BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008156
(576 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FPS0|UBP27_ARATH Ubiquitin carboxyl-terminal hydrolase 27 OS=Arabidopsis thaliana
GN=UBP27 PE=2 SV=1
Length = 494
Score = 377 bits (968), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/426 (49%), Positives = 279/426 (65%), Gaps = 17/426 (3%)
Query: 26 KWVSASGLLGILGVAGFVLALKKDAKIGNLSGFSWLSEKE-NRLEKLCLVPGLQNLGNNC 84
+WVS G+LGVAGFV A ++ NL+ S +E + + LVPGLQNLGNNC
Sbjct: 25 QWVSHLSFAGLLGVAGFVFA-QQHGLFRNLNNLKLFSGREKDSGDDSFLVPGLQNLGNNC 83
Query: 85 FLNVILQALASCTCFLPFLQKVMGECE-----EPDEDLPLTVALASLLEELCLVGETRLV 139
FLNVILQALASC F FLQ V+ + E +E LPLT AL++LL+EL VG R V
Sbjct: 84 FLNVILQALASCKDFRSFLQWVLEDARGSLAGEQEEQLPLTFALSALLQELGTVGSRRSV 143
Query: 140 LSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYSPNESS-LVDAFEAAS 198
+P+KVM+ + Y +NFNLTSQQDA EA LHL+SSL+EE + Y P++SS L D + +
Sbjct: 144 SNPRKVMVTLTDYAKNFNLTSQQDAAEALLHLISSLQEEIVVCYRPSQSSNLSDILFSRN 203
Query: 199 CRILSLKRR-EVQSEQKRWRKHFFGPFDGILGSILTCQSCLSQISLDYQFFHSLPLSPVL 257
R+L+ E KRW KH GPFDGILGS L C++C SQISL++QFFH+LPLSP+L
Sbjct: 204 LRMLAPSEGLHGLMELKRWHKHLRGPFDGILGSTLMCRTCSSQISLEFQFFHTLPLSPLL 263
Query: 258 DSGS-TIPFGCTLEDCLKQFLTAEQLENYHCSHCWHIAAIKYLSITEANEMEIEELRRCS 316
G I GCTLE CLK+FL E++ENY C CWH AA+KYLS+ A E EIE+LR C
Sbjct: 264 HHGGYNIMSGCTLEHCLKKFLNTEKVENYFCYRCWHGAALKYLSVIGAAETEIEKLRSCG 323
Query: 317 AQDSCNCRSRLHLETLPWSNKFSHTLKKLSISHCPQILCIHLQRVSINEMGELVKIWGHI 376
+D C+C++ LHL+ +PWSN +SH LK+L I+ P++LCI +QR S N M E K+ GHI
Sbjct: 324 GEDQCDCKTSLHLQRMPWSNSYSHILKQLIIARFPKLLCIQVQRASFN-MFEEFKLSGHI 382
Query: 377 AFPLILDLFPFVKSGVGINDLDESWQRGQAKVLNERPSSSLNHVNRKYDAKVLNSIYGLT 436
AFPL+L+L F S +G+N ++E R + ++P +S NH Y + +G T
Sbjct: 383 AFPLVLNLSLFTPSSIGVN-IEE---RIEMSSEYQKPEASKNH--GMYRLVTVVEHFGRT 436
Query: 437 GKNNHT 442
G ++T
Sbjct: 437 GSGHYT 442
Score = 92.8 bits (229), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 70/111 (63%), Gaps = 7/111 (6%)
Query: 463 SILPPTQSGSNVRGRDIQMQPDDEVIGSSQLCQPNTYLYRLASVVEHFGRVGSGHYTVYR 522
S+ P+ G N+ R I+M + + +S+ N +YRL +VVEHFGR GSGHYTVYR
Sbjct: 391 SLFTPSSIGVNIEER-IEMSSEYQKPEASK----NHGMYRLVTVVEHFGRTGSGHYTVYR 445
Query: 523 SVRVESHEENPNEHFETPLTHWFCISDSQVYSVSVNDVLAAEASLLFYERI 573
SVRV S + E WF ISDS+V VS +DVL AEASLLFYER+
Sbjct: 446 SVRVFS--QEEEEEDCDEDLSWFSISDSEVCRVSESDVLGAEASLLFYERL 494
>sp|A4QNN3|UBP30_XENTR Ubiquitin carboxyl-terminal hydrolase 30 OS=Xenopus tropicalis
GN=usp30 PE=2 SV=1
Length = 519
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 142/526 (26%), Positives = 220/526 (41%), Gaps = 103/526 (19%)
Query: 60 WLSEKENRLEKLCLVPGLQNLGNNCFLNVILQALASCTCFLPFLQKVMGECEEPD---ED 116
W + + + LVPGL NLGN CF+N +LQ LASC F+ +L + + + E
Sbjct: 70 WGPISDRKKYRKGLVPGLLNLGNTCFMNSLLQGLASCPSFIRWLADFTSKYRQENNTTEH 129
Query: 117 LPLTVALASLLEELC-LVGETRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSL 175
L+V L LL+ LC G VL ++ + + + +QDA E F L SSL
Sbjct: 130 QHLSVTLLHLLKALCNQEGTEDEVLDASPLLEVLRAHRWQISSFEEQDAHELFHVLTSSL 189
Query: 176 REEFLESYSPNESSLVD----AFEAASCRILSLKRR-EVQSEQKRWRKHFFGPFDGILGS 230
+E P+ + L D F R + + + + +W+ PF G L S
Sbjct: 190 EDE--RDRRPHVTHLFDLDSLEFPLEPQRQIHCRTQVPIYPIPSQWKSQH--PFHGRLTS 245
Query: 231 ILTCQSCLSQISLDYQFFHSLPLS-PVLDSGSTIPFGCTLEDCLKQFLTAEQLENYHCSH 289
+ C+ C Q + Y F SL LS PV G I TL+ CL+ F++ E +++ C +
Sbjct: 246 NMVCKHCQHQSPMRYDTFDSLSLSIPVATWGHPI----TLDQCLQHFISTESVKDVVCEN 301
Query: 290 CWHIAAIKYLSITEANEMEIEELRRCSAQDSCNCRSRLHLETLPWSNKFSHTLKKLSISH 349
C I A + N +E N+ + +K+L +
Sbjct: 302 CTKIHAAQI-----PNSQSVE-------------------------NRKTTFVKQLKLGK 331
Query: 350 CPQILCIHLQRVSINEMGELVKIWGHIAFP--LILDLFPFVKSGVGINDLDESWQRGQAK 407
PQ LCIHLQR+S + G +K H+ F L +D F + SG
Sbjct: 332 LPQCLCIHLQRLSWSNQGSPLKRNEHVQFSEFLAMDRFKYRISGCST------------- 378
Query: 408 VLNERPSSSLNHVNRKYDAKVLNSIYGLTGKNNHTKALGVDELGCTAHEKEFRGESILPP 467
+++P+ NH++ A + G G + ++ T++ I PP
Sbjct: 379 --SKQPA---NHLS----AAEQETTDGKEGGAQNPTMPFLNGACSTSY--------ISPP 421
Query: 468 TQSGSNVRGRDIQMQPDDEVIGSSQLCQPNTYLYRLASVVEHFGRVGSGHYTVYRSVRVE 527
S + + E SS YL+RL +VV H G + SGH+ YR
Sbjct: 422 FTSP---------LPTNPEWTSSS-------YLFRLMAVVVHHGDMHSGHFVTYRRSPAA 465
Query: 528 SHEENPNEHFETPLTHWFCISDSQVYSVSVNDVLAAEASLLFYERI 573
+++ ++ W ISD V + +VL++ A LLFYERI
Sbjct: 466 KNQKLTSQ-------QWLWISDDTVRRTNFQEVLSSSAYLLFYERI 504
>sp|Q70CQ3|UBP30_HUMAN Ubiquitin carboxyl-terminal hydrolase 30 OS=Homo sapiens GN=USP30
PE=1 SV=1
Length = 517
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 140/532 (26%), Positives = 213/532 (40%), Gaps = 98/532 (18%)
Query: 60 WLSEKENRLEKLCLVPGLQNLGNNCFLNVILQALASCTCFLPFLQKVMGEC-----EEPD 114
W E + + LVPGL NLGN CF+N +LQ L++C F+ +L++ + E P
Sbjct: 53 WGPITERKKRRKGLVPGLVNLGNTCFMNSLLQGLSACPAFIRWLEEFTSQYSRDQKEPPS 112
Query: 115 EDLPLTVALASLLEELCLVGETRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSS 174
L L C VL ++ + +Y + +QDA E F + SS
Sbjct: 113 HQYLSLTLLHLLKALSCQEVTDDEVLDASCLLDVLRMYRWQISSFEEQDAHELFHVITSS 172
Query: 175 LREEFLESYSPNESSLVDAF------EAASCRILSLKRREVQSEQKRWRKHFFGPFDGIL 228
L +E P + L D E +I R W+ PF G L
Sbjct: 173 LEDE--RDRQPRVTHLFDVHSLEQQSEITPKQITCRTRGSPHPTSNHWKSQH--PFHGRL 228
Query: 229 GSILTCQSCLSQISLDYQFFHSLPLS-PVLDSGSTIPFGCTLEDCLKQFLTAEQLENYHC 287
S + C+ C Q + + F SL LS P G + TL+ CL F+++E + + C
Sbjct: 229 TSNMVCKHCEHQSPVRFDTFDSLSLSIPAATWGHPL----TLDHCLHHFISSESVRDVVC 284
Query: 288 SHCWHIAAIKYLSITEANEMEIEELRRCSAQDSCNCRSRLHLETLPWSNKFSHTLKKLSI 347
+C I A L N ++E R + +K+L +
Sbjct: 285 DNCTKIEAKGTL-----NGEKVEHQR-------------------------TTFVKQLKL 314
Query: 348 SHCPQILCIHLQRVSINEMGELVKIWGHIAFP--LILDLFPFVKSGVGINDLDESWQRGQ 405
PQ LCIHLQR+S + G +K H+ F L++D++ +
Sbjct: 315 GKLPQCLCIHLQRLSWSSHGTPLKRHEHVQFNEFLMMDIYKY------------------ 356
Query: 406 AKVLNERPSSSLNHVNRKYDAKVLNSIYGLTGKNNHTKALGVDELGCTAHEKEFRG---E 462
+L +PS N K + ++ G T L ++ G + G
Sbjct: 357 -HLLGHKPSQH----NPKLNKNPGPTLELQDGPGAPTPVL--NQPGAPKTQIFMNGACSP 409
Query: 463 SILPPTQSGSNVRGRDIQMQPDDEVIGSSQLCQPNTYLYRLASVVEHFGRVGSGHYTVYR 522
S+LP + S + + PD SS TYL+RL +VV H G + SGH+ YR
Sbjct: 410 SLLP---TLSAPMPFPLPVVPD---YSSS------TYLFRLMAVVVHHGDMHSGHFVTYR 457
Query: 523 SVRVESHEENPNEHFETPLTHWFCISDSQVYSVSVNDVLAAEASLLFYERII 574
R NP + W +SD V S+ +VL++ A LLFYER++
Sbjct: 458 --RSPPSARNP----LSTSNQWLWVSDDTVRKASLQEVLSSSAYLLFYERVL 503
>sp|Q3UN04|UBP30_MOUSE Ubiquitin carboxyl-terminal hydrolase 30 OS=Mus musculus GN=Usp30
PE=2 SV=1
Length = 517
Score = 96.3 bits (238), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 142/343 (41%), Gaps = 54/343 (15%)
Query: 60 WLSEKENRLEKLCLVPGLQNLGNNCFLNVILQALASCTCFLPFLQKVMGECEEPDEDLPL 119
W E + + LVPGL NLGN CF+N +LQ L++C F+ +L++ + D+ P
Sbjct: 53 WGPITERKKRRKGLVPGLVNLGNTCFMNSLLQGLSACPAFVKWLEEFTTQYSR-DQQGPH 111
Query: 120 T------VALASLLEELCLVGETRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMS 173
T L L C VL ++ + +Y + +QDA E F + S
Sbjct: 112 THQCLSLTLLNLLKALSCQEVTEDEVLDASCLLDVLRMYRWQISSFEEQDAHELFHVITS 171
Query: 174 SLREEFLESYSPNESSLVDAF------EAASCRILSLKRREVQSEQKRWRKHFFGPFDGI 227
SL +E P + L D E A ++ R W+ PF G
Sbjct: 172 SLEDE--RDRQPRVTHLFDVHSLEQQSEMAPRQVTCHTRGSPHPTTNHWKSQH--PFHGR 227
Query: 228 LGSILTCQSCLSQISLDYQFFHSLPLS-PVLDSGSTIPFGCTLEDCLKQFLTAEQLENYH 286
L S + C+ C Q + + F SL LS P G + TL+ CL F+++E + +
Sbjct: 228 LTSNMVCKHCEHQSPVRFDTFDSLSLSIPAATWGHPL----TLDHCLHHFISSESVRDVV 283
Query: 287 CSHCWHIAAIKYLSITEANEMEIEELRRCSAQDSCNCRSRLHLETLPWSNKFSHTLKKLS 346
C +C I A L+ ++E R S +K+L
Sbjct: 284 CDNCTKIEARGTLT-----GEKVEHQR-------------------------STFVKQLK 313
Query: 347 ISHCPQILCIHLQRVSINEMGELVKIWGHIAFP--LILDLFPF 387
+ PQ LCIHLQR+S + G +K H+ F L++D + +
Sbjct: 314 LGKLPQCLCIHLQRLSWSSHGTPLKRHEHVQFNEFLMMDFYKY 356
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 497 NTYLYRLASVVEHFGRVGSGHYTVYRSVRVESHEENPNEHFETPLTHWFCISDSQVYSVS 556
+TYL+RL +VV H G + SGH+ YR R +NP + W ISD V S
Sbjct: 432 STYLFRLMAVVVHHGDMHSGHFVTYR--RSPPSAKNP----LSTSNQWLWISDDTVRKAS 485
Query: 557 VNDVLAAEASLLFYERII 574
+ +VL++ A LLFYER++
Sbjct: 486 LQEVLSSSAYLLFYERVL 503
>sp|A2BGT0|UBP30_DANRE Ubiquitin carboxyl-terminal hydrolase 30 OS=Danio rerio GN=usp30
PE=3 SV=1
Length = 491
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 118/253 (46%), Gaps = 40/253 (15%)
Query: 60 WLSEKENRLEKLCLVPGLQNLGNNCFLNVILQALASCTCFLPFLQKVM----GECEEPDE 115
W + R ++ +VPGL NLGN CF+N +LQ LA+C F+ +L+ + E +
Sbjct: 49 WGPISDRRKKRKGMVPGLLNLGNTCFMNSLLQGLAACPSFIRWLEDFTSQNSADRERTER 108
Query: 116 DLPLTVALASLLEELCL--VGETRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMS 173
+ L+ +L LL+ L GE VL ++ A+ LY + + +QDA E F L S
Sbjct: 109 ETQLSRSLMQLLKALSSHDPGEDD-VLDAGGLLEALRLYRWHISSFEEQDAHELFHVLTS 167
Query: 174 SLREEFLESYSPNESSLVDAFEAASCRILSLKRREVQSEQKR---------------WRK 218
SL EE + P + L D + + V+S++K WR
Sbjct: 168 SLEEE--QERQPRVAHLFD---------MQTLEKSVESKEKNISCRSGGPLHPIPSLWRT 216
Query: 219 HFFGPFDGILGSILTCQSCLSQISLDYQFFHSLPLS-PVLDSGSTIPFGCTLEDCLKQFL 277
PF G L S + C+ C Q + Y F SL LS P + G + TL+ CL+ F+
Sbjct: 217 RH--PFHGRLTSYMACKRCEQQSPVHYDSFDSLSLSIPSIQWGRPV----TLDQCLQHFI 270
Query: 278 TAEQLENYHCSHC 290
++E ++ C +C
Sbjct: 271 SSETIKEVECENC 283
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 499 YLYRLASVVEHFGRVGSGHYTVYRSVRVESHEENPNEHFETPLTHWFCISDSQVYSVSVN 558
YL+RL +V+ H G + SGH+ YR +P + W +SD V S+
Sbjct: 414 YLFRLTAVLVHHGDMHSGHFITYRRCPAAPRGTSPFS------SQWLWVSDDSVRKASLQ 467
Query: 559 DVLAAEASLLFYERI 573
+VL++ A LLFYER+
Sbjct: 468 EVLSSSAYLLFYERM 482
>sp|P40818|UBP8_HUMAN Ubiquitin carboxyl-terminal hydrolase 8 OS=Homo sapiens GN=USP8 PE=1
SV=1
Length = 1118
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 130/335 (38%), Gaps = 93/335 (27%)
Query: 76 GLQNLGNNCFLNVILQALASCTCFLPFLQKVMGE-CEEPDEDLP-LTVALASLLEELCLV 133
GL+NLGN C++N ILQ C C P L C + D + L + EE ++
Sbjct: 778 GLRNLGNTCYMNSILQ----CLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 833
Query: 134 ------GETRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLES----- 182
G+ R + SP+ + + F SQQD++E L LM L E+ ++
Sbjct: 834 MKALWTGQYRYI-SPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNRKR 892
Query: 183 YSPNESSLVDAFEAASCRILSLKRREVQSEQKRWRKH-------FFGPFDGILGSILTCQ 235
Y + +D F+AA + W+KH F G S + C
Sbjct: 893 YKEENNDHLDDFKAA---------------EHAWQKHKQLNESIIVALFQGQFKSTVQCL 937
Query: 236 SCLSQISLDYQFFH-SLPLSPVLDSGSTIPFGCTLEDCLKQFLTAEQLENYHCSHCWHIA 294
+C + F + SLPL+ CTL+DCL+ F E+L + + +C H
Sbjct: 938 TCHKKSRTFEAFMYLSLPLAST--------SKCTLQDCLRLFSKEEKLTDNNRFYCSH-- 987
Query: 295 AIKYLSITEANEMEIEELRRCSAQDSCNCRSRLHLETLPWSNKFSHTLKKLSISHCPQIL 354
CR+R +LKK+ I P +L
Sbjct: 988 ----------------------------CRAR------------RDSLKKIEIWKLPPVL 1007
Query: 355 CIHLQRVSINEMGELVKIWGHIAFPL-ILDLFPFV 388
+HL+R S + + K+ + FPL LDL +V
Sbjct: 1008 LVHLKRFSYDGRWKQ-KLQTSVDFPLENLDLSQYV 1041
>sp|A6NNY8|UBP27_HUMAN Ubiquitin carboxyl-terminal hydrolase 27 OS=Homo sapiens GN=USP27X
PE=2 SV=3
Length = 438
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 145/374 (38%), Gaps = 100/374 (26%)
Query: 76 GLQNLGNNCFLNVILQALASCTCFLPFLQKVMGECEEPDEDLPLTVALASLLEELCLVGE 135
GL NLGN CF+N I+QAL F CE P +L L ++SL EL
Sbjct: 79 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMPSPELCLVCEMSSLFRELYSGNP 138
Query: 136 TRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYSPNESSLVDAFE 195
+ V P K++ + ++ ++ QQDA E + + L + +
Sbjct: 139 SPHV--PYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHR---HCKGDDVGKAANNPN 193
Query: 196 AASCRILSLKRREVQSEQKRWRKHFFGPFDGILGSILTCQSCLS---------QISLDY- 245
+C I + F G L S +TCQ+C ISLD
Sbjct: 194 HCNCIIDQI-------------------FTGGLQSDVTCQACHGVSTTIDPCWDISLDLP 234
Query: 246 ----QFFHSLPLSPVLDSG----STIPFGCTLEDCLKQFLTAEQLENYHCSHCWHIAAIK 297
F+ P+SP +S S IP TL DCL++F E L +
Sbjct: 235 GSCTSFW---PMSPGRESSVNGESHIPGITTLTDCLRRFTRPEHLGS------------- 278
Query: 298 YLSITEANEMEIEELRRCSAQDSC-NCRSRLHLETLPWSNKFSHTLKKLSISHCPQILCI 356
SA+ C +C+S + + K+L+++ P + C
Sbjct: 279 ------------------SAKIKCGSCQS------------YQESTKQLTMNKLPVVACF 308
Query: 357 HLQRVSINEMGELVKIWGHIAFPLILDLFPFVKSGVGINDLDESWQRGQAKVLNERPSSS 416
H +R + + KI +I+FPL LD+ PF+ S ES GQ ++ P++S
Sbjct: 309 HFKRFE-HSAKQRRKITTYISFPLELDMTPFMASS------KESRMNGQLQL----PTNS 357
Query: 417 LNHVNRKYDAKVLN 430
N+ N+ V+N
Sbjct: 358 GNNENKYSLFAVVN 371
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 15/78 (19%)
Query: 497 NTYLYRLASVVEHFGRVGSGHYTVYRSVRVESHEENPNEHFETPLTHWFCISDSQVYSVS 556
N Y L +VV H G + SGHYT + + H++ WF D+ + S
Sbjct: 360 NENKYSLFAVVNHQGTLESGHYTSF----IRHHKDQ-----------WFKCDDAVITKAS 404
Query: 557 VNDVLAAEASLLFYERII 574
+ DVL +E LLFY + +
Sbjct: 405 IKDVLDSEGYLLFYHKQV 422
>sp|Q8CEG8|UBP27_MOUSE Ubiquitin carboxyl-terminal hydrolase 27 OS=Mus musculus GN=Usp27
PE=2 SV=2
Length = 438
Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 144/374 (38%), Gaps = 100/374 (26%)
Query: 76 GLQNLGNNCFLNVILQALASCTCFLPFLQKVMGECEEPDEDLPLTVALASLLEELCLVGE 135
GL NLGN CF+N I+QAL F CE P +L L ++SL EL
Sbjct: 79 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMPSPELCLVCEMSSLFRELYSGNP 138
Query: 136 TRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYSPNESSLVDAFE 195
+ V P K++ + ++ ++ QQDA E + + L + +
Sbjct: 139 SPHV--PYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHR---HCKGDDVGKVASNPN 193
Query: 196 AASCRILSLKRREVQSEQKRWRKHFFGPFDGILGSILTCQSCLS---------QISLDY- 245
+C I + F G L S +TCQ+C ISLD
Sbjct: 194 HCNCIIDQI-------------------FTGGLQSDVTCQACHGVSTTIDPCWDISLDLP 234
Query: 246 ----QFFHSLPLSP----VLDSGSTIPFGCTLEDCLKQFLTAEQLENYHCSHCWHIAAIK 297
F+ P+SP L+ S IP TL DCL++F E L +
Sbjct: 235 GSCTSFW---PMSPGRESSLNGESHIPGITTLTDCLRRFTRPEHLGS------------- 278
Query: 298 YLSITEANEMEIEELRRCSAQDSC-NCRSRLHLETLPWSNKFSHTLKKLSISHCPQILCI 356
SA+ C +C+S + + K+L++ P + C
Sbjct: 279 ------------------SAKIKCGSCQS------------YQESTKQLTMKKLPVVACF 308
Query: 357 HLQRVSINEMGELVKIWGHIAFPLILDLFPFVKSGVGINDLDESWQRGQAKVLNERPSSS 416
H +R + + KI +I+FPL LD+ PF+ S E+ GQ ++ P++S
Sbjct: 309 HFKRFE-HSAKQRRKITTYISFPLELDMTPFMASS------KETRVNGQLQL----PTNS 357
Query: 417 LNHVNRKYDAKVLN 430
N+ N+ V+N
Sbjct: 358 ANNENKYSLFAVVN 371
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 15/78 (19%)
Query: 497 NTYLYRLASVVEHFGRVGSGHYTVYRSVRVESHEENPNEHFETPLTHWFCISDSQVYSVS 556
N Y L +VV H G + SGHYT + + H + WF D+ + S
Sbjct: 360 NENKYSLFAVVNHQGTLESGHYTSF----IRHHRDQ-----------WFKCDDAVITKAS 404
Query: 557 VNDVLAAEASLLFYERII 574
+ DVL +E LLFY + +
Sbjct: 405 IKDVLDSEGYLLFYHKQV 422
>sp|Q80U87|UBP8_MOUSE Ubiquitin carboxyl-terminal hydrolase 8 OS=Mus musculus GN=Usp8 PE=1
SV=2
Length = 1080
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 131/330 (39%), Gaps = 83/330 (25%)
Query: 76 GLQNLGNNCFLNVILQALASCTCFLPFLQKVMGE-CEEPDEDLP-LTVALASLLEELCLV 133
GL+NLGN C++N ILQ C C P L C + D + L + EE ++
Sbjct: 740 GLRNLGNTCYMNSILQ----CLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 795
Query: 134 ------GETRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYSPNE 187
G+ R + SP+ + + F +SQQD++E L LM L E+ N+
Sbjct: 796 MKALWTGQYRYI-SPKDFKVTIGKINDQFAGSSQQDSQELLLFLMDGLHEDL------NK 848
Query: 188 SSLVDAFEAASCRILSLKRREVQSEQKRWRKH-------FFGPFDGILGSILTCQSCLSQ 240
+ + + L ++Q+ + W+KH F G S + C +C +
Sbjct: 849 ADNRKRHKEENNEHLD----DLQAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCRRR 904
Query: 241 ISLDYQFFH-SLPLSPVLDSGSTIPFGCTLEDCLKQFLTAEQLENYHCSHCWHIAAIKYL 299
F + SLPL+ CTL+DCL+ F E+L + + +C H
Sbjct: 905 SRTFEAFMYLSLPLAST--------SKCTLQDCLRLFSKEEKLTDNNRFYCSH------- 949
Query: 300 SITEANEMEIEELRRCSAQDSCNCRSRLHLETLPWSNKFSHTLKKLSISHCPQILCIHLQ 359
CR+R +LKK+ I P +L +HL+
Sbjct: 950 -----------------------CRAR------------RDSLKKIEIWKLPPVLLVHLK 974
Query: 360 RVSINEMGELVKIWGHIAFPL-ILDLFPFV 388
R S + + K+ + FPL LDL +V
Sbjct: 975 RFSYDGRWK-QKLQTSVDFPLENLDLSQYV 1003
>sp|P0CAQ1|UBP16_EMENI Ubiquitin carboxyl-terminal hydrolase 16 OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=ubp16 PE=3 SV=1
Length = 624
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 142/368 (38%), Gaps = 74/368 (20%)
Query: 76 GLQNLGNNCFLNVILQALA---SCTCFL-----------PFLQKVMGECEEPD---EDLP 118
GL N N+CF+N +LQALA +L P + + EE D E P
Sbjct: 47 GLSNPANDCFINSVLQALAGLGDLRLYLIRELHRRELDGPEIYNQLPGPEEADQLREKRP 106
Query: 119 ----------LTVALASLLEELCLVGETRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAF 168
+T AL +L+ L + +S + + A+E + +QQDA+E
Sbjct: 107 DRIRELQQGTITRALKEMLDRLNERPIYKKTISARAFIQALEFAYRTRISRNQQDAQEFL 166
Query: 169 LHLMSSLREEF----------------------LESYSPNESSLVDAFEAASCRILSLKR 206
+ L +E+ E+ S E L D E I+ K
Sbjct: 167 QIVAERLSDEYHAGVKARQRAEKSIEFNPYQEREEAPSEIEVRLDDGTENGLPAIIDTKL 226
Query: 207 REVQSEQKRWRKHFFGPFDGILGSILTCQSCLSQISLDYQFFHSLPLSPVLDSGSTIPFG 266
+E+ +E + PF+G L S + CQ C + + F +L L V ST
Sbjct: 227 KEIDNE-------YGFPFEGKLESQIECQFCHYKYKPNQTSFVNLTLQ-VPQRSST---- 274
Query: 267 CTLEDCLKQFLTAEQLENYHCSHC--WHIAAIKYLSITEAN--------EMEIEELRRCS 316
TL C L E ++++ C C H +K ++ +A E EIE+++
Sbjct: 275 -TLNACFDGLLKTEYIDDFRCDKCRLLHAIEVKSNALVKAGSATDRQRLEAEIEKIQLAL 333
Query: 317 AQDSCNCRSRLHLETLPWSNKFSHTLKKLSISHCPQILCIHLQRVSINEMGELVKIWGHI 376
+ D N + L + K + + I+ P+I+ IHL R + G K +
Sbjct: 334 SSDPENALDGVTLPPAELAPK-RRIARHMRITVFPKIIAIHLSRSMFDRSGS-TKNAAKV 391
Query: 377 AFPLILDL 384
AFP L L
Sbjct: 392 AFPERLPL 399
>sp|Q2KJ09|UBP16_RAT Ubiquitin carboxyl-terminal hydrolase 16 OS=Rattus norvegicus
GN=Usp16 PE=2 SV=2
Length = 826
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 500 LYRLASVVEHFGRVGSGHYTVYRSVRVES--------HEENPNE-HFETPLTHWFCISDS 550
LY L VVEH G + SGHYT Y R S H + P + E+ WF ISD+
Sbjct: 743 LYSLYGVVEHSGTMRSGHYTAYAKERTASCHLSNLVLHGDIPQDCEMESTKGQWFHISDT 802
Query: 551 QVYSVSVNDVLAAEASLLFYERII 574
V +V + VL ++A LLFYERI+
Sbjct: 803 HVQAVPITKVLNSQAYLLFYERIL 826
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 34/211 (16%)
Query: 74 VPGLQNLGNNCFLNVILQALASCTCFLPFLQKV-----MGECEEPDEDL----------- 117
V GL NLGN CF N ++Q L+ L++V + + E PD L
Sbjct: 194 VKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLEVNLEPP 253
Query: 118 -PLTVALASLLEELCLVGETRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLR 176
PLT+A++ L E + + +++P+++ + F QQD++E +L+ +R
Sbjct: 254 GPLTLAMSQFLNE--MQENKKRIVTPKELFSQVCKKATRFKGYQQQDSQELLRYLLDGMR 311
Query: 177 EEFLESYSPNESSLVDAFEAASCRILSLKRREVQSEQKRWRKHFFGP------FDGILGS 230
E + S ++ AF ++ ++ EV+++ K + K P F G L S
Sbjct: 312 AEEHQRVS---KGILKAFGNSTEKL----DEEVKNKVKDYEKKKAIPSFVDRIFGGELTS 364
Query: 231 ILTCQSCLSQISLDYQFFHSLPLSPVLDSGS 261
+ C C + +SL ++ F L L PVLD S
Sbjct: 365 TIMCDDCRT-VSLVHESFLDLSL-PVLDDQS 393
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 28/122 (22%)
Query: 267 CTLEDCLKQFLTAEQLENYHCSHCWHIAAIKYLSITEANEMEIEELRRCSAQDSCNCRSR 326
C+++ CL QF E+L++ + C E+ R+C+ + R
Sbjct: 633 CSIQHCLYQFTRNEKLQDANKLLC-----------------EVCTRRQCNGPKANIKGER 675
Query: 327 LHLETLPWSNKFSHTLKKLSISHCPQILCIHLQRVSINEMG-ELVKIWGHIAFPLILDLF 385
H+ +++ K++ +S P +L +HL+R + G L K+ HI FP ILDL
Sbjct: 676 KHV--------YTNAKKQMLVSLAPPVLTLHLKR--FQQAGFNLRKVNKHIKFPEILDLA 725
Query: 386 PF 387
PF
Sbjct: 726 PF 727
>sp|B2GUX4|UBP21_RAT Ubiquitin carboxyl-terminal hydrolase 21 OS=Rattus norvegicus
GN=Usp21 PE=2 SV=1
Length = 565
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 131/345 (37%), Gaps = 86/345 (24%)
Query: 76 GLQNLGNNCFLNVILQALASCTCF------LPFLQKVMGECEEPDEDLPLTVALASLLEE 129
GL+NLGN CFLN +LQ L+S F Q+V G + LT A A ++
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQE----LTEAFADVIGA 268
Query: 130 LCLVGETRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYSPNESS 189
L V +P + + Y+ +F+ SQQDA+E LM L E N
Sbjct: 269 LWHPDSCEAV-NPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEI------NRRG 321
Query: 190 LVDAFEAASCRILSLKRR--------EVQSEQKR---WRKHF-------FGPFDGILGSI 231
AS + S RR E+ + + W+++ F G L S
Sbjct: 322 RRAPPILASGPVPSPPRRGGALHEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSC 381
Query: 232 LTCQSCLSQISLDYQFF--HSLPLSPVLDSGSTIPFGCTLEDCLKQFLTAEQLENYHCSH 289
L CQ+C S ++ F SLP+ +G + +L DC F E+LE+ +
Sbjct: 382 LKCQAC-GYRSTTFEVFCDLSLPIPKKGFAGGKV----SLRDCFSLFTKEEELESENAPV 436
Query: 290 CWHIAAIKYLSITEANEMEIEELRRCSAQDSCNCRSRLHLETLPWSNKFSHTLKKLSISH 349
C D C ++R + KKL++
Sbjct: 437 C----------------------------DRCRQKTR--------------STKKLTVQR 454
Query: 350 CPQILCIHLQRVSINEMGELVKIWGHIAFPL-ILDLFPFVKSGVG 393
P+IL +HL R S + G + K + FPL L L F VG
Sbjct: 455 FPRILVLHLNRFSTSR-GSIKKSSVGVDFPLQRLSLGDFASDKVG 498
Score = 36.2 bits (82), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 16/76 (21%)
Query: 500 LYRLASVVEHFGRVGSGHYTVYRSVRVESHEENPNEHFETPLTHWFCISDSQVYSVSVND 559
+Y+L ++ H G V GHYT R + T W +DS+V VS N
Sbjct: 501 VYQLYALCNHSGSVHYGHYTAL--CRCQ--------------TGWHVYNDSRVSPVSENQ 544
Query: 560 VLAAEASLLFYERIIE 575
V ++E +LFY+ + E
Sbjct: 545 VASSEGYVLFYQLMQE 560
>sp|P32571|UBP4_YEAST Ubiquitin carboxyl-terminal hydrolase 4 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=DOA4 PE=1 SV=2
Length = 926
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 141/356 (39%), Gaps = 86/356 (24%)
Query: 76 GLQNLGNNCFLNVILQ-ALASCTCFLPFLQKVMGECEEPDEDLPLTVALASLLEELC--- 131
GL+NLGN+C++N I+Q L + FL + + L LA L
Sbjct: 563 GLENLGNSCYMNCIIQCILGTHELTQIFLDDSYAKHININSKLGSKGILAKYFARLVHMM 622
Query: 132 ----LVGETRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYSPNE 187
+ G ++ +SP K LA F SQQD +E L+ L E+ + S
Sbjct: 623 YKEQVDGSKKISISPIKFKLACGSVNSLFKTASQQDCQEFCQFLLDGLHEDLNQCGS--N 680
Query: 188 SSLVDAFEAASCRILSLKRREVQS-EQKRWRKHFFGP----FDGILGSILTCQSCLSQIS 242
L + + A R L R S E +R+ F F G S L C+ C S S
Sbjct: 681 PPLKELSQEAEARREKLSLRIASSIEWERFLTTDFSVIVDLFQGQYASRLKCKVC-SHTS 739
Query: 243 LDYQFFH--SLPLSPVLDSGSTIPFGCTLEDCLKQFLTAEQL---ENYHCSHCWHIAAIK 297
YQ F S+P+ P +S + I T+EDC ++F E L E + C HC
Sbjct: 740 TTYQPFTVLSIPI-PKKNSRNNI----TIEDCFREFTKCENLEVDEQWLCPHC------- 787
Query: 298 YLSITEANEMEIEELRRCSAQDSCNCRSRLHLETLPWSNKFSHTLKKLSISHCPQILCIH 357
E R+ S K+L+I+ P+ L +H
Sbjct: 788 -------------EKRQPST-------------------------KQLTITRLPRNLIVH 809
Query: 358 LQRVS--INEMGELVKIWGHIAFPLILDLFPFVKS---GV---GINDLDESWQRGQ 405
L+R +N+ + V +P +LDL PF + GV G+ND DE RGQ
Sbjct: 810 LKRFDNLLNKNNDFV------IYPFLLDLTPFWANDFDGVFPPGVND-DELPIRGQ 858
>sp|Q99LG0|UBP16_MOUSE Ubiquitin carboxyl-terminal hydrolase 16 OS=Mus musculus GN=Usp16
PE=1 SV=1
Length = 825
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 500 LYRLASVVEHFGRVGSGHYTVYRSVRVES--------HEENPNE-HFETPLTHWFCISDS 550
LY L VVEH G + SGHYT Y R S H + P + E+ WF ISD+
Sbjct: 742 LYSLYGVVEHSGTMRSGHYTAYAKERTASCHLSNLVLHGDIPQDCEMESTKGQWFHISDT 801
Query: 551 QVYSVSVNDVLAAEASLLFYERII 574
V +V + VL ++A LLFYERI+
Sbjct: 802 HVQAVPITKVLNSQAYLLFYERIL 825
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 34/211 (16%)
Query: 74 VPGLQNLGNNCFLNVILQALASCTCFLPFLQKV-----MGECEEPDEDL----------- 117
V GL NLGN CF N ++Q L+ L++V + + E PD L
Sbjct: 194 VKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLEVNLEPP 253
Query: 118 -PLTVALASLLEELCLVGETRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLR 176
PLT+A++ L E + + V++P+++ + F QQD++E +L+ +R
Sbjct: 254 GPLTLAMSQFLSE--MQENKKRVVTPKELFSQVCKKATRFKGYQQQDSQELLRYLLDGMR 311
Query: 177 EEFLESYSPNESSLVDAFEAASCRILSLKRREVQSEQKRWRKHFFGP------FDGILGS 230
E + S ++ AF ++ ++ EV+++ K + K P F G L S
Sbjct: 312 AEEHQRVS---KGILKAFGNSTEKL----DEEVKNKVKDYEKKKAIPSFVDRIFGGELTS 364
Query: 231 ILTCQSCLSQISLDYQFFHSLPLSPVLDSGS 261
+ C C + +SL ++ F L L PVLD S
Sbjct: 365 TIMCDECRT-VSLVHESFLDLSL-PVLDDQS 393
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 28/122 (22%)
Query: 267 CTLEDCLKQFLTAEQLENYHCSHCWHIAAIKYLSITEANEMEIEELRRCSAQDSCNCRSR 326
C+++ CL QF E+L++ + C E+ R+C+ + R
Sbjct: 632 CSIQHCLYQFTRNEKLQDANKLLC-----------------EVCSRRQCNGPKANIKGDR 674
Query: 327 LHLETLPWSNKFSHTLKKLSISHCPQILCIHLQRVSINEMG-ELVKIWGHIAFPLILDLF 385
H+ +++ K++ +S P +L +HL+R + G L K+ HI FP ILDL
Sbjct: 675 RHV--------YTNAKKQMLVSLAPPVLTLHLKR--FQQAGFNLRKVNKHIKFPEILDLA 724
Query: 386 PF 387
PF
Sbjct: 725 PF 726
>sp|B3LGK1|UBP4_YEAS1 Ubiquitin carboxyl-terminal hydrolase 4 OS=Saccharomyces cerevisiae
(strain RM11-1a) GN=DOA4 PE=3 SV=1
Length = 926
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 141/356 (39%), Gaps = 86/356 (24%)
Query: 76 GLQNLGNNCFLNVILQ-ALASCTCFLPFLQKVMGECEEPDEDLPLTVALASLLEELC--- 131
GL+NLGN+C++N I+Q L + FL + + L LA L
Sbjct: 563 GLENLGNSCYMNCIIQCILGTHELTQIFLDDSYAKHININSKLGSKGILAKYFARLVHMM 622
Query: 132 ----LVGETRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYSPNE 187
+ G ++ +SP K LA F SQQD +E L+ L E+ + S
Sbjct: 623 YKEQVDGSKKIPISPIKFKLACGSVNSLFKTASQQDCQEFCQFLLDGLHEDLNQCGS--N 680
Query: 188 SSLVDAFEAASCRILSLKRREVQS-EQKRWRKHFFGP----FDGILGSILTCQSCLSQIS 242
L + + A R L R S E +R+ F F G S L C+ C S S
Sbjct: 681 PPLKELSQEAEARREKLSLRIASSIEWERFLTTDFSVIVDLFQGQYASRLKCKVC-SHTS 739
Query: 243 LDYQFFH--SLPLSPVLDSGSTIPFGCTLEDCLKQFLTAEQL---ENYHCSHCWHIAAIK 297
YQ F S+P+ P +S + I T+EDC ++F E L E + C HC
Sbjct: 740 TTYQPFTVLSIPI-PKKNSRNNI----TIEDCFREFTKCENLEVDEQWLCPHC------- 787
Query: 298 YLSITEANEMEIEELRRCSAQDSCNCRSRLHLETLPWSNKFSHTLKKLSISHCPQILCIH 357
E R+ S K+L+I+ P+ L +H
Sbjct: 788 -------------EKRQPST-------------------------KQLTITRLPRNLIVH 809
Query: 358 LQRVS--INEMGELVKIWGHIAFPLILDLFPFVKS---GV---GINDLDESWQRGQ 405
L+R +N+ + V +P +LDL PF + GV G+ND DE RGQ
Sbjct: 810 LKRFDNLLNKNNDFV------IYPFLLDLTPFWANDFDGVFPPGVND-DELPIRGQ 858
>sp|Q08DA3|UBP16_BOVIN Ubiquitin carboxyl-terminal hydrolase 16 OS=Bos taurus GN=USP16
PE=2 SV=1
Length = 826
Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 500 LYRLASVVEHFGRVGSGHYTVYRSVRVES--------HEENPNE-HFETPLTHWFCISDS 550
LY L VVEH G + SGHYT Y R + H + P + E+ WF ISD+
Sbjct: 743 LYSLYGVVEHSGTMRSGHYTAYAKTRTANTHLSNLVLHGDIPQDFEMESTKGQWFHISDT 802
Query: 551 QVYSVSVNDVLAAEASLLFYERII 574
V +V VL+++A LLFYERI+
Sbjct: 803 HVQAVPTTKVLSSQAYLLFYERIL 826
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 28/208 (13%)
Query: 74 VPGLQNLGNNCFLNVILQALASCTCFLPFLQKV-----MGECEEPDEDL----------- 117
V GL NLGN CF N ++Q L+ L++V + + E PD L
Sbjct: 194 VKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLEINLEPP 253
Query: 118 -PLTVALASLLEELCLVGETRL-VLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSL 175
PLT+A++ L E+ ET+ +++P+++ + F QQD++E +L+ +
Sbjct: 254 GPLTLAMSQFLNEM---QETKKGIVTPRELFSQVCKKAVRFKGYQQQDSQELLRYLLDGM 310
Query: 176 REEFLESYSPNESSLVDAFEAASCRI-LSLKRREVQSEQKRWRKHFFGP-FDGILGSILT 233
R E + S ++ AF+ ++ ++ LK + + E+K+ F F G L S +
Sbjct: 311 RAEEHQRVS---KGILKAFDNSTEKVDEELKNKVKEYEKKKSVPSFVDRIFGGELTSTIM 367
Query: 234 CQSCLSQISLDYQFFHSLPLSPVLDSGS 261
C C + +SL ++ F L L PVLD S
Sbjct: 368 CDECRT-VSLVHESFLDLSL-PVLDDQS 393
Score = 38.9 bits (89), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 28/122 (22%)
Query: 267 CTLEDCLKQFLTAEQLENYHCSHCWHIAAIKYLSITEANEMEIEELRRCSAQDSCNCRSR 326
C+++ CL QF E+L + + C + + S +AN M+ E R
Sbjct: 633 CSVQHCLYQFTRNEKLRDANKLLC-EVCTRRQYSGPKAN-MKGE---------------R 675
Query: 327 LHLETLPWSNKFSHTLKKLSISHCPQILCIHLQRVSINEMG-ELVKIWGHIAFPLILDLF 385
H+ +++ K++ IS P +L +H +R + G L K+ HI FP ILDL
Sbjct: 676 KHI--------YTNAKKQMLISLAPPVLTLHFKR--FQQAGFNLRKVNKHIKFPEILDLA 725
Query: 386 PF 387
PF
Sbjct: 726 PF 727
>sp|Q6DCJ1|UB22B_XENLA Ubiquitin carboxyl-terminal hydrolase 22-B OS=Xenopus laevis
GN=usp22-b PE=2 SV=2
Length = 523
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 143/371 (38%), Gaps = 93/371 (25%)
Query: 76 GLQNLGNNCFLNVILQALASCTCFLPFLQKVMGECEEPDEDLPLTVALASLLEELCLVGE 135
GL NLGN CF+N I+QAL F +CE + L +++L +E
Sbjct: 175 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPNSCLVCEMSTLFQEF--YSG 232
Query: 136 TRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYSPNESSLVDAFE 195
R P +++ + + ++ QQDA E L+++L + L + + + A
Sbjct: 233 HRSPHIPYRLLHLVWTHARHLAGYEQQDAHEF---LIAAL--DVLHRHCKGDDNGKKANN 287
Query: 196 AASCRILSLKRREVQSEQKRWRKHFFGPFDGILGSILTCQSC---------LSQISLDYQ 246
C + + F G L S +TCQ C ISLD
Sbjct: 288 PNHCNCIIDQ-----------------IFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLP 330
Query: 247 FFHS--LPLSPVLDSG-----STIPFGCTLEDCLKQFLTAEQLENYHCSHCWHIAAIKYL 299
+ PLSP D+G S + TL DCL++F E L + A IK
Sbjct: 331 GSSTPFWPLSPGSDAGVVNGESHVSGTTTLTDCLRRFTRPEHLGS--------SAKIK-- 380
Query: 300 SITEANEMEIEELRRCSAQDSCNCRSRLHLETLPWSNKFSHTLKKLSISHCPQILCIHLQ 359
CS C S + + K+L++ P + C HL+
Sbjct: 381 ---------------CSG-----CHS------------YQESTKQLTMKKLPIVACFHLK 408
Query: 360 RVSINEMGELVKIWGHIAFPLILDLFPFVKSGVGINDLDESWQRGQAKVLNERPSSSLNH 419
R + KI +++FPL LD+ PF+ S ES GQ ++PS SL++
Sbjct: 409 RFE-HSAKLRRKITTYVSFPLELDMMPFMASS------KESRMNGQY----QQPSDSLHN 457
Query: 420 VNRKYDAKVLN 430
N+ V+N
Sbjct: 458 DNKYSLFAVVN 468
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 23/109 (21%)
Query: 464 ILPPTQSGSNVRGRDIQMQPDDEVIGSSQLCQPNTYLYRLASVVEHFGRVGSGHYTVYRS 523
++P S R QP D + ++ Y L +VV H G + SGHYT +
Sbjct: 432 MMPFMASSKESRMNGQYQQPSDSLHNDNK--------YSLFAVVNHQGTLESGHYTSF-- 481
Query: 524 VRVESHEENPNEHFETPLTHWFCISDSQVYSVSVNDVLAAEASLLFYER 572
+ H++ WF D+ + S+ DV+ +E LLFY +
Sbjct: 482 --IRQHKDQ-----------WFKCDDAIITKASIKDVIDSEGYLLFYHK 517
>sp|Q4R6X7|UBP16_MACFA Ubiquitin carboxyl-terminal hydrolase 16 OS=Macaca fascicularis
GN=USP16 PE=2 SV=2
Length = 826
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 500 LYRLASVVEHFGRVGSGHYTVYRSVRV-ESHEENPNEHFETPLT-------HWFCISDSQ 551
LY L VVEH G + SGHYT Y R SH N H + P WF ISD+
Sbjct: 744 LYSLYGVVEHSGTMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWFHISDTH 803
Query: 552 VYSVSVNDVLAAEASLLFYERII 574
V +V VL ++A LLFYERI+
Sbjct: 804 VQAVPTTKVLNSQAYLLFYERIL 826
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 28/208 (13%)
Query: 74 VPGLQNLGNNCFLNVILQALASCTCFLPFLQKV-----MGECEEPDEDL----------- 117
V GL NLGN CF N ++Q L+ L++V + + E PD L
Sbjct: 195 VKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLEINLEPP 254
Query: 118 -PLTVALASLLEELCLVGETRL-VLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSL 175
PLT+A++ L E+ ET+ +++P+++ + F QQD++E +L+ +
Sbjct: 255 GPLTLAMSQFLNEM---QETKKGIVTPKELFSQVCKKAVRFKGYQQQDSQELLRYLLDGM 311
Query: 176 REEFLESYSPNESSLVDAFEAASCRI-LSLKRREVQSEQKRWRKHFFGP-FDGILGSILT 233
R E + S ++ AF ++ ++ LK + E+K+ F F G L S +
Sbjct: 312 RAEEHQRVS---KGILKAFGNSTEKLDEELKNKVKDYEKKKSIPSFVDRIFGGELTSTIM 368
Query: 234 CQSCLSQISLDYQFFHSLPLSPVLDSGS 261
C C + +SL ++ F L L PVLD S
Sbjct: 369 CDQCRT-VSLVHESFLDLSL-PVLDDQS 394
Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 28/122 (22%)
Query: 267 CTLEDCLKQFLTAEQLENYHCSHCWHIAAIKYLSITEANEMEIEELRRCSAQDSCNCRSR 326
C+++ CL QF E+L + + C E+ R+C+ + R
Sbjct: 634 CSIQHCLYQFTRNEKLRDANKLLC-----------------EVCTRRQCNGPKANMKGER 676
Query: 327 LHLETLPWSNKFSHTLKKLSISHCPQILCIHLQRVSINEMG-ELVKIWGHIAFPLILDLF 385
H+ +++ K++ IS P +L +HL+R + G L K+ HI FP ILDL
Sbjct: 677 KHV--------YTNAKKQMLISLAPPVLTLHLKR--FQQAGFNLRKVNKHIKFPEILDLA 726
Query: 386 PF 387
PF
Sbjct: 727 PF 728
>sp|Q9Y5T5|UBP16_HUMAN Ubiquitin carboxyl-terminal hydrolase 16 OS=Homo sapiens GN=USP16
PE=1 SV=1
Length = 823
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 500 LYRLASVVEHFGRVGSGHYTVYRSVRV-ESHEENPNEHFETPLT-------HWFCISDSQ 551
LY L VVEH G + SGHYT Y R SH N H + P WF ISD+
Sbjct: 741 LYSLYGVVEHSGTMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWFHISDTH 800
Query: 552 VYSVSVNDVLAAEASLLFYERII 574
V +V VL ++A LLFYERI+
Sbjct: 801 VQAVPTTKVLNSQAYLLFYERIL 823
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 28/208 (13%)
Query: 74 VPGLQNLGNNCFLNVILQALASCTCFLPFLQKV-----MGECEEPDEDL----------- 117
V GL NLGN CF N ++Q L+ L++V + + E PD L
Sbjct: 195 VKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLEINLEPP 254
Query: 118 -PLTVALASLLEELCLVGETRL-VLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSL 175
PLT+A++ L E+ ET+ V++P+++ + F QQD++E +L+ +
Sbjct: 255 GPLTLAMSQFLNEM---QETKKGVVTPKELFSQVCKKAVRFKGYQQQDSQELLRYLLDGM 311
Query: 176 REEFLESYSPNESSLVDAFEAASCRI-LSLKRREVQSEQKRWRKHFFGP-FDGILGSILT 233
R E + S ++ AF ++ ++ LK + E+K+ F F G L S++
Sbjct: 312 RAEEHQRVS---KGILKAFGNSTEKLDEELKNKVKDYEKKKSMPSFVDRIFGGELTSMIM 368
Query: 234 CQSCLSQISLDYQFFHSLPLSPVLDSGS 261
C C + +SL ++ F L L PVLD S
Sbjct: 369 CDQCRT-VSLVHESFLDLSL-PVLDDQS 394
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 28/122 (22%)
Query: 267 CTLEDCLKQFLTAEQLENYHCSHCWHIAAIKYLSITEANEMEIEELRRCSAQDSCNCRSR 326
C+++ CL QF E+L + + C E+ R+C+ + R
Sbjct: 631 CSIQHCLYQFTRNEKLRDANKLLC-----------------EVCTRRQCNGPKANIKGER 673
Query: 327 LHLETLPWSNKFSHTLKKLSISHCPQILCIHLQRVSINEMG-ELVKIWGHIAFPLILDLF 385
H+ +++ K++ IS P +L +HL+R + G L K+ HI FP ILDL
Sbjct: 674 KHV--------YTNAKKQMLISLAPPVLTLHLKR--FQQAGFNLRKVNKHIKFPEILDLA 723
Query: 386 PF 387
PF
Sbjct: 724 PF 725
>sp|P0C8Z3|UBP22_BOVIN Ubiquitin carboxyl-terminal hydrolase 22 OS=Bos taurus GN=USP22
PE=2 SV=1
Length = 514
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 141/371 (38%), Gaps = 93/371 (25%)
Query: 76 GLQNLGNNCFLNVILQALASCTCFLPFLQKVMGECEEPDEDLPLTVALASLLEELCLVGE 135
GL NLGN CF+N I+QAL F CE L ++SL +E
Sbjct: 166 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQE--FYSG 223
Query: 136 TRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYSPNESSLVDAFE 195
R P K++ + + ++ QQDA E L+++L + L + + + A
Sbjct: 224 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEF---LIAAL--DVLHRHCKGDDNGKKANN 278
Query: 196 AASCRILSLKRREVQSEQKRWRKHFFGPFDGILGSILTCQSC---------LSQISLDYQ 246
C + + F G L S +TCQ C ISLD
Sbjct: 279 PNHCNCIIDQ-----------------IFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLP 321
Query: 247 FFHS--LPLSP-----VLDSGSTIPFGCTLEDCLKQFLTAEQLENYHCSHCWHIAAIKYL 299
+ PLSP V++ S + TL DCL++F E L + A IK
Sbjct: 322 GSSTPFWPLSPGSESSVVNGESHVSGTTTLTDCLRRFTRPEHLGSS--------AKIK-- 371
Query: 300 SITEANEMEIEELRRCSAQDSCNCRSRLHLETLPWSNKFSHTLKKLSISHCPQILCIHLQ 359
CS C S + + K+L++ P + C HL+
Sbjct: 372 ---------------CSG-----CHS------------YQESTKQLTMKKLPIVACFHLK 399
Query: 360 RVSINEMGELVKIWGHIAFPLILDLFPFVKSGVGINDLDESWQRGQAKVLNERPSSSLNH 419
R + KI +++FPL LD+ PF+ S ES GQ ++P+ SLN+
Sbjct: 400 RFE-HSAKLRRKITTYVSFPLELDMTPFMASS------KESRMNGQY----QQPTDSLNN 448
Query: 420 VNRKYDAKVLN 430
N+ V+N
Sbjct: 449 DNKYSLFAVVN 459
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 44/109 (40%), Gaps = 23/109 (21%)
Query: 464 ILPPTQSGSNVRGRDIQMQPDDEVIGSSQLCQPNTYLYRLASVVEHFGRVGSGHYTVYRS 523
+ P S R QP D + N Y L +VV H G + SGHYT +
Sbjct: 423 MTPFMASSKESRMNGQYQQPTDSL--------NNDNKYSLFAVVNHQGTLESGHYTSF-- 472
Query: 524 VRVESHEENPNEHFETPLTHWFCISDSQVYSVSVNDVLAAEASLLFYER 572
+ H++ WF D+ + S+ DVL +E LLFY +
Sbjct: 473 --IRQHKDQ-----------WFKCDDAIITKASIADVLDSEGYLLFYHK 508
>sp|A6ZY34|UBP4_YEAS7 Ubiquitin carboxyl-terminal hydrolase 4 OS=Saccharomyces cerevisiae
(strain YJM789) GN=DOA4 PE=3 SV=1
Length = 926
Score = 62.4 bits (150), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 139/356 (39%), Gaps = 86/356 (24%)
Query: 76 GLQNLGNNCFLNVILQ-ALASCTCFLPFLQKVMGECEEPDEDLPLTVALASLLEELC--- 131
GL+NLGN+C++N I+Q L + FL + + L LA L
Sbjct: 563 GLENLGNSCYMNCIIQCILGTHELTQIFLDDSYAKHININSKLGSKGILAKYFARLVHMM 622
Query: 132 ----LVGETRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYSPNE 187
+ G ++ +SP K LA F SQQD +E L+ L E+ + S
Sbjct: 623 YKEQVDGSKKISISPIKFKLACGSVNSLFKTASQQDCQEFCQFLLDGLHEDLNQCGS--N 680
Query: 188 SSLVDAFEAASCRILSLKRREVQS-EQKRWRKHFFGP----FDGILGSILTCQSCLSQIS 242
L + + A R L R S E +R+ F F G S L C+ C S S
Sbjct: 681 PPLKELSQEAEARREKLSLRIASSIEWERFLTTDFSVIVDLFQGQYASRLKCKVC-SHTS 739
Query: 243 LDYQFFH--SLPLSPVLDSGSTIPFGCTLEDCLKQFLTAEQL---ENYHCSHCWHIAAIK 297
YQ F S+P+ P +S + I T+EDC ++F E L E + C HC
Sbjct: 740 TTYQPFTVLSIPI-PKKNSRNNI----TIEDCFREFTKCENLEVDEQWLCPHC------- 787
Query: 298 YLSITEANEMEIEELRRCSAQDSCNCRSRLHLETLPWSNKFSHTLKKLSISHCPQILCIH 357
K + K+L+I+ P+ L +H
Sbjct: 788 --------------------------------------KKRQPSTKQLTITRLPRNLIVH 809
Query: 358 LQRVS--INEMGELVKIWGHIAFPLILDLFPFVKS---GV---GINDLDESWQRGQ 405
L+R +N+ + V +P +LDL PF + GV G+ND DE RGQ
Sbjct: 810 LKRFDNLLNKNNDFV------IYPFLLDLTPFWANDFDGVFPPGVND-DELPIRGQ 858
>sp|Q9UPT9|UBP22_HUMAN Ubiquitin carboxyl-terminal hydrolase 22 OS=Homo sapiens GN=USP22
PE=1 SV=2
Length = 525
Score = 62.4 bits (150), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 141/371 (38%), Gaps = 93/371 (25%)
Query: 76 GLQNLGNNCFLNVILQALASCTCFLPFLQKVMGECEEPDEDLPLTVALASLLEELCLVGE 135
GL NLGN CF+N I+QAL F CE L ++SL +E
Sbjct: 177 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQE--FYSG 234
Query: 136 TRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYSPNESSLVDAFE 195
R P K++ + + ++ QQDA E L+++L + L + + + A
Sbjct: 235 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEF---LIAAL--DVLHRHCKGDDNGKKANN 289
Query: 196 AASCRILSLKRREVQSEQKRWRKHFFGPFDGILGSILTCQSC---------LSQISLDYQ 246
C + + F G L S +TCQ C ISLD
Sbjct: 290 PNHCNCIIDQ-----------------IFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLP 332
Query: 247 FFHS--LPLSP-----VLDSGSTIPFGCTLEDCLKQFLTAEQLENYHCSHCWHIAAIKYL 299
+ PLSP V++ S + TL DCL++F E L + A IK
Sbjct: 333 GSSTPFWPLSPGSEGNVVNGESHVSGTTTLTDCLRRFTRPEHLGSS--------AKIK-- 382
Query: 300 SITEANEMEIEELRRCSAQDSCNCRSRLHLETLPWSNKFSHTLKKLSISHCPQILCIHLQ 359
CS C S + + K+L++ P + C HL+
Sbjct: 383 ---------------CSG-----CHS------------YQESTKQLTMKKLPIVACFHLK 410
Query: 360 RVSINEMGELVKIWGHIAFPLILDLFPFVKSGVGINDLDESWQRGQAKVLNERPSSSLNH 419
R + KI +++FPL LD+ PF+ S ES GQ ++P+ SLN+
Sbjct: 411 RFE-HSAKLRRKITTYVSFPLELDMTPFMASS------KESRMNGQY----QQPTDSLNN 459
Query: 420 VNRKYDAKVLN 430
N+ V+N
Sbjct: 460 DNKYSLFAVVN 470
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 15/76 (19%)
Query: 497 NTYLYRLASVVEHFGRVGSGHYTVYRSVRVESHEENPNEHFETPLTHWFCISDSQVYSVS 556
N Y L +VV H G + SGHYT + + H++ WF D+ + S
Sbjct: 459 NDNKYSLFAVVNHQGTLESGHYTSF----IRQHKDQ-----------WFKCDDAIITKAS 503
Query: 557 VNDVLAAEASLLFYER 572
+ DVL +E LLFY +
Sbjct: 504 IKDVLDSEGYLLFYHK 519
>sp|Q6GNI6|UB22A_XENLA Ubiquitin carboxyl-terminal hydrolase 22-A OS=Xenopus laevis
GN=usp22-a PE=2 SV=1
Length = 523
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 143/371 (38%), Gaps = 93/371 (25%)
Query: 76 GLQNLGNNCFLNVILQALASCTCFLPFLQKVMGECEEPDEDLPLTVALASLLEELCLVGE 135
GL NLGN CF+N I+QAL F +CE + L +++L +E
Sbjct: 175 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPNSCLVCEMSTLFQE--FYSG 232
Query: 136 TRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYSPNESSLVDAFE 195
R P +++ + + ++ QQDA E L+++L + L + + + A
Sbjct: 233 HRSPHIPYRLLHLVWTHARHLAGYEQQDAHEF---LIAAL--DVLHRHCKGDDNGKKANN 287
Query: 196 AASCRILSLKRREVQSEQKRWRKHFFGPFDGILGSILTCQSC---------LSQISLDYQ 246
C + + F G L S +TCQ C ISLD
Sbjct: 288 PNHCNCIIDQ-----------------IFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLP 330
Query: 247 FFHS--LPLSPVLDSG-----STIPFGCTLEDCLKQFLTAEQLENYHCSHCWHIAAIKYL 299
+ PLSP D+G S + TL DCL++F E L + A IK
Sbjct: 331 GSSTPFWPLSPGSDAGVVNGESHVSGTTTLTDCLRRFTRPEHLGS--------SAKIK-- 380
Query: 300 SITEANEMEIEELRRCSAQDSCNCRSRLHLETLPWSNKFSHTLKKLSISHCPQILCIHLQ 359
CS C S + + K+L++ P + C HL+
Sbjct: 381 ---------------CSG-----CHS------------YQESTKQLTMKKLPIVACFHLK 408
Query: 360 RVSINEMGELVKIWGHIAFPLILDLFPFVKSGVGINDLDESWQRGQAKVLNERPSSSLNH 419
R + KI +++FPL LD+ PF+ S ES GQ ++PS SL++
Sbjct: 409 RFE-HSAKLRRKITTYVSFPLELDMTPFMASS------KESRMNGQY----QQPSDSLHN 457
Query: 420 VNRKYDAKVLN 430
N+ V+N
Sbjct: 458 DNKYSLFAVVN 468
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 23/109 (21%)
Query: 464 ILPPTQSGSNVRGRDIQMQPDDEVIGSSQLCQPNTYLYRLASVVEHFGRVGSGHYTVYRS 523
+ P S R QP D + ++ Y L +VV H G + SGHYT +
Sbjct: 432 MTPFMASSKESRMNGQYQQPSDSLHNDNK--------YSLFAVVNHQGTLESGHYTSF-- 481
Query: 524 VRVESHEENPNEHFETPLTHWFCISDSQVYSVSVNDVLAAEASLLFYER 572
+ H++ WF D+ + S+ DVL +E LLFY +
Sbjct: 482 --IRQHKDQ-----------WFKCDDAIITKASIKDVLDSEGYLLFYHK 517
>sp|Q9QZL6|UBP21_MOUSE Ubiquitin carboxyl-terminal hydrolase 21 OS=Mus musculus GN=Usp21
PE=1 SV=1
Length = 566
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 124/328 (37%), Gaps = 78/328 (23%)
Query: 76 GLQNLGNNCFLNVILQALASCTCFLPFLQKVMGECEEPDEDLP--LTVALASLLEELCLV 133
GL+NLGN CFLN +LQ L+S F + E P LT A A ++ L
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGALWHP 272
Query: 134 GETRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYSPNESSLVDA 193
V +P + + Y+ +F+ SQQDA+E LM L E N
Sbjct: 273 DSCEAV-NPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEI------NRRGRRAP 325
Query: 194 FEAASCRILSLKRR---------EVQSEQKR---WRKHF-------FGPFDGILGSILTC 234
AS + S RR E+ + + W+++ F G L S L C
Sbjct: 326 PILASGPVPSPPRRGGGALHEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKC 385
Query: 235 QSCLSQISLDYQFF--HSLPLSPVLDSGSTIPFGCTLEDCLKQFLTAEQLENYHCSHCWH 292
Q+C S ++ F SLP+ +G + +L DC F E+LE+ + C
Sbjct: 386 QAC-GYRSTTFEVFCDLSLPIPKKGFAGGKV----SLRDCFSLFTKEEELESENAPVC-- 438
Query: 293 IAAIKYLSITEANEMEIEELRRCSAQDSCNCRSRLHLETLPWSNKFSHTLKKLSISHCPQ 352
D C ++R + KKL++ P+
Sbjct: 439 --------------------------DRCRQKTR--------------STKKLTVQRFPR 458
Query: 353 ILCIHLQRVSINEMGELVKIWGHIAFPL 380
IL +HL R S + G + K + FPL
Sbjct: 459 ILVLHLNRFSTSR-GSIKKSSVGVDFPL 485
Score = 36.2 bits (82), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 16/76 (21%)
Query: 500 LYRLASVVEHFGRVGSGHYTVYRSVRVESHEENPNEHFETPLTHWFCISDSQVYSVSVND 559
+Y+L ++ H G V GHYT R + T W +DS+V VS N
Sbjct: 502 VYQLYALCNHSGSVHYGHYTAL--CRCQ--------------TGWHVYNDSRVSPVSENQ 545
Query: 560 VLAAEASLLFYERIIE 575
V ++E +LFY+ + E
Sbjct: 546 VASSEGYVLFYQLMQE 561
>sp|Q9UK80|UBP21_HUMAN Ubiquitin carboxyl-terminal hydrolase 21 OS=Homo sapiens GN=USP21
PE=1 SV=1
Length = 565
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 123/321 (38%), Gaps = 65/321 (20%)
Query: 76 GLQNLGNNCFLNVILQALASCTCFLPFLQKVMGECEEPDEDLP--LTVALASLLEELCLV 133
GL+NLGN CFLN +LQ L+S F + E P LT A A ++ L
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGALWHP 272
Query: 134 GETRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYSPNESSLVDA 193
V +P + + Y+ +F+ SQQDA+E LM L E L +
Sbjct: 273 DSCEAV-NPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILANG 331
Query: 194 FEAASCRILS--LKRREVQSEQKR---WRKHF-------FGPFDGILGSILTCQSCLSQI 241
+ R L+ E+ + + W+++ F G L S L CQ+C
Sbjct: 332 PVPSPPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQAC-GYR 390
Query: 242 SLDYQFF--HSLPLSPVLDSGSTIPFGCTLEDCLKQFLTAEQLENYHCSHCWHIAAIKYL 299
S ++ F SLP+ +G + +L DC F E+LE+ + C
Sbjct: 391 STTFEVFCDLSLPIPKKGFAGGKV----SLRDCFNLFTKEEELESENAPVC--------- 437
Query: 300 SITEANEMEIEELRRCSAQDSCNCRSRLHLETLPWSNKFSHTLKKLSISHCPQILCIHLQ 359
D C ++R + KKL++ P+IL +HL
Sbjct: 438 -------------------DRCRQKTR--------------STKKLTVQRFPRILVLHLN 464
Query: 360 RVSINEMGELVKIWGHIAFPL 380
R S + G + K + FPL
Sbjct: 465 RFSASR-GSIKKSSVGVDFPL 484
Score = 36.2 bits (82), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 16/76 (21%)
Query: 500 LYRLASVVEHFGRVGSGHYTVYRSVRVESHEENPNEHFETPLTHWFCISDSQVYSVSVND 559
+Y+L ++ H G V GHYT R + T W +DS+V VS N
Sbjct: 501 VYQLYALCNHSGSVHYGHYTAL--CRCQ--------------TGWHVYNDSRVSPVSENQ 544
Query: 560 VLAAEASLLFYERIIE 575
V ++E +LFY+ + E
Sbjct: 545 VASSEGYVLFYQLMQE 560
>sp|Q2KJ72|UBP21_BOVIN Ubiquitin carboxyl-terminal hydrolase 21 OS=Bos taurus GN=USP21
PE=2 SV=1
Length = 565
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 125/325 (38%), Gaps = 73/325 (22%)
Query: 76 GLQNLGNNCFLNVILQALASCTCF------LPFLQKVMGECEEPDEDLPLTVALASLLEE 129
GL+NLGN CFLN +LQ L+S F Q+V G + LT A A ++
Sbjct: 213 GLRNLGNTCFLNALLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQE----LTEAFADVIGA 268
Query: 130 LCLVGETRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYSPNESS 189
L V +P + + Y+ +F+ SQQDA+E LM L E
Sbjct: 269 LWHPDSCEAV-NPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPI 327
Query: 190 LVDAFEAASCRILS--LKRREVQSEQKR---WRKHF-------FGPFDGILGSILTCQSC 237
L + R+ L+ E+ + + W+++ F G L S L CQ+C
Sbjct: 328 LASSPAPHPPRLGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQAC 387
Query: 238 LSQISLDYQFF--HSLPLSPVLDSGSTIPFGCTLEDCLKQFLTAEQLENYHCSHCWHIAA 295
S ++ F SLP+ +G + +L DC F E+LE+ + C
Sbjct: 388 -GYRSTTFEVFCDLSLPIPKKGFAGGKV----SLRDCFNLFTKEEELESENAPVC----- 437
Query: 296 IKYLSITEANEMEIEELRRCSAQDSCNCRSRLHLETLPWSNKFSHTLKKLSISHCPQILC 355
D C ++R + KKL++ P+IL
Sbjct: 438 -----------------------DRCRQKTR--------------STKKLTVQRFPRILV 460
Query: 356 IHLQRVSINEMGELVKIWGHIAFPL 380
+HL R S + G + K + FPL
Sbjct: 461 LHLNRFSASR-GSIKKSSVGVDFPL 484
Score = 36.6 bits (83), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 16/76 (21%)
Query: 500 LYRLASVVEHFGRVGSGHYTVYRSVRVESHEENPNEHFETPLTHWFCISDSQVYSVSVND 559
+Y+L ++ H G V GHYT R + T W +DS+V VS N
Sbjct: 501 VYQLYALCNHSGSVHYGHYTAL--CRCQ--------------TGWHVYNDSRVSPVSENQ 544
Query: 560 VLAAEASLLFYERIIE 575
V ++E +LFY+ + E
Sbjct: 545 VASSEGYVLFYQLMQE 560
>sp|Q4R6D3|UBP50_MACFA Putative ubiquitin carboxyl-terminal hydrolase 50 OS=Macaca
fascicularis GN=USP50 PE=2 SV=1
Length = 373
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 126/327 (38%), Gaps = 85/327 (25%)
Query: 74 VPGLQNLGNNCFLNVILQALASCTCFL------PFLQKVMGECEEPDEDLPLTVALASLL 127
V GL+NLGN C++N ILQ L S + + ++ + +C E + A A L+
Sbjct: 43 VTGLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYITALQNDCSE------VATAFAYLM 96
Query: 128 EELCLVGETRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYSPNE 187
++ L G++ V SP+ A+ F +QQDA+E +++++ L E + + P
Sbjct: 97 TDMWL-GDSDCV-SPEIFRSALGNLYPAFTKKTQQDAQEFLIYVLNELHEALKKYHYPRR 154
Query: 188 SSLVDAFEAASCRILSLKRREVQSEQKRWRKHFFGPFDGILGSILTCQSCLSQISLDYQF 247
S CR V ++ F+G L + C C + + +
Sbjct: 155 RSHEKGSAQRCCRKWITTETSVITQL----------FEGQLNYSIVCLKC-EKCTYKNEV 203
Query: 248 FHSLPLSPVLDSGSTIP--FGCTLEDCLKQFLTAEQL---ENYHCSHCWHIAAIKYLSIT 302
F L L IP + C+L+DCL+ F + L HCS C
Sbjct: 204 FTVLSLP--------IPSEYECSLQDCLQCFFQQDTLTWNNQIHCSFC------------ 243
Query: 303 EANEMEIEELRRCSAQDSCNCRSRLHLETLPWSNKFSHTLKKLSISHCPQILCIHLQRVS 362
E + E T + IS P+I+ HL+R
Sbjct: 244 ---ETKQE------------------------------TAVRAGISKAPKIIIFHLKRFD 270
Query: 363 INEMGELVKIWGHIAFPLI-LDLFPFV 388
I + K+ I +PL LDL P++
Sbjct: 271 IQGTTKR-KLRTDIHYPLTNLDLTPYI 296
Score = 36.2 bits (82), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 14/70 (20%)
Query: 501 YRLASVVEHFGRVGSGHYTVYRSVRVESHEENPNEHFETPLTHWFCISDSQVYSVSVNDV 560
Y L +VV HFG + GHYT + W+ D++V + V
Sbjct: 306 YNLCAVVNHFGDLDGGHYTAFCKNSFTQ--------------AWYSFDDTRVSEIPDTSV 351
Query: 561 LAAEASLLFY 570
A A LLFY
Sbjct: 352 QNATAYLLFY 361
>sp|Q9FPT5|UBP1_ARATH Ubiquitin carboxyl-terminal hydrolase 1 OS=Arabidopsis thaliana
GN=UBP1 PE=1 SV=2
Length = 1083
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 500 LYRLASVVEHFGRVGSGHYTVYRSVRVESHEENPNEHFETPLTHWFCISDSQVYSVSVND 559
+YRLA +VEH G + GHY Y +R E ++ E + W+ SDSQV S+ +
Sbjct: 1012 VYRLAGLVEHLGAMSRGHYVSY--IRGGHKERRDSDTKEPNSSIWYHASDSQVRPASLEE 1069
Query: 560 VLAAEASLLFYERI 573
VL +EA +LFYERI
Sbjct: 1070 VLRSEAYILFYERI 1083
Score = 40.8 bits (94), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 343 KKLSISHCPQILCIHLQRVSINEMGELVKIWGHIAFPLILDLFPFVKS 390
KK+ I+ P +L IHL+R S + G + K+ GH+ F +DL ++ +
Sbjct: 956 KKVLINKAPPVLTIHLKRFSQDARGRVSKLSGHVDFQEFIDLSKYMDT 1003
Score = 34.3 bits (77), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 14/107 (13%)
Query: 74 VPGLQNLGNNCFLNVILQALASCTCFLPFLQKVMGECEEPDEDLPLTVALASLLEELCLV 133
V GL NLGN CF N ++Q L S K EDL ++ L S L+EL
Sbjct: 201 VRGLVNLGNTCFFNSVMQNLLSLDQLREHFLK---------EDLSVSGPLVSSLKELFAE 251
Query: 134 GET-----RLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSL 175
+ R ++P+ + ++ F Q D+ E L+ L
Sbjct: 252 SNSEASVFRNEINPRDLFFSVCSQAPQFRGYQQHDSHELLRCLLDGL 298
>sp|Q70EK9|UBP51_HUMAN Ubiquitin carboxyl-terminal hydrolase 51 OS=Homo sapiens GN=USP51
PE=2 SV=1
Length = 711
Score = 59.3 bits (142), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 123/317 (38%), Gaps = 55/317 (17%)
Query: 76 GLQNLGNNCFLNVILQALASCTCFLPFLQKVMGECEEPDEDLPLTVALASLLEELCLVGE 135
GL NLGN CF+N I+QAL F +C L L ++SL +
Sbjct: 364 GLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIMTSPSLCLVCEMSSLFH--AMYSG 421
Query: 136 TRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYSPNESSLVDAFE 195
+R P K++ + ++ ++ QQDA E + ++ + L +S ++S +A
Sbjct: 422 SRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAIL-----DVLHRHSKDDSGGQEANN 476
Query: 196 AASCRILSLKRREVQSEQKRWRKHFFGPFDGILGSILTCQSCLSQISLDYQFFHSLPLSP 255
C + F G L S +TCQ+C S S + P
Sbjct: 477 PNCCNCI-----------------IDQIFTGGLQSDVTCQACHSV---------STTIDP 510
Query: 256 VLDSGSTIPFGCTLEDCLKQFLTAEQLENYHCSHCWHIAAIKYLSITEANEMEIEELRRC 315
D +P C D + + S HI I L+ E L
Sbjct: 511 CWDISLDLPGSCATFDSQN-----PERADSTVSRDDHIPGIPSLTDCLQWFTRPEHLGS- 564
Query: 316 SAQDSCN-CRSRLHLETLPWSNKFSHTLKKLSISHCPQILCIHLQRVSINEMG-ELVKIW 373
SA+ CN C+S + + K+L++ P + C HL+R +G + KI
Sbjct: 565 SAKIKCNSCQS------------YQESTKQLTMKKLPIVACFHLKR--FEHVGKQRRKIN 610
Query: 374 GHIAFPLILDLFPFVKS 390
I+FPL LD+ PF+ S
Sbjct: 611 TFISFPLELDMTPFLAS 627
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 15/79 (18%)
Query: 494 CQPNTYLYRLASVVEHFGRVGSGHYTVYRSVRVESHEENPNEHFETPLTHWFCISDSQVY 553
C PN Y L +V+ H G + SGHYT + +R + + WF D+ +
Sbjct: 642 CVPNENKYSLFAVINHHGTLESGHYTSF--IRQQKDQ-------------WFSCDDAIIT 686
Query: 554 SVSVNDVLAAEASLLFYER 572
++ D+L +E LLFY +
Sbjct: 687 KATIEDLLYSEGYLLFYHK 705
>sp|Q5DU02|UBP22_MOUSE Ubiquitin carboxyl-terminal hydrolase 22 OS=Mus musculus GN=Usp22
PE=2 SV=2
Length = 525
Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 139/371 (37%), Gaps = 93/371 (25%)
Query: 76 GLQNLGNNCFLNVILQALASCTCFLPFLQKVMGECEEPDEDLPLTVALASLLEELCLVGE 135
GL NLGN CF+N I+QAL F CE L ++SL +E
Sbjct: 177 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQE--FYSG 234
Query: 136 TRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYSPNESSLVDAFE 195
R P K++ + + ++ QQDA E L+++L + L + + + A
Sbjct: 235 HRSPHIPYKLLHLVWTHARHLAGYEQQDAHEF---LIAAL--DVLHRHCKGDDNGKKANN 289
Query: 196 AASCRILSLKRREVQSEQKRWRKHFFGPFDGILGSILTCQSC---------LSQISLDYQ 246
C + + F G L S +TCQ C ISLD
Sbjct: 290 PNHCNCIIDQ-----------------IFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLP 332
Query: 247 FFHS--LPLSP-----VLDSGSTIPFGCTLEDCLKQFLTAEQLENYHCSHCWHIAAIKYL 299
+ PLSP V++ S TL DCL++F E L + A IK
Sbjct: 333 GSSTPFWPLSPGSEGSVVNGESHASGTTTLTDCLRRFTRPEHLGSS--------AKIK-- 382
Query: 300 SITEANEMEIEELRRCSAQDSCNCRSRLHLETLPWSNKFSHTLKKLSISHCPQILCIHLQ 359
CS C S + + K+L++ P + C HL+
Sbjct: 383 ---------------CSG-----CHS------------YQESTKQLTMKKLPIVACFHLK 410
Query: 360 RVSINEMGELVKIWGHIAFPLILDLFPFVKSGVGINDLDESWQRGQAKVLNERPSSSLNH 419
R + KI +++FPL LD+ PF+ S ES GQ ++P SLN+
Sbjct: 411 RFE-HSAKLRRKITTYVSFPLELDMTPFMASS------KESRMNGQY----QQPLDSLNN 459
Query: 420 VNRKYDAKVLN 430
N+ V+N
Sbjct: 460 DNKYSLFAVVN 470
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 15/76 (19%)
Query: 497 NTYLYRLASVVEHFGRVGSGHYTVYRSVRVESHEENPNEHFETPLTHWFCISDSQVYSVS 556
N Y L +VV H G + SGHYT + + H++ WF D+ + S
Sbjct: 459 NDNKYSLFAVVNHQGTLESGHYTSF----IRQHKDQ-----------WFKCDDAIITKAS 503
Query: 557 VNDVLAAEASLLFYER 572
+ DVL +E LLFY +
Sbjct: 504 IKDVLDSEGYLLFYHK 519
>sp|A5D9H7|UBP12_BOVIN Ubiquitin carboxyl-terminal hydrolase 12 OS=Bos taurus GN=USP12
PE=2 SV=1
Length = 369
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 115/313 (36%), Gaps = 69/313 (22%)
Query: 76 GLQNLGNNCFLNVILQALASCTCFLPFLQKVMGECEEPDEDLPLTVALASLLEELCLVGE 135
GL N GN C+ N +LQAL C PF +KV+ +P + L LA L + +
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCR---PFREKVLAYKSQPRKKESLLTCLADLFHSIATQKK 96
Query: 136 TRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYSPNESSLVDAFE 195
V+ P+K + + + F+ QQDA E +L++++ + E E
Sbjct: 97 KVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQ---------E 147
Query: 196 AASCRIL--SLKRREVQSEQKRWRKHFFGPFDGILGSILTCQSCLSQISLDYQFFHSLPL 253
+ R+ ++ + W F G L + C +C + S D F
Sbjct: 148 KQNGRLPNGNIDSENNSTPDPTWVHEI---FQGTLTNETRCLTCETISSKDEDF------ 198
Query: 254 SPVLDSGSTIPFGCTLEDCLKQFLTAEQLENYHCSHCWHIAAIKYLSITEANEMEIEELR 313
LD + ++ CL+ F E L + + +C
Sbjct: 199 ---LDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYC----------------------- 232
Query: 314 RCSAQDSCNCRSRLHLETLPWSNKFSHTLKKLSISHCPQILCIHLQRVS-INEMGELVKI 372
+ C + H K++ + P IL +HL+R ++++ K+
Sbjct: 233 -----EECRSKQEAH--------------KRMKVKKLPMILALHLKRFKYMDQLHRYTKL 273
Query: 373 WGHIAFPLILDLF 385
+ FPL L LF
Sbjct: 274 SYRVVFPLELRLF 286
>sp|Q9D9M2|UBP12_MOUSE Ubiquitin carboxyl-terminal hydrolase 12 OS=Mus musculus GN=Usp12
PE=2 SV=2
Length = 370
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 117/317 (36%), Gaps = 76/317 (23%)
Query: 76 GLQNLGNNCFLNVILQALASCTCFLPFLQKVMGECEEPDEDLPLTVALASLLEELCLVGE 135
GL N GN C+ N +LQAL C PF +KV+ +P + L LA L + +
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCR---PFREKVLAYKSQPRKKENLLTCLADLFHSIATQKK 96
Query: 136 TRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYSPNESSLVDAFE 195
V+ P+K + + + F+ QQDA E +L++++ + E E
Sbjct: 97 KVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQ---------E 147
Query: 196 AASCRILSLKRREVQSEQKR------WRKHFFGPFDGILGSILTCQSCLSQISLDYQFFH 249
+ R L+ +V +E W F G L + C +C + S D F
Sbjct: 148 KQNGR---LRNGDVDNEDNNSTPDPTWVHEI---FQGTLTNETRCLTCETISSKDEDF-- 199
Query: 250 SLPLSPVLDSGSTIPFGCTLEDCLKQFLTAEQLENYHCSHCWHIAAIKYLSITEANEMEI 309
LD + ++ CL+ F E L + + +C
Sbjct: 200 -------LDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYC------------------- 233
Query: 310 EELRRCSAQDSCNCRSRLHLETLPWSNKFSHTLKKLSISHCPQILCIHLQRVS-INEMGE 368
+ C + H K++ + P IL +HL+R ++++
Sbjct: 234 ---------EECRSKQEAH--------------KRMKVKKLPLILALHLKRFKYMDQLHR 270
Query: 369 LVKIWGHIAFPLILDLF 385
K+ + FPL L LF
Sbjct: 271 YTKLSYRVVFPLELRLF 287
>sp|A6H8I0|UBP22_DANRE Ubiquitin carboxyl-terminal hydrolase 22 OS=Danio rerio GN=usp22
PE=2 SV=1
Length = 506
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 137/371 (36%), Gaps = 95/371 (25%)
Query: 76 GLQNLGNNCFLNVILQALASCTCFLPFLQKVMGECEEPDEDLPLTVALASLLEELCLVGE 135
GL NLGN CF+N I+QAL F +CE L ++ L +E
Sbjct: 160 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSNSC-LVCEMSQLFQEF--YSG 216
Query: 136 TRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYSPNESSLVDAFE 195
R P +++ + + ++ QQDA E + + L + + +
Sbjct: 217 HRSPHIPFRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKD----DNGKKANNPN 272
Query: 196 AASCRILSLKRREVQSEQKRWRKHFFGPFDGILGSILTCQSC---------LSQISLDYQ 246
+C I + F G L S +TCQ C ISLD
Sbjct: 273 HCNCIIDQI-------------------FTGGLQSDVTCQVCHGVSTTIDPFWDISLDLP 313
Query: 247 FFHS--LPLSPVLD----SGSTIPFGCT-LEDCLKQFLTAEQLENYHCSHCWHIAAIKYL 299
+ PLSP D +G + P G T L DCL++F E L + A IK
Sbjct: 314 GSSTPFWPLSPGSDGSVVNGDSHPSGATTLTDCLRRFTRPEHLGSS--------AKIK-- 363
Query: 300 SITEANEMEIEELRRCSAQDSCNCRSRLHLETLPWSNKFSHTLKKLSISHCPQILCIHLQ 359
CS C S + + K+L++ P + C HL+
Sbjct: 364 ---------------CSG-----CHS------------YQESTKQLTMKRLPIVACFHLK 391
Query: 360 RVSINEMGELVKIWGHIAFPLILDLFPFVKSGVGINDLDESWQRGQAKVLNERPSSSLNH 419
R + KI +++FPL LD+ PF+ S ES GQ ++P SLN+
Sbjct: 392 RFE-HSAKLRRKITTYVSFPLELDMTPFMASS------KESRMNGQY----QQPVDSLNN 440
Query: 420 VNRKYDAKVLN 430
N+ V+N
Sbjct: 441 DNKYSLFAVVN 451
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 15/76 (19%)
Query: 497 NTYLYRLASVVEHFGRVGSGHYTVYRSVRVESHEENPNEHFETPLTHWFCISDSQVYSVS 556
N Y L +VV H G + SGHYT + + H++ WF D+ + S
Sbjct: 440 NDNKYSLFAVVNHQGTLESGHYTTF----IRQHKDQ-----------WFKCDDAIITKAS 484
Query: 557 VNDVLAAEASLLFYER 572
+ DVL +E LLFY +
Sbjct: 485 IKDVLDSEGYLLFYHK 500
>sp|Q5RBQ4|UBP46_PONAB Ubiquitin carboxyl-terminal hydrolase 46 OS=Pongo abelii GN=USP46
PE=2 SV=1
Length = 366
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 116/326 (35%), Gaps = 70/326 (21%)
Query: 76 GLQNLGNNCFLNVILQALASCTCFLPFLQKVMGECEEPDEDLPLTVALASLLEELCLVGE 135
GL N GN C+ N +LQAL C PF + V+ + + L LA L + +
Sbjct: 36 GLVNFGNTCYCNSVLQALYFCR---PFRENVLAYKAQQKKKENLLTCLADLFHSIATQKK 92
Query: 136 TRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYSPNESSLVDAFE 195
V+ P+K + + F+ QQDA E +L++++ + E E
Sbjct: 93 KVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQ---------E 143
Query: 196 AASCRILSLKRREVQSEQKRWRKHFFGPFDGILGSILTCQSCLSQISLDYQFFHSLPLSP 255
+ ++ + E K F G L + C +C + S D F
Sbjct: 144 KQNGKLKNGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDF-------- 195
Query: 256 VLDSGSTIPFGCTLEDCLKQFLTAEQL---ENYHCSHCWHIAAIKYLSITEANEMEIEEL 312
LD + ++ CL+ F E L + Y+C C
Sbjct: 196 -LDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETC---------------------- 232
Query: 313 RRCSAQDSCNCRSRLHLETLPWSNKFSHTLKKLSISHCPQILCIHLQRVS-INEMGELVK 371
CS Q++ K++ + P IL +HL+R + ++ K
Sbjct: 233 --CSKQEA---------------------QKRMRVKKLPMILALHLKRFKYMEQLHRYTK 269
Query: 372 IWGHIAFPLILDLFPFVKSGVGINDL 397
+ + FPL L LF V ++ +
Sbjct: 270 LSYRVVFPLELRLFNTSSDAVNLDRM 295
>sp|P62069|UBP46_MOUSE Ubiquitin carboxyl-terminal hydrolase 46 OS=Mus musculus GN=Usp46
PE=1 SV=1
Length = 366
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 116/326 (35%), Gaps = 70/326 (21%)
Query: 76 GLQNLGNNCFLNVILQALASCTCFLPFLQKVMGECEEPDEDLPLTVALASLLEELCLVGE 135
GL N GN C+ N +LQAL C PF + V+ + + L LA L + +
Sbjct: 36 GLVNFGNTCYCNSVLQALYFCR---PFRENVLAYKAQQKKKENLLTCLADLFHSIATQKK 92
Query: 136 TRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYSPNESSLVDAFE 195
V+ P+K + + F+ QQDA E +L++++ + E E
Sbjct: 93 KVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQ---------E 143
Query: 196 AASCRILSLKRREVQSEQKRWRKHFFGPFDGILGSILTCQSCLSQISLDYQFFHSLPLSP 255
+ ++ + E K F G L + C +C + S D F
Sbjct: 144 KQNGKLKNGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDF-------- 195
Query: 256 VLDSGSTIPFGCTLEDCLKQFLTAEQL---ENYHCSHCWHIAAIKYLSITEANEMEIEEL 312
LD + ++ CL+ F E L + Y+C C
Sbjct: 196 -LDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETC---------------------- 232
Query: 313 RRCSAQDSCNCRSRLHLETLPWSNKFSHTLKKLSISHCPQILCIHLQRVS-INEMGELVK 371
CS Q++ K++ + P IL +HL+R + ++ K
Sbjct: 233 --CSKQEA---------------------QKRMRVKKLPMILALHLKRFKYMEQLHRYTK 269
Query: 372 IWGHIAFPLILDLFPFVKSGVGINDL 397
+ + FPL L LF V ++ +
Sbjct: 270 LSYRVVFPLELRLFNTSSDAVNLDRM 295
>sp|P62068|UBP46_HUMAN Ubiquitin carboxyl-terminal hydrolase 46 OS=Homo sapiens GN=USP46
PE=1 SV=1
Length = 366
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 116/326 (35%), Gaps = 70/326 (21%)
Query: 76 GLQNLGNNCFLNVILQALASCTCFLPFLQKVMGECEEPDEDLPLTVALASLLEELCLVGE 135
GL N GN C+ N +LQAL C PF + V+ + + L LA L + +
Sbjct: 36 GLVNFGNTCYCNSVLQALYFCR---PFRENVLAYKAQQKKKENLLTCLADLFHSIATQKK 92
Query: 136 TRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYSPNESSLVDAFE 195
V+ P+K + + F+ QQDA E +L++++ + E E
Sbjct: 93 KVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQ---------E 143
Query: 196 AASCRILSLKRREVQSEQKRWRKHFFGPFDGILGSILTCQSCLSQISLDYQFFHSLPLSP 255
+ ++ + E K F G L + C +C + S D F
Sbjct: 144 KQNGKLKNGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDF-------- 195
Query: 256 VLDSGSTIPFGCTLEDCLKQFLTAEQL---ENYHCSHCWHIAAIKYLSITEANEMEIEEL 312
LD + ++ CL+ F E L + Y+C C
Sbjct: 196 -LDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETC---------------------- 232
Query: 313 RRCSAQDSCNCRSRLHLETLPWSNKFSHTLKKLSISHCPQILCIHLQRVS-INEMGELVK 371
CS Q++ K++ + P IL +HL+R + ++ K
Sbjct: 233 --CSKQEA---------------------QKRMRVKKLPMILALHLKRFKYMEQLHRYTK 269
Query: 372 IWGHIAFPLILDLFPFVKSGVGINDL 397
+ + FPL L LF V ++ +
Sbjct: 270 LSYRVVFPLELRLFNTSSDAVNLDRM 295
>sp|C0HB46|UBP12_SALSA Ubiquitin carboxyl-terminal hydrolase 12 OS=Salmo salar GN=usp12
PE=2 SV=1
Length = 372
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 113/311 (36%), Gaps = 62/311 (19%)
Query: 76 GLQNLGNNCFLNVILQALASCTCFLPFLQKVMGECEEPDEDLPLTVALASLLEELCLVGE 135
GL N GN C+ N +LQAL C PF +K++ +P L LA L +
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCR---PFREKILAYRSQPRRKENLLTCLADLFHSIANQKR 96
Query: 136 TRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYSPNESSLVDAFE 195
V+ P+K + + + F+ QQDA E +L++++ + E ++++
Sbjct: 97 KVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEERKQDKTN----GR 152
Query: 196 AASCRILSLKRREVQSEQKRWRKHFFGPFDGILGSILTCQSCLSQISLDYQFFHSLPLSP 255
A+ + S W F G L + C +C + S D F
Sbjct: 153 LANGSLDSQNHNSNAPPPSTWVHEI---FQGTLTNETRCLTCETISSKDEDF-------- 201
Query: 256 VLDSGSTIPFGCTLEDCLKQFLTAEQLENYHCSHCWHIAAIKYLSITEANEMEIEELRRC 315
LD + ++ CL+ F E L + + +C
Sbjct: 202 -LDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYC------------------------- 235
Query: 316 SAQDSCNCRSRLHLETLPWSNKFSHTLKKLSISHCPQILCIHLQRVS-INEMGELVKIWG 374
+ C + H K++ + P IL +HL+R + ++ K+
Sbjct: 236 ---EECRSKQEAH--------------KRMRVKKLPMILALHLKRFKYMEQLQRYTKLSY 278
Query: 375 HIAFPLILDLF 385
+ FPL L LF
Sbjct: 279 RVVFPLELRLF 289
>sp|O75317|UBP12_HUMAN Ubiquitin carboxyl-terminal hydrolase 12 OS=Homo sapiens GN=USP12
PE=1 SV=2
Length = 370
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 113/314 (35%), Gaps = 70/314 (22%)
Query: 76 GLQNLGNNCFLNVILQALASCTCFLPFLQKVMGECEEPDEDLPLTVALASLLEELCLVGE 135
GL N GN C+ N +LQAL C PF +KV+ +P + L LA L + +
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCR---PFREKVLAYKSQPRKKESLLTCLADLFHSIATQKK 96
Query: 136 TRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYSPNESSLVDAFE 195
V+ P+K + + + F+ QQDA E +L++++ + E E
Sbjct: 97 KVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQ---------E 147
Query: 196 AASCRI---LSLKRREVQSEQKRWRKHFFGPFDGILGSILTCQSCLSQISLDYQFFHSLP 252
+ R+ + W F G L + C +C + S D F
Sbjct: 148 KQNGRLPNGNIDNENNNSTPDPTWVHEI---FQGTLTNETRCLTCETISSKDEDF----- 199
Query: 253 LSPVLDSGSTIPFGCTLEDCLKQFLTAEQLENYHCSHCWHIAAIKYLSITEANEMEIEEL 312
LD + ++ CL+ F E L + + +C
Sbjct: 200 ----LDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYC---------------------- 233
Query: 313 RRCSAQDSCNCRSRLHLETLPWSNKFSHTLKKLSISHCPQILCIHLQRVS-INEMGELVK 371
+ C + H K++ + P IL +HL+R ++++ K
Sbjct: 234 ------EECRSKQEAH--------------KRMKVKKLPMILALHLKRFKYMDQLHRYTK 273
Query: 372 IWGHIAFPLILDLF 385
+ + FPL L LF
Sbjct: 274 LSYRVVFPLELRLF 287
>sp|Q6PAW2|UBP16_XENLA Ubiquitin carboxyl-terminal hydrolase 16 OS=Xenopus laevis GN=usp16
PE=2 SV=1
Length = 901
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 21/90 (23%)
Query: 500 LYRLASVVEHFGRVGSGHYTVYRSVRVESHEENPNEHF---------------ETPLTHW 544
LY L V+EH G + SGHYT + +R +PN+ E W
Sbjct: 818 LYSLYGVIEHSGSMRSGHYTAFVKLR------HPNQQLCKMLFTGVIPEVSGSEPGQGSW 871
Query: 545 FCISDSQVYSVSVNDVLAAEASLLFYERII 574
+ ISDS V +VS++ VL+++A LLFYER++
Sbjct: 872 YHISDSHVQAVSLSRVLSSQAYLLFYERML 901
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 42/224 (18%)
Query: 63 EKENRLEKLCLVP---GLQNLGNNCFLNVILQALASCTCFLPFLQKV----------MGE 109
EK + +K+ P GL NLGN CF N ++Q L+ L +V + +
Sbjct: 182 EKASSTQKISTEPTVKGLSNLGNTCFFNAVMQNLSQTPALSELLNEVKTFRKPVTVLLPD 241
Query: 110 CEEP--------DEDLPLTVALASLLEELCLVGETRL-VLSPQKVMLAMELYIQNFNLTS 160
P + PLT+A+ L E+ ET+ V++P+++ + F
Sbjct: 242 SSSPKILEVNLEQQPGPLTLAMWQFLTEM---HETKKGVVTPKELFSQVCKKAIRFKGYQ 298
Query: 161 QQDAEEAFLHLMSSLREEFLESYSPNESSLVDAFEAASCRILSLKRREVQSEQKRWRKHF 220
QQD++E +L+ +R E ++ + S + + +L E++ K + K
Sbjct: 299 QQDSQELLRYLLDGMRGEEIQRVTLAMSKSLQS---------TLDEEEIKKIVKDYEKRR 349
Query: 221 FGP------FDGILGSILTCQSCLSQISLDYQFFHSLPLSPVLD 258
P F G L S + C+ C + +SL ++ F L L PVLD
Sbjct: 350 TIPNFVDCLFGGELTSTIMCEECHT-VSLVHEPFLDLSL-PVLD 391
Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 321 CNCRSRLHLETLPWSNK------FSHTLKKLSISHCPQILCIHLQRVSINEMGELVKIWG 374
CN +R L SNK +++ K++ +S+ IL +HL+R N L KI
Sbjct: 731 CNVCTRKQASRLNNSNKGEKKFVYTNAKKQMLVSNPSPILTLHLKRFQQNGFN-LRKINR 789
Query: 375 HIAFPLILDLFPF 387
HI FP +LDL PF
Sbjct: 790 HIKFPEVLDLAPF 802
>sp|Q0VA64|UBP16_XENTR Ubiquitin carboxyl-terminal hydrolase 16 OS=Xenopus tropicalis
GN=usp16 PE=2 SV=1
Length = 864
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 21/90 (23%)
Query: 500 LYRLASVVEHFGRVGSGHYTVYRSVRVESHEENPNEHF---------------ETPLTHW 544
LY L V+EH G + SGHYT + +R PN+ E W
Sbjct: 781 LYSLYGVIEHSGSMRSGHYTAFVKLR------RPNQQLCEMVLKGVIPEVSGSEPGQGSW 834
Query: 545 FCISDSQVYSVSVNDVLAAEASLLFYERII 574
+ ISDS V +VS++ VL+++A LLFYER++
Sbjct: 835 YHISDSHVQAVSLSRVLSSQAYLLFYERML 864
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 43/212 (20%)
Query: 74 VPGLQNLGNNCFLNVILQALASCTCFLPFLQKVMGECEE---------PD---------- 114
V GL NLGN CF N ++Q L+ P +++++ E + PD
Sbjct: 195 VKGLSNLGNTCFFNAVMQNLSQT----PAVRELLNEAKTLKKPVTVPLPDSSSPTNVEVH 250
Query: 115 ---EDLPLTVALASLLEELCLVGETRL-VLSPQKVMLAMELYIQNFNLTSQQDAEEAFLH 170
+ PLT+A+ L E+ ET+ V++P++V + F QQD++E +
Sbjct: 251 LEQQPGPLTLAMWQFLTEM---QETKKGVVTPKEVFSQVCKKAIRFKGYQQQDSQELLRY 307
Query: 171 LMSSLREEFLE----SYSPNESSLVDAFEAASCRILSLKRREVQSEQKRWRKHFFGPFDG 226
L+ +R E ++ + S + + +D E S KRR + + + H FG G
Sbjct: 308 LLDGMRGEEIQRVSLAMSKSLQNTLDEEEIKKIVKDSEKRRTIPN----FVDHLFG---G 360
Query: 227 ILGSILTCQSCLSQISLDYQFFHSLPLSPVLD 258
L S + C+ C + +SL ++ F L L PVLD
Sbjct: 361 ELTSTIMCEECHT-VSLVHEPFLDLSL-PVLD 390
Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 321 CNCRSRLHLETLPWSNK------FSHTLKKLSISHCPQILCIHLQRVSINEMGELVKIWG 374
CN +R L SNK +++ K++ +S IL +HL+R N L KI
Sbjct: 694 CNVCTRKQASRLNNSNKGEKKFVYTNAKKQMLVSDPSPILTLHLKRFQQNGFN-LRKINR 752
Query: 375 HIAFPLILDLFPFVKS 390
HI FP +LDL PF S
Sbjct: 753 HIKFPEVLDLAPFCTS 768
>sp|Q52KZ6|UB12A_XENLA Ubiquitin carboxyl-terminal hydrolase 12-A OS=Xenopus laevis
GN=usp12-a PE=2 SV=1
Length = 370
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 113/314 (35%), Gaps = 70/314 (22%)
Query: 76 GLQNLGNNCFLNVILQALASCTCFLPFLQKVMGECEEPDEDLPLTVALASLLEELCLVGE 135
GL N GN C+ N +LQAL C PF +KV+ +P + L L+ L + +
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCR---PFREKVLAYKSQPRKKENLLTCLSDLFHSIATQKK 96
Query: 136 TRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYSPNESSLVDAFE 195
V+ P+K + + + F+ QQDA E +L++++ + E E
Sbjct: 97 KVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQ---------E 147
Query: 196 AASCRI---LSLKRREVQSEQKRWRKHFFGPFDGILGSILTCQSCLSQISLDYQFFHSLP 252
+ RI + W F G L + C +C + S D F
Sbjct: 148 KQNGRIPNGNIDNENNNSAPDPTWVHEI---FQGTLTNETRCLTCETISSKDEDF----- 199
Query: 253 LSPVLDSGSTIPFGCTLEDCLKQFLTAEQLENYHCSHCWHIAAIKYLSITEANEMEIEEL 312
LD + ++ CL+ F E L + + +C
Sbjct: 200 ----LDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYC---------------------- 233
Query: 313 RRCSAQDSCNCRSRLHLETLPWSNKFSHTLKKLSISHCPQILCIHLQRVS-INEMGELVK 371
+ C + H K++ + P IL +HL+R ++++ K
Sbjct: 234 ------EECRSKQEAH--------------KRMKVKKLPMILALHLKRFKYMDQLHRYTK 273
Query: 372 IWGHIAFPLILDLF 385
+ + FPL L LF
Sbjct: 274 LSYRVVFPLELRLF 287
>sp|Q5M981|UB12B_XENLA Ubiquitin carboxyl-terminal hydrolase 12-B OS=Xenopus laevis
GN=usp12-b PE=2 SV=2
Length = 370
Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 113/314 (35%), Gaps = 70/314 (22%)
Query: 76 GLQNLGNNCFLNVILQALASCTCFLPFLQKVMGECEEPDEDLPLTVALASLLEELCLVGE 135
GL N GN C+ N +LQAL C PF +KV+ +P + L L+ L + +
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCR---PFREKVLAYKSQPRKKENLLTCLSDLFHSIATQKK 96
Query: 136 TRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYSPNESSLVDAFE 195
V+ P+K + + + F+ QQDA E +L++++ + E E
Sbjct: 97 KVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQ---------E 147
Query: 196 AASCRI---LSLKRREVQSEQKRWRKHFFGPFDGILGSILTCQSCLSQISLDYQFFHSLP 252
+ RI + W F G L + C +C + S D F
Sbjct: 148 KQNGRIPNGNIDNENNNNTPDPTWVHEI---FQGTLTNETRCLTCETISSKDEDF----- 199
Query: 253 LSPVLDSGSTIPFGCTLEDCLKQFLTAEQLENYHCSHCWHIAAIKYLSITEANEMEIEEL 312
LD + ++ CL+ F E L + + +C
Sbjct: 200 ----LDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYC---------------------- 233
Query: 313 RRCSAQDSCNCRSRLHLETLPWSNKFSHTLKKLSISHCPQILCIHLQRVS-INEMGELVK 371
+ C + H K++ + P IL +HL+R ++++ K
Sbjct: 234 ------EECRSKQEAH--------------KRMKVKKLPMILALHLKRFKYMDQLHRYTK 273
Query: 372 IWGHIAFPLILDLF 385
+ + FPL L LF
Sbjct: 274 LSYRVVFPLELRLF 287
>sp|Q8LAM0|UBP4_ARATH Ubiquitin carboxyl-terminal hydrolase 4 OS=Arabidopsis thaliana
GN=UBP4 PE=1 SV=2
Length = 365
Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 128/329 (38%), Gaps = 71/329 (21%)
Query: 76 GLQNLGNNCFLNVILQALASCTCFLPFLQKVMGEC--EEPDEDLPLTVALASLLEELCLV 133
G +N GN C+ N +LQAL C PF ++++ + D + L LA L ++
Sbjct: 24 GFENFGNTCYCNSVLQALYFCA---PFREQLLEHYANNKADAEENLLTCLADLFSQISSQ 80
Query: 134 GETRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLRE----EFLESYSPNESS 189
+ V++P++ + ++ + F QDA E +L++ L E E + + NE+S
Sbjct: 81 KKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNELVEILEKETQATKADNETS 140
Query: 190 LVDAFEAASCRILSLKRREVQSEQKRWRKHFFGPFDGILGSILTCQSCLSQISLDYQFFH 249
+ E + + + V E H F GIL + C C + + D F
Sbjct: 141 --SSPEKIANVLKAPLANGVHKEPIVTWVH--KIFQGILTNETRCLRCETVTARDETF-- 194
Query: 250 SLPLSPVLDSGSTIPFGCTLEDCLKQFLTAEQL---ENYHCSHCWHIAAIKYLSITEANE 306
L LS ++ S+I CLK F + E L + + C C
Sbjct: 195 -LDLSLDIEQNSSIT------SCLKNFSSTETLHAEDKFFCDKC---------------- 231
Query: 307 MEIEELRRCSAQDSCNCRSRLHLETLPWSNKFSHTLKKLSISHCPQILCIHLQRVS-INE 365
CS Q++ K++ I P IL IHL+R + +
Sbjct: 232 --------CSLQEA---------------------QKRMKIKKPPHILVIHLKRFKYMEQ 262
Query: 366 MGELVKIWGHIAFPLILDLFPFVKSGVGI 394
+G K+ + FPL L L V V I
Sbjct: 263 LGRYKKLSYRVVFPLELKLSNTVDEYVDI 291
>sp|Q9FPS4|UBP23_ARATH Ubiquitin carboxyl-terminal hydrolase 23 OS=Arabidopsis thaliana
GN=UBP23 PE=2 SV=2
Length = 859
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 103/259 (39%), Gaps = 57/259 (22%)
Query: 76 GLQNLGNNCFLNVILQALASCTCFLPFLQK--------VMGECEEPDEDLPLTVALASLL 127
GLQNLGN CFLN +LQ L LQ V G C AL ++
Sbjct: 108 GLQNLGNTCFLNSVLQCLTYTEPLAATLQTAAHQKYCHVAGFC-----------ALCAIQ 156
Query: 128 EELCLVGETR-LVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYSPN 186
+ + + +L+P+ ++ + +NF Q+DA E ++L+ + + L S P+
Sbjct: 157 KHVRTARQANGRILAPKDLVSNLRCISRNFRNCRQEDAHEYMINLLECMHKCSLPSGVPS 216
Query: 187 ESSLVDAFEAASCRILSLKRREVQSEQKRWRKHFFGPFDGILGSILTCQSCLSQISLDYQ 246
ESS DA+ R F G L S + C+ C S S +
Sbjct: 217 ESS--DAYR---------------------RSLVHKIFGGSLRSQVKCEQC-SHCSNKFD 252
Query: 247 FFHSLPLSPVLDSGSTIPFGCTLEDCLKQFLTAEQLEN----YHCSHCWH-IAAIKYLSI 301
P LD I +L+ L +F E L+N Y C C + A K L++
Sbjct: 253 --------PFLDLSLDISKADSLQRALSRFTAVELLDNGAKVYQCERCKQKVKAKKQLTV 304
Query: 302 TEANEMEIEELRRCSAQDS 320
++A + L+R A S
Sbjct: 305 SKAPYVLTVHLKRFEAHRS 323
Score = 35.8 bits (81), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 16/73 (21%)
Query: 501 YRLASVVEHFGRVG-SGHYTVYRSVRVESHEENPNEHFETPLTHWFCISDSQVYSVSVND 559
Y L V+ H+GR SGHY + VR S W+ + D++V VS
Sbjct: 352 YTLYGVLVHYGRSSHSGHYACF--VRTSS-------------GMWYSLDDNRVVQVSEKT 396
Query: 560 VLAAEASLLFYER 572
V +A +LFY R
Sbjct: 397 VFNQKAYMLFYVR 409
>sp|A5WWB0|UBP46_DANRE Ubiquitin carboxyl-terminal hydrolase 46 OS=Danio rerio GN=usp46
PE=3 SV=2
Length = 370
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 137/382 (35%), Gaps = 85/382 (22%)
Query: 76 GLQNLGNNCFLNVILQALASCTCFLPFLQKVMGECEEPDEDLPLTVALASLLEELCLVGE 135
GL N GN C+ N +LQAL C PF + V+ + + L LA L + +
Sbjct: 36 GLVNFGNTCYCNSVLQALYFCR---PFRENVLAYKVQQKKKENLLTCLADLFHSIATQKK 92
Query: 136 TRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYSPNESSLVDAFE 195
V+ P+K + + F+ QQDA E +L++++ + E + + +
Sbjct: 93 KVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTVADILQEERKQEKQN--GRLK 150
Query: 196 AASCRILSLKRREVQSEQKRWRKHFFGPFDGILGSILTCQSCLSQISLDYQFFHSLPLSP 255
I + E W F G L + C +C + S D F L LS
Sbjct: 151 NNGTAIATDTEPEQNKIDPTWVHEI---FQGTLTNETRCLNCETVSSKDEDF---LDLSV 204
Query: 256 VLDSGSTIPFGCTLEDCLKQFLTAEQL---ENYHCSHCWHIAAIKYLSITEANEMEIEEL 312
++ ++I CL+ F E L Y+C C
Sbjct: 205 DVEQNTSITH------CLRDFSNTETLCSEYKYYCEMC---------------------- 236
Query: 313 RRCSAQDSCNCRSRLHLETLPWSNKFSHTLKKLSISHCPQILCIHLQRVS-INEMGELVK 371
CS Q++ K++ + P IL +HL+R + ++ K
Sbjct: 237 --CSKQEA---------------------QKRMRVKKLPMILALHLKRFKYMEQLHRYTK 273
Query: 372 IWGHIAFPLILDLFPFVKSGVGINDLDESW-------------QRGQAKVLNERPSSSL- 417
+ + FPL L LF SG +N LD + RG + + L
Sbjct: 274 LSYRVVFPLELRLFN--TSGDAVN-LDRMYDLVAVVVHCGSGPNRGHYITIVKSHGFWLL 330
Query: 418 --NHVNRKYDAKVLNSIYGLTG 437
+ + K DA+ + YGLT
Sbjct: 331 FDDDIVEKIDAQAIEEFYGLTS 352
>sp|Q8W4N3|UBP2_ARATH Ubiquitin carboxyl-terminal hydrolase 2 OS=Arabidopsis thaliana
GN=UBP2 PE=1 SV=2
Length = 961
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 500 LYRLASVVEHFGRVGSGHYTVY--RSVRVESHEENPNEHFETPLTHWFCISDSQVYSVSV 557
+YRLA +VEH G + GHY Y RV+ ++ T W+ +SD+ V VS+
Sbjct: 890 VYRLAGLVEHSGTMRGGHYVAYVRGGQRVK--------ETDSSSTAWYNVSDAYVRQVSL 941
Query: 558 NDVLAAEASLLFYERII 574
VL +EA +LFYERI
Sbjct: 942 EKVLHSEAYILFYERIF 958
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 343 KKLSISHCPQILCIHLQRVSINEMGELVKIWGHIAFPLILDLFPFVKS 390
KK+ I+ P +L IHL+R S + G L K+ GH+AF ++DL ++ S
Sbjct: 834 KKVLINKAPPVLTIHLKRFSQDLRGRLSKLNGHVAFKEVIDLRQYMDS 881
Score = 37.7 bits (86), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 65/181 (35%), Gaps = 26/181 (14%)
Query: 73 LVPGLQNLGNNCFLNVILQALASCTCFLPFLQKVMGECEEPDEDLPLTVALASLLEELCL 132
+V GL NLGN CF N I+Q L S K G PL +L L E
Sbjct: 229 VVRGLVNLGNTCFFNSIMQNLLSLDRLRDHFLKENGS----GVGGPLASSLRKLFTETKP 284
Query: 133 VGETRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYSPNESSLVD 192
+ V++P+ + F Q D+ E L+ SL E ES+L
Sbjct: 285 EAGLKSVINPRAFFGSFCSKAPQFRGYDQHDSHELLRCLLDSLSTE--------ESAL-- 334
Query: 193 AFEAASCRILSLKRREVQSEQKRWRKHFFGPFDGILGSILTCQSCLSQISLDYQFFHSLP 252
K+R V ++ F G SI++C C S Y+ F L
Sbjct: 335 -----------RKKRGVSDNDEKSTTLIESVFGGETSSIVSCMEC-GHSSKVYEPFLDLS 382
Query: 253 L 253
L
Sbjct: 383 L 383
>sp|A4FUN7|UBP12_DANRE Ubiquitin carboxyl-terminal hydrolase 12A OS=Danio rerio GN=usp12a
PE=2 SV=1
Length = 371
Score = 55.8 bits (133), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 111/311 (35%), Gaps = 63/311 (20%)
Query: 76 GLQNLGNNCFLNVILQALASCTCFLPFLQKVMGECEEPDEDLPLTVALASLLEELCLVGE 135
GL N GN C+ N +LQAL C PF +K++ +P L LA L +
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCR---PFREKILAYRSQPRRKENLLTCLADLFHSIANQKR 96
Query: 136 TRLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYSPNESSLVDAFE 195
V+ P+K + + + F+ QQDA E +L++++ + E ++ +
Sbjct: 97 KVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEERKQDKQN-----G 151
Query: 196 AASCRILSLKRREVQSEQKRWRKHFFGPFDGILGSILTCQSCLSQISLDYQFFHSLPLSP 255
+ L + W F G L + C +C + S D F
Sbjct: 152 KLANGTLDSQNNNSTPPSTTWVHEI---FQGTLTNETRCLTCETISSKDEDF-------- 200
Query: 256 VLDSGSTIPFGCTLEDCLKQFLTAEQLENYHCSHCWHIAAIKYLSITEANEMEIEELRRC 315
LD + ++ CL+ F E L + + +C
Sbjct: 201 -LDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYC------------------------- 234
Query: 316 SAQDSCNCRSRLHLETLPWSNKFSHTLKKLSISHCPQILCIHLQRVS-INEMGELVKIWG 374
+ C + H K++ + P IL +HL+R + ++ K+
Sbjct: 235 ---EECRSKQEAH--------------KRMRVKKLPMILALHLKRFKYMEQLQRYTKLSY 277
Query: 375 HIAFPLILDLF 385
+ FPL L LF
Sbjct: 278 RVVFPLELRLF 288
>sp|O88623|UBP2_MOUSE Ubiquitin carboxyl-terminal hydrolase 2 OS=Mus musculus GN=Usp2
PE=1 SV=2
Length = 613
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 122/332 (36%), Gaps = 86/332 (25%)
Query: 76 GLQNLGNNCFLNVILQALASCT-----CFLPFLQKVMGECEEPDEDLPLTVALASLLEEL 130
GL+NLGN CF+N ILQ L++ C + +G + A +L+EE
Sbjct: 276 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHT---------SSAHTALMEEF 326
Query: 131 CLVGET------RLVLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSSLREEFLESYS 184
+ +T V+SP + ++ Y F +QQDA+E L+ L
Sbjct: 327 AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFMGYNQQDAQEFLRFLLDGLH-------- 378
Query: 185 PNESSLVDAFEAASCRILSLKRREVQSEQKRWRKHF------FGP-FDGILGSILTCQSC 237
NE + V A AS L E + Q WRK+ G F G L S LTC C
Sbjct: 379 -NEVNRVAARPKASPETLDHLPDEEKGRQM-WRKYLEREDSRIGDLFVGQLKSSLTCTDC 436
Query: 238 LSQISLDYQFFHSLPLSPVLDSGSTIPFGCTLEDCLKQFLTAEQLENYHCSHCWHIAAIK 297
S + F L L P+ G TL DC++ F +
Sbjct: 437 -GYCSTVFDPFWDLSL-PIAKRGYP---EVTLMDCMRLFTKED----------------- 474
Query: 298 YLSITEANEMEIEELRRCSAQDSCNCRSRLHLETLPWSNKFSHTLKKLSISHCPQILCIH 357
I + +E T +KK S+ P+IL +H
Sbjct: 475 ---ILDGDEKP----------------------TCCRCRARKRCIKKFSVQRFPKILVLH 509
Query: 358 LQRVSINEMGELVKIWGHIAFPLI-LDLFPFV 388
L+R S + + K+ + FPL LDL F
Sbjct: 510 LKRFSESRI-RTSKLTTFVNFPLRDLDLREFA 540
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 16/76 (21%)
Query: 497 NTYLYRLASVVEHFGRVGSGHYTVYRSVRVESHEENPNEHFETPLT-HWFCISDSQVYSV 555
N +Y L +V H G GHYT Y +P+T W +DS V +
Sbjct: 545 NHAVYNLYAVSNHSGTTMGGHYTAY---------------CRSPVTGEWHTFNDSSVTPM 589
Query: 556 SVNDVLAAEASLLFYE 571
S + V ++A LLFYE
Sbjct: 590 SSSQVRTSDAYLLFYE 605
>sp|Q9FPS3|UBP24_ARATH Ubiquitin carboxyl-terminal hydrolase 24 OS=Arabidopsis thaliana
GN=UBP24 PE=1 SV=1
Length = 551
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 119/283 (42%), Gaps = 47/283 (16%)
Query: 76 GLQNLGNNCFLNVILQALASCTCFLPFLQKVMGECEEPDEDLPLTVALASLLEEL----- 130
GL N GN CFLN LQAL SC+ F+ LQK+ + + P D P A + + EL
Sbjct: 198 GLINAGNLCFLNATLQALLSCSPFVQLLQKIQLQ-DIPKADSPTLAAFSEFISELDVPSS 256
Query: 131 -CLVGETRLVLSPQKVMLAM-ELYIQNF------NLTS---QQDAEEAFLHLMSSLREEF 179
+ +V + + AM E ++NF N++ Q+DA+E +M + +E
Sbjct: 257 SSIRNNVTVVEAGRPFRPAMFEGVLRNFTPDVLNNMSGRPRQEDAQEFLSFIMDQMHDEL 316
Query: 180 --LESYSP----NESSLV-------DAFEAASCRILSLKRREVQSEQKRWRKHFFGPFDG 226
L+ SP ++SS++ D +E + S R QS FG G
Sbjct: 317 LKLKEQSPKVTASKSSVISSANDDGDEWETVGPKNKSAVTR-TQSFVPSELSEIFG---G 372
Query: 227 ILGSILTCQSCLSQISLDYQFFHSLPLSPVLDSGSTIPFGCTLEDCLKQFLTAEQLENYH 286
L S++ + + ++ L + P G +ED L F E LE Y
Sbjct: 373 QLKSVVKAKGTKASATVQPYLLLHLDIHPDGVQG--------IEDALHLFSAQEDLEGYR 424
Query: 287 CS---HCWHIAAIKYLSITEANEMEIEELRRCS--AQDSCNCR 324
S ++A K + I + +++ I L R S +Q S R
Sbjct: 425 ASVTGKTGVVSASKSIKIQKLSKIMILHLMRFSYGSQGSTKLR 467
>sp|A8HAL1|UBP16_DANRE Ubiquitin carboxyl-terminal hydrolase 16 OS=Danio rerio GN=usp16
PE=2 SV=1
Length = 815
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 500 LYRLASVVEHFGRVGSGHYTVYRSVRVESHE------ENPNEHFETPLTHWFCISDSQVY 553
LY L +VEH G + SGHYT Y R +H + E WF ISDS V+
Sbjct: 735 LYSLYGIVEHSGTMRSGHYTAYVKSRPSTHNCVQNGTAAASGDAEASKGSWFHISDSSVH 794
Query: 554 SVSVNDVLAAEASLLFYERI 573
V V +++A LLFYE+I
Sbjct: 795 PVPEAKVQSSQAYLLFYEKI 814
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 39/211 (18%)
Query: 74 VPGLQNLGNNCFLNVILQALASCTCFLPFLQKVMGECEEPDEDLPLTVALASLLEELCL- 132
V GL NLGN CF N ++Q+L+ +L++++ + E +T AL+S L+ L +
Sbjct: 207 VRGLSNLGNTCFFNAVVQSLSQTQ----YLRELLKQIAEEKSSFSITPALSSELDPLQIQ 262
Query: 133 -----------------VGETRL-VLSPQKVMLAMELYIQNFNLTSQQDAEEAFLHLMSS 174
+ ET+ V++P+++ + F QQD++E +L+
Sbjct: 263 LERPGSLTLAMCQLMNEIQETKKGVVTPKELFTQVCKKAPRFKGFQQQDSQELLRYLLDG 322
Query: 175 LREEFLESYSPNESSLVDA-------FEAASCRILSLKRREVQSEQKRWRKHFFGPFDGI 227
+R E + + S +++A FEA + + +K E K + FG G
Sbjct: 323 MRAEEAKRVN---SGILEALKSSGKNFEAEQTKKI-VKEYEKDGAPKNFVDRVFG---GA 375
Query: 228 LGSILTCQSCLSQISLDYQFFHSLPLSPVLD 258
+ S + C+ C + +SL + F L L PV D
Sbjct: 376 MSSTVMCKECKT-VSLVTEMFLDLSL-PVAD 404
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 46/121 (38%), Gaps = 30/121 (24%)
Query: 267 CTLEDCLKQFLTAEQLENYHCSHCWHIAAIKYLSITEANEMEIEELRRCSAQDSCNCRSR 326
C++E CL QF E L TE N + + C+
Sbjct: 629 CSVESCLYQFTEVEHL-------------------TENNRLMCVTCTKQQPGYKDGCKKA 669
Query: 327 LHLETLPWSNKFSHTLKKLSISHCPQILCIHLQRVSINEMGELVKIWGHIAFPLILDLFP 386
+ + LK++ IS P +L +HL+R + K+ H+ FP ILDL P
Sbjct: 670 V----------YRDALKQMLISDPPVVLTLHLKRFQQVAYS-VCKVNRHVQFPQILDLAP 718
Query: 387 F 387
F
Sbjct: 719 F 719
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 210,711,329
Number of Sequences: 539616
Number of extensions: 8832020
Number of successful extensions: 19758
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 135
Number of HSP's that attempted gapping in prelim test: 19106
Number of HSP's gapped (non-prelim): 598
length of query: 576
length of database: 191,569,459
effective HSP length: 123
effective length of query: 453
effective length of database: 125,196,691
effective search space: 56714101023
effective search space used: 56714101023
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)