BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008155
(576 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8CS97|RELA_STAES GTP pyrophosphokinase OS=Staphylococcus epidermidis (strain ATCC
12228) GN=relA PE=3 SV=1
Length = 729
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/340 (32%), Positives = 181/340 (53%), Gaps = 25/340 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V+D A ++ ++K +
Sbjct: 55 IQVAGILTEMRLDGPTIVAGFLHDVIEDTSYTFEDVKDMFNEEIARIVDGVTKLKK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 112 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I + +K
Sbjct: 172 APLAHRLGINTIKWELEDTALRYIDSVQYFRIVNLMKKKRSEREAYI----TNAINKIKN 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ T +L +++ GR K YS +K++K + +++ D+L +R+I+ N +N
Sbjct: 228 EMTKMNLSGEIN--GRPKHIYSIYRKMIKQKKQFDQIFDLLAIRIIV----NSIND---- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY T ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 278 ---CYATLGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTV-VGPNGD--PL-EIQIRTH 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELA 452
EM +A +G A+H YK G T ++ + + + ELA
Sbjct: 331 EMHEIAEHGVAAHWAYKEGKTVNQKTQDFQNKLNWLKELA 370
>sp|Q5HNR8|RELA_STAEQ GTP pyrophosphokinase OS=Staphylococcus epidermidis (strain ATCC
35984 / RP62A) GN=relA PE=3 SV=1
Length = 729
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/340 (32%), Positives = 181/340 (53%), Gaps = 25/340 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V+D A ++ ++K +
Sbjct: 55 IQVAGILTEMRLDGPTIVAGFLHDVIEDTSYTFEDVKDMFNEEIARIVDGVTKLKK---V 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 112 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIY 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I + +K
Sbjct: 172 APLAHRLGINTIKWELEDTALRYIDSVQYFRIVNLMKKKRSEREAYI----TNAINKIKN 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ T +L +++ GR K YS +K++K + +++ D+L +R+I+ N +N
Sbjct: 228 EMTKMNLSGEIN--GRPKHIYSIYRKMIKQKKQFDQIFDLLAIRIIV----NSIND---- 277
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY T ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 278 ---CYATLGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTV-VGPNGD--PL-EIQIRTH 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELA 452
EM +A +G A+H YK G T ++ + + + ELA
Sbjct: 331 EMHEIAEHGVAAHWAYKEGKTVNQKTQDFQNKLNWLKELA 370
>sp|Q6GG70|RELA_STAAR GTP pyrophosphokinase OS=Staphylococcus aureus (strain MRSA252)
GN=relA PE=3 SV=1
Length = 736
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V++ A ++ ++K +
Sbjct: 62 IQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKEMFNEEVARIVDGVTKLKK---V 118
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 119 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIY 178
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I E + ++T
Sbjct: 179 APLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYI----ETAIDRIRT 234
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ D++ GR K YS +K++K + +++ D+L +RVI+ N +N
Sbjct: 235 EMDRMNIEGDIN--GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV----NSIND---- 284
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 285 ---CYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV-VGPNGD--PL-EIQIRTF 337
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A +G A+H YK G
Sbjct: 338 DMHEIAEHGVAAHWAYKEG 356
>sp|P0A0E9|RELA_STAAW GTP pyrophosphokinase OS=Staphylococcus aureus (strain MW2) GN=relA
PE=3 SV=1
Length = 736
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V++ A ++ ++K +
Sbjct: 62 IQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKEMFNEEVARIVDGVTKLKK---V 118
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 119 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIY 178
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I E + ++T
Sbjct: 179 APLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYI----ETAIDRIRT 234
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ D++ GR K YS +K++K + +++ D+L +RVI+ N +N
Sbjct: 235 EMDRMNIEGDIN--GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV----NSIND---- 284
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 285 ---CYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV-VGPNGD--PL-EIQIRTF 337
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A +G A+H YK G
Sbjct: 338 DMHEIAEHGVAAHWAYKEG 356
>sp|P0A0F0|RELA_STAAU GTP pyrophosphokinase OS=Staphylococcus aureus GN=relA PE=3 SV=1
Length = 736
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V++ A ++ ++K +
Sbjct: 62 IQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKEMFNEEVARIVDGVTKLKK---V 118
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 119 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIY 178
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I E + ++T
Sbjct: 179 APLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYI----ETAIDRIRT 234
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ D++ GR K YS +K++K + +++ D+L +RVI+ N +N
Sbjct: 235 EMDRMNIEGDIN--GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV----NSIND---- 284
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 285 ---CYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV-VGPNGD--PL-EIQIRTF 337
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A +G A+H YK G
Sbjct: 338 DMHEIAEHGVAAHWAYKEG 356
>sp|Q6G8T5|RELA_STAAS GTP pyrophosphokinase OS=Staphylococcus aureus (strain MSSA476)
GN=relA PE=3 SV=1
Length = 736
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V++ A ++ ++K +
Sbjct: 62 IQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKEMFNEEVARIVDGVTKLKK---V 118
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 119 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIY 178
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I E + ++T
Sbjct: 179 APLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYI----ETAIDRIRT 234
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ D++ GR K YS +K++K + +++ D+L +RVI+ N +N
Sbjct: 235 EMDRMNIEGDIN--GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV----NSIND---- 284
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 285 ---CYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV-VGPNGD--PL-EIQIRTF 337
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A +G A+H YK G
Sbjct: 338 DMHEIAEHGVAAHWAYKEG 356
>sp|Q99TL8|RELA_STAAN GTP pyrophosphokinase OS=Staphylococcus aureus (strain N315)
GN=relA PE=1 SV=2
Length = 736
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V++ A ++ ++K +
Sbjct: 62 IQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKEMFNEEVARIVDGVTKLKK---V 118
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 119 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIY 178
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I E + ++T
Sbjct: 179 APLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYI----ETAIDRIRT 234
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ D++ GR K YS +K++K + +++ D+L +RVI+ N +N
Sbjct: 235 EMDRMNIEGDIN--GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV----NSIND---- 284
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 285 ---CYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV-VGPNGD--PL-EIQIRTF 337
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A +G A+H YK G
Sbjct: 338 DMHEIAEHGVAAHWAYKEG 356
>sp|Q931Q4|RELA_STAAM GTP pyrophosphokinase OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=relA PE=3 SV=2
Length = 736
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 25/319 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L ++++D I AG L V+E + + V++ A ++ ++K +
Sbjct: 62 IQVAGILTEMRLDGPTIVAGFLHDVIEDTPYTFEDVKEMFNEEVARIVDGVTKLKK---V 118
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F D+R +++ LA RL MR L +PR +Q+ IS E ++I+
Sbjct: 119 KYRSKEEQQAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIY 178
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + N + +ELED + RY+ Y + ++ + + I E + ++T
Sbjct: 179 APLAHHLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYI----ETAIDRIRT 234
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ ++ D++ GR K YS +K++K + +++ D+L +RVI+ N +N
Sbjct: 235 EMDRMNIEGDIN--GRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV----NSIND---- 284
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY ++ +LWK MP R KDYIA PK N Y+SLH V V NG PL EIQIRT
Sbjct: 285 ---CYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTV-VGPNGD--PL-EIQIRTF 337
Query: 413 EMDMLAVNGTASHAFYKGG 431
+M +A +G A+H YK G
Sbjct: 338 DMHEIAEHGVAAHWAYKEG 356
>sp|O54408|RELA_BACSU GTP pyrophosphokinase OS=Bacillus subtilis (strain 168) GN=relA
PE=3 SV=3
Length = 734
Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 110/326 (33%), Positives = 168/326 (51%), Gaps = 25/326 (7%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
+ VA +L DL+MD I+ G L VVE V++ +++ A L+ ++ +
Sbjct: 55 IQVAGILVDLEMDPSTIAGGFLHDVVEDTDVTLDDLKEAFSEEVAMLVDGVTKLGK---I 111
Query: 174 KLQVLDDETAAALRK-FCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + +++ A RK F DIR +++ LA RL MR L +LP+ +Q IS E ++I
Sbjct: 112 KYKSQEEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIF 171
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + +ELED + RYL P Y + ++ ++Y ++++ +K
Sbjct: 172 APLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAER----ELYVDEVVNEVKK 227
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
++ D S GR K YS +K++ + E+ D+L +R+ LVN+
Sbjct: 228 RVEEVNIKADFS--GRPKHIYSIYRKMVLQNKQFNEIYDLLAVRI-------LVNSI--- 275
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
+ CY II + WK MP R KDYIA PK N Y+SLH V + G PL E+QIRT
Sbjct: 276 -KDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV-IGPKGD--PL-EVQIRTF 330
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEA 438
EM +A G A+H YK G E A
Sbjct: 331 EMHEIAEYGVAAHWAYKEGKAANEGA 356
>sp|O67012|SPOT_AQUAE Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Aquifex
aeolicus (strain VF5) GN=spoT PE=3 SV=1
Length = 696
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/326 (35%), Positives = 175/326 (53%), Gaps = 28/326 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L+VAL LA+L MD E I A LL +E + +++++R G A L+ ++ +
Sbjct: 54 LNVALKLAELGMDHETIIAALLHDTLEDTDTTYEEIKERFGERVAKLVEGVTKI-GKIKY 112
Query: 174 KLQVLDDETAAALRKFCL-TYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K E A RK L T D R ++L L+ RLD ++ L ++ I+ E M+I+
Sbjct: 113 K-----SEQAENYRKLILATAEDPRVILLKLSDRLDNVKTLWVFREEKRKKIAKETMEIY 167
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + ELED +F+YL+P Y V +++ K L + ++ ++ ++
Sbjct: 168 APLAHRLGVWSIKNELEDWAFKYLYPEEYEKVRNFVKE---SRKNLEEYLRKYVIPKVRK 224
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ L + ++ R K YS +K + G E+V+D+LG+R+I VNT V
Sbjct: 225 E--LEKYGIEAEIKYRSKHYYSIWEKTRRKGIRLEDVHDILGVRII-------VNT--VP 273
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
E CYT II SL++ +P + KDYI+ PK N Y+SLH V ++D GK L+E QIRT
Sbjct: 274 E--CYTVLGIIHSLFRPVPGKFKDYISLPKPNLYQSLHTTV-IADKGK---LVEFQIRTW 327
Query: 413 EMDMLAVNGTASHAFYKGGLTNPEEA 438
EM A G ASH YK G NP +A
Sbjct: 328 EMHERAEKGIASHWAYKEG-KNPSDA 352
>sp|Q54089|RELA_STREQ Bifunctional (p)ppGpp synthase/hydrolase RelA OS=Streptococcus
dysgalactiae subsp. equisimilis GN=relA PE=1 SV=1
Length = 739
Score = 149 bits (375), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 173/347 (49%), Gaps = 26/347 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ + VA +LADL +DA ++ G L VVE +++ + G ++ ++
Sbjct: 51 IVHPIQVAGILADLHLDAVTVACGFLHDVVEDTDITLDNIEFDFGKDVRDIVDGVTKLGK 110
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
++ + +++ A RK + DIR +++ LA RL MR L +L + +Q IS E
Sbjct: 111 ---VEYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRET 167
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
M+I+APLAH + + + +ELEDL+FRYL + + + + L+D ++
Sbjct: 168 MEIYAPLAHRLGISRIKWELEDLAFRYLNETEFYKISHMMNEKRREREALVD----DIVT 223
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
+K+ T L D V GR K YS +K+ + +++ D++ +R +++ S++
Sbjct: 224 KIKSYTTEQGLFGD--VYGRPKHIYSIYRKMRDKKKRFDQIFDLIAIRCVMETQSDV--- 278
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
Y I LW+ MP R KDYIA PKANGY+S+H V G P+ EIQ
Sbjct: 279 --------YAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTV----YGPKGPI-EIQ 325
Query: 409 IRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELAALR 455
IRT+EM +A G A+H YK G+ K M EL L+
Sbjct: 326 IRTKEMHQVAEYGVAAHWAYKKGVRGKVNQAEQKVGMNWIKELVELQ 372
>sp|O51216|SPOT_BORBU Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
OS=Borrelia burgdorferi (strain ATCC 35210 / B31 / CIP
102532 / DSM 4680) GN=spoT PE=3 SV=1
Length = 667
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 173/353 (49%), Gaps = 41/353 (11%)
Query: 86 LFKALKLSIPMLQSLPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVS 145
+FKAL+++ L + + V+L LA Q+D + AGLL V+E V
Sbjct: 40 IFKALEIA-EQLHYGQYRESGEPYIIHPIMVSLFLAKFQLDFKATIAGLLHDVLEDTNVE 98
Query: 146 IQQVRDRI---------GIGTAHLLHESLRVKNNVNLKLQVLDDETAAALRKFCLTYYDI 196
+++ G+ H LH R N ++ F +T+ DI
Sbjct: 99 KEEIVKEFDEEILSLIDGVTKIHDLHNKTRSIKEANTISKMF----------FAMTH-DI 147
Query: 197 RALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYL 256
R +I+ LA +L M L YLP+ +Q I+ + + + P+A + + L LEDLSF++L
Sbjct: 148 RIIIIKLADKLHNMTTLSYLPKNRQDRIAKDCLSTYVPIAERLGISSLKTYLEDLSFKHL 207
Query: 257 FPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTM 316
+P Y + +L ET + +YK +L ++ + + + +++V R K YS
Sbjct: 208 YPKDYKEIKNFLS--ETKIEREKKLYKGKL--SIEKELQKSGIEAEITV--RSKHFYSIF 261
Query: 317 KKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKD 376
+K+ ++ D LG+R+I K ++ CY EI+ +WK +P R KD
Sbjct: 262 RKMQTRTNKLTQIFDTLGIRIICKK-----------QKECYEILEIVHRVWKPIPGRLKD 310
Query: 377 YIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYK 429
YIA PK N Y+SLH V + ++ + L+EIQIRTEEMD +A G A+H YK
Sbjct: 311 YIASPKENKYQSLHTTVRIPEDNQ---LIEIQIRTEEMDRIANYGVAAHWIYK 360
>sp|P74007|SPOT_SYNY3 Probable guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=spoT
PE=3 SV=1
Length = 760
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/327 (34%), Positives = 161/327 (49%), Gaps = 24/327 (7%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ ++VA LL DL D +I+AG L VVE +SI+Q+ G TA L+ E + +
Sbjct: 77 IAHPVAVAGLLRDLGGDEAMIAAGFLHDVVEDTDISIEQIEALFGEETASLV-EGVTKLS 135
Query: 170 NVNLKLQVLDDETAAALRKFCLTYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVM 229
N + + R F DIR +++ LA RL MR LD L +Q I+ E
Sbjct: 136 KFNFS-STTEHQAENFRRMFLAMAKDIRVIVVKLADRLHNMRTLDALSPEKQRRIARETK 194
Query: 230 KIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQC 289
I APLA+ + +ELEDLSF+YL P SY + + + + ++ K+ L
Sbjct: 195 DIFAPLANRLGIWRFKWELEDLSFKYLEPDSYRKIQSLVVEKRGDRESRLETVKDMLRFR 254
Query: 290 LKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTS 349
L+ + +E +QGR K Y K+ + EE+ D+ LR+I++
Sbjct: 255 LRDEG-----IEHFELQGRPKHLYGIYYKMTSQDKAFEEIYDIAALRIIVESK------- 302
Query: 350 EVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQI 409
GE CY ++ ++K +P R KDYI PK N Y+SLH V G T +EIQI
Sbjct: 303 --GE--CYRALSVVHDVFKPIPGRFKDYIGLPKPNRYQSLHTTV----LGLTSRPLEIQI 354
Query: 410 RTEEMDMLAVNGTASHAFYK--GGLTN 434
RTEEM +A G A+H YK GG N
Sbjct: 355 RTEEMHHVAEYGIAAHWKYKESGGSEN 381
>sp|O34098|SPOT_SPICI Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
OS=Spiroplasma citri GN=spoT PE=3 SV=1
Length = 749
Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 178/337 (52%), Gaps = 35/337 (10%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRV-----K 168
L LA +M + + AGLL V+E + +++++ GI A+L+ +V +
Sbjct: 54 LWTTFFLAQWRMGPKTLIAGLLHDVLEDTPATFEELQELFGIEIANLVEGVTKVSYFAKE 113
Query: 169 NNVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLE 227
N +K Q L RK L+ DIR +I+ LA RL ++ + YL +Q +I+ E
Sbjct: 114 NRTQIKAQYL--------RKLYLSMAKDIRVIIVKLADRLHNLKTIGYLKPERQQIIARE 165
Query: 228 VMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLL 287
++I++ +AH + + E+ED+SF+ + P Y + + L S + I+ E+L
Sbjct: 166 SLEIYSAIAHRLGMKAVKQEIEDISFKIINPVQYNKIVSLLESSNKERENTINQKIEELK 225
Query: 288 QCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVN 347
+ L T+ ++ V V GR KS YS +K+ + G+ ++++D+L +R+I
Sbjct: 226 KILITEKKMS-----VKVYGRSKSIYSIYRKMNQFGKNFDDIHDILAVRII--------- 271
Query: 348 TSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEI 407
T+ V + CY + + + +R KDYIA PK N Y+SLH + V+D+G + E+
Sbjct: 272 TNSVDD--CYKVLGFVHQHYTPLNNRFKDYIATPKHNLYQSLHTTI-VADDG---LIFEV 325
Query: 408 QIRTEEMDMLAVNGTASHAFYKGGLTNPEEAKRLKAI 444
QIRTEEMD LA G A+H YK G N + AK+ K I
Sbjct: 326 QIRTEEMDELAEQGVAAHWRYKEG-ENYDIAKKQKDI 361
>sp|O52177|RELA_MYXXA GTP pyrophosphokinase OS=Myxococcus xanthus GN=relA PE=3 SV=1
Length = 757
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 159/323 (49%), Gaps = 22/323 (6%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L L VA +L +L++D I GLL +E + +++ + G AHL+ ++
Sbjct: 64 LVHPLEVAGILGELKLDEASIVTGLLHDTIEDTLATEEELTELFGSEVAHLVDGVTKLSK 123
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
+++ A RK + DIR +++ LA R MR LD++ +Q I+ E
Sbjct: 124 FSASASLSQEEKQAENFRKMIIAMAQDIRVILVKLADRTHNMRTLDHMSEEKQARIAQET 183
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
+ I+APLA+ + +++ ELEDLSFRY+ P + + L + + I+
Sbjct: 184 LDIYAPLANRLGISWIKTELEDLSFRYVKPQEFFALQAKLNKRKKEREKYIED------T 237
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
C + LA+ V GR+K YS KK+ G ++++D++ R II P++
Sbjct: 238 CDLIRSKLAERGLKGEVSGRFKHVYSIYKKIKSQGIDFDQIHDIIAFR-IIAPTAP---- 292
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
+CY ++ +WK +P R KD+IA PK N Y+SLH + G +E+Q
Sbjct: 293 ------SCYEALGLVHEMWKPVPGRFKDFIAIPKPNMYQSLHTTI----IGPLSERVEVQ 342
Query: 409 IRTEEMDMLAVNGTASHAFYKGG 431
IRT EM +A G A+H YK G
Sbjct: 343 IRTSEMHKIAEEGIAAHWKYKEG 365
>sp|Q8CY42|RSH_BRUSU GTP pyrophosphokinase rsh OS=Brucella suis biovar 1 (strain 1330)
GN=rsh PE=1 SV=1
Length = 750
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 167/337 (49%), Gaps = 39/337 (11%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ L VA +L D+ +D I+ LL +E + Q++ G L+ ++K
Sbjct: 46 FSHPLEVAAILTDMHLDEATIAIALLHDTIEDTTATRQEIDQLFGPEIGKLVEGLTKLK- 104
Query: 170 NVNLKLQVLDDETAAA--LRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISL 226
KL ++ + A LRK L D+R L++ LA RL MR L + ++L I+
Sbjct: 105 ----KLDLVSKKAVQAENLRKLLLAISEDVRVLLVKLADRLHNMRTLGVMCEDKRLRIAE 160
Query: 227 EVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQL 286
E M I+APLA + + ELE+L+FRY+ P D W R+ L++ L
Sbjct: 161 ETMDIYAPLAGRMGMQDMREELEELAFRYINP------DAW-RAVTDRLAELLE-KNRGL 212
Query: 287 LQCLKTDATLADLVE----DVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPS 342
LQ ++TD L+++ E SV+ R K +S +K+ G E+++D+ G RV++
Sbjct: 213 LQKIETD--LSEIFEKNGIKASVKSRQKKPWSVFRKMETKGLSFEQLSDIFGFRVMVDTV 270
Query: 343 SNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTR 402
+ CY +I + W +P R KDYI+ PK N YRS+H + G +R
Sbjct: 271 QD-----------CYRALGLIHTTWSMVPGRFKDYISTPKQNDYRSIHTTI----IGPSR 315
Query: 403 PLMEIQIRTEEMDMLAVNGTASHAFYK--GGLTNPEE 437
+E+QIRT EMD +A G A+H+ YK G NP +
Sbjct: 316 QRIELQIRTREMDEIAEFGVAAHSIYKDRGSANNPHK 352
>sp|Q8YG65|RSH_BRUME GTP pyrophosphokinase rsh OS=Brucella melitensis biotype 1 (strain
16M / ATCC 23456 / NCTC 10094) GN=rsh PE=1 SV=2
Length = 750
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 167/337 (49%), Gaps = 39/337 (11%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ L VA +L D+ +D I+ LL +E + Q++ G L+ ++K
Sbjct: 46 FSHPLEVAAILTDMHLDEATIAIALLHDTIEDTTATRQEIDQLFGPEIGKLVEGLTKLK- 104
Query: 170 NVNLKLQVLDDETAAA--LRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISL 226
KL ++ + A LRK L D+R L++ LA RL MR L + ++L I+
Sbjct: 105 ----KLDLVSKKAVQAENLRKLLLAISEDVRVLLVKLADRLHNMRTLGVMREDKRLRIAE 160
Query: 227 EVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQL 286
E M I+APLA + + ELE+L+FRY+ P D W R+ L++ L
Sbjct: 161 ETMDIYAPLAGRMGMQDMREELEELAFRYINP------DAW-RAVTDRLAELLE-KNRGL 212
Query: 287 LQCLKTDATLADLVE----DVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPS 342
LQ ++TD L+++ E SV+ R K +S +K+ G E+++D+ G RV++
Sbjct: 213 LQKIETD--LSEIFEKNGIKASVKSRQKKPWSVFRKMESKGLSFEQLSDIFGFRVMVDTV 270
Query: 343 SNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTR 402
+ CY +I + W +P R KDYI+ PK N YRS+H + G +R
Sbjct: 271 QD-----------CYRALGLIHTTWSMVPGRFKDYISTPKQNDYRSIHTTI----IGPSR 315
Query: 403 PLMEIQIRTEEMDMLAVNGTASHAFYK--GGLTNPEE 437
+E+QIRT EMD +A G A+H+ YK G NP +
Sbjct: 316 QRIELQIRTREMDEIAEFGVAAHSIYKDRGSANNPHK 352
>sp|A5VPI9|RSH_BRUO2 GTP pyrophosphokinase rsh OS=Brucella ovis (strain ATCC 25840 /
63/290 / NCTC 10512) GN=rsh PE=3 SV=1
Length = 750
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 167/337 (49%), Gaps = 39/337 (11%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ L VA +L D+ +D I+ LL +E + Q++ G L+ ++K
Sbjct: 46 FSHPLEVAAILTDMHLDEATIAIALLHDTIEDTTATRQEIDQLFGPEIGKLVEGLTKLK- 104
Query: 170 NVNLKLQVLDDETAAA--LRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISL 226
KL ++ + A LRK L D+R L++ LA RL MR L + ++L I+
Sbjct: 105 ----KLDLVSKKAVQAENLRKLLLAISEDVRVLLVKLADRLHNMRTLGVMREDKRLRIAE 160
Query: 227 EVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQL 286
E M I+APLA + + ELE+L+FRY+ P D W R+ L++ L
Sbjct: 161 ETMDIYAPLAGRMGMQDMREELEELAFRYINP------DAW-RAVTDRLAELLE-KNRGL 212
Query: 287 LQCLKTDATLADLVE----DVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPS 342
LQ ++TD L+++ E SV+ R K +S +K+ G E+++D+ G RV++
Sbjct: 213 LQKIETD--LSEIFEKNGIKASVKSRQKKPWSVFRKMETKGLSFEQLSDIFGFRVMVDTV 270
Query: 343 SNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTR 402
+ CY +I + W +P R KDYI+ PK N YRS+H + G +R
Sbjct: 271 QD-----------CYRALGLIHTTWSMVPGRFKDYISTPKQNDYRSIHTTI----IGPSR 315
Query: 403 PLMEIQIRTEEMDMLAVNGTASHAFYK--GGLTNPEE 437
+E+QIRT EMD +A G A+H+ YK G NP +
Sbjct: 316 QRIELQIRTREMDEIAEFGVAAHSIYKDRGSANNPHK 352
>sp|Q57E90|RSH_BRUAB GTP pyrophosphokinase rsh OS=Brucella abortus biovar 1 (strain
9-941) GN=rsh PE=1 SV=1
Length = 750
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 167/337 (49%), Gaps = 39/337 (11%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ L VA +L D+ +D I+ LL +E + Q++ G L+ ++K
Sbjct: 46 FSHPLEVAAILTDMHLDEATIAIALLHDTIEDTTATRQEIDQLFGPEIGKLVEGLTKLK- 104
Query: 170 NVNLKLQVLDDETAAA--LRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISL 226
KL ++ + A LRK L D+R L++ LA RL MR L + ++L I+
Sbjct: 105 ----KLDLVSKKAVQAENLRKLLLAISEDVRVLLVKLADRLHNMRTLGVMREDKRLRIAE 160
Query: 227 EVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQL 286
E M I+APLA + + ELE+L+FRY+ P D W R+ L++ L
Sbjct: 161 ETMDIYAPLAGRMGMQDMREELEELAFRYINP------DAW-RAVTDRLAELLE-KNRGL 212
Query: 287 LQCLKTDATLADLVE----DVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPS 342
LQ ++TD L+++ E SV+ R K +S +K+ G E+++D+ G RV++
Sbjct: 213 LQKIETD--LSEIFEKNGIKASVKSRQKKPWSVFRKMETKGLSFEQLSDIFGFRVMVDTV 270
Query: 343 SNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTR 402
+ CY +I + W +P R KDYI+ PK N YRS+H + G +R
Sbjct: 271 QD-----------CYRALGLIHTTWSMVPGRFKDYISTPKQNDYRSIHTTI----IGPSR 315
Query: 403 PLMEIQIRTEEMDMLAVNGTASHAFYK--GGLTNPEE 437
+E+QIRT EMD +A G A+H+ YK G NP +
Sbjct: 316 QRIELQIRTREMDEIAEFGVAAHSIYKDRGSANNPHK 352
>sp|Q2YN11|RSH_BRUA2 GTP pyrophosphokinase rsh OS=Brucella abortus (strain 2308) GN=rsh
PE=3 SV=1
Length = 750
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 167/337 (49%), Gaps = 39/337 (11%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+ L VA +L D+ +D I+ LL +E + Q++ G L+ ++K
Sbjct: 46 FSHPLEVAAILTDMHLDEATIAIALLHDTIEDTTATRQEIDQLFGPEIGKLVEGLTKLK- 104
Query: 170 NVNLKLQVLDDETAAA--LRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISL 226
KL ++ + A LRK L D+R L++ LA RL MR L + ++L I+
Sbjct: 105 ----KLDLVSKKAVQAENLRKLLLAISEDVRVLLVKLADRLHNMRTLGVMREDKRLRIAE 160
Query: 227 EVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQL 286
E M I+APLA + + ELE+L+FRY+ P D W R+ L++ L
Sbjct: 161 ETMDIYAPLAGRMGMQDMREELEELAFRYINP------DAW-RAVTDRLAELLE-KNRGL 212
Query: 287 LQCLKTDATLADLVE----DVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPS 342
LQ ++TD L+++ E SV+ R K +S +K+ G E+++D+ G RV++
Sbjct: 213 LQKIETD--LSEIFEKNGIKASVKSRQKKPWSVFRKMETKGLSFEQLSDIFGFRVMVDTV 270
Query: 343 SNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTR 402
+ CY +I + W +P R KDYI+ PK N YRS+H + G +R
Sbjct: 271 QD-----------CYRALGLIHTTWSMVPGRFKDYISTPKQNDYRSIHTTI----IGPSR 315
Query: 403 PLMEIQIRTEEMDMLAVNGTASHAFYK--GGLTNPEE 437
+E+QIRT EMD +A G A+H+ YK G NP +
Sbjct: 316 QRIELQIRTREMDEIAEFGVAAHSIYKDRGSANNPHK 352
>sp|P52560|RELA_STRCO GTP pyrophosphokinase OS=Streptomyces coelicolor (strain ATCC
BAA-471 / A3(2) / M145) GN=relA PE=3 SV=1
Length = 847
Score = 139 bits (349), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 159/321 (49%), Gaps = 27/321 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+V +LA+L MD + AGLL VE ++ +R G L+ ++
Sbjct: 150 ITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLEDLRRDFGDVVTLLVDGVTKLD- 208
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
K++ + A +RK + D R L++ LA RL MR + YL R +Q + E
Sbjct: 209 ----KVKFGEAAQAETVRKMVVAMAKDPRVLVIKLADRLHNMRTMRYLKREKQEKKARET 264
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+APLAH + N + +ELEDL+F L+P Y + + + + +++ Q
Sbjct: 265 LEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEIVRLVAERAPKRDEYLAVVTDEVQQ 324
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNT 348
L+ A +V GR K YS +K++ GR E+ D++G+RV LV+T
Sbjct: 325 DLRAARIKA------TVTGRPKHYYSVYQKMIVRGRDFAEIYDLVGIRV-------LVDT 371
Query: 349 SEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQ 408
R CY + + W +P R KDYIA PK N Y+SLH V + GK +E+Q
Sbjct: 372 V----RDCYAALGTVHARWNPVPGRFKDYIAMPKFNMYQSLHTTV-IGPGGKP---VELQ 423
Query: 409 IRTEEMDMLAVNGTASHAFYK 429
IRT +M A G A+H YK
Sbjct: 424 IRTFDMHRRAEYGIAAHWKYK 444
>sp|P66015|RELA_MYCBO Probable GTP pyrophosphokinase OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=relA PE=3 SV=1
Length = 790
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 166/339 (48%), Gaps = 34/339 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LA+L MD + A LL VE G +++ + + G HL V
Sbjct: 106 ITHPLAVANILAELGMDTTTLVAALLHDTVEDTGYTLEALTEEFGEEVGHL------VDG 159
Query: 170 NVNLKLQVLDDETAA-ALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLE 227
L VL +RK D R L++ +A RL MR + +LP +Q + E
Sbjct: 160 VTKLDRVVLGSAAEGETIRKMITAMARDPRVLVIKVADRLHNMRTMRFLPPEKQARKARE 219
Query: 228 VMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLL 287
+++ APLAH + + +ELEDLSF L P Y + + G P D Y ++
Sbjct: 220 TLEVIAPLAHRLGMASVKWELEDLSFAILHPKKYEEIVRLV----AGRAPSRDTYLAKVR 275
Query: 288 QCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVN 347
+ T + + +V+GR K +S +K++ GR ++++D++G+R++
Sbjct: 276 AEIVNTLTASKI--KATVEGRPKHYWSIYQKMIVKGRDFDDIHDLVGVRIL--------- 324
Query: 348 TSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEI 407
E+ R CY ++ SLW+ M R KDYIA+P+ Y+SLH V V GK PL E+
Sbjct: 325 CDEI--RDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTV-VGPEGK--PL-EV 378
Query: 408 QIRTEEMDMLAVNGTASHAFYK-----GGLTNPEEAKRL 441
QIRT +M A G A+H YK G+ +P A +
Sbjct: 379 QIRTRDMHRTAEYGIAAHWRYKEAKGRNGVLHPHAAAEI 417
>sp|P66014|RELA_MYCTU Bifunctional (p)ppGpp synthase/hydrolase relA OS=Mycobacterium
tuberculosis GN=relA PE=1 SV=2
Length = 738
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 166/339 (48%), Gaps = 34/339 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LA+L MD + A LL VE G +++ + + G HL V
Sbjct: 54 ITHPLAVANILAELGMDTTTLVAALLHDTVEDTGYTLEALTEEFGEEVGHL------VDG 107
Query: 170 NVNLKLQVLDDETAA-ALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLE 227
L VL +RK D R L++ +A RL MR + +LP +Q + E
Sbjct: 108 VTKLDRVVLGSAAEGETIRKMITAMARDPRVLVIKVADRLHNMRTMRFLPPEKQARKARE 167
Query: 228 VMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLL 287
+++ APLAH + + +ELEDLSF L P Y + + G P D Y ++
Sbjct: 168 TLEVIAPLAHRLGMASVKWELEDLSFAILHPKKYEEIVRLV----AGRAPSRDTYLAKVR 223
Query: 288 QCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVN 347
+ T + + +V+GR K +S +K++ GR ++++D++G+R++
Sbjct: 224 AEIVNTLTASKI--KATVEGRPKHYWSIYQKMIVKGRDFDDIHDLVGVRIL--------- 272
Query: 348 TSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEI 407
E+ R CY ++ SLW+ M R KDYIA+P+ Y+SLH V V GK PL E+
Sbjct: 273 CDEI--RDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTV-VGPEGK--PL-EV 326
Query: 408 QIRTEEMDMLAVNGTASHAFYK-----GGLTNPEEAKRL 441
QIRT +M A G A+H YK G+ +P A +
Sbjct: 327 QIRTRDMHRTAEYGIAAHWRYKEAKGRNGVLHPHAAAEI 365
>sp|Q49640|RELA_MYCLE Probable GTP pyrophosphokinase OS=Mycobacterium leprae (strain TN)
GN=relA PE=3 SV=1
Length = 787
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/339 (31%), Positives = 166/339 (48%), Gaps = 34/339 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA +LA+L MD + A LL VE G +++ + + G HL V
Sbjct: 103 ITHPLAVANILAELGMDITTLVAALLHDTVEDTGYTLEALSEEFGDEVGHL------VDG 156
Query: 170 NVNLKLQVLDDETAA-ALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLE 227
L VL +RK D R L++ +A RL MR + +LP +Q + E
Sbjct: 157 VTKLDRVVLGSAAEGETIRKMITAMARDPRVLVIKVADRLHNMRTMRFLPPEKQARKARE 216
Query: 228 VMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLL 287
+++ APLAH + + +ELEDLSF L P Y + + G P D Y ++
Sbjct: 217 TLEVIAPLAHRLGMASVKWELEDLSFAILHPKKYEEIVRLV----AGRAPSRDTYLAKVR 272
Query: 288 QCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVN 347
+ +TL +V+GR K +S +K++ GR ++++D++G+R++
Sbjct: 273 A--EIISTLGASKIKATVEGRPKHYWSIYQKMIVKGRDFDDIHDLVGIRIL--------- 321
Query: 348 TSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEI 407
E+ R CY ++ SLW+ M R KDYIA+P+ Y+SLH V V GK PL E+
Sbjct: 322 CDEI--RDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTV-VGPEGK--PL-EV 375
Query: 408 QIRTEEMDMLAVNGTASHAFYK-----GGLTNPEEAKRL 441
QIRT +M A G A+H YK G+ +P A +
Sbjct: 376 QIRTRDMHRTAEYGIAAHWRYKEAKGRNGVLHPHAAAEI 414
>sp|P0AG26|SPOT_SHIFL Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
OS=Shigella flexneri GN=spoT PE=3 SV=1
Length = 702
Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 165/324 (50%), Gaps = 31/324 (9%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++VA +LA++++D E + A LL V+E + Q + G A L+ ++
Sbjct: 46 ITHPVAVACILAEMKLDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGVSKLD- 104
Query: 170 NVNLKLQVLDDETAAA--LRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISL 226
KL+ D + A A RK + DIR +++ LA R MR L L ++ I+
Sbjct: 105 ----KLKFRDKKEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIAR 160
Query: 227 EVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQL 286
E ++I++PLAH + +++ ELE+L F L+P Y + +++ K +I +++
Sbjct: 161 ETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVIKEVVKAARGNRKEMI----QKI 216
Query: 287 LQCLKTDATLADLVEDVSVQGRYKSRYSTMKKL-LKDGRIPEEVNDVLGLRVIIKPSSNL 345
L + + L + V GR K YS K+ LK+ R + D+ RVI+ S
Sbjct: 217 LS--EIEGRLQEAGIPCRVSGREKHLYSIYCKMVLKEQRF-HSIMDIYAFRVIVNDSDT- 272
Query: 346 VNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLM 405
CY + SL+K P R KDYIA PKANGY+SLH ++ + +G +
Sbjct: 273 ----------CYRVLGQMHSLYKPRPGRVKDYIAIPKANGYQSLHTSM-IGPHGVP---V 318
Query: 406 EIQIRTEEMDMLAVNGTASHAFYK 429
E+QIRTE+MD +A G A+H YK
Sbjct: 319 EVQIRTEDMDQMAEMGVAAHWAYK 342
>sp|P0AG24|SPOT_ECOLI Bifunctional (p)ppGpp synthase/hydrolase SpoT OS=Escherichia coli
(strain K12) GN=spoT PE=1 SV=1
Length = 702
Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 165/324 (50%), Gaps = 31/324 (9%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++VA +LA++++D E + A LL V+E + Q + G A L+ ++
Sbjct: 46 ITHPVAVACILAEMKLDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGVSKLD- 104
Query: 170 NVNLKLQVLDDETAAA--LRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISL 226
KL+ D + A A RK + DIR +++ LA R MR L L ++ I+
Sbjct: 105 ----KLKFRDKKEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIAR 160
Query: 227 EVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQL 286
E ++I++PLAH + +++ ELE+L F L+P Y + +++ K +I +++
Sbjct: 161 ETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVIKEVVKAARGNRKEMI----QKI 216
Query: 287 LQCLKTDATLADLVEDVSVQGRYKSRYSTMKKL-LKDGRIPEEVNDVLGLRVIIKPSSNL 345
L + + L + V GR K YS K+ LK+ R + D+ RVI+ S
Sbjct: 217 LS--EIEGRLQEAGIPCRVSGREKHLYSIYCKMVLKEQRF-HSIMDIYAFRVIVNDSDT- 272
Query: 346 VNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLM 405
CY + SL+K P R KDYIA PKANGY+SLH ++ + +G +
Sbjct: 273 ----------CYRVLGQMHSLYKPRPGRVKDYIAIPKANGYQSLHTSM-IGPHGVP---V 318
Query: 406 EIQIRTEEMDMLAVNGTASHAFYK 429
E+QIRTE+MD +A G A+H YK
Sbjct: 319 EVQIRTEDMDQMAEMGVAAHWAYK 342
>sp|P0AG25|SPOT_ECO57 Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
OS=Escherichia coli O157:H7 GN=spoT PE=3 SV=1
Length = 702
Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 165/324 (50%), Gaps = 31/324 (9%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++VA +LA++++D E + A LL V+E + Q + G A L+ ++
Sbjct: 46 ITHPVAVACILAEMKLDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGVSKLD- 104
Query: 170 NVNLKLQVLDDETAAA--LRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISL 226
KL+ D + A A RK + DIR +++ LA R MR L L ++ I+
Sbjct: 105 ----KLKFRDKKEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIAR 160
Query: 227 EVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQL 286
E ++I++PLAH + +++ ELE+L F L+P Y + +++ K +I +++
Sbjct: 161 ETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVIKEVVKAARGNRKEMI----QKI 216
Query: 287 LQCLKTDATLADLVEDVSVQGRYKSRYSTMKKL-LKDGRIPEEVNDVLGLRVIIKPSSNL 345
L + + L + V GR K YS K+ LK+ R + D+ RVI+ S
Sbjct: 217 LS--EIEGRLQEAGIPCRVSGREKHLYSIYCKMVLKEQRF-HSIMDIYAFRVIVNDSDT- 272
Query: 346 VNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLM 405
CY + SL+K P R KDYIA PKANGY+SLH ++ + +G +
Sbjct: 273 ----------CYRVLGQMHSLYKPRPGRVKDYIAIPKANGYQSLHTSM-IGPHGVP---V 318
Query: 406 EIQIRTEEMDMLAVNGTASHAFYK 429
E+QIRTE+MD +A G A+H YK
Sbjct: 319 EVQIRTEDMDQMAEMGVAAHWAYK 342
>sp|O85709|RELA_STRAT GTP pyrophosphokinase OS=Streptomyces antibioticus GN=relA PE=3
SV=1
Length = 841
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/325 (33%), Positives = 162/325 (49%), Gaps = 35/325 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+V +LA+L MD + AGLL E + +R G L+ ++
Sbjct: 147 ITHPLAVTTILAELGMDPATLMAGLLHDSREDTEYGLDDLRRDFGDVVGLLVDGVTKLD- 205
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
K++ + A +RK + D R L++ LA RL MR + YL R +Q + E
Sbjct: 206 ----KVKFGEAAQAETVRKMVVAMAKDPRVLVIKLADRLHNMRTMRYLKREKQEKKARET 261
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLR-SHETGSKPLIDIYKEQLL 287
++I+APLAH + N + +ELEDL+F L+P Y D +R E K +++ L
Sbjct: 262 LEIYAPLAHRLGMNTIKWELEDLAFAILYPKMY---DEIVRLVAERAPK------RDEYL 312
Query: 288 QCLKTDATLADLVE---DVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSN 344
+ TD +DL +V GR K YS +K++ GR E+ D++G+RV
Sbjct: 313 -AIVTDEVQSDLRARRIKATVTGRPKHYYSVYQKIIVRGRDFAEIYDLVGIRV------- 364
Query: 345 LVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPL 404
LV+T R CY + + W +P R KDYIA PK N Y+SLH V + NGK
Sbjct: 365 LVDTV----RDCYAALGTVHARWNPVPGRFKDYIAMPKFNMYQSLHTTV-IGPNGKP--- 416
Query: 405 MEIQIRTEEMDMLAVNGTASHAFYK 429
+E+QIRT +M A G A+H YK
Sbjct: 417 VELQIRTFDMHRRAEYGIAAHWKYK 441
>sp|Q9KNM2|SPOT_VIBCH Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Vibrio
cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba
N16961) GN=spoT PE=1 SV=1
Length = 705
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 167/333 (50%), Gaps = 30/333 (9%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
++VA +LA++++D E + A LL V+E V+ + + G A L+ ++ L
Sbjct: 50 VAVARILAEMRLDLETLQAALLHDVIEDCDVTKEDLDAHFGSSVAELVDGVSKLDK---L 106
Query: 174 KLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVMKIH 232
K + + A RK L DIR +++ LA R MR L L ++ I+ E ++I+
Sbjct: 107 KFRDRKEAQAENFRKMVLAMVQDIRVILIKLADRTPNMRTLGALRPDKKRRIARETLEIY 166
Query: 233 APLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKT 292
APLAH + + + ELE+L F L+P Y + +++ K +I ++
Sbjct: 167 APLAHRLGIHNIKTELEELGFEALYPNRYRVLKEVVKAARGNRKEMIQRIHSEI------ 220
Query: 293 DATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
+ L ++ V GR K+ +S K+ + + D+ R++ V+T++
Sbjct: 221 EGRLQEVGLPARVVGREKNLFSIYNKMKTKEQRFHTIMDIYAFRIV-------VDTADT- 272
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
CY + SL+K P R KDYIA PKANGY+SLH ++ V +G +E+QIRTE
Sbjct: 273 ---CYRVLGQVHSLYKPRPARMKDYIAVPKANGYQSLHTSM-VGPHGVP---VEVQIRTE 325
Query: 413 EMDMLAVNGTASHAFYK-----GGLTNPEEAKR 440
+MD +A G A+H YK GG T +A+R
Sbjct: 326 DMDQMADKGVAAHWSYKANSERGGTTAQIKAQR 358
>sp|P0AG23|RELA_SHIFL GTP pyrophosphokinase OS=Shigella flexneri GN=relA PE=3 SV=1
Length = 744
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 159/337 (47%), Gaps = 25/337 (7%)
Query: 97 LQSLPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIG 156
LQ PD+ L + + + +L+ L MD + + A LL + ++ VS +R+ +G
Sbjct: 43 LQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKS 102
Query: 157 TAHLLHESLRVKNNVNLKLQVLDD---ETAAALRKFCLTYYD-IRALILDLAIRLDMMRH 212
+L+H + LK D E +R+ L D R +++ LA R+ +R
Sbjct: 103 VVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLRE 162
Query: 213 LDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHE 272
+ P ++++ + E I+APLA+ + L +ELED FRYL P Y + L
Sbjct: 163 VKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERR 222
Query: 273 TGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDV 332
+ I+ + L +K + A+ V GR K YS +K+ K +E+ DV
Sbjct: 223 LDREHYIEEFVGHLRAEMKAEGVKAE------VYGRPKHIYSIWRKMQKKNLAFDELFDV 276
Query: 333 LGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMA 392
+R++ + + CY I+ + ++ +P DY+A PK NGY+S+H
Sbjct: 277 RAVRIVAERLQD-----------CYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTV 325
Query: 393 VDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYK 429
V + GKT +EIQIRT++M A G A+H YK
Sbjct: 326 V-LGPGGKT---VEIQIRTKQMHEDAELGVAAHWKYK 358
>sp|P0AG20|RELA_ECOLI GTP pyrophosphokinase OS=Escherichia coli (strain K12) GN=relA PE=1
SV=1
Length = 744
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 159/337 (47%), Gaps = 25/337 (7%)
Query: 97 LQSLPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIG 156
LQ PD+ L + + + +L+ L MD + + A LL + ++ VS +R+ +G
Sbjct: 43 LQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKS 102
Query: 157 TAHLLHESLRVKNNVNLKLQVLDD---ETAAALRKFCLTYYD-IRALILDLAIRLDMMRH 212
+L+H + LK D E +R+ L D R +++ LA R+ +R
Sbjct: 103 VVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLRE 162
Query: 213 LDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHE 272
+ P ++++ + E I+APLA+ + L +ELED FRYL P Y + L
Sbjct: 163 VKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERR 222
Query: 273 TGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDV 332
+ I+ + L +K + A+ V GR K YS +K+ K +E+ DV
Sbjct: 223 LDREHYIEEFVGHLRAEMKAEGVKAE------VYGRPKHIYSIWRKMQKKNLAFDELFDV 276
Query: 333 LGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMA 392
+R++ + + CY I+ + ++ +P DY+A PK NGY+S+H
Sbjct: 277 RAVRIVAERLQD-----------CYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTV 325
Query: 393 VDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYK 429
V + GKT +EIQIRT++M A G A+H YK
Sbjct: 326 V-LGPGGKT---VEIQIRTKQMHEDAELGVAAHWKYK 358
>sp|P0AG21|RELA_ECOL6 GTP pyrophosphokinase OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=relA PE=3 SV=1
Length = 744
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 159/337 (47%), Gaps = 25/337 (7%)
Query: 97 LQSLPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIG 156
LQ PD+ L + + + +L+ L MD + + A LL + ++ VS +R+ +G
Sbjct: 43 LQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKS 102
Query: 157 TAHLLHESLRVKNNVNLKLQVLDD---ETAAALRKFCLTYYD-IRALILDLAIRLDMMRH 212
+L+H + LK D E +R+ L D R +++ LA R+ +R
Sbjct: 103 VVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLRE 162
Query: 213 LDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHE 272
+ P ++++ + E I+APLA+ + L +ELED FRYL P Y + L
Sbjct: 163 VKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERR 222
Query: 273 TGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDV 332
+ I+ + L +K + A+ V GR K YS +K+ K +E+ DV
Sbjct: 223 LDREHYIEEFVGHLRAEMKAEGVKAE------VYGRPKHIYSIWRKMQKKNLAFDELFDV 276
Query: 333 LGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMA 392
+R++ + + CY I+ + ++ +P DY+A PK NGY+S+H
Sbjct: 277 RAVRIVAERLQD-----------CYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTV 325
Query: 393 VDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYK 429
V + GKT +EIQIRT++M A G A+H YK
Sbjct: 326 V-LGPGGKT---VEIQIRTKQMHEDAELGVAAHWKYK 358
>sp|P0AG22|RELA_ECO57 GTP pyrophosphokinase OS=Escherichia coli O157:H7 GN=relA PE=3 SV=1
Length = 744
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 159/337 (47%), Gaps = 25/337 (7%)
Query: 97 LQSLPLSPDSRSPLTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIG 156
LQ PD+ L + + + +L+ L MD + + A LL + ++ VS +R+ +G
Sbjct: 43 LQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKS 102
Query: 157 TAHLLHESLRVKNNVNLKLQVLDD---ETAAALRKFCLTYYD-IRALILDLAIRLDMMRH 212
+L+H + LK D E +R+ L D R +++ LA R+ +R
Sbjct: 103 VVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLRE 162
Query: 213 LDYLPRYQQLMISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHE 272
+ P ++++ + E I+APLA+ + L +ELED FRYL P Y + L
Sbjct: 163 VKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERR 222
Query: 273 TGSKPLIDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDV 332
+ I+ + L +K + A+ V GR K YS +K+ K +E+ DV
Sbjct: 223 LDREHYIEEFVGHLRAEMKAEGVKAE------VYGRPKHIYSIWRKMQKKNLAFDELFDV 276
Query: 333 LGLRVIIKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMA 392
+R++ + + CY I+ + ++ +P DY+A PK NGY+S+H
Sbjct: 277 RAVRIVAERLQD-----------CYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTV 325
Query: 393 VDVSDNGKTRPLMEIQIRTEEMDMLAVNGTASHAFYK 429
V + GKT +EIQIRT++M A G A+H YK
Sbjct: 326 V-LGPGGKT---VEIQIRTKQMHEDAELGVAAHWKYK 358
>sp|P43811|SPOT_HAEIN Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121
/ KW20 / Rd) GN=spoT PE=3 SV=1
Length = 677
Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 154/322 (47%), Gaps = 27/322 (8%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T ++VA ++A L +D E + A LL V+E + +Q+++ G A ++ ++
Sbjct: 19 ITHPVAVASIIAQLHLDHEAVMAALLHDVIEDTPYTEEQLKEEFGASVAEIVDGVSKLDK 78
Query: 170 NVNLKLQVLDDETAAALRKFCLTYY-DIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
LK + + RK L DIR +++ LA R MR L L ++ I+ E
Sbjct: 79 ---LKFRTRQEAQVENFRKMILAMTRDIRVVLIKLADRTHNMRTLGSLRPDKRRRIAKET 135
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQ 288
++I+ PLAH + ++ ELEDLSF+ + P Y + + + + LI+ +++
Sbjct: 136 LEIYCPLAHRLGIEHIKNELEDLSFQAMHPHRYEVLKKLVDVARSNRQDLIERISQEIKV 195
Query: 289 CLKTDATLADLVEDVSVQGRYKSRYSTMKKL-LKDGRIPEEVNDVLGLRVIIKPSSNLVN 347
L+ A V GR K Y +K+ +KD + D+ RVI+K +
Sbjct: 196 RLENSGIFA------RVWGREKHLYKIYQKMRIKDQEF-HSIMDIYAFRVIVKNVDD--- 245
Query: 348 TSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEI 407
CY + +L+K P R KDYIA PKANGY+SL ++ G +E+
Sbjct: 246 --------CYRVLGQMHNLYKPRPGRVKDYIAVPKANGYQSLQTSMI----GPKGVPVEV 293
Query: 408 QIRTEEMDMLAVNGTASHAFYK 429
I TE+M+ +A G +H YK
Sbjct: 294 HIHTEDMEQVAEMGITAHWVYK 315
>sp|O87331|RELA_CORGL GTP pyrophosphokinase OS=Corynebacterium glutamicum (strain ATCC
13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)
GN=relA PE=3 SV=2
Length = 760
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 159/325 (48%), Gaps = 35/325 (10%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
+T L+VA + A++ MD + A LL VE S+ + G A L+ ++
Sbjct: 78 ITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTDYSLDDLTRDFGEEVARLVDGVTKLD- 136
Query: 170 NVNLKLQVLDDETAAALRKFCLTY-YDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEV 228
K+ + A +RK + D R L++ +A RL MR + +LP +Q + +
Sbjct: 137 ----KVALGAAAEAETIRKMIVAMSQDPRVLVIKVADRLHNMRTMRFLPPEKQAKKARQT 192
Query: 229 MKIHAPLAHAVATNYLSFELEDLSFRYLFPFSY----LFVDTWLRSHETGSKPLIDIYKE 284
+++ APLAH + + +ELEDLSF L+P Y V S + K +ID
Sbjct: 193 LEVIAPLAHRLGMASVKWELEDLSFAILYPKKYEEIVRLVADRAPSRDRYLKEIID---- 248
Query: 285 QLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSN 344
Q+ L+ + A+++ GR K +S +K++ GR +++ D++G+R+++ +N
Sbjct: 249 QVTGGLRENNIAAEVL------GRPKHYWSIYQKMIVRGRDFDDIFDLVGIRILVDNVNN 302
Query: 345 LVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPL 404
CY ++ SL+ +P R KDYI+ P+ Y+SLH V + GK PL
Sbjct: 303 -----------CYAAIGVVHSLFNALPGRFKDYISAPRFGVYQSLHTTV-MGPGGK--PL 348
Query: 405 MEIQIRTEEMDMLAVNGTASHAFYK 429
E+Q RT +M A G A+H YK
Sbjct: 349 -EVQARTHDMHYNAEFGIAAHWRYK 372
>sp|P55133|RELA_PHOAS GTP pyrophosphokinase OS=Photobacterium angustum (strain S14 / CCUG
15956) GN=relA PE=3 SV=1
Length = 744
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 158/329 (48%), Gaps = 31/329 (9%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L + + +L L MDA+ + A LL +VE G S +++ GT +LH V+
Sbjct: 55 LWRGRELVEILVTLSMDADTLIAALLYPLVEGGCYSTDALKEEYS-GT--ILHLVQGVEQ 111
Query: 170 NVNL-KLQVLDDETAAA-----LRKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQL 222
+ +L+ +ETA A +R+ L+ D R +++ LA R+ +R + P +
Sbjct: 112 MCAISQLKSTAEETAQAAQVDNIRRMLLSMVDDFRCVVIKLAERICNLREVKDQPDEVRR 171
Query: 223 MISLEVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIY 282
+ E I+APLA+ + L +E+ED +FRY P +Y + L + I +
Sbjct: 172 AAAQECANIYAPLANRLGIGQLKWEIEDYAFRYQHPDTYKQIAKQLSERRIDREDYITHF 231
Query: 283 KEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPS 342
+ L +K A+ VQGR K YS +K+ K +E+ DV +R++ +
Sbjct: 232 VDDLSDAMKASNIRAE------VQGRPKHIYSIWRKMQKKSLEFDELFDVRAVRIVAEEL 285
Query: 343 SNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTR 402
+ CY ++ + ++ +P DY+A PK NGY+S+H V + GKT
Sbjct: 286 QD-----------CYAALGVVHTKYRHLPKEFDDYVANPKPNGYQSIHTVV-LGPEGKT- 332
Query: 403 PLMEIQIRTEEMDMLAVNGTASHAFYKGG 431
+EIQIRT++M + G A+H YK G
Sbjct: 333 --IEIQIRTKQMHEESELGVAAHWKYKEG 359
>sp|P44644|RELA_HAEIN GTP pyrophosphokinase OS=Haemophilus influenzae (strain ATCC 51907
/ DSM 11121 / KW20 / Rd) GN=relA PE=3 SV=1
Length = 743
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 154/331 (46%), Gaps = 32/331 (9%)
Query: 110 LTKALSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKN 169
L + + +L +L MDAE + +L +V + + ++++ G LL L + N
Sbjct: 59 LQSGVEMVEILHELNMDAETLLTAMLFPIVANKLTDWESLKEKFGAKITKLLKGVLEMDN 118
Query: 170 NVNLKLQVLDDETAAAL-----RKFCLTYYD-IRALILDLAIRLDMMRHLDYLPRYQQLM 223
L +A AL R+ L D R +I+ LA R+ +R ++ + +
Sbjct: 119 IRQLNAS----HSANALQVDNVRRMLLAMVDDFRCVIIKLAERITFLRDAEHRCAEEDKV 174
Query: 224 ISL-EVMKIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIY 282
+++ E I+APLA+ + L +ELED FRYL P Y + L+ + I +
Sbjct: 175 LAVKECSYIYAPLANRLGIGQLKWELEDYCFRYLHPEQYRAIAKLLQERRLDREHYIADF 234
Query: 283 KEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPS 342
+L L+ + +E V V GR K YS +K+ K + DV +R+I++
Sbjct: 235 VSELSGYLREN------IEQVEVYGRPKHIYSIWRKMQKKHLEFSGLYDVRAVRIIVQKL 288
Query: 343 SNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTR 402
+ CYT I+ + +K +P DY+A PK NGY+S+H V GK
Sbjct: 289 QD-----------CYTALGIVHTQFKHLPKEFDDYVANPKPNGYQSIHTVV----LGKGG 333
Query: 403 PLMEIQIRTEEMDMLAVNGTASHAFYKGGLT 433
+E+QIRT++M A G A+H YK G T
Sbjct: 334 KPIEVQIRTQQMHDDAELGMAAHWKYKEGNT 364
>sp|P75386|SPOT_MYCPN Probable guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
OS=Mycoplasma pneumoniae (strain ATCC 29342 / M129)
GN=spoT PE=3 SV=1
Length = 733
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 156/331 (47%), Gaps = 48/331 (14%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L AL L + MD+ + AGLL ++E V+ + G L+ + ++ +
Sbjct: 67 LRTALRLVEWNMDSNTVCAGLLHDIIEDTQVTEADLTAIFGKEITDLVVKVTKITSESKK 126
Query: 174 KLQV---LDDETAAALRKFCLT-YYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVM 229
+ Q+ +D +L ++ ++ AL+L LA RLD + +++L +Q +I+ E +
Sbjct: 127 QRQLNRKKEDLNLKSLVNIAMSSQQEVNALVLKLADRLDNISSIEFLAVEKQKIIAKETL 186
Query: 230 KIHAPLAHAVATNYLSFELEDLSFRYLFPFSY-----------LFVDTWLRSHETGSKPL 278
+++A +A + + +L DLSF+ L P ++ +F D +E G+
Sbjct: 187 ELYAKIAGRIGMYPVKTQLADLSFKVLDPKNFNNTLSKINQQKVFYD-----NEWGN--- 238
Query: 279 IDIYKEQLLQCLKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVI 338
+K+QL + L+ + + ++ R K YST +KL + +++D+ +R+I
Sbjct: 239 ---FKKQLEEMLEQNQI------EYRLESRIKGIYSTYQKLTFHEQNIAKIHDLFAIRLI 289
Query: 339 IKPSSNLVNTSEVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDN 398
+K E CY +I + + KDYIA PK N Y+S+H V +
Sbjct: 290 VK-----------SELDCYHLLGLIHLNFTVLMKHFKDYIASPKQNFYQSIHTTVRLKGL 338
Query: 399 GKTRPLMEIQIRTEEMDMLAVNGTASHAFYK 429
+EIQIRT+ MD ++ G ASH YK
Sbjct: 339 N-----VEIQIRTQRMDHVSKYGFASHWIYK 364
>sp|P47520|SPOT_MYCGE Probable guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
OS=Mycoplasma genitalium (strain ATCC 33530 / G-37 /
NCTC 10195) GN=spoT PE=3 SV=1
Length = 720
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 147/320 (45%), Gaps = 26/320 (8%)
Query: 114 LSVALLLADLQMDAEVISAGLLRQVVESGGVSIQQVRDRIGIGTAHLLHESLRVKNNVNL 173
L AL L + MD I AGLL ++E + + A L+ + ++ N
Sbjct: 54 LRTALSLVEWNMDPITICAGLLHDIIEDTDQTEANIAMIFSKEIAELVTKVTKITNESKK 113
Query: 174 KLQVLDDETAAALRKFCL----TYYDIRALILDLAIRLDMMRHLDYLPRYQQLMISLEVM 229
+ + + + L+ F + +I ++L LA RLD + +++LP +Q +I+ E +
Sbjct: 114 QRHLKNKKENLNLKSFVNIAINSQQEINVMVLKLADRLDNIASIEFLPIEKQKVIAKETL 173
Query: 230 KIHAPLAHAVATNYLSFELEDLSFRYLFPFSYLFVDTWLRSHETGSKPLIDIYKEQLLQC 289
+++A +A + + +L DLSF+ L +Y + + + D +K+QL +
Sbjct: 174 ELYAKIAGRIGMYPVKTKLADLSFKVLDLKNYDNTLSKINKQKVFYDNEWDNFKQQLKKI 233
Query: 290 LKTDATLADLVEDVSVQGRYKSRYSTMKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTS 349
L + + ++ R K YST KKL + +++D+ +R+I K
Sbjct: 234 LAQNQI------EYQLESRIKGIYSTYKKLTVHEQNISKIHDLFAIRLITK--------- 278
Query: 350 EVGERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQI 409
E CY +I + KDYIA PK N Y+S+H V + +EIQI
Sbjct: 279 --SELDCYHILGLIHLNFLIDSKYFKDYIASPKQNLYQSIHTTVRLKGLN-----VEIQI 331
Query: 410 RTEEMDMLAVNGTASHAFYK 429
RT++MD ++ G ASH YK
Sbjct: 332 RTQQMDNVSKFGLASHWIYK 351
>sp|Q4UMH6|Y381_RICFE Putative ankyrin repeat protein RF_0381 OS=Rickettsia felis (strain
ATCC VR-1525 / URRWXCal2) GN=RF_0381 PE=4 SV=1
Length = 1179
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 35/195 (17%)
Query: 240 ATNYLSFELEDLSFRYLFP------FSYLFVDTWLRSHETGSKPLIDIYKEQLLQCLKTD 293
A N L++ L+DL F+ +P Y++ WL P ID + Q +
Sbjct: 155 AHNDLAYLLQDLCFKIQYPEERNRILHYMY---WLY-------PDIDNIIHNIEQ--QFG 202
Query: 294 ATLADLVEDVSVQGRYKSRYST-MKKLLKDGRIPEEVNDVLGLRVIIKPSSNLVNTSEVG 352
L S+ R KS YS +K L+KD I +ND+L R I+
Sbjct: 203 NIFRKLNIKASLSYRIKSPYSIWIKTLVKDIHITA-LNDILAFRAIVP-----------N 250
Query: 353 ERACYTTREIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTRPLMEIQIRTE 412
++ACY ++I + + + DYI PK NGY+S+H+ + G + +E+QIR+
Sbjct: 251 KKACYDVSKLIHLHYNTITSQFVDYIRYPKNNGYQSIHLVIS----GGNKGNIELQIRST 306
Query: 413 EMDMLAVNGTASHAF 427
M G+A H +
Sbjct: 307 TMHRQTQYGSAHHTY 321
>sp|P39583|YWAC_BACSU GTP pyrophosphokinase YwaC OS=Bacillus subtilis (strain 168)
GN=ywaC PE=1 SV=1
Length = 210
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 25/156 (16%)
Query: 306 QGRYKSRYSTMKKLLKDG------RIPEEVNDVLGLRVIIKPSSNLVNTSEVGERACYTT 359
+ R KS S + KL++ G + E ++D+ G+R+I S++ N V ++ +
Sbjct: 56 KSRVKSFESIVNKLMRKGCEITTKEMKEHIHDIAGVRIICSFISDIYNVVNVLKQ--HED 113
Query: 360 REIIQSLWKEMPHRTKDYIARPKANGYRSLHMAVDVSDNGKTR---PLMEIQIRTEEMDM 416
I+ + KDYI PK NGYRSLH+ +++ N R EIQIRT MD
Sbjct: 114 LRIV---------KVKDYIQTPKPNGYRSLHLIIEMPVNLTNRVEYVKAEIQIRTIAMDF 164
Query: 417 LAVNGTASHAFYKGGLTNPEEAKRLKAIMLAAAELA 452
A + H Y N + K+L + AAE+A
Sbjct: 165 WA---SLEHKIYYK--LNNDVPKQLTDELKEAAEIA 195
>sp|O22845|CML5_ARATH Calmodulin-like protein 5 OS=Arabidopsis thaliana GN=CML5 PE=2 SV=2
Length = 215
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 474 RVFRLLDKNGDGRISIEELMEVMEELG--APGEDAREMMQLLDSNSDGSLSSDEFD 527
RVF++ DKNGDGRI+ EEL + +E LG P +D +M+ +D+N DG + DEF+
Sbjct: 68 RVFQMFDKNGDGRITKEELNDSLENLGIYIPDKDLTQMIHKIDANGDGCVDIDEFE 123
Score = 38.1 bits (87), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 468 EFDWRDRVFRLLDKNGDGRISIEELMEVMEELGAPG----EDAREMMQLLDSNSDGSLSS 523
E D +D F + D++GDG I++EEL VM LG + ++M+ +D++ DG ++
Sbjct: 141 EEDMKD-AFNVFDQDGDGFITVEELKSVMASLGLKQGKTLDGCKKMIMQVDADGDGRVNY 199
Query: 524 DEF 526
EF
Sbjct: 200 KEF 202
>sp|Q9LX27|CML4_ARATH Calmodulin-like protein 4 OS=Arabidopsis thaliana GN=CML4 PE=2 SV=1
Length = 195
Score = 55.8 bits (133), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
Query: 474 RVFRLLDKNGDGRISIEELMEVMEELG--APGEDAREMMQLLDSNSDGSLSSDEFD 527
RVF++ DKNGDGRI+ EEL + +E LG P +D +M+Q +D+N DG + +EF+
Sbjct: 54 RVFQMFDKNGDGRITKEELNDSLENLGIFMPDKDLIQMIQKMDANGDGCVDINEFE 109
Score = 40.8 bits (94), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 468 EFDWRDRVFRLLDKNGDGRISIEELMEVMEELGAPG----EDAREMMQLLDSNSDGSLSS 523
E D RD F + D++GDG I++EEL VM LG E +EM+ +D + DG ++
Sbjct: 121 EGDMRD-AFNVFDQDGDGFITVEELNSVMTSLGLKQGKTLECCKEMIMQVDEDGDGRVNY 179
Query: 524 DEF 526
EF
Sbjct: 180 KEF 182
>sp|Q9LF54|CML29_ARATH Probable calcium-binding protein CML29 OS=Arabidopsis thaliana
GN=CML29 PE=3 SV=1
Length = 83
Score = 53.1 bits (126), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 473 DRVFRLLDKNGDGRISIEELMEVMEELGA-PGEDAREMMQLLDSNSDGSLSSDEFDLF 529
DR+F+ D NGDG+IS EL E ++ LG+ +D + MM +D++ DG++S EF F
Sbjct: 11 DRIFKKFDANGDGKISAAELEEALKTLGSVTADDVKRMMAEIDTDGDGNISYQEFTDF 68
>sp|Q0DZP5|CML17_ORYSJ Probable calcium-binding protein CML17 OS=Oryza sativa subsp.
japonica GN=CML17 PE=2 SV=1
Length = 164
Score = 52.4 bits (124), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 474 RVFRLLDKNGDGRISIEELMEVMEELGAP--GEDAREMMQLLDSNSDGSLSSDEF 526
RVF L D++GDGRI+ EEL E +E LG P E+ + +D+N DG + DEF
Sbjct: 11 RVFELFDRDGDGRITREELTESLERLGMPVHREELAATIARIDANGDGCVDMDEF 65
Score = 36.6 bits (83), Expect = 0.58, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 476 FRLLDKNGDGRISIEELMEVMEELGAP----GEDAREMMQLLDSNSDGSLSSDEF 526
F + D+NGDG I+++EL V+ LG ED M+ +D + DG + EF
Sbjct: 97 FDVFDRNGDGFITVDELGAVLASLGIKQGRTAEDCGRMIGQVDRDGDGRVDFLEF 151
>sp|Q8VWY7|POLC2_TOBAC Polcalcin Nic t 2 OS=Nicotiana tabacum GN=Nict2 PE=1 SV=1
Length = 86
Score = 52.0 bits (123), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 7/67 (10%)
Query: 472 RDRVFRLLDKNGDGRISIEELMEVMEELGA-PGEDAREMMQLLDSNSDGSLSSDEFDLFQ 530
R+R+F+ D NGDG+IS EL E ++ LG+ E+ + MM +D+N DG +S FQ
Sbjct: 13 RERIFKRFDANGDGQISATELGETLQTLGSVTPEEVKYMMDEIDTNKDGFIS------FQ 66
Query: 531 KQVEFMR 537
+ +EF R
Sbjct: 67 EFIEFAR 73
>sp|Q84V36|POLC3_CHEAL Polcalcin Che a 3 OS=Chenopodium album PE=1 SV=1
Length = 86
Score = 52.0 bits (123), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 472 RDRVFRLLDKNGDGRISIEELMEVMEELGAPGED-AREMMQLLDSNSDGSLSSDEFDLFQ 530
R+R+F+ D NGDG+IS EL + ++ LG+ D R MM +D++ DG +S DEF F
Sbjct: 13 RERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDFA 72
Query: 531 K 531
+
Sbjct: 73 R 73
>sp|Q9LNE7|CML7_ARATH Calmodulin-like protein 7 OS=Arabidopsis thaliana GN=CML7 PE=2 SV=1
Length = 150
Score = 51.6 bits (122), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 474 RVFRLLDKNGDGRISIEELMEVMEELG--APGEDAREMMQLLDSNSDGSLSSDEFDLFQK 531
RVF++ DKNGDG I+ +EL E + LG P ++ +M++ +D N DG + DEF K
Sbjct: 8 RVFQMFDKNGDGTITGKELSETLRSLGIYIPDKELTQMIEKIDVNGDGCVDIDEFGELYK 67
Query: 532 QV 533
+
Sbjct: 68 TI 69
Score = 40.8 bits (94), Expect = 0.029, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 476 FRLLDKNGDGRISIEELMEVMEELGAPG----EDAREMMQLLDSNSDGSLSSDEFDLFQK 531
F + D+NGDG I+++EL V+ LG +D ++M++ +D + DG ++ EF K
Sbjct: 84 FNVFDQNGDGFITVDELKAVLSSLGLKQGKTLDDCKKMIKKVDVDGDGRVNYKEFRQMMK 143
>sp|Q0DJV6|CML18_ORYSJ Probable calcium-binding protein CML18 OS=Oryza sativa subsp.
japonica GN=CML18 PE=2 SV=1
Length = 158
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 473 DRVFRLLDKNGDGRISIEELMEVMEELGA---PGEDAREMMQLLDSNSDGSLSSDEFDLF 529
++VFR D NGDG+IS EEL V+ LGA PGE R MM +DS+ DG + EF F
Sbjct: 7 EQVFRRYDANGDGKISAEELASVLRALGAPLGPGE-VRRMMDEMDSDRDGFVDLSEFAAF 65
Query: 530 Q 530
Sbjct: 66 H 66
Score = 40.0 bits (92), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 14/90 (15%)
Query: 449 AELAALRLKDIPSTNHKGFEFDWRDR----------VFRLLDKNGDGRISIEELMEVMEE 498
+E AA P+ H G D +D+ FR+ D + +G+IS EL V+ +
Sbjct: 60 SEFAAFHCG--PTPAHGGKGGDAKDQEAASEAELREAFRMYDADSNGKISARELHRVLRQ 117
Query: 499 LGAPGE--DAREMMQLLDSNSDGSLSSDEF 526
LG D M++ +D++ DG ++ DEF
Sbjct: 118 LGDKCSVADCSRMIRSVDADGDGCVNFDEF 147
>sp|Q9SRP7|CML28_ARATH Probable calcium-binding protein CML28 OS=Arabidopsis thaliana
GN=CML28 PE=3 SV=1
Length = 83
Score = 50.4 bits (119), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 473 DRVFRLLDKNGDGRISIEELMEVMEELGA-PGEDAREMMQLLDSNSDGSLSSDEF 526
DR+F+ D NGDG+IS EL + ++ LG+ ED + MM +D++ DG +S EF
Sbjct: 11 DRIFKKFDANGDGKISAAELGDALKNLGSVTHEDIKRMMAEIDTDGDGYISYQEF 65
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 200,482,640
Number of Sequences: 539616
Number of extensions: 8332116
Number of successful extensions: 31508
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 259
Number of HSP's successfully gapped in prelim test: 366
Number of HSP's that attempted gapping in prelim test: 30040
Number of HSP's gapped (non-prelim): 1369
length of query: 576
length of database: 191,569,459
effective HSP length: 123
effective length of query: 453
effective length of database: 125,196,691
effective search space: 56714101023
effective search space used: 56714101023
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)