Query 008157
Match_columns 576
No_of_seqs 310 out of 1144
Neff 4.8
Searched_HMMs 46136
Date Thu Mar 28 20:12:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008157.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008157hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02829 Probable galacturonos 100.0 2E-154 3E-159 1253.7 39.1 563 1-575 3-568 (639)
2 PLN02718 Probable galacturonos 100.0 1E-131 2E-136 1077.1 39.6 513 1-575 6-532 (603)
3 PLN02910 polygalacturonate 4-a 100.0 2E-116 5E-121 954.2 30.1 391 185-575 192-586 (657)
4 PLN02742 Probable galacturonos 100.0 2E-112 4E-117 916.3 31.1 394 182-575 66-464 (534)
5 PLN02769 Probable galacturonos 100.0 5E-107 1E-111 886.9 36.0 382 184-575 175-559 (629)
6 PLN02870 Probable galacturonos 100.0 4.7E-93 1E-97 764.9 26.4 355 212-575 86-461 (533)
7 PLN02867 Probable galacturonos 100.0 2.8E-92 6E-97 761.4 24.8 352 224-575 94-463 (535)
8 PLN02659 Probable galacturonos 100.0 8.3E-91 1.8E-95 747.7 25.4 355 212-575 86-462 (534)
9 PLN02523 galacturonosyltransfe 100.0 1E-89 2.3E-94 741.2 26.0 387 188-575 80-488 (559)
10 cd06429 GT8_like_1 GT8_like_1 100.0 4.9E-42 1.1E-46 346.9 14.2 197 339-575 1-199 (257)
11 PRK15171 lipopolysaccharide 1, 100.0 4.7E-29 1E-33 260.7 12.0 197 336-573 23-238 (334)
12 cd04194 GT8_A4GalT_like A4GalT 100.0 8.1E-28 1.7E-32 238.2 14.5 193 339-574 1-210 (248)
13 cd00505 Glyco_transf_8 Members 100.0 5.7E-28 1.2E-32 240.2 12.8 195 339-574 1-214 (246)
14 cd06432 GT8_HUGT1_C_like The C 99.9 1.8E-26 3.9E-31 232.2 11.4 200 339-575 1-221 (248)
15 cd06431 GT8_LARGE_C LARGE cata 99.9 3.3E-26 7.1E-31 234.3 12.6 176 340-555 4-185 (280)
16 COG1442 RfaJ Lipopolysaccharid 99.9 1.7E-25 3.8E-30 233.1 12.9 179 338-559 2-186 (325)
17 PF01501 Glyco_transf_8: Glyco 99.9 3.7E-25 8E-30 213.9 12.4 201 340-573 1-215 (250)
18 cd06430 GT8_like_2 GT8_like_2 99.9 4.1E-23 8.8E-28 213.6 11.2 189 339-572 1-227 (304)
19 cd02537 GT8_Glycogenin Glycoge 99.4 5.4E-13 1.2E-17 133.3 8.8 158 347-574 11-183 (240)
20 PLN00176 galactinol synthase 99.3 1E-11 2.2E-16 130.7 9.6 91 450-547 100-203 (333)
21 cd06914 GT8_GNT1 GNT1 is a fun 99.0 2.4E-10 5.2E-15 117.8 3.7 80 446-554 76-155 (278)
22 KOG1879 UDP-glucose:glycoprote 98.7 1.7E-08 3.7E-13 118.4 7.8 179 338-552 1181-1363(1470)
23 COG5597 Alpha-N-acetylglucosam 95.7 0.0051 1.1E-07 64.8 1.8 93 450-545 155-276 (368)
24 PF03407 Nucleotid_trans: Nucl 68.5 5.3 0.00012 38.9 3.6 51 448-500 49-100 (212)
25 COG4575 ElaB Uncharacterized c 68.4 17 0.00036 33.2 6.3 75 215-291 11-86 (104)
26 PF11051 Mannosyl_trans3: Mann 60.8 5.4 0.00012 41.2 2.1 36 452-487 79-114 (271)
27 KOG1928 Alpha-1,4-N-acetylgluc 54.2 6.3 0.00014 43.3 1.3 33 449-485 227-259 (409)
28 PRK10132 hypothetical protein; 53.6 59 0.0013 29.7 7.3 76 215-292 15-90 (108)
29 PF04488 Gly_transf_sug: Glyco 48.1 13 0.00029 32.5 2.2 35 445-483 61-96 (103)
30 PF10819 DUF2564: Protein of u 45.2 55 0.0012 28.6 5.3 69 219-288 6-78 (79)
31 PRK10807 paraquat-inducible pr 34.8 1.2E+02 0.0026 35.0 7.6 46 240-289 473-518 (547)
32 TIGR02977 phageshock_pspA phag 34.4 63 0.0014 32.5 4.8 106 185-292 26-137 (219)
33 PRK10404 hypothetical protein; 28.1 2.3E+02 0.0049 25.6 6.8 80 211-292 4-84 (101)
34 PF06103 DUF948: Bacterial pro 26.0 1.4E+02 0.003 25.6 4.9 61 218-284 21-81 (90)
35 PF03071 GNT-I: GNT-I family; 25.6 91 0.002 35.1 4.6 116 340-486 97-214 (434)
36 cd00761 Glyco_tranf_GTA_type G 24.7 3.4E+02 0.0074 22.7 7.1 35 345-381 6-40 (156)
37 PF04012 PspA_IM30: PspA/IM30 24.2 1.2E+02 0.0027 30.0 4.8 107 185-291 25-135 (221)
38 PRK15384 type III secretion sy 23.4 38 0.00081 35.6 1.0 24 464-487 216-239 (336)
39 PF05957 DUF883: Bacterial pro 23.3 2.2E+02 0.0048 24.7 5.7 76 216-293 2-78 (94)
40 PF05637 Glyco_transf_34: gala 23.3 52 0.0011 33.6 2.0 24 461-484 74-97 (239)
41 PF03314 DUF273: Protein of un 23.2 53 0.0012 33.7 2.0 24 456-479 34-57 (222)
42 PRK15383 type III secretion sy 23.0 40 0.00086 35.4 1.1 66 212-278 71-139 (335)
43 PRK15382 non-LEE encoded effec 22.9 40 0.00087 35.3 1.1 66 212-278 65-133 (326)
44 COG1842 PspA Phage shock prote 22.7 6.6E+02 0.014 25.8 9.8 24 206-229 75-98 (225)
45 PRK10698 phage shock protein P 22.5 1.6E+02 0.0034 30.0 5.3 106 185-290 26-135 (222)
46 PLN03182 xyloglucan 6-xylosylt 21.7 67 0.0014 35.9 2.6 92 444-557 179-270 (429)
47 PHA01346 hypothetical protein 20.8 3.3E+02 0.0071 21.5 5.4 44 214-259 5-48 (53)
48 PF06785 UPF0242: Uncharacteri 20.3 4.6E+02 0.01 28.9 8.3 105 193-299 109-225 (401)
49 PLN03181 glycosyltransferase; 20.0 81 0.0018 35.4 2.8 35 444-479 180-214 (453)
No 1
>PLN02829 Probable galacturonosyltransferase
Probab=100.00 E-value=1.6e-154 Score=1253.72 Aligned_cols=563 Identities=72% Similarity=1.092 Sum_probs=538.2
Q ss_pred CchhhHHHHHHHHHhhhheeeeeccccccCCCCcccchhhhhhhhccccCCCccccccccCccccccccCCe-EEEeccc
Q 008157 1 MKTRNLVVGMLCATVLAPILIFTSTFKDSYPSSSESGEFLEDLTAFTVGGDARHLNLLPQESSTTLSLKQPI-LVISDKI 79 (576)
Q Consensus 1 ~~~r~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~ 79 (576)
|+.|++||+|||+||+|||+|||+||++.| ||++++||+|||+++++++|+.+||+||||+++ +||||+ |||+|++
T Consensus 3 ~~~r~~~~~~l~~~v~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~lk~p~~~~~~~~~ 79 (639)
T PLN02829 3 MRLRNLVLGLLLLTVLSPILLYTDRLSASF-TPSSKRDFLEDVTALTLGGDASKLNVLPQESSS--SLKEPIGIVYSDNS 79 (639)
T ss_pred HHHHHHHHHHHHHHHhhceeEEeccccccc-CCcchhhhhHHHHhhccCccchhcccccccccc--cccCceeEEeeccc
Confidence 678999999999999999999999999966 999999999999999999999999999999999 999999 9999998
Q ss_pred ccc--cccccccccCcccccccceeccccCCCCCccCCCcccccccchhhhhcccchhhhhhhccccccccccccccccc
Q 008157 80 AQH--SAHSQSQSQGSWEHKSARVLSATTNGLDQSKTDNPIRQVTDLTKTQINKHADQEQIKASDNHISAHHSQILDTKH 157 (576)
Q Consensus 80 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (576)
++. ...++++++|.+||| +|+||++ +|+++|++|++|+|||+...+..+.+.+ +++.+++.++......
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 150 (639)
T PLN02829 80 SKTIEPDSQDLLLDKRGEHK-ARVLSAT-DDDTHSQTDDIIKQVTQKAGQDDSDQQE-------KNSQSQSASQAESLEH 150 (639)
T ss_pred cccccccccccccccccchh-hhhcccc-ccccccccchhHHHhhhccccccccccc-------ccccccccccccchhh
Confidence 774 346799999999999 8999997 5669999999999999875444433332 2566666778888999
Q ss_pred cccccccccccccCCccccccccccCCCCCchhHHHhhhhHHHHHHhhccccccCCchHHHHHHHHHHHHHHHhhccCCC
Q 008157 158 QQESSLTYGVLEKKEPTKINNEKQTEQTTPPDFRVRQLKDQLIKAKVYLSLPAMRNNANFVRELRLRIKEVQRALGDATK 237 (576)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~dql~~a~~Y~~~a~~~~~~~l~~el~~~i~e~~~~l~~a~~ 237 (576)
.|++.+++++.++++|..++++|+++.++|+|++||+|||||||||||++|||++||++|+||||++|||+||+||+|+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~lkDql~~AkaY~~iak~~~~~~l~~el~~~i~e~~r~l~~a~~ 230 (639)
T PLN02829 151 VQQSAQTSEKVDEKEPLLTKTDKQTDQTVMPDARVRQLRDQLIKAKVYLSLPATKANPHFTRELRLRIKEVQRVLGDASK 230 (639)
T ss_pred hhhhhccccccccccccccccccccccccCchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHhhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHHHHHHHHhhccCCcChHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhccCCCcccccccccchhh
Q 008157 238 DSDLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTAKTLPKGLHCLPLRLTTEY 317 (576)
Q Consensus 238 d~~l~~~~~~~~~~m~~~i~~ak~~~~d~~~~~~klr~~l~~~ee~~~~~~~q~~~~~~laa~~~PK~lhcL~~rla~ey 317 (576)
|+|||+++.++|++|+++|++||+++|||+++++|||+|++++||++++||+|++|++||||+|+|||||||+||||.||
T Consensus 231 d~~lp~~~~~~~~~m~~~i~~ak~~~~d~~~~~~KLr~~l~~~Ee~~~~~~~q~~~l~~laa~t~PK~lHCL~mrLt~Ey 310 (639)
T PLN02829 231 DSDLPKNANEKLKAMEQTLAKGKQMQDDCSIVVKKLRAMLHSAEEQLRVHKKQTMFLTQLTAKTLPKGLHCLPLRLTTEY 310 (639)
T ss_pred CCCCChhHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCccccchhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCccCCCCCCCcCCCCCCceEEEEEeccccccccchhhhhcccCCCCceEEEEEeCCCCHHHHHHHHhhCCCCCceeE
Q 008157 318 YTLNSSQRHFPNQEKLEDPRLFHYALFSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQ 397 (576)
Q Consensus 318 ~~~~~~~~~~p~~~~l~dp~~iHIa~~sDNvlaasVvInSiv~N~~~Pe~ivFHIVTD~~s~~amk~WF~~n~~~~a~Ie 397 (576)
|.+++.++++|++++|+||+++|||++|||++|++|||||++.|+++|+++|||||||++||++|++||++||+++|+|+
T Consensus 311 ~~~~~~~~~~p~~~~l~dp~l~Hy~ifSdNVLAasVVVnStv~na~~p~k~VFHivTD~~ny~aM~~WF~~n~~~~A~v~ 390 (639)
T PLN02829 311 YNLNSSEQQFPNQEKLEDPQLYHYALFSDNVLAAAVVVNSTVTNAKHPSKHVFHIVTDRLNYAAMRMWFLVNPPGKATIQ 390 (639)
T ss_pred HhCChhhccCCChhhccCCccceEEEEecceeEEEeeeehhhhcccCccceEEEEecCccchHHHHHHHhhCCCccceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeehhhhhhcccccchhhhhhccccceEEEecccccCCccccccCCCCcchhhhhhhhhhhcccCCCCeEEEEecceeee
Q 008157 398 VQNIEEFTWLNSSYSPVLKQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQ 477 (576)
Q Consensus 398 V~nie~F~wL~~~y~PvLkql~~~~~~~y~F~~~~~~s~~~~k~r~p~y~S~~~y~Rf~LPeLlP~ldKVLYLD~DvIV~ 477 (576)
|+++|+|+||+.+|+|+++||+++.+++|||+.+..++..++++|+|+|+|.++|+|||||++||+++||||||+|+||+
T Consensus 391 V~nie~f~wln~~~~pvl~ql~~~~~~~~yf~~~~~~~~~~~k~r~p~ylS~lnY~RfyLPeLLP~LdKVLYLD~DVVVq 470 (639)
T PLN02829 391 VQNIEEFTWLNSSYSPVLKQLGSQSMIDYYFRAHRANSDSNLKYRNPKYLSILNHLRFYLPEIFPKLNKVLFLDDDIVVQ 470 (639)
T ss_pred EEehhhcccccccccHHHHHhhhhhhhhhhhhccccCcccccccCCcchhhHHHHHHHHHHHHhcccCeEEEEeCCEEeC
Confidence 99999999999999999999999999999998877777788999999999999999999999999999999999999999
Q ss_pred cCchHHhccCCCCCeeEEeecccccccccccccccCChhhhcCCCCCCCceeechhhccHHHHHhhCHHHHHHHHHHHcc
Q 008157 478 KDLSGLWSIDLKGKVNGAVETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMVS 557 (576)
Q Consensus 478 ~DLseLw~iDL~gkviAAVedc~~~f~ry~~yLn~SnP~i~~~f~~~~cYFNSGVmLiDL~kWRk~nit~k~~~w~kln~ 557 (576)
+||++||++||+|+++|||+||+..|++|..+++|++|.+...|+++.||||+|||||||++||++++|++|+.|+++|.
T Consensus 471 gDLseLw~iDL~gkviAAVedc~~~f~r~~~~l~fs~p~i~~~Fn~~~CyFNSGVmVINL~~WRe~nITe~y~~wm~~n~ 550 (639)
T PLN02829 471 KDLTGLWSIDLKGNVNGAVETCGESFHRFDRYLNFSNPLISKNFDPHACGWAYGMNVFDLDEWKRQNITEVYHSWQKLNH 550 (639)
T ss_pred CChHHHHhCCCCCceEEEeccchhhhhhhhhhhhccchHhhhccCCcccceecceEEEeHHHHHHhChHHHHHHHHHHcc
Confidence 99999999999999999999999888999999999999998899999999999999999999999999999999999999
Q ss_pred CcccccccccCCcccccc
Q 008157 558 DVLSSWLASLPNFINYFR 575 (576)
Q Consensus 558 d~~LwklGsLPp~Ll~F~ 575 (576)
++.+|++|+|||+||+|+
T Consensus 551 ~r~L~dlgaLPp~Ll~F~ 568 (639)
T PLN02829 551 DRQLWKLGTLPPGLITFW 568 (639)
T ss_pred CCccccccCCChHHHHhc
Confidence 999999999999999996
No 2
>PLN02718 Probable galacturonosyltransferase
Probab=100.00 E-value=9.9e-132 Score=1077.13 Aligned_cols=513 Identities=43% Similarity=0.753 Sum_probs=470.0
Q ss_pred CchhhHHHHHHHHHhhhheeeeeccccccCCCCcccchhhhhhhhccccCCCccccccccCccccccccCCe-EEEeccc
Q 008157 1 MKTRNLVVGMLCATVLAPILIFTSTFKDSYPSSSESGEFLEDLTAFTVGGDARHLNLLPQESSTTLSLKQPI-LVISDKI 79 (576)
Q Consensus 1 ~~~r~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~ 79 (576)
|+.|++||+|||+||+|||+|||+||+++ +|++|+||+|||+++++++|+.+||+||||+++ +||||+ |||+|++
T Consensus 6 ~~~r~~~~~~l~~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~lk~~~~~~~~~~~ 81 (603)
T PLN02718 6 RWQRILILSLLSLSVFAPLIFVSNRLKSI--TPVGRKEFIEELSTIRYRTDDLRLSAIEQEEGE--GLKGPKLVIYQDGD 81 (603)
T ss_pred HHHHHHHHHHHHHHHhhceeEeecccccc--CccchhhhHHHHhhhccccCccccccccccccc--cccCceeEEeecCC
Confidence 56899999999999999999999999997 999999999999999999999999999999999 999999 9999998
Q ss_pred ccccc-cc------cc---cccCcccccccceeccccCCCCCccCCCcccccccchhhhhcccchhhhhhhccccccccc
Q 008157 80 AQHSA-HS------QS---QSQGSWEHKSARVLSATTNGLDQSKTDNPIRQVTDLTKTQINKHADQEQIKASDNHISAHH 149 (576)
Q Consensus 80 ~~~~~-~~------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (576)
+++.. .. ++ ++++.+||| +| +++.+|.|+|..+.++.. +.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~------------~~~~~~~~~~~~~~~~~~----------------~~- 131 (603)
T PLN02718 82 FNSVVSYNSSDKNNDSLESEVDGGNNHK-PK------------EEQAQVSQKTTVSSSEEV----------------QI- 131 (603)
T ss_pred cCccccccccccccchhhhhccCccccc-cc------------hhcccchheeeccccccc----------------cc-
Confidence 77532 11 24 899999999 44 678889999865443331 11
Q ss_pred cccccccccccccccccccccCCccccccccccCCCCCchhHHHhhhhHHHHHHhhccccccCCchHHHHHHHHHHHHHH
Q 008157 150 SQILDTKHQQESSLTYGVLEKKEPTKINNEKQTEQTTPPDFRVRQLKDQLIKAKVYLSLPAMRNNANFVRELRLRIKEVQ 229 (576)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~dql~~a~~Y~~~a~~~~~~~l~~el~~~i~e~~ 229 (576)
+..+....+++++++ ++...++++|+++++|+|++||+|||||||||||++|||++||++|+||||++|||+|
T Consensus 132 -~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~d~~v~~~~dql~~ak~y~~~a~~~~~~~~~~el~~~i~e~~ 204 (603)
T PLN02718 132 -SARDIQLNHKTQFNP------PTVKHEKNTRVQPRRATDEKVKEIRDKIIQAKAYLNLAPPGSNSQLVKELRLRTKELE 204 (603)
T ss_pred -chhhhhhhhhhccCC------CcccccccCcCCcccCcHHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHH
Confidence 112233333433333 4556799999999999999999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCChhHHHHHHHHHHHHHhhccCCcChHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhccCCCccccc
Q 008157 230 RALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTAKTLPKGLHCL 309 (576)
Q Consensus 230 ~~l~~a~~d~~l~~~~~~~~~~m~~~i~~ak~~~~d~~~~~~klr~~l~~~ee~~~~~~~q~~~~~~laa~~~PK~lhcL 309 (576)
|+||+|+.|+|||+++.++|++|+++|++||+++|||+++++|||||++++||++++||+|++|++||||+|+|||||||
T Consensus 205 ~~l~~~~~d~~lp~~~~~~~~~m~~~~~~a~~~~~d~~~~~~klr~~~~~~e~~~~~~~~q~~~~~~laa~~~PK~lhCL 284 (603)
T PLN02718 205 RAVGDATKDKDLSKSALQRMKSMEVTLYKASRVFPNCPAIATKLRAMTYNTEEQVRAQKNQAAYLMQLAARTTPKGLHCL 284 (603)
T ss_pred HHHhcccCCCCCCHhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhhhcCCccCCCCCCCcCCCCCCceEEEEEeccccccccchhhhhcccCCCCceEEEEEeCCCCHHHHHHHHhhC
Q 008157 310 PLRLTTEYYTLNSSQRHFPNQEKLEDPRLFHYALFSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLAN 389 (576)
Q Consensus 310 ~~rla~ey~~~~~~~~~~p~~~~l~dp~~iHIa~~sDNvlaasVvInSiv~N~~~Pe~ivFHIVTD~~s~~amk~WF~~n 389 (576)
+||||.|||.+++.++++|++++|+||+++|||+++||+++++|+|+|++.|+.+|++++||||||++++++|+.||..+
T Consensus 285 ~~rLt~ey~~~~~~~~~~~~~~~l~d~~~~Hia~~sDNvlaasVvInSil~Ns~np~~ivFHVvTD~is~~~mk~wf~l~ 364 (603)
T PLN02718 285 SMRLTAEYFALDPEKRQLPNQQRYNDPDLYHYVVFSDNVLACSVVVNSTISSSKEPEKIVFHVVTDSLNYPAISMWFLLN 364 (603)
T ss_pred chhhHHHHhhCChhhccCCChhhccCCcceeEEEEcCCceeEEEEhhhhhhccCCCCcEEEEEEeCCCCHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEeehhhhhhcccccchhhhhhccccceEEEecccccCCccccccCCCCcchhhhhhhhhhhcccCCCCeEEE
Q 008157 390 PPGRATVQVQNIEEFTWLNSSYSPVLKQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLF 469 (576)
Q Consensus 390 ~~~~a~IeV~nie~F~wL~~~y~PvLkql~~~~~~~y~F~~~~~~s~~~~k~r~p~y~S~~~y~Rf~LPeLlP~ldKVLY 469 (576)
+..+++|+|.++++|.|++.+|.++++++++ .+++|+|+++|+|||||++||+++||||
T Consensus 365 ~~~~a~I~V~~Iddf~~lp~~~~~~lk~l~s---------------------~~~~~~S~~~y~Rl~ipellp~l~KvLY 423 (603)
T PLN02718 365 PPGKATIQILNIDDMNVLPADYNSLLMKQNS---------------------HDPRYISALNHARFYLPDIFPGLNKIVL 423 (603)
T ss_pred CCCCcEEEEEecchhccccccchhhhhhccc---------------------cccccccHHHHHHHHHHHHhcccCEEEE
Confidence 9889999999999999999999887765432 3468999999999999999999999999
Q ss_pred EecceeeecCchHHhccCCCCCeeEEeecccc---cccccccccccCChhhhcCCCCCCCceeechhhccHHHHHhhCHH
Q 008157 470 LDDDVVVQKDLSGLWSIDLKGKVNGAVETCGE---TFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNIT 546 (576)
Q Consensus 470 LD~DvIV~~DLseLw~iDL~gkviAAVedc~~---~f~ry~~yLn~SnP~i~~~f~~~~cYFNSGVmLiDL~kWRk~nit 546 (576)
||+|+||++||++||++||+|+++|||+||.. .++++..+++|++|.+...|+++.||||+|||||||++||++++|
T Consensus 424 LD~DvVV~~DL~eL~~iDl~~~v~aaVedC~~~~~~~~~~~~~lnfs~p~i~~~fn~~~CyfNsGVlLIDLk~WReenIT 503 (603)
T PLN02718 424 FDHDVVVQRDLSRLWSLDMKGKVVGAVETCLEGEPSFRSMDTFINFSDPWVAKKFDPKACTWAFGMNLFDLEEWRRQKLT 503 (603)
T ss_pred EECCEEecCCHHHHhcCCCCCcEEEEeccccccccchhhhhhhhhccchhhhcccCCCccccccceEEEeHHHHHhcChH
Confidence 99999999999999999999999999999976 355677789999999988999999999999999999999999999
Q ss_pred HHHHHHHHHccCcccccccccCCcccccc
Q 008157 547 DVYHTWQKMVSDVLSSWLASLPNFINYFR 575 (576)
Q Consensus 547 ~k~~~w~kln~d~~LwklGsLPp~Ll~F~ 575 (576)
+++++|++.|.++.+|+.|+|||+|++|+
T Consensus 504 e~~~~~l~~n~~~~l~dqdaLpp~LlvF~ 532 (603)
T PLN02718 504 SVYHKYLQLGVKRPLWKAGSLPIGWLTFY 532 (603)
T ss_pred HHHHHHHHhccCccccCcccccHHHHHhc
Confidence 99999999998889999999999999997
No 3
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase
Probab=100.00 E-value=2.5e-116 Score=954.20 Aligned_cols=391 Identities=57% Similarity=0.981 Sum_probs=380.6
Q ss_pred CCCchhHHHhhhhHHHHHHhhccccccCCchHHHHHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHhhccCCc
Q 008157 185 TTPPDFRVRQLKDQLIKAKVYLSLPAMRNNANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQD 264 (576)
Q Consensus 185 ~~~~d~~~~~l~dql~~a~~Y~~~a~~~~~~~l~~el~~~i~e~~~~l~~a~~d~~l~~~~~~~~~~m~~~i~~ak~~~~ 264 (576)
.+|+|++||+|||||||||||++|||++||++|+||||++|||+||+||+|++|+|||+++.++|++|+++|++||+++|
T Consensus 192 ~~~~d~~vk~lkDQl~~AkaY~~iak~~~~~~l~~eL~~~i~e~~r~ls~a~~d~dlp~~~~~k~~~M~~~l~~ak~~~~ 271 (657)
T PLN02910 192 SPNSDSILKLMRDQIIMAKAYANIAKSNNVTNLYVSLMKQFRENKRAIGEATSDAELHSSALDQAKAMGHVLSIAKDQLY 271 (657)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHhhcccccccCchHHHHHHHHHHHHHHHHhccc
Confidence 48899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhccCCCcccccccccchhhhcCCccCCCCCCCcCCCCCCceEEEEE
Q 008157 265 DCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTAKTLPKGLHCLPLRLTTEYYTLNSSQRHFPNQEKLEDPRLFHYALF 344 (576)
Q Consensus 265 d~~~~~~klr~~l~~~ee~~~~~~~q~~~~~~laa~~~PK~lhcL~~rla~ey~~~~~~~~~~p~~~~l~dp~~iHIa~~ 344 (576)
||+++++||||||+++||++++||+|++|++||||+|+|||||||+||||.|||.+++.++++|++++|+||+++|||++
T Consensus 272 d~~~~~~KLraml~~~Ee~~~~~k~qs~~l~qlaa~t~PK~lHCL~mRLt~Ey~~~~~~~~~~p~~~~l~dp~l~Hy~if 351 (657)
T PLN02910 272 DCHTMARKLRAMLQSTERKVDALKKKSAFLIQLAAKTVPKPLHCLPLQLAADYFLLGFQNKDYVNKKKLEDPSLYHYAIF 351 (657)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCccccchhhHHHHHhCchhhccCCChhhccCCcceeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccccccchhhhhcccCCCCceEEEEEeCCCCHHHHHHHHhhCCCCCceeEEeehhhhhhcccccchhhhhhccccce
Q 008157 345 SDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLNSQSMI 424 (576)
Q Consensus 345 sDNvlaasVvInSiv~N~~~Pe~ivFHIVTD~~s~~amk~WF~~n~~~~a~IeV~nie~F~wL~~~y~PvLkql~~~~~~ 424 (576)
|||++|++|||||++.|+++|+++|||||||++||++|++||++||+++|+|+|+++|+|+||+.+|+|+|+|+++..+.
T Consensus 352 SDNVLAaSVVVnSTv~na~~P~k~VFHiVTD~~ny~aM~~WF~~n~~~~A~V~V~nie~f~wln~~~~pvl~qles~~~~ 431 (657)
T PLN02910 352 SDNVLATSVVVNSTVLHAKEPQKHVFHIVTDKLNFAAMKMWFIINPPAKATIQVENIDDFKWLNSSYCSVLRQLESARIK 431 (657)
T ss_pred ecceeeEEeehhhhhhcccCccceEEEEecCccccHHHHHHHhhCCCccceEEEeehhhcccccccccHHHHHHhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecccccCC----ccccccCCCCcchhhhhhhhhhhcccCCCCeEEEEecceeeecCchHHhccCCCCCeeEEeeccc
Q 008157 425 DYYFRAHRANS----DSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCG 500 (576)
Q Consensus 425 ~y~F~~~~~~s----~~~~k~r~p~y~S~~~y~Rf~LPeLlP~ldKVLYLD~DvIV~~DLseLw~iDL~gkviAAVedc~ 500 (576)
.|||..+...+ ..++++|+|+|+|+++|+|||||++||+++||||||+|+||++||++||++||+|+++|||+||.
T Consensus 432 ~~yf~~~~~~~~~~~~~~~k~r~p~ylS~lnY~Rf~LPelLp~l~KVLYLD~DVVV~gDLseLw~iDL~g~v~AAVedc~ 511 (657)
T PLN02910 432 EYYFKANHPSSLSAGADNLKYRNPKYLSMLNHLRFYLPEVYPKLEKILFLDDDIVVQKDLTPLWSIDMQGMVNGAVETCK 511 (657)
T ss_pred hhhhhccccccccccccccccCCcchhhHHHHHHHHHHHHhhhcCeEEEEeCCEEecCchHHHHhCCcCCceEEEecccc
Confidence 99998643322 34788999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccCChhhhcCCCCCCCceeechhhccHHHHHhhCHHHHHHHHHHHccCcccccccccCCcccccc
Q 008157 501 ETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMVSDVLSSWLASLPNFINYFR 575 (576)
Q Consensus 501 ~~f~ry~~yLn~SnP~i~~~f~~~~cYFNSGVmLiDL~kWRk~nit~k~~~w~kln~d~~LwklGsLPp~Ll~F~ 575 (576)
.+|++|..+++|++|.+...|++++||||+|||||||++||++++|+.++.|++.|.+.++|++|+|||||++|+
T Consensus 512 ~~f~r~~~ylnfs~P~i~~yFNs~aCyfNsGVmVIDL~~WRe~nITe~ye~w~eln~~~~L~dqgsLPpgLLvF~ 586 (657)
T PLN02910 512 ESFHRFDKYLNFSNPKISENFDPNACGWAFGMNMFDLKEWRKRNITGIYHYWQDLNEDRTLWKLGSLPPGLITFY 586 (657)
T ss_pred hhhhhhhhhhccCChhhhhccCCCCceeecccEEEeHHHHHHhhHHHHHHHHHHhcccccccccCCCChHHHHHh
Confidence 888999999999999998899999999999999999999999999999999999999999999999999999997
No 4
>PLN02742 Probable galacturonosyltransferase
Probab=100.00 E-value=1.9e-112 Score=916.29 Aligned_cols=394 Identities=48% Similarity=0.796 Sum_probs=379.3
Q ss_pred cCCCCCchhHHHhhhhHHHHHHhhccccccCCchHHHHHHHHHHHHHHHhhccCCCCCCC--ChhHHHHHHHHHHHHHhh
Q 008157 182 TEQTTPPDFRVRQLKDQLIKAKVYLSLPAMRNNANFVRELRLRIKEVQRALGDATKDSDL--PRIANDRLKAMEQSLAKG 259 (576)
Q Consensus 182 ~~~~~~~d~~~~~l~dql~~a~~Y~~~a~~~~~~~l~~el~~~i~e~~~~l~~a~~d~~l--~~~~~~~~~~m~~~i~~a 259 (576)
++...++|++||+|||||||||||++|||++||++|+||||++|||+||+||+|+.|+++ |+++.++|++|+++|++|
T Consensus 66 ~~~~~~~~~~~~~l~dql~~Ak~y~~ia~~~~~~~l~~el~~~i~e~~~~l~~a~~d~~~~~~~~~~~~~~~m~~~i~~a 145 (534)
T PLN02742 66 TEEMLSATSFSRQLADQITLAKAYVVIAKEHNNLQLAWELSAQIRNCQLLLSKAATRGEPITVEEAEPIIRDLAALIYQA 145 (534)
T ss_pred hhhhcChHHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHH
Confidence 444589999999999999999999999999999999999999999999999999999887 379999999999999999
Q ss_pred ccCCcChHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhccCCCcccccccccchhhhcCCccCC---CCCCCcCCCCC
Q 008157 260 KQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTAKTLPKGLHCLPLRLTTEYYTLNSSQR---HFPNQEKLEDP 336 (576)
Q Consensus 260 k~~~~d~~~~~~klr~~l~~~ee~~~~~~~q~~~~~~laa~~~PK~lhcL~~rla~ey~~~~~~~~---~~p~~~~l~dp 336 (576)
|+++|||+++++|||+|++++||++++||+|++|++||||+|+|||||||+||||.|||.+++.++ +.|+.++|+||
T Consensus 146 k~~~~d~~~~~~klr~~l~~~e~~~~~~~~q~~~~~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~~~~~~~~l~d~ 225 (534)
T PLN02742 146 QDLHYDSATTIMTLKAHIQALEERANAATVQSTKFGQLAAEALPKSLYCLGVRLTTEWFKNPKLQRKAEEKRNSPRLVDN 225 (534)
T ss_pred HhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCccccchHhHHHHHhCchhhhccccccccccccCC
Confidence 999999999999999999999999999999999999999999999999999999999999998854 34567899999
Q ss_pred CceEEEEEeccccccccchhhhhcccCCCCceEEEEEeCCCCHHHHHHHHhhCCCCCceeEEeehhhhhhcccccchhhh
Q 008157 337 RLFHYALFSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLK 416 (576)
Q Consensus 337 ~~iHIa~~sDNvlaasVvInSiv~N~~~Pe~ivFHIVTD~~s~~amk~WF~~n~~~~a~IeV~nie~F~wL~~~y~PvLk 416 (576)
+++|||++|||++|++|||||++.|+++|+++|||||||+.++.+|++||..|++++++|+|+++++|+|++.+|+|||+
T Consensus 226 ~l~Hy~ifSdNvlAasvvvnStv~nsk~P~~~VFHiVTD~~n~~aM~~WF~~n~~~~a~v~V~n~e~f~wl~~~~~pvl~ 305 (534)
T PLN02742 226 NLYHFCVFSDNILATSVVVNSTVSNAKHPDQLVFHLVTDEVNYGAMQAWFAMNDFKGVTVEVQKIEEFSWLNASYVPVLK 305 (534)
T ss_pred CcceEEEEeccchhhhhhhhhhHhhhcCCCcEEEEEeechhhHHHHHHHHhhCCCCccEEEEEEeccccccccccchHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccccceEEEecccccCCccccccCCCCcchhhhhhhhhhhcccCCCCeEEEEecceeeecCchHHhccCCCCCeeEEe
Q 008157 417 QLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAV 496 (576)
Q Consensus 417 ql~~~~~~~y~F~~~~~~s~~~~k~r~p~y~S~~~y~Rf~LPeLlP~ldKVLYLD~DvIV~~DLseLw~iDL~gkviAAV 496 (576)
||++++++.|||.++..+...+.++|+|+|+|+++|+|||||++||+++||||||+|+||++||++||++||+|+++|||
T Consensus 306 ql~~~~~~~~yf~~~~~~~~~~~k~r~p~y~s~~~y~R~~lP~llp~l~KvlYLD~DvVV~~DL~eL~~~DL~~~viaAV 385 (534)
T PLN02742 306 QLQDSDTQSYYFSGSQDDGKTEIKFRNPKYLSMLNHLRFYIPEIYPALEKVVFLDDDVVVQKDLTPLFSIDLHGNVNGAV 385 (534)
T ss_pred HhhhhhhhhhhcccccccccccccccCcccccHHHHHHHHHHHHhhccCeEEEEeCCEEecCChHHHhcCCCCCCEEEEe
Confidence 99999999999988775555677889999999999999999999999999999999999999999999999999999999
Q ss_pred ecccccccccccccccCChhhhcCCCCCCCceeechhhccHHHHHhhCHHHHHHHHHHHccCcccccccccCCcccccc
Q 008157 497 ETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMVSDVLSSWLASLPNFINYFR 575 (576)
Q Consensus 497 edc~~~f~ry~~yLn~SnP~i~~~f~~~~cYFNSGVmLiDL~kWRk~nit~k~~~w~kln~d~~LwklGsLPp~Ll~F~ 575 (576)
+||+.+|++|.+|+||+||.++.+|+++.||||+|||||||++||++++|+.++.|++.|.+..+|++|+|||+|++|+
T Consensus 386 edC~~~f~ry~~yLnfS~p~i~~~f~~~aC~fNsGV~ViDL~~WRe~nITe~~~~w~e~n~~~~l~d~gaLpp~LLaF~ 464 (534)
T PLN02742 386 ETCLETFHRYHKYLNFSHPLISSHFDPDACGWAFGMNVFDLVAWRKANVTAIYHYWQEQNVDRTLWKLGTLPPGLLTFY 464 (534)
T ss_pred CchhhhhhhhhhhhcccchhhhccCCCCccccccCcEEEeHHHHHhhcHHHHHHHHHHhccccccccccccchHHHHHc
Confidence 9999899999999999999999999999999999999999999999999999999999999999999999999999997
No 5
>PLN02769 Probable galacturonosyltransferase
Probab=100.00 E-value=5e-107 Score=886.92 Aligned_cols=382 Identities=42% Similarity=0.685 Sum_probs=357.6
Q ss_pred CCCCchhHHHhhhhHHHHHHhhc-cccccCCchHHHHHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHhhccC
Q 008157 184 QTTPPDFRVRQLKDQLIKAKVYL-SLPAMRNNANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQI 262 (576)
Q Consensus 184 ~~~~~d~~~~~l~dql~~a~~Y~-~~a~~~~~~~l~~el~~~i~e~~~~l~~a~~d~~l~~~~~~~~~~m~~~i~~ak~~ 262 (576)
-++|+|++||+|||||||||||+ +|||++||++|+||||++|||+||+||||+.|+|||+++.++|++|+++|++||++
T Consensus 175 ~~~~~d~~~~~l~Dql~~Ak~y~~~iak~~~~~~l~~el~~~i~e~~~~l~~~~~d~dlp~~~~~~~~~m~~~~~~ak~~ 254 (629)
T PLN02769 175 KEVMKDSIVKRLKDQLFVARAYYPSIAKLPGQEKLTRELKQNIQEHERVLSESITDADLPPFIQKKLEKMEQTIARAKSC 254 (629)
T ss_pred cccCcHHHHHHHHHHHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHHHHhhccccccCChhHHHHHHHHHHHHHHHHhh
Confidence 35899999999999999999996 99999999999999999999999999999999999999999999999999999999
Q ss_pred CcChHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhccCCCcccccccccchhhhcCCccCCCCCCCcCCCCCCceEEE
Q 008157 263 QDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTAKTLPKGLHCLPLRLTTEYYTLNSSQRHFPNQEKLEDPRLFHYA 342 (576)
Q Consensus 263 ~~d~~~~~~klr~~l~~~ee~~~~~~~q~~~~~~laa~~~PK~lhcL~~rla~ey~~~~~~~~~~p~~~~l~dp~~iHIa 342 (576)
.|||.++++||||||++|||++++|++|++|++||||+|+|||||||+||||.|||.+++.++++|++++|+||+++|||
T Consensus 255 ~~dc~~~~~klr~~l~~~E~~~~~~~kq~~~l~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~~~~~l~d~~l~Hy~ 334 (629)
T PLN02769 255 PVDCNNVDRKLRQILDMTEDEAHFHMKQSAFLYQLGVQTMPKSHHCLSMRLTVEYFKSSSLDMEDSNSEKFSDPSLRHYV 334 (629)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccchhhHHHHHhCchhhccCCchhhccCCccceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccccccccchhhhhcccCCCCceEEEEEeCCCCHHHHHHHHhhCCCCCceeEEeehhhhhhcccccchhhhhhcccc
Q 008157 343 LFSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLNSQS 422 (576)
Q Consensus 343 ~~sDNvlaasVvInSiv~N~~~Pe~ivFHIVTD~~s~~amk~WF~~n~~~~a~IeV~nie~F~wL~~~y~PvLkql~~~~ 422 (576)
++|||++|++||||||+.|+++|+++|||||||+.++++|++||.+|++++|+|+|+++|+|+|.+. ..|+++|+++++
T Consensus 335 ifSdNvlAasvvvNStv~na~~p~~~VFHiVTD~~n~~am~~WF~~n~~~~a~v~v~n~e~~~~~~~-~~~~~~~l~~~~ 413 (629)
T PLN02769 335 IFSKNVLAASVVINSTVVHSRESGNIVFHVLTDAQNYYAMKHWFDRNSYKEAAVQVLNIEDLILKDL-DKFALKQLSLPE 413 (629)
T ss_pred EEeccceeeeeehhhhhhhccCccceEEEEecChhhHHHHHHHHhcCCCccceEEEeeeeeeeeccc-chHHHHhhccch
Confidence 9999999999999999999999999999999999999999999999999999999999999999765 479999999988
Q ss_pred ceEEEecccccCCccccccCCCCcchhhhhhhhhhhcccCCCCeEEEEecceeeecCchHHhccCCCCCeeEEeeccccc
Q 008157 423 MIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGET 502 (576)
Q Consensus 423 ~~~y~F~~~~~~s~~~~k~r~p~y~S~~~y~Rf~LPeLlP~ldKVLYLD~DvIV~~DLseLw~iDL~gkviAAVedc~~~ 502 (576)
..+++|.....+. .+.++|+|+|+++|+|||||++||+++||||||+|+||++||++||++||+|+++|||+||...
T Consensus 414 ~~~~~~~~~~~~~---~~~~~~eyiS~~nh~RfyIPELLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~r 490 (629)
T PLN02769 414 EFRVSFRSVDNPS---SKQMRTEYLSVFSHSHFLLPEIFKKLKKVVVLDDDVVVQRDLSFLWNLDMGGKVNGAVQFCGVR 490 (629)
T ss_pred hhhhhhccCCCCc---hhccCcccccHHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhcCCCCCCeEEEehhhhhh
Confidence 8888887654332 3456799999999999999999999999999999999999999999999999999999999765
Q ss_pred ccccccccccCChhhhcCCCCCCCceeechhhccHHHHHhhCHHHHHHHHHHHc-c-CcccccccccCCcccccc
Q 008157 503 FHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMV-S-DVLSSWLASLPNFINYFR 575 (576)
Q Consensus 503 f~ry~~yLn~SnP~i~~~f~~~~cYFNSGVmLiDL~kWRk~nit~k~~~w~kln-~-d~~LwklGsLPp~Ll~F~ 575 (576)
++++..|++ ..+|+++.||||+|||||||++||+++++++++.|++.+ . +..+|+.|+|||++++|+
T Consensus 491 l~~~~~yl~------~~~F~~~~CyFNSGVLLINL~~WRk~nITe~~~~~~~~~~~~~~~~~~~~~Lp~lnlvF~ 559 (629)
T PLN02769 491 LGQLKNYLG------DTNFDTNSCAWMSGLNVIDLDKWRELDVTETYLKLLQKFSKDGEESLRAAALPASLLTFQ 559 (629)
T ss_pred hhhhhhhhc------ccCCCccccccccCeeEeeHHHHHHhCHHHHHHHHHHHhhhcccccccccCcCHHHHHhc
Confidence 555544432 247888999999999999999999999999999998764 3 468999999999999996
No 6
>PLN02870 Probable galacturonosyltransferase
Probab=100.00 E-value=4.7e-93 Score=764.95 Aligned_cols=355 Identities=44% Similarity=0.769 Sum_probs=326.1
Q ss_pred CCchHHHHHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHhhccCCcChHHHHHHHHHHHHHHHHHHHHHHHhH
Q 008157 212 RNNANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQT 291 (576)
Q Consensus 212 ~~~~~l~~el~~~i~e~~~~l~~a~~d~~l~~~~~~~~~~m~~~i~~ak~~~~d~~~~~~klr~~l~~~ee~~~~~~~q~ 291 (576)
....++.+||.+-+.|. .-+||+.|++||+++.+.|+ +||+.+|||+++++|||+|++++||+++++|+|+
T Consensus 86 ~~~~~~~~~~~~~l~~~--~~~~~~~d~~lp~s~~~~~~-------~~~~~~~d~~~~~~kl~~~~~~~e~~~~~~~~~~ 156 (533)
T PLN02870 86 DDSERLVRDFYKILNEV--NTEEIPDGLKLPDSFSQLVS-------DMKNNHYDAKTFAFVLRAMMEKFERELRESKFAE 156 (533)
T ss_pred CchhhhHHHHHHHHHHh--ccccccccccCChhHHHHHH-------HHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33447999999888884 57889999999988666655 7888999999999999999999999999999999
Q ss_pred HHHHHHhhccCCCcccccccccchhhhcCCccCCCCCCCc---CCCCCCceEEEEEeccccccccchhhhhcccCCCCce
Q 008157 292 LFLTQLTAKTLPKGLHCLPLRLTTEYYTLNSSQRHFPNQE---KLEDPRLFHYALFSDNVLAAAVVVNSTVTHAKHPSNH 368 (576)
Q Consensus 292 ~~~~~laa~~~PK~lhcL~~rla~ey~~~~~~~~~~p~~~---~l~dp~~iHIa~~sDNvlaasVvInSiv~N~~~Pe~i 368 (576)
+|++||||+|+|||||||+||||.|||.++.+++++|+++ +|+||+++|||++|||++|++|||||++.|+++|+++
T Consensus 157 ~~~~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~~~e~~~~l~dp~~~Hy~ifSdNvLAasVvvnStv~~a~~p~~~ 236 (533)
T PLN02870 157 LMNKHFAASSIPKGIHCLSLRLTDEYSSNAHARKQLPSPELLPVLSDNSYHHFVLSTDNILAASVVVSSTVQSSLKPEKI 236 (533)
T ss_pred HHHHHHHHhhcCCCccccchhhHHHHHhCchhhhcCCcccccccccCCcceeEEEEecceeEEEeeeehhhhcccCccce
Confidence 9999999999999999999999999999998888888765 8999999999999999999999999999999999999
Q ss_pred EEEEEeCCCCHHHHHHHHhhCCCCCceeEEeehhhhhhcccccchhhhhhccccceEE-EecccccC---C-------cc
Q 008157 369 VFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLNSQSMIDY-YFRAHRAN---S-------DS 437 (576)
Q Consensus 369 vFHIVTD~~s~~amk~WF~~n~~~~a~IeV~nie~F~wL~~~y~PvLkql~~~~~~~y-~F~~~~~~---s-------~~ 437 (576)
|||||||++||++|++||++||+++|+|+|+++|+|+||+.+|+|+|+|+|++.++.+ +|.++... + ..
T Consensus 237 VFHvvTD~~n~~aM~~WF~~n~~~~a~v~V~~~e~f~wl~~~~~pvl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (533)
T PLN02870 237 VFHVITDKKTYAGMHSWFALNSVSPAIVEVKGVHQFDWLTRENVPVLEAVESHNGIRNYYHGNHIAGANLSETTPRTFAS 316 (533)
T ss_pred EEEEecCccccHHHHHHHhhCCCccceEEEEehhhccccccccchHHHHHhhhHHHHHHhhcccccccccccccchhhhc
Confidence 9999999999999999999999999999999999999999999999999999887654 44433321 1 13
Q ss_pred ccccCCCCcchhhhhhhhhhhcccCCCCeEEEEecceeeecCchHHhccCCCCCeeEEeeccccc-----cccccccccc
Q 008157 438 NLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGET-----FHRFDRYLNF 512 (576)
Q Consensus 438 ~~k~r~p~y~S~~~y~Rf~LPeLlP~ldKVLYLD~DvIV~~DLseLw~iDL~gkviAAVedc~~~-----f~ry~~yLn~ 512 (576)
++++|+|+|+|+++|+|||||++||+++||||||+|+||++||++||++||+|+++|||+||... ++++..|+||
T Consensus 317 ~l~~~~p~ylS~lny~Rl~LPelLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviaAVeDc~~~~~~~~~~~~~~YfNf 396 (533)
T PLN02870 317 KLQARSPKYISLLNHLRIYLPELFPNLDKVVFLDDDVVIQRDLSPLWDIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNF 396 (533)
T ss_pred ccccCCccccCHHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhhCCCCCceEEEEccccccchhhhhhhhhhhccc
Confidence 67889999999999999999999999999999999999999999999999999999999999642 3567789999
Q ss_pred CChhhhcCCCCCCCceeechhhccHHHHHhhCHHHHHHHHHHHcc--CcccccccccCCcccccc
Q 008157 513 SNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMVS--DVLSSWLASLPNFINYFR 575 (576)
Q Consensus 513 SnP~i~~~f~~~~cYFNSGVmLiDL~kWRk~nit~k~~~w~kln~--d~~LwklGsLPp~Ll~F~ 575 (576)
+||.+..+|+++.||||+|||||||++||++++|+++++|++.+. +..+|+.|+|||++++|+
T Consensus 397 s~p~i~~~fd~~~cyfNSGVlLINL~~WRe~nITek~~~~l~~n~~~~l~l~DQdaLp~~livf~ 461 (533)
T PLN02870 397 SHPLIAKNLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFK 461 (533)
T ss_pred ccchhhcccCcccceeeccchhccHHHHHHcChHHHHHHHHHhhhhcCceecccccccHhHHHhc
Confidence 999999999999999999999999999999999999999998764 458999999999999996
No 7
>PLN02867 Probable galacturonosyltransferase
Probab=100.00 E-value=2.8e-92 Score=761.36 Aligned_cols=352 Identities=39% Similarity=0.700 Sum_probs=324.5
Q ss_pred HHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHhhccCCcChHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhccCC
Q 008157 224 RIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTAKTLP 303 (576)
Q Consensus 224 ~i~e~~~~l~~a~~d~~l~~~~~~~~~~m~~~i~~ak~~~~d~~~~~~klr~~l~~~ee~~~~~~~q~~~~~~laa~~~P 303 (576)
-.+|++|+++||+.|+++|+.+.++.++|+++++++++.+|||++++.|||||++++||+++++|+|++|++||||+|+|
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~kl~am~~~~e~~~~~~~~~~~~~~~laa~t~P 173 (535)
T PLN02867 94 LREELTRALVEAKEQDDGGRGTKGSTESFNDLVKEMTSNRQDIKAFAFRTKAMLLKMERKVQSARQRESIYWHLASHGIP 173 (535)
T ss_pred HHHHHHHHHHHhhhccccCcchhhhhhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Confidence 34667889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccccccchhhhcCCccCCCCCCCc---CCCCCCceEEEEEeccccccccchhhhhcccCCCCceEEEEEeCCCCHH
Q 008157 304 KGLHCLPLRLTTEYYTLNSSQRHFPNQE---KLEDPRLFHYALFSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYA 380 (576)
Q Consensus 304 K~lhcL~~rla~ey~~~~~~~~~~p~~~---~l~dp~~iHIa~~sDNvlaasVvInSiv~N~~~Pe~ivFHIVTD~~s~~ 380 (576)
||||||+||||.|||.++++++++|+++ +++||+++|||++|||++|++|||||++.|+++|+++|||||||++||+
T Consensus 174 K~lHCL~mrLt~ey~~~~~~~~~~~~~~~~~~l~d~~~~Hy~ifSdNvLAasVvvnStv~~a~~p~~~VfHvvTD~~ny~ 253 (535)
T PLN02867 174 KSLHCLCLKLAEEYAVNAMARSRLPPPESVSRLTDPSFHHVVLLTDNVLAASVVISSTVQNAANPEKLVFHIVTDKKTYT 253 (535)
T ss_pred CCccccchhhHHHHHhCchhhccCCChhhhhhccCCCcceEEEEecceeEEEeeeehhhhcccCccceEEEEecCccccH
Confidence 9999999999999999999999998765 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCCCceeEEeehhhhhhcccccchhhhhhccccce-EEEeccc-------ccCCccccccCCCCcchhhhh
Q 008157 381 AMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLNSQSMI-DYYFRAH-------RANSDSNLKFRNPKYLSILNH 452 (576)
Q Consensus 381 amk~WF~~n~~~~a~IeV~nie~F~wL~~~y~PvLkql~~~~~~-~y~F~~~-------~~~s~~~~k~r~p~y~S~~~y 452 (576)
+|++||++||+++|+|||+++|+|+|++.+|+|+++++|++++. .+||.+. ......++++++|+|+|+++|
T Consensus 254 aM~~WF~~n~~~~a~v~V~~~~~f~wl~~~~~~v~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pkylS~lnY 333 (535)
T PLN02867 254 PMHAWFAINSIKSAVVEVKGLHQYDWSQEVNVGVKEMLEIHRLIWSHYYQNLKESDFQFEGTHKRSLEALSPSCLSLLNH 333 (535)
T ss_pred HHHHHHhhCCCccceEEEEeehhccccccccccHHHHHHHhhhhhhhhhccccccccccccccccchhhcChhhhhHHHH
Confidence 99999999999999999999999999999999999999987644 2232221 112234677899999999999
Q ss_pred hhhhhhcccCCCCeEEEEecceeeecCchHHhccCCCCCeeEEeec--cccc---ccccccccccCChhhhcCCCCCCCc
Q 008157 453 LRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVET--CGET---FHRFDRYLNFSNPLISKNFDPRACG 527 (576)
Q Consensus 453 ~Rf~LPeLlP~ldKVLYLD~DvIV~~DLseLw~iDL~gkviAAVed--c~~~---f~ry~~yLn~SnP~i~~~f~~~~cY 527 (576)
+|||||++||+++||||||+|+||++||++||++||+|+++|||.| |... .++|.+|+||++|.+..+|+++.||
T Consensus 334 lRflIPeLLP~LdKVLYLD~DVVVqgDLseLwdiDL~gkviaAV~D~~c~~~~~~~~~~~~YlNfsnp~i~~~~~p~~cY 413 (535)
T PLN02867 334 LRIYIPELFPDLNKIVFLDDDVVVQHDLSSLWELDLNGKVVGAVVDSWCGDNCCPGRKYKDYLNFSHPLISSNLDQERCA 413 (535)
T ss_pred HHHHHHHHhhccCeEEEecCCEEEcCchHHHHhCcCCCCeEEEEeccccccccccchhhhhhccccchhhhccCCCCCcc
Confidence 9999999999999999999999999999999999999999999976 4322 2457789999999998899999999
Q ss_pred eeechhhccHHHHHhhCHHHHHHHHHHHccC--cccccccccCCcccccc
Q 008157 528 WAYGMNIFDLDEWRRQNITDVYHTWQKMVSD--VLSSWLASLPNFINYFR 575 (576)
Q Consensus 528 FNSGVmLiDL~kWRk~nit~k~~~w~kln~d--~~LwklGsLPp~Ll~F~ 575 (576)
||+|||||||++||++++|+++++|++.+.+ ..+|+.|+||++|++|+
T Consensus 414 FNSGVmLINL~~WRe~nITek~~~~Le~n~~~~~~l~dqd~LN~~LlvF~ 463 (535)
T PLN02867 414 WLYGMNVFDLKAWRRTNITEAYHKWLKLSLNSGLQLWQPGALPPALLAFK 463 (535)
T ss_pred eecceeeeeHHHHHHhcHHHHHHHHHHhchhcccccccccccchHHHHhc
Confidence 9999999999999999999999999998865 58999999999999986
No 8
>PLN02659 Probable galacturonosyltransferase
Probab=100.00 E-value=8.3e-91 Score=747.70 Aligned_cols=355 Identities=42% Similarity=0.737 Sum_probs=323.0
Q ss_pred CCchHHHHHHHHHHHH-HHHhhccCCCCCCCChhHHHHHHHHHHHHHhhccCCcChHHHHHHHHHHHHHHHHHHHHHHHh
Q 008157 212 RNNANFVRELRLRIKE-VQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQ 290 (576)
Q Consensus 212 ~~~~~l~~el~~~i~e-~~~~l~~a~~d~~l~~~~~~~~~~m~~~i~~ak~~~~d~~~~~~klr~~l~~~ee~~~~~~~q 290 (576)
....++.+||.+-+.| .. =.|...|.++|.+ |++++.++++.+|||+++++|||||++++||+++++|+|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~--~~e~~~~~~~~~~-------~~~~~~~~~~~~~d~~~~~~klr~~l~~~E~~~~~~k~~ 156 (534)
T PLN02659 86 LDSANVPEVMYQVLEQPLS--NDELKGRSDIPQT-------LEEFMDEVKNSRSDARAFALKLREMVTLLEQRTRTAKIQ 156 (534)
T ss_pred CcccccHHHHHHHHHhhhc--ccccCCccccchH-------HHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344677777777666 32 1266678888854 778888888999999999999999999999999999999
Q ss_pred HHHHHHHhhccCCCcccccccccchhhhcCCccCCCCCCCc---CCCCCCceEEEEEeccccccccchhhhhcccCCCCc
Q 008157 291 TLFLTQLTAKTLPKGLHCLPLRLTTEYYTLNSSQRHFPNQE---KLEDPRLFHYALFSDNVLAAAVVVNSTVTHAKHPSN 367 (576)
Q Consensus 291 ~~~~~~laa~~~PK~lhcL~~rla~ey~~~~~~~~~~p~~~---~l~dp~~iHIa~~sDNvlaasVvInSiv~N~~~Pe~ 367 (576)
+.++.||||+|+|||||||+||||.|||.+++.++++|+++ +|+||+++|||++|||++|++|||||++.|+++|++
T Consensus 157 ~~~~~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~~~~~~~~l~d~~l~Hy~ifSdNvLAasVVvnStv~~a~~p~~ 236 (534)
T PLN02659 157 EYLYRHVASSSIPKQLHCLALRLANEHSTNAAARLQLPLAELVPALVDNSYFHFVLASDNILAASVVANSLVQNALRPHK 236 (534)
T ss_pred HHHHHHHHhhhCCCCccccchhhHHHHHhCchhhhccCCcccccccCCCCcceEEEEecceeEEEeeeehhhhcccCccc
Confidence 99999999999999999999999999999999999988766 799999999999999999999999999999999999
Q ss_pred eEEEEEeCCCCHHHHHHHHhhCCCCCceeEEeehhhhhhcccccchhhhhhccccceEEEeccccc----CC-------c
Q 008157 368 HVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLNSQSMIDYYFRAHRA----NS-------D 436 (576)
Q Consensus 368 ivFHIVTD~~s~~amk~WF~~n~~~~a~IeV~nie~F~wL~~~y~PvLkql~~~~~~~y~F~~~~~----~s-------~ 436 (576)
+|||||||++||++|++||++||+++|+|||+++|+|+||+.+|+||++|++++....++|..+.. ++ .
T Consensus 237 ~VFHivTD~~ny~aM~~WF~~n~~~~a~v~V~~~e~f~wl~~~~~pvl~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (534)
T PLN02659 237 FVLHIITDRKTYSPMQAWFSLHPLSPAIIEVKALHHFDWFAKGKVPVLEAMEKDQRVRSQFRGGSSAIVANNTEKPHVIA 316 (534)
T ss_pred eEEEEecCccccHHHHHHHhhCCCccceEEEEeehhcccccccccHHHHHHhhhhhhhhhhcccccccccccccCccccc
Confidence 999999999999999999999999999999999999999999999999999999989899874331 11 1
Q ss_pred cccccCCCCcchhhhhhhhhhhcccCCCCeEEEEecceeeecCchHHhccCCCCCeeEEeeccccc--c---cccccccc
Q 008157 437 SNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGET--F---HRFDRYLN 511 (576)
Q Consensus 437 ~~~k~r~p~y~S~~~y~Rf~LPeLlP~ldKVLYLD~DvIV~~DLseLw~iDL~gkviAAVedc~~~--f---~ry~~yLn 511 (576)
.++++|+|+|+|+++|+|||||++||+++||||||+|+||++||++||++||+|+++|||+||... + +++..|++
T Consensus 317 ~~l~~~~p~ylS~~nY~RL~IPeLLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkv~AAVeDc~~~d~~~~~~~~~~yL~ 396 (534)
T PLN02659 317 AKLQALSPKYNSVMNHIRIHLPELFPSLNKVVFLDDDIVVQTDLSPLWDIDMNGKVNGAVETCRGEDKFVMSKKLKSYLN 396 (534)
T ss_pred cccccCCccceeHHHHHHHHHHHHhhhcCeEEEeeCCEEEcCchHHHHhCCCCCcEEEEeeccccccchhhhHHHHHhhc
Confidence 356779999999999999999999999999999999999999999999999999999999999642 2 56778999
Q ss_pred cCChhhhcCCCCCCCceeechhhccHHHHHhhCHHHHHHHHHHHcc--CcccccccccCCcccccc
Q 008157 512 FSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMVS--DVLSSWLASLPNFINYFR 575 (576)
Q Consensus 512 ~SnP~i~~~f~~~~cYFNSGVmLiDL~kWRk~nit~k~~~w~kln~--d~~LwklGsLPp~Ll~F~ 575 (576)
|++|.+...|+++.||||+|||||||++||++++|+++++|++.+. +..+|+.|+|||++++|+
T Consensus 397 ~s~p~i~~yFn~~~cYfNsGVlLINLk~WRe~nITek~l~~l~~n~~~~l~l~DQdaLp~~LivF~ 462 (534)
T PLN02659 397 FSHPLIAKNFDPNECAWAYGMNIFDLEAWRKTNISSTYHHWLEENLKSDLSLWQLGTLPPGLIAFH 462 (534)
T ss_pred ccchhhhhccCccccceecceeEeeHHHHHhcChHHHHHHHHHhcccccccccccccchHHHHHhc
Confidence 9999998899999999999999999999999999999999998774 568899999999999986
No 9
>PLN02523 galacturonosyltransferase
Probab=100.00 E-value=1e-89 Score=741.15 Aligned_cols=387 Identities=46% Similarity=0.797 Sum_probs=346.8
Q ss_pred chhHHHhhhhHHHHHHhhcccccc---CC--chHHHHHHHHHHHHHHH-----h-hccC--CCC----CCCChhHHHHHH
Q 008157 188 PDFRVRQLKDQLIKAKVYLSLPAM---RN--NANFVRELRLRIKEVQR-----A-LGDA--TKD----SDLPRIANDRLK 250 (576)
Q Consensus 188 ~d~~~~~l~dql~~a~~Y~~~a~~---~~--~~~l~~el~~~i~e~~~-----~-l~~a--~~d----~~l~~~~~~~~~ 250 (576)
-|.+.|+-.|-..++-||.+.|.- .+ +.++--||..+.-++.. . +++. +.| .+||+++.++||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 159 (559)
T PLN02523 80 LDQIRKQADDHRTLVNAYAAYARKLKLDNSKLLRLFADLSRNFTDLISKPSYRALLSSDGSAIDEDVLRQFEKEVKERVK 159 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhHHHHhhcCccccccccccCCcCchHHHhhcchhHHHHHH
Confidence 488999999999999999877732 11 12223355555554432 1 1111 111 348999999999
Q ss_pred HHHHHHHhhccCCcChHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhccCCCcccccccccchhhhcCCccCCC--CC
Q 008157 251 AMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTAKTLPKGLHCLPLRLTTEYYTLNSSQRH--FP 328 (576)
Q Consensus 251 ~m~~~i~~ak~~~~d~~~~~~klr~~l~~~ee~~~~~~~q~~~~~~laa~~~PK~lhcL~~rla~ey~~~~~~~~~--~p 328 (576)
.|+++|++||+ .|||.++++|||+|++++||+++++|+|++|++||||+|+|||||||+||||+|||.+++.+++ .|
T Consensus 160 ~~~~~~~~a~~-~~d~~~~~~kl~~~~~~~e~~~~~~~~q~~~~~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~~~ 238 (559)
T PLN02523 160 VARQMIAESKE-SFDNQLKIQKLKDTIFAVNEQLTKAKKNGAFASLIAAKSIPKSLHCLAMRLMEERIAHPEKYKDEGKP 238 (559)
T ss_pred HHHHHHHHHHh-hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHhHHHHHhChHhhhccCCC
Confidence 99999999997 7899999999999999999999999999999999999999999999999999999999876543 45
Q ss_pred CCcCCCCCCceEEEEEeccccccccchhhhhcccCCCCceEEEEEeCCCCHHHHHHHHhhCCCCCceeEEeehhhhhhcc
Q 008157 329 NQEKLEDPRLFHYALFSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLN 408 (576)
Q Consensus 329 ~~~~l~dp~~iHIa~~sDNvlaasVvInSiv~N~~~Pe~ivFHIVTD~~s~~amk~WF~~n~~~~a~IeV~nie~F~wL~ 408 (576)
++++++||+++|||++|||++|++|+|+||+.|+++|++++||||||++++++|++||..|++++++|+|+++|+|+|++
T Consensus 239 ~~~~l~dp~l~Hy~ifSdNvlAAsVvInStv~Ns~~p~~~VFHIVTD~ln~~amk~Wf~~n~~~~a~I~V~~Iedf~~ln 318 (559)
T PLN02523 239 PPPELEDPSLYHYAIFSDNVIAASVVVNSAVKNAKEPWKHVFHVVTDRMNLAAMKVMFKMRDLNGAHVEVKAVEDYKFLN 318 (559)
T ss_pred cchhccCCCcceEEEecCcchhhhhhHHHHHHccCCCcceEEEEEeCCCCHHHHHHHHhhCCCCCcEEEEEEeehhhhcc
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchhhhhhccccceEEEecccccC---CccccccCCCCcchhhhhhhhhhhcccCCCCeEEEEecceeeecCchHHhc
Q 008157 409 SSYSPVLKQLNSQSMIDYYFRAHRAN---SDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWS 485 (576)
Q Consensus 409 ~~y~PvLkql~~~~~~~y~F~~~~~~---s~~~~k~r~p~y~S~~~y~Rf~LPeLlP~ldKVLYLD~DvIV~~DLseLw~ 485 (576)
.+|+|+++++++++++.|||.++... ...++++|+|+|+|+++|+|||||++||+++||||||+|+||++||++||+
T Consensus 319 ~~~~pvlk~l~s~~~~~~~f~~~~~~~~~~~~~~k~~~p~ylS~~ny~Rf~IPeLLP~ldKVLYLD~DVVVq~DLseLw~ 398 (559)
T PLN02523 319 SSYVPVLRQLESANLQKFYFENKLENATKDSSNMKFRNPKYLSMLNHLRFYLPEMYPKLHRILFLDDDVVVQKDLTGLWK 398 (559)
T ss_pred cccchHHHhhhhhhhhhhhccccccccccccccccccCcchhhHHHHHHHHHHHHhcccCeEEEEeCCEEecCCHHHHHh
Confidence 99999999999999999999865432 124678899999999999999999999999999999999999999999999
Q ss_pred cCCCCCeeEEeecccccccccccccccCChhhhcCCCCCCCceeechhhccHHHHHhhCHHHHHHHHHHHccCccccccc
Q 008157 486 IDLKGKVNGAVETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMVSDVLSSWLA 565 (576)
Q Consensus 486 iDL~gkviAAVedc~~~f~ry~~yLn~SnP~i~~~f~~~~cYFNSGVmLiDL~kWRk~nit~k~~~w~kln~d~~LwklG 565 (576)
+||+|+++|||+||...+++|..+++|++|.+...|+++.||||+|||||||++||++++|++++.|++++.+..+|+.|
T Consensus 399 iDL~gkv~aAVeDc~~~~~r~~~~ln~s~p~i~~yFNs~aC~wnsGVmlINL~~WRe~nITek~~~w~~ln~~~~l~Dqd 478 (559)
T PLN02523 399 IDMDGKVNGAVETCFGSFHRYAQYLNFSHPLIKEKFNPKACAWAYGMNIFDLDAWRREKCTEQYHYWQNLNENRTLWKLG 478 (559)
T ss_pred CcCCCceEEEehhhhhHHHHHHHhhcccchhhhhCcCCCcccccCCcEEEeHHHHHHhchHHHHHHHHHhcccccccccc
Confidence 99999999999999776788999999999999889999999999999999999999999999999999999999999999
Q ss_pred ccCCcccccc
Q 008157 566 SLPNFINYFR 575 (576)
Q Consensus 566 sLPp~Ll~F~ 575 (576)
+|||+|++|+
T Consensus 479 aLpp~LivF~ 488 (559)
T PLN02523 479 TLPPGLITFY 488 (559)
T ss_pred ccchHHHHhc
Confidence 9999999997
No 10
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=100.00 E-value=4.9e-42 Score=346.90 Aligned_cols=197 Identities=53% Similarity=0.862 Sum_probs=177.7
Q ss_pred eEEEEEeccccccccchhhhhcccCCCCceEEEEEeCCCCHHHHHHHHhhCCCCCceeEEeehhhhhhcccccchhhhhh
Q 008157 339 FHYALFSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQL 418 (576)
Q Consensus 339 iHIa~~sDNvlaasVvInSiv~N~~~Pe~ivFHIVTD~~s~~amk~WF~~n~~~~a~IeV~nie~F~wL~~~y~PvLkql 418 (576)
+|||+++||+++++|+++|++.||++|.+++|||+||+++.+.|+.||..++..++.|++..++++.|.+....+.++|+
T Consensus 1 ~hiv~~~Dn~l~~~v~i~S~l~nn~~~~~~~fhvvtd~~s~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~ 80 (257)
T cd06429 1 IHVVIFSDNRLAAAVVINSSISNNKDPSNLVFHIVTDNQNYGAMRSWFDLNPLKIATVKVLNFDDFKLLGKVKVDSLMQL 80 (257)
T ss_pred CCEEEEecchhHHHHHHHHHHHhCCCCCceEEEEecCccCHHHHHHHHHhcCCCCceEEEEEeCcHHhhcccccchhhhh
Confidence 69999999999999999999999999999999999999999999999999988899999999999888777666677877
Q ss_pred ccccceEEEecccccCCccccccCCCCcchhhhhhhhhhhcccCCCCeEEEEecceeeecCchHHhccCCCCCeeEEeec
Q 008157 419 NSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVET 498 (576)
Q Consensus 419 ~~~~~~~y~F~~~~~~s~~~~k~r~p~y~S~~~y~Rf~LPeLlP~ldKVLYLD~DvIV~~DLseLw~iDL~gkviAAVed 498 (576)
++.. .....+.++++++|.++|+||+||++||+++||||||+|+||++||++||++||+|+++|||+|
T Consensus 81 ~~~~------------~~~~~~~~~~~~~s~~~y~Rl~ip~llp~~~kvlYLD~Dviv~~dl~eL~~~dl~~~~~aav~d 148 (257)
T cd06429 81 ESEA------------DTSNLKQRKPEYISLLNFARFYLPELFPKLEKVIYLDDDVVVQKDLTELWNTDLGGGVAGAVET 148 (257)
T ss_pred hccc------------cccccccCCccccCHHHHHHHHHHHHhhhhCeEEEEeCCEEEeCCHHHHhhCCCCCCEEEEEhh
Confidence 6543 1223455678999999999999999999999999999999999999999999999999999987
Q ss_pred ccccccccccccccCChhhhcCCCCCCCceeechhhccHHHHHhhCHHHHHHHHHHHccCc--ccccccccCCcccccc
Q 008157 499 CGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMVSDV--LSSWLASLPNFINYFR 575 (576)
Q Consensus 499 c~~~f~ry~~yLn~SnP~i~~~f~~~~cYFNSGVmLiDL~kWRk~nit~k~~~w~kln~d~--~LwklGsLPp~Ll~F~ 575 (576)
|||||||||||++||++++++++++|++.+.++ .+|+.|++|+.+++|+
T Consensus 149 ----------------------------yfNsGV~linl~~wr~~~i~~~~~~~~~~~~~~~~~~~~~~dqd~ln~~~~ 199 (257)
T cd06429 149 ----------------------------SWNPGVNVVNLTEWRRQNVTETYEKWMELNQEEEVTLWKLITLPPGLIVFY 199 (257)
T ss_pred ----------------------------hcccceEEEeHHHHHhccHHHHHHHHHHHhhhcccchhhcCCccHHHHHcc
Confidence 689999999999999999999999999877653 6788899988888875
No 11
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=99.96 E-value=4.7e-29 Score=260.66 Aligned_cols=197 Identities=17% Similarity=0.231 Sum_probs=136.8
Q ss_pred CCceEEEEEecc-c-cccccchhhhhcccCCCCceEEEEEeCCCCHHHHHHHHhhCCCCCceeEEeehhhhhhcccccch
Q 008157 336 PRLFHYALFSDN-V-LAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSP 413 (576)
Q Consensus 336 p~~iHIa~~sDN-v-laasVvInSiv~N~~~Pe~ivFHIVTD~~s~~amk~WF~~n~~~~a~IeV~nie~F~wL~~~y~P 413 (576)
+..+|||+++|+ + .+++|+|.|++.|+++ ..+.|||++++++.+.++..-..-...+..+.+..+
T Consensus 23 ~~~i~Iv~~~D~ny~~~~~vsi~Sil~nn~~-~~~~f~Il~~~is~e~~~~l~~l~~~~~~~i~~~~i------------ 89 (334)
T PRK15171 23 KNSLDIAYGIDKNFLFGCGVSIASVLLNNPD-KSLVFHVFTDYISDADKQRFSALAKQYNTRINIYLI------------ 89 (334)
T ss_pred CCceeEEEECcHhhHHHHHHHHHHHHHhCCC-CCEEEEEEeCCCCHHHHHHHHHHHHhcCCeEEEEEe------------
Confidence 468999999995 5 6899999999999876 479999999999977654321110001122222211
Q ss_pred hhhhhccccceEEEecccccCCccccccCCCCcchhhhhhhhhhhcccCC-CCeEEEEecceeeecCchHHhccCCCCCe
Q 008157 414 VLKQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPR-LNKVLFLDDDVVVQKDLSGLWSIDLKGKV 492 (576)
Q Consensus 414 vLkql~~~~~~~y~F~~~~~~s~~~~k~r~p~y~S~~~y~Rf~LPeLlP~-ldKVLYLD~DvIV~~DLseLw~iDL~gkv 492 (576)
+..... .++...++|.++|+||+||++||+ ++||||||+|+||++||++||++||+|..
T Consensus 90 ---------------d~~~~~-----~~~~~~~~s~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~dl~~~~ 149 (334)
T PRK15171 90 ---------------NCERLK-----SLPSTKNWTYATYFRFIIADYFIDKTDKVLYLDADIACKGSIKELIDLDFAENE 149 (334)
T ss_pred ---------------CHHHHh-----CCcccCcCCHHHHHHHHHHHhhhhhcCEEEEeeCCEEecCCHHHHHhccCCCCe
Confidence 111000 011235789999999999999996 99999999999999999999999999766
Q ss_pred eEEe-ecccccccccccccccCChhhhcCCCC-CCCceeechhhccHHHHHhhCHHHHHHHHHHHcc--Cccc-------
Q 008157 493 NGAV-ETCGETFHRFDRYLNFSNPLISKNFDP-RACGWAYGMNIFDLDEWRRQNITDVYHTWQKMVS--DVLS------- 561 (576)
Q Consensus 493 iAAV-edc~~~f~ry~~yLn~SnP~i~~~f~~-~~cYFNSGVmLiDL~kWRk~nit~k~~~w~kln~--d~~L------- 561 (576)
+||| .|+...+ |.......+... ..+|||||||||||++||++++++++++++..+. .+..
T Consensus 150 ~aav~~d~~~~~--------~~~~~~~l~~~~~~~~YFNsGVlliNl~~wRe~~i~~k~~~~l~~~~~~~~~~~~DQDiL 221 (334)
T PRK15171 150 IAAVVAEGDAEW--------WSKRAQSLQTPGLASGYFNSGFLLINIPAWAQENISAKAIEMLADPEIVSRITHLDQDVL 221 (334)
T ss_pred EEEEEeccchhH--------HHHHHHhcCCccccccceecceEEEcHHHHHHhhHHHHHHHHHhccccccceeecChhHH
Confidence 6666 4553211 011111111211 2469999999999999999999999999997542 1111
Q ss_pred -----ccccccCCcccc
Q 008157 562 -----SWLASLPNFINY 573 (576)
Q Consensus 562 -----wklGsLPp~Ll~ 573 (576)
-+...||+.|++
T Consensus 222 N~~~~~~~~~L~~~wN~ 238 (334)
T PRK15171 222 NILLAGKVKFIDAKYNT 238 (334)
T ss_pred HHHHcCCeEECCHhhCC
Confidence 245678888875
No 12
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=99.95 E-value=8.1e-28 Score=238.22 Aligned_cols=193 Identities=21% Similarity=0.294 Sum_probs=143.7
Q ss_pred eEEEEEecc-c-cccccchhhhhcccCCCCceEEEEEeCCCCHHHH---HHHHhhCCCCCceeEEeehhhhhhcccccch
Q 008157 339 FHYALFSDN-V-LAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAM---RMWFLANPPGRATVQVQNIEEFTWLNSSYSP 413 (576)
Q Consensus 339 iHIa~~sDN-v-laasVvInSiv~N~~~Pe~ivFHIVTD~~s~~am---k~WF~~n~~~~a~IeV~nie~F~wL~~~y~P 413 (576)
+|||+++|. + .+++|+++|+++|+++ +.+.|||++++++...+ +.++.. .+..|++..++. +
T Consensus 1 ~~I~~~~d~~y~~~~~~~l~Sl~~~~~~-~~~~~~il~~~is~~~~~~L~~~~~~---~~~~i~~~~i~~---------~ 67 (248)
T cd04194 1 MNIVFAIDDNYAPYLAVTIKSILANNSK-RDYDFYILNDDISEENKKKLKELLKK---YNSSIEFIKIDN---------D 67 (248)
T ss_pred CCEEEEecHhhHHHHHHHHHHHHhcCCC-CceEEEEEeCCCCHHHHHHHHHHHHh---cCCeEEEEEcCH---------H
Confidence 699999996 5 5899999999999997 47999999999876543 333221 123344433321 0
Q ss_pred hhhhhccccceEEEecccccCCccccccCCCCcchhhhhhhhhhhcccCCCCeEEEEecceeeecCchHHhccCCCCCee
Q 008157 414 VLKQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVN 493 (576)
Q Consensus 414 vLkql~~~~~~~y~F~~~~~~s~~~~k~r~p~y~S~~~y~Rf~LPeLlP~ldKVLYLD~DvIV~~DLseLw~iDL~gkvi 493 (576)
... ... ....+++..+|+||++|+++|+++||||||+|+||++||++||++|++|+++
T Consensus 68 ~~~---------------------~~~-~~~~~~~~~~y~rl~l~~ll~~~~rvlylD~D~lv~~di~~L~~~~~~~~~~ 125 (248)
T cd04194 68 DFK---------------------FFP-ATTDHISYATYYRLLIPDLLPDYDKVLYLDADIIVLGDLSELFDIDLGDNLL 125 (248)
T ss_pred HHh---------------------cCC-cccccccHHHHHHHHHHHHhcccCEEEEEeCCEEecCCHHHHhcCCcCCCEE
Confidence 000 000 0135678899999999999999999999999999999999999999999999
Q ss_pred EEeecccccccccccccccCChhhhcCCCCCCCceeechhhccHHHHHhhCHHHHHHHHHHHccCcc-----------cc
Q 008157 494 GAVETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMVSDVL-----------SS 562 (576)
Q Consensus 494 AAVedc~~~f~ry~~yLn~SnP~i~~~f~~~~cYFNSGVmLiDL~kWRk~nit~k~~~w~kln~d~~-----------Lw 562 (576)
|||.||......... ...+.....+||||||||+|+++||+.++++++++|++.+.... ++
T Consensus 126 aa~~d~~~~~~~~~~--------~~~~~~~~~~yfNsGv~l~nl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~ 197 (248)
T cd04194 126 AAVRDPFIEQEKKRK--------RRLGGYDDGSYFNSGVLLINLKKWREENITEKLLELIKEYGGRLIYPDQDILNAVLK 197 (248)
T ss_pred EEEecccHHHHHHHH--------hhcCCCcccceeeecchheeHHHHHHhhhHHHHHHHHHhCCCceeeCChHHHHHHHh
Confidence 999999753211100 01233446789999999999999999999999999998765421 12
Q ss_pred -cccccCCccccc
Q 008157 563 -WLASLPNFINYF 574 (576)
Q Consensus 563 -klGsLPp~Ll~F 574 (576)
+...||+.|+..
T Consensus 198 ~~~~~L~~~~N~~ 210 (248)
T cd04194 198 DKILYLPPRYNFQ 210 (248)
T ss_pred CCeEEcCcccccc
Confidence 377899998864
No 13
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=99.95 E-value=5.7e-28 Score=240.23 Aligned_cols=195 Identities=18% Similarity=0.252 Sum_probs=136.8
Q ss_pred eEEEEEec--cc-cccccchhhhhcccCCCCceEEEEEeCCCCHHHHHHHHhhCCCCCceeEEeehhhhhhcccccchhh
Q 008157 339 FHYALFSD--NV-LAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVL 415 (576)
Q Consensus 339 iHIa~~sD--Nv-laasVvInSiv~N~~~Pe~ivFHIVTD~~s~~amk~WF~~n~~~~a~IeV~nie~F~wL~~~y~PvL 415 (576)
||||++++ ++ .+++|++.|+++|+++ .++|||++++++.+..+.+-......+..+++..++. . .+
T Consensus 1 ~~i~~~a~d~~y~~~~~v~i~Sl~~~~~~--~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~~~---~--~~---- 69 (246)
T cd00505 1 IAIVIVATGDEYLRGAIVLMKSVLRHRTK--PLRFHVLTNPLSDTFKAALDNLRKLYNFNYELIPVDI---L--DS---- 69 (246)
T ss_pred CeEEEEecCcchhHHHHHHHHHHHHhCCC--CeEEEEEEccccHHHHHHHHHHHhccCceEEEEeccc---c--Cc----
Confidence 57777774 44 5899999999999986 6999999999988755433221111123333332210 0 00
Q ss_pred hhhccccceEEEecccccCCccccccCCCCcchhhhhhhhhhhcccCCCCeEEEEecceeeecCchHHhccCCCCCeeEE
Q 008157 416 KQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGA 495 (576)
Q Consensus 416 kql~~~~~~~y~F~~~~~~s~~~~k~r~p~y~S~~~y~Rf~LPeLlP~ldKVLYLD~DvIV~~DLseLw~iDL~gkviAA 495 (576)
.... ...++++..+|+||++|+++|+++||||||+|+||++||++||++|++|+++||
T Consensus 70 ---------------------~~~~-~~~~~~~~~~y~RL~i~~llp~~~kvlYLD~D~iv~~di~~L~~~~l~~~~~aa 127 (246)
T cd00505 70 ---------------------VDSE-HLKRPIKIVTLTKLHLPNLVPDYDKILYVDADILVLTDIDELWDTPLGGQELAA 127 (246)
T ss_pred ---------------------chhh-hhcCccccceeHHHHHHHHhhccCeEEEEcCCeeeccCHHHHhhccCCCCeEEE
Confidence 0000 012567889999999999999999999999999999999999999999999999
Q ss_pred eeccccccc-ccccccccCChhhhcCCCCCCCceeechhhccHHHHHhhCHHHHHHHHHHHcc------Cc-----cccc
Q 008157 496 VETCGETFH-RFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMVS------DV-----LSSW 563 (576)
Q Consensus 496 Vedc~~~f~-ry~~yLn~SnP~i~~~f~~~~cYFNSGVmLiDL~kWRk~nit~k~~~w~kln~------d~-----~Lwk 563 (576)
|+||..... .+.. ...+...+.+|||||||||||++||++++.+++.++...+. |. .+++
T Consensus 128 v~d~~~~~~~~~~~--------~~~~~~~~~~yfNsGVmlinl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~ 199 (246)
T cd00505 128 APDPGDRREGKYYR--------QKRSHLAGPDYFNSGVFVVNLSKERRNQLLKVALEKWLQSLSSLSGGDQDLLNTFFKQ 199 (246)
T ss_pred ccCchhhhccchhh--------cccCCCCCCCceeeeeEEEechHHHHHHHHHHHHHHHHhhcccCccCCcHHHHHHHhc
Confidence 999974211 1110 01133345789999999999999998888888777654332 21 1233
Q ss_pred ----ccccCCccccc
Q 008157 564 ----LASLPNFINYF 574 (576)
Q Consensus 564 ----lGsLPp~Ll~F 574 (576)
...||+.|+..
T Consensus 200 ~~~~i~~L~~~wN~~ 214 (246)
T cd00505 200 VPFIVKSLPCIWNVR 214 (246)
T ss_pred CCCeEEECCCeeeEE
Confidence 67899988863
No 14
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=99.93 E-value=1.8e-26 Score=232.24 Aligned_cols=200 Identities=19% Similarity=0.249 Sum_probs=128.5
Q ss_pred eEEEEEec-c-c-cccccchhhhhcccCCCCceEEEEEeCCCCHHHHHHHHhhC-CCCCceeEEeehhhhhhcccccchh
Q 008157 339 FHYALFSD-N-V-LAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLAN-PPGRATVQVQNIEEFTWLNSSYSPV 414 (576)
Q Consensus 339 iHIa~~sD-N-v-laasVvInSiv~N~~~Pe~ivFHIVTD~~s~~amk~WF~~n-~~~~a~IeV~nie~F~wL~~~y~Pv 414 (576)
|||+.... + + .+++|++.|++.|+. .++.|||++++++.+..+. +..- ...+..+++..++ |.. +
T Consensus 1 ini~~~~~~~~y~~~~~v~l~Sll~nn~--~~~~fyil~~~is~e~~~~-l~~~~~~~~~~i~~i~i~---~~~--~--- 69 (248)
T cd06432 1 INIFSVASGHLYERFLRIMMLSVMKNTK--SPVKFWFIKNFLSPQFKEF-LPEMAKEYGFEYELVTYK---WPR--W--- 69 (248)
T ss_pred CeEEEEcCcHHHHHHHHHHHHHHHHcCC--CCEEEEEEeCCCCHHHHHH-HHHHHHHhCCceEEEEec---Chh--h---
Confidence 46555543 3 4 689999999999985 4799999999998764322 1110 0012222222211 000 0
Q ss_pred hhhhccccceEEEecccccCCccccccCCCCcchhhhhhhhhhhcccCC-CCeEEEEecceeeecCchHHhccCCCCCee
Q 008157 415 LKQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPR-LNKVLFLDDDVVVQKDLSGLWSIDLKGKVN 493 (576)
Q Consensus 415 Lkql~~~~~~~y~F~~~~~~s~~~~k~r~p~y~S~~~y~Rf~LPeLlP~-ldKVLYLD~DvIV~~DLseLw~iDL~gkvi 493 (576)
+ . ..+...+ ...+|.|++++++||. ++||||||+|+||.+||++||++||+|+++
T Consensus 70 ~------------------~-----~~~~~~~-~~~~y~rL~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~dl~~~~~ 125 (248)
T cd06432 70 L------------------H-----KQTEKQR-IIWGYKILFLDVLFPLNVDKVIFVDADQIVRTDLKELMDMDLKGAPY 125 (248)
T ss_pred h------------------h-----cccccch-hHHHHHHHHHHHhhhhccCEEEEEcCCceecccHHHHHhcCcCCCeE
Confidence 0 0 0000011 2457899999999996 999999999999999999999999999999
Q ss_pred EEeecccccccccccccccCChhhhcCCCCCCCceeechhhccHHHHHhhCHHHHHHHHHH---HccCcc----------
Q 008157 494 GAVETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQK---MVSDVL---------- 560 (576)
Q Consensus 494 AAVedc~~~f~ry~~yLn~SnP~i~~~f~~~~cYFNSGVmLiDL~kWRk~nit~k~~~w~k---ln~d~~---------- 560 (576)
|||+||.... +......|.......++ +...|||||||||||++||++++++++.++++ .+..+.
T Consensus 126 Aav~d~~~~~-~~~~~~~~~~~~~~~~l-~~~~YfNSGVmliNL~~wR~~~i~~~~~~~~~~l~~~~~~l~~~DQDiLN~ 203 (248)
T cd06432 126 GYTPFCDSRK-EMDGFRFWKQGYWKSHL-RGRPYHISALYVVDLKRFRRIAAGDRLRGQYQQLSQDPNSLANLDQDLPNN 203 (248)
T ss_pred EEeeccccch-hcccchhhhhhhhhhhc-CCCCccceeeEEEeHHHHHHHhHHHHHHHHHHHHhcCCCccccCCchhhHH
Confidence 9999997421 10100011111111122 23569999999999999999999998777664 222221
Q ss_pred -c-cc-ccccCCcccccc
Q 008157 561 -S-SW-LASLPNFINYFR 575 (576)
Q Consensus 561 -L-wk-lGsLPp~Ll~F~ 575 (576)
+ ++ .-.||+.|+.+.
T Consensus 204 v~~~~~i~~Lp~~w~~~~ 221 (248)
T cd06432 204 MQHQVPIFSLPQEWLWCE 221 (248)
T ss_pred HhccCCeEECChHHHHHH
Confidence 1 22 667999887753
No 15
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=99.93 E-value=3.3e-26 Score=234.28 Aligned_cols=176 Identities=24% Similarity=0.365 Sum_probs=122.2
Q ss_pred EEEEEeccc-cccccchhhhhcccCCCCceEEEEEeCCCCHHHHHHHHhhCCCCCceeEEeehhhhhhcccccchhhhhh
Q 008157 340 HYALFSDNV-LAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQL 418 (576)
Q Consensus 340 HIa~~sDNv-laasVvInSiv~N~~~Pe~ivFHIVTD~~s~~amk~WF~~n~~~~a~IeV~nie~F~wL~~~y~PvLkql 418 (576)
-||++.+|+ .+++|+|+|++.|+.. .++|||++|+++.+.++.+...-...+..|.+..++++. ..+
T Consensus 4 ~iv~~~~~y~~~~~~~i~Sil~n~~~--~~~fhii~d~~s~~~~~~l~~~~~~~~~~i~f~~i~~~~---~~~------- 71 (280)
T cd06431 4 AIVCAGYNASRDVVTLVKSVLFYRRN--PLHFHLITDEIARRILATLFQTWMVPAVEVSFYNAEELK---SRV------- 71 (280)
T ss_pred EEEEccCCcHHHHHHHHHHHHHcCCC--CEEEEEEECCcCHHHHHHHHHhccccCcEEEEEEhHHhh---hhh-------
Confidence 367777776 6899999999999853 599999999999887776654433334555555443221 000
Q ss_pred ccccceEEEecccccCCccccccCCCCcch-hhhhhhhhhhcccCC-CCeEEEEecceeeecCchHHhcc--CCCC-Cee
Q 008157 419 NSQSMIDYYFRAHRANSDSNLKFRNPKYLS-ILNHLRFYLPEVFPR-LNKVLFLDDDVVVQKDLSGLWSI--DLKG-KVN 493 (576)
Q Consensus 419 ~~~~~~~y~F~~~~~~s~~~~k~r~p~y~S-~~~y~Rf~LPeLlP~-ldKVLYLD~DvIV~~DLseLw~i--DL~g-kvi 493 (576)
. ...+ .+++ ..+|+||+||++||+ ++||||||+|+||++||++||++ |+.| +++
T Consensus 72 ---------------~-----~~~~-~~~s~~y~y~RL~ip~llp~~~dkvLYLD~Diiv~~di~eL~~~~~~~~~~~~~ 130 (280)
T cd06431 72 ---------------S-----WIPN-KHYSGIYGLMKLVLTEALPSDLEKVIVLDTDITFATDIAELWKIFHKFTGQQVL 130 (280)
T ss_pred ---------------c-----cCcc-cchhhHHHHHHHHHHHhchhhcCEEEEEcCCEEEcCCHHHHHHHhhhcCCCcEE
Confidence 0 0011 2334 448899999999995 99999999999999999999999 7766 577
Q ss_pred EEeecccccccccccccccCChhhhcCCCCCCCceeechhhccHHHHHhhCHHHHHHHHHHH
Q 008157 494 GAVETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKM 555 (576)
Q Consensus 494 AAVedc~~~f~ry~~yLn~SnP~i~~~f~~~~cYFNSGVmLiDL~kWRk~nit~k~~~w~kl 555 (576)
|||++...-+ .... +. ....+.....|||||||||||++||++++++++....+.
T Consensus 131 a~v~~~~~~~---~~~~-~~---~~~~~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~ 185 (280)
T cd06431 131 GLVENQSDWY---LGNL-WK---NHRPWPALGRGFNTGVILLDLDKLRKMKWESMWRLTAER 185 (280)
T ss_pred EEeccchhhh---hhhh-hh---ccCCCcccccceeeeeeeeeHHHHHhhCHHHHHHHHHHH
Confidence 7777653211 1100 00 000111123599999999999999999999998766543
No 16
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
Probab=99.92 E-value=1.7e-25 Score=233.11 Aligned_cols=179 Identities=26% Similarity=0.360 Sum_probs=132.2
Q ss_pred ceEEEEEecc-c-cccccchhhhhcccCCCCceEEEEEeCCCCHHHHHHHHhhCCCCCc--eeEEeehhhhhhcccccch
Q 008157 338 LFHYALFSDN-V-LAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRA--TVQVQNIEEFTWLNSSYSP 413 (576)
Q Consensus 338 ~iHIa~~sDN-v-laasVvInSiv~N~~~Pe~ivFHIVTD~~s~~amk~WF~~n~~~~a--~IeV~nie~F~wL~~~y~P 413 (576)
.++||+++|+ | .+++|+|.|++.|++. -.+.||+++|+++.+.++..-..-.+-+. .+.+..++.|
T Consensus 2 ~~~Iv~a~D~nY~~~~gvsI~SiL~~n~~-~~~~fhil~~~i~~e~~~~l~~~~~~f~~~i~~~~id~~~~--------- 71 (325)
T COG1442 2 TIPIAFAFDKNYLIPAGVSIYSLLEHNRK-IFYKFHILVDGLNEEDKKKLNETAEPFKSFIVLEVIDIEPF--------- 71 (325)
T ss_pred cccEEEEcccccchhHHHHHHHHHHhCcc-ccEEEEEEecCCCHHHHHHHHHHHHhhccceeeEEEechhh---------
Confidence 4789999995 5 6899999999999996 36999999999998765432221111111 1111111111
Q ss_pred hhhhhccccceEEEecccccCCccccccC-CCCcchhhhhhhhhhhcccCCCCeEEEEecceeeecCchHHhccCCCCCe
Q 008157 414 VLKQLNSQSMIDYYFRAHRANSDSNLKFR-NPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKV 492 (576)
Q Consensus 414 vLkql~~~~~~~y~F~~~~~~s~~~~k~r-~p~y~S~~~y~Rf~LPeLlP~ldKVLYLD~DvIV~~DLseLw~iDL~gkv 492 (576)
. .+. ..+.+|.++|+||+||++||+.+|+||||+|+||.|||++||.+|+++++
T Consensus 72 --------------------~-----~~~~~~~~~s~~v~~R~fiadlf~~~dK~lylD~Dvi~~g~l~~lf~~~~~~~~ 126 (325)
T COG1442 72 --------------------L-----DYPPFTKRFSKMVLVRYFLADLFPQYDKMLYLDVDVIFCGDLSELFFIDLEEYY 126 (325)
T ss_pred --------------------h-----cccccccchHHHHHHHHHHHHhccccCeEEEEecCEEEcCcHHHHHhcCCCcce
Confidence 0 011 23678899999999999999999999999999999999999999999999
Q ss_pred eEEeecccccccccccccccCChhhhc-CCCCCCCceeechhhccHHHHHhhCHHHHHHHHHHHccCc
Q 008157 493 NGAVETCGETFHRFDRYLNFSNPLISK-NFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMVSDV 559 (576)
Q Consensus 493 iAAVedc~~~f~ry~~yLn~SnP~i~~-~f~~~~cYFNSGVmLiDL~kWRk~nit~k~~~w~kln~d~ 559 (576)
+|||.|+..-.. . +...++ .......|||+|||++|++.||+++++++++++++...+.
T Consensus 127 ~aaV~D~~~~~~---~-----~~~~~~~~~~~~~~yFNaG~llinl~~W~~~~i~~k~i~~~~~~~~~ 186 (325)
T COG1442 127 LAAVRDVFSHYM---K-----EGALRLEKGDLEGSYFNAGVLLINLKLWREENIFEKLIELLKDKEND 186 (325)
T ss_pred EEEEeehhhhhh---h-----hhhhHhhhcccccccCccceeeehHHHHHHhhhHHHHHHHHhccccc
Confidence 999999864210 0 000011 1123478999999999999999999999999998655443
No 17
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=99.92 E-value=3.7e-25 Score=213.90 Aligned_cols=201 Identities=23% Similarity=0.336 Sum_probs=130.2
Q ss_pred EEEEEecc-c-cccccchhhhhcccCCCCceEEEEEeCCCCHHHHHHHHhhCCCCCceeEEeehhhhhhcccccchhhhh
Q 008157 340 HYALFSDN-V-LAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQ 417 (576)
Q Consensus 340 HIa~~sDN-v-laasVvInSiv~N~~~Pe~ivFHIVTD~~s~~amk~WF~~n~~~~a~IeV~nie~F~wL~~~y~PvLkq 417 (576)
||++++|. + .+++|+++|++.|++++..++|||++++.+.+.++..-..........
T Consensus 1 ~i~~~~d~~y~~~~~v~i~Sl~~~~~~~~~~~i~i~~~~~~~~~~~~l~~~~~~~~~~~--------------------- 59 (250)
T PF01501_consen 1 HIVLACDDNYLEGAAVLIKSLLKNNPDPSNLHIYIITDDISEEDFEKLRALAAEVIEIE--------------------- 59 (250)
T ss_dssp -EEEECSGGGHHHHHHHHHHHHHTTTT-SSEEEEEEESSS-HHHHHHHHHHSCCCCTTE---------------------
T ss_pred CEEEEeCHHHHHHHHHHHHHHHHhccccccceEEEecCCCCHHHHHHHhhhccccccee---------------------
Confidence 89999995 5 689999999999999888899999999998776554322211100000
Q ss_pred hccccceEEEecccccCCccccccCCCCcchhhhhhhhhhhcccCCCCeEEEEecceeeecCchHHhccCCCCCeeEEee
Q 008157 418 LNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVE 497 (576)
Q Consensus 418 l~~~~~~~y~F~~~~~~s~~~~k~r~p~y~S~~~y~Rf~LPeLlP~ldKVLYLD~DvIV~~DLseLw~iDL~gkviAAVe 497 (576)
...+.................+++..+|+||++|++||+++||||||+|+||.+||++||+++++|+.+|||+
T Consensus 60 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~i~~ll~~~drilyLD~D~lv~~dl~~lf~~~~~~~~~~a~~ 132 (250)
T PF01501_consen 60 -------PIEFPDISMLEEFQFNSPSKRHFSPATFARLFIPDLLPDYDRILYLDADTLVLGDLDELFDLDLQGKYLAAVE 132 (250)
T ss_dssp -------CEEETSGGHHH--TTS-HCCTCGGGGGGGGGGHHHHSTTSSEEEEE-TTEEESS-SHHHHC---TTSSEEEEE
T ss_pred -------eeccchHHhhhhhhhcccccccccHHHHHHhhhHHHHhhcCeEEEEcCCeeeecChhhhhcccchhhhccccc
Confidence 0011100000000001122367889999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccccccCChhhhcCCCCCCCceeechhhccHHHHHhhCHHHHHHHHHHHccCcc-----------c-cccc
Q 008157 498 TCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMVSDVL-----------S-SWLA 565 (576)
Q Consensus 498 dc~~~f~ry~~yLn~SnP~i~~~f~~~~cYFNSGVmLiDL~kWRk~nit~k~~~w~kln~d~~-----------L-wklG 565 (576)
++... . ......+..........+|||+|||++|+++||++++.+++..|++.+.... + -+..
T Consensus 133 ~~~~~--~---~~~~~~~~~~~~~~~~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DQ~~ln~~~~~~~~ 207 (250)
T PF01501_consen 133 DESFD--N---FPNKRFPFSERKQPGNKPYFNSGVMLFNPSKWRKENILQKLIEWLEQNGMKLGFPDQDILNIVFYGNIK 207 (250)
T ss_dssp ----H--H---HHTSTTSSEEECESTTTTSEEEEEEEEEHHHHHHHHHHHHHHHHHHHTTTT-SSCHHHHHHHHHTTGEE
T ss_pred cchhh--h---hhhcccchhhcccCcccccccCcEEEEeechhhhhhhhhhhhhhhhhcccccCcCchHHHhhhccceeE
Confidence 94311 0 0011111111123345899999999999999999999999999988765411 1 1345
Q ss_pred ccCCcccc
Q 008157 566 SLPNFINY 573 (576)
Q Consensus 566 sLPp~Ll~ 573 (576)
.||+.|+.
T Consensus 208 ~L~~~~N~ 215 (250)
T PF01501_consen 208 PLPCRYNC 215 (250)
T ss_dssp EEEGGGSE
T ss_pred EECchhcc
Confidence 67777765
No 18
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=99.89 E-value=4.1e-23 Score=213.56 Aligned_cols=189 Identities=16% Similarity=0.338 Sum_probs=122.7
Q ss_pred eEEEEEe-c-cccccccchhhhhcccCCCCceEEEEEeCCCCHHH----HHHHHhhCCCCCcee--EEeehhhhhhcccc
Q 008157 339 FHYALFS-D-NVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAA----MRMWFLANPPGRATV--QVQNIEEFTWLNSS 410 (576)
Q Consensus 339 iHIa~~s-D-NvlaasVvInSiv~N~~~Pe~ivFHIVTD~~s~~a----mk~WF~~n~~~~a~I--eV~nie~F~wL~~~ 410 (576)
+|+|+.+ + +...+-|+|+|++.|+. ..++|||++|+...+. ++.|=.... ..+ .+.
T Consensus 1 ~~~~vv~~g~~~~~~~~~lkSil~~n~--~~l~Fhi~~d~~~~~~~~~~l~~~~~~~~---~~i~~~i~----------- 64 (304)
T cd06430 1 MHLAVVACGERLEETLTMLKSAIVFSQ--KPLRFHIFAEDQLKQSFKEKLDDWPELID---RKFNYTLH----------- 64 (304)
T ss_pred CEEEEEEcCCcHHHHHHHHHHHHHhCC--CCEEEEEEECCccCHHHHHHHHHHHHhcc---ceeeeEEE-----------
Confidence 4665555 3 44578999999999985 4699999999843222 333311100 001 010
Q ss_pred cchhhhhhccccceEEEecccccCCccccccCCCCcchhhhhhhhhhhcccCCCCeEEEEecceeeecCchHHhcc--CC
Q 008157 411 YSPVLKQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSI--DL 488 (576)
Q Consensus 411 y~PvLkql~~~~~~~y~F~~~~~~s~~~~k~r~p~y~S~~~y~Rf~LPeLlP~ldKVLYLD~DvIV~~DLseLw~i--DL 488 (576)
| ..|.... ...+ ...+++.+|+||++|++||+++||||||+|+||.+||++||++ |+
T Consensus 65 --~------------I~~P~~~-----~~~w--s~l~~~~~y~RL~ip~lLp~~dkvLYLD~Dii~~~dI~eL~~~~~df 123 (304)
T cd06430 65 --P------------ITFPSGN-----AAEW--KKLFKPCAAQRLFLPSLLPDVDSLLYVDTDILFLRPVEEIWSFLKKF 123 (304)
T ss_pred --E------------EecCccc-----hhhh--hhcccHHHHHHHHHHHHhhhhceEEEeccceeecCCHHHHHHHHhhc
Confidence 0 1121110 0011 1356679999999999999999999999999999999999999 99
Q ss_pred CCC-eeEEeecccc-cccccccccccCChhhhcCCCCCCCceeechhhccHHHHHh-----------hCHHHHHHHHHHH
Q 008157 489 KGK-VNGAVETCGE-TFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRR-----------QNITDVYHTWQKM 555 (576)
Q Consensus 489 ~gk-viAAVedc~~-~f~ry~~yLn~SnP~i~~~f~~~~cYFNSGVmLiDL~kWRk-----------~nit~k~~~w~kl 555 (576)
+|+ ++|++++-.. +...|... ..+ ++. ...|||||||+|||++||+ .++++++..+++.
T Consensus 124 ~~~~~aA~v~e~~~~~~~~~~~~--~~~-----~~~-~~~gFNSGVmLmNL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (304)
T cd06430 124 NSTQLAAMAPEHEEPNIGWYNRF--ARH-----PYY-GKTGVNSGVMLMNLTRMRRKYFKNDMTPVGLRWEEILMPLYKK 195 (304)
T ss_pred CCCeEEEEEecccccchhhhhhh--ccc-----Ccc-cccccccceeeeeHHHHHhhhcccccchhhhhHHHHHHHHHHh
Confidence 996 4555555321 00011100 011 121 2357999999999999999 7889999999987
Q ss_pred ccCcccc-----------c----ccccCCccc
Q 008157 556 VSDVLSS-----------W----LASLPNFIN 572 (576)
Q Consensus 556 n~d~~Lw-----------k----lGsLPp~Ll 572 (576)
++.+..| + +-.||..|+
T Consensus 196 ~~~~l~~~DQDiLN~v~~~~p~~~~~Lp~~wN 227 (304)
T cd06430 196 YKLKITWGDQDLINIIFHHNPEMLYVFPCHWN 227 (304)
T ss_pred cccCCCCCCHHHHHHHHcCCCCeEEEcCcccc
Confidence 6644221 1 456888887
No 19
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=99.40 E-value=5.4e-13 Score=133.32 Aligned_cols=158 Identities=16% Similarity=0.119 Sum_probs=102.0
Q ss_pred cc-cccccchhhhhcccCCCCceEEEEE-eCCCCHHHHHHHHhhCCCCCceeEEeehhhhhhcccccchhhhhhccccce
Q 008157 347 NV-LAAAVVVNSTVTHAKHPSNHVFHIV-TDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLNSQSMI 424 (576)
Q Consensus 347 Nv-laasVvInSiv~N~~~Pe~ivFHIV-TD~~s~~amk~WF~~n~~~~a~IeV~nie~F~wL~~~y~PvLkql~~~~~~ 424 (576)
++ .+++|++.|+++|+++ +.+||+ +++++...++..-.. + .++..++.++ . +
T Consensus 11 ~Y~~~a~vl~~SL~~~~~~---~~~~vl~~~~is~~~~~~L~~~----~--~~~~~v~~i~---~---~----------- 64 (240)
T cd02537 11 DYLPGALVLGYSLRKVGSS---YDLVVLVTPGVSEESREALEEV----G--WIVREVEPID---P---P----------- 64 (240)
T ss_pred hHHHHHHHHHHHHHhcCCC---CCEEEEECCCCCHHHHHHHHHc----C--CEEEecCccC---C---c-----------
Confidence 55 5899999999999874 345554 556776654321111 1 1222222110 0 0
Q ss_pred EEEecccccCCccccccCCCCcchhhhhhhhhhhcccCCCCeEEEEecceeeecCchHHhccCCCCCeeEEeeccccccc
Q 008157 425 DYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGETFH 504 (576)
Q Consensus 425 ~y~F~~~~~~s~~~~k~r~p~y~S~~~y~Rf~LPeLlP~ldKVLYLD~DvIV~~DLseLw~iDL~gkviAAVedc~~~f~ 504 (576)
.... ......+..+|.||+++++. .++||||||+|+||.+||++||++ ++.+||+.|+..
T Consensus 65 ----------~~~~---~~~~~~~~~~~~kl~~~~l~-~~drvlylD~D~~v~~~i~~Lf~~---~~~~~a~~d~~~--- 124 (240)
T cd02537 65 ----------DSAN---LLKRPRFKDTYTKLRLWNLT-EYDKVVFLDADTLVLRNIDELFDL---PGEFAAAPDCGW--- 124 (240)
T ss_pred ----------chhh---hccchHHHHHhHHHHhcccc-ccceEEEEeCCeeEccCHHHHhCC---CCceeeecccCc---
Confidence 0000 00124556789999999975 699999999999999999999987 677888877630
Q ss_pred ccccccccCChhhhcCCCCCCCceeechhhccHHHHHhhCHHHHHHHHHHHccC-----cc------ccc--ccccCCcc
Q 008157 505 RFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTWQKMVSD-----VL------SSW--LASLPNFI 571 (576)
Q Consensus 505 ry~~yLn~SnP~i~~~f~~~~cYFNSGVmLiDL~kWRk~nit~k~~~w~kln~d-----~~------Lwk--lGsLPp~L 571 (576)
..|||+|||+||+.. +..+.+.+++..+.. .. -.+ ...||+.|
T Consensus 125 --------------------~~~fNsGv~l~~~~~----~~~~~~~~~~~~~~~~~~~DQdiLN~~~~~~~~~~~l~~~y 180 (240)
T cd02537 125 --------------------PDLFNSGVFVLKPSE----ETFNDLLDALQDTPSFDGGDQGLLNSYFSDRGIWKRLPFTY 180 (240)
T ss_pred --------------------cccccceEEEEcCCH----HHHHHHHHHHhccCCCCCCCHHHHHHHHcCCCCEeECCcce
Confidence 358999999999954 455566666654332 11 134 66788887
Q ss_pred ccc
Q 008157 572 NYF 574 (576)
Q Consensus 572 l~F 574 (576)
+..
T Consensus 181 N~~ 183 (240)
T cd02537 181 NAL 183 (240)
T ss_pred eee
Confidence 753
No 20
>PLN00176 galactinol synthase
Probab=99.28 E-value=1e-11 Score=130.73 Aligned_cols=91 Identities=19% Similarity=0.291 Sum_probs=65.6
Q ss_pred hhhhhhhhhcccCCCCeEEEEecceeeecCchHHhccCCCCCeeEEeecccccc--cccccc-----------cccCChh
Q 008157 450 LNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGETF--HRFDRY-----------LNFSNPL 516 (576)
Q Consensus 450 ~~y~Rf~LPeLlP~ldKVLYLD~DvIV~~DLseLw~iDL~gkviAAVedc~~~f--~ry~~y-----------Ln~SnP~ 516 (576)
.+|.||.++++. +++||||||+|+||.++|++||+++ +..+|||.||..+. ..+..+ +.| |.
T Consensus 100 i~~tKl~iw~l~-~ydkvlyLDaD~lv~~nid~Lf~~~--~~~~aAV~dc~~~~~~~~~p~~~~~~c~~~~~~~~w--p~ 174 (333)
T PLN00176 100 INYSKLRIWEFV-EYSKMIYLDGDIQVFENIDHLFDLP--DGYFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVTW--PA 174 (333)
T ss_pred hhhhhhhhcccc-ccceEEEecCCEEeecChHHHhcCC--CcceEEEecccccccccccccccccccccchhhccc--hh
Confidence 467799999977 6999999999999999999999884 34689999996431 111110 111 11
Q ss_pred hhcCCCCCCCceeechhhccHHHHHhhCHHH
Q 008157 517 ISKNFDPRACGWAYGMNIFDLDEWRRQNITD 547 (576)
Q Consensus 517 i~~~f~~~~cYFNSGVmLiDL~kWRk~nit~ 547 (576)
. .+. +...||||||||||+..|+.+++.+
T Consensus 175 ~-~g~-~~~~yFNSGVlvinps~~~~~~ll~ 203 (333)
T PLN00176 175 E-LGP-PPPLYFNAGMFVFEPSLSTYEDLLE 203 (333)
T ss_pred h-ccC-CCCCeEEeEEEEEEcCHHHHHHHHH
Confidence 1 011 2367999999999999999877654
No 21
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=98.98 E-value=2.4e-10 Score=117.85 Aligned_cols=80 Identities=8% Similarity=0.098 Sum_probs=66.1
Q ss_pred cchhhhhhhhhhhcccCCCCeEEEEecceeeecCchHHhccCCCCCeeEEeecccccccccccccccCChhhhcCCCCCC
Q 008157 446 YLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGETFHRFDRYLNFSNPLISKNFDPRA 525 (576)
Q Consensus 446 y~S~~~y~Rf~LPeLlP~ldKVLYLD~DvIV~~DLseLw~iDL~gkviAAVedc~~~f~ry~~yLn~SnP~i~~~f~~~~ 525 (576)
.++. +|.||.++++ ++++||||||+|+||.++|.+||+++.. ..+||+. + .
T Consensus 76 ~~~~-~~tKl~~~~l-~~y~kvlyLDaD~l~~~~ideLf~~~~~-~~~Aap~-~-------------------------~ 126 (278)
T cd06914 76 YWAK-SLTKLRAFNQ-TEYDRIIYFDSDSIIRHPMDELFFLPNY-IKFAAPR-A-------------------------Y 126 (278)
T ss_pred cHHH-HHHHHHhccc-cceeeEEEecCChhhhcChHHHhcCCcc-cceeeec-C-------------------------c
Confidence 3443 4999999999 5799999999999999999999998833 3355543 1 0
Q ss_pred CceeechhhccHHHHHhhCHHHHHHHHHH
Q 008157 526 CGWAYGMNIFDLDEWRRQNITDVYHTWQK 554 (576)
Q Consensus 526 cYFNSGVmLiDL~kWRk~nit~k~~~w~k 554 (576)
-||||||||||+..|+.+++++++.+...
T Consensus 127 ~~FNSGvmvi~ps~~~~~~l~~~~~~~~~ 155 (278)
T cd06914 127 WKFASHLMVIKPSKEAFKELMTEILPAYL 155 (278)
T ss_pred ceecceeEEEeCCHHHHHHHHHHHHHhcc
Confidence 18999999999999999999999988764
No 22
>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism]
Probab=98.73 E-value=1.7e-08 Score=118.41 Aligned_cols=179 Identities=20% Similarity=0.294 Sum_probs=123.5
Q ss_pred ceEEEEEecc--c-cccccchhhhhcccCCCCceEEEEEeCCCCHHHHHHHHhhCCCCCceeEEeehhhhhhcccccchh
Q 008157 338 LFHYALFSDN--V-LAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPV 414 (576)
Q Consensus 338 ~iHIa~~sDN--v-laasVvInSiv~N~~~Pe~ivFHIVTD~~s~~amk~WF~~n~~~~a~IeV~nie~F~wL~~~y~Pv 414 (576)
.|||.-..-. | +-+-.+|.|+++|++.| +.|+++-.-++.. +|.-. +-+++.|.--
T Consensus 1181 vINIFSvASGHLYERflrIMm~SvlknTktp--VKFWfLkNyLSPt-FKe~i------------------P~mA~eYnFe 1239 (1470)
T KOG1879|consen 1181 VINIFSVASGHLYERFLRIMMLSVLKNTKTP--VKFWFLKNYLSPT-FKESI------------------PHMAKEYNFE 1239 (1470)
T ss_pred eEEEEeeccccHHHHHHHHHHHHHHhCCCCc--eeEEeehhhcChH-HHHHH------------------HHHHHHhCce
Confidence 6887765553 3 56889999999999987 8888877655421 11100 0011111000
Q ss_pred hhhhccccceEEEecccccCCccccccCCCCcchhhhhhhhhhhcccCC-CCeEEEEecceeeecCchHHhccCCCCCee
Q 008157 415 LKQLNSQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPR-LNKVLFLDDDVVVQKDLSGLWSIDLKGKVN 493 (576)
Q Consensus 415 Lkql~~~~~~~y~F~~~~~~s~~~~k~r~p~y~S~~~y~Rf~LPeLlP~-ldKVLYLD~DvIV~~DLseLw~iDL~gkvi 493 (576)
.++..|.+. ++-..+..+-| -+..|-=+||.-+||- ++||||+|+|-||..||.||.++||+|.+.
T Consensus 1240 ------yElv~YkWP--rWLhqQ~EKQR-----iiWgyKILFLDVLFPL~v~KvIfVDADQIVR~DL~EL~dfdl~GaPy 1306 (1470)
T KOG1879|consen 1240 ------YELVQYKWP--RWLHQQTEKQR-----IIWGYKILFLDVLFPLNVDKVIFVDADQIVRADLKELMDFDLGGAPY 1306 (1470)
T ss_pred ------EEEEEecCc--hhhhhhhhhhh-----hhhhhhhhhhhhccccccceEEEEcchHhhhhhhHHHHhcccCCCcc
Confidence 011111111 00000011112 2345667788889996 999999999999999999999999999999
Q ss_pred EEeecccccccccccccccCChhhhcCCCCCCCceeechhhccHHHHHhhCHHHHHHHH
Q 008157 494 GAVETCGETFHRFDRYLNFSNPLISKNFDPRACGWAYGMNIFDLDEWRRQNITDVYHTW 552 (576)
Q Consensus 494 AAVedc~~~f~ry~~yLn~SnP~i~~~f~~~~cYFNSGVmLiDL~kWRk~nit~k~~~w 552 (576)
|-++.|..+ ...+.|-+|....++..+. +..|.-+...|+||++.|+-.-.+++.--
T Consensus 1307 gYtPfCdsR-~EMDGyRFWK~GYW~~hL~-grkYHISALYVVDLkrFReiaAGDrLR~q 1363 (1470)
T KOG1879|consen 1307 GYTPFCDSR-REMDGYRFWKQGYWKKHLR-GRKYHISALYVVDLKRFREIAAGDRLRGQ 1363 (1470)
T ss_pred ccCcccccc-ccccchhHHhhhHHHHHhc-cCccccceeeeeeHHHHHhcccchHHHHH
Confidence 999999754 4567888898888876665 47899999999999999999998888853
No 23
>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=95.67 E-value=0.0051 Score=64.75 Aligned_cols=93 Identities=20% Similarity=0.265 Sum_probs=56.0
Q ss_pred hhhhhhhhhcccCCCCeEEEEecceeeecCchHHhccCCCCCeeEEeecccc---cccc---------------------
Q 008157 450 LNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGE---TFHR--------------------- 505 (576)
Q Consensus 450 ~~y~Rf~LPeLlP~ldKVLYLD~DvIV~~DLseLw~iDL~gkviAAVedc~~---~f~r--------------------- 505 (576)
.++.++-+-+.- ++|||+|||+|.||.+++.+||+.. -+-.+|-.|... .|||
T Consensus 155 ~mftKLrVfeqt-EyDRvifLDsDaivlknmDklFd~P--vyef~a~pD~~~sp~~fhrp~~~i~~~ft~~faayg~~r~ 231 (368)
T COG5597 155 DMFTKLRVFEQT-EYDRVIFLDSDAIVLKNMDKLFDYP--VYEFAAAPDVYESPADFHRPNSGIFVSFTPAFAAYGKMRA 231 (368)
T ss_pred HHhHHHHhhhhh-hhceEEEeccchHHhhhhHHHhcch--hhhhccCCchhhCHHHhcCCCCccceeecHHHHhhcccHh
Confidence 344555554544 5899999999999999999999865 222333333211 1222
Q ss_pred --cccccccC--ChhhhcCCCC-CCCceeechhhccHHHHHhhCH
Q 008157 506 --FDRYLNFS--NPLISKNFDP-RACGWAYGMNIFDLDEWRRQNI 545 (576)
Q Consensus 506 --y~~yLn~S--nP~i~~~f~~-~~cYFNSGVmLiDL~kWRk~ni 545 (576)
|..|++|. .+.+...+.| -.-+||+|.|+++..+.--..+
T Consensus 232 ~ly~Pylf~a~~dq~~~hstpP~fk~~FnagLmv~~Psk~hm~ri 276 (368)
T COG5597 232 ALYAPYLFWARTDQTFLHSTPPDFKLKFNAGLMVGLPSKMHMLRI 276 (368)
T ss_pred hhccccccccccCCcccccCCCcHhhhhccCceeecchHHHHHHH
Confidence 22455542 2222222223 4679999999999877654433
No 24
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=68.48 E-value=5.3 Score=38.90 Aligned_cols=51 Identities=22% Similarity=0.077 Sum_probs=32.5
Q ss_pred hhhhhhhhh-hhcccCCCCeEEEEecceeeecCchHHhccCCCCCeeEEeeccc
Q 008157 448 SILNHLRFY-LPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCG 500 (576)
Q Consensus 448 S~~~y~Rf~-LPeLlP~ldKVLYLD~DvIV~~DLseLw~iDL~gkviAAVedc~ 500 (576)
..+...|.- +-+++..=--|+|+|+|++..+|..+++ +-.+.-+.+..|+.
T Consensus 49 ~~~~~~K~~~~~~~L~~G~~vl~~D~Dvv~~~dp~~~~--~~~~~Di~~~~d~~ 100 (212)
T PF03407_consen 49 QKLTWLKPKVLLDLLELGYDVLFSDADVVWLRDPLPYF--ENPDADILFSSDGW 100 (212)
T ss_pred HHHHHHHHHHHHHHHHcCCceEEecCCEEEecCcHHhh--ccCCCceEEecCCC
Confidence 334444443 3445544346999999999999999999 22444444444664
No 25
>COG4575 ElaB Uncharacterized conserved protein [Function unknown]
Probab=68.36 E-value=17 Score=33.23 Aligned_cols=75 Identities=19% Similarity=0.228 Sum_probs=61.1
Q ss_pred hHHHHHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHhhccCCcCh-HHHHHHHHHHHHHHHHHHHHHHHhH
Q 008157 215 ANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDC-AAVVKKLRAMLHSTEEQLRVHKKQT 291 (576)
Q Consensus 215 ~~l~~el~~~i~e~~~~l~~a~~d~~l~~~~~~~~~~m~~~i~~ak~~~~d~-~~~~~klr~~l~~~ee~~~~~~~q~ 291 (576)
.++.-||+.-+.++|.+|..+...+ -.++.+.=...+.+|.+++...-+. ..++.+-|+++..+|+-|+.+-=|+
T Consensus 11 ~~l~~el~~L~d~lEevL~ssg~~a--~~e~~~lR~r~~~~Lk~~r~rl~~~~d~v~~~sk~a~~~tD~yV~e~PWq~ 86 (104)
T COG4575 11 DQLLAELQELLDTLEEVLKSSGSLA--GDEAEELRSKAESALKEARDRLGDTGDAVVQRSKAAADATDDYVRENPWQG 86 (104)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccch--hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHcCCchH
Confidence 6888999999999999999877665 2355555557888888888777676 7899999999999999998776554
No 26
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=60.85 E-value=5.4 Score=41.24 Aligned_cols=36 Identities=28% Similarity=0.397 Sum_probs=29.5
Q ss_pred hhhhhhhcccCCCCeEEEEecceeeecCchHHhccC
Q 008157 452 HLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSID 487 (576)
Q Consensus 452 y~Rf~LPeLlP~ldKVLYLD~DvIV~~DLseLw~iD 487 (576)
|..=.++-++...+.|||||+|.|...|.+.||+.+
T Consensus 79 ~~~K~lA~l~ssFeevllLDaD~vpl~~p~~lF~~~ 114 (271)
T PF11051_consen 79 FQNKWLALLFSSFEEVLLLDADNVPLVDPEKLFESE 114 (271)
T ss_pred chhhhhhhhhCCcceEEEEcCCcccccCHHHHhcCc
Confidence 344445667777999999999999999999999854
No 27
>KOG1928 consensus Alpha-1,4-N-acetylglucosaminyltransferase [Carbohydrate transport and metabolism]
Probab=54.18 E-value=6.3 Score=43.28 Aligned_cols=33 Identities=33% Similarity=0.460 Sum_probs=24.7
Q ss_pred hhhhhhhhhhcccCCCCeEEEEecceeeecCchHHhc
Q 008157 449 ILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWS 485 (576)
Q Consensus 449 ~~~y~Rf~LPeLlP~ldKVLYLD~DvIV~~DLseLw~ 485 (576)
..+..|+.+=.=+-. ||||.|+||.+++++|=+
T Consensus 227 lSdl~RLA~LyKYGG----vYLDTDvIvLksl~~l~N 259 (409)
T KOG1928|consen 227 LSDLSRLALLYKYGG----VYLDTDVIVLKSLSNLRN 259 (409)
T ss_pred HHHHHHHHHHHHhCC----EEeeccEEEecccccccc
Confidence 345677766333322 899999999999999986
No 28
>PRK10132 hypothetical protein; Provisional
Probab=53.64 E-value=59 Score=29.75 Aligned_cols=76 Identities=9% Similarity=0.078 Sum_probs=59.0
Q ss_pred hHHHHHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHhhccCCcChHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 008157 215 ANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTL 292 (576)
Q Consensus 215 ~~l~~el~~~i~e~~~~l~~a~~d~~l~~~~~~~~~~m~~~i~~ak~~~~d~~~~~~klr~~l~~~ee~~~~~~~q~~ 292 (576)
++|..||+.=+.++|.+|.++..++ -.++.+.=...+..+..+++...|......+.|.....+++-++.+--++.
T Consensus 15 e~L~~Dl~~L~~~le~ll~~~~~~~--~~~~~~lR~r~~~~L~~ar~~l~~~~~~~~~~~~a~~~~~~~V~~~Pw~sv 90 (108)
T PRK10132 15 QDIQNDVNQLADSLESVLKSWGSDA--KGEAEAARRKAQALLKETRARMHGRTRVQQAARDAVGCADTFVRERPWCSV 90 (108)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhh--HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhCcHHHH
Confidence 6899999999999999997766554 224544445777888888877667777778889999999999988766654
No 29
>PF04488 Gly_transf_sug: Glycosyltransferase sugar-binding region containing DXD motif ; InterPro: IPR007577 This entry represents those sugar-binding regions of glycosyltransferases that contain a DXD motif. The DXD motif is a short conserved motif found in many families of glycosyltransferases, which add a range of different sugars to other sugars, phosphates and proteins. DXD-containing glycosyltransferases all use nucleoside diphosphate sugars as donors and require divalent cations, usually manganese. The DXD motif is expected to play a carbohydrate binding role in sugar-nucleoside diphosphate and manganese dependent glycosyltransferases [].
Probab=48.15 E-value=13 Score=32.51 Aligned_cols=35 Identities=23% Similarity=0.393 Sum_probs=28.5
Q ss_pred CcchhhhhhhhhhhcccCCCCeEEEEecceeeecCc-hHH
Q 008157 445 KYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDL-SGL 483 (576)
Q Consensus 445 ~y~S~~~y~Rf~LPeLlP~ldKVLYLD~DvIV~~DL-seL 483 (576)
.+.....++|+.+--..-. ||+|.|++|.+++ ..+
T Consensus 61 ~~~~~sD~~R~~~L~~~GG----iY~D~D~~~~rpl~~~~ 96 (103)
T PF04488_consen 61 NYAHKSDLLRYLVLYKYGG----IYLDLDVICLRPLDDPW 96 (103)
T ss_pred chHHHHHHHHHHHHHHcCc----EEEeCccccCcchhhhh
Confidence 4556788999998776655 9999999999999 554
No 30
>PF10819 DUF2564: Protein of unknown function (DUF2564) ; InterPro: IPR020314 This entry contains proteins with no known function.
Probab=45.16 E-value=55 Score=28.55 Aligned_cols=69 Identities=22% Similarity=0.337 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHhhccCC--CCCCCChhHHHHHHHHHHHHHhhccCC--cChHHHHHHHHHHHHHHHHHHHHHH
Q 008157 219 RELRLRIKEVQRALGDAT--KDSDLPRIANDRLKAMEQSLAKGKQIQ--DDCAAVVKKLRAMLHSTEEQLRVHK 288 (576)
Q Consensus 219 ~el~~~i~e~~~~l~~a~--~d~~l~~~~~~~~~~m~~~i~~ak~~~--~d~~~~~~klr~~l~~~ee~~~~~~ 288 (576)
+++.-.|+-.|+++|-|+ .|.++-..|...++....-+.+|++.. .|- .|...=...|+..|-|++.++
T Consensus 6 kQve~aVetAqkmvG~AT~smdp~~Le~A~qAve~Ar~ql~~a~~~at~lD~-~Fl~~~~~~L~~~eHQL~Eak 78 (79)
T PF10819_consen 6 KQVEMAVETAQKMVGQATMSMDPDQLEHATQAVEDAREQLSQAKSHATGLDE-PFLQQSEQLLDDCEHQLDEAK 78 (79)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcH-HHHHHHHHHHHHHHHHHHHhc
Confidence 677788999999999999 566566678888888877777777544 343 677777888888888887665
No 31
>PRK10807 paraquat-inducible protein B; Provisional
Probab=34.81 E-value=1.2e+02 Score=34.99 Aligned_cols=46 Identities=17% Similarity=0.247 Sum_probs=24.0
Q ss_pred CCChhHHHHHHHHHHHHHhhccCCcChHHHHHHHHHHHHHHHHHHHHHHH
Q 008157 240 DLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQLRVHKK 289 (576)
Q Consensus 240 ~l~~~~~~~~~~m~~~i~~ak~~~~d~~~~~~klr~~l~~~ee~~~~~~~ 289 (576)
.||.++.+-++.++.++..+.. -...-..|++++..+++-++..+.
T Consensus 473 ~Lp~~L~~TL~~l~~~l~~~~~----~s~~~~~l~~tl~~l~~~~r~lr~ 518 (547)
T PRK10807 473 QLPADMQKTLRELNRSMQGFQP----GSPAYNKMVADMQRLDQVLRELQP 518 (547)
T ss_pred HHHHHHHHHHHHHHHHHhhcCC----CChHHHHHHHHHHHHHHHHHHHHH
Confidence 3556666666666666665432 122334455555555555544443
No 32
>TIGR02977 phageshock_pspA phage shock protein A. Members of this family are the phage shock protein PspA, from the phage shock operon. This is a narrower family than the set of PspA and its homologs, sometimes several in a genome, as described by PFAM model pfam04012. PspA appears to maintain the protonmotive force under stress conditions that include overexpression of certain phage secretins, heat shock, ethanol, and protein export defects.
Probab=34.40 E-value=63 Score=32.48 Aligned_cols=106 Identities=13% Similarity=0.161 Sum_probs=71.5
Q ss_pred CCCchhHHHhhhhHHHHHHhhc--cccccCCchHHHHHHHHHHHHHHH----hhccCCCCCCCChhHHHHHHHHHHHHHh
Q 008157 185 TTPPDFRVRQLKDQLIKAKVYL--SLPAMRNNANFVRELRLRIKEVQR----ALGDATKDSDLPRIANDRLKAMEQSLAK 258 (576)
Q Consensus 185 ~~~~d~~~~~l~dql~~a~~Y~--~~a~~~~~~~l~~el~~~i~e~~~----~l~~a~~d~~l~~~~~~~~~~m~~~i~~ 258 (576)
..|-+-.++.|+|+|.-||.=+ .+|..+.-.+=..++...+.+.+. +|. ..+.+|-..+.......+..+..
T Consensus 26 ~~~l~q~irem~~~l~~ar~~lA~~~a~~k~~e~~~~~~~~~~~~~~~~A~~Al~--~G~EdLAr~Al~~k~~~~~~~~~ 103 (219)
T TIGR02977 26 EKMIRLIIQEMEDTLVEVRTTSARTIADKKELERRVSRLEAQVADWQEKAELALS--KGREDLARAALIEKQKAQELAEA 103 (219)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHHHHHHHHH
Confidence 3578899999999998887743 344333333333455555555553 333 24556777787777777777777
Q ss_pred hccCCcChHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 008157 259 GKQIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTL 292 (576)
Q Consensus 259 ak~~~~d~~~~~~klr~~l~~~ee~~~~~~~q~~ 292 (576)
.+...-.....+.+|+.-+..++.++...+.+..
T Consensus 104 l~~~~~~~~~~v~~l~~~l~~L~~ki~~~k~k~~ 137 (219)
T TIGR02977 104 LERELAAVEETLAKLQEDIAKLQAKLAEARARQK 137 (219)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7766667778888999999999988877765543
No 33
>PRK10404 hypothetical protein; Provisional
Probab=28.06 E-value=2.3e+02 Score=25.64 Aligned_cols=80 Identities=9% Similarity=0.081 Sum_probs=54.8
Q ss_pred cCCchHHHHHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHhhccCCcChHH-HHHHHHHHHHHHHHHHHHHHH
Q 008157 211 MRNNANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDCAA-VVKKLRAMLHSTEEQLRVHKK 289 (576)
Q Consensus 211 ~~~~~~l~~el~~~i~e~~~~l~~a~~d~~l~~~~~~~~~~m~~~i~~ak~~~~d~~~-~~~klr~~l~~~ee~~~~~~~ 289 (576)
..+.+++..||+.-+.++|.++..+..++ -..+.+.=...+..+..++...-|... +..+.|++...+++-++.+--
T Consensus 4 ~~~~~~l~~dl~~L~~dle~Ll~~~~~~a--~e~~~~lR~r~~~~L~~ar~~l~~~~~~~~~~~k~aa~~td~yV~e~Pw 81 (101)
T PRK10404 4 QFGDTRIDDDLTLLSETLEEVLRSSGDPA--DQKYVELKARAEKALDDVKKRVSQASDSYYYRAKQAVYRADDYVHEKPW 81 (101)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHhhhhh--HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhCcH
Confidence 34567899999999999999998777553 123333334566667677644334443 345679999999999988766
Q ss_pred hHH
Q 008157 290 QTL 292 (576)
Q Consensus 290 q~~ 292 (576)
|+.
T Consensus 82 ~av 84 (101)
T PRK10404 82 QGI 84 (101)
T ss_pred HHH
Confidence 543
No 34
>PF06103 DUF948: Bacterial protein of unknown function (DUF948); InterPro: IPR009293 This family consists of bacterial sequences several of which are thought to be general stress proteins.
Probab=26.02 E-value=1.4e+02 Score=25.64 Aligned_cols=61 Identities=13% Similarity=0.300 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHhhccCCcChHHHHHHHHHHHHHHHHHH
Q 008157 218 VRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDCAAVVKKLRAMLHSTEEQL 284 (576)
Q Consensus 218 ~~el~~~i~e~~~~l~~a~~d~~l~~~~~~~~~~m~~~i~~ak~~~~d~~~~~~klr~~l~~~ee~~ 284 (576)
.+.+++-+++.++.+.. +..++.+..++++.++.++.+..-|+.....++..+..+.++--
T Consensus 21 l~~l~~~l~~~~~ti~~------l~~~~~~i~~e~~~ll~~~n~l~~dv~~k~~~v~~~~~~v~~~g 81 (90)
T PF06103_consen 21 LKKLKKTLDEVNKTIDT------LQEQVDPITKEINDLLHNTNELLEDVNEKLEKVDPVFEAVADLG 81 (90)
T ss_pred HHHHHHHHHHHHHHHHH------HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 35556666666655552 23456777888888998888888888888888888888776644
No 35
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=25.64 E-value=91 Score=35.09 Aligned_cols=116 Identities=17% Similarity=0.251 Sum_probs=60.7
Q ss_pred EEEEEeccccccccchhhhhcccCCCCceEEEEEeCCCCHHHHHHHHhhCCCCCceeEEeehhhhhhcccccchhhhhhc
Q 008157 340 HYALFSDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAAMRMWFLANPPGRATVQVQNIEEFTWLNSSYSPVLKQLN 419 (576)
Q Consensus 340 HIa~~sDNvlaasVvInSiv~N~~~Pe~ivFHIVTD~~s~~amk~WF~~n~~~~a~IeV~nie~F~wL~~~y~PvLkql~ 419 (576)
-++++|+..-++.-++.|++++.+..+.+.+.|--|+.+...... . ..+.. .+ ..+++ .
T Consensus 97 VlV~AcNRp~yl~r~L~sLl~~rp~~~~fpIiVSQDg~~~~~~~v-i--~~y~~-~v--~~i~~--------------~- 155 (434)
T PF03071_consen 97 VLVFACNRPDYLRRTLDSLLKYRPSAEKFPIIVSQDGDDEEVAEV-I--KSYGD-QV--TYIQH--------------P- 155 (434)
T ss_dssp EEEEESS-TT-HHHHHHHHHHH-S-TTTS-EEEEE-TT-HHHHHH-H--HGGGG-GS--EEEE---------------S-
T ss_pred EEEEecCCcHHHHHHHHHHHHcCCCCCCccEEEEecCCcHHHHHH-H--HHhhh-hh--eeeec--------------C-
Confidence 355666667788889999999876545555555557655433221 0 00100 00 01110 0
Q ss_pred cccceEEEecccccCCccccccCCCCcchhhhhhhhhhhcccCC--CCeEEEEecceeeecCchHHhcc
Q 008157 420 SQSMIDYYFRAHRANSDSNLKFRNPKYLSILNHLRFYLPEVFPR--LNKVLFLDDDVVVQKDLSGLWSI 486 (576)
Q Consensus 420 ~~~~~~y~F~~~~~~s~~~~k~r~p~y~S~~~y~Rf~LPeLlP~--ldKVLYLD~DvIV~~DLseLw~i 486 (576)
.+..-..... ..++ ..|...+.|++.-|-.+|.. +++||.|.+|+.|--|.=+-|+-
T Consensus 156 -------~~~~i~~~~~-~~~~--~~y~~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf~~ 214 (434)
T PF03071_consen 156 -------DFSPITIPPK-EKKF--KGYYKIARHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYFSA 214 (434)
T ss_dssp ---------S-----TT--GGG--HHHHHHHHHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHHHH
T ss_pred -------CcCCceeCcc-cccc--cchHHHHHHHHHHHHHHHHhcCCceEEEEecCcccCccHHHHHHH
Confidence 0000000000 0011 24677889999999999964 89999999999999998776653
No 36
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=24.68 E-value=3.4e+02 Score=22.70 Aligned_cols=35 Identities=11% Similarity=0.029 Sum_probs=23.5
Q ss_pred eccccccccchhhhhcccCCCCceEEEEEeCCCCHHH
Q 008157 345 SDNVLAAAVVVNSTVTHAKHPSNHVFHIVTDRLNYAA 381 (576)
Q Consensus 345 sDNvlaasVvInSiv~N~~~Pe~ivFHIVTD~~s~~a 381 (576)
.+....+.-++.|+...... ...++|++++.+...
T Consensus 6 ~~~~~~l~~~l~s~~~~~~~--~~~i~i~~~~~~~~~ 40 (156)
T cd00761 6 YNEEPYLERCLESLLAQTYP--NFEVIVVDDGSTDGT 40 (156)
T ss_pred cCcHHHHHHHHHHHHhCCcc--ceEEEEEeCCCCccH
Confidence 33444566788888887752 577888888765543
No 37
>PF04012 PspA_IM30: PspA/IM30 family; InterPro: IPR007157 This family includes PspA a protein that suppresses sigma54-dependent transcription. The PspA protein, a negative regulator of the Escherichia coli phage shock psp operon, is produced when virulence factors are exported through secretins in many Gram-negative pathogenic bacteria and its homologue in plants, VIPP1, plays a critical role in thylakoid biogenesis, essential for photosynthesis. Activation of transcription by the enhancer-dependent bacterial sigma54-containing RNA polymerase occurs through ATP hydrolysis-driven protein conformational changes enabled by activator proteins that belong to the large AAA(+) mechanochemical protein family. It has been shown that PspA directly and specifically acts upon and binds to the AAA(+) domain of the PspF transcription activator [].
Probab=24.18 E-value=1.2e+02 Score=30.03 Aligned_cols=107 Identities=22% Similarity=0.235 Sum_probs=69.8
Q ss_pred CCCchhHHHhhhhHHHHHHhhc--cccccCCchHHHHHHHHHHHHHHHhhccC--CCCCCCChhHHHHHHHHHHHHHhhc
Q 008157 185 TTPPDFRVRQLKDQLIKAKVYL--SLPAMRNNANFVRELRLRIKEVQRALGDA--TKDSDLPRIANDRLKAMEQSLAKGK 260 (576)
Q Consensus 185 ~~~~d~~~~~l~dql~~a~~Y~--~~a~~~~~~~l~~el~~~i~e~~~~l~~a--~~d~~l~~~~~~~~~~m~~~i~~ak 260 (576)
..+-|-.+|.|.++|.-|+.=+ .+|....-.+=..+....+.+.+.-...| ..+.+|=..+..+....+..+...+
T Consensus 25 ~~~l~q~ird~e~~l~~a~~~~a~~~a~~~~le~~~~~~~~~~~~~~~~A~~Al~~g~edLAr~al~~k~~~e~~~~~l~ 104 (221)
T PF04012_consen 25 EKMLEQAIRDMEEQLRKARQALARVMANQKRLERKLDEAEEEAEKWEKQAELALAAGREDLAREALQRKADLEEQAERLE 104 (221)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567888999999998887632 33322222222333444444444322222 3455677788888888888888888
Q ss_pred cCCcChHHHHHHHHHHHHHHHHHHHHHHHhH
Q 008157 261 QIQDDCAAVVKKLRAMLHSTEEQLRVHKKQT 291 (576)
Q Consensus 261 ~~~~d~~~~~~klr~~l~~~ee~~~~~~~q~ 291 (576)
...-....-+.+|+.-+..++.++...+.+-
T Consensus 105 ~~~~~~~~~~~~l~~~l~~l~~kl~e~k~k~ 135 (221)
T PF04012_consen 105 QQLDQAEAQVEKLKEQLEELEAKLEELKSKR 135 (221)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777788888899999988888887766543
No 38
>PRK15384 type III secretion system protein; Provisional
Probab=23.38 E-value=38 Score=35.55 Aligned_cols=24 Identities=25% Similarity=0.632 Sum_probs=20.9
Q ss_pred CCeEEEEecceeeecCchHHhccC
Q 008157 464 LNKVLFLDDDVVVQKDLSGLWSID 487 (576)
Q Consensus 464 ldKVLYLD~DvIV~~DLseLw~iD 487 (576)
-+-+||||+|+|+.+.|.-|+.-|
T Consensus 216 ~~GCIYLDaDMilT~KLG~ly~PD 239 (336)
T PRK15384 216 NSGCIYLDADMIITEKLGGIYIPD 239 (336)
T ss_pred CCceEEeeccceeecccccEEcCC
Confidence 367999999999999999998654
No 39
>PF05957 DUF883: Bacterial protein of unknown function (DUF883); InterPro: IPR010279 This family consists of several bacterial proteins of unknown function that include the Escherichia coli genes for ElaB, YgaM and YqjD.
Probab=23.33 E-value=2.2e+02 Score=24.66 Aligned_cols=76 Identities=16% Similarity=0.175 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHhhccCCcCh-HHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 008157 216 NFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGKQIQDDC-AAVVKKLRAMLHSTEEQLRVHKKQTLF 293 (576)
Q Consensus 216 ~l~~el~~~i~e~~~~l~~a~~d~~l~~~~~~~~~~m~~~i~~ak~~~~d~-~~~~~klr~~l~~~ee~~~~~~~q~~~ 293 (576)
.+..||.+-+.+++.++..+...+ ...+.+.-..++..+..+++..-|. ..+..+.+.....+|+.++.+--++.-
T Consensus 2 ~l~~~l~~l~~d~~~l~~~~~~~~--~~~~~~~r~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~V~e~P~~svg 78 (94)
T PF05957_consen 2 DLKAELEQLRADLEDLARSAADLA--GEKADEARDRAEEALDDARDRAEDAADQAREQAREAAEQTEDYVRENPWQSVG 78 (94)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHChHHHHH
Confidence 466777777777777776555332 2223333334444444444433232 246778899999999999888777643
No 40
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=23.27 E-value=52 Score=33.61 Aligned_cols=24 Identities=25% Similarity=0.375 Sum_probs=12.6
Q ss_pred cCCCCeEEEEecceeeecCchHHh
Q 008157 461 FPRLNKVLFLDDDVVVQKDLSGLW 484 (576)
Q Consensus 461 lP~ldKVLYLD~DvIV~~DLseLw 484 (576)
+|..+-|+|||+|.+|...=-+|-
T Consensus 74 ~P~~~wv~~lD~Dali~n~~~~L~ 97 (239)
T PF05637_consen 74 YPEAEWVWWLDSDALIMNPDFSLE 97 (239)
T ss_dssp -TT-SEEEEE-TTEEE--------
T ss_pred CCCCCEEEEEcCCeEEEecccccc
Confidence 488999999999999988655543
No 41
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=23.19 E-value=53 Score=33.68 Aligned_cols=24 Identities=33% Similarity=0.602 Sum_probs=21.1
Q ss_pred hhhcccCCCCeEEEEecceeeecC
Q 008157 456 YLPEVFPRLNKVLFLDDDVVVQKD 479 (576)
Q Consensus 456 ~LPeLlP~ldKVLYLD~DvIV~~D 479 (576)
.+..++|..+-|++||+|+-|...
T Consensus 34 vva~~L~~~~~vlflDaDigVvNp 57 (222)
T PF03314_consen 34 VVAKILPEYDWVLFLDADIGVVNP 57 (222)
T ss_pred HHHHHhccCCEEEEEcCCceeecC
Confidence 467788999999999999999875
No 42
>PRK15383 type III secretion system protein; Provisional
Probab=23.00 E-value=40 Score=35.37 Aligned_cols=66 Identities=21% Similarity=0.229 Sum_probs=41.9
Q ss_pred CCchHHHHHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHhhc---cCCcChHHHHHHHHHHHH
Q 008157 212 RNNANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGK---QIQDDCAAVVKKLRAMLH 278 (576)
Q Consensus 212 ~~~~~l~~el~~~i~e~~~~l~~a~~d~~l~~~~~~~~~~m~~~i~~ak---~~~~d~~~~~~klr~~l~ 278 (576)
+.+.-|-.=...-+-|-||++| .-.|.|+..+-.+...++|+--.-.| +..+|-+-..+||..+-.
T Consensus 71 k~~PYL~NiinaA~IE~eR~IG-v~VDGdFs~~Qk~af~kLE~~yeNIkiIYr~dvdfSMYDkKLsdIY~ 139 (335)
T PRK15383 71 QKNPYLNNIINAAIIEKERIIG-IFVDGDFSKGQRKALGKLEQNYRNIKVIYNSDLNYSMYDKKLTTIYL 139 (335)
T ss_pred CcCchHHHhhhHhhhccccEEE-EEEcCCcChhHHHHHHHHHHhhhcEEEEEeccCChhhhhhhHhHHHH
Confidence 3344455555666677888887 33677777766666666665444333 445677888888887654
No 43
>PRK15382 non-LEE encoded effector protein NleB; Provisional
Probab=22.91 E-value=40 Score=35.33 Aligned_cols=66 Identities=17% Similarity=0.199 Sum_probs=41.3
Q ss_pred CCchHHHHHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHhhc---cCCcChHHHHHHHHHHHH
Q 008157 212 RNNANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKGK---QIQDDCAAVVKKLRAMLH 278 (576)
Q Consensus 212 ~~~~~l~~el~~~i~e~~~~l~~a~~d~~l~~~~~~~~~~m~~~i~~ak---~~~~d~~~~~~klr~~l~ 278 (576)
+.+.-|-.=....+-|-||++| .-.|.|+..+-.+...++|+--.-.| +..+|-+-..+||..+-.
T Consensus 65 k~~PYL~NiinaA~IE~eR~IG-v~VDGdFs~~Qk~af~kLE~~~eNIkiIYr~dvdfSMYDkKLsdIY~ 133 (326)
T PRK15382 65 KEHPYLSNIINAAKIENERIIG-VLVDGDFTYEQKKEFLSLENEFQNIKIIYREDVDFSMYDKKLSDIYL 133 (326)
T ss_pred CcCchHHHhhhHhhhccccEEE-EEEcCCcChhHHHHHHHHHHhhhcEEEEEeccCChhhhhhhHhHHHH
Confidence 3344444455566677788877 33677777766666666665444433 445677888888887654
No 44
>COG1842 PspA Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms]
Probab=22.75 E-value=6.6e+02 Score=25.81 Aligned_cols=24 Identities=17% Similarity=0.205 Sum_probs=13.2
Q ss_pred ccccccCCchHHHHHHHHHHHHHH
Q 008157 206 LSLPAMRNNANFVRELRLRIKEVQ 229 (576)
Q Consensus 206 ~~~a~~~~~~~l~~el~~~i~e~~ 229 (576)
.-.|-..|++.|+++.-.+++.++
T Consensus 75 A~~Al~~g~E~LAr~al~~~~~le 98 (225)
T COG1842 75 AELALQAGNEDLAREALEEKQSLE 98 (225)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHH
Confidence 345555555555555555555554
No 45
>PRK10698 phage shock protein PspA; Provisional
Probab=22.55 E-value=1.6e+02 Score=29.96 Aligned_cols=106 Identities=12% Similarity=0.157 Sum_probs=66.7
Q ss_pred CCCchhHHHhhhhHHHHHHhhc--cccccCCchHHHHHHHHHHHHHHH--hhccCCCCCCCChhHHHHHHHHHHHHHhhc
Q 008157 185 TTPPDFRVRQLKDQLIKAKVYL--SLPAMRNNANFVRELRLRIKEVQR--ALGDATKDSDLPRIANDRLKAMEQSLAKGK 260 (576)
Q Consensus 185 ~~~~d~~~~~l~dql~~a~~Y~--~~a~~~~~~~l~~el~~~i~e~~~--~l~~a~~d~~l~~~~~~~~~~m~~~i~~ak 260 (576)
..|-+-+++.|+|++.=+|.=+ .+|....-.+=..++...+.+.++ .+.-...+.+|-+.++..-+.....+...+
T Consensus 26 ~k~l~q~i~em~~~l~~~r~alA~~~A~~k~~er~~~~~~~~~~~~e~kA~~Al~~G~EdLAr~AL~~K~~~~~~~~~l~ 105 (222)
T PRK10698 26 QKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQAEAQQVEWQEKAELALRKEKEDLARAALIEKQKLTDLIATLE 105 (222)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3478888999999988776632 333222222333344444444442 111123455577776666666777777777
Q ss_pred cCCcChHHHHHHHHHHHHHHHHHHHHHHHh
Q 008157 261 QIQDDCAAVVKKLRAMLHSTEEQLRVHKKQ 290 (576)
Q Consensus 261 ~~~~d~~~~~~klr~~l~~~ee~~~~~~~q 290 (576)
...-.....+.+|+.-+..++.++..++.+
T Consensus 106 ~~~~~~~~~~~~L~~~l~~L~~ki~eak~k 135 (222)
T PRK10698 106 HEVTLVDETLARMKKEIGELENKLSETRAR 135 (222)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 766677788889999999999888776543
No 46
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional
Probab=21.73 E-value=67 Score=35.93 Aligned_cols=92 Identities=17% Similarity=0.304 Sum_probs=51.2
Q ss_pred CCcchhhhhhhhhhhcccCCCCeEEEEecceeeecCchHHhccCCCCCeeEEeecccccccccccccccCChhhhcCCCC
Q 008157 444 PKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKDLSGLWSIDLKGKVNGAVETCGETFHRFDRYLNFSNPLISKNFDP 523 (576)
Q Consensus 444 p~y~S~~~y~Rf~LPeLlP~ldKVLYLD~DvIV~~DLseLw~iDL~gkviAAVedc~~~f~ry~~yLn~SnP~i~~~f~~ 523 (576)
+.+++..-+.|=.+- -+|..+-+.|||.|.||.+-- +.+.+..+ .+.....|.+...+ -..+
T Consensus 179 p~~WaKlpaLR~aM~-~~PeaEWiWWLDsDALImNms---felPlery-----~~~NlVihg~~~~l---------~~~k 240 (429)
T PLN03182 179 AGFWAKLPLLRKLML-AHPEVEWIWWMDSDALFTDMT---FEIPLEKY-----EGYNLVIHGWDELV---------YDQK 240 (429)
T ss_pred CcchhHHHHHHHHHH-HCCCceEEEEecCCceeecCC---CCCCHhHc-----CCcCeeeccchhhh---------eecc
Confidence 456776666666554 378999999999999998731 11222211 00000011111111 0123
Q ss_pred CCCceeechhhccHHHHHhhCHHHHHHHHHHHcc
Q 008157 524 RACGWAYGMNIFDLDEWRRQNITDVYHTWQKMVS 557 (576)
Q Consensus 524 ~~cYFNSGVmLiDL~kWRk~nit~k~~~w~kln~ 557 (576)
+-.+.|+||++|-.-.|--. -+..|.-+..
T Consensus 241 dW~GLNtGsFLIRNcqWSld----lLDaWa~mgp 270 (429)
T PLN03182 241 SWIGLNTGSFLIRNCQWSLD----LLDAWAPMGP 270 (429)
T ss_pred ccCccceeeEEEEcCHHHHH----HHHHHHhcCC
Confidence 45689999999988877653 2234555544
No 47
>PHA01346 hypothetical protein
Probab=20.82 E-value=3.3e+02 Score=21.50 Aligned_cols=44 Identities=30% Similarity=0.314 Sum_probs=31.4
Q ss_pred chHHHHHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHhh
Q 008157 214 NANFVRELRLRIKEVQRALGDATKDSDLPRIANDRLKAMEQSLAKG 259 (576)
Q Consensus 214 ~~~l~~el~~~i~e~~~~l~~a~~d~~l~~~~~~~~~~m~~~i~~a 259 (576)
|.-|++|||.-|-|+.|+--.|..|.|+..+ +.-.+++.++.+-
T Consensus 5 ntllmqelrllicelkrlrlsavsdpdfsqe--kihaeldsllrkl 48 (53)
T PHA01346 5 NTLLMQELRLLICELKRLRLSAVSDPDFSQE--KIHAELDSLLRKL 48 (53)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCccHH--HHHHHHHHHHHHH
Confidence 5568999999999999987778888766532 2333566666554
No 48
>PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function.
Probab=20.29 E-value=4.6e+02 Score=28.90 Aligned_cols=105 Identities=15% Similarity=0.191 Sum_probs=66.1
Q ss_pred HhhhhHHHHHHhhccccccCCchHHHHHHHH-----------HHHHHHHhhccCCCC-CCCChhHHHHHHHHHHHHHhhc
Q 008157 193 RQLKDQLIKAKVYLSLPAMRNNANFVRELRL-----------RIKEVQRALGDATKD-SDLPRIANDRLKAMEQSLAKGK 260 (576)
Q Consensus 193 ~~l~dql~~a~~Y~~~a~~~~~~~l~~el~~-----------~i~e~~~~l~~a~~d-~~l~~~~~~~~~~m~~~i~~ak 260 (576)
.+|+.||+.++- .++|.+|.-+=..++-. +++++.+-.+|-... ..|-.++.+.++--..+....+
T Consensus 109 qkL~nqL~~~~~--vf~k~k~~~q~LE~li~~~~EEn~~lqlqL~~l~~e~~Ekeeesq~LnrELaE~layqq~L~~eyQ 186 (401)
T PF06785_consen 109 QKLKNQLFHVRE--VFMKTKGDIQHLEGLIRHLREENQCLQLQLDALQQECGEKEEESQTLNRELAEALAYQQELNDEYQ 186 (401)
T ss_pred HHHHHHHHHHHH--HHHHhcchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 468899999988 67777776433333222 233333333333211 1233444555555555556666
Q ss_pred cCCcChHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhh
Q 008157 261 QIQDDCAAVVKKLRAMLHSTEEQLRVHKKQTLFLTQLTA 299 (576)
Q Consensus 261 ~~~~d~~~~~~klr~~l~~~ee~~~~~~~q~~~~~~laa 299 (576)
.-...-.++..|=.+-+-++|.+|+-.|-.=.=+-||+.
T Consensus 187 atf~eq~~ml~kRQ~yI~~LEsKVqDLm~EirnLLQle~ 225 (401)
T PF06785_consen 187 ATFVEQHSMLDKRQAYIGKLESKVQDLMYEIRNLLQLES 225 (401)
T ss_pred cccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 677788899999999999999999887776666666665
No 49
>PLN03181 glycosyltransferase; Provisional
Probab=20.04 E-value=81 Score=35.44 Aligned_cols=35 Identities=20% Similarity=0.305 Sum_probs=25.9
Q ss_pred CCcchhhhhhhhhhhcccCCCCeEEEEecceeeecC
Q 008157 444 PKYLSILNHLRFYLPEVFPRLNKVLFLDDDVVVQKD 479 (576)
Q Consensus 444 p~y~S~~~y~Rf~LPeLlP~ldKVLYLD~DvIV~~D 479 (576)
+..++..-..|=.+- -+|+.+-+.|||.|+||.+.
T Consensus 180 p~~WaKipalRaAM~-a~PeAEWfWWLDsDALIMNp 214 (453)
T PLN03181 180 NSYWAKLPVVRAAML-AHPEAEWIWWVDSDAVFTDM 214 (453)
T ss_pred chhhhHHHHHHHHHH-HCCCceEEEEecCCceeecC
Confidence 456666656664332 38999999999999999875
Done!