = 163/325 (50%), Gaps = 33/325 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD +SAG L VVE ++++ + A L+ ++ +
Sbjct: 55 IQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP+ +Q I+ E ++I
Sbjct: 112 KYKSHEQQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED S RYL P Y + ++ + +D + + LK
Sbjct: 172 APLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVMTGIREKLK- 230
Query: 293 DATLADLVEDVSVQ----GRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+VS+Q GR K YS +K+ + E+ D+L +RV++ +
Sbjct: 231 ---------EVSIQPEISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKD---- 277
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+Q
Sbjct: 278 -------CYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTV-IGPKGD--PL-EVQ 326
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLT 433
IRT+EM +A G A+H YK G T
Sbjct: 327 IRTKEMHEIAEFGIAAHWAYKEGKT 351
>gi|423400750|ref|ZP_17377923.1| GTP pyrophosphokinase [Bacillus cereus BAG2X1-2]
gi|401653740|gb|EJS71283.1| GTP pyrophosphokinase [Bacillus cereus BAG2X1-2]
Length = 727
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/325 (33%), Positives = 163/325 (50%), Gaps = 33/325 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD +SAG L VVE ++++ + A L+ ++ +
Sbjct: 55 IQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP+ +Q I+ E ++I
Sbjct: 112 KYKSHEQQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED S RYL P Y + ++ + +D + + LK
Sbjct: 172 APLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVMTGIREKLK- 230
Query: 293 DATLADLVEDVSVQ----GRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+VS+Q GR K YS +K+ + E+ D+L +RV++ +
Sbjct: 231 ---------EVSIQPEISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKD---- 277
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+Q
Sbjct: 278 -------CYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTV-IGPKGD--PL-EVQ 326
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLT 433
IRT+EM +A G A+H YK G T
Sbjct: 327 IRTKEMHEIAEFGIAAHWAYKEGKT 351
>gi|228954691|ref|ZP_04116714.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|229071915|ref|ZP_04205126.1| GTP pyrophosphokinase [Bacillus cereus F65185]
gi|229081671|ref|ZP_04214166.1| GTP pyrophosphokinase [Bacillus cereus Rock4-2]
gi|229180683|ref|ZP_04308023.1| GTP pyrophosphokinase [Bacillus cereus 172560W]
gi|365158800|ref|ZP_09354991.1| GTP pyrophosphokinase [Bacillus sp. 7_6_55CFAA_CT2]
gi|423411798|ref|ZP_17388918.1| GTP pyrophosphokinase [Bacillus cereus BAG3O-2]
gi|423426539|ref|ZP_17403570.1| GTP pyrophosphokinase [Bacillus cereus BAG3X2-2]
gi|423432416|ref|ZP_17409420.1| GTP pyrophosphokinase [Bacillus cereus BAG4O-1]
gi|423437851|ref|ZP_17414832.1| GTP pyrophosphokinase [Bacillus cereus BAG4X12-1]
gi|423502906|ref|ZP_17479498.1| GTP pyrophosphokinase [Bacillus cereus HD73]
gi|449091374|ref|YP_007423815.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|228602828|gb|EEK60309.1| GTP pyrophosphokinase [Bacillus cereus 172560W]
gi|228701675|gb|EEL54166.1| GTP pyrophosphokinase [Bacillus cereus Rock4-2]
gi|228711211|gb|EEL63175.1| GTP pyrophosphokinase [Bacillus cereus F65185]
gi|228805018|gb|EEM51614.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|363626294|gb|EHL77285.1| GTP pyrophosphokinase [Bacillus sp. 7_6_55CFAA_CT2]
gi|401103866|gb|EJQ11843.1| GTP pyrophosphokinase [Bacillus cereus BAG3O-2]
gi|401111286|gb|EJQ19185.1| GTP pyrophosphokinase [Bacillus cereus BAG3X2-2]
gi|401117172|gb|EJQ25010.1| GTP pyrophosphokinase [Bacillus cereus BAG4O-1]
gi|401121006|gb|EJQ28802.1| GTP pyrophosphokinase [Bacillus cereus BAG4X12-1]
gi|402459127|gb|EJV90864.1| GTP pyrophosphokinase [Bacillus cereus HD73]
gi|449025131|gb|AGE80294.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar kurstaki str.
HD73]
Length = 727
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/321 (33%), Positives = 161/321 (50%), Gaps = 25/321 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD +SAG L VVE ++++ + A L+ ++ +
Sbjct: 55 IQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP+ +Q I+ E ++I
Sbjct: 112 KYKSHEQQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED S RYL P Y + ++ + +D + + LK
Sbjct: 172 APLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVMTGIREKLKE 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
A + + GR K YS +K+ + E+ D+L +RV++ +
Sbjct: 232 VAIQPE------ISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+QIRT+
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTV-IGPKGD--PL-EVQIRTK 330
Query: 413 EMDMLAVNGTASHAFYKGGLT 433
EM +A G A+H YK G T
Sbjct: 331 EMHEIAEFGIAAHWAYKEGKT 351
>gi|229025869|ref|ZP_04182265.1| GTP pyrophosphokinase [Bacillus cereus AH1272]
gi|423389281|ref|ZP_17366507.1| GTP pyrophosphokinase [Bacillus cereus BAG1X1-3]
gi|423417674|ref|ZP_17394763.1| GTP pyrophosphokinase [Bacillus cereus BAG3X2-1]
gi|228735421|gb|EEL86020.1| GTP pyrophosphokinase [Bacillus cereus AH1272]
gi|401106845|gb|EJQ14802.1| GTP pyrophosphokinase [Bacillus cereus BAG3X2-1]
gi|401641372|gb|EJS59089.1| GTP pyrophosphokinase [Bacillus cereus BAG1X1-3]
Length = 727
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/325 (33%), Positives = 163/325 (50%), Gaps = 33/325 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD +SAG L VVE ++++ + A L+ ++ +
Sbjct: 55 IQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP+ +Q I+ E ++I
Sbjct: 112 KYKSHEQQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED S RYL P Y + ++ + +D + + LK
Sbjct: 172 APLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVMTGIREKLK- 230
Query: 293 DATLADLVEDVSVQ----GRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+VS+Q GR K YS +K+ + E+ D+L +RV++ +
Sbjct: 231 ---------EVSIQPEISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKD---- 277
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+Q
Sbjct: 278 -------CYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTV-IGPKGD--PL-EVQ 326
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLT 433
IRT+EM +A G A+H YK G T
Sbjct: 327 IRTKEMHEIAEFGIAAHWAYKEGKT 351
>gi|289548947|ref|YP_003473935.1| (p)ppGpp synthetase I SpoT/RelA [Thermocrinis albus DSM 14484]
gi|289182564|gb|ADC89808.1| (p)ppGpp synthetase I, SpoT/RelA [Thermocrinis albus DSM 14484]
Length = 698
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/321 (32%), Positives = 174/321 (54%), Gaps = 24/321 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L VA++LA L +D + + AGLL ++E + Q++++R G A ++ ++ +
Sbjct: 51 LQVAIILAKLGLDRDTVVAGLLHDILEDTSTTYQELKERFGKRVADIVEGVTKLGK---V 107
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + + E A RK L DIR +++ LA RL M+ L +LPR +Q+ I+ E M+I+
Sbjct: 108 QFKDVKTEKAENYRKLLLAMAKDIRVILVKLADRLHNMKTLGHLPREKQIRIAKETMEIY 167
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
P+A+ + + ELEDL F +L+P Y V ++++++ + L D ++ + LKT
Sbjct: 168 VPIANRLGIWSIKTELEDLCFMFLYPAEYERVKSFVKANR---EQLKDYLRKHFIPVLKT 224
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
L +++ R K Y +K ++ G E+V+D+LG+RVI VNT
Sbjct: 225 HLEHHGLQAEITY--RPKHLYGIWQKTIRKGIRLEDVHDILGVRVI-------VNTVP-- 273
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I+ +++K +P + DYI+ PK N Y+SLH V + GK ++E+QIRT
Sbjct: 274 --ECYLVLGILHNIFKPVPGKFDDYISLPKPNLYQSLHTTV-IGPKGK---MVEVQIRTW 327
Query: 413 EMDMLAVNGTASHAFYKGGLT 433
EM A G A+H YK G T
Sbjct: 328 EMHERAEKGVAAHWAYKEGKT 348
>gi|312621838|ref|YP_004023451.1| (p)ppgpp synthetase i, spot/rela [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202305|gb|ADQ45632.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor
kronotskyensis 2002]
Length = 726
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 126/379 (33%), Positives = 182/379 (48%), Gaps = 36/379 (9%)
Query: 60 MVVKLVGAFNELTERMNVLSSSSS-RLLFKALKLSIPMLQSLPLSPDSRSP-LTKALSVA 117
M + L NEL ER+ +S L+ KA + + S +S P + L VA
Sbjct: 1 MNLDLSDKLNELIERVKKYASEEDINLIKKAFEFAQKHHDGQ--SRNSGEPYILHPLEVA 58
Query: 118 LLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQV 177
L+LADL++D I AGLL VVE S++ V G A L+ ++ L+
Sbjct: 59 LILADLELDIPSIVAGLLHDVVEDTSASLEDVEREFGKEIAELVDGVTKLGK---LEFTS 115
Query: 178 LDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLA 236
+ RK + DIR +++ LA RL MR L YLP +Q + E + I+APLA
Sbjct: 116 KLERQVENYRKMLIAMAKDIRVILIKLADRLHNMRTLKYLPPEKQRQKAQETIDIYAPLA 175
Query: 237 HAVATNYLSFELEDLSFRYLFPFSYL-FVDTWLRS---HETGSKPLIDIYKEQLLQCLKT 292
H + + + +ELEDLS RYL P Y V+ + E K +I + E+L +
Sbjct: 176 HRLGISKIKWELEDLSLRYLDPEGYYDLVEKIAKKRVEREEYIKRIISLISEKLKEA--- 232
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+E + GR K YS +K+ + G+ EE+ D+ +R+I+ +
Sbjct: 233 ------NIEVGQIDGRPKHFYSIYRKMKEQGKTLEEIYDLFAIRIIVNSVKD-------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II +L+K MP R KDYIA PK N Y+SLH V + G+ E+QIRT
Sbjct: 279 ---CYGVLGIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPEGEP---FEVQIRTF 331
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M A G A+H YK G
Sbjct: 332 DMHRTAEYGIAAHWKYKEG 350
>gi|229192618|ref|ZP_04319579.1| GTP pyrophosphokinase [Bacillus cereus ATCC 10876]
gi|228590925|gb|EEK48783.1| GTP pyrophosphokinase [Bacillus cereus ATCC 10876]
Length = 727
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/321 (33%), Positives = 161/321 (50%), Gaps = 25/321 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD +SAG L VVE ++++ + A L+ ++ +
Sbjct: 55 IQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP+ +Q I+ E ++I
Sbjct: 112 KYKSHEQQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED S RYL P Y + ++ + +D + + LK
Sbjct: 172 APLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVMTGIREKLKE 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
A + + GR K YS +K+ + E+ D+L +RV++ +
Sbjct: 232 VAIQPE------ISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+QIRT+
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTV-IGPKGD--PL-EVQIRTK 330
Query: 413 EMDMLAVNGTASHAFYKGGLT 433
EM +A G A+H YK G T
Sbjct: 331 EMHEIAEFGIAAHWAYKEGKT 351
>gi|392957304|ref|ZP_10322828.1| (p)ppGpp synthetase I SpoT/RelA [Bacillus macauensis ZFHKF-1]
gi|391876711|gb|EIT85307.1| (p)ppGpp synthetase I SpoT/RelA [Bacillus macauensis ZFHKF-1]
Length = 726
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/328 (33%), Positives = 172/328 (52%), Gaps = 31/328 (9%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L LQMD ++AG L VVE ++++ + DR A L+ V +
Sbjct: 49 IEVAGILVGLQMDPVTVAAGFLHDVVEDTPITLKDISDRFNEEVAMLVDG---VTKLKKI 105
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L ++ + +Q+ + E ++I
Sbjct: 106 KFKSKEEQQAENHRKMFVAMAQDIRCILIKLADRLHNMRTLKHMTKEKQIQKANETLEIF 165
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED+S RYL P Y + ++ + Y ++++ ++
Sbjct: 166 APLAHRLGISTIKWELEDVSLRYLNPQQYYRIVNLMKQKRAEREQ----YVQEVMNEIEN 221
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
T + D+S GR K YS +K++K + E+ D+L +RVI+ N+
Sbjct: 222 RLTEVQIKADIS--GRPKHIYSIYRKMVKQNKQFNEIYDLLAVRVIV---HNI------- 269
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+QIRT
Sbjct: 270 -KDCYAALGIIHTAWKPMPGRFKDYIAMPKANMYQSLHTTV-IGPKGD--PL-EVQIRTG 324
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKR 440
+M +A G A+H YK EEAK+
Sbjct: 325 DMHRVAEYGIAAHWAYK------EEAKK 346
>gi|78356612|ref|YP_388061.1| (p)ppGpp synthetase I SpoT/RelA [Desulfovibrio alaskensis G20]
gi|78219017|gb|ABB38366.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio alaskensis G20]
Length = 715
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/323 (33%), Positives = 161/323 (49%), Gaps = 25/323 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L L+VA LA +++D I+AGLL VE I+++ G A ++ ++
Sbjct: 46 LMHPLAVAHSLAKMRLDEASIAAGLLHDTVEDTSTGIEEIDSLFGEEVADIVDGVTKISQ 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + ++ A +RK L DIR LI+ LA RL M LD+ ++Q +I+ E
Sbjct: 106 ---MTFESKEEAQAENIRKMVLAMAEDIRVLIVKLADRLHNMSTLDFQKPHKQKLIAQET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M I+APLA+ + + + +LEDLS RYL P + + WL ID ++
Sbjct: 163 MDIYAPLANRLGLHRIKLQLEDLSLRYLRPDVWSQLSDWLEKKRVADSDYID----NVIS 218
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L+ D+ V+GR K S +K++ +EV DV+ RVI+ N
Sbjct: 219 LLRGMLDENDIPG--KVKGRIKHINSIYRKMVHQNLALDEVPDVIAFRVIVDDVKN---- 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY ++ + WK + R KDYI+ PKAN Y+SLH V V G+ +EIQ
Sbjct: 273 -------CYAMLGLVHAAWKPIHGRFKDYISMPKANMYQSLHTTV-VGPGGER---IEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IRTEEMD +A +G ASH YK G
Sbjct: 322 IRTEEMDRMAEHGVASHWLYKEG 344
>gi|241889887|ref|ZP_04777185.1| GTP pyrophosphokinase [Gemella haemolysans ATCC 10379]
gi|241863509|gb|EER67893.1| GTP pyrophosphokinase [Gemella haemolysans ATCC 10379]
Length = 725
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 162/320 (50%), Gaps = 27/320 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L +L++D I AG L VVE + +++ G A ++ ++ +
Sbjct: 55 VQVAGILTELKLDYATICAGFLHDVVEDTKYTFDDIKETFGEDIAVIVDGVTKLDK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + A RK F D+R + + LA RL MR + Y+ +Q IS E ++I+
Sbjct: 112 KFRSKKQSQAENHRKLFVSIAKDLRVIFVKLADRLHNMRTMKYMREEKQREISSETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETG-SKPLIDIYKEQLLQCLK 291
APLAH + + + +ELED S RYL P Y + ++ + K + D C
Sbjct: 172 APLAHRLGISSVKWELEDTSLRYLHPSQYFSIVGMMKQKRSAREKSIKD-------ACSS 224
Query: 292 TDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEV 351
+ LAD V GR K YS KK++K + +++ D+L +RV++ ++
Sbjct: 225 ITSILADNNIKAQVTGRPKHIYSIYKKMVKQNKTFDQIYDLLAVRVLVDSVAD------- 277
Query: 352 GERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRT 411
CY T ++ +LW +P R KDYIA PK N Y+SLH V ++ +G+T +E+QIRT
Sbjct: 278 ----CYATLGLVNNLWVPIPGRIKDYIAMPKPNMYQSLHTTV-IAPDGQT---LEVQIRT 329
Query: 412 EEMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 330 YEMHEIAEKGIAAHWAYKEG 349
>gi|206969775|ref|ZP_03230729.1| GTP diphosphokinase [Bacillus cereus AH1134]
gi|206735463|gb|EDZ52631.1| GTP diphosphokinase [Bacillus cereus AH1134]
Length = 727
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/321 (33%), Positives = 161/321 (50%), Gaps = 25/321 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD +SAG L VVE ++++ + A L+ ++ +
Sbjct: 55 IQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP+ +Q I+ E ++I
Sbjct: 112 KYKSHEQQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED S RYL P Y + ++ + +D + + LK
Sbjct: 172 APLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVMTGIREKLKE 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
A + + GR K YS +K+ + E+ D+L +RV++ +
Sbjct: 232 VAIQPE------ISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+QIRT+
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTV-IGPKGD--PL-EVQIRTK 330
Query: 413 EMDMLAVNGTASHAFYKGGLT 433
EM +A G A+H YK G T
Sbjct: 331 EMHEIAEFGIAAHWAYKEGKT 351
>gi|10443847|gb|AAG17607.1|AF242653_1 ppGpp synthetase/hydrolase Rel [Geobacillus stearothermophilus ATCC
7953]
Length = 732
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 165/321 (51%), Gaps = 25/321 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL+MDA I+AG L V+E + + + G A L+ ++ +
Sbjct: 55 IQVAGILVDLKMDATTIAAGFLHDVIEDTEATKEDLEREFGAEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP +Q I+ E ++I
Sbjct: 112 KYKSQEEQQAENHRKMFLAMAQDIRVILIKLADRLHNMRTLKHLPAEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ + Y E+++Q ++
Sbjct: 172 APLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAEREQ----YLEEVIQEVRE 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
L ++ + GR K YS +K++ + E+ D+L +R+I+ +
Sbjct: 228 --RLNEVHIPCEISGRPKHIYSIYRKMVMQNKQFNEIYDLLAVRIIVNSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PK N Y+SLH V + G+ PL E+QIRT
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGE--PL-EVQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGGLT 433
EM +A G A+H YK G T
Sbjct: 331 EMHQIAEFGIAAHWAYKEGKT 351
>gi|420143469|ref|ZP_14650966.1| GTP pyrophosphokinase [Lactococcus garvieae IPLA 31405]
gi|391856340|gb|EIT66880.1| GTP pyrophosphokinase [Lactococcus garvieae IPLA 31405]
Length = 741
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 187/386 (48%), Gaps = 53/386 (13%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA LQ+DA +SAG L VVE + + G A+++ ++ +
Sbjct: 55 IQVAGILAKLQLDAATVSAGFLHDVVEDTNFIQSDLVELFGEEIANIVDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ LA RL MR L L +Q IS E M I+
Sbjct: 112 EYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKNLRPDKQKRISSETMAIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + +ELEDLSFRYL + + + + L++ E+L + +K
Sbjct: 172 APLAHRLGIGSIKWELEDLSFRYLNETEFYRIRGLMNEKRAARENLVEEVIEKLNERMK- 230
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
DA + D + GR K YS +K+ + +E+ D++ +R + +S++
Sbjct: 231 DAQV-----DAEIYGRPKHIYSIYRKMHDKKKRFDEIYDLIAIRCLTNSTSDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
YTT I LWK MP R KDYIA PKANGY+S+H V G P ME QIRT
Sbjct: 279 ----YTTLGYIHDLWKPMPGRFKDYIANPKANGYQSVHTTV----YGPKGP-MEFQIRTH 329
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFEFDWR 472
EM +A G A+H YK G A + + +I T +W
Sbjct: 330 EMHQIAEYGVAAHWAYKQGRK------------------AKVDVHEISET------LNWI 365
Query: 473 DRVFRLLDKNGDGRISIEELMEVMEE 498
+ + L +++GD S EE ++ ++E
Sbjct: 366 NELVELQEQSGD---SAEEFVKAVQE 388
>gi|315503193|ref|YP_004082080.1| (p)ppGpp synthetase I SpoT/RelA [Micromonospora sp. L5]
gi|315409812|gb|ADU07929.1| (p)ppGpp synthetase I, SpoT/RelA [Micromonospora sp. L5]
Length = 823
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 167/321 (52%), Gaps = 27/321 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LA+L MD + A LL +E ++ Q+R G G LL + + +
Sbjct: 142 ITHPLAVATILANLGMDTTTLVAALLHDTIEDTEYTLDQMRADFG-GEVALLVDGVTKLD 200
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
V L D A +RK + D R L++ LA RL MR L +LPR +Q + E
Sbjct: 201 KVKLG----DAAKAETIRKMVVAMAKDPRVLVIKLADRLHNMRTLTFLPRPKQEQKAKET 256
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I APLAH + N + +ELEDL+F LFP + ++ + H+ + L+ Q+ Q
Sbjct: 257 LEILAPLAHRLGMNTIKWELEDLAFGTLFPKRFEEINRLIGEHQPQREALL----RQVTQ 312
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ TD A + + + GR K YS +K++ GR ++ D++G+R+ LV+T
Sbjct: 313 KVSTDLKAAKIKAETT--GRPKHLYSIYQKMIVRGRDFNDIYDLVGVRI-------LVDT 363
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY +I + W+ +P R KDYIA PK N Y+SLH V + GK +E+Q
Sbjct: 364 V----RDCYAALGVIHANWQPVPGRFKDYIAMPKFNMYQSLHTTV-IGPTGKP---VEMQ 415
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT M A G A+H YK
Sbjct: 416 IRTYAMHRTAEFGIAAHWKYK 436
>gi|350266929|ref|YP_004878236.1| RelA/SpoT family protein [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349599816|gb|AEP87604.1| RelA/SpoT family protein [Bacillus subtilis subsp. spizizenii
TU-B-10]
Length = 734
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/326 (33%), Positives = 168/326 (51%), Gaps = 25/326 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL+MD I+ G L VVE V++ +++ A L+ ++ +
Sbjct: 55 IQVAGILVDLEMDPSTIAGGFLHDVVEDTDVTLDDLKEAFSEEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP+ +Q IS E ++I
Sbjct: 112 KYKSQEEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ ++Y ++++ +K
Sbjct: 172 APLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAER----ELYVDEVVNEVKK 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
++ D S GR K YS +K++ + E+ D+L +R+ LVN+
Sbjct: 228 RVEEVNIKADFS--GRPKHIYSIYRKMVLQNKQFNEIYDLLAVRI-------LVNSI--- 275
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY II + WK MP R KDYIA PK N Y+SLH V + G PL E+QIRT
Sbjct: 276 -KDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGD--PL-EVQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEA 438
EM +A G A+H YK G E A
Sbjct: 331 EMHEIAEYGVAAHWAYKEGKAANEGA 356
>gi|302872388|ref|YP_003841024.1| (p)ppGpp synthetase I SpoT/RelA [Caldicellulosiruptor obsidiansis
OB47]
gi|302575247|gb|ADL43038.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor obsidiansis
OB47]
Length = 722
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 123/375 (32%), Positives = 181/375 (48%), Gaps = 36/375 (9%)
Query: 64 LVGAFNELTERMNVLSSSSS-RLLFKALKLSIPMLQSLPLSPDSRSP-LTKALSVALLLA 121
++ NEL ER+ +S L+ KA + + + S S P + L VAL+LA
Sbjct: 1 MIDRLNELIERVKRYASEEDIDLIKKAFEFAQKYHEGQARS--SGEPYIVHPLEVALILA 58
Query: 122 DLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDE 181
DL++D I AGLL VVE S++ + G A L+ ++ L+ +
Sbjct: 59 DLELDIASIVAGLLHDVVEDTSASLEDIEREFGKEIAELVDGVTKLGK---LEFTSKLER 115
Query: 182 TAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVA 240
A RK + DIR +++ LA RL MR L YLP +Q + E + I+APL H +
Sbjct: 116 QAENYRKMLIAMAKDIRVILIKLADRLHNMRTLKYLPPEKQRQKAQETIDIYAPLVHRLG 175
Query: 241 TNYLSFELEDLSFRYLFPFSYL-FVDTWLRS---HETGSKPLIDIYKEQLLQCLKTDATL 296
+ + +ELEDLS RYL P Y V+ + E K +I + E+L +
Sbjct: 176 ISKIKWELEDLSLRYLDPEGYYDLVEKIAKKRVEREEYIKRIISLISEKLKEA------- 228
Query: 297 ADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERAC 356
+E + GR K YS +K+ + G+ EE+ D+ +R+I+ + C
Sbjct: 229 --NIEVGQIDGRPKHFYSIYRKMKEQGKTLEEIYDLFAIRIIVNSVKD-----------C 275
Query: 357 YTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDM 416
Y II +L+K MP R KDYIA PK N Y+SLH V + G+ E+QIRT +M
Sbjct: 276 YGVLGIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPEGEP---FEVQIRTFDMHR 331
Query: 417 LAVNGTASHAFYKGG 431
A G A+H YK G
Sbjct: 332 TAEYGIAAHWKYKEG 346
>gi|205374215|ref|ZP_03227014.1| GTP diphosphokinase [Bacillus coahuilensis m4-4]
Length = 708
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/317 (33%), Positives = 161/317 (50%), Gaps = 25/317 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL+MDA ++AG L VVE +S Q + + A L+ ++ +
Sbjct: 31 IQVAGILADLEMDAATVAAGFLHDVVEDTPISKQDIAETFNEEVAMLVDGVTKLGK---I 87
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP +Q I+ E ++I
Sbjct: 88 KFKSQEEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPAEKQRRIANETIEIF 147
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ + +D ++ L+
Sbjct: 148 APLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRDEREQYVDDVIHEMEDSLRD 207
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
A+L GR K YS +K++ + E+ D+L +R+I+ +
Sbjct: 208 VDIHAEL------SGRPKHIYSIYRKMVLQNKQFNEIYDLLAVRIIVNSIKD-------- 253
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PK N Y+SLH V + G PL E+QIRT
Sbjct: 254 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGD--PL-EVQIRTR 306
Query: 413 EMDMLAVNGTASHAFYK 429
+M +A G A+H YK
Sbjct: 307 DMHRIAEYGVAAHWAYK 323
>gi|449095202|ref|YP_007427693.1| GTP pyrophosphokinase [Bacillus subtilis XF-1]
gi|449029117|gb|AGE64356.1| GTP pyrophosphokinase [Bacillus subtilis XF-1]
Length = 734
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/326 (33%), Positives = 168/326 (51%), Gaps = 25/326 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL+MD I+ G L VVE V++ +++ A L+ ++ +
Sbjct: 55 IQVAGILVDLEMDPSTIAGGFLHDVVEDTDVTLDDLKEAFSEEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP+ +Q IS E ++I
Sbjct: 112 KYKSQEEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ ++Y ++++ +K
Sbjct: 172 APLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAER----ELYVDEVVNEVKK 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
++ D S GR K YS +K++ + E+ D+L +R+ LVN+
Sbjct: 228 RVEEVNIKADFS--GRPKHIYSIYRKMVLQNKQFNEIYDLLAVRI-------LVNSI--- 275
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY II + WK MP R KDYIA PK N Y+SLH V + G PL E+QIRT
Sbjct: 276 -KDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGD--PL-EVQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEA 438
EM +A G A+H YK G E A
Sbjct: 331 EMHEIAEYGVAAHWAYKEGKAATEGA 356
>gi|421858233|ref|ZP_16290508.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Paenibacillus popilliae ATCC 14706]
gi|410832235|dbj|GAC40945.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Paenibacillus popilliae ATCC 14706]
Length = 725
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 160/319 (50%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA ++ +QMD + A LL VVE VS+++VR + G A L+ +++ +
Sbjct: 49 LAVADIVVGMQMDPTSVVAALLHDVVEDTSVSLKEVRTKFGNTCAMLVDGLTKLER---I 105
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ RK F DIR +++ LA RL MR L Y Q I+ E ++I
Sbjct: 106 QFRSKEEQQNENYRKMFVAMANDIRVIVIKLADRLHNMRTLKYQSEESQRRIAYETLEIF 165
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
P+AH + + + +E+ED++ RYL P Y + + + I ++ + L+
Sbjct: 166 CPIAHRLGISAIKWEMEDIALRYLNPQQYYRIANLMHKKRAEREQFITDVIARIQEKLEE 225
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ADL GR K YS KK+ + E+ D+L +R+++ N+
Sbjct: 226 MGIIADL------SGRPKHIYSVYKKMTARSKRFNEIYDLLAIRILV---DNI------- 269
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY T II +LWK MP R KDYIA PK N Y+SLH V G T E+QIRT
Sbjct: 270 -KDCYATLGIIHTLWKPMPGRFKDYIAMPKTNMYQSLHTTV----IGPTGEPTEVQIRTW 324
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM A G A+H YK G
Sbjct: 325 EMHRTAEYGIAAHWAYKEG 343
>gi|226945754|ref|YP_002800827.1| RelA/SpoT protein [Azotobacter vinelandii DJ]
gi|226720681|gb|ACO79852.1| RelA/SpoT protein [Azotobacter vinelandii DJ]
Length = 749
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/339 (33%), Positives = 171/339 (50%), Gaps = 33/339 (9%)
Query: 104 PDSRSPLTK------ALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGT 157
PD+ P L +A +LADL++D + + A +L + V +++ +V+ R G
Sbjct: 53 PDAERPAVGTSTFLVGLEIAEILADLKLDQDSLVAAVLYRGVRQKQIALDEVQRRFGQVV 112
Query: 158 AHLLHESLR---VKNNVNLKLQ-VLDDETAAA-LRKFCLTYYD-IRALILDLAIRLDMMR 211
A L+ LR + +++N + VLD +T LRK + D +R ++ LA R +R
Sbjct: 113 AKLIEGVLRMAAISDSLNPRESLVLDAQTQVENLRKMLVAMVDDVRVALIKLAERTCAIR 172
Query: 212 HLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSH 271
+ + ++ ++ EV I+APLAH + ++ +ELEDL+FRYL P Y + L
Sbjct: 173 AVKHADEERRQRVAREVSAIYAPLAHRLGIGHIKWELEDLAFRYLEPEQYKQIAKLLHER 232
Query: 272 ETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVND 331
+ I ++L + L AD + GR K YS +K+ K G ++ D
Sbjct: 233 RLDREQFIAKVVQELKEALAGAGIKAD------INGRAKHIYSIWRKMQKKGLQFSQIYD 286
Query: 332 VLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHM 391
V +RV++ EV R CYT I+ SLW+ +P DYIA PK NGYRSLH
Sbjct: 287 VRAVRVLV---------PEV--RDCYTALGIVHSLWRHIPREFDDYIANPKENGYRSLHT 335
Query: 392 AVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKG 430
AV + +GKT +E+QIRT M A G +H YKG
Sbjct: 336 AV-IGPDGKT---LEVQIRTHAMHEEAELGVCAHWRYKG 370
>gi|407706935|ref|YP_006830520.1| hypothetical protein MC28_3699 [Bacillus thuringiensis MC28]
gi|423615251|ref|ZP_17591085.1| GTP pyrophosphokinase [Bacillus cereus VD115]
gi|401260930|gb|EJR67097.1| GTP pyrophosphokinase [Bacillus cereus VD115]
gi|407384620|gb|AFU15121.1| GTP pyrophosphokinase [Bacillus thuringiensis MC28]
Length = 727
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/325 (33%), Positives = 163/325 (50%), Gaps = 33/325 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD +SAG L VVE ++++ + A L+ ++ +
Sbjct: 55 IQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP+ +Q I+ E ++I
Sbjct: 112 KYKSHEQQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED S RYL P Y + ++ + +D + + LK
Sbjct: 172 APLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVMTGIREKLK- 230
Query: 293 DATLADLVEDVSVQ----GRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+VS+Q GR K YS +K+ + E+ D+L +RV++ +
Sbjct: 231 ---------EVSIQPEISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKD---- 277
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+Q
Sbjct: 278 -------CYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTV-IGPKGD--PL-EVQ 326
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLT 433
IRT+EM +A G A+H YK G T
Sbjct: 327 IRTKEMHEIAEFGIAAHWAYKEGKT 351
>gi|302866778|ref|YP_003835415.1| RelA/SpoT family protein [Micromonospora aurantiaca ATCC 27029]
gi|302569637|gb|ADL45839.1| RelA/SpoT family protein [Micromonospora aurantiaca ATCC 27029]
Length = 823
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 167/321 (52%), Gaps = 27/321 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LA+L MD + A LL +E ++ Q+R G G LL + + +
Sbjct: 142 ITHPLAVATILANLGMDTTTLVAALLHDTIEDTEYTLDQMRADFG-GEVALLVDGVTKLD 200
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
V L D A +RK + D R L++ LA RL MR L +LPR +Q + E
Sbjct: 201 KVKLG----DAAKAETIRKMVVAMAKDPRVLVIKLADRLHNMRTLTFLPRPKQEQKAKET 256
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I APLAH + N + +ELEDL+F LFP + ++ + H+ + L+ Q+ Q
Sbjct: 257 LEILAPLAHRLGMNTIKWELEDLAFGTLFPKRFEEINRLIGEHQPQREALL----RQVTQ 312
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ TD A + + + GR K YS +K++ GR ++ D++G+R+ LV+T
Sbjct: 313 KVSTDLKAAKIKAETT--GRPKHLYSIYQKMIVRGRDFNDIYDLVGVRI-------LVDT 363
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY +I + W+ +P R KDYIA PK N Y+SLH V + GK +E+Q
Sbjct: 364 V----RDCYAALGVIHANWQPVPGRFKDYIAMPKFNMYQSLHTTV-IGPTGKP---VEMQ 415
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT M A G A+H YK
Sbjct: 416 IRTYAMHRTAEFGIAAHWKYK 436
>gi|229032057|ref|ZP_04188039.1| GTP pyrophosphokinase [Bacillus cereus AH1271]
gi|228729249|gb|EEL80244.1| GTP pyrophosphokinase [Bacillus cereus AH1271]
Length = 727
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/325 (33%), Positives = 163/325 (50%), Gaps = 33/325 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD +SAG L VVE ++++ + A L+ ++ +
Sbjct: 55 IQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP+ +Q I+ E ++I
Sbjct: 112 KYKSHEQQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED S RYL P Y + ++ + +D + + LK
Sbjct: 172 APLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVMTGIREKLK- 230
Query: 293 DATLADLVEDVSVQ----GRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+VS+Q GR K YS +K+ + E+ D+L +RV++ +
Sbjct: 231 ---------EVSIQPEISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKD---- 277
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+Q
Sbjct: 278 -------CYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTV-IGPKGD--PL-EVQ 326
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLT 433
IRT+EM +A G A+H YK G T
Sbjct: 327 IRTKEMHEIAEFGIAAHWAYKEGKT 351
>gi|157693164|ref|YP_001487626.1| GTP diphosphokinase [Bacillus pumilus SAFR-032]
gi|157681922|gb|ABV63066.1| GTP diphosphokinase [Bacillus pumilus SAFR-032]
Length = 736
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/324 (32%), Positives = 167/324 (51%), Gaps = 25/324 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL+MD I+ G L VVE V++Q +++ A L+ ++ +
Sbjct: 55 IQVAGILVDLEMDPSTIAGGFLHDVVEDTDVTLQDLKEHFNEEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP+ +Q IS E ++I
Sbjct: 112 KYKSQEEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ + +D +++ +K
Sbjct: 172 APLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKRKRAEREEYLD----EVVNEVKD 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ + S GR K YS +K++ + E+ D+L +R+++ +
Sbjct: 228 RVSEVNIKAEFS--GRPKHIYSIYRKMVLQNKQFNEIYDLLAVRILVDSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PK N Y+SLH V + G PL E+QIRT
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGD--PL-EVQIRTV 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPE 436
EM +A G A+H YK G + E
Sbjct: 331 EMHEIAEYGIAAHWAYKEGKESAE 354
>gi|423521737|ref|ZP_17498210.1| GTP pyrophosphokinase [Bacillus cereus HuA4-10]
gi|401176399|gb|EJQ83594.1| GTP pyrophosphokinase [Bacillus cereus HuA4-10]
Length = 727
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/325 (33%), Positives = 163/325 (50%), Gaps = 33/325 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD +SAG L VVE ++++ + A L+ ++ +
Sbjct: 55 IQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP+ +Q I+ E ++I
Sbjct: 112 KYKSHEQQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED S RYL P Y + ++ + +D + + LK
Sbjct: 172 APLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVMTGIREKLK- 230
Query: 293 DATLADLVEDVSVQ----GRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+VS+Q GR K YS +K+ + E+ D+L +RV++ +
Sbjct: 231 ---------EVSIQPEISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKD---- 277
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+Q
Sbjct: 278 -------CYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTV-IGPKGD--PL-EVQ 326
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLT 433
IRT+EM +A G A+H YK G T
Sbjct: 327 IRTKEMHEIAEFGIAAHWAYKEGKT 351
>gi|346225865|ref|ZP_08847007.1| (p)ppGpp synthetase I, SpoT/RelA [Anaerophaga thermohalophila DSM
12881]
Length = 744
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 120/371 (32%), Positives = 193/371 (52%), Gaps = 33/371 (8%)
Query: 68 FNELTERMNVLSSSSSR-LLFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLAD-LQM 125
FNEL E ++ R L+ KA L+ + + L L+VA ++AD + +
Sbjct: 17 FNELIELCPRCQTAEGRKLIQKAFDLANEAHKGVRRKSGELYIL-HPLAVARIVADEIGL 75
Query: 126 DAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDET--- 182
A+ ++A LL VVE ++ + G A ++ + L KL + D+T
Sbjct: 76 GAKGVAAALLHDVVEDTDYTLDDIEGIFGEKVAGIV-DGL-------TKLDGVFDQTRSK 127
Query: 183 -AAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVA 240
A RK LT DIR +++ LA RL MR LD +P +++L I+ E + ++APLAH +
Sbjct: 128 QAENFRKLLLTMVEDIRVILIKLADRLHNMRTLDSMPEHKRLKIAGETLYLYAPLAHRLG 187
Query: 241 TNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLV 300
+ ELEDL+ +Y P Y + + L ++ +K LI + +++ L ++ D
Sbjct: 188 LYSIKSELEDLALKYEHPKIYQEISSKLTDYQNKTKHLITRFSLPIIERLSSEGYEFD-- 245
Query: 301 EDVSVQGRYKSRYSTMKKLLKDGRIP-EEVNDVLGLRVIIKPSSNLVNTSEVGERACYTT 359
++GR KS YS +K+ K +IP EEV D+L +R++ KP+ + ++ C+T
Sbjct: 246 ----IKGRPKSIYSIWRKMQKK-QIPFEEVYDLLAIRIVFKPNPGIPEKAQ-----CWTI 295
Query: 360 REIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAV 419
+I ++K P R +D+++ PKANGY +LH V G +EIQIRTE MD +A
Sbjct: 296 YSLITDIYKPKPDRLRDWVSTPKANGYEALHATV----MGPEGNWIEIQIRTERMDEIAE 351
Query: 420 NGTASHAFYKG 430
G A+H YKG
Sbjct: 352 RGFAAHWKYKG 362
>gi|168046238|ref|XP_001775581.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672999|gb|EDQ59528.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 886
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/322 (32%), Positives = 174/322 (54%), Gaps = 12/322 (3%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVE-SGGVSIQQVRDRIGIGTAHLLHESLRVKNNVN 172
+ VA +L + +MD E I AGLL VE + V+ +++ D+ G +L ++V
Sbjct: 156 VEVARILGEQEMDWETIVAGLLHDTVEDTEHVTFERIEDQFGPAVRRILKLDVQVSKLGK 215
Query: 173 LKLQVLD----DETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLE 227
++ Q D D A LR+ F ++R +I+ LA RL MR L ++P ++Q I++E
Sbjct: 216 MQCQNSDSLGKDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQKYIAME 275
Query: 228 VMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLL 287
+++ APLA + + + ELE+LSF + +P + + + + + ++ K+ L
Sbjct: 276 TLQVFAPLAKLLGMHRIKSELEELSFMFAYPEEHAELKLRVEALRKTQEDVVVEAKKVLY 335
Query: 288 QCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDV--LGLRVI--IKPSS 343
+ + D L + ED+ V K YS KK+ EEV D+ + LR++ +KP++
Sbjct: 336 ETISRDQFLGYMTEDIKVATLSKQLYSIYKKIADQKISAEEVRDIAQVWLRIVLKLKPAT 395
Query: 344 NLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRP 403
++ + V ++ CY ++ ++W +P KDYIA PK NGY+SLH V + +T
Sbjct: 396 SVGHLCNV-QQVCYHVLGLVHAMWPPLPQTMKDYIATPKPNGYQSLHTTV-IPFGTQTYF 453
Query: 404 LMEIQIRTEEMDMLAVNGTASH 425
+EIQIRTEEMD LA G A+H
Sbjct: 454 PIEIQIRTEEMDKLAEWGIAAH 475
>gi|15672088|ref|NP_266262.1| ppGpp synthetase I [Lactococcus lactis subsp. lactis Il1403]
gi|12722952|gb|AAK04204.1|AE006249_1 ppGpp synthetase I [Lactococcus lactis subsp. lactis Il1403]
Length = 740
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/341 (32%), Positives = 171/341 (50%), Gaps = 26/341 (7%)
Query: 116 VALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKL 175
VA +LA L++DA +S G L VVE + +++ G A ++ ++ ++
Sbjct: 57 VAGILAKLKLDAVTVSCGFLHDVVEDTNFTQGDLQELFGDEIAEIVDGVTKLGK---VEY 113
Query: 176 QVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAP 234
+ +++ A RK + DIR +++ LA RL MR L +L +Q IS E M+I+AP
Sbjct: 114 KSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRPDKQKRISRETMEIYAP 173
Query: 235 LAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDA 294
LAH + + +ELEDLSFRYL + + + T + L+ +++ L+
Sbjct: 174 LAHRLGIASIKWELEDLSFRYLEEAEFYRIRGLMNEKRTAREALV----AEVIGKLQERV 229
Query: 295 TLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGER 354
A + D + GR K YS +K+ + +E+ D++ +R I + +S++
Sbjct: 230 EKAGV--DAEIYGRPKHIYSIYRKMHDKKKRFDEIYDLIAIRCITETTSDV--------- 278
Query: 355 ACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEM 414
YTT I LWK MP R KDYIA PKANGY+S+H V G P ME QIRT EM
Sbjct: 279 --YTTLGYIHDLWKPMPGRFKDYIANPKANGYQSVHTTV----YGPKGP-MEFQIRTREM 331
Query: 415 DMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALR 455
+A G A+H YK G+ + + + EL LR
Sbjct: 332 HQIAEFGVAAHWAYKQGIKAKVDVHEISETLNWIHELVELR 372
>gi|423512518|ref|ZP_17489049.1| GTP pyrophosphokinase [Bacillus cereus HuA2-1]
gi|402449489|gb|EJV81326.1| GTP pyrophosphokinase [Bacillus cereus HuA2-1]
Length = 727
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/325 (33%), Positives = 163/325 (50%), Gaps = 33/325 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD +SAG L VVE ++++ + A L+ ++ +
Sbjct: 55 IQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP+ +Q I+ E ++I
Sbjct: 112 KYKSHEQQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED S RYL P Y + ++ + +D + + LK
Sbjct: 172 APLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVMTGIREKLK- 230
Query: 293 DATLADLVEDVSVQ----GRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+VS+Q GR K YS +K+ + E+ D+L +RV++ +
Sbjct: 231 ---------EVSIQPEISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKD---- 277
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+Q
Sbjct: 278 -------CYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTV-IGPKGD--PL-EVQ 326
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLT 433
IRT+EM +A G A+H YK G T
Sbjct: 327 IRTKEMHEIAEFGIAAHWAYKEGKT 351
>gi|376294946|ref|YP_005166176.1| (p)ppGpp synthetase I SpoT/RelA [Desulfovibrio desulfuricans ND132]
gi|323457507|gb|EGB13372.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio desulfuricans
ND132]
Length = 737
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 178/362 (49%), Gaps = 44/362 (12%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ ++VA LLAD+Q+D ++AGLL VE ++ ++ + G A ++ ++ +
Sbjct: 46 ISHPMNVAYLLADMQLDEATVAAGLLHDTVEDTDTTVDEIEELFGSDVADIVDGVTKI-S 104
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ + + + + A +RK L DIR L++ LA RL MR L+Y+ +Q +I+ E
Sbjct: 105 RMDFESKAV--QQAENIRKLILAMAEDIRVLMVKLADRLHNMRTLEYMKPVKQRLIAQET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
I+APLA+ + + + ELEDL RYL P Y + + H +P ID
Sbjct: 163 QDIYAPLANRLGLHRVKTELEDLCLRYLRPDVYAQLSEAVHEHRAAGEPYID-------- 214
Query: 289 CLKTDATLADLVEDVSVQGRYKSR----YSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSN 344
K + D+++ ++GR R +S K+ + G +E+ D++ RVI+ +
Sbjct: 215 --KVIGLITDMLKKNKIKGRVFGRTKHLHSIQVKMEQQGLTFDEIYDLIAFRVIVGSLKD 272
Query: 345 LVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPL 404
CY +I + W+ +P R KDYI+ PKAN Y+SLH V D +
Sbjct: 273 -----------CYAVLGLIHAAWRPVPGRFKDYISIPKANMYQSLHTTVMGPDGER---- 317
Query: 405 MEIQIRTEEMDMLAVNGTASHAFYK-----------GGLTNPEEAKRLKAIMLAAAELAA 453
+EIQIRTEEM +A G A+H YK G + E LK IM EL+
Sbjct: 318 IEIQIRTEEMHRIAEYGVAAHWQYKEVGKGAKKGKTAGRRDAERYTWLKQIMDWQRELSD 377
Query: 454 LR 455
R
Sbjct: 378 PR 379
>gi|424070098|ref|ZP_17807535.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pseudomonas syringae pv. avellanae str. ISPaVe037]
gi|408001312|gb|EKG41629.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pseudomonas syringae pv. avellanae str. ISPaVe037]
Length = 701
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 162/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + + + G A L+ V
Sbjct: 46 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALSAQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ ++P ++ ++ K L++ +E L
Sbjct: 163 LEIYAPIANRLGMHSVRIEFEDLGFKAMYPMGSSRINQAVKRARGNRKELVNKIEESLSH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D D V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAVDGIEGD------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|229076038|ref|ZP_04209009.1| GTP pyrophosphokinase [Bacillus cereus Rock4-18]
gi|229098881|ref|ZP_04229817.1| GTP pyrophosphokinase [Bacillus cereus Rock3-29]
gi|229105045|ref|ZP_04235697.1| GTP pyrophosphokinase [Bacillus cereus Rock3-28]
gi|229117906|ref|ZP_04247268.1| GTP pyrophosphokinase [Bacillus cereus Rock1-3]
gi|423377736|ref|ZP_17355020.1| GTP pyrophosphokinase [Bacillus cereus BAG1O-2]
gi|423440844|ref|ZP_17417750.1| GTP pyrophosphokinase [Bacillus cereus BAG4X2-1]
gi|423448988|ref|ZP_17425867.1| GTP pyrophosphokinase [Bacillus cereus BAG5O-1]
gi|423463908|ref|ZP_17440676.1| GTP pyrophosphokinase [Bacillus cereus BAG6O-1]
gi|423533272|ref|ZP_17509690.1| GTP pyrophosphokinase [Bacillus cereus HuB2-9]
gi|423541473|ref|ZP_17517864.1| GTP pyrophosphokinase [Bacillus cereus HuB4-10]
gi|423547709|ref|ZP_17524067.1| GTP pyrophosphokinase [Bacillus cereus HuB5-5]
gi|423622506|ref|ZP_17598284.1| GTP pyrophosphokinase [Bacillus cereus VD148]
gi|228665563|gb|EEL21043.1| GTP pyrophosphokinase [Bacillus cereus Rock1-3]
gi|228678355|gb|EEL32580.1| GTP pyrophosphokinase [Bacillus cereus Rock3-28]
gi|228684554|gb|EEL38496.1| GTP pyrophosphokinase [Bacillus cereus Rock3-29]
gi|228707072|gb|EEL59274.1| GTP pyrophosphokinase [Bacillus cereus Rock4-18]
gi|401129582|gb|EJQ37265.1| GTP pyrophosphokinase [Bacillus cereus BAG5O-1]
gi|401172661|gb|EJQ79882.1| GTP pyrophosphokinase [Bacillus cereus HuB4-10]
gi|401179430|gb|EJQ86603.1| GTP pyrophosphokinase [Bacillus cereus HuB5-5]
gi|401260626|gb|EJR66794.1| GTP pyrophosphokinase [Bacillus cereus VD148]
gi|401636002|gb|EJS53756.1| GTP pyrophosphokinase [Bacillus cereus BAG1O-2]
gi|402417505|gb|EJV49805.1| GTP pyrophosphokinase [Bacillus cereus BAG4X2-1]
gi|402420175|gb|EJV52446.1| GTP pyrophosphokinase [Bacillus cereus BAG6O-1]
gi|402463491|gb|EJV95191.1| GTP pyrophosphokinase [Bacillus cereus HuB2-9]
Length = 727
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/325 (33%), Positives = 163/325 (50%), Gaps = 33/325 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD +SAG L VVE ++++ + A L+ ++ +
Sbjct: 55 IQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP+ +Q I+ E ++I
Sbjct: 112 KYKSHEQQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED S RYL P Y + ++ + +D + + LK
Sbjct: 172 APLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVMTGIREKLK- 230
Query: 293 DATLADLVEDVSVQ----GRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+VS+Q GR K YS +K+ + E+ D+L +RV++ +
Sbjct: 231 ---------EVSIQPEISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKD---- 277
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+Q
Sbjct: 278 -------CYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTV-IGPKGD--PL-EVQ 326
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLT 433
IRT+EM +A G A+H YK G T
Sbjct: 327 IRTKEMHEIAEFGIAAHWAYKEGKT 351
>gi|75760574|ref|ZP_00740607.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74491943|gb|EAO55126.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 727
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/321 (33%), Positives = 161/321 (50%), Gaps = 25/321 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD +SAG L VVE ++++ + A L+ ++ +
Sbjct: 55 IQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP+ +Q I+ E ++I
Sbjct: 112 KYKSHEQQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED S RYL P Y + ++ + +D + + LK
Sbjct: 172 APLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVMTGIREKLKE 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
A + + GR K YS +K+ + E+ D+L +RV++ +
Sbjct: 232 VAIQPE------ISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+QIRT+
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHSTV-IGPKGD--PL-EVQIRTK 330
Query: 413 EMDMLAVNGTASHAFYKGGLT 433
EM +A G A+H YK G T
Sbjct: 331 EMHEIAEFGIAAHWAYKEGKT 351
>gi|221310698|ref|ZP_03592545.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str. 168]
gi|221315022|ref|ZP_03596827.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str. NCIB
3610]
gi|221319943|ref|ZP_03601237.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221324224|ref|ZP_03605518.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str. SMY]
gi|255767631|ref|NP_390638.2| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str. 168]
gi|321312288|ref|YP_004204575.1| GTP pyrophosphokinase [Bacillus subtilis BSn5]
gi|384176340|ref|YP_005557725.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|386759315|ref|YP_006232531.1| GTP diphosphokinase [Bacillus sp. JS]
gi|402776914|ref|YP_006630858.1| GTP pyrophosphokinase RelA/SpoT [Bacillus subtilis QB928]
gi|418032062|ref|ZP_12670545.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str. SC-8]
gi|428280212|ref|YP_005561947.1| GTP pyrophosphokinase [Bacillus subtilis subsp. natto BEST195]
gi|430755894|ref|YP_007208735.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate) 3'
pyrophosphohydrolase [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|452915236|ref|ZP_21963862.1| GTP pyrophosphokinase [Bacillus subtilis MB73/2]
gi|251757446|sp|O54408.3|RELA_BACSU RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
I
gi|2739435|gb|AAC46041.1| (p)ppGpp synthetase [Bacillus subtilis subsp. subtilis str. JH642]
gi|225185259|emb|CAB14719.2| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis subsp.
subtilis str. 168]
gi|291485169|dbj|BAI86244.1| GTP pyrophosphokinase [Bacillus subtilis subsp. natto BEST195]
gi|320018562|gb|ADV93548.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis BSn5]
gi|349595564|gb|AEP91751.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|351470925|gb|EHA31046.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str. SC-8]
gi|384932597|gb|AFI29275.1| GTP diphosphokinase [Bacillus sp. JS]
gi|402482094|gb|AFQ58603.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis QB928]
gi|407959953|dbj|BAM53193.1| GTP pyrophosphokinase [Bacillus subtilis BEST7613]
gi|407965596|dbj|BAM58835.1| GTP pyrophosphokinase [Bacillus subtilis BEST7003]
gi|430020414|gb|AGA21020.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate) 3'
pyrophosphohydrolase [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|452115584|gb|EME05980.1| GTP pyrophosphokinase [Bacillus subtilis MB73/2]
Length = 734
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/326 (33%), Positives = 168/326 (51%), Gaps = 25/326 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL+MD I+ G L VVE V++ +++ A L+ ++ +
Sbjct: 55 IQVAGILVDLEMDPSTIAGGFLHDVVEDTDVTLDDLKEAFSEEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP+ +Q IS E ++I
Sbjct: 112 KYKSQEEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ ++Y ++++ +K
Sbjct: 172 APLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAER----ELYVDEVVNEVKK 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
++ D S GR K YS +K++ + E+ D+L +R+ LVN+
Sbjct: 228 RVEEVNIKADFS--GRPKHIYSIYRKMVLQNKQFNEIYDLLAVRI-------LVNSI--- 275
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY II + WK MP R KDYIA PK N Y+SLH V + G PL E+QIRT
Sbjct: 276 -KDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGD--PL-EVQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEA 438
EM +A G A+H YK G E A
Sbjct: 331 EMHEIAEYGVAAHWAYKEGKAANEGA 356
>gi|347520664|ref|YP_004778235.1| GTP pyrophosphokinase [Lactococcus garvieae ATCC 49156]
gi|385832027|ref|YP_005869802.1| GTP pyrophosphokinase [Lactococcus garvieae Lg2]
gi|343179232|dbj|BAK57571.1| GTP pyrophosphokinase [Lactococcus garvieae ATCC 49156]
gi|343181180|dbj|BAK59518.1| GTP pyrophosphokinase [Lactococcus garvieae Lg2]
Length = 741
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 163/319 (51%), Gaps = 26/319 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA LQ+DA +SAG L VVE + + G A+++ ++ +
Sbjct: 55 IQVAGILAKLQLDAATVSAGFLHDVVEDTNFIQSDLVELFGEEIANIVDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ LA RL MR L L +Q IS E M I+
Sbjct: 112 EYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKNLRPDKQKRISSETMAIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + +ELEDLSFRYL + + + + L++ E+L + +K
Sbjct: 172 APLAHRLGIGSIKWELEDLSFRYLNETEFYRIRGLMNEKRAARENLVEEVIEKLNERMK- 230
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
DA + D + GR K YS +K+ + +E+ D++ +R + +S++
Sbjct: 231 DAQV-----DAEIYGRPKHIYSIYRKMHDKKKRFDEIYDLIAIRCLTNSTSDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
YTT I LWK MP R KDYIA PKANGY+S+H V G P ME QIRT
Sbjct: 279 ----YTTLGYIHDLWKPMPGRFKDYIANPKANGYQSVHTTV----YGPKGP-MEFQIRTH 329
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 330 EMHQIAEYGVAAHWAYKQG 348
>gi|229062102|ref|ZP_04199427.1| GTP pyrophosphokinase [Bacillus cereus AH603]
gi|228717254|gb|EEL68929.1| GTP pyrophosphokinase [Bacillus cereus AH603]
Length = 727
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 110/325 (33%), Positives = 163/325 (50%), Gaps = 33/325 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD +SAG L VVE ++++ + A L+ ++ +
Sbjct: 55 IQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP+ +Q I+ E ++I
Sbjct: 112 KYKSHEQQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED S RYL P Y + ++ + +D + + LK
Sbjct: 172 APLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVMTGIREKLK- 230
Query: 293 DATLADLVEDVSVQ----GRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+VS+Q GR K YS +K+ + E+ D+L +RV++ +
Sbjct: 231 ---------EVSIQPEISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKD---- 277
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+Q
Sbjct: 278 -------CYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTV-IGPKGD--PL-EVQ 326
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLT 433
IRT+EM +A G A+H YK G T
Sbjct: 327 IRTKEMHEIAEFGIAAHWAYKEGKT 351
>gi|296331695|ref|ZP_06874164.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305675346|ref|YP_003867018.1| GTP pyrophosphokinase RelA/SpoT [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296151290|gb|EFG92170.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305413590|gb|ADM38709.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 734
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 110/326 (33%), Positives = 168/326 (51%), Gaps = 25/326 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL+MD I+ G L VVE V++ +++ A L+ ++ +
Sbjct: 55 IQVAGILVDLEMDPSTIAGGFLHDVVEDTDVTLDDLKEAFSEEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP+ +Q IS E ++I
Sbjct: 112 KYKSQEEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ ++Y ++++ +K
Sbjct: 172 APLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAER----ELYVDEVVNEVKK 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
++ D S GR K YS +K++ + E+ D+L +R+ LVN+
Sbjct: 228 RVEEVNIKADFS--GRPKHIYSIYRKMVLQNKQFNEIYDLLAVRI-------LVNSI--- 275
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY II + WK MP R KDYIA PK N Y+SLH V + G PL E+QIRT
Sbjct: 276 -KDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGD--PL-EVQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEA 438
EM +A G A+H YK G E A
Sbjct: 331 EMHEIAEYGVAAHWAYKEGKAANEGA 356
>gi|281490569|ref|YP_003352549.1| GTP pyrophosphokinase/guanosine-3,5-bis(diphosphate)
3-pyrophosphohydrolase [Lactococcus lactis subsp. lactis
KF147]
gi|385829681|ref|YP_005867494.1| GTP pyrophosphokinase [Lactococcus lactis subsp. lactis CV56]
gi|418039046|ref|ZP_12677357.1| GTP diphosphokinase [Lactococcus lactis subsp. cremoris CNCM
I-1631]
gi|281374387|gb|ADA63920.1| GTP pyrophosphokinase / Guanosine-3,5-bis(Diphosphate)
3-pyrophosphohydrolase [Lactococcus lactis subsp. lactis
KF147]
gi|326405689|gb|ADZ62760.1| GTP pyrophosphokinase [Lactococcus lactis subsp. lactis CV56]
gi|354692622|gb|EHE92439.1| GTP diphosphokinase [Lactococcus lactis subsp. cremoris CNCM
I-1631]
gi|374672178|dbj|BAL50069.1| GTP pyrophosphokinase [Lactococcus lactis subsp. lactis IO-1]
Length = 740
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 111/341 (32%), Positives = 171/341 (50%), Gaps = 26/341 (7%)
Query: 116 VALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKL 175
VA +LA L++DA +S G L VVE + +++ G A ++ ++ ++
Sbjct: 57 VAGILAKLKLDAVTVSCGFLHDVVEDTNFTQGDLQELFGDEIAEIVDGVTKLGK---VEY 113
Query: 176 QVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAP 234
+ +++ A RK + DIR +++ LA RL MR L +L +Q IS E M+I+AP
Sbjct: 114 KSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRPDKQKRISRETMEIYAP 173
Query: 235 LAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDA 294
LAH + + +ELEDLSFRYL + + + T + L+ +++ L+
Sbjct: 174 LAHRLGIASIKWELEDLSFRYLEEAEFYRIRGLMNEKRTAREALV----AEVIGKLQERV 229
Query: 295 TLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGER 354
A + D + GR K YS +K+ + +E+ D++ +R I + +S++
Sbjct: 230 EKAGV--DAEIYGRPKHIYSIYRKMHDKKKRFDEIYDLIAIRCITETTSDV--------- 278
Query: 355 ACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEM 414
YTT I LWK MP R KDYIA PKANGY+S+H V G P ME QIRT EM
Sbjct: 279 --YTTLGYIHDLWKPMPGRFKDYIANPKANGYQSVHTTV----YGPKGP-MEFQIRTREM 331
Query: 415 DMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALR 455
+A G A+H YK G+ + + + EL LR
Sbjct: 332 HQIAEFGVAAHWAYKQGIKAKVDVHEISETLNWIHELVELR 372
>gi|410093799|ref|ZP_11290269.1| RelA/SpoT protein [Pseudomonas viridiflava UASWS0038]
gi|409758824|gb|EKN44087.1| RelA/SpoT protein [Pseudomonas viridiflava UASWS0038]
Length = 701
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 162/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + + + G A L+ V
Sbjct: 46 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALSAQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ ++P ++ ++ K L++ +E L
Sbjct: 163 LEIYAPIANRLGMHSVRIEFEDLGFKAMYPMRSSRINQAVKRARGNRKELVNKIEESLSH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D D V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAVDGIEGD------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|333919490|ref|YP_004493071.1| GTP diphosphokinase [Amycolicicoccus subflavus DQS3-9A1]
gi|333481711|gb|AEF40271.1| GTP diphosphokinase [Amycolicicoccus subflavus DQS3-9A1]
Length = 730
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 115/327 (35%), Positives = 167/327 (51%), Gaps = 39/327 (11%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LA+L MD + A LL VE G S++Q+R+ G AHL V
Sbjct: 49 ITHPLAVASILAELGMDTTTLIAALLHDTVEDTGYSLEQLREDFGEEVAHL------VDG 102
Query: 170 NVNLKLQVLDDETAA-ALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLE 227
L VL A +RK + D R L++ +A RL MR + +LP +Q + E
Sbjct: 103 VTKLDKVVLGSAAEAETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLPPEKQARKARE 162
Query: 228 VMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSY-----LFVDTWLRSHETGSKPLIDIY 282
+++ APLAH + + +ELEDL+F L P Y L D P DIY
Sbjct: 163 TLEVIAPLAHRLGMATVKWELEDLAFAILHPKRYEEIVRLVAD---------RAPSRDIY 213
Query: 283 KEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPS 342
E++ + + + A L + V+GR K +S +K++ G+ +E++D++G+RV+
Sbjct: 214 LEKVRKQIDDALSAAKL--NAVVEGRPKHYWSIYQKMIVKGKDFDEIHDLVGIRVL---- 267
Query: 343 SNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTR 402
EV R CY ++ SLW+ M R KDYIA+P+ Y+SLH V V GK
Sbjct: 268 -----CDEV--RGCYAAVGVVHSLWQPMAQRFKDYIAQPRYGVYQSLHTTV-VGPEGK-- 317
Query: 403 PLMEIQIRTEEMDMLAVNGTASHAFYK 429
PL E+QIRT EM A G A+H YK
Sbjct: 318 PL-EVQIRTHEMHRTAEYGIAAHWRYK 343
>gi|222100829|ref|YP_002535397.1| (P)ppGpp synthetase [Thermotoga neapolitana DSM 4359]
gi|221573219|gb|ACM24031.1| (P)ppGpp synthetase [Thermotoga neapolitana DSM 4359]
Length = 714
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 116/365 (31%), Positives = 183/365 (50%), Gaps = 36/365 (9%)
Query: 74 RMNVLSSSSSRLLFKALKLSIPMLQSLP-LSPDSRSPLTKALSVALLLADLQMDAEVISA 132
R S RLL KA + + + + S D ++ + VA +LA+L +D+ ++A
Sbjct: 22 RKKNFSREEKRLLMKAYEFAWIVHEGQKRFSGDPF--ISHPVEVAKILAELGVDSTTLAA 79
Query: 133 GLLRQVVESG-GVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDD-----ETAAAL 186
LL +E G GVS+ Q+++ G A ++ +V +++N + D ET +
Sbjct: 80 ALLHDTIEDGEGVSLDQIKELFGNEIARIVDGVTKV-SSINAPVGPDQDSRKRMETIQKM 138
Query: 187 RKFCLTYYDIRALILDLAIRLDMMRHLDYL--PRYQQLMISLEVMKIHAPLAHAVATNYL 244
F D+R + + LA RL MR + Y+ P ++ + E ++++APLAH + +
Sbjct: 139 --FLAMAEDMRVIFVKLADRLHNMRTIQYVQDPEKKKYK-AYETLEVYAPLAHKLGIYSI 195
Query: 245 SFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVS 304
ELEDL+F+ L+P Y + + + + + Y L L+ A +
Sbjct: 196 KSELEDLAFKVLYPEEYYRIKELVAEKKKEREKRTNEYISILKSALEEHRIKA------T 249
Query: 305 VQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQ 364
V+GRYK YS +K+ + G+ EE+ D++ LRV++K + CYT I+
Sbjct: 250 VEGRYKHYYSIWRKMKEKGKKFEEIYDLIALRVVVKDVTT-----------CYTVLGIVH 298
Query: 365 SLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTAS 424
++WK +P R KDYIA PK+NGYRSLH V G PL EIQIR EEM A G +
Sbjct: 299 NIWKPLPGRFKDYIAAPKSNGYRSLHTTV---ITGYGEPL-EIQIRDEEMHREAEYGLIA 354
Query: 425 HAFYK 429
H YK
Sbjct: 355 HWIYK 359
>gi|381179641|ref|ZP_09888490.1| (p)ppGpp synthetase I, SpoT/RelA [Treponema saccharophilum DSM
2985]
gi|380768465|gb|EIC02455.1| (p)ppGpp synthetase I, SpoT/RelA [Treponema saccharophilum DSM
2985]
Length = 613
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 167/327 (51%), Gaps = 36/327 (11%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ V LLA+ MDA+ I+ G L + E G++ +V R G A ++ ++ ++ +L
Sbjct: 66 MRVGALLAEKGMDAQCIACGFLHSIFEIDGITTDEVESRFGKTIASIVRDTSKI---TSL 122
Query: 174 KLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K+ + A ++RK D +R +++ LA RLD MR+L + +Q +++ EV+ I
Sbjct: 123 KINSKTIQQADSIRKMLFAMIDDVRVILVKLADRLDRMRNLKAIAPKKQRLVAAEVLDIW 182
Query: 233 APLAHAVATNYLSFELEDLSFRYLFP--FSYLFVDTWLRSHETGS---KPLIDIYKEQLL 287
APLA + + E+EDLS +Y P F + + E + K + +IYK
Sbjct: 183 APLADRLGMQNVKSEMEDLSLKYANPDVFQQIKRIVAQKKDERAAYLEKAVNEIYKRAEK 242
Query: 288 QCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVN 347
+K V + R K YS +K+ K + +E+ D+L LR+I
Sbjct: 243 IGIK-----------VQITSRAKHFYSIYQKMRKRNKGADELYDLLALRII------CTT 285
Query: 348 TSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEI 407
T+E CYT I+ LWK M R KDYIA PK+NGY+SLH V + +PL EI
Sbjct: 286 TTE-----CYTLIGIVHGLWKPMDGRFKDYIAMPKSNGYQSLHTTVVC----EGKPL-EI 335
Query: 408 QIRTEEMDMLAVNGTASHAFYKGGLTN 434
QIRT +M +A +G ASH YK G+ +
Sbjct: 336 QIRTADMHNMAEHGIASHWLYKKGMNH 362
>gi|339441909|ref|YP_004707914.1| guanosine polyphosphate pyrophosphohydrolase/synthetases
[Clostridium sp. SY8519]
gi|338901310|dbj|BAK46812.1| guanosine polyphosphate pyrophosphohydrolase/synthetases
[Clostridium sp. SY8519]
Length = 779
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 171/331 (51%), Gaps = 31/331 (9%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L VA++LADL+MD E I AGLL V E G++++++ + A LL + + N ++
Sbjct: 82 LCVAIILADLEMDKETIVAGLLHDVAEDTGMTLEELAEDFNDEVA-LLVDGVTKLNQLSY 140
Query: 174 KLQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHA 233
++ + + F DIR +I+ LA RL MR L ++ +Q + E M+I+A
Sbjct: 141 DADKIEVQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLQFMKPEKQKEKARETMEIYA 200
Query: 234 PLAHAVATNYLSFELEDLSFRYLFPFSY--LFVDTWLRSHETGSKPLIDIYKEQLLQCLK 291
P+A + + + ELEDLS +YL P +Y L LR E D Y + L++ +K
Sbjct: 201 PIAQRLGISSIKVELEDLSLKYLEPEAYYDLVEKIALRKKER------DAYVDALVKQVK 254
Query: 292 TDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEV 351
+ AD+ + +V GR K +S KK++ + +++ D+ +R+I+K +
Sbjct: 255 STIAAADI--EATVYGRAKHFFSIYKKMVNQDKTLDQIYDLFAIRIIVKDVKD------- 305
Query: 352 GERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRT 411
CY +I + +P R KDYIA PK N Y+SLH + + NG+ EIQIRT
Sbjct: 306 ----CYAALGVIHEHYTPVPGRFKDYIAMPKPNMYQSLHTTL-MGPNGQP---FEIQIRT 357
Query: 412 EEMDMLAVNGTASHAFYK-----GGLTNPEE 437
EEM G A+H YK GG++ EE
Sbjct: 358 EEMHRTCEYGIAAHWKYKEANNGGGISGEEE 388
>gi|28211806|ref|NP_782750.1| GTP pyrophosphokinase [Clostridium tetani E88]
gi|28204248|gb|AAO36687.1| putative GTP pyrophosphokinase [Clostridium tetani E88]
Length = 731
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 164/321 (51%), Gaps = 25/321 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LAD+ MDA+ I AGLL V+E + + V A L+ ++ +
Sbjct: 48 VEVACILADMGMDADTIVAGLLHDVIEDTEYTYEDVEREFNKQVADLVEGVTKLGK---I 104
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A +RK L D+R +++ LA RL MR L Y+P +Q + E I+
Sbjct: 105 KYKSKEEQQADNVRKMLLAMAQDVRVILIKLADRLHNMRTLKYMPVEKQKEKAKETFDIY 164
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELEDL+FRY+ P Y + I++ +L + L+
Sbjct: 165 APLAHRLGISKIKWELEDLAFRYINPNEYYSFVKEIAERRVERIAYIELIVNELTKSLEG 224
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+D ++GR K YS +K++ + +++ D+ +R+ LV+T
Sbjct: 225 SGIKSD------IEGRPKHFYSIYRKMINKNKTLDQIFDLTAIRI-------LVDTV--- 268
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY I+ +++K +P R KDYIA PK N Y+SLH V + GK EIQIRT
Sbjct: 269 -KDCYAALGIVHTMYKPIPGRFKDYIAMPKPNMYQSLHSTV-IGPQGKP---FEIQIRTF 323
Query: 413 EMDMLAVNGTASHAFYKGGLT 433
EM A G A+H YK G+T
Sbjct: 324 EMHKTAEYGIAAHWKYKEGIT 344
>gi|423558014|ref|ZP_17534316.1| GTP pyrophosphokinase [Bacillus cereus MC67]
gi|401191282|gb|EJQ98304.1| GTP pyrophosphokinase [Bacillus cereus MC67]
Length = 727
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 110/325 (33%), Positives = 163/325 (50%), Gaps = 33/325 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD +SAG L VVE ++++ + A L+ ++ +
Sbjct: 55 IQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP+ +Q I+ E ++I
Sbjct: 112 KYKSHEQQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED S RYL P Y + ++ + +D + + LK
Sbjct: 172 APLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVMTGIREKLK- 230
Query: 293 DATLADLVEDVSVQ----GRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+VS+Q GR K YS +K+ + E+ D+L +RV++ +
Sbjct: 231 ---------EVSIQPEISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKD---- 277
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+Q
Sbjct: 278 -------CYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTV-IGPKGD--PL-EVQ 326
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLT 433
IRT+EM +A G A+H YK G T
Sbjct: 327 IRTKEMHEIAEFGIAAHWAYKEGKT 351
>gi|403379224|ref|ZP_10921281.1| (p)ppGpp synthetase I SpoT/RelA [Paenibacillus sp. JC66]
Length = 725
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 167/325 (51%), Gaps = 29/325 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA ++ ++QMD + A LL VVE VS+ +++ G A L+ +++ +
Sbjct: 49 LAVADIVVNMQMDVTSVIAALLHDVVEDTTVSLDTLKEHFGETCAMLVDGLTKLEK---I 105
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + ++ RK F DIR +++ LA RL MR L Y Q I+ E ++I
Sbjct: 106 KFKSKQEQQNENYRKMFVAMAQDIRVILIKLADRLHNMRTLKYQSEESQRRIADETLEIF 165
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ--CL 290
P+AH + + + +E+ED++ RYL P Y + ++ T +EQ ++ +
Sbjct: 166 CPIAHRLGISAIKWEMEDIALRYLNPQKYYRIANLMQKKRTE--------REQYIKDVII 217
Query: 291 KTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSE 350
K ++++ + + GR K YS KK+ G+ E+ D+L +RVI+ N+
Sbjct: 218 KIKEKVSEMGIESDISGRPKHIYSIYKKMTARGKQFNEIYDLLAIRVIV---DNI----- 269
Query: 351 VGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIR 410
+ CY T II +LWK MP R KDYIA PK N Y+SLH V + G+ PL E+QIR
Sbjct: 270 ---KDCYATLGIIHTLWKPMPGRFKDYIAMPKTNMYQSLHTTV-IGPKGE--PL-EVQIR 322
Query: 411 TEEMDMLAVNGTASHAFYKGGLTNP 435
T EM + G A+H YK G P
Sbjct: 323 TWEMHRTSEYGIAAHWAYKEGSAVP 347
>gi|422339976|ref|ZP_16420932.1| GTP diphosphokinase [Fusobacterium nucleatum subsp. polymorphum
F0401]
gi|355370415|gb|EHG17798.1| GTP diphosphokinase [Fusobacterium nucleatum subsp. polymorphum
F0401]
Length = 725
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 169/320 (52%), Gaps = 33/320 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L D++MD + I AGLL VVE + I ++ G A L+
Sbjct: 51 VEVAKILMDMKMDTDTIVAGLLHDVVEDTLIPIADIKYNFGDTVATLVDGVT-------- 102
Query: 174 KLQVLDDET---AAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVM 229
KL+ L + T A +RK L +IR +++ LA RL MR L ++ +Q IS E +
Sbjct: 103 KLKALPNGTKNQAENIRKMILAMAENIRVILIKLADRLHNMRTLKFMKPEKQQSISKETL 162
Query: 230 KIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQC 289
I+APLAH + + ELED++F YL +L + + + + K I+ + +++
Sbjct: 163 DIYAPLAHRLGMAKIKSELEDMAFSYLHHDEFLEIKRLVDNTKEERKDYIENFIRTIIR- 221
Query: 290 LKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTS 349
TL+DL V+GR+K YS KK+ + G+ +++ D++G+RVI++ +
Sbjct: 222 -----TLSDLGIKAEVKGRFKHFYSIYKKMYQKGKEFDDIYDLMGVRVIVEDKA------ 270
Query: 350 EVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQI 409
CY I+ S + +P R KDYIA PK+N Y+S+H + V GK +EIQI
Sbjct: 271 -----TCYHVLGIVHSQYTPVPGRFKDYIAVPKSNNYQSIHTTI-VGPLGK---FIEIQI 321
Query: 410 RTEEMDMLAVNGTASHAFYK 429
RT++MD +A G A+H YK
Sbjct: 322 RTKDMDDIAEEGIAAHWNYK 341
>gi|254303921|ref|ZP_04971279.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [Fusobacterium
nucleatum subsp. polymorphum ATCC 10953]
gi|22087659|gb|AAM90994.1|AF525504_1 ppGpp [Fusobacterium nucleatum]
gi|148324113|gb|EDK89363.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [Fusobacterium
nucleatum subsp. polymorphum ATCC 10953]
Length = 725
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 169/320 (52%), Gaps = 33/320 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L D++MD + I AGLL VVE + I ++ G A L+
Sbjct: 51 VEVAKILMDMKMDTDTIVAGLLHDVVEDTLIPIADIKYNFGDTVATLVDGVT-------- 102
Query: 174 KLQVLDDET---AAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVM 229
KL+ L + T A +RK L +IR +++ LA RL MR L ++ +Q IS E +
Sbjct: 103 KLKALPNGTKNQAENIRKMILAMAENIRVILIKLADRLHNMRTLKFMKPEKQQSISKETL 162
Query: 230 KIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQC 289
I+APLAH + + ELED++F YL +L + + + + K I+ + +++
Sbjct: 163 DIYAPLAHRLGMAKIKSELEDIAFSYLHHDEFLEIKRLVDNTKEERKDYIENFIRTIIR- 221
Query: 290 LKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTS 349
TL+DL V+GR+K YS KK+ + G+ +++ D++G+RVI++ +
Sbjct: 222 -----TLSDLGIKAEVKGRFKHFYSIYKKMYQKGKEFDDIYDLMGVRVIVEDKA------ 270
Query: 350 EVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQI 409
CY I+ S + +P R KDYIA PK+N Y+S+H + V GK +EIQI
Sbjct: 271 -----TCYHVLGIVHSQYTPVPGRFKDYIAVPKSNNYQSIHTTI-VGPLGK---FIEIQI 321
Query: 410 RTEEMDMLAVNGTASHAFYK 429
RT++MD +A G A+H YK
Sbjct: 322 RTKDMDDIAEEGIAAHWNYK 341
>gi|298160671|gb|EFI01692.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 701
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 162/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + + + G A L+ V
Sbjct: 46 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALSAQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ ++P ++ ++ K L++ +E L
Sbjct: 163 LEIYAPIANRLGMHSVRIEFEDLGFKAMYPMRSSRINQAVKRARGNRKELVNKIEESLSH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D D V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAVDGIEGD------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|422639739|ref|ZP_16703167.1| RelA/SpoT protein [Pseudomonas syringae Cit 7]
gi|440743061|ref|ZP_20922380.1| RelA/SpoT protein [Pseudomonas syringae BRIP39023]
gi|330952131|gb|EGH52391.1| RelA/SpoT protein [Pseudomonas syringae Cit 7]
gi|440376432|gb|ELQ13105.1| RelA/SpoT protein [Pseudomonas syringae BRIP39023]
Length = 701
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 162/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + + + G A L+ V
Sbjct: 46 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALSAQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ ++P ++ ++ K L++ +E L
Sbjct: 163 LEIYAPIANRLGMHSVRIEFEDLGFKAMYPMRSSRINQAVKRARGNRKELVNKIEESLSH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D D V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAVDGIEGD------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|311031524|ref|ZP_07709614.1| GTP pyrophosphokinase [Bacillus sp. m3-13]
Length = 732
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/317 (33%), Positives = 161/317 (50%), Gaps = 25/317 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL +D I+AG L VVE V+++++++ A L+ ++ +
Sbjct: 55 IQVAGILVDLDLDPSTIAAGFLHDVVEDTSVTLEEIKEAFNAEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP+ +Q IS E ++I
Sbjct: 112 KYKSQEEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ + I ++ L+
Sbjct: 172 APLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKRKRAEREEYISEVMNEVNDRLEE 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
A+L GR K YS +K+ K + E+ D+L +R+I+ +
Sbjct: 232 VEITAEL------SGRPKHIYSIYRKMAKQNKQFSEIYDLLAVRIIVNSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PK N Y+SLH V + G PL E+QIRT
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGD--PL-EVQIRTS 330
Query: 413 EMDMLAVNGTASHAFYK 429
+M +A G A+H YK
Sbjct: 331 DMHQIAEYGIAAHWAYK 347
>gi|94544772|gb|ABF34820.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Streptococcus pyogenes
MGAS10270]
Length = 743
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 115/380 (30%), Positives = 187/380 (49%), Gaps = 45/380 (11%)
Query: 69 NELTERMNVLSS----------SSSRLLFKALKLSIPMLQSLPLSPDSRSP-LTKALSVA 117
NE+ + MNV + + + F A LS S P + + VA
Sbjct: 3 NEMAKIMNVTGEEVIALAATYMTKADVAFVAKALSYATAAHFYQVRKSGEPYIVHPIQVA 62
Query: 118 LLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVN----L 173
+LADL +DA ++ G L VVE +++ ++ G H++ + + V +
Sbjct: 63 GILADLHLDAVTVACGFLHDVVEDTDITLDEIEADFG-------HDARDIVDGVTKLGKV 115
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E M+I+
Sbjct: 116 EYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIY 175
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELEDL+FRYL + + ++ + L+ E ++ +KT
Sbjct: 176 APLAHRLGISRIKWELEDLAFRYLNETEFYKISHMMKEKRREREALV----EAIVSKVKT 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
T L D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 232 YTTQQGLFGD--VYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCVMETQSDV------- 282
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQIRT+
Sbjct: 283 ----YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQIRTK 333
Query: 413 EMDMLAVNGTASHAFYKGGL 432
+M +A G A+H YK G+
Sbjct: 334 DMHQVAEYGVAAHWAYKKGV 353
>gi|395244306|ref|ZP_10421275.1| GTP diphosphokinase [Lactobacillus hominis CRBIP 24.179]
gi|394483401|emb|CCI82283.1| GTP diphosphokinase [Lactobacillus hominis CRBIP 24.179]
Length = 748
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 127/403 (31%), Positives = 197/403 (48%), Gaps = 36/403 (8%)
Query: 116 VALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKL 175
VA LA L++D + ++AG L VE V+ + ++++ G A ++ ++ + + K
Sbjct: 57 VAGTLATLKLDPDTVAAGYLHDTVEDTPVTNEDIKEKFGKDVAFIVDGVTKL-SKIQYKS 115
Query: 176 QVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAP 234
+ ++ A RK + D+R +++ LA RL M LD+L +Q I+ E + I+AP
Sbjct: 116 KTHEEYLADNHRKMLIAMAKDLRVIMVKLADRLHNMHTLDHLRPDKQRRIADETLDIYAP 175
Query: 235 LAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDA 294
LA + + +ELED+S YL P Y + ++S + + I +Q L+
Sbjct: 176 LADRLGIGTIKWELEDMSLHYLNPEQYYRIVNLMQSKRSEREGYI----ADAIQILRQ-- 229
Query: 295 TLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGER 354
TL L D + GR K YS KK++ + E+ D+L +RVI+K R
Sbjct: 230 TLDSLHIDYEIYGRPKHIYSIYKKMVNKHKDFSEIYDLLAVRVIVKSV-----------R 278
Query: 355 ACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEM 414
CY + + WK MP R KDYIA PK+NGY+SLH + + GK PL EIQIRTE M
Sbjct: 279 DCYAVLGAVHTKWKPMPGRFKDYIAVPKSNGYQSLHTTI-IGPGGK--PL-EIQIRTEAM 334
Query: 415 DMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNH---KGFEFD- 470
+A G A+H YK G+ E + E+ L L+D +H K + D
Sbjct: 335 HQVAEYGVAAHWAYKEGVKGEVEQTEANKKLNMFQEI--LELQDETKDSHEFMKSVKTDI 392
Query: 471 WRDRVFRLLDKNGD------GRISIEELMEVMEELGAPGEDAR 507
+ DRV+ K GD G + ++ + E+GA AR
Sbjct: 393 FSDRVYVFTPK-GDVYELPKGSVPLDFAYMIHSEVGAHSVGAR 434
>gi|408791615|ref|ZP_11203225.1| putative GTP diphosphokinase [Leptospira meyeri serovar Hardjo str.
Went 5]
gi|408463025|gb|EKJ86750.1| putative GTP diphosphokinase [Leptospira meyeri serovar Hardjo str.
Went 5]
Length = 684
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/317 (33%), Positives = 167/317 (52%), Gaps = 25/317 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
++VA +L +L +D I+AGLL VVE S + + G A L+ ++ +
Sbjct: 56 MNVASVLDELGLDERAIAAGLLHDVVEDTSYSKEDMAREFGEDIAALVEGVTKISE---I 112
Query: 174 KLQVLDDETAAALRKFCL-TYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K Q + E A +RK L T D+R +++ LA + +R L + P +Q I+ EV+ ++
Sbjct: 113 KSQSKETEAAENIRKMLLATIKDVRVMLIKLADKTHNVRTLKFQPEEKQKRIAKEVLSLY 172
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+A + + FELEDL+F+ L P Y + + + K D Y E++ LK
Sbjct: 173 APIAGRLGVYKVKFELEDLAFQSLHPEEYQEI----KKRVSAKKSERDEYIEKIKIILK- 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
LA++ D + GR K YS +K++ + E+ D+ +R+I T+E+
Sbjct: 228 -QRLAEISIDARIDGRAKHFYSIYRKMVTKEKSFSEIFDLRAVRII---------TNEI- 276
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY I+ +LW +P R KDYIA PK N Y+SLH V D RP ME+QIRT+
Sbjct: 277 -KDCYGVLGIVHTLWTPIPGRFKDYIATPKTNLYQSLHTTVFGPDG---RP-MEVQIRTK 331
Query: 413 EMDMLAVNGTASHAFYK 429
+M+ +A NG A+H YK
Sbjct: 332 DMNAIAENGVAAHWAYK 348
>gi|302189237|ref|ZP_07265910.1| RelA/SpoT protein [Pseudomonas syringae pv. syringae 642]
gi|422674483|ref|ZP_16733836.1| RelA/SpoT protein [Pseudomonas syringae pv. aceris str. M302273]
gi|424065419|ref|ZP_17802894.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pseudomonas syringae pv. avellanae str. ISPaVe013]
gi|330972210|gb|EGH72276.1| RelA/SpoT protein [Pseudomonas syringae pv. aceris str. M302273]
gi|408003392|gb|EKG43580.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pseudomonas syringae pv. avellanae str. ISPaVe013]
Length = 701
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 162/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + + + G A L+ V
Sbjct: 46 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALSAQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ ++P ++ ++ K L++ +E L
Sbjct: 163 LEIYAPIANRLGMHSVRIEFEDLGFKAMYPMRSSRINQAVKRARGNRKELVNKIEESLSH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D D V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAVDGIEGD------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|289672865|ref|ZP_06493755.1| RelA/SpoT protein [Pseudomonas syringae pv. syringae FF5]
gi|422616178|ref|ZP_16684884.1| RelA/SpoT protein [Pseudomonas syringae pv. japonica str. M301072]
gi|422666822|ref|ZP_16726689.1| RelA/SpoT protein [Pseudomonas syringae pv. aptata str. DSM 50252]
gi|440723137|ref|ZP_20903504.1| RelA/SpoT protein [Pseudomonas syringae BRIP34876]
gi|440728399|ref|ZP_20908615.1| RelA/SpoT protein [Pseudomonas syringae BRIP34881]
gi|443640948|ref|ZP_21124798.1| (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase, RelA/SpoT family [Pseudomonas
syringae pv. syringae B64]
gi|330895691|gb|EGH27983.1| RelA/SpoT protein [Pseudomonas syringae pv. japonica str. M301072]
gi|330977350|gb|EGH77301.1| RelA/SpoT protein [Pseudomonas syringae pv. aptata str. DSM 50252]
gi|440360217|gb|ELP97501.1| RelA/SpoT protein [Pseudomonas syringae BRIP34876]
gi|440361892|gb|ELP99108.1| RelA/SpoT protein [Pseudomonas syringae BRIP34881]
gi|443280965|gb|ELS39970.1| (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase, RelA/SpoT family [Pseudomonas
syringae pv. syringae B64]
Length = 701
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 162/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + + + G A L+ V
Sbjct: 46 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALSAQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ ++P ++ ++ K L++ +E L
Sbjct: 163 LEIYAPIANRLGMHSVRIEFEDLGFKAMYPMRSSRINQAVKRARGNRKELVNKIEESLSH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D D V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAVDGIEGD------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|228923159|ref|ZP_04086450.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|423582615|ref|ZP_17558726.1| GTP pyrophosphokinase [Bacillus cereus VD014]
gi|423634768|ref|ZP_17610421.1| GTP pyrophosphokinase [Bacillus cereus VD156]
gi|228836538|gb|EEM81888.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|401213494|gb|EJR20235.1| GTP pyrophosphokinase [Bacillus cereus VD014]
gi|401278754|gb|EJR84684.1| GTP pyrophosphokinase [Bacillus cereus VD156]
Length = 727
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 163/321 (50%), Gaps = 25/321 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD +SAG L VVE ++++ + A L+ ++ +
Sbjct: 55 IQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP+ +Q I+ E ++I
Sbjct: 112 KYKSHEQQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED S RYL P Y + ++ + Y E+++ ++
Sbjct: 172 APLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREE----YLEEVMTGIR- 226
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
L ++ + GR K YS +K+ + E+ D+L +RV++ +
Sbjct: 227 -EKLDEVAIQPEISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+QIRT+
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTV-IGPKGD--PL-EVQIRTK 330
Query: 413 EMDMLAVNGTASHAFYKGGLT 433
EM +A G A+H YK G T
Sbjct: 331 EMHEIAEFGIAAHWAYKEGKT 351
>gi|414564881|ref|YP_006043842.1| GTP pyrophosphokinase RelA [Streptococcus equi subsp. zooepidemicus
ATCC 35246]
gi|338847946|gb|AEJ26158.1| GTP pyrophosphokinase RelA [Streptococcus equi subsp. zooepidemicus
ATCC 35246]
Length = 739
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 183/368 (49%), Gaps = 28/368 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +LADL +DA ++ G L VVE ++++ + G ++ ++
Sbjct: 51 IVHPIQVAAILADLHLDAVTVACGFLHDVVEDTDITLEDIEFDFGKDVRDIVDGVTKLGK 110
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E
Sbjct: 111 ---VEYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRET 167
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLAH + + + +ELEDL+FRYL + + +R + L+D ++
Sbjct: 168 MEIYAPLAHRLGISRIKWELEDLAFRYLNEIEFYKISHMMREKRREREALVD----DIVT 223
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+K T L DV GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 224 KIKAYTTEQGLYGDVY--GRPKHIYSVYRKMRDKKKRFDQIFDLIAIRCVMETQSDV--- 278
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
Y I LW+ MP R KDYIA PK NGY+S+H V G P+ EIQ
Sbjct: 279 --------YAMVGYIHELWRPMPGRFKDYIAAPKTNGYQSIHTTV----YGPKGPI-EIQ 325
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFE 468
IRT+EM +A G A+H YK G+ K M EL + L+ + + KGF
Sbjct: 326 IRTKEMHQVAEYGVAAHWAYKKGIRGKVNQAEQKVGMNWIKEL--VELQAASNGDAKGFV 383
Query: 469 FDWRDRVF 476
++ +F
Sbjct: 384 DSVKEDIF 391
>gi|227484948|ref|ZP_03915264.1| GTP diphosphokinase [Anaerococcus lactolyticus ATCC 51172]
gi|227237103|gb|EEI87118.1| GTP diphosphokinase [Anaerococcus lactolyticus ATCC 51172]
Length = 726
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 167/321 (52%), Gaps = 33/321 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
++VA L+D+++D E I AGL+ V+E V+ +++ G L+ ++KN +
Sbjct: 55 IAVASNLSDMKLDDETICAGLMHDVLEDTDVTRDEMKAEFGEEITFLVDGVTKLKN---I 111
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+++ A +RK + D+R +++ LA RL MR L+Y+ R +QL + E ++I+
Sbjct: 112 NYTSKEEKQAENIRKMVMAMANDVRVVLIKLADRLHNMRTLEYMTREKQLQKANETIEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYL----FVDTWLRSHETGSKPLIDIYKEQLLQ 288
PLAH + L +ELEDL FRY P Y V+ R E +ID + L
Sbjct: 172 VPLAHRLGIYSLKWELEDLCFRYQEPEKYYELAEMVNVKRRERENYINEIIDTLTKAL-- 229
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
D+T + + GR KS YS KK+ ++ EE+ D+ +RV LV+T
Sbjct: 230 ----DSTNINF----EISGRPKSLYSINKKMERNKIAFEEIYDLTAIRV-------LVDT 274
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
+ E CY + SLW+ +P+R KDYI +PK NGYRSLH V D ++P E+Q
Sbjct: 275 --IAE--CYAVLGKVHSLWRPIPNRIKDYIGQPKPNGYRSLHTTVFGDD---SKPF-EVQ 326
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT +M G A+H YK
Sbjct: 327 IRTRKMHRECEFGVAAHWRYK 347
>gi|195978873|ref|YP_002124117.1| GTP pyrophosphokinase [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|195975578|gb|ACG63104.1| GTP pyrophosphokinase RelA [Streptococcus equi subsp. zooepidemicus
MGCS10565]
Length = 739
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 183/368 (49%), Gaps = 28/368 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +LADL +DA ++ G L VVE ++++ + G ++ ++
Sbjct: 51 IVHPIQVAAILADLHLDAVTVACGFLHDVVEDTDITLEDIEFDFGKDVRDIVDGVTKLGK 110
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E
Sbjct: 111 ---VEYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRET 167
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLAH + + + +ELEDL+FRYL + + +R + L+D ++
Sbjct: 168 MEIYAPLAHRLGISRIKWELEDLAFRYLNEIEFYKISHMMREKRREREALVD----DIVT 223
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+K T L DV GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 224 KIKAYTTEQGLYGDVY--GRPKHIYSVYRKMRDKKKRFDQIFDLIAIRCVMETQSDV--- 278
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
Y I LW+ MP R KDYIA PK NGY+S+H V G P+ EIQ
Sbjct: 279 --------YAMVGYIHELWRPMPGRFKDYIAAPKTNGYQSIHTTV----YGPKGPI-EIQ 325
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFE 468
IRT+EM +A G A+H YK G+ K M EL + L+ + + KGF
Sbjct: 326 IRTKEMHQVAEYGVAAHWAYKKGIRGKVNQAEQKVGMNWIKEL--VELQAASNGDAKGFV 383
Query: 469 FDWRDRVF 476
++ +F
Sbjct: 384 DSVKEDIF 391
>gi|19704814|ref|NP_604376.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|296327789|ref|ZP_06870328.1| GTP diphosphokinase [Fusobacterium nucleatum subsp. nucleatum ATCC
23726]
gi|19715157|gb|AAL95675.1| Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|296155136|gb|EFG95914.1| GTP diphosphokinase [Fusobacterium nucleatum subsp. nucleatum ATCC
23726]
Length = 725
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/317 (33%), Positives = 167/317 (52%), Gaps = 27/317 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L D++MD + I AGLL VVE + I ++ G A L+ ++K
Sbjct: 51 VEVAKILMDMKMDTDTIVAGLLHDVVEDTLIPIADIKYNFGDTVATLVDGVTKLKT---- 106
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
L A +RK L +IR +++ LA RL MR L ++ +Q IS E + I+
Sbjct: 107 -LPNGTKNQAENIRKMILAMAENIRVILIKLADRLHNMRTLKFMKPEKQQSISKETLDIY 165
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + ELED++F YL +L + + + + K I+ + +++
Sbjct: 166 APLAHRLGMAKIKSELEDIAFSYLHHDEFLEIKRLVDNTKEERKDYIENFIRTIIR---- 221
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
TL+DL V+GR+K YS KK+ + G+ +++ D++G+RVI++ +
Sbjct: 222 --TLSDLDIKAEVKGRFKHFYSIYKKMYQKGKEFDDIYDLMGVRVIVEDKA--------- 270
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I+ S + +P R KDYIA PK+N Y+S+H + V GK +EIQIRT+
Sbjct: 271 --TCYHVLGIVHSQYTPVPGRFKDYIAVPKSNNYQSIHTTI-VGPLGK---FIEIQIRTK 324
Query: 413 EMDMLAVNGTASHAFYK 429
+MD +A G A+H YK
Sbjct: 325 DMDDIAEEGIAAHWNYK 341
>gi|71736803|ref|YP_272502.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pseudomonas syringae pv. phaseolicola 1448A]
gi|257481752|ref|ZP_05635793.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|289625450|ref|ZP_06458404.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Pseudomonas
syringae pv. aesculi str. NCPPB 3681]
gi|416019431|ref|ZP_11566324.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Pseudomonas
syringae pv. glycinea str. B076]
gi|416022293|ref|ZP_11567533.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Pseudomonas
syringae pv. glycinea str. race 4]
gi|422403213|ref|ZP_16480272.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Pseudomonas
syringae pv. glycinea str. race 4]
gi|422581675|ref|ZP_16656816.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|422596575|ref|ZP_16670856.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Pseudomonas
syringae pv. lachrymans str. M301315]
gi|422680040|ref|ZP_16738312.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|71557356|gb|AAZ36567.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|320322259|gb|EFW78355.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Pseudomonas
syringae pv. glycinea str. B076]
gi|320331908|gb|EFW87846.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330866523|gb|EGH01232.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|330873184|gb|EGH07333.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330986873|gb|EGH84976.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Pseudomonas
syringae pv. lachrymans str. M301315]
gi|331009386|gb|EGH89442.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
Length = 701
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 162/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + + + G A L+ V
Sbjct: 46 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALSAQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ ++P ++ ++ K L++ +E L
Sbjct: 163 LEIYAPIANRLGMHSVRIEFEDLGFKAMYPMRSSRINQAVKRARGNRKELVNKIEESLSH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D D V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAVDGIEGD------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|42783537|ref|NP_980784.1| GTP pyrophosphokinase [Bacillus cereus ATCC 10987]
gi|384182226|ref|YP_005567988.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|402555460|ref|YP_006596731.1| GTP pyrophosphokinase [Bacillus cereus FRI-35]
gi|42739466|gb|AAS43392.1| GTP pyrophosphokinase [Bacillus cereus ATCC 10987]
gi|324328310|gb|ADY23570.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|401796670|gb|AFQ10529.1| GTP pyrophosphokinase [Bacillus cereus FRI-35]
Length = 727
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 163/321 (50%), Gaps = 25/321 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD +SAG L VVE ++++ + A L+ ++ +
Sbjct: 55 IQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP+ +Q I+ E ++I
Sbjct: 112 KYKSHEQQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED S RYL P Y + ++ + Y E+++ ++
Sbjct: 172 APLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREE----YLEEVMTGIR- 226
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
L ++ + GR K YS +K+ + E+ D+L +RV++ +
Sbjct: 227 -EKLDEVAIQPEISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+QIRT+
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTV-IGPKGD--PL-EVQIRTK 330
Query: 413 EMDMLAVNGTASHAFYKGGLT 433
EM +A G A+H YK G T
Sbjct: 331 EMHEIAEFGIAAHWAYKEGKT 351
>gi|357384160|ref|YP_004898884.1| GTP pyrophosphokinase, (p)ppGpp synthetase II /
guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pelagibacterium halotolerans B2]
gi|351592797|gb|AEQ51134.1| GTP pyrophosphokinase, (p)ppGpp synthetase II /
guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pelagibacterium halotolerans B2]
Length = 763
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/322 (32%), Positives = 166/322 (51%), Gaps = 25/322 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L VA +L DL++D I+ LL +E + ++ + G ++ +++ L
Sbjct: 50 LEVAAILTDLKLDDATIAVALLHDTIEDTDATRAEIDEMFGTEIGQIVDGLTKIER---L 106
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
L ++ A LRK L D+R L++ LA RL MR L+++P +++ I+ E M I+
Sbjct: 107 NLVSREEAQAENLRKLLLAISQDVRVLLVKLADRLHNMRTLEFMPMHKRGRIAQETMDIY 166
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + ELEDL+F+ L+P Y + + L E S+ +I + +L + L
Sbjct: 167 APLAGRMGMQDMRNELEDLAFKSLYPEHYNAITSRLSQMEISSREIIAEIRSELEEHLAG 226
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
A V R KS +S K+ + E+++D++G RVI V+T +
Sbjct: 227 QGIKA------KVSWRLKSAWSIYSKIERKAIALEQLSDMIGFRVI-------VDTID-- 271
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
ACY T +I + WK +P R KDYI+ PKAN YRS+H + G R +E+QIRT+
Sbjct: 272 --ACYRTLGVIHTSWKVVPGRFKDYISVPKANDYRSIHTTI----VGPGRQRVELQIRTQ 325
Query: 413 EMDMLAVNGTASHAFYKGGLTN 434
EM +A G A+H YK ++
Sbjct: 326 EMHAIAEFGIAAHQLYKEAISG 347
>gi|347525617|ref|YP_004832365.1| GTP pyrophosphokinase [Lactobacillus ruminis ATCC 27782]
gi|345284576|gb|AEN78429.1| GTP pyrophosphokinase [Lactobacillus ruminis ATCC 27782]
Length = 739
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 115/327 (35%), Positives = 167/327 (51%), Gaps = 35/327 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL+MD E +SAG L VVE V++ V + G ++ ++ +
Sbjct: 55 IQVAGILADLKMDPETVSAGFLHDVVEDTPVTLGDVGELFGKDVEVIVDGVTKLSK---I 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + ++ A RK L D+R +I+ LA RL MR L +L +Q I+ E ++I+
Sbjct: 112 RYKSHQEQLAENHRKLLLAMSKDLRVIIVKLADRLHNMRTLGHLRPDKQRRIANETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + + +ELED+S RYL P Y + H SK +E+ +Q +
Sbjct: 172 APLADRLGISTIKWELEDISLRYLNPQQYYRI-----VHLMNSK------REERVQYIDE 220
Query: 293 DAT-----LADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVN 347
T +ADL D + GR K YS K+ + ++ D+L +RV++K +
Sbjct: 221 AITEIKEAIADLHLDCEIYGRPKHIYSIYHKMRDLHKQFSQIYDLLAVRVVVKSIKD--- 277
Query: 348 TSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEI 407
CY I + WK MP R KDYIA PKAN Y+SLH V K +PL E+
Sbjct: 278 --------CYAVLGAIHTKWKPMPGRFKDYIAMPKANMYQSLHTTV---IGPKDKPL-EV 325
Query: 408 QIRTEEMDMLAVNGTASHAFYKGGLTN 434
QIRTEEM +A G A+H YK G TN
Sbjct: 326 QIRTEEMHRVAEYGIAAHWAYKEGKTN 352
>gi|206890423|ref|YP_002248838.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206742361|gb|ACI21418.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 702
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 169/318 (53%), Gaps = 27/318 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA +LAD+++D+ I+AGLL VE ++I + + A L+ ++ L
Sbjct: 50 LAVAAILADMKLDSTTIAAGLLHDTVEDAEMTIDDIGEIFTPDVAFLVDAVTKLSK---L 106
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ +++ A + RK F DIR +++ A RL MR +++LP +Q I+ E ++I+
Sbjct: 107 QFSTVEEAQAESFRKMFLAMSKDIRVILIKFADRLHNMRTIEFLPPDKQKRIAKETLEIY 166
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA+ + ++ E EDLSF+ L+P Y + + + + ID ++ L
Sbjct: 167 APLANRLGIGWMRSEFEDLSFKVLYPDEYDDLVKKVAKRKEDQQAYID----NVINILSE 222
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIP-EEVNDVLGLRVIIKPSSNLVNTSEV 351
+ ++ + GR K Y +KL+K +IP E+V DV+G+R+I +
Sbjct: 223 KISAMNI--PFKIYGRVKHYYGIYQKLIKQ-KIPFEQVYDVIGIRIITDTVPH------- 272
Query: 352 GERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRT 411
CY II SLW +P R KD+I+ PK+N Y+SLH V + G+ +E QIRT
Sbjct: 273 ----CYDILGIIHSLWTLIPGRFKDFISLPKSNYYQSLHTTV-IGPGGER---VEFQIRT 324
Query: 412 EEMDMLAVNGTASHAFYK 429
EEMD++A G A+H YK
Sbjct: 325 EEMDIIAEEGIAAHWRYK 342
>gi|111221581|ref|YP_712375.1| GTP pyrophosphokinase [Frankia alni ACN14a]
gi|111149113|emb|CAJ60796.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Frankia alni
ACN14a]
Length = 737
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 169/321 (52%), Gaps = 27/321 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++VA +LADL MD +SA LL +E +S + +R+ G A L+ +++ N
Sbjct: 40 ITHPIAVASILADLGMDTPTLSAALLHDTLEETSLSAEAIRETFGDQIA-LIVDAVSKLN 98
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
V +V + A +R+ + D RAL++ LA RL MR L +LP ++Q + E
Sbjct: 99 RV----KVGEAAQAETIRRMVVAMARDPRALVVKLADRLHNMRTLRFLPEHKQERKARET 154
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++++APLAH + N L +ELEDL+F L+P Y D +R P D+Y +++
Sbjct: 155 LEVYAPLAHRLGMNSLKWELEDLAFAALYPKRY---DEIVRL-VADRAPSRDVYLAEVIG 210
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ A L D V GR K YS +K++ GR +++ D++G+RV++
Sbjct: 211 --QVQAGLRDARIRAVVSGRPKHYYSIYQKMVVRGRSFDDIYDLVGIRVLVDSV------ 262
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY T + + WK +P R KDYIA PK N Y+SLH V + GK +E+Q
Sbjct: 263 -----RDCYATLGTVHANWKPIPGRFKDYIAMPKFNMYQSLHTTV-IGPEGKP---VELQ 313
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT M A G A+H YK
Sbjct: 314 IRTHAMHNRAEYGIAAHWKYK 334
>gi|386714927|ref|YP_006181250.1| GTP pyrophosphokinase [Halobacillus halophilus DSM 2266]
gi|384074483|emb|CCG45976.1| GTP pyrophosphokinase [Halobacillus halophilus DSM 2266]
Length = 734
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 163/319 (51%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L +L+MD E I+ G L VVE VSI+++ + L+ ++ +
Sbjct: 55 IQVAGILVNLEMDPETIAGGFLHDVVEDTEVSIEEIEKAFNTEVSMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP +Q IS E ++I
Sbjct: 112 KYKSKEAQQAENHRKMFVAMAKDIRVILIKLADRLHNMRTLKHLPAEKQRRISNETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ + Y E+++ +++
Sbjct: 172 APLAHRLGISTIKWELEDTALRYLNPQQYYRIVHLMKQKRNEREH----YIEEVIDEIRS 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
L D+ D + GR K YS +K++ + E+ D+L +R+ + +
Sbjct: 228 Q--LKDVNIDADLNGRPKHLYSIYRKMVLQNKQFNEIYDLLAVRITVNSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PK N Y+SLH V + G PL E+QIRT
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKPNLYQSLHTTV-IGPKGD--PL-EVQIRTH 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A G A+H YK G
Sbjct: 331 DMHEIAEYGIAAHWAYKEG 349
>gi|422223949|ref|ZP_16383778.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pseudomonas avellanae BPIC 631]
gi|422589670|ref|ZP_16664331.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Pseudomonas
syringae pv. morsprunorum str. M302280]
gi|422651167|ref|ZP_16713965.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Pseudomonas
syringae pv. actinidiae str. M302091]
gi|330876510|gb|EGH10659.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Pseudomonas
syringae pv. morsprunorum str. M302280]
gi|330964248|gb|EGH64508.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Pseudomonas
syringae pv. actinidiae str. M302091]
gi|407992816|gb|EKG34366.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pseudomonas avellanae BPIC 631]
Length = 701
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 162/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + + + G A L+ V
Sbjct: 46 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALSAQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ ++P ++ ++ K L++ +E L
Sbjct: 163 LEIYAPIANRLGMHSVRIEFEDLGFKAMYPMRSSRINQAVKRARGNRKELVNKIEESLSH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D D V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAVDGIEGD------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|281418020|ref|ZP_06249040.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium thermocellum JW20]
gi|281409422|gb|EFB39680.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium thermocellum JW20]
Length = 724
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 103/323 (31%), Positives = 164/323 (50%), Gaps = 33/323 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL++D I AG+L +VE +I+Q+R+ G A+L+ ++ +
Sbjct: 51 MEVANILADLELDCTAIVAGILHDIVEDTSYTIEQIRENFGDEVANLVDGVTKLGK---I 107
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
++ A LRK F DIR +++ LA RL MR L Y+P +Q+ + E ++I+
Sbjct: 108 PYTTKEELQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMPTEKQIEKAKETLEIY 167
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWL----RSHETGSKPLIDIYKEQLLQ 288
APLAH + + + +ELEDL RYL P Y + + R E +I +E+ ++
Sbjct: 168 APLAHRLGISKIKWELEDLCLRYLDPKGYYDLVNKIAKKRREREAYISEIIKTIQEKTVE 227
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ D ++GR K YS +K+++ + E++ D+ +RVI+ +
Sbjct: 228 ----------IGIDAHIEGRPKHFYSIYRKMVQQNKTIEQIYDLFAVRVIVTTVKD---- 273
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY ++ ++K MP R KDYIA PK N Y+SLH + G E+Q
Sbjct: 274 -------CYAVLGLVHEIFKPMPGRFKDYIAMPKPNMYQSLHTTLI----GHEGVPFEVQ 322
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IRT EM +A G A+H YK G
Sbjct: 323 IRTWEMHRVAEVGIAAHWKYKEG 345
>gi|340397999|ref|YP_004727024.1| putative GTP pyrophosphokinase [Streptococcus salivarius CCHSS3]
gi|387783264|ref|YP_006069347.1| putative GTP pyrophosphokinase (ATP:GTP 3-pyrophosphotransferase)
(ppGpp synthetase I) ((p)ppGpp synthetase) (Stringent
response-like protein) [Streptococcus salivarius
JIM8777]
gi|338741992|emb|CCB92497.1| putative GTP pyrophosphokinase (ATP:GTP 3-pyrophosphotransferase)
(ppGpp synthetase I) ((p)ppGpp synthetase) (Stringent
response-like protein) [Streptococcus salivarius CCHSS3]
gi|338744146|emb|CCB94512.1| putative GTP pyrophosphokinase (ATP:GTP 3-pyrophosphotransferase)
(ppGpp synthetase I) ((p)ppGpp synthetase) (Stringent
response-like protein) [Streptococcus salivarius
JIM8777]
Length = 739
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 186/364 (51%), Gaps = 28/364 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL +DA ++ G L VVE ++ + G +++ ++ +
Sbjct: 55 IQVAGILADLHLDAVTVACGFLHDVVEDTEKTLDDLEADFGTDVRNIVDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E M+I+
Sbjct: 112 EYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED+SFRYL + + ++ + L+D +++ +KT
Sbjct: 172 APLAHRLGISRIKWELEDMSFRYLNEVEFYKISHMMKEKRREREELVD----EIVDKIKT 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
LV D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 228 YTAEQGLVGD--VYGRPKHIYSIYRKMRDKKKRFDQIYDLIAIRCVMETHSDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PK+NGY+S+H V G P+ EIQIRT+
Sbjct: 279 ----YAMLGYIHELWRPMPGRFKDYIANPKSNGYQSIHTTV----YGPKGPI-EIQIRTK 329
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFEFDWR 472
EM +A G A+H YK G+ ++K M +L + L+D + + GF +
Sbjct: 330 EMHQVAEYGVAAHWAYKKGIKGKVDSKESALGMNWIKDL--VELQDASNGDAMGFVDSVK 387
Query: 473 DRVF 476
+ +F
Sbjct: 388 EDIF 391
>gi|66043479|ref|YP_233320.1| RelA/SpoT protein [Pseudomonas syringae pv. syringae B728a]
gi|63254186|gb|AAY35282.1| RelA/SpoT protein [Pseudomonas syringae pv. syringae B728a]
Length = 707
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 162/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + + + G A L+ V
Sbjct: 52 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALSAQFGETVAELVDG---VSK 108
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 109 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 168
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ ++P ++ ++ K L++ +E L
Sbjct: 169 LEIYAPIANRLGMHSVRIEFEDLGFKAMYPMRSSRINQAVKRARGNRKELVNKIEESLSH 228
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D D V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 229 CLAVDGIEGD------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 278
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 279 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 327
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 328 IRTREMEEMANNGIAAHWLYK 348
>gi|387762136|ref|YP_006069113.1| GTP pyrophosphokinase [Streptococcus salivarius 57.I]
gi|339292903|gb|AEJ54250.1| GTP pyrophosphokinase [Streptococcus salivarius 57.I]
Length = 739
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 186/364 (51%), Gaps = 28/364 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL +DA ++ G L VVE ++ + G +++ ++ +
Sbjct: 55 IQVAGILADLHLDAVTVACGFLHDVVEDTEKTLDDLEADFGTDVRNIVDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E M+I+
Sbjct: 112 EYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED+SFRYL + + ++ + L+D +++ +KT
Sbjct: 172 APLAHRLGISRIKWELEDMSFRYLNEVEFYKISHMMKEKRREREELVD----EIVDKIKT 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
LV D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 228 YTAEQGLVGD--VYGRPKHIYSIYRKMRDKKKRFDQIYDLIAIRCVMETHSDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PK+NGY+S+H V G P+ EIQIRT+
Sbjct: 279 ----YAMLGYIHELWRPMPGRFKDYIANPKSNGYQSIHTTV----YGPKGPI-EIQIRTK 329
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFEFDWR 472
EM +A G A+H YK G+ ++K M +L + L+D + + GF +
Sbjct: 330 EMHQVAEYGVAAHWAYKKGIKGKVDSKESALGMNWIKDL--VELQDASNGDAMGFVDSVK 387
Query: 473 DRVF 476
+ +F
Sbjct: 388 EDIF 391
>gi|312143973|ref|YP_003995419.1| (p)ppGpp synthetase I SpoT/RelA [Halanaerobium hydrogeniformans]
gi|311904624|gb|ADQ15065.1| (p)ppGpp synthetase I, SpoT/RelA [Halanaerobium hydrogeniformans]
Length = 715
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/325 (33%), Positives = 174/325 (53%), Gaps = 25/325 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L VA++LADL++D I A ++ VVE ++ + +R G AH++ ++ +
Sbjct: 49 LGVAMILADLELDIISIVASMMHDVVEDTEITSEDIRKEFGDEVAHIVEGVTKL---TRM 105
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +D+ A +LRK F DIR +++ LA RL MR L+YL + ++ S E ++I+
Sbjct: 106 QFKTKEDQQAESLRKMFVAMAEDIRVVLIKLADRLHNMRTLNYLKKEKRKEKSRETLEIY 165
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + L +ELEDL FRYL P Y V ++++ + I E+L + L+
Sbjct: 166 APLAHRLGMSKLKWELEDLCFRYLKPDMYYEVSHKVQTNREQREKSIQEAIEKLKETLEK 225
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
++ + GR K +S K+ + +E+ D+ +RV+++ N E
Sbjct: 226 HDIESE------IYGRPKHLFSIYNKMKRKEVEFDEIYDLTAVRVLVE------NVKE-- 271
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II +WK MP R KDYIA PK+N Y+SLH V ++ +G PL E+QIRT
Sbjct: 272 ---CYEVLGIIHEIWKPMPGRFKDYIAMPKSNMYQSLHTTV-IAPSGD--PL-EVQIRTY 324
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEE 437
+M A G A+H YK G E+
Sbjct: 325 DMHKTAEYGIAAHWRYKEGKVGDEK 349
>gi|304309936|ref|YP_003809534.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [gamma
proteobacterium HdN1]
gi|301795669|emb|CBL43868.1| Guanosine-3\',5\'-bis(Diphosphate) 3\'-pyrophosphohydrolase [gamma
proteobacterium HdN1]
Length = 703
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/321 (32%), Positives = 164/321 (51%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ L+V+++LAD+ MDA I AGLL V+E VS + V+ G A+L+ ++
Sbjct: 45 IAHPLAVSMILADMHMDAPSIMAGLLHDVIEDTHVSKEAVKQEFGETVANLVDGVSKIGA 104
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+K + + A RK L DIR +++ LA RL MR L L ++ I+ E
Sbjct: 105 ---IKFESKAEAQAQNFRKMMLAMTKDIRVILVKLADRLHNMRTLAVLHPQKRRRIATET 161
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + N + ELEDL F+ ++P + + K +I +E L+
Sbjct: 162 LEIYAPIAYRLGMNEVRIELEDLGFQAIYPMRATRIKKAIIKARGTRKDMIVSIQEMLVH 221
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L+ + A ++ GR K YS +K+ + E+ DV G R+I+
Sbjct: 222 ALEHNHLPARVI------GREKHLYSIYQKMKTQRKPFSEIMDVYGFRIIVDNVD----- 270
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
ACY + +L+ +P R KDYIA PK+NGY+SLH + GK +EIQ
Sbjct: 271 ------ACYRALGTVHNLYTPIPGRFKDYIAIPKSNGYQSLHTTL----KGKNGVPIEIQ 320
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRTE+M+ +A +G ASH YK
Sbjct: 321 IRTEDMEDMANSGIASHWLYK 341
>gi|289646376|ref|ZP_06477719.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Pseudomonas
syringae pv. aesculi str. 2250]
Length = 701
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 162/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + + + G A L+ V
Sbjct: 46 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALSAQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ ++P ++ ++ K L++ +E L
Sbjct: 163 LEIYAPIANRLGMHSVRIEFEDLGFKAMYPMRSSRINQAVKRARGNRKELVNKIEESLSH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D D V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAVDGIEGD------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|259046671|ref|ZP_05737072.1| GTP diphosphokinase [Granulicatella adiacens ATCC 49175]
gi|259036836|gb|EEW38091.1| GTP diphosphokinase [Granulicatella adiacens ATCC 49175]
Length = 744
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 161/319 (50%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L++D + I+ G L VVE G SI + G A L+ ++ +
Sbjct: 61 IQVAGILAELKLDPDTIATGFLHDVVEDTGFSIDDIEYEFGKDVAFLVEGVTKLGK---I 117
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + ++ A RK L D+R +++ LA RL +R L + +Q MI+ E ++I+
Sbjct: 118 KYKSHAEQQAENHRKMLLAMANDLRVIMVKLADRLHNLRTLKFHKPEKQRMIAEETLEIY 177
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED S RYL P Y + + S + I+ E + + K
Sbjct: 178 APLAHRLGMNKIKWELEDTSLRYLNPQQYYRIVHLMNSKRDEREEYIETTIENIKEATK- 236
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
DL + + GR K YS +K+ + E+ D+L +RV++ +
Sbjct: 237 -----DLEIEAVIYGRPKHIYSIYRKMKDQKKQFSEIYDLLAIRVLVDSIKD-------- 283
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKAN Y+S+H V + G RP+ EIQIRT
Sbjct: 284 ---CYAVLGAIHTKWKPMPGRFKDYIAIPKANMYQSIHTTV-IGPGG--RPV-EIQIRTF 336
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 337 EMHQVAEYGVAAHWAYKEG 355
>gi|386402437|ref|ZP_10087215.1| (p)ppGpp synthetase, RelA/SpoT family [Bradyrhizobium sp. WSM1253]
gi|385743063|gb|EIG63259.1| (p)ppGpp synthetase, RelA/SpoT family [Bradyrhizobium sp. WSM1253]
Length = 761
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 164/329 (49%), Gaps = 25/329 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ L VA +L DL++D I A LL +E + ++ G L+ ++K
Sbjct: 81 FSHPLEVAAILTDLKLDDATIVAALLHDTIEDTEATRAEIDQIFGPEIGALVEGLTKLKR 140
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+L + + A LRK L D +R L++ LA RL MR LD++P + I+ E
Sbjct: 141 ---LELVSREAKQAENLRKLLLAIADDVRVLLVKLADRLHNMRTLDFVPTESRRRIAEET 197
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+APLA + + ELEDLSFR L P +Y V L + ++ LI ++QL
Sbjct: 198 LDIYAPLAGRMGMQEMREELEDLSFRTLDPEAYSVVMQRLDALAERNRNLIGEIEDQLSN 257
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L+ A V GR K +S K+ + E+++D+ G RV+ VN
Sbjct: 258 NLRHRGLGA------RVYGRRKKPFSIWTKMERKSVGFEQLSDIFGFRVV-------VND 304
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
E ACY I+ + W +P R KDYI+ PK N YRS+H V N + +E+Q
Sbjct: 305 IE----ACYRALGIVHTNWPVVPGRFKDYISTPKQNDYRSIHTTVIGPGNQR----VELQ 356
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
IRTE MD +A G A+H FYK G+ +P E
Sbjct: 357 IRTEAMDQIAERGIAAHVFYKEGVGSPTE 385
>gi|422643732|ref|ZP_16706871.1| RelA/SpoT protein [Pseudomonas syringae pv. maculicola str. ES4326]
gi|330957285|gb|EGH57545.1| RelA/SpoT protein [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 701
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 162/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + + + G A L+ V
Sbjct: 46 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALSAQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ ++P ++ ++ K L++ +E L
Sbjct: 163 LEIYAPIANRLGMHNVRIEFEDLGFKAMYPMRSSRINQAVKRARGNRKELVNKIEESLSH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D D V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAVDGIEGD------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|422607277|ref|ZP_16679278.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Pseudomonas
syringae pv. mori str. 301020]
gi|330890920|gb|EGH23581.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Pseudomonas
syringae pv. mori str. 301020]
Length = 701
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 162/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + + + G A L+ V
Sbjct: 46 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALSAQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ ++P ++ ++ K L++ +E L
Sbjct: 163 LEIYAPIANRLGMHSVRIEFEDLGFKAMYPMRSSRINQAVKRARGNRKELVNKIEESLSH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D D V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAVDGIEGD------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|374575965|ref|ZP_09649061.1| (p)ppGpp synthetase, RelA/SpoT family [Bradyrhizobium sp. WSM471]
gi|374424286|gb|EHR03819.1| (p)ppGpp synthetase, RelA/SpoT family [Bradyrhizobium sp. WSM471]
Length = 761
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 164/329 (49%), Gaps = 25/329 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ L VA +L DL++D I A LL +E + ++ G L+ ++K
Sbjct: 81 FSHPLEVAAILTDLKLDDATIVAALLHDTIEDTEATRAEIDQIFGPEIGALVEGLTKLKR 140
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+L + + A LRK L D +R L++ LA RL MR LD++P + I+ E
Sbjct: 141 ---LELVSREAKQAENLRKLLLAIADDVRVLLVKLADRLHNMRTLDFVPTESRRRIAEET 197
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+APLA + + ELEDLSFR L P +Y V L + ++ LI ++QL
Sbjct: 198 LDIYAPLAGRMGMQEMREELEDLSFRTLDPEAYSVVMQRLDALAERNRNLIGEIEDQLSN 257
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L+ A V GR K +S K+ + E+++D+ G RV+ VN
Sbjct: 258 NLRHRGLGA------RVYGRRKKPFSIWTKMERKSVGFEQLSDIFGFRVV-------VND 304
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
E ACY I+ + W +P R KDYI+ PK N YRS+H V N + +E+Q
Sbjct: 305 IE----ACYRALGIVHTNWPVVPGRFKDYISTPKQNDYRSIHTTVIGPGNQR----VELQ 356
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
IRTE MD +A G A+H FYK G+ +P E
Sbjct: 357 IRTEAMDQIAERGIAAHVFYKEGVGSPTE 385
>gi|50086079|ref|YP_047589.1| GTP pyrophosphokinase [Acinetobacter sp. ADP1]
gi|49532055|emb|CAG69767.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((p)ppGpp synthetase) [Acinetobacter sp.
ADP1]
Length = 768
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 193/387 (49%), Gaps = 40/387 (10%)
Query: 57 GEKMVVKLVGAFNELTERMNVLSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTKALSV 116
EK + L F ++E +L + + L K +L++ + ++ S + T + +
Sbjct: 24 AEKTQLDLASWFKRVSE---ILDGAELKQLEKVAQLTLKKVLETTVNHPSNT-FTTGIGM 79
Query: 117 ALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIG-------IGTAHLLHESLRVKN 169
A +LA L +D + +SA +L + V G + I++VRD+ G GT + S ++
Sbjct: 80 ADILAHLHVDEDTLSAAVLYRSVREGIIPIEEVRDKFGEQVHSLVTGTLAMGKLSEMIEK 139
Query: 170 NVNLKLQVLDD--ETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISL 226
N L+ ++ E + + K + D+R +++ LA R +R L R +Q ++
Sbjct: 140 NKRLEDHFNNNQREHLSGIYKMLIAVTEDVRVVLIKLAERTFTLRELAKSSRERQERVAR 199
Query: 227 EVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQL 286
E++ I+APLAH + L +ELEDL+FRYL P Y + T L + +EQ
Sbjct: 200 EILTIYAPLAHRLGIAQLKWELEDLAFRYLAPERYKEIATLLNEKR--------LEREQY 251
Query: 287 LQC--LKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSN 344
+Q LK L++ + + GR K YS +K+ +++ D+ LRV+++
Sbjct: 252 IQSVILKLKTELSEYGINAEITGRVKHIYSIYRKMKSKNLSFDQLYDIRALRVLVQ---- 307
Query: 345 LVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPL 404
N E CY + I+ +W+ +PH+ DYI PKANGYRSLH AV +++N
Sbjct: 308 --NIPE-----CYHSLGIVHQIWRHIPHQFDDYITNPKANGYRSLHTAV-IAENKS---- 355
Query: 405 MEIQIRTEEMDMLAVNGTASHAFYKGG 431
+E+QIRT EM A G SH YK G
Sbjct: 356 LEVQIRTHEMHEEAELGVCSHFNYKEG 382
>gi|418017021|ref|ZP_12656580.1| putative GTP pyrophosphokinase [Streptococcus salivarius M18]
gi|345527714|gb|EGX31022.1| putative GTP pyrophosphokinase [Streptococcus salivarius M18]
Length = 739
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 186/364 (51%), Gaps = 28/364 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL +DA ++ G L VVE ++ + G +++ ++ +
Sbjct: 55 IQVAGILADLHLDAVTVACGFLHDVVEDTEKTLDDLEADFGTDVRNIVDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E M+I+
Sbjct: 112 EYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED+SFRYL + + ++ + L+D +++ +KT
Sbjct: 172 APLAHRLGISRIKWELEDMSFRYLNEVEFYKISHMMKEKRREREELVD----EIVDKIKT 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
LV D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 228 YTAEQGLVGD--VYGRPKHIYSIYRKMRDKKKRFDQIYDLIAIRCVMETHSDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PK+NGY+S+H V G P+ EIQIRT+
Sbjct: 279 ----YAMLGYIHELWRPMPGRFKDYIANPKSNGYQSIHTTV----YGPKGPI-EIQIRTK 329
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFEFDWR 472
EM +A G A+H YK G+ ++K M +L + L+D + + GF +
Sbjct: 330 EMHQVAEYGVAAHWAYKKGIKGKVDSKESALGMNWIKDL--VELQDASNGDAMGFVDSVK 387
Query: 473 DRVF 476
+ +F
Sbjct: 388 EDIF 391
>gi|342213759|ref|ZP_08706478.1| GTP diphosphokinase [Veillonella sp. oral taxon 780 str. F0422]
gi|341597347|gb|EGS39906.1| GTP diphosphokinase [Veillonella sp. oral taxon 780 str. F0422]
Length = 741
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/326 (32%), Positives = 165/326 (50%), Gaps = 25/326 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L VA +L++LQ+D + + LL VVE +S++++ ++ G A L+ ++
Sbjct: 65 LGVATILSELQIDRSTLVSALLHDVVEDTEISLEEIEEQFGPEVAFLVDGVTKLNQ---F 121
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ Q +++ RK L D+R +++ L RL MR L ++ +Q I+ E ++I
Sbjct: 122 QYQTKEEQQIENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKHMRPDKQQRIAQETLEIF 181
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + +ELEDLSFRYL P Y + + + +++ L L+
Sbjct: 182 APLAHRLGIFNIKWELEDLSFRYLEPEKYYDLVQQMSEKRQAREDIVNDTMNTLKDALEH 241
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
AD V+GR K YS KK+ KD R ++ D+ +RVI+ +
Sbjct: 242 AHIKAD------VKGRPKHFYSIYKKMKKDNRDLSQIYDLYAVRVIVDTIPD-------- 287
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY + SLWK +P+R KDYIA PK+N Y+SLH V + G+ +EIQIRT
Sbjct: 288 ---CYAVLGTVHSLWKPLPYRFKDYIAMPKSNMYQSLHTTV-IGTKGQP---VEIQIRTW 340
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEA 438
+M ++ G A+H YK G EA
Sbjct: 341 DMHRVSEYGVAAHWRYKEGNKGKAEA 366
>gi|55822133|ref|YP_140574.1| (p)ppGpp synthetase [Streptococcus thermophilus CNRZ1066]
gi|55738118|gb|AAV61759.1| (p)ppGpp synthetase [Streptococcus thermophilus CNRZ1066]
Length = 739
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 198/400 (49%), Gaps = 29/400 (7%)
Query: 78 LSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQ 137
+S+ +L+ KA + P S + + VA +LADL +DA ++ G L
Sbjct: 20 MSADDLKLVEKAWHYA-PDAHSEQFRQSGEPYIIHPIQVAGILADLHLDAVTVACGFLHD 78
Query: 138 VVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRKFCLTY-YDI 196
VVE ++ + G +++ ++ ++ + +++ A RK + DI
Sbjct: 79 VVEDTEKTLDDLEADFGTDVRNIVDGVTKLGK---VEYKSHEEQLAENHRKMLMAMSKDI 135
Query: 197 RALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYL 256
R +++ LA RL MR L +L + +Q IS E M+I+APLAH + + + +ELED +FRYL
Sbjct: 136 RVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDTAFRYL 195
Query: 257 FPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTM 316
+ + ++ + L+D +++ +KT LV D V GR K YS
Sbjct: 196 NEVEFYKISHMMKEKRREREALVD----EIVYKIKTYTAEQGLVGD--VYGRPKHIYSIF 249
Query: 317 KKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKD 376
+K+ + +++ D++ +R +++ S++ Y I LW+ MP R KD
Sbjct: 250 RKMRDKKKRFDQIYDLIAIRCVMETHSDV-----------YAMLGYIHELWRPMPGRFKD 298
Query: 377 YIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNPE 436
YIA PK+NGY+S+H V G P+ EIQIRT++M +A G A+H YK G+
Sbjct: 299 YIANPKSNGYQSIHTTV----YGPKGPI-EIQIRTKKMHQVAEYGVAAHWAYKKGIKGKV 353
Query: 437 EAKRLKAIMLAAAELAALRLKDIPSTNHKGFEFDWRDRVF 476
++K M +L + L+D + + KGF ++ +F
Sbjct: 354 DSKESALGMNWIKDL--VELQDASNGDAKGFVDSVKEDIF 391
>gi|313891053|ref|ZP_07824672.1| GTP diphosphokinase [Streptococcus pseudoporcinus SPIN 20026]
gi|416852055|ref|ZP_11909200.1| RelA/SpoT family protein [Streptococcus pseudoporcinus LQ 940-04]
gi|313120416|gb|EFR43536.1| GTP diphosphokinase [Streptococcus pseudoporcinus SPIN 20026]
gi|356739544|gb|EHI64776.1| RelA/SpoT family protein [Streptococcus pseudoporcinus LQ 940-04]
Length = 739
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 182/364 (50%), Gaps = 28/364 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADLQ+DA ++ G L VVE +++ + G ++ ++ +
Sbjct: 55 IQVAGILADLQLDAVTVACGFLHDVVEDTDITLDNIEMDFGSDVRDIVDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E M+I+
Sbjct: 112 EYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELEDL+FRYL + + +R + L+D ++++ +
Sbjct: 172 APLAHRLGISRIKWELEDLAFRYLNESEFYKISHMMREKRREREALVDEIVDKIISYTRE 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 232 QGLYGD------VYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCVMETQSDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQIRT+
Sbjct: 279 ----YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQIRTK 329
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFEFDWR 472
+M +A G A+H YK G+ K M EL + L+D + + K F +
Sbjct: 330 DMHQVAEYGVAAHWAYKKGVKGKVSQSDQKVGMNWINEL--VELQDASNGDAKDFVDSVK 387
Query: 473 DRVF 476
+ +F
Sbjct: 388 EDIF 391
>gi|85057876|ref|YP_456792.1| GTP pyrophosphokinase [Aster yellows witches'-broom phytoplasma
AYWB]
gi|42632646|gb|AAS22254.1| ppGpp synthetase [Aster yellows witches'-broom phytoplasma]
gi|84789981|gb|ABC65713.1| GTP pyrophosphokinase [Aster yellows witches'-broom phytoplasma
AYWB]
Length = 745
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 170/329 (51%), Gaps = 27/329 (8%)
Query: 115 SVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLK 174
+V +LA L + + AGLL V+E +++ + G A+L++++ ++ K
Sbjct: 63 AVTKILAQLNSEPNTLMAGLLHDVLEDANATMEDLTSLFGEDVAYLVYQATKLTKIAFHK 122
Query: 175 LQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAP 234
Q D + F DIR +I+ +A RL M+ L+ + +QL I+ E ++IHAP
Sbjct: 123 NQGHADNQQ---KMFLAMAKDIRVVIVKIADRLHNMQTLNVMTSEKQLRIAKETLEIHAP 179
Query: 235 LAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDA 294
L H + + +LEDLS RY+FP Y V +R + +E + + +
Sbjct: 180 LTHRLGLFEIKSQLEDLSLRYVFPQEYYRVSNLIRLKKQQR-------EESIAKIITNIK 232
Query: 295 TLAD--LVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+L D +++ +++GR K+ YS KK++K EE+ D+L +R+I+ P+ +L
Sbjct: 233 SLLDSHQLKNYTIKGRVKNIYSIYKKIVKRKVSFEEIFDLLAIRIIV-PTVDL------- 284
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + +P R KDYIA PK N Y+SLH V D L E+QIRT+
Sbjct: 285 ---CYQCLGIIHGHFSPLPLRFKDYIAVPKPNLYQSLHTTVLTKDGS----LFEMQIRTQ 337
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRL 441
EMD +A G A+H YK T +EAK+L
Sbjct: 338 EMDEIAEKGIAAHWAYKENKTYSQEAKQL 366
>gi|28867313|ref|NP_789932.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pseudomonas syringae pv. tomato str. DC3000]
gi|213970698|ref|ZP_03398823.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Pseudomonas
syringae pv. tomato T1]
gi|301382585|ref|ZP_07231003.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Pseudomonas
syringae pv. tomato Max13]
gi|302063048|ref|ZP_07254589.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Pseudomonas
syringae pv. tomato K40]
gi|302133604|ref|ZP_07259594.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Pseudomonas
syringae pv. tomato NCPPB 1108]
gi|422659953|ref|ZP_16722373.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Pseudomonas
syringae pv. lachrymans str. M302278]
gi|28850547|gb|AAO53627.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Pseudomonas
syringae pv. tomato str. DC3000]
gi|213924532|gb|EEB58102.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Pseudomonas
syringae pv. tomato T1]
gi|331018566|gb|EGH98622.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Pseudomonas
syringae pv. lachrymans str. M302278]
Length = 701
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 162/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + + + G A L+ V
Sbjct: 46 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALSAQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ ++P ++ ++ K L++ +E L
Sbjct: 163 LEIYAPIANRLGMHSVRIEFEDLGFKAMYPMRSSRINQAVKRARGNRKELVNKIEESLSH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D D V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAVDGIEGD------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|389571985|ref|ZP_10162073.1| GTP diphosphokinase [Bacillus sp. M 2-6]
gi|388428471|gb|EIL86268.1| GTP diphosphokinase [Bacillus sp. M 2-6]
Length = 736
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 167/324 (51%), Gaps = 25/324 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL+MD I+ G L VVE V+++ +++ A L+ ++ +
Sbjct: 55 IQVAGILVDLEMDPSTIAGGFLHDVVEDTDVTLEDLKEHFNEEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP+ +Q IS E ++I
Sbjct: 112 KYKSQEEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ + +D +++ +K
Sbjct: 172 APLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKRKRAEREEYLD----EVVNEVKD 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ + S GR K YS +K++ + E+ D+L +R+++ +
Sbjct: 228 RVSEVNIKAEFS--GRPKHIYSIYRKMVMQNKQFNEIYDLLAVRILVDSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PK N Y+SLH V + G PL E+QIRT
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGD--PL-EVQIRTV 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPE 436
EM +A G A+H YK G + E
Sbjct: 331 EMHEIAEYGIAAHWAYKEGKESAE 354
>gi|218192804|gb|EEC75231.1| hypothetical protein OsI_11504 [Oryza sativa Indica Group]
Length = 761
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 174/338 (51%), Gaps = 26/338 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVE-SGGVSIQQVRDRIGIGTAHLLHE--------S 164
+ VA +L + ++D E I+AGLL VE + V+ +++ + G+ ++
Sbjct: 68 VEVARILGEHELDWESIAAGLLHDTVEDTDMVTFERIENEFGVTVRRIVEGETKVSKLGK 127
Query: 165 LRVKNNVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLM 223
L+ KN N K D A LR+ F ++R +I+ LA RL MR L ++P+++Q
Sbjct: 128 LQCKNEGNSK----QDVKAEDLRQMFLAMTEEVRVIIVKLADRLHNMRTLTHMPQHKQYA 183
Query: 224 ISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYL----FVDTWLRSHETGSKPLI 279
I++E +++ APLA + + ELE LSF Y+ P + V+ ++HE +
Sbjct: 184 IAMETLQVFAPLAKLLGMYRIKSELEYLSFMYMNPGDFAELKKRVEDLYKAHEQELEEAN 243
Query: 280 DIYKEQLLQCLKTDATLADLVE-DVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVI 338
I E++ + DLV + V+ K YS K +LK E+N V LR+I
Sbjct: 244 QILGEKI-----AEDQFLDLVSVETQVRSVCKELYSIYKTVLKSKSSINEINQVAQLRII 298
Query: 339 IKP-SSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSD 397
IKP S N V ++ CY ++ +W +P KDYIA PK NGY+SLH V +
Sbjct: 299 IKPKSCNGVGPLCTAQQICYHVLGLVHGIWTPIPQAVKDYIATPKPNGYQSLHTTV-IPF 357
Query: 398 NGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNP 435
++ +E+QIRTE+MD++A G A+H +G ++ P
Sbjct: 358 LNESMFHLEVQIRTEDMDLIAERGIAAHYSGRGVVSGP 395
>gi|332522744|ref|ZP_08398996.1| GTP diphosphokinase [Streptococcus porcinus str. Jelinkova 176]
gi|332314008|gb|EGJ26993.1| GTP diphosphokinase [Streptococcus porcinus str. Jelinkova 176]
Length = 739
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 182/364 (50%), Gaps = 28/364 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADLQ+DA ++ G L VVE +++ + G ++ ++ +
Sbjct: 55 IQVAGILADLQLDAVTVACGFLHDVVEDTDITLDNIEMDFGSDVRDIVDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E M+I+
Sbjct: 112 EYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELEDL+FRYL + + +R + L+D ++++ +
Sbjct: 172 APLAHRLGISRIKWELEDLAFRYLNESEFYKISHMMREKRREREALVDEIVDKIITYTRE 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 232 QGLYGD------VYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCVMETQSDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQIRT+
Sbjct: 279 ----YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQIRTK 329
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFEFDWR 472
+M +A G A+H YK G+ K M EL + L+D + + K F +
Sbjct: 330 DMHQVAEYGVAAHWAYKKGVKGKVSQSDQKVGMNWINEL--VELQDASNGDAKDFVDSVK 387
Query: 473 DRVF 476
+ +F
Sbjct: 388 EDIF 391
>gi|423078898|ref|ZP_17067574.1| GTP diphosphokinase, partial [Lactobacillus rhamnosus ATCC 21052]
gi|357548801|gb|EHJ30660.1| GTP diphosphokinase, partial [Lactobacillus rhamnosus ATCC 21052]
Length = 760
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 112/322 (34%), Positives = 167/322 (51%), Gaps = 25/322 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD E +++G L VVE +++ + + G A ++ ++ +
Sbjct: 74 IQVAGILAELKMDPETVASGYLHDVVEDKNITLGDIEEVFGHDVAVIVDGVTKLSKVTYV 133
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ DE A RK L D+R +++ LA RL MR L +L +Q I+ E ++I+
Sbjct: 134 AHK---DELAENHRKMLLAMAKDLRVIMVKLADRLHNMRTLQHLRPDKQRRIANETLEIY 190
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + + +ELEDLS RYL P Y + + S T + I E++ +
Sbjct: 191 APLADRLGISTIKWELEDLSLRYLNPQQYYRIAHLMNSKRTEREAYIQEAIEEIKKA--- 247
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
LADL + GR K YS KK+ + +E+ D+L +RVI + +
Sbjct: 248 ---LADLHIKYEIYGRPKHIYSIYKKMRDKHKQFDELYDLLAIRVITETIKD-------- 296
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKAN Y+S+H V + GK PL E+QIRTE
Sbjct: 297 ---CYAVLGAIHTKWKPMPGRFKDYIAMPKANLYQSIHTTV-IGPMGK--PL-EVQIRTE 349
Query: 413 EMDMLAVNGTASHAFYKGGLTN 434
EM +A G A+H YK G T+
Sbjct: 350 EMHHVAEYGVAAHWAYKEGQTS 371
>gi|237797791|ref|ZP_04586252.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|331020641|gb|EGI00698.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Pseudomonas
syringae pv. oryzae str. 1_6]
Length = 701
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 162/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + + + G A L+ V
Sbjct: 46 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALSAQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ ++P ++ ++ K L++ +E L
Sbjct: 163 LEIYAPIANRLGMHNVRIEFEDLGFKAMYPMRSSRINQAVKRARGNRKELVNKIEESLSH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D D V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAVDGIEGD------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|229552374|ref|ZP_04441099.1| GTP diphosphokinase [Lactobacillus rhamnosus LMS2-1]
gi|229314276|gb|EEN80249.1| GTP diphosphokinase [Lactobacillus rhamnosus LMS2-1]
Length = 769
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 112/322 (34%), Positives = 167/322 (51%), Gaps = 25/322 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD E +++G L VVE +++ + + G A ++ ++ +
Sbjct: 83 IQVAGILAELKMDPETVASGYLHDVVEDTNITLGDIEEVFGHDVAVIVDGVTKLSKVTYV 142
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ DE A RK L D+R +++ LA RL MR L +L +Q I+ E ++I+
Sbjct: 143 AHK---DELAENHRKMLLAMAKDLRVIMVKLADRLHNMRTLQHLRPDKQRRIANETLEIY 199
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + + +ELEDLS RYL P Y + + S T + I E++ +
Sbjct: 200 APLADRLGISTIKWELEDLSLRYLNPQQYYRIAHLMNSKRTEREAYIQEAIEEIKKA--- 256
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
LADL + GR K YS KK+ + +E+ D+L +RVI + +
Sbjct: 257 ---LADLHIKYEIYGRPKHIYSIYKKMRDKHKQFDELYDLLAIRVITETIKD-------- 305
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKAN Y+S+H V + GK PL E+QIRTE
Sbjct: 306 ---CYAVLGAIHTKWKPMPGRFKDYIAMPKANLYQSIHTTV-IGPMGK--PL-EVQIRTE 358
Query: 413 EMDMLAVNGTASHAFYKGGLTN 434
EM +A G A+H YK G T+
Sbjct: 359 EMHHVAEYGVAAHWAYKEGQTS 380
>gi|153004178|ref|YP_001378503.1| (p)ppGpp synthetase I SpoT/RelA [Anaeromyxobacter sp. Fw109-5]
gi|152027751|gb|ABS25519.1| (p)ppGpp synthetase I, SpoT/RelA [Anaeromyxobacter sp. Fw109-5]
Length = 738
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 166/321 (51%), Gaps = 24/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L L VA LLA+L++D + GLL +E + +++ + G A L+ ++
Sbjct: 60 LIHPLEVAGLLAELKLDEASVVTGLLHDTIEDTLATKEEIAELFGPEIAELVDGVTKLSQ 119
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
Q +++ A RK + DIR L++ LA R MR LD++ Q I+ E
Sbjct: 120 FSAANTQ--EEKQAENFRKMVVAMAKDIRVLLVKLADRTHNMRTLDHMKPESQERIARET 177
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+APLA+ + +L ELEDLSF+YL P Y+ + T + + + + E+++
Sbjct: 178 LDIYAPLANRLGIQWLKSELEDLSFKYLRPQDYVELSTRVEAEQKEKGEFV----EEVVD 233
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
++T T A + + V GR K YS +K+ + +++ DV+G RVI+ +
Sbjct: 234 LIRTRLTGAGI--NAQVSGRVKHVYSIWRKMRQLDVDFDQIQDVIGFRVIVDSVAE---- 287
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + II SLWK +P R KDYIA PK N Y+SLH V V G+ +E+Q
Sbjct: 288 -------CYESLGIIHSLWKPVPGRFKDYIAIPKPNLYQSLHTTV-VGPRGER---IEVQ 336
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT+EM +A G A+H YK
Sbjct: 337 IRTKEMHRIAEEGVAAHWAYK 357
>gi|383764936|ref|YP_005443918.1| GTP pyrophosphokinase [Caldilinea aerophila DSM 14535 = NBRC
104270]
gi|381385204|dbj|BAM02021.1| GTP pyrophosphokinase [Caldilinea aerophila DSM 14535 = NBRC
104270]
Length = 825
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 113/335 (33%), Positives = 170/335 (50%), Gaps = 35/335 (10%)
Query: 105 DSRSP-LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHE 163
DS P +T ++V +L +L+MD E ++AGLL V E I+ +R G A L+
Sbjct: 137 DSGEPYITHPIAVTEILTELRMDPEALAAGLLHDVAEDTEFDIEYLRIHFGQTIARLVDG 196
Query: 164 SLRVKNNVNLKLQV--------LDDETAAALRKFCL-TYYDIRALILDLAIRLDMMRHLD 214
++K K+Q +++ A +LRK + + D+R LI+ LA RL MR L
Sbjct: 197 VTKLK-----KIQAKKSASEASTNNQKAESLRKMMMASIEDLRVLIIKLADRLHNMRTLG 251
Query: 215 YLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETG 274
+++ I+ E + +AP+A+ + + ELEDLSFRYL P SY + ++ E+
Sbjct: 252 GQKEHKRRRIARETLDYYAPIANRLGIWRIKSELEDLSFRYLNPTSYKEIKNAIQQKESD 311
Query: 275 SKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLG 334
+ LI K +L + L A+ V GR K YS +K+ + G +++ DV G
Sbjct: 312 RQKLIIRIKTELERALAEAGIHAE------VYGRPKHIYSIYRKMERKGVGFDQIYDVHG 365
Query: 335 LRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVD 394
RVI+ + CY +I ++W +P DYIA PK N Y+SLH AV
Sbjct: 366 FRVIVDTVAE-----------CYAALGVIHTMWHPIPGEFDDYIANPKNNMYQSLHTAVR 414
Query: 395 VSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYK 429
+ +G RP+ EIQIRT EM A G A+H YK
Sbjct: 415 IKKDG--RPV-EIQIRTREMHEKAELGVAAHWQYK 446
>gi|410724219|ref|ZP_11363418.1| (p)ppGpp synthetase, RelA/SpoT family [Clostridium sp. Maddingley
MBC34-26]
gi|410602505|gb|EKQ56985.1| (p)ppGpp synthetase, RelA/SpoT family [Clostridium sp. Maddingley
MBC34-26]
Length = 738
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 110/330 (33%), Positives = 167/330 (50%), Gaps = 25/330 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
++VA +LA+L MD I AGLL V+E S + A+L+ ++ +
Sbjct: 48 IAVAEILAELGMDTNTIVAGLLHDVIEDTDCSYDETVKLFNAEIANLVEGVTKLTKLGEM 107
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A +RK L DIR +I+ LA RL MR L ++P +Q + E + I+
Sbjct: 108 EYKTKEEQQADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKFMPEKKQKNKAKETLDIY 167
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYL-FVDTWLRSHETGSKPLIDIYKEQLLQCLK 291
APLAH + + + +ELEDL FRYL Y VD+ + DI K+ L + L+
Sbjct: 168 APLAHRLGMSKIKWELEDLCFRYLHEKEYYELVDSIAEKRVERETYIKDIVKD-LYEKLE 226
Query: 292 TDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEV 351
T +D + GR K YS KK++ + E++ D+ +RV++ +
Sbjct: 227 TSGIHSD------IDGRPKHFYSIYKKMVSKNKSIEQIFDLTAIRVLVHSVKD------- 273
Query: 352 GERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRT 411
CY I+ ++++ +P R KDYIA PK N Y+SLH V + GKT EIQIRT
Sbjct: 274 ----CYGVLGIVHTIYRPIPGRFKDYIAMPKPNMYQSLHTTV-IGPQGKT---FEIQIRT 325
Query: 412 EEMDMLAVNGTASHAFYK-GGLTNPEEAKR 440
EM A G A+H YK G PE+ K+
Sbjct: 326 FEMHKTAEYGIAAHWKYKEGDAGKPEQDKQ 355
>gi|88797955|ref|ZP_01113542.1| GTP pyrophosphokinase [Reinekea blandensis MED297]
gi|88779152|gb|EAR10340.1| GTP pyrophosphokinase [Reinekea sp. MED297]
Length = 744
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 108 SPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLR- 166
S L + +LADL +D + + A +L + V ++++ VRD+ G A+L+ +R
Sbjct: 62 SAFKTGLEMVEILADLGLDQDALVAAVLYRTVREEELALETVRDQFGPKIANLIQGVMRM 121
Query: 167 --VKNNVNLKLQVL--DDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQ 221
+ N + + V ++ A+RK + D +R ++ LA R +R + + P ++
Sbjct: 122 AAISNRKSTRDSVFGQNETQGEAVRKMLVAMIDDVRVALIKLAERTCAIRAIKHSPAARR 181
Query: 222 LMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDI 281
++ EV I+APLAH + +L +ELEDL+FRY+ P Y + L + I
Sbjct: 182 YRVAREVFDIYAPLAHRLGVGHLKWELEDLAFRYIEPQDYKKIAKLLDEKRLDRQEYI-- 239
Query: 282 YKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKP 341
Q +Q L T+ V+ +QGR K YS +K+ + +V D+ R+++
Sbjct: 240 ---QKVQTLITEEIEKANVQ-AEIQGRAKHIYSIWRKMKRKNITFSQVYDIRAFRILV-- 293
Query: 342 SSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKT 401
EV R CYT I+ S+W+ +P DYIA PK NGYRSLH AV + GK
Sbjct: 294 -------PEV--RDCYTVLGIVHSMWRHIPREFDDYIASPKQNGYRSLHTAV-IGPEGK- 342
Query: 402 RPLMEIQIRTEEMDMLAVNGTASHAFYKG 430
++EIQIRT+EM A G +H YKG
Sbjct: 343 --VVEIQIRTQEMHDDAELGVCAHWLYKG 369
>gi|421527317|ref|ZP_15973920.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium nucleatum ChDC F128]
gi|402256525|gb|EJU07004.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium nucleatum ChDC F128]
Length = 725
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 168/320 (52%), Gaps = 33/320 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L D++MD + I AGLL VVE + I ++ G A L+
Sbjct: 51 VEVAKILMDMKMDTDTIVAGLLHDVVEDTLIPIADIKYNFGDTVATLVDGVT-------- 102
Query: 174 KLQVLDDET---AAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVM 229
KL+ L + T A +RK L +IR +++ LA RL MR L ++ +Q IS E +
Sbjct: 103 KLKALPNGTKNQAENIRKMILAMAENIRVILIKLADRLHNMRTLKFMKPEKQQSISKETL 162
Query: 230 KIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQC 289
I+APLAH + + ELED++F YL +L + + + + K I+ + +++
Sbjct: 163 DIYAPLAHRLGMAKIKSELEDMAFSYLHHDEFLEIKRLVDNTKEERKDYIENFIRTIIR- 221
Query: 290 LKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTS 349
TL+DL V+GR+K YS KK+ + G+ +++ D++G+RVI+ +
Sbjct: 222 -----TLSDLGIKAEVKGRFKHFYSIYKKMYQKGKEFDDIYDLMGVRVIVDDKA------ 270
Query: 350 EVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQI 409
CY I+ S + +P R KDYIA PK+N Y+S+H + V GK +EIQI
Sbjct: 271 -----TCYHVLGIVHSQYTPVPGRFKDYIAVPKSNNYQSIHTTI-VGPLGK---FIEIQI 321
Query: 410 RTEEMDMLAVNGTASHAFYK 429
RT++MD +A G A+H YK
Sbjct: 322 RTKDMDDIAEEGIAAHWNYK 341
>gi|299535673|ref|ZP_07048994.1| GTP pyrophosphokinase [Lysinibacillus fusiformis ZC1]
gi|424739057|ref|ZP_18167479.1| GTP pyrophosphokinase [Lysinibacillus fusiformis ZB2]
gi|298728873|gb|EFI69427.1| GTP pyrophosphokinase [Lysinibacillus fusiformis ZC1]
gi|422946922|gb|EKU41324.1| GTP pyrophosphokinase [Lysinibacillus fusiformis ZB2]
Length = 731
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 161/321 (50%), Gaps = 29/321 (9%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+LQMD E ++AG L VVE + + G A L+ ++
Sbjct: 55 VQVAGILAELQMDPETVAAGFLHDVVEDTDFTRDDLVREFGEEVAVLVDGVTKLG----- 109
Query: 174 KLQVLDDETAAA---LRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMK 230
K++ L E A + F DIR +++ LA RL MR L +LP +Q IS E ++
Sbjct: 110 KIKYLSKEAQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPAEKQRRISKETLE 169
Query: 231 IHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCL 290
I APLAH + + + +ELED + RYL P Y + + ++ + Y E ++ +
Sbjct: 170 IFAPLAHRLGISTVKWELEDTALRYLNPQQYYRIVSLMKKKRDER----EAYLENVMAEM 225
Query: 291 KTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSE 350
K+ ++ D + GR K YS +K++ + E+ D+L +RV++ +
Sbjct: 226 KSQLNEVEI--DADIYGRPKHIYSIYRKMVLQKKQFNEIYDLLAIRVLVDSIKD------ 277
Query: 351 VGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIR 410
CY I+ +LWK MP R KDYIA PK N Y+SLH V G +E+QIR
Sbjct: 278 -----CYAVLGIVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV----IGPYGDPLEVQIR 328
Query: 411 TEEMDMLAVNGTASHAFYKGG 431
T+EM +A G A+H YK G
Sbjct: 329 TKEMHKIAEYGIAAHWAYKEG 349
>gi|52141100|ref|YP_085730.1| GTP diphosphokinase [Bacillus cereus E33L]
gi|51974569|gb|AAU16119.1| GTP diphosphokinase (GTP pyrophosphokinase) [Bacillus cereus E33L]
Length = 727
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 163/321 (50%), Gaps = 25/321 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD +SAG L VVE ++++ + A L+ ++ +
Sbjct: 55 IQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP+ +Q I+ E ++I
Sbjct: 112 KYKSHEQQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED S RYL P Y + ++ + +D +++ ++
Sbjct: 172 APLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLD----EVMTGIR- 226
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
L ++ + GR K YS +K+ + E+ D+L +RV++ +
Sbjct: 227 -EKLDEVAIQPEISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+QIRT+
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTV-IGPKGD--PL-EVQIRTK 330
Query: 413 EMDMLAVNGTASHAFYKGGLT 433
EM +A G A+H YK G T
Sbjct: 331 EMHEIAEFGIAAHWAYKEGKT 351
>gi|218782928|ref|YP_002434246.1| (p)ppGpp synthetase I SpoT/RelA [Desulfatibacillum alkenivorans
AK-01]
gi|218764312|gb|ACL06778.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfatibacillum alkenivorans
AK-01]
Length = 713
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 108/332 (32%), Positives = 166/332 (50%), Gaps = 25/332 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L+ L VA +LAD+ +D I AGLL VVE + +Q+ G AH++ ++
Sbjct: 46 LSHPLEVAGILADMHLDVTSIGAGLLHDVVEDTHATPEQIDSMFGADMAHIVKGVTKLSK 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L + + A ++RK L D IR +++ LA R+ MR L + +Q+ I+ E
Sbjct: 106 ---LSFRSSQERQAESIRKMILAMADDIRVVLIKLADRVHNMRTLQFQKENKQVRIAQET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+AP+A + ++ ELED S YL+P Y ++ L++ + + D Y E++
Sbjct: 163 LDIYAPIAGRLGIYWIKQELEDRSSMYLYPEQYREIEN-LQNQKKHER---DAYVEKVKG 218
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L A L + GRYKS YS K+L+ EEV D++ RVI+
Sbjct: 219 ILHDKLGEAGL--KGQILGRYKSFYSIYNKMLQQNLEFEEVYDIIAFRVILDTIPQ---- 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY ++ ++WK + + KDYI PK N Y+SLH V G MEIQ
Sbjct: 273 -------CYEALGLVHNIWKPIAKKFKDYIGNPKPNMYQSLHTTV----IGPFGERMEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAKR 440
IRT+EMD +A +G A+H YK G E+ ++
Sbjct: 322 IRTQEMDAVAKSGIAAHWSYKEGKQADEKTRQ 353
>gi|419706966|ref|ZP_14234473.1| GTP pyrophosphokinase (Stringent response) [Streptococcus
salivarius PS4]
gi|383283394|gb|EIC81351.1| GTP pyrophosphokinase (Stringent response) [Streptococcus
salivarius PS4]
Length = 739
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 188/364 (51%), Gaps = 28/364 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL +DA ++ G L VVE ++ + G+ +++ ++ +
Sbjct: 55 IQVAGILADLHLDAVTVACGFLHDVVEDTEKTLDDLEADFGLDVRNIVDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E M+I+
Sbjct: 112 EYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED++FRYL + + ++ + L+D +++ +KT
Sbjct: 172 APLAHRLGISRIKWELEDMAFRYLNEVEFYKISHMMKEKRREREELVD----EIVAKIKT 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ LV D + GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 228 YTSEQGLVGD--IYGRPKHIYSIYRKMRDKKKRFDQIYDLIAIRCVMETHSDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PK+NGY+S+H V G P+ EIQIRT+
Sbjct: 279 ----YAMLGYIHELWRPMPGRFKDYIANPKSNGYQSIHTTV----YGPKGPI-EIQIRTK 329
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFEFDWR 472
EM +A G A+H YK G+ ++K M +L + L+D + + GF +
Sbjct: 330 EMHQVAEYGVAAHWAYKKGIKGKVDSKESALGMNWIKDL--VELQDASNGDAMGFVDSVK 387
Query: 473 DRVF 476
+ +F
Sbjct: 388 EDIF 391
>gi|225867804|ref|YP_002743752.1| GTP pyrophosphokinase [Streptococcus equi subsp. zooepidemicus]
gi|225701080|emb|CAW97905.1| GTP pyrophosphokinase [Streptococcus equi subsp. zooepidemicus]
Length = 739
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 183/368 (49%), Gaps = 28/368 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +LADL +DA ++ G L VVE ++++ + G ++ ++
Sbjct: 51 IVHPIQVAAILADLHLDAVTVACGFLHDVVEDTDITLEDIEFDFGKDVRDIVDGVTKLGK 110
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E
Sbjct: 111 ---VEYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRET 167
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLAH + + + +ELEDL+FRYL + + +R + L+D ++
Sbjct: 168 MEIYAPLAHRLGISRIKWELEDLAFRYLNEIEFYKISHMMREKRREREALVD----DIVT 223
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+K T L DV GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 224 KIKAYTTDQGLYGDVY--GRPKHIYSVYRKMRDKKKRFDQIFDLIAIRCVMETQSDV--- 278
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
Y I LW+ MP R KDYIA PK NGY+S+H V G P+ EIQ
Sbjct: 279 --------YAMVGYIHELWRPMPGRFKDYIAAPKTNGYQSIHTTV----YGPKGPI-EIQ 325
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFE 468
IRT+EM +A G A+H YK G+ K M EL + L+ + + KGF
Sbjct: 326 IRTKEMHQVAEYGVAAHWAYKKGIRGKINQAEQKVGMNWIKEL--VELQAASNGDAKGFV 383
Query: 469 FDWRDRVF 476
++ +F
Sbjct: 384 DSVKEDIF 391
>gi|418994361|ref|ZP_13541996.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG290]
gi|377744158|gb|EHT68136.1| GTP pyrophosphokinase [Staphylococcus aureus subsp. aureus CIG290]
Length = 729
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 171/319 (53%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V++ A ++ ++K +
Sbjct: 55 IQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKEMFNEEVARIVDGVTKLKK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L + R +Q+ IS E ++I+
Sbjct: 112 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMLREKQIRISRETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I E + ++T
Sbjct: 172 APLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYI----ETAIDRIRT 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ D++ GR K YS +K++K + +++ D+L +RVI+ N +N
Sbjct: 228 EMDRMNIEGDIN--GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV----NSIND---- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 278 ---CYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV-VGPNGD--PL-EIQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A +G A+H YK G
Sbjct: 331 DMHEIAEHGVAAHWAYKEG 349
>gi|256004313|ref|ZP_05429295.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium thermocellum DSM
2360]
gi|385778263|ref|YP_005687428.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium thermocellum DSM 1313]
gi|419722157|ref|ZP_14249305.1| RelA/SpoT family protein [Clostridium thermocellum AD2]
gi|419724255|ref|ZP_14251323.1| RelA/SpoT family protein [Clostridium thermocellum YS]
gi|255991747|gb|EEU01847.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium thermocellum DSM
2360]
gi|316939943|gb|ADU73977.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium thermocellum DSM
1313]
gi|380772261|gb|EIC06113.1| RelA/SpoT family protein [Clostridium thermocellum YS]
gi|380781728|gb|EIC11378.1| RelA/SpoT family protein [Clostridium thermocellum AD2]
Length = 724
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 103/323 (31%), Positives = 164/323 (50%), Gaps = 33/323 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL++D I AG+L +VE +I+Q+R+ G A+L+ ++ +
Sbjct: 51 MEVANILADLELDCTAIVAGILHDIVEDTSYTIEQIRENFGDEVANLVDGVTKLGK---I 107
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
++ A LRK F DIR +++ LA RL MR L Y+P +Q+ + E ++I+
Sbjct: 108 PYTTKEELQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMPPEKQIEKAKETLEIY 167
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWL----RSHETGSKPLIDIYKEQLLQ 288
APLAH + + + +ELEDL RYL P Y + + R E +I +E+ ++
Sbjct: 168 APLAHRLGISKIKWELEDLCLRYLDPKGYYDLVNKIAKKRREREAYISEIIKTIQEKTVE 227
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ D ++GR K YS +K+++ + E++ D+ +RVI+ +
Sbjct: 228 ----------IGIDAHIEGRPKHFYSIYRKMVQQNKTIEQIYDLFAVRVIVTTVKD---- 273
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY ++ ++K MP R KDYIA PK N Y+SLH + G E+Q
Sbjct: 274 -------CYAVLGLVHEIFKPMPGRFKDYIAMPKPNMYQSLHTTLI----GHEGVPFEVQ 322
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IRT EM +A G A+H YK G
Sbjct: 323 IRTWEMHRVAEVGIAAHWKYKEG 345
>gi|229013624|ref|ZP_04170755.1| GTP pyrophosphokinase [Bacillus mycoides DSM 2048]
gi|423598283|ref|ZP_17574283.1| GTP pyrophosphokinase [Bacillus cereus VD078]
gi|423660754|ref|ZP_17635923.1| GTP pyrophosphokinase [Bacillus cereus VDM022]
gi|423669987|ref|ZP_17645016.1| GTP pyrophosphokinase [Bacillus cereus VDM034]
gi|423673809|ref|ZP_17648748.1| GTP pyrophosphokinase [Bacillus cereus VDM062]
gi|228747683|gb|EEL97555.1| GTP pyrophosphokinase [Bacillus mycoides DSM 2048]
gi|401236553|gb|EJR43010.1| GTP pyrophosphokinase [Bacillus cereus VD078]
gi|401299114|gb|EJS04714.1| GTP pyrophosphokinase [Bacillus cereus VDM034]
gi|401300795|gb|EJS06384.1| GTP pyrophosphokinase [Bacillus cereus VDM022]
gi|401310175|gb|EJS15500.1| GTP pyrophosphokinase [Bacillus cereus VDM062]
Length = 727
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/323 (33%), Positives = 162/323 (50%), Gaps = 33/323 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD +SAG L VVE ++++ + A L+ ++ +
Sbjct: 55 IQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP+ +Q I+ E ++I
Sbjct: 112 KYKSHEQQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED S RYL P Y + ++ + +D + + LK
Sbjct: 172 APLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVMTGIREKLK- 230
Query: 293 DATLADLVEDVSVQ----GRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+VS+Q GR K YS +K+ + E+ D+L +RV++ +
Sbjct: 231 ---------EVSIQPEISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKD---- 277
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+Q
Sbjct: 278 -------CYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTV-IGPKGD--PL-EVQ 326
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IRT+EM +A G A+H YK G
Sbjct: 327 IRTKEMHEIAEFGIAAHWAYKEG 349
>gi|125973859|ref|YP_001037769.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium thermocellum ATCC
27405]
gi|125714084|gb|ABN52576.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium thermocellum ATCC
27405]
Length = 724
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 103/323 (31%), Positives = 164/323 (50%), Gaps = 33/323 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL++D I AG+L +VE +I+Q+R+ G A+L+ ++ +
Sbjct: 51 MEVANILADLELDCTAIVAGILHDIVEDTSYTIEQIRENFGDEVANLVDGVTKLGK---I 107
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
++ A LRK F DIR +++ LA RL MR L Y+P +Q+ + E ++I+
Sbjct: 108 PYTTKEELQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMPPEKQIEKAKETLEIY 167
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWL----RSHETGSKPLIDIYKEQLLQ 288
APLAH + + + +ELEDL RYL P Y + + R E +I +E+ ++
Sbjct: 168 APLAHRLGISKIKWELEDLCLRYLDPKGYYDLVNKIAKKRREREAYISEIIKTIQEKTVE 227
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ D ++GR K YS +K+++ + E++ D+ +RVI+ +
Sbjct: 228 ----------IGIDAHIEGRPKHFYSIYRKMVQQNKTIEQIYDLFAVRVIVTTVKD---- 273
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY ++ ++K MP R KDYIA PK N Y+SLH + G E+Q
Sbjct: 274 -------CYAVLGLVHEIFKPMPGRFKDYIAMPKPNMYQSLHTTLI----GHEGVPFEVQ 322
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IRT EM +A G A+H YK G
Sbjct: 323 IRTWEMHRVAEVGIAAHWKYKEG 345
>gi|423483983|ref|ZP_17460673.1| GTP pyrophosphokinase [Bacillus cereus BAG6X1-2]
gi|401141534|gb|EJQ49089.1| GTP pyrophosphokinase [Bacillus cereus BAG6X1-2]
Length = 727
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 107/319 (33%), Positives = 160/319 (50%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD +SAG L VVE ++++ + A L+ ++ +
Sbjct: 55 IQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP+ +Q I+ E ++I
Sbjct: 112 KYKSHEQQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED S RYL P Y + ++ + +D + + LK
Sbjct: 172 APLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVMTGIREKLKE 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
A + + GR K YS +K+ + E+ D+L +RV++ +
Sbjct: 232 VAIQPE------ISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+QIRT+
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTV-IGPKGD--PL-EVQIRTK 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 331 EMHEIAEFGIAAHWAYKEG 349
>gi|116627099|ref|YP_819718.1| (p)ppGpp synthetase [Streptococcus thermophilus LMD-9]
gi|116100376|gb|ABJ65522.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Streptococcus thermophilus LMD-9]
Length = 739
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 186/364 (51%), Gaps = 28/364 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL +DA ++ G L VVE ++ + G +++ ++ +
Sbjct: 55 IQVAGILADLHLDAVTVACGFLHDVVEDTEKTLDDLEADFGTDVRNIVDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E M+I+
Sbjct: 112 EYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED +FRYL + + ++ + L+D +++ +KT
Sbjct: 172 APLAHRLGISRIKWELEDTAFRYLNEVEFYKISHMMKEKRREREALVD----EIVDKIKT 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
LV D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 228 YTAEQGLVGD--VYGRPKHIYSIFRKMRDKKKRFDQIYDLIAIRCVMETHSDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PK+NGY+S+H V G P+ EIQIRT+
Sbjct: 279 ----YAMLGYIHELWRPMPGRFKDYIANPKSNGYQSIHTTV----YGPKGPI-EIQIRTK 329
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFEFDWR 472
+M +A G A+H YK G+ ++K M +L + L+D + + KGF +
Sbjct: 330 DMHQVAEYGVAAHWAYKKGIKGKVDSKESALGMNWIKDL--VELQDASNGDAKGFVDSVK 387
Query: 473 DRVF 476
+ +F
Sbjct: 388 EDIF 391
>gi|255564246|ref|XP_002523120.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase, putative
[Ricinus communis]
gi|223537682|gb|EEF39305.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase, putative
[Ricinus communis]
Length = 887
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 170/338 (50%), Gaps = 30/338 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVE-SGGVSIQQVRDRIGIGTAHLLHESLRVK 168
+ + VA +L +L++D E I+AGLL VE + V+ +++ + G H++ +V
Sbjct: 176 IVHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGPTVRHIVEGETKVS 235
Query: 169 NNVNLKLQVLDDET----AAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLM 223
LK + D A LR+ F ++R +I+ LA RL MR L Y+P ++Q
Sbjct: 236 KLGKLKCKNESDSAQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSYMPPHKQSS 295
Query: 224 ISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYK 283
I++E +++ APLA + + ELE+LSF Y P Y + + + D+YK
Sbjct: 296 IAMETLQVFAPLAKLLGMYQIKSELENLSFMYTKPEDYAKIK----------RRVADLYK 345
Query: 284 EQLLQCLKTDATLADLVED----------VSVQGRYKSRYSTMKKLLKDGRIPEEVNDVL 333
E + L+ + L +E+ V+ K YS K +LK EVN +
Sbjct: 346 EHEKELLEANKILEKKIEEDQFLDLMTVKTEVRSACKEPYSIYKAVLKSKSSICEVNQIA 405
Query: 334 GLRVIIKPSSNL-VNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMA 392
LR+I+KP + V ++ CY ++ +W +P KDYIA PK NGY+SLH
Sbjct: 406 QLRIIVKPKPCVGVGPFCTPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTT 465
Query: 393 VDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKG 430
V + ++ +E+Q+RTEEMD++A G A+H Y G
Sbjct: 466 V-IPFLYESMFRLEVQVRTEEMDLIAERGIAAH--YSG 500
>gi|386343774|ref|YP_006039938.1| (p)ppGpp synthetase [Streptococcus thermophilus JIM 8232]
gi|339277235|emb|CCC18983.1| (p)ppGpp synthetase [Streptococcus thermophilus JIM 8232]
Length = 739
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 186/364 (51%), Gaps = 28/364 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL +DA ++ G L VVE ++ + G +++ ++ +
Sbjct: 55 IQVAGILADLHLDAVTVACGFLHDVVEDTEKTLDDLEADFGTDVRNIVDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E M+I+
Sbjct: 112 EYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED +FRYL + + ++ + L+D +++ +KT
Sbjct: 172 APLAHRLGISRIKWELEDTAFRYLNEVEFYKISHMMKEKRREREALVD----EIVDKIKT 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
LV D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 228 YTAEQGLVGD--VYGRPKHIYSIFRKMRDKKKRFDQIYDLIAIRCVMETHSDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PK+NGY+S+H V G P+ EIQIRT+
Sbjct: 279 ----YAMLGYIHELWRPMPGRFKDYIANPKSNGYQSIHTTV----YGPKGPI-EIQIRTK 329
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFEFDWR 472
+M +A G A+H YK G+ ++K M +L + L+D + + KGF +
Sbjct: 330 DMHQVAEYGVAAHWAYKKGIKGKVDSKESALGMNWIKDL--VELQDASNGDAKGFVDSVK 387
Query: 473 DRVF 476
+ +F
Sbjct: 388 EDIF 391
>gi|163942157|ref|YP_001647041.1| (p)ppGpp synthetase I SpoT/RelA [Bacillus weihenstephanensis KBAB4]
gi|229135230|ref|ZP_04264029.1| GTP pyrophosphokinase [Bacillus cereus BDRD-ST196]
gi|229169150|ref|ZP_04296865.1| GTP pyrophosphokinase [Bacillus cereus AH621]
gi|423368453|ref|ZP_17345885.1| GTP pyrophosphokinase [Bacillus cereus VD142]
gi|423489585|ref|ZP_17466267.1| GTP pyrophosphokinase [Bacillus cereus BtB2-4]
gi|423495308|ref|ZP_17471952.1| GTP pyrophosphokinase [Bacillus cereus CER057]
gi|423497898|ref|ZP_17474515.1| GTP pyrophosphokinase [Bacillus cereus CER074]
gi|423519105|ref|ZP_17495586.1| GTP pyrophosphokinase [Bacillus cereus HuA2-4]
gi|423591601|ref|ZP_17567632.1| GTP pyrophosphokinase [Bacillus cereus VD048]
gi|163864354|gb|ABY45413.1| (p)ppGpp synthetase I, SpoT/RelA [Bacillus weihenstephanensis
KBAB4]
gi|228614378|gb|EEK71488.1| GTP pyrophosphokinase [Bacillus cereus AH621]
gi|228648272|gb|EEL04308.1| GTP pyrophosphokinase [Bacillus cereus BDRD-ST196]
gi|401080780|gb|EJP89064.1| GTP pyrophosphokinase [Bacillus cereus VD142]
gi|401151401|gb|EJQ58853.1| GTP pyrophosphokinase [Bacillus cereus CER057]
gi|401160160|gb|EJQ67539.1| GTP pyrophosphokinase [Bacillus cereus HuA2-4]
gi|401161185|gb|EJQ68552.1| GTP pyrophosphokinase [Bacillus cereus CER074]
gi|401231734|gb|EJR38236.1| GTP pyrophosphokinase [Bacillus cereus VD048]
gi|402431821|gb|EJV63885.1| GTP pyrophosphokinase [Bacillus cereus BtB2-4]
Length = 727
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 109/323 (33%), Positives = 162/323 (50%), Gaps = 33/323 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD +SAG L VVE ++++ + A L+ ++ +
Sbjct: 55 IQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP+ +Q I+ E ++I
Sbjct: 112 KYKSHEQQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED S RYL P Y + ++ + +D + + LK
Sbjct: 172 APLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVMTGIREKLK- 230
Query: 293 DATLADLVEDVSVQ----GRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+VS+Q GR K YS +K+ + E+ D+L +RV++ +
Sbjct: 231 ---------EVSIQPEISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKD---- 277
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+Q
Sbjct: 278 -------CYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTV-IGPKGD--PL-EVQ 326
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IRT+EM +A G A+H YK G
Sbjct: 327 IRTKEMHEIAEFGIAAHWAYKEG 349
>gi|319651680|ref|ZP_08005807.1| GTP pyrophosphokinase [Bacillus sp. 2_A_57_CT2]
gi|317396747|gb|EFV77458.1| GTP pyrophosphokinase [Bacillus sp. 2_A_57_CT2]
Length = 744
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 163/319 (51%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL+MD ++AG L VVE +S++ + + A L+ ++ +
Sbjct: 68 IQVAGILADLEMDPSTVAAGFLHDVVEDTEISLENIEESFNSEVAMLVDGVTKLGK---I 124
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP +Q IS E ++I
Sbjct: 125 KYKSQEEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPAEKQRRISNETLEIF 184
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ + +D ++ ++
Sbjct: 185 APLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAEREEYLD----DVINVMR- 239
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
L+++ + GR K YS +K+ + E+ D+L +R+++ +
Sbjct: 240 -GRLSEVSIKSEISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRIVVSSIKD-------- 290
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PK N Y+SLH V + G PL E+QIRT
Sbjct: 291 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKQNMYQSLHTTV-IGPKGD--PL-EVQIRTM 343
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A G A+H YK G
Sbjct: 344 DMHRIAEFGIAAHWAYKEG 362
>gi|366089230|ref|ZP_09455703.1| GTP pyrophosphokinase [Lactobacillus acidipiscis KCTC 13900]
Length = 744
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 112/322 (34%), Positives = 167/322 (51%), Gaps = 29/322 (9%)
Query: 113 ALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVN 172
++ VA +LADL+MD + AG L VVE V++ V + G ++ ++
Sbjct: 54 SIQVAGILADLKMDPATVCAGFLHDVVEDTEVTLGDVGELFGKDVQIIVDGVTKLS---- 109
Query: 173 LKLQVLDDETAAA--LRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVM 229
K++ + + A A RK L D+R +I+ LA RL MR L +L +Q I+ E +
Sbjct: 110 -KIKYISHQEAQAENHRKLLLAMSQDLRVIIVKLADRLHNMRTLSHLRPDKQRRIANETL 168
Query: 230 KIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQC 289
+I+APLA + + + +ELED S RYL P Y + + S T Y EQ+++
Sbjct: 169 EIYAPLADRLGISTIKWELEDTSLRYLNPQQYYRIVHLMNSKRTERLK----YIEQVIEQ 224
Query: 290 LKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTS 349
+K +ADL + + GR K YS +K+ + E++ D++ +RV++K +
Sbjct: 225 IK--KAIADLDLNCEIYGRPKHIYSIYRKMRDQHKQFEQIYDLIAIRVVVKSIKD----- 277
Query: 350 EVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQI 409
CY I + WK MP R KDYIA PKAN Y+SLH V + G RP E+QI
Sbjct: 278 ------CYAVLGAIHTRWKPMPGRFKDYIAMPKANMYQSLHTTV-LGPAG--RPF-EVQI 327
Query: 410 RTEEMDMLAVNGTASHAFYKGG 431
RTEEM +A G A+H YK G
Sbjct: 328 RTEEMHQVAEYGIAAHWAYKEG 349
>gi|407980717|ref|ZP_11161494.1| GTP diphosphokinase [Bacillus sp. HYC-10]
gi|407412525|gb|EKF34317.1| GTP diphosphokinase [Bacillus sp. HYC-10]
Length = 736
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 167/324 (51%), Gaps = 25/324 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL+MD I+ G L VVE V+++ +++ A L+ ++ +
Sbjct: 55 IQVAGILVDLEMDPSTIAGGFLHDVVEDTDVTLEDLKEHFNEEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP+ +Q IS E ++I
Sbjct: 112 KYKSQEEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ + +D +++ +K
Sbjct: 172 APLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKRKRAEREEYLD----EVVNEVKD 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ + S GR K YS +K++ + E+ D+L +R+++ +
Sbjct: 228 RVSEVNIKAEFS--GRPKHIYSIYRKMVLQNKQFNEIYDLLAVRILVDSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PK N Y+SLH V + G PL E+QIRT
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGD--PL-EVQIRTV 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPE 436
EM +A G A+H YK G + E
Sbjct: 331 EMHEIAEYGIAAHWAYKEGKESAE 354
>gi|418324872|ref|ZP_12936094.1| GTP diphosphokinase [Staphylococcus pettenkoferi VCU012]
gi|365223674|gb|EHM64950.1| GTP diphosphokinase [Staphylococcus pettenkoferi VCU012]
Length = 729
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 170/319 (53%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + V++ A ++ ++K +
Sbjct: 55 IQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFDDVKNIFNEEVAVIVEGVTKLKK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL +R L +PR +Q+ IS E ++I+
Sbjct: 112 KYRSKEEQQAENHRKLFIALAKDVRVILVKLADRLHNVRTLKAMPRDKQVCISKETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I E + + +
Sbjct: 172 APLAHRLGINTIKWELEDTALRYIDSVQYFRIVNLMKKKRSEREAYI----EHAIDHINS 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ +++ GR K YS +K++K + +++ D+L +R+I+ N +N
Sbjct: 228 EMQQMNIQGEIN--GRPKHIYSIYRKMVKQKKQFDQIFDLLAIRIIV----NSIND---- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 278 ---CYAVLGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTV-VGPNGD--PL-EIQIRTY 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM +A +G A+H YK G
Sbjct: 331 EMHEIAEHGVAAHWAYKEG 349
>gi|366085882|ref|ZP_09452367.1| GTP pyrophosphokinase [Lactobacillus zeae KCTC 3804]
Length = 741
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 112/322 (34%), Positives = 167/322 (51%), Gaps = 25/322 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD E +++G L VVE +++ + + G A ++ ++ +
Sbjct: 55 IQVAGILAELKMDPETVASGYLHDVVEDTNITLGDIEEVFGHDVAVIVDGVTKLSKVTYV 114
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ DE A RK L D+R +++ LA RL MR L +L +Q I+ E ++I+
Sbjct: 115 AHK---DELAENHRKMLLAMAKDLRVIMVKLADRLHNMRTLQHLRPDKQRRIANETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + + +ELEDLS RYL P Y + + S T + I E++ +
Sbjct: 172 APLADRLGISTIKWELEDLSLRYLNPQQYYRIAHLMNSKRTEREAYIQEAIEEIKKA--- 228
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
LADL + GR K YS KK+ + +E+ D+L +RVI + +
Sbjct: 229 ---LADLHIKYEIYGRPKHIYSIYKKMRDKHKQFDELYDLLAIRVITETIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKAN Y+S+H V + GK PL E+QIRTE
Sbjct: 278 ---CYAVLGAIHTKWKPMPGRFKDYIAMPKANLYQSIHTTV-IGPMGK--PL-EVQIRTE 330
Query: 413 EMDMLAVNGTASHAFYKGGLTN 434
EM +A G A+H YK G T+
Sbjct: 331 EMHHVAEYGVAAHWAYKEGQTS 352
>gi|256845985|ref|ZP_05551443.1| GTP pyrophosphokinase [Fusobacterium sp. 3_1_36A2]
gi|256719544|gb|EEU33099.1| GTP pyrophosphokinase [Fusobacterium sp. 3_1_36A2]
Length = 724
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 168/320 (52%), Gaps = 33/320 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L D++MD + I AGLL VVE + I ++ G A L+
Sbjct: 50 VEVAKILMDMKMDTDTIVAGLLHDVVEDTLIPIADIKYNFGDTVATLVDGVT-------- 101
Query: 174 KLQVLDDET---AAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVM 229
KL+ L + T A +RK L +IR +++ LA RL MR L ++ +Q IS E +
Sbjct: 102 KLKALPNGTKNQAENIRKMILAMAENIRVILIKLADRLHNMRTLKFMKPEKQQSISKETL 161
Query: 230 KIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQC 289
I+APLAH + + ELEDL+F YL +L + + + + K I+ + +++
Sbjct: 162 DIYAPLAHRLGMAKVKSELEDLAFSYLHHDEFLEIKKLVDNTKEERKDYIENFIRTMIR- 220
Query: 290 LKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTS 349
TL++L V+GR+K YS KK+ + G+ +++ D++G+RVI+ +
Sbjct: 221 -----TLSELGIKAEVKGRFKHFYSIYKKMYQKGKEFDDIYDLMGVRVIVDDKA------ 269
Query: 350 EVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQI 409
CY I+ S + +P R KDYIA PK+N Y+S+H + V GK +EIQI
Sbjct: 270 -----TCYHVLGIVHSQYTPVPGRFKDYIAVPKSNNYQSIHTTI-VGPLGK---FIEIQI 320
Query: 410 RTEEMDMLAVNGTASHAFYK 429
RT++MD +A G A+H YK
Sbjct: 321 RTKDMDKIAEEGIAAHWNYK 340
>gi|397670345|ref|YP_006511880.1| GTP diphosphokinase [Propionibacterium propionicum F0230a]
gi|395142267|gb|AFN46374.1| GTP diphosphokinase [Propionibacterium propionicum F0230a]
Length = 760
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 116/335 (34%), Positives = 171/335 (51%), Gaps = 34/335 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LA+L M V+ A LL VE +++Q+R+ E R+ +
Sbjct: 84 ITHPLAVATILAELGMTEPVLVAALLHDTVEDTEYTLEQLRE-------EFTDEVARMVD 136
Query: 170 NVNLKLQVLDDETAAA--LRKFCL-TYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISL 226
V +V ETA A +RK + T ++R L++ LA RL MR + +L +Q+ I+
Sbjct: 137 GVTKLDKVTYGETAKAETIRKMIMATSEEVRVLVIKLADRLHNMRTIGFLRPDKQVRIAT 196
Query: 227 EVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQL 286
E + I APLAH + N + +ELEDLSF+ + P Y + + G + + Q
Sbjct: 197 ETLNIFAPLAHRLGMNTVKWELEDLSFQAIEPKVYSEIADLVAQQAPGRERYLRDLIAQF 256
Query: 287 LQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLV 346
Q +AD ++ GR K YS +K++ GR ++ D++GLRV++ N+
Sbjct: 257 KQL------MADNKIKATIYGRPKHFYSIYQKMMVRGRDFADIYDLIGLRVLV---DNV- 306
Query: 347 NTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLME 406
R CY + S WK +P R KDYIA PK N Y+SLH V + D G+ +E
Sbjct: 307 -------RDCYGVLGVAHSKWKPIPGRFKDYIANPKFNMYQSLHTTV-LGDRGEP---VE 355
Query: 407 IQIRTEEMDMLAVNGTASHAFYKGGLTN---PEEA 438
+QIRT EM A G A+H YK L N PEEA
Sbjct: 356 LQIRTHEMHRRAEYGVAAHWKYKENLRNGVTPEEA 390
>gi|348617962|ref|ZP_08884495.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Candidatus Glomeribacter gigasporarum BEG34]
gi|347816667|emb|CCD29151.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Candidatus Glomeribacter gigasporarum BEG34]
Length = 749
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/322 (31%), Positives = 166/322 (51%), Gaps = 25/322 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA + A +DA+ I A LL V+E V+ +++ R G A L+ ++
Sbjct: 77 ITHPLAVAEICAHWHLDAQPIMAALLHDVIEDQDVTKEELAGRFGAKVAELVDGVSKLDK 136
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++L+ D A RK L D+R +++ LA RL MR L +P ++L ++ E
Sbjct: 137 ---VELRRCKDAQAENFRKMMLAMARDVRVMLVKLADRLHNMRTLGAVPEAKRLRVARET 193
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+AP+AH + N EL+D SF +L+P+ Y ++ +R+ +I ++L+
Sbjct: 194 LDIYAPIAHRLGLNAAYLELQDASFAHLYPYRYATLEKAVRAARGNRCEVI----RKVLE 249
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+K + A + D V GR K+ YS KK+ R +V DV G+R+++K
Sbjct: 250 AVKQALSSAQI--DCEVTGREKTIYSIYKKMRDKQRSFSQVLDVYGVRIVVKAPLE---- 303
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P + KDYIA PK NGY+SLH + V G +E Q
Sbjct: 304 -------CYLCMGALHALYKPVPGKIKDYIAVPKINGYQSLHTTL-VGPFGMP---IEFQ 352
Query: 409 IRTEEMDMLAVNGTASHAFYKG 430
+RT +M +A G A+H YKG
Sbjct: 353 LRTRKMHAIAEAGVAAHWIYKG 374
>gi|239618318|ref|YP_002941640.1| (p)ppGpp synthetase I, SpoT/RelA [Kosmotoga olearia TBF 19.5.1]
gi|239507149|gb|ACR80636.1| (p)ppGpp synthetase I, SpoT/RelA [Kosmotoga olearia TBF 19.5.1]
Length = 726
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 105/330 (31%), Positives = 176/330 (53%), Gaps = 29/330 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ ++V +LA+LQ D + + +GLL VVE V ++ V +R G A ++ ++ N
Sbjct: 55 ISHPVAVTKILAELQADTDTLVSGLLHDVVEDCNVPLEDVENRFGPIVAKIVDGVTKI-N 113
Query: 170 NVNL-----KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLM 223
N+ L K ++ +RK L D R +I+ LA RL MR L ++ ++
Sbjct: 114 NLKLSETLDKAEIKSRIKIETIRKMLLALSSDPRIIIVKLADRLHNMRTLYFVKNDKKRK 173
Query: 224 -ISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIY 282
+LE + I+AP+AH + + + +ELEDLSF+YL+P Y + ++ + +D Y
Sbjct: 174 DKALETLNIYAPIAHRIGIHRIKWELEDLSFKYLYPNDYNELKLRVKKKLHERQATMDEY 233
Query: 283 KEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPS 342
+ + L+ + ++GR K YS +K+++ + +E+ D++ LR+I +
Sbjct: 234 RNIVANELRKHRV------NFLIEGRVKHLYSIWQKMIRKNKSFDEIYDLIALRIITE-- 285
Query: 343 SNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTR 402
E +CY I+ SLW +P R KDYIA PK+NGY+SLH + ++ G+
Sbjct: 286 ---------DEVSCYKILGIVHSLWPPVPGRFKDYIAAPKSNGYKSLHTTL-ITHKGE-- 333
Query: 403 PLMEIQIRTEEMDMLAVNGTASHAFYKGGL 432
PL EIQIR+E+M A G A+H YK G+
Sbjct: 334 PL-EIQIRSEKMHKEAEFGLAAHWIYKEGI 362
>gi|47566596|ref|ZP_00237418.1| GTP pyrophosphokinase [Bacillus cereus G9241]
gi|118479564|ref|YP_896715.1| GTP diphosphokinase [Bacillus thuringiensis str. Al Hakam]
gi|196034529|ref|ZP_03101938.1| GTP diphosphokinase [Bacillus cereus W]
gi|196039332|ref|ZP_03106638.1| GTP diphosphokinase [Bacillus cereus NVH0597-99]
gi|196044908|ref|ZP_03112142.1| GTP diphosphokinase [Bacillus cereus 03BB108]
gi|206975952|ref|ZP_03236862.1| GTP diphosphokinase [Bacillus cereus H3081.97]
gi|217961898|ref|YP_002340468.1| GTP diphosphokinase [Bacillus cereus AH187]
gi|218905602|ref|YP_002453436.1| GTP diphosphokinase [Bacillus cereus AH820]
gi|222097852|ref|YP_002531909.1| gtp diphosphokinase (gtp pyrophosphokinase) [Bacillus cereus Q1]
gi|225866388|ref|YP_002751766.1| GTP diphosphokinase [Bacillus cereus 03BB102]
gi|228917043|ref|ZP_04080603.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228929452|ref|ZP_04092473.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228935727|ref|ZP_04098540.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228948121|ref|ZP_04110405.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229093478|ref|ZP_04224581.1| GTP pyrophosphokinase [Bacillus cereus Rock3-42]
gi|229123948|ref|ZP_04253140.1| GTP pyrophosphokinase [Bacillus cereus 95/8201]
gi|229141146|ref|ZP_04269687.1| GTP pyrophosphokinase [Bacillus cereus BDRD-ST26]
gi|229158022|ref|ZP_04286093.1| GTP pyrophosphokinase [Bacillus cereus ATCC 4342]
gi|229198534|ref|ZP_04325238.1| GTP pyrophosphokinase [Bacillus cereus m1293]
gi|254724667|ref|ZP_05186450.1| GTP diphosphokinase (GTP pyrophosphokinase) [Bacillus anthracis
str. A1055]
gi|375286411|ref|YP_005106850.1| GTP pyrophosphokinase [Bacillus cereus NC7401]
gi|376268304|ref|YP_005121016.1| GTP pyrophosphokinase [Bacillus cereus F837/76]
gi|423354899|ref|ZP_17332524.1| GTP pyrophosphokinase [Bacillus cereus IS075]
gi|423373632|ref|ZP_17350971.1| GTP pyrophosphokinase [Bacillus cereus AND1407]
gi|423549853|ref|ZP_17526180.1| GTP pyrophosphokinase [Bacillus cereus ISP3191]
gi|423570646|ref|ZP_17546891.1| GTP pyrophosphokinase [Bacillus cereus MSX-A12]
gi|423573914|ref|ZP_17550033.1| GTP pyrophosphokinase [Bacillus cereus MSX-D12]
gi|423603933|ref|ZP_17579826.1| GTP pyrophosphokinase [Bacillus cereus VD102]
gi|47556626|gb|EAL14958.1| GTP pyrophosphokinase [Bacillus cereus G9241]
gi|118418789|gb|ABK87208.1| GTP diphosphokinase [Bacillus thuringiensis str. Al Hakam]
gi|195993071|gb|EDX57030.1| GTP diphosphokinase [Bacillus cereus W]
gi|196024396|gb|EDX63069.1| GTP diphosphokinase [Bacillus cereus 03BB108]
gi|196029959|gb|EDX68560.1| GTP diphosphokinase [Bacillus cereus NVH0597-99]
gi|206745704|gb|EDZ57101.1| GTP diphosphokinase [Bacillus cereus H3081.97]
gi|217066579|gb|ACJ80829.1| GTP diphosphokinase [Bacillus cereus AH187]
gi|218537532|gb|ACK89930.1| GTP diphosphokinase [Bacillus cereus AH820]
gi|221241910|gb|ACM14620.1| GTP diphosphokinase (GTP pyrophosphokinase) [Bacillus cereus Q1]
gi|225788454|gb|ACO28671.1| GTP diphosphokinase [Bacillus cereus 03BB102]
gi|228585037|gb|EEK43151.1| GTP pyrophosphokinase [Bacillus cereus m1293]
gi|228625475|gb|EEK82231.1| GTP pyrophosphokinase [Bacillus cereus ATCC 4342]
gi|228642309|gb|EEK98599.1| GTP pyrophosphokinase [Bacillus cereus BDRD-ST26]
gi|228659250|gb|EEL14898.1| GTP pyrophosphokinase [Bacillus cereus 95/8201]
gi|228689949|gb|EEL43753.1| GTP pyrophosphokinase [Bacillus cereus Rock3-42]
gi|228811479|gb|EEM57816.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228823965|gb|EEM69784.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228830240|gb|EEM75856.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228842650|gb|EEM87738.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|358354938|dbj|BAL20110.1| GTP pyrophosphokinase [Bacillus cereus NC7401]
gi|364514104|gb|AEW57503.1| GTP pyrophosphokinase [Bacillus cereus F837/76]
gi|401085783|gb|EJP94019.1| GTP pyrophosphokinase [Bacillus cereus IS075]
gi|401095836|gb|EJQ03889.1| GTP pyrophosphokinase [Bacillus cereus AND1407]
gi|401189469|gb|EJQ96519.1| GTP pyrophosphokinase [Bacillus cereus ISP3191]
gi|401203557|gb|EJR10394.1| GTP pyrophosphokinase [Bacillus cereus MSX-A12]
gi|401212483|gb|EJR19226.1| GTP pyrophosphokinase [Bacillus cereus MSX-D12]
gi|401245619|gb|EJR51972.1| GTP pyrophosphokinase [Bacillus cereus VD102]
Length = 727
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 163/321 (50%), Gaps = 25/321 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD +SAG L VVE ++++ + A L+ ++ +
Sbjct: 55 IQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP+ +Q I+ E ++I
Sbjct: 112 KYKSHEQQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED S RYL P Y + ++ + +D +++ ++
Sbjct: 172 APLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLD----EVMTGIR- 226
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
L ++ + GR K YS +K+ + E+ D+L +RV++ +
Sbjct: 227 -EKLDEVAIQPEISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+QIRT+
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTV-IGPKGD--PL-EVQIRTK 330
Query: 413 EMDMLAVNGTASHAFYKGGLT 433
EM +A G A+H YK G T
Sbjct: 331 EMHEIAEFGIAAHWAYKEGKT 351
>gi|418070749|ref|ZP_12708024.1| GTP pyrophosphokinase [Lactobacillus rhamnosus R0011]
gi|357540169|gb|EHJ24186.1| GTP pyrophosphokinase [Lactobacillus rhamnosus R0011]
Length = 741
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 112/322 (34%), Positives = 167/322 (51%), Gaps = 25/322 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD E +++G L VVE +++ + + G A ++ ++ +
Sbjct: 55 IQVAGILAELKMDPETVASGYLHDVVEDKNITLGDIEEVFGHDVAVIVDGVTKLSKVTYV 114
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ DE A RK L D+R +++ LA RL MR L +L +Q I+ E ++I+
Sbjct: 115 AHK---DELAENHRKMLLAMAKDLRVIMVKLADRLHNMRTLQHLRPDKQRRIANETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + + +ELEDLS RYL P Y + + S T + I E++ +
Sbjct: 172 APLADRLGISTIKWELEDLSLRYLNPQQYYRIAHLMNSKRTEREAYIQEAIEEIKKA--- 228
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
LADL + GR K YS KK+ + +E+ D+L +RVI + +
Sbjct: 229 ---LADLHIKYEIYGRPKHIYSIYKKMRDKHKQFDELYDLLAIRVITETIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKAN Y+S+H V + GK PL E+QIRTE
Sbjct: 278 ---CYAVLGAIHTKWKPMPGRFKDYIAMPKANLYQSIHTTV-IGPMGK--PL-EVQIRTE 330
Query: 413 EMDMLAVNGTASHAFYKGGLTN 434
EM +A G A+H YK G T+
Sbjct: 331 EMHHVAEYGVAAHWAYKEGQTS 352
>gi|229186646|ref|ZP_04313807.1| GTP pyrophosphokinase [Bacillus cereus BGSC 6E1]
gi|228596905|gb|EEK54564.1| GTP pyrophosphokinase [Bacillus cereus BGSC 6E1]
Length = 727
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 163/321 (50%), Gaps = 25/321 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD +SAG L VVE ++++ + A L+ ++ +
Sbjct: 55 IQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP+ +Q I+ E ++I
Sbjct: 112 KYKSHEQQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED S RYL P Y + ++ + +D +++ ++
Sbjct: 172 APLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLD----EVMTGIR- 226
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
L ++ + GR K YS +K+ + E+ D+L +RV++ +
Sbjct: 227 -EKLDEVAIQPEISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+QIRT+
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTV-IGPKGD--PL-EVQIRTK 330
Query: 413 EMDMLAVNGTASHAFYKGGLT 433
EM +A G A+H YK G T
Sbjct: 331 EMHEIAEFGIAAHWAYKEGKT 351
>gi|423452296|ref|ZP_17429149.1| GTP pyrophosphokinase [Bacillus cereus BAG5X1-1]
gi|423470622|ref|ZP_17447366.1| GTP pyrophosphokinase [Bacillus cereus BAG6O-2]
gi|401139934|gb|EJQ47491.1| GTP pyrophosphokinase [Bacillus cereus BAG5X1-1]
gi|402436288|gb|EJV68320.1| GTP pyrophosphokinase [Bacillus cereus BAG6O-2]
Length = 727
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 109/323 (33%), Positives = 162/323 (50%), Gaps = 33/323 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD +SAG L VVE ++++ + A L+ ++ +
Sbjct: 55 IQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP+ +Q I+ E ++I
Sbjct: 112 KYKSHEQQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED S RYL P Y + ++ + +D + + LK
Sbjct: 172 APLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVMTGIREKLK- 230
Query: 293 DATLADLVEDVSVQ----GRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+VS+Q GR K YS +K+ + E+ D+L +RV++ +
Sbjct: 231 ---------EVSIQPEISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKD---- 277
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+Q
Sbjct: 278 -------CYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTV-IGPKGD--PL-EVQ 326
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IRT+EM +A G A+H YK G
Sbjct: 327 IRTKEMHEIAEFGIAAHWAYKEG 349
>gi|301055915|ref|YP_003794126.1| GTP diphosphokinase [Bacillus cereus biovar anthracis str. CI]
gi|300378084|gb|ADK06988.1| GTP diphosphokinase [Bacillus cereus biovar anthracis str. CI]
Length = 727
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 163/321 (50%), Gaps = 25/321 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD +SAG L VVE ++++ + A L+ ++ +
Sbjct: 55 IQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP+ +Q I+ E ++I
Sbjct: 112 KYKSHEQQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED S RYL P Y + ++ + +D +++ ++
Sbjct: 172 APLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLD----EVMTGIR- 226
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
L ++ + GR K YS +K+ + E+ D+L +RV++ +
Sbjct: 227 -EKLDEVAIQPEISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+QIRT+
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTV-IGPKGD--PL-EVQIRTK 330
Query: 413 EMDMLAVNGTASHAFYKGGLT 433
EM +A G A+H YK G T
Sbjct: 331 EMHEIAEFGIAAHWAYKEGKT 351
>gi|433463434|ref|ZP_20420988.1| GTP pyrophosphokinase [Halobacillus sp. BAB-2008]
gi|432187529|gb|ELK44809.1| GTP pyrophosphokinase [Halobacillus sp. BAB-2008]
Length = 734
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 167/323 (51%), Gaps = 33/323 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L +L+MD E ++ G L VVE ++++++ D A L+ ++ +
Sbjct: 55 IQVAGILVNLEMDPETVAGGFLHDVVEDTDITLEEIGDAFNTEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP +Q IS E ++I
Sbjct: 112 KYKSKEAQQAENHRKMFVAMAKDIRVILIKLADRLHNMRTLKHLPAEKQRRISNETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ + Y E+++ ++T
Sbjct: 172 APLAHRLGISTIKWELEDTALRYLNPQQYYRIVHLMKQKRNEREH----YIEEVINEIQT 227
Query: 293 DATLADLVEDVSVQ----GRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
++DV++Q GR K YS +K++ + E+ D+L +R+ ++ +
Sbjct: 228 Q------LDDVNIQADLNGRPKHLYSIYRKMVLQNKQFNEIYDLLAVRITVESIKD---- 277
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY II + WK MP R KDYIA PK N Y+SLH V + G PL E+Q
Sbjct: 278 -------CYAVLGIIHTCWKPMPGRFKDYIAMPKPNLYQSLHTTV-IGPKGD--PL-EVQ 326
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IRT +M +A G A+H YK G
Sbjct: 327 IRTHDMHEIAEYGIAAHWAYKEG 349
>gi|49481489|ref|YP_038457.1| GTP diphosphokinase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|228987658|ref|ZP_04147772.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|49333045|gb|AAT63691.1| GTP diphosphokinase (GTP pyrophosphokinase) [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|228772118|gb|EEM20570.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
Length = 727
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 163/321 (50%), Gaps = 25/321 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD +SAG L VVE ++++ + A L+ ++ +
Sbjct: 55 IQVAGILVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP+ +Q I+ E ++I
Sbjct: 112 KYKSHEQQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED S RYL P Y + ++ + +D +++ ++
Sbjct: 172 APLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLD----EVMTGIR- 226
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
L ++ + GR K YS +K+ + E+ D+L +RV++ +
Sbjct: 227 -EKLDEVAIQPEISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+QIRT+
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTV-IGPKGD--PL-EVQIRTK 330
Query: 413 EMDMLAVNGTASHAFYKGGLT 433
EM +A G A+H YK G T
Sbjct: 331 EMHEIAEFGIAAHWAYKEGKT 351
>gi|126653971|ref|ZP_01725808.1| GTP pyrophosphokinase [Bacillus sp. B14905]
gi|126589528|gb|EAZ83670.1| GTP pyrophosphokinase [Bacillus sp. B14905]
Length = 731
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 161/321 (50%), Gaps = 29/321 (9%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+LQMD E ++AG L VVE + + G A L+ ++
Sbjct: 55 VQVAGILAELQMDPETVAAGFLHDVVEDTDFTRDDLVREFGEEVAVLVDGVTKLG----- 109
Query: 174 KLQVLDDETAAA---LRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMK 230
K++ L E A + F DIR +++ LA RL MR L +LP +Q IS E ++
Sbjct: 110 KIKYLSKEAQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPAEKQRRISKETLE 169
Query: 231 IHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCL 290
I APLAH + + + +ELED + RYL P Y + + ++ + +D ++ +
Sbjct: 170 IFAPLAHRLGISTVKWELEDTALRYLNPQQYYRIVSLMKKKRDEREAYLD----NVMAEM 225
Query: 291 KTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSE 350
K+ ++ D V GR K YS +K++ + E+ D+L +RV++ +
Sbjct: 226 KSQLNEVEI--DADVYGRPKHIYSIYRKMVLQKKQFNEIYDLLAIRVLVDSIKD------ 277
Query: 351 VGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIR 410
CY I+ +LWK MP R KDYIA PK N Y+SLH V G +E+QIR
Sbjct: 278 -----CYAVLGIVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV----IGPYGDPLEVQIR 328
Query: 411 TEEMDMLAVNGTASHAFYKGG 431
T+EM +A G A+H YK G
Sbjct: 329 TKEMHKIAEYGIAAHWAYKEG 349
>gi|50954753|ref|YP_062041.1| GTP pyrophosphokinase [Leifsonia xyli subsp. xyli str. CTCB07]
gi|50951235|gb|AAT88936.1| GTP pyrophosphokinase [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 758
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 167/321 (52%), Gaps = 27/321 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++VA ++ADL + A+ I+A LL VE ++ +VRD+ G A L+ ++
Sbjct: 80 ITHPVAVAQIIADLGVGAKTIAAALLHDTVEDTDYTLDEVRDQFGGEIAMLVDGVTKLD- 138
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
K++ D A +RK + DIR LI+ LA RL R ++P + E
Sbjct: 139 ----KVKYGDSAQAETVRKMIVAMSKDIRVLIVKLADRLHNARTWGFVPAANAARKATET 194
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+APLAH + + +ELEDLSF L P Y+ +++ ++ + L+ +Q++
Sbjct: 195 LEIYAPLAHRLGIQAIKWELEDLSFAVLHPKLYVEIESLVKQRTPERERLV----QQVID 250
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ D A + V GR K YS +K++ GR +++ D++G+RV LV T
Sbjct: 251 AINDDLKSARIRGKVV--GRPKQYYSIYQKMVVRGREFDDIYDLVGIRV-------LVTT 301
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY I + W MP R KDYIA PK N Y+SLH V + G RP+ EIQ
Sbjct: 302 V----RDCYAVLGQIHARWTPMPGRFKDYIATPKFNLYQSLHTTV-IGPQG--RPV-EIQ 353
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRTEEM A G A+H YK
Sbjct: 354 IRTEEMHQRAEFGVAAHWKYK 374
>gi|421749514|ref|ZP_16186941.1| bifunctional (p)ppGpp synthetase II/guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase, partial
[Cupriavidus necator HPC(L)]
gi|409771617|gb|EKN53859.1| bifunctional (p)ppGpp synthetase II/guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase, partial
[Cupriavidus necator HPC(L)]
Length = 775
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 191/384 (49%), Gaps = 32/384 (8%)
Query: 48 SPAPLPSTAGEKMVVKLVGAFNELTERMNVLSSSSSRLLFKALKLSIPMLQSLPLSPDSR 107
P P+ + V+ + G L E++ L + L+ +A + S L S
Sbjct: 42 GPTSQPAVPPRQQVISISG----LMEKLGYLKPADQALVREAFQFSDEA--HLGQYRQSG 95
Query: 108 SP-LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLR 166
P +T ++VA L A+ ++DA+ I A LL V+E G++ ++ ++ G A L+ +
Sbjct: 96 EPYITHPVAVAELCAEWKLDAQSIMAALLHDVIEDQGITKSELAEKFGPKVAELVDGLTK 155
Query: 167 VKNNVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMIS 225
+ L+ Q + A + RK L D+R +++ LA R MR LD++P ++ I+
Sbjct: 156 LDK---LEFQSREQAQAESFRKMLLAMARDVRVILVKLADRTHNMRTLDFVPPEKRRRIA 212
Query: 226 LEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQ 285
LE M+I+AP+AH + N EL++LSF+ PF Y ++ +++ + ++ +
Sbjct: 213 LETMEIYAPIAHRLGLNSTYRELQELSFKVGSPFRYATLEKAVKAARGNRREVVS----R 268
Query: 286 LLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNL 345
+L+ ++ A +V ++S GR K+ YS +K+ +V DV G RV+++ +
Sbjct: 269 ILEAAQSALANAGIVAELS--GREKTLYSIYRKMHDKQLSFSQVLDVYGFRVVVETQMH- 325
Query: 346 VNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLM 405
CY + L+K MP + KDYIA PK NGY+SLH + G +
Sbjct: 326 ----------CYMALGALHGLYKPMPGKFKDYIAIPKINGYQSLHTTL----VGPFGTPV 371
Query: 406 EIQIRTEEMDMLAVNGTASHAFYK 429
E QIRT EM +A G A+H YK
Sbjct: 372 EFQIRTREMHQIAEAGVAAHWMYK 395
>gi|199599338|ref|ZP_03212736.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus rhamnosus HN001]
gi|258508564|ref|YP_003171315.1| GTP pyrophosphokinase [Lactobacillus rhamnosus GG]
gi|385828226|ref|YP_005865998.1| GTP pyrophosphokinase [Lactobacillus rhamnosus GG]
gi|385835394|ref|YP_005873168.1| relA/SpoT family protein [Lactobacillus rhamnosus ATCC 8530]
gi|421768716|ref|ZP_16205426.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Lactobacillus
rhamnosus LRHMDP2]
gi|421771132|ref|ZP_16207793.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Lactobacillus
rhamnosus LRHMDP3]
gi|199589777|gb|EDY97885.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus rhamnosus HN001]
gi|257148491|emb|CAR87464.1| GTP pyrophosphokinase [Lactobacillus rhamnosus GG]
gi|259649871|dbj|BAI42033.1| GTP pyrophosphokinase [Lactobacillus rhamnosus GG]
gi|355394885|gb|AER64315.1| relA/SpoT family protein [Lactobacillus rhamnosus ATCC 8530]
gi|411185565|gb|EKS52692.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Lactobacillus
rhamnosus LRHMDP2]
gi|411186567|gb|EKS53691.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Lactobacillus
rhamnosus LRHMDP3]
Length = 741
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 112/322 (34%), Positives = 167/322 (51%), Gaps = 25/322 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD E +++G L VVE +++ + + G A ++ ++ +
Sbjct: 55 IQVAGILAELKMDPETVASGYLHDVVEDTNITLGDIEEVFGHDVAVIVDGVTKLSKVTYV 114
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ DE A RK L D+R +++ LA RL MR L +L +Q I+ E ++I+
Sbjct: 115 AHK---DELAENHRKMLLAMAKDLRVIMVKLADRLHNMRTLQHLRPDKQRRIANETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + + +ELEDLS RYL P Y + + S T + I E++ +
Sbjct: 172 APLADRLGISTIKWELEDLSLRYLNPQQYYRIAHLMNSKRTEREAYIQEAIEEIKKA--- 228
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
LADL + GR K YS KK+ + +E+ D+L +RVI + +
Sbjct: 229 ---LADLHIKYEIYGRPKHIYSIYKKMRDKHKQFDELYDLLAIRVITETIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKAN Y+S+H V + GK PL E+QIRTE
Sbjct: 278 ---CYAVLGAIHTKWKPMPGRFKDYIAMPKANLYQSIHTTV-IGPMGK--PL-EVQIRTE 330
Query: 413 EMDMLAVNGTASHAFYKGGLTN 434
EM +A G A+H YK G T+
Sbjct: 331 EMHHVAEYGVAAHWAYKEGQTS 352
>gi|169829352|ref|YP_001699510.1| GTP pyrophosphokinase [Lysinibacillus sphaericus C3-41]
gi|168993840|gb|ACA41380.1| GTP pyrophosphokinase [Lysinibacillus sphaericus C3-41]
Length = 731
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 161/321 (50%), Gaps = 29/321 (9%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+LQMD E ++AG L VVE + + G A L+ ++
Sbjct: 55 VQVAGILAELQMDPETVAAGFLHDVVEDTDFTRDDLVREFGEEVAVLVDGVTKLG----- 109
Query: 174 KLQVLDDETAAA---LRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMK 230
K++ L E A + F DIR +++ LA RL MR L +LP +Q IS E ++
Sbjct: 110 KIKYLSKEAQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPAEKQRRISKETLE 169
Query: 231 IHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCL 290
I APLAH + + + +ELED + RYL P Y + + ++ + +D ++ +
Sbjct: 170 IFAPLAHRLGISTVKWELEDTALRYLNPQQYYRIVSLMKKKRDEREAYLD----NVMAEM 225
Query: 291 KTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSE 350
K+ ++ D V GR K YS +K++ + E+ D+L +RV++ +
Sbjct: 226 KSQLNEVEI--DADVYGRPKHIYSIYRKMVLQKKQFNEIYDLLAIRVLVDSIKD------ 277
Query: 351 VGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIR 410
CY I+ +LWK MP R KDYIA PK N Y+SLH V G +E+QIR
Sbjct: 278 -----CYAVLGIVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV----IGPYGDPLEVQIR 328
Query: 411 TEEMDMLAVNGTASHAFYKGG 431
T+EM +A G A+H YK G
Sbjct: 329 TKEMHKIAEYGIAAHWAYKEG 349
>gi|15675772|ref|NP_269946.1| (p)ppGpp synthetase [Streptococcus pyogenes SF370]
gi|13622996|gb|AAK34667.1| (p)ppGpp synthetase [Streptococcus pyogenes M1 GAS]
Length = 743
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 104/328 (31%), Positives = 171/328 (52%), Gaps = 34/328 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +LADL +DA ++ G L VVE +++ ++ G H++ + +
Sbjct: 55 IVHPIQVAGILADLHLDAVTVACGFLHDVVEDTDITLDEIEADFG-------HDARDIVD 107
Query: 170 NVN----LKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMI 224
V ++ + +++ A RK + DIR +++ LA RL MR L +L + +Q I
Sbjct: 108 GVTKLGEVEYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERI 167
Query: 225 SLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKE 284
S E M+I+APLAH + + + +ELEDL+FRYL + + ++ + L+ E
Sbjct: 168 SRETMEIYAPLAHRLGISRIKWELEDLAFRYLNETEFYKISHMMKEKRREREALV----E 223
Query: 285 QLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSN 344
++ +KT T L D V GR K YS +K+ + +++ D++ +R +++ S+
Sbjct: 224 AIVSKVKTYTTQQGLFGD--VYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCVMETQSD 281
Query: 345 LVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPL 404
+ Y I LW+ MP R KDYIA PKANGY+S+H V G P+
Sbjct: 282 V-----------YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI 326
Query: 405 MEIQIRTEEMDMLAVNGTASHAFYKGGL 432
EIQIRT++M +A G A+H YK G+
Sbjct: 327 -EIQIRTKDMHQVAEYGVAAHWAYKKGV 353
>gi|406658950|ref|ZP_11067090.1| GTP diphosphokinase [Streptococcus iniae 9117]
gi|405579165|gb|EKB53279.1| GTP diphosphokinase [Streptococcus iniae 9117]
Length = 739
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 179/364 (49%), Gaps = 28/364 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL +DA ++ G L VVE +++ + G ++ ++ +
Sbjct: 55 IQVAGILADLHLDAVTVACGFLHDVVEDTDITLADIETDFGKDVRDIIDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E M+I+
Sbjct: 112 EYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELEDLSFRYL + + + + L+D ++++
Sbjct: 172 APLAHRLGISRIKWELEDLSFRYLNETEFYRISHLMTEKRREREALVDEIVDKIMTYTNE 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 232 QGLYGD------VYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCVMETQSDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQIRT+
Sbjct: 279 ----YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQIRTK 329
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFEFDWR 472
EM +A G A+H YK G+ K M EL + L+D + + K F +
Sbjct: 330 EMHQVAEYGVAAHWAYKKGIKGKVNQDDQKVGMNWINEL--VELQDASNGDAKDFVNSVK 387
Query: 473 DRVF 476
+ +F
Sbjct: 388 EEIF 391
>gi|302803634|ref|XP_002983570.1| hypothetical protein SELMODRAFT_118606 [Selaginella moellendorffii]
gi|300148813|gb|EFJ15471.1| hypothetical protein SELMODRAFT_118606 [Selaginella moellendorffii]
Length = 540
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 112/330 (33%), Positives = 166/330 (50%), Gaps = 35/330 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIG-------IGTAHLLH 162
LT + A+LLA +A V++AGLL ++ + Q+R G +G + +
Sbjct: 41 LTHCVETAILLASAGAEATVVAAGLLHDTLDDSSIDEAQIRAIFGDDVADLVVGVSKISQ 100
Query: 163 ESLRVKNNVNLKLQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQL 222
S ++N N+ + L+ A LR L D+R +++ LA RL MR L+ L +Q
Sbjct: 101 LSQLARDN-NIASKTLE---AGRLRTMFLAMVDVRVVLIKLADRLHNMRTLEALATEKQN 156
Query: 223 MISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIY 282
I+ E ++I P+A+ + E+EDL F+YL P Y + L G L I
Sbjct: 157 RIASETLEILVPIANRLGIWSWKAEMEDLCFKYLNPTEYQELAAKLIECCRGGVVLSAI- 215
Query: 283 KEQLLQCL-KTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKP 341
EQL + L K+ + DL GR K+ +S K+ K GR +E+ DV GLR+I+K
Sbjct: 216 -EQLDKALRKSKIKIEDLC------GRSKTLFSIYTKMKKKGRSIDEIYDVRGLRLIVKD 268
Query: 342 SSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKT 401
++ CY E + LW +P + KDYI +PKANGY+SLH V +GK
Sbjct: 269 EAD-----------CYKALEFVHKLWDHIPGKLKDYIKQPKANGYQSLHTVV----SGKD 313
Query: 402 RPLMEIQIRTEEMDMLAVNGTASHAFYKGG 431
+E+QIRT+EM A G A+H YK G
Sbjct: 314 GLPLEVQIRTKEMHSHAEFGMAAHWRYKEG 343
>gi|146296035|ref|YP_001179806.1| (p)ppGpp synthetase I SpoT/RelA [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409611|gb|ABP66615.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 722
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 111/327 (33%), Positives = 164/327 (50%), Gaps = 32/327 (9%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ L VAL+LADL++D I AGLL VVE S Q++ G A L+ ++
Sbjct: 47 IVHPLEVALILADLELDIASIVAGLLHDVVEDTSASPQEIEQEFGGEIASLVDGVTKLGK 106
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+ ++ A RK + DIR +++ LA RL MR L YLP +Q + E
Sbjct: 107 ---LEFTSKLEQQAENYRKMLIAMAKDIRVILIKLADRLHNMRTLKYLPPEKQRQKAQET 163
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYL-FVDTWLRS---HETGSKPLIDIYKE 284
+ I+APLAH + + + +ELEDL+ RYL P Y V+ + E + +I++ E
Sbjct: 164 IDIYAPLAHRLGISKIKWELEDLALRYLDPEGYYDLVEKIAKKRVEREEYIQRIINLISE 223
Query: 285 QLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSN 344
+L + +E + GR K YS +K+ + G+ EE+ D+ +R+I+ +
Sbjct: 224 KLKEA---------NIEVGQIDGRPKHFYSIYRKMKQQGKTLEEIYDLFAIRIIVNSVKD 274
Query: 345 LVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPL 404
CY II +L+K MP R KDYIA PK N Y+SLH V + G+
Sbjct: 275 -----------CYGVLGIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPEGEP--- 319
Query: 405 MEIQIRTEEMDMLAVNGTASHAFYKGG 431
E+QIRT +M A G A+H YK G
Sbjct: 320 FEVQIRTFDMHRTAEYGIAAHWKYKEG 346
>gi|422758190|ref|ZP_16811952.1| GTP pyrophosphokinase / guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Streptococcus dysgalactiae
subsp. dysgalactiae ATCC 27957]
gi|322411025|gb|EFY01933.1| GTP pyrophosphokinase / guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Streptococcus dysgalactiae
subsp. dysgalactiae ATCC 27957]
Length = 739
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 174/347 (50%), Gaps = 26/347 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +LADL +DA ++ G L VVE +++ + G ++ ++
Sbjct: 51 IVHPIQVAGILADLHLDAVTVACGFLHDVVEDTDITLDNIEFDFGKDVRDIVDGVTKLGK 110
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ + +++ A RK + DIR +++ L+ RL MR L +L + +Q IS E
Sbjct: 111 ---VEYKSHEEQLAENHRKMLMAMSKDIRVILVKLSDRLHNMRTLKHLRKDKQERISRET 167
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLAH + + + +ELEDLSFRYL + + ++ + L+D ++
Sbjct: 168 MEIYAPLAHRLGISRIKWELEDLSFRYLNETEFYKISHMMKEKRREREALVD----DIVT 223
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+K+ T L D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 224 KIKSYTTEQGLFGD--VYGRPKHIYSVYRKMRDKKKRFDQIFDLIAIRCVMETQSDV--- 278
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQ
Sbjct: 279 --------YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQ 325
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALR 455
IRT+EM +A G A+H YK GL K M EL L+
Sbjct: 326 IRTKEMHQVAEYGVAAHWAYKKGLRGKVNQAEQKVGMNWIKELVELQ 372
>gi|94989319|ref|YP_597420.1| GTP pyrophosphokinase [Streptococcus pyogenes MGAS9429]
gi|94993206|ref|YP_601305.1| GTP pyrophosphokinase / guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Streptococcus pyogenes
MGAS2096]
gi|94542827|gb|ABF32876.1| GTP pyrophosphokinase [Streptococcus pyogenes MGAS9429]
gi|94546714|gb|ABF36761.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Streptococcus pyogenes
MGAS2096]
Length = 743
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 104/328 (31%), Positives = 171/328 (52%), Gaps = 34/328 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +LADL +DA ++ G L VVE +++ ++ G H++ + +
Sbjct: 55 IVHPIQVAGILADLHLDAVTVACGFLHDVVEDTDITLDEIEADFG-------HDARDIVD 107
Query: 170 NVN----LKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMI 224
V ++ + +++ A RK + DIR +++ LA RL MR L +L + +Q I
Sbjct: 108 GVTKLGKVEYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERI 167
Query: 225 SLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKE 284
S E M+I+APLAH + + + +ELEDL+FRYL + + ++ + L+ E
Sbjct: 168 SRETMEIYAPLAHRLGISRIKWELEDLAFRYLNETEFYKISHMMKEKRREREALV----E 223
Query: 285 QLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSN 344
++ +KT T L D V GR K YS +K+ + +++ D++ +R +++ S+
Sbjct: 224 AIVSKVKTYTTQQGLFGD--VYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCVMETQSD 281
Query: 345 LVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPL 404
+ Y I LW+ MP R KDYIA PKANGY+S+H V G P+
Sbjct: 282 V-----------YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI 326
Query: 405 MEIQIRTEEMDMLAVNGTASHAFYKGGL 432
EIQIRT++M +A G A+H YK G+
Sbjct: 327 -EIQIRTKDMHQVAEYGVAAHWAYKKGV 353
>gi|443469722|ref|ZP_21059876.1| GTP pyrophosphokinase [Pseudomonas pseudoalcaligenes KF707]
gi|442899174|gb|ELS25705.1| GTP pyrophosphokinase [Pseudomonas pseudoalcaligenes KF707]
Length = 748
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 108/332 (32%), Positives = 165/332 (49%), Gaps = 27/332 (8%)
Query: 105 DSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHES 164
+ S L +A +LADL++D E + A ++ + V G + +Q V+ R G A L+
Sbjct: 60 EGTSSFQTGLEIAEILADLKLDQESLVAAVIYRGVREGKIQLQAVQQRFGAVVAKLIEGV 119
Query: 165 LR---VKNNVNLKLQVLDDETAAA--LRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPR 218
LR + ++N + ++ A LRK + D +R ++ LA R +R +
Sbjct: 120 LRMAAISASLNPRQSMVLGAQAQVENLRKMLVAMVDDVRVALIKLAERTCAIREVKNADE 179
Query: 219 YQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPL 278
++ ++ EV I+APLAH + ++ +ELEDLSFRYL P Y + L +
Sbjct: 180 EKRHRVAREVFDIYAPLAHRLGIGHIKWELEDLSFRYLEPEQYKQIAKLLHERRLDREQY 239
Query: 279 IDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVI 338
I +QL + L AD + GR K YS +K+ + G ++ DV +RV+
Sbjct: 240 IADVMKQLREELAATGIKAD------ISGRAKHIYSIWRKMQRKGLQFSQIYDVRAVRVL 293
Query: 339 IKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDN 398
+ EV R CYT I+ +LW+ +P DYIA PK NGYRSLH AV + +
Sbjct: 294 V---------PEV--RDCYTALGIVHTLWRHIPKEFDDYIANPKENGYRSLHTAV-IGPD 341
Query: 399 GKTRPLMEIQIRTEEMDMLAVNGTASHAFYKG 430
GK ++E+QIRT M A G +H YKG
Sbjct: 342 GK---VLEVQIRTHAMHEEAELGVCAHWRYKG 370
>gi|253995558|ref|YP_003047622.1| (p)ppGpp synthetase I SpoT/RelA [Methylotenera mobilis JLW8]
gi|253982237|gb|ACT47095.1| (p)ppGpp synthetase I, SpoT/RelA [Methylotenera mobilis JLW8]
Length = 748
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 103/322 (31%), Positives = 161/322 (50%), Gaps = 25/322 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T +SVA +LADL MD I A LL VVE ++ ++ + G A L+ ++
Sbjct: 69 ITHPVSVACILADLHMDVPTILAALLHDVVEDTDITTLDIKQKFGPQVADLVDGVTKLDK 128
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ Q A RK L D+R +++ LA RL M+ L+ + +Q +I+ E
Sbjct: 129 ---IEFQSASQAQAENFRKMLLAMSQDVRVILVKLADRLHNMQTLEAMRPEKQRIIAKET 185
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+AP+A+ + N + LEDLSF+YL+P Y + + + K +I ++L+
Sbjct: 186 LDIYAPIANRLGLNDVYQALEDLSFKYLYPMRYNAISKAIMAARGNRKEVI----SKILE 241
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+K LAD + V GR K YS KK+ +V D+ G R+++K N
Sbjct: 242 SIKKQ--LADFGIEAEVSGREKHLYSVYKKMTSKATPFSQVYDIYGFRIVVKDLPN---- 295
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + L+K +P + KDYIA PKANGY+SLH + G +E+Q
Sbjct: 296 -------CYLALGALHGLYKPIPSKFKDYIAIPKANGYQSLHTTL----FGPFGTPIEVQ 344
Query: 409 IRTEEMDMLAVNGTASHAFYKG 430
IR+ +M +A G A+H YK
Sbjct: 345 IRSADMHNIADAGVAAHWLYKA 366
>gi|319947807|ref|ZP_08022001.1| GTP diphosphokinase [Dietzia cinnamea P4]
gi|319438531|gb|EFV93457.1| GTP diphosphokinase [Dietzia cinnamea P4]
Length = 788
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 164/321 (51%), Gaps = 27/321 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA + A++ MD + A LL VE S++Q+ G AHL+ ++
Sbjct: 107 ITHPLAVATICAEMGMDTTTLVAALLHDTVEDTDYSLEQLEADYGGEVAHLVDGVTKLD- 165
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
K+ + A +RK + +D R L++ +A RL MR + +LP +Q+ + E
Sbjct: 166 ----KVDFGEAAEAETIRKMIIAMAHDPRVLVIKVADRLHNMRTMRFLPPEKQVKKARET 221
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+++ APLAH + + +ELEDL+F L P Y + + P D+Y ++
Sbjct: 222 LEVIAPLAHRLGMATVKWELEDLAFAILEPKKYQEIVRLV----ADRAPSRDVYLNTVIN 277
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+K D A++ V+GR K +S +K++ GR +E++D++G+RV+
Sbjct: 278 RVKADLEKANI--QARVEGRPKHYWSIYQKMIVRGREFDEIHDLVGIRVLCDDV------ 329
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY ++ S WK MP R KDYIA+P+ YRSLH V + +GK +EIQ
Sbjct: 330 -----RDCYAAIGVVHSTWKPMPGRFKDYIAQPRFGVYRSLHTTV-IGPDGKP---LEIQ 380
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM A G A+H YK
Sbjct: 381 IRTHEMHRNAEYGIAAHWRYK 401
>gi|339499056|ref|YP_004697091.1| (p)ppGpp synthetase I SpoT/RelA [Spirochaeta caldaria DSM 7334]
gi|338833405|gb|AEJ18583.1| (p)ppGpp synthetase I, SpoT/RelA [Spirochaeta caldaria DSM 7334]
Length = 678
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 109/322 (33%), Positives = 170/322 (52%), Gaps = 25/322 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L VA +L DL++DA+ ISA LL V+E + + + + L+ ++ + ++
Sbjct: 50 LGVASILVDLKLDADTISAALLHDVLEDTATTGEAIEQKFNKDVRKLVEGVTKIAD-IHA 108
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + L + A +RK DIR +++ LA +L MR LDYLP ++ + + + I+
Sbjct: 109 KNKTLQE--AENIRKMLFAMVQDIRVILIKLADKLHNMRTLDYLPPERRKANAQDCLDIY 166
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + +++ ELEDLS ++L Y + + + + ++ +E +L
Sbjct: 167 APLADRLGISWIKDELEDLSLKHLNRDVYDQIKGIVALKKKDRESFLNRVQEAIL----- 221
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
L +V V R K YS +K+ K + PEE+ D+ G+R+ L NT +
Sbjct: 222 -TETQKLGIEVVVNARAKHFYSIYQKMRKRNKGPEELFDLFGIRI-------LCNTVD-- 271
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CYT + LWK + R KDYIA PK+NGY+SLH V +S +GK L+EIQIRT+
Sbjct: 272 --DCYTLVGTVHHLWKPIEGRFKDYIAMPKSNGYQSLHTTV-MSFDGK---LLEIQIRTK 325
Query: 413 EMDMLAVNGTASHAFYKGGLTN 434
EM +A G ASH YK G T+
Sbjct: 326 EMHQIAEYGVASHWLYKKGTTS 347
>gi|50915040|ref|YP_061012.1| GTP pyrophosphokinase [Streptococcus pyogenes MGAS10394]
gi|50904114|gb|AAT87829.1| GTP pyrophosphokinase [Streptococcus pyogenes MGAS10394]
Length = 743
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 104/328 (31%), Positives = 171/328 (52%), Gaps = 34/328 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +LADL +DA ++ G L VVE +++ ++ G H++ + +
Sbjct: 55 IVHPIQVAGILADLHLDAVTVACGFLHDVVEDTDITLDEIEADFG-------HDARDIVD 107
Query: 170 NVN----LKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMI 224
V ++ + +++ A RK + DIR +++ LA RL MR L +L + +Q I
Sbjct: 108 GVTKLGKVEYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERI 167
Query: 225 SLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKE 284
S E M+I+APLAH + + + +ELEDL+FRYL + + ++ + L+ E
Sbjct: 168 SRETMEIYAPLAHRLGISRIKWELEDLAFRYLNETEFYKISHMMKEKRREREALV----E 223
Query: 285 QLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSN 344
++ +KT T L D V GR K YS +K+ + +++ D++ +R +++ S+
Sbjct: 224 AIVSKVKTYTTQQGLFGD--VYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCVMETQSD 281
Query: 345 LVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPL 404
+ Y I LW+ MP R KDYIA PKANGY+S+H V G P+
Sbjct: 282 V-----------YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI 326
Query: 405 MEIQIRTEEMDMLAVNGTASHAFYKGGL 432
EIQIRT++M +A G A+H YK G+
Sbjct: 327 -EIQIRTKDMHQVAEYGVAAHWAYKKGV 353
>gi|407796127|ref|ZP_11143083.1| GTP pyrophosphokinase [Salimicrobium sp. MJ3]
gi|407019481|gb|EKE32197.1| GTP pyrophosphokinase [Salimicrobium sp. MJ3]
Length = 733
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 164/319 (51%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L +L++DAE I++G L VE GV+++ ++ A L+ ++ +
Sbjct: 55 VQVAGILVNLELDAETIASGFLHDTVEDTGVTVEDLKVTFNEEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +LP +Q IS E ++I
Sbjct: 112 KYKSKEEQQAENHRKMFVAMAKDLRVILIKLADRLHNMRTLKHLPAEKQRRISNETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ + +D Q+ L
Sbjct: 172 APLAHRLGISTIKWELEDTALRYLNPQQYYRIVHLMKQKRNEREHYVDEVINQIRGELDN 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
ADL GR K YS KK++ + E+ D+L +R+ LVN+
Sbjct: 232 VNIEADL------DGRPKHLYSIYKKMVLQSKQFNEIYDLLAVRI-------LVNSI--- 275
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY II + WK MP R KDYIA PK N Y+SLH V + G PL E+QIRT
Sbjct: 276 -KDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNLYQSLHTTV-IGPKGD--PL-EVQIRTH 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A G A+H YK G
Sbjct: 331 DMHEIAEYGIAAHWAYKEG 349
>gi|406936392|gb|EKD70123.1| hypothetical protein ACD_46C00628G0005 [uncultured bacterium]
Length = 731
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 167/325 (51%), Gaps = 32/325 (9%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++VA +LA ++MD I A +L VVE V ++ ++ G + L+ +
Sbjct: 65 ITHPVAVAEILAQMRMDPPTIMAAILHDVVEDTPVKQAEIAEKFGQEVSDLV-------D 117
Query: 170 NVNLKLQVLDDETAAA----LRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMI 224
V Q+ D A A RK + DIR +++ LA RL MR + LP +++ I
Sbjct: 118 GVTKLTQIHFDNYAQAQAENFRKMVMAMASDIRVILVKLADRLHNMRTIYALPPHKRRRI 177
Query: 225 SLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKE 284
SLE ++I +P+A+ + + ELEDL F ++PF Y VD + K ++++ +
Sbjct: 178 SLETLEIFSPIANRLGMHAFRVELEDLGFATMYPFRYKVVDRAVSKATGNRKEIMEMIDQ 237
Query: 285 QLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSN 344
Q+ LK + ++ GR K YS KK+L+ E+ DV G R+I+ +
Sbjct: 238 QIRDGLKKAN-----IPSPTLSGRGKHVYSIYKKMLQKHLSFSEIMDVYGFRIIV----D 288
Query: 345 LVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPL 404
V+T CY ++ +L+K + R KDYIA PKANGY+SLH + G
Sbjct: 289 KVDT-------CYRVLGVLHNLFKPITQRFKDYIAIPKANGYQSLHTTL----FGPYGVP 337
Query: 405 MEIQIRTEEMDMLAVNGTASHAFYK 429
+E+QIRTEEM +A NG A+H YK
Sbjct: 338 IEVQIRTEEMHKMAENGIAAHWLYK 362
>gi|114321589|ref|YP_743272.1| (p)ppGpp synthetase I SpoT/RelA [Alkalilimnicola ehrlichii MLHE-1]
gi|114227983|gb|ABI57782.1| (p)ppGpp synthetase I, SpoT/RelA [Alkalilimnicola ehrlichii MLHE-1]
Length = 730
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 162/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LA+++MD + I A +L V+E + +Q+R + G A L+ + +
Sbjct: 64 ITHPLAVARILAEMRMDGDSIVAAILHDVIEDTPTAKEQLRSQFGDDVAELV-DGVSKLT 122
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ K + + A RK L DIR +++ LA RL MR + + +++ I+ E
Sbjct: 123 QIDFKSKA--EAQAENFRKMVLAMARDIRVILIKLADRLHNMRTIWVMAPHKRRRIARET 180
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A + N + ELEDL F L+P Y + LR +ID
Sbjct: 181 LEIYAPIAQRLGINTVRVELEDLGFAALYPLRYRVLKEKLRRQRGHRGEIIDKV------ 234
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
C + +A+ V GR K +S +K+ G +V DV G RV+++ +
Sbjct: 235 CEVIEGRMAEAAIQGQVSGREKHLWSIYQKMQTKGLNFRDVFDVYGFRVLVESVDD---- 290
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY ++ L+K P R KDYIA PKANGY+SLH + G R +E+Q
Sbjct: 291 -------CYRMLGVLHGLYKPRPGRVKDYIAIPKANGYQSLHTTL----IGPHRIRLEVQ 339
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
+RT EMD +A +G A+H YK
Sbjct: 340 VRTWEMDQVAESGIAAHWLYK 360
>gi|224476731|ref|YP_002634337.1| GTP pyrophosphokinase [Staphylococcus carnosus subsp. carnosus
TM300]
gi|222421338|emb|CAL28152.1| GTP pyrophosphokinase [Staphylococcus carnosus subsp. carnosus
TM300]
Length = 729
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 167/330 (50%), Gaps = 47/330 (14%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++ +D I AG L V+E + V+ A ++ ++K +
Sbjct: 55 IQVAGILTEMHLDGPTIVAGFLHDVIEDTPYTFDDVKAMFNDEVAMIVEGVTKLKK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 112 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISKETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED++ RY+ Y + ++ + +
Sbjct: 172 APLAHRLGINTIKWELEDIALRYIDGVQYFRIVNLMKKKRS-----------------ER 214
Query: 293 DATLADLVEDVS-----------VQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKP 341
+A +A+ ++ +S + GR K YS +K++K + +++ D+L +R+I+
Sbjct: 215 EAYIANAIDRISAEMDKMHISGEINGRPKHIYSIYRKMMKQKKQFDQIFDLLAVRIIVDS 274
Query: 342 SSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKT 401
+ CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG
Sbjct: 275 IKD-----------CYAVLGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTV-VGPNGD- 321
Query: 402 RPLMEIQIRTEEMDMLAVNGTASHAFYKGG 431
PL EIQIRT+EM +A +G A+H YK G
Sbjct: 322 -PL-EIQIRTQEMHEIAEHGVAAHWAYKEG 349
>gi|15606196|ref|NP_213573.1| (p)ppGpp 3-pyrophosphohydrolase [Aquifex aeolicus VF5]
gi|6647846|sp|O67012.1|SPOT_AQUAE RecName: Full=Guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase; AltName: Full=Penta-phosphate
guanosine-3'-pyrophosphohydrolase; Short=(ppGpp)ase
gi|2983390|gb|AAC06975.1| (p)ppGpp 3-pyrophosphohydrolase [Aquifex aeolicus VF5]
Length = 696
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 116/326 (35%), Positives = 175/326 (53%), Gaps = 28/326 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VAL LA+L MD E I A LL +E + +++++R G A L+ ++ +
Sbjct: 54 LNVALKLAELGMDHETIIAALLHDTLEDTDTTYEEIKERFGERVAKLVEGVTKI-GKIKY 112
Query: 174 KLQVLDDETAAALRKFCL-TYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K E A RK L T D R ++L L+ RLD ++ L ++ I+ E M+I+
Sbjct: 113 K-----SEQAENYRKLILATAEDPRVILLKLSDRLDNVKTLWVFREEKRKKIAKETMEIY 167
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + ELED +F+YL+P Y V +++ K L + ++ ++ ++
Sbjct: 168 APLAHRLGVWSIKNELEDWAFKYLYPEEYEKVRNFVKE---SRKNLEEYLRKYVIPKVRK 224
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ L + ++ R K YS +K + G E+V+D+LG+R+I VNT V
Sbjct: 225 E--LEKYGIEAEIKYRSKHYYSIWEKTRRKGIRLEDVHDILGVRII-------VNT--VP 273
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
E CYT II SL++ +P + KDYI+ PK N Y+SLH V ++D GK L+E QIRT
Sbjct: 274 E--CYTVLGIIHSLFRPVPGKFKDYISLPKPNLYQSLHTTV-IADKGK---LVEFQIRTW 327
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEA 438
EM A G ASH YK G NP +A
Sbjct: 328 EMHERAEKGIASHWAYKEG-KNPSDA 352
>gi|334341782|ref|YP_004546762.1| RelA/SpoT family protein [Desulfotomaculum ruminis DSM 2154]
gi|334093136|gb|AEG61476.1| RelA/SpoT family protein [Desulfotomaculum ruminis DSM 2154]
Length = 723
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 169/324 (52%), Gaps = 27/324 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ L+++++LA+LQ+D + ++AGLL VVE G+++ + G A+++ ++
Sbjct: 46 IVHPLAISIILAELQLDLQTVAAGLLHDVVEDTGITLTDIESNFGPEVANMVDGVTKLGK 105
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+ Q ++ A LRK F DIR +++ LA RL +R L + +Q ++ E
Sbjct: 106 ---LQFQNKEERQAENLRKMFLAMAKDIRVILIKLADRLHNLRTLQFQSERKQKEVAEET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWL-RSHETGSKPLIDIYKEQLL 287
+ APLAH + + +ELEDLSFRY P Y + + +S + + ++ KE
Sbjct: 163 LMFFAPLAHRLGIYKIKWELEDLSFRYKEPEQYQRMKVQIAKSRVKREEHIQEVIKE--- 219
Query: 288 QCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVN 347
LA + +QGR K+ YS +K+++ + +++ DV +RV++ +
Sbjct: 220 ----LGEKLAAVNIKTEIQGRPKNLYSIYQKMMEQQKELKDIFDVQAVRVLVSTVKD--- 272
Query: 348 TSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEI 407
CY I +LWK +P R KDYIA PK+N Y+SLH V + G+ +EI
Sbjct: 273 --------CYGALGIAHTLWKPIPGRFKDYIAMPKSNMYQSLHTTV-IGPQGEP---VEI 320
Query: 408 QIRTEEMDMLAVNGTASHAFYKGG 431
QIRT EM +A G A+H YK G
Sbjct: 321 QIRTWEMHKVAEYGIAAHWRYKEG 344
>gi|237742590|ref|ZP_04573071.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium sp. 4_1_13]
gi|294784891|ref|ZP_06750179.1| GTP diphosphokinase [Fusobacterium sp. 3_1_27]
gi|229430238|gb|EEO40450.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium sp. 4_1_13]
gi|294486605|gb|EFG33967.1| GTP diphosphokinase [Fusobacterium sp. 3_1_27]
Length = 724
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 168/320 (52%), Gaps = 33/320 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L D++MD + I AGLL VVE + I ++ G A L+
Sbjct: 50 VEVAKILMDMKMDTDTIVAGLLHDVVEDTLIPIADIKYNFGDTVATLVDGVT-------- 101
Query: 174 KLQVLDDET---AAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVM 229
KL+ L + T A +RK L +IR +++ LA RL MR L ++ +Q IS E +
Sbjct: 102 KLKALPNGTKNQAENIRKMILAMAENIRVILIKLADRLHNMRTLKFMKPEKQQSISKETL 161
Query: 230 KIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQC 289
I+APLAH + + ELEDL+F YL +L + + + + K I+ + +++
Sbjct: 162 DIYAPLAHRLGMAKVKSELEDLAFSYLHHDEFLEIKKLVDNTKEERKDYIENFIRTMIR- 220
Query: 290 LKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTS 349
TL++L V+GR+K YS KK+ + G+ +++ D++G+RVI+ +
Sbjct: 221 -----TLSELGIKAEVKGRFKHFYSIYKKMYQKGKEFDDIYDLMGVRVIVDDKA------ 269
Query: 350 EVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQI 409
CY I+ S + +P R KDYIA PK+N Y+S+H + V GK +EIQI
Sbjct: 270 -----TCYHVLGIVHSQYTPVPGRFKDYIAVPKSNNYQSIHTTI-VGPLGK---FIEIQI 320
Query: 410 RTEEMDMLAVNGTASHAFYK 429
RT++MD +A G A+H YK
Sbjct: 321 RTKDMDEIAEEGIAAHWNYK 340
>gi|403252468|ref|ZP_10918778.1| (p)ppGpp synthetase [Thermotoga sp. EMP]
gi|402812481|gb|EJX26960.1| (p)ppGpp synthetase [Thermotoga sp. EMP]
Length = 733
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 35/329 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESG-GVSIQQVRDRIGIGTAHLLHESLRVK 168
+T + V +LA L +D + A LL VVE G VS+ Q++ G A ++ +V
Sbjct: 76 ITHPVEVTKILAGLGVDVTTLVAALLHDVVEDGENVSLDQIKKEFGPEVARIVDGVTKV- 134
Query: 169 NNVNLKLQVLDD---ETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYL-----PRYQ 220
+N+N + D + + F D+R + + LA RL MR + Y+ RY+
Sbjct: 135 SNINAPIGRDQDSRKKIETIQKMFFAMAEDMRVIFVKLADRLHNMRTIHYVQDQEKKRYK 194
Query: 221 QLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLID 280
+ E ++I+APLAH + + ELEDL+F+ L+P Y + + + +
Sbjct: 195 ----AYETLEIYAPLAHKLGIYSIKSELEDLAFKVLYPEEYYKIKELVAEKRKEREKRTN 250
Query: 281 IYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIK 340
Y L L+ A V+GRYK YS +K+ + G+ EE+ D++ LRVI+K
Sbjct: 251 EYISLLKSALEEHKIKA------IVEGRYKHYYSIWRKMREKGKKFEEIYDLIALRVIVK 304
Query: 341 PSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGK 400
+ CYT I+ ++WK +P R KDYIA PK+NGYRSLH V G
Sbjct: 305 DVTT-----------CYTVLGIVHNIWKPLPGRFKDYIAAPKSNGYRSLHTTV---ITGY 350
Query: 401 TRPLMEIQIRTEEMDMLAVNGTASHAFYK 429
PL EIQIR EEM A G +H YK
Sbjct: 351 GEPL-EIQIRDEEMHREAEYGLIAHWIYK 378
>gi|224368342|ref|YP_002602505.1| RelA protein [Desulfobacterium autotrophicum HRM2]
gi|223691058|gb|ACN14341.1| RelA [Desulfobacterium autotrophicum HRM2]
Length = 716
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 161/324 (49%), Gaps = 26/324 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L+ L VA +LAD+++D E I+A LL V+E + Q++ + G G H++ ++
Sbjct: 46 LSHPLEVAAILADMKLDVESIAAALLHDVIEDTHATEQEILEMFGPGILHIVAGVTKISK 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDY-LPRYQQLMISLE 227
L + A +LRK L D IR +++ LA R+ MR L + + +Q I+ E
Sbjct: 106 ---LTFSTKAAQQAESLRKMILAMADDIRVVLIKLADRIHNMRTLKFHKSQEKQRSIAQE 162
Query: 228 VMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLL 287
+ I+AP+A + ++ ELEDLSF Y P Y +D + + + I E++
Sbjct: 163 TLDIYAPIAARLGIFWIKQELEDLSFLYTHPEEYASIDLLVNKAKEERESYIATVMERVK 222
Query: 288 QCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVN 347
+ L AD V+GRYK YS K++ EE+ D++ R+I+ S
Sbjct: 223 EKLANSNIEAD------VKGRYKQHYSIYHKMVTQNLEFEELYDIVAFRIIVDTVSR--- 273
Query: 348 TSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEI 407
CY +I S+WK + + KDYI PK N Y+SLH V G +E+
Sbjct: 274 --------CYEVMGLIHSMWKPISGKIKDYIGVPKPNMYQSLHTTV----IGPRGDRVEL 321
Query: 408 QIRTEEMDMLAVNGTASHAFYKGG 431
QIRT EMD +A +G A+H YK G
Sbjct: 322 QIRTREMDKIAESGIAAHWSYKQG 345
>gi|90021883|ref|YP_527710.1| GTP diphosphokinase [Saccharophagus degradans 2-40]
gi|89951483|gb|ABD81498.1| RelA/SpoT family protein [Saccharophagus degradans 2-40]
Length = 746
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/340 (33%), Positives = 171/340 (50%), Gaps = 31/340 (9%)
Query: 108 SPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLR- 166
+ L L +A +LA+LQ+DAE ++A LL + V +S + V + G G H L + +R
Sbjct: 65 TTLNAGLDMAEILAELQLDAESLTAALLYRSVRENKISTEVVNELFGRGV-HRLIDGVRQ 123
Query: 167 ---VKNNVNLKLQVL----DDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPR 218
+ N + + E A +RK + D +R ++ LA R +R + P
Sbjct: 124 MAAISGLTNHSGESVFGQESAEQAENVRKMLVAMVDDVRVALIKLAERTCAIRAVKKAPL 183
Query: 219 YQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPL 278
++ ++ EV I+APLAH + ++ +ELEDLSFRYL P+ Y ++ L +
Sbjct: 184 EKRQRVAHEVADIYAPLAHRLGIGHIKWELEDLSFRYLRPYDYKYIAKLLDERRLDRQE- 242
Query: 279 IDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVI 338
Y E ++ +KT + A+ +E V GR K YS +K+ K +V D+ +R+
Sbjct: 243 ---YIENVIGIIKTQLS-AEAIE-ADVFGRAKHIYSIWRKMRKKNIDFSQVYDIRAIRI- 296
Query: 339 IKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDN 398
LVNT ER CYT I+ +LW+ +P DYIA PK NGYRSLH AV +
Sbjct: 297 ------LVNT----ERECYTVLGIVHALWRNIPLEFDDYIANPKENGYRSLHTAV----H 342
Query: 399 GKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNPEEA 438
G ++E+QIRT+ M A G +H YK EA
Sbjct: 343 GPGSRVLEVQIRTKAMHEEAEFGVCAHWRYKNAEKGGAEA 382
>gi|30264477|ref|NP_846854.1| GTP pyrophosphokinase [Bacillus anthracis str. Ames]
gi|30259135|gb|AAP28340.1| GTP diphosphokinase [Bacillus anthracis str. Ames]
Length = 727
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 163/321 (50%), Gaps = 25/321 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD +SAG L VVE ++++ + A L+ ++ +
Sbjct: 55 IQVAGVLVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP+ +Q I+ E ++I
Sbjct: 112 KYKSHEQQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED S RYL P Y + ++ + +D +++ ++
Sbjct: 172 APLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLD----EVMTGIR- 226
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
L ++ + GR K YS +K+ + E+ D+L +RV++ +
Sbjct: 227 -EKLDEVAIQPEISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+QIRT+
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTV-IGPKGD--PL-EVQIRTK 330
Query: 413 EMDMLAVNGTASHAFYKGGLT 433
EM +A G A+H YK G T
Sbjct: 331 EMHEIAEFGIAAHWAYKEGKT 351
>gi|393775585|ref|ZP_10363896.1| bifunctional (p)ppGpp synthetase II/guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Ralstonia sp.
PBA]
gi|392717311|gb|EIZ04874.1| bifunctional (p)ppGpp synthetase II/guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Ralstonia sp.
PBA]
Length = 848
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/384 (30%), Positives = 186/384 (48%), Gaps = 32/384 (8%)
Query: 48 SPAPLPSTAGEKMVVKLVGAFNELTERMNVLSSSSSRLLFKALKLSIPMLQSLPLSPDSR 107
P P+ + VV + + L E++ L + +L+ +A S L S
Sbjct: 118 GPTSQPAAPPRQQVVSI----SALAEKLKYLKPADIKLVREAFHFSDEA--HLGQYRQSG 171
Query: 108 SP-LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLR 166
P +T ++VA L AD +DA+ I A LL V+E GV+ ++ ++ G A L+ +
Sbjct: 172 EPYITHPVAVAELCADWMLDAQSIMAALLHDVMEDQGVTKTELAEKFGPKVAELVDGLTK 231
Query: 167 VKNNVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMIS 225
+ L+ Q + A + RK L D+R +++ LA R MR LD++P ++ I+
Sbjct: 232 LDK---LEFQSREQAQAESFRKMLLAMARDVRVILVKLADRTHNMRTLDHVPSEKRRRIA 288
Query: 226 LEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQ 285
LE M+I+AP+AH + N EL++LSF+ PF Y +D +R+ + ++ E
Sbjct: 289 LETMEIYAPIAHRLGLNSTYRELQELSFKVGSPFRYATLDKAIRAARGNRREVVSRILES 348
Query: 286 LLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNL 345
+ L+ A++ GR K+ +S K+ + +V DV G RV++
Sbjct: 349 AQRALRDAGIPAEM------SGREKTVFSIYNKMHEKQLSFSQVLDVYGFRVVVD----- 397
Query: 346 VNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLM 405
+ CY + SL+K MP + KDYIA PK NGY+SLH + V G +
Sbjct: 398 ------TQMQCYMAIGALHSLYKPMPGKFKDYIAIPKVNGYQSLHTTL-VGPFGTP---V 447
Query: 406 EIQIRTEEMDMLAVNGTASHAFYK 429
E QIRT EM +A G A+H YK
Sbjct: 448 EFQIRTREMHQIAEAGVAAHWMYK 471
>gi|418045100|ref|ZP_12683196.1| (p)ppGpp synthetase I, SpoT/RelA [Thermotoga maritima MSB8]
gi|351678182|gb|EHA61329.1| (p)ppGpp synthetase I, SpoT/RelA [Thermotoga maritima MSB8]
Length = 714
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 35/329 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESG-GVSIQQVRDRIGIGTAHLLHESLRVK 168
+T + V +LA L +D + A LL VVE G VS+ Q++ G A ++ +V
Sbjct: 57 ITHPVEVTKILAGLGVDVTTLVAALLHDVVEDGENVSLDQIKKEFGPEVARIVDGVTKV- 115
Query: 169 NNVNLKLQVLDD---ETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYL-----PRYQ 220
+N+N + D + + F D+R + + LA RL MR + Y+ RY+
Sbjct: 116 SNINAPIGRDQDSRKKIETIQKMFFAMAEDMRVIFVKLADRLHNMRTIHYVQDPEKKRYK 175
Query: 221 QLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLID 280
+ E ++I+APLAH + + ELEDL+F+ L+P Y + + + +
Sbjct: 176 ----AYETLEIYAPLAHKLGIYSIKSELEDLAFKVLYPEEYYKIKELVAEKRKEREKRTN 231
Query: 281 IYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIK 340
Y L L+ A V+GRYK YS +K+ + G+ EE+ D++ LRVI+K
Sbjct: 232 EYISLLKSALEEHKIKA------IVEGRYKHYYSIWRKMKEKGKKFEEIYDLIALRVIVK 285
Query: 341 PSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGK 400
+ CYT I+ ++WK +P R KDYIA PK+NGYRSLH V G
Sbjct: 286 DVTT-----------CYTVLGIVHNIWKPLPGRFKDYIAAPKSNGYRSLHTTV---ITGY 331
Query: 401 TRPLMEIQIRTEEMDMLAVNGTASHAFYK 429
PL EIQIR EEM A G +H YK
Sbjct: 332 GEPL-EIQIRDEEMHREAEYGLIAHWIYK 359
>gi|169831064|ref|YP_001717046.1| (p)ppGpp synthetase I SpoT/RelA [Candidatus Desulforudis
audaxviator MP104C]
gi|169637908|gb|ACA59414.1| (p)ppGpp synthetase I, SpoT/RelA [Candidatus Desulforudis
audaxviator MP104C]
Length = 712
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/323 (31%), Positives = 173/323 (53%), Gaps = 25/323 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ L VA +LA+L++D E + GLL V+E G+ + +R+ G A L+ +++
Sbjct: 45 IVHPLEVAQILAELELDLESVVGGLLHDVIEDAGIELCVIREEFGDEVALLVDGVTKLRR 104
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L + +++ A LRK L D+R +++ LA RL +R L Y +Q I+ E
Sbjct: 105 ---LAYRSKEEQQAENLRKMLLAMAKDVRVILIKLADRLHNLRTLQYHTVPKQREIAQET 161
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I APLAH + + ELED++FR+ P + + L + ++ + + Y +++
Sbjct: 162 LEIFAPLAHRLGIYRIKSELEDIAFRFREPERHEELTRRL----SATRSVREGYIGGVIK 217
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L+ + D+ QGR K YS +K+L + EE+ D+LG+R++++ +
Sbjct: 218 ILQEKLGGMGITADI--QGRPKHLYSIYQKMLAQEKDLEEIFDILGIRILVESVKD---- 271
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY T ++ +LWK +P R KDYIA PK+N Y+SLH +V V G+ ++EIQ
Sbjct: 272 -------CYATLGVVHTLWKPVPGRFKDYIAMPKSNMYQSLHTSV-VGPEGE---VLEIQ 320
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
+RT +M A G A+H YK G
Sbjct: 321 VRTWDMHRTAEYGIAAHWRYKSG 343
>gi|47529935|ref|YP_021284.1| GTP pyrophosphokinase [Bacillus anthracis str. 'Ames Ancestor']
gi|49187297|ref|YP_030549.1| GTP pyrophosphokinase [Bacillus anthracis str. Sterne]
gi|65321773|ref|ZP_00394732.1| COG0317: Guanosine polyphosphate pyrophosphohydrolases/synthetases
[Bacillus anthracis str. A2012]
gi|165871974|ref|ZP_02216615.1| GTP diphosphokinase [Bacillus anthracis str. A0488]
gi|167636486|ref|ZP_02394783.1| GTP diphosphokinase [Bacillus anthracis str. A0442]
gi|167640729|ref|ZP_02398989.1| GTP diphosphokinase [Bacillus anthracis str. A0193]
gi|170688669|ref|ZP_02879874.1| GTP diphosphokinase [Bacillus anthracis str. A0465]
gi|170709262|ref|ZP_02899682.1| GTP diphosphokinase [Bacillus anthracis str. A0389]
gi|177653959|ref|ZP_02936000.1| GTP diphosphokinase [Bacillus anthracis str. A0174]
gi|190567043|ref|ZP_03019959.1| GTP diphosphokinase [Bacillus anthracis str. Tsiankovskii-I]
gi|227817185|ref|YP_002817194.1| GTP diphosphokinase [Bacillus anthracis str. CDC 684]
gi|229602848|ref|YP_002868693.1| GTP diphosphokinase [Bacillus anthracis str. A0248]
gi|254684162|ref|ZP_05148022.1| GTP diphosphokinase [Bacillus anthracis str. CNEVA-9066]
gi|254736509|ref|ZP_05194215.1| GTP diphosphokinase [Bacillus anthracis str. Western North America
USA6153]
gi|254741547|ref|ZP_05199234.1| GTP diphosphokinase [Bacillus anthracis str. Kruger B]
gi|254751354|ref|ZP_05203391.1| GTP diphosphokinase [Bacillus anthracis str. Vollum]
gi|254757686|ref|ZP_05209713.1| GTP diphosphokinase [Bacillus anthracis str. Australia 94]
gi|386738296|ref|YP_006211477.1| GTP pyrophosphokinase [Bacillus anthracis str. H9401]
gi|421506659|ref|ZP_15953582.1| GTP pyrophosphokinase [Bacillus anthracis str. UR-1]
gi|421638475|ref|ZP_16079071.1| GTP pyrophosphokinase [Bacillus anthracis str. BF1]
gi|47505083|gb|AAT33759.1| GTP diphosphokinase [Bacillus anthracis str. 'Ames Ancestor']
gi|49181224|gb|AAT56600.1| GTP pyrophosphokinase [Bacillus anthracis str. Sterne]
gi|164712264|gb|EDR17800.1| GTP diphosphokinase [Bacillus anthracis str. A0488]
gi|167511301|gb|EDR86687.1| GTP diphosphokinase [Bacillus anthracis str. A0193]
gi|167528079|gb|EDR90876.1| GTP diphosphokinase [Bacillus anthracis str. A0442]
gi|170125838|gb|EDS94745.1| GTP diphosphokinase [Bacillus anthracis str. A0389]
gi|170667355|gb|EDT18113.1| GTP diphosphokinase [Bacillus anthracis str. A0465]
gi|172081014|gb|EDT66092.1| GTP diphosphokinase [Bacillus anthracis str. A0174]
gi|190562034|gb|EDV16003.1| GTP diphosphokinase [Bacillus anthracis str. Tsiankovskii-I]
gi|227006997|gb|ACP16740.1| GTP diphosphokinase [Bacillus anthracis str. CDC 684]
gi|229267256|gb|ACQ48893.1| GTP diphosphokinase [Bacillus anthracis str. A0248]
gi|384388148|gb|AFH85809.1| GTP pyrophosphokinase [Bacillus anthracis str. H9401]
gi|401823652|gb|EJT22799.1| GTP pyrophosphokinase [Bacillus anthracis str. UR-1]
gi|403394901|gb|EJY92141.1| GTP pyrophosphokinase [Bacillus anthracis str. BF1]
Length = 727
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 163/321 (50%), Gaps = 25/321 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD +SAG L VVE ++++ + A L+ ++ +
Sbjct: 55 IQVAGVLVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP+ +Q I+ E ++I
Sbjct: 112 KYKSHEQQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED S RYL P Y + ++ + +D +++ ++
Sbjct: 172 APLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLD----EVMTGIR- 226
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
L ++ + GR K YS +K+ + E+ D+L +RV++ +
Sbjct: 227 -EKLDEVAIQPEISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PKAN Y+SLH V + G PL E+QIRT+
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTV-IGPKGD--PL-EVQIRTK 330
Query: 413 EMDMLAVNGTASHAFYKGGLT 433
EM +A G A+H YK G T
Sbjct: 331 EMHEIAEFGIAAHWAYKEGKT 351
>gi|402833070|ref|ZP_10881692.1| GTP diphosphokinase [Selenomonas sp. CM52]
gi|402281437|gb|EJU30072.1| GTP diphosphokinase [Selenomonas sp. CM52]
Length = 740
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/317 (33%), Positives = 168/317 (52%), Gaps = 26/317 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA +L DLQ+D ISA +L VVE ++ ++R+ G A L+ ++ +
Sbjct: 55 LAVAKILTDLQIDDITISAAILHDVVEDTTHTLDEMRELFGDEVAMLIDGVTKLGR---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ + RK F DIR +++ LA RL MR L Y+ +Q I+ E ++I+
Sbjct: 112 QYKSKEEQQLESYRKMFLAMAKDIRVIMIKLADRLHNMRTLKYMREDKQKRIARETIEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA+ + + + +ELEDL RYL P +Y + ++ + ID EQ+++ L+
Sbjct: 172 APLANRLGISNVKWELEDLCLRYLDPKAYYDLVESVKQKRQERQAFIDEAHEQIVEKLEE 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
A+ ++GR K YS KK+ +D + E+ D+ LRV++ +
Sbjct: 232 AHITAE------IRGRAKHFYSIYKKMKRDQKDISEIYDLSALRVLVDSVKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II ++WK +P R KDYIA PK+NGY+SLH V + PL EIQIRT
Sbjct: 278 ---CYGVLGIIHAMWKPLPGRFKDYIAMPKSNGYQSLHTTVIC----RGYPL-EIQIRTF 329
Query: 413 EMDMLAVNGTASHAFYK 429
M ++ G A+H YK
Sbjct: 330 AMHKVSEYGVAAHWKYK 346
>gi|310658609|ref|YP_003936330.1| GTP pyrophosphokinase [[Clostridium] sticklandii]
gi|308825387|emb|CBH21425.1| GTP pyrophosphokinase [[Clostridium] sticklandii]
Length = 729
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/330 (33%), Positives = 169/330 (51%), Gaps = 33/330 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L VA +LA+L++D I+AGL+ VVE VS + G A L+ ++ +
Sbjct: 48 LEVAKILAELELDVFTIAAGLMHDVVEDTEVSFSDIERLFGTEVAELVDGVTKLGK---I 104
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + ++ A LRK F DIR +++ LA RL MR L Y+ + + E ++I+
Sbjct: 105 EYKSKEETQAENLRKMFMAMGKDIRVILIKLADRLHNMRTLKYMSEEKAKEKATETIEIY 164
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYL----FVDTWLRSHETGSKPLIDIYKEQLLQ 288
AP+AH + + + +E+ED++ RYL P Y V R E + +ID+ K +L +
Sbjct: 165 APIAHRLGISRVKWEMEDIALRYLDPEGYYDLIEKVSKKRREREAYIQGVIDLLKNKLEE 224
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
A++ D ++GR K YS +K+ + EE+ D++ +R+++ +
Sbjct: 225 --------ANIEGD--IKGRAKHFYSIYRKMKYQSKSFEEIYDLMAVRILVDSLKD---- 270
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY I+ ++WK MP R KDYIA PK N Y+SLH V D PL EIQ
Sbjct: 271 -------CYGVVGIVHTIWKPMPGRFKDYIAMPKPNMYQSLHTTVLGPDG---EPL-EIQ 319
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEA 438
IRT+EM A G A+H YK G +P E+
Sbjct: 320 IRTKEMHRTAEFGIAAHWKYKEGKIDPNES 349
>gi|71911499|ref|YP_283049.1| GTP pyrophosphokinase [Streptococcus pyogenes MGAS5005]
gi|410681345|ref|YP_006933747.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pyogenes A20]
gi|417856072|ref|ZP_12501131.1| GTP pyrophosphokinase [Streptococcus pyogenes HKU QMH11M0907901]
gi|71854281|gb|AAZ52304.1| GTP pyrophosphokinase/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Streptococcus pyogenes
MGAS5005]
gi|387933027|gb|EIK41140.1| GTP pyrophosphokinase [Streptococcus pyogenes HKU QMH11M0907901]
gi|395453251|dbj|BAM29590.1| GTP pyrophosphokinase [Streptococcus pyogenes M1 476]
gi|409693934|gb|AFV38794.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pyogenes A20]
Length = 739
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/328 (31%), Positives = 171/328 (52%), Gaps = 34/328 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +LADL +DA ++ G L VVE +++ ++ G H++ + +
Sbjct: 51 IVHPIQVAGILADLHLDAVTVACGFLHDVVEDTDITLDEIEADFG-------HDARDIVD 103
Query: 170 NVN----LKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMI 224
V ++ + +++ A RK + DIR +++ LA RL MR L +L + +Q I
Sbjct: 104 GVTKLGKVEYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERI 163
Query: 225 SLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKE 284
S E M+I+APLAH + + + +ELEDL+FRYL + + ++ + L+ E
Sbjct: 164 SRETMEIYAPLAHRLGISRIKWELEDLAFRYLNETEFYKISHMMKEKRREREALV----E 219
Query: 285 QLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSN 344
++ +KT T L D V GR K YS +K+ + +++ D++ +R +++ S+
Sbjct: 220 AIVSKVKTYTTQQGLFGD--VYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCVMETQSD 277
Query: 345 LVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPL 404
+ Y I LW+ MP R KDYIA PKANGY+S+H V G P+
Sbjct: 278 V-----------YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI 322
Query: 405 MEIQIRTEEMDMLAVNGTASHAFYKGGL 432
EIQIRT++M +A G A+H YK G+
Sbjct: 323 -EIQIRTKDMHQVAEYGVAAHWAYKKGV 349
>gi|421144446|ref|ZP_15604359.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium nucleatum subsp. fusiforme ATCC 51190]
gi|395489103|gb|EJG09945.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium nucleatum subsp. fusiforme ATCC 51190]
Length = 724
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 168/320 (52%), Gaps = 33/320 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L D++MD + I AGLL VVE + I ++ G A L+
Sbjct: 50 VEVAKILMDMKMDTDTIVAGLLHDVVEDTLIPIADIKYNFGDTVATLVDGVT-------- 101
Query: 174 KLQVLDDET---AAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVM 229
KL+ L + T A +RK L +IR +++ LA RL MR L ++ +Q IS E +
Sbjct: 102 KLKALPNGTKNQAENIRKMILAMAENIRVILIKLADRLHNMRTLKFMKPEKQQSISKETL 161
Query: 230 KIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQC 289
I+APLAH + + ELEDL+F YL +L + + + + K I+ + +++
Sbjct: 162 DIYAPLAHRLGMAKVKSELEDLAFSYLHHDEFLEIKKLVDNTKEERKDYIENFIRTMIR- 220
Query: 290 LKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTS 349
TL++L V+GR+K YS KK+ + G+ +++ D++G+RVI+ +
Sbjct: 221 -----TLSELGIKAEVKGRFKHFYSIYKKMYQKGKEFDDIYDLMGVRVIVDDKA------ 269
Query: 350 EVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQI 409
CY I+ S + +P R KDYIA PK+N Y+S+H + V GK +EIQI
Sbjct: 270 -----TCYHVLGIVHSQYTPVPGRFKDYIAVPKSNNYQSIHTTI-VGPLGK---FIEIQI 320
Query: 410 RTEEMDMLAVNGTASHAFYK 429
RT++MD +A G A+H YK
Sbjct: 321 RTKDMDEIAEEGIAAHWNYK 340
>gi|303229459|ref|ZP_07316249.1| GTP diphosphokinase [Veillonella atypica ACS-134-V-Col7a]
gi|302515995|gb|EFL57947.1| GTP diphosphokinase [Veillonella atypica ACS-134-V-Col7a]
Length = 746
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 159/319 (49%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA +LA LQ+D + A LL VVE + + + G A L+ ++
Sbjct: 69 LAVAEILAHLQIDHITLIAALLHDVVEDTEYTKEDIEKLFGAEVAFLVDGVTKLNQ---F 125
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +D RK L D+R +++ L RL MR L ++ +Q I+ E ++I
Sbjct: 126 QYETKEDRQMENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKHMRSDKQKRIAKETLEIF 185
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + +ELEDLSFRYL P Y + ++ + +++ EQL + L
Sbjct: 186 APLAHRLGIFNVKWELEDLSFRYLEPDKYYDLVDQMKQKRQAREDIVNDTMEQLTKALGE 245
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
AD ++GR K YS KK+ KD R ++ D+L +RVI+ +
Sbjct: 246 AGIKAD------IKGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDTVPD-------- 291
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I S+WK +P+R KDYI+ PK+N Y+SLH V G +EIQIRT
Sbjct: 292 ---CYAVLGIAHSIWKPLPYRFKDYISMPKSNMYQSLHTTV----IGTMGQPVEIQIRTW 344
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM ++ G A+H YK G
Sbjct: 345 EMHRVSEYGVAAHWRYKEG 363
>gi|452944533|ref|YP_007500698.1| (p)ppGpp synthetase I, SpoT/RelA [Hydrogenobaculum sp. HO]
gi|452882951|gb|AGG15655.1| (p)ppGpp synthetase I, SpoT/RelA [Hydrogenobaculum sp. HO]
Length = 703
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 170/319 (53%), Gaps = 24/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
++VA +LA + MD I AGLL VVE ++++++ G A L+ ++
Sbjct: 53 IAVASILASIGMDYHSIVAGLLHDVVEDTDTTVEEIKREFGPQIASLVDGLTKIDK---Y 109
Query: 174 KLQVLDDETAAALRK--FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKI 231
K + A RK F ++ D+R +++ LA RL MR LDY+PR++QL I+ E + I
Sbjct: 110 KFSSKEHAKAENYRKMLFAMSK-DVRVIVIKLADRLHNMRTLDYMPRHKQLEIANETIDI 168
Query: 232 HAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIY-KEQLLQCL 290
+AP+AH + + ELEDL +Y P Y + +++ S+ + Y +L++ +
Sbjct: 169 YAPIAHRLGIWSIKKELEDLYLKYTHPEEYEKIKDFVQKISAESEVYLKKYFIPKLVEAI 228
Query: 291 KTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSE 350
+ D + ++Q R K YS +KL + E++ D+LG+RVI++ +
Sbjct: 229 --NDFFKDKKPNYTIQYRQKHIYSIYQKLKRKNLSLEDLQDILGIRVIVE---------D 277
Query: 351 VGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIR 410
V E CYT I+ S+++ +P DYI+ PK N Y+SLH AV+ G + ++E+QIR
Sbjct: 278 VAE--CYTVLGIVHSIFRPIPGSFDDYISLPKPNMYQSLHTAVE----GPKKRVVEVQIR 331
Query: 411 TEEMDMLAVNGTASHAFYK 429
T EM A G A+H YK
Sbjct: 332 TYEMHERAEKGIAAHWAYK 350
>gi|392330576|ref|ZP_10275191.1| (p)ppGpp synthetase [Streptococcus canis FSL Z3-227]
gi|391418255|gb|EIQ81067.1| (p)ppGpp synthetase [Streptococcus canis FSL Z3-227]
Length = 739
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 172/343 (50%), Gaps = 26/343 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL +DA ++ G L VVE ++ + G ++ ++ +
Sbjct: 55 IQVAGILADLHLDAVTVACGFLHDVVEDTDTTLDNIEADFGKDARDIVDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E M+I+
Sbjct: 112 EYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELEDLSFRYL + + ++ + L+D ++ +K+
Sbjct: 172 APLAHRLGISRIKWELEDLSFRYLNETEFYKISHMMKEKRREREALVD----DIVTKIKS 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
T L D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 228 YTTEQGLFGD--VYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCVMETQSDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQIRT+
Sbjct: 279 ----YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQIRTK 329
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALR 455
EM +A G A+H YK G+ K M EL L+
Sbjct: 330 EMHQVAEYGVAAHWAYKKGIRGKVNQAEQKVGMNWIKELVELQ 372
>gi|421451544|ref|ZP_15900905.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Streptococcus salivarius K12]
gi|400181975|gb|EJO16237.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Streptococcus salivarius K12]
Length = 739
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 186/364 (51%), Gaps = 28/364 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL +DA ++ G L VVE ++ + G +++ ++ +
Sbjct: 55 IQVAGILADLHLDAVTVACGFLHDVVEDTEKTLDDLEADFGTDVRNIVDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E M+I+
Sbjct: 112 EYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED++FRYL + + ++ + L+D +++ +KT
Sbjct: 172 APLAHRLGISRIKWELEDMAFRYLNEVEFYKISHMMKEKRREREELVD----EIVDKIKT 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
LV D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 228 YTAEQGLVGD--VYGRPKHIYSIYRKMRDKKKRFDQIYDLIAIRCVMETHSDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PK+NGY+S+H V G P+ EIQIRT+
Sbjct: 279 ----YAMLGYIHELWRPMPGRFKDYIANPKSNGYQSIHTTV----YGPKGPI-EIQIRTK 329
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFEFDWR 472
EM +A G A+H YK G+ ++K M +L + L+D + + GF +
Sbjct: 330 EMHQVAEYGVAAHWAYKKGIKGKVDSKESALGMNWIKDL--VELQDASNGDAMGFVDSVK 387
Query: 473 DRVF 476
+ +F
Sbjct: 388 EDIF 391
>gi|15643492|ref|NP_228538.1| (p)ppGpp synthetase [Thermotoga maritima MSB8]
gi|4981255|gb|AAD35811.1|AE001744_1 (p)ppGpp synthetase [Thermotoga maritima MSB8]
Length = 751
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 162/329 (49%), Gaps = 35/329 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESG-GVSIQQVRDRIGIGTAHLLHESLRVK 168
+T + V +LA L +D + A LL VVE G VS+ Q++ G A ++ +V
Sbjct: 94 ITHPVEVTKILAGLGVDVTTLVAALLHDVVEDGENVSLDQIKKEFGPEVARIVDGVTKV- 152
Query: 169 NNVNLKLQVLDD---ETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYL-----PRYQ 220
+N+N + D + + F D+R + + LA RL MR + Y+ RY+
Sbjct: 153 SNINAPIGRDQDSRKKIETIQKMFFAMAEDMRVIFVKLADRLHNMRTIHYVQDPEKKRYK 212
Query: 221 QLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLID 280
+ E ++I+APLAH + + ELEDL+F+ L+P Y + + + +
Sbjct: 213 ----AYETLEIYAPLAHKLGIYSIKSELEDLAFKVLYPEEYYKIKELVAEKRKEREKRTN 268
Query: 281 IYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIK 340
Y L L+ A V+GRYK YS +K+ + G+ EE+ D++ LRVI+K
Sbjct: 269 EYISLLKSALEEHKIKA------IVEGRYKHYYSIWRKMKEKGKKFEEIYDLIALRVIVK 322
Query: 341 PSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGK 400
+ CYT I+ ++WK +P R KDYIA PK+NGYRSLH V G
Sbjct: 323 DVTT-----------CYTVLGIVHNIWKPLPGRFKDYIAAPKSNGYRSLHTTV---ITGY 368
Query: 401 TRPLMEIQIRTEEMDMLAVNGTASHAFYK 429
PL EIQIR EEM A G +H YK
Sbjct: 369 GEPL-EIQIRDEEMHREAEYGLIAHWIYK 396
>gi|72162489|ref|YP_290146.1| RelA/SpoT protein [Thermobifida fusca YX]
gi|71916221|gb|AAZ56123.1| RelA/SpoT protein [Thermobifida fusca YX]
Length = 814
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 168/331 (50%), Gaps = 27/331 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LA+L M I+AGLL VE ++ Q+R G A L+ ++
Sbjct: 139 ITHPLAVATILAELGMQEATIAAGLLHDTVEDTEYTLDQLRSDFGDEIAELVDGVTKLD- 197
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
K++ + A +RK + DIR L++ L RL MR L YLP+ ++ + E
Sbjct: 198 ----KVKYGEATQAETVRKMVVAMARDIRVLVIKLCDRLHNMRTLRYLPQAKREKKARET 253
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+APLAH + N + +ELEDL+F L+P + + + P D+Y +++++
Sbjct: 254 LEIYAPLAHRLGMNTIKWELEDLAFATLYPKRFDEIARLVAER----APRRDVYLQEVIE 309
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ D A + +V+GR K YS +K++ +E+ D++G+RVI+
Sbjct: 310 IVSADLREAKI--KATVRGRPKHYYSIYQKMIARNVGFDEIYDLVGIRVIVD-------- 359
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY II + W +P R KDYIA PK N Y+SLH V + G +E+Q
Sbjct: 360 ---SVRDCYAALGIIHARWNPVPGRFKDYIAMPKFNMYQSLHTTV-IGPEGSP---VELQ 412
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAK 439
IRT M A G A+H YK N +AK
Sbjct: 413 IRTRAMHRRAEYGIAAHWKYKEERNNGGKAK 443
>gi|402837012|ref|ZP_10885543.1| putative GTP diphosphokinase [Mogibacterium sp. CM50]
gi|402270028|gb|EJU19297.1| putative GTP diphosphokinase [Mogibacterium sp. CM50]
Length = 732
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/354 (31%), Positives = 180/354 (50%), Gaps = 26/354 (7%)
Query: 85 LLFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGV 144
L+ KA +++ L S L + ++V+ +LA MD E I AGL+ VVE
Sbjct: 28 LVVKAFEIA-NRLHSGQLRKSGEPYIIHPIAVSFILATFGMDTETIIAGLMHDVVEDTPY 86
Query: 145 SIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRK-FCLTYYDIRALILDL 203
+ +Q+ + G A L+ ++ N +K ++ A RK F DIR LI+ L
Sbjct: 87 TREQLVEDFGEEIALLVDGVTKLGN---IKYDSKEELQAENFRKMFLAMSKDIRVLIIKL 143
Query: 204 AIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLF 263
A RL MR L+Y+P ++ +LE ++I+APLA + + FELEDL+ YL P Y
Sbjct: 144 ADRLHNMRTLEYMPTTKREEKALETLEIYAPLAGRLGIYSIKFELEDLALMYLHPTEYRE 203
Query: 264 VDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDG 323
+ + + ++ +QL+ +K A++ + V GR K YS KK++
Sbjct: 204 LSNKVNKRRQSREAVV----QQLITEIKAGLDKANI--EYEVTGRSKHLYSIYKKMVIQK 257
Query: 324 RIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKA 383
+ +E+ D+ +RVI+ N+ + CY T ++ + W +P R KDYIA PK
Sbjct: 258 KQLDEIFDLTAIRVIV---DNI--------KDCYATLGLVHTRWTPIPGRFKDYIAMPKP 306
Query: 384 NGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
N Y+S+H V + D G EIQIRT+EM +A G A+H YK G ++ ++
Sbjct: 307 NMYQSIHTTV-LDDEGNP---FEIQIRTKEMHRIAEYGIAAHWKYKEGKSDSKQ 356
>gi|284044641|ref|YP_003394981.1| (p)ppGpp synthetase I SpoT/RelA [Conexibacter woesei DSM 14684]
gi|283948862|gb|ADB51606.1| (p)ppGpp synthetase I, SpoT/RelA [Conexibacter woesei DSM 14684]
Length = 714
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 164/333 (49%), Gaps = 31/333 (9%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA + A +++D E + A LL VE S++ V+D+ G A L+ ++ L
Sbjct: 35 VGVAKICAGMRLDTETLVAALLHDTVEDTSASLEDVQDKFGEEIAGLVDGVTKL---TGL 91
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
D+ A RK + DIR +++ LA RL MR ++ +P+ +Q+ + E + I+
Sbjct: 92 TFSSRDEAQAENYRKMMVAMASDIRVILIKLADRLHNMRTIEAMPKQKQIEKAKETLDIY 151
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLID---IYKEQLLQC 289
AP+AH + + + +ELEDL+F L P Y + + T + ++ + + L
Sbjct: 152 APIAHRLGIHAIKWELEDLAFATLHPRKYTEIKGLVNQQRTERERYVNEAGAFVSKELDA 211
Query: 290 LKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTS 349
L A + GR K YS K+ + GR E+ D+ +RVI+ +
Sbjct: 212 LGIHA---------EISGRAKHFYSIYSKMTRKGREFNEIYDLTAMRVIVDSVKD----- 257
Query: 350 EVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQI 409
CY +I SLWK +P R KD++A PK N Y+SLH V + G RPL EIQI
Sbjct: 258 ------CYGAVGVIHSLWKPLPGRFKDFVAMPKFNMYQSLHTTV-IGPEG--RPL-EIQI 307
Query: 410 RTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLK 442
RT EM +A G A+H YK T+ E +LK
Sbjct: 308 RTREMHDMAEFGIAAHWIYKQDPTSSEGDGKLK 340
>gi|407720009|ref|YP_006839671.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein
[Sinorhizobium meliloti Rm41]
gi|407318241|emb|CCM66845.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein
[Sinorhizobium meliloti Rm41]
Length = 741
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 165/323 (51%), Gaps = 28/323 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ L VA +L ++ +D I+ LL +E + Q++ D G L+ ++K
Sbjct: 46 ISHPLEVAAILTEMHLDESTIAVALLHDTIEDTTATRQEIDDLFGEDIGALVEGLTKIKK 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L L + A LRK L D +R L++ LA RL MR LD++ ++ IS E
Sbjct: 106 ---LDLVTKKAKQAENLRKLLLAISDDVRVLLVKLADRLHNMRTLDHMSAEKRARISEET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M I+APLA + + ELE+LSFR++ P +Y V L+ ++ LI +E+L +
Sbjct: 163 MDIYAPLAGRMGMQDMREELENLSFRHINPEAYETVTRRLQELSERNEGLIKKIEEELSE 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIK--PSSNLV 346
L+ A+ + D V+GR K YS +K+ E+++DV G R+I+ PS
Sbjct: 223 LLQ-----AEGLTDAQVRGRQKKPYSVFRKMQSKSLSFEQLSDVWGFRIIVNDIPS---- 273
Query: 347 NTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLME 406
CY I+ + W+ +P R KDY++ PK N Y+S+H + G +R +E
Sbjct: 274 ---------CYRALGIVHTRWRVVPGRFKDYVSTPKQNDYQSIHTTI----IGPSRQRIE 320
Query: 407 IQIRTEEMDMLAVNGTASHAFYK 429
+QIRT+ M +A G A+HA YK
Sbjct: 321 LQIRTKRMHEIAEYGIAAHALYK 343
>gi|329767283|ref|ZP_08258809.1| hypothetical protein HMPREF0428_00506 [Gemella haemolysans M341]
gi|328836205|gb|EGF85875.1| hypothetical protein HMPREF0428_00506 [Gemella haemolysans M341]
Length = 725
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 161/319 (50%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L +L++D I AG L VVE + +++ G A ++ ++ +
Sbjct: 55 VQVAGILTELKLDYATICAGFLHDVVEDTKYTFDDIKETFGEDIAVIVDGVTKLDK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + A RK F D+R + + LA RL MR + Y+ +Q IS E ++I+
Sbjct: 112 KFRSKKQSQAENHRKLFVSIAKDLRVIFVKLADRLHNMRTMKYMREEKQREISSETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED S RYL P Y + ++ + + I C
Sbjct: 172 APLAHRLGISSVKWELEDTSLRYLHPSQYFSIVGMMKQKRSAREESIKD------ACSSI 225
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ LA+ V GR K YS KK++K + +++ D+L +RV++ ++
Sbjct: 226 TSILAENNIKAQVTGRPKHIYSIYKKMVKQNKTFDQIYDLLAVRVLVDSVAD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY T ++ +LW +P R KDYIA PK N Y+SLH V ++ +G+T +E+QIRT
Sbjct: 278 ---CYATLGLVNNLWVPIPGRIKDYIAMPKPNMYQSLHTTV-IAPDGQT---LEVQIRTY 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 331 EMHEIAEKGIAAHWAYKEG 349
>gi|421766534|ref|ZP_16203306.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Lactococcus garvieae
DCC43]
gi|407625044|gb|EKF51769.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Lactococcus garvieae
DCC43]
Length = 741
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 132/447 (29%), Positives = 209/447 (46%), Gaps = 64/447 (14%)
Query: 53 PSTAGEKMVVKLVGAFNELTERMNVLSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTK 112
P+ G++ VVKL A+ ++ L+ KALK + + + +
Sbjct: 5 PNFTGDQ-VVKLASAY---------MNEKDILLVRKALKCA-SIAHAEQYRASGEPYIIH 53
Query: 113 ALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVN 172
+ VA +LA LQ+DA +SAG L VVE + + G A+++ ++
Sbjct: 54 PIQVAGILAKLQLDAVTVSAGFLHDVVEDTNFIQSDLVELFGEEIANIVDGVTKLGK--- 110
Query: 173 LKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKI 231
++ + +++ A RK + DIR +++ LA RL MR L L +Q IS E M I
Sbjct: 111 VEYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKNLRPDKQKRISSETMAI 170
Query: 232 HAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLK 291
+APLAH + + +ELEDLSFRYL + + + + L+ ++L + +K
Sbjct: 171 YAPLAHRLGIGSIKWELEDLSFRYLNETEFYRIRGLMNEKRAARENLVSEVIDKLNERMK 230
Query: 292 TDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEV 351
DA + D + GR K YS +K+ + +E+ D++ +R + +S++
Sbjct: 231 -DAQV-----DAEIYGRPKHIYSIYRKMHDKKKRFDEIYDLIAIRCLTDSTSDV------ 278
Query: 352 GERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRT 411
YTT I LWK MP R KDYIA PKANGY+S+H V G P ME QIRT
Sbjct: 279 -----YTTLGYIHDLWKPMPGRFKDYIANPKANGYQSVHTTV----YGPKGP-MEFQIRT 328
Query: 412 EEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFEFDW 471
EM +A G A+H YK G A + + +I T +W
Sbjct: 329 HEMHQIAEYGVAAHWAYKQGRK------------------AKVDVHEISET------LNW 364
Query: 472 RDRVFRLLDKNGDGRISIEELMEVMEE 498
+ + L +++GD S EE ++ ++E
Sbjct: 365 INELVELQEQSGD---SAEEFVKAVQE 388
>gi|239827847|ref|YP_002950471.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus sp. WCH70]
gi|239808140|gb|ACS25205.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. WCH70]
Length = 732
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 164/321 (51%), Gaps = 25/321 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL+MD I+AG L VVE + + + G A L+ ++ +
Sbjct: 55 IQVAGILVDLKMDPATIAAGFLHDVVEDTEATKEDLEREFGSEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP +Q I+ E ++I
Sbjct: 112 KYKSQEEQQAENHRKMFLAMAQDIRVILIKLADRLHNMRTLKHLPIEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ + Y E+++Q ++
Sbjct: 172 APLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAEREQ----YLEEVIQEVR- 226
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
L ++ + GR K YS +K++ + E+ D+L +R+I+ +
Sbjct: 227 -ERLNEVSIPCEISGRPKHIYSIYRKMVMQNKQFNEIYDLLAVRIIVNSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PK N Y+SLH V + G+ PL E+QIRT
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGE--PL-EVQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGGLT 433
EM +A G A+H YK G T
Sbjct: 331 EMHQIAEFGIAAHWAYKEGKT 351
>gi|228476468|ref|ZP_04061158.1| GTP pyrophosphokinase [Streptococcus salivarius SK126]
gi|228251889|gb|EEK10935.1| GTP pyrophosphokinase [Streptococcus salivarius SK126]
Length = 739
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 186/364 (51%), Gaps = 28/364 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL +DA ++ G L VVE ++ + G +++ ++ +
Sbjct: 55 IQVAGILADLHLDAVTVACGFLHDVVEDTEKTLDDLEADFGTDVRNIVDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E M+I+
Sbjct: 112 EYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED++FRYL + + ++ + L+D +++ +KT
Sbjct: 172 APLAHRLGISRIKWELEDMAFRYLNEVEFYKISHMMKEKRREREELVD----EIVDKIKT 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
LV D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 228 YTAEQGLVGD--VYGRPKHIYSIYRKMRDKKKRFDQIYDLIAIRCVMETHSDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PK+NGY+S+H V G P+ EIQIRT+
Sbjct: 279 ----YAMLGYIHELWRPMPGRFKDYIANPKSNGYQSIHTTV----YGPKGPI-EIQIRTK 329
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFEFDWR 472
EM +A G A+H YK G+ ++K M +L + L+D + + GF +
Sbjct: 330 EMHQVAEYGVAAHWAYKKGIKGKVDSKESALGMNWIKDL--VELQDASNGDAMGFVDSVK 387
Query: 473 DRVF 476
+ +F
Sbjct: 388 EDIF 391
>gi|15964818|ref|NP_385171.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein
[Sinorhizobium meliloti 1021]
gi|334315609|ref|YP_004548228.1| (p)ppGpp synthetase I SpoT/RelA [Sinorhizobium meliloti AK83]
gi|384528777|ref|YP_005712865.1| (p)ppGpp synthetase I SpoT/RelA [Sinorhizobium meliloti BL225C]
gi|384535182|ref|YP_005719267.1| putative GTP pyrophosphokinase (ATP:GTP 3'- pyrophosphotransferase)
protein [Sinorhizobium meliloti SM11]
gi|418400042|ref|ZP_12973586.1| (p)ppGpp synthetase I SpoT/RelA [Sinorhizobium meliloti CCNWSX0020]
gi|433612835|ref|YP_007189633.1| (p)ppGpp synthetase, RelA/SpoT family [Sinorhizobium meliloti GR4]
gi|11321260|gb|AAG34109.1|AF306550_1 (p)ppGpp synthetase [Sinorhizobium meliloti]
gi|15073997|emb|CAC45644.1| Putative GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)
[Sinorhizobium meliloti 1021]
gi|47716787|gb|AAT37571.1| RelA [Sinorhizobium meliloti]
gi|51451369|gb|AAU03121.1| RelA [Sinorhizobium meliloti]
gi|333810953|gb|AEG03622.1| (p)ppGpp synthetase I, SpoT/RelA [Sinorhizobium meliloti BL225C]
gi|334094603|gb|AEG52614.1| (p)ppGpp synthetase I, SpoT/RelA [Sinorhizobium meliloti AK83]
gi|336032074|gb|AEH78006.1| putative GTP pyrophosphokinase (ATP:GTP 3'- pyrophosphotransferase)
protein [Sinorhizobium meliloti SM11]
gi|359505940|gb|EHK78458.1| (p)ppGpp synthetase I SpoT/RelA [Sinorhizobium meliloti CCNWSX0020]
gi|429551025|gb|AGA06034.1| (p)ppGpp synthetase, RelA/SpoT family [Sinorhizobium meliloti GR4]
Length = 741
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 165/323 (51%), Gaps = 28/323 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ L VA +L ++ +D I+ LL +E + Q++ D G L+ ++K
Sbjct: 46 ISHPLEVAAILTEMHLDESTIAVALLHDTIEDTTATRQEIDDLFGEDIGALVEGLTKIKK 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L L + A LRK L D +R L++ LA RL MR LD++ ++ IS E
Sbjct: 106 ---LDLVTKKAKQAENLRKLLLAISDDVRVLLVKLADRLHNMRTLDHMSAEKRARISEET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M I+APLA + + ELE+LSFR++ P +Y V L+ ++ LI +E+L +
Sbjct: 163 MDIYAPLAGRMGMQDMREELENLSFRHINPEAYETVTRRLQELSERNEGLIKKIEEELSE 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIK--PSSNLV 346
L+ A+ + D V+GR K YS +K+ E+++DV G R+I+ PS
Sbjct: 223 LLQ-----AEGLTDAQVRGRQKKPYSVFRKMQSKSLSFEQLSDVWGFRIIVNDIPS---- 273
Query: 347 NTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLME 406
CY I+ + W+ +P R KDY++ PK N Y+S+H + G +R +E
Sbjct: 274 ---------CYRALGIVHTRWRVVPGRFKDYVSTPKQNDYQSIHTTI----IGPSRQRIE 320
Query: 407 IQIRTEEMDMLAVNGTASHAFYK 429
+QIRT+ M +A G A+HA YK
Sbjct: 321 LQIRTKRMHEIAEYGIAAHALYK 343
>gi|322373769|ref|ZP_08048304.1| GTP pyrophosphokinase [Streptococcus sp. C150]
gi|321277141|gb|EFX54211.1| GTP pyrophosphokinase [Streptococcus sp. C150]
Length = 739
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 187/364 (51%), Gaps = 28/364 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL +DA ++ G L VVE ++ + G+ +++ ++ +
Sbjct: 55 IQVAGILADLHLDAVTVACGFLHDVVEDTEKTLDDLEADFGLDVRNIVDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E M+I+
Sbjct: 112 EYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED++FRYL + + ++ + L+D ++ +KT
Sbjct: 172 APLAHRLGISRIKWELEDMAFRYLNEVEFYKISHMMKEKRREREELVD----DIVAKIKT 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ LV D + GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 228 YTSEQGLVGD--IYGRPKHIYSIYRKMRDKKKRFDQIYDLIAIRCVMETHSDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PK+NGY+S+H V G P+ EIQIRT+
Sbjct: 279 ----YAMLGYIHELWRPMPGRFKDYIANPKSNGYQSIHTTV----YGPKGPI-EIQIRTK 329
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFEFDWR 472
EM +A G A+H YK G+ ++K M +L + L+D + + GF +
Sbjct: 330 EMHQVAEYGVAAHWAYKKGIKGKVDSKESALGMNWIKDL--VELQDASNGDAMGFVDSVK 387
Query: 473 DRVF 476
+ +F
Sbjct: 388 EDIF 391
>gi|189911774|ref|YP_001963329.1| GTP pyrophosphokinase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167776450|gb|ABZ94751.1| GTP pyrophosphokinase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
Length = 684
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/317 (33%), Positives = 166/317 (52%), Gaps = 25/317 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
++VA +L +L +D I+AGLL VVE + + + G A L+ ++ +
Sbjct: 56 MNVASVLDELGLDERAIAAGLLHDVVEDTSYTKEDMAREFGEDIAALVEGVTKISE---I 112
Query: 174 KLQVLDDETAAALRKFCL-TYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K Q + E A +RK L T D+R +++ LA + +R L + P +Q I+ EV+ ++
Sbjct: 113 KSQSKETEAAENIRKMLLATIKDVRVMLIKLADKTHNVRTLKFQPEEKQKRIAKEVLSLY 172
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+A + + FELEDL+F+ L P Y + + + K D Y E++ LK
Sbjct: 173 APIAGRLGVYKVKFELEDLAFQSLHPDEYQEI----KKRVSAKKSERDEYIEKIKIILKQ 228
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
LA++ D + GR K YS +K++ + E+ D+ +R+I +E+
Sbjct: 229 --RLAEINIDARIDGRAKHFYSIYRKMVTKEKSFSEIFDLRAVRII---------ANEI- 276
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY I+ +LW +P R KDYIA PK N Y+SLH V D RP ME+QIRT+
Sbjct: 277 -KDCYGVLGIVHTLWTPIPGRFKDYIATPKTNLYQSLHTTVFGPDG---RP-MEVQIRTK 331
Query: 413 EMDMLAVNGTASHAFYK 429
EM+ +A NG A+H YK
Sbjct: 332 EMNAIAENGVAAHWAYK 348
>gi|251780257|ref|ZP_04823177.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243084572|gb|EES50462.1| RelA/SpoT family protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 728
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 173/328 (52%), Gaps = 25/328 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L MD I+AGLL V+E S + ++ A+L++ ++ +
Sbjct: 48 IDVAEILAELGMDTSTIAAGLLHDVIEDTTCSYESMKTIFNEEIANLVNGVTKLGK---I 104
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A +RK L DIR +I+ LA RL MR L ++ + +Q + + E + I+
Sbjct: 105 QYKTKEEQQADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKFMTKGKQKLKAKETLDIY 164
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELEDLSFRYL Y + + + I+ +++ LK
Sbjct: 165 APLAHRLGMSKIKWELEDLSFRYLHEDEYYQLVEQIAEKRVERETYIN----EVVCYLKE 220
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ + D ++GR K YS KK++ + E++ D+ +R+ LVN+
Sbjct: 221 KLDESGI--DSDIEGRPKHFYSIYKKMINKNKSIEQIFDLTAIRI-------LVNSV--- 268
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY I+ +++K +P R KDYIA PK N Y+SLH V + + GKT EIQIRT
Sbjct: 269 -KDCYGVLGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTV-IGNQGKT---FEIQIRTF 323
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKR 440
EM A G A+H YK G N E+ +
Sbjct: 324 EMHKTAEYGIAAHWKYKEGDKNEEDKAK 351
>gi|210632535|ref|ZP_03297445.1| hypothetical protein COLSTE_01347 [Collinsella stercoris DSM 13279]
gi|210159482|gb|EEA90453.1| RelA/SpoT family protein [Collinsella stercoris DSM 13279]
Length = 796
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 166/321 (51%), Gaps = 26/321 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA++LA+L+MD +V+ A LL VE S+ V G A L+ ++ N+
Sbjct: 93 VEVAIILAELKMDCDVVCAALLHDTVEDTTTSLDDVTTYFGETVAELVDGVTKL---TNI 149
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ +D++ A LRK F DIR +I+ LA RL MR L L ++L + E M ++
Sbjct: 150 DVDTMDEKQALNLRKMFLAMSRDIRVVIVKLADRLHNMRTLAALREDRRLFKARETMDVY 209
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + + +ELEDLSF YL P +Y + + + S+ + + + + ++ L
Sbjct: 210 APLADRLGMSSIKWELEDLSFFYLEPEAYQRIARMV----SESREVRERFLTETIKALDD 265
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ LV + GR K +S +K+ + G+ E+ D++ LRVI T+ +
Sbjct: 266 ELKHVGLV-GYQIAGRSKHYWSIYQKMKRKGKEFSEIYDLVALRVI---------TNSIA 315
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY+ SLW MP R KDYI PKAN Y+SLH V G T +EIQIRT
Sbjct: 316 D--CYSALGAAHSLWTPMPGRFKDYINMPKANNYQSLHTTV----IGPTARPLEIQIRTY 369
Query: 413 EMDMLAVNGTASHAFYK--GG 431
EM A G A+H YK GG
Sbjct: 370 EMHEQAEYGIAAHWLYKRSGG 390
>gi|297537283|ref|YP_003673052.1| (p)ppGpp synthetase I SpoT/RelA [Methylotenera versatilis 301]
gi|297256630|gb|ADI28475.1| (p)ppGpp synthetase I, SpoT/RelA [Methylotenera versatilis 301]
Length = 764
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/322 (31%), Positives = 163/322 (50%), Gaps = 25/322 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T +SVA +LADL +D + A LL VVE VS ++++ G+ A L+ ++
Sbjct: 73 ITHPVSVACILADLHLDVPTLLAALLHDVVEDTDVSTHDIKEKFGLQVAELVDGVTKLDK 132
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ Q A RK L D+R +++ LA RL M+ L+ + +Q +I+ E
Sbjct: 133 ---IEFQSASVAQAENFRKMLLAMSQDVRVILVKLADRLHNMQTLEAMRPEKQKLIAKET 189
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + N + LEDLSF+YL+P + + + + K ++ E + Q
Sbjct: 190 LEIYAPIANRLGLNDIYQSLEDLSFQYLYPMRFRAISKAILAARGNRKEVVSKILESIKQ 249
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L T L D V GR K YS KK+ ++ D+ G RV++K S
Sbjct: 250 QLIT------LNIDAEVSGREKHLYSIYKKMSGKTTAFSQIYDIYGFRVVVKDLS----- 298
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
+CY + +L+K +P + KDYIA PKANGY+SLH + G +E+Q
Sbjct: 299 ------SCYLALGALHALYKPIPSKFKDYIAIPKANGYQSLHTTL----FGPFGTPIEVQ 348
Query: 409 IRTEEMDMLAVNGTASHAFYKG 430
IR+ EM +A G A+H YK
Sbjct: 349 IRSTEMHNIADAGVAAHWLYKA 370
>gi|388258655|ref|ZP_10135830.1| GTP pyrophosphokinase [Cellvibrio sp. BR]
gi|387937414|gb|EIK43970.1| GTP pyrophosphokinase [Cellvibrio sp. BR]
Length = 748
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 170/327 (51%), Gaps = 31/327 (9%)
Query: 113 ALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVN 172
L +A +LADLQ+D + + A +L + V +++ ++++R G A L+ LR+ ++
Sbjct: 70 GLEMAEILADLQLDQDALVAAILYRAVREHKITLVELQNRFGETVAKLVKGVLRMAA-IS 128
Query: 173 LKLQVLDD--------ETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLM 223
+ +D E A +RK ++ D +R ++ LA R +R + ++
Sbjct: 129 YQRNEHEDRVLGSQAVEQAEKIRKMLVSMVDDVRVALIKLAERTCAIRSVKNAEADRRRQ 188
Query: 224 ISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYK 283
++ EV I+APLAH + ++ +ELEDLSFRYL P Y + L + ID
Sbjct: 189 VAREVADIYAPLAHRLGIGHIKWELEDLSFRYLQPEDYKRIAKLLDERRLARQEYID--- 245
Query: 284 EQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSS 343
+LL+ L+++ A + + SV GR K YS +K+ + G +V D+ +R+++ P+
Sbjct: 246 -KLLERLRSELKKAGI--EGSVGGRAKHIYSIWRKMQRKGIPFSQVYDIRAVRILV-PTV 301
Query: 344 NLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRP 403
R CY I+ SLW+ +PH DYIA PK NGYRSLH AV G
Sbjct: 302 ----------RDCYAVLGIVHSLWRNIPHEFDDYIASPKENGYRSLHTAV----WGPENK 347
Query: 404 LMEIQIRTEEMDMLAVNGTASHAFYKG 430
++EIQIRT+EM + G +H YKG
Sbjct: 348 VLEIQIRTQEMHEESELGVCAHWRYKG 374
>gi|238018954|ref|ZP_04599380.1| hypothetical protein VEIDISOL_00814 [Veillonella dispar ATCC 17748]
gi|237864438|gb|EEP65728.1| hypothetical protein VEIDISOL_00814 [Veillonella dispar ATCC 17748]
Length = 746
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 162/325 (49%), Gaps = 25/325 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA +LA LQ+D + A L+ VVE S + + G A L+ ++
Sbjct: 69 LAVAEILAHLQIDHITLMAALMHDVVEDTSYSKEDLEKMFGSEVAFLVDGVTKLNQ---F 125
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +D RK L D+R +++ LA RL MR L ++ +Q I+ E ++I
Sbjct: 126 QYETKEDRQMENYRKMILAMAKDVRVVVIKLADRLHNMRTLKHMRSDKQKRIAKETLEIF 185
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + +ELEDLSFRYL P Y + ++ + +++ QL + L
Sbjct: 186 APLAHRLGIFNVKWELEDLSFRYLEPEKYYDLVDQMKQKRQAREDIVNDTMSQLTKALGE 245
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
AD ++GR K YS KK+ KD R ++ D+L +RVI+ +
Sbjct: 246 AHIKAD------IKGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDTIPD-------- 291
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I SLWK +P+R KDYI+ PK+N Y+SLH V G +EIQIRT
Sbjct: 292 ---CYAVLGIAHSLWKPLPYRFKDYISMPKSNMYQSLHTTV----IGTMGQPVEIQIRTW 344
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEE 437
EM ++ G A+H YK G N ++
Sbjct: 345 EMHRVSEYGVAAHWRYKEGNKNGDK 369
>gi|398806933|ref|ZP_10565828.1| (p)ppGpp synthetase, RelA/SpoT family [Polaromonas sp. CF318]
gi|398086767|gb|EJL77375.1| (p)ppGpp synthetase, RelA/SpoT family [Polaromonas sp. CF318]
Length = 745
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 173/333 (51%), Gaps = 25/333 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++VA A+ ++DA+ + A LL +E GV+ ++ DR G A L+ +++
Sbjct: 63 ITHPIAVAQQCAEWKLDAQALMAALLHDAIEDCGVTKPELIDRFGAPVAELVDGLTKLEK 122
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+ ++ A + RK L D+R +++ LA R MR L +PR + IS E
Sbjct: 123 ---LEFNTREENQAESFRKMLLAMARDVRVILIKLADRTHNMRTLGDVPRAKWTRISRET 179
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+AP+AH + N EL+DLSF++L P+ Y + L+ + +I + ++
Sbjct: 180 LDIYAPIAHRLGLNTTYRELQDLSFQHLHPWRYATLTKALQKARGRRRDVIKRVQGEV-- 237
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
++ ++ V + GR K+ YS +K+ + +V D+ G RVI+K +
Sbjct: 238 ----ESAFSNAQVPVVISGREKTLYSIYRKMDEKHLSFAQVTDLYGFRVIVKDLT----- 288
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
ACYT ++ L+K +P + KDYIA PK NGY+SLH + V G +E Q
Sbjct: 289 ------ACYTAMGVLHQLYKPLPGKFKDYIAIPKINGYQSLHTTL-VGPFGTN---IEFQ 338
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRL 441
+RTE M ++A +G A+H YK + + ++RL
Sbjct: 339 MRTEAMHVVAESGVAAHWLYKATDPDSDASQRL 371
>gi|409197987|ref|ZP_11226650.1| (p)ppGpp synthetase I, SpoT/RelA [Marinilabilia salmonicolor JCM
21150]
Length = 741
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 194/372 (52%), Gaps = 33/372 (8%)
Query: 68 FNELTERM-NVLSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLAD-LQM 125
FNEL E S+ + RL+ KA +L+ + + L L+VA ++AD + +
Sbjct: 17 FNELLELCPRCQSAEAKRLIQKAFELANEAHRGVRRKSGELYIL-HPLAVARIVADEIGL 75
Query: 126 DAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDET--- 182
A+ ++A LL VVE +++ + G A ++ + L KL+ + D+T
Sbjct: 76 GAKGVAAALLHDVVEDTDYTLEDIEGIFGKKVADIV-DGL-------TKLEGVFDQTQSK 127
Query: 183 -AAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVA 240
A RK LT DIR +++ LA RL MR LD +P +++L I+ E + ++APLAH +
Sbjct: 128 QAENFRKLLLTMVEDIRVILIKLADRLHNMRTLDSMPEHKRLKIAGETLYMYAPLAHRLG 187
Query: 241 TNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLV 300
+ ELEDL+F+Y P + + L ++ ++ LI + +++ L +
Sbjct: 188 LYSIKSELEDLAFKYEHPKIFEEISAKLEDYKDKTQHLITRFSLPIIERLSREGY----- 242
Query: 301 EDVSVQGRYKSRYSTMKKLLKDGRIP-EEVNDVLGLRVIIKPSSNLVNTSEVGERACYTT 359
D ++GR KS YS +K+ + +IP EE+ D+L +R++ P + ++ C+T
Sbjct: 243 -DFDLKGRPKSIYSIWRKMQRK-QIPFEEIYDLLAIRIVFTPKEGIPEKAQ-----CWTI 295
Query: 360 REIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAV 419
+I ++K P R +D+++ PKANGY +LH + G +EIQIRTE MD +A
Sbjct: 296 YSLITDIYKPKPDRLRDWVSTPKANGYEALHATL----MGPEGNWIEIQIRTERMDEIAE 351
Query: 420 NGTASHAFYKGG 431
G A+H YKG
Sbjct: 352 KGFAAHWKYKGA 363
>gi|337750627|ref|YP_004644789.1| RelA protein [Paenibacillus mucilaginosus KNP414]
gi|379723680|ref|YP_005315811.1| RelA protein [Paenibacillus mucilaginosus 3016]
gi|386726431|ref|YP_006192757.1| RelA protein [Paenibacillus mucilaginosus K02]
gi|336301816|gb|AEI44919.1| RelA [Paenibacillus mucilaginosus KNP414]
gi|378572352|gb|AFC32662.1| RelA [Paenibacillus mucilaginosus 3016]
gi|384093556|gb|AFH64992.1| RelA protein [Paenibacillus mucilaginosus K02]
Length = 730
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 166/325 (51%), Gaps = 29/325 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA +L ++QMD I A LL VVE VS++ V ++ G A ++ +++ +
Sbjct: 49 LAVAEILVNMQMDTTSIIAALLHDVVEDTTVSLETVHEKFGATCAMIVDGLTKLEK---I 105
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + ++ RK F DIR +++ LA RL MR L + Q I+ E ++I
Sbjct: 106 KFKSKEEHQNENYRKMFVAMAQDIRVILIKLADRLHNMRTLKHQSEEAQRRIADETLEIF 165
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
P+AH + + + +E+ED++ RYL P Y + ++ T +EQ + + T
Sbjct: 166 CPIAHRLGISAIKWEMEDIALRYLNPQQYYRIVNLMQKKRTE--------REQYINDVIT 217
Query: 293 DAT--LADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSE 350
+ L ++ D + GR K YS KK+ + E+ D+L LR+I+ N+
Sbjct: 218 NVKEKLHEMGIDGDISGRPKHIYSIYKKMTVRSKQFNEIYDLLALRIIV---DNI----- 269
Query: 351 VGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIR 410
+ CY T II +LWK MP R KDYIA PK N Y+SLH V + G+ PL E+QIR
Sbjct: 270 ---KDCYATLGIIHTLWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGE--PL-EVQIR 322
Query: 411 TEEMDMLAVNGTASHAFYKGGLTNP 435
T EM + G A+H YK G P
Sbjct: 323 TFEMHRTSEYGVAAHWAYKEGTNVP 347
>gi|39997334|ref|NP_953285.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
[Geobacter sulfurreducens PCA]
gi|409912678|ref|YP_006891143.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
[Geobacter sulfurreducens KN400]
gi|39984225|gb|AAR35612.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
[Geobacter sulfurreducens PCA]
gi|298506271|gb|ADI84994.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
[Geobacter sulfurreducens KN400]
Length = 716
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/334 (33%), Positives = 168/334 (50%), Gaps = 26/334 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L + VA +LADL++D + GLL +E + +++ G A+L+ ++
Sbjct: 46 LVHPMEVAGVLADLKLDVPTVVTGLLHDTIEDTLTTREELEGMFGAEVANLVDGVTKIGK 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + ++ A RK L DIR +++ LA RL MR L Y P +Q IS E
Sbjct: 106 ---IHFKTKEESQAENFRKMLLAMANDIRVILVKLADRLHNMRTLQYQPEPKQRSISRET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+APLA+ + +++ ELEDLSFRYL P ++ D L S K + Y E++ Q
Sbjct: 163 LDIYAPLANRLGISWIKSELEDLSFRYLEP--QIYYD--LASKVAKKKKERESYVEEVRQ 218
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ + DL DV GR K YS +K+ +++ D++ +RV++
Sbjct: 219 IIVSKLAEHDLKGDVF--GRSKHLYSIWRKMQARNVDIDQIYDLVAIRVMVNDI------ 270
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY II S WK +P R KDYIA PK N Y+SLH V + +G+ ME+Q
Sbjct: 271 -----RECYEVLGIIHSTWKPIPGRFKDYIAMPKGNMYQSLHTTV-IGPHGER---MEVQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPE-EAKRL 441
IRT +M +A G A+H YK G E E KR
Sbjct: 322 IRTSDMHRVAEAGIAAHWKYKEGKGYDEKEVKRF 355
>gi|299066252|emb|CBJ37436.1| putative bifunctional: (p)ppGpp synthetase II; guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase; precursor (spoT)
[Ralstonia solanacearum CMR15]
Length = 770
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 190/395 (48%), Gaps = 32/395 (8%)
Query: 48 SPAPLPSTAGEKMVVKLVGAFNELTERMNVLSSSSSRLLFKALKLSIPMLQSLPLSPDSR 107
P P+ + VV + G LTE+++ L + +L+ +A S L S
Sbjct: 38 GPTSQPAAPPRQQVVSIAG----LTEKLSYLKPADIKLVKEAFHFSDEA--HLGQYRQSG 91
Query: 108 SP-LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLR 166
P +T ++VA + A ++D + I A LL V+E GV+ ++ ++ G A L+ +
Sbjct: 92 EPYITHPVAVAEICAGWKLDVQSIMAALLHDVIEDQGVTKSELAEKFGPKVAELVDGLTK 151
Query: 167 VKNNVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMIS 225
+ L+ Q + A + RK L D+R +++ LA R MR LD++P ++ I+
Sbjct: 152 LDK---LEFQSREQAQAESFRKMLLAMARDVRVILVKLADRTHNMRTLDHVPPEKRRRIA 208
Query: 226 LEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQ 285
E M+I+AP+AH + N EL++LSFR PF Y ++ +++ + ++ E
Sbjct: 209 GETMEIYAPIAHRLGLNTTYRELQELSFRIGSPFRYATLEKAVKAARGNRREVVSRILEA 268
Query: 286 LLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNL 345
+ L A+L GR K+ YS +K+ +V DV G RV+++ +
Sbjct: 269 AQRALGDAGVSAELT------GREKTLYSIYRKMHDKQLSFSQVLDVYGFRVVVETQMH- 321
Query: 346 VNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLM 405
CY + L+K MP + KDYIA PK NGY+S+H + G +
Sbjct: 322 ----------CYMAVGALHGLYKPMPGKFKDYIAIPKINGYQSVHTTL----VGPFGTPV 367
Query: 406 EIQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKR 440
E QIRT EM+ +A G A+H YK P+ A++
Sbjct: 368 EFQIRTREMNQIAEAGVAAHWMYKQHHDEPDRAQQ 402
>gi|257870870|ref|ZP_05650523.1| RelA/SpoT protein [Enterococcus gallinarum EG2]
gi|357051393|ref|ZP_09112586.1| GTP pyrophosphokinase [Enterococcus saccharolyticus 30_1]
gi|257805034|gb|EEV33856.1| RelA/SpoT protein [Enterococcus gallinarum EG2]
gi|355379902|gb|EHG27051.1| GTP pyrophosphokinase [Enterococcus saccharolyticus 30_1]
Length = 736
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 166/329 (50%), Gaps = 25/329 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+LQMD ++ G L VVE V++ +++ G A L+ ++ +
Sbjct: 55 IQVAGILAELQMDPHTVATGFLHDVVEDTEVTLADLKEVFGADVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK + D+R +++ LA RL MR L +L +Q I+ E M+I+
Sbjct: 112 KYKSHEEQLAENHRKMLIAMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED+S RYL P Y + +++ + + EQ+ +
Sbjct: 172 APLAHRLGISRIKWELEDISLRYLNPQQYYRIVHLMQTKREEREAYVSETVEQIRLATEE 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
A+ + GR K YS +K+ + E+ D+L +RVI+ +
Sbjct: 232 LDIFAE------IYGRPKHIYSIYRKMKDQKKQFNEIYDLLAIRVIVDSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKAN Y+SLH V + G +EIQIRT
Sbjct: 278 ---CYAVLGTIHTKWKPMPGRFKDYIAMPKANMYQSLHTTV-IGPKGNP---VEIQIRTH 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRL 441
EM +A G A+H YK G T +A ++
Sbjct: 331 EMHEIAEFGVAAHWAYKEGRTEKVKADKM 359
>gi|19746884|ref|NP_608020.1| (p)ppGpp synthetase [Streptococcus pyogenes MGAS8232]
gi|19749128|gb|AAL98519.1| (p)ppGpp synthetase [Streptococcus pyogenes MGAS8232]
Length = 739
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 169/324 (52%), Gaps = 26/324 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +LADL +DA ++ G L VVE +++ ++ G ++ ++
Sbjct: 51 IVHPIQVAAILADLHLDAVTVACGFLHDVVEDTDITLDEIEADFGQDARDIVDGVTKLGK 110
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E
Sbjct: 111 ---VEYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRET 167
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLAH + + + +ELEDL+FRYL + + ++ + L+ E ++
Sbjct: 168 MEIYAPLAHRLGISRIKWELEDLAFRYLNETEFYKISHMMKEKRREREALV----EAIVS 223
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+KT T L D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 224 KVKTYTTQQGLFGD--VYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCVMETQSDV--- 278
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQ
Sbjct: 279 --------YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQ 325
Query: 409 IRTEEMDMLAVNGTASHAFYKGGL 432
IRT++M +A G A+H YK G+
Sbjct: 326 IRTKDMHQVAEYGVAAHWAYKKGV 349
>gi|145594359|ref|YP_001158656.1| RelA/SpoT family protein [Salinispora tropica CNB-440]
gi|145303696|gb|ABP54278.1| RelA/SpoT family protein [Salinispora tropica CNB-440]
Length = 815
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 168/321 (52%), Gaps = 27/321 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LA+L MD + A LL +E ++ Q+R G G LL + + +
Sbjct: 134 ITHPLAVATILANLGMDTTTLVAALLHDTIEDTEYTLDQMRADFG-GEVALLVDGVTKLD 192
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
V L D A +RK + D R L++ LA RL MR L +LPR +Q + E
Sbjct: 193 KVKLG----DAAKAETIRKMVVAMAKDPRVLVIKLADRLHNMRTLIFLPRPKQEQKAKET 248
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I APLAH + N + +ELEDL+F LFP + ++ + H+ + L+ Q+ +
Sbjct: 249 LEILAPLAHRLGMNTIKWELEDLAFGTLFPKRFEEINRLIGEHQPQREALL----RQVTR 304
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ TD A + +V+ GR K YS +K++ GR ++ D++G+R+ LV+T
Sbjct: 305 KVGTDLKSAKIRAEVT--GRPKHLYSIYQKMIVRGRDFNDIYDLVGVRI-------LVDT 355
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY +I + W+ +P R KDYIA PK N Y+SLH V + GK +E+Q
Sbjct: 356 V----RDCYAALGVIHANWQPVPGRFKDYIAMPKFNMYQSLHTTV-IGPTGKP---VEMQ 407
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT M A G A+H YK
Sbjct: 408 IRTYAMHRTAEFGIAAHWKYK 428
>gi|152985899|ref|YP_001349924.1| GTP pyrophosphokinase [Pseudomonas aeruginosa PA7]
gi|150961057|gb|ABR83082.1| GTP pyrophosphokinase [Pseudomonas aeruginosa PA7]
Length = 747
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/332 (32%), Positives = 161/332 (48%), Gaps = 27/332 (8%)
Query: 105 DSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHES 164
D S L +A +LADL++D E + A ++ + V G ++++ V R G A L+
Sbjct: 60 DGTSSFQTGLEIAEILADLKLDQESLVAAVIYRGVREGTITLEAVNKRFGPVVAKLIEGV 119
Query: 165 LR---VKNNVNLKLQVLDDETAAA--LRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPR 218
LR + ++N + ++ A LRK + D +R ++ LA R +R +
Sbjct: 120 LRMAAISASLNPRHSMVLGTQAQVENLRKMLVAMVDDVRVALIKLAERTCAIRAVKNADE 179
Query: 219 YQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPL 278
++ ++ EV I+APLAH + ++ +ELEDLSFRYL P Y + L +
Sbjct: 180 EKRHRVAREVFDIYAPLAHRLGIGHIKWELEDLSFRYLEPDQYKQIAKLLHERRLDREQY 239
Query: 279 IDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVI 338
I QL + L ADL GR K YS +K+ + G ++ DV +RV+
Sbjct: 240 IANVMSQLKEALAATGVQADL------SGRAKHIYSIWRKMQRKGLDFSQIYDVRAVRVL 293
Query: 339 IKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDN 398
+ R CYT I+ +LW+ +P DYIA PK NGYRSLH AV +
Sbjct: 294 VPEM-----------RDCYTALGIVHTLWRHIPKEFDDYIANPKENGYRSLHTAV-IGPE 341
Query: 399 GKTRPLMEIQIRTEEMDMLAVNGTASHAFYKG 430
GK ++E+QIRT M A G +H YKG
Sbjct: 342 GK---VLEVQIRTHSMHEEAELGVCAHWRYKG 370
>gi|312110098|ref|YP_003988414.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus sp. Y4.1MC1]
gi|336234522|ref|YP_004587138.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus thermoglucosidasius
C56-YS93]
gi|423719137|ref|ZP_17693319.1| (p)ppGpp synthetase I spoT/relA [Geobacillus thermoglucosidans
TNO-09.020]
gi|311215199|gb|ADP73803.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. Y4.1MC1]
gi|335361377|gb|AEH47057.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus thermoglucosidasius
C56-YS93]
gi|383368040|gb|EID45315.1| (p)ppGpp synthetase I spoT/relA [Geobacillus thermoglucosidans
TNO-09.020]
Length = 731
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 164/321 (51%), Gaps = 25/321 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL+MD I+AG L VVE + + + G A L+ ++ +
Sbjct: 55 IQVAGILVDLKMDPATIAAGFLHDVVEDTEATKEDLEREFGSEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP +Q I+ E ++I
Sbjct: 112 KYKSQEEQQAENHRKMFLAMAQDIRVILIKLADRLHNMRTLKHLPIEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ + Y E+++Q ++
Sbjct: 172 APLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAEREQ----YLEEVIQEVR- 226
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
L ++ + GR K YS +K++ + E+ D+L +R+I+ +
Sbjct: 227 -ERLNEVSIPCEIYGRPKHIYSIYRKMVMQNKQFNEIYDLLAVRIIVNSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PK N Y+SLH V + G+ PL E+QIRT
Sbjct: 278 ---CYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGE--PL-EVQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGGLT 433
EM +A G A+H YK G T
Sbjct: 331 EMHQIAEFGIAAHWAYKEGKT 351
>gi|408379289|ref|ZP_11176883.1| GTP pyrophosphohydrolase/synthetase [Agrobacterium albertimagni
AOL15]
gi|407746773|gb|EKF58295.1| GTP pyrophosphohydrolase/synthetase [Agrobacterium albertimagni
AOL15]
Length = 742
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/323 (31%), Positives = 162/323 (50%), Gaps = 24/323 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ L VA +L D+ +D I+ LL +E + ++ + G L+ ++K
Sbjct: 46 ISHPLEVAAILTDMHLDESTIAVALLHDTIEDTSATRAEIDELFGEDIGRLVEGLTKIKK 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L L + A LRK L D +R L++ LA RL MR L+++ ++ IS E
Sbjct: 106 ---LDLVTKKAKQAENLRKLLLAISDDVRVLLVKLADRLHNMRTLEHMRDDKRARISEET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLA + + ELEDLSFRY+ P +Y V L T ++ LI +++L +
Sbjct: 163 MEIYAPLAGRMGMQDMRDELEDLSFRYMNPEAYETVTNRLAELSTRNEGLITKIEDELRE 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L + L + SV+GR K YS +K+ E+++DV G R+++
Sbjct: 223 LLVANGLL-----NTSVKGRQKKPYSVFRKMQSKSLSFEQLSDVYGFRILVDDIP----- 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY I+ + W+ +P R KDYI+ PK N YRS+H + G +R +E+Q
Sbjct: 273 ------GCYRALGIVHTRWRVVPGRFKDYISTPKQNDYRSIHTTI----VGPSRQRIELQ 322
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IRT M +A G A+H+ YK G
Sbjct: 323 IRTRRMHDIAEYGIAAHSLYKDG 345
>gi|282857439|ref|ZP_06266672.1| GTP diphosphokinase [Pyramidobacter piscolens W5455]
gi|282584724|gb|EFB90059.1| GTP diphosphokinase [Pyramidobacter piscolens W5455]
Length = 816
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 178/362 (49%), Gaps = 32/362 (8%)
Query: 116 VALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKL 175
V +LAD++MD + AGLL V+E V+ ++++R G L+ ++ L
Sbjct: 149 VTSILADMRMDLPTLQAGLLHDVLEDTPVTADEMKNRFGATVEMLVDGVTKLGK---LPF 205
Query: 176 QVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAP 234
+ +D A LRK F + DIR +++ LA R MR L L R +Q I+ E ++I+AP
Sbjct: 206 KTFEDYQAENLRKMFLVMAKDIRVVLIKLADRTHNMRSLGALRRDKQQRIAKETLEIYAP 265
Query: 235 LAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDA 294
LAH + + LEDL+F+Y P Y + ++ + +++ E L + L++
Sbjct: 266 LAHRLGIYQVKRTLEDLAFKYYDPTMYYDIKRRVKKRLPEREAIVNQAMEVLGERLRSIG 325
Query: 295 TLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGER 354
A ++GR K YS +K+ + E++ D+L LRVI+ N V T
Sbjct: 326 IEA------HIKGRAKHFYSIFEKMNRKKLSVEQLYDLLALRVIV----NDVTT------ 369
Query: 355 ACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEM 414
CYT I+ +LWK +P + DYIA PK N YRSLH V G +E+QIRT EM
Sbjct: 370 -CYTVLGIVHTLWKPIPGQFDDYIANPKNNMYRSLHTTV----MGPQGEPLEVQIRTWEM 424
Query: 415 DMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFEFDWRDR 474
LA G A+H YK G + +E + E L++ P TN + F RD
Sbjct: 425 HWLAEYGVAAHWRYKEGQGHIDELDQ-------KLEWIRKTLENGPETNSQEFMERLRDD 477
Query: 475 VF 476
V
Sbjct: 478 VL 479
>gi|372270282|ref|ZP_09506330.1| GTP pyrophosphokinase [Marinobacterium stanieri S30]
Length = 758
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/326 (33%), Positives = 165/326 (50%), Gaps = 29/326 (8%)
Query: 113 ALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRV----- 167
L +A +LA+LQ D E + A +L + V +S+QQV++R G A L+ L++
Sbjct: 69 GLEMAQILAELQQDQETLVAAVLYRSVRERKLSLQQVQERFGATIAGLIDGVLQMAAIGS 128
Query: 168 KNNVNLKLQVLDDETAAA--LRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMI 224
+ N + VL TA +RK + D +R ++ +A R +R + R ++ ++
Sbjct: 129 RKNPRSEDSVLGASTAQIDNVRKMLVAMIDDVRVALIKIAERTCAIRGVKNSDRKKRYLV 188
Query: 225 SLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKE 284
+ EV I+APLAH + ++ +ELEDLSFRYL P Y + L + I+
Sbjct: 189 AREVFDIYAPLAHRLGIGHIKWELEDLSFRYLKPNDYKHIARLLDEKRLDRQLFIN---- 244
Query: 285 QLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSN 344
Q+++ L+ L D D V GR K YS +K+ + +V DV +R+++
Sbjct: 245 QVVELLRE--RLDDAHIDGEVMGRAKHIYSIWRKMQRKSIDFNQVYDVRAVRILV----- 297
Query: 345 LVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPL 404
E+ R CYT I+ LW+ +PH DYIA PK NGYRSLH AV G +
Sbjct: 298 ----PEI--RDCYTVLGIVHGLWRNIPHEFDDYIASPKPNGYRSLHTAV----FGPEGKV 347
Query: 405 MEIQIRTEEMDMLAVNGTASHAFYKG 430
+EIQIRT M A G +H YKG
Sbjct: 348 LEIQIRTFSMHEEAELGVCAHHLYKG 373
>gi|73542157|ref|YP_296677.1| RelA/SpoT protein [Ralstonia eutropha JMP134]
gi|72119570|gb|AAZ61833.1| RelA/SpoT protein [Ralstonia eutropha JMP134]
Length = 807
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 170/321 (52%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++VA L AD ++D + I A LL V+E G++ ++ ++ G A L+ ++
Sbjct: 131 ITHPVAVAELCADWRLDVQSIMAALLHDVMEDQGITKSELAEKFGPKVAELVDGLTKLDK 190
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+ Q + A + RK L D+R +++ LA R MR LD++P ++ I+LE
Sbjct: 191 ---LEFQSREQAQAESFRKMLLAMARDVRVILVKLADRTHNMRTLDFVPPEKRRRIALET 247
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+AP+AH + N + EL++LSF+ PF Y ++ +++ + ++ +++L+
Sbjct: 248 MEIYAPIAHRLGLNTIYRELQELSFKVGSPFRYATLEKAVKAARGNRREVV----KRILE 303
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ A +V ++S GR K+ YS +K+ +V DV G RV+++ +
Sbjct: 304 AAQKALADAGIVAELS--GREKTLYSIYRKMHDKQLSFSQVLDVYGFRVVVETQMH---- 357
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + SL+K MP + KDYIA PK NGY+SLH + V G +E Q
Sbjct: 358 -------CYMAMGALHSLYKPMPGKFKDYIAIPKINGYQSLHTTL-VGPFGTP---VEFQ 406
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM +A G A+H YK
Sbjct: 407 IRTREMHQIAEAGVAAHWMYK 427
>gi|401679361|ref|ZP_10811292.1| GTP diphosphokinase [Veillonella sp. ACP1]
gi|400219582|gb|EJO50446.1| GTP diphosphokinase [Veillonella sp. ACP1]
Length = 746
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 159/319 (49%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA +LA LQ+D + A LL VVE + + + G A L+ ++
Sbjct: 69 LAVAEILAHLQIDHITLIAALLHDVVEDTEYTKEDIEKLFGSEVAFLVDGVTKLNQ---F 125
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +D RK L D+R +++ L RL MR L ++ +Q I+ E ++I
Sbjct: 126 QYETKEDRQMENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKHMRSDKQKRIAKETLEIF 185
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + +ELEDLSFRYL P Y + ++ + +++ EQL + L
Sbjct: 186 APLAHRLGIFNVKWELEDLSFRYLEPDKYYDLVDQMKQKRQAREDIVNDTMEQLTKALGE 245
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
AD ++GR K YS KK+ KD R ++ D+L +RVI+ +
Sbjct: 246 AGIKAD------IKGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDTVPD-------- 291
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I S+WK +P+R KDYI+ PK+N Y+SLH V G +EIQIRT
Sbjct: 292 ---CYAVLGIAHSIWKPLPYRFKDYISMPKSNMYQSLHTTV----IGTMGQPVEIQIRTW 344
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM ++ G A+H YK G
Sbjct: 345 EMHRVSEYGVAAHWRYKEG 363
>gi|303230780|ref|ZP_07317527.1| GTP diphosphokinase [Veillonella atypica ACS-049-V-Sch6]
gi|302514540|gb|EFL56535.1| GTP diphosphokinase [Veillonella atypica ACS-049-V-Sch6]
Length = 746
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 159/319 (49%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA +LA LQ+D + A LL VVE + + + G A L+ ++
Sbjct: 69 LAVAEILAHLQIDHITLIAALLHDVVEDTEYTKEDIEKLFGSEVAFLVDGVTKLNQ---F 125
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +D RK L D+R +++ L RL MR L ++ +Q I+ E ++I
Sbjct: 126 QYETKEDRQMENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKHMRSDKQKRIAKETLEIF 185
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + +ELEDLSFRYL P Y + ++ + +++ EQL + L
Sbjct: 186 APLAHRLGIFNVKWELEDLSFRYLEPDKYYDLVDQMKQKRQAREDIVNDTMEQLTKALGE 245
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
AD ++GR K YS KK+ KD R ++ D+L +RVI+ +
Sbjct: 246 AGIKAD------IKGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDTVPD-------- 291
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I S+WK +P+R KDYI+ PK+N Y+SLH V G +EIQIRT
Sbjct: 292 ---CYAVLGIAHSIWKPLPYRFKDYISMPKSNMYQSLHTTV----IGTMGQPVEIQIRTW 344
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM ++ G A+H YK G
Sbjct: 345 EMHRVSEYGVAAHWRYKEG 363
>gi|390559275|ref|ZP_10243626.1| GTP pyrophosphokinase [Nitrolancetus hollandicus Lb]
gi|390174152|emb|CCF82919.1| GTP pyrophosphokinase [Nitrolancetus hollandicus Lb]
Length = 721
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/327 (33%), Positives = 169/327 (51%), Gaps = 26/327 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESL---R 166
++ + VA++LA++Q+D E ++A LL VVE +++ +R G L+ R
Sbjct: 40 ISHPVEVAIILAEMQLDQETLAAALLHDVVEDTDTTMEDLRTLFGDRIVRLVDGVTKLGR 99
Query: 167 VKNNVNLKLQVLDDE-TAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMI 224
++ V + E A +LRK L D +R +++ LA RL MR L+++PR +QL
Sbjct: 100 IRWAAETDHAVREKERQAESLRKMFLAMVDDVRVVLIKLADRLHNMRTLEHMPRAKQLRS 159
Query: 225 SLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKE 284
+ E M+I+APLA+ + + ELEDL+ RY+ P +Y ++ L T D Y E
Sbjct: 160 AKETMEIYAPLANRLGIWQIKSELEDLALRYVDPQTYFTIERALERRGTDR----DQYLE 215
Query: 285 QLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSN 344
++ L TL D + GR K S +K+ + R +E+ DVLG+RVI+ +
Sbjct: 216 SVIAELSR--TLEDAGIGAEISGREKHITSIARKMERKERSFDEIYDVLGIRVIVDEKKD 273
Query: 345 LVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPL 404
CY +I S+W +P DY+A PK + Y+S+H V + NG PL
Sbjct: 274 -----------CYGALGVIHSIWHPIPGEFDDYVATPKESMYQSIHTVV-LGPNG--HPL 319
Query: 405 MEIQIRTEEMDMLAVNGTASHAFYKGG 431
EIQIRT EM +A G A+H YK G
Sbjct: 320 -EIQIRTHEMHYIAEYGIAAHWRYKEG 345
>gi|414160989|ref|ZP_11417252.1| GTP pyrophosphokinase [Staphylococcus simulans ACS-120-V-Sch1]
gi|410876668|gb|EKS24566.1| GTP pyrophosphokinase [Staphylococcus simulans ACS-120-V-Sch1]
Length = 729
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 166/330 (50%), Gaps = 47/330 (14%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++ +D I AG L V+E + V+ A ++ ++K +
Sbjct: 55 IQVAGILTEMHLDGPTIVAGFLHDVIEDTPYTFDDVKAMFNDEVAMIVEGVTKLKK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 112 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISKETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED++ RY+ Y + ++ + +
Sbjct: 172 APLAHRLGINTIKWELEDIALRYIDGVQYFRIVNLMKKKRS-----------------ER 214
Query: 293 DATLADLVEDV-----------SVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKP 341
+A +A+ ++++ + GR K YS +K++K + +++ D+L +R+I+
Sbjct: 215 EAYIANAIDNIRAEMDKMHISGEINGRPKHIYSIYRKMMKQKKQFDQIFDLLAVRIIVDS 274
Query: 342 SSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKT 401
+ CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG
Sbjct: 275 IKD-----------CYAVLGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTV-VGPNGD- 321
Query: 402 RPLMEIQIRTEEMDMLAVNGTASHAFYKGG 431
PL EIQIRT EM +A +G A+H YK G
Sbjct: 322 -PL-EIQIRTHEMHEIAEHGVAAHWAYKEG 349
>gi|357236902|ref|ZP_09124245.1| putative bifunctional (P)ppGpp synthase/hydrolase RelA
[Streptococcus criceti HS-6]
gi|356884884|gb|EHI75084.1| putative bifunctional (P)ppGpp synthase/hydrolase RelA
[Streptococcus criceti HS-6]
Length = 740
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 170/327 (51%), Gaps = 26/327 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADLQ+DA ++ G L VVE V+++ + G+ + ++ ++ +
Sbjct: 55 IQVAGILADLQLDAVTVACGFLHDVVEDTEVTLEDLERDFGLKVSQIVDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK + DIR +++ LA RL MR L +L +Q IS E M+I+
Sbjct: 112 KYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRPDKQKRISRETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELEDL+FRYL + + + + L+D ++++ +K
Sbjct: 172 APLAHRLGISAIKWELEDLAFRYLNEVEFYKISHMMHEKRRERESLVD----EIVEKIKN 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
L + GR K YS +K+ + +++ D++ +R I+ S++
Sbjct: 228 YTAEQGL--HGKIYGRPKHIYSIYRKMRDKKKRFDQIYDLIAIRCIMDTPSDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PK+NGY+S+H V G P+ EIQIRT+
Sbjct: 279 ----YAMLGYIHELWRPMPGRFKDYIANPKSNGYQSIHTTV----YGPKGPI-EIQIRTQ 329
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAK 439
EM +A G A+H YK G+ +A+
Sbjct: 330 EMHEVAEYGVAAHWAYKKGIKGKVDAQ 356
>gi|17546872|ref|NP_520274.1| bifunctional (P)ppGpp synthetase II/guanosine-3',5'-bisdiphosphate
3'-pyrophosphohydrolase [Ralstonia solanacearum GMI1000]
gi|17429172|emb|CAD15860.1| probable bifunctional enzyme : (p)ppgpp synthetase II and
guanosine-3',5'-bisdiphosphate 3'-pyrophosphohydrolase
(ppgppase) protein [Ralstonia solanacearum GMI1000]
Length = 735
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 190/395 (48%), Gaps = 32/395 (8%)
Query: 48 SPAPLPSTAGEKMVVKLVGAFNELTERMNVLSSSSSRLLFKALKLSIPMLQSLPLSPDSR 107
P P+ + VV + G LTE+++ L + +L+ +A S L S
Sbjct: 3 GPTSQPAAPPRQQVVSIAG----LTEKLSYLKPADIKLVKEAFHFSDEA--HLGQYRQSG 56
Query: 108 SP-LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLR 166
P +T ++VA + A ++D + I A LL V+E GV+ ++ ++ G A L+ +
Sbjct: 57 EPYITHPVAVAEICAGWKLDVQSIMAALLHDVIEDQGVTKSELAEKFGPKVAELVDGLTK 116
Query: 167 VKNNVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMIS 225
+ L+ Q + A + RK L D+R +++ LA R MR LD++P ++ I+
Sbjct: 117 LDK---LEFQSREQAQAESFRKMLLAMARDVRVILVKLADRTHNMRTLDHVPPEKRRRIA 173
Query: 226 LEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQ 285
E M+I+AP+AH + N EL++LSFR PF Y ++ +++ + ++ E
Sbjct: 174 GETMEIYAPIAHRLGLNTTYRELQELSFRIGSPFRYATLEKAVKAARGNRREVVSRILEA 233
Query: 286 LLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNL 345
+ L A+L GR K+ YS +K+ +V DV G RV+++ +
Sbjct: 234 AQRALGDAGVSAELT------GREKTLYSIYRKMHDKQLSFSQVLDVYGFRVVVETQMH- 286
Query: 346 VNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLM 405
CY + L+K MP + KDYIA PK NGY+S+H + G +
Sbjct: 287 ----------CYMAVGALHGLYKPMPGKFKDYIAIPKINGYQSVHTTL----VGPFGTPV 332
Query: 406 EIQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKR 440
E QIRT EM+ +A G A+H YK P+ A++
Sbjct: 333 EFQIRTREMNQIAEAGVAAHWMYKQHHDEPDRAQQ 367
>gi|300088447|ref|YP_003758969.1| (p)ppGpp synthetase I [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299528180|gb|ADJ26648.1| (p)ppGpp synthetase I, SpoT/RelA [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 733
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/327 (35%), Positives = 168/327 (51%), Gaps = 32/327 (9%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHE-------SLR 166
L+VA+ LADLQ+D I+A LL V E + + + ++ G A L+ SL
Sbjct: 49 LAVAMELADLQLDTTAIAAALLHDVPEDSDIPLAGIEEKFGPDVARLVDGVTKLAKLSLA 108
Query: 167 VKNNVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMIS 225
+ A LRK + D+R + + L+ RL MR LD +P +Q I+
Sbjct: 109 APGETRFSGNTTYERQAENLRKMLVAMAEDLRVVFIKLSDRLHNMRTLDAMPSEKQKDIA 168
Query: 226 LEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQ 285
E M+I+APLAH + + ++LEDLSFR+L P Y + + G + + + +
Sbjct: 169 RETMEIYAPLAHRLGIWEIKWQLEDLSFRFLEPVRYKQLARLI----AGKRAQREEFITK 224
Query: 286 LLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLK---DGRIPEEVNDVLGLRVIIKPS 342
++ LK++ A L +V+ GR K +S +K K GR +E+ D+L +RV++
Sbjct: 225 VINILKSEFENAGLKPEVN--GRAKHIFSLHQKAEKYSAQGRHFDEIYDLLAIRVLV--- 279
Query: 343 SNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTR 402
N VN CYT + +LW +P DYIA PK NGY+SLH AV +S NG
Sbjct: 280 -NTVNE-------CYTALGAVHNLWHPIPGSFDDYIANPKPNGYQSLHTAV-LSLNGT-- 328
Query: 403 PLMEIQIRTEEMDMLAVNGTASHAFYK 429
PL EIQIRT +M LA G A+H YK
Sbjct: 329 PL-EIQIRTYDMHRLAEYGVAAHWRYK 354
>gi|222055238|ref|YP_002537600.1| (p)ppGpp synthetase I SpoT/RelA [Geobacter daltonii FRC-32]
gi|221564527|gb|ACM20499.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter daltonii FRC-32]
Length = 716
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/334 (34%), Positives = 169/334 (50%), Gaps = 26/334 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L + VA +LA+L++D + GLL VE +++++ + G A L+ ++
Sbjct: 46 LVHPMEVAGVLAELKLDVPTVVTGLLHDTVEDTLTTLEELEEMFGPEVARLVDGVTKIGK 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + ++ A RK L DIR +++ LA RL MR L Y P +Q I+ E
Sbjct: 106 ---IHFKTKEESQAENFRKMLLAMANDIRVILVKLADRLHNMRTLQYQPEPKQRSIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+AP+A+ + +++ ELEDLSFRYL P ++ D L S T K + Y ++++Q
Sbjct: 163 LDIYAPIANRLGISWVKSELEDLSFRYLDP--QIYYD--LASKVTKKKKERETYVDEVMQ 218
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+K A L D V GR K YS +K+ +E+ D++ +RV+++
Sbjct: 219 IIK--AKLVDHGIKGEVSGRSKHLYSIYRKMQSRSVDIDEIYDLIAIRVMVEDI------ 270
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY II S WK +P R KDYIA PK N Y+SLH V G ME+Q
Sbjct: 271 -----RECYEVLGIIHSTWKPIPGRFKDYIAMPKGNMYQSLHTTV----IGPYGERMEVQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPE-EAKRL 441
IRT EM +A G A+H YK G E E KR
Sbjct: 322 IRTSEMHRVAEAGIAAHWKYKEGKGYDEKEVKRF 355
>gi|297626354|ref|YP_003688117.1| GTP pyrophosphokinase [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296922119|emb|CBL56687.1| GTP pyrophosphokinase [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 783
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/336 (35%), Positives = 170/336 (50%), Gaps = 37/336 (11%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LA+L M + A LL VE +++Q+R G A L+ ++
Sbjct: 102 ITHPLAVATILAELGMTEPTLCAALLHDTVEDTSYTLEQLRADFGDTIAALVDGVTKLD- 160
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
K+Q D A +RK + DIR L++ LA RL MR L +L +Q I+ E
Sbjct: 161 ----KVQYGDSAKAETIRKMVIAMSRDIRVLVIKLADRLHNMRTLGFLRPDKQHRIARET 216
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLR-SHETGSKPLIDIYKEQLL 287
++I+APLAH + N + +ELEDL F L P Y D +R E K ++QL
Sbjct: 217 LEIYAPLAHRLGMNAIKWELEDLCFSTLQPKVY---DEIVRLVAEAAPK-----REQQLR 268
Query: 288 QCL-KTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLV 346
+ + + L D +V GR K YS +K++ GR E++ D++GLR+ LV
Sbjct: 269 EVIDQVKVYLDDAKLTATVYGRPKHYYSIYQKMVVRGRDFEDIYDLVGLRI-------LV 321
Query: 347 NTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLME 406
+T+ R CY +I + W +P R KDYIA PK N Y+SLH V +RP+ E
Sbjct: 322 DTT----RDCYAALGVIHTHWNPLPGRFKDYIAMPKYNMYQSLHTTV---LGPGSRPV-E 373
Query: 407 IQIRTEEMDMLAVNGTASHAFYK------GGLTNPE 436
QIRT EM A G A+H YK GG +PE
Sbjct: 374 FQIRTHEMHRRAEFGVAAHWKYKEDPNAQGGKIDPE 409
>gi|209560112|ref|YP_002286584.1| GTP pyrophosphokinase / Guanosine- 3,5-bis(Diphosphate)
3-pyrophosphohydrolase [Streptococcus pyogenes NZ131]
gi|209541313|gb|ACI61889.1| GTP pyrophosphokinase / Guanosine- 3,5-bis(Diphosphate)
3-pyrophosphohydrolase [Streptococcus pyogenes NZ131]
Length = 739
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 169/324 (52%), Gaps = 26/324 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +LADL +DA ++ G L VVE +++ ++ G ++ ++
Sbjct: 51 IVHPIQVAGILADLHLDAVTVACGFLHDVVEDTDITLDEIEADFGQDARDIVDGDTKLGK 110
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E
Sbjct: 111 ---VEYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRET 167
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLAH + + + +ELEDL+FRYL + + ++ + L+ E ++
Sbjct: 168 MEIYAPLAHRLGISRIKWELEDLAFRYLNETEFYKISHMMKEKRREREALV----EAIVS 223
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+KT T L D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 224 KVKTYTTQQGLFGD--VYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCVMETQSDV--- 278
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQ
Sbjct: 279 --------YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQ 325
Query: 409 IRTEEMDMLAVNGTASHAFYKGGL 432
IRT++M +A G A+H YK G+
Sbjct: 326 IRTKDMHQVAEYGVAAHWAYKKGV 349
>gi|225871285|ref|YP_002747232.1| GTP pyrophosphokinase [Streptococcus equi subsp. equi 4047]
gi|225700689|emb|CAW95287.1| GTP pyrophosphokinase [Streptococcus equi subsp. equi 4047]
Length = 739
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 182/368 (49%), Gaps = 28/368 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +LADL +DA + G L VVE ++++ + G ++ ++
Sbjct: 51 IVHPIQVAAILADLHLDAVTVVCGFLHDVVEDTDITLEDIEFDFGKDVRDIVDGVTKLGK 110
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E
Sbjct: 111 ---VEYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRET 167
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLAH + + + +ELEDL+FRYL + + +R + L+D ++
Sbjct: 168 MEIYAPLAHRLGISRIKWELEDLAFRYLNEIEFYKISHMMREKRREREALVD----DIVT 223
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+K T L DV GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 224 KIKAYTTDQGLYGDVY--GRPKHIYSVYRKMRDKKKRFDQIFDLIAIRCVMETQSDV--- 278
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
Y I LW+ MP R KDYIA PK NGY+S+H V G P+ EIQ
Sbjct: 279 --------YAMVGYIHELWRPMPGRFKDYIAAPKTNGYQSIHTTV----YGPKGPI-EIQ 325
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFE 468
IRT+EM +A G A+H YK G+ K M EL + L+ + + KGF
Sbjct: 326 IRTKEMHQVAEYGVAAHWAYKKGIRGKVNQVEQKVGMNWIKEL--VELQAASNGDAKGFV 383
Query: 469 FDWRDRVF 476
++ +F
Sbjct: 384 DSVKEDIF 391
>gi|436839902|ref|YP_007324280.1| GTP pyrophosphokinase [Desulfovibrio hydrothermalis AM13 = DSM
14728]
gi|432168808|emb|CCO22174.1| GTP pyrophosphokinase [Desulfovibrio hydrothermalis AM13 = DSM
14728]
Length = 737
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/330 (33%), Positives = 170/330 (51%), Gaps = 43/330 (13%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L L VA LLAD+++D ++AGLL VE +I ++ + G A ++ +
Sbjct: 62 LAHPLHVAKLLADMRLDEPTVAAGLLHDTVEDTDTTIDEIVELFGEEVADIV-------D 114
Query: 170 NVNLKLQVLDDETAAA-----LRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLM 223
V K+ ++D E+ A +RK L DIR L++ LA RL MR LD+ Y+Q +
Sbjct: 115 GVT-KISMMDFESKAIAKAENIRKMILAMAEDIRVLMVKLADRLHNMRTLDFQKSYKQQL 173
Query: 224 ISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYK 283
I+ E + I++PLA+ + + +LEDL YL P Y + L T K +D
Sbjct: 174 IAQETLDIYSPLANRLGLYMVKRDLEDLCLYYLKPDVYNAITDGLERQHTLGKEYVD--- 230
Query: 284 EQLLQCLKTDATLADLVEDVSVQ----GRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVII 339
K A L D++++ ++ GR K ++S KK+ + G +EV+D++ RVI+
Sbjct: 231 -------KVLALLNDILKNNEIEGTIYGRTKHKFSIHKKMQRQGLNLDEVHDIIAFRVIV 283
Query: 340 KPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNG 399
+ CY+ ++ S+WK + R KDYI+ PKAN Y+SLH V + G
Sbjct: 284 DSVKD-----------CYSVLGLVHSMWKPISGRFKDYISIPKANMYQSLHTTV-IGPEG 331
Query: 400 KTRPLMEIQIRTEEMDMLAVNGTASHAFYK 429
+ +EIQIRTEEM +A G A+H YK
Sbjct: 332 ER---IEIQIRTEEMQQVAEYGIAAHWQYK 358
>gi|242040981|ref|XP_002467885.1| hypothetical protein SORBIDRAFT_01g035870 [Sorghum bicolor]
gi|241921739|gb|EER94883.1| hypothetical protein SORBIDRAFT_01g035870 [Sorghum bicolor]
Length = 889
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/334 (32%), Positives = 176/334 (52%), Gaps = 18/334 (5%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVE-SGGVSIQQVRDRIGIGTAHLLHESLRVKNNVN 172
+ VA +L + ++D E I+AGLL VE + V+ +++ + G ++ +V
Sbjct: 186 VEVARILGEHELDWESIAAGLLHDTVEDTDVVTFERIENEFGPTVRRIVEGETKVSKLGK 245
Query: 173 LKLQV----LDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLE 227
L+ + D A LR+ F ++R +I+ LA RL MR L ++P+++Q I++E
Sbjct: 246 LQCKSEGSSKQDLKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLTHMPQHKQYAIAME 305
Query: 228 VMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYL----FVDTWLRSHETGSKPLIDIYK 283
+++ APLA + + ELE LSF Y+ P + V+ ++HE + I +
Sbjct: 306 TLQVFAPLAKLLGMYRIKSELEYLSFMYVNPTGFAELRKRVEDLYKAHEQELEEANRILR 365
Query: 284 EQLLQCLKTDATLADLVE-DVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKP- 341
+++++ D L DLV + V+ YK YS K LK EVN V LR+IIKP
Sbjct: 366 QKIVE----DQFL-DLVSVETEVRSVYKELYSIYKSTLKSKSSINEVNQVAQLRIIIKPK 420
Query: 342 SSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKT 401
S N V ++ CY ++ +W +P KDYIA PK NGY+SLH V N ++
Sbjct: 421 SCNGVGPLCTAQQICYHVLGLVHGIWTPIPQAVKDYIATPKPNGYQSLHTTVIPFLN-ES 479
Query: 402 RPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNP 435
+E+QIRTE+MD++A G A+H +G ++ P
Sbjct: 480 MFHLEVQIRTEDMDLIAERGIAAHYSGRGVVSGP 513
>gi|189425343|ref|YP_001952520.1| (p)ppGpp synthetase I SpoT/RelA [Geobacter lovleyi SZ]
gi|189421602|gb|ACD96000.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter lovleyi SZ]
Length = 716
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/330 (33%), Positives = 163/330 (49%), Gaps = 26/330 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L VA LLA L++D I G L +E + +++ + G A L+ ++ +
Sbjct: 50 LEVAGLLAGLKLDVPSIVTGFLHDTIEDTLTTSEELAEMFGKEVAELVDGVTKISK---I 106
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ ++ A RK + DIR +++ LA RL MR L + P +Q IS E M I+
Sbjct: 107 HFKTKEENQAENFRKMLIAMANDIRVILVKLADRLHNMRTLQFQPDTKQRSISRETMDIY 166
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+AH + +++ ELEDLSFRYL P Y + T ++ + + I +E + Q L
Sbjct: 167 APIAHRLGISWIKTELEDLSFRYLQPDVYFDLATKIQRKKQERESFIHEIQEAIRQKLVE 226
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ + V GR K YS +K+ K EE+ D+ LR+++
Sbjct: 227 HQIVGE------VSGRSKHLYSIYRKMEKRKVDFEEIYDLTALRILVDDI---------- 270
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
++CY +I S W+ +P R KDYIA PK N Y+SLH V + +G ME+QIRT
Sbjct: 271 -KSCYEVLGLIHSSWRPIPGRFKDYIAMPKGNMYQSLHTTV-IGPHGDR---MEVQIRTH 325
Query: 413 EMDMLAVNGTASHAFYKGGLTNPE-EAKRL 441
EM +A G A+H YK G E E KR
Sbjct: 326 EMHRVAEAGIAAHWKYKEGKGYDEKEVKRF 355
>gi|313150268|dbj|BAJ39892.1| ppGpp synthetase [Actinoplanes teichomyceticus]
Length = 821
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 169/321 (52%), Gaps = 27/321 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LA+L MD + A LL +E ++Q+R+ G A L+ ++
Sbjct: 140 ITHPLAVATILANLGMDTTTLVAALLHDTIEDTDYGLEQMRNDFGAEVALLVDGVTKLD- 198
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++++ D A +RK + D R L++ LA RL MR L +LPR +Q + E
Sbjct: 199 ----RVKLGDAAKAETIRKMVVAMAKDPRVLVIKLADRLHNMRTLTFLPRPKQEQKAKET 254
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I APLAH + N + +ELEDL+F LFP + ++ + H+ + L+ Q+
Sbjct: 255 LEILAPLAHRLGMNTIKWELEDLAFGTLFPKRFEEINRLIGEHQPQREALL----RQVTN 310
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
++ D A + +V+ GR K YS +K++ GR ++ D++G+R+ LV+T
Sbjct: 311 RVQLDLKSAKIKAEVT--GRPKHLYSIYQKMIVRGRDFNDIYDLVGVRI-------LVDT 361
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY +I + W+ +P R KDYIA PK N Y+SLH V + GK +E+Q
Sbjct: 362 V----RDCYAALGVIHANWQPVPGRFKDYIAMPKFNMYQSLHTTV-IGPTGKP---VEMQ 413
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT M A G A+H YK
Sbjct: 414 IRTFAMHRTAEFGIAAHWKYK 434
>gi|94995176|ref|YP_603274.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Streptococcus pyogenes
MGAS10750]
gi|94548684|gb|ABF38730.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Streptococcus pyogenes
MGAS10750]
Length = 743
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 169/324 (52%), Gaps = 26/324 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +LADL +DA ++ G L VVE +++ ++ G ++ ++
Sbjct: 55 IVHPIQVAGILADLHLDAVTVACGFLHDVVEDTDITLDEIEADFGQDARDIVDGVTKLGK 114
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E
Sbjct: 115 ---VEYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRET 171
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLAH + + + +ELEDL+FRYL + + ++ + L+ E ++
Sbjct: 172 MEIYAPLAHRLGISRIKWELEDLAFRYLNETEFYKISHMMKEKRREREALV----EAIVS 227
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+KT T L D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 228 KVKTYTTQQGLFGD--VYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCVMETQSDV--- 282
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQ
Sbjct: 283 --------YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQ 329
Query: 409 IRTEEMDMLAVNGTASHAFYKGGL 432
IRT++M +A G A+H YK G+
Sbjct: 330 IRTKDMHQVAEYGVAAHWAYKKGV 353
>gi|443290378|ref|ZP_21029472.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Micromonospora
lupini str. Lupac 08]
gi|385886705|emb|CCH17546.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Micromonospora
lupini str. Lupac 08]
Length = 842
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/321 (34%), Positives = 165/321 (51%), Gaps = 27/321 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +L +L MD + A LL +E ++ +R G G LL + + +
Sbjct: 161 ITHPLAVATILGNLGMDTTTLVAALLHDTIEDTEYTLDAMRADFG-GEVALLVDGVTKLD 219
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
V L D A +RK + D R L++ LA RL MR L +LPR +Q + E
Sbjct: 220 KVKLG----DAAKAETIRKMVVAMAKDPRVLVIKLADRLHNMRTLTFLPRPKQEQKAKET 275
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I APLAH + N + +ELEDL+F LFP Y ++ + H+ + L+ Q+ Q
Sbjct: 276 LEILAPLAHRLGMNTIKWELEDLAFGTLFPKRYEEINRLIGEHQPQRESLL----RQVTQ 331
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ TD A + + + GR K YS +K++ GR ++ D++G+R+ LV+T
Sbjct: 332 KVGTDLKAAKIKAETT--GRPKHLYSIYQKMIVRGRDFNDIYDLVGVRI-------LVDT 382
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY +I + W+ +P R KDYIA PK N Y+SLH V + GK +E+Q
Sbjct: 383 V----RDCYAALGVIHANWQPVPGRFKDYIAMPKFNMYQSLHTTV-IGPTGKP---VEMQ 434
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT M A G A+H YK
Sbjct: 435 IRTYAMHRTAEFGIAAHWKYK 455
>gi|357237402|ref|ZP_09124743.1| RelA/SpoT family protein [Streptococcus ictaluri 707-05]
gi|356753592|gb|EHI70695.1| RelA/SpoT family protein [Streptococcus ictaluri 707-05]
Length = 739
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 174/347 (50%), Gaps = 26/347 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +LADL +DA ++ G L VVE ++++ + G ++ ++
Sbjct: 51 IVHPIQVAAILADLHLDAVTVACGFLHDVVEDTDITLENIEADFGKDVRDIVDGVTKLGK 110
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E
Sbjct: 111 ---VEYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRET 167
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLAH + + + +ELEDL+FRYL + + + + L+ E ++
Sbjct: 168 MEIYAPLAHRLGISRIKWELEDLAFRYLNEAEFYKISHMMSEKRREREALV----EDIVT 223
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+KT T L D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 224 KIKTYTTEQGLFGD--VYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCVMETQSDV--- 278
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQ
Sbjct: 279 --------YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQ 325
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALR 455
IRT++M +A G A+H YK G+ K M EL L+
Sbjct: 326 IRTKDMHQVAEYGVAAHWAYKKGVRGKVNQAEQKMSMNWIKELVELQ 372
>gi|398993177|ref|ZP_10696131.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM21]
gi|398135364|gb|EJM24484.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM21]
Length = 701
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 162/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + ++ + G A L+ V
Sbjct: 46 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALQAQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ + P ++ ++ K +++ +E L
Sbjct: 163 LEIYAPIANRLGMHAIRIEFEDLGFKAMHPMRSARINQAVKRARGNRKEIVNKIEESLSH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D + V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAIDGIQGE------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|402829133|ref|ZP_10878014.1| putative GTP diphosphokinase [Slackia sp. CM382]
gi|402284887|gb|EJU33380.1| putative GTP diphosphokinase [Slackia sp. CM382]
Length = 780
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 168/317 (52%), Gaps = 25/317 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA++L DL+MD + +SA LL VE V+ +++ + A L+ ++ +
Sbjct: 89 IEVAIILTDLKMDVDTLSAALLHDTVEDTEVTDEELAETFNPEVAQLVEGVTKI---TKI 145
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+++ L DE AA +RK F DIR +++ LA RL MR L L +++ + E M+I+
Sbjct: 146 EVESLTDEQAATIRKMFVAMSKDIRVIVIKLADRLHNMRTLSALKEDRRIFKAHETMEIY 205
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+AH + + +ELEDL+F YL P + + + S+ + Y ++ L
Sbjct: 206 APIAHRLGIGSIKWELEDLAFYYLEPTRFRRIARMVDE----SRADREDYLAGVIDTLTG 261
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
D L +L + + GR K +S K+ + G+ E+ D++ +R+I+K +
Sbjct: 262 D--LDELGIESRIMGRPKHLWSINMKMTQRGKGFSEIYDLIAVRIIVKTLKD-------- 311
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY+ + S W MP R KDYIA PK N Y+SLH V + +G RPL E+QIRTE
Sbjct: 312 ---CYSALGAVHSRWHPMPGRFKDYIAMPKINMYQSLHTTV-IGPSG--RPL-EVQIRTE 364
Query: 413 EMDMLAVNGTASHAFYK 429
+M ++ G A+H YK
Sbjct: 365 DMHRMSEYGIAAHWRYK 381
>gi|71904336|ref|YP_281139.1| GTP pyrophosphokinase [Streptococcus pyogenes MGAS6180]
gi|71803431|gb|AAX72784.1| GTP pyrophosphokinase [Streptococcus pyogenes MGAS6180]
Length = 743
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 169/324 (52%), Gaps = 26/324 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +LADL +DA ++ G L VVE +++ ++ G ++ ++
Sbjct: 55 IVHPIQVAGILADLHLDAVTVACGFLHDVVEDTDITLDEIEADFGQDARDIVDGVTKLGK 114
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E
Sbjct: 115 ---VEYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRET 171
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLAH + + + +ELEDL+FRYL + + ++ + L+ E ++
Sbjct: 172 MEIYAPLAHRLGISRIKWELEDLAFRYLNETEFYKISHMMKEKRREREALV----EAIVS 227
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+KT T L D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 228 KVKTYTTQQGLFGD--VYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCVMETQSDV--- 282
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQ
Sbjct: 283 --------YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQ 329
Query: 409 IRTEEMDMLAVNGTASHAFYKGGL 432
IRT++M +A G A+H YK G+
Sbjct: 330 IRTKDMHQVAEYGVAAHWAYKKGV 353
>gi|28896614|ref|NP_802964.1| (p)ppGpp synthetase [Streptococcus pyogenes SSI-1]
gi|28811868|dbj|BAC64797.1| putative (p)ppGpp synthetase [Streptococcus pyogenes SSI-1]
Length = 743
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 169/324 (52%), Gaps = 26/324 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +LADL +DA ++ G L VVE +++ ++ G ++ ++
Sbjct: 55 IVHPIQVAGILADLHLDAVTVACGFLHDVVEDTDITLDEIEADFGQDARDIVDGVTKLGK 114
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E
Sbjct: 115 ---VEYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRET 171
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLAH + + + +ELEDL+FRYL + + ++ + L+ E ++
Sbjct: 172 MEIYAPLAHRLGISRIKWELEDLAFRYLNETEFYKISHMMKEKRREREALV----EAIVS 227
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+KT T L D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 228 KVKTYTTQQGLFGD--VYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCVMETQSDV--- 282
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQ
Sbjct: 283 --------YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQ 329
Query: 409 IRTEEMDMLAVNGTASHAFYKGGL 432
IRT++M +A G A+H YK G+
Sbjct: 330 IRTKDMHQVAEYGVAAHWAYKKGV 353
>gi|325568309|ref|ZP_08144676.1| GTP diphosphokinase [Enterococcus casseliflavus ATCC 12755]
gi|420264623|ref|ZP_14767252.1| GTP diphosphokinase [Enterococcus sp. C1]
gi|325158078|gb|EGC70231.1| GTP diphosphokinase [Enterococcus casseliflavus ATCC 12755]
gi|394767937|gb|EJF48167.1| GTP diphosphokinase [Enterococcus sp. C1]
Length = 736
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 167/329 (50%), Gaps = 25/329 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+LQMD ++ G L VVE V++ +++ G A L+ ++ +
Sbjct: 55 IQVAGILAELQMDPHTVATGFLHDVVEDTDVTLADLKEEFGADVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK + D+R +++ LA RL MR L +L +Q I+ E M+I+
Sbjct: 112 KYKSHEEQLAENHRKMLIAMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED+S RYL P Y + +++ + Y + ++ ++
Sbjct: 172 APLAHRLGISRIKWELEDISLRYLNPQQYYRIVHLMQTKREERES----YVSETVEEIRI 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
D+ ++ GR K YS +K+ + E+ D+L +RVI+ +
Sbjct: 228 ATEELDIYAEIY--GRPKHIYSIYRKMKDQKKQFNEIYDLLAIRVIVDSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKAN Y+SLH V + G +EIQIRT
Sbjct: 278 ---CYAVLGTIHTKWKPMPGRFKDYIAMPKANMYQSLHTTV-IGPKGNP---VEIQIRTH 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRL 441
EM +A G A+H YK G T A ++
Sbjct: 331 EMHEIAEFGVAAHWAYKEGKTEKVRADKM 359
>gi|306826586|ref|ZP_07459893.1| GTP diphosphokinase [Streptococcus pyogenes ATCC 10782]
gi|304431224|gb|EFM34226.1| GTP diphosphokinase [Streptococcus pyogenes ATCC 10782]
Length = 743
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 169/324 (52%), Gaps = 26/324 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +LADL +DA ++ G L VVE +++ ++ G ++ ++
Sbjct: 55 IVHPIQVAGILADLHLDAVTVACGFLHDVVEDTDITLDEIEADFGQDARDIVDGVTKLGK 114
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E
Sbjct: 115 ---VEYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRET 171
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLAH + + + +ELEDL+FRYL + + ++ + L+ E ++
Sbjct: 172 MEIYAPLAHRLGISRIKWELEDLAFRYLNETEFYKISHMMKEKRREREALV----EAIVS 227
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+KT T L D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 228 KVKTYTTQQGLFGD--VYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCVMETQSDV--- 282
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQ
Sbjct: 283 --------YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQ 329
Query: 409 IRTEEMDMLAVNGTASHAFYKGGL 432
IRT++M +A G A+H YK G+
Sbjct: 330 IRTKDMHQVAEYGVAAHWAYKKGV 353
>gi|269217259|ref|ZP_06161113.1| GTP diphosphokinase [Slackia exigua ATCC 700122]
gi|269129396|gb|EEZ60481.1| GTP diphosphokinase [Slackia exigua ATCC 700122]
Length = 780
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 168/317 (52%), Gaps = 25/317 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA++L DL+MD + +SA LL VE V+ +++ + A L+ ++ +
Sbjct: 89 IEVAIILTDLKMDVDTLSAALLHDTVEDTEVTDEELAETFNPEVAQLVEGVTKI---TKI 145
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+++ L DE AA +RK F DIR +++ LA RL MR L L +++ + E M+I+
Sbjct: 146 EVESLTDEQAATIRKMFVAMSKDIRVIVIKLADRLHNMRTLSALKEDRRIFKAHETMEIY 205
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+AH + + +ELEDL+F YL P + + + S+ + Y ++ L
Sbjct: 206 APIAHRLGIGSIKWELEDLAFYYLEPTRFRRIARMVDE----SRADREDYLAGVIDTLTG 261
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
D L +L + + GR K +S K+ + G+ E+ D++ +R+I+K +
Sbjct: 262 D--LDELGIESRIMGRPKHLWSINMKMTQRGKGFSEIYDLIAVRIIVKTLKD-------- 311
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY+ + S W MP R KDYIA PK N Y+SLH V + +G RPL E+QIRTE
Sbjct: 312 ---CYSALGAVHSRWHPMPGRFKDYIAMPKINMYQSLHTTV-IGPSG--RPL-EVQIRTE 364
Query: 413 EMDMLAVNGTASHAFYK 429
+M ++ G A+H YK
Sbjct: 365 DMHRMSEYGIAAHWRYK 381
>gi|317153777|ref|YP_004121825.1| RelA/SpoT family protein [Desulfovibrio aespoeensis Aspo-2]
gi|316944028|gb|ADU63079.1| RelA/SpoT family protein [Desulfovibrio aespoeensis Aspo-2]
Length = 726
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 164/321 (51%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ ++VA LLA++Q+D ++AGLL VE S+ ++ + G A ++ ++
Sbjct: 46 ISHPMNVAYLLAEMQLDEATVAAGLLHDTVEDTQASVDEIEEFFGSDVADIVDGVTKISQ 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +RK L DIR L++ LA RL MR L+++ +Q +I+ E
Sbjct: 106 ---MDFESKAVQQAENIRKLILAMAEDIRVLMVKLADRLHNMRTLEFMKPVKQRLIAQET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
I+APLA+ + + + ELEDL RYL P + + + H +P ID + +
Sbjct: 163 QDIYAPLANRLGLHRVKTELEDLCLRYLKPDVFDQLSQAVSEHRASGEPYIDKVIDLIND 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
LK + V GR K +S K+ + G +E+ D++ R+I++ +
Sbjct: 223 MLKKNKIKG------RVYGRTKHLHSIHVKMEQQGLTFDEIYDLIAFRIILESVKD---- 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY +I S+W+ +P R KDYI+ PKAN Y+SLH V D + +E+Q
Sbjct: 273 -------CYAVLGLIHSIWRPVPGRFKDYISIPKANMYQSLHSTVIGPDGER----IEVQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRTEEM+ +A G A+H YK
Sbjct: 322 IRTEEMNRIAEYGVAAHWQYK 342
>gi|269926113|ref|YP_003322736.1| (p)ppGpp synthetase I SpoT/RelA [Thermobaculum terrenum ATCC
BAA-798]
gi|269789773|gb|ACZ41914.1| (p)ppGpp synthetase I, SpoT/RelA [Thermobaculum terrenum ATCC
BAA-798]
Length = 721
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 130/385 (33%), Positives = 195/385 (50%), Gaps = 37/385 (9%)
Query: 65 VGAFNELTERMNVLSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQ 124
+G + L + N LSS L+ +A +++ + ++ ++VAL+LADL+
Sbjct: 1 MGYWETLDKGTNYLSSLDKDLIRRAYEVADKAHEG-EYRKSGEPFISHPVNVALILADLK 59
Query: 125 MDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDET-- 182
DA+ I++ LL VE +++ + G + L+ + L N + L DDE
Sbjct: 60 QDAQAIASALLHDTVEDTNLTLDDIETIFGPEVSRLV-DGLTKLNKIRLSP---DDEKDP 115
Query: 183 ------AAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPL 235
A LRK F D R +++ LA RL MR +++LPR +QL + E ++I+APL
Sbjct: 116 KEQQAQAENLRKMFLAMVEDPRVVLIKLADRLHNMRTIEHLPRDKQLSKARETLEIYAPL 175
Query: 236 AHAVATNYLSFELEDLSFRYLFPFSYLFVDTWL-RSHETGSKPLIDIYKEQLLQCLKTDA 294
A + ELEDLSF+ L+P Y + + RS T K Y EQ + LK
Sbjct: 176 AGRLGIFKFRSELEDLSFKVLYPDKYREIAAQVERSGVTRGK-----YIEQAIDVLKKAL 230
Query: 295 TLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGER 354
+ +++ GR K YS +K+ + R +++ DVLGLRVI T EV +
Sbjct: 231 DAEGIPAEIT--GRRKHLYSIYRKMEQKQRSFDQIFDVLGLRVI---------TDEVMQ- 278
Query: 355 ACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEM 414
CY +I S+W+ +P DYIA PK + Y+SLH AV V +GK PL EIQIRT +M
Sbjct: 279 -CYAALGVIHSIWRPIPGEFDDYIAMPKESMYQSLHTAV-VGLDGK--PL-EIQIRTRDM 333
Query: 415 DMLAVNGTASHAFYKGGLTNPEEAK 439
+A G A+H YK G E A+
Sbjct: 334 HEVAEYGIAAHWRYKEGKKANEAAE 358
>gi|310778489|ref|YP_003966822.1| (p)ppGpp synthetase I SpoT/RelA [Ilyobacter polytropus DSM 2926]
gi|309747812|gb|ADO82474.1| (p)ppGpp synthetase I, SpoT/RelA [Ilyobacter polytropus DSM 2926]
Length = 718
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/320 (33%), Positives = 165/320 (51%), Gaps = 33/320 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ V+ +L +++MD + I AG+L +VE +++ + G A L+ + V
Sbjct: 50 IEVSKILINMKMDTDTIVAGILHDIVEDTLITVSDIEYNFGNSVAKLV-------DGVT- 101
Query: 174 KLQVLDDETAAA---LRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVM 229
KL VL T +RK + DIR +I+ LA RL MR L Y+P ++Q IS E +
Sbjct: 102 KLSVLPKGTKKQHENIRKMIVAMAQDIRVVIIKLADRLHNMRTLKYMPAHKQERISRETL 161
Query: 230 KIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQC 289
+I APLAH + + ELEDLS YL P Y + + S + + + K+++ +
Sbjct: 162 EIFAPLAHRLGMAMIKCELEDLSLYYLEPEIYRELVKLINSKKAEREKYTEATKKEIEKF 221
Query: 290 LKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTS 349
L + + V GR K YS KK+ + G+ +E+ D++ LR+I++
Sbjct: 222 LLENNIKGE------VSGRPKHFYSIYKKMYEKGKEFDEIYDLIALRIIVET-------- 267
Query: 350 EVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQI 409
E CY ++ +K +P R KDYIA PK+NGY+S+H + V GK +E+QI
Sbjct: 268 ---EGECYNVLGVLHGNYKPVPGRFKDYIAVPKSNGYQSIHTTI-VGPQGK---FIEVQI 320
Query: 410 RTEEMDMLAVNGTASHAFYK 429
RTEEM +A G A+H YK
Sbjct: 321 RTEEMHGIAEEGVAAHWSYK 340
>gi|21911237|ref|NP_665505.1| (p)ppGpp synthetase [Streptococcus pyogenes MGAS315]
gi|21905450|gb|AAM80308.1| (p)ppGpp synthetase [Streptococcus pyogenes MGAS315]
Length = 720
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 169/324 (52%), Gaps = 26/324 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +LADL +DA ++ G L VVE +++ ++ G ++ ++
Sbjct: 32 IVHPIQVAGILADLHLDAVTVACGFLHDVVEDTDITLDEIEADFGQDARDIVDGVTKLGK 91
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E
Sbjct: 92 ---VEYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRET 148
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLAH + + + +ELEDL+FRYL + + ++ + L+ E ++
Sbjct: 149 MEIYAPLAHRLGISRIKWELEDLAFRYLNETEFYKISHMMKEKRREREALV----EAIVS 204
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+KT T L D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 205 KVKTYTTQQGLFGD--VYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCVMETQSDV--- 259
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQ
Sbjct: 260 --------YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQ 306
Query: 409 IRTEEMDMLAVNGTASHAFYKGGL 432
IRT++M +A G A+H YK G+
Sbjct: 307 IRTKDMHQVAEYGVAAHWAYKKGV 330
>gi|421892632|ref|ZP_16323259.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Streptococcus
pyogenes NS88.2]
gi|379981627|emb|CCG26981.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Streptococcus
pyogenes NS88.2]
Length = 739
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 169/324 (52%), Gaps = 26/324 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +LADL +DA ++ G L VVE +++ ++ G ++ ++
Sbjct: 51 IVHPIQVAGILADLHLDAVTVACGFLHDVVEDTDITLDEIEADFGQDARDIVDGVTKLGK 110
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E
Sbjct: 111 ---VEYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRET 167
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLAH + + + +ELEDL+FRYL + + ++ + L+ E ++
Sbjct: 168 MEIYAPLAHRLGISRIKWELEDLAFRYLNETEFYKISHMMKEKRREREALV----EAIVS 223
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+KT T L D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 224 KVKTYTTQQGLFGD--VYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCVMETQSDV--- 278
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQ
Sbjct: 279 --------YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQ 325
Query: 409 IRTEEMDMLAVNGTASHAFYKGGL 432
IRT++M +A G A+H YK G+
Sbjct: 326 IRTKDMHQVAEYGVAAHWAYKKGV 349
>gi|383480647|ref|YP_005389541.1| GTP pyrophosphokinase (p)ppGpp synthetase protein RelA
[Streptococcus pyogenes MGAS15252]
gi|383494629|ref|YP_005412305.1| GTP pyrophosphokinase (p)ppGpp synthetase protein RelA
[Streptococcus pyogenes MGAS1882]
gi|378928637|gb|AFC66843.1| GTP pyrophosphokinase (p)ppGpp synthetase protein RelA
[Streptococcus pyogenes MGAS15252]
gi|378930356|gb|AFC68773.1| GTP pyrophosphokinase (p)ppGpp synthetase protein RelA
[Streptococcus pyogenes MGAS1882]
Length = 739
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 169/324 (52%), Gaps = 26/324 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +LADL +DA ++ G L VVE +++ ++ G ++ ++
Sbjct: 51 IVHPIQVAGILADLHLDAVTVACGFLHDVVEDTDITLDEIEADFGQDARDIVDGVTKLGK 110
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E
Sbjct: 111 ---VEYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRET 167
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLAH + + + +ELEDL+FRYL + + ++ + L+ E ++
Sbjct: 168 MEIYAPLAHRLGISRIKWELEDLAFRYLNETEFYKISHMMKEKRREREALV----EAIVS 223
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+KT T L D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 224 KVKTYTTQQGLFGD--VYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCVMETQSDV--- 278
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQ
Sbjct: 279 --------YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQ 325
Query: 409 IRTEEMDMLAVNGTASHAFYKGGL 432
IRT++M +A G A+H YK G+
Sbjct: 326 IRTKDMHQVAEYGVAAHWAYKKGV 349
>gi|219856114|ref|YP_002473236.1| hypothetical protein CKR_2771 [Clostridium kluyveri NBRC 12016]
gi|219569838|dbj|BAH07822.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 733
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 169/325 (52%), Gaps = 25/325 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA++ MD I AGLL +VE S + V + A+L+ ++ +
Sbjct: 55 VEVACILAEMGMDTSTIVAGLLHDIVEDTEFSREDVSREFSVEVANLVEGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A +RK L D IR +++ LA RL MR L +LP +Q + E I+
Sbjct: 112 EYKTKEEQQADNVRKMLLAMSDDIRVILIKLADRLHNMRTLKFLPVKKQKEKAKETFDIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA+ + + + +ELEDL+FRY+ Y F+ + + I EQ+++ L+
Sbjct: 172 APLAYRLGMSKIKWELEDLAFRYINQNEYYFIVRKISEKRVEREKYI----EQIIKKLRE 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ A + D ++GR K YS +K++K + +++ D+ +R+ LV+T
Sbjct: 228 NMQKAGINTD--IEGRPKHFYSIYRKMVKKNKTIDQIFDLTAVRI-------LVSTM--- 275
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY I +++K +P R KDYIA PKAN Y+SLH V + GK EIQIRT
Sbjct: 276 -KDCYAALGIAHTIYKPVPGRFKDYIAMPKANMYQSLHTTV-IGPQGKP---FEIQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEE 437
EM A G A+H YK G E+
Sbjct: 331 EMHKTAEYGIAAHWKYKEGADTAED 355
>gi|153955745|ref|YP_001396510.1| RelA protein [Clostridium kluyveri DSM 555]
gi|146348603|gb|EDK35139.1| RelA [Clostridium kluyveri DSM 555]
Length = 726
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 169/325 (52%), Gaps = 25/325 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA++ MD I AGLL +VE S + V + A+L+ ++ +
Sbjct: 48 VEVACILAEMGMDTSTIVAGLLHDIVEDTEFSREDVSREFSVEVANLVEGVTKLGK---I 104
Query: 174 KLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A +RK L D IR +++ LA RL MR L +LP +Q + E I+
Sbjct: 105 EYKTKEEQQADNVRKMLLAMSDDIRVILIKLADRLHNMRTLKFLPVKKQKEKAKETFDIY 164
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA+ + + + +ELEDL+FRY+ Y F+ + + I EQ+++ L+
Sbjct: 165 APLAYRLGMSKIKWELEDLAFRYINQNEYYFIVRKISEKRVEREKYI----EQIIKKLRE 220
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ A + D ++GR K YS +K++K + +++ D+ +R+ LV+T
Sbjct: 221 NMQKAGINTD--IEGRPKHFYSIYRKMVKKNKTIDQIFDLTAVRI-------LVSTM--- 268
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY I +++K +P R KDYIA PKAN Y+SLH V + GK EIQIRT
Sbjct: 269 -KDCYAALGIAHTIYKPVPGRFKDYIAMPKANMYQSLHTTV-IGPQGKP---FEIQIRTF 323
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEE 437
EM A G A+H YK G E+
Sbjct: 324 EMHKTAEYGIAAHWKYKEGADTAED 348
>gi|407367319|ref|ZP_11113851.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pseudomonas mandelii JR-1]
Length = 701
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 162/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + ++ + G A L+ V
Sbjct: 46 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALQAQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ + P ++ ++ K +++ +E L
Sbjct: 163 LEIYAPIANRLGMHAIRIEFEDLGFKAMHPMRSARINQAVKRARGNRKEIVNKIEESLSH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D + V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAIDGIQGE------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|386363464|ref|YP_006072795.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pyogenes Alab49]
gi|350277873|gb|AEQ25241.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pyogenes Alab49]
Length = 739
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 168/320 (52%), Gaps = 26/320 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL +DA ++ G L VVE +++ ++ G ++ ++ +
Sbjct: 55 IQVAGILADLHLDAVTVACGFLHDVVEDTDITLDEIEADFGQDARDIVDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E M+I+
Sbjct: 112 EYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELEDL+FRYL + + ++ + L+ E ++ +KT
Sbjct: 172 APLAHRLGISRIKWELEDLAFRYLNETEFYKISHMMKEKRREREALV----EAIVSKVKT 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
T L D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 228 YTTQQGLFGD--VYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCVMETQSDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQIRT+
Sbjct: 279 ----YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQIRTK 329
Query: 413 EMDMLAVNGTASHAFYKGGL 432
+M +A G A+H YK G+
Sbjct: 330 DMHQVAEYGVAAHWAYKKGV 349
>gi|257866975|ref|ZP_05646628.1| RelA/SpoT protein [Enterococcus casseliflavus EC30]
gi|257873309|ref|ZP_05652962.1| RelA/SpoT protein [Enterococcus casseliflavus EC10]
gi|257877051|ref|ZP_05656704.1| RelA/SpoT protein [Enterococcus casseliflavus EC20]
gi|257801031|gb|EEV29961.1| RelA/SpoT protein [Enterococcus casseliflavus EC30]
gi|257807473|gb|EEV36295.1| RelA/SpoT protein [Enterococcus casseliflavus EC10]
gi|257811217|gb|EEV40037.1| RelA/SpoT protein [Enterococcus casseliflavus EC20]
Length = 736
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 167/329 (50%), Gaps = 25/329 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+LQMD ++ G L VVE V++ +++ G A L+ ++ +
Sbjct: 55 IQVAGILAELQMDPHTVATGFLHDVVEDTDVTLADLKEEFGADVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK + D+R +++ LA RL MR L +L +Q I+ E M+I+
Sbjct: 112 KYKSHEEQLAENHRKMLIAMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED+S RYL P Y + +++ + Y + ++ ++
Sbjct: 172 APLAHRLGISRIKWELEDISLRYLNPQQYYRIVHLMQTKREERES----YVSETVEEIRI 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
D+ ++ GR K YS +K+ + E+ D+L +RVI+ +
Sbjct: 228 ATEELDIYAEIY--GRPKHIYSIYRKMKDQKKQFNEIYDLLAIRVIVDSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKAN Y+SLH V + G +EIQIRT
Sbjct: 278 ---CYAVLGTIHTKWKPMPGRFKDYIAMPKANMYQSLHTTV-IGPKGNP---VEIQIRTH 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRL 441
EM +A G A+H YK G T A ++
Sbjct: 331 EMHEIAEFGVAAHWAYKEGKTEKVRADKM 359
>gi|258539745|ref|YP_003174244.1| GTP pyrophosphokinase [Lactobacillus rhamnosus Lc 705]
gi|257151421|emb|CAR90393.1| GTP pyrophosphokinase [Lactobacillus rhamnosus Lc 705]
Length = 741
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/322 (34%), Positives = 167/322 (51%), Gaps = 25/322 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD E +++G L VVE +++ + + G A ++ ++ +
Sbjct: 55 IQVAGILAELKMDPETVASGYLHDVVEDTNITLGDIEEVFGHDVAVIVDGVTKLSKVTYV 114
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ DE A RK L D+R +++ LA RL MR L +L +Q I+ E ++I+
Sbjct: 115 AHK---DELAENHRKMLLAMAKDLRVIMVKLADRLHNMRTLQHLRPDKQRRIANETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + + ++LEDLS RYL P Y + + S T + I E++ +
Sbjct: 172 APLADRLGISTIKWKLEDLSLRYLNPQQYYRIAHLMNSKRTEREAYIQEAIEEIKKA--- 228
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
LADL + GR K YS KK+ + +E+ D+L +RVI + +
Sbjct: 229 ---LADLHIKYEIYGRPKHIYSIYKKMRDKHKQFDELYDLLAIRVITETIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKAN Y+S+H V + GK PL E+QIRTE
Sbjct: 278 ---CYAVLGAIHTKWKPMPGRFKDYIAMPKANLYQSIHTTV-IGPMGK--PL-EVQIRTE 330
Query: 413 EMDMLAVNGTASHAFYKGGLTN 434
EM +A G A+H YK G T+
Sbjct: 331 EMHHVAEYGVAAHWAYKEGQTS 352
>gi|139474459|ref|YP_001129175.1| GTP pyrophosphokinase [Streptococcus pyogenes str. Manfredo]
gi|134272706|emb|CAM30978.1| GTP pyrophosphokinase [Streptococcus pyogenes str. Manfredo]
Length = 743
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 169/324 (52%), Gaps = 26/324 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +LADL +DA ++ G L VVE +++ ++ G ++ ++
Sbjct: 55 IVHPIQVAGILADLHLDAVTVACGFLHDVVEDTDITLDEIEADFGQDARDIVDGVTKLGK 114
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E
Sbjct: 115 ---VEYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRET 171
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLAH + + + +ELEDL+FRYL + + ++ + L+ E ++
Sbjct: 172 MEIYAPLAHRLGISRIKWELEDLAFRYLNETEFYKISHMMKEKRREREALV----EAIVS 227
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+KT T L D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 228 KVKTYTTQQGLFGD--VYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCVMETQSDV--- 282
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQ
Sbjct: 283 --------YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQ 329
Query: 409 IRTEEMDMLAVNGTASHAFYKGGL 432
IRT++M +A G A+H YK G+
Sbjct: 330 IRTKDMHQVAEYGVAAHWAYKKGV 353
>gi|302784096|ref|XP_002973820.1| hypothetical protein SELMODRAFT_100367 [Selaginella moellendorffii]
gi|300158152|gb|EFJ24775.1| hypothetical protein SELMODRAFT_100367 [Selaginella moellendorffii]
Length = 542
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/330 (33%), Positives = 166/330 (50%), Gaps = 35/330 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIG-------IGTAHLLH 162
LT + A+LLA +A V++AGLL ++ + Q+R G +G + +
Sbjct: 41 LTHCVETAILLASAGAEATVVAAGLLHDTLDDSSIDEAQIRAIFGDDVADLVVGVSKISQ 100
Query: 163 ESLRVKNNVNLKLQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQL 222
S ++N N+ + L+ A LR L D+R +++ LA RL MR L+ L +Q
Sbjct: 101 LSQLARDN-NIASKTLE---ADRLRTMFLAMVDVRVVLIKLADRLHNMRTLEALAAEKQN 156
Query: 223 MISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIY 282
I+ E ++I P+A+ + E+EDL F+YL P Y + L G L I
Sbjct: 157 RIASETLEILVPIANRLGIWSWKAEMEDLCFKYLNPTEYQELAAKLIECCRGGVVLSAI- 215
Query: 283 KEQLLQCL-KTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKP 341
EQL + L K+ + DL GR K+ +S K+ K GR +E+ DV GLR+I+K
Sbjct: 216 -EQLDKALRKSKIKIEDLC------GRSKTLFSIYTKMKKKGRSIDEIYDVRGLRLIVKD 268
Query: 342 SSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKT 401
++ CY E + LW +P + KDYI +PKANGY+SLH V +GK
Sbjct: 269 EAD-----------CYKALEFVHKLWDHIPGKLKDYIKQPKANGYQSLHTVV----SGKD 313
Query: 402 RPLMEIQIRTEEMDMLAVNGTASHAFYKGG 431
+E+QIRT+EM A G A+H YK G
Sbjct: 314 GLPLEVQIRTKEMHSHAEFGMAAHWRYKEG 343
>gi|260583901|ref|ZP_05851649.1| GTP diphosphokinase [Granulicatella elegans ATCC 700633]
gi|260158527|gb|EEW93595.1| GTP diphosphokinase [Granulicatella elegans ATCC 700633]
Length = 738
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 163/325 (50%), Gaps = 25/325 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +LA+L++D + I+ G L VVE G +I+ + G A L+ ++
Sbjct: 51 IVHPIQVAGILAELRLDPDTIATGFLHDVVEDTGFTIEDIEYVFGKDVAFLVDGVTKLGK 110
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+K + +++ A RK L D+R +++ LA RL +R L + +Q MI+ E
Sbjct: 111 ---IKYKSHEEQQAENHRKMLLAMANDLRVIMVKLADRLHNLRTLKFHKPEKQRMIANET 167
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+APLAH + N + +ELED S RYL P Y + + S + I
Sbjct: 168 LEIYAPLAHRLGMNKIKWELEDTSLRYLNPQQYYRIVQLMDSKRDEREAYIH------ET 221
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ + +L + + GR K YS +K+ + E+ D+L +RV LVN+
Sbjct: 222 VVNIEEATKELEIEAEIYGRPKHIYSIYRKMKDKKKDFNEIYDLLAIRV-------LVNS 274
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY I + WK MP R KDYIA PKAN Y+S+H V + GK +EIQ
Sbjct: 275 I----RDCYAVVGAIHTKWKPMPRRFKDYIAMPKANMYQSIHTTV-IGPGGKP---VEIQ 326
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLT 433
IRT EM +A G A+H YK G T
Sbjct: 327 IRTFEMHAVAEYGVAAHWAYKEGNT 351
>gi|409436619|ref|ZP_11263789.1| bifunctional (p)ppGpp synthetase II and guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Rhizobium
mesoamericanum STM3625]
gi|408751543|emb|CCM74943.1| bifunctional (p)ppGpp synthetase II and guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Rhizobium
mesoamericanum STM3625]
Length = 747
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 166/328 (50%), Gaps = 34/328 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ L VA +L D+ +D I+ LL +E + ++ + G L+ ++K
Sbjct: 46 ISHPLEVAAILTDMHLDESTIAVALLHDTIEDTTATRAEIDELFGEDIGRLVEGLTKIKK 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L L + A LRK L D +R L++ LA RL MR LD++ ++ IS E
Sbjct: 106 ---LDLVTKKAKQAENLRKLLLAISDDVRVLLVKLADRLHNMRTLDHMSPEKRARISEET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYK--EQL 286
M I+APLA + + ELEDLSFR++ P +Y ET ++ L ++ K E L
Sbjct: 163 MDIYAPLAGRMGMQDMREELEDLSFRHINPEAY----------ETVTRRLEELSKRNEGL 212
Query: 287 LQCLKT---DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSS 343
++ ++T D +A+ + D V+GR K YS +K+ E+++DV G R+I+
Sbjct: 213 VKKIETELGDLLVANGLTDAIVKGRQKKPYSVFRKMQSKSLSFEQLSDVYGFRIIVDDIP 272
Query: 344 NLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRP 403
ACY I+ + W+ +P R KDYI+ PK N YRSLH + G +R
Sbjct: 273 -----------ACYRALGIVHTRWRVVPGRFKDYISTPKQNDYRSLHTTI----VGPSRQ 317
Query: 404 LMEIQIRTEEMDMLAVNGTASHAFYKGG 431
+E+QIRT+ M +A G A+H YK G
Sbjct: 318 RIELQIRTKRMHEIAEFGIAAHTLYKDG 345
>gi|171778853|ref|ZP_02919915.1| hypothetical protein STRINF_00774 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|379704558|ref|YP_005203017.1| GTP pyrophosphokinase (stringent response) [Streptococcus
infantarius subsp. infantarius CJ18]
gi|171282499|gb|EDT47923.1| RelA/SpoT family protein [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|374681257|gb|AEZ61546.1| GTP pyrophosphokinase (stringent response) [Streptococcus
infantarius subsp. infantarius CJ18]
Length = 740
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 174/347 (50%), Gaps = 26/347 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +LADL +D ++ G L VVE V++ + G ++ ++
Sbjct: 51 IVHPIQVAGILADLHLDVVTVACGFLHDVVEDTEVTLDDIEAEFGKDVRDIVDGVTKLGK 110
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E
Sbjct: 111 ---VEYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRET 167
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLAH + + + +ELEDLSFRYL + + + + L+D ++++
Sbjct: 168 MEIYAPLAHRLGISRIKWELEDLSFRYLNEIEFYKISHMMNEKRREREALVD----EIVK 223
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+K L D V GR K YS +K+ + +++ D++ +R I++ S++
Sbjct: 224 KIKDYTEEQGLYGD--VYGRPKHIYSIYRKMRDKKKRFDQIYDLIAIRCIMETPSDV--- 278
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQ
Sbjct: 279 --------YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQ 325
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALR 455
IRT+EM +A G A+H YK G+ +++ M EL L+
Sbjct: 326 IRTKEMHQVAEYGVAAHWAYKKGIKGKVDSQEQAVGMSWIKELVELQ 372
>gi|119503536|ref|ZP_01625619.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [marine gamma
proteobacterium HTCC2080]
gi|119460598|gb|EAW41690.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [marine gamma
proteobacterium HTCC2080]
Length = 739
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 160/321 (49%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LA++ MD + + A LL +E GV+ + + + G A L+ V
Sbjct: 82 VTHPLAVASVLAEMHMDHQSLMAALLHDTIEDTGVTKEDIGAQFGAEVAELVDG---VSK 138
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+++ L+ + A +K L DIR +++ LA RL MR L L R + I+ E
Sbjct: 139 LTHIEFDSLEHKQAENFQKMALAMARDIRVILVKLADRLHNMRTLGVLSREKIKRIAGET 198
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+AP+A + N + ELEDL+F+ L+P +D +RS K LI+ + Q+
Sbjct: 199 LDIYAPIALRLGMNSVRMELEDLAFKALYPMRARRIDAAIRSAGGNRKSLINQVRNQVKT 258
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L D ++ GR K YS K+ + E+ D+ R+I++ +
Sbjct: 259 ALSRDELQGRVI------GREKHLYSIYSKMKAKRKSFSEIMDIFAFRIIVESVDD---- 308
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY ++ SL+K +P DYIA PKANGY+SLH + G +EIQ
Sbjct: 309 -------CYRVLGVVHSLYKPVPGEFSDYIAIPKANGYQSLHTVL----KGMHGIPVEIQ 357
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 358 IRTREMEDMANNGIAAHWLYK 378
>gi|428770116|ref|YP_007161906.1| (p)ppGpp synthetase I SpoT/RelA [Cyanobacterium aponinum PCC 10605]
gi|428684395|gb|AFZ53862.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanobacterium aponinum PCC
10605]
Length = 751
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 168/321 (52%), Gaps = 24/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ ++VA LL DL D+E+I+AG L VVE + + + G L+ E++ +
Sbjct: 63 IAHPIAVAELLRDLGGDSEMIAAGFLHDVVEDTPTTPEDIEVMFGKNVRQLV-EAVTKLS 121
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
N + + A R+ F DIR +++ LA RL MR LD+LP +Q +I+ E
Sbjct: 122 KFNFSSKT--ERQAENFRRMFIAMAQDIRVIVVKLADRLHNMRTLDFLPPEKQRLIAEET 179
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+I APLA+ + + +ELEDLSF+YL P +Y + + T + I+ + + Q
Sbjct: 180 KEIFAPLANRLGIWHFKWELEDLSFKYLHPEAYNKIKNLIAERRTDREARIENVIDTINQ 239
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L+ + V V+GR K Y K+++ + E++ D+ +R+I VNT
Sbjct: 240 RLENLG-----IHPVEVKGRPKHLYGIYHKMMRQKKEFEQIYDIAAVRII-------VNT 287
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
++ CY T ++ ++ +P R KDYI PK N Y+SLH V V+ NG RPL EIQ
Sbjct: 288 ND----ECYRTLAVVHDAFRPIPGRFKDYIGLPKPNLYQSLHTTV-VNSNG--RPL-EIQ 339
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM +A G A+H YK
Sbjct: 340 IRTLEMHYVAEYGIAAHWKYK 360
>gi|357112304|ref|XP_003557949.1| PREDICTED: GTP pyrophosphokinase-like [Brachypodium distachyon]
Length = 890
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/338 (32%), Positives = 175/338 (51%), Gaps = 26/338 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVE-SGGVSIQQVRDRIGIGTAHLLHE--------S 164
+ VA +L + ++D E I+AGLL VE + V+ + +++ G ++
Sbjct: 187 VEVARILGEHELDWESIAAGLLHDTVEDTDMVTFETIQNEFGATVRRIVEGETKVSKLGK 246
Query: 165 LRVKNNVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLM 223
L+ KN + K D A LR+ F ++R +I+ LA RL MR L ++P+++Q
Sbjct: 247 LQCKNECSSK----QDVKAEDLRQMFLAMTEEVRVIIVKLADRLHNMRTLTHMPQHKQYA 302
Query: 224 ISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFP--FSYL--FVDTWLRSHETGSKPLI 279
I++E +++ APLA + + ELE LSF Y+ P F+ L V+ ++HE +
Sbjct: 303 IAMETLQVFAPLAKLLGMYQIKSELEYLSFMYMNPGDFTELRKRVEDIFKAHEQELEEAN 362
Query: 280 DIYKEQLLQCLKTDATLADLVE-DVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVI 338
I K+++ + DLV + V+ K YS + LK EVN V LR+I
Sbjct: 363 RILKQKI-----AEDQFLDLVSVETEVRSVCKELYSIYRTALKSKSSINEVNQVAQLRII 417
Query: 339 IKP-SSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSD 397
IKP S N V ++ CY ++ +W +P KDYIA PK NGY+SLH V
Sbjct: 418 IKPKSCNGVGPLCTAQQICYHVLGLVHGIWTPIPQAVKDYIATPKPNGYQSLHTTVIPFL 477
Query: 398 NGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNP 435
N ++ +E+QIRTE+MDM+A G A+H +G ++ P
Sbjct: 478 N-ESMFHLEVQIRTEDMDMIAERGIAAHYSGRGVVSGP 514
>gi|451343601|ref|ZP_21912672.1| RelA/SpoT family protein [Eggerthia catenaformis OT 569 = DSM
20559]
gi|449337698|gb|EMD16855.1| RelA/SpoT family protein [Eggerthia catenaformis OT 569 = DSM
20559]
Length = 738
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/330 (34%), Positives = 168/330 (50%), Gaps = 30/330 (9%)
Query: 106 SRSPLTKAL-SVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHES 164
S P T L VA +LA LQ + I+AG L V+E V ++ +R G L+
Sbjct: 51 SGEPYTVHLIWVAYILATLQTGPKTIAAGFLHDVMEDCNVPHDEMVERFGEEITTLVEGV 110
Query: 165 LRVKNNVNLKLQVLDDET--AAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQ 221
++ K+ +++ A RK + DIR +++ LA RL MR L ++P +Q
Sbjct: 111 TKIN-----KMPYMEESEIYAENHRKIYIAMAKDIRVILIKLADRLHNMRTLQFMPSEKQ 165
Query: 222 LMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDI 281
IS E ++++AP+AH + N + ELEDL YL P +Y + L + K +D
Sbjct: 166 QRISRETLEVYAPIAHRLGINDIRIELEDLCLSYLDPKAYKEIADLLEQKRSERKEAVDH 225
Query: 282 YKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKP 341
+E + + L+ + ++GR K YS KK++ + +E+ D+ LR+I+K
Sbjct: 226 MRESVEKLLQEHHI------EYRIKGRAKHIYSIYKKMVIKHKRFDELYDLNALRIILK- 278
Query: 342 SSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKT 401
N E CY II ++ +P R KDYIA PK N Y+SLH AV + + G+
Sbjct: 279 -----NKVE-----CYEVLGIIHEKYRPLPGRFKDYIAMPKPNMYQSLHTAV-IGEGGQ- 326
Query: 402 RPLMEIQIRTEEMDMLAVNGTASHAFYKGG 431
+ EIQIRTEEMD LA G ASH YK G
Sbjct: 327 --IFEIQIRTEEMDELAERGVASHWRYKEG 354
>gi|339635160|ref|YP_004726801.1| GTP pyrophosphokinase [Weissella koreensis KACC 15510]
gi|338854956|gb|AEJ24122.1| GTP pyrophosphokinase [Weissella koreensis KACC 15510]
Length = 744
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/321 (36%), Positives = 169/321 (52%), Gaps = 28/321 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL MD + + AG L VVE ++ + DR G A ++ ++ +
Sbjct: 55 IQVAGILADLHMDPDTVIAGYLHDVVEDTPAELEDIVDRFGEDVAAIVDGVSKISK---I 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + + A RK L +DIR + + LA RL +R LD L +Q I+ E ++I+
Sbjct: 112 EYKSDSERLAENHRKLLLAMSHDIRVIFVKLADRLHNIRTLDALNPAKQKRIAGETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFV--DTWLRSHETGSKPLIDIYKEQLLQCL 290
APLA + + +ELED S RYL +Y + D LR +E ++I + +
Sbjct: 172 APLADRLGIMTIKWELEDTSLRYLDYEAYHAIAQDMQLRRNER-----LEIVATAVDEIK 226
Query: 291 KTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSE 350
T L +++VSV GR K YS +K+ K + EE+ D+L +RVI+ +
Sbjct: 227 VTIDNLK--LKNVSVYGRPKHIYSIYRKMQKKQKAFEEIYDLLAIRVIV---------NS 275
Query: 351 VGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIR 410
+G+ CY I S W MP R KDYIA PKANGY+SLH +V + G RPL EIQIR
Sbjct: 276 IGD--CYAVLGAIHSHWTPMPGRFKDYIALPKANGYQSLHTSV-IGPEG--RPL-EIQIR 329
Query: 411 TEEMDMLAVNGTASHAFYKGG 431
T +M +A G A+H YK G
Sbjct: 330 THDMHEVAEFGVAAHWAYKEG 350
>gi|51245017|ref|YP_064901.1| GTP pyrophosphokinase [Desulfotalea psychrophila LSv54]
gi|50876054|emb|CAG35894.1| probable GTP pyrophosphokinase [Desulfotalea psychrophila LSv54]
Length = 727
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/318 (35%), Positives = 161/318 (50%), Gaps = 27/318 (8%)
Query: 116 VALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRV-KNNVNLK 174
V LA +Q+D + I A LL ++ G V I ++RD G A ++ + R+ K N K
Sbjct: 57 VGATLASMQLDLDTILAALLHGTIKHG-VEITELRDAFGDDVASIVEGASRITKVQYNNK 115
Query: 175 LQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHA 233
L A +RK L DIR L++ L RL + +L+ LPR +QL I+ E M ++A
Sbjct: 116 LV----GQAEGVRKMLLAIAADIRVLLVRLVDRLTDLFNLEKLPRERQLEIAWETMNLYA 171
Query: 234 PLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTD 293
PLA + ++L ELED SFR+L+P Y + + S S + Y ++L LK
Sbjct: 172 PLASRLGIDWLKRELEDNSFRFLYPDEYAELSRDMES----SLEERESYVAEMLATLKGK 227
Query: 294 ATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGE 353
D + + V GR K YS KKL+ ++V D + R+I+
Sbjct: 228 LEEND-IHPLRVLGRPKHLYSIYKKLVAQNIKLDKVYDKVAFRIIVDSV----------- 275
Query: 354 RACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEE 413
+ CY T +I W +P R KD+I+ PKAN Y+S+H V G +EIQIRTEE
Sbjct: 276 KECYETLGVIHGEWAPVPGRIKDFISVPKANNYQSMHTTV----AGPCGHFIEIQIRTEE 331
Query: 414 MDMLAVNGTASHAFYKGG 431
MD +A G A+H YK G
Sbjct: 332 MDRVASEGVAAHWAYKEG 349
>gi|81428351|ref|YP_395351.1| GTP pyrophosphokinase [Lactobacillus sakei subsp. sakei 23K]
gi|78609993|emb|CAI55041.1| GTP pyrophosphokinase [Lactobacillus sakei subsp. sakei 23K]
Length = 743
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/320 (33%), Positives = 171/320 (53%), Gaps = 25/320 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD +++G L VVE +++ V++ G A ++ ++ +
Sbjct: 55 IQVAGILAELKMDPATVASGYLHDVVEDTNITLGDVQEMFGQDVAVIVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + ++ A RK L D+R +++ LA RL MR L +L +Q I+ E ++I+
Sbjct: 112 KYKSHQEQLAENHRKMLLAMAKDLRVIMVKLADRLHNMRTLKHLKPEKQRRIANETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + + +ELED+S RYL P Y + + S T + Y ++ ++ +K
Sbjct: 172 APLADRLGISKIKWELEDISLRYLNPQQYYRIVHLMNSKRTQREA----YIQEAIEDIKD 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
++ADL + + GR K YS +K+ + EE+ D+L +RV++ +
Sbjct: 228 --SVADLDMNYEIYGRPKHLYSIYRKMRDQHKQFEELYDLLAIRVVVDSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKAN Y+S+H V + GK PL E+QIRT+
Sbjct: 278 ---CYAVLGAIHTKWKPMPGRFKDYIAMPKANMYQSIHTTV-IGPKGK--PL-EVQIRTQ 330
Query: 413 EMDMLAVNGTASHAFYKGGL 432
EM +A G A+H YK G+
Sbjct: 331 EMHNVAEYGVAAHWAYKEGV 350
>gi|398876631|ref|ZP_10631785.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM67]
gi|398204124|gb|EJM90933.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM67]
Length = 701
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 162/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + ++ + G A L+ V
Sbjct: 46 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALQAQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ + P ++ ++ K +++ +E L
Sbjct: 163 LEIYAPIANRLGMHAIRIEFEDLGFKAMHPMRSARINQAVKRARGNRKEIVNKIEESLGH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D + V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAIDGIQGE------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|398884808|ref|ZP_10639734.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM60]
gi|398193530|gb|EJM80630.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM60]
Length = 701
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 162/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + ++ + G A L+ V
Sbjct: 46 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALQAQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ + P ++ ++ K +++ +E L
Sbjct: 163 LEIYAPIANRLGMHAIRIEFEDLGFKAMHPMRSARINQAVKRARGNRKEIVNKIEESLGH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D + V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAIDGIQGE------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|150395901|ref|YP_001326368.1| (p)ppGpp synthetase I SpoT/RelA [Sinorhizobium medicae WSM419]
gi|150027416|gb|ABR59533.1| (p)ppGpp synthetase I, SpoT/RelA [Sinorhizobium medicae WSM419]
Length = 741
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 166/321 (51%), Gaps = 24/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ L VA +L ++ +D I+ LL +E + Q++ G L+ ++K
Sbjct: 46 ISHPLEVAAILTEMHLDESTIAVALLHDTIEDTTATRQEIDGLFGEDIGALVEGLTKIKK 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L L + A LRK L D +R L++ LA RL MR LD++ ++ IS E
Sbjct: 106 ---LDLVTKKAKQAENLRKLLLAISDDVRVLLVKLADRLHNMRTLDHMSAEKRARISEET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M I+APLA + + ELE+LSFR++ P +Y V L+ ++ LI +E+L +
Sbjct: 163 MDIYAPLAGRMGMQDMREELENLSFRHINPEAYETVTRRLQELSERNEGLIKKIEEELSE 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L+ A+ + D V+GR K YS +K+ E+++DV G R+I+
Sbjct: 223 LLQ-----AEGLADAQVKGRQKKPYSVFRKMQSKSLSFEQLSDVWGFRIIV--------- 268
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
S++ ACY I+ + W+ +P R KDYI+ PK N Y+S+H + G +R +E+Q
Sbjct: 269 SDIP--ACYRALGIVHTRWRVVPGRFKDYISTPKQNDYQSIHTTI----IGPSRQRIELQ 322
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT+ M +A G A+HA YK
Sbjct: 323 IRTKRMHEIAEYGIAAHALYK 343
>gi|398860397|ref|ZP_10616045.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM79]
gi|398999562|ref|ZP_10702298.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM18]
gi|398131597|gb|EJM20913.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM18]
gi|398234674|gb|EJN20535.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM79]
Length = 701
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 162/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + ++ + G A L+ V
Sbjct: 46 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALQAQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ + P ++ ++ K +++ +E L
Sbjct: 163 LEIYAPIANRLGMHAIRIEFEDLGFKAMHPMRSARINQAVKRARGNRKEIVNKIEESLSH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D + V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAIDGIQGE------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|398837633|ref|ZP_10594925.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM102]
gi|398900708|ref|ZP_10649695.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM50]
gi|398118648|gb|EJM08378.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM102]
gi|398180537|gb|EJM68115.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM50]
Length = 701
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 162/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + ++ + G A L+ V
Sbjct: 46 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALQAQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ + P ++ ++ K +++ +E L
Sbjct: 163 LEIYAPIANRLGMHAIRIEFEDLGFKAMHPMRSARINQAVKRARGNRKEIVNKIEESLSH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D + V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAIDGIQGE------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|86606590|ref|YP_475353.1| RelA/SpoT family protein [Synechococcus sp. JA-3-3Ab]
gi|86555132|gb|ABD00090.1| RelA/SpoT family protein [Synechococcus sp. JA-3-3Ab]
Length = 760
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 170/327 (51%), Gaps = 24/327 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ ++VA LL +L DA ++AGLL VVE V+++ + G LL E + +
Sbjct: 75 IAHPVAVASLLRELGGDAVTVAAGLLHDVVEDTEVTLEALEAEFG-PEVRLLVEGVTKLS 133
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
N + ++ A R+ F DIR +++ LA RL MR L YLP ++Q I+ E
Sbjct: 134 QFNFSSKT--EQQAENFRRMFVAMAKDIRVIVVKLADRLHNMRTLQYLPPHKQKQIAAET 191
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I APLA+ + + +ELEDL+F+YL +Y + + + + + I + E+L +
Sbjct: 192 MEIFAPLANRLGIWHFKWELEDLAFKYLDYEAYRQIQELVNAKRSEREAEIQAFIEELRK 251
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L + +E + GR K Y +K+ + + E+ D+L +RVI++ S
Sbjct: 252 HL-----IQGGLEHFEISGRPKHLYGIYRKMQQQRKEFHEIYDLLAVRVIVQTVSE---- 302
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY ++ + ++ +P R KDYI PKAN Y+SLH AV + G RP +E+Q
Sbjct: 303 -------CYRVLAVVHNCFRPIPGRFKDYIGLPKANRYQSLHTAV-IGLQG--RP-VEVQ 351
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNP 435
IRTEEM +A G A+H YK + P
Sbjct: 352 IRTEEMHRVAEYGIAAHWKYKEAGSTP 378
>gi|255022101|ref|ZP_05294105.1| GTP pyrophosphokinase, (p)ppGpp synthetase II /
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Acidithiobacillus caldus ATCC 51756]
gi|340782710|ref|YP_004749317.1| GTP pyrophosphokinase, (p)ppGpp synthetase II /
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Acidithiobacillus caldus SM-1]
gi|254968459|gb|EET26017.1| GTP pyrophosphokinase, (p)ppGpp synthetase II /
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Acidithiobacillus caldus ATCC 51756]
gi|340556861|gb|AEK58615.1| GTP pyrophosphokinase, (p)ppGpp synthetase II /
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Acidithiobacillus caldus SM-1]
Length = 733
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 174/341 (51%), Gaps = 25/341 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
++VA +LA+L++D + A LL V+E GVS +++ +R G A L+ V +
Sbjct: 61 VAVACILAELRLDIASVQAALLHDVIEDCGVSKEEIAERFGAEVAELVDG---VSKLGQV 117
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + ++ A RK F DIR +++ LA RL MR + + ++ IS E + I+
Sbjct: 118 RFETREEAQAENFRKMFLAMSRDIRVVLIKLADRLHNMRTMGVMSAEKRRRISRETLDIY 177
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+A + + ELE+L+F +L+P + + +++ K + ++ + + L+
Sbjct: 178 APIAQRLGIQAIRIELEELAFSHLYPKRWHALSDAIKAARGNRKEAVQKIEQIIAERLRQ 237
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+A + + V GR K YS +K+ G ++D+ R+I+K V+T
Sbjct: 238 EAIVGE------VSGREKHVYSIYRKMQAKGLPFSAIHDLHAFRIIVKD----VDT---- 283
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I+ SL++ +P R KDYIA PK+NGY+SLH + G +EIQIRTE
Sbjct: 284 ---CYRVLGIVHSLFRPLPGRFKDYIAIPKSNGYQSLHTVL----LGPFGHPVEIQIRTE 336
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAA 453
+M +A G A+H YK G N + +A + EL A
Sbjct: 337 DMHRVAEAGVAAHWLYKSGAQNAHAEAQARAWLQRLLELQA 377
>gi|89094556|ref|ZP_01167494.1| GTP pyrophosphokinase [Neptuniibacter caesariensis]
gi|89081155|gb|EAR60389.1| GTP pyrophosphokinase [Oceanospirillum sp. MED92]
Length = 754
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 164/336 (48%), Gaps = 29/336 (8%)
Query: 103 SPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLH 162
+ +S + L +A +LADL D E + A +L + V + I++VR + G A ++
Sbjct: 59 AENSHNSYRTGLEMAQILADLHSDQETLIAAILYRGVRERKIPIERVRKQFGKSIAQMIM 118
Query: 163 ESLRV-----KNNVNLKLQVLDDETAAA--LRKFCLTYYD-IRALILDLAIRLDMMRHLD 214
L++ + N + VL +T +RK + D +R ++ +A R +R +
Sbjct: 119 GVLQMAAIGSRKNPRIDDSVLGSDTTQMDNVRKMLVAMIDDVRVALIKIAERTCAIRGVK 178
Query: 215 YLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETG 274
R ++ +++ EV I+APLAH + ++ +ELEDLSFRYL P Y + L
Sbjct: 179 DGSRRKRYLVAREVFDIYAPLAHRLGIGHIKWELEDLSFRYLKPNDYKHIAQLLDEKRLD 238
Query: 275 SKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLG 334
+ ID L+ ++ L + D V GR K YS +K+ + +V DV
Sbjct: 239 RQEYIDRV------VLRLESELEGVNIDGDVSGRAKHIYSIWRKMQRKNIEFSQVYDVRA 292
Query: 335 LRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVD 394
+R+++ S R CY I+ SLW+ +PH DY+A PK NGYRSLH AV
Sbjct: 293 VRILVPHS-----------RDCYAVLGIVHSLWRNIPHEFDDYVASPKPNGYRSLHTAV- 340
Query: 395 VSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKG 430
G ++EIQIRT +M A G +H YKG
Sbjct: 341 ---FGPEGKVLEIQIRTYDMHEEAELGVCAHHLYKG 373
>gi|343127517|ref|YP_004777448.1| relA/SpoT family protein [Borrelia bissettii DN127]
gi|342222205|gb|AEL18383.1| relA/SpoT family protein [Borrelia bissettii DN127]
Length = 667
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 175/357 (49%), Gaps = 41/357 (11%)
Query: 86 LFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVS 145
+FKAL+++ L + + V+L LA Q+D + AGLL V+E +
Sbjct: 40 IFKALEIA-EQLHYGQYRESGEPYIIHPIMVSLFLAKFQLDFKATIAGLLHDVLEDTNIE 98
Query: 146 IQQVRDRI---------GIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRKFCLTYYDI 196
+++ G+ H LH R N ++ F +T+ DI
Sbjct: 99 KEEIVKEFDEEILSLIDGVTKIHDLHNKTRSIKEANTISKMF----------FAMTH-DI 147
Query: 197 RALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYL 256
R +I+ LA +L M L YLP+ +Q I+ + + + P+A + + L LEDLSF++L
Sbjct: 148 RIIIIKLADKLHNMTTLSYLPKNRQDRIAKDCLSTYVPIAERLGISSLKTYLEDLSFKHL 207
Query: 257 FPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTM 316
+P Y + +L ET + +YK +L ++ + + + +++V R K YS
Sbjct: 208 YPKDYKEIKNFLS--ETKIEREKKLYKGKL--SIEKELQKSGIEAEITV--RSKHFYSIF 261
Query: 317 KKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKD 376
+K+ ++ D LG+R+I K ++ CY EI+ +WK +P R KD
Sbjct: 262 RKMQTRTNKLTQIFDTLGIRIICKK-----------QKECYEILEIVHRVWKPIPGRLKD 310
Query: 377 YIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGGLT 433
YIA PK N Y+SLH V + ++ + L+EIQIRTEEMD +A G A+H YK +T
Sbjct: 311 YIASPKENNYQSLHTTVRIPEDNQ---LIEIQIRTEEMDRIANYGVAAHWIYKEQIT 364
>gi|410667595|ref|YP_006919966.1| GTP pyrophosphokinase RelA [Thermacetogenium phaeum DSM 12270]
gi|409105342|gb|AFV11467.1| GTP pyrophosphokinase RelA [Thermacetogenium phaeum DSM 12270]
Length = 726
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/331 (33%), Positives = 171/331 (51%), Gaps = 27/331 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L VA +LADLQ+D I AGLL VVE S+Q + G L+ ++ +
Sbjct: 49 LQVACILADLQLDITSIVAGLLHDVVEDTNTSLQDIETDFGPEVRFLVAGVTKLGK---I 105
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +D A LRK F DIR +++ LA RL +R L +Q I+ E ++I
Sbjct: 106 EYKSKEDRHAENLRKMFLAMARDIRVILIKLADRLHNLRTLGAHEVPKQREIARETLEIF 165
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+AH + + +E+EDL+FRYL P Y + + + I++ ++ L+
Sbjct: 166 APVAHRLGIYKIKWEMEDLAFRYLEPDKYYELADRIAKKRKEREDYINL----VITKLRE 221
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
T A + ++S GR K+ YS +K++ G+ E+ D++ +RVI++
Sbjct: 222 KLTEAGIKAEIS--GRPKNFYSIYRKMVDQGKDLSEIYDLVAVRVIVETV---------- 269
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY T I+ ++WK +P R KDYIA PK N Y+SLH + V G+ E+QIRT
Sbjct: 270 -KECYATLGIVHTMWKPIPGRFKDYIAMPKQNMYQSLHTTL-VGPLGEP---FELQIRTF 324
Query: 413 EMDMLAVNGTASHAFYKGG--LTNPEEAKRL 441
EM A G A+H YK G L +PE K+L
Sbjct: 325 EMHRTAEYGIAAHWRYKEGGRLNDPEFEKKL 355
>gi|365898364|ref|ZP_09436325.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Bradyrhizobium sp.
STM 3843]
gi|365420889|emb|CCE08867.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Bradyrhizobium sp.
STM 3843]
Length = 761
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 163/329 (49%), Gaps = 25/329 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
T L VA +L DL++D I A LL +E + ++ G L+ ++K
Sbjct: 82 FTHPLEVAAILTDLKLDDATIVAALLHDTIEDTEATRAEIDHLFGPEIGALVEGLTKLKR 141
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+L + + A LRK L D +R L++ LA RL MR L+++P + I+ E
Sbjct: 142 ---LELVSREAKQAENLRKLLLAIADDVRVLLVKLADRLHNMRTLEFVPEASRRRIAEET 198
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+APLA + + ELEDLSFR L P +Y V L + + LI + QL +
Sbjct: 199 LDIYAPLAGRMGMQEMREELEDLSFRTLDPDAYRVVMQRLDALTDRNLDLIGEIESQLAK 258
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ + A V GR K +S K+ + E+++D+ G RVI+
Sbjct: 259 KFRDNGLTA------RVSGRRKKPFSIWTKMERKSIGFEQLSDIFGFRVIMPDVE----- 307
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
+CY I+ + W +P R KDYI+ PK N YRS+H V GK R +E+Q
Sbjct: 308 ------SCYRALGIVHTTWPVVPGRFKDYISTPKQNDYRSIHTT--VIGPGKQR--VELQ 357
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
IRT+EMD +A G A+HAFYK + +P E
Sbjct: 358 IRTQEMDQIAELGIAAHAFYKDDVGSPTE 386
>gi|354808370|ref|ZP_09041791.1| (p)ppGpp synthase/hydrolase RelA [Lactobacillus curvatus CRL 705]
gi|354513152|gb|EHE85178.1| (p)ppGpp synthase/hydrolase RelA [Lactobacillus curvatus CRL 705]
Length = 743
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/320 (33%), Positives = 170/320 (53%), Gaps = 25/320 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD +++G L VVE +++ V + G A ++ ++ +
Sbjct: 55 IQVAGILAELKMDPATVASGYLHDVVEDTNITLGDVEEMFGKDVAVIVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + ++ A RK L D+R +++ LA RL MR L +L +Q I+ E ++I+
Sbjct: 112 KYKSHQEQLAENHRKMLLAMAKDLRVIMVKLADRLHNMRTLKHLKPEKQRRIANETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + + +ELED+S RYL P Y + + S T + I ++ ++ +K
Sbjct: 172 APLADRLGISKIKWELEDISLRYLNPQQYYRIVHLMNSKRTQRESYI----QEAIEDIKD 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
++ADL + + GR K YS +K+ + EE+ D+L +RV++ +
Sbjct: 228 --SIADLDMNYDIYGRPKHLYSIYRKMRDQHKQFEELYDLLAIRVVVDSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKAN Y+S+H V + GK PL E+QIRT+
Sbjct: 278 ---CYAVLGAIHTKWKPMPGRFKDYIAMPKANMYQSIHTTV-IGPKGK--PL-EVQIRTQ 330
Query: 413 EMDMLAVNGTASHAFYKGGL 432
EM +A G A+H YK G+
Sbjct: 331 EMHDVAEYGVAAHWAYKEGV 350
>gi|115452933|ref|NP_001050067.1| Os03g0340900 [Oryza sativa Japonica Group]
gi|12583661|dbj|BAB21484.1| chloroplast RelA homologue 1 [Oryza sativa Japonica Group]
gi|108708064|gb|ABF95859.1| RelA/SpoT protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113548538|dbj|BAF11981.1| Os03g0340900 [Oryza sativa Japonica Group]
gi|222624902|gb|EEE59034.1| hypothetical protein OsJ_10786 [Oryza sativa Japonica Group]
Length = 892
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/338 (32%), Positives = 173/338 (51%), Gaps = 26/338 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVE-SGGVSIQQVRDRIGIGTAHLLHE--------S 164
+ VA +L + ++D E I+AGLL VE + V+ +++ + G+ ++
Sbjct: 189 VEVARILGEHELDWESIAAGLLHDTVEDTDMVTFERIENEFGVTVRRIVEGETKVSKLGK 248
Query: 165 LRVKNNVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLM 223
L+ KN N K D A LR+ F ++R +I+ LA RL MR L ++P+++Q
Sbjct: 249 LQCKNEGNSK----QDVKAEDLRQMFLAMTEEVRVIIVKLADRLHNMRTLTHMPQHKQYA 304
Query: 224 ISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYL----FVDTWLRSHETGSKPLI 279
I++E +++ APLA + + ELE LSF Y+ P + V+ ++HE +
Sbjct: 305 IAMETLQVFAPLAKLLGMYRIKSELEYLSFMYMNPGDFAELKKRVEDLYKAHEQELEEAN 364
Query: 280 DIYKEQLLQCLKTDATLADLVE-DVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVI 338
I E++ + DLV + V+ K YS K LK E+N V LR+I
Sbjct: 365 QILGEKI-----AEDQFLDLVSVETQVRSVCKELYSIYKTALKSKSSINEINQVAQLRII 419
Query: 339 IKP-SSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSD 397
IKP S N V ++ CY ++ +W +P KDYIA PK NGY+SLH V
Sbjct: 420 IKPKSCNGVGPLCTAQQICYHVLGLVHGIWTPIPQAVKDYIATPKPNGYQSLHTTVIPFL 479
Query: 398 NGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNP 435
N ++ +E+QIRTE+MD++A G A+H +G ++ P
Sbjct: 480 N-ESMFHLEVQIRTEDMDLIAERGIAAHYSGRGVVSGP 516
>gi|312196183|ref|YP_004016244.1| (p)ppGpp synthetase I SpoT/RelA [Frankia sp. EuI1c]
gi|311227519|gb|ADP80374.1| (p)ppGpp synthetase I, SpoT/RelA [Frankia sp. EuI1c]
Length = 902
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 168/326 (51%), Gaps = 37/326 (11%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++VA +LADL MD + A LL +E ++++Q+R++ G A ++ R++
Sbjct: 220 ITHPIAVAGILADLGMDVPTLCAALLHDTLEETTLTVEQIREQFGDQVALIVDAVSRLQ- 278
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
K+ + A +R+ + D RAL++ LA RL MR L +LP ++Q + +
Sbjct: 279 ----KVNAGEMAQAEMIRRMVIAMARDPRALVVKLADRLHNMRTLRFLPEHRQERKARQT 334
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSY-----LFVDTWLRSHETGSKPLIDIYK 283
++++APLAH + N L +ELEDLSF L+P Y L D P D+Y
Sbjct: 335 LEVYAPLAHRLGMNSLKWELEDLSFAALYPKRYDEIVRLVAD---------RAPSRDVYL 385
Query: 284 EQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSS 343
+ + ++ A +E V V GR K YS +K++ GR +++ D++G+RV++
Sbjct: 386 DDVTAQVQGYLAAAG-IESVVV-GRPKHYYSIYQKMVVRGRSFDDIYDLVGIRVLVD--- 440
Query: 344 NLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRP 403
R CY + + WK +P R KDYIA PK N Y+SLH V + GK
Sbjct: 441 --------SVRDCYAALGTVHANWKPIPGRFKDYIAMPKYNMYQSLHTTV-IGPEGKP-- 489
Query: 404 LMEIQIRTEEMDMLAVNGTASHAFYK 429
+E+QIRT M A G A+H YK
Sbjct: 490 -VELQIRTHGMHNRAEYGIAAHWKYK 514
>gi|116492882|ref|YP_804617.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Pediococcus pentosaceus ATCC 25745]
gi|421894250|ref|ZP_16324740.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Pediococcus
pentosaceus IE-3]
gi|116103032|gb|ABJ68175.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Pediococcus pentosaceus ATCC 25745]
gi|385272794|emb|CCG90112.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Pediococcus
pentosaceus IE-3]
Length = 743
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/323 (34%), Positives = 166/323 (51%), Gaps = 26/323 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD E ++AG L VE +++ + + G A ++ ++ +
Sbjct: 55 IQVAGILANLKMDPETVAAGFLHDTVEDTLITLGDIEELFGKDVAVIVDGVSKISK---I 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + ++ A RK L DIR +I+ LA RL MR L +L +Q IS E ++I+
Sbjct: 112 KYKSNQEQLAENHRKLLLAMSQDIRVIIVKLADRLHNMRTLQHLRPDKQRRISNETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + + +ELED+S RYL P Y + + S + ID +L
Sbjct: 172 APLAERLGISTIKWELEDISLRYLNPQQYYRIVHLMNSRRNQREEYIDSAISEL------ 225
Query: 293 DATLADL-VEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEV 351
+ + DL ++ + GR K YS +K++ + ++ D+L +RVI V
Sbjct: 226 KSAVEDLQLKHTEIYGRPKHIYSIYRKMVDQHKQFSQIYDLLAIRVIT-----------V 274
Query: 352 GERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRT 411
R CY I + WK +P R KDYIA PKAN Y+SLH V V G RPL EIQIRT
Sbjct: 275 SVRDCYAVLGAIHAKWKPIPGRFKDYIAMPKANMYQSLHTTV-VGPEG--RPL-EIQIRT 330
Query: 412 EEMDMLAVNGTASHAFYKGGLTN 434
+ M +A G A+H YK G+ +
Sbjct: 331 QAMHRVAEYGVAAHWAYKEGIKD 353
>gi|423092935|ref|ZP_17080731.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pseudomonas fluorescens Q2-87]
gi|397882221|gb|EJK98708.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pseudomonas fluorescens Q2-87]
Length = 701
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 162/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + ++ + G A L+ V
Sbjct: 46 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALQAQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ + P ++ ++ K +++ +E L
Sbjct: 163 LEIYAPIANRLGMHAIRIEFEDLGFKAMHPMRSARINQAVKRARGNRKEIVNKIEESLSH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D + V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAIDGIEGE------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|117928545|ref|YP_873096.1| (p)ppGpp synthetase I SpoT/RelA [Acidothermus cellulolyticus 11B]
gi|117649008|gb|ABK53110.1| (p)ppGpp synthetase I, SpoT/RelA [Acidothermus cellulolyticus 11B]
Length = 820
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/321 (34%), Positives = 161/321 (50%), Gaps = 27/321 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LA+L M I A LL VE ++ Q+R G A L+ ++
Sbjct: 128 ITHPLAVATILAELGMTPPTIVAALLHDTVEDTTYTLDQLRRDFGDEVASLVDGVTKLD- 186
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+++ D T +RK + D R L+L LA RL MR L YLP +Q + E
Sbjct: 187 ----RVKYGDAATVETVRKMVVAMARDPRVLVLKLADRLHNMRTLRYLPPEKQERKARET 242
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+APLAH + N L +ELEDLSF L+P Y + + P D Y +++
Sbjct: 243 LEIYAPLAHRLGMNTLKWELEDLSFATLYPKRYEEIARLVAER----APSRDTYLANVIE 298
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ A + +V GR K YS +K++ GR ++ D+LG+RV LV+T
Sbjct: 299 QVSAQLRAAKI--KATVTGRPKHYYSIYQKMIVRGRDFADIYDLLGVRV-------LVDT 349
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY II ++W +P R KD+IA PK N Y+SLH V + GK +E+Q
Sbjct: 350 V----RDCYAALGIIHAMWNPVPGRFKDFIAMPKFNLYQSLHTTV-IGPEGKP---VEVQ 401
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT M A G A+H YK
Sbjct: 402 IRTHAMHRRAEYGIAAHWKYK 422
>gi|319789117|ref|YP_004150750.1| (p)ppGpp synthetase I, SpoT/RelA [Thermovibrio ammonificans HB-1]
gi|317113619|gb|ADU96109.1| (p)ppGpp synthetase I, SpoT/RelA [Thermovibrio ammonificans HB-1]
Length = 717
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/332 (32%), Positives = 170/332 (51%), Gaps = 25/332 (7%)
Query: 116 VALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKL 175
VA +LA+L+MD I AGLL VE +I+++ G A ++ +++ +
Sbjct: 52 VAYILAELRMDVPTIVAGLLHDTVEDTDTTIEEIEREFGSEVAFIVKGVTKLEG---YRF 108
Query: 176 QVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAP 234
++ A + R ++ DIR LI+ LA RL MR L+++ R QL + E + I+AP
Sbjct: 109 TSKEEADAESFRNLLISLAEDIRVLIVKLADRLHNMRTLEHMKRESQLRNAKETLTIYAP 168
Query: 235 LAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDA 294
LA+ + + ELEDLS +Y+ P +Y ++ ++ + P Y E +++ +K +
Sbjct: 169 LANRLGMYRIKNELEDLSLKYIDPEAYAEIERKVKEVKRRLLP----YLEDVIETVKREL 224
Query: 295 TLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGER 354
+ D +Q R K Y +K++ G EEV DV G+RVI +N
Sbjct: 225 ERNGIKGD--IQWRIKHIYGIYRKMVTKGIPFEEVYDVAGIRVITDTVAN---------- 272
Query: 355 ACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEM 414
CY II S+W +P R KDYIA PK N Y+SLH V V G+ +E QIRT +M
Sbjct: 273 -CYQVLGIIHSIWTPVPGRIKDYIAVPKPNMYQSLHTTV-VGPKGQ---FIEFQIRTWKM 327
Query: 415 DMLAVNGTASHAFYKGGLTNPEEAKRLKAIML 446
+A G A+H YK G +E+++ + + L
Sbjct: 328 HQVAEFGIAAHWKYKEGGGRLDESEKERFLWL 359
>gi|406838606|ref|ZP_11098200.1| GTP pyrophosphokinase [Lactobacillus vini DSM 20605]
Length = 740
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/322 (33%), Positives = 162/322 (50%), Gaps = 25/322 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD + AG L VVE V++ V + G ++ ++ +
Sbjct: 55 IQVAGILANLKMDPATVCAGFLHDVVEDTNVTLGDVGELFGHDVEVIVDGVTKLSK---I 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + ++ A RK L D+R +I+ LA RL MR L++L +Q I+ E ++I+
Sbjct: 112 RYKSHQEQLAENHRKLLLAMSKDLRVIIVKLADRLHNMRTLNHLRPDKQRRIANETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + + +ELED+S RYL P Y + + S I+ E++
Sbjct: 172 APLADRLGISTIKWELEDISLRYLNPQQYYRIVHLMNSKRAERVAYINRAIEEI------ 225
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ADL + + GR K YS +K+ + ++ D+L +RVI+ +
Sbjct: 226 KGAIADLHLNCEIYGRPKHIYSIYRKMKDQHKQFSQIYDLLAVRVIVNSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKAN Y+SLH V + GK E+QIRTE
Sbjct: 278 ---CYAVLGAIHTKWKPMPGRFKDYIAMPKANMYQSLHTTV-IGPAGKP---FEVQIRTE 330
Query: 413 EMDMLAVNGTASHAFYKGGLTN 434
EM +A G A+H YK G TN
Sbjct: 331 EMHRVAEYGVAAHWAYKEGKTN 352
>gi|387128852|ref|YP_006297457.1| GTP pyrophosphokinase , (p)ppGpp synthetase II /
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Methylophaga sp. JAM1]
gi|386275914|gb|AFI85812.1| GTP pyrophosphokinase , (p)ppGpp synthetase II /
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Methylophaga sp. JAM1]
Length = 719
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/323 (33%), Positives = 158/323 (48%), Gaps = 25/323 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LA + MD E I AGLL V+E +S + V G A L+ ++
Sbjct: 65 ITHPLAVAHVLAMMHMDYECIMAGLLHDVIEDTEMSKRDVIAEFGEPVAELVEGVTKL-- 122
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ A LRK L DIR +I+ LA RL MR L +L ++ I+ E
Sbjct: 123 -AQAAFETRQHAQAENLRKMLLAMSRDIRVIIVKLADRLHNMRTLGHLRPEKRRRIAHET 181
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A + N + ELEDL F L+P Y + +R K ++ +L
Sbjct: 182 LEIYAPIAQRLGMNLMRCELEDLGFHVLYPIRYRVLGDAVRKARGNRKEIVSQITASILN 241
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
++ + AD +QGR K+ YS KK++ EV DV R+I+
Sbjct: 242 RMEQEGLSAD------IQGREKNLYSIYKKMVSKQLSFSEVMDVYAFRIIVDDVD----- 290
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
ACY ++ +L+K + + KDYIA PKANGY+SLH + G +E+Q
Sbjct: 291 ------ACYRMLGVVHNLYKPVQGKFKDYIAIPKANGYQSLHTVL----FGPYGVPIEVQ 340
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IR+ +MD LA G A+H YK G
Sbjct: 341 IRSRDMDQLAEAGVAAHWLYKTG 363
>gi|237743935|ref|ZP_04574416.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium sp. 7_1]
gi|289765417|ref|ZP_06524795.1| hypothetical protein PSAG_01019 [Fusobacterium sp. D11]
gi|336419052|ref|ZP_08599319.1| GTP diphosphokinase [Fusobacterium sp. 11_3_2]
gi|423138132|ref|ZP_17125775.1| RelA/SpoT family protein [Fusobacterium nucleatum subsp. animalis
F0419]
gi|229432966|gb|EEO43178.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Fusobacterium sp. 7_1]
gi|289716972|gb|EFD80984.1| hypothetical protein PSAG_01019 [Fusobacterium sp. D11]
gi|336164057|gb|EGN66969.1| GTP diphosphokinase [Fusobacterium sp. 11_3_2]
gi|371958694|gb|EHO76403.1| RelA/SpoT family protein [Fusobacterium nucleatum subsp. animalis
F0419]
Length = 724
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/320 (32%), Positives = 169/320 (52%), Gaps = 33/320 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L D++MD + I AGLL VVE + I ++ G A L+
Sbjct: 50 VEVAKILMDMKMDTDTIVAGLLHDVVEDTLIPIADIKYNFGDTVATLVDGVT-------- 101
Query: 174 KLQVLDDET---AAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVM 229
KL+ L + T A +RK L +IR +++ LA RL MR L ++ +Q IS E +
Sbjct: 102 KLKALPNGTKNQAENIRKMILAMAENIRVILIKLADRLHNMRTLKFMKPEKQQSISKETL 161
Query: 230 KIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQC 289
I+APLAH + + ELED++F YL +L + + + + K I+ + +++
Sbjct: 162 DIYAPLAHRLGMAKVKSELEDIAFSYLHHDEFLEIKRLVDNTKEERKDYIENFIRTMIR- 220
Query: 290 LKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTS 349
TL++L V+GR+K YS +K+ + G+ +++ D++G+RVI++ +
Sbjct: 221 -----TLSELGIKAEVKGRFKHFYSIYRKMYQKGKDFDDIYDLMGVRVIVEDKA------ 269
Query: 350 EVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQI 409
CY I+ S + +P R KDYIA PK+N Y+S+H + V GK +EIQI
Sbjct: 270 -----TCYHVLGIVHSQYTPVPGRFKDYIAVPKSNNYQSIHTTI-VGPLGK---FIEIQI 320
Query: 410 RTEEMDMLAVNGTASHAFYK 429
RT++MD +A G A+H YK
Sbjct: 321 RTKDMDDIAEEGIAAHWNYK 340
>gi|394989576|ref|ZP_10382409.1| (p)ppGpp synthetase I SpoT/RelA [Sulfuricella denitrificans skB26]
gi|393791076|dbj|GAB72048.1| (p)ppGpp synthetase I SpoT/RelA [Sulfuricella denitrificans skB26]
Length = 729
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 168/332 (50%), Gaps = 25/332 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ L+VA +LAD +DA+ + A LL VVE ++ +++ +R G A L+ ++
Sbjct: 62 ISHPLAVAEILADWHLDAQTLMAALLHDVVEDTAITKKEIAERFGKAVAELVDGVSKLDK 121
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ Q A RK L D+R +++ +A RL MR L + ++ I+ E
Sbjct: 122 ---IEFQTEIHAQAENFRKMLLAMARDVRVILIKIADRLHNMRTLGAMAPEKRQRIANET 178
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + N + ELEDLSF +L+P + + +++ + ++ E + Q
Sbjct: 179 LEIYAPIANRLGLNSVYDELEDLSFHHLYPNRFEVLAKAVKAARGNRREVVGKVLEAIEQ 238
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
LK D + ++ GR K YS KK+ EV D+ G RVI+K
Sbjct: 239 KLK------DCQIEATITGREKHLYSIYKKMQGKSLTFSEVFDIYGFRVIVKDVPT---- 288
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY T + L+K +P + KDYIA PKANGY+SLH + G +EIQ
Sbjct: 289 -------CYLTLGSLHQLYKPIPGKFKDYIAIPKANGYQSLHTTL----FGPFGTPIEIQ 337
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAKR 440
IR+++M +A G ASH YK G T E ++
Sbjct: 338 IRSQDMHKIAEAGVASHWLYKSGDTEINEMQQ 369
>gi|414167177|ref|ZP_11423406.1| RelA/SpoT family protein [Afipia clevelandensis ATCC 49720]
gi|410890994|gb|EKS38792.1| RelA/SpoT family protein [Afipia clevelandensis ATCC 49720]
Length = 759
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 122/401 (30%), Positives = 197/401 (49%), Gaps = 27/401 (6%)
Query: 39 ESSSSSFASSP-APLPSTAGEKMVVKLVGAFNELTERMNVLSSSSSRLLFKALKLSIPML 97
++++ + A+ P AP TA + + K++ ++ L +R+ + ++ L + M
Sbjct: 12 QAATEAVAAVPSAPSEVTAKKPVRTKMMRQYD-LVDRVRAYNPNTDEDLLNRAYVYAMMA 70
Query: 98 QSLPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGT 157
+ L VA +L +L++D I A LL +E + ++ G
Sbjct: 71 HGEQKRASGDPYFSHPLEVAAILTNLKLDDATIVAALLHDTIEDTESTRAEIDQIFGPEI 130
Query: 158 AHLLHESLRVKNNVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYL 216
L+ ++K L+L + + A LRK L D +R L++ LA RL MR ++++
Sbjct: 131 GALVEGLTKLKR---LELVSREAKQAENLRKLLLAISDDVRVLLVKLADRLHNMRTMEFM 187
Query: 217 PRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSK 276
P + I+ E + I+APLA + + ELEDLSFR + P ++ V L + E K
Sbjct: 188 PPASRRRIAEETLDIYAPLAGRMGMQEMREELEDLSFRIIDPDAHAVVVQRLDALEARDK 247
Query: 277 PLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLR 336
LI + QL A LA + V+GR K +S K+ + E+++D+ G R
Sbjct: 248 NLIGEIESQL------SAKLAKNGVNAHVKGRRKQPFSIWMKMERKSVGFEQLSDIFGFR 301
Query: 337 VIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVS 396
+I+ + +EV Y T I+ + W +P R KDYI+ PK N YRS+H V
Sbjct: 302 IIVN------SIAEV-----YRTVGIVHTTWPVVPGRFKDYISTPKQNDYRSIHTT--VI 348
Query: 397 DNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
GK R +E+QIRTEEMD + G A+HAFYK G+ +P E
Sbjct: 349 GPGKQR--VELQIRTEEMDRVNEYGIAAHAFYKDGVGSPNE 387
>gi|338974861|ref|ZP_08630217.1| GTP pyrophosphokinase/ Guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Bradyrhizobiaceae bacterium
SG-6C]
gi|338231956|gb|EGP07090.1| GTP pyrophosphokinase/ Guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Bradyrhizobiaceae bacterium
SG-6C]
Length = 749
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 122/401 (30%), Positives = 197/401 (49%), Gaps = 27/401 (6%)
Query: 39 ESSSSSFASSP-APLPSTAGEKMVVKLVGAFNELTERMNVLSSSSSRLLFKALKLSIPML 97
++++ + A+ P AP TA + + K++ ++ L +R+ + ++ L + M
Sbjct: 2 QAATEAVAAVPSAPSEVTAKKPVRTKMMRQYD-LVDRVRAYNPNTDEDLLNRAYVYAMMA 60
Query: 98 QSLPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGT 157
+ L VA +L +L++D I A LL +E + ++ G
Sbjct: 61 HGEQKRASGDPYFSHPLEVAAILTNLKLDDATIVAALLHDTIEDTESTRAEIDQIFGPEI 120
Query: 158 AHLLHESLRVKNNVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYL 216
L+ ++K L+L + + A LRK L D +R L++ LA RL MR ++++
Sbjct: 121 GALVEGLTKLKR---LELVSREAKQAENLRKLLLAISDDVRVLLVKLADRLHNMRTMEFM 177
Query: 217 PRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSK 276
P + I+ E + I+APLA + + ELEDLSFR + P ++ V L + E K
Sbjct: 178 PPASRRRIAEETLDIYAPLAGRMGMQEMREELEDLSFRIIDPDAHAVVVQRLDALEARDK 237
Query: 277 PLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLR 336
LI + QL A LA + V+GR K +S K+ + E+++D+ G R
Sbjct: 238 NLIGEIESQL------SAKLAKNGVNAHVKGRRKQPFSIWMKMERKSVGFEQLSDIFGFR 291
Query: 337 VIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVS 396
+I+ + +EV Y T I+ + W +P R KDYI+ PK N YRS+H V
Sbjct: 292 IIVN------SIAEV-----YRTVGIVHTTWPVVPGRFKDYISTPKQNDYRSIHTT--VI 338
Query: 397 DNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
GK R +E+QIRTEEMD + G A+HAFYK G+ +P E
Sbjct: 339 GPGKQR--VELQIRTEEMDRVNEYGIAAHAFYKDGVGSPNE 377
>gi|167756850|ref|ZP_02428977.1| hypothetical protein CLORAM_02399 [Clostridium ramosum DSM 1402]
gi|237734560|ref|ZP_04565041.1| GTP pyrophosphokinase [Mollicutes bacterium D7]
gi|365832567|ref|ZP_09374100.1| RelA/SpoT family protein [Coprobacillus sp. 3_3_56FAA]
gi|374625687|ref|ZP_09698103.1| RelA/SpoT family protein [Coprobacillus sp. 8_2_54BFAA]
gi|167703025|gb|EDS17604.1| RelA/SpoT family protein [Clostridium ramosum DSM 1402]
gi|229382380|gb|EEO32471.1| GTP pyrophosphokinase [Coprobacillus sp. D7]
gi|365260512|gb|EHM90469.1| RelA/SpoT family protein [Coprobacillus sp. 3_3_56FAA]
gi|373915347|gb|EHQ47118.1| RelA/SpoT family protein [Coprobacillus sp. 8_2_54BFAA]
Length = 741
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/321 (33%), Positives = 165/321 (51%), Gaps = 33/321 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA LQ I+AGLL V+E GVS +++ +R G L+ ++ +
Sbjct: 60 IWVAYILATLQTGPATIAAGLLHDVMEDCGVSREEMVERFGEEITTLVEGVTKIGK---M 116
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ D A RK + DIR +++ A RL MR L ++P ++Q IS E ++++
Sbjct: 117 PFKDESDVYAENHRKIYIAMAKDIRVILIKFADRLHNMRTLQFMPPHKQKRISRETLEVY 176
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
P+AH + N + ELEDLS YL P +Y + L + + +E+ K
Sbjct: 177 TPIAHRLGINDIKTELEDLSLSYLDPVAYSEISKLLATKQ----------EERKESVAKM 226
Query: 293 DATLADLVEDVSVQ----GRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
A++ +++D S Q GR KS YS KK+ + +E+ D+ LR+I + +
Sbjct: 227 MASVKQILDDNSYQYRILGRAKSIYSIYKKMFVKKKRFDELYDLYALRIITQDKMD---- 282
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY +I ++ +P R KDYIA PK N Y+SLH +V + ++G T EIQ
Sbjct: 283 -------CYGILGLIHDQYRPIPGRFKDYIAMPKPNMYQSLHTSV-IGEDGNT---FEIQ 331
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRTEEMD LA G A+H YK
Sbjct: 332 IRTEEMDELAELGVAAHWRYK 352
>gi|429330287|ref|ZP_19211081.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pseudomonas putida CSV86]
gi|428765003|gb|EKX87124.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pseudomonas putida CSV86]
Length = 702
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 161/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + + + G A L+ V
Sbjct: 46 VTHPLAVASILADMHMDHQSLMAAMLHDVIEDTGIAKEALSSQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ ++P + ++ K +++ +E L
Sbjct: 163 LEIYAPIANRLGMHSVRIEFEDLGFKAMYPMRSARIYQAVKRARGNRKEIVNKIEESLSH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D + V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAVDGIEGE------VSGRQKHIYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|168052096|ref|XP_001778487.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670085|gb|EDQ56660.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 546
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 165/329 (50%), Gaps = 37/329 (11%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHL------LHE 163
L + AL+LA + V++AGLL ++ +S++ +R +G A L L E
Sbjct: 56 LAHCVETALILAATGVGNIVVAAGLLHDAIDDSNLSLELLRCSLGENVASLVIGVSKLSE 115
Query: 164 SLRVKNNVNLKLQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLM 223
++ + N V D A LR L D+R +++ +A RL +R L+ LP ++Q+
Sbjct: 116 FSQLARDCN---TVCDTLEADRLRTMILAMVDVRVVLIKIADRLHNLRTLEALPSHKQIG 172
Query: 224 ISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYK 283
I+ E ++I APLA+ + E+EDL F+ L P HE S L + +
Sbjct: 173 IAKETLEIFAPLANRLGIWSWKAEMEDLCFKCLKPV----------DHENLSIRLSERCR 222
Query: 284 EQLLQCLKTD---ATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIK 340
E L+ D A V+ + + GR K+ YS KK++K R P+E+ DV GLR+I+
Sbjct: 223 EGLVMSSIRDLDEALRVGGVQFIDLCGRPKNLYSVYKKMMKKKRSPDEILDVRGLRLIV- 281
Query: 341 PSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGK 400
E +CY E++ LW+ +P +TKDYI K NGY+SLH V SD
Sbjct: 282 ----------TDEESCYQALEVVHQLWRCIPGKTKDYIVDSKPNGYKSLHTVVIGSDG-- 329
Query: 401 TRPLMEIQIRTEEMDMLAVNGTASHAFYK 429
PL E+QIRT +M A G A+H YK
Sbjct: 330 -YPL-EVQIRTMKMHHQAEYGLAAHWRYK 356
>gi|383781444|ref|YP_005466011.1| putative ppGpp synthetase [Actinoplanes missouriensis 431]
gi|381374677|dbj|BAL91495.1| putative ppGpp synthetase [Actinoplanes missouriensis 431]
Length = 830
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 167/321 (52%), Gaps = 27/321 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LA+L MD + A LL +E ++Q+R+ G A L+ ++
Sbjct: 149 ITHPLAVATILANLGMDTTTLVAALLHDTIEDTDYGLEQMRNDFGAEVALLVDGVTKLD- 207
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++++ D A +RK + D R L++ LA RL MR L +LPR +Q + E
Sbjct: 208 ----RVKLGDAAKAETIRKMVVAMAKDPRVLVIKLADRLHNMRTLTFLPRAKQEQKAKET 263
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I APLAH + N + +ELEDL+F LFP + ++ + H+ + L+ Q+
Sbjct: 264 LEILAPLAHRLGMNTIKWELEDLAFGTLFPKRFEEINRLIGEHQPQREALL----RQVTN 319
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ D A + + + GR K YS +K++ GR ++ D++G+R+ LV+T
Sbjct: 320 RVSLDLKSAKIKAETT--GRPKHLYSIYQKMIVRGRDFNDIYDLVGVRI-------LVDT 370
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY +I + W+ +P R KDYIA PK N Y+SLH V + GK +E+Q
Sbjct: 371 V----RDCYAALGVIHANWQPVPGRFKDYIAMPKFNMYQSLHTTV-IGPTGKP---VEMQ 422
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT M A G A+H YK
Sbjct: 423 IRTFAMHRTAEFGIAAHWKYK 443
>gi|374853909|dbj|BAL56805.1| GTP pyrophosphokinase [uncultured prokaryote]
Length = 732
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 177/369 (47%), Gaps = 31/369 (8%)
Query: 68 FNELTERMNVLSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMDA 127
F+++ E++ + + L + + M + L L VA +LAD+++D
Sbjct: 8 FDDILEQVQAYNPTCDEDLLRRAYVFSAMAHQGQVRASGEPYLVHPLEVARILADMRLDE 67
Query: 128 EVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAALR 187
I+ GLL ++E V+ + +RD+ G +L+ ++L + A + R
Sbjct: 68 VAIAVGLLHDLLEDTYVTEETLRDQFGDRITNLV-KALTKITTLEKSYAARQAAQAESFR 126
Query: 188 KFCL-TYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSF 246
+ L + DIR L++ LA RL MR L++L ++ I+ E ++I+APLAH + +
Sbjct: 127 RMLLASIEDIRVLLVKLADRLHNMRTLNFLDEPKRQRIAQETLEIYAPLAHRLGIGRIKA 186
Query: 247 ELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQ 306
ELEDL+F LFP + L + + I++ + +L LK D S++
Sbjct: 187 ELEDLAFWNLFPEEAESLSRQLAAKREKASAAIELVRAELEHMLK----------DCSIE 236
Query: 307 G----RYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREI 362
G R K YS +KL G +++ D L RV++ +N CY +
Sbjct: 237 GEVRFRIKHLYSIWRKLAVQGISLDQLYDFLAFRVVVDSVAN-----------CYAVFGL 285
Query: 363 IQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGT 422
+ WK +P R KDYIA PK+NGY+SLH V G E+QIRT +MD +A G
Sbjct: 286 VHQRWKPIPGRLKDYIAVPKSNGYQSLHTTV----LGPEGLPFEVQIRTRDMDEVAEKGV 341
Query: 423 ASHAFYKGG 431
A+H YK G
Sbjct: 342 AAHWLYKEG 350
>gi|304440364|ref|ZP_07400253.1| GTP diphosphokinase [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371116|gb|EFM24733.1| GTP diphosphokinase [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 713
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 110/321 (34%), Positives = 171/321 (53%), Gaps = 25/321 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+VAL+LAD+ MD I AGLL VVE V+ + +++ G A L+ ++K L
Sbjct: 48 FNVALILADMNMDTPTIVAGLLHDVVEDTDVTYEDIKEEFGQEIADLVDGVTKLKK---L 104
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + A +RK L DIR +I+ LA R MR L+Y+ +++ + E ++I+
Sbjct: 105 NYKTKKENQAENIRKMVLAMAKDIRVIIVKLADRTHNMRTLEYMTPEKKIEKANETIEIY 164
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+A + + + +ELEDLS RYL P +Y + + + LI ++L+ +K
Sbjct: 165 APIADRLGMSKVKWELEDLSLRYLDPDNYYKLVDMVNKRRNEREDLI----KKLIDEIKA 220
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ A + D + GR K+ YS KK++ + +E+ D+ +RV LV+T
Sbjct: 221 EVEKAGIKAD--IHGRPKNFYSIYKKMIIKKKSFDEIYDLQAVRV-------LVDTV--- 268
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY + +L+K +P R KDYIA PK+N Y+SLH V + NG+T E+QIRT
Sbjct: 269 -KDCYGVLGAVHNLYKPIPGRFKDYIAMPKSNNYQSLHTTV-IDSNGET---FEVQIRTY 323
Query: 413 EMDMLAVNGTASHAFYKGGLT 433
EM A G A+H YK G T
Sbjct: 324 EMHQTAEYGIAAHWKYKSGAT 344
>gi|330812601|ref|YP_004357063.1| (p)ppGpp synthetase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|378953653|ref|YP_005211141.1| protein SpoT [Pseudomonas fluorescens F113]
gi|423700092|ref|ZP_17674582.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [Pseudomonas
fluorescens Q8r1-96]
gi|327380709|gb|AEA72059.1| (p)ppGpp synthetase, guanosine-3,5-bis(diphosphate)
3-pyrophosphohydrolase [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|359763667|gb|AEV65746.1| SpoT [Pseudomonas fluorescens F113]
gi|387996302|gb|EIK57632.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [Pseudomonas
fluorescens Q8r1-96]
Length = 701
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 162/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + ++ + G A L+ V
Sbjct: 46 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALQAQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ + P ++ ++ K +++ +E L
Sbjct: 163 LEIYAPIANRLGMHAIRIEFEDLGFKAMHPMRSARINQAVKRARGNRKEIVNKIEESLSH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D + V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAIDGIEGE------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|336400155|ref|ZP_08580943.1| hypothetical protein HMPREF0404_00234 [Fusobacterium sp. 21_1A]
gi|336163352|gb|EGN66284.1| hypothetical protein HMPREF0404_00234 [Fusobacterium sp. 21_1A]
Length = 574
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/320 (33%), Positives = 171/320 (53%), Gaps = 33/320 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L D++MD + I AGLL VVE + I ++ G A L+ + V
Sbjct: 50 VEVAKILMDMKMDTDTIVAGLLHDVVEDTLIPIADIKYNFGDTVATLV-------DGVT- 101
Query: 174 KLQVLDDET---AAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVM 229
KL+ L + T A +RK L +IR +++ LA RL MR L ++ +Q IS E +
Sbjct: 102 KLKALPNGTKNQAENIRKMILAMAENIRVILIKLADRLHNMRTLKFMKPEKQQSISKETL 161
Query: 230 KIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQC 289
I+APLAH + + ELED++F YL +L + + + + K I+ + +++
Sbjct: 162 DIYAPLAHRLGMAKVKSELEDIAFSYLHHDEFLEIKRLVDNTKEERKDYIENFIRTMIR- 220
Query: 290 LKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTS 349
TL++L V+GR+K YS +K+ + G+ +++ D++G+RVI++ +
Sbjct: 221 -----TLSELGIKAEVKGRFKHFYSIYRKMYQKGKEFDDIYDLMGVRVIVEDKA------ 269
Query: 350 EVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQI 409
CY I+ S + +P R KDYIA PK+N Y+S+H + V GK +EIQI
Sbjct: 270 -----TCYHVLGIVHSQYTPVPGRFKDYIAVPKSNNYQSIHTTI-VGPLGK---FIEIQI 320
Query: 410 RTEEMDMLAVNGTASHAFYK 429
RT++MD +A G A+H YK
Sbjct: 321 RTKDMDDIAEEGIAAHWNYK 340
>gi|417001114|ref|ZP_11941028.1| GTP diphosphokinase [Veillonella parvula ACS-068-V-Sch12]
gi|333975597|gb|EGL76476.1| GTP diphosphokinase [Veillonella parvula ACS-068-V-Sch12]
Length = 746
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 162/325 (49%), Gaps = 25/325 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA +LA LQ+D + A L+ VVE S + + + G A L+ ++
Sbjct: 69 LAVADILAHLQIDHITLMAALMHDVVEDTSYSKEDLEEMFGSEVAFLVDGVTKLNQ---F 125
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +D RK L D+R +++ L RL MR L ++ +Q I+ E ++I
Sbjct: 126 QYETKEDRQMENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKHMRSDKQKRIAKETLEIF 185
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + +ELEDLSFRYL P Y + ++ + +++ QL + L
Sbjct: 186 APLAHRLGIFNVKWELEDLSFRYLEPEKYYDLVDQMKQKRQVREDIVNDTMSQLTKALSE 245
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
AD ++GR K YS KK+ KD R ++ D+L +RVI+ +
Sbjct: 246 AHIKAD------IKGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDSIPD-------- 291
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I SLWK +P+R KDYI+ PK+N Y+SLH V G +EIQIRT
Sbjct: 292 ---CYAVLGIAHSLWKPLPYRFKDYISMPKSNMYQSLHTTV----IGTMGQPVEIQIRTW 344
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEE 437
EM ++ G A+H YK G N ++
Sbjct: 345 EMHRVSEYGVAAHWRYKEGNKNGDK 369
>gi|6136306|gb|AAF04327.1| RelA/SpoT homolog [Bradyrhizobium japonicum]
Length = 779
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 120/380 (31%), Positives = 181/380 (47%), Gaps = 29/380 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ L VA +L DL++D I A LL +E + ++ G L+ ++K
Sbjct: 96 FSHPLEVAAILTDLKLDDATIVAALLHDTIEDTEATRAEIDQIFGPEICALVEGLTKLKR 155
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+L + + A LRK L D +R L++ LA RL MR L+++P + I+ E
Sbjct: 156 ---LELVSREAKQAENLRKLLLAIADDVRVLLVKLADRLHNMRTLEFVPPESRRRIAEET 212
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+APLA + + ELEDLSFR L P +Y V L + ++ LI + QL
Sbjct: 213 LDIYAPLAGRMGMQEMREELEDLSFRTLDPEAYSVVMQRLDALAERNRNLIGEIEAQLSN 272
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L+ A V GR K +S K+ + E+++D+ G RV+ VN
Sbjct: 273 NLRHRGLGA------RVYGRRKKPFSIWTKMERKSVGFEQLSDIFGFRVV-------VND 319
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
E ACY I+ + W +P R KDYI+ PK N YRS+H V N + E+Q
Sbjct: 320 IE----ACYRALGIVHTTWPVVPGRFKDYISTPKQNDYRSIHTTVIGPGNQRA----ELQ 371
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPST-NHKGF 467
IRTE MD +A G A+H FYK G +P E + ++ A L ++P+ N +
Sbjct: 372 IRTEAMDQIAERGIAAHVFYKEGAGSPTEFLKRESNAFAWLRHTVGILSEMPTPRNSRAH 431
Query: 468 EFD---WRDRVFRLLDKNGD 484
+ + + D+VF K D
Sbjct: 432 KLEVELFHDQVFCFTPKQAD 451
>gi|326803463|ref|YP_004321281.1| GTP diphosphokinase [Aerococcus urinae ACS-120-V-Col10a]
gi|326651531|gb|AEA01714.1| GTP diphosphokinase [Aerococcus urinae ACS-120-V-Col10a]
Length = 748
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 172/327 (52%), Gaps = 24/327 (7%)
Query: 116 VALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKL 175
VA +LADLQMD + ++ G L VVE G+++ + A L+ ++ +K
Sbjct: 57 VAGILADLQMDPDTVATGFLHDVVEDTGITLDDIEYFFSKTIATLVDGVTKLGK---VKY 113
Query: 176 QVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAP 234
+ +++ A +K L D+R +++ LA RL MR L + +Q+ IS E + I+AP
Sbjct: 114 RSKEEQLAENHQKLLLAMANDLRVIVVKLADRLHNMRTLKWHRPEKQVSISEETLDIYAP 173
Query: 235 LAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDA 294
LA + + + +ELED RY+ P +Y + + S + ID + L + +K
Sbjct: 174 LADRLGMSQIKWELEDTCLRYINPEAYYQIVHLMNSKREEREAYIDATIDVLNKYVKP-- 231
Query: 295 TLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGER 354
+ D D+ GR K YS KK+ + + +E+ D+L +RV++ PS +
Sbjct: 232 -IIDGEYDIY--GRPKHIYSIYKKMHQQKKTFDEIYDLLAIRVLV-PSV----------K 277
Query: 355 ACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEM 414
CY I+ + WK +P R KDYIA PKANGY+SLH V + ++G+ +EIQIRT +M
Sbjct: 278 DCYAVLGIVHTSWKPLPGRFKDYIAMPKANGYQSLHTTV-LGEHGQP---VEIQIRTFDM 333
Query: 415 DMLAVNGTASHAFYKGGLTNPEEAKRL 441
+A G A+H YK G+T+ E L
Sbjct: 334 HEVAEYGVAAHWAYKKGVTDKVETDDL 360
>gi|257066403|ref|YP_003152659.1| (p)ppGpp synthetase I SpoT/RelA [Anaerococcus prevotii DSM 20548]
gi|256798283|gb|ACV28938.1| (p)ppGpp synthetase I, SpoT/RelA [Anaerococcus prevotii DSM 20548]
Length = 726
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 166/321 (51%), Gaps = 33/321 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
++VA L+D+++D E I AGL+ V+E V+ +++ + G L+ ++KN L
Sbjct: 55 IAVARKLSDMKLDDETICAGLMHDVLEDTPVTREEMAEEFGEEITFLVDGVTKLKN---L 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+++ A +RK + D+R +++ L+ RL MR L+Y+ R +Q+ I+ E ++I+
Sbjct: 112 NYTSREEKQADNIRKMVMAMSNDVRVVLIKLSDRLHNMRTLEYMTRKKQIQIADETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYL----FVDTWLRSHETGSKPLIDIYKEQLLQ 288
PLAH + L +ELEDL FRY P Y V+ R E +I+ L
Sbjct: 172 VPLAHRLGIYSLKWELEDLCFRYQEPEKYYELAEMVNVKRREREAYINEIINT----LTN 227
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
LK + + + GR KS YS KK+ ++G +E+ D+ +RVI+ +
Sbjct: 228 SLKGTSI------NFEISGRPKSLYSINKKMERNGIAFDEIYDLTAIRVIVDTIA----- 276
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + SLW+ +P+R KDY+ +PK NGYRSLH V D ++P E+Q
Sbjct: 277 ------ECYAVLGKVHSLWRPIPNRIKDYVGQPKPNGYRSLHTTVFGED---SKPF-EVQ 326
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT +M G A+H YK
Sbjct: 327 IRTRQMHKECEYGVAAHWRYK 347
>gi|451947689|ref|YP_007468284.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfocapsa sulfexigens DSM
10523]
gi|451907037|gb|AGF78631.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfocapsa sulfexigens DSM
10523]
Length = 731
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/329 (34%), Positives = 167/329 (50%), Gaps = 37/329 (11%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L L VA LA + +D + I AGLL V++ G V + ++R + G A ++ R+ N
Sbjct: 55 LDHTLHVASTLASMHLDLDTIVAGLLHGVLKEG-VELDELRKQFGENVAIIVDGCTRITN 113
Query: 170 -NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLE 227
+ N KL A +RK L D+R L++ LA RL M LD +P +Q I+ E
Sbjct: 114 VHYNSKLT----HQADNVRKMLLAIATDVRVLLVKLADRLQDMCLLDTVPLERQQEIARE 169
Query: 228 VMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRS----HETGSKPLIDIYK 283
++APLA + +++ ELEDL+F+YL P YL + T L S + +I I+
Sbjct: 170 TKDLYAPLASRLGIDWMKRELEDLAFQYLHPSEYLDLVTNLESSLEERQRYVDEVISIFH 229
Query: 284 EQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIP-EEVNDVLGLRVIIKPS 342
E+L A +E + GR K YS KKL+ +IP E V D + R+I+
Sbjct: 230 EKL---------AASNIEPTRIIGRPKHLYSIYKKLVAQ-KIPLERVYDKVAFRIIVDSI 279
Query: 343 SNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTR 402
+ CY +I + W +P R KD+I+ PK+N Y+S+H V G
Sbjct: 280 KD-----------CYEALGVIHANWSPVPGRIKDFISVPKSNNYQSMHTTV----IGPRD 324
Query: 403 PLMEIQIRTEEMDMLAVNGTASHAFYKGG 431
+EIQIRTEEMD +A+ G A+H YK G
Sbjct: 325 HFIEIQIRTEEMDRIAMEGVAAHWAYKEG 353
>gi|407801695|ref|ZP_11148538.1| GTP pyrophosphokinase [Alcanivorax sp. W11-5]
gi|407024012|gb|EKE35756.1| GTP pyrophosphokinase [Alcanivorax sp. W11-5]
Length = 705
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 165/322 (51%), Gaps = 25/322 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +L D+ MD + + A +L V+E GV+ +Q+ + A L+ ++
Sbjct: 46 ITHPLAVANILTDMHMDHQSLMAAMLHDVIEDTGVTKEQLAELFSPDVAELVDGVSKI-- 103
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+K + ++ A LRK L DIR +++ LA RL MR L +P ++ I+ E
Sbjct: 104 -AQIKFESKAEQQAENLRKMMLAMTRDIRVILVKLADRLHNMRTLHSMPSEKRKRIATET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + E EDL F ++P + +++ K ++ K +
Sbjct: 163 LEIYAPIANRLGMYNMRVEYEDLGFNAIYPMRANLISKAVKAARGHRKEILSTLKASIEH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL+ + A ++ GR K YS K+ + + E+ DV G R+I+ + V+T
Sbjct: 223 CLEEEGIPARIL------GREKHLYSIYMKMKEQHKPLNEIMDVYGFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + + + +P R KDYIA PKANGY+SLH + ++ +EIQ
Sbjct: 273 -------CYRVLGAVHNYFTPIPGRFKDYIAIPKANGYQSLHTTL----KARSGIPLEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYKG 430
IRTEEM+ +A NG A+H YK
Sbjct: 322 IRTEEMEAMANNGIAAHWLYKA 343
>gi|254482710|ref|ZP_05095948.1| RelA/SpoT family protein [marine gamma proteobacterium HTCC2148]
gi|214037069|gb|EEB77738.1| RelA/SpoT family protein [marine gamma proteobacterium HTCC2148]
Length = 706
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/321 (32%), Positives = 161/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LA++ MD + + A +L V+E G+ + ++ G A L+ V
Sbjct: 49 VTHPLAVAGILAEMHMDHQSLIAAMLHDVIEDTGIPKSAIGEQFGAPVAELVDG---VSK 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ L+++ A +K L DIR +++ LA RL MR L L + IS E
Sbjct: 106 LTQMEFGSLEEKQAENFQKMALAMARDIRVILVKLADRLHNMRTLGVLQTSKARRISRET 165
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A + N + E EDL F + P ++ LR+ K L+D ++Q+
Sbjct: 166 LEIYAPIAMRLGMNNIRMEFEDLGFSAMHPMRARRIEAALRNARGHRKELVDKIRQQI-- 223
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ATL V GR K YS KK+ + E+ D+ R+I+ + V+T
Sbjct: 224 ----EATLNQEGHPAEVMGREKHLYSIYKKMKSKRKSFSEIMDIYAFRIIV----DSVDT 275
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + SL+K +P KDYIA PKANGY+SLH + G +EIQ
Sbjct: 276 -------CYRVLGCVHSLYKPVPGEFKDYIAIPKANGYQSLHTVL----MGMHGVPIEIQ 324
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 325 IRTREMEDMANNGIAAHWLYK 345
>gi|399521243|ref|ZP_10761983.1| GTP pyrophosphokinase [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399110481|emb|CCH38542.1| GTP pyrophosphokinase [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 747
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 163/329 (49%), Gaps = 27/329 (8%)
Query: 108 SPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLR- 166
S L +A +LADL++D + + A ++ + V G +++ V+ R G A L+ LR
Sbjct: 63 STFRAGLDIAEILADLKLDQDSLVAAVIYRGVREGKITLAAVQQRFGAVVAKLIEGVLRM 122
Query: 167 --VKNNVNLKLQVL--DDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQ 221
+ ++N + V+ LRK + D +R ++ LA R +R + ++
Sbjct: 123 AAISASINPRESVVVGSQTQVENLRKMLVAMVDDVRVALIKLAERTCAIRAVKEADEDKR 182
Query: 222 LMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDI 281
++ EV I+APLAH + ++ +ELEDLSFRYL P Y + L + I+
Sbjct: 183 QRVAREVFDIYAPLAHRLGIGHIKWELEDLSFRYLEPDQYKQIAKLLHERRLDREQYIND 242
Query: 282 YKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKP 341
L Q L+ AD + GR K YS +K+ + G ++ DV LRV++
Sbjct: 243 AMANLRQELEATGIKAD------ISGRAKHIYSIWRKMQRKGLQFSQIYDVRALRVLV-- 294
Query: 342 SSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKT 401
EV R CYTT I+ +LW+ +P DYIA PK NGYRSLH AV + GK
Sbjct: 295 -------PEV--RDCYTTLGIVHTLWRHIPKEFDDYIANPKENGYRSLHTAV-LGPEGK- 343
Query: 402 RPLMEIQIRTEEMDMLAVNGTASHAFYKG 430
++E+QIRT M A G +H YKG
Sbjct: 344 --VLEVQIRTHAMHEEAELGVCAHWRYKG 370
>gi|88856261|ref|ZP_01130921.1| GTP pyrophosphokinase [marine actinobacterium PHSC20C1]
gi|88814580|gb|EAR24442.1| GTP pyrophosphokinase [marine actinobacterium PHSC20C1]
Length = 748
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 165/321 (51%), Gaps = 27/321 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++V+ +LADL + + I+A LL VE S+ ++R G A L+ ++
Sbjct: 70 ITHPVAVSQILADLGIGEKTIAAALLHDTVEDTEYSLDELRVEFGDEIAMLVDGVTKLD- 128
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
K++ D A +RK + DIR L++ LA RL R ++PR L + E
Sbjct: 129 ----KVKYGDSAQAETVRKMIVAMSKDIRVLVIKLADRLHNARTWGFVPRESALRKAQET 184
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+APLAH + + ELEDLSF L P Y+ +++ + T P D + +Q++
Sbjct: 185 LEIYAPLAHRLGIQAIKIELEDLSFAVLHPKIYVEIESLV----TKRTPQRDEFVKQVIA 240
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ D + + SV GR K YS +K++ GR +E+ D++G+RV LVN+
Sbjct: 241 SVNDDLKTSRI--KGSVAGRPKQYYSIYQKMIVRGREFDEIYDLVGIRV-------LVNS 291
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY I + W +P R KDYIA PK N Y+SLH V + G+ +EIQ
Sbjct: 292 V----RDCYAVLGSIHARWNPIPGRFKDYIATPKFNLYQSLHTTV-IGPQGRA---VEIQ 343
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM A G A+H YK
Sbjct: 344 IRTSEMHHRAEFGVAAHWKYK 364
>gi|344171885|emb|CCA84509.1| putative bifunctional: (p)ppGpp synthetase II; guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase; precursor (spoT)
[Ralstonia syzygii R24]
Length = 810
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 191/395 (48%), Gaps = 32/395 (8%)
Query: 48 SPAPLPSTAGEKMVVKLVGAFNELTERMNVLSSSSSRLLFKALKLSIPMLQSLPLSPDSR 107
P P+ + VV + G LTE+++ L + +L+ +A S L S
Sbjct: 78 GPTSQPAAPPRQQVVSIAG----LTEKLSYLKPADMKLVKEAFHFSDEA--HLGQYRQSG 131
Query: 108 SP-LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLR 166
P +T ++VA + A ++D + I A LL V+E GV+ ++ ++ G A L+ +
Sbjct: 132 EPYITHPVAVAEICAGWKLDVQSIMAALLHDVIEDQGVTKSELAEKFGPKVAELVDGLTK 191
Query: 167 VKNNVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMIS 225
+ L+ Q + A + RK L D+R +++ LA R MR LD++P ++ I+
Sbjct: 192 LDK---LEFQSREQAQAESFRKMLLAMARDVRVILVKLADRTHNMRTLDHVPPEKRRRIA 248
Query: 226 LEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQ 285
E M+I+AP+AH + N EL++LSFR F Y ++ +++ + ++ E
Sbjct: 249 GETMEIYAPIAHRLGLNTTYRELQELSFRIGSSFRYATLEKAVKAARGNRREVVSRILEA 308
Query: 286 LLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNL 345
+ L A+L GR K+ YS +K+ +V DV G RV+++
Sbjct: 309 AQRALGDAGIPAELT------GREKTLYSIYRKMHDKQLSFSQVLDVYGFRVVVET---- 358
Query: 346 VNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLM 405
+ CY + SL+K MP + KDYIA PK NGY+SLH + V G +
Sbjct: 359 -------QMQCYMAVGALHSLYKPMPGKFKDYIAIPKINGYQSLHTTL-VGPFGTP---V 407
Query: 406 EIQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKR 440
E QIRT EM+ +A G A+H YK P+ A++
Sbjct: 408 EFQIRTREMNQIAEAGVAAHWMYKQHHDEPDRAQQ 442
>gi|456354826|dbj|BAM89271.1| GTP pyrophosphokinase [Agromonas oligotrophica S58]
Length = 767
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/329 (33%), Positives = 163/329 (49%), Gaps = 25/329 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
T L VA +L DL++D I A LL +E + ++ G L+ ++K
Sbjct: 83 FTHPLEVAAILTDLKLDDATIVAALLHDTIEDTEATRAEIDRFFGPEIGALVEGLTKLKR 142
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+L + + A LRK L D +R L++ LA RL MR L+++P + I+ E
Sbjct: 143 ---LELVSREAKQAENLRKLLLAIADDVRVLLVKLADRLHNMRTLEFVPEASRRRIAEET 199
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+APLA + + ELEDLSFR L P +Y V L + ++ LI + QL +
Sbjct: 200 LDIYAPLAGRMGMQEMREELEDLSFRTLDPQAYSVVMQRLDALADRNRNLIGEIESQLAR 259
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ A V GR K +S K+ + E+++D+ G RVI+
Sbjct: 260 KFRDHGLTA------RVFGRRKRPFSIWTKMERKSIGFEQLSDIFGFRVIMPDLE----- 308
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
+CY I+ + W +P R KDYI+ PK N YRS+H V GK R +E+Q
Sbjct: 309 ------SCYRALGIVHTTWPVVPGRFKDYISTPKQNDYRSIHTT--VIGPGKQR--VELQ 358
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
IRTEEMD +A G A+HAFYK + +P E
Sbjct: 359 IRTEEMDQIAELGIAAHAFYKDDIGSPTE 387
>gi|417927861|ref|ZP_12571249.1| RelA/SpoT family protein [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|340765735|gb|EGR88261.1| RelA/SpoT family protein [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
Length = 739
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 173/347 (49%), Gaps = 26/347 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +LADL +DA ++ G L VVE +++ + G ++ ++
Sbjct: 51 IVHPIQVAGILADLHLDAVTVACGFLHDVVEDTDITLDNIEFDFGKDVRDIVDGVTKLGK 110
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E
Sbjct: 111 ---VEYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRET 167
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLAH + + + +ELEDL+FRYL + + + + L+D ++
Sbjct: 168 MEIYAPLAHRLGISRIKWELEDLAFRYLNETEFYKISHMMNEKRREREALVD----DIVT 223
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+K+ T L D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 224 KIKSYTTEQGLFGD--VYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCVMETQSDV--- 278
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQ
Sbjct: 279 --------YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQ 325
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALR 455
IRT+EM +A G A+H YK G+ K M EL L+
Sbjct: 326 IRTKEMHQVAEYGVAAHWAYKKGVRGKVNQAEQKVGMNWIKELVELQ 372
>gi|334880385|emb|CCB81113.1| GTP pyrophosphokinase [Lactobacillus pentosus MP-10]
gi|339639012|emb|CCC18220.1| GTP pyrophosphokinase [Lactobacillus pentosus IG1]
Length = 755
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 166/320 (51%), Gaps = 26/320 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD E +++G L VVE GV++ V + G A ++ ++ +
Sbjct: 55 IQVAGILAELKMDPETVASGFLHDVVEDTGVTLGDVEELFGHDVAVIVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + ++ A RK L DIR +I+ LA RL MR L +L +Q I+ E ++I+
Sbjct: 112 RYKSNKEQLAENHRKLLLAMSKDIRVMIVKLADRLHNMRTLQHLRPDKQRRIANETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+A + + + +ELED+S RYL P Y + + S + I+I + + + L
Sbjct: 172 APIADRLGISTIKWELEDISLRYLNPQQYYRIVHLMNSRREDREKYIEIAIQDIQKALH- 230
Query: 293 DATLADL-VEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEV 351
DL + + + GR K YS KK+ + ++ D+L +RV++ +
Sbjct: 231 -----DLELPEAEIYGRPKHIYSIYKKMRDKHKQFSQLYDLLAIRVVVDSIKD------- 278
Query: 352 GERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRT 411
CY I + WK MP R KDYIA PKAN Y+SLH V V GK PL EIQIRT
Sbjct: 279 ----CYAVLGAIHTQWKPMPGRFKDYIAMPKANMYQSLHTTV-VGPEGK--PL-EIQIRT 330
Query: 412 EEMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 331 FEMHRVAEYGVAAHWAYKEG 350
>gi|126700359|ref|YP_001089256.1| GTP pyrophosphokinase (RelA/SpoT) [Clostridium difficile 630]
gi|254976339|ref|ZP_05272811.1| putative GTP pyrophosphokinase [Clostridium difficile QCD-66c26]
gi|255093724|ref|ZP_05323202.1| putative GTP pyrophosphokinase [Clostridium difficile CIP 107932]
gi|255101915|ref|ZP_05330892.1| putative GTP pyrophosphokinase [Clostridium difficile QCD-63q42]
gi|255307784|ref|ZP_05351955.1| putative GTP pyrophosphokinase [Clostridium difficile ATCC 43255]
gi|255315476|ref|ZP_05357059.1| putative GTP pyrophosphokinase [Clostridium difficile QCD-76w55]
gi|255518139|ref|ZP_05385815.1| putative GTP pyrophosphokinase [Clostridium difficile QCD-97b34]
gi|255651255|ref|ZP_05398157.1| putative GTP pyrophosphokinase [Clostridium difficile QCD-37x79]
gi|260684319|ref|YP_003215604.1| GTP pyrophosphokinase [Clostridium difficile CD196]
gi|260687978|ref|YP_003219112.1| GTP pyrophosphokinase [Clostridium difficile R20291]
gi|296452442|ref|ZP_06894143.1| GTP diphosphokinase [Clostridium difficile NAP08]
gi|296877791|ref|ZP_06901817.1| GTP diphosphokinase [Clostridium difficile NAP07]
gi|306521098|ref|ZP_07407445.1| putative GTP pyrophosphokinase [Clostridium difficile QCD-32g58]
gi|384361963|ref|YP_006199815.1| GTP pyrophosphokinase [Clostridium difficile BI1]
gi|423081063|ref|ZP_17069675.1| GTP diphosphokinase [Clostridium difficile 002-P50-2011]
gi|423085064|ref|ZP_17073522.1| GTP diphosphokinase [Clostridium difficile 050-P50-2011]
gi|423089842|ref|ZP_17078191.1| GTP diphosphokinase [Clostridium difficile 70-100-2010]
gi|115251796|emb|CAJ69631.1| GTP pyrophosphokinase (RelA/SpoT) [Clostridium difficile 630]
gi|260210482|emb|CBA64959.1| putative GTP pyrophosphokinase [Clostridium difficile CD196]
gi|260213995|emb|CBE06110.1| putative GTP pyrophosphokinase [Clostridium difficile R20291]
gi|296258772|gb|EFH05666.1| GTP diphosphokinase [Clostridium difficile NAP08]
gi|296431242|gb|EFH17063.1| GTP diphosphokinase [Clostridium difficile NAP07]
gi|357550919|gb|EHJ32724.1| GTP diphosphokinase [Clostridium difficile 050-P50-2011]
gi|357551372|gb|EHJ33162.1| GTP diphosphokinase [Clostridium difficile 002-P50-2011]
gi|357557606|gb|EHJ39140.1| GTP diphosphokinase [Clostridium difficile 70-100-2010]
Length = 735
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/324 (32%), Positives = 172/324 (53%), Gaps = 25/324 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA +L ++++D E I+AGLL VVE + + ++ G A L+ ++ +
Sbjct: 52 LAVANILIEMELDIETITAGLLHDVVEDTEYTYEDIKKEFGKEVADLVDGVTKLGQ---I 108
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + ++ + LRK F DIR +++ LA RL MR L Y+P + + E ++I+
Sbjct: 109 KYRSKEETQSENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMPPEKAKYKAKETLEIY 168
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
+AH + + + +ELED + R++ P Y L S + + + Y + +++ LK
Sbjct: 169 GGIAHRLGISKIKWELEDRALRFMDPEGYYD----LVSRVSMKRSQREDYIQGIVELLKD 224
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
DL V GR K YS +K+ K + EE+ D+ +R+++ N+
Sbjct: 225 --KFKDLSIPCDVYGRPKHFYSIYRKMQKKHKTFEEIFDLTAVRILV---DNV------- 272
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY I+ +LW+ +P R KDYIA PK N Y+SLH V V +G+ PL EIQIRT
Sbjct: 273 -KDCYAVLGIVHTLWRPIPGRFKDYIAMPKPNMYQSLHTTV-VGPDGE--PL-EIQIRTH 327
Query: 413 EMDMLAVNGTASHAFYKGGLTNPE 436
EM +A NG A+H YK G+++ E
Sbjct: 328 EMHNIAENGIAAHWKYKEGISSKE 351
>gi|170288003|ref|YP_001738241.1| (p)ppGpp synthetase I SpoT/RelA [Thermotoga sp. RQ2]
gi|170175506|gb|ACB08558.1| (p)ppGpp synthetase I, SpoT/RelA [Thermotoga sp. RQ2]
Length = 714
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 162/329 (49%), Gaps = 35/329 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESG-GVSIQQVRDRIGIGTAHLLHESLRVK 168
+T + V +LA L +D + A LL VVE G VS+ Q++ G A ++ +V
Sbjct: 57 ITHPVEVTKILAGLGVDVTTLVAALLHDVVEDGENVSLDQIKKEFGPEVARIVDGVTKV- 115
Query: 169 NNVNLKLQVLDD---ETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYL-----PRYQ 220
+++N + D + + F D+R + + LA RL MR + Y+ RY+
Sbjct: 116 SSINAPIGRDQDSRKKIETIQKMFFAMAEDMRVIFVKLADRLHNMRTIHYVQDQEKKRYK 175
Query: 221 QLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLID 280
+ E ++I+APLAH + + ELEDL+F+ L+P Y + + + +
Sbjct: 176 ----AYETLEIYAPLAHKLGIYSIKSELEDLAFKVLYPEEYYKIKKLVAEKRKEREKRTN 231
Query: 281 IYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIK 340
Y L L+ A V+GRYK YS +K+ + G+ EE+ D++ LRVI+K
Sbjct: 232 EYISLLKSALEEHKIKA------IVEGRYKHYYSIWRKMREKGKKFEEIYDLIALRVIVK 285
Query: 341 PSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGK 400
+ CYT I+ ++WK +P R KDYIA PK+NGYRSLH V G
Sbjct: 286 DVTT-----------CYTVLGIVHNIWKPLPGRFKDYIAAPKSNGYRSLHTTV---ITGY 331
Query: 401 TRPLMEIQIRTEEMDMLAVNGTASHAFYK 429
PL EIQIR EEM A G +H YK
Sbjct: 332 GEPL-EIQIRDEEMHREAEYGLIAHWIYK 359
>gi|408400921|ref|YP_006858884.1| GTP pyrophosphokinase [Streptococcus dysgalactiae subsp.
equisimilis RE378]
gi|407967149|dbj|BAM60387.1| GTP pyrophosphokinase [Streptococcus dysgalactiae subsp.
equisimilis RE378]
Length = 739
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 173/347 (49%), Gaps = 26/347 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +LADL +DA ++ G L VVE +++ + G ++ ++
Sbjct: 51 IVHPIQVAGILADLHLDAVTVACGFLHDVVEDTDITLDNIEFDFGKDVRDIVDGVTKLGK 110
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E
Sbjct: 111 ---VEYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRET 167
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLAH + + + +ELEDL+FRYL + + + + L+D ++
Sbjct: 168 MEIYAPLAHRLGISRIKWELEDLAFRYLNETEFYKISHMMNEKRREREALVD----DIVT 223
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+K+ T L D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 224 KIKSYTTEQGLFGD--VYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCVMETQSDV--- 278
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQ
Sbjct: 279 --------YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQ 325
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALR 455
IRT+EM +A G A+H YK G+ K M EL L+
Sbjct: 326 IRTKEMHQVAEYGVAAHWAYKKGVRGKVNQAEQKVGMNWIKELVELQ 372
>gi|313888521|ref|ZP_07822188.1| GTP diphosphokinase [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845550|gb|EFR32944.1| GTP diphosphokinase [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 475
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 110/321 (34%), Positives = 175/321 (54%), Gaps = 25/321 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+V+L+LAD+ MD I AGLL VVE V+++ V++ G A L+ ++K L
Sbjct: 50 LNVSLILADMNMDIATIVAGLLHDVVEDTDVTLEDVKNEFGQEIADLVDGVTKLKQ---L 106
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ +++ A +RK L DIR +I+ LA RL MR L+Y+ +++ + E ++I+
Sbjct: 107 NYKNKEEKQAENIRKMVLAMAKDIRVIIVKLADRLHNMRTLEYMTDAKKIEKAKETVEIY 166
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+A + + + +ELEDLS RYL Y + + + LI+ E L + LK
Sbjct: 167 APIADRLGMSRIKWELEDLSLRYLDEEGYYELVDMVNKRRNEREDLINHIIELLEENLKN 226
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++GR K+ YS KK+ K G++ +E+ D+ +R++ T V
Sbjct: 227 VGI------ECEIKGRPKNFYSIYKKMKKKGKVFDEIYDLSAVRIL---------THSV- 270
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY ++ +L+K +P R KDYIA PK N Y+SLH V + +NG+T E+QIRT
Sbjct: 271 -KDCYGALGVVHTLFKPIPGRFKDYIAMPKPNKYQSLHTTV-IDNNGET---FEVQIRTY 325
Query: 413 EMDMLAVNGTASHAFYKGGLT 433
EM A G A+H YK G++
Sbjct: 326 EMHQTAEYGIAAHWKYKAGVS 346
>gi|269798272|ref|YP_003312172.1| (p)ppGpp synthetase I SpoT/RelA [Veillonella parvula DSM 2008]
gi|269094901|gb|ACZ24892.1| (p)ppGpp synthetase I, SpoT/RelA [Veillonella parvula DSM 2008]
Length = 746
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 162/325 (49%), Gaps = 25/325 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA +LA LQ+D + A L+ VVE S + + + G A L+ ++
Sbjct: 69 LAVADILAHLQIDHITLMAALMHDVVEDTSYSKEDLEEMFGSEVAFLVDGVTKLNQ---F 125
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +D RK L D+R +++ L RL MR L ++ +Q I+ E ++I
Sbjct: 126 QYETKEDRQMENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKHMRSDKQKRIAKETLEIF 185
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + +ELEDLSFRYL P Y + ++ + +++ QL + L
Sbjct: 186 APLAHRLGIFNVKWELEDLSFRYLEPEKYYDLVDQMKQKRQVREDIVNDTMSQLTKALSE 245
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
AD ++GR K YS KK+ KD R ++ D+L +RVI+ +
Sbjct: 246 AHIKAD------IKGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDSIPD-------- 291
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I SLWK +P+R KDYI+ PK+N Y+SLH V G +EIQIRT
Sbjct: 292 ---CYAVLGIAHSLWKPLPYRFKDYISMPKSNMYQSLHTTV----IGTMGQPVEIQIRTW 344
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEE 437
EM ++ G A+H YK G N ++
Sbjct: 345 EMHRVSEYGVAAHWRYKEGNKNGDK 369
>gi|294794004|ref|ZP_06759141.1| GTP diphosphokinase [Veillonella sp. 3_1_44]
gi|294455574|gb|EFG23946.1| GTP diphosphokinase [Veillonella sp. 3_1_44]
Length = 735
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 162/325 (49%), Gaps = 25/325 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA +LA LQ+D + A L+ VVE S + + + G A L+ ++
Sbjct: 58 LAVADILAHLQIDHITLMAALMHDVVEDTSYSKEDLEEMFGSEVAFLVDGVTKLNQ---F 114
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +D RK L D+R +++ L RL MR L ++ +Q I+ E ++I
Sbjct: 115 QYETKEDRQMENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKHMRSDKQKRIAKETLEIF 174
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + +ELEDLSFRYL P Y + ++ + +++ QL + L
Sbjct: 175 APLAHRLGIFNVKWELEDLSFRYLEPEKYYDLVDQMKQKRQVREDIVNDTMRQLTKALSE 234
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
AD ++GR K YS KK+ KD R ++ D+L +RVI+ +
Sbjct: 235 AHIKAD------IKGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDSIPD-------- 280
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I SLWK +P+R KDYI+ PK+N Y+SLH V G +EIQIRT
Sbjct: 281 ---CYAVLGIAHSLWKPLPYRFKDYISMPKSNMYQSLHTTV----IGTMGQPVEIQIRTW 333
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEE 437
EM ++ G A+H YK G N ++
Sbjct: 334 EMHRVSEYGVAAHWRYKEGNKNGDK 358
>gi|119503992|ref|ZP_01626073.1| RelA/SpoT protein [marine gamma proteobacterium HTCC2080]
gi|119459995|gb|EAW41089.1| RelA/SpoT protein [marine gamma proteobacterium HTCC2080]
Length = 744
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 159/327 (48%), Gaps = 28/327 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L+ L +LA+L++ + + AG L + V +SI +R R G A LL LR+
Sbjct: 65 LSVGLETVQILAELRLGPDALIAGFLYRSVRQQVISIDTLRHRFGDKVASLLDGVLRMAA 124
Query: 170 NVNLK----LQVLDDETAAAL---RKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQL 222
+L + VL A + R D+R ++ LA R MR L ++Q
Sbjct: 125 VSDLTDLSDVPVLGQSAAPNINIRRMLVAIVDDVRVALIKLAERTVAMRGLKGAEEHRQQ 184
Query: 223 MISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIY 282
I+ EV ++APLAH + +L +ELEDLSFRY +Y + + L I
Sbjct: 185 RIAWEVFNVYAPLAHRLGVGHLKWELEDLSFRYTNKDAYHRIASLLDGRRQDRDSFIARV 244
Query: 283 KEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPS 342
QL Q L T + LA + GR K YS +K+ + G +V+D+ LR+++
Sbjct: 245 NAQLTQTL-TQSELA-----FEITGRAKHIYSIWRKMQRKGIGFSQVHDIRALRILVDDV 298
Query: 343 SNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTR 402
+ ACY T ++ +W+ +P+ DYIA PK NGYRSLH AV + GK
Sbjct: 299 A-----------ACYQTLGVVHGMWRNIPNEFDDYIASPKENGYRSLHTAV-IGPEGK-- 344
Query: 403 PLMEIQIRTEEMDMLAVNGTASHAFYK 429
++E+QIRTEEM A G +H YK
Sbjct: 345 -ILEVQIRTEEMHEEAELGVCAHWRYK 370
>gi|429760116|ref|ZP_19292606.1| GTP diphosphokinase [Veillonella atypica KON]
gi|429178521|gb|EKY19799.1| GTP diphosphokinase [Veillonella atypica KON]
Length = 746
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 158/319 (49%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA +LA LQ+D + A LL VVE + + + G A L+ ++
Sbjct: 69 LAVAEILAHLQIDHITLIAALLHDVVEDTEYTKEDIEKLFGAEVAFLVDGVTKLNQ---F 125
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +D RK L D+R +++ L RL MR L + +Q I+ E ++I
Sbjct: 126 QYETKEDRQMENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKDMRSDKQKRIAKETLEIF 185
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + +ELEDLSFRYL P Y + ++ + +++ EQL + L
Sbjct: 186 APLAHRLGIFNVKWELEDLSFRYLEPDKYYDLVDQMKQKRQAREDIVNDTMEQLTKALGE 245
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
AD ++GR K YS KK+ KD R ++ D+L +RVI+ +
Sbjct: 246 AGIKAD------IKGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDTVPD-------- 291
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I S+WK +P+R KDYI+ PK+N Y+SLH V G +EIQIRT
Sbjct: 292 ---CYAVLGIAHSIWKPLPYRFKDYISMPKSNMYQSLHTTV----IGTMGQPVEIQIRTW 344
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM ++ G A+H YK G
Sbjct: 345 EMHRVSEYGVAAHWRYKEG 363
>gi|282850510|ref|ZP_06259889.1| GTP diphosphokinase [Veillonella parvula ATCC 17745]
gi|282580003|gb|EFB85407.1| GTP diphosphokinase [Veillonella parvula ATCC 17745]
Length = 746
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 162/325 (49%), Gaps = 25/325 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA +LA LQ+D + A L+ VVE S + + + G A L+ ++
Sbjct: 69 LAVADILAHLQIDHITLMAALMHDVVEDTSYSKEDLEEMFGSEVAFLVDGVTKLNQ---F 125
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +D RK L D+R +++ L RL MR L ++ +Q I+ E ++I
Sbjct: 126 QYETKEDRQMENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKHMRSDKQKRIAKETLEIF 185
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + +ELEDLSFRYL P Y + ++ + +++ QL + L
Sbjct: 186 APLAHRLGIFNVKWELEDLSFRYLEPEKYYDLVDQMKQKRQVREDIVNDTMRQLTKALSE 245
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
AD ++GR K YS KK+ KD R ++ D+L +RVI+ +
Sbjct: 246 AHIKAD------IKGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDSIPD-------- 291
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I SLWK +P+R KDYI+ PK+N Y+SLH V G +EIQIRT
Sbjct: 292 ---CYAVLGIAHSLWKPLPYRFKDYISMPKSNMYQSLHTTV----IGTMGQPVEIQIRTW 344
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEE 437
EM ++ G A+H YK G N ++
Sbjct: 345 EMHRVSEYGVAAHWRYKEGNKNGDK 369
>gi|237667442|ref|ZP_04527426.1| RelA/SpoT family protein [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|237655790|gb|EEP53346.1| RelA/SpoT family protein [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 737
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 110/332 (33%), Positives = 167/332 (50%), Gaps = 44/332 (13%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
++VA +LA+L MD I AGLL V+E S + A+L+ ++ +
Sbjct: 48 IAVAEILAELGMDTNTIVAGLLHDVIEDTDCSFEDASRMFNPEVANLVDGVTKLTKLGEM 107
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A +RK L DIR +I+ LA RL MR L ++P +Q + E + I+
Sbjct: 108 EYKTKEEQQADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKFMPANKQKNKAKETLDIY 167
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELEDL FRYL HE K D+ K+ + ++
Sbjct: 168 APLAHRLGMSKIKWELEDLCFRYL--------------HE---KEYYDLVKDIAEKRVER 210
Query: 293 DATLADLVEDV-----------SVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKP 341
++ + D+V D+ + GR K YS KK++ + EE+ D+ +RV
Sbjct: 211 ESYIQDIVNDLYKKLEGAGIDSDIDGRPKHFYSIYKKMVNKNKSIEEIFDLTAIRV---- 266
Query: 342 SSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKT 401
LVN+ + CY I+ ++++ +P R KDYIA PK N Y+SLH V + GKT
Sbjct: 267 ---LVNSV----KDCYGVLGIVHTIYRPIPGRFKDYIAMPKPNMYQSLHTTV-IGPQGKT 318
Query: 402 RPLMEIQIRTEEMDMLAVNGTASHAFYKGGLT 433
EIQIRT EM A G A+H YK G T
Sbjct: 319 ---FEIQIRTFEMHKTAEYGIAAHWKYKEGDT 347
>gi|2498843|sp|Q54089.1|RELA_STREQ RecName: Full=Bifunctional (p)ppGpp synthase/hydrolase RelA;
Includes: RecName: Full=GTP pyrophosphokinase; AltName:
Full=(p)ppGpp synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=Stringent
response-like protein; AltName: Full=ppGpp synthase I;
Includes: RecName: Full=Guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase; AltName: Full=Penta-phosphate
guanosine-3'-pyrophosphohydrolase; Short=(ppGpp)ase
gi|407881|emb|CAA51353.1| stringent response-like protein [Streptococcus dysgalactiae subsp.
equisimilis]
gi|742310|prf||2009358E stringent response-like protein
Length = 739
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 173/347 (49%), Gaps = 26/347 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +LADL +DA ++ G L VVE +++ + G ++ ++
Sbjct: 51 IVHPIQVAGILADLHLDAVTVACGFLHDVVEDTDITLDNIEFDFGKDVRDIVDGVTKLGK 110
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E
Sbjct: 111 ---VEYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRET 167
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLAH + + + +ELEDL+FRYL + + + + L+D ++
Sbjct: 168 MEIYAPLAHRLGISRIKWELEDLAFRYLNETEFYKISHMMNEKRREREALVD----DIVT 223
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+K+ T L D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 224 KIKSYTTEQGLFGD--VYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCVMETQSDV--- 278
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQ
Sbjct: 279 --------YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQ 325
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALR 455
IRT+EM +A G A+H YK G+ K M EL L+
Sbjct: 326 IRTKEMHQVAEYGVAAHWAYKKGVRGKVNQAEQKVGMNWIKELVELQ 372
>gi|410493960|ref|YP_006903806.1| GTP pyrophosphokinase [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
gi|410439120|emb|CCI61748.1| K00951 GTP pyrophosphokinase [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
Length = 739
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 173/347 (49%), Gaps = 26/347 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +LADL +DA ++ G L VVE +++ + G ++ ++
Sbjct: 51 IVHPIQVAGILADLHLDAVTVACGFLHDVVEDTDITLDNIEFDFGKDVRDIVDGVTKLGK 110
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E
Sbjct: 111 ---VEYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRET 167
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLAH + + + +ELEDL+FRYL + + + + L+D ++
Sbjct: 168 MEIYAPLAHRLGISRIKWELEDLAFRYLNETEFYKISHMMNEKRREREALVD----DIVT 223
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+K+ T L D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 224 KIKSYTTEQGLFGD--VYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCVMETQSDV--- 278
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQ
Sbjct: 279 --------YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQ 325
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALR 455
IRT+EM +A G A+H YK G+ K M EL L+
Sbjct: 326 IRTKEMHQVAEYGVAAHWAYKKGVRGKVNQAEQKVGMNWIKELVELQ 372
>gi|344167228|emb|CCA79431.1| putative bifunctional: (p)ppGpp synthetase II; guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase; precursor (spoT)
[blood disease bacterium R229]
Length = 810
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 191/395 (48%), Gaps = 32/395 (8%)
Query: 48 SPAPLPSTAGEKMVVKLVGAFNELTERMNVLSSSSSRLLFKALKLSIPMLQSLPLSPDSR 107
P P+ + VV + G LTE+++ L + +L+ +A S L S
Sbjct: 78 GPTSQPAAPPRQQVVSIAG----LTEKLSYLKPADMKLVKEAFHFSDEA--HLGQYRQSG 131
Query: 108 SP-LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLR 166
P +T ++VA + A ++D + I A LL V+E GV+ ++ ++ G A L+ +
Sbjct: 132 EPYITHPVAVAEICAGWKLDVQSIMAALLHDVIEDQGVTKSELAEKFGPKVAELVDGLTK 191
Query: 167 VKNNVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMIS 225
+ L+ Q + A + RK L D+R +++ LA R MR LD++P ++ I+
Sbjct: 192 LDK---LEFQSREQAQAESFRKMLLAMARDVRVILVKLADRTHNMRTLDHVPPEKRRRIA 248
Query: 226 LEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQ 285
E M+I+AP+AH + N EL++LSFR F Y ++ +++ + ++ E
Sbjct: 249 GETMEIYAPIAHRLGLNTTYRELQELSFRIGSSFRYATLEKAVKAARGNRREVVSRILEA 308
Query: 286 LLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNL 345
+ L A+L GR K+ YS +K+ +V DV G RV+++
Sbjct: 309 AQRALGDAGIPAELT------GREKTLYSIYRKMHDKQLSFSQVLDVYGFRVVVET---- 358
Query: 346 VNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLM 405
+ CY + SL+K MP + KDYIA PK NGY+SLH + V G +
Sbjct: 359 -------QMQCYMAVGALHSLYKPMPGKFKDYIAIPKINGYQSLHTTL-VGPFGTP---V 407
Query: 406 EIQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKR 440
E QIRT EM+ +A G A+H YK P+ A++
Sbjct: 408 EFQIRTREMNQIAEAGVAAHWMYKQHHDEPDRAQQ 442
>gi|443322004|ref|ZP_21051040.1| (p)ppGpp synthetase, RelA/SpoT family [Gloeocapsa sp. PCC 73106]
gi|442788304|gb|ELR98001.1| (p)ppGpp synthetase, RelA/SpoT family [Gloeocapsa sp. PCC 73106]
Length = 754
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 113/325 (34%), Positives = 167/325 (51%), Gaps = 26/325 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ ++VA LL DL D+ +I+AG L VVE VS++++ R G L+ ++
Sbjct: 65 IVHPVAVAGLLRDLGGDSAMIAAGFLHDVVEDTEVSLEEIESRFGEQVRQLVEGVTKLSK 124
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + A R+ F DIR +++ LA RL MR L +L +Q I+LE
Sbjct: 125 ---FEFSSKTERQAENFRRMFLAMAKDIRVIVVKLADRLHNMRTLQHLSLEKQQAIALET 181
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+I APLA+ + L +ELEDLSF+YL P +Y + + T + I E++ Q
Sbjct: 182 KEIFAPLANRLGIGRLKWELEDLSFKYLEPEAYRTMQNHIAEKRTDREARI----EKVTQ 237
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
LK D ++ + +QGR K Y +K+ + E+ D+ GLR+I+ N
Sbjct: 238 LLK-DRLQTIGIKIIEIQGRPKHLYGIYQKMCLQQKQFNEIYDIAGLRLIVD------NK 290
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
E CY I+ ++ +P R KDYI PK+N Y+SLH +V V NG RPL E+Q
Sbjct: 291 EE-----CYRALAIVHDTFRPIPGRFKDYIGLPKSNRYQSLHTSV-VGLNG--RPL-EVQ 341
Query: 409 IRTEEMDMLAVNGTASHAFYK--GG 431
IRT EM +A G A+H YK GG
Sbjct: 342 IRTLEMHQVAEYGIAAHWKYKESGG 366
>gi|339624968|ref|ZP_08660757.1| GTP pyrophosphokinase [Fructobacillus fructosus KCTC 3544]
Length = 745
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 115/330 (34%), Positives = 172/330 (52%), Gaps = 24/330 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +LA+L+MD I AG L +VE V+++ V D+ G ++ ++
Sbjct: 51 IAHPIQVAGILAELKMDGPTIVAGFLHDIVEDTPVTLEDVVDKFGPVVGRIVDGVTKISK 110
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+K Q + A RK L DIR +I+ LA RL MR LD L +Q IS E
Sbjct: 111 ---IKYQDSKVQLAENHRKLLLAMAKDIRVIIVKLADRLHNMRTLDALRPDKQRRISQET 167
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+APLA + + + +ELEDLS YL P +Y + + + +I +E + Q
Sbjct: 168 LSIYAPLADRLGISAIKWELEDLSLSYLEPDAYHKIASMMSMKRDERMAVI---QEAIGQ 224
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
++ L +EDVSV GR K YS +KL+ + +E+ D+ +RV+ + NL +T
Sbjct: 225 IEESIDELH--IEDVSVYGRPKHIYSIYRKLVDKHKSFDEIYDLSAIRVL---TENLTDT 279
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
Y I + WK +P R KDYIA PK NGY+SLH V + +G RPL E+Q
Sbjct: 280 --------YAVLGAIHAHWKPLPGRFKDYIALPKPNGYQSLHTTV-IGPSG--RPL-EVQ 327
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEA 438
IRT +M +A G A+H YK + ++A
Sbjct: 328 IRTYKMHQVAEFGVAAHWAYKKNKGSDQQA 357
>gi|339483990|ref|YP_004695776.1| (p)ppGpp synthetase I SpoT/RelA [Nitrosomonas sp. Is79A3]
gi|338806135|gb|AEJ02377.1| (p)ppGpp synthetase I, SpoT/RelA [Nitrosomonas sp. Is79A3]
Length = 701
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/326 (32%), Positives = 166/326 (50%), Gaps = 35/326 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ ++VA +L+ L +DA ++A LL VVE +S ++ +R G A L+ V
Sbjct: 46 ISHPVAVARILSTLHLDAPTLTAALLHDVVEDTDISKAEISERFGEPVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ Q ++ A RK L D+R +++ LA RL MR L+ + +Q I+ E
Sbjct: 103 LTKIEFQTQEEAQAENFRKMLLAMARDVRVILIKLADRLHNMRTLEAMLPAKQRSIARET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+AH + N + EL++L FRY +P Y + ++ + ++ ++L+
Sbjct: 163 LEIYAPIAHRLGLNNIYQELQELGFRYSYPMRYKVLVKATKAARGNRREIVG----KILE 218
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIK--PSSNLV 346
+ D L + + V GR K YS K+++ EV D+ G RVI+K PS
Sbjct: 219 AI--DLKLKESGLNAEVTGREKHLYSIYMKMVEKHLSFSEVLDIYGFRVIVKDIPS---- 272
Query: 347 NTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPL-- 404
CY ++ SL+K +P + KDYIA PK NGY+SLH N P
Sbjct: 273 ---------CYVALGMLHSLYKPIPGKFKDYIAIPKTNGYQSLH-------NTLLGPFGI 316
Query: 405 -MEIQIRTEEMDMLAVNGTASHAFYK 429
+EIQIRT EM +A NG ASH YK
Sbjct: 317 PIEIQIRTAEMHRIAENGVASHWLYK 342
>gi|320547771|ref|ZP_08042055.1| GTP diphosphokinase [Streptococcus equinus ATCC 9812]
gi|320447531|gb|EFW88290.1| GTP diphosphokinase [Streptococcus equinus ATCC 9812]
Length = 740
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 172/343 (50%), Gaps = 26/343 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL +D ++ G L VVE +++ ++ G ++ + + V
Sbjct: 55 IQVAGILADLHLDVVTVACGFLHDVVEDTDITLDEIEAEFG-KDVRIIVDGVTKLGKVEY 113
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K +++ A RK + DIR +++ LA RL MR L +L + +Q IS E M+I+
Sbjct: 114 KSH--EEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELEDLSFRYL + + + + L+D ++++ +K
Sbjct: 172 APLAHRLGISRIKWELEDLSFRYLNEIEFYKISHMMNEKRREREALVD----EIVKKIKD 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
L D V GR K YS +K+ + +++ D++ +R I++ S++
Sbjct: 228 YTEEQGLYGD--VYGRPKHLYSIYRKMRDKKKRFDQIYDLIAIRCIMETPSDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQIRT+
Sbjct: 279 ----YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQIRTK 329
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALR 455
EM +A G A+H YK G+ + + M EL L+
Sbjct: 330 EMHQVAEYGVAAHWAYKKGIKGKVDDQEQAVGMSWIKELVELQ 372
>gi|313884151|ref|ZP_07817917.1| putative GTP diphosphokinase [Eremococcus coleocola ACS-139-V-Col8]
gi|312620598|gb|EFR32021.1| putative GTP diphosphokinase [Eremococcus coleocola ACS-139-V-Col8]
Length = 735
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 166/326 (50%), Gaps = 25/326 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA L MDA+ I+ G L VVE S++++ + A L+ ++ L
Sbjct: 55 IQVAGILAKLHMDADTIATGFLHDVVEDTPHSLEEISEEFSPAVAFLIDGVTKLGR---L 111
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K Q + A RK L DIR +I+ LA RL MR + Y +Q+ S E + ++
Sbjct: 112 KFQSKKEALAENHRKMLLAMAKDIRVIIVKLADRLHNMRTMKYQKPEKQVEKSQEAIDVY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + N + +ELED++ RY+ P +Y + + S + I+ +L
Sbjct: 172 APLADRIGMNSIKWELEDIALRYINPEAYYNIVHLMDSKREEREHYINATISEL-----Q 226
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
DA +A +E ++ GR K YS +K++ + E++ D+L +RV++ +
Sbjct: 227 DAIMAIDIEG-TIYGRPKHIYSIYRKMVDQKKDFEDIFDLLAIRVLVDSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY + + WK MP R KDYIA PKAN Y+S+H V + GK +EIQIRT
Sbjct: 278 ---CYAVLGAVHTQWKPMPGRFKDYIAMPKANLYQSIHTTV-IGPQGKP---VEIQIRTY 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEA 438
+M +A G A+H YK G T+ E+
Sbjct: 331 QMHEVAEYGVAAHWAYKEGKTDKVES 356
>gi|398939549|ref|ZP_10668642.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM41(2012)]
gi|398163871|gb|EJM52020.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM41(2012)]
Length = 701
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 162/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + ++ + G A L+ V
Sbjct: 46 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALQAQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ + P ++ ++ K +++ +E L
Sbjct: 163 LEIYAPIANRLGMHAIRIEFEDLGFKAMHPMRSARINQAVKRARGNRKEIVNKIEESLSH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D + V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAIDEIQGE------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|146341381|ref|YP_001206429.1| GTP pyrophosphokinase [Bradyrhizobium sp. ORS 278]
gi|146194187|emb|CAL78208.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Bradyrhizobium sp.
ORS 278]
Length = 763
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 111/329 (33%), Positives = 163/329 (49%), Gaps = 25/329 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
T L VA +L DL++D I A LL +E + ++ G L+ ++K
Sbjct: 81 FTHPLEVAAILTDLKLDDATIVAALLHDTIEDTEATRAEIDRFFGPEIGALVEGLTKLKR 140
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+L + + A LRK L D +R L++ LA RL MR LD++P + I+ E
Sbjct: 141 ---LELVSREAKQAENLRKLLLAIADDVRVLLVKLADRLHNMRTLDFVPEASRRRIAEET 197
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+APLA + + ELEDLSFR L P +Y V L + ++ LI + QL +
Sbjct: 198 LDIYAPLAGRMGMQEMREELEDLSFRTLDPQAYGVVMQRLDALADRNRNLIGEIESQLAR 257
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ A V GR K +S K+ + E+++D+ G RVI+
Sbjct: 258 KFRDHGLTA------RVFGRRKRPFSIWTKMERKSIGFEQLSDIFGFRVIMPDLE----- 306
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
+CY I+ + W +P R KDYI+ PK N YRS+H V GK R +E+Q
Sbjct: 307 ------SCYRALGIVHTTWPVVPGRFKDYISTPKQNDYRSIHTT--VIGPGKQR--VELQ 356
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
IRTE+MD +A G A+HAFYK + +P E
Sbjct: 357 IRTEDMDQIAELGIAAHAFYKDDIGSPTE 385
>gi|386316165|ref|YP_006012329.1| (p)ppGpp synthetase [Streptococcus dysgalactiae subsp. equisimilis
ATCC 12394]
gi|323126452|gb|ADX23749.1| (p)ppGpp synthetase [Streptococcus dysgalactiae subsp. equisimilis
ATCC 12394]
Length = 739
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 173/347 (49%), Gaps = 26/347 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +LADL +DA ++ G L VVE +++ + G ++ ++
Sbjct: 51 IVHPIQVAGILADLHLDAVTVACGFLHDVVEDTDITLDNIEFDFGKDVRDIVDGVTKLGK 110
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E
Sbjct: 111 ---VEYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRET 167
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLAH + + + +ELEDL+FRYL + + + + L+D ++
Sbjct: 168 MEIYAPLAHRLGISRIKWELEDLAFRYLNETEFYKISHMMNEKRREREALVD----DIVT 223
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+K+ T L D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 224 KIKSYTTEQGLFGD--VYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCVMETQSDV--- 278
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQ
Sbjct: 279 --------YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQ 325
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALR 455
IRT+EM +A G A+H YK G+ K M EL L+
Sbjct: 326 IRTKEMHQVAEYGVAAHWAYKKGVRGKVNQAEQKVGMNWIKELVELQ 372
>gi|294792133|ref|ZP_06757281.1| GTP diphosphokinase [Veillonella sp. 6_1_27]
gi|294457363|gb|EFG25725.1| GTP diphosphokinase [Veillonella sp. 6_1_27]
Length = 735
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 162/325 (49%), Gaps = 25/325 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA +LA LQ+D + A L+ VVE S + + + G A L+ ++
Sbjct: 58 LAVADILAHLQIDHITLMAALMHDVVEDTSYSKEDLEEMFGSEVAFLVDGVTKLNQ---F 114
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +D RK L D+R +++ L RL MR L ++ +Q I+ E ++I
Sbjct: 115 QYETKEDRQMENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKHMRSDKQKRIAKETLEIF 174
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + +ELEDLSFRYL P Y + ++ + +++ QL + L
Sbjct: 175 APLAHRLGIFNVKWELEDLSFRYLEPEKYYDLVDQMKQKRQVREDIVNDTMRQLTKALSE 234
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
AD ++GR K YS KK+ KD R ++ D+L +RVI+ +
Sbjct: 235 AHIKAD------IKGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDSIPD-------- 280
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I SLWK +P+R KDYI+ PK+N Y+SLH V G +EIQIRT
Sbjct: 281 ---CYAVLGIAHSLWKPLPYRFKDYISMPKSNMYQSLHTTV----IGTMGQPVEIQIRTW 333
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEE 437
EM ++ G A+H YK G N ++
Sbjct: 334 EMHRVSEYGVAAHWRYKEGNKNGDK 358
>gi|251781660|ref|YP_002995962.1| GTP pyrophosphokinase [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242390289|dbj|BAH80748.1| GTP pyrophosphokinase [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
Length = 739
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 173/347 (49%), Gaps = 26/347 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +LADL +DA ++ G L VVE +++ + G ++ ++
Sbjct: 51 IVHPIQVAGILADLHLDAVTVACGFLHDVVEDTDITLDNIEFDFGKDVRDIVDGVTKLGK 110
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E
Sbjct: 111 ---VEYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRET 167
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLAH + + + +ELEDL+FRYL + + + + L+D ++
Sbjct: 168 MEIYAPLAHRLGISRIKWELEDLAFRYLNETEFYKISHMMNEKRREREALVD----DIVT 223
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+K+ T L D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 224 KIKSYTTEQGLFGD--VYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCVMETQSDV--- 278
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQ
Sbjct: 279 --------YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQ 325
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALR 455
IRT+EM +A G A+H YK G+ K M EL L+
Sbjct: 326 IRTKEMHQVAEYGVAAHWAYKKGVRGKVNQAEQKVGMNWIKELVELQ 372
>gi|254556843|ref|YP_003063260.1| GTP pyrophosphokinase [Lactobacillus plantarum JDM1]
gi|300768156|ref|ZP_07078061.1| GTP diphosphokinase [Lactobacillus plantarum subsp. plantarum ATCC
14917]
gi|308180784|ref|YP_003924912.1| GTP pyrophosphokinase [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|380032762|ref|YP_004889753.1| GTP pyrophosphokinase / pyrophosphohydrolase [Lactobacillus
plantarum WCFS1]
gi|254045770|gb|ACT62563.1| GTP pyrophosphokinase [Lactobacillus plantarum JDM1]
gi|300494220|gb|EFK29383.1| GTP diphosphokinase [Lactobacillus plantarum subsp. plantarum ATCC
14917]
gi|308046275|gb|ADN98818.1| GTP pyrophosphokinase [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|342242005|emb|CCC79239.1| GTP pyrophosphokinase / pyrophosphohydrolase [Lactobacillus
plantarum WCFS1]
Length = 755
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 166/320 (51%), Gaps = 26/320 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD E +++G L VVE GV++ V + G A ++ ++ +
Sbjct: 55 IQVAGILAELKMDPETVASGFLHDVVEDTGVTLGDVEELFGHDVAVIVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + ++ A RK L DIR +I+ LA RL MR L +L +Q I+ E ++I+
Sbjct: 112 RYKSNKEQLAENHRKLLLAMSKDIRVMIVKLADRLHNMRTLQHLRPDKQRRIANETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+A + + + +ELED+S RYL P Y + + S + I+I + + + L
Sbjct: 172 APIADRLGISTIKWELEDISLRYLNPQQYYRIVHLMNSRREDREKYIEIAIQDIQKALH- 230
Query: 293 DATLADL-VEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEV 351
DL + + + GR K YS KK+ + ++ D+L +RV++ +
Sbjct: 231 -----DLELPEAEIYGRPKHIYSIYKKMRDKHKQFSQLYDLLAIRVVVDSIKD------- 278
Query: 352 GERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRT 411
CY I + WK MP R KDYIA PKAN Y+SLH V V GK PL EIQIRT
Sbjct: 279 ----CYAVLGAIHTQWKPMPGRFKDYIAMPKANMYQSLHTTV-VGPEGK--PL-EIQIRT 330
Query: 412 EEMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 331 FEMHRVAEYGVAAHWAYKEG 350
>gi|406886013|gb|EKD33114.1| hypothetical protein ACD_76C00094G0045 [uncultured bacterium]
Length = 496
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 174/341 (51%), Gaps = 27/341 (7%)
Query: 115 SVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLK 174
+ A+ LA++++D +++AGLL V E +++ VR+ G A ++ +++
Sbjct: 52 ATAIKLAEMRLDLPIVAAGLLHDVPEDTPRTLEDVREHFGDDIASMVEGVTKLEKVRYRG 111
Query: 175 LQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHA 233
L+ A LRK F DIR + + RL M L +P ++ I+ EV++I+A
Sbjct: 112 LE----RYAENLRKMFVAMASDIRVVFIKFCDRLHNMETLYIIPERKRERIAKEVLEIYA 167
Query: 234 PLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLI-DIYKEQLLQCLKT 292
P+AH + + +LED +FRY++P Y +V + T + + DI + LK+
Sbjct: 168 PVAHRLGMGEIRGQLEDFAFRYVYPKEYQWVKGLVEKKTTEKEEYLNDIISKAQKTVLKS 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
++ SV GR K +S KKLL+ R +V+D++ +RVI+ ++
Sbjct: 228 G------IQTASVHGRLKHLFSLYKKLLRFERDINKVHDLIAVRVIVNDVAD-------- 273
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I+ LW+ + R KDYIA+PK NGY+SLH V +DNG+ ++E QIRT
Sbjct: 274 ---CYAALGILHQLWRPLAGRIKDYIAQPKPNGYQSLHTTV-FADNGQ---IVEFQIRTP 326
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAA 453
+M A G ASH YK ++ ++ + EL+A
Sbjct: 327 QMHERAEYGIASHWQYKEADKKTKQIAWVEELAKIQKELSA 367
>gi|386851465|ref|YP_006269478.1| GTP pyrophosphokinase [Actinoplanes sp. SE50/110]
gi|359838969|gb|AEV87410.1| GTP pyrophosphokinase [Actinoplanes sp. SE50/110]
Length = 810
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 167/321 (52%), Gaps = 27/321 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LA+L MD + A LL +E ++Q+R+ G A L+ ++
Sbjct: 129 ITHPLAVATILANLGMDTTTLVAALLHDTIEDTDYGLEQMRNDFGAEVALLVDGVTKLD- 187
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++++ D A +RK + D R L++ LA RL MR L +LPR +Q + E
Sbjct: 188 ----RVKLGDAAKAETIRKMVVAMAKDPRVLVIKLADRLHNMRTLTFLPRAKQEQKAKET 243
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I APLAH + N + +ELEDL+F LFP + ++ + H+ + L+ Q+
Sbjct: 244 LEILAPLAHRLGMNTIKWELEDLAFGTLFPKRFEEINRLIGEHQPQREALL----RQVTN 299
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ D A + + + GR K YS +K++ GR ++ D++G+R+ LV+T
Sbjct: 300 RVSLDLKSAKIKAETT--GRPKHLYSIYQKMIVRGRDFNDIYDLVGVRI-------LVDT 350
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY +I + W+ +P R KDYIA PK N Y+SLH V + GK +E+Q
Sbjct: 351 V----RDCYAALGVIHANWQPVPGRFKDYIAMPKFNMYQSLHTTV-IGPTGKP---VEMQ 402
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT M A G A+H YK
Sbjct: 403 IRTFAMHRTAEFGIAAHWKYK 423
>gi|256822070|ref|YP_003146033.1| (p)ppGpp synthetase I SpoT/RelA [Kangiella koreensis DSM 16069]
gi|256795609|gb|ACV26265.1| (p)ppGpp synthetase I, SpoT/RelA [Kangiella koreensis DSM 16069]
Length = 736
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 171/339 (50%), Gaps = 26/339 (7%)
Query: 98 QSLPLSPDSR-SPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIG 156
Q++ ++P + + L L +A +L D + ++A +L V +G V I+ ++D++G
Sbjct: 47 QNVSVTPVLKLNTLAAGLELAEVLTHFNADPDTLTAAILLPSVIAGSVKIETIKDKVGST 106
Query: 157 TAHLLHESLRVKNNVNLKLQVL---DDETAAALRKFCLTYY-DIRALILDLAIRLDMMRH 212
A L+ + +++ +L+ + D + +LRK L D R ++L LA R+ +RH
Sbjct: 107 IAGLVEGAGQMEAMRSLQQETGAENDQQQVESLRKMLLGMVNDARVVLLKLADRVVSLRH 166
Query: 213 LDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHE 272
+ R QL + E I APLA+ + L +ELEDLSFRYL P +YL + L+
Sbjct: 167 IKDTNRETQLTFARETKNIFAPLANRLGIGQLKWELEDLSFRYLEPEAYLSIAKNLKEKR 226
Query: 273 TGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDV 332
+ ID + L + LK + + V GR K YS KK+ + EE+ DV
Sbjct: 227 VDRERYIDDVTQLLEEKLKEENIKGE------VSGRVKHIYSIWKKMTRKKVGFEEIYDV 280
Query: 333 LGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMA 392
+R++++ + CY I+ W+ +P DY+A PK NGYRS+H A
Sbjct: 281 RAVRILVERVQD-----------CYGALGIVHGEWQHIPKEFDDYVATPKENGYRSIHTA 329
Query: 393 VDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGG 431
V V GK ++EIQIRT +M + G A+H YK G
Sbjct: 330 V-VGPEGK---ILEIQIRTFQMHEESEKGIAAHWAYKEG 364
>gi|7141306|gb|AAF37282.1|AF225703_1 RSH2 [Arabidopsis thaliana]
Length = 710
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 115/335 (34%), Positives = 169/335 (50%), Gaps = 36/335 (10%)
Query: 106 SRSP-LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLH-- 162
SR P L + A+LLA++ ++ V+ AGLL V+ +S + G G A L+
Sbjct: 229 SRDPYLQHCVETAMLLANIGANSTVVVAGLLHDTVDDSFMSYDYILRNFGAGVADLVEGV 288
Query: 163 ------ESLRVKNNVNLKLQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYL 216
L +NN K D L L D RA+++ LA RL M+ L L
Sbjct: 289 SKLSQLSKLARENNTACKTVEAD-----RLHPMFLAMADARAVLIKLADRLHNMKTLYAL 343
Query: 217 PRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSK 276
+Q + E ++I APLA+ + + +LE+L F++L+P + + T L ++ +
Sbjct: 344 SPVKQQRFAKETLEIFAPLANCLGISTWKVQLENLCFKHLYPNQHNEMSTMLE--DSFDE 401
Query: 277 PLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLR 336
+I E+L Q LK A + V + GR+KS YS K+LK +E++D+ GLR
Sbjct: 402 AMITSAIEKLDQALKK----AGISYHV-LCGRHKSLYSIYSKMLKKKLTVDEIHDIHGLR 456
Query: 337 VIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVS 396
+I+ E CY ++ SLW E+P + KDYI PK NGY+SLH V
Sbjct: 457 LIVD-----------NEGDCYKALGVVHSLWSEVPGKLKDYITHPKFNGYQSLHTV--VM 503
Query: 397 DNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGG 431
DNG T PL E+QIRT+EM + A G A+H YK G
Sbjct: 504 DNG-TVPL-EVQIRTQEMHLQAEFGFAAHWRYKEG 536
>gi|398821096|ref|ZP_10579584.1| (p)ppGpp synthetase, RelA/SpoT family [Bradyrhizobium sp. YR681]
gi|398228237|gb|EJN14371.1| (p)ppGpp synthetase, RelA/SpoT family [Bradyrhizobium sp. YR681]
Length = 761
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 163/329 (49%), Gaps = 25/329 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ L VA +L DL++D I A LL +E + ++ G L+ ++K
Sbjct: 81 FSHPLEVAAILTDLKLDDATIVAALLHDTIEDTEATRAEIDQIFGPEIGALVEGLTKLKR 140
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+L + + A LRK L D +R L++ LA RL MR L+++P + I+ E
Sbjct: 141 ---LELVSREAKQAENLRKLLLAIADDVRVLLVKLADRLHNMRTLEFVPTESRRRIAEET 197
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+APLA + + ELEDLSFR L P +Y V L + ++ LI + QL
Sbjct: 198 LDIYAPLAGRMGMQEMREELEDLSFRTLDPEAYSVVMQRLDALAERNRNLIGEIEAQLSN 257
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L+ A V GR K +S K+ + E+++D+ G R++ VN
Sbjct: 258 NLRHRGLGA------RVYGRRKKPFSIWTKMERKSVGFEQLSDIFGFRLV-------VND 304
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
E ACY I+ + W +P R KDYI+ PK N YRS+H V N + +E+Q
Sbjct: 305 IE----ACYRALGIVHTTWPVVPGRFKDYISTPKQNDYRSIHTTVIGPGNQR----VELQ 356
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
IRTE MD +A G A+H FYK G+ +P E
Sbjct: 357 IRTEAMDQIAERGIAAHVFYKEGVGSPTE 385
>gi|392949030|ref|ZP_10314627.1| GTP pyrophosphokinase (p)ppGpp synthetase I [Lactobacillus pentosus
KCA1]
gi|392435748|gb|EIW13675.1| GTP pyrophosphokinase (p)ppGpp synthetase I [Lactobacillus pentosus
KCA1]
Length = 741
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 166/320 (51%), Gaps = 26/320 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD E +++G L VVE GV++ V + G A ++ ++ +
Sbjct: 41 IQVAGILAELKMDPETVASGFLHDVVEDTGVTLGDVEELFGHDVAVIVDGVTKLGK---I 97
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + ++ A RK L DIR +I+ LA RL MR L +L +Q I+ E ++I+
Sbjct: 98 RYKSNKEQLAENHRKLLLAMSKDIRVMIVKLADRLHNMRTLQHLRPDKQRRIANETLEIY 157
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+A + + + +ELED+S RYL P Y + + S + I+I + + + L
Sbjct: 158 APIADRLGISTIKWELEDISLRYLNPQQYYRIVHLMNSRREDREKYIEIAIQDIQKALH- 216
Query: 293 DATLADL-VEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEV 351
DL + + + GR K YS KK+ + ++ D+L +RV++ +
Sbjct: 217 -----DLELPEAEIYGRPKHIYSIYKKMRDKHKQFSQLYDLLAIRVVVDSIKD------- 264
Query: 352 GERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRT 411
CY I + WK MP R KDYIA PKAN Y+SLH V V GK PL EIQIRT
Sbjct: 265 ----CYAVLGAIHTQWKPMPGRFKDYIAMPKANMYQSLHTTV-VGPEGK--PL-EIQIRT 316
Query: 412 EEMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 317 FEMHRVAEYGVAAHWAYKEG 336
>gi|409997388|ref|YP_006751789.1| GTP pyrophosphokinase [Lactobacillus casei W56]
gi|406358400|emb|CCK22670.1| GTP pyrophosphokinase [Lactobacillus casei W56]
Length = 787
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 111/325 (34%), Positives = 167/325 (51%), Gaps = 25/325 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD +++G L VVE +++ + + G A ++ ++ +
Sbjct: 100 IQVAGILAELKMDPATVASGYLHDVVEDTNITLGDIEEVFGHDVAVIVDGVTKLSKVTYV 159
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ DE A RK L D+R +++ LA RL MR L +L +Q I+ E ++I+
Sbjct: 160 AHK---DELAENHRKMLLAMAKDLRVIMVKLADRLHNMRTLQHLRPDKQRRIANETLEIY 216
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + + +ELEDLS RYL P Y + + S T + I +++
Sbjct: 217 APLADRLGISTIKWELEDLSLRYLNPQQYYRIAHLMNSKRTEREAYIQEAIDEI------ 270
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ LADL + GR K YS KK+ + +E+ D+L +RVI + +
Sbjct: 271 EKALADLHIKYEIYGRPKHIYSIYKKMRDKHKQFDELYDLLAIRVITETIKD-------- 322
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKAN Y+S+H V + GK PL E+QIRTE
Sbjct: 323 ---CYAVLGAIHTKWKPMPGRFKDYIAMPKANLYQSIHTTV-IGPMGK--PL-EVQIRTE 375
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEE 437
EM +A G A+H YK G T+ E
Sbjct: 376 EMHHVAEYGVAAHWAYKEGQTSKVE 400
>gi|418936970|ref|ZP_13490644.1| (p)ppGpp synthetase I, SpoT/RelA [Rhizobium sp. PDO1-076]
gi|375056312|gb|EHS52513.1| (p)ppGpp synthetase I, SpoT/RelA [Rhizobium sp. PDO1-076]
Length = 742
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 162/323 (50%), Gaps = 24/323 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ L VA +L D+++D I+ LL +E + ++ + G L+ ++K
Sbjct: 46 ISHPLEVAAILTDMRLDESTIAVALLHDTIEDTSATRAEIDELFGEDIGRLVEGLTKLKK 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L L + A LRK L D +R L++ LA RL MR L+++ ++ IS E
Sbjct: 106 ---LDLVSKKAKQAENLRKLLLAISDDVRVLLVKLADRLHNMRTLEHMRDDKRARISEET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLA + + ELEDLSFRY+ P +Y V L T ++ LI +++L
Sbjct: 163 MEIYAPLAGRMGMQDMRDELEDLSFRYINPEAYETVTQRLAELSTRNEGLITKIEDELRD 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L + L + SV+GR K YS +K+ E+++DV G R+++
Sbjct: 223 LLVANGLL-----NTSVKGRQKRPYSVFRKMQSKSLSFEQLSDVYGFRILVDDIP----- 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY I+ + W+ +P R KDYI+ PK N YRS+H + G +R +E+Q
Sbjct: 273 ------GCYRALGIVHTRWRVVPGRFKDYISTPKQNDYRSIHTTI----VGPSRQRIELQ 322
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IRT M +A G A+HA YK G
Sbjct: 323 IRTSRMHEIAEFGIAAHALYKDG 345
>gi|227534968|ref|ZP_03965017.1| GTP pyrophosphokinase [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|239631387|ref|ZP_04674418.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus paracasei subsp. paracasei 8700:2]
gi|301066581|ref|YP_003788604.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus casei str. Zhang]
gi|417980818|ref|ZP_12621497.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
12A]
gi|417986894|ref|ZP_12627458.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
32G]
gi|417999269|ref|ZP_12639480.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
T71499]
gi|418002217|ref|ZP_12642339.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
UCD174]
gi|418008131|ref|ZP_12648000.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
UW4]
gi|418010975|ref|ZP_12650746.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
Lc-10]
gi|227187425|gb|EEI67492.1| GTP pyrophosphokinase [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|239525852|gb|EEQ64853.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus paracasei subsp. paracasei 8700:2]
gi|300438988|gb|ADK18754.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus casei str. Zhang]
gi|410524265|gb|EKP99178.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
32G]
gi|410524329|gb|EKP99241.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
12A]
gi|410539545|gb|EKQ14073.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
T71499]
gi|410544645|gb|EKQ18966.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
UCD174]
gi|410547359|gb|EKQ21594.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
UW4]
gi|410553554|gb|EKQ27557.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
Lc-10]
Length = 742
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 111/325 (34%), Positives = 167/325 (51%), Gaps = 25/325 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD +++G L VVE +++ + + G A ++ ++ +
Sbjct: 55 IQVAGILAELKMDPATVASGYLHDVVEDTNITLGDIEEVFGHDVAVIVDGVTKLSKVTYV 114
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ DE A RK L D+R +++ LA RL MR L +L +Q I+ E ++I+
Sbjct: 115 AHK---DELAENHRKMLLAMAKDLRVIMVKLADRLHNMRTLQHLRPDKQRRIANETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + + +ELEDLS RYL P Y + + S T + I +++
Sbjct: 172 APLADRLGISTIKWELEDLSLRYLNPQQYYRIAHLMNSKRTEREAYIQEAIDEI------ 225
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ LADL + GR K YS KK+ + +E+ D+L +RVI + +
Sbjct: 226 EKALADLHIKYEIYGRPKHIYSIYKKMRDKHKQFDELYDLLAIRVITETIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKAN Y+S+H V + GK PL E+QIRTE
Sbjct: 278 ---CYAVLGAIHTKWKPMPGRFKDYIAMPKANLYQSIHTTV-IGPMGK--PL-EVQIRTE 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEE 437
EM +A G A+H YK G T+ E
Sbjct: 331 EMHHVAEYGVAAHWAYKEGQTSKVE 355
>gi|330504040|ref|YP_004380909.1| (p)ppGpp synthetase I [Pseudomonas mendocina NK-01]
gi|328918326|gb|AEB59157.1| (p)ppGpp synthetase I [Pseudomonas mendocina NK-01]
Length = 747
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 162/329 (49%), Gaps = 27/329 (8%)
Query: 108 SPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLR- 166
S L +A +LADL++D + + A ++ + V G +++ V R G A L+ LR
Sbjct: 63 STFRAGLDIAEILADLKLDQDSLVAAIIYRGVREGKITLAAVHQRFGPVVAKLIEGVLRM 122
Query: 167 --VKNNVNLKLQVL--DDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQ 221
+ ++N + V+ LRK + D +R ++ LA R +R + ++
Sbjct: 123 AAISASINPRESVVVGSQTQVENLRKMLVAMVDDVRVALIKLAERTCAIRAVKEADEEKR 182
Query: 222 LMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDI 281
++ EV I+APLAH + ++ +ELEDLSFRYL P Y + L + I+
Sbjct: 183 QRVAREVFDIYAPLAHRLGIGHIKWELEDLSFRYLEPDQYKQIAKLLHERRLDREQYIND 242
Query: 282 YKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKP 341
L Q L+ AD + GR K YS +K+ + G ++ DV +RV++
Sbjct: 243 AMAHLRQELEATGIKAD------ISGRAKHIYSIWRKMQRKGLQFSQIYDVRAVRVLV-- 294
Query: 342 SSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKT 401
EV R CYTT I+ +LW+ +P DYIA PK NGYRSLH AV + GK
Sbjct: 295 -------PEV--RDCYTTLGIVHTLWRHIPKEFDDYIANPKENGYRSLHTAV-LGPEGK- 343
Query: 402 RPLMEIQIRTEEMDMLAVNGTASHAFYKG 430
++E+QIRT M A G +H YKG
Sbjct: 344 --VLEVQIRTHSMHEEAELGVCAHWRYKG 370
>gi|294101598|ref|YP_003553456.1| (p)ppGpp synthetase I SpoT/RelA [Aminobacterium colombiense DSM
12261]
gi|293616578|gb|ADE56732.1| (p)ppGpp synthetase I, SpoT/RelA [Aminobacterium colombiense DSM
12261]
Length = 734
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/323 (33%), Positives = 166/323 (51%), Gaps = 25/323 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ +++VA +LAD+Q+D + A LL V+E +S ++V+ G L+ ++
Sbjct: 64 VVHSINVASILADMQLDLVTLIAALLHDVLEDTALSAEKVKSAFGDDVITLVDGVTKLGK 123
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L + +D A LRK F + DIR +++ LA RL MR L L R +QL I+ E
Sbjct: 124 ---LPFKSFEDYQAENLRKMFVVMAKDIRVVLIKLADRLHNMRTLGALRRDKQLRIAKET 180
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+APLAH + + LEDL+F+Y P Y + +R + +I E L
Sbjct: 181 LEIYAPLAHRLGIYQVKRGLEDLAFKYSDPDMYYEIRRRVRKKLPEREAIIKKAIEILQD 240
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
LK ++ V+GR K YS +K+ + E++ D+L LRV++ +
Sbjct: 241 RLKQESI------HFKVKGRAKHFYSIYEKMNRKKLPVEQLYDLLALRVVVDDVA----- 289
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
ACYT I+ ++WK +P + DYIA PK N Y+SLH V G T +E+Q
Sbjct: 290 ------ACYTVLGIVHTIWKPIPGQFDDYIANPKTNMYQSLHTTV----VGPTGEPLEVQ 339
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IR+ EM+ LA G A+H YK G
Sbjct: 340 IRSAEMNRLAEYGIAAHWRYKEG 362
>gi|148550411|ref|YP_001270513.1| (p)ppGpp synthetase I SpoT/RelA [Pseudomonas putida F1]
gi|395446252|ref|YP_006386505.1| ppGpp synthetase I SpoT/RelA [Pseudomonas putida ND6]
gi|421523241|ref|ZP_15969872.1| (p)ppGpp synthetase I SpoT/RelA [Pseudomonas putida LS46]
gi|148514469|gb|ABQ81329.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudomonas putida F1]
gi|388560249|gb|AFK69390.1| ppGpp synthetase I SpoT/RelA [Pseudomonas putida ND6]
gi|402753062|gb|EJX13565.1| (p)ppGpp synthetase I SpoT/RelA [Pseudomonas putida LS46]
Length = 702
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 159/321 (49%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + + + G A L+ V
Sbjct: 46 VTHPLAVASILADMHMDHQSLMAAMLHDVIEDTGIAKEALSQQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ + P + ++S K ++ + L
Sbjct: 163 LEIYAPIANRLGMHTVRVEFEDLGFKAMHPMRSSLIHRAVKSARGNRKEIVAKIEHSLAN 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D + V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLSADGIEGE------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|331002004|ref|ZP_08325524.1| hypothetical protein HMPREF0491_00386 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330411800|gb|EGG91205.1| hypothetical protein HMPREF0491_00386 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 762
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 169/322 (52%), Gaps = 34/322 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLH-----ESLRVK 168
+ VA++LA+L++D E I+AGLL V+E +S +++ D G+ A+L+ L +K
Sbjct: 76 ICVAIILAELELDKETIAAGLLHDVIEDTAISFEELSDMFGVDVANLVDGVTKLTQLSLK 135
Query: 169 NNVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLE 227
N+ +++Q A LRK F DIR +++ LA RL MR L Y+ +Q + E
Sbjct: 136 ND-KIEMQ------AENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMKPEKQKEKARE 188
Query: 228 VMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLL 287
M I++P+A + + + EL+DLS +YL P Y + L + + +D +++
Sbjct: 189 TMDIYSPIAQRLGISKIKVELDDLSLKYLHPDVYYDLSEKLAFRKEQRQQFVD----EII 244
Query: 288 QCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVN 347
+ + ++ + + GR K +S KK++ + +++ DV +R+I++ +
Sbjct: 245 KKINEHLSVTGI--KYQINGRVKHLFSIYKKMVNQNKTLDQIYDVFAIRIIVEDVA---- 298
Query: 348 TSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEI 407
ACY + ++K +P R KDYIA PK N Y+SLH + +SD G+ E+
Sbjct: 299 -------ACYLALGTVHEIYKPIPGRFKDYIAMPKQNMYQSLHTTL-ISDTGQP---FEV 347
Query: 408 QIRTEEMDMLAVNGTASHAFYK 429
QIRT EM A G A+H YK
Sbjct: 348 QIRTYEMHKTAEFGIAAHWKYK 369
>gi|328543518|ref|YP_004303627.1| GTP pyrophosphokinase [Polymorphum gilvum SL003B-26A1]
gi|326413262|gb|ADZ70325.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (PpGpp
synthetase I) ((P)ppGpp synthetase) [Polymorphum gilvum
SL003B-26A1]
Length = 735
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 164/333 (49%), Gaps = 25/333 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ L VA +L DL++D I+ LL +E + ++ G L+ ++K
Sbjct: 46 FSHPLEVAAILTDLRLDEATIAVALLHDTIEDTDATRSEIDTVFGEEIGKLVEGLTKIKR 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L L + A RK L D +R L++ LA RL MR L ++P +++ I+ E
Sbjct: 106 ---LDLVSQKAKQAENFRKLLLAIADDVRVLLVKLADRLHNMRTLQHMPEHKRGRIAEET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLA + + ELED++FR L P ++ + L + +K LI +E L
Sbjct: 163 MEIYAPLAGRMGMQDMREELEDIAFRTLNPEAFDTIAERLETLRARNKGLIAEIEETLT- 221
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
A LA+ V+GR K YS +K+ + E+++D+ G RVI V T
Sbjct: 222 -----ARLAERGIAAIVKGREKRPYSIFRKMQQKSLGFEQLSDIYGFRVI-------VGT 269
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
E ACY +I + W +P R KDYI+ PK N YRS+H + G +R +E+Q
Sbjct: 270 VE----ACYRVLGVIHTTWSTVPGRFKDYISTPKQNDYRSIHTTI----VGPSRQRVELQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRL 441
IRT+ MD +A G A+HA YK G RL
Sbjct: 322 IRTQAMDRVAEYGIAAHALYKDGEMGGRNIARL 354
>gi|300690930|ref|YP_003751925.1| bifunctional (p)ppGpp synthetase II/guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Ralstonia
solanacearum PSI07]
gi|299077990|emb|CBJ50631.1| putative bifunctional: (p)ppGpp synthetase II; guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase; precursor (spoT)
[Ralstonia solanacearum PSI07]
Length = 853
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 191/395 (48%), Gaps = 32/395 (8%)
Query: 48 SPAPLPSTAGEKMVVKLVGAFNELTERMNVLSSSSSRLLFKALKLSIPMLQSLPLSPDSR 107
P P+ + VV + G LTE+++ L + +L+ +A S L S
Sbjct: 121 GPTSQPAAPPRQQVVSIAG----LTEKLSYLKPADMKLVKEAFHFSDEA--HLGQYRQSG 174
Query: 108 SP-LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLR 166
P +T ++VA + A ++D + I A LL V+E GV+ ++ ++ G A L+ +
Sbjct: 175 EPYITHPVAVAEICAGWKLDVQSIMAALLHDVIEDQGVTKSELAEKFGPKVAELVDGLTK 234
Query: 167 VKNNVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMIS 225
+ L+ Q + A + RK L D+R +++ LA R MR LD++P ++ I+
Sbjct: 235 LDK---LEFQSREQAQAESFRKMLLAMARDVRVILVKLADRTHNMRTLDHVPPEKRRRIA 291
Query: 226 LEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQ 285
E M+I+AP+AH + N EL++LSFR F Y ++ +++ + ++ E
Sbjct: 292 GETMEIYAPIAHRLGLNTTYRELQELSFRIGSSFRYATLEKAVKAARGNRREVVSRILEA 351
Query: 286 LLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNL 345
+ L A+L GR K+ YS +K+ +V DV G RV+++
Sbjct: 352 AQRALGDAGIPAELT------GREKTLYSIYRKMHDKQLSFSQVLDVYGFRVVVE----- 400
Query: 346 VNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLM 405
+ CY + SL+K MP + KDYIA PK NGY+SLH + V G +
Sbjct: 401 ------TQMQCYMAVGALHSLYKPMPGKFKDYIAIPKINGYQSLHTTL-VGPFGTP---V 450
Query: 406 EIQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKR 440
E QIRT EM+ +A G A+H YK P+ A++
Sbjct: 451 EFQIRTREMNQIAEAGVAAHWMYKQHHDEPDRAQQ 485
>gi|448821490|ref|YP_007414652.1| GTP pyrophosphokinase / pyrophosphohydrolase [Lactobacillus
plantarum ZJ316]
gi|448274987|gb|AGE39506.1| GTP pyrophosphokinase / pyrophosphohydrolase [Lactobacillus
plantarum ZJ316]
Length = 741
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 166/320 (51%), Gaps = 26/320 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD E +++G L VVE GV++ V + G A ++ ++ +
Sbjct: 41 IQVAGILAELKMDPETVASGFLHDVVEDTGVTLGDVEELFGHDVAVIVDGVTKLGK---I 97
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + ++ A RK L DIR +I+ LA RL MR L +L +Q I+ E ++I+
Sbjct: 98 RYKSNKEQLAENHRKLLLAMSKDIRVMIVKLADRLHNMRTLQHLRPDKQRRIANETLEIY 157
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+A + + + +ELED+S RYL P Y + + S + I+I + + + L
Sbjct: 158 APIADRLGISTIKWELEDISLRYLNPQQYYRIVHLMNSRREDREKYIEIAIQDIQKALH- 216
Query: 293 DATLADL-VEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEV 351
DL + + + GR K YS KK+ + ++ D+L +RV++ +
Sbjct: 217 -----DLELPEAEIYGRPKHIYSIYKKMRDKHKQFSQLYDLLAIRVVVDSIKD------- 264
Query: 352 GERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRT 411
CY I + WK MP R KDYIA PKAN Y+SLH V V GK PL EIQIRT
Sbjct: 265 ----CYAVLGAIHTQWKPMPGRFKDYIAMPKANMYQSLHTTV-VGPEGK--PL-EIQIRT 316
Query: 412 EEMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 317 FEMHRVAEYGVAAHWAYKEG 336
>gi|27380176|ref|NP_771705.1| GTP pyrophosphokinase [Bradyrhizobium japonicum USDA 110]
gi|27353330|dbj|BAC50330.1| GTP pyrophosphokinase [Bradyrhizobium japonicum USDA 110]
Length = 762
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 111/329 (33%), Positives = 161/329 (48%), Gaps = 25/329 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ L VA +L DL++D I A LL +E + ++ G L+ ++K
Sbjct: 81 FSHPLEVAAILTDLKLDDATIVAALLHDTIEDTEATRAEIDQIFGPEIGALVEGLTKLKR 140
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+L + + A LRK L D +R L++ LA RL MR L+++P + I+ E
Sbjct: 141 ---LELVSREAKQAENLRKLLLAIADDVRVLLVKLADRLHNMRTLEFVPPESRRRIAEET 197
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+APLA + + ELEDLSFR L P +Y V L + ++ LI + QL
Sbjct: 198 LDIYAPLAGRMGMQEMREELEDLSFRTLDPEAYSVVMQRLDALAERNRNLIGEIEAQLSN 257
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L+ A V GR K +S K+ + E+++D+ G RV+ VN
Sbjct: 258 NLRHRGLGA------RVYGRRKKPFSIWTKMERKSVGFEQLSDIFGFRVV-------VND 304
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
E ACY I+ + W +P R KDYI+ PK N YRS+H V N + E+Q
Sbjct: 305 IE----ACYRALGIVHTTWPVVPGRFKDYISTPKQNDYRSIHTTVIGPGNQRA----ELQ 356
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
IRTE MD +A G A+H FYK G +P E
Sbjct: 357 IRTEAMDQIAERGIAAHVFYKEGAGSPTE 385
>gi|422933491|ref|ZP_16966411.1| GTP diphosphokinase [Fusobacterium nucleatum subsp. animalis ATCC
51191]
gi|339891612|gb|EGQ80570.1| GTP diphosphokinase [Fusobacterium nucleatum subsp. animalis ATCC
51191]
Length = 552
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 106/320 (33%), Positives = 171/320 (53%), Gaps = 33/320 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L D++MD + I AGLL VVE + I ++ G A L+ + V
Sbjct: 50 VEVAKILMDMKMDTDTIVAGLLHDVVEDTLIPIADIKYNFGDTVATLV-------DGVT- 101
Query: 174 KLQVLDDET---AAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVM 229
KL+ L + T A +RK L +IR +++ LA RL MR L ++ +Q IS E +
Sbjct: 102 KLKALPNGTKNQAENIRKMILAMAENIRVILIKLADRLHNMRTLKFMKPEKQQSISKETL 161
Query: 230 KIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQC 289
I+APLAH + + ELED++F YL +L + + + + K I+ + +++
Sbjct: 162 DIYAPLAHRLGMAKVKSELEDIAFSYLHHDEFLEIKRLVDNTKEERKDYIENFIRTMIR- 220
Query: 290 LKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTS 349
TL++L V+GR+K YS +K+ + G+ +++ D++G+RVI++ +
Sbjct: 221 -----TLSELGIKAEVKGRFKHFYSIYRKMYQKGKDFDDIYDLMGVRVIVEDKA------ 269
Query: 350 EVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQI 409
CY I+ S + +P R KDYIA PK+N Y+S+H + V GK +EIQI
Sbjct: 270 -----TCYHVLGIVHSQYTPVPGRFKDYIAVPKSNNYQSIHTTI-VGPLGK---FIEIQI 320
Query: 410 RTEEMDMLAVNGTASHAFYK 429
RT++MD +A G A+H YK
Sbjct: 321 RTKDMDDIAEEGIAAHWNYK 340
>gi|410663229|ref|YP_006915600.1| GTP pyrophosphokinase [Simiduia agarivorans SA1 = DSM 21679]
gi|409025586|gb|AFU97870.1| GTP pyrophosphokinase [Simiduia agarivorans SA1 = DSM 21679]
Length = 748
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 171/339 (50%), Gaps = 30/339 (8%)
Query: 108 SPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRV 167
S L +A +LADL +D E + A +L + V G +S+ +V G + L+ LR+
Sbjct: 65 SSFRTGLEMAEILADLNLDNESLIAAILYRAVREGKLSLDRVAKAFGNTISKLIEGVLRM 124
Query: 168 KN------NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQ 220
+ ++ L +E A +RK + D +R ++ LA R +R L +
Sbjct: 125 AAISATQLDESIALGRESEEQAENVRKMLVAMVDDVRVALIKLAERTCAIRALKTATEER 184
Query: 221 QLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLID 280
+ ++ E+ ++APLAH + ++ +ELEDLSFRYL P Y+ + L G + ID
Sbjct: 185 RQRVAKEIANVYAPLAHRLGIGHIKWELEDLSFRYLEPDDYMTIARLLDEKRMGRQQYID 244
Query: 281 IYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIK 340
+L+ L+ + A + +++ GR K YS +K+ + +V D+ +R+++
Sbjct: 245 ----NVLEVLRGELKSAHIEGEIT--GRAKHIYSIWRKMRRKNIGFSQVYDIRAVRILV- 297
Query: 341 PSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGK 400
PS R CY I+ SLW+ +P+ DYIA PK NGYRSLH AV G
Sbjct: 298 PSV----------RDCYAVLGIVHSLWRNIPNEFDDYIASPKENGYRSLHTAVI----GP 343
Query: 401 TRPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAK 439
+ ++E+QIRT M A G +H YKG T+ EE++
Sbjct: 344 EQKVLEVQIRTHGMHQDAEFGVCAHWRYKG--TDKEESQ 380
>gi|418275522|ref|ZP_12890845.1| GTP pyrophosphokinase / pyrophosphohydrolase [Lactobacillus
plantarum subsp. plantarum NC8]
gi|376009073|gb|EHS82402.1| GTP pyrophosphokinase / pyrophosphohydrolase [Lactobacillus
plantarum subsp. plantarum NC8]
Length = 755
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 166/320 (51%), Gaps = 26/320 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD E +++G L VVE GV++ V + G A ++ ++ +
Sbjct: 55 IQVAGILAELKMDPETVASGFLHDVVEDTGVTLGDVEELFGHDVAVIVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + ++ A RK L DIR +I+ LA RL MR L +L +Q I+ E ++I+
Sbjct: 112 RYKSNKEQLAENHRKLLLAMSKDIRVMIVKLADRLHNMRTLQHLRPDKQRRIANETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+A + + + +ELED+S RYL P Y + + S + I+I + + + L
Sbjct: 172 APIADRLGISTIKWELEDISLRYLNPQQYYRIVHLMNSRREDREKYIEIAIQDIQKALH- 230
Query: 293 DATLADL-VEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEV 351
DL + + + GR K YS KK+ + ++ D+L +RV++ +
Sbjct: 231 -----DLELPEAEIYGRPKHIYSIYKKMRDKHKQFSQLYDLLAIRVVVDSIKD------- 278
Query: 352 GERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRT 411
CY I + WK MP R KDYIA PKAN Y+SLH V V GK PL EIQIRT
Sbjct: 279 ----CYAVLGAIHTQWKPMPGRFKDYIAMPKANMYQSLHTTV-VGPEGK--PL-EIQIRT 330
Query: 412 EEMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 331 FEMHRVAEYGVAAHWAYKEG 350
>gi|191638527|ref|YP_001987693.1| GTP pyrophosphokinase [Lactobacillus casei BL23]
gi|385820236|ref|YP_005856623.1| GTP pyrophosphokinase [Lactobacillus casei LC2W]
gi|385823433|ref|YP_005859775.1| GTP pyrophosphokinase [Lactobacillus casei BD-II]
gi|418005247|ref|ZP_12645243.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
UW1]
gi|190712829|emb|CAQ66835.1| GTP pyrophosphokinase [Lactobacillus casei BL23]
gi|327382563|gb|AEA54039.1| GTP pyrophosphokinase [Lactobacillus casei LC2W]
gi|327385760|gb|AEA57234.1| GTP pyrophosphokinase [Lactobacillus casei BD-II]
gi|410547500|gb|EKQ21733.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
UW1]
Length = 742
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 111/325 (34%), Positives = 167/325 (51%), Gaps = 25/325 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD +++G L VVE +++ + + G A ++ ++ +
Sbjct: 55 IQVAGILAELKMDPATVASGYLHDVVEDTNITLGDIEEVFGHDVAVIVDGVTKLSKVTYV 114
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ DE A RK L D+R +++ LA RL MR L +L +Q I+ E ++I+
Sbjct: 115 AHK---DELAENHRKMLLAMAKDLRVIMVKLADRLHNMRTLQHLRPDKQRRIANETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + + +ELEDLS RYL P Y + + S T + I +++
Sbjct: 172 APLADRLGISTIKWELEDLSLRYLNPQQYYRIAHLMNSKRTEREAYIQEAIDEI------ 225
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ LADL + GR K YS KK+ + +E+ D+L +RVI + +
Sbjct: 226 EKALADLHIKYEIYGRPKHIYSIYKKMRDKHKQFDELYDLLAIRVITETIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKAN Y+S+H V + GK PL E+QIRTE
Sbjct: 278 ---CYAVLGAIHTKWKPMPGRFKDYIAMPKANLYQSIHTTV-IGPMGK--PL-EVQIRTE 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEE 437
EM +A G A+H YK G T+ E
Sbjct: 331 EMHHVAEYGVAAHWAYKEGQTSKVE 355
>gi|253997766|ref|YP_003049829.1| (p)ppGpp synthetase I SpoT/RelA [Methylovorus glucosetrophus
SIP3-4]
gi|313199830|ref|YP_004038488.1| (p)ppGpp synthetase I SpoT/RelA [Methylovorus sp. MP688]
gi|253984445|gb|ACT49302.1| (p)ppGpp synthetase I, SpoT/RelA [Methylovorus glucosetrophus
SIP3-4]
gi|312439146|gb|ADQ83252.1| (p)ppGpp synthetase I, SpoT/RelA [Methylovorus sp. MP688]
Length = 740
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 178/361 (49%), Gaps = 27/361 (7%)
Query: 71 LTERMNV-LSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMDAEV 129
LT+R+ V L ++ A + S M + L +T +SVA +LA+L MD
Sbjct: 30 LTQRLRVYLKPEDIEQVWAAYRFS-DMAHTGQLRKSGEPYITHPVSVACILAELHMDVPT 88
Query: 130 ISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRKF 189
+ A LL VVE GV+ Q+V +R G A L+ ++ +K + A RK
Sbjct: 89 LVAALLHDVVEDTGVTTQEVSERFGKQVAELVDGLSKLDK---IKFSTETEAQAENFRKM 145
Query: 190 CLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFEL 248
L D+R +++ LA RL M L + ++ + E ++I+AP+A+ + N + EL
Sbjct: 146 LLAMSQDVRVILVKLADRLHNMSTLGVMTPEKRRRTARETLEIYAPIANRLGLNAIYQEL 205
Query: 249 EDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGR 308
EDLSF++L+P Y + + + K ++ ++L ++ L ++ + V GR
Sbjct: 206 EDLSFKHLYPMRYSVISKAILAARGNRKEVVG----KILDAIRE--RLGEMHIEAEVTGR 259
Query: 309 YKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWK 368
K YS +K+ ++ D+ G R+I+K S +CY ++ L+K
Sbjct: 260 EKHLYSIYRKMTGKTVTFSQIYDIYGFRIIVKDLS-----------SCYLALGVLHGLYK 308
Query: 369 EMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFY 428
+P + KDYIA PKANGY+SLH + G +E+QIR+ EM +A G A+H Y
Sbjct: 309 PIPGKFKDYIAIPKANGYQSLHTTL----FGPFGTPIEVQIRSREMHNIADAGVAAHWLY 364
Query: 429 K 429
K
Sbjct: 365 K 365
>gi|116495022|ref|YP_806756.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus casei ATCC 334]
gi|116105172|gb|ABJ70314.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus casei ATCC 334]
Length = 742
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 111/325 (34%), Positives = 167/325 (51%), Gaps = 25/325 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD +++G L VVE +++ + + G A ++ ++ +
Sbjct: 55 IQVAGILAELKMDPATVASGYLHDVVEDTNITLGDIEEVFGHDVAVIVDGVTKLSKVTYV 114
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ DE A RK L D+R +++ LA RL MR L +L +Q I+ E ++I+
Sbjct: 115 AHK---DELAENHRKMLLAMAKDLRVIMVKLADRLHNMRTLQHLRPDKQRRIANETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + + +ELEDLS RYL P Y + + S T + I +++
Sbjct: 172 APLADRLGISTIKWELEDLSLRYLNPQQYYRIAHLMNSKRTEREAYIQEAIDEI------ 225
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ LADL + GR K YS KK+ + +E+ D+L +RVI + +
Sbjct: 226 EKALADLHIKYEIYGRPKHIYSIYKKMRDKHKQFDELYDLLAIRVITETIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKAN Y+S+H V + GK PL E+QIRTE
Sbjct: 278 ---CYAVLGAIHTKWKPMPGRFKDYIAMPKANLYQSIHTTV-IGPMGK--PL-EVQIRTE 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEE 437
EM +A G A+H YK G T+ E
Sbjct: 331 EMHHVAEYGVAAHWAYKEGQTSKVE 355
>gi|359412257|ref|ZP_09204722.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium sp. DL-VIII]
gi|357171141|gb|EHI99315.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium sp. DL-VIII]
Length = 736
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 111/341 (32%), Positives = 168/341 (49%), Gaps = 44/341 (12%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
++VA +LA+L MD I AGLL V+E S + + A L+ ++ +
Sbjct: 48 IAVAEILAELGMDTNTIVAGLLHDVIEDTDCSYDETVNLFNAEIADLVDGVTKLTKLGEM 107
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A +RK L DIR +I+ LA RL MR L ++P +Q + E + I+
Sbjct: 108 EYKTKEEQQADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKFMPEKKQKNKAKETLDIY 167
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELEDL FRYL HE L+D E+ ++
Sbjct: 168 APLAHRLGMSKIKWELEDLCFRYL--------------HEKEYYELVDSIAEKRVE---R 210
Query: 293 DATLADLVEDVS-----------VQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKP 341
+ + D+V D+ + GR K YS KK++ + E++ D+ +RV
Sbjct: 211 ETYIKDIVSDLEEKLEAAGIQSDIDGRPKHFYSIYKKMVSKNKSIEQIFDLTAIRV---- 266
Query: 342 SSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKT 401
LVN+ + CY I+ ++++ +P R KDYIA PK N Y+SLH V + GKT
Sbjct: 267 ---LVNSV----KDCYGVLGIVHTIYRPIPGRFKDYIAMPKPNMYQSLHTTV-IGPQGKT 318
Query: 402 RPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLK 442
EIQIRT EM A G A+H YK G T E + K
Sbjct: 319 ---FEIQIRTFEMHKTAEYGIAAHWKYKEGDTAKGEQDKQK 356
>gi|13476436|ref|NP_108006.1| GTP pyrophosphokinase [Mesorhizobium loti MAFF303099]
gi|14027197|dbj|BAB54151.1| GTP pyrophosphokinase [Mesorhizobium loti MAFF303099]
Length = 742
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 162/329 (49%), Gaps = 29/329 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ L VA +L ++ MD I+ LL +E + ++ D G L+ ++K
Sbjct: 46 FSHPLEVAAILTEMHMDEATIAVALLHDTIEDTTATRAEIDDLFGPEMGKLVEGLTKLKK 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L L E A LRK L D+R L++ LA RL MR LD++P ++L I+ E
Sbjct: 106 ---LDLVSKKAEQAENLRKLLLAISEDVRVLLVKLADRLHNMRTLDHMPEAKRLRIAEET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRS-HETGSKPLIDIYKEQLL 287
M I+APLA + + ELE+++FRY+ P +Y V L E L DI E+ L
Sbjct: 163 MDIYAPLAGRMGMQGMREELEEIAFRYINPEAYRAVTARLAEIFERNKGVLTDI--EKAL 220
Query: 288 QCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVN 347
L + + V+ R K +S +K+ E+++D+ G RV+ V+
Sbjct: 221 SALFEKHAI-----NAGVKSRQKKPWSVFRKMEAKALSFEQLSDIFGFRVV-------VD 268
Query: 348 TSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEI 407
T E CY I + W +P R KDYI+ PK N YRS+H + G +R +E+
Sbjct: 269 TVE----DCYRALGAIHTTWSMVPGRFKDYISTPKQNDYRSIHTTI----VGPSRQRVEL 320
Query: 408 QIRTEEMDMLAVNGTASHAFYK--GGLTN 434
QIRT EM+ +A G A+H+ YK GG TN
Sbjct: 321 QIRTREMNKIAEYGVAAHSIYKDTGGKTN 349
>gi|417753006|ref|ZP_12401162.1| GTP diphosphokinase [Streptococcus dysgalactiae subsp. equisimilis
SK1249]
gi|333771103|gb|EGL48067.1| GTP diphosphokinase [Streptococcus dysgalactiae subsp. equisimilis
SK1249]
Length = 739
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 173/347 (49%), Gaps = 26/347 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +LADL +DA ++ G L VVE +++ + G ++ ++
Sbjct: 51 IVHPIQVAGILADLHLDAVTVACGFLHDVVEDTDITLDNIEFDFGKDVRDIVDGVTKLGK 110
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E
Sbjct: 111 ---VEYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRET 167
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLAH + + + +ELEDL+FRYL + + + + L+D ++
Sbjct: 168 MEIYAPLAHRLGISRIKWELEDLAFRYLNETEFYKISHMMNEKRREREALVD----DIVT 223
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+K+ T L D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 224 KIKSYTTEQRLFGD--VYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCVMETQSDV--- 278
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQ
Sbjct: 279 --------YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQ 325
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALR 455
IRT+EM +A G A+H YK G+ K M EL L+
Sbjct: 326 IRTKEMHQVAEYGVAAHWAYKKGVRGKVNQAEQKVGMNWIKELVELQ 372
>gi|332298737|ref|YP_004440659.1| (p)ppGpp synthetase I SpoT/RelA [Treponema brennaborense DSM 12168]
gi|332181840|gb|AEE17528.1| (p)ppGpp synthetase I, SpoT/RelA [Treponema brennaborense DSM
12168]
Length = 615
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 114/325 (35%), Positives = 169/325 (52%), Gaps = 27/325 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+ ++DA+ I AG L V+ V V R G ++ + ++ NL
Sbjct: 64 MRVACILAESRLDADTIVAGFLHNVLSLETVDPADVESRFGSAVFRIISGTAKI---TNL 120
Query: 174 KLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K+Q A ++RK D IR +++ LA RLD MR+L + Q +I+ EV+ I
Sbjct: 121 KIQKKTLHQADSIRKMLFAMIDDIRVILVKLADRLDRMRNLSSVEPDVQKLIAQEVIDIW 180
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA+ + + + ELEDLS ++ P Y L+S K Y E+ + +
Sbjct: 181 APLANRLGMSSVKSELEDLSLKFTNPDVY----AQLKSIVALKKNERSDYLEKAQKEIYR 236
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
A+ A + +++V R K YS +K+ K + +E+ D+L LRVI S+
Sbjct: 237 AASRAGI--EIAVSSRAKHFYSIYQKMRKRNKAADELFDLLALRVICNTSAE-------- 286
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CYT ++ +LWK + R KDYIA PKANGY+SLH V + PL EIQIRT+
Sbjct: 287 ---CYTLVGLVHNLWKPLDGRFKDYIAMPKANGYQSLHTTVLC----EGMPL-EIQIRTK 338
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEE 437
+M +A G ASH YK G TN +E
Sbjct: 339 DMHSVAEYGVASHWLYKKG-TNHDE 362
>gi|357636371|ref|ZP_09134246.1| RelA/SpoT family protein [Streptococcus macacae NCTC 11558]
gi|357584825|gb|EHJ52028.1| RelA/SpoT family protein [Streptococcus macacae NCTC 11558]
Length = 740
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 178/356 (50%), Gaps = 27/356 (7%)
Query: 78 LSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQ 137
+++S + KAL + S L + + VA +LADL +DA +S G L
Sbjct: 20 MNASDVAFVEKALDYA-QQCHSGQLRKSGEPYIIHPIQVAGILADLHLDAITVSCGFLHD 78
Query: 138 VVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRKFCLTYY-DI 196
VVE ++ + ++ G +++ ++ ++ + ++ A RK + DI
Sbjct: 79 VVEDTEATLDDLEEKFGTDVRNIVDGVTKLGK---VEYKSHQEQLAENHRKMLMAMSRDI 135
Query: 197 RALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYL 256
R +++ LA RL MR L +L + +Q IS E M+I+APLAH + + + +ELEDL+FRYL
Sbjct: 136 RVILVKLADRLHNMRTLRHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDLAFRYL 195
Query: 257 FPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTM 316
+ + ++ + L+D +++ + + + + + GR K YS
Sbjct: 196 NEVEFYKISRLMKEKRREREALVDEIVKKIKEYTEEQSLYGE------IYGRPKHIYSIY 249
Query: 317 KKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKD 376
+K+ + +++ D++ +R I+ S++ Y I LW+ MP R KD
Sbjct: 250 RKMRDKKKRFDQIYDLIAIRCILDTPSDV-----------YAMLGYIHELWRPMPGRFKD 298
Query: 377 YIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGGL 432
YIA PKANGY+S+H V G P+ E+QIRT+EM +A G A+H YK G+
Sbjct: 299 YIANPKANGYQSIHTTV----YGPKGPI-EVQIRTKEMHQVAEYGVAAHWAYKKGI 349
>gi|421897813|ref|ZP_16328180.1| bifunctional enzyme : (p)ppgpp synthetase II and
guanosine-3',5'-bisdiphosphate 3'-pyrophosphohydrolase
(ppgppase) protein [Ralstonia solanacearum MolK2]
gi|206589019|emb|CAQ35981.1| bifunctional enzyme : (p)ppgpp synthetase II and
guanosine-3',5'-bisdiphosphate 3'-pyrophosphohydrolase
(ppgppase) protein [Ralstonia solanacearum MolK2]
Length = 856
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 191/395 (48%), Gaps = 32/395 (8%)
Query: 48 SPAPLPSTAGEKMVVKLVGAFNELTERMNVLSSSSSRLLFKALKLSIPMLQSLPLSPDSR 107
P P+ + VV + G LTE+++ L + +L+ +A S L S
Sbjct: 124 GPTSQPAAPPRQQVVSIAG----LTEKLSYLKPADMKLVKEAFHFSDEA--HLGQYRQSG 177
Query: 108 SP-LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLR 166
P +T ++VA + A ++D + I A LL V+E GV+ ++ ++ G A L+ +
Sbjct: 178 EPYITHPVAVAEICAGWKLDVQSIMAALLHDVIEDQGVTKSELAEKFGAKVAELVDGLTK 237
Query: 167 VKNNVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMIS 225
+ L+ Q + A + RK L D+R +++ LA R MR LD++P ++ I+
Sbjct: 238 LDK---LEFQSREQAQAESFRKMLLAMARDVRVILVKLADRTHNMRTLDHVPPEKRRRIA 294
Query: 226 LEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQ 285
E M+I+AP+AH + N EL++LSFR F Y ++ +++ + ++ E
Sbjct: 295 GETMEIYAPIAHRLGLNTTYRELQELSFRIGSLFRYATLEKAVKAARGNRREVVSRILEA 354
Query: 286 LLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNL 345
+ L A+L GR K+ YS +K+ +V DV G RV+++
Sbjct: 355 AQRALADAGIPAELT------GREKTLYSIYRKMHDKQLSFSQVLDVYGFRVVVE----- 403
Query: 346 VNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLM 405
+ CY + SL+K MP + KDYIA PK NGY+SLH + V G +
Sbjct: 404 ------TQMQCYMAVGALHSLYKPMPGKFKDYIAIPKINGYQSLHTTL-VGPFGTP---V 453
Query: 406 EIQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKR 440
E QIRT EM+ +A G A+H YK P+ A++
Sbjct: 454 EFQIRTREMNQIAEAGVAAHWMYKQHHDEPDRAQQ 488
>gi|402313175|ref|ZP_10832096.1| putative GTP diphosphokinase [Lachnospiraceae bacterium ICM7]
gi|400366935|gb|EJP19955.1| putative GTP diphosphokinase [Lachnospiraceae bacterium ICM7]
Length = 761
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 103/322 (31%), Positives = 169/322 (52%), Gaps = 34/322 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLH-----ESLRVK 168
+ VA++LA+L++D E I+AGLL V+E +S +++ D G+ A+L+ L +K
Sbjct: 76 ICVAIILAELELDKETIAAGLLHDVIEDTAISFEELSDIFGVDVANLVDGVTKLTQLSLK 135
Query: 169 NNVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLE 227
N+ +++Q A LRK F DIR +++ LA RL MR L Y+ +Q + E
Sbjct: 136 ND-KIEMQ------AENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMKPEKQKEKARE 188
Query: 228 VMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLL 287
M I++P+A + + + EL+DLS +YL P Y + L + + +D +++
Sbjct: 189 TMDIYSPIAQRLGISKIKVELDDLSLKYLHPDVYYDLSEKLAFRKEQRQQFVD----EII 244
Query: 288 QCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVN 347
+ K + L+D + GR K +S KK++ + +++ DV +R+I++ +
Sbjct: 245 K--KFNEHLSDTGMKYQISGRVKHLFSIYKKMVNQNKTLDQIYDVFAIRIIVEDVA---- 298
Query: 348 TSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEI 407
ACY ++K +P R KDYIA PK N Y+SLH + +SD G+ E+
Sbjct: 299 -------ACYLALGTAHEIYKPIPGRFKDYIAMPKPNMYQSLHTTL-ISDTGQP---FEV 347
Query: 408 QIRTEEMDMLAVNGTASHAFYK 429
QIRT EM A G A+H YK
Sbjct: 348 QIRTFEMHKTAEFGIAAHWKYK 369
>gi|110633300|ref|YP_673508.1| (p)ppGpp synthetase I SpoT/RelA [Chelativorans sp. BNC1]
gi|110284284|gb|ABG62343.1| (p)ppGpp synthetase I, SpoT/RelA [Chelativorans sp. BNC1]
Length = 745
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 162/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ L VA +L D+ +D I+ LL +E + ++ + G L+ ++K
Sbjct: 46 FSHPLEVAAILTDMHLDEATIAVALLHDTIEDTSATRDEIDELFGSEIGKLVEGLTKLKK 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L L E A LRK L D+R L++ LA RL MR LD++P +++L I+ E
Sbjct: 106 ---LDLVSSRAEQAENLRKLLLAISEDVRVLLVKLADRLHNMRTLDHMPSHKRLRIAEET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLA + + ELE+L+FRY+ P +Y V L ++ +I EQ LQ
Sbjct: 163 MEIYAPLAGRMGMQDMREELEELAFRYINPEAYHAVTERLADLTERNRGVIGEI-EQALQ 221
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L + + + +V+ R K +S +K+ E+++D+ G RVI++ +
Sbjct: 222 HLFENYKI-----NAAVKSRQKKPWSVFRKMEAKALSFEQLSDIFGFRVIVETVED---- 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY I + W +P R KDYI+ PK N YRS+H + G +R +E+Q
Sbjct: 273 -------CYRALGAIHTTWSLVPGRFKDYISTPKQNDYRSIHTTI----VGPSRQRVELQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EMD +A G A+H+ YK
Sbjct: 322 IRTREMDRIAEYGVAAHSLYK 342
>gi|374307479|ref|YP_005053910.1| GTP diphosphokinase [Filifactor alocis ATCC 35896]
gi|291166507|gb|EFE28553.1| GTP diphosphokinase [Filifactor alocis ATCC 35896]
Length = 733
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 110/339 (32%), Positives = 179/339 (52%), Gaps = 34/339 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD + I+AGLL V+E ++ +++ G A L+ ++ +
Sbjct: 48 VEVAKILAELEMDMDTIAAGLLHDVLEDTDMTYEEMASEFGTTIADLVDGVTKLGQ---I 104
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K Q + A RK F DIR +++ LA RL MR + Y+P+ + + S E +I+
Sbjct: 105 KYQSKQEMQAENFRKMFFAMGKDIRVVLIKLADRLHNMRTMKYMPKEKAIEKSKETAEIY 164
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSY--LFVDTWLRSHETGSKPLIDIYKEQLLQCL 290
AP+A+ + + +E+EDL+ RYL P Y L L+ E + Y E +++ +
Sbjct: 165 APIANRLGIFRIKWEMEDLALRYLDPDGYRELTEKVSLKRQER------EKYIESVIEQI 218
Query: 291 KTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSE 350
+ D+ D ++GR K YS KK+ + EE+ D++ +R+I+ N+
Sbjct: 219 EVKLEENDITCD--IKGRAKHFYSIYKKMKYQDKTFEEIYDLMAVRIIV---DNI----- 268
Query: 351 VGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIR 410
+ CY ++ ++WK +P R KDYIA PK N Y+SLH V V +G+ PL EIQIR
Sbjct: 269 ---KDCYGAVGLVHTIWKPIPTRFKDYIAMPKPNMYQSLHTTV-VGPDGE--PL-EIQIR 321
Query: 411 TEEMDMLAVNGTASHAFYK-----GGLTNPEEAKRLKAI 444
T +M+ +A G A+H YK G ++ E K+L I
Sbjct: 322 TWDMNRIAEFGIAAHWKYKERFSANGNSDGEMEKKLSWI 360
>gi|445371359|ref|ZP_21425952.1| (p)ppGpp synthetase [Streptococcus thermophilus MTCC 5460]
gi|445386780|ref|ZP_21427668.1| (p)ppGpp synthetase [Streptococcus thermophilus MTCC 5461]
gi|444751339|gb|ELW76091.1| (p)ppGpp synthetase [Streptococcus thermophilus MTCC 5461]
gi|444751514|gb|ELW76250.1| (p)ppGpp synthetase [Streptococcus thermophilus MTCC 5460]
Length = 739
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 185/364 (50%), Gaps = 28/364 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL +DA ++ G L VVE ++ + G +++ ++ +
Sbjct: 55 IQVAGILADLHLDAVTVACGFLHDVVEDTEKTLDDLEADFGTDVRNIVDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E M+I+
Sbjct: 112 EYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED +FRYL + + ++ + L+D +++ +KT
Sbjct: 172 APLAHRLGISRIKWELEDTAFRYLNEVEFYKISHMMKEKRREREALVD----EIVYKIKT 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
LV D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 228 YTAEQGLVGD--VYGRPKHIYSIFRKMRDKKKRFDQIYDLIAIRCVMETHSDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PK+N Y+S+H V G P+ EIQIRT+
Sbjct: 279 ----YAMLGYIHELWRPMPGRFKDYIANPKSNAYQSIHTTV----YGPKGPI-EIQIRTK 329
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFEFDWR 472
+M +A G A+H YK G+ ++K M +L + L+D + + KGF +
Sbjct: 330 KMHQVAEYGVAAHWAYKKGIKGKVDSKESALGMNWIKDL--VELQDASNGDAKGFVDSVK 387
Query: 473 DRVF 476
+ +F
Sbjct: 388 EDIF 391
>gi|91774406|ref|YP_544162.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Methylobacillus flagellatus KT]
gi|91708393|gb|ABE48321.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Methylobacillus flagellatus KT]
Length = 740
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 161/323 (49%), Gaps = 29/323 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T +SVA +LA+L +D + A LL VVE GV+ Q++ DR G A L+ ++
Sbjct: 67 VTHPVSVAGILAELHLDPPTLIAALLHDVVEDTGVTKQEISDRFGKQVAELVDGLSKLDK 126
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ Q A RK L D+R +++ LA RL M LD + +Q I+ E
Sbjct: 127 ---IEFQSATQAQAENFRKMLLAMSQDVRVILVKLADRLHNMSTLDVMKPEKQRRIARET 183
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+AP+A+ + N + LEDLSF+YL+P + + + + K ++ + + Q
Sbjct: 184 LDIYAPIANRLGLNEIYQTLEDLSFKYLYPMRHRVISKAVMAARGNRKEVVGKILDAINQ 243
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIK--PSSNLV 346
LK A+ V GR K YS KK+ ++ D+ G RVI++ P+
Sbjct: 244 RLKEQNIEAE------VTGREKHLYSIYKKMTGKTITFSQIYDIYGFRVIVRDLPT---- 293
Query: 347 NTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLME 406
CY ++ L+K +P + KDYIA PKANGY+SLH + G +E
Sbjct: 294 ---------CYAALGVLHGLYKPIPGKFKDYIAIPKANGYQSLHTTL----FGPFGTPIE 340
Query: 407 IQIRTEEMDMLAVNGTASHAFYK 429
IQIR+ EM +A G A+H YK
Sbjct: 341 IQIRSREMHNIADAGVAAHWLYK 363
>gi|148256036|ref|YP_001240621.1| GTP pyrophosphokinase [Bradyrhizobium sp. BTAi1]
gi|146408209|gb|ABQ36715.1| GTP pyrophosphokinase [Bradyrhizobium sp. BTAi1]
Length = 729
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 111/329 (33%), Positives = 163/329 (49%), Gaps = 25/329 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
T L VA +L DL++D I A LL +E + ++ G L+ ++K
Sbjct: 46 FTHPLEVAAILTDLKLDDATIVAALLHDTIEDTEATRAEIDRLFGPEIGALVEGLTKLKR 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+L + + A LRK L D +R L++ LA RL MR L+++P + I+ E
Sbjct: 106 ---LELVSREAKQAENLRKLLLAIADDVRVLLVKLADRLHNMRTLEFVPEASRRRIAEET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+APLA + + ELEDLSFR L P +Y V L + ++ LI + QL +
Sbjct: 163 LDIYAPLAGRMGMQEMREELEDLSFRTLDPQAYDVVMQRLDALAERNRNLIGEIESQLAR 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ A V GR K +S K+ + E+++D+ G RVI+
Sbjct: 223 KFRDHGLTA------RVFGRRKRPFSIWTKMERKSIGFEQLSDIFGFRVIMPDLE----- 271
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
+CY I+ + W +P R KDYI+ PK N YRS+H V GK R +E+Q
Sbjct: 272 ------SCYRALGIVHTTWPVVPGRFKDYISTPKQNDYRSIHTT--VIGPGKQR--VELQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
IRTEEMD +A G A+HAFYK + +P E
Sbjct: 322 IRTEEMDQIAELGIAAHAFYKDDIGSPTE 350
>gi|86749726|ref|YP_486222.1| (p)ppGpp synthetase I [Rhodopseudomonas palustris HaA2]
gi|86572754|gb|ABD07311.1| (p)ppGpp synthetase I [Rhodopseudomonas palustris HaA2]
Length = 761
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 165/329 (50%), Gaps = 25/329 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ L VA +L +L++D I A LL +E + ++ G L+ ++K
Sbjct: 82 FSHPLEVAAILTNLKLDDATIVAALLHDTIEDTEATRTEIDKLFGHEIGSLVEGLTKLKR 141
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+L + + A LRK L D +R L++ LA RL MR LD++P + I+ E
Sbjct: 142 ---LELVSREAKQAENLRKLLLAIADDVRVLLIKLADRLHNMRTLDFVPPAARQRIAEET 198
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+APLA + + ELEDLSFR L P ++ V L + ++ LI + QL
Sbjct: 199 LDIYAPLAGRMGMQEMREELEDLSFRTLDPEAFAVVMQRLDALAERNRNLIGEIETQLCA 258
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L + A+ V GR K +S K+ + E+++D+ G RV++ N
Sbjct: 259 NLANNGIAAE------VTGRRKRPFSIWTKMERKSVGFEQLSDIYGFRVVL-------ND 305
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
E ACY ++ + W +P R KDYI+ PK N YRSLH V G + +E+Q
Sbjct: 306 IE----ACYRALGVVHTTWPMVPGRFKDYISTPKQNDYRSLHTTV----IGPGQQRVELQ 357
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
RT++M+ +A G A+HAFYK G+ +P E
Sbjct: 358 FRTQDMNQIAEYGIAAHAFYKDGVGSPTE 386
>gi|386014570|ref|YP_005932847.1| SpoT [Pseudomonas putida BIRD-1]
gi|313501276|gb|ADR62642.1| SpoT [Pseudomonas putida BIRD-1]
Length = 702
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 159/321 (49%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + + + G A L+ V
Sbjct: 46 VTHPLAVASILADMHMDHQSLMAAMLHDVIEDTGIAKEALSQQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ + P + ++S K ++ + L
Sbjct: 163 LEIYAPIANRLGMHTVRVEFEDLGFKAMHPMRSSLIHRAVKSARGNRKEIVAKIEHSLAN 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D + V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAADGIEGE------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|251798355|ref|YP_003013086.1| (p)ppGpp synthetase I SpoT/RelA [Paenibacillus sp. JDR-2]
gi|247545981|gb|ACT03000.1| (p)ppGpp synthetase I, SpoT/RelA [Paenibacillus sp. JDR-2]
Length = 727
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 163/324 (50%), Gaps = 27/324 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
++VA ++ D+QMD I A LL VVE V ++ +R + G A L+ +++ +
Sbjct: 49 VAVAEIIVDMQMDVLSIIAALLHDVVEDTTVDLEVIRAKFGETCAMLVDGLTKLEK---I 105
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ RK F DIR +++ LA RL MR L + Q I+ E ++I
Sbjct: 106 KFRSKEEQQNENYRKMFLAMAQDIRVILIKLADRLHNMRTLKFQSEEAQRRIAYETLEIF 165
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLI-DIYKEQLLQCLK 291
P+AH + + + +E+ED++ RYL P Y + ++ + I D+ +
Sbjct: 166 CPIAHRLGISAIKWEMEDIALRYLNPQQYYRIANLMKKKRAERELFISDVIG-------R 218
Query: 292 TDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEV 351
L ++ D + GR K YS KK+ + E+ D++ +R+I+ N+
Sbjct: 219 IKEKLEEMGIDGDISGRPKHIYSIYKKMTVKNKQFNEIYDLMAIRIIV---DNI------ 269
Query: 352 GERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRT 411
+ CY T II +LWK MP R KDYIA PKAN Y+SLH V + NG+ E+QIRT
Sbjct: 270 --KDCYATLGIIHTLWKPMPGRFKDYIAMPKANMYQSLHTTV-IGPNGEP---TEVQIRT 323
Query: 412 EEMDMLAVNGTASHAFYKGGLTNP 435
+M + G A+H YK G P
Sbjct: 324 WDMHRTSEYGIAAHWAYKEGTVVP 347
>gi|256823641|ref|YP_003147604.1| (p)ppGpp synthetase I SpoT/RelA [Kangiella koreensis DSM 16069]
gi|256797180|gb|ACV27836.1| (p)ppGpp synthetase I, SpoT/RelA [Kangiella koreensis DSM 16069]
Length = 705
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 161/331 (48%), Gaps = 25/331 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++ A +LADL +D + I A L+ V+E VS Q + G A L+ V
Sbjct: 49 ITHPVAAAHILADLHLDHQTIMAALMHDVIEDCDVSKQDLSGEFGETVADLVEG---VSK 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ Q + A RK + DIR +++ LA RL M+ L L ++ I+ E
Sbjct: 106 LTQIDFQSKEQAQAENFRKMMMAMTQDIRVILIKLADRLHNMQTLGALRPDKRRRIARET 165
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + L +LE L F ++P Y + ++ K +++ EQL
Sbjct: 166 LEIYAPIANRLGIYRLKEQLELLGFANMYPLRYRVLQHSVKKVRGHRKEIVERITEQLRT 225
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
LK + ++ GR KS YS KK+ EV D+ RVI
Sbjct: 226 RLKDSRITSKVI------GREKSVYSIYKKMRDKVGTFTEVMDIYAFRVITD-------- 271
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
E +CY I +L+K +P R KDYIA PKANGY+SLH + KT +E+Q
Sbjct: 272 ---SEDSCYRILGQIHNLFKPIPGRFKDYIAIPKANGYQSLHTVL----RNKTGMHIEVQ 324
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAK 439
IRTE+MD +A NG A+H YK G +P E K
Sbjct: 325 IRTEQMDQMAENGVAAHWLYKTGSAHPAETK 355
>gi|409398264|ref|ZP_11249078.1| GTP pyrophosphokinase [Pseudomonas sp. Chol1]
gi|409117194|gb|EKM93629.1| GTP pyrophosphokinase [Pseudomonas sp. Chol1]
Length = 747
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 109/339 (32%), Positives = 169/339 (49%), Gaps = 27/339 (7%)
Query: 102 LSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLL 161
L + S L +A +LADL++D + + A ++ + V G + + +V R G A L+
Sbjct: 57 LWSEGTSSYQTGLEIAEILADLKLDQDSLVAAVIYRGVREGKIQLAEVHQRFGPVVAKLI 116
Query: 162 HESLR---VKNNVNLKLQVLDDETAAA--LRKFCLTYYD-IRALILDLAIRLDMMRHLDY 215
LR + ++N + ++ A LRK + D +R ++ LA R +R +
Sbjct: 117 EGVLRMAAISASLNPRESLVLGSQAQVENLRKMLVAMVDDVRVALIKLAERTCAIRAVKN 176
Query: 216 LPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGS 275
++ ++ EV I+APLAH + ++ +ELEDLSFRYL P Y + L
Sbjct: 177 ASEDKRQRVAREVFDIYAPLAHRLGIGHIKWELEDLSFRYLEPEQYKQIAQLLHERRLDR 236
Query: 276 KPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGL 335
+ Y ++Q LK + T A + ++ GR K YS +K+ K G ++ DV +
Sbjct: 237 EQ----YIANVVQQLKDELTAAGIQPEID--GRAKHIYSIWRKMQKKGLQFSQIYDVRAV 290
Query: 336 RVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDV 395
RV++ EV R CYT I+ +LW+ +P DYIA PK NGYRSLH AV +
Sbjct: 291 RVLV---------PEV--RDCYTALGIVHTLWRHIPKEFDDYIANPKENGYRSLHTAV-I 338
Query: 396 SDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTN 434
GK ++E+QIRT+ M A G +H YKG N
Sbjct: 339 GPEGK---VLEVQIRTQAMHEEAELGVCAHWRYKGTDVN 374
>gi|84500567|ref|ZP_00998816.1| guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase, putative
[Oceanicola batsensis HTCC2597]
gi|84391520|gb|EAQ03852.1| guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase, putative
[Oceanicola batsensis HTCC2597]
Length = 727
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 169/329 (51%), Gaps = 27/329 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ L VA +LA+ +D I LL +E S Q V DR G A L++ ++
Sbjct: 48 FSHPLEVACILAEQHLDDATIVTALLHDTIEDTKASYQIVSDRFGPEIADLVNGVTKL-- 105
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
NL+L + A RK F D+R L++ LA RL MR + + + +Q+ + E
Sbjct: 106 -TNLQLTSTETRQAENFRKLFMAMSRDLRVLLVKLADRLHNMRTIKSMRQEKQVQKARET 164
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M I APLA + ++ ELEDL+F+ L P + ++ +R + + D+ +++
Sbjct: 165 MDIFAPLAGRMGMQWMREELEDLAFKVLNPDAR---NSIMRRYVVLQQEAGDVI-QRITG 220
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+KT+ ADLV +VS GR K YS +K+ + + ++D+ G R+I
Sbjct: 221 DMKTELEKADLVAEVS--GRAKRPYSIWRKMEEKEQSFSRLSDIYGFRIIT--------- 269
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
E CY +I W+ +P R KDYI++PK+NGYRS+H V +G+ +E+Q
Sbjct: 270 --ASEDHCYRVLGVIHRRWRSIPGRFKDYISQPKSNGYRSIHTTV----SGRDGKRVEVQ 323
Query: 409 IRTEEMDMLAVNGTASHAFYKGGL--TNP 435
IRT EM+ +A +G A+H Y+ G+ NP
Sbjct: 324 IRTREMNEVAESGVAAHWSYRDGVPAENP 352
>gi|227552630|ref|ZP_03982679.1| GTP diphosphokinase [Enterococcus faecium TX1330]
gi|257888143|ref|ZP_05667796.1| GTP pyrophosphokinase [Enterococcus faecium 1,141,733]
gi|293378678|ref|ZP_06624837.1| GTP diphosphokinase [Enterococcus faecium PC4.1]
gi|424764268|ref|ZP_18191711.1| GTP diphosphokinase [Enterococcus faecium TX1337RF]
gi|431040301|ref|ZP_19492808.1| RelA/SpoT family protein [Enterococcus faecium E1590]
gi|431750927|ref|ZP_19539621.1| RelA/SpoT family protein [Enterococcus faecium E2620]
gi|431758269|ref|ZP_19546897.1| RelA/SpoT family protein [Enterococcus faecium E3083]
gi|431763734|ref|ZP_19552283.1| RelA/SpoT family protein [Enterococcus faecium E3548]
gi|227178256|gb|EEI59228.1| GTP diphosphokinase [Enterococcus faecium TX1330]
gi|257824197|gb|EEV51129.1| GTP pyrophosphokinase [Enterococcus faecium 1,141,733]
gi|292642718|gb|EFF60869.1| GTP diphosphokinase [Enterococcus faecium PC4.1]
gi|402419837|gb|EJV52110.1| GTP diphosphokinase [Enterococcus faecium TX1337RF]
gi|430562153|gb|ELB01406.1| RelA/SpoT family protein [Enterococcus faecium E1590]
gi|430616185|gb|ELB53109.1| RelA/SpoT family protein [Enterococcus faecium E2620]
gi|430617932|gb|ELB54796.1| RelA/SpoT family protein [Enterococcus faecium E3083]
gi|430622107|gb|ELB58848.1| RelA/SpoT family protein [Enterococcus faecium E3548]
Length = 786
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 161/319 (50%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL+MD ++ G L VVE V+++ +R+ G A L+ ++ +
Sbjct: 104 IQVAGILADLKMDPHTVATGFLHDVVEDTEVTLEDLREEFGDDVAMLVDGVTKLGK---I 160
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK L D+R +++ LA RL MR L +L +Q I+ E ++I+
Sbjct: 161 KYKSHEEQLAENHRKMLLAMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIY 220
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + +++ + ++ E + +
Sbjct: 221 APLAHRLGISRIKWELEDTALRYLNPKQYYRIVHLMQTKREEREKYVNGTVEDIRVATEE 280
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
A+ + GR K YS +K+ + E+ D+L +RVI+ +
Sbjct: 281 LGIFAE------IYGRPKHIYSIYRKMKDQKKQFNEIYDLLAIRVIVDSIKD-------- 326
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKAN Y+SLH V G +EIQIRT+
Sbjct: 327 ---CYAVLGAIHTKWKPMPGRFKDYIAMPKANMYQSLHTTV----IGPAGNPVEIQIRTQ 379
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 380 EMHEIAEFGVAAHWAYKEG 398
>gi|304385085|ref|ZP_07367431.1| GTP diphosphokinase [Pediococcus acidilactici DSM 20284]
gi|427439778|ref|ZP_18924342.1| GTP diphosphokinase [Pediococcus lolii NGRI 0510Q]
gi|304329279|gb|EFL96499.1| GTP diphosphokinase [Pediococcus acidilactici DSM 20284]
gi|425787910|dbj|GAC45130.1| GTP diphosphokinase [Pediococcus lolii NGRI 0510Q]
Length = 745
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 169/323 (52%), Gaps = 26/323 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD E +++G L VE +++ V + G A ++ ++ +
Sbjct: 57 IQVAGILANLKMDPETVASGFLHDTVEDTLITLGDVEELFGHDVAVIVDGVSKISK---I 113
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + ++ A RK L DIR +I+ LA RL MR L +L +Q IS E ++I+
Sbjct: 114 KYKSNQEQLAENHRKLLLAMSQDIRVIIVKLADRLHNMRTLRHLRPDKQRRISNETLEIY 173
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + + +ELED++ RYL P Y + + S + I+ +L
Sbjct: 174 APLAERLGISTIKWELEDIALRYLNPQQYYRIVHLMNSRRAQREEYINSAIGEL------ 227
Query: 293 DATLADL-VEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEV 351
+ +ADL ++ V + GR K YS +K++ + ++ D+L +RVI T V
Sbjct: 228 EDAIADLHLKHVDIYGRPKHIYSIYRKMVDQHKQFSQIYDLLAVRVI---------TDTV 278
Query: 352 GERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRT 411
R CY I + WK +P R KDYIA PKAN Y+SLH V V G RPL E QIRT
Sbjct: 279 --RDCYAVLGAIHAKWKPIPGRFKDYIAMPKANMYQSLHTTV-VGPEG--RPL-EFQIRT 332
Query: 412 EEMDMLAVNGTASHAFYKGGLTN 434
E M +A G A+H YK G+T+
Sbjct: 333 EAMHRVAEYGVAAHWAYKEGITD 355
>gi|402701298|ref|ZP_10849277.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pseudomonas fragi A22]
Length = 701
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 161/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + + + G A L+ V
Sbjct: 46 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALVAQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ ++P + ++ K +++ +E L
Sbjct: 163 LEIYAPIANRLGMHSIRIEFEDLGFKAMYPMRSARIYQAVKRARGNRKEIVNKIEESLSH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D + V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAVDGIQGE------VSGRQKHIYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|319784510|ref|YP_004143986.1| RelA/SpoT family protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317170398|gb|ADV13936.1| RelA/SpoT family protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 742
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 163/329 (49%), Gaps = 29/329 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ L VA +L ++ MD I+ LL +E + ++ D G L+ ++K
Sbjct: 46 FSHPLEVAAILTEMHMDEATIAVALLHDTIEDTTATRAEIDDLFGPEMGKLVEGLTKLKK 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L L E A LRK L D+R L++ LA RL MR LD++P ++L I+ E
Sbjct: 106 ---LDLVSKKAEQAENLRKLLLAISEDVRVLLVKLADRLHNMRTLDHMPEAKRLRIAEET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRS-HETGSKPLIDIYKEQLL 287
M I+APLA + + ELE+++FR++ P +Y V L E L DI E+ L
Sbjct: 163 MDIYAPLAGRMGMQGMREELEEIAFRFINPEAYRAVTARLAEIFERNKGVLTDI--EKAL 220
Query: 288 QCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVN 347
L + + SV+ R K +S +K+ E+++D+ G RV+ V+
Sbjct: 221 STLFEKHAI-----NASVKSRQKKPWSVFRKMEAKALSFEQLSDIFGFRVV-------VD 268
Query: 348 TSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEI 407
T E CY I + W +P R KDYI+ PK N YRS+H + G +R +E+
Sbjct: 269 TVE----DCYRALGAIHTAWSMVPGRFKDYISTPKQNDYRSIHTTI----VGPSRQRVEL 320
Query: 408 QIRTEEMDMLAVNGTASHAFYK--GGLTN 434
QIRT EM+ +A G A+H+ YK GG TN
Sbjct: 321 QIRTREMNKIAEYGVAAHSIYKDTGGKTN 349
>gi|425054812|ref|ZP_18458314.1| GTP diphosphokinase [Enterococcus faecium 505]
gi|430840370|ref|ZP_19458295.1| RelA/SpoT family protein [Enterococcus faecium E1007]
gi|431064204|ref|ZP_19493551.1| RelA/SpoT family protein [Enterococcus faecium E1604]
gi|431124683|ref|ZP_19498679.1| RelA/SpoT family protein [Enterococcus faecium E1613]
gi|431593365|ref|ZP_19521694.1| RelA/SpoT family protein [Enterococcus faecium E1861]
gi|431741443|ref|ZP_19530348.1| RelA/SpoT family protein [Enterococcus faecium E2039]
gi|403035121|gb|EJY46526.1| GTP diphosphokinase [Enterococcus faecium 505]
gi|430495135|gb|ELA71342.1| RelA/SpoT family protein [Enterococcus faecium E1007]
gi|430566968|gb|ELB06056.1| RelA/SpoT family protein [Enterococcus faecium E1613]
gi|430568845|gb|ELB07875.1| RelA/SpoT family protein [Enterococcus faecium E1604]
gi|430591242|gb|ELB29280.1| RelA/SpoT family protein [Enterococcus faecium E1861]
gi|430601621|gb|ELB39215.1| RelA/SpoT family protein [Enterococcus faecium E2039]
Length = 786
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 161/319 (50%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL+MD ++ G L VVE V+++ +R+ G A L+ ++ +
Sbjct: 104 IQVAGILADLKMDPHTVATGFLHDVVEDTEVTLEDLREEFGDDVAMLVDGVTKLGK---I 160
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK L D+R +++ LA RL MR L +L +Q I+ E ++I+
Sbjct: 161 KYKSHEEQLAENHRKMLLAMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIY 220
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + +++ + ++ E + +
Sbjct: 221 APLAHRLGISRIKWELEDTALRYLNPKQYYRIVHLMQTKREEREKYVNGTVEDIRVATEE 280
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
A+ + GR K YS +K+ + E+ D+L +RVI+ +
Sbjct: 281 LGIFAE------IYGRPKHIYSIYRKMKDQKKQFNEIYDLLAIRVIVDSIKD-------- 326
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKAN Y+SLH V G +EIQIRT+
Sbjct: 327 ---CYAVLGAIHTKWKPMPGRFKDYIAMPKANMYQSLHTTV----IGPAGNPVEIQIRTQ 379
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 380 EMHEIAEFGVAAHWAYKEG 398
>gi|397696752|ref|YP_006534635.1| Guanosine-3',5'-bis [Pseudomonas putida DOT-T1E]
gi|397333482|gb|AFO49841.1| Guanosine-3',5'-bis [Pseudomonas putida DOT-T1E]
Length = 702
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 159/321 (49%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + + + G A L+ V
Sbjct: 46 VTHPLAVASILADMHMDHQSLMAAMLHDVIEDTGIAKEALSQQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ + P + ++S K ++ + L
Sbjct: 163 LEIYAPIANRLGMHTVRVEFEDLGFKAMHPMRSSLIHRAVKSARGNRKEIVAKIEHSLAN 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D + V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLSADGIEGE------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|146306766|ref|YP_001187231.1| (p)ppGpp synthetase I SpoT/RelA [Pseudomonas mendocina ymp]
gi|421506221|ref|ZP_15953146.1| (p)ppGpp synthetase I SpoT/RelA [Pseudomonas mendocina DLHK]
gi|145574967|gb|ABP84499.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudomonas mendocina ymp]
gi|400343003|gb|EJO91388.1| (p)ppGpp synthetase I SpoT/RelA [Pseudomonas mendocina DLHK]
Length = 747
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 162/329 (49%), Gaps = 27/329 (8%)
Query: 108 SPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLR- 166
S L +A +LADL++D + + A ++ + V G +++ V R G A L+ LR
Sbjct: 63 STFRAGLDIAEILADLKLDQDSLVAAVIYRGVREGKITLAAVHQRFGPVVAKLIEGVLRM 122
Query: 167 --VKNNVNLKLQVL--DDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQ 221
+ ++N + V+ LRK + D +R ++ LA R +R + ++
Sbjct: 123 AAISASINPRESVVVGSQTQVENLRKMLVAMVDDVRVALIKLAERTCAIRAVKEADEEKR 182
Query: 222 LMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDI 281
++ EV I+APLAH + ++ +ELEDLSFRYL P Y + L + I+
Sbjct: 183 QRVAREVFDIYAPLAHRLGIGHIKWELEDLSFRYLEPEQYKQIAKLLHERRLDREQYIND 242
Query: 282 YKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKP 341
L Q L+ AD + GR K YS +K+ + G ++ DV +RV++
Sbjct: 243 AMAHLRQELEATGIKAD------ISGRAKHIYSIWRKMQRKGLQFSQIYDVRAVRVLV-- 294
Query: 342 SSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKT 401
EV R CYTT I+ +LW+ +P DYIA PK NGYRSLH AV + GK
Sbjct: 295 -------PEV--RDCYTTLGIVHTLWRHIPKEFDDYIANPKENGYRSLHTAV-LGPEGK- 343
Query: 402 RPLMEIQIRTEEMDMLAVNGTASHAFYKG 430
++E+QIRT M A G +H YKG
Sbjct: 344 --VLEVQIRTHSMHEEAELGVCAHWRYKG 370
>gi|409351741|ref|ZP_11234324.1| GTP pyrophosphokinase [Lactobacillus equicursoris CIP 110162]
gi|407876538|emb|CCK86382.1| GTP pyrophosphokinase [Lactobacillus equicursoris CIP 110162]
Length = 753
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 111/333 (33%), Positives = 169/333 (50%), Gaps = 31/333 (9%)
Query: 116 VALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKL 175
VA LA+L +D + ++AG L VE V+ ++++ G A ++ ++ +
Sbjct: 57 VAGTLANLGLDPDTVAAGFLHDTVEDTSVTNDDIKEKFGADVAFIVDGVTKLNK---YEY 113
Query: 176 QVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAP 234
+ + A RK + D+R +++ LA RL M L++L +Q I+ E + I+AP
Sbjct: 114 KSHKEFLAENHRKMLIAMAKDLRVILVKLADRLHNMHTLEHLRPDKQRRIAAETLDIYAP 173
Query: 235 LAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWL---RSHETGSKPLIDIYKEQLLQCLK 291
LA + + +ELED+SF Y+ P Y + + + RS G Y + + LK
Sbjct: 174 LADRLGIGTIKWELEDMSFHYINPDEYYKIVSMMDAKRSEREG-------YIKDAIDYLK 226
Query: 292 TDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEV 351
TL L D + GR K YS KK++ + E+ D+L +RVI+ P+
Sbjct: 227 --GTLDSLGIDYDISGRPKHIYSIYKKMVNKHKDFNEIYDLLAVRVIV-PTV-------- 275
Query: 352 GERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRT 411
+ CY + + WK MP R KDYIA PKANGY+SLH + + GK PL EIQIRT
Sbjct: 276 --KDCYAVLGAVHTKWKPMPGRFKDYIAMPKANGYQSLHTTI-IGPGGK--PL-EIQIRT 329
Query: 412 EEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAI 444
+EM +A G A+H YK G + EAK A+
Sbjct: 330 KEMHEVAEYGVAAHWAYKRGNFDGVEAKEGGAL 362
>gi|398844765|ref|ZP_10601821.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM84]
gi|398254264|gb|EJN39365.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM84]
Length = 702
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 159/321 (49%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + + + G A L+ V
Sbjct: 46 VTHPLAVASILADMHMDHQSLMAAMLHDVIEDTGIAKEALSQQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ + P + ++S K ++ + L
Sbjct: 163 LEIYAPIANRLGMHTVRVEFEDLGFKAMHPMRSSLIHRAVKSARGNRKEIVAKIEHSLAN 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D + V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAADGIQGE------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|398913340|ref|ZP_10656398.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM49]
gi|398930397|ref|ZP_10664546.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM48]
gi|398165377|gb|EJM53495.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM48]
gi|398180850|gb|EJM68427.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM49]
Length = 701
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 161/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + ++ + G A L+ V
Sbjct: 46 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALQAQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ + P + ++ K +++ +E L
Sbjct: 163 LEIYAPIANRLGMHAIRIEFEDLGFKAMHPMRSARIYQAVKRARGNRKEIVNKIEESLSH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D + V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAIDGIQGE------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|377809688|ref|YP_005004909.1| GTP pyrophosphokinase [Pediococcus claussenii ATCC BAA-344]
gi|361056429|gb|AEV95233.1| GTP pyrophosphokinase [Pediococcus claussenii ATCC BAA-344]
Length = 742
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 113/326 (34%), Positives = 171/326 (52%), Gaps = 26/326 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+M E +++G L VE +++ +++ G A ++ ++ +
Sbjct: 55 IQVAGILANLKMYPETVASGFLHDTVEDTLITLGDIQELFGKDVAVIVDGVSKISK---I 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + ++ A RK L DIR +I+ LA RL MR L++L +Q IS E ++I+
Sbjct: 112 KYKSNQEQLAENHRKLLLAMSKDIRVIIVKLADRLHNMRTLEHLRPEKQRRISNETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + + +ELED S RYL P Y + + S T + I+ + + +K
Sbjct: 172 APLAERLGISTIKWELEDTSLRYLNPQQYYRIVHLMNSRRTQREEYIN----KAIDDIK- 226
Query: 293 DATLADL-VEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEV 351
+ DL +E + GR K YS +K++ + ++ D+L +RVI T +
Sbjct: 227 -VAVDDLGLEYTEIYGRPKHIYSVYRKMVDQHKQFSQIYDLLAIRVI---------TDSI 276
Query: 352 GERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRT 411
R CY I + WK MP R KDYIA PKAN Y+SLH V V G RPL E+QIRT
Sbjct: 277 --RDCYAILGAIHTKWKPMPGRFKDYIAMPKANMYQSLHTTV-VGPEG--RPL-EVQIRT 330
Query: 412 EEMDMLAVNGTASHAFYKGGLTNPEE 437
EEM +A G A+H YK G T+ E
Sbjct: 331 EEMHRVAEYGVAAHWAYKEGKTDKVE 356
>gi|26991978|ref|NP_747403.1| (p)ppGpp synthetase I SpoT/RelA [Pseudomonas putida KT2440]
gi|24987109|gb|AAN70867.1|AE016731_2 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pseudomonas putida KT2440]
Length = 702
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 159/321 (49%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + + + G A L+ V
Sbjct: 46 VTHPLAVASILADMHMDHQSLMAAMLHDVIEDTGIAKEALSQQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ + P + ++S K ++ + L
Sbjct: 163 LEIYAPIANRLGMHTVRVEFEDLGFKAMHPMRSSLIHRAVKSARGNRKEIVAKIEHSLAN 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D + V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAADGIEGE------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|410459965|ref|ZP_11313653.1| GTP pyrophosphokinase [Bacillus azotoformans LMG 9581]
gi|409927803|gb|EKN64929.1| GTP pyrophosphokinase [Bacillus azotoformans LMG 9581]
Length = 733
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 166/324 (51%), Gaps = 35/324 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD ++AG L VVE V+++ + A L+ ++ +
Sbjct: 55 IQVAGILAELEMDPVAVAAGFLHDVVEDTEVTLKDLEVAFNKEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + + A RK F DIR +++ LA RL MR L +LP +Q IS E ++I
Sbjct: 112 KYKSKEAQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPPEKQRRISNETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRS----HETGSKPLIDIYKEQLLQ 288
APLAH + + + +ELED + RYL P Y + +++ E +ID +++L +
Sbjct: 172 APLAHRLGISTIKWELEDTALRYLNPQQYYRIVNLMKNKRAERENQVHEVIDEIRKRLDE 231
Query: 289 C-LKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVN 347
LK D + GR K YS +K++ + E+ D+L +RV+++ +
Sbjct: 232 VHLKAD-----------ISGRPKHIYSIYRKMVLQNKQFNEIYDLLAVRVLVESIKD--- 277
Query: 348 TSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEI 407
CY +I + WK MP R KDYIA PKAN Y+SLH V + G PL E+
Sbjct: 278 --------CYAVLGVIHTCWKPMPGRFKDYIAMPKANMYQSLHTTV-IGPKGD--PL-EV 325
Query: 408 QIRTEEMDMLAVNGTASHAFYKGG 431
QIRT EM +A G A+H YK G
Sbjct: 326 QIRTTEMHQIAEYGIAAHWAYKEG 349
>gi|284991594|ref|YP_003410148.1| (p)ppGpp synthetase I SpoT/RelA [Geodermatophilus obscurus DSM
43160]
gi|284064839|gb|ADB75777.1| (p)ppGpp synthetase I, SpoT/RelA [Geodermatophilus obscurus DSM
43160]
Length = 861
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 165/321 (51%), Gaps = 27/321 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LA L MD + A LL VE G +++ +R+ G AHL+ ++
Sbjct: 173 ITHPLAVATILAGLGMDTTTLVAALLHDTVEDTGQTLESIREAFGPEVAHLVDGVTKID- 231
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++++ D A +RK + D R L++ LA RL MR L +LP +Q + E
Sbjct: 232 ----RVKLGDAAQAETIRKMIVAMARDPRVLVIKLADRLHNMRTLRFLPPEKQERKARET 287
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I APLAH + N + +ELEDL+F L+P Y D +R P D Y ++
Sbjct: 288 LEILAPLAHRLGMNTIKWELEDLAFATLYPKRY---DEIVRLVAE-RAPSRDTYLAEVTA 343
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ TD A + V V GR K YS +K++ GR ++ D++G+R+++
Sbjct: 344 AV-TDQLKAAGIPAV-VTGRPKHYYSIYQKMIVRGRDFTDIWDLVGIRILVD-------- 393
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY I+ + W+ +P R KD++A PK N Y+SLH V + GK +E+Q
Sbjct: 394 ---SVRDCYAALGIMHAHWQPVPGRFKDFVAMPKFNMYQSLHTTV-IGPQGKP---VELQ 446
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT +M A G A+H YK
Sbjct: 447 IRTHDMHRTAEYGIAAHWKYK 467
>gi|293571366|ref|ZP_06682397.1| GTP pyrophosphokinase [Enterococcus faecium E980]
gi|431738631|ref|ZP_19527574.1| RelA/SpoT family protein [Enterococcus faecium E1972]
gi|291608582|gb|EFF37873.1| GTP pyrophosphokinase [Enterococcus faecium E980]
gi|430597359|gb|ELB35162.1| RelA/SpoT family protein [Enterococcus faecium E1972]
Length = 786
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 161/319 (50%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL+MD ++ G L VVE V+++ +R+ G A L+ ++ +
Sbjct: 104 IQVAGILADLKMDPHTVATGFLHDVVEDTEVTLEDLREEFGDDVAMLVDGVTKLGK---I 160
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK L D+R +++ LA RL MR L +L +Q I+ E ++I+
Sbjct: 161 KYKSHEEQLAENHRKMLLAMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIY 220
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + +++ + ++ E + +
Sbjct: 221 APLAHRLGISRIKWELEDTALRYLNPKQYYRIVHLMQTKREEREKYVNGTVEDIRVATEE 280
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
A+ + GR K YS +K+ + E+ D+L +RVI+ +
Sbjct: 281 LGIFAE------IYGRPKHIYSIYRKMKDQKKQFNEIYDLLAIRVIVDSIKD-------- 326
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKAN Y+SLH V G +EIQIRT+
Sbjct: 327 ---CYAVLGAIHTKWKPMPGRFKDYIAMPKANMYQSLHTTV----IGPAGNPVEIQIRTQ 379
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 380 EMHEIAEFGVAAHWAYKEG 398
>gi|408409949|ref|ZP_11181214.1| GTP pyrophosphokinase [Lactobacillus sp. 66c]
gi|407875894|emb|CCK83020.1| GTP pyrophosphokinase [Lactobacillus sp. 66c]
Length = 753
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 111/333 (33%), Positives = 169/333 (50%), Gaps = 31/333 (9%)
Query: 116 VALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKL 175
VA LA+L +D + ++AG L VE V+ ++++ G A ++ ++ +
Sbjct: 57 VAGTLANLGLDPDTVAAGFLHDTVEDTSVTNDDIKEKFGADVAFIVDGVTKLNK---YEY 113
Query: 176 QVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAP 234
+ + A RK + D+R +++ LA RL M L++L +Q I+ E + I+AP
Sbjct: 114 KSHKEFLAENHRKMLIAMAKDLRVILVKLADRLHNMHTLEHLRPDKQRRIAAETLDIYAP 173
Query: 235 LAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWL---RSHETGSKPLIDIYKEQLLQCLK 291
LA + + +ELED+SF Y+ P Y + + + RS G Y + + LK
Sbjct: 174 LADRLGIGTIKWELEDMSFHYINPDEYYKIVSMMDAKRSEREG-------YIKDAIDYLK 226
Query: 292 TDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEV 351
TL L D + GR K YS KK++ + E+ D+L +RVI+ P+
Sbjct: 227 --GTLDSLGIDYDISGRPKHIYSIYKKMVNKHKDFNEIYDLLAVRVIV-PTV-------- 275
Query: 352 GERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRT 411
+ CY + + WK MP R KDYIA PKANGY+SLH + + GK PL EIQIRT
Sbjct: 276 --KDCYAVLGAVHTKWKPMPGRFKDYIAMPKANGYQSLHTTI-IGPGGK--PL-EIQIRT 329
Query: 412 EEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAI 444
+EM +A G A+H YK G + EAK A+
Sbjct: 330 KEMHEVAEYGVAAHWAYKRGNFDGVEAKEGGAL 362
>gi|294501369|ref|YP_003565069.1| GTP pyrophosphokinase [Bacillus megaterium QM B1551]
gi|295706716|ref|YP_003599791.1| GTP pyrophosphokinase [Bacillus megaterium DSM 319]
gi|294351306|gb|ADE71635.1| GTP pyrophosphokinase [Bacillus megaterium QM B1551]
gi|294804375|gb|ADF41441.1| GTP pyrophosphokinase [Bacillus megaterium DSM 319]
Length = 732
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 162/325 (49%), Gaps = 33/325 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD I+AG L VVE ++++ + A L+ ++ +
Sbjct: 55 IQVAGILVDLDMDPATIAAGFLHDVVEDTEITLKDLEKAFNEEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP+ +Q IS E ++I
Sbjct: 112 KYKSKEEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRS----HETGSKPLIDIYKEQLLQ 288
APLAH + + + +ELED + RYL P Y + ++ E +ID +EQ
Sbjct: 172 APLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAEREQYLAEVIDEVREQ--- 228
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ ++ V + GR K YS +K+ + E+ D+L +R+I+ +
Sbjct: 229 -------VDEVSIKVEISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRIIVNSIKD---- 277
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY II + WK MP R KDYIA PK N Y+SLH V + G PL E+Q
Sbjct: 278 -------CYAVLGIIHTCWKPMPGRFKDYIAMPKQNMYQSLHTTV-IGPKGD--PL-EVQ 326
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLT 433
IRT +M +A G A+H YK G T
Sbjct: 327 IRTFDMHQIAEYGIAAHWAYKEGKT 351
>gi|257899574|ref|ZP_05679227.1| RelA/SpoT protein [Enterococcus faecium Com15]
gi|257837486|gb|EEV62560.1| RelA/SpoT protein [Enterococcus faecium Com15]
Length = 737
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 161/319 (50%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL+MD ++ G L VVE V+++ +R+ G A L+ ++ +
Sbjct: 55 IQVAGILADLKMDPHTVATGFLHDVVEDTEVTLEDLREEFGDDVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK L D+R +++ LA RL MR L +L +Q I+ E ++I+
Sbjct: 112 KYKSHEEQLAENHRKMLLAMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + +++ + ++ E + +
Sbjct: 172 APLAHRLGISRIKWELEDTALRYLNPKQYYRIVHLMQTKREEREKYVNGTVEDIRVATEE 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
A+ + GR K YS +K+ + E+ D+L +RVI+ +
Sbjct: 232 LGIFAE------IYGRPKHIYSIYRKMKDQKKQFNEIYDLLAIRVIVDSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKAN Y+SLH V G +EIQIRT+
Sbjct: 278 ---CYAVLGAIHTKWKPMPGRFKDYIAMPKANMYQSLHTTV----IGPAGNPVEIQIRTQ 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 331 EMHEIAEFGVAAHWAYKEG 349
>gi|15594543|ref|NP_212332.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Borrelia
burgdorferi B31]
gi|218249436|ref|YP_002374725.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
((ppGpp)ase) [Borrelia burgdorferi ZS7]
gi|223889269|ref|ZP_03623857.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
((ppGpp)ase) [Borrelia burgdorferi 64b]
gi|226321516|ref|ZP_03797042.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Borrelia
burgdorferi Bol26]
gi|6647844|sp|O51216.1|SPOT_BORBU RecName: Full=Guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase; AltName: Full=Penta-phosphate
guanosine-3'-pyrophosphohydrolase; Short=(ppGpp)ase
gi|2688094|gb|AAC66590.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
((ppGpp)ase) (Penta-phosphate
guanosine-3'-pyrophosphohydrolase) [Borrelia burgdorferi
B31]
gi|27802072|gb|AAL71859.1| (p)ppGpp synthase/pyrophosphohydrolase [Borrelia burgdorferi]
gi|218164624|gb|ACK74685.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
((ppGpp)ase) [Borrelia burgdorferi ZS7]
gi|223885302|gb|EEF56404.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
((ppGpp)ase) [Borrelia burgdorferi 64b]
gi|226232705|gb|EEH31458.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Borrelia
burgdorferi Bol26]
Length = 667
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 173/353 (49%), Gaps = 41/353 (11%)
Query: 86 LFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVS 145
+FKAL+++ L + + V+L LA Q+D + AGLL V+E V
Sbjct: 40 IFKALEIA-EQLHYGQYRESGEPYIIHPIMVSLFLAKFQLDFKATIAGLLHDVLEDTNVE 98
Query: 146 IQQVRDRI---------GIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRKFCLTYYDI 196
+++ G+ H LH R N ++ F +T+ DI
Sbjct: 99 KEEIVKEFDEEILSLIDGVTKIHDLHNKTRSIKEANTISKMF----------FAMTH-DI 147
Query: 197 RALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYL 256
R +I+ LA +L M L YLP+ +Q I+ + + + P+A + + L LEDLSF++L
Sbjct: 148 RIIIIKLADKLHNMTTLSYLPKNRQDRIAKDCLSTYVPIAERLGISSLKTYLEDLSFKHL 207
Query: 257 FPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTM 316
+P Y + +L ET + +YK +L ++ + + + +++V R K YS
Sbjct: 208 YPKDYKEIKNFLS--ETKIEREKKLYKGKL--SIEKELQKSGIEAEITV--RSKHFYSIF 261
Query: 317 KKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKD 376
+K+ ++ D LG+R+I K ++ CY EI+ +WK +P R KD
Sbjct: 262 RKMQTRTNKLTQIFDTLGIRIICKK-----------QKECYEILEIVHRVWKPIPGRLKD 310
Query: 377 YIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYK 429
YIA PK N Y+SLH V + ++ + L+EIQIRTEEMD +A G A+H YK
Sbjct: 311 YIASPKENKYQSLHTTVRIPEDNQ---LIEIQIRTEEMDRIANYGVAAHWIYK 360
>gi|384044791|ref|YP_005492808.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(PpGpp
synthetase I) ((P)ppGpp synthetase) [Bacillus megaterium
WSH-002]
gi|345442482|gb|AEN87499.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(PpGpp
synthetase I) ((P)ppGpp synthetase) [Bacillus megaterium
WSH-002]
Length = 732
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 162/325 (49%), Gaps = 33/325 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL MD I+AG L VVE ++++ + A L+ ++ +
Sbjct: 55 IQVAGILVDLDMDPATIAAGFLHDVVEDTEITLKDLEKAFNEEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP+ +Q IS E ++I
Sbjct: 112 KYKSKEEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRS----HETGSKPLIDIYKEQLLQ 288
APLAH + + + +ELED + RYL P Y + ++ E +ID +EQ
Sbjct: 172 APLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAEREQYLAEVIDEVREQ--- 228
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ ++ V + GR K YS +K+ + E+ D+L +R+I+ +
Sbjct: 229 -------VDEVSIKVEISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRIIVNSIKD---- 277
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY II + WK MP R KDYIA PK N Y+SLH V + G PL E+Q
Sbjct: 278 -------CYAVLGIIHTCWKPMPGRFKDYIAMPKQNMYQSLHTTV-IGPKGD--PL-EVQ 326
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLT 433
IRT +M +A G A+H YK G T
Sbjct: 327 IRTFDMHQIAEYGIAAHWAYKEGKT 351
>gi|325846553|ref|ZP_08169468.1| GTP diphosphokinase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325481311|gb|EGC84352.1| GTP diphosphokinase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 726
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 160/321 (49%), Gaps = 33/321 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
++VA ++++Q+D + I AGL+ V+E VS Q+RD G L+ ++K L
Sbjct: 55 IAVATTISNMQLDDQTICAGLMHDVLEDTPVSKDQMRDLFGEEITFLVDGVTKLKK---L 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ +++ A +RK L DIR +++ LA RL MR L+Y +Q + E ++I+
Sbjct: 112 NYKTREEKQAENIRKMVLAMSNDIRVILIKLADRLHNMRTLEYKTEKKQKQTASETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYL----FVDTWLRSHETGSKPLIDIYKEQLLQ 288
PLAH + + +ELEDL FRY P Y V R E +ID
Sbjct: 172 VPLAHRLGIYTMKWELEDLCFRYQKPEEYYELAQMVHNKRRERENYINEIIDT------- 224
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
D +L+ + + GR K +S KK+ ++ E+ D+ +RV++ ++
Sbjct: 225 ---LDKSLSSSKINYEISGRPKGLFSIYKKMSRNKIEFNEIYDLTAVRVLVDTVAD---- 277
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + S+W+ +P+R KDYI +PK NGYRSLH V +D ++P E+Q
Sbjct: 278 -------CYEVLGKVHSIWRPIPNRIKDYIGQPKPNGYRSLHTTVFGAD---SKPF-EVQ 326
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT +M G A+H YK
Sbjct: 327 IRTRQMHYECEYGIAAHWKYK 347
>gi|406871482|gb|EKD22287.1| hypothetical protein ACD_87C00068G0002 [uncultured bacterium]
Length = 714
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 111/324 (34%), Positives = 165/324 (50%), Gaps = 23/324 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
LT + V +LAD+++DA + GLL VE + +Q+ + G A L+ + L +
Sbjct: 46 LTHPMEVCGILADMKLDAATLVTGLLHDTVEDTLATQEQIEESFGKEVAFLV-DGLTKIS 104
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ L Q ++ A RK L DIR L++ LA R+ MR L++ +Q+ I+ E
Sbjct: 105 KITLGNQ--EERQAENFRKMILAMSSDIRILLIRLADRVHNMRTLEFQTPERQVYIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++++APLA+ + N++ ELEDLSFRYL +Y L K D Y E++
Sbjct: 163 LELYAPLANRLGINWMKVELEDLSFRYLDFEAY----NDLAKRVVKKKDKRDDYTEEVRS 218
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ + L + V V+GR K YS KK+ + +EV D+ R+I+
Sbjct: 219 IIAKEMGLLGV--SVEVEGRAKHFYSIYKKMKEQHINFDEVFDLTAFRIILDSDK----- 271
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
E+ CY ++ +LWK +P R KDYIA PKAN Y+SLH V G +EIQ
Sbjct: 272 ----EKDCYEALSVVHALWKPVPGRFKDYIAMPKANHYQSLHTTV----IGPYGERVEIQ 323
Query: 409 IRTEEMDMLAVNGTASHAFYKGGL 432
IRT+ M A G ASH YK G+
Sbjct: 324 IRTKAMHEWAEEGIASHWRYKEGV 347
>gi|357012698|ref|ZP_09077697.1| RelA [Paenibacillus elgii B69]
Length = 731
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 163/325 (50%), Gaps = 29/325 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA +L ++QMD I A LL VVE VS++ V ++ G A ++ +++ +
Sbjct: 49 LAVADILVNMQMDTTSIIAALLHDVVEDTTVSLETVHEKFGATCAMIVDGLTKLEK---I 105
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + ++ RK F DIR +++ LA RL MR L + Q I+ E ++I
Sbjct: 106 KFKSKEEHQNENYRKMFVAMAQDIRVILIKLADRLHNMRTLKHQSEEAQRRIADETLEIF 165
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ--CL 290
P+AH + + + +E+ED++ RYL P Y + ++ +EQ L
Sbjct: 166 CPIAHRLGISAIKWEMEDIALRYLNPQQYYRIVNLMQKKRAE--------REQYLSDVIA 217
Query: 291 KTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSE 350
L ++ D + GR K YS KK+ + E+ D+L LR+I+ N+
Sbjct: 218 SVGEKLQEMGIDGDISGRPKHIYSIYKKMTVKSKQFNEIYDLLALRIIV---DNI----- 269
Query: 351 VGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIR 410
+ CY T II +LWK MP R KDYIA PK N Y+SLH V + G+ PL E+QIR
Sbjct: 270 ---KDCYATLGIIHTLWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGE--PL-EVQIR 322
Query: 411 TEEMDMLAVNGTASHAFYKGGLTNP 435
T EM + G A+H YK G + P
Sbjct: 323 TFEMHRTSEYGVAAHWAYKEGTSVP 347
>gi|406874357|gb|EKD24330.1| hypothetical protein ACD_81C00051G0002 [uncultured bacterium]
Length = 584
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 113/330 (34%), Positives = 164/330 (49%), Gaps = 27/330 (8%)
Query: 113 ALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHE-----SLRV 167
AL LA +D I+AGLL VE ++ ++ G A L++ L+
Sbjct: 53 VFQTALTLASWDLDTATIAAGLLHDTVEDTSYKLETLQKDFGEEIAFLVNGVTKLGHLKY 112
Query: 168 KNNVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISL 226
+ +V + + ++ A LRK L D+R + + LA RL M L +P +Q I+L
Sbjct: 113 RTSVKTEHERME-HLAENLRKMILAISEDLRVVFVKLADRLHNMTTLGSVPSLKQKRIAL 171
Query: 227 EVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQL 286
E ++I+APLA+ + LS ELEDL+F YL P Y W++ + + Y E++
Sbjct: 172 ETLEIYAPLAYRLGMQNLSGELEDLTFMYLHPEEY----EWMKKNVSEQYEERVQYLERV 227
Query: 287 LQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLV 346
L+T A+ +E + + R K S KKLL+ E++ D + LRVI V
Sbjct: 228 EPLLRTALKKAN-IEPIKIDYRAKRLSSLYKKLLRSDMNLEQIYDFVALRVI-------V 279
Query: 347 NTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLME 406
NT E CY+ ++ LW MP R KDYIA PK NGY+SLH V D + + E
Sbjct: 280 NTVE----ECYSALGMVHQLWPPMPGRIKDYIALPKPNGYKSLHTTVFCED----KRVTE 331
Query: 407 IQIRTEEMDMLAVNGTASHAFYKGGLTNPE 436
IQIRT +M A NG A+H Y T+ E
Sbjct: 332 IQIRTLQMHEEAENGIAAHWAYSQAKTSKE 361
>gi|257896966|ref|ZP_05676619.1| RelA/SpoT protein [Enterococcus faecium Com12]
gi|257833531|gb|EEV59952.1| RelA/SpoT protein [Enterococcus faecium Com12]
Length = 737
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 161/319 (50%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL+MD ++ G L VVE V+++ +R+ G A L+ ++ +
Sbjct: 55 IQVAGILADLKMDPHTVATGFLHDVVEDTEVTLEDLREEFGDDVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK L D+R +++ LA RL MR L +L +Q I+ E ++I+
Sbjct: 112 KYKSHEEQLAENHRKMLLAMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + +++ + ++ E + +
Sbjct: 172 APLAHRLGISRIKWELEDTALRYLNPKQYYRIVHLMQTKREEREKYVNGTVEDIRVATEE 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
A+ + GR K YS +K+ + E+ D+L +RVI+ +
Sbjct: 232 LGIFAE------IYGRPKHIYSIYRKMKDQKKQFNEIYDLLAIRVIVDSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKAN Y+SLH V G +EIQIRT+
Sbjct: 278 ---CYAVLGAIHTKWKPMPGRFKDYIAMPKANMYQSLHTTV----IGPAGNPVEIQIRTQ 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 331 EMHEIAEFGVAAHWAYKEG 349
>gi|404400770|ref|ZP_10992354.1| protein SpoT [Pseudomonas fuscovaginae UPB0736]
Length = 701
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 161/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + ++ + G A L+ V
Sbjct: 46 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALQAQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ + P + ++ K +++ +E L
Sbjct: 163 LEIYAPIANRLGMHAVRIEFEDLGFKAMHPMRSARIYQAVKRARGNRKEIVNKIEESLSH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D + V GR K Y KK+ R E+ DV RVI+ + V+T
Sbjct: 223 CLAVDGIEGE------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRVIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|270291333|ref|ZP_06197555.1| GTP pyrophosphokinase [Pediococcus acidilactici 7_4]
gi|418069368|ref|ZP_12706646.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Pediococcus acidilactici MA18/5M]
gi|270280179|gb|EFA26015.1| GTP pyrophosphokinase [Pediococcus acidilactici 7_4]
gi|357536837|gb|EHJ20865.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Pediococcus acidilactici MA18/5M]
Length = 743
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 169/323 (52%), Gaps = 26/323 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD E +++G L VE +++ V + G A ++ ++ +
Sbjct: 55 IQVAGILANLKMDPETVASGFLHDTVEDTLITLGDVEELFGHDVAVIVDGVSKISK---I 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + ++ A RK L DIR +I+ LA RL MR L +L +Q IS E ++I+
Sbjct: 112 KYKSNQEQLAENHRKLLLAMSQDIRVIIVKLADRLHNMRTLRHLRPDKQRRISNETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + + +ELED++ RYL P Y + + S + I+ +L
Sbjct: 172 APLAERLGISTIKWELEDIALRYLNPQQYYRIVHLMNSRRAQREEYINSAIGEL------ 225
Query: 293 DATLADL-VEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEV 351
+ +ADL ++ V + GR K YS +K++ + ++ D+L +RVI T V
Sbjct: 226 EDAIADLHLKHVDIYGRPKHIYSIYRKMVDQHKQFSQIYDLLAVRVI---------TDTV 276
Query: 352 GERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRT 411
R CY I + WK +P R KDYIA PKAN Y+SLH V V G RPL E QIRT
Sbjct: 277 --RDCYAVLGAIHAKWKPIPGRFKDYIAMPKANMYQSLHTTV-VGPEG--RPL-EFQIRT 330
Query: 412 EEMDMLAVNGTASHAFYKGGLTN 434
E M +A G A+H YK G+T+
Sbjct: 331 EAMHRVAEYGVAAHWAYKEGITD 353
>gi|325275159|ref|ZP_08141130.1| (p)ppGpp synthetase I SpoT/RelA [Pseudomonas sp. TJI-51]
gi|324099706|gb|EGB97581.1| (p)ppGpp synthetase I SpoT/RelA [Pseudomonas sp. TJI-51]
Length = 702
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 159/321 (49%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + + + G A L+ V
Sbjct: 46 VTHPLAVASILADMHMDHQSLMAAMLHDVIEDTGIAKEALSQQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ + P + ++S K ++ + L
Sbjct: 163 LEIYAPIANRLGMHTVRVEFEDLGFKAMHPMRSSLIHRAVKSARGNRKEIVAKIEHSLAN 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D + + GR K Y KK+ R E+ DV RVI+ + V+T
Sbjct: 223 CLAADGIEGE------ISGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRVIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|317495495|ref|ZP_07953863.1| RelA/SpoT family protein [Gemella morbillorum M424]
gi|316914309|gb|EFV35787.1| RelA/SpoT family protein [Gemella morbillorum M424]
Length = 726
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 100/319 (31%), Positives = 160/319 (50%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L +L++D I AG L VVE + + ++ G A ++ ++ +
Sbjct: 55 IQVAGILTELKLDYATICAGFLHDVVEDTKYTFEDIQQTFGEDIAVIVDGVTKLDK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + A RK F D+R + + LA RL MR + Y+ +Q IS E ++I+
Sbjct: 112 KFRSRKQSQAENHRKLFVSIAKDLRVIFVKLADRLHNMRTMKYMREEKQREISSETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED S RYL P Y + ++ + + I C
Sbjct: 172 APLAHRLGISSIKWELEDTSLRYLHPSQYFSIVGMMKQKRSEREESIKD------ACDSI 225
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ L + V GR K YS KK++K + +++ D+L +RV++ ++
Sbjct: 226 TSLLGENNIKAQVTGRPKHIYSIYKKMVKQNKTFDQIYDLLAVRVLVNSVAD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY T ++ +LW +P R KDYIA PK N Y+SLH V ++ +G+T +E+QIRT
Sbjct: 278 ---CYATLGLVNNLWVPIPGRIKDYIAMPKPNMYQSLHTTV-IAPDGQT---LEVQIRTY 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 331 EMHEIAEKGIAAHWAYKEG 349
>gi|398891263|ref|ZP_10644639.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM55]
gi|398186944|gb|EJM74298.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM55]
Length = 701
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 161/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + ++ + G A L+ V
Sbjct: 46 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALQAQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ + P + ++ K +++ +E L
Sbjct: 163 LEIYAPIANRLGMHAIRIEFEDLGFKAMHPMRSARIYQAVKRARGNRKEIVNKIEESLSH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D + V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAIDGIQGE------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|312864406|ref|ZP_07724639.1| GTP diphosphokinase [Streptococcus downei F0415]
gi|311100127|gb|EFQ58338.1| GTP diphosphokinase [Streptococcus downei F0415]
Length = 766
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 172/331 (51%), Gaps = 26/331 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +LA LQ+DA ++ G L VVE V+++ + G+ + ++ ++
Sbjct: 77 IVHPIQVAGILAGLQLDAVTVACGFLHDVVEDTEVTLEDLERDFGLKVSQIVDGVTKLGK 136
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+K + +++ A RK + DIR +++ LA RL MR L +L +Q IS E
Sbjct: 137 ---VKYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRPDKQKRISRET 193
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLAH + + + +ELEDL+FRYL + + + + L+D ++++
Sbjct: 194 MEIYAPLAHRLGISAIKWELEDLAFRYLNEAEFYKISHMMHEKRRERESLVD----EIVE 249
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+K A A+ + GR K YS +K+ + +++ D++ +R I+ S++
Sbjct: 250 KIK--AYTAEQGLQGKIYGRPKHIYSIYRKMRDKRKRFDQIYDLIAIRCIMDTPSDV--- 304
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
Y I LW+ MP R KDYIA PK+NGY+S+H V G P+ EIQ
Sbjct: 305 --------YAMLGYIHELWRPMPGRFKDYIANPKSNGYQSIHTTV----YGPKGPI-EIQ 351
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAK 439
IRT+EM +A G A+H YK G+ +A+
Sbjct: 352 IRTQEMHEVAEYGVAAHWAYKKGIKGKVDAQ 382
>gi|337280958|ref|YP_004620430.1| GTP pyrophosphokinase [Ramlibacter tataouinensis TTB310]
gi|334732035|gb|AEG94411.1| candidate GTP pyrophosphokinase (GTP pyrophosphokinase)
[Ramlibacter tataouinensis TTB310]
Length = 753
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 176/333 (52%), Gaps = 25/333 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++VA A+ ++DA+ + A LL +E GV+ ++ +R G A L+ ++
Sbjct: 70 ITHPIAVAAQCAEWKLDAQALMAALLHDAIEDCGVTKPELIERFGAPVAELVDGLTKLDK 129
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+ ++ A + RK L D+R +++ LA R MR LD +PR + IS E
Sbjct: 130 ---LQFNTREENQAESFRKMLLAMARDVRVILIKLADRTHNMRTLDDVPREKWTRISSET 186
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+AH + N EL++LSFR+L P+ Y + + + + LI + ++
Sbjct: 187 LEIYAPIAHRLGLNQTYRELQELSFRHLKPWRYQVLSKAVTKARSRRRDLIQKVQREVEA 246
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ A +A + + GR K+ YS +K+ + +V D+ G RV++ PS +++
Sbjct: 247 AFEA-AGIA-----IRLAGREKTLYSIYRKMDEKHLSFAQVTDIYGFRVVV-PS--VID- 296
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CYT I+ ++K +P R KD+IA PK NGY+SLH + V +G +E Q
Sbjct: 297 -------CYTALGILHQMYKPVPGRFKDHIAIPKVNGYQSLHTTL-VGPSGVN---VEFQ 345
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRL 441
+RTE M ++A +G A+H YK + A+RL
Sbjct: 346 MRTEAMHVVAESGVAAHWLYKASPPEADTAERL 378
>gi|83648950|ref|YP_437385.1| guanosine polyphosphate pyrophosphohydrolase/synthetase-like
protein [Hahella chejuensis KCTC 2396]
gi|83636993|gb|ABC32960.1| Guanosine polyphosphate pyrophosphohydrolase/synthetases [Hahella
chejuensis KCTC 2396]
Length = 709
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 170/335 (50%), Gaps = 26/335 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA LLADLQ+D + ++A +L V+E G+ + + G A L+ V
Sbjct: 46 ITHPLAVANLLADLQLDHQCLAAAMLHDVIEDTGIPKDALSSQFGESIAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ + + A +K L DIR +++ LA RL MR L L ++ I+ E
Sbjct: 103 LTQIEFKSKAEAQAENFQKMTLAMAKDIRVILVKLADRLHNMRTLGPLKPEKRRRIATET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+AP+A+ + + + ELEDL F+ +FP ++ +R +I+ K +L
Sbjct: 163 LDIYAPIANRLGIHTMCVELEDLGFQAMFPMRAKYIQEAVRKLRGTHYEIIEEIKHKLEG 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
LK V +QGR K +S +K+ R ++ DV R+I T
Sbjct: 223 KLKERGL------SVRIQGREKHLHSIYQKMKAKRRSFHDIMDVYAFRII---------T 267
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
V +CY T ++ ++K +P R KDYIA PKANGY+S+H + S +EIQ
Sbjct: 268 DSVD--SCYRTLGVVHGMYKPVPGRFKDYIALPKANGYQSIHTTLFGSHVN-----IEIQ 320
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKA 443
IRTEEMD +A +G A+H YK ++ + ++++A
Sbjct: 321 IRTEEMDKVANSGIAAHWVYKSATSDLADNQQMRA 355
>gi|379735759|ref|YP_005329265.1| putative GTP pyrophosphokinase [Blastococcus saxobsidens DD2]
gi|378783566|emb|CCG03234.1| putative GTP pyrophosphokinase [Blastococcus saxobsidens DD2]
Length = 817
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 108/321 (33%), Positives = 164/321 (51%), Gaps = 27/321 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LA L MD + A LL VE GV+++ + G AHL+ ++
Sbjct: 128 ITHPLAVATILAGLGMDTTTLIAALLHDTVEDTGVTLETITTDFGSEVAHLVDGVTKID- 186
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
K+++ D A +RK + D R L++ LA RL MR L +LP +Q + E
Sbjct: 187 ----KVKLGDAAQAETIRKMIVAMSRDPRVLVIKLADRLHNMRTLRFLPPEKQERKARET 242
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I APLAH + N + +ELEDL+F L+P Y D +R P D Y ++
Sbjct: 243 LEILAPLAHRLGMNTIKWELEDLAFATLYPKRY---DEIVRLVAE-RAPSRDTYLAEVTT 298
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ D A +E V V GR K YS +K++ GR ++ D++G+R+++
Sbjct: 299 TVN-DQLKAAKIEAV-VTGRPKHYYSIYQKMIVRGRDFTDIWDLVGIRILVD-------- 348
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY I+ + W+ +P R KD++A PK N Y+SLH V + GK +E+Q
Sbjct: 349 ---SVRDCYAALGIMHAHWQPVPGRFKDFVAMPKFNMYQSLHTTV-IGPQGKP---VELQ 401
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT +M A G A+H YK
Sbjct: 402 IRTHDMHRTAEYGIAAHWKYK 422
>gi|451819384|ref|YP_007455585.1| GTP pyrophosphokinase RelA [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451785363|gb|AGF56331.1| GTP pyrophosphokinase RelA [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 737
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 109/339 (32%), Positives = 170/339 (50%), Gaps = 44/339 (12%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
++VA +LA+L MD I AGLL V+E S ++ +L+ ++ +
Sbjct: 48 IAVAEILAELGMDTNTIVAGLLHDVIEDTEFSYEETVKLFNEEIGNLIEGVTKLTRLGEM 107
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A +RK L DIR +I+ LA RL MR L ++P +Q + E + I+
Sbjct: 108 EYKTKEEQQADNVRKMLLAMAKDIRVIIIKLADRLHNMRTLKFMPEKKQKNKAKETLDIY 167
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELEDL FRYL HE L+D E+ ++
Sbjct: 168 APLAHRLGMSKIKWELEDLCFRYL--------------HEKEYYELVDSIAEKRVE---R 210
Query: 293 DATLADLVEDV-----------SVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKP 341
+ + D+V+D+ + GR K YS KK++ + E++ D+ +R+
Sbjct: 211 ETYIKDIVDDLYAKLQAAGIESDIDGRPKHFYSIYKKMVNKNKSIEQIFDLTAIRI---- 266
Query: 342 SSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKT 401
LVN+ + CY I+ ++++ +P R KDYIA PK N Y+SLH V + GKT
Sbjct: 267 ---LVNSV----KDCYGVLGIVHTIYRPIPGRFKDYIAMPKPNMYQSLHTTV-IGPQGKT 318
Query: 402 RPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKR 440
EIQIRT EM A G A+H YK G T+ E K+
Sbjct: 319 ---FEIQIRTFEMHKTAEYGIAAHWKYKEGDTSKGEDKQ 354
>gi|398870384|ref|ZP_10625722.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM74]
gi|398208693|gb|EJM95403.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM74]
Length = 701
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 161/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + ++ + G A L+ V
Sbjct: 46 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALQAQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ + P + ++ K +++ +E L
Sbjct: 163 LEIYAPIANRLGMHAIRIEFEDLGFKAMHPMRSARIYQAVKRARGNRKEIVNKIEESLSH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D + V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAIDGIQGE------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|299822818|ref|ZP_07054704.1| GTP diphosphokinase [Listeria grayi DSM 20601]
gi|299816347|gb|EFI83585.1| GTP diphosphokinase [Listeria grayi DSM 20601]
Length = 740
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 164/321 (51%), Gaps = 29/321 (9%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD +++G L VVE V++ ++ G A L+ ++ +
Sbjct: 57 IQVAGILAELRMDPSTVASGFLHDVVEDTPVTLDDLKAEFGEEVAMLVDGVTKLGK---I 113
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP +Q I+ E ++I
Sbjct: 114 KYKSHEEQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPTQKQRRIANETLEIF 173
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCL-- 290
APLAH + + + +ELED + RYL P Y + +R +E+ LQ +
Sbjct: 174 APLAHRLGISRVKWELEDTALRYLNPQQYYRIVHLMRQKRDE--------RERYLQDVID 225
Query: 291 KTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSE 350
+ L +L + GR K YS +K+ + E+ D+L +R+I+ +
Sbjct: 226 GVNDNLEELNIQADITGRPKHIYSIYRKMSIQQKQFNEIYDLLAVRIIVSSIKD------ 279
Query: 351 VGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIR 410
CY II + WK MP R KDYIA PK+N Y+S+H V + G+ PL E+QIR
Sbjct: 280 -----CYAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTV-IGPQGE--PL-EVQIR 330
Query: 411 TEEMDMLAVNGTASHAFYKGG 431
T EM +A G A+H YK G
Sbjct: 331 TTEMHQIAEYGVAAHWAYKEG 351
>gi|398953568|ref|ZP_10675432.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM33]
gi|398153743|gb|EJM42237.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM33]
Length = 701
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 161/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + ++ + G A L+ V
Sbjct: 46 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALQAQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ + P + ++ K +++ +E L
Sbjct: 163 LEIYAPIANRLGMHAIRIEFEDLGFKAMHPMRSARIYQAVKRARGNRKEIVNKIEESLSH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D + V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAIDGIQGE------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|339325054|ref|YP_004684747.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Cupriavidus necator N-1]
gi|338165211|gb|AEI76266.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase SpoT
[Cupriavidus necator N-1]
Length = 844
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 169/321 (52%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++VA L AD ++D + I A LL V+E G++ ++ ++ G A L+ ++
Sbjct: 168 ITHPVAVAELCADWKLDVQSIMAALLHDVMEDQGITKSELAEKFGPKVAELVDGLTKLDK 227
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+ Q + A + RK L D+R +++ LA R MR LD++P ++ I+LE
Sbjct: 228 ---LEFQSREQAQAESFRKMLLAMARDVRVILVKLADRTHNMRTLDFVPPEKRRRIALET 284
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+AP+AH + N + EL++LSF+ PF Y ++ +++ + ++ +++L+
Sbjct: 285 MEIYAPIAHRLGLNTIYRELQELSFKVGSPFRYATLEKAVKAARGNRREVV----KRILE 340
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ A +V ++S GR K+ YS +K+ +V DV G RV+++ +
Sbjct: 341 AAQKGLADAGIVAELS--GREKTLYSIYRKMHDKQLSFSQVLDVYGFRVVVETQMH---- 394
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + L+K MP + KDYIA PK NGY+SLH + V G +E Q
Sbjct: 395 -------CYMAMGALHGLYKPMPGKFKDYIAIPKINGYQSLHTTL-VGPFGTP---VEFQ 443
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT +M +A G A+H YK
Sbjct: 444 IRTRDMHQIAEAGVAAHWMYK 464
>gi|91977118|ref|YP_569777.1| RelA/SpoT family protein [Rhodopseudomonas palustris BisB5]
gi|91683574|gb|ABE39876.1| RelA/SpoT family protein [Rhodopseudomonas palustris BisB5]
Length = 762
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 165/329 (50%), Gaps = 25/329 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ L VA +L +L++D I A LL +E + ++ G L+ ++K
Sbjct: 83 FSHPLEVAAILTNLKLDDATIVAALLHDTIEDTEATRTEIDKLFGHEIGALVEGLTKLKR 142
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+L + + A LRK L D +R L++ LA RL MR LD++P + I+ E
Sbjct: 143 ---LELVSREAKQAENLRKLLLAIADDVRVLLIKLADRLHNMRTLDFVPPASRQRIAEET 199
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+APLA + + ELEDLSFR L P ++ V L + ++ LI + QL
Sbjct: 200 LDIYAPLAGRMGMQEMREELEDLSFRTLDPEAFTVVMQRLDALAERNRNLIGEIETQLSA 259
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L + A+ V GR K +S K+ + E+++D+ G RV++ N
Sbjct: 260 NLGKNGITAE------VTGRRKRPFSIWTKMERKSVGFEQLSDIYGFRVVL-------ND 306
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
E ACY ++ + W +P R KDYI+ PK N YRSLH V G + +E+Q
Sbjct: 307 VE----ACYRALGVVHTTWPMVPGRFKDYISTPKQNDYRSLHTTV----IGPGQQRVELQ 358
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
RT++M+ +A G A+HAFYK G+ +P E
Sbjct: 359 FRTQDMNQIAEYGIAAHAFYKDGVGSPTE 387
>gi|292490886|ref|YP_003526325.1| RelA/SpoT family protein [Nitrosococcus halophilus Nc4]
gi|291579481|gb|ADE13938.1| RelA/SpoT family protein [Nitrosococcus halophilus Nc4]
Length = 717
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 103/323 (31%), Positives = 164/323 (50%), Gaps = 25/323 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA ++A++ MD + I A LL V+E GVS ++ A L+ V
Sbjct: 54 ITHPLAVAAIMAEMYMDHQCIMAALLHDVLEDTGVSKTELSQYFSEEVAELVDG---VSK 110
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A LRK L DIR ++L LA RL MR L Y+ R +Q I+ E
Sbjct: 111 LAQINVTSREHAQAENLRKMLLAMTRDIRVILLKLADRLHNMRTLRYVAREKQRRIAHET 170
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + N + EL+ L F+ L+P Y ++ +R K ++ ++ + Q
Sbjct: 171 LEIYAPIANRLGMNNIRKELQGLGFQALYPLRYRVLEAAVRRARGNRKEIVRGIQDGIAQ 230
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L + +E + V+GR KS YS K+ R EV D+ R+++ +
Sbjct: 231 RLAQEG-----LEGI-VEGREKSLYSLYVKMRDKHRSLSEVMDLYAFRIVVDSADT---- 280
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY ++ +L+K +P + KDYIA PKANGY++LH + G +E+Q
Sbjct: 281 -------CYRALGVVHNLYKPVPGKFKDYIAIPKANGYQALHTVL----FGPYGVPIEVQ 329
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IRT +MD +A G A+H YK G
Sbjct: 330 IRTHDMDRVAEAGIAAHWLYKSG 352
>gi|398867509|ref|ZP_10622966.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM78]
gi|398236647|gb|EJN22422.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM78]
Length = 701
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 161/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + ++ + G A L+ V
Sbjct: 46 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALQAQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ + P + ++ K +++ +E L
Sbjct: 163 LEIYAPIANRLGMHAIRIEFEDLGFKAMHPMRSARIYQAVKRARGNRKEIVNKIEESLSH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D + V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAIDGIQGE------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|16330670|ref|NP_441398.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
gi|383322412|ref|YP_005383265.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383325581|ref|YP_005386434.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383491465|ref|YP_005409141.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384436732|ref|YP_005651456.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
gi|451814828|ref|YP_007451280.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
gi|6647853|sp|P74007.1|SPOT_SYNY3 RecName: Full=Probable guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase; AltName: Full=Penta-phosphate
guanosine-3'-pyrophosphohydrolase; Short=(ppGpp)ase
gi|1653162|dbj|BAA18078.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
gi|339273764|dbj|BAK50251.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
gi|359271731|dbj|BAL29250.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359274901|dbj|BAL32419.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359278071|dbj|BAL35588.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407958589|dbj|BAM51829.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
gi|451780797|gb|AGF51766.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
Length = 760
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 112/327 (34%), Positives = 161/327 (49%), Gaps = 24/327 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ ++VA LL DL D +I+AG L VVE +SI+Q+ G TA L+ E + +
Sbjct: 77 IAHPVAVAGLLRDLGGDEAMIAAGFLHDVVEDTDISIEQIEALFGEETASLV-EGVTKLS 135
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVM 229
N + + R F DIR +++ LA RL MR LD L +Q I+ E
Sbjct: 136 KFNFS-STTEHQAENFRRMFLAMAKDIRVIVVKLADRLHNMRTLDALSPEKQRRIARETK 194
Query: 230 KIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQC 289
I APLA+ + +ELEDLSF+YL P SY + + + + ++ K+ L
Sbjct: 195 DIFAPLANRLGIWRFKWELEDLSFKYLEPDSYRKIQSLVVEKRGDRESRLETVKDMLRFR 254
Query: 290 LKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTS 349
L+ + +E +QGR K Y K+ + EE+ D+ LR+I++
Sbjct: 255 LRDEG-----IEHFELQGRPKHLYGIYYKMTSQDKAFEEIYDIAALRIIVESK------- 302
Query: 350 EVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQI 409
GE CY ++ ++K +P R KDYI PK N Y+SLH V G T +EIQI
Sbjct: 303 --GE--CYRALSVVHDVFKPIPGRFKDYIGLPKPNRYQSLHTTV----LGLTSRPLEIQI 354
Query: 410 RTEEMDMLAVNGTASHAFYK--GGLTN 434
RTEEM +A G A+H YK GG N
Sbjct: 355 RTEEMHHVAEYGIAAHWKYKESGGSEN 381
>gi|195941929|ref|ZP_03087311.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (spoT)
[Borrelia burgdorferi 80a]
gi|216264440|ref|ZP_03436432.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
((ppGpp)ase) [Borrelia burgdorferi 156a]
gi|221217528|ref|ZP_03588998.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
((ppGpp)ase) [Borrelia burgdorferi 72a]
gi|224532862|ref|ZP_03673477.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Borrelia
burgdorferi WI91-23]
gi|224534048|ref|ZP_03674631.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Borrelia
burgdorferi CA-11.2a]
gi|225548542|ref|ZP_03769590.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Borrelia
burgdorferi 94a]
gi|225549790|ref|ZP_03770754.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Borrelia
burgdorferi 118a]
gi|226320939|ref|ZP_03796487.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Borrelia
burgdorferi 29805]
gi|387825852|ref|YP_005805305.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Borrelia
burgdorferi JD1]
gi|387827114|ref|YP_005806396.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Borrelia
burgdorferi N40]
gi|27802074|gb|AAL71860.1| (p)ppGpp synthase/pyrophosphohydrolase [Borrelia burgdorferi N40]
gi|215980913|gb|EEC21720.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
((ppGpp)ase) [Borrelia burgdorferi 156a]
gi|221192591|gb|EEE18808.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
((ppGpp)ase) [Borrelia burgdorferi 72a]
gi|224512251|gb|EEF82637.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Borrelia
burgdorferi WI91-23]
gi|224512747|gb|EEF83115.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Borrelia
burgdorferi CA-11.2a]
gi|225369598|gb|EEG99047.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Borrelia
burgdorferi 118a]
gi|225370805|gb|EEH00240.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Borrelia
burgdorferi 94a]
gi|226233641|gb|EEH32374.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Borrelia
burgdorferi 29805]
gi|312147758|gb|ADQ30417.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Borrelia
burgdorferi JD1]
gi|312149662|gb|ADQ29733.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Borrelia
burgdorferi N40]
Length = 667
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 173/353 (49%), Gaps = 41/353 (11%)
Query: 86 LFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVS 145
+FKAL+++ L + + V+L LA Q+D + AGLL V+E V
Sbjct: 40 IFKALEIA-EQLHYGQYRESGEPYIIHPIMVSLFLAKFQLDFKATIAGLLHDVLEDTNVE 98
Query: 146 IQQVRDRI---------GIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRKFCLTYYDI 196
+++ G+ H LH R N ++ F +T+ DI
Sbjct: 99 KEEIVKEFDEEILSLIDGVTKIHDLHNKTRSIKEANTISKMF----------FAMTH-DI 147
Query: 197 RALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYL 256
R +I+ LA +L M L YLP+ +Q I+ + + + P+A + + L LEDLSF++L
Sbjct: 148 RIIIIKLADKLHNMTTLSYLPKNRQDRIAKDCLSTYVPIAERLGISSLKTYLEDLSFKHL 207
Query: 257 FPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTM 316
+P Y + +L ET + +YK +L ++ + + + +++V R K YS
Sbjct: 208 YPKDYKEIKNFLS--ETKIEREKKLYKGKL--SIEKELQKSGIEAEITV--RSKHFYSIF 261
Query: 317 KKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKD 376
+K+ ++ D LG+R+I K ++ CY EI+ +WK +P R KD
Sbjct: 262 RKMQTRTNKLTQIFDTLGIRIICKK-----------QKECYEILEIVHRVWKPIPGRLKD 310
Query: 377 YIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYK 429
YIA PK N Y+SLH V + ++ + L+EIQIRTEEMD +A G A+H YK
Sbjct: 311 YIASPKENKYQSLHTTVRIPEDNQ---LIEIQIRTEEMDRIANYGVAAHWIYK 360
>gi|167036336|ref|YP_001671567.1| (p)ppGpp synthetase I SpoT/RelA [Pseudomonas putida GB-1]
gi|166862824|gb|ABZ01232.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudomonas putida GB-1]
Length = 702
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 159/321 (49%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + + + G A L+ V
Sbjct: 46 VTHPLAVASILADMHMDHQSLMAAMLHDVIEDTGIAKEALSQQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ + P + ++S K ++ + L
Sbjct: 163 LEIYAPIANRLGMHTVRVEFEDLGFKAMHPMRSSLIHRAVKSARGNRKEIVAKIEHSLAN 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D + V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAADGIEGE------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|212696222|ref|ZP_03304350.1| hypothetical protein ANHYDRO_00758 [Anaerococcus hydrogenalis DSM
7454]
gi|212676851|gb|EEB36458.1| hypothetical protein ANHYDRO_00758 [Anaerococcus hydrogenalis DSM
7454]
Length = 726
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 163/321 (50%), Gaps = 33/321 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
++VA ++++Q+D + I AGL+ V+E VS Q+RD G L+ ++K L
Sbjct: 55 IAVATTISNMQLDDQTICAGLMHDVLEDTPVSKDQMRDLFGEEITFLVDGVTKLKK---L 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ +++ A +RK L DIR +++ LA RL MR L+Y +Q + E ++I+
Sbjct: 112 NYKTREEKQAENIRKMVLAMSNDIRVILIKLADRLHNMRTLEYKTEKKQKQTASETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYL----FVDTWLRSHETGSKPLIDIYKEQLLQ 288
PLAH + + +ELEDL FRY P Y V R E Y ++++
Sbjct: 172 VPLAHRLGIYTMKWELEDLCFRYQKPEEYYELAQMVHNKRREREN--------YINEIIE 223
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L D +L+ + + GR K +S KK+ ++ E+ D+ +RV++ ++
Sbjct: 224 TL--DKSLSSSKINYEISGRPKGLFSIYKKMSRNKIEFNEIYDLTAVRVLVDTVAD---- 277
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + S+W+ +P+R KDYI +PK NGYRSLH V +D ++P E+Q
Sbjct: 278 -------CYEVLGKVHSIWRPIPNRIKDYIGQPKPNGYRSLHTTVFGAD---SKPF-EVQ 326
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT +M G A+H YK
Sbjct: 327 IRTRQMHYECEYGIAAHWKYK 347
>gi|389680359|ref|ZP_10171709.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [Pseudomonas
chlororaphis O6]
gi|399004864|ref|ZP_10707468.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM17]
gi|425902343|ref|ZP_18878934.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
gi|388555464|gb|EIM18707.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [Pseudomonas
chlororaphis O6]
gi|397881991|gb|EJK98479.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
gi|398128232|gb|EJM17625.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM17]
Length = 701
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 161/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + ++ + G A L+ V
Sbjct: 46 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALQAQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ + P + ++ K +++ +E L
Sbjct: 163 LEIYAPIANRLGMHSIRIEFEDLGFKAMHPMRSARIYQAVKRARGNRKEIVNKIEESLSH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D + V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAIDGIQGE------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|225551913|ref|ZP_03772853.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Borrelia
sp. SV1]
gi|225370911|gb|EEH00341.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Borrelia
sp. SV1]
Length = 667
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 173/353 (49%), Gaps = 41/353 (11%)
Query: 86 LFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVS 145
+FKAL+++ L + + V+L LA Q+D + AGLL V+E V
Sbjct: 40 IFKALEIA-EQLHYGQYRESGEPYIIHPIMVSLFLAKFQLDFKATIAGLLHDVLEDTNVE 98
Query: 146 IQQVRDRI---------GIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRKFCLTYYDI 196
+++ G+ H LH R N ++ F +T+ DI
Sbjct: 99 KEEIVKEFDEEILSLIDGVTKIHDLHNKTRSIKEANTISKMF----------FAMTH-DI 147
Query: 197 RALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYL 256
R +I+ LA +L M L YLP+ +Q I+ + + + P+A + + L LEDLSF++L
Sbjct: 148 RIIIIKLADKLHNMTTLSYLPKNRQDRIAKDCLSTYVPIAERLGISSLKTYLEDLSFKHL 207
Query: 257 FPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTM 316
+P Y + +L ET + +YK +L ++ + + + +++V R K YS
Sbjct: 208 YPKDYKEIKNFLS--ETKIEREKKLYKGKL--SIEKELQKSGIEAEITV--RSKHFYSIF 261
Query: 317 KKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKD 376
+K+ ++ D LG+R+I K ++ CY EI+ +WK +P R KD
Sbjct: 262 RKMQARTNKLTQIFDTLGIRIICKK-----------QKECYEILEIVHRVWKPIPGRLKD 310
Query: 377 YIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYK 429
YIA PK N Y+SLH V + ++ + L+EIQIRTEEMD +A G A+H YK
Sbjct: 311 YIASPKENKYQSLHTTVRIPEDNQ---LIEIQIRTEEMDRIANYGVAAHWIYK 360
>gi|409427140|ref|ZP_11261667.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pseudomonas sp. HYS]
Length = 702
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 160/321 (49%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + + + G A L+ V
Sbjct: 46 VTHPLAVASILADMHMDHQSLMAAMLHDVIEDTGIAKEALSSQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ + P + ++ K +++ +E L
Sbjct: 163 LEIYAPIANRLGMHSVRVEFEDLGFKAMHPMRSARIYQAVKRARGNRKEIVNKIEESLAH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D + V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAVDGIEGE------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|222148078|ref|YP_002549035.1| GTP pyrophosphohydrolases/synthetases RelA/SpoT family
[Agrobacterium vitis S4]
gi|221735066|gb|ACM36029.1| GTP pyrophosphohydrolases/synthetases RelA/SpoT family
[Agrobacterium vitis S4]
Length = 746
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 161/321 (50%), Gaps = 24/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ L VA +L ++ +D I+ LL +E + ++ + G L+ ++K
Sbjct: 46 ISHPLEVAAILTEMHLDESTIAVALLHDTIEDTTATRAEIDELFGEDIGRLVEGLTKLKK 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L L + A LRK L D +R L++ LA RL MR L+++ ++ IS E
Sbjct: 106 ---LDLVTKKAKQAENLRKLLLAISDDVRVLLVKLADRLHNMRTLEHMRPDKRARISEET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLA + + ELEDLSFRY+ P +Y V L ++ LI +++L +
Sbjct: 163 MEIYAPLAGRMGMQDMRDELEDLSFRYINPEAYETVTKRLEELSRRNEGLIKKIEDELSE 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L + L SV+GR K YS +K+ E+++DV G R+++
Sbjct: 223 LLVANGLL-----QASVKGRQKKPYSVFRKMQSKSLSFEQLSDVYGFRILVD-------- 269
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
G ACY I+ + W+ +P R KDYI+ PK N YRSLH + G +R +E+Q
Sbjct: 270 ---GVAACYRALGIVHTRWRVVPGRFKDYISTPKQNDYRSLHTTI----VGPSRQRIELQ 322
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT M +A G A+HA YK
Sbjct: 323 IRTHRMHEIAEYGIAAHALYK 343
>gi|383827879|ref|ZP_09982968.1| (p)ppGpp synthetase, RelA/SpoT family [Saccharomonospora
xinjiangensis XJ-54]
gi|383460532|gb|EID52622.1| (p)ppGpp synthetase, RelA/SpoT family [Saccharomonospora
xinjiangensis XJ-54]
Length = 782
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 167/321 (52%), Gaps = 27/321 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LA+L MD + A LL VE G S++Q+ D G A L+ ++
Sbjct: 102 ITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYSVEQLTDEFGEKVAQLVDGVTKLD- 160
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
K+++ A +RK + D R L++ LA RL MR + +LP +Q + E
Sbjct: 161 ----KVKLGTAAEAETIRKMVIAMARDPRVLVIKLADRLHNMRTMRFLPPEKQARKAKET 216
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+++ APLAH + + +ELEDL+F L P Y D +R P D Y ++
Sbjct: 217 LEVLAPLAHRLGMATVKWELEDLAFAILQPKKY---DEIVRL-VADRAPSRDTYLRWVIG 272
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L + L V+GR K YS +K++ GR ++++D++G+R+++
Sbjct: 273 ELTRQLEESRL--SAKVEGRPKHYYSIHQKMIVRGRDLDDIHDLVGVRILV--------- 321
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
EV R CY ++ +LW+ MP R KDYIA+P+ Y+SLH V + +GK PL E+Q
Sbjct: 322 DEV--RDCYAAMGVVHALWQPMPGRFKDYIAQPRFGVYQSLHTTV-IGPDGK--PL-EVQ 375
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM A G A+H YK
Sbjct: 376 IRTHEMHRTAEYGIAAHWRYK 396
>gi|104784343|ref|YP_610841.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pseudomonas entomophila L48]
gi|95113330|emb|CAK18058.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pseudomonas entomophila L48]
Length = 702
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 163/329 (49%), Gaps = 28/329 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + + + G A L+ V
Sbjct: 46 VTHPLAVASILADMHMDHQSLMAAMLHDVIEDTGIAKEALSQQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ + P + ++S K ++ + L
Sbjct: 163 LEIYAPIANRLGMHTVRVEFEDLGFKAMHPMRSSLIHRAVKSARGNRKEIVAKIETSLAN 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D + V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAADGIEGE------VSGRQKHLYGIYKKMRGKRRAFTEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
IRT EM+ +A NG A+H YK +N EE
Sbjct: 322 IRTREMEEMANNGIAAHWLYK---SNEEE 347
>gi|373454718|ref|ZP_09546582.1| RelA/SpoT family protein [Dialister succinatiphilus YIT 11850]
gi|371935581|gb|EHO63326.1| RelA/SpoT family protein [Dialister succinatiphilus YIT 11850]
Length = 800
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 160/323 (49%), Gaps = 33/323 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA +LA+L+MD + I A LL VVE +++ ++ G A L+ ++
Sbjct: 123 LAVAYILAELEMDPQGIMAALLHDVVEDTEYTLEDIKMMFGEEVAFLVDGVTKLSQ---F 179
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ +D+ RK F DIR +++ LA RL MR L R +Q I+ E ++I+
Sbjct: 180 HYKDKEDQQLENFRKMFLAMAKDIRVVVIKLADRLHNMRTLGVFRREKQQRIAKETIEIY 239
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + +ELEDL F YL P Y + ++ + +++ T
Sbjct: 240 APLAHRLGIYNIKWELEDLCFHYLHPEEYYDLVRQMKQKRKAREEIVN----------DT 289
Query: 293 DATLADLVEDVSVQ----GRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L D +E+ ++ GR K YS KK+ +D + ++ D+ +RVI+
Sbjct: 290 MRVLHDHIEEAGIKATITGRPKHFYSIYKKMKRDNKDLSQIYDLYAVRVIVDTIPQ---- 345
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY I SLWK +P+R KDYIA PK N Y+SLH V + G+ +EIQ
Sbjct: 346 -------CYAVLGIAHSLWKPLPNRFKDYIAVPKPNMYQSLHTTV-IGTRGQP---VEIQ 394
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IRT EM ++ G A+H YK G
Sbjct: 395 IRTWEMHHISEYGVAAHWRYKEG 417
>gi|170719358|ref|YP_001747046.1| (p)ppGpp synthetase I SpoT/RelA [Pseudomonas putida W619]
gi|169757361|gb|ACA70677.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudomonas putida W619]
Length = 702
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 159/321 (49%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + + + G A L+ V
Sbjct: 46 VTHPLAVASILADMHMDHQSLMAAMLHDVIEDTGIAKEALSQQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ + P + ++S K ++ + L
Sbjct: 163 LEIYAPIANRLGMHTVRVEFEDLGFKAMHPMRSSLIHRAVKSARGNRKEIVAKIEHSLAN 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D + V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAADGIQGE------VSGRQKHLYGIYKKMRGKRRAFTEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|424925644|ref|ZP_18349005.1| (p)ppGpp synthetase [Pseudomonas fluorescens R124]
gi|404306804|gb|EJZ60766.1| (p)ppGpp synthetase [Pseudomonas fluorescens R124]
Length = 701
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 161/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + ++ + G A L+ V
Sbjct: 46 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALQAQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ + P + ++ K +++ +E L
Sbjct: 163 LEIYAPIANRLGMHAIRIEFEDLGFKAMHPMRSARIYQAVKRARGNRKEIVNKIEESLGH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D + V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAIDGIQGE------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|302387920|ref|YP_003823742.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium saccharolyticum WM1]
gi|302198548|gb|ADL06119.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium saccharolyticum WM1]
Length = 774
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 162/316 (51%), Gaps = 22/316 (6%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L VA++LADL+MD E I+AG+L VVE +S+ +++ G A LL + + ++
Sbjct: 88 LCVAIILADLEMDKETIAAGILHDVVEDTIMSLDELKAEFGEEVA-LLVDGVTKLTQISW 146
Query: 174 KLQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHA 233
+ ++ + + F DIR +I+ LA RL MR L Y+ +Q + E M+I+A
Sbjct: 147 SMDKMEIQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLQYMKPEKQKEKAKETMEIYA 206
Query: 234 PLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTD 293
P+AH + + + EL+DLS RYL P Y + + + + + +++ L++
Sbjct: 207 PIAHRLGISKIKIELDDLSLRYLQPEIYYELAEKISLKKDARETFVKSIVDEVQDHLRSG 266
Query: 294 ATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGE 353
A V GR K +S KK++ + +++ D+ +R+I+ +
Sbjct: 267 GIEA------RVDGRVKHFFSIYKKMVNQNKTLDQIYDLFAVRIIVDSVKD--------- 311
Query: 354 RACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEE 413
CY +I ++K +P R KDYIA PK N Y+SLH + + +NG+ EIQIRT E
Sbjct: 312 --CYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTL-IGNNGQP---FEIQIRTYE 365
Query: 414 MDMLAVNGTASHAFYK 429
M A G A+H YK
Sbjct: 366 MHRTAEYGIAAHWKYK 381
>gi|405380031|ref|ZP_11033875.1| (p)ppGpp synthetase, RelA/SpoT family [Rhizobium sp. CF142]
gi|397323436|gb|EJJ27830.1| (p)ppGpp synthetase, RelA/SpoT family [Rhizobium sp. CF142]
Length = 744
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 166/335 (49%), Gaps = 38/335 (11%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ L VA +L D+ +D I+ LL +E + ++ + G L+ ++K
Sbjct: 46 ISHPLEVAAILTDMHLDESTIAVALLHDTIEDTTATRAEIDELFGEDIGRLVEGLTKIKK 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L L + A LRK L D +R L++ LA RL MR LD++ + ++ IS E
Sbjct: 106 ---LDLVTKKAKQAENLRKLLLAISDDVRVLLVKLADRLHNMRTLDHMSQEKRARISEET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLA + + ELE+LSFR++ P +Y ET +K L ++ K
Sbjct: 163 MEIYAPLAGRMGMQDMREELEELSFRHMNPEAY----------ETVTKRLEELSKRNEGL 212
Query: 289 CLKTDATLADL-----VEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIK--P 341
K +A L DL + V+GR K YS +K+ E+++DV G R+I++ P
Sbjct: 213 VKKIEAELRDLLIANGLTTAYVKGRQKKPYSVFRKMQSKSLSFEQLSDVYGFRLIVEDIP 272
Query: 342 SSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKT 401
S CY I+ + W+ +P R KDYI+ PK N YRSLH + G +
Sbjct: 273 S-------------CYRALGIVHTRWRVVPGRFKDYISTPKQNDYRSLHTTI----VGPS 315
Query: 402 RPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNPE 436
+E+QIRT+ M +A G A+H YK G TN +
Sbjct: 316 MQRIELQIRTKRMHEIAEFGIAAHTLYKDGATNAD 350
>gi|398963383|ref|ZP_10679552.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM30]
gi|398149893|gb|EJM38527.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM30]
Length = 701
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 161/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + ++ + G A L+ V
Sbjct: 46 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALQAQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ + P + ++ K +++ +E L
Sbjct: 163 LEIYAPIANRLGMHAIRIEFEDLGFKAMHPMRSARIYQAVKRARGNRKEIVNKIEESLGH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D + V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAIDGIQGE------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|398850172|ref|ZP_10606879.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM80]
gi|398986533|ref|ZP_10691599.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM24]
gi|399016842|ref|ZP_10719053.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM16]
gi|108792615|dbj|BAE95780.1| (p)ppGpp synthetase I SpoT/RelA [Pseudomonas sp. MIS38]
gi|398104591|gb|EJL94723.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM16]
gi|398152074|gb|EJM40603.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM24]
gi|398249102|gb|EJN34493.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM80]
Length = 701
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 161/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + ++ + G A L+ V
Sbjct: 46 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALQAQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ + P + ++ K +++ +E L
Sbjct: 163 LEIYAPIANRLGMHAIRIEFEDLGFKAMHPMRSARIYQAVKRARGNRKEIVNKIEESLGH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D + V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAIDGIQGE------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|408356412|ref|YP_006844943.1| GTP pyrophosphokinase [Amphibacillus xylanus NBRC 15112]
gi|407727183|dbj|BAM47181.1| GTP pyrophosphokinase [Amphibacillus xylanus NBRC 15112]
Length = 729
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/335 (32%), Positives = 169/335 (50%), Gaps = 39/335 (11%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA L +DAE I+ G L VVE +++ + + A L+ ++ +
Sbjct: 54 VQVASILAKLGLDAETIAGGFLHDVVEDTDKTLKDIEEAFNEEIAMLVDGVTKL-GKIQY 112
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K Q + + A RK F DIR +++ LA R+ MR L YLP +Q I+ E ++I
Sbjct: 113 KSQ--EAQQAENHRKMFIAMSKDIRVILIKLADRVHNMRTLKYLPPEKQRRIANETLEIF 170
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED++ RYL P Y + ++ + I+ E +++ K
Sbjct: 171 APLAHRLGISAIKWELEDVALRYLNPQQYYRIVNLMKQKREERENYIE---EVMIEVQKQ 227
Query: 293 DATLADLVEDVSVQ----GRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+E V+++ GR K YS +K++ + +E+ D+L +R+I+ +
Sbjct: 228 -------LEQVNIRAEFSGRPKHIYSIYRKMMLQNKQFDEIYDLLAVRIIVNSIKD---- 276
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY II + WK MP R KDYIA PK N Y+SLH V G +E+Q
Sbjct: 277 -------CYAVLGIIHTCWKPMPGRFKDYIAMPKPNLYQSLHTTVI----GPKGAPLEVQ 325
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLT------NPEE 437
IRT+EM +A G A+H YK G + NPEE
Sbjct: 326 IRTKEMHEIAEYGIAAHWAYKEGKSVKPGKGNPEE 360
>gi|40063134|gb|AAR37981.1| GTP pyrophosphokinase [uncultured marine bacterium 561]
Length = 744
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 159/327 (48%), Gaps = 28/327 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L+ L +LA+L++ + + AG L + V +SI ++ R G A LL LR+
Sbjct: 65 LSVGLETVQILAELRLGPDALIAGFLYRSVRQQVISIDTLKHRFGDKVASLLDGVLRMAA 124
Query: 170 NVNLK----LQVLDDETAAAL---RKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQL 222
+L + VL A + R D+R ++ LA R MR L ++Q
Sbjct: 125 VSDLTDLSDVPVLGQSAAPNINIRRMLVAIVDDVRVALIKLAERTVAMRGLKGAEEHRQQ 184
Query: 223 MISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIY 282
I+ EV ++APLAH + +L +ELEDLSFRY +Y + + L I
Sbjct: 185 RIAWEVFNVYAPLAHRLGVGHLKWELEDLSFRYTNKDAYHRIASLLDGRRQDRDSFIARV 244
Query: 283 KEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPS 342
QL Q L T + LA + GR K YS +K+ + G +V+D+ LR+++
Sbjct: 245 NAQLTQTL-TQSELA-----FEITGRAKHIYSIWRKMQRKGIGFSQVHDIRALRILVDDV 298
Query: 343 SNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTR 402
+ ACY T ++ +W+ +P+ DYIA PK NGYRSLH AV + GK
Sbjct: 299 A-----------ACYQTLGVVHGMWRNIPNEFDDYIASPKENGYRSLHTAV-IGPEGK-- 344
Query: 403 PLMEIQIRTEEMDMLAVNGTASHAFYK 429
++E+QIRTEEM A G +H YK
Sbjct: 345 -ILEVQIRTEEMHEEAELGVCAHWRYK 370
>gi|367475461|ref|ZP_09474920.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Bradyrhizobium sp.
ORS 285]
gi|365272177|emb|CCD87388.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Bradyrhizobium sp.
ORS 285]
Length = 768
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 163/329 (49%), Gaps = 25/329 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
T L VA +L DL++D I A LL +E + ++ G L+ ++K
Sbjct: 83 FTHPLEVAAILTDLKLDDATIVAALLHDTIEDTEATRAEIDRFFGPEIGALVEGLTKLKR 142
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+L + + A LRK L D +R L++ LA RL MR L+++P + I+ E
Sbjct: 143 ---LELVSREAKQAENLRKLLLAIADDVRVLLVKLADRLHNMRTLEFVPEASRRRIAEET 199
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+APLA + + ELEDLSFR L P +Y V L + ++ LI + QL +
Sbjct: 200 LDIYAPLAGRMGMQEMREELEDLSFRTLDPQAYSVVMQRLDALADRNRNLIGEIESQLAR 259
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ A V GR K +S K+ + E+++D+ G RVI+
Sbjct: 260 KFRDHGLTA------RVFGRRKRPFSIWTKMERKSIGFEQLSDIFGFRVIMPDLE----- 308
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
+CY I+ + W +P R KDYI+ PK N YRS+H V GK R +E+Q
Sbjct: 309 ------SCYRALGIVHTTWPVVPGRFKDYISTPKQNDYRSIHTT--VIGPGKQR--VELQ 358
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
IRTE+MD +A G A+HAFYK + +P E
Sbjct: 359 IRTEDMDQIAELGIAAHAFYKDDIGSPTE 387
>gi|385676940|ref|ZP_10050868.1| GTP pyrophosphokinase [Amycolatopsis sp. ATCC 39116]
Length = 776
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 167/321 (52%), Gaps = 27/321 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LA+L MD + A LL VE G S++Q+ G A L+ ++
Sbjct: 97 ITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYSVEQLTADFGDKVAQLVDGVTKLD- 155
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
K+++ A +RK + D R L++ LA RL MR + +LP +Q+ + E
Sbjct: 156 ----KVKLGTAAEAETIRKMVIAMARDPRVLVIKLADRLHNMRTMRFLPPEKQVRKAKET 211
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+++ APLAH + + +ELEDL+F L P Y D +R P DIY +++
Sbjct: 212 LEVLAPLAHRLGMATVKWELEDLAFAILQPKKY---DEIVRL-VADRAPSRDIYLRKVID 267
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L L V+GR K YS +K++ GR ++++D++G+R++++
Sbjct: 268 ELT--GALGGSRITAKVEGRPKHYYSIHQKMIVRGRDLDDIHDLVGVRILVEDV------ 319
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY ++ +LW+ MP R KDYIA+P+ Y+SLH V + +GK PL E+Q
Sbjct: 320 -----RDCYAAMGVVHALWQPMPGRFKDYIAQPRFGVYQSLHTTV-IGPDGK--PL-EVQ 370
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM A G A+H YK
Sbjct: 371 IRTYEMHHTAEYGIAAHWRYK 391
>gi|15231772|ref|NP_188021.1| RelA-SpoT like protein RSH2 [Arabidopsis thaliana]
gi|11994378|dbj|BAB02337.1| unnamed protein product [Arabidopsis thaliana]
gi|332641938|gb|AEE75459.1| RelA-SpoT like protein RSH2 [Arabidopsis thaliana]
Length = 709
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/335 (34%), Positives = 169/335 (50%), Gaps = 36/335 (10%)
Query: 106 SRSP-LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLH-- 162
SR P L + A+LLA++ ++ V+ AGLL ++ +S + G G A L+
Sbjct: 229 SRDPYLQHCVETAMLLANIGANSTVVVAGLLHDTIDDSFMSYDYILRNFGAGVADLVEGV 288
Query: 163 ------ESLRVKNNVNLKLQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYL 216
L +NN K D L L D RA+++ LA RL M+ L L
Sbjct: 289 SKLSQLSKLARENNTACKTVEAD-----RLHTMFLAMADARAVLIKLADRLHNMKTLYAL 343
Query: 217 PRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSK 276
+Q + E ++I APLA+ + + +LE+L F++L+P + + T L ++ +
Sbjct: 344 SPVKQQRFAKETLEIFAPLANRLGISTWKVQLENLCFKHLYPNQHNEMSTMLE--DSFDE 401
Query: 277 PLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLR 336
+I E+L Q LK A + V + GR+KS YS K+LK +E++D+ GLR
Sbjct: 402 AMITSAIEKLEQALKK----AGISYHV-LCGRHKSLYSIYSKMLKKKLTVDEIHDIHGLR 456
Query: 337 VIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVS 396
+I+ E CY ++ SLW E+P + KDYI PK NGY+SLH V
Sbjct: 457 LIVD-----------NEGDCYKALGVVHSLWSEVPGKLKDYITHPKFNGYQSLHTV--VM 503
Query: 397 DNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGG 431
DNG T PL E+QIRT+EM + A G A+H YK G
Sbjct: 504 DNG-TVPL-EVQIRTQEMHLQAEFGFAAHWRYKEG 536
>gi|336063522|ref|YP_004558381.1| GTP pyrophosphokinase [Streptococcus pasteurianus ATCC 43144]
gi|334281722|dbj|BAK29295.1| GTP pyrophosphokinase [Streptococcus pasteurianus ATCC 43144]
Length = 739
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/330 (31%), Positives = 170/330 (51%), Gaps = 30/330 (9%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL +D ++ G L VVE V++ + G ++ ++ +
Sbjct: 55 IQVAGILADLHLDVVTVACGFLHDVVEDTEVTLDDIEAEFGKDVRDIVDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E M+I+
Sbjct: 112 EYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELEDLSFRYL + + ++ + L+D ++++ +K
Sbjct: 172 APLAHRLGISRIKWELEDLSFRYLDEIEFYKISHMMKEKRREREALVD----EIVKKIKD 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
L +V GR K YS +K+ + +++ D++ +R I++ S++
Sbjct: 228 YTQEQGLYGEVY--GRPKHIYSIYRKMRDKKKRFDQIYDLIAIRCIMETPSDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQIRT+
Sbjct: 279 ----YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQIRTK 329
Query: 413 EMDMLAVNGTASHAFYKGGLT----NPEEA 438
EM +A G A+H YK G+ N E+A
Sbjct: 330 EMHQVAEYGVAAHWAYKQGIKGKVDNQEQA 359
>gi|77461772|ref|YP_351279.1| (p)ppGpp synthetase SpoT/RelA [Pseudomonas fluorescens Pf0-1]
gi|398976553|ref|ZP_10686459.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM25]
gi|77385775|gb|ABA77288.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pseudomonas fluorescens Pf0-1]
gi|398139389|gb|EJM28390.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas sp. GM25]
Length = 701
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 161/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + ++ + G A L+ V
Sbjct: 46 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALQAQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ + P + ++ K +++ +E L
Sbjct: 163 LEIYAPIANRLGMHAIRIEFEDLGFKAMHPMRSARIYQAVKRARGNRKEIVNKIEESLGH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D + V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAIDGIQGE------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|375105007|ref|ZP_09751268.1| (p)ppGpp synthetase, RelA/SpoT family [Burkholderiales bacterium
JOSHI_001]
gi|374665738|gb|EHR70523.1| (p)ppGpp synthetase, RelA/SpoT family [Burkholderiales bacterium
JOSHI_001]
Length = 761
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 189/366 (51%), Gaps = 30/366 (8%)
Query: 67 AFNELTERMNVLSSSSSRLLFKALKL--SIPMLQSLPLSPDSRSPLTKALSVALLLADLQ 124
+F+ L E+++ L + +L+ +A K S + Q + +T ++VA L+AD +
Sbjct: 35 SFDTLAEKLHYLGKAELKLVREAYKFADSAHLGQ---FRASGQPYITHPIAVAGLVADWR 91
Query: 125 MDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAA 184
+DA+ + A L+ +E GV+ ++ +R G TA L+ ++ L+ ++ A
Sbjct: 92 LDAQAVMAALMHDAMEDCGVTKPELIERFGAPTADLVDGLTKLDK---LQFSTREEGQAE 148
Query: 185 ALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNY 243
+ RK L D+R +++ LA RL MR + + ++ I+ E + I+AP+AH + N
Sbjct: 149 SFRKMLLAMARDVRIILIKLADRLHNMRTMGAMQPNKRGRIARETLDIYAPIAHRLGLNQ 208
Query: 244 LSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDV 303
+ EL++LSF +L P+ + + ++ + ++ + ++ + AD V
Sbjct: 209 IYRELQELSFEHLHPWRHGALTKAVQRARGHRRDIVARVQREV------EKAFADAKMKV 262
Query: 304 SVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREII 363
V GR K+ YS +K+ + +V+D+ G R+I+ + CY + ++
Sbjct: 263 QVGGREKTVYSIYRKMREKHTSFAQVSDIFGFRIIVPALPD-----------CYLSLGVL 311
Query: 364 QSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTA 423
L+K +P R KDYIA PKANGY+SLH + VS G +E Q+RTE M+++A G A
Sbjct: 312 HQLYKPVPGRFKDYIAIPKANGYQSLHTTL-VSPLGTA---VEFQMRTEPMNVVAETGIA 367
Query: 424 SHAFYK 429
+H YK
Sbjct: 368 AHWLYK 373
>gi|402698898|ref|ZP_10846877.1| GTP pyrophosphokinase [Pseudomonas fragi A22]
Length = 750
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 164/336 (48%), Gaps = 29/336 (8%)
Query: 102 LSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLL 161
L + S L +A +LADL++D + + A +L + V G V + V R G A L+
Sbjct: 57 LWAEGMSSFRTGLEIAEILADLKLDQDSLVAAILYRCVREGQVQLPAVSQRFGPVVAKLI 116
Query: 162 HESLRVKNNVNLKLQ-----VLDDETAAA-LRKFCLTYYD-IRALILDLAIRLDMMRHLD 214
LR+ ++ L VL + LRK + D +R ++ LA R +R +
Sbjct: 117 DGVLRMAA-ISASLSPRQSMVLGTQGQVENLRKMLVAMVDDVRVALIKLAERTCAIRAVK 175
Query: 215 YLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETG 274
P ++ ++ EV I+APLAH + ++ +ELEDLSFRYL P Y + T L
Sbjct: 176 NAPDEKRNRVAREVFDIYAPLAHRLGIGHIKWELEDLSFRYLEPEQYKQIATLLHERRLD 235
Query: 275 SKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLG 334
+ I ++ L+T+ + D+S GR K YS +K+ + G ++ DV
Sbjct: 236 RERFIS----DVMNQLRTELVATGVDADIS--GRAKHIYSIWRKMQRKGLAFSQIYDVRA 289
Query: 335 LRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVD 394
+RV++ R CYT I+ +LW+ +P DYIA PK NGYRSLH AV
Sbjct: 290 VRVLVPEM-----------RDCYTALGIVHTLWRHIPKEFDDYIANPKENGYRSLHTAV- 337
Query: 395 VSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKG 430
+ GK ++E+QIRT M A G +H YKG
Sbjct: 338 IGPEGK---VLEVQIRTHAMHEEAELGVCAHWRYKG 370
>gi|306832661|ref|ZP_07465800.1| GTP diphosphokinase [Streptococcus bovis ATCC 700338]
gi|304425269|gb|EFM28396.1| GTP diphosphokinase [Streptococcus bovis ATCC 700338]
Length = 739
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/330 (31%), Positives = 170/330 (51%), Gaps = 30/330 (9%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL +D ++ G L VVE V++ + G ++ ++ +
Sbjct: 55 IQVAGILADLHLDVVTVACGFLHDVVEDTEVTLDDIEAEFGKDVRDIVDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E M+I+
Sbjct: 112 EYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELEDLSFRYL + + ++ + L+D ++++ +K
Sbjct: 172 APLAHRLGISRIKWELEDLSFRYLDEIEFYKISHMMKEKRREREALVD----EIVKKIKD 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
L +V GR K YS +K+ + +++ D++ +R I++ S++
Sbjct: 228 YTQEQGLYGEVY--GRPKHIYSIYRKMRDKKKRFDQIYDLIAIRCIMETPSDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQIRT+
Sbjct: 279 ----YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQIRTK 329
Query: 413 EMDMLAVNGTASHAFYKGGLT----NPEEA 438
EM +A G A+H YK G+ N E+A
Sbjct: 330 EMHQVAEYGVAAHWAYKQGIKGKVDNQEQA 359
>gi|58337233|ref|YP_193818.1| ppGpp synthetase [Lactobacillus acidophilus NCFM]
gi|58254550|gb|AAV42787.1| ppGpp synthetase [Lactobacillus acidophilus NCFM]
Length = 746
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/330 (34%), Positives = 167/330 (50%), Gaps = 37/330 (11%)
Query: 116 VALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRV-KNNVNLK 174
VA LA+L +D + I+AG L VE V+ +++++ G A ++ ++ K N
Sbjct: 57 VAGTLANLGLDPDTIAAGFLHDTVEDTPVTNDELKEKFGEDVAFIVDGVTKLNKYEYNSH 116
Query: 175 LQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHA 233
+ L A RK + D+R +++ LA RL M L +L +Q I+ E M I+A
Sbjct: 117 QEFL----AENHRKMLIAMAKDLRVIMVKLADRLHNMHTLQHLRPDKQRRIASETMDIYA 172
Query: 234 PLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQ----LLQC 289
PLA + + +ELED+SF YL P +Y + L+D+ + Q +
Sbjct: 173 PLADRLGIGTIKWELEDMSFHYLNPEAYYRIVN-----------LMDVKRSQREKYISDT 221
Query: 290 LKT-DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+KT TL +L + GR K YS KK++ + +E+ D+L +RVI+K
Sbjct: 222 IKTLKKTLDELGIKYDIYGRPKHIYSIYKKMVNKHKDFDEIYDLLAVRVIVKNV------ 275
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY + + WK MP R KDYIA PK NGY+SLH + + G RPL EIQ
Sbjct: 276 -----RDCYAVLGAVHTEWKPMPGRFKDYIAMPKVNGYQSLHTTI-IGPGG--RPL-EIQ 326
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEA 438
IRTE+M +A G A+H YK G N EA
Sbjct: 327 IRTEQMHEVAEYGVAAHWAYKRGNFNGVEA 356
>gi|403070228|ref|ZP_10911560.1| GTP pyrophosphokinase [Oceanobacillus sp. Ndiop]
Length = 733
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 165/319 (51%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MDAE I+ G L VVE V+++++ A L+ ++ +
Sbjct: 55 VQVAGILANLEMDAETIAGGFLHDVVEDTDVTLEKMEQEFNHEIAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + + + A RK F DIR +++ LA RL MR L +L +Q IS E ++I
Sbjct: 112 RYETKEAQQAENHRKMFVAMAKDIRVILIKLADRLHNMRTLKHLSSEKQRRISNETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ + Y ++++ L
Sbjct: 172 APLAHRLGISTIKWELEDTALRYLNPQQYYRIVQLMKQKREERES----YIKEVIDELSV 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
D L ++ + + GR K YS +K++ + E+ D+L +R+I+ +
Sbjct: 228 D--LHEVNIEAEMSGRPKHLYSIYQKMVLQNKQFNEIYDLLAVRIIVDSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PK N Y+SLH V + G PL E+QIRT+
Sbjct: 278 ---CYAVLGIIHTNWKPMPGRFKDYIAMPKQNLYQSLHTTV-IGPKGD--PL-EVQIRTK 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 331 EMHEIAEYGIAAHWAYKEG 349
>gi|70731792|ref|YP_261534.1| GTP diphosphokinase [Pseudomonas protegens Pf-5]
gi|68346091|gb|AAY93697.1| GTP diphosphokinase [Pseudomonas protegens Pf-5]
Length = 747
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/339 (31%), Positives = 160/339 (47%), Gaps = 35/339 (10%)
Query: 102 LSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLL 161
LSP+ S + L +A +LADL++D + + A +L + V G + + V R G L+
Sbjct: 57 LSPEDVSSFSTGLEIAEILADLKLDQDSLVAAVLYRGVREGQIQLPAVSQRFGPVVTKLI 116
Query: 162 HESLRV---------KNNVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMR 211
LR+ + ++ L Q LRK + D +R ++ LA R +R
Sbjct: 117 DGVLRMAAITASLSPRQSLVLGTQA----QVENLRKMLVAMVDDVRVALIKLAERTCAIR 172
Query: 212 HLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSH 271
+ ++ ++ EV I+APLAH + ++ +ELEDLSFRYL P Y + L
Sbjct: 173 AVKSADEEKRNRVAREVFDIYAPLAHRLGIGHIKWELEDLSFRYLEPEQYKQIAKLLHER 232
Query: 272 ETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVND 331
+ I QL LK AD + GR K YS +K+ + G ++ D
Sbjct: 233 RLDRERFISDVMNQLQNELKATGVNAD------ISGRAKHIYSIWRKMQRKGLEFSQIYD 286
Query: 332 VLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHM 391
V +RV++ R CYT I+ +LW+ +P DYIA PK NGYRSLH
Sbjct: 287 VRAVRVLVPEM-----------RDCYTALGIVHTLWRHIPKEFDDYIANPKENGYRSLHT 335
Query: 392 AVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKG 430
AV + GK ++E+QIRT M A G +H YKG
Sbjct: 336 AV-IGPEGK---VLEVQIRTHAMHEEAELGVCAHWKYKG 370
>gi|388543942|ref|ZP_10147231.1| (p)ppGpp synthetase SpoT/RelA [Pseudomonas sp. M47T1]
gi|388277770|gb|EIK97343.1| (p)ppGpp synthetase SpoT/RelA [Pseudomonas sp. M47T1]
Length = 702
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 161/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + + + G A L+ V
Sbjct: 46 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALSAQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ ++P + ++ K +++ ++ L
Sbjct: 163 LEIYAPIANRLGMHNVRVEFEDLGFKAMYPMRSARIYQAVKRARGNRKEIVNKIEQSLGH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D D V GR K Y KK+ R E+ DV R+++ + V+T
Sbjct: 223 CLAVDGIEGD------VSGRQKHIYGIYKKMRGKRRAFNEIMDVYAFRIVV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|260891210|ref|ZP_05902473.1| GTP diphosphokinase [Leptotrichia hofstadii F0254]
gi|260859237|gb|EEX73737.1| GTP diphosphokinase [Leptotrichia hofstadii F0254]
Length = 389
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 164/321 (51%), Gaps = 35/321 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LAD++MD + I AGLL VVE + ++ + D G L+ +++N
Sbjct: 85 VEVAEILADMKMDTDTIVAGLLHDVVEDTLIVLEDIEDNFGKDVKKLVDGVTKLRN---- 140
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
L D + RK + DIR +I+ LA RL MR L Y+ +Q S E ++I+
Sbjct: 141 -LPRTDSKKLENKRKMVIAMSEDIRVVIIKLADRLHNMRTLKYMKPEKQQEKSKETIEIY 199
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYL----FVDTWLRSHETGSKPLIDIYKEQLLQ 288
AP+AH + + +ELED+SFR+L+P Y V+T R E Y + ++
Sbjct: 200 APIAHRIGMARIKWELEDISFRFLYPNDYYEIKELVNTKRREREE--------YTAKFIE 251
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+K + ++ +V+ GR K YS +K+ + + ++ D++ +R+I++ +
Sbjct: 252 KIKIELKKNNIKGEVT--GRPKHLYSIYRKMNEKQKRFMDLYDLIAIRIIVEKKN----- 304
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY II L+ + R KDY+A+PK NGY+S+H V G +EIQ
Sbjct: 305 ------ECYNVLGIIHDLFIPVFDRFKDYVAQPKPNGYQSIHTTV----KGPNNQNVEIQ 354
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT+EM +A G A+H YK
Sbjct: 355 IRTQEMHEIAEEGVAAHWKYK 375
>gi|111115020|ref|YP_709638.1| guanosine-3,5-bis(diphosphate) 3- pyrophosphohydrolase [Borrelia
afzelii PKo]
gi|216263902|ref|ZP_03435896.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
((ppGpp)ase) [Borrelia afzelii ACA-1]
gi|384206696|ref|YP_005592417.1| relA/SpoT family protein [Borrelia afzelii PKo]
gi|110890294|gb|ABH01462.1| guanosine-3,5-bis(diphosphate) 3- pyrophosphohydrolase [Borrelia
afzelii PKo]
gi|215979946|gb|EEC20768.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
((ppGpp)ase) [Borrelia afzelii ACA-1]
gi|342856579|gb|AEL69427.1| relA/SpoT family protein [Borrelia afzelii PKo]
Length = 667
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 173/353 (49%), Gaps = 41/353 (11%)
Query: 86 LFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVS 145
+FKAL+++ L + + V+L LA Q+D + AGLL V+E +
Sbjct: 40 IFKALEIA-EQLHYGQYRESGEPYIIHPIMVSLFLAKFQLDFKATIAGLLHDVLEDTNIE 98
Query: 146 IQQVRDRI---------GIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRKFCLTYYDI 196
+++ G+ H LH R N ++ F +T+ DI
Sbjct: 99 KEEIVKEFDEEILSLIDGVTKIHDLHNKTRSIKEANTISKMF----------FAMTH-DI 147
Query: 197 RALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYL 256
R +I+ LA +L M L YLP+ +Q I+ + + + P+A + + L LEDLSF++L
Sbjct: 148 RIIIIKLADKLHNMTTLSYLPKNRQDRIAKDCLSTYVPIAERLGISSLKTYLEDLSFKHL 207
Query: 257 FPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTM 316
+P Y + +L ET + +YK +L ++ + + + +++V R K YS
Sbjct: 208 YPKDYKEIKNFLS--ETKIEREKKLYKGKL--SIEKELQKSGIEAEITV--RSKHFYSIF 261
Query: 317 KKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKD 376
+K+ ++ D LG+R+I K ++ CY EI+ +WK +P R KD
Sbjct: 262 RKMQTRTNKLTQIFDTLGIRIICKK-----------QKECYEILEIVHRVWKPIPGRLKD 310
Query: 377 YIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYK 429
YIA PK N Y+SLH V + ++ + L+EIQIRTEEMD +A G A+H YK
Sbjct: 311 YIASPKENKYQSLHTTVRIPEDNQ---LIEIQIRTEEMDRIANYGVAAHWIYK 360
>gi|194289079|ref|YP_002004986.1| bifunctional: (p)ppgpp synthetase ii; guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase; precursor
[Cupriavidus taiwanensis LMG 19424]
gi|193222914|emb|CAQ68919.1| bifunctional: (p)ppGpp synthetase II; guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase; putative
precursor [Cupriavidus taiwanensis LMG 19424]
Length = 845
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 169/321 (52%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++VA L AD ++D + I A LL V+E G++ ++ ++ G A L+ ++
Sbjct: 169 ITHPVAVAELCADWKLDVQSIMAALLHDVMEDQGITKSELAEKFGPKVAELVDGLTKLDK 228
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+ Q + A + RK L D+R +++ LA R MR LD++P ++ I+LE
Sbjct: 229 ---LEFQSREQAQAESFRKMLLAMARDVRVILVKLADRTHNMRTLDFVPPEKRRRIALET 285
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+AP+AH + N + EL++LSF+ PF Y ++ +++ + ++ +++L+
Sbjct: 286 MEIYAPIAHRLGLNTIYRELQELSFKVGSPFRYATLEKAVKAARGNRREVV----KRILE 341
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ A +V ++S GR K+ YS +K+ +V DV G RV+++ +
Sbjct: 342 AAQKALADAGIVAELS--GREKTLYSIYRKMHDKQLSFSQVLDVYGFRVVVETQMH---- 395
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + L+K MP + KDYIA PK NGY+SLH + V G +E Q
Sbjct: 396 -------CYMAMGALHGLYKPMPGKFKDYIAIPKINGYQSLHTTL-VGPFGTP---VEFQ 444
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT +M +A G A+H YK
Sbjct: 445 IRTRDMHQIAEAGVAAHWMYK 465
>gi|152998381|ref|YP_001343216.1| (p)ppGpp synthetase I SpoT/RelA [Marinomonas sp. MWYL1]
gi|150839305|gb|ABR73281.1| (p)ppGpp synthetase I, SpoT/RelA [Marinomonas sp. MWYL1]
Length = 705
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 176/321 (54%), Gaps = 24/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +L++L+MD + ++A LL V+E G+S + + ++ G G A L+ V
Sbjct: 46 VTHPLAVAEILSELRMDCDGLTAALLHDVIEDTGISREALTEQFGEGVAGLVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+L+ ++ A +K + D IR +++ LA RL MR LD +P +++ I+ E
Sbjct: 103 LTHLEFNSQIEKQAHNFQKMAMAMADDIRVILVKLADRLHNMRTLDAMPAHKKRRIARET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+AP+A+ + + +LE L+F+ +P + + + G + + D K L
Sbjct: 163 LDIYAPIANRLGMYNVRVDLESLAFQAYYPMRARMLQKAIHK-KYGQQRIKDTQK--LED 219
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
++++ AD +E ++ R K YS +K+ K R +E+ DV+G+R++
Sbjct: 220 TIRSELA-ADYIE-ATISVREKHIYSIYQKMDKKRRSLDEIMDVMGVRIVTDRHD----- 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
+CY +I +L+K + R KDYIA PK+NGY+SLH V + NG ME+Q
Sbjct: 273 ------SCYRILGVIHALFKPIEGRFKDYIAVPKSNGYQSLHTTV-LGTNGIP---MEVQ 322
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRTEEMD++A NG A+H YK
Sbjct: 323 IRTEEMDLVANNGIAAHWAYK 343
>gi|51598458|ref|YP_072646.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Borrelia
garinii PBi]
gi|51573029|gb|AAU07054.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Borrelia
garinii PBi]
Length = 667
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 173/353 (49%), Gaps = 41/353 (11%)
Query: 86 LFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVS 145
+FKAL+++ L + + V+L LA Q+D + AGLL V+E +
Sbjct: 40 IFKALEIA-EQLHYGQYRESGEPYIIHPIMVSLFLAKFQLDFKATIAGLLHDVLEDTNIE 98
Query: 146 IQQVRDRI---------GIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRKFCLTYYDI 196
+++ G+ H LH R N ++ F +T+ DI
Sbjct: 99 KEEIVKEFDEEILSLIDGVTKIHDLHNKTRSIKEANTISKMF----------FAMTH-DI 147
Query: 197 RALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYL 256
R +I+ LA +L M L YLP+ +Q I+ + + + P+A + + L LEDLSF++L
Sbjct: 148 RIIIIKLADKLHNMTTLSYLPKNRQDRIAKDCLSTYVPIAERLGISSLKTYLEDLSFKHL 207
Query: 257 FPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTM 316
+P Y + +L ET + +YK +L ++ + + + +++V R K YS
Sbjct: 208 YPKDYKEIKNFLS--ETKIEREKKLYKGKL--SIEKELQKSGIEAEITV--RSKHFYSIF 261
Query: 317 KKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKD 376
+K+ ++ D LG+R+I K ++ CY EI+ +WK +P R KD
Sbjct: 262 RKMQTRTNKLTQIFDTLGIRIICKK-----------QKECYEILEIVHRVWKPIPGRLKD 310
Query: 377 YIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYK 429
YIA PK N Y+SLH V + ++ + L+EIQIRTEEMD +A G A+H YK
Sbjct: 311 YIASPKENKYQSLHTTVRIPEDNQ---LIEIQIRTEEMDRIANYGVAAHWIYK 360
>gi|388569523|ref|ZP_10155915.1| GTP pyrophosphokinase [Hydrogenophaga sp. PBC]
gi|388263272|gb|EIK88870.1| GTP pyrophosphokinase [Hydrogenophaga sp. PBC]
Length = 753
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 178/363 (49%), Gaps = 33/363 (9%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++VA A+ ++DA+ + A L+ +E GV+ Q++ +R G A L+ +++
Sbjct: 69 ITHPIAVAAQCAEWKLDAQALMAALMHDAIEDCGVTKQELVERFGAPVAELVDGLTKLER 128
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+ + A + RK L D+R +++ LA R MR + +PR + IS E
Sbjct: 129 ---LEFTSREQNQAESFRKMLLAMAKDVRVILIKLADRTHNMRTMADMPRNKWQRISSET 185
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+AH + N+ EL+DL+FR+L P+ Y + L + LI ++++
Sbjct: 186 LEIYAPIAHRLGLNFTYRELQDLAFRFLHPWRYEVLSKALNKARNRRRDLIARVQQEV-- 243
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+A V + GR K+ Y +K+ +V D+ G R+++ ++
Sbjct: 244 ----EAAFGRHKLGVRMMGREKTLYFIYRKMDSKHLSFAQVTDIYGFRLVVPDLTD---- 295
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CYT ++ L+K +P + +DY+A PK NGY+SLH + V G +E Q
Sbjct: 296 -------CYTALGVLHQLYKPLPGKFRDYVAIPKVNGYQSLHTTL-VGPFGTN---IEFQ 344
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFE 468
+RT MD++A +G A+H YK + ++RL L + L DI H E
Sbjct: 345 VRTHAMDVVAESGVAAHWLYKANEPGSDMSQRLGTQWLQS-------LLDIQQETHDASE 397
Query: 469 FDW 471
F W
Sbjct: 398 F-W 399
>gi|365889055|ref|ZP_09427776.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Bradyrhizobium sp.
STM 3809]
gi|365335232|emb|CCE00307.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Bradyrhizobium sp.
STM 3809]
Length = 765
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 163/329 (49%), Gaps = 25/329 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
T L VA +L DL++D I A LL +E + ++ G L+ ++K
Sbjct: 81 FTHPLEVAAILTDLKLDDATIVAALLHDTIEDTEATRAEIDRFFGPEIGALVEGLTKLKR 140
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+L + + A LRK L D +R L++ LA RL MR L+++P + I+ E
Sbjct: 141 ---LELVSREAKQAENLRKLLLAIADDVRVLLVKLADRLHNMRTLEFVPEASRRRIAEET 197
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+APLA + + ELEDLSFR L P +Y V L + ++ LI + QL +
Sbjct: 198 LDIYAPLAGRMGMQEMREELEDLSFRTLDPQAYGVVMQRLDALADRNRNLIGEIESQLAR 257
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ A V GR K +S K+ + E+++D+ G RVI+
Sbjct: 258 KFRDHGLTA------RVFGRRKRPFSIWTKMERKSIGFEQLSDIFGFRVIMPDLE----- 306
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
+CY I+ + W +P R KDYI+ PK N YRS+H V GK R +E+Q
Sbjct: 307 ------SCYRALGIVHTTWPVVPGRFKDYISTPKQNDYRSIHTT--VIGPGKQR--VELQ 356
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
IRTE+MD +A G A+HAFYK + +P E
Sbjct: 357 IRTEDMDQIAELGIAAHAFYKDDIGSPTE 385
>gi|408670825|ref|YP_006870896.1| guanosine-3,5-bis(diphosphate) [Borrelia garinii NMJW1]
gi|407240647|gb|AFT83530.1| guanosine-3,5-bis(diphosphate) [Borrelia garinii NMJW1]
Length = 667
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 173/353 (49%), Gaps = 41/353 (11%)
Query: 86 LFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVS 145
+FKAL+++ L + + V+L LA Q+D + AGLL V+E +
Sbjct: 40 IFKALEIA-EQLHYGQYRESGEPYIIHPIMVSLFLAKFQLDFKATIAGLLHDVLEDTNIQ 98
Query: 146 IQQVRDRI---------GIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRKFCLTYYDI 196
+++ G+ H LH R N ++ F +T+ DI
Sbjct: 99 KEEIVKEFDEEILSLIDGVTKIHDLHNKTRSIKEANTISKMF----------FAMTH-DI 147
Query: 197 RALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYL 256
R +I+ LA +L M L YLP+ +Q I+ + + + P+A + + L LEDLSF++L
Sbjct: 148 RIIIIKLADKLHNMTTLSYLPKNRQDRIAKDCLSTYVPIAERLGISSLKTYLEDLSFKHL 207
Query: 257 FPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTM 316
+P Y + +L ET + +YK +L ++ + + + +++V R K YS
Sbjct: 208 YPKDYKEIKNFLS--ETKIEREKKLYKGKL--SIEKELQKSGIEAEITV--RSKHFYSIF 261
Query: 317 KKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKD 376
+K+ ++ D LG+R+I K ++ CY EI+ +WK +P R KD
Sbjct: 262 RKMQTRTNKLTQIFDTLGIRIICKK-----------QKECYEILEIVHRVWKPIPGRLKD 310
Query: 377 YIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYK 429
YIA PK N Y+SLH V + ++ + L+EIQIRTEEMD +A G A+H YK
Sbjct: 311 YIASPKENKYQSLHTTVRIPEDNQ---LIEIQIRTEEMDRIANYGVAAHWIYK 360
>gi|222152432|ref|YP_002561607.1| GTP pyrophosphokinase [Streptococcus uberis 0140J]
gi|222113243|emb|CAR40752.1| GTP pyrophosphokinase [Streptococcus uberis 0140J]
Length = 739
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/320 (31%), Positives = 162/320 (50%), Gaps = 26/320 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL +DA ++ G L VVE +S+ + ++ ++ +
Sbjct: 55 IQVAGILADLHLDATTVACGFLHDVVEDTEISLDDIEAEFDKDVRDIVDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E M+I+
Sbjct: 112 EYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELEDL+FRYL + + +R + L+D +++
Sbjct: 172 APLAHRLGISRIKWELEDLAFRYLNESEFYKISHMMREKRREREALVDEIVAKIVTYTNE 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 232 QGLYGD------VYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCVMETQSDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQIRT+
Sbjct: 279 ----YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQIRTK 329
Query: 413 EMDMLAVNGTASHAFYKGGL 432
EM +A G A+H YK G+
Sbjct: 330 EMHQVAEYGVAAHWAYKKGV 349
>gi|365883079|ref|ZP_09422259.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Bradyrhizobium sp.
ORS 375]
gi|365288511|emb|CCD94790.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Bradyrhizobium sp.
ORS 375]
Length = 765
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 163/329 (49%), Gaps = 25/329 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
T L VA +L DL++D I A LL +E + ++ G L+ ++K
Sbjct: 83 FTHPLEVAAILTDLKLDDATIVAALLHDTIEDTEATRAEIDRFFGPEIGALVEGLTKLKR 142
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+L + + A LRK L D +R L++ LA RL MR L+++P + I+ E
Sbjct: 143 ---LELVSREAKQAENLRKLLLAIADDVRVLLVKLADRLHNMRTLEFVPEASRRRIAEET 199
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+APLA + + ELEDLSFR L P +Y V L + ++ LI + QL +
Sbjct: 200 LDIYAPLAGRMGMQEMREELEDLSFRTLDPQAYGVVMQRLDALADRNRNLIGEIESQLAR 259
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ A V GR K +S K+ + E+++D+ G RVI+
Sbjct: 260 KFRDHGLTA------RVFGRRKRPFSIWTKMERKSIGFEQLSDIFGFRVIMPDLE----- 308
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
+CY I+ + W +P R KDYI+ PK N YRS+H V GK R +E+Q
Sbjct: 309 ------SCYRALGIVHTTWPVVPGRFKDYISTPKQNDYRSIHTT--VIGPGKQR--VELQ 358
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
IRTE+MD +A G A+HAFYK + +P E
Sbjct: 359 IRTEDMDQIAELGIAAHAFYKDDIGSPTE 387
>gi|219684658|ref|ZP_03539601.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
((ppGpp)ase) [Borrelia garinii PBr]
gi|219685805|ref|ZP_03540614.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
((ppGpp)ase) [Borrelia garinii Far04]
gi|219672020|gb|EED29074.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
((ppGpp)ase) [Borrelia garinii PBr]
gi|219672638|gb|EED29668.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
((ppGpp)ase) [Borrelia garinii Far04]
Length = 667
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 173/353 (49%), Gaps = 41/353 (11%)
Query: 86 LFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVS 145
+FKAL+++ L + + V+L LA Q+D + AGLL V+E +
Sbjct: 40 IFKALEIA-EQLHYGQYRESGEPYIIHPIMVSLFLAKFQLDFKATIAGLLHDVLEDTNIE 98
Query: 146 IQQVRDRI---------GIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRKFCLTYYDI 196
+++ G+ H LH R N ++ F +T+ DI
Sbjct: 99 KEEIVKEFDEEILSLIDGVTKIHDLHNKTRSIKEANTISKMF----------FAMTH-DI 147
Query: 197 RALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYL 256
R +I+ LA +L M L YLP+ +Q I+ + + + P+A + + L LEDLSF++L
Sbjct: 148 RIIIIKLADKLHNMTTLSYLPKNRQDRIAKDCLSTYVPIAERLGISSLKTYLEDLSFKHL 207
Query: 257 FPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTM 316
+P Y + +L ET + +YK +L ++ + + + +++V R K YS
Sbjct: 208 YPKDYKEIKNFLS--ETKIEREKKLYKGKL--SIEKELQKSGIEAEITV--RSKHFYSIF 261
Query: 317 KKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKD 376
+K+ ++ D LG+R+I K ++ CY EI+ +WK +P R KD
Sbjct: 262 RKMQTRTNKLTQIFDTLGIRIICKK-----------QKECYEILEIVHRVWKPIPGRLKD 310
Query: 377 YIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYK 429
YIA PK N Y+SLH V + ++ + L+EIQIRTEEMD +A G A+H YK
Sbjct: 311 YIASPKENKYQSLHTTVRIPEDNQ---LIEIQIRTEEMDRIANYGVAAHWIYK 360
>gi|87118649|ref|ZP_01074548.1| RelA/SpoT protein [Marinomonas sp. MED121]
gi|86166283|gb|EAQ67549.1| RelA/SpoT protein [Marinomonas sp. MED121]
Length = 747
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 168/331 (50%), Gaps = 29/331 (8%)
Query: 108 SPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRV 167
S L + +L+ + D + + A L +VV ++I++V D G A ++ +R+
Sbjct: 62 STFKAGLEMVEILSGFRADQDSLLAAALYRVVREDQLAIEKVADMFGRKVASIIEGVIRM 121
Query: 168 ----KN-NVNLKLQVL--DDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRY 219
KN + + K +VL + +LRK ++ D +R +++ LA R ++ +
Sbjct: 122 GEVSKNLSADTKAEVLGNSENQLESLRKMLVSIIDDVRVVLVKLAERACAIKEAKHQDGA 181
Query: 220 QQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLI 279
++ ++LEV ++APLAH + Y+ +ELEDLSFRYL+P Y V WL + I
Sbjct: 182 RREAVALEVQSVYAPLAHRLGIGYIKWELEDLSFRYLYPVEYKRVAKWLDEKRIARQEYI 241
Query: 280 DIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVII 339
D +++ L D L + + GR K YS +K+ + +EV DV +R+++
Sbjct: 242 D----EVISTL--DIELQKINIHADLMGRAKHIYSIWRKMKRKNIGFDEVYDVRAVRILV 295
Query: 340 KPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNG 399
+ + CY + +LWK +PH DYI+ PK+NGY+SLH AV V NG
Sbjct: 296 DKTMD-----------CYGVLGTVHTLWKPIPHEFDDYISNPKSNGYQSLHTAV-VGPNG 343
Query: 400 KTRPLMEIQIRTEEMDMLAVNGTASHAFYKG 430
+ +EIQIRT +M A G +H YKG
Sbjct: 344 RA---VEIQIRTHKMHEDAELGVCAHWKYKG 371
>gi|90424134|ref|YP_532504.1| (p)ppGpp synthetase I SpoT/RelA [Rhodopseudomonas palustris BisB18]
gi|90106148|gb|ABD88185.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Rhodopseudomonas palustris BisB18]
Length = 761
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 165/329 (50%), Gaps = 25/329 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ L VA +L L++D I A LL +E + ++ + G L+ ++K
Sbjct: 80 FSHPLEVAAILTHLKLDDATIVAALLHDTIEDTEATRTEIDNIFGHEIGALVEGLTKLKR 139
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+L + + A LRK L D+R L++ LA RL MR L+++P + I+ E
Sbjct: 140 ---LELVSREAKQAENLRKLLLAVSNDVRVLLIKLADRLHNMRTLEFVPPASRQRIAEET 196
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+APLA + + ELEDLSF+ L P ++ V L S ++ LI + QL
Sbjct: 197 LDIYAPLAGRMGMQEMREELEDLSFQSLDPDAFAVVMQRLDSLAERNRNLIGEIETQLSA 256
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L + A+ V GR K +S K+ + E+++D+ G RV++K
Sbjct: 257 NLAKNGLSAE------VTGRRKRPFSIWTKMERKSVGFEQLSDIYGFRVVLKDVE----- 305
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
ACY ++ + W +P R KDYI+ PK N Y+S+H V G + +E+Q
Sbjct: 306 ------ACYRALGVVHTTWPVVPGRFKDYISTPKQNDYKSIHTTV----IGPGQQRVELQ 355
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
IRTEEMD +A G A+H+FYK G+ +P E
Sbjct: 356 IRTEEMDQIAEIGIAAHSFYKDGVGSPTE 384
>gi|376261555|ref|YP_005148275.1| RelA/SpoT family (p)ppGpp synthetase [Clostridium sp. BNL1100]
gi|373945549|gb|AEY66470.1| (p)ppGpp synthetase, RelA/SpoT family [Clostridium sp. BNL1100]
Length = 726
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 167/330 (50%), Gaps = 32/330 (9%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA++LA++++D + A LL +E + Q++ + G A L+ ++ +
Sbjct: 51 VEVAIILAEMELDCTALVAALLHDTIEDTTCTYDQLKAQFGQEVAELVDGVTKLGK---I 107
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+++ LRK F DIR +++ LA RL MR L Y+ + +QL + E ++I+
Sbjct: 108 PFTTKEEQQVENLRKMFLAMAKDIRVIMIKLADRLHNMRTLKYMTQDKQLEKARETLEIY 167
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYL----FVDTWLRSHETGSKPLIDIYKEQLLQ 288
APLAH + + + +ELED+ RYL P Y ++T + E +ID +E+
Sbjct: 168 APLAHRLGISKIKWELEDICLRYLDPKGYYDLVEKINTKRKQREAYITIIIDTLREK--- 224
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
T +E+ + GR K YS +K++K + E++ D+ R+I+ +
Sbjct: 225 ------TNELGIENAQIDGRPKHFYSIYRKMVKQNKTLEQIYDLFAFRIIVNSVKD---- 274
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY ++ L+K MP R KDYIA PK N Y+SLH + + G+ E+Q
Sbjct: 275 -------CYAVLGLVHELYKPMPGRFKDYIAMPKPNMYQSLHTTL-IGPEGQP---FEVQ 323
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEA 438
IRT +M +A G A+H YK G+ N +++
Sbjct: 324 IRTWDMHRVAEVGIAAHWKYKEGINNAKDS 353
>gi|385840421|ref|YP_005863745.1| GTP pyrophosphokinase [Lactobacillus salivarius CECT 5713]
gi|300214542|gb|ADJ78958.1| GTP pyrophosphokinase [Lactobacillus salivarius CECT 5713]
Length = 739
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 165/319 (51%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD E +SAG L VVE V++ + + G ++ ++ +
Sbjct: 55 IQVAGILANLKMDPETVSAGFLHDVVEDTKVTLGDIGELFGKDVEVIVDGVTKLSK---I 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + ++ A RK L D+R +I+ LA RL MR L +L +Q I+ E ++I+
Sbjct: 112 RYKSHQEQLAENHRKLLLAMSKDLRVIIVKLADRLHNMRTLSHLRPDKQRRIANETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + + +EL+D+S RYL P Y + + S ID E +++ K
Sbjct: 172 APLADRLGISTIKWELQDMSLRYLNPQQYYRIVHLMNSKREERVHYID---EVIVEIKK- 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+A+L + + GR K YS +K+ + ++ D+ +RVI+K +
Sbjct: 228 --AIAELNIEYDIYGRPKHIYSIYRKMRDQHKQFSQIYDLSAVRVIVKSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKAN Y+SLH V + NG RP E+QIRTE
Sbjct: 278 ---CYAVLGAIHTRWKPMPGRFKDYIAMPKANMYQSLHTTV-IGPNG--RPF-EVQIRTE 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 331 EMHRVAEYGIAAHWAYKEG 349
>gi|386853604|ref|YP_006202889.1| Guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Borrelia
garinii BgVir]
gi|365193638|gb|AEW68536.1| SpoT [Borrelia garinii BgVir]
Length = 667
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 173/353 (49%), Gaps = 41/353 (11%)
Query: 86 LFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVS 145
+FKAL+++ L + + V+L LA Q+D + AGLL V+E +
Sbjct: 40 IFKALEIA-EQLHYGQYRESGEPYIIHPIMVSLFLAKFQLDFKATIAGLLHDVLEDTNIE 98
Query: 146 IQQVRDRI---------GIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRKFCLTYYDI 196
+++ G+ H LH R N ++ F +T+ DI
Sbjct: 99 KEEIVKEFDEEILSLIDGVTKIHDLHNKTRSIKEANTISKMF----------FAMTH-DI 147
Query: 197 RALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYL 256
R +I+ LA +L M L YLP+ +Q I+ + + + P+A + + L LEDLSF++L
Sbjct: 148 RIIIIKLADKLHNMTTLSYLPKNRQDRIAKDCLSTYVPIAERLGISSLKTYLEDLSFKHL 207
Query: 257 FPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTM 316
+P Y + +L ET + +YK +L ++ + + + +++V R K YS
Sbjct: 208 YPKDYKEIKNFLS--ETKIEREKKLYKGKL--SIEKELQKSGIEAEITV--RSKHFYSIF 261
Query: 317 KKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKD 376
+K+ ++ D LG+R+I K ++ CY EI+ +WK +P R KD
Sbjct: 262 RKMQTRTNKLTQIFDTLGIRIICKK-----------QKECYEILEIVHRVWKPIPGRLKD 310
Query: 377 YIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYK 429
YIA PK N Y+SLH V + ++ + L+EIQIRTEEMD +A G A+H YK
Sbjct: 311 YIASPKENKYQSLHTTVRIPEDNQ---LIEIQIRTEEMDRIANYGVAAHWIYK 360
>gi|352518328|ref|YP_004887645.1| GTP pyrophosphokinase [Tetragenococcus halophilus NBRC 12172]
gi|348602435|dbj|BAK95481.1| GTP pyrophosphokinase [Tetragenococcus halophilus NBRC 12172]
Length = 737
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 165/321 (51%), Gaps = 25/321 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L MD I+ G L VVE V++ +++ G A ++ ++ +
Sbjct: 55 IQVAGILAELHMDPHTIAVGFLHDVVEDTDVTLDDLKNEFGHDVAMIVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK L D+R +++ LA RL MR L +L +Q I+ E ++I+
Sbjct: 112 KYKSHEEQLAENYRKMLLAMAQDLRVIMVKLADRLHNMRTLKHLRDDKQRRIARETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + + +ELEDLS RYL P Y + ++S + Y +Q ++ ++
Sbjct: 172 APLADRLGISRIKWELEDLSLRYLNPKQYYRIVHLMQSKRDEREK----YVKQAVEEIRI 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
D+ + GR K YS +K++ + +E+ D+L +RVI+ +
Sbjct: 228 ATEDLDIY--AEIYGRPKHIYSVYRKMVDKKKQFDEIYDLLAIRVIVDSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKAN Y+S+H V + NG +EIQIRT
Sbjct: 278 ---CYAVLGAIHTKWKPMPGRFKDYIAMPKANMYQSIHTTV-IGPNGNP---VEIQIRTH 330
Query: 413 EMDMLAVNGTASHAFYKGGLT 433
+M +A G A+H YK G T
Sbjct: 331 QMHEIAEFGVAAHWAYKEGHT 351
>gi|333899695|ref|YP_004473568.1| (p)ppGpp synthetase I SpoT/RelA [Pseudomonas fulva 12-X]
gi|333114960|gb|AEF21474.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudomonas fulva 12-X]
Length = 748
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/336 (32%), Positives = 164/336 (48%), Gaps = 28/336 (8%)
Query: 102 LSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLL 161
L + S L +A +LADL++D + + A ++ + V G + + +VR R G A L+
Sbjct: 57 LWTEGYSSFGAGLEIAEILADLKLDQDSLVAAVIYRGVREGKIPLAEVRQRFGPVVAKLI 116
Query: 162 HESLRVKN-----NVNLKLQVLDDETAA-ALRKFCLTYYD-IRALILDLAIRLDMMRHLD 214
LR+ N + VL + LRK + D +R ++ LA R +R +
Sbjct: 117 EGVLRMAAISASLNPRGESTVLGSQAQVDNLRKMLVAMVDDVRVALIKLAERTCAIRAVK 176
Query: 215 YLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETG 274
++ ++ EV I+APLAH + ++ +ELEDLSFRYL P Y + L
Sbjct: 177 DTDEERRQRVAREVFDIYAPLAHRLGIGHIKWELEDLSFRYLEPEQYKQIANLLHERRLD 236
Query: 275 SKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLG 334
+ I+ +QL L+ AD + GR K YS +K+ + G ++ DV
Sbjct: 237 REHYINEVMDQLRDELEATGIKAD------ISGRAKHIYSIWRKMQRKGLQFSQIYDVRA 290
Query: 335 LRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVD 394
+RV++ P+ R CYT I+ +LW+ +P DYIA PK NGYRSLH AV
Sbjct: 291 VRVLV-PAV----------RDCYTALGIVHTLWRHIPKEFDDYIANPKENGYRSLHTAV- 338
Query: 395 VSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKG 430
+ GK ++E+QIRT M A G +H YKG
Sbjct: 339 LGPEGK---VLEVQIRTSNMHEEAELGVCAHWRYKG 371
>gi|242280235|ref|YP_002992364.1| (p)ppGpp synthetase I SpoT/RelA [Desulfovibrio salexigens DSM 2638]
gi|242123129|gb|ACS80825.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio salexigens DSM
2638]
Length = 723
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/326 (33%), Positives = 164/326 (50%), Gaps = 35/326 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L L VA LLAD+++D ++AGLL VE +I ++ D G A ++ +
Sbjct: 46 LAHPLHVAKLLADMRLDEPTVAAGLLHDTVEDTDTTIDEIADLFGEEVADIV-------D 98
Query: 170 NVNLKLQVLDDETAAA-----LRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLM 223
V K+ ++D E+ A +RK L DIR L++ LA RL MR LD+ Y+QL+
Sbjct: 99 GVT-KISMMDFESKAIAKAENIRKMILAMAEDIRVLMVKLADRLHNMRTLDFQKSYKQLL 157
Query: 224 ISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYK 283
I+ E M I++PLA+ + + +LEDL YL P Y + L T K +D
Sbjct: 158 IAQETMDIYSPLANRLGLYMVKRDLEDLCLYYLKPDVYQDITDGLERQHTIGKEYVDNVI 217
Query: 284 EQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSS 343
L L + ++ GR K YS KK+ + ++V D++ RVI++
Sbjct: 218 GLLNGILDNNEIKG------TIYGRTKHIYSIHKKMQRQNLSLDQVYDIIAFRVIVESVK 271
Query: 344 NLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRP 403
+ CY+ ++ S+WK + + KDYI+ PKAN Y+SLH V + G+
Sbjct: 272 D-----------CYSVLGLVHSMWKPISGKFKDYISIPKANMYQSLHTTV-IGPEGER-- 317
Query: 404 LMEIQIRTEEMDMLAVNGTASHAFYK 429
+EIQIRTEEM +A G A+H YK
Sbjct: 318 -IEIQIRTEEMQQVAEYGVAAHWQYK 342
>gi|359687928|ref|ZP_09257929.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Leptospira
licerasiae serovar Varillal str. MMD0835]
gi|418750353|ref|ZP_13306639.1| putative GTP diphosphokinase [Leptospira licerasiae str. MMD4847]
gi|418758451|ref|ZP_13314633.1| GTP diphosphokinase [Leptospira licerasiae serovar Varillal str.
VAR 010]
gi|384114353|gb|EIE00616.1| GTP diphosphokinase [Leptospira licerasiae serovar Varillal str.
VAR 010]
gi|404272956|gb|EJZ40276.1| putative GTP diphosphokinase [Leptospira licerasiae str. MMD4847]
Length = 677
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 170/325 (52%), Gaps = 25/325 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L V +L +L +D +VISAG+L V+E + + + G L+ ++ +
Sbjct: 56 LQVGFILYELGLDEKVISAGILHDVIEDTKYTKEDMVRDFGTEITQLVEGVTKISQ---I 112
Query: 174 KLQVLDDETAAALRKFCL-TYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K Q + E A +RK + T DIR +++ LA + MR L + P +Q I+ E + ++
Sbjct: 113 KSQSKETEAAENIRKIIIATIQDIRVILIKLADKTHNMRTLSFQPPEKQRRIANETLSLY 172
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
AP+A + + ELEDL+F+ +FP Y + + + K + Y E+L LK
Sbjct: 173 APIAGRLGIYSVKSELEDLAFQVIFPEEYQDIKKRI----SAKKSEREDYIEKLQLILK- 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
LA++ + +V+GR K +S +K+ + +E+ D+ +R++ T E+
Sbjct: 228 -QRLAEIQINANVEGRAKHFFSIYRKMKTKEKTFDEIFDLRAIRIV---------TDEI- 276
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY I+ +LW +P R KDYIA PK N Y+SLH V + +GK PL E+QIRT
Sbjct: 277 -KDCYGVLGIVHTLWSPVPGRFKDYIATPKTNMYQSLHTTV-IGPDGK--PL-EVQIRTA 331
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEE 437
EM+ +A G A+H YK G T+ E
Sbjct: 332 EMNAIAEFGIAAHWVYKEGKTHANE 356
>gi|339490030|ref|YP_004704558.1| (p)ppGpp synthetase I SpoT/RelA [Pseudomonas putida S16]
gi|338840873|gb|AEJ15678.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudomonas putida S16]
Length = 702
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 159/321 (49%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + + + G A L+ V
Sbjct: 46 VTHPLAVASILADMHMDHQSLMAAMLHDVIEDTGIAKEALSQQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ + P + ++S K ++ + L
Sbjct: 163 LEIYAPIANRLGMHTVRVEFEDLGFKAMHPMRSSLIHRAVKSARGNRKEIVAKIEHSLAN 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D + V GR K Y KK+ R E+ DV R+++ + V+T
Sbjct: 223 CLAADGIEGE------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIVV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|224531839|ref|ZP_03672471.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
((ppGpp)ase) [Borrelia valaisiana VS116]
gi|224511304|gb|EEF81710.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
((ppGpp)ase) [Borrelia valaisiana VS116]
Length = 667
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 173/353 (49%), Gaps = 41/353 (11%)
Query: 86 LFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVS 145
+FKAL+++ L + + V+L LA Q+D + AGLL V+E +
Sbjct: 40 IFKALEIA-EQLHYGQYRESGEPYIIHPIMVSLFLAKFQLDFKATIAGLLHDVLEDTNIE 98
Query: 146 IQQVRDRI---------GIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRKFCLTYYDI 196
+++ G+ H LH R N ++ F +T+ DI
Sbjct: 99 KEEIVKEFDEEILSLIDGVTKIHDLHNKTRSIKEANTISKMF----------FAMTH-DI 147
Query: 197 RALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYL 256
R +I+ LA +L M L YLP+ +Q I+ + + + P+A + + L LEDLSF++L
Sbjct: 148 RIIIIKLADKLHNMTTLSYLPKNRQDRIAKDCLSTYVPIAERLGISSLKTYLEDLSFKHL 207
Query: 257 FPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTM 316
+P Y + +L ET + +YK +L ++ + + + +++V R K YS
Sbjct: 208 YPKDYKEIKNFLS--ETKIEREKKLYKGKL--SIEKELQKSGIEAEITV--RSKHFYSIF 261
Query: 317 KKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKD 376
+K+ ++ D LG+R+I K ++ CY EI+ +WK +P R KD
Sbjct: 262 RKMQTRTNKLTQIFDTLGIRIICKK-----------QKECYEILEIVHRVWKPIPGRLKD 310
Query: 377 YIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYK 429
YIA PK N Y+SLH V + ++ + L+EIQIRTEEMD +A G A+H YK
Sbjct: 311 YIASPKENKYQSLHTTVRIPEDNQ---LIEIQIRTEEMDRIANYGVAAHWIYK 360
>gi|90961799|ref|YP_535715.1| GTP pyrophosphokinase [Lactobacillus salivarius UCC118]
gi|418961348|ref|ZP_13513235.1| GTP pyrophosphokinase [Lactobacillus salivarius SMXD51]
gi|90820993|gb|ABD99632.1| GTP pyrophosphokinase [Lactobacillus salivarius UCC118]
gi|380345015|gb|EIA33361.1| GTP pyrophosphokinase [Lactobacillus salivarius SMXD51]
Length = 739
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 165/319 (51%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD E +SAG L VVE V++ + + G ++ ++ +
Sbjct: 55 IQVAGILANLKMDPETVSAGFLHDVVEDTKVTLGDIGELFGKDVEVIVDGVTKLSK---I 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + ++ A RK L D+R +I+ LA RL MR L +L +Q I+ E ++I+
Sbjct: 112 RYKSHQEQLAENHRKLLLAMSKDLRVIIVKLADRLHNMRTLSHLRPDKQRRIANETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + + +EL+D+S RYL P Y + + S ID E +++ K
Sbjct: 172 APLADRLGISTIKWELQDMSLRYLNPQQYYRIVHLMNSKREERVHYID---EVIVEIKK- 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+A+L + + GR K YS +K+ + ++ D+ +RVI+K +
Sbjct: 228 --AIAELNIEYDIYGRPKHIYSIYRKMRDQHKQFSQIYDLSAVRVIVKSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKAN Y+SLH V + NG RP E+QIRTE
Sbjct: 278 ---CYAVLGAIHTRWKPMPGRFKDYIAMPKANMYQSLHTTV-IGPNG--RPF-EVQIRTE 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 331 EMHRVAEYGIAAHWAYKEG 349
>gi|365873417|ref|ZP_09412950.1| (p)ppGpp synthetase, RelA/SpoT family [Thermanaerovibrio velox DSM
12556]
gi|363983504|gb|EHM09711.1| (p)ppGpp synthetase, RelA/SpoT family [Thermanaerovibrio velox DSM
12556]
Length = 760
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 167/323 (51%), Gaps = 25/323 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ ++SVA +LAD+++D + + A LL V+E + ++++ R G ++ ++
Sbjct: 86 VVHSISVAAILADMELDVDTLCAALLHDVLEDTEIGKEEMQSRFGEDVVTMVDGVTKLGK 145
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L + ++D A LRK F + DIR +++ LA RL MR L R +Q+ I+ E
Sbjct: 146 ---LAFKSMEDYQAENLRKMFLVMAKDIRVVLIKLADRLHNMRTLQAHRRDKQITIAKET 202
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+APLAH + + ELEDL F+ L P Y + +R + +I + L Q
Sbjct: 203 LEIYAPLAHRLGIYNVKRELEDLCFKILEPEIYYEIRRRVRKKLPEREAIIKQALDVLQQ 262
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
LK + A S+ GR K YS +K+ + E++ D+L LRV++
Sbjct: 263 KLKEEGIEA------SLSGRPKHFYSIYEKMRRKNLSLEQLYDLLALRVVV--------- 307
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
V E CY ++ ++WK +P + DYIA PK+N Y+SLH V G + +E+Q
Sbjct: 308 GTVAE--CYQVLGLVHTIWKPIPGQFDDYIANPKSNMYQSLHTTV----LGPSGEPLEVQ 361
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IRT EM LA G A+H YK G
Sbjct: 362 IRTWEMHWLAEYGIAAHWHYKEG 384
>gi|357639018|ref|ZP_09136891.1| RelA/SpoT family protein [Streptococcus urinalis 2285-97]
gi|418417900|ref|ZP_12991092.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
urinalis FB127-CNA-2]
gi|357587472|gb|EHJ56880.1| RelA/SpoT family protein [Streptococcus urinalis 2285-97]
gi|410869430|gb|EKS17391.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
urinalis FB127-CNA-2]
Length = 739
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 179/364 (49%), Gaps = 28/364 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL +DA ++ G L VVE +++ + G ++ ++ +
Sbjct: 55 IQVAGILADLHLDAVTVACGFLHDVVEDTDITLDDIELDFGKDVRDIVDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E M+I+
Sbjct: 112 EYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELEDL+FRYL + + + + L+D E++
Sbjct: 172 APLAHRLGISRIKWELEDLAFRYLNEVEFYKISHLMSEKRREREALVDEIVEKITTYTNE 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ V GR K YS +K+ + +++ D++ +R I++ +S++
Sbjct: 232 QGLYGE------VYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCIMETASDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQIRT+
Sbjct: 279 ----YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQIRTK 329
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNHKGFEFDWR 472
+M +A G A+H YK G+ K M EL + L+D + + K F +
Sbjct: 330 DMHAVAEYGVAAHWAYKKGIKGKVNQAEQKVGMNWINEL--VELQDASNGDAKDFVDSVK 387
Query: 473 DRVF 476
+ +F
Sbjct: 388 EEIF 391
>gi|70733346|ref|YP_263121.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pseudomonas protegens Pf-5]
gi|68347645|gb|AAY95251.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [Pseudomonas
protegens Pf-5]
Length = 701
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 160/321 (49%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + + + G A L+ V
Sbjct: 46 VTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALSAQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ + P + ++ K +++ +E L
Sbjct: 163 LEIYAPIANRLGMHAIRIEFEDLGFKAMHPMRSARIYQAVKRARGNRKEIVNKIEESLSH 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D + V GR K Y KK+ R E+ DV R+I+ + V+T
Sbjct: 223 CLAIDGIQGE------VSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|301301212|ref|ZP_07207368.1| GTP diphosphokinase [Lactobacillus salivarius ACS-116-V-Col5a]
gi|300851211|gb|EFK78939.1| GTP diphosphokinase [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 739
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 165/319 (51%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD E +SAG L VVE V++ + + G ++ ++ +
Sbjct: 55 IQVAGILANLKMDPETVSAGFLHDVVEDTKVTLGDIGELFGKDVEVIVDGVTKLSK---I 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + ++ A RK L D+R +I+ LA RL MR L +L +Q I+ E ++I+
Sbjct: 112 RYKSHQEQLAENHRKLLLAMSKDLRVIIVKLADRLHNMRTLSHLRPDKQRRIANETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + + +EL+D+S RYL P Y + + S ID E +++ K
Sbjct: 172 APLADRLGISTIKWELQDMSLRYLNPQQYYRIVHLMNSKREERVHYID---EVIVEIKK- 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+A+L + + GR K YS +K+ + ++ D+ +RVI+K +
Sbjct: 228 --AIAELNIEYDIYGRPKHIYSIYRKMRDQHKQFSQIYDLSAVRVIVKSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKAN Y+SLH V + NG RP E+QIRTE
Sbjct: 278 ---CYAVLGAIHTRWKPMPGRFKDYIAMPKANMYQSLHTTV-IGPNG--RPF-EVQIRTE 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 331 EMHRVAEYGIAAHWAYKEG 349
>gi|227890819|ref|ZP_04008624.1| GTP pyrophosphokinase [Lactobacillus salivarius ATCC 11741]
gi|227867228|gb|EEJ74649.1| GTP pyrophosphokinase [Lactobacillus salivarius ATCC 11741]
Length = 739
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 165/319 (51%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD E +SAG L VVE V++ + + G ++ ++ +
Sbjct: 55 IQVAGILANLKMDPETVSAGFLHDVVEDTKVTLGDIGELFGKDVEVIVDGVTKLSK---I 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + ++ A RK L D+R +I+ LA RL MR L +L +Q I+ E ++I+
Sbjct: 112 RYKSHQEQLAENHRKLLLAMSKDLRVIIVKLADRLHNMRTLSHLRPDKQRRIANETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + + +EL+D+S RYL P Y + + S ID E +++ K
Sbjct: 172 APLADRLGISTIKWELQDMSLRYLNPQQYYRIVHLMNSKREERVHYID---EVIVEIKK- 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+A+L + + GR K YS +K+ + ++ D+ +RVI+K +
Sbjct: 228 --AIAELNIEYDIYGRPKHIYSIYRKMRDQHKQFSQIYDLSAVRVIVKSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKAN Y+SLH V + NG RP E+QIRTE
Sbjct: 278 ---CYAVLGAIHTRWKPMPGRFKDYIAMPKANMYQSLHTTV-IGPNG--RPF-EVQIRTE 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 331 EMHRVAEYGIAAHWAYKEG 349
>gi|241764060|ref|ZP_04762098.1| (p)ppGpp synthetase I, SpoT/RelA [Acidovorax delafieldii 2AN]
gi|241366591|gb|EER61072.1| (p)ppGpp synthetase I, SpoT/RelA [Acidovorax delafieldii 2AN]
Length = 759
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 168/333 (50%), Gaps = 25/333 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++VA A ++DA+ + A LL +E GV+ + DR G A L+ ++
Sbjct: 79 ITHPIAVAAQCASWKLDAQALMAALLHDAMEDCGVTKADLIDRFGAPVAELVDGLTKLDK 138
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+ ++ A + RK L D+R +++ LA R MR L +PR + IS E
Sbjct: 139 ---LQFNTREENQAESFRKMLLAMARDVRVILIKLADRTHNMRTLSDMPRSKWGRISSET 195
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+AH + N EL+DLSFR+L P+ Y + + + L+ + ++
Sbjct: 196 LEIYAPIAHRLGLNQTYRELQDLSFRHLHPWRYRTLSKAINKSRNRRRDLVQKVQSEV-- 253
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
DA + + V + GR K+ Y+ +K+ +V D+ G RVI+ ++
Sbjct: 254 ----DAAFSRIGMPVRLAGREKTLYAIYQKMDLKHLSFAQVTDIYGFRVIVPSVTD---- 305
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CYT I+ ++K +P + KD+IA PK NGY+SLH + V +G +E Q
Sbjct: 306 -------CYTALGILHQMYKPVPGKFKDHIAIPKLNGYQSLHTTL-VGPSGVN---IEFQ 354
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRL 441
+RT+EM ++A G A+H YK + A+RL
Sbjct: 355 MRTDEMHVIAEAGVAAHWLYKAQDSEGNSAERL 387
>gi|150390117|ref|YP_001320166.1| (p)ppGpp synthetase I SpoT/RelA [Alkaliphilus metalliredigens QYMF]
gi|149949979|gb|ABR48507.1| (p)ppGpp synthetase I, SpoT/RelA [Alkaliphilus metalliredigens
QYMF]
Length = 727
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/323 (33%), Positives = 162/323 (50%), Gaps = 33/323 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L +L+MD+ I+AGLL V+E +VR+ G A L+ ++ L
Sbjct: 48 VEVAKILIELKMDSSTIAAGLLHDVIEDTPYGYGKVREEFGEEVAELVEGVTKL---TRL 104
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ ++ A LRK F DIR +++ LA RL MR L Y ++ ++E ++I
Sbjct: 105 SFESKEERQAENLRKMFIAMAKDIRVVLIKLADRLHNMRTLKYQSDEKKKEKAMETLEIF 164
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYL-FVDTWL---RSHETGSKPLIDIYKEQLLQ 288
AP+AH + + + +ELEDL Y+ P Y VD R ET +I I
Sbjct: 165 APIAHRLGISRIKWELEDLCLLYIDPEGYYDLVDKVAKKRRDRETFINKVISI------- 217
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
D + + + + GR K YS +K++ + +E+ D + RVI+ +N+
Sbjct: 218 ---LDGKMDEFGIENEISGRPKHFYSIYRKMVYQNKSFDEIFDFIAFRVIV---NNV--- 268
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
+ CY I+ +LWK +P R KDYIA PK N Y+SLH V + NG+ EIQ
Sbjct: 269 -----KDCYGILGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTV-IGPNGEP---FEIQ 319
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IRT+EM +A G A+H YK G
Sbjct: 320 IRTKEMHQIAEFGIAAHWSYKEG 342
>gi|406669587|ref|ZP_11076856.1| RelA/SpoT family protein [Facklamia ignava CCUG 37419]
gi|405582979|gb|EKB56951.1| RelA/SpoT family protein [Facklamia ignava CCUG 37419]
Length = 730
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 169/323 (52%), Gaps = 25/323 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ ++ VA +LA+L MD + I+ G L VVE + + ++ +R A L+ ++
Sbjct: 50 IIHSIQVAGILAELHMDPDTIATGFLHDVVEDTEIELDEIAERFSETVAFLVDGVTKLGK 109
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
LK Q + A RK L D+R +I+ LA RL MR + Y +Q+ S E
Sbjct: 110 ---LKFQSKQEALAENHRKMLLAMAKDMRVIIVKLADRLHNMRTMKYQSPEKQIEKSQEA 166
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+APLA + + + +ELED++ RY+ +Y + + S + I E+ +Q
Sbjct: 167 IEIYAPLADRLGISSIKWELEDIALRYINKDAYYDIVKKMDSKRVEREAFI----EKTIQ 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
++ ++ DL + + GR K YS +K++ + +++ D+L +RVI+ P+
Sbjct: 223 DIQ--GSIEDLNIEAEIYGRPKHIYSIYRKMVDQKKDFDDIYDLLAIRVIV-PTI----- 274
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
+ CY + + WK MP R KDYIA PKAN Y+S+H V + +NGK +EIQ
Sbjct: 275 -----KDCYAVLGAVHTRWKPMPGRFKDYIAMPKANMYQSIHTTV-IGNNGKP---VEIQ 325
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IRT +M ++ G A+H YK G
Sbjct: 326 IRTHQMHDVSEYGVAAHWAYKEG 348
>gi|326201899|ref|ZP_08191769.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium papyrosolvens DSM
2782]
gi|325987694|gb|EGD48520.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium papyrosolvens DSM
2782]
Length = 726
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 168/330 (50%), Gaps = 32/330 (9%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA++LA++++D + A LL +E + Q++ + G A L+ ++ +
Sbjct: 51 VEVAIILAEIELDCTALVAALLHDTIEDTTCTYDQLKAQFGQEVAELVDGVTKLGK---I 107
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+++ LRK F DIR +++ LA RL MR L+Y+ + +QL + E ++I+
Sbjct: 108 PFTTKEEQQVENLRKMFLAMAKDIRVIMIKLADRLHNMRTLNYMTQDKQLEKARETLEIY 167
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYL----FVDTWLRSHETGSKPLIDIYKEQLLQ 288
APLAH + + + +ELED+ RYL P Y ++T + E +ID +E+
Sbjct: 168 APLAHRLGISKIKWELEDICLRYLDPKGYYDLVEKINTKRKQREAYITIIIDTLREK--- 224
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
T +E+ + GR K YS +K++K + +++ D+ R+I+ +
Sbjct: 225 ------TNELRIENAQIDGRPKHFYSIYRKMVKQNKTLDQIYDLFAFRIIVNSVKD---- 274
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY ++ L+K MP R KDYIA PK N Y+SLH + + G+ E+Q
Sbjct: 275 -------CYAVLGLVHELYKPMPGRFKDYIAMPKPNMYQSLHTTL-IGPEGQP---FEVQ 323
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEA 438
IRT +M +A G A+H YK G+ N +++
Sbjct: 324 IRTWDMHRVAEVGIAAHWKYKEGINNAKDS 353
>gi|218441725|ref|YP_002380054.1| (p)ppGpp synthetase I SpoT/RelA [Cyanothece sp. PCC 7424]
gi|218174453|gb|ACK73186.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. PCC 7424]
Length = 749
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/327 (34%), Positives = 166/327 (50%), Gaps = 26/327 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRV-K 168
+ ++VA LL DL D+ +I+AG L VVE V+++++ +R G+ L+ ++ K
Sbjct: 66 IAHPVAVAGLLRDLGGDSTMIAAGFLHDVVEDTEVTLEEIEERFGLEVRQLVEGVTKLSK 125
Query: 169 NNVNLKLQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
N + K + + R F DIR +++ LA RL MR L++L +Q I+LE
Sbjct: 126 FNFSSKTE---RQAENFRRMFLAMAKDIRVIVVKLADRLHNMRTLEHLAPEKQCRIALET 182
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+I APLA+ + +ELEDL F+YL P +Y + T + + ID E L +
Sbjct: 183 REIFAPLANRLGIGRFKWELEDLCFKYLEPEAYREIQTLVAEKRVDRETRIDKISETLRE 242
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L V+ + +QGR K Y K+ + + E+ D+ LR+ LV T
Sbjct: 243 RLYQIG-----VKVLEIQGRPKHLYGIYDKMQRQHKEFHEIYDIAALRI-------LVET 290
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
E CY I+ ++K +P R KDYI PK N Y+SLH V V N RPL E+Q
Sbjct: 291 KE----ECYRALAIVHDVFKPIPGRFKDYIGLPKPNRYQSLHTTV-VGLN--CRPL-EVQ 342
Query: 409 IRTEEMDMLAVNGTASHAFYK--GGLT 433
IRT EM +A G A+H YK GG T
Sbjct: 343 IRTLEMHHIAEYGIAAHWKYKETGGST 369
>gi|88705448|ref|ZP_01103159.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Congregibacter litoralis KT71]
gi|88700538|gb|EAQ97646.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Congregibacter litoralis KT71]
Length = 705
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/321 (32%), Positives = 157/321 (48%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G+ + + G A L+ V
Sbjct: 46 VTHPLAVAGILADMHMDHQSLMAAMLHDVIEDTGIDKTAIESQFGEAVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ L+++ A +K L DIR +++ LA RL MR L LP + I+ E
Sbjct: 103 LTQIEFDTLEEKQAENFQKMALAMARDIRVILVKLADRLHNMRTLGVLPTAKARRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+AP+A + N + E EDL F L+P ++ RS L+D + Q+
Sbjct: 163 LDIYAPIAMRLGMNAVRMEFEDLGFTALYPMRARRIEAARRSARGNRIELVDKMRSQIEN 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L D + +V GR K YS KK+ + E+ D+ RV++
Sbjct: 223 ALAQDGY------EATVIGREKHLYSIYKKMRAKKKSFSEIMDIYAFRVVVDSVD----- 271
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
+CY I SL+K +P KDYIA PKANGY+SLH V + +G +EIQ
Sbjct: 272 ------SCYRVLGCIHSLYKPVPGEFKDYIAIPKANGYQSLH-TVTMGMHGVP---IEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEDMANNGIAAHWLYK 342
>gi|417810298|ref|ZP_12456977.1| GTP pyrophosphokinase [Lactobacillus salivarius GJ-24]
gi|335349094|gb|EGM50594.1| GTP pyrophosphokinase [Lactobacillus salivarius GJ-24]
Length = 750
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 165/319 (51%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD E +SAG L VVE V++ + + G ++ ++ +
Sbjct: 66 IQVAGILANLKMDPETVSAGFLHDVVEDTKVTLGDIGELFGKDVEVIVDGVTKLSK---I 122
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + ++ A RK L D+R +I+ LA RL MR L +L +Q I+ E ++I+
Sbjct: 123 RYKSHQEQLAENHRKLLLAMSKDLRVIIVKLADRLHNMRTLSHLRPDKQRRIANETLEIY 182
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + + +EL+D+S RYL P Y + + S ID E +++ K
Sbjct: 183 APLADRLGISTIKWELQDMSLRYLNPQQYYRIVHLMNSKREERVHYID---EVIVEIKK- 238
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+A+L + + GR K YS +K+ + ++ D+ +RVI+K +
Sbjct: 239 --AIAELNIEYDIYGRPKHIYSIYRKMRDQHKQFSQIYDLSAVRVIVKSIKD-------- 288
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKAN Y+SLH V + NG RP E+QIRTE
Sbjct: 289 ---CYAVLGAIHTRWKPMPGRFKDYIAMPKANMYQSLHTTV-IGPNG--RPF-EVQIRTE 341
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 342 EMHRVAEYGIAAHWAYKEG 360
>gi|384218336|ref|YP_005609502.1| GTP pyrophosphokinase [Bradyrhizobium japonicum USDA 6]
gi|354957235|dbj|BAL09914.1| GTP pyrophosphokinase [Bradyrhizobium japonicum USDA 6]
Length = 751
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 163/329 (49%), Gaps = 25/329 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ L VA +L DL++D I A LL +E + ++ G L+ ++K
Sbjct: 71 FSHPLEVAAILTDLKLDDATIVAALLHDTIEDTEATRAEIDQIFGPEIGALVEGLTKLKR 130
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+L + + A LRK L D +R L++ LA RL MR LD++P + I+ E
Sbjct: 131 ---LELVSREAKQAENLRKLLLAIADDVRVLLVKLADRLHNMRTLDFVPPESRRRIAEET 187
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+APLA + + ELEDLSFR L P +Y V L + ++ LI ++QL
Sbjct: 188 LDIYAPLAGRMGMQEMREELEDLSFRTLDPEAYSVVMQRLDALAERNRNLIGEIEDQLSN 247
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L+ A V GR K +S K+ + E+++D+ G R++ VN
Sbjct: 248 NLRHRGLGA------RVYGRRKKPFSIWTKMERKSVGFEQLSDIFGFRLV-------VND 294
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
E ACY I+ + W +P R KDYI+ PK N YRS+H V N + +E+Q
Sbjct: 295 IE----ACYRALGIVHTNWPVVPGRFKDYISTPKQNDYRSIHTTVIGPGNQR----VELQ 346
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
IRTE MD +A G A+H FYK + +P E
Sbjct: 347 IRTEAMDQIAERGIAAHVFYKEDVGSPTE 375
>gi|260495168|ref|ZP_05815296.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [Fusobacterium
sp. 3_1_33]
gi|260197225|gb|EEW94744.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [Fusobacterium
sp. 3_1_33]
Length = 369
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/324 (32%), Positives = 172/324 (53%), Gaps = 33/324 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +L D++MD + I AGLL VVE + I ++ G A L+ +
Sbjct: 46 IVHPVEVAKILMDMKMDTDTIVAGLLHDVVEDTLIPIADIKYNFGDTVATLV-------D 98
Query: 170 NVNLKLQVLDDET---AAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMIS 225
V KL+ L + T A +RK L +IR +++ LA RL MR L ++ +Q IS
Sbjct: 99 GVT-KLKALPNGTKNQAENIRKMILAMAENIRVILIKLADRLHNMRTLKFMKPEKQQSIS 157
Query: 226 LEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQ 285
E + I+APLAH + + ELED++F YL +L + + + + K I+ +
Sbjct: 158 KETLDIYAPLAHRLGMAKVKSELEDIAFSYLHHDEFLEIKRLVDNTKEERKDYIENFIRT 217
Query: 286 LLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNL 345
+++ TL++L V+GR+K YS +K+ + G+ +++ D++G+RVI++ +
Sbjct: 218 MIR------TLSELGIKAEVKGRFKHFYSIYRKMYQKGKEFDDIYDLMGVRVIVEDKA-- 269
Query: 346 VNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLM 405
CY I+ S + +P R KDYIA PK+N Y+S+H + V GK +
Sbjct: 270 ---------TCYHVLGIVHSQYTPVPGRFKDYIAVPKSNNYQSIHTTI-VGPLGK---FI 316
Query: 406 EIQIRTEEMDMLAVNGTASHAFYK 429
EIQIRT++MD +A G A+H YK
Sbjct: 317 EIQIRTKDMDDIAEEGIAAHWNYK 340
>gi|48425924|pdb|1VJ7|A Chain A, Crystal Structure Of The Bifunctional Catalytic Fragment
Of Relseq, The RelaSPOT HOMOLOG FROM STREPTOCOCCUS
EQUISIMILIS.
gi|48425925|pdb|1VJ7|B Chain B, Crystal Structure Of The Bifunctional Catalytic Fragment
Of Relseq, The RelaSPOT HOMOLOG FROM STREPTOCOCCUS
EQUISIMILIS
Length = 393
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 172/343 (50%), Gaps = 26/343 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL +DA ++ G L VVE +++ + G ++ ++ +
Sbjct: 55 IQVAGILADLHLDAVTVACGFLHDVVEDTDITLDNIEFDFGKDVRDIVDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E M+I+
Sbjct: 112 EYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELEDL+FRYL + + + + L+D ++ +K+
Sbjct: 172 APLAHRLGISRIKWELEDLAFRYLNETEFYKISHMMNEKRREREALVD----DIVTKIKS 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
T L DV GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 228 YTTEQGLFGDVY--GRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCVMETQSDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQIRT+
Sbjct: 279 ----YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQIRTK 329
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALR 455
EM +A G A+H YK G+ K M EL L+
Sbjct: 330 EMHQVAEYGVAAHWAYKKGVRGKVNQAEQKVGMNWIKELVELQ 372
>gi|356570978|ref|XP_003553659.1| PREDICTED: GTP pyrophosphokinase-like [Glycine max]
Length = 882
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/367 (30%), Positives = 178/367 (48%), Gaps = 43/367 (11%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVE-SGGVSIQQVRDRIGIGTAHLLHESLRVKNNVN 172
+ VA +L +L++D E I+AGLL VE + V+ +++ + G H++ +V
Sbjct: 174 VEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRHIVEGETKVSKLGK 233
Query: 173 LKLQ----VLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLE 227
LK + + D A LR+ F ++R +I+ LA RL MR L ++P ++Q I++E
Sbjct: 234 LKYKNENDSVQDVKAEDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQTSIAME 293
Query: 228 VMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLL 287
+++ APLA + + ELE+LSF Y Y V + + ++YKE
Sbjct: 294 TLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVK----------RRVAELYKEHEK 343
Query: 288 QCLKTDATLADLVED----------VSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRV 337
+ L+ + L ++D V+ K YS K +LK E+N + LR+
Sbjct: 344 ELLEANKMLMKKIQDDQFLDLLTVKTKVRAVCKEPYSIYKAVLKSKSSISEINQIAQLRI 403
Query: 338 IIKPSSN-----LVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMA 392
IIKP L N ++ CY +I +W +P KDYIA PK NGY+SL
Sbjct: 404 IIKPKQCIGVGPLCNPQQI----CYHVLGLIHGIWTPIPRSVKDYIATPKPNGYQSLQTT 459
Query: 393 VDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYK-------GGLTNPEEAKRLKAIM 445
V + ++ +E+QIRTEEMD++A G A+H + G T ++ R K +
Sbjct: 460 V-IPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGREFVTGLVGSATPSSKSSRGKTVC 518
Query: 446 LAAAELA 452
L A +A
Sbjct: 519 LNNANIA 525
>gi|329121021|ref|ZP_08249652.1| GTP diphosphokinase [Dialister micraerophilus DSM 19965]
gi|327471183|gb|EGF16637.1| GTP diphosphokinase [Dialister micraerophilus DSM 19965]
Length = 783
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 163/322 (50%), Gaps = 25/322 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
LSVA +L++L++D I A LL V E +++ + ++ G A L+ ++
Sbjct: 109 LSVAYILSELELDRNAIVAALLHDVAEDTDTTLEDIENQFGKEIAFLVDGVTKLSQ---F 165
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +D+ +K F D+R +I+ LA RL MR L + ++ ++ E ++I+
Sbjct: 166 KYKNKEDQQLENFQKMFLAMAEDVRVVIIKLADRLHNMRTLWVFRKEKRQRVAKETIEIY 225
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + +ELEDL F YL+P Y + + +R + ++ E + LK
Sbjct: 226 APLAHRLGIYNIKWELEDLCFHYLYPEDYYDLVSQMREKRQVREAIV----EDTMHVLKE 281
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
++ + GR K YS KK+ +D R ++ D+ +RVI+
Sbjct: 282 KIDETNI--KAVITGRPKHFYSIYKKMKRDNRELSQIYDLYAVRVIVDTIPQ-------- 331
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I+ SLWK +P R KDYIA PK N Y+SLH + + K +P+ EIQIRT
Sbjct: 332 ---CYAVLGIVHSLWKPLPKRFKDYIAVPKPNMYQSLHTTIIGT---KGQPV-EIQIRTW 384
Query: 413 EMDMLAVNGTASHAFYKGGLTN 434
EM ++ G A+H YK G +N
Sbjct: 385 EMHHVSEYGIAAHWRYKEGNSN 406
>gi|312880418|ref|ZP_07740218.1| (p)ppGpp synthetase I, SpoT/RelA [Aminomonas paucivorans DSM 12260]
gi|310783709|gb|EFQ24107.1| (p)ppGpp synthetase I, SpoT/RelA [Aminomonas paucivorans DSM 12260]
Length = 760
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/327 (33%), Positives = 170/327 (51%), Gaps = 33/327 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ +SVA +LAD+++D E +SA LL V+E V +++R G L+ ++
Sbjct: 91 VVHTISVASILADMELDVETLSAALLHDVLEDTPVGDAVLKERFGPEVLTLVDGVTKLGK 150
Query: 170 NVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L + ++D A LRK F + DIR +++ LA RL MR L R +QL I+ E
Sbjct: 151 ---LPFKSIEDYQAENLRKMFLVMAKDIRVVLIKLADRLHNMRTLQAHRRDRQLAIAKET 207
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRS----HETGSKPLIDIYKE 284
++I+APLAH + + ELEDLSF+ L P Y + +R E K +DI ++
Sbjct: 208 LEIYAPLAHRLGIYQVKRELEDLSFKILDPEIYYEIRRRVRKKLPEREAIIKQALDILQQ 267
Query: 285 QLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSN 344
+LL+ + VE S+ GR K YS +K+ + +++ D+L LRV++
Sbjct: 268 RLLE---------EGVE-ASLNGRPKHFYSIYEKMRRKNLSLDQLYDLLALRVVVG---- 313
Query: 345 LVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPL 404
G CY ++ ++WK +P + DYIA PK+N Y+SLH V G +
Sbjct: 314 -------GLAECYQVLGLVHTIWKPIPGQFDDYIANPKSNMYQSLHTTV----LGPSGEP 362
Query: 405 MEIQIRTEEMDMLAVNGTASHAFYKGG 431
+E+QIRT EM LA G A+H YK G
Sbjct: 363 LEVQIRTWEMHRLAEYGIAAHWHYKEG 389
>gi|192360692|ref|YP_001983035.1| GTP pyrophosphokinase [Cellvibrio japonicus Ueda107]
gi|190686857|gb|ACE84535.1| GTP pyrophosphokinase [Cellvibrio japonicus Ueda107]
Length = 748
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/326 (32%), Positives = 159/326 (48%), Gaps = 29/326 (8%)
Query: 113 ALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRV----- 167
L +A +LADLQ+D + + A +L + V V++ +++ G A L+ LR+
Sbjct: 70 GLEMAEILADLQLDQDALVAAMLYRAVRENKVALPEIQKHFGDTVAKLVKGVLRMAAISY 129
Query: 168 --KNNVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMI 224
K L E A +RK + D +R ++ LA R +R + ++ +
Sbjct: 130 QRKEGEERVLGSQAVEQAEKIRKMLVAMVDDVRVALIKLAERTCAIRSVKNASPDRRRQV 189
Query: 225 SLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKE 284
+ EV I+APLAH + ++ +ELEDLSFRYL P Y + L + ID
Sbjct: 190 AREVADIYAPLAHRLGIGHIKWELEDLSFRYLQPEEYKRIAKLLDERRLARQEYID---- 245
Query: 285 QLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSN 344
+L L+ + A + D V GR K YS +K+ + G +V D+ +R+++ P+
Sbjct: 246 NMLALLRNELHKAGI--DGEVSGRAKHIYSIWRKMQRKGIPFSQVYDIRAVRILV-PTV- 301
Query: 345 LVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPL 404
R CY I+ SLW+ +PH DYIA PK NGYRSLH AV G +
Sbjct: 302 ---------RDCYAVLGIVHSLWRNIPHEFDDYIASPKENGYRSLHTAV----WGPENKV 348
Query: 405 MEIQIRTEEMDMLAVNGTASHAFYKG 430
+EIQIRT EM + G +H YKG
Sbjct: 349 LEIQIRTREMHEESELGVCAHWRYKG 374
>gi|320352953|ref|YP_004194292.1| (p)ppGpp synthetase I SpoT/RelA [Desulfobulbus propionicus DSM
2032]
gi|320121455|gb|ADW17001.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfobulbus propionicus DSM
2032]
Length = 721
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 165/320 (51%), Gaps = 26/320 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA LA +++D + I AGLL ++ + ++++ + G A+++ + R+ NV
Sbjct: 50 LAVASSLASMKLDLDTIVAGLLHGTLKEQVATHEELKKKFGNDVANIVDGATRI-TNVRY 108
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
Q+ + A +RK L DIR L++ LA RL M +LD + ++ S E M ++
Sbjct: 109 NSQLAHE--AENIRKLLLAMGADIRVLLVKLADRLQDMLNLDAVREEERRAKSRETMDLY 166
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + +L ELEDL+F+YL P Y + L S + +D E L + L+
Sbjct: 167 APLASRIGIEWLKRELEDLAFKYLLPVEYADLTAHLESTLAERQAYVDEVIEILHEKLR- 225
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIP-EEVNDVLGLRVIIKPSSNLVNTSEV 351
A+ + V + GR K YS KKL+ RIP E V D + R+I++
Sbjct: 226 ----ANKIVPVRIIGRPKHIYSIYKKLVAQ-RIPLERVYDKVAFRIIVRTV--------- 271
Query: 352 GERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRT 411
+ CY + + W +P R KD+I+ PK+N Y+SLH V G +EIQIRT
Sbjct: 272 --KECYQALGTVHADWTPVPGRIKDWISAPKSNNYQSLHTTV----AGPHGHFIEIQIRT 325
Query: 412 EEMDMLAVNGTASHAFYKGG 431
EEMD +A G A+H YK G
Sbjct: 326 EEMDRVAQEGVAAHWAYKEG 345
>gi|224534404|ref|ZP_03674982.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Borrelia
spielmanii A14S]
gi|224514506|gb|EEF84822.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Borrelia
spielmanii A14S]
Length = 667
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 173/353 (49%), Gaps = 41/353 (11%)
Query: 86 LFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVS 145
+FKAL+++ L + + V+L LA Q+D + AGLL V+E +
Sbjct: 40 IFKALEIA-EQLHYGQYRESGEPYIIHPIMVSLFLAKFQLDFKATIAGLLHDVLEDTNIE 98
Query: 146 IQQVRDRI---------GIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRKFCLTYYDI 196
+++ G+ H LH R N ++ F +T+ DI
Sbjct: 99 KEEIVREFDEEILSLIDGVTKIHDLHNKTRSIKEANTISKMF----------FAMTH-DI 147
Query: 197 RALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYL 256
R +I+ LA +L M L YLP+ +Q I+ + + + P+A + + L LEDLSF++L
Sbjct: 148 RIIIIKLADKLHNMTTLSYLPKNRQDRIAKDCLSTYVPIAERLGISSLKTYLEDLSFKHL 207
Query: 257 FPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTM 316
+P Y + +L ET + +YK +L ++ + + + +++V R K YS
Sbjct: 208 YPKDYKEIKNFLS--ETKIEREKKLYKGKL--SIEKELQKSGIEAEITV--RSKHFYSIF 261
Query: 317 KKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKD 376
+K+ ++ D LG+R+I K ++ CY EI+ +WK +P R KD
Sbjct: 262 RKMQTRTNKLTQIFDTLGIRIICKK-----------QKECYEILEIVHRVWKPIPGRLKD 310
Query: 377 YIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYK 429
YIA PK N Y+SLH V + ++ + L+EIQIRTEEMD +A G A+H YK
Sbjct: 311 YIASPKENKYQSLHTTVRIPEDNQ---LIEIQIRTEEMDRIANYGVAAHWIYK 360
>gi|306830425|ref|ZP_07463595.1| GTP diphosphokinase [Streptococcus gallolyticus subsp. gallolyticus
TX20005]
gi|325977390|ref|YP_004287106.1| GTP pyrophosphokinase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|304427450|gb|EFM30552.1| GTP diphosphokinase [Streptococcus gallolyticus subsp. gallolyticus
TX20005]
gi|325177318|emb|CBZ47362.1| GTP pyrophosphokinase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 739
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/330 (31%), Positives = 169/330 (51%), Gaps = 30/330 (9%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL +D ++ G L VVE V++ + G ++ ++ +
Sbjct: 55 IQVAGILADLHLDVVTVACGFLHDVVEDTEVTLDDIEAEFGKDVRDIVDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E M+I+
Sbjct: 112 EYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELEDLSFRYL + + + + L+D ++++ +K
Sbjct: 172 APLAHRLGISRIKWELEDLSFRYLNEIEFYKISHMMNEKRREREALVD----EIVKKIKD 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
L +V GR K YS +K+ + +++ D++ +R I++ S++
Sbjct: 228 YTQEQGLYGEVY--GRPKHIYSIYRKMRDKKKRFDQIYDLIAIRCIMETPSDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQIRT+
Sbjct: 279 ----YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQIRTK 329
Query: 413 EMDMLAVNGTASHAFYKGGLT----NPEEA 438
EM +A G A+H YK G+ N E+A
Sbjct: 330 EMHQVAEYGVAAHWAYKQGIKGKVDNQEQA 359
>gi|356503913|ref|XP_003520744.1| PREDICTED: GTP pyrophosphokinase-like [Glycine max]
Length = 882
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/367 (30%), Positives = 178/367 (48%), Gaps = 43/367 (11%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVE-SGGVSIQQVRDRIGIGTAHLLHESLRVKNNVN 172
+ VA +L +L++D E I+AGLL VE + V+ +++ + G H++ +V
Sbjct: 174 VEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRHIVEGETKVSKLGK 233
Query: 173 LKLQ----VLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLE 227
LK + + D A LR+ F ++R +I+ LA RL MR L ++P ++Q I++E
Sbjct: 234 LKYKNENDSVQDVKAEDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQTSIAME 293
Query: 228 VMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLL 287
+++ APLA + + ELE+LSF Y Y V + + ++YKE
Sbjct: 294 TLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKV----------KRRVAELYKEHEK 343
Query: 288 QCLKTDATLADLVED----------VSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRV 337
+ L+ + L ++D V+ K YS K +LK E+N + LR+
Sbjct: 344 ELLEANKMLMKKIQDDQFLDLLTVKTEVRAVCKEPYSIYKAVLKSKSSINEINQIAQLRI 403
Query: 338 IIKPSSN-----LVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMA 392
IIKP L N ++ CY +I +W +P KDYIA PK NGY+SL
Sbjct: 404 IIKPKQCIGVGPLCNPQQI----CYHVLGLIHGIWTPIPRSVKDYIATPKPNGYQSLQTT 459
Query: 393 VDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYK-------GGLTNPEEAKRLKAIM 445
V + ++ +E+QIRTEEMD++A G A+H + G T ++ R K +
Sbjct: 460 V-IPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGREFVTGLVGSATPSSKSSRGKTVC 518
Query: 446 LAAAELA 452
L A +A
Sbjct: 519 LNNANIA 525
>gi|452850965|ref|YP_007492649.1| GTP pyrophosphokinase [Desulfovibrio piezophilus]
gi|451894619|emb|CCH47498.1| GTP pyrophosphokinase [Desulfovibrio piezophilus]
Length = 724
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 176/358 (49%), Gaps = 36/358 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ ++VA LLAD+Q+D ++AGLL VE ++ ++ + G A ++ ++ +
Sbjct: 46 ISHPMNVANLLADMQLDEATVAAGLLHDTVEDTDTTVDEIEELFGSDVADIVDGVTKI-S 104
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ + + + + A +RK L DIR L++ LA RL MR L Y+ +Q +I+ E
Sbjct: 105 KMDFESKAV--QQAENIRKLILAMAEDIRVLMVKLADRLHNMRTLQYMKPVKQRLIAQET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
I+APLA+ + + + ELEDL RYL P + + + H +P ID + +
Sbjct: 163 QDIYAPLANRLGLHRVKTELEDLCLRYLKPDVFEQLTDAVSEHRAAGEPYIDKVIDLIQN 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L + V GR K +S K+ + G +E+ D++ R+I+ +
Sbjct: 223 MLNKNKIKG------RVYGRTKHFHSIHVKMEQQGLTFDEIYDLIAFRIIVDSLKD---- 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY+ +I + W+ +P R KDYI+ PKAN Y+SLH V D + +E+Q
Sbjct: 273 -------CYSVLGLIHAAWRPVPGRFKDYISIPKANMYQSLHSTVIGPDGER----IEVQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK-----------GGLTNPEEAKRLKAIMLAAAELAALR 455
IRT+EM+ +A G A+H YK G + E LK IM EL+ R
Sbjct: 322 IRTDEMNQIAEYGVAAHWQYKEVGKGIKKGKTAGTRDAERYTWLKQIMDWQRELSDPR 379
>gi|302339536|ref|YP_003804742.1| (p)ppGpp synthetase I SpoT/RelA [Spirochaeta smaragdinae DSM 11293]
gi|301636721|gb|ADK82148.1| (p)ppGpp synthetase I, SpoT/RelA [Spirochaeta smaragdinae DSM
11293]
Length = 668
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 163/318 (51%), Gaps = 27/318 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L VA L DL +D E I A LL V+E + + ++R R G L+ ++ +
Sbjct: 50 LHVAEFLIDLGLDQEAIIAALLHDVLEDTDIELPELRKRFGKQIGALVDGVTKISI---V 106
Query: 174 KLQVLDDETAAALRK--FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKI 231
K + + A +RK F +T DIR +I+ LA + M L+YL ++ I+ E + I
Sbjct: 107 KAKSKSVQEAETIRKMLFAMTR-DIRVIIIKLADKYHNMSTLEYLSPEKRKAIATECLDI 165
Query: 232 HAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLK 291
+APLA + ++L ELEDL+ ++L P ++ +++ ++ S +T + + LL+
Sbjct: 166 YAPLADRLGISWLKAELEDLALKHLNPSAWEYINQFVASKKTERANYLKKIERTLLK--- 222
Query: 292 TDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEV 351
A A+ + D+ V R K YS K+ + + E+ D+LG+R+I +S
Sbjct: 223 --AAAAEKI-DIEVMARAKHLYSIYLKMKRRKKDISEIYDLLGIRIICSTTSE------- 272
Query: 352 GERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRT 411
CYT ++ LW + R KDYIA PKAN Y+SLH V D L+EIQIRT
Sbjct: 273 ----CYTLLGVVHKLWPPIEGRFKDYIAMPKANNYQSLHTTVMGFDG----QLIEIQIRT 324
Query: 412 EEMDMLAVNGTASHAFYK 429
EM LA G A+H YK
Sbjct: 325 REMHNLAEYGIAAHWVYK 342
>gi|114331587|ref|YP_747809.1| (p)ppGpp synthetase I SpoT/RelA [Nitrosomonas eutropha C91]
gi|114308601|gb|ABI59844.1| (p)ppGpp synthetase I, SpoT/RelA [Nitrosomonas eutropha C91]
Length = 722
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 162/321 (50%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ ++VA +L +L +D ++A LL VVE G+ + + R G A L+ ++
Sbjct: 61 ISHPVAVARILGELHLDTTTLAAALLHDVVEDTGILKEAISKRFGSSVAELVDGVSKLDR 120
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+K Q D RK L DIR +++ LA RL MR L+ +P+ +QL I+ E
Sbjct: 121 ---IKFQTQADMQVENFRKMLLAMAQDIRVILIKLADRLHNMRTLEVMPQEKQLRIARET 177
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+AH + + EL++L F + +P Y + +++ + ++ ++L+
Sbjct: 178 LEIYAPIAHRLGLENIYQELQELGFCFSYPTRYKVLLKAIKAARGNRREVVG----KILE 233
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
K A L D V GR K YS KK+ +V D+ G RV++K S
Sbjct: 234 ATKQRLQEAGL--DAMVTGREKHLYSIYKKMAGKHLRFSDVLDIYGFRVVVKDVS----- 286
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
+CY + SL+K +P + KDYIA PK NGY+SLH + G +EIQ
Sbjct: 287 ------SCYVALGALHSLYKPIPGKFKDYIAIPKPNGYQSLHSTL----LGPYGLPIEIQ 336
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT+EM +A G ASH YK
Sbjct: 337 IRTQEMHHIAEAGVASHWLYK 357
>gi|408421441|ref|YP_006762855.1| GTP pyrophosphokinase RelA [Desulfobacula toluolica Tol2]
gi|405108654|emb|CCK82151.1| RelA: GTP pyrophosphokinase [Desulfobacula toluolica Tol2]
Length = 717
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 163/324 (50%), Gaps = 26/324 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L+ L VA +LAD+++D E I+A LL V+E + + + D G G AH++ ++
Sbjct: 46 LSHPLEVANILADMRLDVESIAAALLHDVIEDTPATREDIEDMFGPGVAHIVSGVTKLS- 104
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPR-YQQLMISLE 227
L + A +LRK L DIR +++ LA R+ MR L Y + +Q I+ E
Sbjct: 105 --ALPFSTKIAQQAESLRKMILAMADDIRVVLIKLADRIHNMRTLKYHRKPEKQAAIAQE 162
Query: 228 VMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLL 287
+ I+AP+A + ++ +ELED++F Y Y + + + I E+L
Sbjct: 163 TLDIYAPIAARLGIFWMKYELEDIAFYYTKRHEYERIKALVNKARHEKEDYIITVNEKLH 222
Query: 288 QCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVN 347
+ +K ++ + ++GRYK YS +K++ EV DV+ R+I+
Sbjct: 223 EKMK------EMNLEAEIKGRYKQNYSIYQKMISQNLDFNEVYDVIAFRIILDTVPQ--- 273
Query: 348 TSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEI 407
CY I S+WK + ++ KDYI PK N Y+S+H V V G+ +EI
Sbjct: 274 --------CYAAMGAIHSMWKPIYYKIKDYIGNPKPNMYQSIHTTV-VGPKGER---VEI 321
Query: 408 QIRTEEMDMLAVNGTASHAFYKGG 431
QIRT++MD +A +G A+H YK G
Sbjct: 322 QIRTQDMDNIAESGIAAHWSYKEG 345
>gi|420161155|ref|ZP_14667926.1| GTP diphosphokinase [Weissella koreensis KCTC 3621]
gi|394745905|gb|EJF34723.1| GTP diphosphokinase [Weissella koreensis KCTC 3621]
Length = 744
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/321 (35%), Positives = 169/321 (52%), Gaps = 28/321 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL MD + + AG L VVE ++ + +R G A ++ ++ +
Sbjct: 55 IQVAGILADLYMDPDTVIAGYLHDVVEDTPAELEDIVERFGEDVAAIVDGVSKISK---I 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + + A RK L +DIR + + LA RL +R LD L +Q I+ E ++I+
Sbjct: 112 EYKSDSERLAENHRKLLLAMSHDIRVIFVKLADRLHNIRTLDALNPAKQKRIAGETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFV--DTWLRSHETGSKPLIDIYKEQLLQCL 290
APLA + + +ELED S RYL +Y + D LR +E ++I + +
Sbjct: 172 APLADRLGIMTIKWELEDTSLRYLDYEAYHAIAQDMQLRRNER-----LEIVATAVDEIK 226
Query: 291 KTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSE 350
T L +++VSV GR K YS +K+ K + EE+ D+L +RVI+ +
Sbjct: 227 VTIDNLK--LKNVSVYGRPKHIYSIYRKMQKKQKAFEEIYDLLAIRVIV---------NS 275
Query: 351 VGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIR 410
+G+ CY I S W MP R KDYIA PKANGY+SLH +V + G RPL EIQIR
Sbjct: 276 IGD--CYAVLGAIHSHWTPMPGRFKDYIALPKANGYQSLHTSV-IGPEG--RPL-EIQIR 329
Query: 411 TEEMDMLAVNGTASHAFYKGG 431
T +M +A G A+H YK G
Sbjct: 330 THDMHEVAEFGVAAHWAYKEG 350
>gi|302335523|ref|YP_003800730.1| (p)ppGpp synthetase I SpoT/RelA [Olsenella uli DSM 7084]
gi|301319363|gb|ADK67850.1| (p)ppGpp synthetase I, SpoT/RelA [Olsenella uli DSM 7084]
Length = 781
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 169/327 (51%), Gaps = 35/327 (10%)
Query: 110 LTKALSVALLLA-DLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVK 168
+ + VAL+LA DL+MD + I A LL VE ++ + +R G A L+ ++
Sbjct: 64 INHPVEVALILAKDLKMDEDPICAALLHDTVEDTSATLDDLTERFGATVAELVDGVTKL- 122
Query: 169 NNVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLE 227
++++ +D++ A LRK F DIR +I+ LA RL MR L LP +++ + E
Sbjct: 123 --TSIEVSSMDEKQALNLRKMFLAMSKDIRVVIIKLADRLHNMRTLAALPPDRRVFKARE 180
Query: 228 VMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLL 287
M ++APLA + + + +ELEDL+F YL P Y + ++ + D
Sbjct: 181 TMDVYAPLADRLGISSIKWELEDLAFFYLNPDEYERIARMVQESRAQREQNTD------- 233
Query: 288 QCLKTDATLADLVEDVS-----VQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPS 342
+ +K TL D + V + GR K +S +K+ + G+ ++ D++ +RV+
Sbjct: 234 EAIK---TLGDELARVGITGFQIHGRPKHLWSIYQKMTRKGKKFTDIYDLIAIRVL---- 286
Query: 343 SNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTR 402
T VG+ CY+T + ++W +P R KDYIA PK NGY+SLH V D R
Sbjct: 287 -----TESVGD--CYSTLGAVHTVWHPLPGRFKDYIAMPKPNGYQSLHTTVIGFD---AR 336
Query: 403 PLMEIQIRTEEMDMLAVNGTASHAFYK 429
P+ EIQIRT EM A G A+H YK
Sbjct: 337 PI-EIQIRTFEMHSQAEYGIAAHWLYK 362
>gi|375100160|ref|ZP_09746423.1| (p)ppGpp synthetase, RelA/SpoT family [Saccharomonospora cyanea
NA-134]
gi|374660892|gb|EHR60770.1| (p)ppGpp synthetase, RelA/SpoT family [Saccharomonospora cyanea
NA-134]
Length = 781
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/321 (33%), Positives = 167/321 (52%), Gaps = 27/321 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LA+L MD + A LL VE G S++Q+ D G A L+ ++
Sbjct: 102 ITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYSVEQLTDEFGEKVAQLVDGVTKLD- 160
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
K+++ A +RK + D R L++ LA RL MR + +LP +Q + E
Sbjct: 161 ----KVKLGTAAEAETIRKMVIAMARDPRVLVIKLADRLHNMRTMRFLPPEKQARKAKET 216
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+++ APLAH + + +ELEDL+F L P Y D +R P D Y ++
Sbjct: 217 LEVLAPLAHRLGMATVKWELEDLAFAILQPKKY---DEIVRL-VADRAPSRDTYLRWVIG 272
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L L + V+GR K YS +K++ GR ++++D++G+R+++
Sbjct: 273 ELTRQ--LEESRISAKVEGRPKHYYSIHQKMIVRGRDLDDIHDLVGVRILV--------- 321
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
EV R CY ++ +LW+ MP R KDY+A+P+ Y+SLH V + +GK PL E+Q
Sbjct: 322 DEV--RDCYAAMGVVHALWQPMPGRFKDYVAQPRYGVYQSLHTTV-IGPDGK--PL-EVQ 375
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM A G A+H YK
Sbjct: 376 IRTHEMHRTAEYGIAAHWRYK 396
>gi|374337215|ref|YP_005093915.1| GTP pyrophosphokinase [Streptococcus macedonicus ACA-DC 198]
gi|372283315|emb|CCF01484.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Streptococcus
macedonicus ACA-DC 198]
Length = 739
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 165/320 (51%), Gaps = 26/320 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL +D ++ G L VVE V++ + G ++ ++ +
Sbjct: 55 IQVAGILADLHLDVVTVACGFLHDVVEDTEVTLDDIEAEFGKDVRDIVDGVTKLGK---V 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E M+I+
Sbjct: 112 EYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELEDLSFRYL + + + + L+D ++++ +K
Sbjct: 172 APLAHRLGISRIKWELEDLSFRYLNEIEFYKISHMMNEKRREREALVD----EIVKKIKD 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
L + V GR K YS +K+ + +++ D++ +R I++ S++
Sbjct: 228 YTQEQGLYGE--VYGRPKHIYSIYRKMRDKKKRFDQIYDLIAIRCIMETPSDV------- 278
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQIRT+
Sbjct: 279 ----YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQIRTK 329
Query: 413 EMDMLAVNGTASHAFYKGGL 432
EM +A G A+H YK G+
Sbjct: 330 EMHQVAEYGVAAHWAYKQGI 349
>gi|149927813|ref|ZP_01916064.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Limnobacter sp. MED105]
gi|149823435|gb|EDM82666.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Limnobacter sp. MED105]
Length = 742
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 166/322 (51%), Gaps = 25/322 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++VA L A ++D++ I A LL V+E G + + + +R G A L+ ++
Sbjct: 60 VTHPIAVAELCASWRLDSQAIQAALLHDVMEDSGTTKEDLIERFGGSVADLVDGLSKLDK 119
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ ++ A RK L D+R +++ LA RL MR LD + ++ I+LE
Sbjct: 120 ---MEFSSREEAQAENFRKMLLAMARDLRVILVKLADRLHNMRTLDIMSPAKKRRIALET 176
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+AH + N + EL++LSF++ +P Y + + + + ++ E + +
Sbjct: 177 LEIYAPIAHRLGLNEIFRELQELSFQHAYPMRYEVLKKAVLAARGNRREVVGKILEAVEK 236
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL +DA + + V GR K+ Y +K+++ +V DV G RV++K
Sbjct: 237 CL-SDANI-----ECQVYGREKALYGIYRKMIEKRLSFSQVLDVYGFRVVVKDMP----- 285
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY ++ L+K +P + KDYIA PK NGY+SLH + G +E Q
Sbjct: 286 ------GCYMAMGMLHQLFKPVPGKFKDYIAIPKLNGYQSLHTTL----LGPYGTPVEFQ 335
Query: 409 IRTEEMDMLAVNGTASHAFYKG 430
IRTEEM +A G ASH YKG
Sbjct: 336 IRTEEMHQVAEKGVASHWLYKG 357
>gi|94309803|ref|YP_583013.1| bifunctional (p)ppGpp synthetase II/guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Cupriavidus
metallidurans CH34]
gi|93353655|gb|ABF07744.1| bifunctional (p)ppGpp synthetase II and guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Cupriavidus
metallidurans CH34]
Length = 874
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 169/321 (52%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++VA L AD ++D + I A LL V+E G++ ++ ++ G + L+ ++
Sbjct: 198 ITHPVAVAELCADWKLDVQSIMAALLHDVMEDQGITKSELAEKFGPKVSELVDGLTKLDK 257
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+ Q + A + RK L D+R +++ LA R MR LD++P ++ I+LE
Sbjct: 258 ---LEFQSREQAQAESFRKMLLAMARDVRVILVKLADRTHNMRTLDFVPPEKRRRIALET 314
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+AP+AH + N + EL++LSF+ PF Y ++ +++ + ++ +++L+
Sbjct: 315 MEIYAPIAHRLGLNTIYRELQELSFKVGSPFRYATLEKAVKAARGNRREVV----KRILE 370
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
++ A +V ++S GR K+ YS +K+ +V DV G RV+++ +
Sbjct: 371 AAQSALAGAGIVAELS--GREKTLYSIYRKMHDKQLSFSQVLDVYGFRVVVETQMH---- 424
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + L+K MP + KDYIA PK NGY+SLH + V G +E Q
Sbjct: 425 -------CYMAMGALHGLYKPMPGKFKDYIAIPKINGYQSLHTTL-VGPFGTP---VEFQ 473
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT M +A G A+H YK
Sbjct: 474 IRTRGMHQIAEAGVAAHWMYK 494
>gi|392988581|ref|YP_006487174.1| GTP pyrophosphokinase [Enterococcus hirae ATCC 9790]
gi|392336001|gb|AFM70283.1| GTP pyrophosphokinase [Enterococcus hirae ATCC 9790]
Length = 737
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/321 (32%), Positives = 161/321 (50%), Gaps = 29/321 (9%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL+MD ++ G L VVE V++ +++ G A L+ ++ +
Sbjct: 55 IQVAGILADLRMDPHTVATGFLHDVVEDTDVTLDDLKEEFGPDVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK L D+R +++ LA RL MR L +L +Q I+ E ++I+
Sbjct: 112 KYKSHEEQLAENHRKMLLAMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + +++ +E+ +
Sbjct: 172 APLAHRLGISRIKWELEDTALRYLNPKQYYRIVHLMQTKREE--------REKYVNATVE 223
Query: 293 DATLADLVEDV--SVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSE 350
D LA D+ + GR K YS +K+ + E+ D+L +RVI+ +
Sbjct: 224 DIRLATEELDIYAEIYGRPKHIYSIYRKMKDQKKQFNEIYDLLAIRVIVDSIKD------ 277
Query: 351 VGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIR 410
CY I + WK MP R KDYIA PKAN Y+SLH V G +EIQIR
Sbjct: 278 -----CYAVLGAIHTKWKPMPGRFKDYIAMPKANMYQSLHTTV----IGPAGNPVEIQIR 328
Query: 411 TEEMDMLAVNGTASHAFYKGG 431
T+EM +A G A+H YK G
Sbjct: 329 TQEMHEIAEFGVAAHWAYKEG 349
>gi|392412123|ref|YP_006448730.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfomonile tiedjei DSM
6799]
gi|390625259|gb|AFM26466.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfomonile tiedjei DSM
6799]
Length = 737
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 175/337 (51%), Gaps = 36/337 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L ++V+++LA +++D ++ GLL VE +++++ G A L+ ++
Sbjct: 68 LVHPVAVSMILAQMKLDEASVATGLLHDTVEDTLATLEEIERFFGKEIAALVDGVTKISK 127
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ Q ++ A RK L DIR L++ LA RL MR L +P Q+ I+ E
Sbjct: 128 ---IEFQSKEERQAENFRKMILAMSRDIRVLMVKLADRLHNMRTLGPMPPDAQVRIARET 184
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFV----DTWLRSHETGSKPLIDIYKE 284
+ I+APLA + ++ ELEDL+FRY+ P Y + + L+ E + ++ I E
Sbjct: 185 LDIYAPLAARLGIYWMRTELEDLAFRYVNPERYSTIARRLEESLKQREEYANNVLRIITE 244
Query: 285 QLLQC-LKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSS 343
++ Q +K +++GR K +S +K++ ++++D+ R+I
Sbjct: 245 KIEQYNIKG-----------TIKGRNKEIFSIHQKMITQHLDFDQIHDLTAFRII----- 288
Query: 344 NLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRP 403
L N SE CY +I SLW+ +P R KDYIA PK+NGY+SLH V G
Sbjct: 289 -LNNVSE-----CYAVLGLIHSLWRPVPGRFKDYIAMPKSNGYQSLHTTV----IGPEGL 338
Query: 404 LMEIQIRTEEMDMLAVNGTASHAFYKGG-LTNPEEAK 439
+EIQIR+ EMD++A G A+H YK G + E+AK
Sbjct: 339 RIEIQIRSTEMDLIAEEGIAAHWSYKEGRIPEAEDAK 375
>gi|313893200|ref|ZP_07826777.1| GTP diphosphokinase [Veillonella sp. oral taxon 158 str. F0412]
gi|313442553|gb|EFR60968.1| GTP diphosphokinase [Veillonella sp. oral taxon 158 str. F0412]
Length = 742
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 161/325 (49%), Gaps = 25/325 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VA +LA LQ+D + A L+ VVE + + + G A L+ ++
Sbjct: 69 LAVADILAHLQIDHITLMAALMHDVVEDTSYTKEDLEKMFGSEVAFLVDGVTKLNQ---F 125
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ + +D RK L D+R +++ L RL MR L ++ +Q I+ E ++I
Sbjct: 126 QYETKEDRQMENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKHMRSDKQKRIAKETLEIF 185
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + +ELEDLSFRYL P Y + ++ + +++ QL + L
Sbjct: 186 APLAHRLGIFNVKWELEDLSFRYLEPEKYYDLVDQMKQKRQVREDIVNDTMSQLTKALGE 245
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
AD ++GR K YS KK+ KD R ++ D+L +RVI+ +
Sbjct: 246 ANIKAD------IKGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDTIPD-------- 291
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I SLWK +P+R KDYI+ PK+N Y+SLH V G +EIQIRT
Sbjct: 292 ---CYAVLGIAHSLWKPLPYRFKDYISMPKSNMYQSLHTTV----IGTMGQPVEIQIRTW 344
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEE 437
EM ++ G A+H YK G N ++
Sbjct: 345 EMHRVSEYGVAAHWRYKEGNKNGDK 369
>gi|238063876|ref|ZP_04608585.1| relA/spoT family protein [Micromonospora sp. ATCC 39149]
gi|237885687|gb|EEP74515.1| relA/spoT family protein [Micromonospora sp. ATCC 39149]
Length = 828
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/321 (34%), Positives = 165/321 (51%), Gaps = 27/321 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LA+L MD + A LL +E ++ Q+R G G LL + + +
Sbjct: 147 ITHPLAVATILANLGMDTTTLVAALLHDTIEDTEYTLDQMRADFG-GEVTLLVDGVTKLD 205
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
V L D A +RK + D R L++ LA RL MR L +LP ++ + E
Sbjct: 206 KVKLG----DAAKAETIRKMVVAMAKDPRVLVIKLADRLHNMRTLSFLPAPKREQKAKET 261
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I APLAH + N + +ELEDL+F LFP Y + + H+ + L+ Q+ Q
Sbjct: 262 LEILAPLAHRLGMNTIKWELEDLAFGTLFPKRYEEILRLIGEHQPQRESLL----RQVTQ 317
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ TD A + + + GR K YS +K++ GR ++ D++G+R+ LV+T
Sbjct: 318 KVGTDLKAAKIKAETT--GRPKHLYSIYQKMIVRGRDFNDIYDLVGVRI-------LVDT 368
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY +I + W+ +P R KDYIA PK N Y+SLH V + GK +E+Q
Sbjct: 369 V----RDCYAALGVIHANWQPVPGRFKDYIAMPKFNMYQSLHTTV-IGPTGKP---VEMQ 420
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT M A G A+H YK
Sbjct: 421 IRTYAMHRTAEFGIAAHWKYK 441
>gi|161507422|ref|YP_001577376.1| ppGpp synthetase [Lactobacillus helveticus DPC 4571]
gi|160348411|gb|ABX27085.1| ppGpp synthetase [Lactobacillus helveticus DPC 4571]
Length = 746
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/330 (33%), Positives = 166/330 (50%), Gaps = 36/330 (10%)
Query: 116 VALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKL 175
VA LA L +D + I AG L VE V+ +++++ G G A ++ ++ +
Sbjct: 57 VAGTLATLGLDPDTIVAGFLHDTVEDTPVTNDELKEKFGEGVAFIVDGVTKLNK---YEY 113
Query: 176 QVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAP 234
+ + A RK + D+R +++ LA RL M L +L +Q I+ E M I+AP
Sbjct: 114 KSHQEFLAENHRKMLIAMAKDLRVIMVKLADRLHNMHTLQHLRPDKQRWIASETMDIYAP 173
Query: 235 LAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQ----LLQCL 290
LA + + +ELED+SF YL P +Y + L+D+ + Q + +
Sbjct: 174 LADRLGIGTIKWELEDMSFHYLNPEAYYRIVN-----------LMDVKRSQREKYIADTI 222
Query: 291 KT-DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTS 349
KT TL +L + GR K YS KK++ + +E+ D+L +RVI+K
Sbjct: 223 KTLKKTLDELGIKYEIYGRPKHIYSIYKKMVNKHKDFDEIYDLLAVRVIVKNV------- 275
Query: 350 EVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQI 409
R CY + + WK MP R KDYIA PK NGY+SLH + + G RPL EIQI
Sbjct: 276 ----RDCYAVLGAVHTEWKPMPGRFKDYIAMPKVNGYQSLHTTI-IGPGG--RPL-EIQI 327
Query: 410 RTEEMDMLAVNGTASHAFYK-GGLTNPEEA 438
RTE+M +A G A+H YK G T +E+
Sbjct: 328 RTEQMHEVAEYGVAAHWAYKRGNFTGVQES 357
>gi|381336834|ref|YP_005174609.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Leuconostoc mesenteroides subsp. mesenteroides J18]
gi|356644800|gb|AET30643.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Leuconostoc mesenteroides subsp. mesenteroides J18]
Length = 745
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/327 (33%), Positives = 165/327 (50%), Gaps = 26/327 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD + +G L VVE ++Q VRD G A ++ ++ +
Sbjct: 55 IQVAGILAELKMDTATVISGYLHDVVEDTTATLQDVRDNFGETIAQIIDGVTKISK---I 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ Q ++ A RK L DIR +I+ LA RL MR L L +Q I+ E ++I+
Sbjct: 112 QYQSSQEQLAENHRKLLLAMSKDIRVIIVKLADRLHNMRTLGALREVKQKRIAKETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + + +ELEDLS Y+ P Y + + + + EQ+
Sbjct: 172 APLADRLGISTIKWELEDLSLSYIDPEQYYHIASLMNMKREERISYVQEAVEQI------ 225
Query: 293 DATLADL-VEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEV 351
+ + DL + V V GR K YS +K++ + EE+ D+L +RV+ + ++ +T
Sbjct: 226 NGAIKDLELSHVDVYGRPKHIYSIYRKMVDKHKAFEEIYDLLAVRVL---TDSIPDT--- 279
Query: 352 GERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRT 411
Y I S W +P R KDYIA PKANGY+SLH V D RPL E+QIRT
Sbjct: 280 -----YAVLGAIHSKWTPIPGRFKDYIALPKANGYQSLHTTVIGPDG---RPL-EVQIRT 330
Query: 412 EEMDMLAVNGTASHAFYKGGLTNPEEA 438
M +A G A+H YK + +EA
Sbjct: 331 HHMHEVAEYGVAAHWAYKKNRGSNKEA 357
>gi|313891996|ref|ZP_07825597.1| GTP diphosphokinase [Dialister microaerophilus UPII 345-E]
gi|313119639|gb|EFR42830.1| GTP diphosphokinase [Dialister microaerophilus UPII 345-E]
Length = 783
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 163/322 (50%), Gaps = 25/322 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
LSVA +L++L++D I A LL V E +++ + ++ G A L+ ++
Sbjct: 109 LSVAYILSELELDRNAIVAALLHDVAEDTDTTLEDIENQFGKEIAFLVDGVTKLSQ---F 165
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +D+ +K F D+R +I+ LA RL MR L + ++ ++ E ++I+
Sbjct: 166 KYKNKEDQQLENFQKMFLAMAEDVRVVIIKLADRLHNMRTLWVFRKEKRQRVAKETIEIY 225
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + +ELEDL F YL+P Y + + +R + ++ E + LK
Sbjct: 226 APLAHRLGIYNIKWELEDLCFHYLYPEDYYDLVSQMREKRQVREAIV----EDTMHVLKE 281
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
++ + GR K YS KK+ +D R ++ D+ +RVI+
Sbjct: 282 KIDETNI--KAVITGRPKHFYSIYKKMKRDNRELSQIYDLYAVRVIVDTIPQ-------- 331
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I+ SLWK +P R KDYIA PK N Y+SLH + + K +P+ EIQIRT
Sbjct: 332 ---CYAVLGIVHSLWKPLPKRFKDYIAVPKPNMYQSLHTTIIGT---KGQPV-EIQIRTW 384
Query: 413 EMDMLAVNGTASHAFYKGGLTN 434
EM ++ G A+H YK G +N
Sbjct: 385 EMHHVSEYGIAAHWRYKEGNSN 406
>gi|283769650|ref|ZP_06342546.1| putative GTP diphosphokinase [Bulleidia extructa W1219]
gi|283103918|gb|EFC05304.1| putative GTP diphosphokinase [Bulleidia extructa W1219]
Length = 732
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 162/318 (50%), Gaps = 23/318 (7%)
Query: 115 SVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLK 174
+VA +LA L++D + ISAG L V+E G+ + + G A L+ ES+ + K
Sbjct: 58 NVAYILATLRVDPQTISAGFLHDVIEDCGILKETLAKDFGEEVASLV-ESVTKIGTLEYK 116
Query: 175 LQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHA 233
+ + AA RK F DIR +++ L RL MR L + P Q I+ E + ++
Sbjct: 117 GKDDPEYQAANHRKIFIAMARDIRVILIKLCDRLHNMRTLQFQPEASQKRIASETLDVYT 176
Query: 234 PLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTD 293
P+AH + + + ELEDLSF YL Y + + + +T +++ + + L+ +
Sbjct: 177 PIAHRLGISTIKNELEDLSFYYLNREEYYRIAHLVEAKKTERDHNVNVMIQDISTVLREN 236
Query: 294 ATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGE 353
+ + GR K YS +K+ K + +E+ D+L +R++ K N
Sbjct: 237 HL------EFRIFGRSKHLYSIYRKMKKKNKRFDEILDLLAIRIVTKTELN--------- 281
Query: 354 RACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEE 413
CY I + +K +P R KDYIA PK N Y+SLH + + D+GK + E+QIRTEE
Sbjct: 282 --CYEILGYIHATYKPIPGRLKDYIAVPKPNMYQSLHTTI-IGDSGK---IFEVQIRTEE 335
Query: 414 MDMLAVNGTASHAFYKGG 431
MD +A G A+H YK G
Sbjct: 336 MDAIAERGIAAHWRYKEG 353
>gi|126695549|ref|YP_001090435.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9301]
gi|126542592|gb|ABO16834.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9301]
Length = 769
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 177/364 (48%), Gaps = 34/364 (9%)
Query: 73 ERMNVLSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMDAEVISA 132
E+ N + + L+ KA KL+ + ++VA LL ++ + VI+A
Sbjct: 50 EKSNKENDENQNLIVKAFKLAYKAHDG-QFRASGEPYIIHPVAVANLLKEIGASSSVIAA 108
Query: 133 GLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRK-FCL 191
GLL VVE G+ + ++ G+ L+ ++ + + A LRK F
Sbjct: 109 GLLHDVVEDTGIDLSEIETNFGLEVKILVEGVTKLGG---IHFNNRTEAQAENLRKMFLA 165
Query: 192 TYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDL 251
DIR +++ LA RL MR +++L ++L I+ E +I+APLA+ + N +ELEDL
Sbjct: 166 MASDIRVVLVKLADRLHNMRTIEWLNDEKKLRIARETREIYAPLANRLGINRFKWELEDL 225
Query: 252 SFRYLFPFSYLFVDTWL---RS-HETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQG 307
+F++L P YL + + RS E K +++ KE L+ +++ + G
Sbjct: 226 AFKFLEPKEYLDLKDQIAVKRSDREKRLKVTLNLMKENLISA---------GLKNFEITG 276
Query: 308 RYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLW 367
R K Y K+ + + E+ DV LR+I+ S +CY ++ +
Sbjct: 277 RPKHLYGIWSKMERQQKHFHEIYDVAALRIIVDNSD-----------SCYRALAVVHDTF 325
Query: 368 KEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAF 427
K +P R KDYI PK NGY+SLH +V G+ RP+ E+QIRT M +A G A+H
Sbjct: 326 KPIPGRFKDYIGLPKPNGYQSLHTSVI----GRHRPI-EVQIRTTSMHQIAEYGIAAHWQ 380
Query: 428 YKGG 431
YK G
Sbjct: 381 YKEG 384
>gi|418294259|ref|ZP_12906155.1| GTP pyrophosphokinase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
gi|379065638|gb|EHY78381.1| GTP pyrophosphokinase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
Length = 747
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 164/328 (50%), Gaps = 27/328 (8%)
Query: 113 ALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLR---VKN 169
L +A +LADL++D + + A ++ + V G + + V R G A L+ LR +
Sbjct: 68 GLEIAEILADLKLDQDSLVAAVIYRGVREGKIQLPDVHQRFGSVVAKLIEGVLRMAAISA 127
Query: 170 NVNLKLQVLDDETAAA--LRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISL 226
++N + ++ A LRK + D +R ++ LA R +R + ++ ++
Sbjct: 128 SLNPRESLVLGSQAQVENLRKMLVAMVDDVRVALIKLAERTCAIRAVKLTDDEKRQRVAR 187
Query: 227 EVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQL 286
EV I+APLAH + ++ +ELEDLSFRYL P Y + L + Y + +
Sbjct: 188 EVFDIYAPLAHRLGIGHIKWELEDLSFRYLEPEQYKQIAQLLHERRLDREQ----YIQNV 243
Query: 287 LQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLV 346
+Q LK + T + D+ GR K YS +K+ K G ++ DV +RV++
Sbjct: 244 VQQLKDELTATGIQPDID--GRAKHIYSIWRKMQKKGLQFSQIYDVRAVRVLV------- 294
Query: 347 NTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLME 406
EV R CYT I+ +LW+ +P DYIA PK NGYRSLH AV + GK ++E
Sbjct: 295 --PEV--RDCYTALGIVHTLWRHIPKEFDDYIANPKENGYRSLHTAV-IGPEGK---VLE 346
Query: 407 IQIRTEEMDMLAVNGTASHAFYKGGLTN 434
+QIRT M A G +H YKG N
Sbjct: 347 VQIRTHAMHEEAELGVCAHWRYKGTDVN 374
>gi|158522068|ref|YP_001529938.1| (p)ppGpp synthetase I SpoT/RelA [Desulfococcus oleovorans Hxd3]
gi|158510894|gb|ABW67861.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfococcus oleovorans Hxd3]
Length = 716
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/323 (30%), Positives = 164/323 (50%), Gaps = 25/323 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L+ L VA +LA +++D+ ++AGLL V+E + + +++ G H++ ++
Sbjct: 46 LSHPLEVAGILASMRLDSVCVAAGLLHDVLEDTHATEKDIQEMFGDEVLHIVQGLTKIST 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L D A ++RK L D +R +++ L RL MR L Y +Q I+ E
Sbjct: 106 ---LPYSSDQDRQAESIRKMILAMADDLRVILIKLVDRLHNMRTLKYHKDAKQKKIARET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+AP+A + ++ ELED++FR L+P F+ + +R+ + + I+ ++ + +
Sbjct: 163 LDIYAPIALRLGIYWIKNELEDMAFRVLYPEENAFLASRIRTDDVEREKYIETVRDYIKE 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L + ++V GR+K YS +K+ K EV D++ R+I+
Sbjct: 223 KLAENGLQGEVV------GRHKHFYSIFQKMKKQNLDLNEVYDIIAFRIILDTMPQ---- 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY II S+WK + + KDYIA PK N Y+SLH V G +EIQ
Sbjct: 273 -------CYEALGIIHSMWKPLAKKFKDYIAVPKPNLYQSLHTTV----FGPFGERVEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IRT+EMD +A +G A+H YK G
Sbjct: 322 IRTKEMDRVAKSGVAAHWGYKEG 344
>gi|417989775|ref|ZP_12630276.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
A2-362]
gi|417993039|ref|ZP_12633390.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
CRF28]
gi|417996397|ref|ZP_12636677.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
M36]
gi|418015214|ref|ZP_12654791.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
Lpc-37]
gi|410532448|gb|EKQ07156.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
CRF28]
gi|410535519|gb|EKQ10140.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
M36]
gi|410537520|gb|EKQ12094.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
A2-362]
gi|410552038|gb|EKQ26077.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
Lpc-37]
Length = 742
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/325 (33%), Positives = 166/325 (51%), Gaps = 25/325 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD +++G L VVE +++ + + G A ++ ++ +
Sbjct: 55 IQVAGILAELKMDPATVASGYLHDVVEDTNITLGDIEEVFGHDVAVIVDGVTKLSKVTYV 114
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ DE A RK L D+R +++ LA RL MR L +L +Q I+ E ++I+
Sbjct: 115 AHK---DELAENHRKMLLAMAKDLRVIMVKLADRLHNMRTLQHLRPDKQRRIANETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLA + + + +ELEDLS RYL P Y + + S T + I +++
Sbjct: 172 APLADRLGISTIKWELEDLSLRYLNPQQYYRIAHLMNSKRTEREAYIQEAIDEI------ 225
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ L DL + GR K YS KK+ + +E+ D+L +RVI + +
Sbjct: 226 EKALTDLHIKYEIYGRPKHIYSIYKKMRDKHKQFDELYDLLAIRVITETIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKAN Y+S+H V + GK PL E+QIRTE
Sbjct: 278 ---CYAVLGAIHTKWKPMPGRFKDYIAMPKANLYQSIHTTV-IGPMGK--PL-EVQIRTE 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEE 437
EM +A G A+H YK G T+ E
Sbjct: 331 EMHHVAEYGVAAHWAYKEGQTSKVE 355
>gi|433776113|ref|YP_007306580.1| (p)ppGpp synthetase, RelA/SpoT family [Mesorhizobium australicum
WSM2073]
gi|433668128|gb|AGB47204.1| (p)ppGpp synthetase, RelA/SpoT family [Mesorhizobium australicum
WSM2073]
Length = 742
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 160/329 (48%), Gaps = 29/329 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ L VA +L ++ MD I+ LL +E + ++ D G L+ ++K
Sbjct: 46 FSHPLEVAAILTEMHMDEATIAVALLHDTIEDTTATRAEIDDLFGPEMGKLVEGLTKLKK 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L L E A LRK L D+R L++ LA RL MR LD++P ++L I+ E
Sbjct: 106 ---LDLVSKKAEQAENLRKLLLAISEDVRVLLVKLADRLHNMRTLDHMPEAKRLRIAEET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRS-HETGSKPLIDIYKEQLL 287
M I+APLA + + ELE+++FR++ P +Y V L E L DI E+ L
Sbjct: 163 MDIYAPLAGRMGMQGMREELEEIAFRFINPEAYRAVTARLAEIFERNKGVLTDI--EKAL 220
Query: 288 QCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVN 347
L + + V+ R K +S +K+ E+++D+ G RV++ +
Sbjct: 221 SALFEKHAI-----NAGVKSRQKKPWSVFRKMEAKALSFEQLSDIFGFRVVVDSVED--- 272
Query: 348 TSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEI 407
CY I + W +P R KDYI+ PK N YRS+H + G +R +E+
Sbjct: 273 --------CYRALGAIHTTWSMVPGRFKDYISTPKQNDYRSIHTTI----VGPSRQRVEL 320
Query: 408 QIRTEEMDMLAVNGTASHAFYK--GGLTN 434
QIRT EM+ +A G A+H+ YK GG TN
Sbjct: 321 QIRTREMNKIAEYGVAAHSIYKDTGGKTN 349
>gi|113866979|ref|YP_725468.1| GTP pyrophosphokinase [Ralstonia eutropha H16]
gi|113525755|emb|CAJ92100.1| GTP pyrophosphokinase [Ralstonia eutropha H16]
Length = 759
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 168/321 (52%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++VA L AD ++D + I A LL V+E G++ ++ ++ G A L+ ++
Sbjct: 83 ITHPVAVAELCADWKLDVQSIMAALLHDVMEDQGITKSELVEKFGPKVAELVDGLTKLDK 142
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+ Q + A + RK L D+R +++ LA R MR LD++P ++ I+LE
Sbjct: 143 ---LEFQSREQAQAESFRKMLLAMARDVRVILVKLADRTHNMRTLDFVPPEKRRRIALET 199
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+AP+AH + N + EL++LSF+ PF Y ++ +++ + ++ +++L+
Sbjct: 200 MEIYAPIAHRLGLNTIYRELQELSFKVGSPFRYATLEKAVKAARGNRREVV----KRILE 255
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+ A +V ++S GR K+ YS +K+ +V DV G RV+++ +
Sbjct: 256 AAQKGLADAGIVAELS--GREKTLYSIYRKMHDKQLSFSQVLDVYGFRVVVETQMH---- 309
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + L+K MP + KDYIA PK NGY+SLH + G +E Q
Sbjct: 310 -------CYMAMGALHGLYKPMPGKFKDYIAIPKINGYQSLHTTL----VGPFGTPVEFQ 358
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT +M +A G A+H YK
Sbjct: 359 IRTRDMHQIAEAGVAAHWMYK 379
>gi|431926786|ref|YP_007239820.1| RelA/SpoT family (p)ppGpp synthetase [Pseudomonas stutzeri RCH2]
gi|431825073|gb|AGA86190.1| (p)ppGpp synthetase, RelA/SpoT family [Pseudomonas stutzeri RCH2]
Length = 747
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 164/328 (50%), Gaps = 27/328 (8%)
Query: 113 ALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLR---VKN 169
L +A +LADL++D + + A ++ + V G + + V R G A L+ LR +
Sbjct: 68 GLEIAEILADLKLDQDSLVAAVIYRGVREGKIQLADVNQRFGSVVAKLIEGVLRMAAISA 127
Query: 170 NVNLKLQVLDDETAAA--LRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISL 226
++N + ++ A LRK + D +R ++ LA R +R + ++ ++
Sbjct: 128 SLNPRESLVLGSQAQVENLRKMLVAMVDDVRVALIKLAERTCAIRAVKLADDEKRQRVAR 187
Query: 227 EVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQL 286
EV I+APLAH + ++ +ELEDLSFRYL P Y + L + Y + +
Sbjct: 188 EVFDIYAPLAHRLGIGHIKWELEDLSFRYLEPEQYKQIAQLLHERRLDREQ----YIQNV 243
Query: 287 LQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLV 346
+Q LK + T + D+ GR K YS +K+ K G ++ DV +RV++
Sbjct: 244 VQQLKDELTATGIQPDID--GRAKHIYSIWRKMQKKGLQFSQIYDVRAVRVLV------- 294
Query: 347 NTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLME 406
EV R CYT I+ +LW+ +P DYIA PK NGYRSLH AV + GK ++E
Sbjct: 295 --PEV--RDCYTALGIVHTLWRHIPKEFDDYIANPKENGYRSLHTAV-IGPEGK---VLE 346
Query: 407 IQIRTEEMDMLAVNGTASHAFYKGGLTN 434
+QIRT M A G +H YKG N
Sbjct: 347 VQIRTHAMHEEAELGVCAHWRYKGTDVN 374
>gi|431805176|ref|YP_007232079.1| (p)ppGpp synthetase I SpoT/RelA [Pseudomonas putida HB3267]
gi|430795941|gb|AGA76136.1| (p)ppGpp synthetase I SpoT/RelA [Pseudomonas putida HB3267]
Length = 702
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 159/321 (49%), Gaps = 25/321 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LAD+ MD + + A +L V+E G++ + + + G A L+ V
Sbjct: 46 VTHPLAVASILADMHMDHQSLMAAMLHDVIEDTGIAKEALSQQFGETVAELVDG---VSK 102
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+ + + A +K + DIR +++ LA RL MR L+ L ++ I+ E
Sbjct: 103 LTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+AP+A+ + + + E EDL F+ + P + ++S K ++ + L
Sbjct: 163 LEIYAPIANRLGMHTVRVEFEDLGFKAMHPMRSSLIHRAVKSARGNRKEIVAKIEHSLAN 222
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
CL D + + GR K Y KK+ R E+ DV R+++ + V+T
Sbjct: 223 CLAADGIEGE------ISGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIVV----DKVDT 272
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
CY + +L+K +P R KDYIA PKANGY+SLH + G +EIQ
Sbjct: 273 -------CYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQSLHTTL----FGMHGVPIEIQ 321
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT EM+ +A NG A+H YK
Sbjct: 322 IRTREMEEMANNGIAAHWLYK 342
>gi|86357023|ref|YP_468915.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase [Rhizobium
etli CFN 42]
gi|86281125|gb|ABC90188.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase protein
[Rhizobium etli CFN 42]
Length = 744
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 165/335 (49%), Gaps = 38/335 (11%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ L VA +L D+ +D I+ LL +E + ++ + G L+ ++K
Sbjct: 46 ISHPLEVAAILTDMHLDESTIAVALLHDTIEDTTATRAEIDELFGEDIGRLVEGLTKIKK 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L L + A LRK L D +R L++ LA RL MR LD++ ++ IS E
Sbjct: 106 ---LDLVTKKAKQAENLRKLLLAISDDVRVLLVKLADRLHNMRTLDHMSADKRARISEET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLA + + ELE+LSFR++ P +Y ET +K L ++ K
Sbjct: 163 MEIYAPLAGRMGMQDMREELEELSFRHMNPEAY----------ETVTKRLEELSKRNEGI 212
Query: 289 CLKTDATLADL-----VEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIK--P 341
K +A L DL + V+GR K YS +K+ E+++DV G R+I++ P
Sbjct: 213 VKKIEAELRDLLVASGLTSAYVKGRQKKPYSVFRKMQSKSLSFEQLSDVYGFRLIVEDIP 272
Query: 342 SSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKT 401
S CY I+ + W+ +P R KDYI+ PK N YRSLH + G +
Sbjct: 273 S-------------CYRALGIVHTRWRVVPGRFKDYISTPKQNDYRSLHTTI----VGPS 315
Query: 402 RPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNPE 436
+E+QIRT+ M +A G A+H YK G TN +
Sbjct: 316 SQRIELQIRTKRMHEIAEFGIAAHTLYKDGATNAD 350
>gi|347548906|ref|YP_004855234.1| putative (p)ppGpp synthetase [Listeria ivanovii subsp. ivanovii PAM
55]
gi|346981977|emb|CBW85962.1| Putative (p)ppGpp synthetase [Listeria ivanovii subsp. ivanovii PAM
55]
Length = 738
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 164/319 (51%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L +L+MD +++G L VVE V++ + + G A L+ ++ +
Sbjct: 55 IQVAGILVELKMDPSTVASGFLHDVVEDTPVTLADLEEVFGSEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP +Q IS E ++I
Sbjct: 112 KYKSHEEQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPVEKQRRISNETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ + Y ++ +
Sbjct: 172 APLAHRLGISRVKWELEDTALRYLNPQQYYRIVHLMKQKRDARER----YLNDVIDGVNE 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ D+S GR K YS +K+ + + E+ D+L +R+++ +
Sbjct: 228 NLDELNIQADIS--GRPKHIYSIYRKMSEQNKQFNEIYDLLAVRIVVSSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PK+N Y+S+H V + G+ PL E+QIRT
Sbjct: 278 ---CYAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTV-IGPQGE--PL-EVQIRTH 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 331 EMHQIAEYGVAAHWAYKEG 349
>gi|315222474|ref|ZP_07864372.1| GTP diphosphokinase [Streptococcus anginosus F0211]
gi|315188442|gb|EFU22159.1| GTP diphosphokinase [Streptococcus anginosus F0211]
Length = 738
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 182/367 (49%), Gaps = 35/367 (9%)
Query: 78 LSSSSSRLLFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQ 137
LSS L+ KAL ++ + + + VA +LA L++DA ++ G L
Sbjct: 20 LSSEDVTLVQKALFYAVDRHRG-QFRQSGEPYIIHPIQVAGILAKLKLDAVSVACGFLHD 78
Query: 138 VVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVN----LKLQVLDDETAAALRKFCLTY 193
VVE ++ + G HE + + V +K +++ A RK +
Sbjct: 79 VVEDTAATLDDLEGEFG-------HEVRVIVDGVTKLGKVKYMSHEEQLAENHRKMLMAM 131
Query: 194 -YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLS 252
DIR +++ LA RL MR L +L + +Q IS E M+I+APLAH + + + +ELEDL+
Sbjct: 132 SKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISSVKWELEDLA 191
Query: 253 FRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSR 312
FRYL P + + ++ + L+D +++ ++T A+ +L ++ GR K
Sbjct: 192 FRYLNPTEFYKISHLMKEKRREREELVD----EVVHKIETYASERNLHGEIY--GRPKHI 245
Query: 313 YSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPH 372
YS +K+ + +E+ D++ +R I+ S++ Y I LW+ MP
Sbjct: 246 YSIYRKMQDKKKRFDEIYDLIAIRCILDTQSDV-----------YAMLGYIHELWRPMPG 294
Query: 373 RTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYKGGL 432
R KDYIA KANGY+S+H V G P+ E QIRT+EM +A G A+H YK G+
Sbjct: 295 RFKDYIANRKANGYQSIHTTV----YGPKGPI-EFQIRTKEMHEVAEYGVAAHWAYKKGI 349
Query: 433 TNPEEAK 439
++K
Sbjct: 350 KGQVDSK 356
>gi|254785342|ref|YP_003072771.1| GTP pyrophosphokinase [Teredinibacter turnerae T7901]
gi|237686776|gb|ACR14040.1| GTP pyrophosphokinase [Teredinibacter turnerae T7901]
Length = 747
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 163/332 (49%), Gaps = 33/332 (9%)
Query: 108 SPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLR- 166
S L+ L +A +LA+LQ+D + + A +L + V ++ V ++ G L+ +
Sbjct: 65 SSLSAGLEMAEILAELQLDEDTLVAAVLYRSVRERKLAADVVEEKFGKTVVGLIQGVQKM 124
Query: 167 -----VKNNVNLKLQVLDDETAAA---LRKFCLTYYD-IRALILDLAIRLDMMRHLDYLP 217
+ N+ N V E+A +RK + D +R ++ L+ R +R + P
Sbjct: 125 AAISGLSNHSNE--HVFGQESAEQSENVRKMLVAMVDDVRVALIKLSERTCAIRAVKGAP 182
Query: 218 RYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKP 277
++ ++ EV +++APLAH + ++ +ELEDLSFRYL PF Y ++ L +
Sbjct: 183 VERRQKVAKEVSEVYAPLAHRLGIGHIKWELEDLSFRYLHPFDYKYIAKLLDERRVDRQA 242
Query: 278 LIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRV 337
ID L + L T+ A + GR K YS +K+ + EV D+ +R+
Sbjct: 243 YIDRVISILEESLATEGVEA------HIYGRAKHIYSIWRKMRRKNIGFSEVYDIRAVRI 296
Query: 338 IIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSD 397
LVN+ ER CYT I+ +LW+ +P DYIA PK NGYRSLH AV
Sbjct: 297 -------LVNS----ERECYTVLGIVHALWRNIPREFDDYIANPKENGYRSLHTAV---- 341
Query: 398 NGKTRPLMEIQIRTEEMDMLAVNGTASHAFYK 429
NG ++E+QIRT M A G +H YK
Sbjct: 342 NGPNNQVLEVQIRTRTMHDEAEYGVCAHWRYK 373
>gi|147668657|ref|YP_001213475.1| (p)ppGpp synthetase I SpoT/RelA [Dehalococcoides sp. BAV1]
gi|146269605|gb|ABQ16597.1| (p)ppGpp synthetase I, SpoT/RelA [Dehalococcoides sp. BAV1]
Length = 728
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/339 (34%), Positives = 166/339 (48%), Gaps = 55/339 (16%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHL------------- 160
L+VA+ LADLQ+DA +SA LL V E +S++Q+ + G A L
Sbjct: 49 LNVAMTLADLQLDAATLSAALLHDVPEDANISLEQIDKKFGADVAKLVDGVTKLSKLALG 108
Query: 161 --LHESLRVKNNVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLP 217
+ ++ R N +L+ A LRK + D+R + + LA R MR L L
Sbjct: 109 PAIEDARRPGGNASLR-------QAENLRKMLVAMAEDLRVVFIKLADRFHNMRTLQALS 161
Query: 218 RYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYL----FVDTWLRSHET 273
++ I+ E M+I+APLAH + L ++LEDL+FRYL P Y VD+ L +
Sbjct: 162 PEKRRSIAKETMEIYAPLAHRLGIWELKWQLEDLAFRYLDPRHYRQVANLVDSKLAQRQN 221
Query: 274 GSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLK---DGRIPEEVN 330
Y E + L+ + L +V V GR K YS +K+ K G+ E++
Sbjct: 222 --------YLEHVSAILQGEFEKNGL--NVEVSGRPKHLYSIYQKMEKYASQGKQFEDIY 271
Query: 331 DVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLH 390
DVL LRV++ + CY I+ SLW +P DYIA PK NGY+SLH
Sbjct: 272 DVLALRVLVNDIPD-----------CYHAVGIVHSLWHPIPGAFDDYIANPKPNGYQSLH 320
Query: 391 MAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYK 429
AV + T PL E+Q+RT +M +A G A+H YK
Sbjct: 321 TAV---MSLGTTPL-EVQVRTYQMHHIAEYGVAAHWRYK 355
>gi|452202850|ref|YP_007482983.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Dehalococcoides
mccartyi DCMB5]
gi|452109909|gb|AGG05641.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Dehalococcoides
mccartyi DCMB5]
Length = 728
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/339 (34%), Positives = 166/339 (48%), Gaps = 55/339 (16%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHL------------- 160
L+VA+ LADLQ+DA +SA LL V E +S++Q+ + G A L
Sbjct: 49 LNVAMTLADLQLDAATLSAALLHDVPEDANISLEQIDKKFGADVAKLVDGVTKLSKLALG 108
Query: 161 --LHESLRVKNNVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLP 217
+ ++ R N +L+ A LRK + D+R + + LA R MR L L
Sbjct: 109 PAIEDARRPGGNASLR-------QAENLRKMLVAMAEDLRVVFIKLADRFHNMRTLQALS 161
Query: 218 RYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYL----FVDTWLRSHET 273
++ I+ E M+I+APLAH + L ++LEDL+FRYL P Y VD+ L +
Sbjct: 162 PEKRRSIAKETMEIYAPLAHRLGIWELKWQLEDLAFRYLDPRHYRQVANLVDSKLAQRQN 221
Query: 274 GSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLK---DGRIPEEVN 330
Y E + L+ + L +V V GR K YS +K+ K G+ E++
Sbjct: 222 --------YLEHVSAILQGEFKKNGL--NVEVSGRPKHLYSIYQKMEKYASQGKQFEDIY 271
Query: 331 DVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLH 390
DVL LRV++ + CY I+ SLW +P DYIA PK NGY+SLH
Sbjct: 272 DVLALRVLVNDIPD-----------CYHAVGIVHSLWHPIPGAFDDYIANPKPNGYQSLH 320
Query: 391 MAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYK 429
AV + T PL E+Q+RT +M +A G A+H YK
Sbjct: 321 TAV---MSLGTTPL-EVQVRTYQMHHIAEYGVAAHWRYK 355
>gi|428174361|gb|EKX43257.1| hypothetical protein GUITHDRAFT_73270 [Guillardia theta CCMP2712]
Length = 370
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 167/332 (50%), Gaps = 29/332 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA ++AD+++D+ I GLL VE S++ ++ G A L+ ++ +
Sbjct: 29 VGVASIIADMKLDSASIVTGLLHDTVEDTSASLELIQQEFGSEVAQLVDGVTKIGK---I 85
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ +++ A RK + DIR +++ LA R +R L ++P +Q ++ E + ++
Sbjct: 86 QFTSKEEQQAENFRKMIVAMARDIRVILVKLADRTHNVRTLKFVPAQKQKEVARETLDLY 145
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + ++ ELED S RYL P Y L+ K Y ++++ L
Sbjct: 146 APLAHRLGIFWMKTELEDTSLRYLEPEVY----EELKMMVAAKKEERQAYTNEVMEIL-- 199
Query: 293 DATLADL-VEDVSVQGRYKSRYSTMKKLLKDGRIPE--EVNDVLGLRVIIKPSSNLVNTS 349
+ +L D + +V V GR K YS +K ++ R+ EV D++ R++ S
Sbjct: 200 EKSLVDQGLTNVVVTGRAKHFYSIYQK-MRSRRLKHVSEVQDLIAFRILTDDLSQ----- 253
Query: 350 EVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQI 409
CY I+ S+WK +P R KDYIA PK N YRSLH V + G+ +E+QI
Sbjct: 254 ------CYQALGIVHSMWKPVPGRFKDYIALPKPNMYRSLHTTV-IGPGGQR---IEVQI 303
Query: 410 RTEEMDMLAVNGTASHAFYKGGLTNPEEAKRL 441
RT EM +A G A+H YKG EEA+R
Sbjct: 304 RTSEMHRVAEEGIAAHWMYKGESKGVEEARRF 335
>gi|256545119|ref|ZP_05472485.1| GTP diphosphokinase [Anaerococcus vaginalis ATCC 51170]
gi|256399160|gb|EEU12771.1| GTP diphosphokinase [Anaerococcus vaginalis ATCC 51170]
Length = 725
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 164/317 (51%), Gaps = 25/317 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
++VA ++++Q+D + I AGL+ V+E V+ +Q+++ G L+ ++K L
Sbjct: 55 IAVATTISNMQLDDQTICAGLMHDVLEDTPVTEEQMKENFGEEITFLVDGVTKLKK---L 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ +++ A +RK L DIR +++ LA RL MR L+Y +Q + E ++I+
Sbjct: 112 NYKTKEEKQAENIRKMVLAMSNDIRVILIKLADRLHNMRTLEYKTEKKQKQTASETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
PLAH + + +ELEDL FRY P Y + + + + I+ Q+++ L
Sbjct: 172 VPLAHRLGIYTMKWELEDLCFRYQKPEEYYELAQMVHNKRREREAYIN----QIIETL-- 225
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
D L+ + + GR K +S KK+ ++ E+ D+ +RV++ ++
Sbjct: 226 DKALSSSNINYEISGRPKGLFSIYKKMSRNKIEFNEIYDLTAVRVLVDTVAD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY + S+W+ +P+R KDYI +PK NGYRSLH V D ++P E+QIRT
Sbjct: 278 ---CYEVLGKVHSIWRPIPNRIKDYIGQPKPNGYRSLHTTVFGED---SKPF-EVQIRTR 330
Query: 413 EMDMLAVNGTASHAFYK 429
+M G A+H YK
Sbjct: 331 QMHYECEYGIAAHWKYK 347
>gi|73747961|ref|YP_307200.1| GTP pyrophosphokinase [Dehalococcoides sp. CBDB1]
gi|289431960|ref|YP_003461833.1| (p)ppGpp synthetase I SpoT/RelA [Dehalococcoides sp. GT]
gi|452204331|ref|YP_007484460.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Dehalococcoides
mccartyi BTF08]
gi|73659677|emb|CAI82284.1| GTP pyrophosphokinase [Dehalococcoides sp. CBDB1]
gi|288945680|gb|ADC73377.1| (p)ppGpp synthetase I, SpoT/RelA [Dehalococcoides sp. GT]
gi|452111387|gb|AGG07118.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Dehalococcoides
mccartyi BTF08]
Length = 728
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/339 (34%), Positives = 166/339 (48%), Gaps = 55/339 (16%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHL------------- 160
L+VA+ LADLQ+DA +SA LL V E +S++Q+ + G A L
Sbjct: 49 LNVAMTLADLQLDAATLSAALLHDVPEDANISLEQIDKKFGADVAKLVDGVTKLSKLALG 108
Query: 161 --LHESLRVKNNVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLP 217
+ ++ R N +L+ A LRK + D+R + + LA R MR L L
Sbjct: 109 PAIEDARRPGGNASLR-------QAENLRKMLVAMAEDLRVVFIKLADRFHNMRTLQALS 161
Query: 218 RYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYL----FVDTWLRSHET 273
++ I+ E M+I+APLAH + L ++LEDL+FRYL P Y VD+ L +
Sbjct: 162 PEKRRSIAKETMEIYAPLAHRLGIWELKWQLEDLAFRYLDPRHYRQVANLVDSKLAQRQN 221
Query: 274 GSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLK---DGRIPEEVN 330
Y E + L+ + L +V V GR K YS +K+ K G+ E++
Sbjct: 222 --------YLEHVSAILQGEFEKNGL--NVEVSGRPKHLYSIYQKMEKYASQGKQFEDIY 271
Query: 331 DVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLH 390
DVL LRV++ + CY I+ SLW +P DYIA PK NGY+SLH
Sbjct: 272 DVLALRVLVNDIPD-----------CYHAVGIVHSLWHPIPGAFDDYIANPKPNGYQSLH 320
Query: 391 MAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYK 429
AV + T PL E+Q+RT +M +A G A+H YK
Sbjct: 321 TAV---MSLGTTPL-EVQVRTYQMHHIAEYGVAAHWRYK 355
>gi|359423647|ref|ZP_09214774.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia amarae NBRC 15530]
gi|358241005|dbj|GAB04356.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia amarae NBRC 15530]
Length = 792
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/326 (34%), Positives = 166/326 (50%), Gaps = 37/326 (11%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LADL MD + A LL VE G S++Q+ G AHL+ ++
Sbjct: 107 ITHPLAVATILADLGMDTTTLIAALLHDTVEDTGYSLEQLEAEFGAEVAHLVDGVTKLD- 165
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
K+ + A +RK + D R L++ +A RL MR + +LP +Q + E
Sbjct: 166 ----KVALGSAAEAETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLPPEKQARKARET 221
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSY-----LFVDTWLRSHETGSKPLIDIYK 283
+++ APLAH + + +ELEDLSF L P Y L D P D Y
Sbjct: 222 LEVIAPLAHRLGMATVKWELEDLSFAILHPKKYEEIVRLVAD---------RAPSRDTYL 272
Query: 284 EQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSS 343
++ + T+A A + V V+GR K +S +K++ GR ++++D++G+R++
Sbjct: 273 ARVRADI-TNALAATRITAV-VEGRPKHYWSIYQKMIVKGRDFDDIHDLVGVRIL----- 325
Query: 344 NLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRP 403
EV R CY ++ SLW+ M R KDYIA+P+ Y+SLH V + GK P
Sbjct: 326 ----CDEV--RDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTV-IGPEGK--P 376
Query: 404 LMEIQIRTEEMDMLAVNGTASHAFYK 429
L E+QIRT EM A G A+H YK
Sbjct: 377 L-EVQIRTHEMHRTAEFGIAAHWRYK 401
>gi|85716288|ref|ZP_01047262.1| RelA/SpoT protein [Nitrobacter sp. Nb-311A]
gi|85696960|gb|EAQ34844.1| RelA/SpoT protein [Nitrobacter sp. Nb-311A]
Length = 751
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 161/329 (48%), Gaps = 25/329 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ L VA +L L++D I A LL +E + ++ + G L+ ++K
Sbjct: 70 FSHPLEVAAILTGLKLDDATIVAALLHDTIEDTEATRAEIDNMFGPEIGALVEGLTKLKR 129
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+L + + A LRK L D +R L++ LA RL MR L+++P + I+ E
Sbjct: 130 ---LELVSREAKQAENLRKLLLAIADDVRVLLIKLADRLHNMRTLEFVPPASRQRIAEET 186
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+APLA + + ELEDL+F+ L P ++ V L + ++ LI + QL
Sbjct: 187 LDIYAPLAGRMGMQEMREELEDLAFQTLDPEAHTVVAQRLDALAERNRNLIGEIESQLAT 246
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L +A V GR K +S K+ + E+++D+ G RV++
Sbjct: 247 SLANKGIVA------RVSGRRKQPFSIWTKMERKSVGFEQLSDIFGFRVVMPDVE----- 295
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
ACY ++ W +P R KDYI+ PK N YRS+H V N + +E+Q
Sbjct: 296 ------ACYRALGVVHMTWPVVPGRFKDYISTPKQNDYRSIHTTVIGPGNQR----VELQ 345
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
+RTEEMD +A G A+HAFYK G +P E
Sbjct: 346 LRTEEMDRIAEFGIAAHAFYKDGAGSPTE 374
>gi|257055543|ref|YP_003133375.1| (p)ppGpp synthetase, RelA/SpoT family [Saccharomonospora viridis
DSM 43017]
gi|256585415|gb|ACU96548.1| (p)ppGpp synthetase, RelA/SpoT family [Saccharomonospora viridis
DSM 43017]
Length = 812
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/326 (32%), Positives = 167/326 (51%), Gaps = 37/326 (11%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LA+L MD + A LL VE G S++Q+ + G A L+ ++
Sbjct: 133 ITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYSVEQLTEDFGEKVAQLVDGVTKLD- 191
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
K+++ A +RK + D R L++ LA RL MR + +LP +Q + E
Sbjct: 192 ----KVKLGTAAEAETIRKMVIAMARDPRVLVIKLADRLHNMRTMRFLPPEKQARKAKET 247
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSY-----LFVDTWLRSHETGSKPLIDIYK 283
+++ APLAH + + + +ELEDL+F L P Y L D P D Y
Sbjct: 248 LEVLAPLAHRLGMSTVKWELEDLAFAILQPKKYDEIVRLVAD---------RAPSRDTYL 298
Query: 284 EQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSS 343
++ L L + + V+GR K YS +K++ GR ++++D++G+R++++
Sbjct: 299 RWVIGELTRQ--LEESRINAKVEGRPKHYYSIHQKMIVRGRDLDDIHDLVGVRILVEDV- 355
Query: 344 NLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRP 403
R CY ++ +LW+ MP R KDYIA+P+ Y+SLH V + +GK P
Sbjct: 356 ----------RDCYAAMGVVHALWQPMPGRFKDYIAQPRYGVYQSLHTTV-IGPDGK--P 402
Query: 404 LMEIQIRTEEMDMLAVNGTASHAFYK 429
L E+QIRT EM A G A+H YK
Sbjct: 403 L-EVQIRTHEMHRTAEYGIAAHWRYK 427
>gi|75676113|ref|YP_318534.1| RelA/SpoT protein [Nitrobacter winogradskyi Nb-255]
gi|74420983|gb|ABA05182.1| RelA/SpoT protein [Nitrobacter winogradskyi Nb-255]
Length = 774
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 161/329 (48%), Gaps = 25/329 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ L VA +L L++D I A LL +E + ++ + G L+ ++K
Sbjct: 93 FSHPLEVAAILTGLKLDDATIVAALLHDTIEDTEATRAEIDNMFGPEIGALVEGLTKLKR 152
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+L + + A LRK L D +R L++ LA RL MR L+++P + I+ E
Sbjct: 153 ---LELVSREAKQAENLRKLLLAIADDVRVLLVKLADRLHNMRTLEFVPPASRQRIAEET 209
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+APLA + + ELEDL+F+ L P ++ V L + ++ LI + QL
Sbjct: 210 LDIYAPLAGRMGMQEMREELEDLAFQTLDPEAHGVVAQRLDALAERNRNLIGEIESQLTT 269
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L A V GR K +S K+ + E+++D+ G RV++
Sbjct: 270 SLANKGIAA------RVAGRRKQPFSIWTKMERKSVGFEQLSDIFGFRVVVPDVE----- 318
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
ACY ++ W +P R KDYI+ PK N YRS+H V N + +E+Q
Sbjct: 319 ------ACYRALGVVHMTWPVVPGRFKDYISTPKQNDYRSIHTTVIGPGNQR----VELQ 368
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEE 437
+RTEEMD +A +G A+HAFYK G +P E
Sbjct: 369 LRTEEMDRIAEHGIAAHAFYKDGAGSPTE 397
>gi|404482346|ref|ZP_11017573.1| RelA/SpoT family protein [Clostridiales bacterium OBRC5-5]
gi|404344507|gb|EJZ70864.1| RelA/SpoT family protein [Clostridiales bacterium OBRC5-5]
Length = 761
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 169/322 (52%), Gaps = 34/322 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLH-----ESLRVK 168
+ VA++LA+L++D E I+AGLL V+E +S +++ + G+ A+L+ L +K
Sbjct: 76 ICVAIILAELELDKETIAAGLLHDVIEDTAISFEELSNIFGVDVANLVDGVTKLTQLSLK 135
Query: 169 NNVNLKLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLE 227
N+ +++Q A LRK F DIR +++ LA RL MR L Y+ +Q + E
Sbjct: 136 ND-KIEMQ------AENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMKPEKQKEKARE 188
Query: 228 VMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLL 287
M I++P+A + + + EL+DLS +YL P Y + L + + +D +++
Sbjct: 189 TMDIYSPIAQRLGISKIKVELDDLSLKYLHPDVYYDLSEKLAFRKEQRQQFVD----EII 244
Query: 288 QCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVN 347
+ K + L+D + GR K +S KK++ + +++ DV +R+I++ +
Sbjct: 245 K--KFNEHLSDTGMKYQISGRVKHLFSIYKKMVNQNKTLDQIYDVFAIRIIVEDVA---- 298
Query: 348 TSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEI 407
ACY ++K +P R KDYIA PK N Y+SLH + +SD G+ E+
Sbjct: 299 -------ACYLALGTAHEIYKPIPGRFKDYIAMPKPNMYQSLHTTL-ISDTGQP---FEV 347
Query: 408 QIRTEEMDMLAVNGTASHAFYK 429
QIRT EM A G A+H YK
Sbjct: 348 QIRTFEMHKTAEFGIAAHWKYK 369
>gi|326522797|dbj|BAJ88444.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 891
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/334 (33%), Positives = 174/334 (52%), Gaps = 18/334 (5%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVE-SGGVSIQQVRDRIGIGTAHLLHESLRVKNNVN 172
+ VA +L + ++D E I+AGLL VE + V+ + +++ G ++ +V
Sbjct: 188 VEVARILGEHELDWESIAAGLLHDTVEDTDMVTFEAIQNEFGATVCRIVEGETKVSKLGK 247
Query: 173 LKLQ----VLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLE 227
L+ + D A LR+ F ++R +I+ LA RL MR L ++P+++Q I++E
Sbjct: 248 LQCKNEGSSKQDVKAEDLRQMFLAMTEEVRVIIVKLADRLHNMRTLTHMPQHKQYAIAME 307
Query: 228 VMKIHAPLAHAVATNYLSFELEDLSFRYLFP--FSYL--FVDTWLRSHETGSKPLIDIYK 283
+++ APLA + + ELE LSF Y+ P F+ L V+ ++HE ++
Sbjct: 308 TLQVFAPLAKLLGMYQIKSELEYLSFMYMNPGDFAELRKRVEDIFKAHEQE----LEEAN 363
Query: 284 EQLLQCLKTDATLADLVE-DVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKP- 341
+ L Q + D L DLV + V+ K YS K LK EVN V LR+IIKP
Sbjct: 364 KTLKQKIAEDQFL-DLVSVETEVRSVCKELYSIYKTALKSKSSLNEVNQVAQLRIIIKPK 422
Query: 342 SSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKT 401
S N V ++ CY ++ +W +P KDYIA PK NGY+SLH V N ++
Sbjct: 423 SCNGVGPLCTAQQICYHVLGLVHCIWTPIPQAVKDYIATPKPNGYQSLHTTVIPFLN-ES 481
Query: 402 RPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNP 435
+E+QIRTE+MD++A G A+H G ++ P
Sbjct: 482 MFHLEVQIRTEDMDLIAERGIAAHYSGIGVVSGP 515
>gi|431381389|ref|ZP_19510991.1| RelA/SpoT family protein [Enterococcus faecium E1627]
gi|430581751|gb|ELB20189.1| RelA/SpoT family protein [Enterococcus faecium E1627]
Length = 737
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 160/319 (50%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL+MD ++ G L VVE ++++ +R+ G A L+ ++ +
Sbjct: 55 IQVAGILADLKMDPHTVATGFLHDVVEDTEITLEDLREEFGDDVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK L D+R +++ LA RL MR L +L +Q I+ E ++I+
Sbjct: 112 KYKSHEEQLAENHRKMLLAMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + +++ + + E + +
Sbjct: 172 APLAHRLGISRIKWELEDTALRYLNPKQYYRIVHLMQTKREEREKYVSGTVEDIRIATEE 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
A+ + GR K YS +K+ + E+ D+L +RVI+ +
Sbjct: 232 LGIFAE------IYGRPKHIYSIYRKMKDQKKQFNEIYDLLAIRVIVDSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKAN Y+SLH V G +EIQIRT+
Sbjct: 278 ---CYAVLGAIHTKWKPMPGRFKDYIAMPKANMYQSLHTTV----IGPAGNPVEIQIRTQ 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 331 EMHEIAEFGVAAHWAYKEG 349
>gi|300361857|ref|ZP_07058034.1| GTP diphosphokinase [Lactobacillus gasseri JV-V03]
gi|300354476|gb|EFJ70347.1| GTP diphosphokinase [Lactobacillus gasseri JV-V03]
Length = 750
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 126/403 (31%), Positives = 195/403 (48%), Gaps = 36/403 (8%)
Query: 116 VALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNLKL 175
VA LA L++D + ++AG L VE V+ ++++ G A ++ ++ + + K
Sbjct: 57 VAGTLATLRLDPDTVAAGYLHDTVEDTPVTNDDIKEKFGKDVAFIVDGVTKL-SKIQYKS 115
Query: 176 QVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAP 234
+ ++ A RK + D+R +++ LA RL M LD+L +Q I+ E + I+AP
Sbjct: 116 KSHEEYLADNHRKMLIAMAKDLRVIMVKLADRLHNMHTLDHLRPDKQRRIADETLDIYAP 175
Query: 235 LAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDA 294
LA + + +ELED+S YL P Y + ++S + + I ++ LK
Sbjct: 176 LADRLGIGTIKWELEDMSLHYLNPQQYYRIVNLMQSKRSEREGYI----ADAIKTLKQ-- 229
Query: 295 TLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGER 354
TL L + + GR K YS KK++ + E+ D+L +RVI+K R
Sbjct: 230 TLDSLGIEYEIYGRPKHIYSIYKKMVNKHKDFSEIYDLLAVRVIVKSV-----------R 278
Query: 355 ACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEM 414
CY + + WK MP R KDYIA PK NGY+SLH + + GK PL EIQIRTE M
Sbjct: 279 DCYAVLGAVHTKWKPMPGRFKDYIAVPKVNGYQSLHTTI-IGPGGK--PL-EIQIRTEAM 334
Query: 415 DMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALRLKDIPSTNH---KGFEFD- 470
+A G A+H YK G+ E + E+ L L++ +H K + D
Sbjct: 335 HQVAEYGVAAHWAYKEGVKGEVEQTDANKKLNMFQEI--LELQNETKDSHEFMKSVKTDI 392
Query: 471 WRDRVFRLLDKNGD------GRISIEELMEVMEELGAPGEDAR 507
+ DRV+ K GD G + ++ V E+GA AR
Sbjct: 393 FSDRVYVFTPK-GDVYELPKGSVPLDFAYMVHSEVGAHSVGAR 434
>gi|116618462|ref|YP_818833.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293]
gi|116097309|gb|ABJ62460.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293]
Length = 731
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/332 (33%), Positives = 170/332 (51%), Gaps = 36/332 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LA+L+MD + +G L VVE ++Q VRD G A ++ ++ +
Sbjct: 41 IQVAGILAELKMDTATVISGYLHDVVEDTTATLQDVRDNFGETIAQIIDGVTKISK---I 97
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
+ Q ++ A RK L DIR +I+ LA RL MR L L +Q I+ E ++I+
Sbjct: 98 QYQSSQEQLAENHRKLLLAMSKDIRVIIVKLADRLHNMRTLGALREEKQKRIAKETLEIY 157
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCL-- 290
APLA + + + +ELEDLS Y+ P Y + + L+++ +E+ + +
Sbjct: 158 APLADRLGISTIKWELEDLSLSYIDPEQYYHIAS-----------LMNMKREERISYVQE 206
Query: 291 ---KTDATLADL-VEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLV 346
+ + + DL + V V GR K YS +K++ + EE+ D+L +RV+ + ++
Sbjct: 207 AVDQINGAIKDLELSHVDVYGRPKHIYSIYRKMVDKHKAFEEIYDLLAVRVL---TDSIP 263
Query: 347 NTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLME 406
+T Y I S W +P R KDYIA PKANGY+SLH V D RPL E
Sbjct: 264 DT--------YAVLGAIHSKWTPIPGRFKDYIALPKANGYQSLHTTVIGPDG---RPL-E 311
Query: 407 IQIRTEEMDMLAVNGTASHAFYKGGLTNPEEA 438
+QIRT M +A G A+H YK + +EA
Sbjct: 312 VQIRTHHMHEVAEYGVAAHWAYKKNRGSNKEA 343
>gi|430834057|ref|ZP_19452067.1| RelA/SpoT family protein [Enterococcus faecium E0679]
gi|430485957|gb|ELA62838.1| RelA/SpoT family protein [Enterococcus faecium E0679]
Length = 786
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 160/319 (50%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL+MD ++ G L VVE ++++ +R+ G A L+ ++ +
Sbjct: 104 IQVAGILADLKMDPHTVATGFLHDVVEDTEITLEDLREEFGDDVAMLVDGVTKLGK---I 160
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK L D+R +++ LA RL MR L +L +Q I+ E ++I+
Sbjct: 161 KYKSHEEQLAENHRKMLLAMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIY 220
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + +++ + + E + +
Sbjct: 221 APLAHRLGISRIKWELEDTALRYLNPKQYYRIVHLMQTKREEREKYVSGTVEDIRIATEE 280
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
A+ + GR K YS +K+ + E+ D+L +RVI+ +
Sbjct: 281 LGIFAE------IYGRPKHIYSIYRKMKDQKKQFNEIYDLLAIRVIVDSIKD-------- 326
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKAN Y+SLH V G +EIQIRT+
Sbjct: 327 ---CYAVLGAIHTKWKPMPGRFKDYIAMPKANMYQSLHTTV----IGPAGNPVEIQIRTQ 379
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 380 EMHEIAEFGVAAHWAYKEG 398
>gi|300787167|ref|YP_003767458.1| GTP pyrophosphokinase [Amycolatopsis mediterranei U32]
gi|384150512|ref|YP_005533328.1| GTP pyrophosphokinase [Amycolatopsis mediterranei S699]
gi|399539049|ref|YP_006551712.1| GTP pyrophosphokinase [Amycolatopsis mediterranei S699]
gi|299796681|gb|ADJ47056.1| GTP pyrophosphokinase [Amycolatopsis mediterranei U32]
gi|340528666|gb|AEK43871.1| GTP pyrophosphokinase [Amycolatopsis mediterranei S699]
gi|398319819|gb|AFO78766.1| GTP pyrophosphokinase [Amycolatopsis mediterranei S699]
Length = 784
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 171/324 (52%), Gaps = 33/324 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LA+L MD + A LL VE G +++ ++ G A L+ ++
Sbjct: 105 ITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYAVESLKADFGDKVAELVDGVTKLD- 163
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
K+Q+ A +RK + D R L++ LA RL MR + +LP +Q + E
Sbjct: 164 ----KVQLGSSAEAETIRKMVIAMAKDPRVLVIKLADRLHNMRTMRFLPPEKQARKARET 219
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+++ APLAH + + +ELEDL+F L P Y D +R P DIY L+
Sbjct: 220 LEVLAPLAHRLGMATVKWELEDLAFAILQPKKY---DEIVRL-VADRAPSRDIY----LR 271
Query: 289 CLKTDATLADLVED---VSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNL 345
+ TD T ++LV V+GR K YS +K++ GR ++++D++G+R++++
Sbjct: 272 SVITDLT-SNLVSSRITAKVEGRPKHYYSIHQKMIVRGRDLDDIHDLVGVRILVEDV--- 327
Query: 346 VNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLM 405
R CY ++ +LW+ +P R KDYIA+P+ Y+SLH V + +GK PL
Sbjct: 328 --------RDCYAAMGVVHALWQPVPGRFKDYIAQPRFGVYQSLHTTV-IGPDGK--PL- 375
Query: 406 EIQIRTEEMDMLAVNGTASHAFYK 429
E+QIRT EM A G A+H YK
Sbjct: 376 EVQIRTYEMHRTAEYGIAAHWRYK 399
>gi|227903817|ref|ZP_04021622.1| GTP diphosphokinase [Lactobacillus acidophilus ATCC 4796]
gi|227868704|gb|EEJ76125.1| GTP diphosphokinase [Lactobacillus acidophilus ATCC 4796]
Length = 749
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/330 (34%), Positives = 167/330 (50%), Gaps = 37/330 (11%)
Query: 116 VALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRV-KNNVNLK 174
VA LA+L +D + I+AG L VE V+ +++++ G + ++ ++ K N
Sbjct: 60 VAGTLANLGLDPDTIAAGFLHDTVEDTPVTNDELKEKFGEDVSFIVDGVTKLNKYEYNSH 119
Query: 175 LQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHA 233
+ L A RK + D+R +++ LA RL M L +L +Q I+ E M I+A
Sbjct: 120 QEFL----AENHRKMLIAMAKDLRVIMVKLADRLHNMHTLQHLRPDKQRRIASETMDIYA 175
Query: 234 PLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQ----LLQC 289
PLA + + +ELED+SF YL P +Y + L+D+ + Q +
Sbjct: 176 PLADRLGIGTIKWELEDMSFHYLNPEAYYRIVN-----------LMDVKRSQREKYISDT 224
Query: 290 LKT-DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+KT TL +L + GR K YS KK++ + +E+ D+L +RVI+K
Sbjct: 225 IKTLKKTLDELGIKYDIYGRPKHIYSIYKKMVNKHKDFDEIYDLLAVRVIVKNV------ 278
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY + + WK MP R KDYIA PK NGY+SLH + + G RPL EIQ
Sbjct: 279 -----RDCYAVLGAVHTEWKPMPGRFKDYIAMPKVNGYQSLHTTI-IGPGG--RPL-EIQ 329
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEA 438
IRTE+M +A G A+H YK G N EA
Sbjct: 330 IRTEQMHEVAEYGVAAHWAYKRGNFNGVEA 359
>gi|419781279|ref|ZP_14307111.1| GTP diphosphokinase [Streptococcus oralis SK100]
gi|383184671|gb|EIC77185.1| GTP diphosphokinase [Streptococcus oralis SK100]
Length = 738
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/331 (32%), Positives = 169/331 (51%), Gaps = 34/331 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVN- 172
+ VA +LA L++DA ++ G L VVE ++ + G H+ + + V
Sbjct: 55 IQVAGILAKLKLDAVTVACGFLHDVVEDTDATLDDLEREFG-------HDVRIIVDGVTK 107
Query: 173 ---LKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ + L+++ A RK + DIR +++ L+ RL MR L +L + +Q IS E
Sbjct: 108 LGKVEYKSLEEQLAENHRKMLMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISRET 167
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLAH + + + +ELEDLSFRYL P + + ++ + L+D +++
Sbjct: 168 MEIYAPLAHRLGISSVKWELEDLSFRYLNPTEFYKITHMMKEKRREREALVD----EVVT 223
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L+ AT +L + GR K YS +K+ + EE+ D++ +R I+ S++
Sbjct: 224 KLEEYATERNL--KGKIYGRPKHIYSIYRKMQDKKKRFEEIYDLIAIRCILDTQSDV--- 278
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
Y + LWK MP R KDYIA KANGY+S+H V G P+ E Q
Sbjct: 279 --------YAMLGYVHELWKPMPGRFKDYIANRKANGYQSIHTTV----YGPKGPI-EFQ 325
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAK 439
IRT+EM +A G A+H YK G+ +K
Sbjct: 326 IRTKEMHEVAEYGVAAHWAYKKGIKGQVNSK 356
>gi|209548596|ref|YP_002280513.1| (p)ppGpp synthetase I SpoT/RelA [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209534352|gb|ACI54287.1| (p)ppGpp synthetase I, SpoT/RelA [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 744
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 165/335 (49%), Gaps = 38/335 (11%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ L VA +L D+ +D I+ LL +E + ++ + G L+ ++K
Sbjct: 46 ISHPLEVAAILTDMHLDESTIAVALLHDTIEDTTATRAEIDELFGEDIGRLVEGLTKIKK 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L L + A LRK L D +R L++ LA RL MR LD++ ++ IS E
Sbjct: 106 ---LDLVTKKAKQAENLRKLLLAISDDVRVLLVKLADRLHNMRTLDHMSADKRARISEET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLA + + ELE+LSFR++ P +Y ET +K L ++ K
Sbjct: 163 MEIYAPLAGRMGMQDMREELEELSFRHMNPEAY----------ETVTKRLEELSKRNEGI 212
Query: 289 CLKTDATLADL-----VEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIK--P 341
K +A L DL + V+GR K YS +K+ E+++DV G R+I++ P
Sbjct: 213 VKKIEAELRDLLVASGLTSAYVKGRQKKPYSVFRKMQSKSLSFEQLSDVYGFRLIVEDIP 272
Query: 342 SSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKT 401
S CY I+ + W+ +P R KDYI+ PK N YRSLH + G +
Sbjct: 273 S-------------CYRALGIVHTRWRVVPGRFKDYISTPKQNDYRSLHTTI----VGPS 315
Query: 402 RPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNPE 436
+E+QIRT+ M +A G A+H YK G TN +
Sbjct: 316 SQRIELQIRTKRMHEIAEFGIAAHTLYKDGATNAD 350
>gi|322374778|ref|ZP_08049292.1| GTP diphosphokinase [Streptococcus sp. C300]
gi|321280278|gb|EFX57317.1| GTP diphosphokinase [Streptococcus sp. C300]
Length = 738
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/331 (32%), Positives = 169/331 (51%), Gaps = 34/331 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVN- 172
+ VA +LA L++DA ++ G L VVE ++ + G H+ + + V
Sbjct: 55 IQVAGILAKLKLDAVTVACGFLHDVVEDTDATLDDLEREFG-------HDVRIIVDGVTK 107
Query: 173 ---LKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ + L+++ A RK + DIR +++ L+ RL MR L +L + +Q IS E
Sbjct: 108 LGKVEYKSLEEQLAENHRKMLMAMSEDIRVILVKLSDRLHNMRTLKHLRKDKQERISRET 167
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLAH + + + +ELEDLSFRYL P + + ++ + L+D +++
Sbjct: 168 MEIYAPLAHRLGISSVKWELEDLSFRYLNPTEFYKITHMMKEKRREREALVD----EVVT 223
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L+ AT +L + GR K YS +K+ + EE+ D++ +R I+ S++
Sbjct: 224 KLEEYATERNL--KGKIYGRPKHIYSIYRKMQDKKKRFEEIYDLIAIRCILDTQSDV--- 278
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
Y + LWK MP R KDYIA KANGY+S+H V G P+ E Q
Sbjct: 279 --------YAMLGYVHELWKPMPGRFKDYIANRKANGYQSIHTTV----YGPKGPI-EFQ 325
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAK 439
IRT+EM +A G A+H YK G+ +K
Sbjct: 326 IRTKEMHEVAEYGVAAHWAYKKGIKGQVNSK 356
>gi|226939389|ref|YP_002794462.1| SpoT [Laribacter hongkongensis HLHK9]
gi|226714315|gb|ACO73453.1| SpoT [Laribacter hongkongensis HLHK9]
Length = 724
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/325 (32%), Positives = 167/325 (51%), Gaps = 29/325 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T LSVA +L + ++DA ++A LL +E GV+ + ++ G A L+ +++
Sbjct: 62 ITHPLSVAQILTEWKLDAHGLAAALLHDTMEDTGVAKSTLAEKFGKQVAELVDGLSKLER 121
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L+ Q + A RK L DIR +I+ LA RL MR LD + ++ I+LE
Sbjct: 122 ---LEYQSKEARQAENFRKMVLAMARDIRVIIIKLADRLHNMRTLDSMREEKRRRIALET 178
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ ++ PLA+ + N + ELEDL F+YL+P Y + +R+ + L+ ++L
Sbjct: 179 LDVYTPLANRIGLNKVYRELEDLCFKYLYPNRYSVLAKAVRAARGNRRELVG----KILT 234
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIK--PSSNLV 346
+ A++ + ++GR K+ YS +K+ + EV D+ RVI+ PS
Sbjct: 235 AIARKLVEANI--EAGIRGREKNLYSIYRKMQEKQLSFSEVLDIYAFRVIVNDIPS---- 288
Query: 347 NTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLME 406
CY + SL+K +P + KDYIA PK+NGY+SLH + G +E
Sbjct: 289 ---------CYLALGALHSLYKPIPGKFKDYIAIPKSNGYQSLHTTL----FGPYGTPIE 335
Query: 407 IQIRTEEMDMLAVNGTASHAFYKGG 431
+QIRT +M +A +G ASH YK G
Sbjct: 336 VQIRTRDMHRVAESGVASHWMYKSG 360
>gi|15596131|ref|NP_249625.1| GTP pyrophosphokinase [Pseudomonas aeruginosa PAO1]
gi|107100390|ref|ZP_01364308.1| hypothetical protein PaerPA_01001415 [Pseudomonas aeruginosa PACS2]
gi|116048857|ref|YP_792342.1| GTP pyrophosphokinase [Pseudomonas aeruginosa UCBPP-PA14]
gi|218893097|ref|YP_002441966.1| GTP pyrophosphokinase [Pseudomonas aeruginosa LESB58]
gi|254245218|ref|ZP_04938540.1| GTP pyrophosphokinase [Pseudomonas aeruginosa 2192]
gi|296390712|ref|ZP_06880187.1| GTP pyrophosphokinase [Pseudomonas aeruginosa PAb1]
gi|313105818|ref|ZP_07792081.1| GTP pyrophosphokinase [Pseudomonas aeruginosa 39016]
gi|355647570|ref|ZP_09055107.1| hypothetical protein HMPREF1030_04193 [Pseudomonas sp. 2_1_26]
gi|386060166|ref|YP_005976688.1| GTP pyrophosphokinase [Pseudomonas aeruginosa M18]
gi|386064659|ref|YP_005979963.1| GTP pyrophosphokinase [Pseudomonas aeruginosa NCGM2.S1]
gi|392985589|ref|YP_006484176.1| GTP pyrophosphokinase [Pseudomonas aeruginosa DK2]
gi|416858716|ref|ZP_11913485.1| GTP pyrophosphokinase [Pseudomonas aeruginosa 138244]
gi|416875655|ref|ZP_11918813.1| GTP pyrophosphokinase [Pseudomonas aeruginosa 152504]
gi|418583603|ref|ZP_13147672.1| GTP pyrophosphokinase [Pseudomonas aeruginosa MPAO1/P1]
gi|418588968|ref|ZP_13152898.1| GTP pyrophosphokinase [Pseudomonas aeruginosa MPAO1/P2]
gi|419753887|ref|ZP_14280285.1| GTP pyrophosphokinase [Pseudomonas aeruginosa PADK2_CF510]
gi|421162455|ref|ZP_15621297.1| GTP pyrophosphokinase [Pseudomonas aeruginosa ATCC 25324]
gi|421169697|ref|ZP_15627704.1| GTP pyrophosphokinase [Pseudomonas aeruginosa ATCC 700888]
gi|421176068|ref|ZP_15633737.1| GTP pyrophosphokinase [Pseudomonas aeruginosa CI27]
gi|421182068|ref|ZP_15639553.1| GTP pyrophosphokinase [Pseudomonas aeruginosa E2]
gi|421515556|ref|ZP_15962242.1| GTP pyrophosphokinase [Pseudomonas aeruginosa PAO579]
gi|424940017|ref|ZP_18355780.1| GTP pyrophosphokinase [Pseudomonas aeruginosa NCMG1179]
gi|451987418|ref|ZP_21935576.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudomonas aeruginosa 18A]
gi|9946839|gb|AAG04323.1|AE004528_1 GTP pyrophosphokinase [Pseudomonas aeruginosa PAO1]
gi|115584078|gb|ABJ10093.1| GTP pyrophosphokinase [Pseudomonas aeruginosa UCBPP-PA14]
gi|126198596|gb|EAZ62659.1| GTP pyrophosphokinase [Pseudomonas aeruginosa 2192]
gi|218773325|emb|CAW29137.1| GTP pyrophosphokinase [Pseudomonas aeruginosa LESB58]
gi|310878583|gb|EFQ37177.1| GTP pyrophosphokinase [Pseudomonas aeruginosa 39016]
gi|334839201|gb|EGM17894.1| GTP pyrophosphokinase [Pseudomonas aeruginosa 138244]
gi|334841754|gb|EGM20376.1| GTP pyrophosphokinase [Pseudomonas aeruginosa 152504]
gi|346056463|dbj|GAA16346.1| GTP pyrophosphokinase [Pseudomonas aeruginosa NCMG1179]
gi|347306472|gb|AEO76586.1| GTP pyrophosphokinase [Pseudomonas aeruginosa M18]
gi|348033218|dbj|BAK88578.1| GTP pyrophosphokinase [Pseudomonas aeruginosa NCGM2.S1]
gi|354827764|gb|EHF11903.1| hypothetical protein HMPREF1030_04193 [Pseudomonas sp. 2_1_26]
gi|375047211|gb|EHS39760.1| GTP pyrophosphokinase [Pseudomonas aeruginosa MPAO1/P1]
gi|375052127|gb|EHS44586.1| GTP pyrophosphokinase [Pseudomonas aeruginosa MPAO1/P2]
gi|384399826|gb|EIE46191.1| GTP pyrophosphokinase [Pseudomonas aeruginosa PADK2_CF510]
gi|392321094|gb|AFM66474.1| GTP pyrophosphokinase [Pseudomonas aeruginosa DK2]
gi|404349284|gb|EJZ75621.1| GTP pyrophosphokinase [Pseudomonas aeruginosa PAO579]
gi|404525836|gb|EKA36084.1| GTP pyrophosphokinase [Pseudomonas aeruginosa ATCC 700888]
gi|404531419|gb|EKA41374.1| GTP pyrophosphokinase [Pseudomonas aeruginosa CI27]
gi|404534535|gb|EKA44267.1| GTP pyrophosphokinase [Pseudomonas aeruginosa ATCC 25324]
gi|404542788|gb|EKA52097.1| GTP pyrophosphokinase [Pseudomonas aeruginosa E2]
gi|451755036|emb|CCQ88099.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudomonas aeruginosa 18A]
gi|453047959|gb|EME95672.1| GTP pyrophosphokinase [Pseudomonas aeruginosa PA21_ST175]
Length = 747
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 160/332 (48%), Gaps = 27/332 (8%)
Query: 105 DSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHES 164
+ S L +A +LADL++D E + A ++ + V G ++++ V G A L+
Sbjct: 60 EGTSSFQTGLEIAEILADLKLDQESLVAAVIYRGVREGKITLEAVNKHFGPVVAKLIEGV 119
Query: 165 LR---VKNNVNLKLQVLDDETAAA--LRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPR 218
LR + ++N + ++ A LRK + D +R ++ LA R +R +
Sbjct: 120 LRMAAISASLNPRHSMVLGTQAQVENLRKMLVAMVDDVRVALIKLAERTCAIRAVKNADE 179
Query: 219 YQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPL 278
++ ++ EV I+APLAH + ++ +ELEDLSFRYL P Y + L +
Sbjct: 180 EKRHRVAREVFDIYAPLAHRLGIGHIKWELEDLSFRYLEPDQYKQIAKLLHERRLDREQY 239
Query: 279 IDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVI 338
I QL + L ADL GR K YS +K+ + G ++ DV +RV+
Sbjct: 240 IANVMSQLKEALAATGVQADL------SGRAKHIYSIWRKMQRKGLDFSQIYDVRAVRVL 293
Query: 339 IKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDN 398
+ R CYT I+ +LW+ +P DYIA PK NGYRSLH AV +
Sbjct: 294 VPEM-----------RDCYTALGIVHTLWRHIPKEFDDYIANPKENGYRSLHTAV-IGPE 341
Query: 399 GKTRPLMEIQIRTEEMDMLAVNGTASHAFYKG 430
GK ++E+QIRT M A G +H YKG
Sbjct: 342 GK---VLEVQIRTHSMHEEAELGVCAHWRYKG 370
>gi|50541737|gb|AAT78347.1| RelA [Rhizobium etli]
Length = 744
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 165/335 (49%), Gaps = 38/335 (11%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
++ L VA +L D+ +D I+ LL +E + ++ + G L+ ++K
Sbjct: 46 ISHPLEVAAILTDMHLDESTIAVALLHDTIEDTTATRAEIDELFGEDIGRLVEGLTKIKK 105
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
L L + A LRK L D +R L++ LA RL MR LD++ ++ IS E
Sbjct: 106 ---LDLVTKKAKQAENLRKLLLAISDDVRVLLVKLADRLHNMRTLDHMSADKRARISEET 162
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLA + + ELE+LSFR++ P +Y ET +K L ++ K
Sbjct: 163 MEIYAPLAGRMGMQDMREELEELSFRHMNPEAY----------ETVTKRLEELSKRNEGI 212
Query: 289 CLKTDATLADL-----VEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIK--P 341
K +A L DL + V+GR K YS +K+ E+++DV G R+I++ P
Sbjct: 213 VKKIEAELRDLLVASGLTSAYVKGRQKKPYSVFRKMQSKSLSFEQLSDVYGFRLIVEDIP 272
Query: 342 SSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKT 401
S CY I+ + W+ +P R KDYI+ PK N YRSLH + G +
Sbjct: 273 S-------------CYRALGIVHTRWRVVPGRFKDYISTPKQNDYRSLHTTI----VGPS 315
Query: 402 RPLMEIQIRTEEMDMLAVNGTASHAFYKGGLTNPE 436
+E+QIRT+ M +A G A+H YK G TN +
Sbjct: 316 SQRIELQIRTKRMHEIAEFGIAAHTLYKDGATNAD 350
>gi|320594365|gb|ADW54434.1| RelA [Pseudomonas sp. DF41]
gi|342674037|gb|AEL31268.1| RelA [Pseudomonas chlororaphis]
Length = 747
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 160/332 (48%), Gaps = 27/332 (8%)
Query: 105 DSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHES 164
+ S L +A +LADL++D E + A ++ + V G ++++ V G A L+
Sbjct: 60 EGTSSFQTGLEIAEILADLKLDQESLVAAVIYRGVREGKITLEAVNKHFGPVVAKLIEGV 119
Query: 165 LR---VKNNVNLKLQVLDDETAAA--LRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPR 218
LR + ++N + ++ A LRK + D +R ++ LA R +R +
Sbjct: 120 LRMAAISASLNPRHSMVLGTQAQVENLRKMLVAMVDDVRVALIRLAERTCAIRAVKNADE 179
Query: 219 YQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPL 278
++ ++ EV I+APLAH + ++ +ELEDLSFRYL P Y + L +
Sbjct: 180 EKRHCVAREVFDIYAPLAHRLGIGHIKWELEDLSFRYLEPDQYKQIAKLLHERRLDREQY 239
Query: 279 IDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVI 338
I QL + L ADL GR K YS +K+ + G ++ DV +RV+
Sbjct: 240 IANVMSQLKEALAATGVQADL------SGRAKHIYSIWRKMQRKGLDFSQIYDVRAVRVL 293
Query: 339 IKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDN 398
+ R CYT I+ +LW+ +P DYIA PK NGYRSLH AV +
Sbjct: 294 VPEM-----------RDCYTALGIVHTLWRHIPKEFDDYIANPKENGYRSLHTAV-IGPE 341
Query: 399 GKTRPLMEIQIRTEEMDMLAVNGTASHAFYKG 430
GK ++E+QIRT M A G +H YKG
Sbjct: 342 GK---VLEVQIRTHSMHEEAELGVCAHWRYKG 370
>gi|289434803|ref|YP_003464675.1| GTP pyrophosphokinase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171047|emb|CBH27589.1| GTP pyrophosphokinase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
Length = 738
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 164/319 (51%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L +L+MD +++G L VVE V++ + + G A L+ ++ +
Sbjct: 55 IQVAGILVELKMDPSTVASGFLHDVVEDTPVTLADLEEEFGSEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP +Q I+ E ++I
Sbjct: 112 KYKSHEEQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPVEKQRRIANETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ + Y ++ +
Sbjct: 172 APLAHRLGISRVKWELEDTALRYLNPQQYYRIVHLMKQKRDARER----YLHDVIDGVNE 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ D+S GR K YS +K+ + + E+ D+L +R+++ +
Sbjct: 228 NLDELNIQADIS--GRPKHIYSIYRKMSEQNKQFNEIYDLLAVRIVVSSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY II + WK MP R KDYIA PK+N Y+S+H V + G+ PL E+QIRT
Sbjct: 278 ---CYAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTV-IGPQGE--PL-EVQIRTH 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 331 EMHQIAEYGVAAHWAYKEG 349
>gi|431702948|ref|ZP_19525071.1| RelA/SpoT family protein [Enterococcus faecium E1904]
gi|430597031|gb|ELB34842.1| RelA/SpoT family protein [Enterococcus faecium E1904]
Length = 737
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 160/319 (50%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +LADL+MD ++ G L VVE ++++ +R+ G A L+ ++ +
Sbjct: 55 IQVAGILADLKMDPHTVATGFLHDVVEDTEITLEDLREEFGDDVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK L D+R +++ LA RL MR L +L +Q I+ E ++I+
Sbjct: 112 KYKSHEEQLAENHRKMLLAMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + +++ + + E + +
Sbjct: 172 APLAHRLGISRIKWELEDTALRYLNPKQYYRIVHLMQTKREEREKYVSGTVEDIRIATEE 231
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
A+ + GR K YS +K+ + E+ D+L +RVI+ +
Sbjct: 232 LGIFAE------IYGRPKHIYSIYRKMKDQKKQFNEIYDLLAIRVIVDSIKD-------- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY I + WK MP R KDYIA PKAN Y+SLH V G +EIQIRT+
Sbjct: 278 ---CYAVLGAIHTKWKPMPGRFKDYIAMPKANMYQSLHTTV----IGPAGNPVEIQIRTQ 330
Query: 413 EMDMLAVNGTASHAFYKGG 431
EM +A G A+H YK G
Sbjct: 331 EMHEIAEFGVAAHWAYKEG 349
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.133 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,385,171,024
Number of Sequences: 23463169
Number of extensions: 344892953
Number of successful extensions: 1185258
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5261
Number of HSP's successfully gapped in prelim test: 5337
Number of HSP's that attempted gapping in prelim test: 1154435
Number of HSP's gapped (non-prelim): 16822
length of query: 576
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 428
effective length of database: 8,886,646,355
effective search space: 3803484639940
effective search space used: 3803484639940
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.4 bits)