Query 008158
Match_columns 575
No_of_seqs 166 out of 1891
Neff 8.7
Searched_HMMs 46136
Date Thu Mar 28 20:12:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008158.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008158hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1237 H+/oligopeptide sympor 100.0 3E-47 6.5E-52 412.3 40.2 535 12-558 32-569 (571)
2 COG3104 PTR2 Dipeptide/tripept 100.0 6.6E-38 1.4E-42 323.4 30.9 459 12-553 16-491 (498)
3 PRK10207 dipeptide/tripeptide 100.0 8.5E-37 1.8E-41 330.6 40.1 465 12-555 9-482 (489)
4 TIGR00924 yjdL_sub1_fam amino 100.0 3.2E-35 6.9E-40 317.9 38.4 453 12-553 5-472 (475)
5 PRK15462 dipeptide/tripeptide 100.0 5.3E-35 1.2E-39 312.5 38.2 462 14-555 6-485 (493)
6 PRK09584 tppB putative tripept 100.0 5.4E-34 1.2E-38 310.1 39.2 458 14-555 18-485 (500)
7 TIGR00926 2A1704 Peptide:H+ sy 100.0 2.8E-26 6.1E-31 253.4 38.8 333 31-430 1-340 (654)
8 PRK05122 major facilitator sup 99.9 2.2E-24 4.7E-29 228.5 33.1 378 12-548 10-388 (399)
9 PRK03545 putative arabinose tr 99.9 8.6E-25 1.9E-29 231.1 28.6 371 16-549 8-380 (390)
10 PRK12382 putative transporter; 99.9 6.2E-24 1.3E-28 224.6 32.2 373 17-548 15-388 (392)
11 PRK11646 multidrug resistance 99.9 2.8E-24 6.1E-29 227.9 28.7 168 20-221 13-180 (400)
12 PRK11551 putative 3-hydroxyphe 99.9 1.2E-23 2.7E-28 223.2 30.7 175 12-220 10-184 (406)
13 PRK10489 enterobactin exporter 99.9 8.8E-24 1.9E-28 225.4 28.5 392 21-563 21-413 (417)
14 PRK14995 methyl viologen resis 99.9 1.3E-23 2.7E-28 229.2 30.3 176 16-225 5-181 (495)
15 COG2814 AraJ Arabinose efflux 99.9 4E-23 8.7E-28 211.9 31.7 381 8-551 4-388 (394)
16 PRK11663 regulatory protein Uh 99.9 2.2E-23 4.8E-28 223.5 30.1 166 19-218 25-190 (434)
17 PRK10054 putative transporter; 99.9 2.3E-23 4.9E-28 220.7 29.5 175 14-222 4-178 (395)
18 TIGR01299 synapt_SV2 synaptic 99.9 3.9E-23 8.4E-28 231.2 31.9 179 12-224 162-353 (742)
19 PRK10504 putative transporter; 99.9 6E-23 1.3E-27 222.5 32.5 177 17-227 10-186 (471)
20 TIGR00903 2A0129 major facilit 99.9 2.6E-23 5.6E-28 217.7 28.4 156 35-224 8-163 (368)
21 TIGR00893 2A0114 d-galactonate 99.9 1.7E-23 3.7E-28 219.3 26.6 156 36-224 12-167 (399)
22 PRK10077 xylE D-xylose transpo 99.9 2.5E-23 5.5E-28 225.7 28.0 191 12-224 7-213 (479)
23 PRK09874 drug efflux system pr 99.9 4.2E-23 9.1E-28 219.0 28.7 388 10-550 6-399 (408)
24 PRK09556 uhpT sugar phosphate 99.9 1E-23 2.3E-28 228.3 23.9 159 37-223 48-209 (467)
25 TIGR02332 HpaX 4-hydroxyphenyl 99.9 6.5E-23 1.4E-27 218.4 28.1 177 13-223 4-186 (412)
26 PRK09705 cynX putative cyanate 99.9 1.3E-22 2.7E-27 214.9 30.0 149 37-219 28-177 (393)
27 TIGR00892 2A0113 monocarboxyla 99.9 4.7E-23 1E-27 222.2 25.9 154 38-225 39-193 (455)
28 PRK10213 nepI ribonucleoside t 99.9 2.5E-22 5.5E-27 212.6 30.7 174 12-219 15-188 (394)
29 TIGR00891 2A0112 putative sial 99.9 1E-22 2.2E-27 215.2 27.5 176 11-220 6-183 (405)
30 TIGR00890 2A0111 Oxalate/Forma 99.9 4.8E-23 1E-27 215.0 24.5 153 37-223 22-174 (377)
31 PRK11273 glpT sn-glycerol-3-ph 99.9 1.4E-22 3.1E-27 218.5 27.5 154 38-221 49-203 (452)
32 PRK12307 putative sialic acid 99.9 1E-22 2.2E-27 217.6 25.4 167 13-213 14-180 (426)
33 PRK10642 proline/glycine betai 99.9 1.1E-21 2.5E-26 213.6 33.8 176 16-217 15-204 (490)
34 TIGR00887 2A0109 phosphate:H+ 99.9 5.6E-22 1.2E-26 216.7 31.4 189 7-223 6-222 (502)
35 TIGR00879 SP MFS transporter, 99.9 1.8E-22 3.9E-27 217.4 27.2 156 39-224 49-215 (481)
36 PRK15402 multidrug efflux syst 99.9 5.4E-22 1.2E-26 210.8 29.8 176 15-223 8-185 (406)
37 TIGR00900 2A0121 H+ Antiporter 99.9 3.8E-22 8.2E-27 207.5 28.0 357 22-508 4-363 (365)
38 PLN00028 nitrate transmembrane 99.9 1.8E-22 3.8E-27 219.0 26.3 175 15-224 34-217 (476)
39 TIGR00711 efflux_EmrB drug res 99.9 1.8E-22 3.9E-27 219.3 26.1 389 21-507 6-409 (485)
40 PRK10406 alpha-ketoglutarate t 99.9 6.5E-22 1.4E-26 212.1 29.6 169 24-218 29-211 (432)
41 PRK03699 putative transporter; 99.9 1.8E-21 3.9E-26 206.1 32.4 176 13-222 3-179 (394)
42 PF07690 MFS_1: Major Facilita 99.9 1.2E-22 2.7E-27 210.2 22.9 166 24-222 3-168 (352)
43 TIGR00899 2A0120 sugar efflux 99.9 6E-22 1.3E-26 207.5 28.3 168 24-224 4-174 (375)
44 KOG1330 Sugar transporter/spin 99.9 3.4E-23 7.4E-28 211.5 17.3 182 12-227 28-210 (493)
45 TIGR00710 efflux_Bcr_CflA drug 99.9 1.6E-21 3.4E-26 204.9 30.1 175 16-224 4-178 (385)
46 TIGR00894 2A0114euk Na(+)-depe 99.9 5.4E-22 1.2E-26 214.7 26.8 148 47-225 70-218 (465)
47 TIGR00897 2A0118 polyol permea 99.9 3.7E-21 8.1E-26 204.2 32.4 172 13-214 9-181 (402)
48 PRK03893 putative sialic acid 99.9 1.1E-21 2.4E-26 213.8 29.1 168 13-214 16-183 (496)
49 TIGR00895 2A0115 benzoate tran 99.9 8.6E-22 1.9E-26 207.3 26.9 176 11-220 11-186 (398)
50 PRK10091 MFS transport protein 99.9 1.8E-21 4E-26 205.1 29.1 169 19-221 5-173 (382)
51 PRK09952 shikimate transporter 99.9 2.9E-21 6.4E-26 207.4 31.0 178 13-216 18-210 (438)
52 cd06174 MFS The Major Facilita 99.9 3.1E-21 6.7E-26 199.0 29.1 345 22-546 4-349 (352)
53 PRK15403 multidrug efflux syst 99.9 4.1E-21 8.9E-26 204.6 30.8 149 42-223 40-188 (413)
54 PRK03633 putative MFS family t 99.9 3E-21 6.6E-26 203.4 28.5 155 17-205 6-160 (381)
55 PRK11652 emrD multidrug resist 99.9 5.1E-21 1.1E-25 202.5 29.6 174 13-220 4-177 (394)
56 KOG2532 Permease of the major 99.9 3.8E-22 8.3E-27 212.8 20.2 379 46-550 66-448 (466)
57 TIGR00898 2A0119 cation transp 99.9 8.2E-21 1.8E-25 207.6 29.3 149 41-225 112-263 (505)
58 PRK11195 lysophospholipid tran 99.9 1.9E-20 4.2E-25 198.2 31.1 165 18-220 4-168 (393)
59 TIGR00881 2A0104 phosphoglycer 99.9 1E-21 2.2E-26 205.2 20.2 154 37-223 14-168 (379)
60 COG2271 UhpC Sugar phosphate p 99.9 1.8E-21 4E-26 197.2 20.8 177 17-226 25-206 (448)
61 PRK11043 putative transporter; 99.9 2.4E-20 5.3E-25 197.7 30.2 150 42-224 30-179 (401)
62 PRK09528 lacY galactoside perm 99.9 1.2E-20 2.5E-25 201.6 27.2 391 17-548 10-402 (420)
63 TIGR00712 glpT glycerol-3-phos 99.9 3.9E-21 8.5E-26 206.4 23.4 156 38-223 47-203 (438)
64 PRK15011 sugar efflux transpor 99.9 4.1E-20 9E-25 195.6 30.8 176 16-224 14-192 (393)
65 PRK15075 citrate-proton sympor 99.9 5.2E-20 1.1E-24 197.5 30.0 173 15-213 13-199 (434)
66 TIGR00902 2A0127 phenyl propri 99.9 1.8E-19 3.8E-24 190.1 32.4 361 19-544 6-374 (382)
67 PRK10473 multidrug efflux syst 99.9 7E-20 1.5E-24 193.6 29.1 151 39-222 24-174 (392)
68 PRK11102 bicyclomycin/multidru 99.9 4.1E-20 9E-25 194.0 27.0 151 39-222 12-162 (377)
69 PF00854 PTR2: POT family; In 99.9 1.6E-21 3.4E-26 204.9 14.6 363 84-489 1-367 (372)
70 PRK10133 L-fucose transporter; 99.9 2.2E-19 4.9E-24 192.6 31.4 135 34-198 42-176 (438)
71 PF05977 MFS_3: Transmembrane 99.9 5.6E-19 1.2E-23 191.6 32.3 386 13-546 6-391 (524)
72 PRK11010 ampG muropeptide tran 99.9 6E-19 1.3E-23 191.9 31.9 180 12-224 7-193 (491)
73 TIGR00882 2A0105 oligosacchari 99.8 3.9E-19 8.4E-24 188.3 28.5 386 19-545 4-391 (396)
74 PRK15034 nitrate/nitrite trans 99.8 4.4E-19 9.6E-24 188.2 27.5 179 17-225 34-231 (462)
75 PRK08633 2-acyl-glycerophospho 99.8 5.4E-19 1.2E-23 211.9 31.2 156 16-201 8-165 (1146)
76 TIGR00792 gph sugar (Glycoside 99.8 5.4E-19 1.2E-23 189.4 27.8 351 31-509 13-381 (437)
77 TIGR00889 2A0110 nucleoside tr 99.8 1.2E-18 2.7E-23 185.8 30.4 390 24-551 9-404 (418)
78 TIGR00886 2A0108 nitrite extru 99.8 1.9E-19 4.2E-24 188.0 22.1 158 20-210 4-171 (366)
79 PRK06814 acylglycerophosphoeth 99.8 6E-19 1.3E-23 211.3 28.2 149 43-223 41-192 (1140)
80 PRK11128 putative 3-phenylprop 99.8 2.7E-18 5.8E-23 181.1 29.1 156 26-219 13-172 (382)
81 COG2223 NarK Nitrate/nitrite t 99.8 1.3E-18 2.9E-23 176.8 24.9 388 11-551 8-403 (417)
82 KOG0569 Permease of the major 99.8 6.9E-19 1.5E-23 186.0 23.1 392 55-561 62-466 (485)
83 TIGR00883 2A0106 metabolite-pr 99.8 8.9E-19 1.9E-23 183.9 23.0 159 37-220 12-185 (394)
84 KOG0254 Predicted transporter 99.8 6.4E-18 1.4E-22 185.1 30.2 418 35-562 64-496 (513)
85 TIGR00885 fucP L-fucose:H+ sym 99.8 8.8E-18 1.9E-22 178.7 30.4 169 22-220 7-201 (410)
86 TIGR00896 CynX cyanate transpo 99.8 1.7E-18 3.7E-23 180.5 23.2 150 32-216 14-165 (355)
87 PRK11902 ampG muropeptide tran 99.8 3.4E-17 7.3E-22 173.9 30.8 165 24-221 6-177 (402)
88 TIGR00901 2A0125 AmpG-related 99.8 1.6E-17 3.4E-22 173.3 22.9 160 34-224 4-176 (356)
89 TIGR01301 GPH_sucrose GPH fami 99.8 7.9E-16 1.7E-20 164.5 31.1 426 31-552 18-474 (477)
90 KOG0252 Inorganic phosphate tr 99.7 9.3E-18 2E-22 171.2 13.8 407 50-563 81-511 (538)
91 TIGR00805 oat sodium-independe 99.7 3.5E-17 7.6E-22 182.6 19.6 205 14-225 29-280 (633)
92 KOG2615 Permease of the major 99.7 8.3E-17 1.8E-21 160.7 18.8 119 48-200 63-181 (451)
93 PF06609 TRI12: Fungal trichot 99.7 8.3E-16 1.8E-20 166.7 27.8 182 7-223 30-214 (599)
94 PRK09848 glucuronide transport 99.7 3.1E-15 6.7E-20 161.2 32.2 150 25-198 16-174 (448)
95 TIGR00806 rfc RFC reduced fola 99.7 9.6E-16 2.1E-20 160.2 25.8 176 14-226 23-203 (511)
96 COG0738 FucP Fucose permease [ 99.7 2E-15 4.3E-20 152.8 27.2 155 16-200 11-165 (422)
97 PRK09669 putative symporter Ya 99.7 1.3E-15 2.8E-20 164.0 27.8 172 28-224 20-202 (444)
98 PRK10429 melibiose:sodium symp 99.7 2.5E-15 5.4E-20 163.0 29.8 169 29-223 18-198 (473)
99 KOG3764 Vesicular amine transp 99.7 2.1E-16 4.5E-21 158.8 18.7 149 47-227 100-248 (464)
100 KOG0255 Synaptic vesicle trans 99.7 2.3E-15 4.9E-20 165.4 28.1 142 46-223 111-252 (521)
101 TIGR02718 sider_RhtX_FptX side 99.7 7.1E-15 1.5E-19 155.4 29.9 177 19-225 3-183 (390)
102 PF00083 Sugar_tr: Sugar (and 99.7 7.1E-21 1.5E-25 205.0 -17.9 140 53-222 46-188 (451)
103 TIGR00788 fbt folate/biopterin 99.7 1.4E-14 3E-19 156.7 30.5 372 19-509 28-414 (468)
104 PF03825 Nuc_H_symport: Nucleo 99.7 3.5E-14 7.7E-19 149.8 31.9 385 22-551 7-397 (400)
105 KOG2533 Permease of the major 99.7 3.8E-15 8.1E-20 159.7 24.4 151 44-227 72-228 (495)
106 PF13347 MFS_2: MFS/sugar tran 99.7 6.9E-15 1.5E-19 157.6 24.0 354 30-510 14-386 (428)
107 KOG2504 Monocarboxylate transp 99.7 1.4E-14 3E-19 156.7 24.0 414 24-549 49-476 (509)
108 PTZ00207 hypothetical protein; 99.7 2.1E-13 4.6E-18 148.9 33.3 153 38-221 47-200 (591)
109 COG2807 CynX Cyanate permease 99.6 1.8E-13 4E-18 136.7 27.8 345 16-509 11-360 (395)
110 PF01306 LacY_symp: LacY proto 99.6 7.8E-14 1.7E-18 145.1 24.3 385 20-551 10-402 (412)
111 PRK11462 putative transporter; 99.6 2.9E-13 6.2E-18 146.3 29.1 171 28-223 20-201 (460)
112 KOG0253 Synaptic vesicle trans 99.6 1.8E-13 3.9E-18 136.0 21.9 163 26-223 86-248 (528)
113 COG2211 MelB Na+/melibiose sym 99.6 4.3E-12 9.3E-17 133.5 30.4 369 14-509 9-397 (467)
114 PRK15011 sugar efflux transpor 99.4 6.3E-12 1.4E-16 133.1 17.9 175 17-225 216-390 (393)
115 KOG4686 Predicted sugar transp 99.4 6.2E-13 1.3E-17 127.8 7.6 377 35-549 61-443 (459)
116 PRK09556 uhpT sugar phosphate 99.4 6.4E-12 1.4E-16 136.2 15.2 175 19-224 260-447 (467)
117 PRK10642 proline/glycine betai 99.4 1.7E-11 3.6E-16 133.8 18.4 176 20-225 253-429 (490)
118 cd06174 MFS The Major Facilita 99.4 1.8E-11 3.9E-16 126.0 17.3 172 19-223 177-349 (352)
119 PF03209 PUCC: PUCC protein; 99.3 2.3E-09 5.1E-14 110.1 31.0 375 45-545 7-394 (403)
120 PF11700 ATG22: Vacuole efflux 99.3 1.8E-09 3.8E-14 116.5 31.6 88 445-547 379-466 (477)
121 TIGR00899 2A0120 sugar efflux 99.3 2.1E-11 4.4E-16 127.7 16.4 167 24-224 206-372 (375)
122 TIGR00890 2A0111 Oxalate/Forma 99.3 1.4E-11 3E-16 128.4 15.0 163 25-219 213-375 (377)
123 PRK05122 major facilitator sup 99.3 2.3E-11 4.9E-16 128.9 16.2 164 29-228 228-391 (399)
124 COG2271 UhpC Sugar phosphate p 99.3 1.6E-11 3.4E-16 125.4 13.8 179 17-225 252-433 (448)
125 PRK03699 putative transporter; 99.3 3.1E-11 6.7E-16 127.8 16.2 170 19-222 207-376 (394)
126 TIGR00880 2_A_01_02 Multidrug 99.3 6.8E-12 1.5E-16 111.1 8.3 133 59-224 4-136 (141)
127 KOG2325 Predicted transporter/ 99.3 3.1E-11 6.8E-16 127.3 14.5 159 10-197 27-187 (488)
128 TIGR01299 synapt_SV2 synaptic 99.3 3.7E-11 7.9E-16 135.3 15.5 133 58-224 600-732 (742)
129 KOG2563 Permease of the major 99.3 2.6E-10 5.6E-15 117.3 19.7 163 38-228 65-237 (480)
130 TIGR00889 2A0110 nucleoside tr 99.3 4.3E-11 9.2E-16 127.8 14.8 176 21-226 212-402 (418)
131 PRK03545 putative arabinose tr 99.3 1.6E-10 3.5E-15 122.1 18.6 170 24-227 212-381 (390)
132 PRK09952 shikimate transporter 99.3 1.2E-10 2.7E-15 125.1 17.7 174 23-225 256-432 (438)
133 PRK09874 drug efflux system pr 99.3 1E-10 2.2E-15 124.0 16.3 162 30-224 232-396 (408)
134 PRK03893 putative sialic acid 99.3 1.6E-10 3.5E-15 126.0 18.1 148 35-213 293-440 (496)
135 PRK11551 putative 3-hydroxyphe 99.3 1.1E-10 2.4E-15 123.9 16.3 166 25-224 228-394 (406)
136 TIGR00883 2A0106 metabolite-pr 99.2 6.6E-11 1.4E-15 124.1 13.9 166 19-215 221-390 (394)
137 PRK09705 cynX putative cyanate 99.2 2E-10 4.4E-15 121.6 17.5 175 19-227 207-382 (393)
138 PF03137 OATP: Organic Anion T 99.2 9.5E-13 2.1E-17 143.6 -0.7 189 31-230 16-254 (539)
139 PRK03633 putative MFS family t 99.2 2E-10 4.4E-15 121.0 17.0 158 29-223 212-369 (381)
140 TIGR00893 2A0114 d-galactonate 99.2 1.7E-10 3.6E-15 120.7 16.0 180 17-223 215-396 (399)
141 PF03092 BT1: BT1 family; Int 99.2 3E-09 6.4E-14 113.9 25.3 163 38-227 10-176 (433)
142 TIGR00891 2A0112 putative sial 99.2 1.4E-10 3E-15 122.4 15.0 152 27-210 248-400 (405)
143 PRK12382 putative transporter; 99.2 1.2E-10 2.6E-15 123.1 14.3 158 31-224 230-387 (392)
144 PRK09528 lacY galactoside perm 99.2 8.5E-11 1.9E-15 125.5 12.7 155 36-223 242-400 (420)
145 PRK10489 enterobactin exporter 99.2 2E-10 4.2E-15 122.6 15.1 155 34-221 240-394 (417)
146 PRK11663 regulatory protein Uh 99.2 3E-10 6.4E-15 122.0 15.8 175 20-224 246-422 (434)
147 TIGR00892 2A0113 monocarboxyla 99.2 4.4E-10 9.5E-15 121.4 17.1 170 19-221 243-416 (455)
148 TIGR00902 2A0127 phenyl propri 99.2 6E-10 1.3E-14 117.5 17.2 170 17-222 205-375 (382)
149 PRK11273 glpT sn-glycerol-3-ph 99.2 2.7E-10 5.7E-15 123.0 14.8 174 19-223 255-432 (452)
150 TIGR00897 2A0118 polyol permea 99.2 7E-10 1.5E-14 117.8 17.7 174 20-224 225-399 (402)
151 COG2270 Permeases of the major 99.2 7.4E-10 1.6E-14 113.5 16.6 129 36-194 34-170 (438)
152 PF11700 ATG22: Vacuole efflux 99.2 5.3E-10 1.1E-14 120.5 16.1 185 16-225 280-467 (477)
153 TIGR01272 gluP glucose/galacto 99.2 9.2E-10 2E-14 112.6 17.1 84 132-221 9-108 (310)
154 COG2814 AraJ Arabinose efflux 99.2 1.3E-09 2.8E-14 112.7 17.9 179 16-228 210-388 (394)
155 TIGR00879 SP MFS transporter, 99.2 9.2E-10 2E-14 118.5 17.5 167 36-224 302-468 (481)
156 PRK15075 citrate-proton sympor 99.1 9.3E-10 2E-14 118.1 16.3 152 24-205 245-398 (434)
157 PRK11010 ampG muropeptide tran 99.1 1.4E-09 3.1E-14 118.6 17.6 172 27-227 232-404 (491)
158 KOG2816 Predicted transporter 99.1 4E-08 8.8E-13 105.0 27.4 362 16-509 17-393 (463)
159 PRK10406 alpha-ketoglutarate t 99.1 2E-09 4.3E-14 115.5 17.2 166 28-224 254-422 (432)
160 KOG3626 Organic anion transpor 99.1 1.4E-08 3.1E-13 111.6 23.4 206 17-229 96-346 (735)
161 PRK10077 xylE D-xylose transpo 99.1 6.3E-09 1.4E-13 112.9 19.4 155 41-224 294-455 (479)
162 COG2223 NarK Nitrate/nitrite t 99.1 1.8E-09 3.9E-14 110.7 13.7 186 16-228 217-403 (417)
163 TIGR00712 glpT glycerol-3-phos 99.0 2E-09 4.2E-14 115.8 13.7 176 21-227 255-434 (438)
164 PLN00028 nitrate transmembrane 99.0 4.1E-09 8.8E-14 114.6 16.2 163 29-226 264-433 (476)
165 TIGR00900 2A0121 H+ Antiporter 99.0 3E-09 6.5E-14 110.4 13.8 154 18-203 211-365 (365)
166 TIGR02332 HpaX 4-hydroxyphenyl 99.0 4.5E-09 9.9E-14 112.0 15.5 161 21-214 246-409 (412)
167 TIGR00792 gph sugar (Glycoside 99.0 5.4E-09 1.2E-13 112.0 16.1 160 19-205 224-384 (437)
168 PRK10091 MFS transport protein 99.0 5.6E-09 1.2E-13 110.1 15.5 165 24-222 206-372 (382)
169 PRK15402 multidrug efflux syst 99.0 1.8E-08 3.9E-13 107.0 19.4 162 28-218 226-387 (406)
170 PRK10504 putative transporter; 99.0 6.7E-09 1.5E-13 112.6 16.2 156 19-204 263-418 (471)
171 PRK11128 putative 3-phenylprop 99.0 9.8E-09 2.1E-13 108.3 16.9 164 19-218 207-371 (382)
172 TIGR01272 gluP glucose/galacto 99.0 4.9E-09 1.1E-13 107.3 14.2 146 34-215 157-304 (310)
173 TIGR02718 sider_RhtX_FptX side 99.0 1.1E-08 2.4E-13 108.1 16.6 174 19-220 210-385 (390)
174 PRK12307 putative sialic acid 99.0 9.4E-09 2E-13 109.8 16.2 145 34-210 248-392 (426)
175 KOG4686 Predicted sugar transp 99.0 9.1E-09 2E-13 99.5 13.9 167 13-214 260-430 (459)
176 TIGR00881 2A0104 phosphoglycer 99.0 5.1E-09 1.1E-13 109.1 13.2 160 19-208 218-379 (379)
177 TIGR00895 2A0115 benzoate tran 98.9 8E-09 1.7E-13 108.5 13.6 145 20-198 253-397 (398)
178 TIGR00882 2A0105 oligosacchari 98.9 1.4E-08 3.1E-13 107.5 14.9 154 35-221 233-390 (396)
179 TIGR00887 2A0109 phosphate:H+ 98.9 1.4E-08 3E-13 111.2 14.8 165 27-221 298-484 (502)
180 TIGR00894 2A0114euk Na(+)-depe 98.9 3.9E-08 8.4E-13 106.5 18.1 177 17-224 261-448 (465)
181 PRK10133 L-fucose transporter; 98.9 1.9E-08 4.2E-13 108.1 15.2 164 22-221 263-428 (438)
182 PF05977 MFS_3: Transmembrane 98.9 1.9E-08 4E-13 109.8 15.1 168 23-223 224-391 (524)
183 COG2270 Permeases of the major 98.9 1.1E-08 2.5E-13 104.9 12.4 172 18-222 253-425 (438)
184 PRK10213 nepI ribonucleoside t 98.9 6.2E-08 1.3E-12 102.7 18.4 165 19-218 218-383 (394)
185 TIGR00711 efflux_EmrB drug res 98.9 1E-08 2.2E-13 111.4 12.5 156 17-201 255-410 (485)
186 TIGR00896 CynX cyanate transpo 98.9 2E-08 4.4E-13 104.6 14.3 151 20-203 200-350 (355)
187 TIGR00710 efflux_Bcr_CflA drug 98.9 7.1E-08 1.5E-12 101.1 18.2 155 25-209 214-369 (385)
188 PRK10054 putative transporter; 98.9 1.7E-08 3.6E-13 107.1 13.3 172 18-222 207-380 (395)
189 PRK11902 ampG muropeptide tran 98.9 5.8E-08 1.3E-12 103.1 17.4 154 38-224 230-388 (402)
190 PRK14995 methyl viologen resis 98.9 2.7E-08 5.8E-13 108.8 14.7 152 19-200 261-412 (495)
191 PRK09848 glucuronide transport 98.9 4.5E-08 9.8E-13 105.5 15.7 163 17-204 228-391 (448)
192 PRK08633 2-acyl-glycerophospho 98.8 4.9E-08 1.1E-12 117.6 16.6 156 25-213 240-397 (1146)
193 PRK11646 multidrug resistance 98.8 6.9E-08 1.5E-12 102.5 15.3 152 36-220 227-382 (400)
194 PF13347 MFS_2: MFS/sugar tran 98.8 1.1E-07 2.4E-12 101.9 16.4 162 17-204 225-387 (428)
195 PRK06814 acylglycerophosphoeth 98.8 5E-08 1.1E-12 117.5 15.2 182 19-213 227-409 (1140)
196 PF05631 DUF791: Protein of un 98.8 1E-06 2.2E-11 89.5 22.0 152 44-224 60-214 (354)
197 PRK11195 lysophospholipid tran 98.8 1.8E-07 4E-12 99.1 17.6 159 31-223 219-377 (393)
198 TIGR00903 2A0129 major facilit 98.7 1.9E-07 4.2E-12 97.9 15.7 167 17-223 192-362 (368)
199 PRK15034 nitrate/nitrite trans 98.7 2.1E-07 4.5E-12 99.5 15.8 185 18-225 253-453 (462)
200 TIGR00901 2A0125 AmpG-related 98.7 1.1E-07 2.4E-12 99.1 12.7 143 19-185 211-355 (356)
201 KOG2504 Monocarboxylate transp 98.7 9.2E-08 2E-12 103.9 12.3 176 17-226 298-476 (509)
202 PRK10473 multidrug efflux syst 98.7 3.4E-07 7.3E-12 96.8 15.6 70 35-105 221-290 (392)
203 PRK11102 bicyclomycin/multidru 98.7 7.2E-07 1.6E-11 93.5 17.9 142 25-196 202-344 (377)
204 TIGR00898 2A0119 cation transp 98.7 1E-07 2.2E-12 104.3 11.8 133 59-224 361-493 (505)
205 KOG3762 Predicted transporter 98.7 9E-07 1.9E-11 93.2 17.5 118 406-554 434-552 (618)
206 KOG3098 Uncharacterized conser 98.7 1.9E-05 4.2E-10 83.6 27.6 103 59-195 56-158 (461)
207 PF07690 MFS_1: Major Facilita 98.6 2E-07 4.2E-12 96.3 11.1 141 22-192 211-352 (352)
208 PRK10429 melibiose:sodium symp 98.6 6.4E-07 1.4E-11 97.3 15.4 165 17-204 231-396 (473)
209 PRK11043 putative transporter; 98.6 2.7E-06 5.8E-11 90.2 18.5 145 31-205 217-361 (401)
210 COG2807 CynX Cyanate permease 98.6 1.9E-06 4.1E-11 87.0 15.7 163 20-215 211-374 (395)
211 PRK09669 putative symporter Ya 98.6 1.1E-06 2.4E-11 94.6 15.2 141 39-204 250-391 (444)
212 KOG2532 Permease of the major 98.5 1.6E-06 3.4E-11 93.2 14.7 174 19-224 260-445 (466)
213 COG2211 MelB Na+/melibiose sym 98.5 5.7E-06 1.2E-10 87.6 17.4 154 25-203 244-398 (467)
214 TIGR00880 2_A_01_02 Multidrug 98.5 4.1E-06 8.9E-11 73.6 14.0 131 376-548 7-137 (141)
215 TIGR00885 fucP L-fucose:H+ sym 98.4 3E-06 6.4E-11 90.4 14.4 162 21-218 236-404 (410)
216 PF03825 Nuc_H_symport: Nucleo 98.4 4.1E-06 8.8E-11 88.7 14.9 180 18-225 208-394 (400)
217 KOG0253 Synaptic vesicle trans 98.4 3.3E-06 7.1E-11 85.1 13.1 148 15-195 324-490 (528)
218 TIGR00886 2A0108 nitrite extru 98.4 1.8E-06 3.9E-11 89.9 12.0 137 21-187 229-365 (366)
219 KOG0569 Permease of the major 98.4 1.7E-05 3.8E-10 84.7 19.4 184 14-223 266-451 (485)
220 TIGR00924 yjdL_sub1_fam amino 98.4 2.3E-06 5E-11 93.0 12.6 186 18-226 273-468 (475)
221 PRK11652 emrD multidrug resist 98.3 2E-05 4.3E-10 83.3 17.5 138 37-205 227-364 (394)
222 COG0477 ProP Permeases of the 98.3 1.5E-05 3.3E-10 79.1 14.7 146 40-215 24-174 (338)
223 PF06813 Nodulin-like: Nodulin 98.2 3.1E-05 6.8E-10 76.0 15.2 160 37-224 21-180 (250)
224 PRK11462 putative transporter; 98.2 2.2E-05 4.7E-10 85.0 14.8 128 52-204 262-390 (460)
225 PF02487 CLN3: CLN3 protein; 98.2 0.00043 9.4E-09 72.3 23.4 62 445-506 334-395 (402)
226 KOG1330 Sugar transporter/spin 98.2 7.3E-07 1.6E-11 92.6 2.9 145 372-557 73-217 (493)
227 PRK15403 multidrug efflux syst 98.2 3.6E-05 7.7E-10 82.2 15.6 169 19-217 220-388 (413)
228 KOG3574 Acetyl-CoA transporter 98.2 0.00021 4.6E-09 72.5 19.3 158 12-196 26-190 (510)
229 PF01306 LacY_symp: LacY proto 98.2 1.3E-05 2.7E-10 84.1 11.1 157 35-224 238-398 (412)
230 KOG3764 Vesicular amine transp 98.1 5.4E-06 1.2E-10 84.5 6.5 162 36-224 289-452 (464)
231 KOG4332 Predicted sugar transp 98.0 0.00014 2.9E-09 70.5 14.6 90 41-158 60-149 (454)
232 KOG0637 Sucrose transporter an 98.0 9.8E-06 2.1E-10 84.1 7.0 167 17-198 32-202 (498)
233 PF03209 PUCC: PUCC protein; 98.0 0.00017 3.6E-09 74.7 15.8 155 39-222 230-394 (403)
234 PRK10207 dipeptide/tripeptide 98.0 3.6E-05 7.7E-10 83.9 11.5 149 26-198 278-438 (489)
235 PRK09584 tppB putative tripept 97.9 0.0001 2.2E-09 80.7 13.4 168 28-219 283-472 (500)
236 PF12832 MFS_1_like: MFS_1 lik 97.9 9.6E-05 2.1E-09 58.6 8.9 67 26-94 9-75 (77)
237 TIGR01301 GPH_sucrose GPH fami 97.9 0.00022 4.7E-09 77.0 14.4 201 15-228 256-473 (477)
238 TIGR00788 fbt folate/biopterin 97.8 2.8E-05 6.1E-10 84.3 6.9 136 45-203 280-415 (468)
239 PF01770 Folate_carrier: Reduc 97.8 0.0029 6.3E-08 66.3 21.0 156 37-226 23-182 (412)
240 TIGR00769 AAA ADP/ATP carrier 97.7 0.018 3.9E-07 62.0 25.9 170 15-199 5-189 (472)
241 KOG2533 Permease of the major 97.7 0.00014 3E-09 78.7 9.9 162 18-210 274-440 (495)
242 TIGR00806 rfc RFC reduced fola 97.7 0.0012 2.6E-08 70.2 16.2 90 393-505 84-173 (511)
243 COG0738 FucP Fucose permease [ 97.7 0.00049 1.1E-08 70.9 12.6 139 35-209 254-392 (422)
244 TIGR00805 oat sodium-independe 97.7 0.00018 3.9E-09 80.9 10.4 128 370-508 71-234 (633)
245 PRK15462 dipeptide/tripeptide 97.7 0.00035 7.5E-09 75.7 12.0 121 392-549 66-189 (493)
246 KOG3762 Predicted transporter 97.7 0.0001 2.2E-09 78.2 7.2 159 36-228 390-549 (618)
247 KOG0254 Predicted transporter 97.7 0.0017 3.6E-08 71.5 17.3 181 13-214 290-470 (513)
248 PTZ00207 hypothetical protein; 97.6 0.00091 2E-08 73.9 14.2 125 392-550 82-206 (591)
249 PF00083 Sugar_tr: Sugar (and 97.5 8.9E-07 1.9E-11 95.3 -11.4 174 23-222 258-432 (451)
250 KOG0252 Inorganic phosphate tr 97.4 0.00024 5.1E-09 74.1 6.2 128 69-224 364-496 (538)
251 PF06963 FPN1: Ferroportin1 (F 97.3 0.31 6.8E-06 51.9 30.9 188 19-221 4-195 (432)
252 PF06609 TRI12: Fungal trichot 97.3 0.002 4.3E-08 71.0 12.4 139 369-550 80-218 (599)
253 KOG2325 Predicted transporter/ 97.1 0.0074 1.6E-07 64.5 13.2 157 375-555 79-235 (488)
254 PF06779 DUF1228: Protein of u 97.1 0.0057 1.2E-07 49.1 9.4 68 37-105 11-78 (85)
255 PF05978 UNC-93: Ion channel r 97.1 0.011 2.3E-07 53.8 12.3 112 51-196 35-146 (156)
256 KOG2563 Permease of the major 97.0 0.0053 1.2E-07 64.2 10.6 183 19-231 268-455 (480)
257 KOG0255 Synaptic vesicle trans 97.0 0.003 6.6E-08 69.4 9.5 126 374-544 125-250 (521)
258 PRK03612 spermidine synthase; 96.6 0.067 1.5E-06 58.7 16.4 174 21-223 18-195 (521)
259 KOG2615 Permease of the major 96.5 0.015 3.3E-07 59.6 9.9 150 19-200 262-413 (451)
260 TIGR00926 2A1704 Peptide:H+ sy 96.4 0.18 4E-06 56.8 18.8 325 39-433 6-340 (654)
261 PF06813 Nodulin-like: Nodulin 96.3 0.074 1.6E-06 52.3 12.8 92 406-506 64-155 (250)
262 KOG3626 Organic anion transpor 96.2 0.044 9.6E-07 61.3 12.1 174 21-200 396-648 (735)
263 COG3104 PTR2 Dipeptide/tripept 96.0 0.0079 1.7E-07 63.9 5.0 120 406-554 90-211 (498)
264 PF00854 PTR2: POT family; In 96.0 0.039 8.5E-07 57.9 10.4 125 409-555 2-129 (372)
265 KOG2816 Predicted transporter 95.8 0.03 6.5E-07 60.3 8.6 126 39-198 263-389 (463)
266 PF03137 OATP: Organic Anion T 95.4 0.0041 9E-08 68.4 0.0 175 21-201 309-514 (539)
267 PF03092 BT1: BT1 family; Int 95.2 0.2 4.3E-06 53.8 12.3 118 406-551 57-177 (433)
268 PF13000 Acatn: Acetyl-coenzym 95.2 5.7 0.00012 42.8 24.3 66 449-514 408-473 (544)
269 KOG3880 Predicted small molecu 94.4 1.9 4.1E-05 43.4 15.2 60 444-503 340-399 (409)
270 KOG1479 Nucleoside transporter 92.4 16 0.00036 38.4 23.2 58 445-502 342-399 (406)
271 PF05978 UNC-93: Ion channel r 92.2 3.3 7.2E-05 37.6 12.4 62 445-506 88-149 (156)
272 KOG3098 Uncharacterized conser 91.8 2.2 4.9E-05 45.7 12.5 116 65-196 291-409 (461)
273 COG3202 ATP/ADP translocase [E 90.2 30 0.00066 37.3 25.0 168 17-200 27-209 (509)
274 PF07672 MFS_Mycoplasma: Mycop 89.1 5.1 0.00011 39.4 11.2 58 172-229 3-65 (267)
275 PF06963 FPN1: Ferroportin1 (F 88.7 15 0.00033 39.3 15.5 134 38-195 279-412 (432)
276 PF03219 TLC: TLC ATP/ADP tran 88.5 40 0.00086 36.8 18.8 140 52-200 57-205 (491)
277 KOG0637 Sucrose transporter an 87.1 1.4 3.1E-05 46.6 6.4 91 14-105 276-383 (498)
278 PF05631 DUF791: Protein of un 82.6 42 0.0009 34.8 14.5 63 445-507 120-188 (354)
279 PF02487 CLN3: CLN3 protein; 80.9 9.4 0.0002 40.3 9.4 61 132-198 334-394 (402)
280 TIGR00769 AAA ADP/ATP carrier 76.2 1.2E+02 0.0026 32.9 16.4 57 451-507 133-190 (472)
281 PF01770 Folate_carrier: Reduc 74.3 1.2E+02 0.0027 32.1 17.6 62 444-506 92-153 (412)
282 TIGR00939 2a57 Equilibrative N 73.3 1.4E+02 0.003 32.1 29.1 58 446-503 372-429 (437)
283 PF13000 Acatn: Acetyl-coenzym 73.1 38 0.00082 36.7 11.2 44 461-504 133-176 (544)
284 COG0477 ProP Permeases of the 71.3 43 0.00094 32.2 11.0 62 446-507 94-157 (338)
285 KOG4830 Predicted sugar transp 71.1 5.7 0.00012 39.0 4.3 75 11-88 12-95 (412)
286 KOG3810 Micronutrient transpor 69.4 66 0.0014 33.4 11.4 97 444-548 324-420 (433)
287 KOG4332 Predicted sugar transp 68.9 51 0.0011 32.9 10.2 140 54-219 283-424 (454)
288 PRK03612 spermidine synthase; 65.2 86 0.0019 34.5 12.6 53 454-507 118-170 (521)
289 COG5336 Uncharacterized protei 63.5 73 0.0016 26.7 8.5 37 474-510 34-70 (116)
290 TIGR00939 2a57 Equilibrative N 61.8 20 0.00044 38.4 6.8 56 133-194 372-427 (437)
291 COG5336 Uncharacterized protei 61.5 26 0.00056 29.3 5.6 37 64-100 53-89 (116)
292 PF07857 DUF1632: CEO family ( 48.2 1.6E+02 0.0034 29.1 9.9 26 477-502 74-99 (254)
293 KOG2601 Iron transporter [Inor 48.1 3.6E+02 0.0078 28.5 14.2 85 17-102 27-111 (503)
294 PF09527 ATPase_gene1: Putativ 47.7 81 0.0017 22.8 6.0 37 61-97 8-44 (55)
295 PF11947 DUF3464: Protein of u 47.0 60 0.0013 29.2 6.2 49 133-190 97-145 (153)
296 KOG1479 Nucleoside transporter 44.7 53 0.0012 34.7 6.3 130 36-192 262-396 (406)
297 KOG3097 Predicted membrane pro 44.4 2.9E+02 0.0063 28.6 11.1 71 65-163 70-140 (390)
298 PF06800 Sugar_transport: Suga 43.3 3.4E+02 0.0073 27.1 11.3 24 477-500 194-217 (269)
299 PF03219 TLC: TLC ATP/ADP tran 42.6 4.9E+02 0.011 28.5 20.3 49 459-507 157-205 (491)
300 KOG3574 Acetyl-CoA transporter 42.2 85 0.0018 33.1 7.1 47 453-499 140-186 (510)
301 PF06027 DUF914: Eukaryotic pr 40.5 2.1E+02 0.0045 29.5 9.8 21 410-430 200-220 (334)
302 PF12606 RELT: Tumour necrosis 33.0 97 0.0021 22.2 4.2 7 549-555 24-30 (50)
303 PF03606 DcuC: C4-dicarboxylat 30.7 3.5E+02 0.0076 29.3 10.2 24 533-556 203-226 (465)
304 TIGR02230 ATPase_gene1 F0F1-AT 27.9 2.2E+02 0.0047 23.8 6.0 33 63-95 52-84 (100)
305 PF06645 SPC12: Microsomal sig 25.5 98 0.0021 24.3 3.5 47 179-228 12-58 (76)
306 COG2119 Predicted membrane pro 25.4 5.6E+02 0.012 23.9 10.2 56 42-98 123-178 (190)
307 KOG1237 H+/oligopeptide sympor 24.0 1.3E+02 0.0028 33.6 5.5 65 129-199 454-518 (571)
308 PF01733 Nucleoside_tran: Nucl 23.2 22 0.00047 36.2 -0.8 55 134-194 249-303 (309)
309 PF06912 DUF1275: Protein of u 21.4 6.8E+02 0.015 23.4 15.3 35 181-216 168-202 (209)
310 PF12273 RCR: Chitin synthesis 20.5 44 0.00094 29.2 0.7 16 205-220 1-16 (130)
311 PRK11588 hypothetical protein; 20.5 9.2E+02 0.02 26.5 10.8 36 388-428 133-168 (506)
312 COG1971 Predicted membrane pro 20.4 5.7E+02 0.012 24.0 7.9 78 15-101 106-184 (190)
No 1
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=100.00 E-value=3e-47 Score=412.34 Aligned_cols=535 Identities=45% Similarity=0.786 Sum_probs=479.2
Q ss_pred cCCCcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHH
Q 008158 12 KPGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFAS 91 (575)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~ 91 (575)
+...|+.+.+++..+.+|++++|++..++..|+..++|.+...+...++.+.....+.++.+++++|-|+||.+++.++.
T Consensus 32 ~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s 111 (571)
T KOG1237|consen 32 KTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGS 111 (571)
T ss_pred eechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCccccc
Q 008158 92 IAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVK 171 (575)
Q Consensus 92 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 171 (575)
++..+|.++..++..+|.+.++.| -.++....|..++..+...++.+.-+.++|.|+..|+..++.+|++++..+.++.
T Consensus 112 ~i~~~G~~~lt~~a~~~~l~p~~~-~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~ 190 (571)
T KOG1237|consen 112 LISLLGLFGLTLSAMIPALLPFMC-KFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVK 190 (571)
T ss_pred HHHHHHHHHHHHHHHhhhcCCccc-cCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhh
Confidence 999999999999999999888877 3334444788888888899999999999999999999999999999977777777
Q ss_pred chhhhhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhccceEEeeCCCCCcchhHHHHHHHHHH
Q 008158 172 GINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQVLVAAYK 251 (575)
Q Consensus 172 ~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (575)
++.+.++|+|+..++|..++.++..|+.+..||.+.|.++.++..+++++++...+.|+.+.|.+++.+.+.+++..+.+
T Consensus 191 ~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p~gsp~t~i~~Vlvaa~~ 270 (571)
T KOG1237|consen 191 GIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYKKPRGSPKTRIGQVLVAAAF 270 (571)
T ss_pred CcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEeeCCCCCchhHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999999999999999999999888999999999999999999
Q ss_pred hhcccCCCCCCCCCccccCCCCcccccccCCCcchhhhhhhhhhhccCCCCCCCCCCCCccccchhhHHHhHhhhhhhHH
Q 008158 252 KRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKCLIKIIP 331 (575)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (575)
+++...+. ++++. .............++++++|++.++.+.+. ..+.+..+|+.++.+++++.|.+++.++
T Consensus 271 k~~~~~~~---~~~~~----~~~~~~~~~~~~t~~f~~l~kaa~~~~~~~--~~~~~~~~w~lct~~~Vee~K~~lr~~P 341 (571)
T KOG1237|consen 271 KRKAVVSL---DPEEL----YYDCTDSVAIEGTKPFRFLDKAALKTSDDL--KDGLDANPWRLCTVTQVEEVKAVLRLLP 341 (571)
T ss_pred HHhccCCC---cchhc----cccccccccccCCcccchhhHhhccCCccc--ccccccCCccCCCceehhhhhhhhhhhH
Confidence 98777665 43311 011111122334678899999988765333 5566778999999999999999999999
Q ss_pred HHHHHHHHHHhhccccceeeeecccccccCCCccccCccccccchhHhhHhhhhcccchhHHHhhhhhcCCCCCChHHHH
Q 008158 332 IWAAGIISLTSISQQGTFTVSQAMKMNRHLGPKFQIPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRI 411 (575)
Q Consensus 332 ~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~~~~~~r~~~r~~~~~~~~~i 411 (575)
+|.....+++.+.|..+++..|...|++..++++++|++..+.+..+..++..|++|++..|+.+|..+++.+++.+.++
T Consensus 342 i~~~~i~~~~~~aq~~t~~v~Q~~~mdr~~~~~f~ip~asl~~f~~~~~~~~iplydr~~vP~~~~~t~~~~~~t~lqri 421 (571)
T KOG1237|consen 342 IWLTTIIYSTVYAQMVTFFVLQATTMDRHLGSNFKIPAASLQVFILLSILIFIPLYDRVIVPFARKLTGNPFGITPLQRI 421 (571)
T ss_pred HHHHHHHHHHHHHhhhhheehhhhhcCCCCCCCeEeCchhHHHHHHHHHHhhhhhcceeehhhhhhhcCCCCCCChhhee
Confidence 99999999999999999999999999999984499999999999999999999999999999999999987778999999
Q ss_pred HHHHHHHHHHHHHHHHhHhhhhccccc--CCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHHHHHHHHH
Q 008158 412 GIGMIFSILSMIVAGLVERGRRASAHL--HPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFC 489 (575)
Q Consensus 412 ~ig~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g~~~~ 489 (575)
.+|+++..+++...+..|.+|.+.+.. +...+.|.+|++|+++++|++|.+..+...++..+++|++||+.+++++.+
T Consensus 422 g~G~~~si~sm~~aa~vE~krl~~~~~~~~~~~~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~ 501 (571)
T KOG1237|consen 422 GIGLVLSILSMAVAGIVEAKRLKTAVSLLVETNPMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLL 501 (571)
T ss_pred eccchHHHHHHHHHHHHHHHHhhhhhhccCCCCCeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHH
Confidence 999999999999999999998887654 234678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhcccCCCCCccc-CCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Q 008158 490 SFGFASYLSSLLITIVHGVTARHGHPDWLT-NDIDAGRLDYFYFLIAGLGGLNIVYFLYCARRYRYKSGI 558 (575)
Q Consensus 490 ~~~lg~~l~~~l~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~f~~~a~i~~v~~i~~~~~~~~~~~~~~~ 558 (575)
...+|+.++..+...+...+.+ ..+|.. +++|.++++++|++.+....+....+.++.++|++++.+
T Consensus 502 t~a~G~~lss~Lv~~v~~~t~~--~~~w~~~~~ln~~~ld~Fy~lla~~~~~n~~~~~~~~~~y~~~~~~ 569 (571)
T KOG1237|consen 502 TVAVGNYLSSVLVSLVQFSTGK--AAEWLGFANLNKGRLDYFYWLLAVYSAVNFLYFLICAKRYDYKDDK 569 (571)
T ss_pred HHHHHHHHHHHHHHHHHHhcCC--CcccCChhHhhhhHHHHHHHHHHHHHhhhhhheEEEEEeeeecccc
Confidence 9999999999999988766533 458999 999999999999999999999999999998888877543
No 2
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=100.00 E-value=6.6e-38 Score=323.42 Aligned_cols=459 Identities=19% Similarity=0.278 Sum_probs=347.9
Q ss_pred cCCCcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhC----CChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHH
Q 008158 12 KPGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYH----MNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTI 87 (575)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~----~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~ 87 (575)
...++|..+.+++.|+.||++|||+...+..|+..+++ +|++++..+.+.|....++.++++||++||++|+|+++
T Consensus 16 ~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI 95 (498)
T COG3104 16 FFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTI 95 (498)
T ss_pred cCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH
Confidence 45589999999999999999999999999999999888 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCc
Q 008158 88 TFASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTD 167 (575)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~ 167 (575)
..+.+++.+|.+.++... ......++++.++.++|.|.++|++.++++|++|++++
T Consensus 96 ~lGail~~iGh~~L~~~~------------------------~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dp 151 (498)
T COG3104 96 VLGAILMAIGHLVLAISS------------------------VSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDP 151 (498)
T ss_pred HHHHHHHHHHHHHHhccc------------------------cccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCc
Confidence 999999999999999853 01345689999999999999999999999999999884
Q ss_pred ccccchhhhhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhccceEEeeCC--CCCcchhH---
Q 008158 168 EGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEP--EGSIFSGI--- 242 (575)
Q Consensus 168 ~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~--- 242 (575)
||-..++++|++.|+|++++|.+.+++.+.+||+..|.+.++-..++++.+++.+++...... ...+...-
T Consensus 152 ----rrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~ 227 (498)
T COG3104 152 ----RRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLL 227 (498)
T ss_pred ----ccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhh
Confidence 599999999999999999999999999999999999999999999999999988877644322 11111100
Q ss_pred ---HHHHHHHHHhhcccCCCCCCCCCccccCCCCcccccccCCCcchhhhhhhh----hhhccCCCCCCCCCCCCccccc
Q 008158 243 ---GQVLVAAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKA----AMIVDNNELKPDGTPVNQWRLC 315 (575)
Q Consensus 243 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 315 (575)
...+....... . .. ......++.. .+......+ ....+|
T Consensus 228 ~~~~~~~~~~~~~~-~-~~-------------------------~l~~~~~~~~~~~~~i~~~~~~~----~~~~~~--- 273 (498)
T COG3104 228 PVLGGLVVMILAAL-L-TL-------------------------LLNQNTFSGVLLVISILIAIIYF----AEAFRS--- 273 (498)
T ss_pred hhHHHHHHHHHHHH-H-HH-------------------------HHHHHHHHHHHHHHHHHHHHHHH----HHHhcc---
Confidence 00000000000 0 00 0000000000 000000000 000011
Q ss_pred hhhHHHhHhhhhhhHHHHHHHHHHHHhhccccceeeeec-ccccccCCCccccCccccccchhHhhHhhhhcccchhHHH
Q 008158 316 SIQQVEEVKCLIKIIPIWAAGIISLTSISQQGTFTVSQA-MKMNRHLGPKFQIPPGTVGVISMITIGLWLPFYDTVLVPA 394 (575)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~~~~ 394 (575)
++.. +++++++..+++++...+||+.+.|.++....+. ...++... |+++++++++++|++.+++++|+.+++..++
T Consensus 274 ~~~~-~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~-g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l 351 (498)
T COG3104 274 PKVF-DERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIF-GFEVPPAWFQSLNPFFIILFSPILAALWTKL 351 (498)
T ss_pred CccH-HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhccccc-ceecCHHHHHhhCHHHHHHHHHHHHHHHhHh
Confidence 1112 6899999999999999999999999998554443 44455534 7889999999999999999999999986665
Q ss_pred hhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhcc
Q 008158 395 LRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQ 474 (575)
Q Consensus 395 ~~r~~~r~~~~~~~~~i~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~ 474 (575)
.++. | ..+...++.+|+++++.+++.+.......... ....|.+++++.++++++||.+++|...+++.+.
T Consensus 352 ~~~~--~--~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~-----~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~l 422 (498)
T COG3104 352 GRGN--K--QPSTPIKFALGLILAGLGFLILLLAGIWFGGP-----SGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKL 422 (498)
T ss_pred hcCC--C--CCCcchHHHHHHHHHHHHHHHHHHHHHhhcCC-----CCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHh
Confidence 5553 2 24778899999999999999988774332110 2457899999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 008158 475 FPDHMKSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCARRYR 553 (575)
Q Consensus 475 ~p~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~v~~i~~~~~~~~~~ 553 (575)
+|+.+++..++.+...+..++.++..+.+...+.. +..+......+|+.++.+.++..+..+...++.+
T Consensus 423 aP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~----------~~~~~~~~~~~F~~~g~v~i~~~~~~~~~~~~~~ 491 (498)
T COG3104 423 APPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTD----------PAYTAFIEGRVFGTIGVVAIVIGILLLLLSPKLN 491 (498)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhhceecccccccc----------hhhhhhhhhhhHHHHHHHHHHHHHHHHHhhHHHH
Confidence 99999999999999999999998887776321100 0011113356788888887776666666655433
No 3
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=100.00 E-value=8.5e-37 Score=330.56 Aligned_cols=465 Identities=12% Similarity=0.157 Sum_probs=330.4
Q ss_pred cCCCcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHH
Q 008158 12 KPGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFAS 91 (575)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~ 91 (575)
.+.++|.++.++..+++||+++|++.++++.|+++++|++.++++++.+.+....++.++++|+++||++||||+++.+.
T Consensus 9 ~~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~ 88 (489)
T PRK10207 9 LLQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGA 88 (489)
T ss_pred hhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHH
Confidence 35689999999999999999999999999999999999999999999999999999999999999999459999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCccccc
Q 008158 92 IAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVK 171 (575)
Q Consensus 92 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 171 (575)
+++.++++.++++.+ ....++++|+++|+|.|+..|+..++++|++|+++ +
T Consensus 89 ~~~~~g~~~~~~~~~-------------------------~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~----~ 139 (489)
T PRK10207 89 IVLAIGYFMTGMSLL-------------------------KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKD----P 139 (489)
T ss_pred HHHHHHHHHHHHhcc-------------------------chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCc----h
Confidence 999999999988642 12235688999999999999999999999998765 3
Q ss_pred chhhhhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhccceEEee--CCCCCcchhHHHHH---
Q 008158 172 GINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLV--EPEGSIFSGIGQVL--- 246 (575)
Q Consensus 172 ~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--- 246 (575)
+|.+.++++|++.|+|.++||.+++++.+..|||++|++.++..+++++.++..++++++. +|++++.+.....+
T Consensus 140 ~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~ 219 (489)
T PRK10207 140 RLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLL 219 (489)
T ss_pred hhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHH
Confidence 4788999999999999999999999999999999999997766666666666655444332 22222111000000
Q ss_pred ---HHHHHhhcccCCCCCCCCCccccCCCCcccccccCCCcchhhhhhhhhhhccCCCCCCCCCCCCccccchhhHHHhH
Q 008158 247 ---VAAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEV 323 (575)
Q Consensus 247 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (575)
.....-... .. .. .....-......+... ...++..+. +..++
T Consensus 220 ~~~~~~~~~~~~--~~---~~------------------~~~~~~~~~~~~i~~~----------~f~~~~~~~-~~~~r 265 (489)
T PRK10207 220 GSVVMIFVCAWL--MH---NV------------------EVANLVLIVLSIVVTI----------IFFREAFKL-DKTGR 265 (489)
T ss_pred HHHHHHHHHHHH--Hh---hh------------------hHHHHHHHHHHHHHHH----------HHHHHHhcC-CHHHH
Confidence 000000000 00 00 0000000000000000 000000011 12334
Q ss_pred hhhhhhHHHHHHHHHHHHhhccccceeeeecc-cccccCCCccccCccccccchhHhhHhhhhcccchhHHHhhhhhcCC
Q 008158 324 KCLIKIIPIWAAGIISLTSISQQGTFTVSQAM-KMNRHLGPKFQIPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHE 402 (575)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~~~~~~r~~~r~ 402 (575)
++.+..+.++.....+|..+.|..+....+.. .++.... |+.+++++++++|++.+++..|+.+++ .+|+++|+
T Consensus 266 ~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~-G~~i~~~~~~~~n~~~iii~~pl~~~l----~~rl~~r~ 340 (489)
T PRK10207 266 NKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEIL-GFSINPVSFQALNPFWVVVASPILAGI----YTHLGSKG 340 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhcccccc-ceEECHHHHHhHhHHHHHHHHHHHHHH----HHHHhhCC
Confidence 55555666666677888888887664433332 3444554 778889999999999998999986654 88888776
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHH
Q 008158 403 GGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSI 482 (575)
Q Consensus 403 ~~~~~~~~i~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~ 482 (575)
...++..++.+|+++.+++++.+....... ...+ ...+.+++++.+++.++||.+..|+.++++.+.+|++++|.
T Consensus 341 ~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~---~~~~--~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~ 415 (489)
T PRK10207 341 KDLSMPMKFTLGMFLCSLGFLTAAAAGMWF---ADAQ--GLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGF 415 (489)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHhh---cCCC--CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHH
Confidence 566888999999999998887654332110 0001 13567888899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 008158 483 ANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCARRYRYK 555 (575)
Q Consensus 483 ~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~v~~i~~~~~~~~~~~~ 555 (575)
++|++++...+|+.++..+........ + ...+. ..+..+.++|...+++++++.+++++..++.++.
T Consensus 416 ~~g~~~l~~~ig~~lg~~l~~~~~~~~--~---~~~~~-~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~~ 482 (489)
T PRK10207 416 ILGMWFLTQAAAFLLGGYVATFTAVPD--N---ITDPL-ETLPVYTNVFGKIGLVTLGVAVVMALMVPWLNRM 482 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccc--c---cccch-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998886553100 0 00000 0112467888888888888777777766655443
No 4
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=100.00 E-value=3.2e-35 Score=317.93 Aligned_cols=453 Identities=14% Similarity=0.182 Sum_probs=328.5
Q ss_pred cCCCcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhh--hCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHH
Q 008158 12 KPGGWKAMPYILGNETFERLATIGLLANFMVYLLKE--YHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITF 89 (575)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~ 89 (575)
..+++|.++.++..+++|++++|++.++++.|++++ +|++..+++++.+.+.++..++++++|+++||++|||+++..
T Consensus 5 ~~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~ 84 (475)
T TIGR00924 5 FFGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVL 84 (475)
T ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHH
Confidence 345778888899999999999999999999999988 999999999999999999999999999999994499999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCccc
Q 008158 90 ASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEG 169 (575)
Q Consensus 90 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~ 169 (575)
+.++..++.+..+++. +...++++|++.|+|.|+..|+..++++|++|++++
T Consensus 85 ~~~~~~~g~~~~~~~~--------------------------~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~-- 136 (475)
T TIGR00924 85 GGIVLMLGHFMLAMSI--------------------------YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDM-- 136 (475)
T ss_pred HHHHHHHHHHHHHhcc--------------------------cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCc--
Confidence 9999999998888754 445678899999999999999999999999987542
Q ss_pred ccchhhhhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhccceEEeeCCCCCcchhHH----HH
Q 008158 170 VKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIG----QV 245 (575)
Q Consensus 170 ~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 245 (575)
.+|+++++++|++.|+|.++||.+++++.+.+||++.|++.++..+++++.++..++.+++.++++++..+.. ..
T Consensus 137 -~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (475)
T TIGR00924 137 -PRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKL 215 (475)
T ss_pred -ccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHH
Confidence 3488899999999999999999999999998899999999887766666666665554433222221111000 00
Q ss_pred -------HHHHHHhhcccCCCCCCCCCccccCCCCcccccccCCCcchhhhh-hhhhhhccCCCCCCCCCCCCccccchh
Q 008158 246 -------LVAAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFL-NKAAMIVDNNELKPDGTPVNQWRLCSI 317 (575)
Q Consensus 246 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (575)
+....+..... .. . . ..+..... ........... ..++ +
T Consensus 216 ~~~~~~~~~~~~~~~~~~-~~-----~---------~-------~~~~~~~~~~~~~~~~~~~~------~~~~----~- 262 (475)
T TIGR00924 216 LLALLAALALVFFCAWLM-HH-----V---------V-------IANILLMTVTLAVIIFFFRL------AFKP----R- 262 (475)
T ss_pred HHHHHHHHHHHHHHHHHH-hc-----c---------H-------HHHHHHHHHHHHHHHHHHHH------HHhc----c-
Confidence 00000000000 00 0 0 00000000 00000000000 0000 0
Q ss_pred hHHHhHhhhhhhHHHHHHHHHHHHhhccccce-eeeecccccccCCCccccCccccccchhHhhHhhhhcccchhHHHhh
Q 008158 318 QQVEEVKCLIKIIPIWAAGIISLTSISQQGTF-TVSQAMKMNRHLGPKFQIPPGTVGVISMITIGLWLPFYDTVLVPALR 396 (575)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~~~~~~ 396 (575)
.+..++++....+.+++...++|..+.|..+. ..++...++...+ ++++++++++++|++.+++..|+.+++ ..
T Consensus 263 ~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~-~~~ip~~~~~~~n~~~iil~~p~~~~~----~~ 337 (475)
T TIGR00924 263 LDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEML-GMSVPVIWFQSLNPFWVVVGSPVLAMI----WT 337 (475)
T ss_pred CCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcccccc-ceEECHHHHHhhhHHHHHHHHHHHHHH----HH
Confidence 11123344445677788888899999888774 3444445666665 788999999999999999999987654 55
Q ss_pred hhhcCCCCCChHHHHHHHHHHHHHHHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCC
Q 008158 397 KITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFP 476 (575)
Q Consensus 397 r~~~r~~~~~~~~~i~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p 476 (575)
++.||..+.+...++.+|+++.+++++.+++...... .....+++++++++++.++||.+..|..++++.+.+|
T Consensus 338 ~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~------~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP 411 (475)
T TIGR00924 338 RLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFAD------AGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAP 411 (475)
T ss_pred HHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcC------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCC
Confidence 6655433346677889999999999988876532211 1124688999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 008158 477 DHMKSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCARRYR 553 (575)
Q Consensus 477 ~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~v~~i~~~~~~~~~~ 553 (575)
+++||+++|++.+...+|+.+++.+.+...+.. +...+|...++++++..+++++..++.+
T Consensus 412 ~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (475)
T TIGR00924 412 QRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQ----------------GVTGVFGKIGLVTLLVGVVMALMVPWLN 472 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc----------------chhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998887664421 2345677777777777666666655443
No 5
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=100.00 E-value=5.3e-35 Score=312.51 Aligned_cols=462 Identities=15% Similarity=0.222 Sum_probs=327.6
Q ss_pred CCcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHH
Q 008158 14 GGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIA 93 (575)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l 93 (575)
.++|.++.++..++.+++++|++..+++.|+++++|+++.+++.+.+.+.....++++++|+++||++||||++..+.++
T Consensus 6 ~~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il 85 (493)
T PRK15462 6 SQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALL 85 (493)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHH
Confidence 48889999999999999999999999999999999999999999999999999999999999999944999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccch
Q 008158 94 AILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGI 173 (575)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 173 (575)
..++.++++...+ +...++++..+.++|.|...++..++++|++|+++ .+|
T Consensus 86 ~~lg~lll~~~~~-------------------------~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~----~~R 136 (493)
T PRK15462 86 MAIGHVVLGASEI-------------------------HPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTD----PRR 136 (493)
T ss_pred HHHHHHHHHHhhc-------------------------chhHHHHHHHHHHHhcccccccHHHHHHHHCCCCC----ccc
Confidence 9999877664321 11234555666778888999999999999999764 348
Q ss_pred hhhhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhccceEEeeCC-CCCcchh--HHH-----H
Q 008158 174 NSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEP-EGSIFSG--IGQ-----V 245 (575)
Q Consensus 174 ~~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~--~~~-----~ 245 (575)
.++++++|...|+|+.++|.+++++.+.+||++.|.+.++..+++++.++..++++.+..+ ++++..+ ... .
T Consensus 137 ~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 216 (493)
T PRK15462 137 DGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWL 216 (493)
T ss_pred cceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHH
Confidence 9999999999999999999999999998999999998877777777776665554433211 1111110 000 0
Q ss_pred HHHH-----HHhhcccCCCCCCCCCccccCCCCcccccccCCCcchhhhhhh-hhhhccCCCCCCCCCCCCccccchhhH
Q 008158 246 LVAA-----YKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNK-AAMIVDNNELKPDGTPVNQWRLCSIQQ 319 (575)
Q Consensus 246 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (575)
.... ....... . +.....-. ..+... ....+...+..+
T Consensus 217 ~~~~~~~~~~~~~~~~--~-------------------------~~~~~~~~~~~~~~~---------~~~~~~~~~~~~ 260 (493)
T PRK15462 217 LVLLVATPALITVLFW--K-------------------------EWSVYALIVATIIGL---------GVLAKIYRKAEN 260 (493)
T ss_pred HHHHHHHHHHHHHHHH--H-------------------------HHHHHHHHHHHHHHH---------HHHHHHHHhcCC
Confidence 0000 0000000 0 00000000 000000 000000001123
Q ss_pred HHhHhhhhhhHHHHHHHHHHHHhhccccc-eeeeecccccccCCCccccCccccccchhHhhHhhhhcccchhHHHhhhh
Q 008158 320 VEEVKCLIKIIPIWAAGIISLTSISQQGT-FTVSQAMKMNRHLGPKFQIPPGTVGVISMITIGLWLPFYDTVLVPALRKI 398 (575)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~~~~~~r~ 398 (575)
.+|++++...+.++.....||..+.|.++ ...+...++|+.++ ++++|+++++++|++.+++.+|+..++ ..|+
T Consensus 261 ~~er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~-g~~ip~~~~qslNp~~ii~l~P~~a~l----w~~l 335 (493)
T PRK15462 261 QKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMF-GYTVPTAMFQSINAFAVMLCGVFLAWV----VKES 335 (493)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhc-ceeeCHHHHHhHhHHHHHHHHHHHHHH----HHHH
Confidence 46788988899999999999999999888 44555677888887 899999999999999999999987775 6666
Q ss_pred hcCCCCCChHHHHHHHHHHHHHHHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCch
Q 008158 399 TKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDH 478 (575)
Q Consensus 399 ~~r~~~~~~~~~i~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~ 478 (575)
.||++..+...++.+|+++++++++++.+....... + ...+.++++..++++++||.+..|...+.+.+.+|++
T Consensus 336 ~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~----~--~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~ 409 (493)
T PRK15462 336 VAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAM----Y--GHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPG 409 (493)
T ss_pred hcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCC----C--CCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHH
Confidence 443333477889999999999999888776533111 1 1367888999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHH-HHHHHHHHHHHHHhhhhcccCCCCCcccCCCCcchhHHHHHHHHHHHHHH--HHHHHHHHhhcccc
Q 008158 479 MKSIANSLLFCSF-GFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLN--IVYFLYCARRYRYK 555 (575)
Q Consensus 479 ~rg~~~g~~~~~~-~lg~~l~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~v~--~i~~~~~~~~~~~~ 555 (575)
.+|..+|+++... .+|+.+++.+.......... ++-... -+...+..+|...+.++++. ++.+.+..+..|.|
T Consensus 410 ~~g~~mg~w~l~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~-~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (493)
T PRK15462 410 VTGVLTGIYMLLSGAIANYLAGVIADQTSQASFD---ASGAIN-YSINAYIEVFDQITWGALACVGVVLMIWLYQALKFR 485 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCC---cccccc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999997744 68888887776654321000 000000 01124566777777666554 34444444444443
No 6
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=100.00 E-value=5.4e-34 Score=310.12 Aligned_cols=458 Identities=15% Similarity=0.206 Sum_probs=323.9
Q ss_pred CCcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHH
Q 008158 14 GGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIA 93 (575)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l 93 (575)
.++|.++.++..++++++++|++..+++.|+++++|++.++++++.+.+.......++++|+++||++|||+++..+.++
T Consensus 18 ~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~ 97 (500)
T PRK09584 18 KQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIV 97 (500)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 45577888999999999999999999999999999999999999998888887888889999999933999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccch
Q 008158 94 AILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGI 173 (575)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 173 (575)
+.++.+.++++.+ ....++++|+++|+|.|...++..++++|++|+++ ++|
T Consensus 98 ~~ig~~l~~~~~~-------------------------~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~----~~~ 148 (500)
T PRK09584 98 LAIGYALVAWSGH-------------------------DAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDD----PRL 148 (500)
T ss_pred HHHHHHHHHHhcc-------------------------cHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCc----hhh
Confidence 9999888887531 33457788999999999999999999999998755 346
Q ss_pred hhhhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhccceEEee--CCCCCcchhHH------HH
Q 008158 174 NSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLV--EPEGSIFSGIG------QV 245 (575)
Q Consensus 174 ~~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~------~~ 245 (575)
.++++++|++.++|.++||.+++++.+.+|||+.|++.++..+++++.+++.++.+++. ++++++..... ..
T Consensus 149 ~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (500)
T PRK09584 149 DGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGV 228 (500)
T ss_pred hhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHH
Confidence 67899999999999999999999999989999999988876666666555544433322 12211111100 00
Q ss_pred HHHHHHhhcccCCCCCCCCCccccCCCCcccccccCCCcchhhhhhhhhhhccCCCCCCCCCCCCccccchhhHHHhHhh
Q 008158 246 LVAAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKC 325 (575)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (575)
.......... ... . + ..+..-......... ..++.....+..++++
T Consensus 229 ~~~~~~~~~~-~~~----~----------~-------~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~ 274 (500)
T PRK09584 229 VALIAIATWL-LHN----Q----------E-------IARMALGVVALGIVV------------IFGKEAFAMKGAARRK 274 (500)
T ss_pred HHHHHHHHHH-Hhc----c----------h-------HHHHHHHHHHHHHHH------------HHHHHHhhcCHHHHHH
Confidence 0000000000 000 0 0 000000000000000 0000000112235666
Q ss_pred hhhhHHHHHHHHHHHHhhccccceeeeec-ccccccCCCccccCccccccchhHhhHhhhhcccchhHHHhhhhhcCCCC
Q 008158 326 LIKIIPIWAAGIISLTSISQQGTFTVSQA-MKMNRHLGPKFQIPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGG 404 (575)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~~~~~~r~~~r~~~ 404 (575)
....+.++.....+|..+.|.++.+..+. ...+.... ++.+++++++++|++.+++..|+.++. .+|+++|
T Consensus 275 ~~~~~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~-g~~i~~~~~~s~n~i~iil~~p~~~~~----~~~l~~r--- 346 (500)
T PRK09584 275 MIVAFILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSIL-GIAVEPEQYQALNPFWIMIGSPILAAI----YNKMGDR--- 346 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhcccccc-ceEECHHHHHHHhHHHHHHHHHHHHHH----HHHhCcC---
Confidence 66667777888889999999888655433 23444554 777899999999999999999987665 6777666
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHHHH
Q 008158 405 ITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIAN 484 (575)
Q Consensus 405 ~~~~~~i~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~ 484 (575)
.+..+++.+|+++++++++.+.....+.. .+ ...+.+++++.+++.++||.+..|...+++.+.+|+++||+++
T Consensus 347 ~~~~~~~~~G~~l~~l~f~~l~~~~~~~~----~~--~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~ 420 (500)
T PRK09584 347 LPMPHKFAIGMVLCSGAFLVLPLGAKFAN----DA--GIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIM 420 (500)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHhcC----CC--CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHH
Confidence 36788999999999999998877643211 11 2467778999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCC-CCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 008158 485 SLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTND-IDAGRLDYFYFLIAGLGGLNIVYFLYCARRYRYK 555 (575)
Q Consensus 485 g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~f~~~a~i~~v~~i~~~~~~~~~~~~ 555 (575)
|++.+...+|+.+++.+....... .-..+. ...+++.++|...++++++..++++...++.++.
T Consensus 421 g~~~l~~a~g~~~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~~~~~k~ 485 (500)
T PRK09584 421 GSWFLTTAGAALIAGYVANLMAVP-------DNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLTAPKLNRM 485 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccc-------cccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988888888888777543210 000000 1112467888888887776666666665555443
No 7
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.96 E-value=2.8e-26 Score=253.39 Aligned_cols=333 Identities=28% Similarity=0.534 Sum_probs=264.1
Q ss_pred HHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 008158 31 LATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQL 110 (575)
Q Consensus 31 ~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~ 110 (575)
+++||+.+++..|+.+.+|++++++..+...+.....+.++++|+++|+++||+++++.+.++..+|..+.+++.. |..
T Consensus 1 FsyYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~-~~~ 79 (654)
T TIGR00926 1 FSYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAI-PSS 79 (654)
T ss_pred CceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccC-ccc
Confidence 3689999999999999999999999999999999999999999999999999999999999999999988887542 210
Q ss_pred CCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHH
Q 008158 111 HPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILI 190 (575)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~ 190 (575)
.+ ..+....+++..+.++|.|++.|+..++.+|++++++ +++|.++++++|++.|+|+++
T Consensus 80 ~~-----------------~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~---~~~~~s~F~~fY~~iNiGSli 139 (654)
T TIGR00926 80 GH-----------------PLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQ---LSLRSRFFSFFYFAINAGSLI 139 (654)
T ss_pred cc-----------------chHHHHHHHHHHHHHhhccccccCchhhhHhhcCccc---hhHHHHHHHHHHHHHHHHHHH
Confidence 00 1134457788899999999999999999999998643 346999999999999999999
Q ss_pred Hhhhhhhcccc-------ccchhHhHHHHHHHHHHHHHHHhccceEEeeCCCCCcchhHHHHHHHHHHhhcccCCCCCCC
Q 008158 191 TQTVLVYIQDS-------VSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQVLVAAYKKRRLTLPQGQMD 263 (575)
Q Consensus 191 ~~~v~~~l~~~-------~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (575)
++++.+++.+. .+|..+|.+++++.+++++++...+++++..+|.+++..+..+.+....+++......
T Consensus 140 s~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~~~~~~~---- 215 (654)
T TIGR00926 140 STIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFSTRSE---- 215 (654)
T ss_pred HHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHhhccCCc----
Confidence 99999998743 3699999999999999999888888877666666665555555555554443211111
Q ss_pred CCccccCCCCcccccccCCCcchhhhhhhhhhhccCCCCCCCCCCCCccccchhhHHHhHhhhhhhHHHHHHHHHHHHhh
Q 008158 264 HHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKCLIKIIPIWAAGIISLTSI 343 (575)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (575)
. ....|+|++.... ..++++++|++++.+.+++...++|..+
T Consensus 216 -~-------------------~~~~~ld~a~~~~------------------~~~~V~evkrll~il~l~i~~~ifw~~~ 257 (654)
T TIGR00926 216 -H-------------------WPLHWLDYAKDKH------------------DIRMIRSTKRLLRVLVLFIPLPMFWALF 257 (654)
T ss_pred -c-------------------cchhHHHHhcccc------------------ccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0123444432111 1245678899999999999999999999
Q ss_pred ccccceeeeecccccccCCCccccCccccccchhHhhHhhhhcccchhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHH
Q 008158 344 SQQGTFTVSQAMKMNRHLGPKFQIPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMI 423 (575)
Q Consensus 344 ~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~~~~~~r~~~r~~~~~~~~~i~ig~~~~~~~~~ 423 (575)
.|..+.+..|...++..++ ++.+++.+++.++++.++++.|++++.+.|..+|.+. ..++..++.+|+++++++++
T Consensus 258 ~Q~~s~~~~qa~~m~~~l~-g~~ip~~~lq~~n~L~IIil~Pi~~~~lyp~l~~~~~---~ls~l~k~~iG~~la~la~~ 333 (654)
T TIGR00926 258 DQQGSRWTLQATRMDGDVG-GFEIQPDQMQVVNPLLILIFVPIFDYIVYPAIAKCGT---RFTSLRKMAVGGLLAALSFF 333 (654)
T ss_pred hcchhHHHHHHHHhcCccC-CEecCHHHHHHHHHHHHHHhHHHHHHhHHHHHHhcCC---CCChHHHHHHHHHHHHHHHH
Confidence 9999988888777777776 7889999999999999999999998777776665432 25789999999999999987
Q ss_pred HHHHhHh
Q 008158 424 VAGLVER 430 (575)
Q Consensus 424 ~~~~~~~ 430 (575)
+..+.+.
T Consensus 334 va~~ve~ 340 (654)
T TIGR00926 334 VAALVQL 340 (654)
T ss_pred HHHHHHH
Confidence 7765543
No 8
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.94 E-value=2.2e-24 Score=228.54 Aligned_cols=378 Identities=14% Similarity=0.017 Sum_probs=247.9
Q ss_pred cCCCcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHH
Q 008158 12 KPGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFAS 91 (575)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~ 91 (575)
..+-+|.+..+....++..++.......++.|+++++|.|..+.+++.+.+.++..+++++.|+++||+ ||||++..+.
T Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~ 88 (399)
T PRK05122 10 GLRLTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTL-GPKKAVVFGL 88 (399)
T ss_pred cCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhcc-CCcchHHHHH
Confidence 344556667777788888888777788889999999999999999999999999999999999999995 9999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCccccc
Q 008158 92 IAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVK 171 (575)
Q Consensus 92 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 171 (575)
++..++.+.+.++...+. ....+...+++.|+++|+|.+...+....++.|.+|+++
T Consensus 89 ~~~~~~~~~~~~~~~~~~------------------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~----- 145 (399)
T PRK05122 89 CGCALSGLLYLLAGLLAA------------------WPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALH----- 145 (399)
T ss_pred HHHHHHHHHHHHhhhhhc------------------cchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhh-----
Confidence 988887776655431000 001145678999999999999999999999999998877
Q ss_pred chhhhhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhccceEEeeCCCCCcchhHHHHHHHHHH
Q 008158 172 GINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQVLVAAYK 251 (575)
Q Consensus 172 ~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (575)
|++++++.....++|..+|+.+++++.+..||++.+++.++..++.++.. ++. ++.++++++
T Consensus 146 -r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~------------- 207 (399)
T PRK05122 146 -TGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLLA---RPR-PAVPPVKGE------------- 207 (399)
T ss_pred -hccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH---hcC-CCCCCCCcc-------------
Confidence 99999999999999999999999999888999998876555443322221 111 100000000
Q ss_pred hhcccCCCCCCCCCccccCCCCcccccccCCCcchhhhhhhhhhhccCCCCCCCCCCCCccccchhhHHHhHhhhhhhHH
Q 008158 252 KRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKCLIKIIP 331 (575)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (575)
+ . + ..+..|+.+....
T Consensus 208 -------~-----~---------------------------------------------~-------~~~~~~~~~~~~~ 223 (399)
T PRK05122 208 -------R-----L---------------------------------------------P-------FRRVLGRVWPYGM 223 (399)
T ss_pred -------c-----h---------------------------------------------h-------HHHHHHHHHHHHH
Confidence 0 0 0 0000111111110
Q ss_pred HH-HHHHHHHHhhccccceeeeecccccccCCCccccCccccccchhHhhHhhhhcccchhHHHhhhhhcCCCCCChHHH
Q 008158 332 IW-AAGIISLTSISQQGTFTVSQAMKMNRHLGPKFQIPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQR 410 (575)
Q Consensus 332 ~~-~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~~~~~~r~~~r~~~~~~~~~ 410 (575)
.+ .....+.......+.+.. +.... ..+.......++.++..++. .++.||.+ +++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~------~~~~~-----~~~~~~~~~~~~~~~~~~~~----g~l~~r~~-------~~~~ 281 (399)
T PRK05122 224 GLALASIGFGTIATFITLYYA------ARGWD-----GAALALTLFGVAFVGARLLF----GNLINRLG-------GLRV 281 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHH------Hcccc-----cchHHHHHHHHHHHHHHHHH----HHHHHHhc-------cHHH
Confidence 01 111111111111111110 10000 01111122233333333332 22355543 2344
Q ss_pred HHHHHHHHHHHHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHHHHHHHHHH
Q 008158 411 IGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCS 490 (575)
Q Consensus 411 i~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g~~~~~ 490 (575)
+.++..+..++.+..... .+.+..++..++.|++.+...+.......+..|++.||++.|+++..
T Consensus 282 ~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 346 (399)
T PRK05122 282 AIVSLLVEILGLLLLWLA---------------PSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVF 346 (399)
T ss_pred HHHHHHHHHHHHHHHHHh---------------ccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 566666666665554432 23444556677888988888888888888999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhcccCCCCCcccCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 008158 491 FGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYC 548 (575)
Q Consensus 491 ~~lg~~l~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~v~~i~~~~~ 548 (575)
..+|..+++.+.+.+.+.. +++..|.+.+++.+++.+..+++
T Consensus 347 ~~~g~~~~~~~~g~l~~~~----------------g~~~~~~~~~~~~~~~~~~~~~~ 388 (399)
T PRK05122 347 LDLSLGITGPLAGLVASWF----------------GYPSIFLAAALAALLGLALTWLL 388 (399)
T ss_pred HHHHHHHHHHHHHHHHHHc----------------CHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999887643 45677888888777776665554
No 9
>PRK03545 putative arabinose transporter; Provisional
Probab=99.94 E-value=8.6e-25 Score=231.07 Aligned_cols=371 Identities=12% Similarity=0.060 Sum_probs=236.8
Q ss_pred cchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHH
Q 008158 16 WKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAI 95 (575)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~ 95 (575)
|...+.+....++.....| +...+.+.+.+++|.|.++.+++.+.+.++..++.++.|+++||+ |||+++..+.++..
T Consensus 8 ~~~~~~l~~~~~~~~~~~~-~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~ 85 (390)
T PRK03545 8 WLRVVTLALAAFIFNTTEF-VPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNV-ERRKLLIGLFVLFI 85 (390)
T ss_pred hHHHHHHHHHHHHHHhHHH-HHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ChHHHHHHHHHHHH
Confidence 4333333333444333333 233344678889999999999999999999999999999999995 99999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhh
Q 008158 96 LGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINS 175 (575)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 175 (575)
++++.+++++ +.+.+++.|+++|++.+...+...+++.|++|+++ |++
T Consensus 86 ~~~~~~~~~~--------------------------~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~------r~~ 133 (390)
T PRK03545 86 ASHVLSALAW--------------------------NFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGK------KAQ 133 (390)
T ss_pred HHHHHHHHhc--------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhh------hhh
Confidence 9999988875 67889999999999999988999999999999877 999
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhccceEEeeCCCCCcchhHHHHHHHHHHhhcc
Q 008158 176 FFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQVLVAAYKKRRL 255 (575)
Q Consensus 176 ~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (575)
+++++..+.++|..++|.+++.+.+..|||+.|++.++..++..+..+...|+. +++++. . .+
T Consensus 134 ~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~----~~~~~~-~-~~----------- 196 (390)
T PRK03545 134 ALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLL----PSEHSG-S-LK----------- 196 (390)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCC----CCCCcc-h-HH-----------
Confidence 999999999999999999999998888999999988776555544433322211 110000 0 00
Q ss_pred cCCCCCCCCCccccCCCCcccccccCCCcchhhhhhhhhhhccCCCCCCCCCCCCccccchhhHHHhHhhhhhh-HHHHH
Q 008158 256 TLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKCLIKI-IPIWA 334 (575)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 334 (575)
+.. +..++ +.++.. ...+.
T Consensus 197 -----------------------------------~~~------------------------~~~~~-~~~~~~~~~~~~ 216 (390)
T PRK03545 197 -----------------------------------SLP------------------------LLFRR-PALVSLYLLTVV 216 (390)
T ss_pred -----------------------------------HHH------------------------HHHhC-cHHHHHHHHHHH
Confidence 000 00000 111111 11111
Q ss_pred HHHHHHHhhccccceeeeecccccccCCCcccc-CccccccchhHhhHhhhhcccchhHHHhhhhhcCCCCCChHHHHHH
Q 008158 335 AGIISLTSISQQGTFTVSQAMKMNRHLGPKFQI-PPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGI 413 (575)
Q Consensus 335 ~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~i~~~~~~~~~~~~~~r~~~r~~~~~~~~~i~i 413 (575)
.....+........+. ....+ .+. ..+.......++.++...+ ..|+.+|. ++ +.+.+
T Consensus 217 ~~~~~~~~~~~~~~~l-------~~~~g--~s~~~~~~~~~~~~~~~~~g~~~--------~g~l~dr~---~~-~~~~~ 275 (390)
T PRK03545 217 VVTAHFTAYSYIEPFV-------QQVAG--LSENFATLLLLLFGGAGIIGSVL--------FSRLGNRH---PS-GFLLI 275 (390)
T ss_pred HHHHHHHHHHHHHHHH-------HHhcC--CCccHHHHHHHHHHHHHHHHHHH--------HHHHhhcc---ch-hHHHH
Confidence 1111111111111111 11111 100 0111222223333333332 33333331 11 23444
Q ss_pred HHHHHHHHHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHHHHHHHHHHHHH
Q 008158 414 GMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGF 493 (575)
Q Consensus 414 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~l 493 (575)
+..+..++....... ..+.+.+++..++.|++.....+.....+.+..| +.|++++|+.+....+
T Consensus 276 ~~~~~~~~~~~l~~~--------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~ 340 (390)
T PRK03545 276 AIALLLVCLLLLLPA--------------ANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNI 340 (390)
T ss_pred HHHHHHHHHHHHHHH--------------hchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHH
Confidence 555444444333221 1244455566677788887777777888887776 5889999999999999
Q ss_pred HHHHHHHHHHHhhhhcccCCCCCcccCCCCcchhHHHHHHHHHHHHHHHHHHHHHH
Q 008158 494 ASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCA 549 (575)
Q Consensus 494 g~~l~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~v~~i~~~~~~ 549 (575)
|..+++.+.+.+.|.. ++...|...+++.+++++..+...
T Consensus 341 g~~~G~~~~G~~~~~~----------------g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 341 GIGAGALLGNQVSLHL----------------GLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHHHHHHHHhcc----------------ChhHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999988743 456778888888888877766654
No 10
>PRK12382 putative transporter; Provisional
Probab=99.94 E-value=6.2e-24 Score=224.59 Aligned_cols=373 Identities=12% Similarity=0.042 Sum_probs=238.9
Q ss_pred chhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHH
Q 008158 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (575)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~ 96 (575)
+..+.+.+..++..++.....+.++.|+++++|+|..+.+++.+.+.++..+++++.|+++||+ ||||+++.+.++..+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~~ 93 (392)
T PRK12382 15 FSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQY-GAKRSALQGMLACGL 93 (392)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh-cchHHHHHHHHHHHH
Confidence 3444455566677676666677888899999999999999999999999999999999999995 999999999888777
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhh
Q 008158 97 GMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSF 176 (575)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 176 (575)
+.+........+. ....+...++++|+++|++.+...+...+++.|.+|+++ |+++
T Consensus 94 ~~~~~~~~~~~~~------------------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~a 149 (392)
T PRK12382 94 AGLAYLLAAILPV------------------SAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKH------SGKV 149 (392)
T ss_pred HHHHHHhhhcccc------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc------cchh
Confidence 6654433211110 001266789999999999999988888889999999877 9999
Q ss_pred hHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhccceEEeeCCCCCcchhHHHHHHHHHHhhccc
Q 008158 177 FNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQVLVAAYKKRRLT 256 (575)
Q Consensus 177 ~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (575)
+++++.+.++|..++|.+++++.+.+||++.+.+..+..++.. .+.++ .++.+++++
T Consensus 150 ~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~------------------- 206 (392)
T PRK12382 150 MSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAW---AFNGT-VRKVPAHAG------------------- 206 (392)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHH---HHHHh-ccCCCCCcc-------------------
Confidence 9999999999999999999999888999987765444322222 11111 111110000
Q ss_pred CCCCCCCCCccccCCCCcccccccCCCcchhhhhhhhhhhccCCCCCCCCCCCCccccchhhHHHhHhhhhhh-HHHHHH
Q 008158 257 LPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKCLIKI-IPIWAA 335 (575)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 335 (575)
+ ++ +. .+..+..++. ......
T Consensus 207 --~---~~-----------------------~~------------------------------~~~~~~~~~~~~~~~l~ 228 (392)
T PRK12382 207 --E---RP-----------------------SL------------------------------WSVVGLIWKPGLGLALQ 228 (392)
T ss_pred --c---Cc-----------------------hH------------------------------HHHHHHHHHhHHHHHHH
Confidence 0 00 00 0000111110 000111
Q ss_pred HHHHHHhhccccceeeeecccccccCCCccccCccccccchhHhhHhhhhcccchhHHHhhhhhcCCCCCChHHHHHHHH
Q 008158 336 GIISLTSISQQGTFTVSQAMKMNRHLGPKFQIPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGM 415 (575)
Q Consensus 336 ~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~~~~~~r~~~r~~~~~~~~~i~ig~ 415 (575)
...+.......+.+.. +.... ..+.......++.++..++. ..+.||.++| +.+..+.
T Consensus 229 ~~~~~~~~~~~~~~~~------~~~~~-----~~~~~~~~~~~~~~~~~~~~----g~l~~r~g~~-------~~~~~~~ 286 (392)
T PRK12382 229 GVGFAVIGTFVSLYFA------SKGWA-----MAGFTLTAFGGAFVLMRVLF----GWMPDRFGGV-------KVAIVSL 286 (392)
T ss_pred HHHHhHHHHHHHHHHH------hcCCc-----hhHHHHHHHHHHHHHHHHHH----HHHHHhcCCC-------eehHHHH
Confidence 1111111111111100 11110 01111122233333333332 2336665444 2355566
Q ss_pred HHHHHHHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHHHHHHHHHHHHHHH
Q 008158 416 IFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFAS 495 (575)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~lg~ 495 (575)
.+..++.+..... .+.+...+..++.+++.+...+.......+.+|++.||++.|+.++...+|.
T Consensus 287 ~~~~~~~~~~~~~---------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 351 (392)
T PRK12382 287 LVETVGLLLLWLA---------------PTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAY 351 (392)
T ss_pred HHHHHHHHHHHHc---------------ccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 6666665554432 1334455566778888888888888888999999999999999999999999
Q ss_pred HHHHHHHHHhhhhcccCCCCCcccCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 008158 496 YLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYC 548 (575)
Q Consensus 496 ~l~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~v~~i~~~~~ 548 (575)
.+++.+.+.+.|.. ++...|.+.+++.+++.+..++.
T Consensus 352 ~ig~~~~g~l~~~~----------------g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 352 GVSGPLAGMLATSF----------------GYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHHHHHHh----------------CchHHHHHHHHHHHHHHHHHHhh
Confidence 99999999988753 34677888888777776665544
No 11
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.93 E-value=2.8e-24 Score=227.95 Aligned_cols=168 Identities=12% Similarity=0.134 Sum_probs=151.1
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHH
Q 008158 20 PYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGML 99 (575)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~ 99 (575)
.+++...++.+++.+.+.+.++.|+++++|+|..+.|++.+...+...+..+++|+++||+ |||+++..+.++..++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~-g~k~~l~~~~~~~~~~~~ 91 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRF-GAKPMIVTGMLMRAAGFA 91 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHh-CchHHHHHHHHHHHHHHH
Confidence 6677888899999999999999999999999999999999999999999999999999995 999999999999999998
Q ss_pred HHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHH
Q 008158 100 TVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNW 179 (575)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 179 (575)
.+..++ +.+.+++.|++.|++.+...+...+++.|.+|+++ |++++++
T Consensus 92 ~~~~~~--------------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~a~~~ 139 (400)
T PRK11646 92 TMAIAH--------------------------EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQ------RGRFFSL 139 (400)
T ss_pred HHHHhc--------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHH
Confidence 887754 56778999999999999888988999999999877 9999999
Q ss_pred HHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHH
Q 008158 180 YYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIIL 221 (575)
Q Consensus 180 ~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~ 221 (575)
.+...++|..+||.+++++. .+|||+.|++.++..++..++
T Consensus 140 ~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~ 180 (400)
T PRK11646 140 LMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAF 180 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998 689999999877665544433
No 12
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.93 E-value=1.2e-23 Score=223.20 Aligned_cols=175 Identities=13% Similarity=0.054 Sum_probs=148.2
Q ss_pred cCCCcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHH
Q 008158 12 KPGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFAS 91 (575)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~ 91 (575)
.+.+|..+.......+++.+..+.. ....+.+.+++|+|+.+.+++.+.+.++..++.++.|+++||+ |||+++..+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~ 87 (406)
T PRK11551 10 SSRLALTIGLCFLVALLEGLDLQSA-GVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRI-GRKRILIVSV 87 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHH
Confidence 3456666666667777777665543 4445667788999999999999999999999999999999995 9999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCccccc
Q 008158 92 IAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVK 171 (575)
Q Consensus 92 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 171 (575)
++..++.+.++++. +.+.+++.|++.|++.+...+...+++.|.+|+++
T Consensus 88 ~~~~~~~~~~~~~~--------------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~----- 136 (406)
T PRK11551 88 ALFGLFSLATAQAW--------------------------DFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRL----- 136 (406)
T ss_pred HHHHHHHHHHHHhc--------------------------cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHH-----
Confidence 99888888777754 56778999999999999999999999999999877
Q ss_pred chhhhhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHH
Q 008158 172 GINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAII 220 (575)
Q Consensus 172 ~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~ 220 (575)
|++++++++.+.++|..+++.+++.+.+..+||+.|++.+++.++..+
T Consensus 137 -r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (406)
T PRK11551 137 -RGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVP 184 (406)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998888888999999887665444443
No 13
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.93 E-value=8.8e-24 Score=225.42 Aligned_cols=392 Identities=14% Similarity=0.014 Sum_probs=238.0
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHH
Q 008158 21 YILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLT 100 (575)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~ 100 (575)
.++..+++..++.......++. +.++++.+..+.+++.+.+.++..++.++.|+++||+ |||+++..+..+..++.+.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~-g~~~~l~~~~~~~~~~~~~ 98 (417)
T PRK10489 21 AVFIARFISIFGLGLLGVAVPV-QIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRY-DRKKLILLARGTCGLGFIG 98 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc-CCceEEEehHHHHHHHHHH
Confidence 4444455555554333344444 4557788999999999999999999999999999995 9999999888887777666
Q ss_pred HHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHH
Q 008158 101 VTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWY 180 (575)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 180 (575)
.+.....+ ..+.+.+++.|++.|++.+...+...+++.|.+|+++ |+++.++.
T Consensus 99 ~~~~~~~~---------------------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 151 (417)
T PRK10489 99 LALNAFLP---------------------EPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGREN------LMQAGAIT 151 (417)
T ss_pred HHHHHHcC---------------------CCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHH------HHHHHHHH
Confidence 54321000 1156778889999999988888888899999998866 99999999
Q ss_pred HHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhccceEEeeCCCCCcchhHHHHHHHHHHhhcccCCCC
Q 008158 181 YTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQVLVAAYKKRRLTLPQG 260 (575)
Q Consensus 181 ~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (575)
+...++|..+||.+++++.+..+|++.|++.++..++..+..+..++. ++++.+..+ +.
T Consensus 152 ~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~----------------~~- 210 (417)
T PRK10489 152 MLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRLPAL----PPPPQPREH----------------PL- 210 (417)
T ss_pred HHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCCCC----CCCCccccc----------------ch-
Confidence 999999999999999999888899999988776665555444332211 111000000 00
Q ss_pred CCCCCccccCCCCcccccccCCCcchhhhhhhhhhhccCCCCCCCCCCCCccccchhhHHHhHhhhhhhHHHHHHHHHHH
Q 008158 261 QMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKCLIKIIPIWAAGIISL 340 (575)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (575)
.+..+ .+ ......+.+ +.. +..... .
T Consensus 211 --------------------------~~~~~-------------------~~-----~~~~~~~~~-~~~--~~~~~~-~ 236 (417)
T PRK10489 211 --------------------------RSLLA-------------------GF-----RFLLASPVV-GGI--ALLGGL-L 236 (417)
T ss_pred --------------------------HHHHH-------------------HH-----HHHHcChHH-HHH--HHHHHH-H
Confidence 00000 00 000000111 111 111011 0
Q ss_pred HhhccccceeeeecccccccCCCccc-cCccccccchhHhhHhhhhcccchhHHHhhhhhcCCCCCChHHHHHHHHHHHH
Q 008158 341 TSISQQGTFTVSQAMKMNRHLGPKFQ-IPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSI 419 (575)
Q Consensus 341 ~~~~~~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~i~~~~~~~~~~~~~~r~~~r~~~~~~~~~i~ig~~~~~ 419 (575)
......... .+.+.....+ .+ ...+.+.....++.++...+ ..++.+|. ++.+.+..+..+..
T Consensus 237 ~~~~~~~~~---~p~~~~~~~g--~~~~~~g~~~~~~~~g~~ig~~~--------~~~l~~~~---~~~~~l~~~~~~~~ 300 (417)
T PRK10489 237 TMASAVRVL---YPALADEVWQ--MGAAQIGLLYAAVPLGAALGALT--------SGWLAHSA---RPGLLMLLSTLGSF 300 (417)
T ss_pred HHHHhHHHh---hHHHHHhccC--CChhHhHHHHHHHHHHHHHHHHH--------HHHhhhcc---CcchHHHHHHHHHH
Confidence 001111111 1111122121 10 01222233333444444333 22332221 22234555666666
Q ss_pred HHHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHHHHHHHHHHHHHHHHHHH
Q 008158 420 LSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSS 499 (575)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~lg~~l~~ 499 (575)
++++.+... .+++......++.|++.+...+...+++.+.+|++.||+++|+.++...+|..+++
T Consensus 301 ~~~~~~~~~---------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~ 365 (417)
T PRK10489 301 LAVGLFGLM---------------PMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGA 365 (417)
T ss_pred HHHHHHHcc---------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHH
Confidence 665544322 24444555667778888777788888999999999999999999999999999999
Q ss_pred HHHHHhhhhcccCCCCCcccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccc
Q 008158 500 LLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCARRYRYKSGIQSLED 563 (575)
Q Consensus 500 ~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~v~~i~~~~~~~~~~~~~~~~~~~~ 563 (575)
.+.+++.+.. +....+...+++.++..++.+...+++|++++++.+++
T Consensus 366 ~l~G~l~~~~----------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (417)
T PRK10489 366 ALLGGLGAMM----------------TPVASASASGFGLLIIGVLLLLVLGELRRFRQTPPEVD 413 (417)
T ss_pred HHHHHHHHHh----------------chhhHHHHHHHHHHHHHHHHHHhcccccccccccccCC
Confidence 9999988753 23345555565555554555555566666555554444
No 14
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.93 E-value=1.3e-23 Score=229.21 Aligned_cols=176 Identities=15% Similarity=0.068 Sum_probs=146.4
Q ss_pred cchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHH
Q 008158 16 WKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAI 95 (575)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~ 95 (575)
|..+..+.+..++..+... +.....+.+.+++|.+.++.+|+.+.|.++...+.++.|+++||+ |||++++.+.+++.
T Consensus 5 ~~~~~~~~~~~~~~~ld~t-iv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~-Grk~~l~~~~~~~~ 82 (495)
T PRK14995 5 WLTLVIIVLVYIPVAIDAT-VLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRI-GFKRLLMLGGTLFG 82 (495)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHH
Confidence 4444555555555555533 444555666789999999999999999999999999999999995 99999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCC-CCCCcccccchh
Q 008158 96 LGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQF-DATTDEGVKGIN 174 (575)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~-~~~~~~~~~~r~ 174 (575)
++++++++++ +.+.++++|+++|+|.++..+.....+.+.+ |+++ |+
T Consensus 83 ~~~~~~~~a~--------------------------~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~------r~ 130 (495)
T PRK14995 83 LASLAAAFSP--------------------------TASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQ------RN 130 (495)
T ss_pred HHHHHHHHcC--------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH------HH
Confidence 9999999875 6788999999999999998888888787776 4444 99
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhc
Q 008158 175 SFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVG 225 (575)
Q Consensus 175 ~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~ 225 (575)
++++++....++|..+||.+++++.+..||||.|++...+.++.+++.+..
T Consensus 131 ~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~ 181 (495)
T PRK14995 131 MALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARY 181 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999998776655555544433
No 15
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.93 E-value=4e-23 Score=211.92 Aligned_cols=381 Identities=12% Similarity=0.071 Sum_probs=257.2
Q ss_pred cccccCCCcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHH
Q 008158 8 KDQKKPGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTI 87 (575)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~ 87 (575)
.+++.+..|..++.+.+..|.-...-|.... +.+.+.+++|.|..++|+++++|.++..++.|+...+.||+ .||+++
T Consensus 4 ~~~~~~~~~~~l~aLa~~~F~igttEfv~~g-LLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~-~Rr~lL 81 (394)
T COG2814 4 PATARKPMWLALLALALAAFAIGTTEFVPVG-LLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL-ERRRLL 81 (394)
T ss_pred cccccccchHHHHHHHHHHHHHHhHHHHHHh-chHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc-chHHHH
Confidence 3345566777777766666666555554443 44567889999999999999999999999999999999995 999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCc
Q 008158 88 TFASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTD 167 (575)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~ 167 (575)
+..+.+++++.++++++. ++..++++|++.|+..|.+.+...++.+|..|+++
T Consensus 82 l~~l~lFi~~n~l~alAp--------------------------~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~- 134 (394)
T COG2814 82 LGLLALFIVSNLLSALAP--------------------------SFAVLLLARALAGLAHGVFWSIAAALAARLVPPGK- 134 (394)
T ss_pred HHHHHHHHHHHHHHHHhc--------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc-
Confidence 999999999999999987 78899999999999999999999999999999988
Q ss_pred ccccchhhhhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhccceEEeeCCCCCcchhHHHHHH
Q 008158 168 EGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQVLV 247 (575)
Q Consensus 168 ~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (575)
|+++.++...+.+++..+|..++.++.+.+|||..|+..+.+.++.++..+...| +++.+++.+. . .+
T Consensus 135 -----~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~~~~~~~-~-~~--- 202 (394)
T COG2814 135 -----RGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP--PSEISGSLPG-P-LR--- 202 (394)
T ss_pred -----hhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--CccCCCCCCc-c-hh---
Confidence 9999999999999999999999999999999999999888887777776665544 1111110000 0 00
Q ss_pred HHHHhhcccCCCCCCCCCccccCCCCcccccccCCCcchhhhhhhhhhhccCCCCCCCCCCCCccccchhhHHHhHhhhh
Q 008158 248 AAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKCLI 327 (575)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (575)
++.....+++++
T Consensus 203 --------------------------------------------------------------------~~~~~l~~p~v~ 214 (394)
T COG2814 203 --------------------------------------------------------------------TLLRLLRRPGVL 214 (394)
T ss_pred --------------------------------------------------------------------HHHHHhcCchHH
Confidence 000000011111
Q ss_pred h-hHHHHHHHHHHHHhhccccceeeeecccccccCCCcccc-CccccccchhHhhHhhhhcccchhHHHhhhhhcCCCCC
Q 008158 328 K-IIPIWAAGIISLTSISQQGTFTVSQAMKMNRHLGPKFQI-PPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGI 405 (575)
Q Consensus 328 ~-~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~i~~~~~~~~~~~~~~r~~~r~~~~ 405 (575)
. ....++.....+..|.+..++. +... ++.. .-+......+++..+...+.+++ .||
T Consensus 215 ~~l~~t~l~~~g~F~~ftYi~P~L-------~~v~--g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl----~dr-------- 273 (394)
T COG2814 215 LGLLATFLFMTGHFALYTYIRPFL-------ESVA--GFSVSAVSLVLLAFGIAGFIGNLLGGRL----ADR-------- 273 (394)
T ss_pred HHHHHHHHHHcchhhhHHhHHHHH-------HHcc--CCCHhHHHHHHHHHHHHHHHHHHHHhhh----ccc--------
Confidence 1 1111122222233333322222 1111 1111 11222334455555554443333 444
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCC--chhHHHH
Q 008158 406 TLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFP--DHMKSIA 483 (575)
Q Consensus 406 ~~~~~i~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p--~~~rg~~ 483 (575)
+.++.+.....+..+.++.+.... .+.+......++.+++... ..+.+..+.++ ++.++.+
T Consensus 274 ~~~~~l~~~~~l~a~~~l~l~~~~--------------~~~~~~~~~~~~wg~a~~~---~~~~~~~~~a~~~p~~~~~a 336 (394)
T COG2814 274 GPRRALIAALLLLALALLALTFTG--------------ASPALALALLFLWGFAFSP---ALQGLQTRLARLAPDAADLA 336 (394)
T ss_pred cchhHHHHHHHHHHHHHHHHHHhc--------------chHHHHHHHHHHHHHHhhh---hhhHHHHHhcccCCCchHHH
Confidence 233445555566666666655431 2333444444444544444 44444444444 6779999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 008158 484 NSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCARR 551 (575)
Q Consensus 484 ~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~v~~i~~~~~~~~ 551 (575)
.+++....++|..+|..+.+.+.|.. ++....++.+.+.+++.+..+...++
T Consensus 337 ~sl~~aa~nlgia~GA~lGG~v~~~~----------------g~~~~~~~~a~l~~~a~~~~~~~~~~ 388 (394)
T COG2814 337 GSLNVAAFNLGIALGAALGGLVLDAL----------------GYAATGWVGAALLLLALLLALLSARK 388 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh----------------chHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999998743 66788888888888887777765443
No 16
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.93 E-value=2.2e-23 Score=223.55 Aligned_cols=166 Identities=12% Similarity=0.083 Sum_probs=138.8
Q ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHH
Q 008158 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGM 98 (575)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~ 98 (575)
+...+...++..+..+.... ..+.+.+++|+|..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~ 102 (434)
T PRK11663 25 LITMYLGYALFYFTRKSFNA-AMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRS-NARYFMGIGLIATGIIN 102 (434)
T ss_pred HHHHHHHHHHHHHhhhhHHH-hhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc-CCchhHHHHHHHHHHHH
Confidence 33334444444443333334 44555667999999999999999999999999999999995 99999999999999999
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhH
Q 008158 99 LTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFN 178 (575)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 178 (575)
++.+++. +.+.+++.|++.|++.|...+....++.|++|+++ |+++++
T Consensus 103 ~~~~~~~--------------------------~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~------rg~~~~ 150 (434)
T PRK11663 103 ILFGFSS--------------------------SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTE------RGGWWA 150 (434)
T ss_pred HHHHHHh--------------------------HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHH------HHHHHH
Confidence 9888865 66778889999999999989999999999999877 999999
Q ss_pred HHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHH
Q 008158 179 WYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGA 218 (575)
Q Consensus 179 ~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~ 218 (575)
+++.+.++|..+++.+++++.+.+|||+.|++.++..++.
T Consensus 151 ~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~ 190 (434)
T PRK11663 151 IWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVV 190 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHH
Confidence 9999999999999999999998899999999877654433
No 17
>PRK10054 putative transporter; Provisional
Probab=99.93 E-value=2.3e-23 Score=220.68 Aligned_cols=175 Identities=12% Similarity=0.170 Sum_probs=152.3
Q ss_pred CCcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHH
Q 008158 14 GGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIA 93 (575)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l 93 (575)
...|+.+.++...++...+.+.+.++++.|+++++|+|..+.|++.+.+.++..++.++.|+++||+ |||+++..+.++
T Consensus 4 ~~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~k~~~~~~~~~ 82 (395)
T PRK10054 4 SLRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKF-DKKRYMLLAITA 82 (395)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcchhHHHHHHH
Confidence 3455677778888999999898999999999999999999999999999999999999999999995 999999999998
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccch
Q 008158 94 AILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGI 173 (575)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 173 (575)
..++.+..++++ +.+.+++.|.+.|.+.+...++..++..|.+|+++ |
T Consensus 83 ~~~~~~~~~~~~--------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~ 130 (395)
T PRK10054 83 FASGFIAIPLVN--------------------------NVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTS------K 130 (395)
T ss_pred HHHHHHHHHHHh--------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhH------H
Confidence 888888887765 55667778888888878888888999999998776 9
Q ss_pred hhhhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHH
Q 008158 174 NSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILF 222 (575)
Q Consensus 174 ~~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~ 222 (575)
++.+++.+...++|..++|.+++++.+ .+|+..|++.+++.++.+++.
T Consensus 131 ~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~ 178 (395)
T PRK10054 131 TKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFI 178 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999875 799999998777666654443
No 18
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.92 E-value=3.9e-23 Score=231.24 Aligned_cols=179 Identities=10% Similarity=0.039 Sum_probs=143.4
Q ss_pred cCCCcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHH
Q 008158 12 KPGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFAS 91 (575)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~ 91 (575)
++.+|+.+..+....+++.+.. .+...+.+++.+++|++..+.+++.+++.++..++.+++|+++||+ |||+++++++
T Consensus 162 ~~~~~~l~~i~~l~~~~~g~d~-~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~-GRR~~lii~l 239 (742)
T TIGR01299 162 GRFQWALFFVLGLALMADGVEV-FVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKL-GRKQCLLICL 239 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHH
Confidence 3444444444444444443332 3455667788889999999999999999999999999999999995 9999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCccccc
Q 008158 92 IAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVK 171 (575)
Q Consensus 92 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 171 (575)
++..++.++++++. +.+.++++|++.|+|.|+..+...++++|.+|++.
T Consensus 240 il~~i~~ll~afa~--------------------------s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~----- 288 (742)
T TIGR01299 240 SVNGFFAFFSSFVQ--------------------------GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEK----- 288 (742)
T ss_pred HHHHHHHHHHHHHh--------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH-----
Confidence 99999998888765 57789999999999999999999999999999877
Q ss_pred chhhhhHHHHHHHHHHHHHHhhhhhhccc-------------cccchhHhHHHHHHHHHHHHHHHh
Q 008158 172 GINSFFNWYYTTFTVVILITQTVLVYIQD-------------SVSWVIGFGIPTVLMIGAIILFLV 224 (575)
Q Consensus 172 ~r~~~~~~~~~~~~ig~~~~~~v~~~l~~-------------~~gw~~~f~~~~~~~~i~~~~~~~ 224 (575)
|+..++++..+..+|.++++.++.++.. ..+||+.|++.++..++.+++.++
T Consensus 289 -Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~ 353 (742)
T TIGR01299 289 -RGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTF 353 (742)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999877655432 236899888877766655554444
No 19
>PRK10504 putative transporter; Provisional
Probab=99.92 E-value=6e-23 Score=222.50 Aligned_cols=177 Identities=13% Similarity=0.021 Sum_probs=148.6
Q ss_pred chhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHH
Q 008158 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (575)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~ 96 (575)
+..+.+....++..+..+.+...++.+. +++|.+..+.+++.+.+.++..++.+++|+++||+ |||++++.+.+++.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~ 87 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMA-QSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRV-GVRNIFFTAIVLFTL 87 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHH-HHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHH
Confidence 3455566667777777776666666665 57999999999999999999999999999999995 999999999989888
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhh
Q 008158 97 GMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSF 176 (575)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 176 (575)
+.+.+.++. +.+.+++.|+++|++.++..+...+++.|.+|+++ |+++
T Consensus 88 ~~~~~~~~~--------------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~ 135 (471)
T PRK10504 88 GSLFCALSG--------------------------TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQ------YMAA 135 (471)
T ss_pred HHHHHHHhC--------------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHH------HHHH
Confidence 888877654 56778999999999999999999999999999766 9999
Q ss_pred hHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhccc
Q 008158 177 FNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKK 227 (575)
Q Consensus 177 ~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~ 227 (575)
+++.+...++|..+||.+++++.+..|||+.|++..+...+..++.....+
T Consensus 136 ~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~ 186 (471)
T PRK10504 136 MTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMP 186 (471)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999899999999877665555555444333
No 20
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.92 E-value=2.6e-23 Score=217.74 Aligned_cols=156 Identities=8% Similarity=-0.026 Sum_probs=125.8
Q ss_pred hhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 008158 35 GLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPK 114 (575)
Q Consensus 35 ~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 114 (575)
..+....+.+++++|+|.++.+++.+.+.+++.+++++.|+++||+ |||+++..+......+.. ......
T Consensus 8 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~-~~~~~~-------- 77 (368)
T TIGR00903 8 VTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRA-FKRWFLFGSLATFAAAAG-RLLDPF-------- 77 (368)
T ss_pred HHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHH-HHHHhc--------
Confidence 3456667778889999999999999999999999999999999995 999987665555544432 222211
Q ss_pred CCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhh
Q 008158 115 CDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTV 194 (575)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v 194 (575)
+...+++.|+++|+|.+.. +......+|++|+++ |++++++.+.+.++|..+++.+
T Consensus 78 -----------------~~~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~------r~~a~~~~~~~~~lG~~l~~~~ 133 (368)
T TIGR00903 78 -----------------NYEWLLACQLLAALGQPFL-LNAFAPAASQIREER------RDLVISLLSFAMYLGIIFALAA 133 (368)
T ss_pred -----------------cHHHHHHHHHHHHhHhHHH-HHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 5778999999999999864 455566799999877 9999999999999999999999
Q ss_pred hhhccccccchhHhHHHHHHHHHHHHHHHh
Q 008158 195 LVYIQDSVSWVIGFGIPTVLMIGAIILFLV 224 (575)
Q Consensus 195 ~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 224 (575)
++++.+.+|||+.|++.+++.++..+++++
T Consensus 134 ~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~ 163 (368)
T TIGR00903 134 GLKIYTAGGLQLLIIPIAAVAAAGIILVLA 163 (368)
T ss_pred HHHHHHccchHHHHHHHHHHHHHHHHHHHH
Confidence 999998899999999866665554444433
No 21
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.92 E-value=1.7e-23 Score=219.28 Aligned_cols=156 Identities=16% Similarity=0.102 Sum_probs=138.6
Q ss_pred hHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 008158 36 LLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKC 115 (575)
Q Consensus 36 ~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 115 (575)
......+++.+++|++..+.+++.+++.++..++.++.|+++||+ |||+++..+.++..++.+.++++.
T Consensus 12 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~~---------- 80 (399)
T TIGR00893 12 NLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF-GARKTLAVFIVIWGVFTGLQAFAG---------- 80 (399)
T ss_pred hhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc-CcceeeHHHHHHHHHHHHHHHHHc----------
Confidence 345566778999999999999999999999999999999999995 999999999999999998888865
Q ss_pred CCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhh
Q 008158 116 DVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVL 195 (575)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~ 195 (575)
+.+.+++.|++.|++.+...+....++.|.+|+++ |++.+++.+...++|..+++.++
T Consensus 81 ----------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~ 138 (399)
T TIGR00893 81 ----------------AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASE------RATAVSIFNSAQGLGGIIGGPLV 138 (399)
T ss_pred ----------------CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHH------HHHHHHHHHHhchHHHHHHHHHH
Confidence 67789999999999999999999999999999877 99999999999999999999999
Q ss_pred hhccccccchhHhHHHHHHHHHHHHHHHh
Q 008158 196 VYIQDSVSWVIGFGIPTVLMIGAIILFLV 224 (575)
Q Consensus 196 ~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 224 (575)
+++.+..+||+.|++.++..++..++.++
T Consensus 139 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (399)
T TIGR00893 139 GWILIHFSWQWAFIIEGVLGIIWGVLWLK 167 (399)
T ss_pred HHHHHhCCchHHHHHHHHHHHHHHHHhhh
Confidence 99888899999999877665555444433
No 22
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.92 E-value=2.5e-23 Score=225.74 Aligned_cols=191 Identities=12% Similarity=0.047 Sum_probs=141.2
Q ss_pred cCCCcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhh--------CCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccc
Q 008158 12 KPGGWKAMPYILGNETFERLATIGLLANFMVYLLKEY--------HMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGR 83 (575)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l--------~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr 83 (575)
.+.+.+..+......+.+.+... +.....+.+++.+ |.+..+.+++.+++.++..++++++|+++||+ ||
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~-Gr 84 (479)
T PRK10077 7 SSYIFSITLVATLGGLLFGYDTA-VISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRF-GR 84 (479)
T ss_pred chHHHHHHHHHHHHHHhcCcccc-eehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-cc
Confidence 34455555555555444444322 3333334455555 88999999999999999999999999999995 99
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCC
Q 008158 84 FKTITFASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFD 163 (575)
Q Consensus 84 r~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~ 163 (575)
|++++.+.+++.++.+.++++...-.... ..+......++++|+++|++.|+..+...++++|++|
T Consensus 85 r~~~~~~~~l~~i~~~~~~~~~~~~~~~~--------------~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~ 150 (479)
T PRK10077 85 RDSLKIAAVLFFISALGSAWPEFGFTSIG--------------PDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAP 150 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccccccc--------------ccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCC
Confidence 99999999999988887776321000000 0011245678899999999999999999999999999
Q ss_pred CCCcccccchhhhhHHHHHHHHHHHHHHhhhhhhcc--------ccccchhHhHHHHHHHHHHHHHHHh
Q 008158 164 ATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQ--------DSVSWVIGFGIPTVLMIGAIILFLV 224 (575)
Q Consensus 164 ~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~--------~~~gw~~~f~~~~~~~~i~~~~~~~ 224 (575)
+++ |++++++...+..+|..+++.+++.+. +.+|||+.|++.++..++.++..++
T Consensus 151 ~~~------rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~ 213 (479)
T PRK10077 151 AHI------RGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYF 213 (479)
T ss_pred hhh------hhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHc
Confidence 887 999999999999999999887765432 4579999999877666555544443
No 23
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.92 E-value=4.2e-23 Score=219.00 Aligned_cols=388 Identities=13% Similarity=0.081 Sum_probs=241.6
Q ss_pred cccCCCcch-hHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhh-----HHHHHHHHHHHHHHHhhhhHHHhhhcccc
Q 008158 10 QKKPGGWKA-MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTS-----AANILNIWGGVTNFAPLLGAFISDTYIGR 83 (575)
Q Consensus 10 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~-----~~~i~~~~~~~~~~~~~~~G~laD~~~Gr 83 (575)
+..+.+|+. ...+....++..+++......++.|++ ++|++..+ .+++.+++.+...++.++.|+++||+ ||
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~ 83 (408)
T PRK09874 6 NDTPINWKRNLTVAWLGCFLTGAAFSLVMPFLPLYVE-QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK-GR 83 (408)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHH-HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-Cc
Confidence 455555655 444556677777776666677777775 68888655 38889999999999999999999995 99
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCC
Q 008158 84 FKTITFASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFD 163 (575)
Q Consensus 84 r~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~ 163 (575)
|+++..+.++..++.+.+..+. +.+.+++.|++.|++.+ ..+...+++.|.+|
T Consensus 84 r~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~ 136 (408)
T PRK09874 84 KIMLLRSALGMGIVMVLMGLAQ--------------------------NIWQFLILRALLGLLGG-FVPNANALIATQVP 136 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh--------------------------hHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcC
Confidence 9999999998888888877654 56778999999999865 45777788899998
Q ss_pred CCCcccccchhhhhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhccceEEeeCCCCCcchhHH
Q 008158 164 ATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIG 243 (575)
Q Consensus 164 ~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (575)
+++ |+++.++++...++|..++|.+++++.+..+||+.|++.+++.++..+..++..++..+ +.+++....
T Consensus 137 ~~~------~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~- 207 (408)
T PRK09874 137 RNK------SGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQ--PVSKKEMLH- 207 (408)
T ss_pred Hhh------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcc--cccchhhhH-
Confidence 877 99999999999999999999999999888899999998777655554443332221110 000000000
Q ss_pred HHHHHHHHhhcccCCCCCCCCCccccCCCCcccccccCCCcchhhhhhhhhhhccCCCCCCCCCCCCccccchhhHHHhH
Q 008158 244 QVLVAAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEV 323 (575)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (575)
.+ +... ..++.
T Consensus 208 ------~~---------------------------------------~~~~------------------------~~~~~ 218 (408)
T PRK09874 208 ------MR---------------------------------------EVVT------------------------SLKNP 218 (408)
T ss_pred ------HH---------------------------------------HHHH------------------------hCcCC
Confidence 00 0000 00000
Q ss_pred hhhhhhHHHHHHHHHHHHhhccccceeeeecccccccCCCccccCccccccchhHhhHhhhhcccchhHHHhhhhhcCCC
Q 008158 324 KCLIKIIPIWAAGIISLTSISQQGTFTVSQAMKMNRHLGPKFQIPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEG 403 (575)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~~~~~~r~~~r~~ 403 (575)
+......... ...........+....+......... ......+.+..+..++.++..+... .+.||.++|
T Consensus 219 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~l~~~~~~~~~g----~l~dr~g~~-- 288 (408)
T PRK09874 219 KLVLSLFVTT---LIIQVATGSIAPILTLYVRELAGNVS-NIAFISGMIASVPGVAALLSAPRLG----KLGDRIGPE-- 288 (408)
T ss_pred chHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhccch-HHHHHHHHHHHHHHHHHHHHHHHHH----HHHhccccc--
Confidence 0000000000 01111111110110000000000000 0000011111222233333333322 235555433
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHHH
Q 008158 404 GITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIA 483 (575)
Q Consensus 404 ~~~~~~~i~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~ 483 (575)
+.+.++..+..++.+..... .+.+...+..++.|++.+...|...+.+.+..|++.+|+.
T Consensus 289 -----~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~ 348 (408)
T PRK09874 289 -----KILITALIFSVLLLIPMSFV---------------QTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRI 348 (408)
T ss_pred -----hhHHHHHHHHHHHHHHHHHh---------------ccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceee
Confidence 34555555555544443322 1344455566778899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHh
Q 008158 484 NSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCAR 550 (575)
Q Consensus 484 ~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~v~~i~~~~~~~ 550 (575)
.++.+....+|..+++.+.+.+.+.. ++...|.+.+++.+++.+..+...+
T Consensus 349 ~~~~~~~~~~g~~~gp~~~G~l~~~~----------------g~~~~f~~~~~~~l~~~~~~~~~~~ 399 (408)
T PRK09874 349 FSYNQSFRDIGNVTGPLMGAAISANY----------------GFRAVFLVTAGVVLFNAVYSWNSLR 399 (408)
T ss_pred ehHHHHHHHHHHHhhHHHHHHHHhhc----------------chhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999887643 4567888888888887666655433
No 24
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.92 E-value=1e-23 Score=228.26 Aligned_cols=159 Identities=13% Similarity=0.092 Sum_probs=130.4
Q ss_pred HHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 008158 37 LANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCD 116 (575)
Q Consensus 37 ~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 116 (575)
.....+.+.+++|+|.++.|++.+.+.+++.++.++.|+++||+ |||+++..+.++..++++..+....
T Consensus 48 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~~---------- 116 (467)
T PRK09556 48 FKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGK-NTKQFLPFLLILSAICMLGFGASLG---------- 116 (467)
T ss_pred hhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc-CccchHHHHHHHHHHHHHHHHHHHh----------
Confidence 34456778899999999999999999999999999999999995 9999999988888877776665310
Q ss_pred CCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhh
Q 008158 117 VAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLV 196 (575)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~ 196 (575)
....+.+.+++.|++.|++.+...|....+++|++|+++ |+++++++..+.++|..+++.+..
T Consensus 117 -----------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------rg~a~gi~~~~~~lG~~l~~~i~~ 179 (467)
T PRK09556 117 -----------SGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRK------RGRFLGFWNISHNLGGAGAGGVAL 179 (467)
T ss_pred -----------cccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccc------eeeeEEeeecccchhhhHHHHHHH
Confidence 001167889999999999999999999999999999988 999999999999999999998887
Q ss_pred hccccc---cchhHhHHHHHHHHHHHHHHH
Q 008158 197 YIQDSV---SWVIGFGIPTVLMIGAIILFL 223 (575)
Q Consensus 197 ~l~~~~---gw~~~f~~~~~~~~i~~~~~~ 223 (575)
++.+.. +||..|.+.++..++..++.+
T Consensus 180 ~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~ 209 (467)
T PRK09556 180 WGANYFFDGHVIGMFIFPSIIALIIGFIGL 209 (467)
T ss_pred HHHHhhccCcchhHHHHHHHHHHHHHHHHH
Confidence 665532 699888876665544444333
No 25
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.92 E-value=6.5e-23 Score=218.41 Aligned_cols=177 Identities=11% Similarity=0.008 Sum_probs=147.7
Q ss_pred CCCcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHH
Q 008158 13 PGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASI 92 (575)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~ 92 (575)
+.+|+....+.+..+++.+... ...+..+.+++++|++.++.+++.+++.++..+++++.|+++||+ |||+++..+.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~ 81 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRI-NIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAII-GARRWIAGIMV 81 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhh-hHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-ChHHHHHHHHH
Confidence 3456666655555555555433 344555689999999999999999999999999999999999995 99999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccc
Q 008158 93 AAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKG 172 (575)
Q Consensus 93 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 172 (575)
++.++++.+++++ +.+.+++.|++.|++.++..|....++.|++|+++
T Consensus 82 ~~~~~~~~~~~~~--------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------ 129 (412)
T TIGR02332 82 LWGIASTATMFAT--------------------------GPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYF------ 129 (412)
T ss_pred HHHHHHHHHHHhc--------------------------CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHH------
Confidence 9999999998875 56779999999999999999998899999999877
Q ss_pred hhhhhHHHHHHHHHHHHHHhhhhhhccc------cccchhHhHHHHHHHHHHHHHHH
Q 008158 173 INSFFNWYYTTFTVVILITQTVLVYIQD------SVSWVIGFGIPTVLMIGAIILFL 223 (575)
Q Consensus 173 r~~~~~~~~~~~~ig~~~~~~v~~~l~~------~~gw~~~f~~~~~~~~i~~~~~~ 223 (575)
|++.+++++.+..+|..+++.+++++.+ ..|||+.|++.++..++..++.+
T Consensus 130 rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~ 186 (412)
T TIGR02332 130 RARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTW 186 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999988753 36999999987766554444333
No 26
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.92 E-value=1.3e-22 Score=214.86 Aligned_cols=149 Identities=12% Similarity=0.116 Sum_probs=130.5
Q ss_pred HHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 008158 37 LANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCD 116 (575)
Q Consensus 37 ~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 116 (575)
...+.+.+++++|+|.++.+++.+.+.++..+++++.|+++||+ |||+++..+..++.++++.+++++
T Consensus 28 ~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~-G~r~~l~~~~~l~~~~~~~~~~a~----------- 95 (393)
T PRK09705 28 VGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHV-SERRSVAISLLLIAVGALMRELYP----------- 95 (393)
T ss_pred cchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-CchHHHHHHHHHHHHHHHHHHHCc-----------
Confidence 44556678889999999999999999999999999999999995 999999999999999999999976
Q ss_pred CCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhh
Q 008158 117 VAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLV 196 (575)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~ 196 (575)
++..++++|+++|+|.+...+....++.|++| ++ |+++++.+..+.+.|..+++.+++
T Consensus 96 ---------------~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~------~~~~~g~~~~~~~~g~~~g~~~~~ 153 (393)
T PRK09705 96 ---------------QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QR------TPLVMGLWSAALMGGGGLGAAITP 153 (393)
T ss_pred ---------------chHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-cc------chhHHHHHHHHHHHHHHHHHHHHH
Confidence 56678999999999999999999999999886 55 899999999999999999999999
Q ss_pred hccccc-cchhHhHHHHHHHHHHH
Q 008158 197 YIQDSV-SWVIGFGIPTVLMIGAI 219 (575)
Q Consensus 197 ~l~~~~-gw~~~f~~~~~~~~i~~ 219 (575)
++.+.. +||+.+.+.++..++.+
T Consensus 154 ~l~~~~~~w~~~~~~~~~~~~~~~ 177 (393)
T PRK09705 154 WLVQHSETWYQTLAWWALPAVVAL 177 (393)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHH
Confidence 888764 89988876544444333
No 27
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.91 E-value=4.7e-23 Score=222.24 Aligned_cols=154 Identities=14% Similarity=0.094 Sum_probs=128.8
Q ss_pred HHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 008158 38 ANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDV 117 (575)
Q Consensus 38 ~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 117 (575)
....+.+.+++|++.++.+++.+.+.++..++.+++|+++||+ |||++++.+.++..++++.++++.
T Consensus 39 ~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~------------ 105 (455)
T TIGR00892 39 TVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRF-GCRPVVIAGGLLASLGMILASFSS------------ 105 (455)
T ss_pred hhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc-CchHHHHhhHHHHHHHHHHHHHhh------------
Confidence 3445667789999999999999999999999999999999995 999999999999999988888865
Q ss_pred CCCCCCccCCCcchhhHHHHH-HHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhh
Q 008158 118 AKPPFGQCKSANSMQLGVLVM-GLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLV 196 (575)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~l~~-~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~ 196 (575)
+.+.+++ .|++.|++.+...+...+++.++++ ++ |+++.++.+.+.++|..++|.+++
T Consensus 106 --------------~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~------r~~a~g~~~~~~~~g~~~~~~l~~ 164 (455)
T TIGR00892 106 --------------NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RR------RPLANGLAMAGSPVFLSTLAPLNQ 164 (455)
T ss_pred --------------hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hh------HHHHHHHHHhcccHHHHHHHHHHH
Confidence 4444544 5688999998776666778888885 45 999999999999999999999999
Q ss_pred hccccccchhHhHHHHHHHHHHHHHHHhc
Q 008158 197 YIQDSVSWVIGFGIPTVLMIGAIILFLVG 225 (575)
Q Consensus 197 ~l~~~~gw~~~f~~~~~~~~i~~~~~~~~ 225 (575)
++.+.+|||+.|++.+++.+++.+..++.
T Consensus 165 ~l~~~~gwr~~f~~~~~~~~~~~v~~~~~ 193 (455)
T TIGR00892 165 YLFESFGWRGSFLILGGLLLHCCVCGALM 193 (455)
T ss_pred HHHHHhChHHHHHHHHHHHHHHHHHHHHh
Confidence 99998999999998887666555444443
No 28
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.91 E-value=2.5e-22 Score=212.57 Aligned_cols=174 Identities=13% Similarity=0.209 Sum_probs=146.8
Q ss_pred cCCCcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHH
Q 008158 12 KPGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFAS 91 (575)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~ 91 (575)
.+..|+....+....++.....|.....++ .+.+++|+++++.++..+.+.++..++.++.|+++||+ |||+++..+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-grr~~~~~~~ 92 (394)
T PRK10213 15 TRPNWSAVFSVAFCVACLIIVEFLPVSLLT-PMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQAT-DRRYVVILFA 92 (394)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CcHHHHHHHH
Confidence 344666655555544444445454444444 46679999999999999999999999999999999995 9999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCccccc
Q 008158 92 IAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVK 171 (575)
Q Consensus 92 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 171 (575)
++..++.+.+.+++ +.+.+++.|+++|++.+...+...+++.|++|+++
T Consensus 93 ~~~~~~~~~~~~~~--------------------------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~----- 141 (394)
T PRK10213 93 VLLTLSCLLVSFAN--------------------------SFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRT----- 141 (394)
T ss_pred HHHHHHHHHHHHHC--------------------------hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhH-----
Confidence 99999998888764 67889999999999999999999999999999877
Q ss_pred chhhhhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHH
Q 008158 172 GINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAI 219 (575)
Q Consensus 172 ~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~ 219 (575)
|+++.++...+.++|..++|.+++++.+.+|||+.|++.+++.++..
T Consensus 142 -~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~ 188 (394)
T PRK10213 142 -VPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCI 188 (394)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998999999998776555443
No 29
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.91 E-value=1e-22 Score=215.17 Aligned_cols=176 Identities=15% Similarity=0.184 Sum_probs=152.3
Q ss_pred ccCCCcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHH
Q 008158 11 KKPGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFA 90 (575)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~ 90 (575)
.++.+|+......+.++.+.+..+.. ....+.+++++|+|..+.+++.+.+.++..++.++.|+++||+ |||+++..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~ 83 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLV-ALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRY-GRRLPMVTS 83 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHH
Confidence 56778888888888888888876544 5555677889999999999999999999999999999999995 999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccc
Q 008158 91 SIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGV 170 (575)
Q Consensus 91 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~ 170 (575)
.++..++.+.+++++ +.+.+++.|++.|++.+...+...+++.|.+|+++
T Consensus 84 ~~~~~~~~~~~~~~~--------------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~---- 133 (405)
T TIGR00891 84 IVLFSAGTLACGFAP--------------------------GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHL---- 133 (405)
T ss_pred HHHHHHHHHHHHHhc--------------------------cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhh----
Confidence 999999988888765 56778999999999999999999999999999877
Q ss_pred cchhhhhHHHHHHHHHHHHHHhhhhhhcccccc--chhHhHHHHHHHHHHHH
Q 008158 171 KGINSFFNWYYTTFTVVILITQTVLVYIQDSVS--WVIGFGIPTVLMIGAII 220 (575)
Q Consensus 171 ~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~g--w~~~f~~~~~~~~i~~~ 220 (575)
|+++.++.+.+.++|..+++.+++.+.+..+ ||+.|++.++..++.++
T Consensus 134 --~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~ 183 (405)
T TIGR00891 134 --RNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFALW 183 (405)
T ss_pred --hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988877665 99999876655444433
No 30
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.91 E-value=4.8e-23 Score=214.99 Aligned_cols=153 Identities=14% Similarity=0.119 Sum_probs=132.2
Q ss_pred HHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 008158 37 LANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCD 116 (575)
Q Consensus 37 ~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 116 (575)
...+.+++.+++|+|..+.+++.+.+.++..++.++.|+++||+ |||+++..+.++..++.+.+++++
T Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~-G~r~~~~~~~~~~~~~~~~~~~~~----------- 89 (377)
T TIGR00890 22 WTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKF-GPRAVAMLGGILYGLGFTFYAIAD----------- 89 (377)
T ss_pred hhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc-CccchhHHhHHHHHHHHHHHHHHH-----------
Confidence 45678889999999999999999999999999999999999995 999999999999999999988876
Q ss_pred CCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhh
Q 008158 117 VAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLV 196 (575)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~ 196 (575)
+.+.+++.|++.|++.+...+.......|++| ++ |+++.++...+.++|..+++.+.+
T Consensus 90 ---------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~g~~~~~~~~~ 147 (377)
T TIGR00890 90 ---------------SLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DK------RGLASGIIIGGYGLGSFILSPLIT 147 (377)
T ss_pred ---------------HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cc------cHHHHHHHHHhcchhHhHHHHHHH
Confidence 67789999999999999888888888888886 34 899999999999999887776777
Q ss_pred hccccccchhHhHHHHHHHHHHHHHHH
Q 008158 197 YIQDSVSWVIGFGIPTVLMIGAIILFL 223 (575)
Q Consensus 197 ~l~~~~gw~~~f~~~~~~~~i~~~~~~ 223 (575)
.+.+..|||+.|++.++..++..+..+
T Consensus 148 ~~~~~~~~~~~f~~~~~~~~~~~~~~~ 174 (377)
T TIGR00890 148 SVINLEGVPAAFIYMGIIFLLVIVLGA 174 (377)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 776778999999987776655554443
No 31
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.91 E-value=1.4e-22 Score=218.47 Aligned_cols=154 Identities=16% Similarity=0.079 Sum_probs=124.1
Q ss_pred HHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 008158 38 ANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDV 117 (575)
Q Consensus 38 ~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 117 (575)
....+|+.++ |+|.++.+++.+.+.++..++++++|+++||+ |||+++..+.++.+++.+.++++...
T Consensus 49 ~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~-g~k~~l~~~~~~~~i~~~~~~~~~~~---------- 116 (452)
T PRK11273 49 ALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAAVMLFMGFVPWA---------- 116 (452)
T ss_pred HHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-CCchhHHHHHHHHHHHHHHHHhhhcc----------
Confidence 4455688887 99999999999999999999999999999995 99999999999999998888775310
Q ss_pred CCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHH-HHhhhhh
Q 008158 118 AKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVIL-ITQTVLV 196 (575)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~-~~~~v~~ 196 (575)
..+...+++.|++.|++.+...+.....+.|++|+++ |++++++++.+.++|.. .+|.++.
T Consensus 117 ------------~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~l~~~ 178 (452)
T PRK11273 117 ------------TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKE------RGGIVSVWNCAHNVGGGLPPLLFLL 178 (452)
T ss_pred ------------cccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHH------HHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 1146678899999999999988888888999999877 99999999999999864 4555433
Q ss_pred hccccccchhHhHHHHHHHHHHHHH
Q 008158 197 YIQDSVSWVIGFGIPTVLMIGAIIL 221 (575)
Q Consensus 197 ~l~~~~gw~~~f~~~~~~~~i~~~~ 221 (575)
.+....+||+.|++.++..++..++
T Consensus 179 ~~~~~~gw~~~f~i~~~~~~~~~~l 203 (452)
T PRK11273 179 GMAWFNDWHAALYMPAFAAILVALF 203 (452)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHH
Confidence 3333359999999877655544333
No 32
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.91 E-value=1e-22 Score=217.64 Aligned_cols=167 Identities=13% Similarity=0.167 Sum_probs=145.2
Q ss_pred CCCcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHH
Q 008158 13 PGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASI 92 (575)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~ 92 (575)
+.+++.........+.+.+..+. ..+..+++++++|+|+.+.+++.+++.++..++.++.|+++||+ |||+++..+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~-g~r~~l~~~~~ 91 (426)
T PRK12307 14 RPQKNALFSAWLGYVFDGFDFML-IFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF-GRKPLMMWSIV 91 (426)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHH-HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHH
Confidence 34455555555666666666543 45666778899999999999999999999999999999999995 99999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccc
Q 008158 93 AAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKG 172 (575)
Q Consensus 93 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 172 (575)
+..++++.+++++ +.+.++++|++.|+|.+...+....++.|.+|+++
T Consensus 92 ~~~~~~~~~~~~~--------------------------~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~------ 139 (426)
T PRK12307 92 AYSVGTGLSGLAS--------------------------GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHL------ 139 (426)
T ss_pred HHHHHHHHHHHHh--------------------------HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhH------
Confidence 9999999988876 67789999999999999999999999999999877
Q ss_pred hhhhhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHH
Q 008158 173 INSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTV 213 (575)
Q Consensus 173 r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~ 213 (575)
|+++.++++.+..+|.++++.+.+++.+..+||+.|++.+.
T Consensus 140 r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~ 180 (426)
T PRK12307 140 KSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLL 180 (426)
T ss_pred hhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHH
Confidence 99999999999999999999999998888999999987544
No 33
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.91 E-value=1.1e-21 Score=213.60 Aligned_cols=176 Identities=15% Similarity=0.096 Sum_probs=133.6
Q ss_pred cchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhh-HHH-----HHHHHHHHHHHHhhhhHHHhhhcccchHHHHH
Q 008158 16 WKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTS-AAN-----ILNIWGGVTNFAPLLGAFISDTYIGRFKTITF 89 (575)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~-~~~-----i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~ 89 (575)
++......+..+++.+.+. ++.+..+++.++++.+.++ .++ +.++..++..+++++.|+++||+ |||+++..
T Consensus 15 ~~~~~~~~~g~~~~~~d~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~ 92 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFG-VYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKY-GRQKILAI 92 (490)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHH
Confidence 4455556677888877744 5677778999888654322 122 24666788899999999999995 99999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCccc
Q 008158 90 ASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEG 169 (575)
Q Consensus 90 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~ 169 (575)
+.+++.+++++++++++..++ +......+++.|+++|+|.|+..+....+++|++|+++
T Consensus 93 ~~~l~~i~~~~~a~~~~~~~~------------------g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~--- 151 (490)
T PRK10642 93 TIVIMSISTFCIGLIPSYATI------------------GIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRK--- 151 (490)
T ss_pred HHHHHHHHHHHHHhcccHHHH------------------HHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCC---
Confidence 999999999999987631110 00011248999999999999999999999999999877
Q ss_pred ccchhhhhHHHHHHHHHHHHHHhhhhhhcc--------ccccchhHhHHHHHHHHH
Q 008158 170 VKGINSFFNWYYTTFTVVILITQTVLVYIQ--------DSVSWVIGFGIPTVLMIG 217 (575)
Q Consensus 170 ~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~--------~~~gw~~~f~~~~~~~~i 217 (575)
|++..++...+..+|..+++.+...+. ..+|||+.|++.++..++
T Consensus 152 ---Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~ 204 (490)
T PRK10642 152 ---RGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGII 204 (490)
T ss_pred ---CcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH
Confidence 999999998888888888876554332 257999999987654443
No 34
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.91 E-value=5.6e-22 Score=216.68 Aligned_cols=189 Identities=14% Similarity=0.052 Sum_probs=141.2
Q ss_pred hcccccCCCcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhh-----hCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcc
Q 008158 7 QKDQKKPGGWKAMPYILGNETFERLATIGLLANFMVYLLKE-----YHMNQTSAANILNIWGGVTNFAPLLGAFISDTYI 81 (575)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-----l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~ 81 (575)
|+.+-.+.+++.........+++......+-...+ .+.++ .+.+..+.+++.+.+.++..++.+++|+++||+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~- 83 (502)
T TIGR00887 6 DTAPFGWQHFRAIVIAGVGFFTDSYDLFCISLVTK-MLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKL- 83 (502)
T ss_pred hccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-
Confidence 34334455556665566666666555433333333 34332 245566788999999999999999999999995
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccC
Q 008158 82 GRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQ 161 (575)
Q Consensus 82 Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~ 161 (575)
|||+++..+.++..++.++++++.+.. +..+...++++|+++|++.|+..+..+.+++|.
T Consensus 84 Grr~~~~~~~~~~~v~~~~~~~~~~~~--------------------~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~ 143 (502)
T TIGR00887 84 GRKRVYGMELIIMIIATVASGLSPGSS--------------------PKSVMATLCFWRFWLGVGIGGDYPLSAIITSEF 143 (502)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHccCcc--------------------cchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHh
Confidence 999999999999999998888753100 011357899999999999999999999999999
Q ss_pred CCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhhhccc-----------------------cccchhHhHHHHHHHHHH
Q 008158 162 FDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQD-----------------------SVSWVIGFGIPTVLMIGA 218 (575)
Q Consensus 162 ~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~-----------------------~~gw~~~f~~~~~~~~i~ 218 (575)
+|+++ |+++.++.+....+|..+++.++.++.. .++||+.|.+.++..++.
T Consensus 144 ~p~~~------Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~ 217 (502)
T TIGR00887 144 ATKKW------RGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLA 217 (502)
T ss_pred cChhh------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHH
Confidence 99988 9999999999999999999887664421 247999998777665555
Q ss_pred HHHHH
Q 008158 219 IILFL 223 (575)
Q Consensus 219 ~~~~~ 223 (575)
++..+
T Consensus 218 ~~~~~ 222 (502)
T TIGR00887 218 LYFRL 222 (502)
T ss_pred HHHHH
Confidence 44433
No 35
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.91 E-value=1.8e-22 Score=217.40 Aligned_cols=156 Identities=17% Similarity=0.274 Sum_probs=130.9
Q ss_pred HHHHHHhhhhCCC--------hhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 008158 39 NFMVYLLKEYHMN--------QTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQL 110 (575)
Q Consensus 39 ~l~~yl~~~l~~~--------~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~ 110 (575)
...+.+..+++++ ..+.+++.+++.++..++.++.|+++||+ |||++++.+.+++.++.+++....+
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-grr~~~~~~~~~~~~~~~~~~~~~~---- 123 (481)
T TIGR00879 49 GALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRF-GRKKSLLIIALLFVIGAILMGLAAF---- 123 (481)
T ss_pred hhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhh-hhHHHHHHHHHHHHHHHHHHHHhcc----
Confidence 3344455566655 89999999999999999999999999995 9999999999999999888876542
Q ss_pred CCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHH
Q 008158 111 HPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILI 190 (575)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~ 190 (575)
..+.+.++++|+++|+|.+...+...++++|.+|+++ |++++++++.+.++|..+
T Consensus 124 -------------------~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~~G~~~ 178 (481)
T TIGR00879 124 -------------------ALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKAL------RGALTSLYQLAITFGILV 178 (481)
T ss_pred -------------------ccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhh------hhhhhhHHHHHHHHHHHH
Confidence 1144578999999999999999999999999999887 999999999999999999
Q ss_pred Hhhhh---hhccccccchhHhHHHHHHHHHHHHHHHh
Q 008158 191 TQTVL---VYIQDSVSWVIGFGIPTVLMIGAIILFLV 224 (575)
Q Consensus 191 ~~~v~---~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 224 (575)
++.++ +...+..+||+.|++.++..++.++..++
T Consensus 179 ~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~ 215 (481)
T TIGR00879 179 AYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFF 215 (481)
T ss_pred HHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHHhc
Confidence 99998 77767789999999866655555444443
No 36
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.91 E-value=5.4e-22 Score=210.83 Aligned_cols=176 Identities=15% Similarity=0.109 Sum_probs=140.6
Q ss_pred CcchhHHHHHHHHHHHHHhh--hhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHH
Q 008158 15 GWKAMPYILGNETFERLATI--GLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASI 92 (575)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~--~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~ 92 (575)
+.+..+..++..+++...++ .+.....+.+.+++|.+..+.++..+.+.++..++.++.|+++||+ ||||++..+..
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~ 86 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI-GRRPVMLAGVA 86 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHH
Confidence 34444444444444443332 2223333456689999999999999999999999999999999995 99999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccc
Q 008158 93 AAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKG 172 (575)
Q Consensus 93 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 172 (575)
+..++.+....++ +.+.+++.|+++|++.+...+...+++.|.+|+++
T Consensus 87 ~~~~~~~~~~~~~--------------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------ 134 (406)
T PRK15402 87 FFILTCLAILLAQ--------------------------SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEAD------ 134 (406)
T ss_pred HHHHHHHHHHHHc--------------------------cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhH------
Confidence 9999888887765 56778899999999999888888999999999876
Q ss_pred hhhhhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHH
Q 008158 173 INSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFL 223 (575)
Q Consensus 173 r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~ 223 (575)
|.+..++.+....+|..++|.+++++.+..+||+.|++.+++.++..+..+
T Consensus 135 ~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~ 185 (406)
T PRK15402 135 AIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLW 185 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHH
Confidence 888889988888899999999999998888999999887766665555433
No 37
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.91 E-value=3.8e-22 Score=207.45 Aligned_cols=357 Identities=11% Similarity=0.021 Sum_probs=227.1
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHH
Q 008158 22 ILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTV 101 (575)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~ 101 (575)
++...++..++.......++.|.. +++.+..+.+++.+++.++..++.++.|+++||+ |||+++..+.++..++.++.
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~ 81 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVL-AGTGSASVLSLAALAGMLPYVVLSPIAGALADRY-DRKKVMIGADLIRAVLVAVL 81 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhh-chhHHHHHHHHHHHHHHHHH
Confidence 345566666665555556666655 6899999999999999999999999999999995 99999999999888888877
Q ss_pred HHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHH
Q 008158 102 TLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYY 181 (575)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 181 (575)
.++...+ ..+.+.+++.|++.|++.+...+...+++.|.+|+++ |++.+++.+
T Consensus 82 ~~~~~~~---------------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 134 (365)
T TIGR00900 82 PFVALLG---------------------GLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQ------LTQANSLSQ 134 (365)
T ss_pred HHHHHcC---------------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HHHHHhHHH
Confidence 7654211 1156778999999999999999999999999999877 999999999
Q ss_pred HHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhccceEEeeCCCCCcch-hHHHHHHHHHHhhcccCCCC
Q 008158 182 TTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFS-GIGQVLVAAYKKRRLTLPQG 260 (575)
Q Consensus 182 ~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 260 (575)
.+.++|..++|.+++++.+..|||+.|++.++..++..+..+..+++..++ +++++.. +..+
T Consensus 135 ~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---------------- 197 (365)
T TIGR00900 135 AVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAA-SEIQALSNAVLR---------------- 197 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCC-ccccccchhHHH----------------
Confidence 999999999999999998889999999887766555544443322211000 0000000 0000
Q ss_pred CCCCCccccCCCCcccccccCCCcchhhhhhhhhhhccCCCCCCCCCCCCccccchhhHHHhHhhhhhhHHH-HHHHHHH
Q 008158 261 QMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKCLIKIIPI-WAAGIIS 339 (575)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 339 (575)
+..+ .+ ......+.++..... +......
T Consensus 198 ---------------------------~~~~-------------------~~-----~~~~~~~~~~~~~~~~~~~~~~~ 226 (365)
T TIGR00900 198 ---------------------------DTRE-------------------GI-----KFVLKNPLLRTLLLLALLFNLVF 226 (365)
T ss_pred ---------------------------HHHh-------------------HH-----HHHHcCcHHHHHHHHHHHHHHHH
Confidence 0000 00 000000111111111 1111111
Q ss_pred HHhhccccceeeeecccccccCCCccc-cCccccccchhHhhHhhhhcccchhHHHhhhhhcCCCCCChHHHHHHHHHHH
Q 008158 340 LTSISQQGTFTVSQAMKMNRHLGPKFQ-IPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFS 418 (575)
Q Consensus 340 ~~~~~~~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~i~~~~~~~~~~~~~~r~~~r~~~~~~~~~i~ig~~~~ 418 (575)
........+.+ .....+ .+ ...+.+.....++.++...+..+ +.+|. ++++.+..+..+.
T Consensus 227 ~~~~~~~~~~~------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~-------~~~~~~~~~~~~~ 287 (365)
T TIGR00900 227 APAIVALFPYV------QSKYLG--RGSTHYGWVLAAFGLGALLGALLLGL----LGRYF-------KRMALMTGAIFVI 287 (365)
T ss_pred HHHHHHHhHHH------HHHHhC--CchHHHHHHHHHHHHHHHHHHHHHHH----HHHHh-------chhHHHHHHHHHH
Confidence 11110111111 111111 00 01112222333333333333222 24443 2334455555555
Q ss_pred HHHHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHHHHHHHHHHHHHHHHHH
Q 008158 419 ILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLS 498 (575)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~lg~~l~ 498 (575)
+++....... .. +.+...+..++.+++.+...+....+..|.+|++.|+++.|+.++...++..++
T Consensus 288 ~~~~~~~~~~-------------~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g 353 (365)
T TIGR00900 288 GLAILVVGLT-------------PP-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLG 353 (365)
T ss_pred HHHHHHHHhh-------------ch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555554432 11 355556677888999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhh
Q 008158 499 SLLITIVHGV 508 (575)
Q Consensus 499 ~~l~~~i~~~ 508 (575)
+.+.+.+.|.
T Consensus 354 ~~~~g~l~~~ 363 (365)
T TIGR00900 354 LILAGPLADH 363 (365)
T ss_pred HHHHHHHHHH
Confidence 9999988763
No 38
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.91 E-value=1.8e-22 Score=218.98 Aligned_cols=175 Identities=14% Similarity=0.073 Sum_probs=133.4
Q ss_pred CcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHH
Q 008158 15 GWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAA 94 (575)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~ 94 (575)
+++.+.......++.....+++ ..+.+++.+++|+|..+.+++.+.+.++..++.+++|+++||+ |||+++..+.++.
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-G~r~~~~~~~~~~ 111 (476)
T PLN00028 34 HMRAFHLSWISFFTCFVSTFAA-APLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLY-GPRYGSAFLLMLT 111 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHH
Confidence 3344444444555555544433 3445677889999999999999999999999999999999995 9999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchh
Q 008158 95 ILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGIN 174 (575)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 174 (575)
.++.++.+++. +...+++.|++.|++.+...+ ...+++|++|+++ |+
T Consensus 112 ~~~~~~~~~~~--------------------------s~~~l~~~r~l~G~~~~~~~~-~~~~i~~~~~~~~------rg 158 (476)
T PLN00028 112 APAVFCMSLVS--------------------------SATGFIAVRFFIGFSLATFVS-CQYWMSTMFNGKI------VG 158 (476)
T ss_pred HHHHHHHHHhc--------------------------CHHHHHHHHHHHHHHHHhhHH-HHHHHHHhcChhh------ee
Confidence 88888887765 556788899999999887544 4567899999877 99
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhhcc----c-----cccchhHhHHHHHHHHHHHHHHHh
Q 008158 175 SFFNWYYTTFTVVILITQTVLVYIQ----D-----SVSWVIGFGIPTVLMIGAIILFLV 224 (575)
Q Consensus 175 ~~~~~~~~~~~ig~~~~~~v~~~l~----~-----~~gw~~~f~~~~~~~~i~~~~~~~ 224 (575)
+++++.+...++|..+++.+.+.+. + ..|||+.|++.+++.++..++.++
T Consensus 159 ~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~ 217 (476)
T PLN00028 159 TANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLT 217 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 9999998877888877766655432 1 258999999877766555444433
No 39
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.91 E-value=1.8e-22 Score=219.28 Aligned_cols=389 Identities=13% Similarity=0.115 Sum_probs=236.1
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHH
Q 008158 21 YILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLT 100 (575)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~ 100 (575)
.+....++..+. ..+.....+++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++..+.+++.++.++
T Consensus 6 ~~~~~~~~~~~~-~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~ 83 (485)
T TIGR00711 6 VLMLGTFMAVLD-STIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF-GTRRLFLISTFAFTLGSLL 83 (485)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh-CcHHHHHHHHHHHHHHHHH
Confidence 333444444444 33555666778889999999999999999999999999999999995 9999999999999999999
Q ss_pred HHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHH
Q 008158 101 VTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWY 180 (575)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 180 (575)
++.++ +...++++|+++|++.+...+...+++.|.+|+++ |+++++++
T Consensus 84 ~~~~~--------------------------~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~ 131 (485)
T TIGR00711 84 CGVAP--------------------------NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEK------RGRAMAIW 131 (485)
T ss_pred HhCcC--------------------------CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHH------HHHHHHHH
Confidence 88765 56779999999999999999999999999999877 99999999
Q ss_pred HHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhccceEEeeCCCCCcchhHHHHHH--------HHHHh
Q 008158 181 YTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQVLV--------AAYKK 252 (575)
Q Consensus 181 ~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 252 (575)
+.+..+|..++|.+++++.+.++||+.|++.++..++.+++.++..++.++++ .+........+. ....+
T Consensus 132 ~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~~g~~l~~~~~~~~~~~~~~ 209 (485)
T TIGR00711 132 GLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAA--SENFDFLGLLLLSVGLGSLLYGLSE 209 (485)
T ss_pred HHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCccccc--cCCCcHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999877665555544443333211111 111111111000 00000
Q ss_pred hcccCCCCCCCCCccccCCCCcccccccCCCcchhhhhh-h-----hhhhccCCCCCCCCCCCCccccchhhHHHhHhhh
Q 008158 253 RRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLN-K-----AAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKCL 326 (575)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (575)
.+ + .. +... .+.....- . .....+. ....+..+++ ..++++..
T Consensus 210 ~~----~---~~----~~~~-----------~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-----~~~~~~~~ 258 (485)
T TIGR00711 210 GP----E---RG----WFDS-----------NEILILSITGLVAIIAFVVWEL----TDDNPLVDLR-----LFKYRNFT 258 (485)
T ss_pred CC----C---CC----CCCc-----------hHHHHHHHHHHHHHHHHHHHHH----cCCCCccCHH-----HHcCCChH
Confidence 00 0 00 0000 00000000 0 0000000 0000000100 00111111
Q ss_pred hhhHHHHHHHHHHHHhhccccceeeeecccccccCCCccc-cCccccccchhHhhHhhhhcccchhHHHhhhhhcCCCCC
Q 008158 327 IKIIPIWAAGIISLTSISQQGTFTVSQAMKMNRHLGPKFQ-IPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGI 405 (575)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~i~~~~~~~~~~~~~~r~~~r~~~~ 405 (575)
...+..+.....++......+. +.....+ ++ ...+.......++.++..++..+ +.+|.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~p~-------~~~~~~g--~s~~~~g~~~~~~~~~~~~~~~~~g~----l~~r~------- 318 (485)
T TIGR00711 259 IGCVYMSLLGLGLYGSFYLLPL-------YLQQVLG--YTALQAGLHILPVGLAPMLSSPIAGR----MGDKI------- 318 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-------HHHHhcC--CCHHHHHHHHHHHHHHHHHHHHHHHH----HHhhc-------
Confidence 1111111111111111111111 1111111 10 01122222333444444443222 24554
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHHHHH
Q 008158 406 TLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANS 485 (575)
Q Consensus 406 ~~~~~i~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g 485 (575)
++++.+.+|..+..++...+..... ...+.+..+...++.|+|.+...++......+..|++.+++++|
T Consensus 319 ~~~~~~~~g~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~ 387 (485)
T TIGR00711 319 DPRKLVTIGLILYAVGFYWRAFTFT-----------PDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSS 387 (485)
T ss_pred CcHHHHHHHHHHHHHHHHHHhccCC-----------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHH
Confidence 3345567777777777666542110 12345555666788899999988888888889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh
Q 008158 486 LLFCSFGFASYLSSLLITIVHG 507 (575)
Q Consensus 486 ~~~~~~~lg~~l~~~l~~~i~~ 507 (575)
+.++.+.+|+.+++.+.+.+.+
T Consensus 388 ~~~~~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 388 LSNFTRQLGGSIGTALITTILT 409 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998875
No 40
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.91 E-value=6.5e-22 Score=212.08 Aligned_cols=169 Identities=16% Similarity=0.184 Sum_probs=128.9
Q ss_pred HHHHHHHHHhhhhHHHHHHHHhhhhC---CChhhHHHHHHHH---HHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHH
Q 008158 24 GNETFERLATIGLLANFMVYLLKEYH---MNQTSAANILNIW---GGVTNFAPLLGAFISDTYIGRFKTITFASIAAILG 97 (575)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~~yl~~~l~---~~~~~~~~i~~~~---~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~ 97 (575)
...+++.+..+ ...++.+++.++++ .+..+.+.+..++ .++..++++++|+++||+ ||||++..+.+++.++
T Consensus 29 ~~~~~~~~d~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~-Grr~~l~~~~~~~~~~ 106 (432)
T PRK10406 29 SGNLVEWFDFY-VYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKH-GRKKSMLISVCMMCFG 106 (432)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHH
Confidence 45667766644 47778889999884 5555544444444 444559999999999995 9999999999999999
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhh
Q 008158 98 MLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFF 177 (575)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 177 (575)
++.++++++..+ .+......+++.|+++|+|.|+..+...++++|++|+++ |+++.
T Consensus 107 ~~~~~~~~~~~~------------------~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~------rg~~~ 162 (432)
T PRK10406 107 SLVIACLPGYET------------------IGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGR------KGFYA 162 (432)
T ss_pred HHHHhhcCCchh------------------HHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCc------ccHHH
Confidence 999988653111 001134568999999999999999999999999999877 99999
Q ss_pred HHHHHHHHHHHHHHhhhhhhcc--------ccccchhHhHHHHHHHHHH
Q 008158 178 NWYYTTFTVVILITQTVLVYIQ--------DSVSWVIGFGIPTVLMIGA 218 (575)
Q Consensus 178 ~~~~~~~~ig~~~~~~v~~~l~--------~~~gw~~~f~~~~~~~~i~ 218 (575)
++.+.+.+.|.++++.+...+. +.+|||+.|++.++..++.
T Consensus 163 ~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 163 SFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA 211 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH
Confidence 9988888888888876655443 2579999999877655443
No 41
>PRK03699 putative transporter; Provisional
Probab=99.90 E-value=1.8e-21 Score=206.09 Aligned_cols=176 Identities=12% Similarity=0.157 Sum_probs=144.3
Q ss_pred CCCcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHH
Q 008158 13 PGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASI 92 (575)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~ 92 (575)
.+++|..+...+..++.....+ ....+.+.+.+++|+|.++.+++.+.+.++..++.+++|+++||+ |||+++..+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-g~r~~~~~~~~ 80 (394)
T PRK03699 3 SNRIKLTWISFLSYALTGALVI-VTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEII-PLKRQLIFGFA 80 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHHH-HHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHH
Confidence 4556666666666666655544 344445557789999999999999999999999999999999995 99999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccc
Q 008158 93 AAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKG 172 (575)
Q Consensus 93 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 172 (575)
+..++.++.++++ +.+.+++.|++.|++.+...+...+++.|.+|+++
T Consensus 81 ~~~i~~~l~~~~~--------------------------~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~------ 128 (394)
T PRK03699 81 LMILAVAGLMFSH--------------------------SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQ------ 128 (394)
T ss_pred HHHHHHHHHHHcc--------------------------hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccch------
Confidence 9999988888764 66778999999999999999999999999998766
Q ss_pred hhhhhHHHHHHHHHHHHHHhhhhhhcc-ccccchhHhHHHHHHHHHHHHHH
Q 008158 173 INSFFNWYYTTFTVVILITQTVLVYIQ-DSVSWVIGFGIPTVLMIGAIILF 222 (575)
Q Consensus 173 r~~~~~~~~~~~~ig~~~~~~v~~~l~-~~~gw~~~f~~~~~~~~i~~~~~ 222 (575)
|+...+..+....+|..++|.+.+++. +..|||+.|.+.++..++..++.
T Consensus 129 r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~ 179 (394)
T PRK03699 129 RGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILT 179 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHH
Confidence 999999888888899999998888765 45799999987766555444433
No 42
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.90 E-value=1.2e-22 Score=210.23 Aligned_cols=166 Identities=18% Similarity=0.267 Sum_probs=143.6
Q ss_pred HHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHH
Q 008158 24 GNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTL 103 (575)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~ 103 (575)
...++..+........++.++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++..+.++..++.+...+
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~ 81 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRF-GRRRVLIIGLLLFALGSLLLAF 81 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCeeeEeehhhhhhhHHHHhhh
Confidence 445555566555555666589999999999999999999999999999999999995 9999999999999999666665
Q ss_pred HhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHH
Q 008158 104 TAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTT 183 (575)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 183 (575)
++ +.+.+++.|++.|++.+...+...+++.|.+|+++ |++.+++.+.+
T Consensus 82 ~~--------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~ 129 (352)
T PF07690_consen 82 AS--------------------------NFWLLLIARFLLGIGSGFFSPASNALIADWFPPEE------RGRAFGILSAG 129 (352)
T ss_dssp HC--------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCC------HHHHHHHHHHH
T ss_pred hh--------------------------hHHHHhhhccccccccccccccccccccccchhhh------hhhccccccch
Confidence 43 45589999999999999999999999999999977 99999999999
Q ss_pred HHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHH
Q 008158 184 FTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILF 222 (575)
Q Consensus 184 ~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~ 222 (575)
.++|..++|.+++++.+..+||+.|++.++..++..++.
T Consensus 130 ~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~ 168 (352)
T PF07690_consen 130 FSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILF 168 (352)
T ss_dssp HHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHH
T ss_pred hhhhhhcccchhhhhhhccccccccccccchhhhhhhhH
Confidence 999999999999999988999999999888777776643
No 43
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.90 E-value=6e-22 Score=207.48 Aligned_cols=168 Identities=14% Similarity=0.077 Sum_probs=134.3
Q ss_pred HHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHH-HHHHHHHHHHHHH
Q 008158 24 GNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITF-ASIAAILGMLTVT 102 (575)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~-~~~l~~~~~~~~~ 102 (575)
...++..++.....+.++.|+++++|.|..+.+++.+.+.+...+..++.|+++||+ ||||.++. +..+..++.++++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~ 82 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQ-GDRKGLILFCCLLAALACLLFA 82 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHHH
Confidence 456777777777888999999999999999999999999999999999999999995 99887654 4555556666666
Q ss_pred HHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhh--hhHHH
Q 008158 103 LTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINS--FFNWY 180 (575)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~--~~~~~ 180 (575)
+++ +.+.+++.|++.|.+.+...|...++..|..|+++ |++ ..++.
T Consensus 83 ~~~--------------------------~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~ 130 (375)
T TIGR00899 83 WNR--------------------------NYFLLLVLGVLLSSFASTANPQLFALAREHADRTG------REAVMFSSVM 130 (375)
T ss_pred hcc--------------------------hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcc------hhhHHHHHHH
Confidence 654 56667888988888878788887788888776544 443 36777
Q ss_pred HHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHh
Q 008158 181 YTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLV 224 (575)
Q Consensus 181 ~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 224 (575)
+...++|..++|.+++++.+..|||+.|++.+++.++..++.++
T Consensus 131 ~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 174 (375)
T TIGR00899 131 RAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWL 174 (375)
T ss_pred HHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 88889999999999999998899999999887765555554443
No 44
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.90 E-value=3.4e-23 Score=211.53 Aligned_cols=182 Identities=12% Similarity=0.148 Sum_probs=162.8
Q ss_pred cCCCcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHH
Q 008158 12 KPGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFAS 91 (575)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~ 91 (575)
.+..++....+.+.+.+++..-|.+.. ...-+++.+|.++++.|++...+.+.+.+..|+.|+++||| .||.++.+|.
T Consensus 28 ~~~~~~~l~il~~vnlmny~Dr~~iag-v~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadry-NR~~v~~vG~ 105 (493)
T KOG1330|consen 28 MKSPTLTLVILCLVNLMNYADRYTIAG-VLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRY-NRKRVIAVGI 105 (493)
T ss_pred cccchHHHHHHHHHHHHHHhhhhhhhh-hhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhc-CcceEEeeHH
Confidence 344556677777899999998887665 55667888999999999999999999999999999999997 9999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCccccc
Q 008158 92 IAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVK 171 (575)
Q Consensus 92 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 171 (575)
.++.++++.++++. +++++.+.|.+.|+|.+.+.|.++++++|.||+++
T Consensus 106 ~iW~~Av~~~~fs~--------------------------~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~----- 154 (493)
T KOG1330|consen 106 FIWTLAVFASGFSN--------------------------HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDK----- 154 (493)
T ss_pred HHHHHHHHHHHHHH--------------------------HHHHHHHHHHHhccchhhhcccchhHhhhcCcchh-----
Confidence 99999999999986 78899999999999999999999999999999988
Q ss_pred chhhhhHHHHHHHHHHHHHHhhhhhhcccccc-chhHhHHHHHHHHHHHHHHHhccc
Q 008158 172 GINSFFNWYYTTFTVVILITQTVLVYIQDSVS-WVIGFGIPTVLMIGAIILFLVGKK 227 (575)
Q Consensus 172 ~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~g-w~~~f~~~~~~~~i~~~~~~~~~~ 227 (575)
|++.++++|++.++|..+|.++++++....+ |||+|+..+++.++..++.++..+
T Consensus 155 -Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~ 210 (493)
T KOG1330|consen 155 -RSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVR 210 (493)
T ss_pred -hhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999987766 999999998887777766655444
No 45
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.90 E-value=1.6e-21 Score=204.95 Aligned_cols=175 Identities=13% Similarity=0.077 Sum_probs=145.2
Q ss_pred cchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHH
Q 008158 16 WKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAI 95 (575)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~ 95 (575)
.+.+..+.+..++..++... .....+++.+++|.|+++.+++.+++.++..++.++.|+++||+ |||+++..+.++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~ 81 (385)
T TIGR00710 4 KAFALLLGCLSILGPLGIDM-YLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRY-GRRPVLLLGLFIFA 81 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHH-hcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHHH
Confidence 34444444454555444333 33344567889999999999999999999999999999999995 99999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhh
Q 008158 96 LGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINS 175 (575)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 175 (575)
++.+....++ +.+.+++.|++.|++.+...+...+++.|.+|+++ |++
T Consensus 82 ~~~~~~~~~~--------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~ 129 (385)
T TIGR00710 82 LSSLGLALSN--------------------------NIETLLVLRFVQAFGASAGSVISQALVRDIYPGEE------LSR 129 (385)
T ss_pred HHHHHHHHHc--------------------------cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHH------HHH
Confidence 9988888765 56778999999999999999999999999999877 999
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHh
Q 008158 176 FFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLV 224 (575)
Q Consensus 176 ~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 224 (575)
.+++.+...++|..++|.+++++.+..+||+.|++.++..++..+..+.
T Consensus 130 ~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (385)
T TIGR00710 130 IYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFF 178 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988889999998877665555544443
No 46
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.90 E-value=5.4e-22 Score=214.73 Aligned_cols=148 Identities=11% Similarity=0.097 Sum_probs=129.7
Q ss_pred hhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccC
Q 008158 47 EYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCK 126 (575)
Q Consensus 47 ~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (575)
++|++..+.|.+.+.+.++..++.+++|+++||+ |||+++..+.++..++.+...++..
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~-------------------- 128 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKY-VFKWSIGIGMFLSSVISIVIPWAAG-------------------- 128 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHh-CcchhhHHHHHHHHHHHHHHHHHHH--------------------
Confidence 7899999999999999999999999999999995 9999999999998888877765431
Q ss_pred CCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhhhccccc-cch
Q 008158 127 SANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSV-SWV 205 (575)
Q Consensus 127 ~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~-gw~ 205 (575)
.+...+++.|+++|++.+...+....++.|++|+++ |+++.++.+.+.++|..+++.+++++.+.. |||
T Consensus 129 ----~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~ 198 (465)
T TIGR00894 129 ----GGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKE------RSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWP 198 (465)
T ss_pred ----cCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Confidence 135668999999999999999999999999999887 999999999999999999999999998874 999
Q ss_pred hHhHHHHHHHHHHHHHHHhc
Q 008158 206 IGFGIPTVLMIGAIILFLVG 225 (575)
Q Consensus 206 ~~f~~~~~~~~i~~~~~~~~ 225 (575)
+.|++.++..++..++++..
T Consensus 199 ~~f~i~~~~~~~~~~~~~~~ 218 (465)
T TIGR00894 199 MIFYVFGIVGCAWSLLWFVF 218 (465)
T ss_pred eehhhhhHHHHHHHHHHHHH
Confidence 99998877666555544443
No 47
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.90 E-value=3.7e-21 Score=204.24 Aligned_cols=172 Identities=9% Similarity=0.107 Sum_probs=140.5
Q ss_pred CCCcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHH
Q 008158 13 PGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASI 92 (575)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~ 92 (575)
-.-||.+....+.+++..++.+....++++++ +++|++.++.+++.+.+.++..++.++.|+++||+ ||||++..+.+
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~-g~k~~l~~~~~ 86 (402)
T TIGR00897 9 IGIPLNLLWGYIGVVVFMTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEII-GPLKTMMIGLL 86 (402)
T ss_pred cCCCchhhHHHHHHHHHHHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHH
Confidence 45567777777788888788777777888888 57899999999999999999999999999999995 99999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccc
Q 008158 93 AAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKG 172 (575)
Q Consensus 93 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 172 (575)
+..++++.+...... ..+...+++.|++.|+|.+...+...+.+.|.+|+++
T Consensus 87 ~~~~~~~~~~~~~~~----------------------~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~------ 138 (402)
T TIGR00897 87 LWCVGHAAFIVFGLG----------------------HANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDN------ 138 (402)
T ss_pred HHHHHHHHHHHHhcc----------------------CccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHH------
Confidence 998887665432100 0145667889999999988877777888889998877
Q ss_pred hhhhhHHHHHHHHHHH-HHHhhhhhhccccccchhHhHHHHHH
Q 008158 173 INSFFNWYYTTFTVVI-LITQTVLVYIQDSVSWVIGFGIPTVL 214 (575)
Q Consensus 173 r~~~~~~~~~~~~ig~-~~~~~v~~~l~~~~gw~~~f~~~~~~ 214 (575)
|+++.++++.+.++|. .++|.+++++.+..||+..++.....
T Consensus 139 ~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~ 181 (402)
T TIGR00897 139 LSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAF 181 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHH
Confidence 9999999999999996 58999999988888977666544433
No 48
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.90 E-value=1.1e-21 Score=213.84 Aligned_cols=168 Identities=15% Similarity=0.221 Sum_probs=144.8
Q ss_pred CCCcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHH
Q 008158 13 PGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASI 92 (575)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~ 92 (575)
+.+|+....+....++..+..+ ....+.+++.+++|++..+.+++.+.+.++..++.++.|+++||+ |||+++..+.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 93 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFV-LITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRY-GRRLAMVISIV 93 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHH
Confidence 4455655566666666666544 455566778889999999999999999999999999999999995 99999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccc
Q 008158 93 AAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKG 172 (575)
Q Consensus 93 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 172 (575)
+..++.+.++++. +.+.+++.|++.|++.++..+....++.|.+|+++
T Consensus 94 ~~~~~~~~~~~~~--------------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------ 141 (496)
T PRK03893 94 LFSVGTLACGFAP--------------------------GYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHL------ 141 (496)
T ss_pred HHHHHHHHHHHHh--------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------
Confidence 9999998888865 67789999999999999999999999999999877
Q ss_pred hhhhhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHH
Q 008158 173 INSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVL 214 (575)
Q Consensus 173 r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~ 214 (575)
|++.+++++.+.++|..++|.+.+++.+.++||+.|++.++.
T Consensus 142 r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~ 183 (496)
T PRK03893 142 RNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILP 183 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 999999999999999999999999999989999999875443
No 49
>TIGR00895 2A0115 benzoate transport.
Probab=99.90 E-value=8.6e-22 Score=207.28 Aligned_cols=176 Identities=10% Similarity=0.100 Sum_probs=145.2
Q ss_pred ccCCCcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHH
Q 008158 11 KKPGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFA 90 (575)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~ 90 (575)
.++..|+.....+...+...... .......+++.+++|++..+.+++.+.+.++..++.++.|+++||+ |||+++..+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~ 88 (398)
T TIGR00895 11 LSRYQWRAIILSFLIMLMDGYDL-AAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRI-GRKRVLLWS 88 (398)
T ss_pred CcchHHHHHHHHHHHHHHHHHHH-HHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh-hhHHHHHHH
Confidence 34444555555555555554443 3455666778889999999999999999999999999999999995 999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccc
Q 008158 91 SIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGV 170 (575)
Q Consensus 91 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~ 170 (575)
.++..++.++..++. +.+.+++.|++.|++.+...+...+++.|.+|+++
T Consensus 89 ~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---- 138 (398)
T TIGR00895 89 ILLFSVFTLLCALAT--------------------------NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRF---- 138 (398)
T ss_pred HHHHHHHHHHHHHcc--------------------------chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHh----
Confidence 999888888877654 56678899999999999999999999999999877
Q ss_pred cchhhhhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHH
Q 008158 171 KGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAII 220 (575)
Q Consensus 171 ~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~ 220 (575)
|++++++.+.+.++|..+++.+++++.+..||++.|++.++...+..+
T Consensus 139 --r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~ 186 (398)
T TIGR00895 139 --RGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLL 186 (398)
T ss_pred --hchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHH
Confidence 999999999999999999999999999889999999887544443333
No 50
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.90 E-value=1.8e-21 Score=205.12 Aligned_cols=169 Identities=14% Similarity=0.161 Sum_probs=141.2
Q ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHH
Q 008158 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGM 98 (575)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~ 98 (575)
.+.+....+......+...+ +.+.+++++|+|.++.+++.+.+.++..+++++.|+++||+ |||+++..+..+..++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~ 82 (382)
T PRK10091 5 ILSLALGTFGLGMAEFGIMG-VLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRY-SLKHILLFLVALCVIGN 82 (382)
T ss_pred HHHHHHHHHHHHhhHHHHHh-ChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHHHHHH
Confidence 33344444444444444444 44567789999999999999999999999999999999995 99999999999999999
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhH
Q 008158 99 LTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFN 178 (575)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 178 (575)
+++++++ +.+.+++.|++.|++.+...+....++.|.+|+++ |++.++
T Consensus 83 ~l~~~~~--------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 130 (382)
T PRK10091 83 AMFTLSS--------------------------SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGK------VTAAVA 130 (382)
T ss_pred HHHHHhC--------------------------cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHH------hhHHHH
Confidence 9988875 67889999999999999988888888899988766 899999
Q ss_pred HHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHH
Q 008158 179 WYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIIL 221 (575)
Q Consensus 179 ~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~ 221 (575)
.+..+..+|..++|.+++++.+..+||+.|++.++..++..+.
T Consensus 131 ~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~ 173 (382)
T PRK10091 131 GMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLAS 173 (382)
T ss_pred HHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988899999999877765544443
No 51
>PRK09952 shikimate transporter; Provisional
Probab=99.90 E-value=2.9e-21 Score=207.35 Aligned_cols=178 Identities=11% Similarity=0.103 Sum_probs=131.8
Q ss_pred CCCcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhh--CCChhhHHHHH-----HHHHHHHHHHhhhhHHHhhhcccchH
Q 008158 13 PGGWKAMPYILGNETFERLATIGLLANFMVYLLKEY--HMNQTSAANIL-----NIWGGVTNFAPLLGAFISDTYIGRFK 85 (575)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l--~~~~~~~~~i~-----~~~~~~~~~~~~~~G~laD~~~Grr~ 85 (575)
+.++|.........++|...........+.++.+++ +.++. .+++. ++..++..++.++.|+++||+ |||+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~-Grr~ 95 (438)
T PRK09952 18 SRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRL-GRKR 95 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhh-ccHH
Confidence 344566666666777777776544444455666665 66665 45443 233455668888899999995 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCC
Q 008158 86 TITFASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDAT 165 (575)
Q Consensus 86 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~ 165 (575)
++..+.+++.+++++++++++.++. .......+++.|+++|++.|+..+....++.|.+|++
T Consensus 96 ~l~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~ 157 (438)
T PRK09952 96 MLMLTVWMMGIATALIGLLPSFSTI------------------GWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKN 157 (438)
T ss_pred HHHHHHHHHHHHHHHHhcCCcHHHH------------------HHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCC
Confidence 9999999999999999987531110 0011235888999999999999999999999999987
Q ss_pred CcccccchhhhhHHHHHHHHHHHHHHhhhhhhcc--------ccccchhHhHHHHHHHH
Q 008158 166 TDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQ--------DSVSWVIGFGIPTVLMI 216 (575)
Q Consensus 166 ~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~--------~~~gw~~~f~~~~~~~~ 216 (575)
+ |+...+..+.+..+|..++..+..++. +.+|||+.|++.++..+
T Consensus 158 ~------rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l 210 (438)
T PRK09952 158 K------KAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVL 210 (438)
T ss_pred C------CcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHH
Confidence 7 999999988888899888877666553 25799999998776543
No 52
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.90 E-value=3.1e-21 Score=199.01 Aligned_cols=345 Identities=16% Similarity=0.219 Sum_probs=248.3
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHH
Q 008158 22 ILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTV 101 (575)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~ 101 (575)
+....++.....+.....++.|. +++|.+..+.+++.+...++..++.++.|+++||+ |||+.+..+.++..++.+..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~-g~r~~~~~~~~~~~~~~~~~ 81 (352)
T cd06174 4 LFLGFFLSGLDRGLLSPALPLLA-EDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRF-GRRRVLLLGLLLFALGSLLL 81 (352)
T ss_pred HHHHHHHHHHhhhhhHhhHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CCchhhHHHHHHHHHHHHHH
Confidence 34556666677666666666665 56799999999999999999999999999999995 99999999999999999888
Q ss_pred HHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHH
Q 008158 102 TLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYY 181 (575)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 181 (575)
...+ +.+.+++.|++.|++.+...+...++..|.+|+++ |++.+++.+
T Consensus 82 ~~~~--------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 129 (352)
T cd06174 82 AFAS--------------------------SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKE------RGRALGLFS 129 (352)
T ss_pred HHhc--------------------------cHHHHHHHHHHHHcccccccHhHHHHHHHhCCccc------hhhhhhHHH
Confidence 8764 67789999999999999999999999999999877 999999999
Q ss_pred HHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhccceEEeeCCCCCcchhHHHHHHHHHHhhcccCCCCC
Q 008158 182 TTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQVLVAAYKKRRLTLPQGQ 261 (575)
Q Consensus 182 ~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (575)
...++|..++|.+++++.+..+|++.|++.++..++..+...+..+
T Consensus 130 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------- 175 (352)
T cd06174 130 AGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLLR---------------------------------- 175 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH----------------------------------
Confidence 9999999999999999998889999999877766655554433210
Q ss_pred CCCCccccCCCCcccccccCCCcchhhhhhhhhhhccCCCCCCCCCCCCccccchhhHHHhHhhhhhhHHH-HHHHHHHH
Q 008158 262 MDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKCLIKIIPI-WAAGIISL 340 (575)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 340 (575)
.++..... +.......
T Consensus 176 ---------------------------------------------------------------~~~~~~~~~~~~~~~~~ 192 (352)
T cd06174 176 ---------------------------------------------------------------LLLLLALAFFLLSFGYY 192 (352)
T ss_pred ---------------------------------------------------------------HHHHHHHHHHHHHhHHH
Confidence 00000000 00000111
Q ss_pred HhhccccceeeeecccccccCCCccccCccccccchhHhhHhhhhcccchhHHHhhhhhcCCCCCChHHHHHHHHHHHHH
Q 008158 341 TSISQQGTFTVSQAMKMNRHLGPKFQIPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSIL 420 (575)
Q Consensus 341 ~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~~~~~~r~~~r~~~~~~~~~i~ig~~~~~~ 420 (575)
......+...... . ... ....+.......++..+..++..+ +.+|.++|+ ..+.++..+..+
T Consensus 193 ~~~~~~~~~~~~~-~----~~~---~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~------~~~~~~~~~~~i 254 (352)
T cd06174 193 GLLTYLPLYLQEV-L----GLS---AAEAGLLLSLFGLGGILGALLGGL----LSDRLGRRR------LLLLIGLLLAAL 254 (352)
T ss_pred HHHHHHHHHHHHh-c----CCC---HHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHhhh------HHHHHHHHHHHH
Confidence 1111110110000 0 000 011122333444555555554333 367765542 056777777777
Q ss_pred HHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHHHHHHHHHHHHHHHHHHHH
Q 008158 421 SMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSL 500 (575)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~lg~~l~~~ 500 (575)
+.+..... .+.+...+..++.+++.+...+....++.|..|++.|++.+|+.++...++..+++.
T Consensus 255 ~~~~~~~~---------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 319 (352)
T cd06174 255 GLLLLALA---------------PSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPL 319 (352)
T ss_pred HHHHHHHh---------------ccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77666543 235566777888999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhcccCCCCCcccCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 008158 501 LITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFL 546 (575)
Q Consensus 501 l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~v~~i~~~ 546 (575)
+.+.+.+.. ++...+.+.+++.+++.+..+
T Consensus 320 i~g~l~~~~----------------~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 320 LAGLLLDTG----------------GYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHHHHhccc----------------CcchHHHHHHHHHHHHHHHhe
Confidence 999887632 335677777777777665544
No 53
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.90 E-value=4.1e-21 Score=204.61 Aligned_cols=149 Identities=13% Similarity=0.121 Sum_probs=131.6
Q ss_pred HHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCC
Q 008158 42 VYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDVAKPP 121 (575)
Q Consensus 42 ~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (575)
+.+.+++|.+..+.++..+++.++..++.++.|+++||+ |||++++.+..++.++++.+++++
T Consensus 40 ~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a~---------------- 102 (413)
T PRK15403 40 INVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRI-GRRPVLITGALIFTLACAATLFTT---------------- 102 (413)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHc-CchHHHHHHHHHHHHHHHHHHHcC----------------
Confidence 347789999999999999999999999999999999995 999999999999999999888865
Q ss_pred CCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhhhcccc
Q 008158 122 FGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDS 201 (575)
Q Consensus 122 ~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~ 201 (575)
+.+.++++|+++|++.+...+....++.|.+|+++ |++.+++++...++|..+||.+++++.+.
T Consensus 103 ----------~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~lg~~l~~~ 166 (413)
T PRK15403 103 ----------SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTK------GIKLMAIITSIVLVAPIIGPLSGAALMHF 166 (413)
T ss_pred ----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 67789999999999988767777788899999877 89999999999999999999999999888
Q ss_pred ccchhHhHHHHHHHHHHHHHHH
Q 008158 202 VSWVIGFGIPTVLMIGAIILFL 223 (575)
Q Consensus 202 ~gw~~~f~~~~~~~~i~~~~~~ 223 (575)
.|||+.|++.++..+++.+..+
T Consensus 167 ~gw~~~f~~~~~~~~i~~~~~~ 188 (413)
T PRK15403 167 VHWKVLFAIIAVMGLIAFVGLL 188 (413)
T ss_pred cCHHHHHHHHHHHHHHHHHHHH
Confidence 8999999987776665554433
No 54
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.89 E-value=3e-21 Score=203.38 Aligned_cols=155 Identities=12% Similarity=0.059 Sum_probs=134.2
Q ss_pred chhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHH
Q 008158 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (575)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~ 96 (575)
|.++.+++..++..++...+.+.++.|++ ++|.|..+.|++.+.+.++..+++++.|+++||+ |||+++..+.++..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~-g~k~~~~~~~~~~~~ 83 (381)
T PRK03633 6 RPVLLLLCGLLLLTLAIAVLNTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRI-GFNRSYYLASLIFAA 83 (381)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 45677778888888876666677777666 6899999999999999999999999999999995 999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhh
Q 008158 97 GMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSF 176 (575)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 176 (575)
+...+++++ +.+.+++.|+++|++.++..+...+.+.|..++++ |++.
T Consensus 84 ~~~~~~~~~--------------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~ 131 (381)
T PRK03633 84 GCAGLGLMV--------------------------GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRN------RGRL 131 (381)
T ss_pred HHHHHHHhc--------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHH
Confidence 998888765 67788999999999999988887777888888766 9999
Q ss_pred hHHHHHHHHHHHHHHhhhhhhccccccch
Q 008158 177 FNWYYTTFTVVILITQTVLVYIQDSVSWV 205 (575)
Q Consensus 177 ~~~~~~~~~ig~~~~~~v~~~l~~~~gw~ 205 (575)
+++++.+.++|..+||.+++++.+...|.
T Consensus 132 ~~~~~~~~~~g~~~g~~~~~~l~~~~~~~ 160 (381)
T PRK03633 132 LAAYMMVYYLGTVLGQLLVSKVSTELMSV 160 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccch
Confidence 99999999999999999999987754333
No 55
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.89 E-value=5.1e-21 Score=202.48 Aligned_cols=174 Identities=14% Similarity=0.161 Sum_probs=144.2
Q ss_pred CCCcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHH
Q 008158 13 PGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASI 92 (575)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~ 92 (575)
++.+|....+....++..+... +.....+++.+++|+|+.+.+++.+.+.++..++.++.|+++||+ |||+++..+..
T Consensus 4 ~~~~~~l~~~~~~~~~~~~~~~-~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-grr~~~~~~~~ 81 (394)
T PRK11652 4 QRNVNLLFMLVLLVAVGQMAQT-IYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRV-GRRPVILVGMS 81 (394)
T ss_pred hhhHHHHHHHHHHHHHHHHHHH-HHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHH
Confidence 3466677766666666665544 333445567789999999999999999999999999999999995 99999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccc
Q 008158 93 AAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKG 172 (575)
Q Consensus 93 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 172 (575)
+..++.+....++ +.+.+++.|++.|++.+...+....+..|.+++++
T Consensus 82 ~~~~~~~~~~~~~--------------------------~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------ 129 (394)
T PRK11652 82 IFILGTLVALFAH--------------------------SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQ------ 129 (394)
T ss_pred HHHHHHHHHHHHc--------------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHH------
Confidence 9999888887754 56778999999999998887877888888888766
Q ss_pred hhhhhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHH
Q 008158 173 INSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAII 220 (575)
Q Consensus 173 r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~ 220 (575)
|+++.+++..+..+|..++|.+++++.+..|||+.|++.++..++..+
T Consensus 130 ~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~ 177 (394)
T PRK11652 130 LRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTF 177 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999998888999999987665544433
No 56
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.89 E-value=3.8e-22 Score=212.75 Aligned_cols=379 Identities=14% Similarity=0.153 Sum_probs=241.1
Q ss_pred hhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCcc
Q 008158 46 KEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQC 125 (575)
Q Consensus 46 ~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (575)
.++++|.++.+++.+.+..|..++++++|+++||+ |-|+++..+.++.++++++.+++..
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~-G~r~v~~~~~~~sa~~t~l~P~aa~------------------- 125 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKF-GARRVFFISGLISALLTLLTPLAAS------------------- 125 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHH-------------------
Confidence 36889999999999999999999999999999995 9999999999999999999999863
Q ss_pred CCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhhhcccc-ccc
Q 008158 126 KSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDS-VSW 204 (575)
Q Consensus 126 ~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~-~gw 204 (575)
.+.+.+++.|+++|++.|...|+...+.+.+.|++| |+++.++.+.+.++|.+++..++|++.+. .||
T Consensus 126 -----~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~E------rs~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW 194 (466)
T KOG2532|consen 126 -----IGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNE------RSTFIAILTAGSQLGTIITMPVSGLLCESSLGW 194 (466)
T ss_pred -----hcchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHH------HHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCC
Confidence 133468999999999999999999999999999999 99999999999999999999999999988 999
Q ss_pred hhHhHHHHHHHHHHHHHHHhccceEEeeCCCCCcchhHHHHHHHHHHhhcccCCCCCCCCCccccCCCCcccccccCCCc
Q 008158 205 VIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQVLVAAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLT 284 (575)
Q Consensus 205 ~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (575)
+.+|++.++..++..+++++...+.+.+++.-+. ++.....+.+..+..
T Consensus 195 ~sifY~~g~~g~i~~~~w~~~~~d~P~~h~~is~-----~El~~I~~~k~~~~~-------------------------- 243 (466)
T KOG2532|consen 195 PSIFYVFGIVGLIWFILWFLFYSDSPSKHPNISE-----KELKYIEKGKSEAHV-------------------------- 243 (466)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCH-----HHHHHHHhccccccc--------------------------
Confidence 9999999888877777776654433333222111 111111111110000
Q ss_pred chhhhhhhhhhhccCCCCCCCCCCCCccccchhhHHHhHhhhhhhHHHHHHHHHHHHhhccccceeeeecccccccCCCc
Q 008158 285 HQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKCLIKIIPIWAAGIISLTSISQQGTFTVSQAMKMNRHLGPK 364 (575)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~ 364 (575)
...+..|| +.+++..++++.-...+...........+.+.+++..+ +
T Consensus 244 --------------------~~~~~vP~-----------~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL--~ 290 (466)
T KOG2532|consen 244 --------------------KKKPPVPY-----------KAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVL--G 290 (466)
T ss_pred --------------------CCCCCCCH-----------HHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHh--C
Confidence 00023344 22333333333222222222222222233334444444 3
Q ss_pred ccc-CccccccchhHhhHhhhhcccchhHHHhhhhhcCCCCCChHHHH--HHHHHHHHHHHHHHHHhHhhhhcccccCCC
Q 008158 365 FQI-PPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRI--GIGMIFSILSMIVAGLVERGRRASAHLHPM 441 (575)
Q Consensus 365 ~~~-~~~~~~~i~~~~~~i~~~~~~~~~~~~~~r~~~r~~~~~~~~~i--~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (575)
+.+ ..+.+..+..+...+...+.+. +.||+.+|.......+++ .++....++.++.+++..
T Consensus 291 f~v~~~G~~salP~l~~~~~k~~~g~----lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~------------ 354 (466)
T KOG2532|consen 291 FDVRETGFLSALPFLAMAIVKFVAGQ----LSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTS------------ 354 (466)
T ss_pred CChhhhhHHHHHHHHHHHHHHHHHHH----HHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecC------------
Confidence 333 2344445555554444443333 367665542112223333 355555555555555442
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCC
Q 008158 442 SQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTND 521 (575)
Q Consensus 442 ~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~~~~ 521 (575)
..+.+..+. .+..+.+................-++..+..+|+.++...++.+++|.+.+.+... +...+|
T Consensus 355 -~~~~~~a~~-~l~~~~~~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~---~t~~eW---- 425 (466)
T KOG2532|consen 355 -DEHRLLAVI-LLTIAIGLSGFNISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTD---NTREEW---- 425 (466)
T ss_pred -CCcchHHHH-HHHHHHHHcccchhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCC---CCHHHH----
Confidence 112211111 12222222222222222222221467799999999999999999999999887631 123356
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHh
Q 008158 522 IDAGRLDYFYFLIAGLGGLNIVYFLYCAR 550 (575)
Q Consensus 522 ~~~~~~~~~f~~~a~i~~v~~i~~~~~~~ 550 (575)
..+|.+.+++.+++.++|.++..
T Consensus 426 ------~~VF~i~a~i~~~~~i~f~~f~s 448 (466)
T KOG2532|consen 426 ------RIVFLIAAGILIVGNIIFLFFGS 448 (466)
T ss_pred ------HHHHHHHHHHHHHhchheeEeec
Confidence 67899999999998888877753
No 57
>TIGR00898 2A0119 cation transport protein.
Probab=99.88 E-value=8.2e-21 Score=207.63 Aligned_cols=149 Identities=12% Similarity=0.151 Sum_probs=130.2
Q ss_pred HHHHhhhhCCC---hhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 008158 41 MVYLLKEYHMN---QTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDV 117 (575)
Q Consensus 41 ~~yl~~~l~~~---~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 117 (575)
.+.+.+++|++ ..+.+++.+++.++..++.++.|+++||+ |||+++..+.++..++.+..+++.
T Consensus 112 ~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~~~~~------------ 178 (505)
T TIGR00898 112 SSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRF-GRKKVLLLSTLVTAVSGVLTAFSP------------ 178 (505)
T ss_pred cccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhc-cchHHHHHHHHHHHHHHHHHHHcc------------
Confidence 34577899998 89999999999999999999999999995 999999999999999988888765
Q ss_pred CCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhhh
Q 008158 118 AKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVY 197 (575)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~ 197 (575)
+.+.+++.|++.|++.++..+....++.|.+|+++ |+.+.+++..+..+|.++++.++.+
T Consensus 179 --------------~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~ 238 (505)
T TIGR00898 179 --------------NYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQ------RAIVGTLIQVFFSLGLVLLPLVAYF 238 (505)
T ss_pred --------------cHHHHHHHHHHHHhhccchHHHHHHHhheecChhh------hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67789999999999999999999999999999877 9999999999999999999988776
Q ss_pred ccccccchhHhHHHHHHHHHHHHHHHhc
Q 008158 198 IQDSVSWVIGFGIPTVLMIGAIILFLVG 225 (575)
Q Consensus 198 l~~~~gw~~~f~~~~~~~~i~~~~~~~~ 225 (575)
+.+ ||+.|++.++..++..+..++.
T Consensus 239 ~~~---wr~~~~~~~i~~~~~~~~~~~~ 263 (505)
T TIGR00898 239 IPD---WRWLQLAVSLPTFLFFLLSWFV 263 (505)
T ss_pred hhH---HHHHHHHHHHHHHHHHHHHHhc
Confidence 654 9999998777666555555443
No 58
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.88 E-value=1.9e-20 Score=198.17 Aligned_cols=165 Identities=16% Similarity=0.203 Sum_probs=134.3
Q ss_pred hhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHH
Q 008158 18 AMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILG 97 (575)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~ 97 (575)
..+.++...++..++.......++. +.+++|.++.+.+++.+.+.+...++.+++|+++||+ ||||+++.+..++.++
T Consensus 4 ~f~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~-grr~vl~~~~~~~~~~ 81 (393)
T PRK11195 4 GFYAIMAAQFFSALADNALLFAAIA-LLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSF-PKGRVMFIANGIKLLG 81 (393)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhcc-CCchhhHHHHHHHHHH
Confidence 3445556666666654433344443 4678999999999999999999999999999999995 9999999999999988
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhh
Q 008158 98 MLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFF 177 (575)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 177 (575)
++.+..+. + .++.|+++|++.+...|+..+++.|++|+++ |+++.
T Consensus 82 ~~~~~~~~--------------------------~---~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~------~~~a~ 126 (393)
T PRK11195 82 CLLMLFGI--------------------------H---PLLAYGLVGIGAAAYSPAKYGILTELLPGEK------LVKAN 126 (393)
T ss_pred HHHHHHHH--------------------------H---HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHH
Confidence 88776643 2 2778999999999999999999999999877 99999
Q ss_pred HHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHH
Q 008158 178 NWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAII 220 (575)
Q Consensus 178 ~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~ 220 (575)
++.....++|..+||.++|++.+. .|+..+++.+.+.+++.+
T Consensus 127 ~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~~~ 168 (393)
T PRK11195 127 GWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLAAL 168 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999874 477777665544443433
No 59
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.88 E-value=1e-21 Score=205.19 Aligned_cols=154 Identities=18% Similarity=0.159 Sum_probs=135.2
Q ss_pred HHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 008158 37 LANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCD 116 (575)
Q Consensus 37 ~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 116 (575)
.....+++.+++|+|..+.+++.+++.++..++.++.|+++||+ |||+++..+.++..++.++.+++.
T Consensus 14 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~----------- 81 (379)
T TIGR00881 14 FALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS-NPRVFLPIGLILCAIVNLFFGFST----------- 81 (379)
T ss_pred hhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh-CCeehhHHHHHHHHHHHHHHHHhh-----------
Confidence 45556788899999999999999999999999999999999995 999999999999999999988865
Q ss_pred CCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHh-hhh
Q 008158 117 VAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQ-TVL 195 (575)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~-~v~ 195 (575)
+.+.+++.|++.|++.+...+...+++.|.+|+++ |++++++.+.+.++|..++| .++
T Consensus 82 ---------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~ 140 (379)
T TIGR00881 82 ---------------SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSE------RGTWVSFWNCSHNVGGGLLPPLVL 140 (379)
T ss_pred ---------------hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhh------heeeEeehhccchhHHHHHHHHHH
Confidence 66779999999999999999999999999999877 99999999999999999999 577
Q ss_pred hhccccccchhHhHHHHHHHHHHHHHHH
Q 008158 196 VYIQDSVSWVIGFGIPTVLMIGAIILFL 223 (575)
Q Consensus 196 ~~l~~~~gw~~~f~~~~~~~~i~~~~~~ 223 (575)
+.+.+..+||+.|++.+++.++..++.+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (379)
T TIGR00881 141 FGIAELYSWHWVFIVPGIIAIIVSLICF 168 (379)
T ss_pred HHHHhcCCchhHHHHHHHHHHHHHHHHh
Confidence 7777778999999887765555444433
No 60
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.88 E-value=1.8e-21 Score=197.18 Aligned_cols=177 Identities=12% Similarity=0.048 Sum_probs=155.2
Q ss_pred chhHHHHHHHHHHHHHhhhhHH---HHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHH
Q 008158 17 KAMPYILGNETFERLATIGLLA---NFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIA 93 (575)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~---~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l 93 (575)
|.-+.++...++.-.++|-+.- ...+++.++.++|.+|.|.+.+.+.+.+.++-.+.|.++||. +.|+.+-.++++
T Consensus 25 ~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~-npr~fm~~gLil 103 (448)
T COG2271 25 RWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRS-NPRYFMAFGLIL 103 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccC-CCceeehHHHHH
Confidence 4445666677777788887654 456899999999999999999999999999999999999995 999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccch
Q 008158 94 AILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGI 173 (575)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 173 (575)
..+..+++++++ ++..+.+...+.|..+|.-.|.....++.++|++| |
T Consensus 104 sai~nil~Gfs~--------------------------s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~e------R 151 (448)
T COG2271 104 SAIVNILFGFSP--------------------------SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKE------R 151 (448)
T ss_pred HHHHHHHHhhhh--------------------------HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccc------c
Confidence 999999999976 67778888899999999999999999999999998 9
Q ss_pred hhhhHHHHHHHHHHHHHHhhhh--hhccccccchhHhHHHHHHHHHHHHHHHhcc
Q 008158 174 NSFFNWYYTTFTVVILITQTVL--VYIQDSVSWVIGFGIPTVLMIGAIILFLVGK 226 (575)
Q Consensus 174 ~~~~~~~~~~~~ig~~~~~~v~--~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~ 226 (575)
|+..++.+.+-|+|+.+.|.+. +++..+.+||..|++++++.++..+..++..
T Consensus 152 G~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~ 206 (448)
T COG2271 152 GTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLL 206 (448)
T ss_pred CceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999 8998888999999999887665555444433
No 61
>PRK11043 putative transporter; Provisional
Probab=99.88 E-value=2.4e-20 Score=197.75 Aligned_cols=150 Identities=14% Similarity=0.149 Sum_probs=130.1
Q ss_pred HHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCC
Q 008158 42 VYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDVAKPP 121 (575)
Q Consensus 42 ~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (575)
+.+++++|.++++.+++.+++.++..++.+++|+++||+ |||+++..+..+..++.+.+.++.
T Consensus 30 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~---------------- 92 (401)
T PRK11043 30 KAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRY-GRKPVLLAGLSLFALGSLGMLWVE---------------- 92 (401)
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc-CCcHHHHHHHHHHHHHHHHHHHhc----------------
Confidence 347789999999999999999999999999999999995 999999999999988888887764
Q ss_pred CCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhhhcccc
Q 008158 122 FGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDS 201 (575)
Q Consensus 122 ~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~ 201 (575)
+.+.+++.|++.|++.+...+...+++.|.+|+++ +++.++......++|..++|.+++++.+.
T Consensus 93 ----------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~i~~~l~~~ 156 (401)
T PRK11043 93 ----------SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQK------ANRVFATIMPLVALSPALAPLLGAWLLNH 156 (401)
T ss_pred ----------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 56778999999999988877878888999998766 88888888888899999999999999988
Q ss_pred ccchhHhHHHHHHHHHHHHHHHh
Q 008158 202 VSWVIGFGIPTVLMIGAIILFLV 224 (575)
Q Consensus 202 ~gw~~~f~~~~~~~~i~~~~~~~ 224 (575)
.|||+.|++.++..++..+..+.
T Consensus 157 ~g~~~~~~~~~~~~~~~~~~~~~ 179 (401)
T PRK11043 157 FGWQAIFATLFAITLLLILPTLR 179 (401)
T ss_pred CChHHHHHHHHHHHHHHHHHHHH
Confidence 99999998877666555544433
No 62
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.88 E-value=1.2e-20 Score=201.63 Aligned_cols=391 Identities=10% Similarity=0.013 Sum_probs=220.2
Q ss_pred chhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHH
Q 008158 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (575)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~ 96 (575)
+..+.+....++...+++...++++.|+++++|+|..+.|.+.+++.++..+++++.|+++||+ |||++++++..+..+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~-g~r~~~~~~~~~~~~ 88 (420)
T PRK09528 10 PNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKL-GLKKHLLWIISGLLV 88 (420)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHH
Confidence 4555555567777777777899999999999999999999999999999999999999999995 999999887666554
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhh
Q 008158 97 GMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSF 176 (575)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 176 (575)
+..........+ . .......+..+.++..+...........++.++.. ++++..
T Consensus 89 ~~~~~~~~~~~~---------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~ 142 (420)
T PRK09528 89 LFGPFFIYVFAP---------------------L-LQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVS----RRSGFE 142 (420)
T ss_pred HHHHHHHHHHHH---------------------H-HHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHH----hhcccc
Confidence 433221110000 0 00001222223333333333332333333332111 225667
Q ss_pred hHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhccceEEeeCCCCCcchhHHHHHHHHHHhhccc
Q 008158 177 FNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQVLVAAYKKRRLT 256 (575)
Q Consensus 177 ~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (575)
++..+...++|..++|.+++++.+ .+|+..|++.++..++.+++.+..+++.+++ ++.+ +++
T Consensus 143 ~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------------~~~-- 204 (420)
T PRK09528 143 YGRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKPDAPST-AKVA--------------NAL-- 204 (420)
T ss_pred chhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccccccch-hhhc--------------cch--
Confidence 788888889999999999999876 5899999987776665555554433321110 0000 000
Q ss_pred CCCCCCCCCccccCCCCcccccccCCCcchhhhhhhhhhhccCCCCCCCCCCCCccccchhhHHHhHhhhhhhHHHHHHH
Q 008158 257 LPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKCLIKIIPIWAAG 336 (575)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (575)
.++ +. +....+... ..++ +.++.........
T Consensus 205 ~~~---~~---------------------~~~~~~~~~------------------------~l~~-~~~~~l~l~~~~~ 235 (420)
T PRK09528 205 GAN---AS---------------------AVSLKDALA------------------------LLKL-PKFWFLVLYVIGV 235 (420)
T ss_pred hcc---cc---------------------cccHHHHHH------------------------HccC-CCeEeehHHHHHH
Confidence 000 00 000000000 0000 1111111111111
Q ss_pred HHHHHhhc-cccceeeeecccccccCCCccccCccccccchhHhhHhhhhcccchhHHHhhhhhcCCCCCChHHHHHHHH
Q 008158 337 IISLTSIS-QQGTFTVSQAMKMNRHLGPKFQIPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGM 415 (575)
Q Consensus 337 ~~~~~~~~-~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~~~~~~r~~~r~~~~~~~~~i~ig~ 415 (575)
...+.... +.+.+.... ..+...+ . ...+.+..+..+...+..++. .++.||+++| +.+.++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~--~~~~~~~--~-~~~g~~~~~~~~~~~~~~~~~----g~l~dr~g~~-------~~~~~~~ 299 (420)
T PRK09528 236 ACFYDVFDQQFPNFFASF--FATPEQG--T-RVFGYLNSFQVFLEALIMFFA----PFIINRIGAK-------NALLLAG 299 (420)
T ss_pred HHHHHHHHHHHHHHHHHH--HhccCcc--h-HHHHHHHHHHHHHHHHHHHHH----HHHHHHhCcc-------hhhHHHH
Confidence 11111111 111111110 0011110 0 001222233333333433333 3347777655 3366666
Q ss_pred HHHHHHHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHHHHHH-HHHHHHHH
Q 008158 416 IFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSL-LFCSFGFA 494 (575)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g~-~~~~~~lg 494 (575)
++..++....+.. .+.+.++...++.+++.....+....++.+..|++.+++..+. +++...+|
T Consensus 300 ~l~~~~~~l~~~~---------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg 364 (420)
T PRK09528 300 TIMAVRIIGSGFA---------------TGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLG 364 (420)
T ss_pred HHHHHHHHHHHhc---------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHH
Confidence 6666666555533 2445556667778888888888888999999999999988766 66778899
Q ss_pred HHHHHHHHHHhhhhcccCCCCCcccCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 008158 495 SYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYC 548 (575)
Q Consensus 495 ~~l~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~v~~i~~~~~ 548 (575)
..+++.+.+++.|.. +++..|...+++.++..++.+..
T Consensus 365 ~~ig~~~~G~l~~~~----------------G~~~~f~~~~~~~~i~~~~~~~~ 402 (420)
T PRK09528 365 AVFLSTLAGNLYDSI----------------GFQGTYLILGGIVLLFTLISVFT 402 (420)
T ss_pred HHHHHHHHHHHHHhh----------------CchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998754 34567777777776665555544
No 63
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.88 E-value=3.9e-21 Score=206.40 Aligned_cols=156 Identities=13% Similarity=0.088 Sum_probs=127.9
Q ss_pred HHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 008158 38 ANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDV 117 (575)
Q Consensus 38 ~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 117 (575)
....+++++ +|+|+++.+++.+++.++..++.++.|+++||+ |||+++..+.++..++.+..++..+..
T Consensus 47 ~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 115 (438)
T TIGR00712 47 ALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILSAAVMLLMGFVPWAT--------- 115 (438)
T ss_pred HhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhcc-CCceehHHHHHHHHHHHHHHhcccccc---------
Confidence 344567775 599999999999999999999999999999995 999999999999888888776542110
Q ss_pred CCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhhh
Q 008158 118 AKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVY 197 (575)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~ 197 (575)
.+...+.+.|++.|++.+...+.....+.|++|+++ |++++++++.+.++|..+++.+.++
T Consensus 116 -------------~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~------rg~~~~~~~~~~~~g~~~~~~l~~~ 176 (438)
T TIGR00712 116 -------------SSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSE------RGTIVSIWNCAHNIGGGIPPLLVLL 176 (438)
T ss_pred -------------chHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCccc------chhHHHHHHHHHHhHhHHHHHHHHH
Confidence 145667888999999999998988999999999887 9999999999999999999887765
Q ss_pred c-cccccchhHhHHHHHHHHHHHHHHH
Q 008158 198 I-QDSVSWVIGFGIPTVLMIGAIILFL 223 (575)
Q Consensus 198 l-~~~~gw~~~f~~~~~~~~i~~~~~~ 223 (575)
. .+..+||+.|++.++..++..+..+
T Consensus 177 ~~~~~~~w~~~f~~~~~~~~i~~~~~~ 203 (438)
T TIGR00712 177 GMAWFNDWHAALYFPAICAIIVALFAF 203 (438)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 4 3446899999987776655444333
No 64
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.88 E-value=4.1e-20 Score=195.61 Aligned_cols=176 Identities=14% Similarity=0.112 Sum_probs=125.8
Q ss_pred cchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHH-HHHHHhhhhHHHhhhcccchHHHH-HHHHH
Q 008158 16 WKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGG-VTNFAPLLGAFISDTYIGRFKTIT-FASIA 93 (575)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~-~~~~~~~~~G~laD~~~Grr~~~~-~~~~l 93 (575)
.......++..++.+++.....+.++.|+.+++|.|.++.|++.+...+ +..+.++++|+ +||+ ||||.++ .+.++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~-g~r~~~~~~~~~~ 91 (393)
T PRK15011 14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKR-GDRKSLIVFCCLL 91 (393)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcc-cchhHHHHHHHHH
Confidence 3444555566888888888888999999999999999999999876655 55556666666 9995 9998754 55555
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHH-HHHHHhccCCccccccccccCCCCCCcccccc
Q 008158 94 AILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGL-GLLSIGTGGIRPCSIPFGVDQFDATTDEGVKG 172 (575)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 172 (575)
..++.++.+++. +.+.+++.+ ++.+.+ +...|....+..|..++++ +.
T Consensus 92 ~~~~~~~~~~~~--------------------------~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~ 140 (393)
T PRK15011 92 GVLACTLFAWNR--------------------------NYFVLLFVGVFLSSFG-STANPQMFALAREHADKTG----RE 140 (393)
T ss_pred HHHHHHHHHHhh--------------------------HHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHhhhcc----ch
Confidence 556666666654 445554444 444444 4566777777777665433 11
Q ss_pred hhhhhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHh
Q 008158 173 INSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLV 224 (575)
Q Consensus 173 r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 224 (575)
.+...++.+.+.++|..+||.+++++.+.+|||..|++.++..++..+..+.
T Consensus 141 ~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 192 (393)
T PRK15011 141 AVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWL 192 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHh
Confidence 2344578888999999999999999998899999999877665555544443
No 65
>PRK15075 citrate-proton symporter; Provisional
Probab=99.87 E-value=5.2e-20 Score=197.48 Aligned_cols=173 Identities=12% Similarity=0.110 Sum_probs=128.4
Q ss_pred CcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHH-HHHHHH-----HHHHhhhhHHHhhhcccchHHHH
Q 008158 15 GWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANIL-NIWGGV-----TNFAPLLGAFISDTYIGRFKTIT 88 (575)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~-~~~~~~-----~~~~~~~~G~laD~~~Grr~~~~ 88 (575)
+++.....+...+++.+... ...+..+++.++++.++.+.+.+. +....+ ..+++++.|+++||+ |||++++
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~ 90 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFF-LFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRV-GRRKGLI 90 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhh-chHHHHH
Confidence 34455555556666666543 456677788999999887765443 222222 235788999999995 9999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcc
Q 008158 89 FASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDE 168 (575)
Q Consensus 89 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~ 168 (575)
.+.+++.++++.++++++.+.+ +......++++|+++|++.+...+....+++|++|+++
T Consensus 91 ~~~~~~~~~~~l~~~~~~~~~~------------------~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~-- 150 (434)
T PRK15075 91 VTLSIMASGTLLIAFVPGYATI------------------GLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGR-- 150 (434)
T ss_pred HHHHHHHHHHHHHHhCCcHHHH------------------HHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCccc--
Confidence 9999999999999986531100 00001247899999999999999989999999999887
Q ss_pred cccchhhhhHHHHHHHHHHHHHHhhhhhhc--------cccccchhHhHHHHH
Q 008158 169 GVKGINSFFNWYYTTFTVVILITQTVLVYI--------QDSVSWVIGFGIPTV 213 (575)
Q Consensus 169 ~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l--------~~~~gw~~~f~~~~~ 213 (575)
|++..+++..+.++|..+++.+++.+ .+.+|||+.|++.++
T Consensus 151 ----rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 151 ----KGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred ----chHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 99999999988888888888777665 246899999987543
No 66
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.87 E-value=1.8e-19 Score=190.07 Aligned_cols=361 Identities=11% Similarity=0.023 Sum_probs=221.1
Q ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHH----HHHHHHH
Q 008158 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTI----TFASIAA 94 (575)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~----~~~~~l~ 94 (575)
...+....++...++-...++++.|+ +++|+|.++.|++.+++.+...+++++.|+++||+ ||++.. ..+..++
T Consensus 6 ~~~l~~~~~~~~~~~~~~~p~l~~~l-~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~l~ 83 (382)
T TIGR00902 6 FRWLALGFFGYFCAYGIFLPFFPAWL-KGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDA-NHIIIALRLLALASAIF 83 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHH
Confidence 33344455555555444556677777 47899999999999999999999999999999995 985433 2222222
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchh
Q 008158 95 ILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGIN 174 (575)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 174 (575)
.+ ..+..++ +.+.+++.|.+++.+.+...|...++..|. +++ |+
T Consensus 84 ~~--~~~~~~~--------------------------~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~------~~ 127 (382)
T TIGR00902 84 AA--AFSAGAH--------------------------NAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQ------FG 127 (382)
T ss_pred HH--HHHHhhh--------------------------hHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHH------cC
Confidence 22 1222222 577888999999999888888877776543 233 78
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhccceEEeeCCCCCcchhHHHHHHHHHHhhc
Q 008158 175 SFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQVLVAAYKKRR 254 (575)
Q Consensus 175 ~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (575)
+.++......++|..++|.+++++.+.+|||..|++......+.++. +..+++. +++++...
T Consensus 128 ~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~-------------- 189 (382)
T TIGR00902 128 LDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFMLIG-FLIKPTI---PPKDAIPE-------------- 189 (382)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHH-HHcCCCC---CCCccccc--------------
Confidence 89999999999999999999999999999999998765443322222 2222210 11100000
Q ss_pred ccCCCCCCCCCccccCCCCcccccccCCCcchhhhhhhhhhhccCCCCCCCCCCCCccccchhhHHHhHhhhhhhHHHHH
Q 008158 255 LTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKCLIKIIPIWA 334 (575)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (575)
.+ ... .+ ... +..++ ++++... .
T Consensus 190 ---~~---~~~------------------~~--~~~---------------------------~~l~~-~~~~~~l---~ 212 (382)
T TIGR00902 190 ---DE---SQG------------------DS--AFI---------------------------ALLKN-PMNLRFL---A 212 (382)
T ss_pred ---cc---ccc------------------ch--hHH---------------------------HHHcC-hHHHHHH---H
Confidence 00 000 00 000 00011 1111111 1
Q ss_pred HHHHHHHhhccccceeeeecccccccCCCccccCcccccc---chhHhhHhhhhcccchhHHHhhhhhcCCCCCChHHHH
Q 008158 335 AGIISLTSISQQGTFTVSQAMKMNRHLGPKFQIPPGTVGV---ISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRI 411 (575)
Q Consensus 335 ~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~~~i~~~~~~~~~~~~~~r~~~r~~~~~~~~~i 411 (575)
...+.+.......++.. .+.+. .+ .+...... +..+..++.. ...+|+.+| .+.++.+
T Consensus 213 ~~~l~~~~~~~~~~~~~---~~l~~-~g----~s~~~~g~l~~~~~~~~i~~~--------~~~~~l~~r---~g~~~~l 273 (382)
T TIGR00902 213 AVCLIQGAHAAYYGFSA---IYWQA-AG----ISASATGLLWGIGVLAEIIIF--------AFSNKLFQN---CSARDLL 273 (382)
T ss_pred HHHHHHHHHHHHHHHHH---HHHHH-CC----CCHhHHHHHHHHHHHHHHHHH--------HHhHHHHhh---CCHHHHH
Confidence 11111222222212111 11111 22 22222222 2233333322 235555544 2566778
Q ss_pred HHHHHHHHHHHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHHHHHHHH-HH
Q 008158 412 GIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLF-CS 490 (575)
Q Consensus 412 ~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g~~~-~~ 490 (575)
.++.+...+....+... .+.+.+++..++.++..+...+....++.+. |++.+++++++++ +.
T Consensus 274 ~~~~~~~~~~~~~~~~~---------------~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~ 337 (382)
T TIGR00902 274 LISAIACVGRWAIIGAI---------------EAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALA 337 (382)
T ss_pred HHHHHHHHHHHHHHHhH---------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHH
Confidence 88888888887766543 3556666677999999999999999999988 9999999999987 56
Q ss_pred HHHHHHHHHHHHHHhhhhcccCCCCCcccCCCCcchhHHHHHHHHHHHHHHHHH
Q 008158 491 FGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVY 544 (575)
Q Consensus 491 ~~lg~~l~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~v~~i~ 544 (575)
..+|..+++.+.|++.|.. +. ..|+..+++++++.+.
T Consensus 338 ~g~g~~~g~~~~G~l~~~~----------------g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 338 MGGLIAIFTAFAGFIYPTL----------------GA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHhc----------------cH-HHHHHHHHHHHHHHHH
Confidence 7799999999999998753 22 5577777777766433
No 67
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.87 E-value=7e-20 Score=193.62 Aligned_cols=151 Identities=14% Similarity=0.121 Sum_probs=132.1
Q ss_pred HHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 008158 39 NFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDVA 118 (575)
Q Consensus 39 ~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (575)
...+.+.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||++++.+.++..++.+.+..+.
T Consensus 24 ~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~i~~~~~~~~~------------- 89 (392)
T PRK10473 24 VGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRS-GRKPVAIPGAALFIIASLLCSLAE------------- 89 (392)
T ss_pred hhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHh-CChHHHHHHHHHHHHHHHHHHHhC-------------
Confidence 445566778999999999999999999999999999999995 999999999999999988887754
Q ss_pred CCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhhhc
Q 008158 119 KPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYI 198 (575)
Q Consensus 119 ~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l 198 (575)
+...+++.|+++|++.+...+...+++.|.+|+++ |+++.++.+...++|..++|.+++++
T Consensus 90 -------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~i~~~~~~~i~~~l 150 (392)
T PRK10473 90 -------------TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRR------RAKVLSLLNGITCIIPVLAPVLGHLI 150 (392)
T ss_pred -------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56678889999999999988889999999999877 99999999999999999999999988
Q ss_pred cccccchhHhHHHHHHHHHHHHHH
Q 008158 199 QDSVSWVIGFGIPTVLMIGAIILF 222 (575)
Q Consensus 199 ~~~~gw~~~f~~~~~~~~i~~~~~ 222 (575)
.+..+|++.|++.+++.++..++.
T Consensus 151 ~~~~g~~~~~~~~~~~~~i~~~~~ 174 (392)
T PRK10473 151 MLKFPWQSLFYTMAAMGILVLLLS 174 (392)
T ss_pred HhCcChHHHHHHHHHHHHHHHHHH
Confidence 888899999988776655554443
No 68
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.87 E-value=4.1e-20 Score=194.01 Aligned_cols=151 Identities=14% Similarity=0.142 Sum_probs=132.8
Q ss_pred HHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 008158 39 NFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDVA 118 (575)
Q Consensus 39 ~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (575)
...+.+.+++|+|..+.+++.+++.++..++.+++|+++||+ |||+++..+.++..++.+.+.++.
T Consensus 12 p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~i~~~~~~~~~------------- 77 (377)
T PRK11102 12 PALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSF-GRKPVILGGTLVFALAAVACALAQ------------- 77 (377)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhc-CChHHHHHHHHHHHHHHHHHHHHc-------------
Confidence 333444568999999999999999999999999999999995 999999999999999998888765
Q ss_pred CCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhhhc
Q 008158 119 KPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYI 198 (575)
Q Consensus 119 ~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l 198 (575)
+.+.+++.|++.|++.+...+...+++.|.+|+++ |++.+++.+....+|..++|.+++++
T Consensus 78 -------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~l 138 (377)
T PRK11102 78 -------------TIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEE------FSRMMSFVTLVMTIAPLLAPIIGGWL 138 (377)
T ss_pred -------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999999999999999999877 99999999999999999999999999
Q ss_pred cccccchhHhHHHHHHHHHHHHHH
Q 008158 199 QDSVSWVIGFGIPTVLMIGAIILF 222 (575)
Q Consensus 199 ~~~~gw~~~f~~~~~~~~i~~~~~ 222 (575)
.+..+||+.|++.++..++..+..
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~ 162 (377)
T PRK11102 139 LVWFSWHAIFWVLALAAILAAALV 162 (377)
T ss_pred HHHcChHHHHHHHHHHHHHHHHHH
Confidence 988899999988776655554443
No 69
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=99.86 E-value=1.6e-21 Score=204.89 Aligned_cols=363 Identities=36% Similarity=0.592 Sum_probs=226.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCC
Q 008158 84 FKTITFASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFD 163 (575)
Q Consensus 84 r~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~ 163 (575)
.|+++++.++..+|.+++.++...+.+ ++..+.+.++++..+.++|.|+++|+..++++|+++
T Consensus 1 yktI~~g~~~~~~G~~ll~l~~~~~~~-----------------~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~ 63 (372)
T PF00854_consen 1 YKTILLGSIVYLLGHVLLTLSAIPPSL-----------------PSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYD 63 (372)
T ss_dssp HHHHHHHHHHHHHHHHH--HHHTSSSC-----------------------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSS
T ss_pred CHhhhHHHHHHHHHHHHhHHHHhcchh-----------------hhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhc
Confidence 478899999999999998887643322 112245679999999999999999999999999999
Q ss_pred CCCcccccchhhhhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhccceEEee-CCCCCcchh-
Q 008158 164 ATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLV-EPEGSIFSG- 241 (575)
Q Consensus 164 ~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~- 241 (575)
+++ +.+|.++++++|++.|+|+++++.+.+++.+.+||.+.|.++++..+++++.++..++++... ++.+++..+
T Consensus 64 ~~~---~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~~~~~~~~~~~~ 140 (372)
T PF00854_consen 64 EDD---DSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRKVAPPGGSPLTNF 140 (372)
T ss_dssp TTT---TTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S-----S--S--
T ss_pred ccc---hhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcCcCccCCcccchh
Confidence 763 367999999999999999999999999999999999999999999999999999998887766 566666555
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCccccCCCCcccccccCCCcchhhhhhhhhhhccCCCCCCCCCCCCcccc-chhhHH
Q 008158 242 IGQVLVAAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRL-CSIQQV 320 (575)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 320 (575)
....+....+++....+. +.. . .+..... .............+...+.. .....|.. .+.+++
T Consensus 141 ~~~~~~~~~~~~~~~~~~---~~~-~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~ 204 (372)
T PF00854_consen 141 IKLVLVAAFKKRKLAVPK---GSS-W-LDWALFQ--YSERSIFGIIVFIRAAVIFF---------PEIFFWALFCQVQRV 204 (372)
T ss_dssp SHHHHHHHHHHHCCCH-H---HHH-H-HHHHHHH--HCCCCCCCCCCHHHHHHHHC---------CCHHHHTTTSSTTTH
T ss_pred HHHHHHHHHHHhhccccc---chH-H-HHHhhhh--hhhhhhhhhhhhccchhhhh---------hhhhhcccCCcccee
Confidence 333334444443332211 000 0 0000000 00000000000000000000 00011111 233455
Q ss_pred HhHhhhhhhHHHHHHHHHHHHhhccccceeeeecccccccCCCc-cccCccccccchhHhhHhhhhcccchhHHHhhhhh
Q 008158 321 EEVKCLIKIIPIWAAGIISLTSISQQGTFTVSQAMKMNRHLGPK-FQIPPGTVGVISMITIGLWLPFYDTVLVPALRKIT 399 (575)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~i~~~~~~~~~~~~~~r~~ 399 (575)
++.|.+.+.++.+.....++....+..+....+...++...+ + ++++++.+++++.+.++++.|++|++.+|+.++
T Consensus 205 ~~~k~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ip~~~l~~~n~i~iii~~pi~~~~~~p~~~~-- 281 (372)
T PF00854_consen 205 EELKALIRFLPIFLFWIFYWQMYSQLNTFFLLQVPQMDRGIG-GLFGIPPAWLQSFNPIFIIIFIPILDRVVYPLLRR-- 281 (372)
T ss_dssp HHCCHHHCHHHCCCHHHHHHHHCTCCHHHHHHCGGGTTT-SS-------SGGGTTHHHHHCHHHHHHHHHHCCCTTTT--
T ss_pred eeeeeeeeccccCeEEEEeeehhhhhhhHHHHhccccccccc-cccccccchhhhHHHHHHHHHHHHHHHHHhHHhhh--
Confidence 667777777777766667777777766666666666666666 5 889999999999999999999999998888882
Q ss_pred cCCCCCChHHHHHHHHHHHHHHHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchh
Q 008158 400 KHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHM 479 (575)
Q Consensus 400 ~r~~~~~~~~~i~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~ 479 (575)
++ ..+...++.+|++.+.++++.....+..+......++ ..+.++.++.+++..++|.+..+...+...|.+|++.
T Consensus 282 ~~--~~~~~~k~~~G~~~~~~~~~~~~~v~~~r~~~~~~~~--~~~~~~~~~~~~~~~~~e~~l~~~g~~~~~~~a~~~~ 357 (372)
T PF00854_consen 282 GI--QPSPPQKFGIGMVFAILAMFVAAIVEIRRLCYAQPCG--KVSPWWQVPMYIFWLIPEYFLSGTGESAAYEFAPSRA 357 (372)
T ss_dssp --------HHHHHHH-HHHHHHHHTTTHHHH---HH----T--T--THHHHHHHHHHHHHHHTTTTHHHHHHHHHTTTT-
T ss_pred cc--cchhhhhhhHHHHHHHHHHHHHHHHHhhhhhcccccC--CCChhhHHHHHHHHHHHHHHhhHHHHHHHHHhhHHhh
Confidence 22 2478889999999999999998887764443333332 2333566699999999999999998886666665555
Q ss_pred HHHHHHHHHH
Q 008158 480 KSIANSLLFC 489 (575)
Q Consensus 480 rg~~~g~~~~ 489 (575)
.+..+|+++.
T Consensus 358 p~~m~~~~~~ 367 (372)
T PF00854_consen 358 PSSMMGIWFA 367 (372)
T ss_dssp SSSSTHHHHH
T ss_pred hHHHHHHHHH
Confidence 5555555443
No 70
>PRK10133 L-fucose transporter; Provisional
Probab=99.86 E-value=2.2e-19 Score=192.56 Aligned_cols=135 Identities=13% Similarity=0.054 Sum_probs=113.4
Q ss_pred hhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 008158 34 IGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPP 113 (575)
Q Consensus 34 ~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 113 (575)
......+.+.+++++|.|+.+.+++.+.+.++..+++++.|++.||+ |||+++..+..++.++.+++..+..
T Consensus 42 ~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~-G~r~~l~~g~~~~~~~~~l~~~~~~------- 113 (438)
T PRK10133 42 NNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL-SYKAGIITGLFLYALGAALFWPAAE------- 113 (438)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHh-------
Confidence 34455566677999999999999999999999999999999999995 9999999999999999987642211
Q ss_pred CCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhh
Q 008158 114 KCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQT 193 (575)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~ 193 (575)
..+...++++|+++|+|.|...+..++++.|..|+++ |...++.......+|..+++.
T Consensus 114 ----------------a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~------~~~~~s~~~~~~~~G~~~g~~ 171 (438)
T PRK10133 114 ----------------IMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESS------GHFRLNLAQTFNSFGAIIAVV 171 (438)
T ss_pred ----------------cCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhh------HHHHHHHHHHHHHHHHHHHHH
Confidence 1167789999999999999999999999998765544 666788888888999999998
Q ss_pred hhhhc
Q 008158 194 VLVYI 198 (575)
Q Consensus 194 v~~~l 198 (575)
+++.+
T Consensus 172 ~g~~l 176 (438)
T PRK10133 172 FGQSL 176 (438)
T ss_pred HHHHH
Confidence 87654
No 71
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.86 E-value=5.6e-19 Score=191.63 Aligned_cols=386 Identities=13% Similarity=0.055 Sum_probs=247.5
Q ss_pred CCCcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHH
Q 008158 13 PGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASI 92 (575)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~ 92 (575)
+.+-|.+..+.+.+.+.+++...-..-++ .+..++.-|+...+++.....+...+..+++|.++||+ .|||+++.+-+
T Consensus 6 plr~~~Fr~lw~a~~iS~lG~~~~~va~~-wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~-drrrili~~~~ 83 (524)
T PF05977_consen 6 PLRNRNFRRLWIAQLISNLGDWMQTVALA-WLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRF-DRRRILILSQL 83 (524)
T ss_pred cccCchHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHHHH
Confidence 33445666666777777777553333333 44446677899999999999999999999999999995 99999999998
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccc
Q 008158 93 AAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKG 172 (575)
Q Consensus 93 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 172 (575)
+..+..+.+++..... ..+.+.+++..++.|++.+...|+.++++.|..|+++
T Consensus 84 ~~~~~~~~L~~l~~~~---------------------~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~------ 136 (524)
T PF05977_consen 84 LRALVALLLAVLAFFG---------------------LLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKED------ 136 (524)
T ss_pred HHHHHHHHHHHHHHhC---------------------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhh------
Confidence 8776666655433211 2267788888999999999999999999999999887
Q ss_pred hhhhhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhccceEEeeCCCCCcchhHHHHHHHHHHh
Q 008158 173 INSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQVLVAAYKK 252 (575)
Q Consensus 173 r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (575)
...+.++.....|+.-.+||.++|.+....|-.+.|.+.++..++.+++....+++. ++++.+.+...+.+...
T Consensus 137 L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~---~~~~~~~e~~~~~l~~G--- 210 (524)
T PF05977_consen 137 LPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPP---PPSSLPRERFFSALREG--- 210 (524)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc---cccccchhhhhhhHHHH---
Confidence 999999999999999999999999998888888999988877666555444333221 11111110000000000
Q ss_pred hcccCCCCCCCCCccccCCCCcccccccCCCcchhhhhhhhhhhccCCCCCCCCCCCCccccchhhHHHhHhhhhhhHHH
Q 008158 253 RRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKCLIKIIPI 332 (575)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (575)
+++.. ..+.+...+.
T Consensus 211 -----------------------------------------------------------~ryv~-----~~~~l~~~l~- 225 (524)
T PF05977_consen 211 -----------------------------------------------------------LRYVR-----SSPPLRSVLL- 225 (524)
T ss_pred -----------------------------------------------------------HHHHh-----cchHHHHHHH-
Confidence 00000 0011111110
Q ss_pred HHHHHHHHHhhccccceeeeecccccccCCCccccCccccccchhHhhHhhhhcccchhHHHhhhhhcCCCCCChHHHHH
Q 008158 333 WAAGIISLTSISQQGTFTVSQAMKMNRHLGPKFQIPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIG 412 (575)
Q Consensus 333 ~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~~~~~~r~~~r~~~~~~~~~i~ 412 (575)
....+.......... .+......++ +-....+.+....+++.++.+.+ ..++.+| .+..+.+.
T Consensus 226 --~~~~~~l~~~a~~aL---lPl~a~~~l~-~~a~~yGll~a~~gvGai~Gal~--------~~~l~~~---~~~~~lv~ 288 (524)
T PF05977_consen 226 --RSFLFNLFASAVWAL---LPLFARDVLG-GGASGYGLLLAAFGVGAILGALL--------LPRLRRR---LSSRRLVL 288 (524)
T ss_pred --HHHHHHHhhhHHHHh---hhHHHHHHhC-CcHHHHHHHHHHHHHHHHHHHHH--------HHHhhcc---cCcchhhH
Confidence 001111110000011 1111111221 00011122333344444444333 3333333 23445566
Q ss_pred HHHHHHHHHHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHHHHHHHHHHHH
Q 008158 413 IGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFG 492 (575)
Q Consensus 413 ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~ 492 (575)
.+.++.+++++.+++. .+.+...+..++.|.+.....+..++.+.+..|+++||+..+++++...
T Consensus 289 ~~~~~~a~~~~~lal~---------------~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~ 353 (524)
T PF05977_consen 289 LASLLFALALLLLALS---------------PSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFF 353 (524)
T ss_pred HHHHHHHHHHHHHhcc---------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHH
Confidence 7777777776666543 3556667778888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhcccCCCCCcccCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 008158 493 FASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFL 546 (575)
Q Consensus 493 lg~~l~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~v~~i~~~ 546 (575)
.+..+|..+.|.+.+.. +....+.+.++..+++.++.+
T Consensus 354 g~~~lGsll~G~la~~~----------------g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 354 GGMPLGSLLWGFLADHF----------------GVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHh----------------CHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988754 445566665555555544444
No 72
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.85 E-value=6e-19 Score=191.94 Aligned_cols=180 Identities=11% Similarity=0.083 Sum_probs=140.2
Q ss_pred cCCCcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcc-----cchHH
Q 008158 12 KPGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYI-----GRFKT 86 (575)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~-----Grr~~ 86 (575)
....+|....+++..+...+..+.....++.+++ +.|.+.++.+... ..... .++.+++|+++|| + ||||.
T Consensus 7 ~~~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~-~~g~~~~~ig~~~-~~~~~-~~~~~l~gpl~Dr-~~~~~~Grrr~ 82 (491)
T PRK11010 7 RIFQQPNSAILLILGFASGLPLALTSGTLQAWMT-VENIDLKTIGFFS-LVGQA-YVFKFLWSPLMDR-YTPPFLGRRRG 82 (491)
T ss_pred HHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHH-HHHHH-HHHHHHHHHHHHc-ccccCCCCchH
Confidence 4445666777777777777777767777777766 4588888888862 22333 2688999999999 7 99885
Q ss_pred -HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCC
Q 008158 87 -ITFASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDAT 165 (575)
Q Consensus 87 -~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~ 165 (575)
++.+.++..++...+++... ..+.+.+.+.+++.+++.+...+...++..|++|++
T Consensus 83 ~ll~~~i~~~~~~~~~a~~~~-----------------------~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~ 139 (491)
T PRK11010 83 WLLATQLLLLVAIAAMGFLEP-----------------------GTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAE 139 (491)
T ss_pred HHHHHHHHHHHHHHHHHHcCC-----------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh
Confidence 65777777777777766431 125777888999999999999999999999999987
Q ss_pred CcccccchhhhhHHHHHHHHHHHHHHhhhhhhccc-cccchhHhHHHHHHHHHHHHHHHh
Q 008158 166 TDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQD-SVSWVIGFGIPTVLMIGAIILFLV 224 (575)
Q Consensus 166 ~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~-~~gw~~~f~~~~~~~~i~~~~~~~ 224 (575)
+ |+++.++...+..+|..+++.+++++.+ ..|||..|++.++..++..+..++
T Consensus 140 ~------rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~ 193 (491)
T PRK11010 140 E------RGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLL 193 (491)
T ss_pred h------hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHh
Confidence 7 9999999999999999999999999988 579999999887766655544443
No 73
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.85 E-value=3.9e-19 Score=188.31 Aligned_cols=386 Identities=12% Similarity=0.038 Sum_probs=222.7
Q ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHH
Q 008158 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGM 98 (575)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~ 98 (575)
.+......++...++....++++.|+++++|++..+.+++.+.+.+...+++++.|+++||+ |||+.++.+.....++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~ 82 (396)
T TIGR00882 4 FWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKL-GLKKHLLWIISGLLVLF 82 (396)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHH
Confidence 44455567777777777888999999999999999999999999999999999999999995 99999988776665544
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhH
Q 008158 99 LTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFN 178 (575)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 178 (575)
.........+.+ .......+.+.+++.|++.+...+....+..|..++ ++..++
T Consensus 83 ~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--------~~~~~g 136 (396)
T TIGR00882 83 APFFIYVFGPLL------------------QSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSRN--------SNFEYG 136 (396)
T ss_pred HHHHHHHhhhHH------------------HHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhhh--------cccccc
Confidence 332211000000 000223356678888888888888877766554221 345667
Q ss_pred HHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhccceEEeeCCCCCcchhHHHHHHHHHHhhcccCC
Q 008158 179 WYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQVLVAAYKKRRLTLP 258 (575)
Q Consensus 179 ~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (575)
......++|..+||.+++.+.+ .+|+..|++.+++.++..++.+..+++. ++++... +. .+.+
T Consensus 137 ~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-----------~~-~~~~ 199 (396)
T TIGR00882 137 KARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKA----PSSATVA-----------NA-LGAN 199 (396)
T ss_pred hhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCC----chhhhhh-----------cc-cccc
Confidence 7777889999999999998865 6999999987766655544443322211 1100000 00 0000
Q ss_pred CCCCCCCccccCCCCcccccccCCCcchhhhhhhhhhhccCCCCCCCCCCCCccccchhhHHHhHhhhhhhHHHHHHHHH
Q 008158 259 QGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKCLIKIIPIWAAGII 338 (575)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (575)
. .. .+..+.. +..++ |.++..+........
T Consensus 200 ~---~~----------------------~~~~~~~------------------------~~l~~-~~~~~~~l~~~~~~~ 229 (396)
T TIGR00882 200 A---SA----------------------FSLKLAL------------------------ELFRQ-RKFWMFVLYVVGVAC 229 (396)
T ss_pred c---CC----------------------CCHHHHH------------------------HHHcC-CcHHHHHHHHHHHHH
Confidence 0 00 0000000 00001 111111111111111
Q ss_pred HHHhh-ccccceeeeecccccccCCCccccCccccccchhHhhHhhhhcccchhHHHhhhhhcCCCCCChHHHHHHHHHH
Q 008158 339 SLTSI-SQQGTFTVSQAMKMNRHLGPKFQIPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIF 417 (575)
Q Consensus 339 ~~~~~-~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~~~~~~r~~~r~~~~~~~~~i~ig~~~ 417 (575)
.+... .+.+.+..... .+...+ . ...+....+..+...+.... ..++.||.++| +.+.++.++
T Consensus 230 ~~~~~~~~~~~y~~~~~--~~~~~~--~-~~~g~~~~~~~i~~~~~~~~----~g~l~~r~g~~-------~~l~~~~~l 293 (396)
T TIGR00882 230 VYDVFDQQFANFFTSFF--ATPQQG--T-RVFGYVTTMGELLNALIMFC----APLIINRIGAK-------NALLIAGTI 293 (396)
T ss_pred HHHHHHHHHHHHHHHhc--cccccc--h-HHHHHHHHHHHHHHHHHHHH----HHHHHHHhccc-------hhHHHHHHH
Confidence 11111 11111111000 000010 0 00111222222233333232 23346666544 346666666
Q ss_pred HHHHHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHHHHHH-HHHHHHHHHH
Q 008158 418 SILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSL-LFCSFGFASY 496 (575)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g~-~~~~~~lg~~ 496 (575)
.+++....... .+.+.+++..++.+++.........++..+..|++.++++.+. .+....+|+.
T Consensus 294 ~~l~~~~~~~~---------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~ 358 (396)
T TIGR00882 294 MSVRIIGSSFA---------------TTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMI 358 (396)
T ss_pred HHHHHHHHHhc---------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHH
Confidence 66655544322 2444556667778888777777777888888999999887776 6688999999
Q ss_pred HHHHHHHHhhhhcccCCCCCcccCCCCcchhHHHHHHHHHHHHHHHHHH
Q 008158 497 LSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYF 545 (575)
Q Consensus 497 l~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~v~~i~~ 545 (575)
+++.+.+++.|.. ++...|.+.+++.++..+..
T Consensus 359 ~~~~l~G~l~~~~----------------G~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 359 FLSTLAGNMYDSI----------------GFQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred HHHHhHHHHHHhc----------------ccHHHHHHHHHHHHHHHHHH
Confidence 9999999998753 45677777777766654443
No 74
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.85 E-value=4.4e-19 Score=188.21 Aligned_cols=179 Identities=13% Similarity=0.044 Sum_probs=130.5
Q ss_pred chhHHHHHHHHHHHHHhhhhHHHHHHHHhh-hhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHH
Q 008158 17 KAMPYILGNETFERLATIGLLANFMVYLLK-EYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAI 95 (575)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~ 95 (575)
|.........+.....++ +...+.+.+.+ ++|+|.+|.+++.+++.+...++.++.|++.||+ |.|+++.++.++..
T Consensus 34 r~l~~s~~~f~~~F~~w~-~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~-G~R~v~~~~~ll~~ 111 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWM-LFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIF-GGRRWTVFSTAILI 111 (462)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHH
Confidence 434443333333333333 44555566654 8999999999999999999999999999999995 99999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhh
Q 008158 96 LGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINS 175 (575)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 175 (575)
+.++..+++...+ ..++..+++.|++.|++ ++..+.....+++++|+++ |++
T Consensus 112 i~~~~~~~a~~~~---------------------~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~------rG~ 163 (462)
T PRK15034 112 IPCVWLGIAVQNP---------------------NTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAK------QGS 163 (462)
T ss_pred HHHHHHHHHHccc---------------------CCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhH------hHH
Confidence 9999888752100 11678899999999998 6688889999999999887 999
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhcc-----c-------------cccchhHhHHHHHHHHHHHHHHHhc
Q 008158 176 FFNWYYTTFTVVILITQTVLVYIQ-----D-------------SVSWVIGFGIPTVLMIGAIILFLVG 225 (575)
Q Consensus 176 ~~~~~~~~~~ig~~~~~~v~~~l~-----~-------------~~gw~~~f~~~~~~~~i~~~~~~~~ 225 (575)
++++.....++|..+++.+...+. . ..+||.++++..+..++..++.++.
T Consensus 164 A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~ 231 (462)
T PRK15034 164 ALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSG 231 (462)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999997666777766555443321 1 3347777766666555555555543
No 75
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.84 E-value=5.4e-19 Score=211.92 Aligned_cols=156 Identities=12% Similarity=0.074 Sum_probs=124.7
Q ss_pred cchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCCh--hhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHH
Q 008158 16 WKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQ--TSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIA 93 (575)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~--~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l 93 (575)
.+.+...+...++..+...+....+..++...++.+. ...+++.+++.++..++++++|+++||+ |||++++.+.++
T Consensus 8 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-grk~~l~~~~~~ 86 (1146)
T PRK08633 8 IIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKF-SKNRVIRIVKLF 86 (1146)
T ss_pred hhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccc-cHHHHHHHHHHH
Confidence 3445555556666555555555666666766666654 4468889999999999999999999995 999999998887
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccch
Q 008158 94 AILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGI 173 (575)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 173 (575)
.+++.++..++.. ..+.+.+++.|++.|++.+...+...+++.|++|+++ |
T Consensus 87 ~~~~~~~~~~~~~-----------------------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r 137 (1146)
T PRK08633 87 EVGLTLLIVLAYY-----------------------LGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKEN------L 137 (1146)
T ss_pred HHHHHHHHHHHHH-----------------------HccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCccc------c
Confidence 7666655544321 1157789999999999999999999999999999877 9
Q ss_pred hhhhHHHHHHHHHHHHHHhhhhhhcccc
Q 008158 174 NSFFNWYYTTFTVVILITQTVLVYIQDS 201 (575)
Q Consensus 174 ~~~~~~~~~~~~ig~~~~~~v~~~l~~~ 201 (575)
+++++++..+.++|.++|+.+++++.+.
T Consensus 138 ~~~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 138 SRANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999998765
No 76
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.84 E-value=5.4e-19 Score=189.45 Aligned_cols=351 Identities=10% Similarity=0.084 Sum_probs=211.0
Q ss_pred HHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhc---ccchH-HHHHHHHHHHHHHHHHHHHhh
Q 008158 31 LATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTY---IGRFK-TITFASIAAILGMLTVTLTAW 106 (575)
Q Consensus 31 ~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~---~Grr~-~~~~~~~l~~~~~~~~~~~~~ 106 (575)
+....+.++++.|+.+++|+++.++|.+.++..+...+..|+.|+++||. +|||| .++.+..+..++.+.+....+
T Consensus 13 ~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~ 92 (437)
T TIGR00792 13 FIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPD 92 (437)
T ss_pred HHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCC
Confidence 33444567899999999999999999999999999999999999999983 48755 566777777777777765432
Q ss_pred cCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHH
Q 008158 107 LPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTV 186 (575)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i 186 (575)
.++ ......+++.+++.+++.+.......++..|..++.+ +|++..++...+.++
T Consensus 93 ~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~-----~R~~~~~~~~~~~~~ 147 (437)
T TIGR00792 93 FSA--------------------TGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPR-----ERESLSTFRRFGATL 147 (437)
T ss_pred CCc--------------------chHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHH-----HHHHHHHHHHHHHHH
Confidence 111 1135667778888899988888888888888875422 399999998888888
Q ss_pred HHHHHhhhhhhcc-------ccccchhHhHHHHHHHHHHHHHHHhccceEEeeCCCCCcchhHHHHHHHHHHhhcccCCC
Q 008158 187 VILITQTVLVYIQ-------DSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQVLVAAYKKRRLTLPQ 259 (575)
Q Consensus 187 g~~~~~~v~~~l~-------~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (575)
|..+++.+.+.+. +..+|++.+++.+++.++..++.+...++.+++.+.++ ..
T Consensus 148 g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~--------------------~~ 207 (437)
T TIGR00792 148 GGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKNI--------------------EK 207 (437)
T ss_pred HHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCccc--------------------cc
Confidence 8877766554443 34689999887777665555444333222110000000 00
Q ss_pred CCCCCCccccCCCCcccccccCCCcchhhhhhhhhhhccCCCCCCCCCCCCccccchhhHHHhHhhhhhhHHHHHHHHHH
Q 008158 260 GQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKCLIKIIPIWAAGIIS 339 (575)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (575)
+. +..+.. .+..++ |.+...+.........
T Consensus 208 ---~~-----------------------~~~~~~-----------------------~~l~~~-~~~~~~~~~~~~~~~~ 237 (437)
T TIGR00792 208 ---KL-----------------------SLKQIF-----------------------KALFKN-DQLLILCLAYLFYNLA 237 (437)
T ss_pred ---CC-----------------------CHHHHH-----------------------HHHhCC-HHHHHHHHHHHHHHHH
Confidence 00 000000 000001 1111111111111111
Q ss_pred HHhhccccceeeeecccccccCCCccccCccccccchhHhhHhhhhcccchhHHHhhhhhcCCCCCChHHHHHHHHHHHH
Q 008158 340 LTSISQQGTFTVSQAMKMNRHLGPKFQIPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSI 419 (575)
Q Consensus 340 ~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~~~~~~r~~~r~~~~~~~~~i~ig~~~~~ 419 (575)
+.........+.... .+ . ....+.+..+..++.++..++..+ +.+|+++| +.+.++..+..
T Consensus 238 ~~~~~~~~~~~~~~~------~~-~-~~~~~~~~~~~~i~~ii~~~~~~~----l~~r~g~~-------~~~~~~~~~~~ 298 (437)
T TIGR00792 238 FNIKNGVQVYYFTYV------LG-D-PELFSYMGSIAIVAGLIGVLLFPR----LVKKFGRK-------ILFAGGILLMV 298 (437)
T ss_pred HHHHcchhheeEeee------cC-C-hHHHHHHHHHHHHHHHHHHHHHHH----HHHHhCcH-------HHHHHHHHHHH
Confidence 111111111211111 11 0 000112223334444444444333 36665433 45666776666
Q ss_pred HHHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCC-------chhHHHHHHHHHHHHH
Q 008158 420 LSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFP-------DHMKSIANSLLFCSFG 492 (575)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p-------~~~rg~~~g~~~~~~~ 492 (575)
++.+..... +.+.+..++..++.+++.+...+..++.+.|..| ++.+|.+.|+.++...
T Consensus 299 ~~~~~~~~~--------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~ 364 (437)
T TIGR00792 299 LGYLIFFFA--------------GSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRK 364 (437)
T ss_pred HHHHHHHHc--------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHH
Confidence 666555432 1233444556677788888888888888888765 5678999999999999
Q ss_pred HHHHHHHHHHHHhhhhc
Q 008158 493 FASYLSSLLITIVHGVT 509 (575)
Q Consensus 493 lg~~l~~~l~~~i~~~~ 509 (575)
++..+++.+.+.+.+..
T Consensus 365 ~g~~lg~~i~g~ll~~~ 381 (437)
T TIGR00792 365 LGQALAGFLVGLILGII 381 (437)
T ss_pred HHHHHHHHHHHHHHHHc
Confidence 99999999999998765
No 77
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.84 E-value=1.2e-18 Score=185.77 Aligned_cols=390 Identities=13% Similarity=0.065 Sum_probs=216.6
Q ss_pred HHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccc-hHHHHHHHHHHHHHHHHHH
Q 008158 24 GNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGR-FKTITFASIAAILGMLTVT 102 (575)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr-r~~~~~~~~l~~~~~~~~~ 102 (575)
...++...++-...+++++|+++++|++..+.|++.+++.++..+++++.|+++||+ || |+++.++.++..+++.+..
T Consensus 9 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~-g~~r~~~~~~~~~~~~~~~~~~ 87 (418)
T TIGR00889 9 FMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKW-LSAQKVYAVCHFAGALLLFFAA 87 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHHHHH
Confidence 344444455444568999999999999999999999999999999999999999995 65 7788877777777777766
Q ss_pred HHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCC--CcccccchhhhhHHH
Q 008158 103 LTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDAT--TDEGVKGINSFFNWY 180 (575)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~ 180 (575)
+.+ +.+.+++.|++.|++.+...+...+...+...+. +..+...|.+.++
T Consensus 88 ~~~--------------------------~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G-- 139 (418)
T TIGR00889 88 QVT--------------------------TPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG-- 139 (418)
T ss_pred Hhc--------------------------CHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh--
Confidence 654 4566778888888887766665554432221100 0000012455554
Q ss_pred HHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhccceEEeeCCCCCcchhHHHHHHHHHHhhcccCCCC
Q 008158 181 YTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQVLVAAYKKRRLTLPQG 260 (575)
Q Consensus 181 ~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (575)
.+|..++|.+++.+.....|+ +|++.++..++..+..+.. ++.++ +++++..+. ++. ..
T Consensus 140 ----~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~~~~~-~e~~~--~~~~~~~~~--------~~~----~~- 198 (418)
T TIGR00889 140 ----TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVFALTL-PDIPV--AKSTAKMSI--------KVM----LG- 198 (418)
T ss_pred ----hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHHHhcC-CCCCC--CccccccCH--------HHH----hh-
Confidence 478888888888874433354 4555555444444333222 21110 000000000 000 00
Q ss_pred CCCCCccccCCCCcccccccCCCcchhhhhhhhhhhccCCCCCCCCCCCCccccchhhHHHhHhhhhhhHHH-HHHHHHH
Q 008158 261 QMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKCLIKIIPI-WAAGIIS 339 (575)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 339 (575)
.+.. +..++ ++++..+.. ++.....
T Consensus 199 -----------------------------~~~~------------------------~~~k~-~~~~~~~~~~~~~~~~~ 224 (418)
T TIGR00889 199 -----------------------------LDAF------------------------ILFKN-KRMAIFFFFSMLLGAPL 224 (418)
T ss_pred -----------------------------hhHH------------------------HHhcC-CCeeeHHHHHHHHHhHH
Confidence 0000 00000 111111111 1110101
Q ss_pred HHhhccccceeeeecccccccCCCcccc-CccccccchhHhhHhhhhcccchhHHHhhhhhcCCCCCChHHHHHHHHHHH
Q 008158 340 LTSISQQGTFTVSQAMKMNRHLGPKFQI-PPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFS 418 (575)
Q Consensus 340 ~~~~~~~~t~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~i~~~~~~~~~~~~~~r~~~r~~~~~~~~~i~ig~~~~ 418 (575)
.......+... . ....+.....++.. ..+....+..+..++...+ ...+.||+++ ++.+.++.++.
T Consensus 225 ~~~~~~~~~~~-~-~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~----~g~l~dr~g~-------r~~l~~~~~~~ 291 (418)
T TIGR00889 225 QITNIFGNGFL-H-EFGRNPEFADSFVVKNASIWMSLSQFSEIFFILT----IPFFLKRFGI-------KKVMLLSLVAW 291 (418)
T ss_pred HHHHHhHHHHH-H-HhcccccccchhhhhhHHHHHHHHHHHHHHHHHH----HHHHHHHhCc-------HHHHHHHHHHH
Confidence 01110000010 0 00000000000000 0112222333333333333 2333666543 35577777777
Q ss_pred HHHHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHHHHHHHH-HHHHHHHHH
Q 008158 419 ILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLF-CSFGFASYL 497 (575)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g~~~-~~~~lg~~l 497 (575)
.++...+..... ...+++.+++..++.+++++...+....++.+.+|++.|++++|+.+ ....+|..+
T Consensus 292 ~v~~~l~~~~~~-----------~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~i 360 (418)
T TIGR00889 292 ALRFGFFAYGDP-----------EYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLL 360 (418)
T ss_pred HHHHHHHHHcCc-----------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHH
Confidence 777655544210 01123445566788899999989999999999999999999999997 567899999
Q ss_pred HHHHHHHhhhhcccCCCCCcccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 008158 498 SSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCARR 551 (575)
Q Consensus 498 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~v~~i~~~~~~~~ 551 (575)
++.+.+++.+..+.... + +++..|.+.+++.+++.+.++++.++
T Consensus 361 Gp~l~G~l~~~~g~~~~--~--------~~~~~f~~~~~~~~i~~~l~~~~~~~ 404 (418)
T TIGR00889 361 GYILSGVMVEKMFAYGT--F--------DWQTMWLFFAGYIAILAVLFMIFFKY 404 (418)
T ss_pred HHHHHHHHHHHhccccC--C--------chHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999998875421110 1 35677888888888877777776653
No 78
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.84 E-value=1.9e-19 Score=187.95 Aligned_cols=158 Identities=13% Similarity=0.076 Sum_probs=128.8
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHH
Q 008158 20 PYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGML 99 (575)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~ 99 (575)
+......++....++...+.++.++++++|+|..+.+++.+++.++..++.++.|+++||+ |||+++..+.++..++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~i~~~ 82 (366)
T TIGR00886 4 FFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF-GPRYTTTLSLLLLAIPCL 82 (366)
T ss_pred HHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHH
Confidence 3344455555555565666666689999999999999999999999999999999999995 999999999999999998
Q ss_pred HHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHH
Q 008158 100 TVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNW 179 (575)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 179 (575)
.++++.. +.+.+++.|+++|++.+.. +...++++|++|+++ |++..++
T Consensus 83 ~~~~~~~-------------------------~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~------r~~~~~~ 130 (366)
T TIGR00886 83 WAGLAVQ-------------------------SYSVLLLLRLFIGIAGGSF-ASCMPWISFFFPKKI------QGTALGL 130 (366)
T ss_pred HHHHHhh-------------------------hHHHHHHHHHHHHHhchhh-HhHHHHHHHhcCHhh------hhHHHHH
Confidence 8887641 4566889999999996654 557889999999877 9999999
Q ss_pred HHHHHHHHHHHHhhhhhhccc----------cccchhHhHH
Q 008158 180 YYTTFTVVILITQTVLVYIQD----------SVSWVIGFGI 210 (575)
Q Consensus 180 ~~~~~~ig~~~~~~v~~~l~~----------~~gw~~~f~~ 210 (575)
+....++|..+++.+++.+.. ..+||+.|++
T Consensus 131 ~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~ 171 (366)
T TIGR00886 131 AAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVI 171 (366)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHH
Confidence 998888888888877765543 3489999943
No 79
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.83 E-value=6e-19 Score=211.31 Aligned_cols=149 Identities=12% Similarity=0.026 Sum_probs=113.0
Q ss_pred HHhhhhCCCh-hhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHH--HHHHHHHHHHHHhhcCCCCCCCCCCCC
Q 008158 43 YLLKEYHMNQ-TSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASI--AAILGMLTVTLTAWLPQLHPPKCDVAK 119 (575)
Q Consensus 43 yl~~~l~~~~-~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (575)
.+.+..+.+. ...++..+++.+...++.+++|+++||+ |||+++..... +.........+...
T Consensus 41 ~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~-~rk~~~~~~~~~~~~~~~~~~~~~~~~------------- 106 (1140)
T PRK06814 41 GLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKY-DKAKLAKILKFAEIGIAALAIYGFHLN------------- 106 (1140)
T ss_pred HhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhc-cHHHHHHHHHHHHHHHHHHHHHHHHHh-------------
Confidence 3343444433 3467778889999999999999999995 99997643222 22222222222211
Q ss_pred CCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhhhcc
Q 008158 120 PPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQ 199 (575)
Q Consensus 120 ~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~ 199 (575)
+.+.++++|+++|++.+...|+..+++.|++|+++ |++++++.+++.++|.++||.++|++.
T Consensus 107 ------------s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~------~~~a~~~~~~~~~ig~~igp~l~g~l~ 168 (1140)
T PRK06814 107 ------------SVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDE------LLGANALVEAGTFIAILLGTIIGGLAT 168 (1140)
T ss_pred ------------hHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccc------cchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 67889999999999999999999999999999877 999999999999999999999999999
Q ss_pred ccccchhHhHHHHHHHHHHHHHHH
Q 008158 200 DSVSWVIGFGIPTVLMIGAIILFL 223 (575)
Q Consensus 200 ~~~gw~~~f~~~~~~~~i~~~~~~ 223 (575)
+..+|++.|+..+++.++++++.+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~ 192 (1140)
T PRK06814 169 ISGNFVILVALLMGIAVLGWLASL 192 (1140)
T ss_pred hccccHHHHHHHHHHHHHHHHHHh
Confidence 989999998555554444444433
No 80
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.83 E-value=2.7e-18 Score=181.07 Aligned_cols=156 Identities=11% Similarity=-0.021 Sum_probs=115.7
Q ss_pred HHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccch----HHHHHHHHHHHHHHHHH
Q 008158 26 ETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRF----KTITFASIAAILGMLTV 101 (575)
Q Consensus 26 ~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr----~~~~~~~~l~~~~~~~~ 101 (575)
.++-..+...+.+.++.|++ ++|.|.++.|++.+.+.+...++.++.|+++||+ ||| +.+.++..+. + ...
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~-~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~--~-~~~ 87 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLK-GQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDP-SQLIPALRLLALLTLLF--A-VAF 87 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHH-hcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhh-cchHHHHHHHHHHHHHH--H-HHH
Confidence 33334444445667778885 6899999999999999999999999999999995 984 3332222111 1 111
Q ss_pred HHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHH
Q 008158 102 TLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYY 181 (575)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 181 (575)
.... .+.+.+++.|++.|++.+...|...++..|+. ++ |++.++...
T Consensus 88 ~~~~-------------------------~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~~--~~------~~~a~~~~~ 134 (382)
T PRK11128 88 WFGA-------------------------HSFWLLFVAIGLFNLFFSPLVPLTDALANTWQ--KQ------IGLDYGKVR 134 (382)
T ss_pred HHhc-------------------------ccHHHHHHHHHHHHHHHcccccHHHHHHHHHH--hh------ccCCcchHH
Confidence 1111 16777889999999999999998777777652 22 777888888
Q ss_pred HHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHH
Q 008158 182 TTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAI 219 (575)
Q Consensus 182 ~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~ 219 (575)
...++|..+||.+++++.+.+|||..|++.++..++..
T Consensus 135 ~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~ 172 (382)
T PRK11128 135 LWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASML 172 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHH
Confidence 88899999999999999998999999987765544443
No 81
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.83 E-value=1.3e-18 Score=176.82 Aligned_cols=388 Identities=13% Similarity=0.075 Sum_probs=248.6
Q ss_pred ccCCCcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHH
Q 008158 11 KKPGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFA 90 (575)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~ 90 (575)
.++.++|..+............ ..+...+.+++++++|+|+.|.+++.++..+...+..++-|++.|| ||.|++...+
T Consensus 8 ~k~~~~~~L~~S~~af~v~F~V-W~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~dr-fGgR~~~~~s 85 (417)
T COG2223 8 GKRIARRNLWLSTLAFDVGFMV-WTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDR-FGGRKWTILS 85 (417)
T ss_pred cccchhHHHHHHHHHHHHHHHH-HHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcc-cCchHHHHHH
Confidence 3455666666555443333333 3467788889999999999999999999999999999999999999 5999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccc
Q 008158 91 SIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGV 170 (575)
Q Consensus 91 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~ 170 (575)
.++..+-.+..+++.+.| +.+.+++.+++.|++. +.++...++++.+||+++
T Consensus 86 ~~l~~IP~~~~~~a~~~~-----------------------~~~~ll~~gll~G~~G-asFav~m~~~s~~fP~~~---- 137 (417)
T COG2223 86 MLLLLIPCLGLAFAVTYP-----------------------STWQLLVIGLLLGLAG-ASFAVGMPNASFFFPKEK---- 137 (417)
T ss_pred HHHHHHHHHHHHHHccCC-----------------------chHHHHHHHHHHhccc-ceehcccccccccCChhh----
Confidence 999999999999987533 3478999999999984 456777889999999988
Q ss_pred cchhhhhHHHHHHHHHHHHHHhhhhhhcccccc---chhHhHHHHHHHHHHHHHHHhccceEEeeCCCCCcchhHHHHHH
Q 008158 171 KGINSFFNWYYTTFTVVILITQTVLVYIQDSVS---WVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQVLV 247 (575)
Q Consensus 171 ~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~g---w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (575)
+|.+.+++. ..|+|..+...++.++....+ |+.+..+..+..++..+++++..++.+..++..++...
T Consensus 138 --qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~------ 208 (417)
T COG2223 138 --QGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLP------ 208 (417)
T ss_pred --hhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccch------
Confidence 999999999 889999999999999888888 99888888887777777666654432221111000000
Q ss_pred HHHHhhcccCCCCCCCCCccccCCCCcccccccCCCcchhhhhhhhhhhccCCCCCCCCCCCCccccchhhHHHhHhhhh
Q 008158 248 AAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKCLI 327 (575)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (575)
. ..+.+...++.|
T Consensus 209 -----------~--------------------------------------------------------~~~~v~~~~~~W 221 (417)
T COG2223 209 -----------A--------------------------------------------------------QLKAVFSNKDTW 221 (417)
T ss_pred -----------h--------------------------------------------------------HHHHHhcCcchH
Confidence 0 000111123334
Q ss_pred hhHHHHHHHHHHHHhhccccceeeeecccccccCCCccc-cCccccccchhHhhHhhhhcccchhHHHhhhhhcCCCCCC
Q 008158 328 KIIPIWAAGIISLTSISQQGTFTVSQAMKMNRHLGPKFQ-IPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGIT 406 (575)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~i~~~~~~~~~~~~~~r~~~r~~~~~ 406 (575)
....+......-++.+....+. +....++ .. ..++......++...+.-|+.+++ +||++.+
T Consensus 222 ~lsllY~~tFG~Fvgfs~~l~~------~~~~~fg--~~~~~Ag~~a~~f~~~g~l~Rp~GG~L----sDR~Gg~----- 284 (417)
T COG2223 222 LLSLLYFATFGGFVGFSAYLPM------YLVTQFG--LSPVTAGLIAFLFPLIGALARPLGGWL----SDRIGGR----- 284 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH------HHHHhcC--CChhhHHHHHHHHHHHHHHHHhccchh----hhhccch-----
Confidence 3333333333333333222221 1112221 11 122233344455555666666665 8887654
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHhhhhcccccCCCccchhHHHH----HHHHHHHHHHHHHhhhhHHhhhccCCchhHHH
Q 008158 407 LLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLA----PQLILMGFCEAFNIIGQIEFFNKQFPDHMKSI 482 (575)
Q Consensus 407 ~~~~i~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i----~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~ 482 (575)
+.....+..+.++........... .+ ..+.+..+ ...++.|+|++. .+..+...+| ++.|.
T Consensus 285 --rv~~~~f~~~~~~~~~l~~~~~~~-----~~---~~~~~~~~~~~l~l~~~~G~GnGs----vfk~Ip~if~-~~~G~ 349 (417)
T COG2223 285 --RVTLAVFVGMALAAALLSLFLTGF-----GH---GGSFVVFVAVFLALFVFAGLGNGS----VFKMIPVIFP-KETGA 349 (417)
T ss_pred --hHHHHHHHHHHHHHHHHHcccccc-----cc---CcchHHHHHHHHHHHHHhccCcch----heeechHHHH-hhhhH
Confidence 334555555555555544432110 00 11222222 233334444444 3333333333 36788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 008158 483 ANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCARR 551 (575)
Q Consensus 483 ~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~v~~i~~~~~~~~ 551 (575)
..|+...++.+|++.-+...+...+.++ .+...|+++..+.+++.+..+....|
T Consensus 350 v~G~vga~G~lGGf~lp~~~g~~~~~tg---------------~~~~~f~~~~~~~~~a~v~~~~~y~r 403 (417)
T COG2223 350 VTGIVGAIGGLGGFFLPLAFGVSLDLTG---------------SYTGAFMLLLAFYLVALVLTWALYAR 403 (417)
T ss_pred HHHHHHHhccccccchhHHHHHHHHhcc---------------cHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8888888899999888888888877651 24677888888888888877776554
No 82
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.83 E-value=6.9e-19 Score=186.05 Aligned_cols=392 Identities=11% Similarity=0.114 Sum_probs=229.8
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhH
Q 008158 55 AANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLG 134 (575)
Q Consensus 55 ~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (575)
-+.+++++.++..+++.++|+++||+ |||..+.++.++..++.+...++...+ ...
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~-GRK~~l~~~~~l~~~~~~~~~~s~~~~-----------------------~~e 117 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRF-GRKNALLLSNLLAVLAALLMGLSKSAP-----------------------SFE 117 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHHHHHHhh-----------------------hHH
Confidence 45678999999999999999999995 999999999999999888888765322 677
Q ss_pred HHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhh--hccccccchhHhHHHH
Q 008158 135 VLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLV--YIQDSVSWVIGFGIPT 212 (575)
Q Consensus 135 ~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~--~l~~~~gw~~~f~~~~ 212 (575)
.++++|++.|+..|......+.++.|..|++. ||........+.++|..++..++. .+.+.-.|++.+.+..
T Consensus 118 ~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~------RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~ 191 (485)
T KOG0569|consen 118 MLILGRLIVGLACGLSTGLVPMYLTEISPKNL------RGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPL 191 (485)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHhhcChhhh------ccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHH
Confidence 89999999999999999999999999999988 999999999999999999976652 3445567999998888
Q ss_pred HHHHHHHHHHHhcc--ceEEee-CCCCCcchhHHHHHHHHHHhhcccCCCCCCCCCccccCCCCcccccccCCCcchhhh
Q 008158 213 VLMIGAIILFLVGK--KLYVLV-EPEGSIFSGIGQVLVAAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRF 289 (575)
Q Consensus 213 ~~~~i~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (575)
+..++.+++..+.. |++.-. +.+++.++ +.++. -+.+. +.++.... ...+.........++.+.
T Consensus 192 i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~---~sl~~----y~G~~-----~~~~~~e~-~~~e~~~~~~~~~~~~sl 258 (485)
T KOG0569|consen 192 IPALLQLALLPFLPESPKYLLIKKGDEEEAR---KALKF----YRGKE-----DVEAEIEE-MLREIEEEELEKKKQISL 258 (485)
T ss_pred HHHHHHHHHHhcCCCCcchHHHHcCCHHHHH---HHHHH----HhCCC-----cchhHHHH-HHHHHHHhccccccCCcH
Confidence 87666666554433 222111 11111111 11111 00000 00000000 000000000000000000
Q ss_pred hhhhhhhccCCCCCCCCCCCCccccchhhHHHhHhhhhhhHHHHHHHHHHHHhhccccceee--eecccccccCCCcccc
Q 008158 290 LNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKCLIKIIPIWAAGIISLTSISQQGTFTV--SQAMKMNRHLGPKFQI 367 (575)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~--~~~~~~~~~~~~~~~~ 367 (575)
++..+. ...|+.+...+.+ ...+|+.+... .+....-... |++.
T Consensus 259 ----------------------~~~~~~--~~lR~~~~i~~~v--------~~~qq~sGi~ai~~Yst~i~~~a--G~~~ 304 (485)
T KOG0569|consen 259 ----------------------RQLLKN--PTLRRPLLIGIVV--------SFAQQFSGINAIFFYSTSIFKTA--GFTP 304 (485)
T ss_pred ----------------------HHHhcC--cchhHHHHHHHHH--------HHHHHhcCcceeHHHHHHHHHHc--CCCH
Confidence 000000 0111111111111 11122222111 1111111111 1111
Q ss_pred Cccc-----cccchhHhhHhhhhcccchhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHhHhhhhcccccCCCc
Q 008158 368 PPGT-----VGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMS 442 (575)
Q Consensus 368 ~~~~-----~~~i~~~~~~i~~~~~~~~~~~~~~r~~~r~~~~~~~~~i~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (575)
.... .+.++.+..++. ..+.||.+|| +++..+..++.+..+.+.......... .
T Consensus 305 ~~a~~an~~~g~v~~~~t~~~--------~~lid~~gRR-------pLll~~~~~~~~~~~~~~~~~~l~~~~------~ 363 (485)
T KOG0569|consen 305 EEAQYANLGIGIVNLLSTLVS--------PFLIDRLGRR-------PLLLISLSLMAVALLLMSIALFLSNSF------G 363 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHH--------HHHHHhcCCc-------HHHHHHHHHHHHHHHHHHHHHHHHHHh------h
Confidence 1111 122233333322 2247887766 346666666666655555443221110 0
Q ss_pred cchhHHHHHHHHHHHHHHHH-HhhhhHHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCC
Q 008158 443 QVSVFWLAPQLILMGFCEAF-NIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTND 521 (575)
Q Consensus 443 ~~~~~~~i~~~~l~g~g~~~-~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~~~~ 521 (575)
.+-.+..+...++..+..+. ..|..+-+..|.+|++.|+.++++....+++.+++-....+.+.+..
T Consensus 364 ~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~------------ 431 (485)
T KOG0569|consen 364 SWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVI------------ 431 (485)
T ss_pred hHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------------
Confidence 01111122333333333333 36778888999999999999999999999999999999999887654
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccccccccc
Q 008158 522 IDAGRLDYFYFLIAGLGGLNIVYFLYCARRYRYKSGIQSL 561 (575)
Q Consensus 522 ~~~~~~~~~f~~~a~i~~v~~i~~~~~~~~~~~~~~~~~~ 561 (575)
|. +.|..+++.+++..++.+...+++|+|+..+..
T Consensus 432 ----g~-~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~ 466 (485)
T KOG0569|consen 432 ----GP-YVFILFVIPLAIFLIYLYRYLPETKGRTPYEII 466 (485)
T ss_pred ----cc-hhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHH
Confidence 11 678888899999988999999999988776543
No 83
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.82 E-value=8.9e-19 Score=183.92 Aligned_cols=159 Identities=13% Similarity=0.144 Sum_probs=118.4
Q ss_pred HHHHHHHHhhhhC--CChhhHHHHHHHH--H---HHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCC
Q 008158 37 LANFMVYLLKEYH--MNQTSAANILNIW--G---GVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQ 109 (575)
Q Consensus 37 ~~~l~~yl~~~l~--~~~~~~~~i~~~~--~---~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~ 109 (575)
......++.+++. .++++.+.+.+.. . +...+++++.|+++||+ |||+++..+.++..++.++++++.+.+.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~ 90 (394)
T TIGR00883 12 YGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRI-GRKKTLVITLLMMGIGTLLIGLLPSYAT 90 (394)
T ss_pred HHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhh-hhHHHHHHHHHHHHHHHHHHhhCCChhh
Confidence 3456666666654 4455555554432 2 22346789999999995 9999999999999999999888653221
Q ss_pred CCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHH
Q 008158 110 LHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVIL 189 (575)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~ 189 (575)
. .......+++.|+++|++.+...+....++.|.+|+++ |++..++.+.+..+|..
T Consensus 91 ~------------------~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~G~~ 146 (394)
T TIGR00883 91 I------------------GIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGK------RGFYGSFQQVGAPVGLL 146 (394)
T ss_pred h------------------HHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCccc------chHHHHHHHHHHHHHHH
Confidence 0 00012358899999999999999999999999999877 99999999999999999
Q ss_pred HHhhhhhhcc--------ccccchhHhHHHHHHHHHHHH
Q 008158 190 ITQTVLVYIQ--------DSVSWVIGFGIPTVLMIGAII 220 (575)
Q Consensus 190 ~~~~v~~~l~--------~~~gw~~~f~~~~~~~~i~~~ 220 (575)
+++.++..+. +.++||+.|++.++..++...
T Consensus 147 i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 185 (394)
T TIGR00883 147 LAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLY 185 (394)
T ss_pred HHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHH
Confidence 9998766543 357899999877665554443
No 84
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.82 E-value=6.4e-18 Score=185.08 Aligned_cols=418 Identities=12% Similarity=0.115 Sum_probs=238.9
Q ss_pred hhHHHHHHHHhhhh-----CCCh--hhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhc
Q 008158 35 GLLANFMVYLLKEY-----HMNQ--TSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWL 107 (575)
Q Consensus 35 ~~~~~l~~yl~~~l-----~~~~--~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~ 107 (575)
+..+.+...+++.. ..+. .+.+++.+++.++..+++++.|+++|++ |||++++.+.+++.+|.++++.+.
T Consensus 64 g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~-GRk~~l~~~~~~~~iG~ii~~~a~-- 140 (513)
T KOG0254|consen 64 GGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRI-GRKKTLLLAVVLFLIGAIIIALAP-- 140 (513)
T ss_pred ccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHhh--
Confidence 45555555555532 1122 3458999999999999999999999995 999999999999999999999987
Q ss_pred CCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHH
Q 008158 108 PQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVV 187 (575)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig 187 (575)
+...++++|++.|+|.|+.....+.+++|..|++. |+...+.++...++|
T Consensus 141 ------------------------~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~------RG~l~~~~~l~~~~G 190 (513)
T KOG0254|consen 141 ------------------------SWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHI------RGTLVSLYQLFITIG 190 (513)
T ss_pred ------------------------hHHHHHHHHHHhccchhhhhhcchhhHhhcCChhh------hHHHHHHHHHHHHHH
Confidence 67889999999999999999999999999999887 999999999999999
Q ss_pred HHHHhhhhhhcccc-ccchhHhHHHHHHHHHHHHHHHhcc--ceEEeeCCCCCcchhHHHHHHHHHHhhcccCCCCCCCC
Q 008158 188 ILITQTVLVYIQDS-VSWVIGFGIPTVLMIGAIILFLVGK--KLYVLVEPEGSIFSGIGQVLVAAYKKRRLTLPQGQMDH 264 (575)
Q Consensus 188 ~~~~~~v~~~l~~~-~gw~~~f~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (575)
..++..++....+. ++||+.+++..+..++..+..++.. |++..+ +++ ..+..+.+......+ +. +.
T Consensus 191 i~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~--~g~-~~~a~~~l~~l~g~~----~~---~~ 260 (513)
T KOG0254|consen 191 ILLGYCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIE--KGR-LEEAKRSLKRLRGLS----PE---DV 260 (513)
T ss_pred HHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHH--cCC-hHHHHHHHHHHhCCC----Cc---ch
Confidence 99996555544432 4899888877766555555533321 221111 110 111111111111100 00 00
Q ss_pred CccccCCCCcccccccCCCcchhhhhhhhhhhccCCCCCCCCCCCCccccchhhHHHhHhhhhhhHHHHHHHHHHHHhhc
Q 008158 265 HGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKCLIKIIPIWAAGIISLTSIS 344 (575)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (575)
+.++ ........... ... .....|+.... ...+|+....+.+ ..+..+.
T Consensus 261 ~~~~-------------------~~~~~~~~~~~----~~~-~~~~~~~~l~~--~~~~~~~~i~~~l-----~~fqq~t 309 (513)
T KOG0254|consen 261 EVEL-------------------ELLKIKLLVEA----EVA-EGKASWGELFS--PKVRKRLIIGLLL-----QLFQQLT 309 (513)
T ss_pred HHHH-------------------HHHHHHHHHhh----hcc-cccccHHHhcC--cchHHHHHHHHHH-----HHHHHHh
Confidence 0000 00000000000 000 00000100000 0111221111111 1111112
Q ss_pred cccceeeeecccccccCCCccccCc----cccccchhHhhHhhhhcccchhHHHhhhhhcCCCCCChHHHHHHHHHHHHH
Q 008158 345 QQGTFTVSQAMKMNRHLGPKFQIPP----GTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSIL 420 (575)
Q Consensus 345 ~~~t~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~~i~~~~~~~~~~~~~~r~~~r~~~~~~~~~i~ig~~~~~~ 420 (575)
.......+.. ..-... +...++ .....++.++.++. ..+.||.+|| ..+..|...+.+
T Consensus 310 G~~~~~~Y~~-~if~~~--g~~~~~~~~~~~~~~v~~~~t~~~--------~~lvd~~gRr-------~lll~s~~~m~~ 371 (513)
T KOG0254|consen 310 GINYVFYYST-TIFKSA--GLKSDTFLASIILGVVNFLGTLVA--------TYLVDRFGRR-------KLLLFGAAGMSI 371 (513)
T ss_pred CCceEEeehH-HHHHhc--CCCCchHHHHHHHHHHHHHHHHHH--------HHHHHHhccH-------HHHHHhHHHHHH
Confidence 2112111111 111111 111111 11112222222222 2347787655 457888888888
Q ss_pred HHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHHHHHHHHHHHHHHHHHHHH
Q 008158 421 SMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSL 500 (575)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~lg~~l~~~ 500 (575)
++++++........... ......+..++..++..........|..+.+..|.+|.+.|+.+.++....+++.+.+-..
T Consensus 372 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~ 449 (513)
T KOG0254|consen 372 CLVILAVVGVFALYYPN--SSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISF 449 (513)
T ss_pred HHHHHHHHHHHhccCCC--cccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHH
Confidence 88887776443211110 0012233333333333334444456666778899999999999999999999998888876
Q ss_pred HHHHhhhhcccCCCCCcccCCCCcchhHHHHHHHHHHHHHHHH-HHHHHHhhccccccccccc
Q 008158 501 LITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIV-YFLYCARRYRYKSGIQSLE 562 (575)
Q Consensus 501 l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~v~~i-~~~~~~~~~~~~~~~~~~~ 562 (575)
..+...+.. +....|..+++++.+..+ +.+++.+++++++.++.++
T Consensus 450 ~~~~~~~~~----------------~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~ 496 (513)
T KOG0254|consen 450 FFPFITEAL----------------GIGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINE 496 (513)
T ss_pred HHHHHHHhc----------------cccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHH
Confidence 666554321 113456777777777766 6777889999888776543
No 85
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.82 E-value=8.8e-18 Score=178.69 Aligned_cols=169 Identities=12% Similarity=0.053 Sum_probs=137.9
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHH
Q 008158 22 ILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTV 101 (575)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~ 101 (575)
+++..++..-..+++...+.+.+++++|+|..+.+++.+.+.++..++.++.|++.||+ |||+++..+.+++.++.++.
T Consensus 7 ~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~-G~r~~~~~g~~l~~~g~~l~ 85 (410)
T TIGR00885 7 LITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKL-SYKAGILLGLFLYALGAFLF 85 (410)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHH
Confidence 33444444333456777788888999999999999999999999999999999999995 99999999999999998886
Q ss_pred HHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHH
Q 008158 102 TLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYY 181 (575)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 181 (575)
..+.. ..+++.+++.|++.|+|.|...+..++++.+..|+++ |++..++.+
T Consensus 86 ~~~~~-----------------------~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 136 (410)
T TIGR00885 86 WPAAE-----------------------IMNYTLFLVGLFILTAGLGFLETAANPYILVMGPEST------ATRRLNLAQ 136 (410)
T ss_pred HHHHh-----------------------hccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhH------HHHHHHHHH
Confidence 55431 1157788999999999999999999999999988766 888899999
Q ss_pred HHHHHHHHHHhhhhhhccc--------------------------cccchhHhHHHHHHHHHHHH
Q 008158 182 TTFTVVILITQTVLVYIQD--------------------------SVSWVIGFGIPTVLMIGAII 220 (575)
Q Consensus 182 ~~~~ig~~~~~~v~~~l~~--------------------------~~gw~~~f~~~~~~~~i~~~ 220 (575)
...++|..++|.+++.+.. ..+||++|++.+++.++..+
T Consensus 137 ~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~ 201 (410)
T TIGR00885 137 SFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVAL 201 (410)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988876632 23699999876665444433
No 86
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.82 E-value=1.7e-18 Score=180.54 Aligned_cols=150 Identities=10% Similarity=0.130 Sum_probs=125.2
Q ss_pred HhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 008158 32 ATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLH 111 (575)
Q Consensus 32 ~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~ 111 (575)
..+.....+.+.+.+++|+|.++.+++.+.+.++..++.++.|+++||+ ||||++..+.++..++.+.. .++
T Consensus 14 ~~~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~-~~~------ 85 (355)
T TIGR00896 14 PALTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRF-GEERSVAAGLLLIAAGILIR-SAP------ 85 (355)
T ss_pred CccccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CchHHHHHHHHHHHHHHHHH-Hhc------
Confidence 3444556667778889999999999999999999999999999999995 99999999998888777666 332
Q ss_pred CCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHH
Q 008158 112 PPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILIT 191 (575)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~ 191 (575)
+.+.+++.|++.|+|.+...+..+.+..|.+| ++ |+++.++++...++|..++
T Consensus 86 --------------------~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~g~~i~ 138 (355)
T TIGR00896 86 --------------------GTALLFAGTALIGVGIAIINVLLPSLIKRDFP-QR------VGLMTGLYSMALMGGAALA 138 (355)
T ss_pred --------------------cHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-ch------hhHHHHHHHHHHHHHHHHH
Confidence 55678899999999999888888888888876 34 8999999999999999999
Q ss_pred hhhhhhccccc--cchhHhHHHHHHHH
Q 008158 192 QTVLVYIQDSV--SWVIGFGIPTVLMI 216 (575)
Q Consensus 192 ~~v~~~l~~~~--gw~~~f~~~~~~~~ 216 (575)
+.+++++.+.. +||+.|.+.++..+
T Consensus 139 ~~~~~~l~~~~~~~w~~~f~~~~~~~~ 165 (355)
T TIGR00896 139 AAATVPLAQHSGGHWQQALAWWALPAL 165 (355)
T ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 99988887654 39988876555433
No 87
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.80 E-value=3.4e-17 Score=173.88 Aligned_cols=165 Identities=9% Similarity=0.047 Sum_probs=129.6
Q ss_pred HHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcc-----cchH-HHHHHHHHHHHH
Q 008158 24 GNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYI-----GRFK-TITFASIAAILG 97 (575)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~-----Grr~-~~~~~~~l~~~~ 97 (575)
+..+...+.+.-...-+|.|+++ .|+|.++.|++..+... .+..+++|+++|| + |||| .+..+.++.+++
T Consensus 6 ~l~~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr-~~~~~~g~rr~~l~~~~~~~~l~ 81 (402)
T PRK11902 6 LLGFASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDR-YTPPLLGRRRGWLLLTQVGLAAS 81 (402)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHc-ccccCCCcchhHHHHHHHHHHHH
Confidence 34445555555566778888885 59999999999666665 6888999999999 6 7775 788888888877
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhh
Q 008158 98 MLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFF 177 (575)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 177 (575)
...+++... ..+.+.+++..++.++..+...+...+++.|++|+++ |+++.
T Consensus 82 ~~~l~~~~~-----------------------~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~------r~~~~ 132 (402)
T PRK11902 82 IAAMAFCPP-----------------------HAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEE------RGAGA 132 (402)
T ss_pred HHHHHhcCc-----------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh------hhHHH
Confidence 777766421 1246667777777888888889999999999999877 99999
Q ss_pred HHHHHHHHHHHHHHhhhhhhcccc-ccchhHhHHHHHHHHHHHHH
Q 008158 178 NWYYTTFTVVILITQTVLVYIQDS-VSWVIGFGIPTVLMIGAIIL 221 (575)
Q Consensus 178 ~~~~~~~~ig~~~~~~v~~~l~~~-~gw~~~f~~~~~~~~i~~~~ 221 (575)
++...+.++|..+++.+++++.+. .|||..|++.++..++..+.
T Consensus 133 ~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~ 177 (402)
T PRK11902 133 AVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALT 177 (402)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888875 59999999877765554443
No 88
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.78 E-value=1.6e-17 Score=173.29 Aligned_cols=160 Identities=14% Similarity=0.188 Sum_probs=123.2
Q ss_pred hhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhc----ccchHHH-HHHHHHHHHHHHHHHHHhhcC
Q 008158 34 IGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTY----IGRFKTI-TFASIAAILGMLTVTLTAWLP 108 (575)
Q Consensus 34 ~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~----~Grr~~~-~~~~~l~~~~~~~~~~~~~~~ 108 (575)
+++.....+.+.+++|+|.++.++.... .+...+ .++.|+++||+ +||||.+ +.+.++..+.+...++...
T Consensus 4 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~-- 79 (356)
T TIGR00901 4 LGLVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVP-- 79 (356)
T ss_pred chhHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCc--
Confidence 3455666667777899999999999655 344444 88999999994 3899974 5666666666666655431
Q ss_pred CCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHH
Q 008158 109 QLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVI 188 (575)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~ 188 (575)
..+.+.+....++.+++.+...+...+++.|++|+++ |+++.++...+.++|.
T Consensus 80 ---------------------~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~------r~~~~~~~~~~~~~G~ 132 (356)
T TIGR00901 80 ---------------------STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEE------LGYGSTIYIVGYRAGM 132 (356)
T ss_pred ---------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hchHHHHHHHHHHHHH
Confidence 1245566677777888888888999999999999877 9999999999999999
Q ss_pred HHHhhhhhhcccccc--------chhHhHHHHHHHHHHHHHHHh
Q 008158 189 LITQTVLVYIQDSVS--------WVIGFGIPTVLMIGAIILFLV 224 (575)
Q Consensus 189 ~~~~~v~~~l~~~~g--------w~~~f~~~~~~~~i~~~~~~~ 224 (575)
++++.+++++.+..+ ||..|++.++..++.++..++
T Consensus 133 ~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~ 176 (356)
T TIGR00901 133 LLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLF 176 (356)
T ss_pred HHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 999999998887777 999999888776665554443
No 89
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.76 E-value=7.9e-16 Score=164.53 Aligned_cols=426 Identities=12% Similarity=0.017 Sum_probs=241.1
Q ss_pred HHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhh---cccchHHHHHH-HHHHHHHHHHHHHHhh
Q 008158 31 LATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDT---YIGRFKTITFA-SIAAILGMLTVTLTAW 106 (575)
Q Consensus 31 ~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~---~~Grr~~~~~~-~~l~~~~~~~~~~~~~ 106 (575)
+++-...+++++|+ +++|.+....+.+..+..+...+.+|+.|+++|| .+||||.++.+ ....+++..+++++.+
T Consensus 18 ~~~~l~~~~l~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~ 96 (477)
T TIGR01301 18 FGWALQLSLLTPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAAD 96 (477)
T ss_pred HHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCch
Confidence 44333445555655 6899999999999999999999999999999994 25999998875 5555566666666543
Q ss_pred cCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHH
Q 008158 107 LPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTV 186 (575)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i 186 (575)
+..+..++. . ...........+++..+..++....++...++++|.+|+++ ++++.++++.+...++
T Consensus 97 ~~~~~~~~~--~-------~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~----~~~~~a~~~~~~~~~l 163 (477)
T TIGR01301 97 IGHLFGDNL--D-------KKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDA----RRTRIANAYFSFFMAI 163 (477)
T ss_pred hhhhccccc--c-------ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchh----HHHHHHHHHHHHHHHH
Confidence 221111000 0 00001112334555555666788788888999999999876 2346899999999999
Q ss_pred HHHHHhhhhhhc--ccc-------------ccchhHhHHHHHHHHHHHHHHHhccceEEeeCCCCCcchhHHHHHHHHHH
Q 008158 187 VILITQTVLVYI--QDS-------------VSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQVLVAAYK 251 (575)
Q Consensus 187 g~~~~~~v~~~l--~~~-------------~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (575)
|.++|+.++++. .+. .+.+..|++.+++.++..++..+..++.+..++++. .
T Consensus 164 G~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~-~------------ 230 (477)
T TIGR01301 164 GNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDF-I------------ 230 (477)
T ss_pred HHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccc-h------------
Confidence 999999988864 111 156889998888777776665554443221111100 0
Q ss_pred hhcccCCCCCCCCCccccCCCCcccccccCCCcchhhhhhhhhhhccCCCCCCCCCCCCccccchhhHHHhHhhhhhhHH
Q 008158 252 KRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKCLIKIIP 331 (575)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (575)
+.+.+..+ +.+ ....+.+. | +.-..--|.+.+.+.
T Consensus 231 ~~~~~~~~---~~~-------------------~~~~~~~i-------------------~----~~~~~mP~~m~~l~~ 265 (477)
T TIGR01301 231 NSEAAPPS---KHG-------------------EEAFFGEL-------------------F----GAFKYLPRPVWILLL 265 (477)
T ss_pred hhhccccc---ccc-------------------hhhhHHHH-------------------H----HHHHHCCHHHHHHHH
Confidence 00000000 000 00000000 0 000011123333444
Q ss_pred HHHHHHHHHHhhccccceeeeeccccccc-CCCccccC---ccccccchhHhhHhhhhcccchhHHHhhhhhcCCCCCCh
Q 008158 332 IWAAGIISLTSISQQGTFTVSQAMKMNRH-LGPKFQIP---PGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITL 407 (575)
Q Consensus 332 ~~~~~~~~~~~~~~~~t~~~~~~~~~~~~-~~~~~~~~---~~~~~~i~~~~~~i~~~~~~~~~~~~~~r~~~r~~~~~~ 407 (575)
...+...-|..+..+.|.+..+..+-... ....++-. ..+...++.+...+. +.++.++.+|+++|
T Consensus 266 vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~----s~~l~~l~~~~g~~------ 335 (477)
T TIGR01301 266 VTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGIT----SIGMEKLCRGWGAG------ 335 (477)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHhccc------
Confidence 44444444554444445332221111100 00000000 111112233332222 22334446665432
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhhc--ccccC-C--Cccch-hHHHHHHHHHHHHHHHHHhhhhHHhhhccCCc--hh
Q 008158 408 LQRIGIGMIFSILSMIVAGLVERGRRA--SAHLH-P--MSQVS-VFWLAPQLILMGFCEAFNIIGQIEFFNKQFPD--HM 479 (575)
Q Consensus 408 ~~~i~ig~~~~~~~~~~~~~~~~~~~~--~~~~~-~--~~~~~-~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~--~~ 479 (575)
+..-.++.++.++++....+......+ ....+ . .++.. .+..+..+.+.|++.+..+..-++.+.+..|+ +.
T Consensus 336 k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~ 415 (477)
T TIGR01301 336 KRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAG 415 (477)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCC
Confidence 233467777888887777655421100 00000 0 01111 35566677888999999999999999999995 55
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 008158 480 KSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCARRY 552 (575)
Q Consensus 480 rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~v~~i~~~~~~~~~ 552 (575)
.|..+|+.|+.-.+...+.....+.+.+..+. +..+++.+.++.++++.+..++..++.
T Consensus 416 ~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~--------------~~~~~~~~~gv~~~~aa~~~~~~~~~~ 474 (477)
T TIGR01301 416 QGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGG--------------GNLPAFVVGAVAAFVSGLLALILLPRP 474 (477)
T ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHHHcCC--------------CCeeHHHHHHHHHHHHHHHHHHhCCCC
Confidence 69999999999999999999888875554421 223567777888888877777765553
No 90
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.75 E-value=9.3e-18 Score=171.15 Aligned_cols=407 Identities=14% Similarity=0.034 Sum_probs=224.3
Q ss_pred CChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCc
Q 008158 50 MNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSAN 129 (575)
Q Consensus 50 ~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (575)
.+....+.+.++..++..+++++.||++||+ |||+++...+++++++++.++++.. .++.
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~-GRK~vYG~~liImIi~t~~~~~s~~-------------------~~~~ 140 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKF-GRKKVYGKELIIMIICSALSGLSVG-------------------TTSP 140 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-cchhhhhHHHHHHHHHHHHhccCCC-------------------CCCC
Confidence 5667788899999999999999999999995 9999999999999999997776432 1111
Q ss_pred chhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhh----hhcc----c-
Q 008158 130 SMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVL----VYIQ----D- 200 (575)
Q Consensus 130 ~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~----~~l~----~- 200 (575)
..-+.++...|+++|+|.|+-+|+..+..+|...... ||...+..-.....|.+.|.++. +-.- .
T Consensus 141 ~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~------RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~ 214 (538)
T KOG0252|consen 141 LGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKT------RGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGP 214 (538)
T ss_pred cchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhcc------ccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCC
Confidence 2357889999999999999999999998888766544 88777765555555555444333 2211 1
Q ss_pred ------cccchhHhHHHHHHHHHHHHHHHhccceEEeeCCCCCcchhH-HHHHHHHHHhhcccCCCCCCCCCccccCCCC
Q 008158 201 ------SVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGI-GQVLVAAYKKRRLTLPQGQMDHHGIFYDPPP 273 (575)
Q Consensus 201 ------~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (575)
..=||..|.+.++..++.+ .+. -+.|+....+.. .+-.+.+.++ ..+... . .+-+++.
T Consensus 215 ~~~~~ld~vWRl~~glg~vpa~~~l---y~R-----l~M~Et~~Y~al~~~~~~~a~~d-~~k~~~---~---~~~~~~~ 279 (538)
T KOG0252|consen 215 STYPHLDGVWRIIFGLGAVPALLVL---YFR-----LKMPETARYTALVSKKLKQAAGD-MKKVLS---V---DIEAEST 279 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHH---Hhh-----hcCCcchhHHHHhhcCHhhhhhc-cccccc---c---ccchhhc
Confidence 1239998887666443222 211 111111111100 0000111100 000000 0 0000000
Q ss_pred cccccccCCCcchhhhhhhhhhhccCCCCCCCCCCCCccccchhhHHHhHhhhhhhHHHHHHHHHHHHhhccccceeeee
Q 008158 274 KLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKCLIKIIPIWAAGIISLTSISQQGTFTVSQ 353 (575)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~ 353 (575)
.+ ...+++..+..+. .....++ ...-++.+...++..-.-+.+....+
T Consensus 280 ~~----------------------------~~~~~~~~~~~~F---~~~f~~~-hg~~Llgt~~~WFllDiafy~~nL~~ 327 (538)
T KOG0252|consen 280 AE----------------------------SDVPPPSNSFGLF---SRLFLRW-HGKHLLGTAGTWFLLDIAFYGQNLFQ 327 (538)
T ss_pred cc----------------------------cCCCCcccccchH---HHHHHHH-HHHHHHHHHHHHHhhhhhhhccccHH
Confidence 00 0001111111000 0011111 11222333334443332233322222
Q ss_pred cccccccCCCccccCccc-cc-------cchhHhhHhhhhcccchhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHH
Q 008158 354 AMKMNRHLGPKFQIPPGT-VG-------VISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVA 425 (575)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~-~~-------~i~~~~~~i~~~~~~~~~~~~~~r~~~r~~~~~~~~~i~ig~~~~~~~~~~~ 425 (575)
....+. ++ ..++. .. -.+.+.+.......-|+...+.|+++|| +.-..|++++.+-++.+
T Consensus 328 s~I~~~-ig----~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk-------~iq~~GF~~~~i~~~~~ 395 (538)
T KOG0252|consen 328 SVIFSA-IG----VIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRK-------YIQLMGFFIMTIFFFVI 395 (538)
T ss_pred HHHHHh-hc----cCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhH-------HHHHhhHHHHHHHHHHH
Confidence 221110 10 11111 01 1122222222222334445567887665 45677888888877777
Q ss_pred HHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008158 426 GLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIV 505 (575)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~lg~~l~~~l~~~i 505 (575)
+...+.. .......+...+...+++..-..+...+..|.+|++.||+.-|++-..+-+|.+++.....+.
T Consensus 396 ~~~y~~~----------~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~ 465 (538)
T KOG0252|consen 396 AGPYNQL----------ENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYL 465 (538)
T ss_pred cCCcccc----------cccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHh
Confidence 6543210 001111222223334455444555666778999999999999999999999999999888776
Q ss_pred hhhcccCCCCCcccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccc
Q 008158 506 HGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCARRYRYKSGIQSLED 563 (575)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~v~~i~~~~~~~~~~~~~~~~~~~~ 563 (575)
.+. + ++ ...+..+++++++++++++.++.+++- +.++++.++.+++
T Consensus 466 t~~-------~-yp---~~~g~~~v~~i~~~~~~~gi~~T~l~p-Etk~~~leei~~e 511 (538)
T KOG0252|consen 466 TDH-------N-YP---PNIGVRNVFIILAGCMLLGILFTLLIP-ETKGKSLEEISNE 511 (538)
T ss_pred hhc-------c-CC---ccccchHHHHHHHHHHHHhHheeEEee-cccccCHHHhcCh
Confidence 652 1 11 122667889999999999988777664 8888877665443
No 91
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.75 E-value=3.5e-17 Score=182.59 Aligned_cols=205 Identities=15% Similarity=0.149 Sum_probs=153.2
Q ss_pred CCcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHH
Q 008158 14 GGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIA 93 (575)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l 93 (575)
..++.+.+.++...+......++.....+.++++++++.++.|++.+.+.++..++.++.|+++||+ ||||.+.++.++
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~-~r~~~i~~g~ll 107 (633)
T TIGR00805 29 SKIKVFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKL-HRPIVIGIGCAI 107 (633)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhccc-CcceEEEecHHH
Confidence 3445554555545555555567777888899999999999999999999999999999999999995 999999999999
Q ss_pred HHHHHHHHHHHhhcCC-C---------------CCCCCCCCC---C----CCCccCCCc--chhhHHHHHHHHHHHHhcc
Q 008158 94 AILGMLTVTLTAWLPQ-L---------------HPPKCDVAK---P----PFGQCKSAN--SMQLGVLVMGLGLLSIGTG 148 (575)
Q Consensus 94 ~~~~~~~~~~~~~~~~-~---------------~~~~~~~~~---~----~~~~~~~~~--~~~~~~l~~~~~l~g~g~g 148 (575)
+.+|++++++.+.+.. + ....|.... . ....|.... ......++++|+++|+|.+
T Consensus 108 ~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~ 187 (633)
T TIGR00805 108 MGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGAT 187 (633)
T ss_pred HHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCC
Confidence 9999999988653211 0 011221100 0 001222211 1135668899999999999
Q ss_pred CCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhhhccccc----------------------cchh
Q 008158 149 GIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSV----------------------SWVI 206 (575)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~----------------------gw~~ 206 (575)
...+...+++.|.+|+++ |+..+++++.+..+|..+|+.+++++.+.+ +|+.
T Consensus 188 ~~~~~~~~~i~d~~~~~~------~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl 261 (633)
T TIGR00805 188 PIFPLGISYIDDFAKSKN------SPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWI 261 (633)
T ss_pred cchhcCchhhhccCCccc------cHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHH
Confidence 999999999999999887 999999999999999999999999876432 2777
Q ss_pred HhHHHHHHHHHHHHHHHhc
Q 008158 207 GFGIPTVLMIGAIILFLVG 225 (575)
Q Consensus 207 ~f~~~~~~~~i~~~~~~~~ 225 (575)
.|++.+++.++..+.+++.
T Consensus 262 ~Fli~g~l~~l~~v~l~~~ 280 (633)
T TIGR00805 262 GFLICGGVALLTSIPFFFF 280 (633)
T ss_pred HHHHHHHHHHHHHHHHHhC
Confidence 7887776655554444443
No 92
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.74 E-value=8.3e-17 Score=160.68 Aligned_cols=119 Identities=16% Similarity=0.096 Sum_probs=106.0
Q ss_pred hCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCC
Q 008158 48 YHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKS 127 (575)
Q Consensus 48 l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (575)
.+-+..-.|.+-+.|.+.+++.++.+|.++||+ |||+++++|.+..++...+.+.+.
T Consensus 63 ~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~y-GRkpvll~c~~~va~s~ll~~~S~---------------------- 119 (451)
T KOG2615|consen 63 DGASVFYAGFLGSSFSILQFISSPLWGCLSDRY-GRKPVLLACLIGVALSYLLWALSR---------------------- 119 (451)
T ss_pred ccccchhhhhHhhHHHHHHHHhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHHH----------------------
Confidence 334557789999999999999999999999997 999999999999999888888876
Q ss_pred CcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhhhccc
Q 008158 128 ANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQD 200 (575)
Q Consensus 128 ~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~ 200 (575)
++..++++|++.|+.-|-.. .+.++++|.+++++ |+.+++.......+|.++||.+||++.+
T Consensus 120 ----~F~afv~aR~l~Gi~kgnl~-v~rAiisdV~sek~------r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 120 ----NFAAFVLARFLGGIFKGNLS-VIRAIISDVVSEKY------RPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred ----HHHHHHHHHHhhhhccCchH-HHHHHHHhhcChhh------ccceeeeeehhhhcchhhcchhhhHHHh
Confidence 56667778999999988764 46899999999988 9999999999999999999999999987
No 93
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.74 E-value=8.3e-16 Score=166.73 Aligned_cols=182 Identities=12% Similarity=0.092 Sum_probs=130.4
Q ss_pred hcccccCCCcchhHHHHHHHHHHHHHhh---hhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccc
Q 008158 7 QKDQKKPGGWKAMPYILGNETFERLATI---GLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGR 83 (575)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr 83 (575)
|..|++...-+.+...+....+...+.| .......+++.+++|- .....|+.....++.....++.|.|+|. |||
T Consensus 30 ~~~p~g~~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~-~~~~~w~~~~~~l~~av~~~~~G~LSDl-fGR 107 (599)
T PF06609_consen 30 DELPDGYYRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGG-SDNWSWFSTAWTLASAVSFPFVGRLSDL-FGR 107 (599)
T ss_pred hhCCCCceeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCC-CccchHHHHHHHHHHHHHHHhhHHHHHH-hcc
Confidence 3334444444444444333333332222 2334566788999985 4778899999999999999999999999 599
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCC
Q 008158 84 FKTITFASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFD 163 (575)
Q Consensus 84 r~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~ 163 (575)
|..++.+.++.++|+++++-++ ++..++.+-.+.|+|.|.... ....++|..|
T Consensus 108 r~~~i~g~~l~vvG~Iv~atA~--------------------------~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p 160 (599)
T PF06609_consen 108 RYFFIIGSLLGVVGSIVCATAQ--------------------------NMNTFIAGMVLYGVGAGVQEL-AALAISELVP 160 (599)
T ss_pred hHHHHHHHHHHHhHHHHhhcCC--------------------------cHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcc
Confidence 9999999999999999999876 566789999999999877664 4566899998
Q ss_pred CCCcccccchhhhhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHH
Q 008158 164 ATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFL 223 (575)
Q Consensus 164 ~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~ 223 (575)
.+. |.....+.....-+....++.++..+....+|||.|++.++...+++++.+
T Consensus 161 ~k~------R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~ 214 (599)
T PF06609_consen 161 NKW------RGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIF 214 (599)
T ss_pred cch------hhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHH
Confidence 755 766666555544444445566665555567899999998877666555433
No 94
>PRK09848 glucuronide transporter; Provisional
Probab=99.74 E-value=3.1e-15 Score=161.19 Aligned_cols=150 Identities=10% Similarity=0.035 Sum_probs=99.5
Q ss_pred HHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhc---ccchHHH-HHHHHHHHHHHHH
Q 008158 25 NETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTY---IGRFKTI-TFASIAAILGMLT 100 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~---~Grr~~~-~~~~~l~~~~~~~ 100 (575)
..+...+.+.....+++.|+++.+|++..++|.+.....+...+..++.|+++||. +||||.. +.+.+...+..+.
T Consensus 16 g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~ 95 (448)
T PRK09848 16 GDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVL 95 (448)
T ss_pred chHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHH
Confidence 44445555555667888999999999999999999999999999999999999993 3777755 5555545444433
Q ss_pred HHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHH
Q 008158 101 VTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWY 180 (575)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 180 (575)
...... .. .........++...+.+++.+...+...++..+..++.+ +|.+..++.
T Consensus 96 ~~~~~~--~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~-----~r~~~~~~r 151 (448)
T PRK09848 96 VFWVPT--DW-----------------SHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQ-----SRARLGAAR 151 (448)
T ss_pred HHhCcC--CC-----------------CcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHH-----HHHHHHHHH
Confidence 321110 00 001123344555567788888888888887777776533 277776665
Q ss_pred HHH-----HHHHHHHHhhhhhhc
Q 008158 181 YTT-----FTVVILITQTVLVYI 198 (575)
Q Consensus 181 ~~~-----~~ig~~~~~~v~~~l 198 (575)
.++ .+++..++|.+.+..
T Consensus 152 ~~~~~~~~~~~~~~~~p~i~~~~ 174 (448)
T PRK09848 152 GIAASLTFVCLAFLIGPSIKNSS 174 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC
Confidence 543 345566666665543
No 95
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.73 E-value=9.6e-16 Score=160.21 Aligned_cols=176 Identities=10% Similarity=0.081 Sum_probs=145.4
Q ss_pred CCcchhHHHHHHH-HHHHHHhhhhHHHHHHHHhhhhCCChhh-HHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHH
Q 008158 14 GGWKAMPYILGNE-TFERLATIGLLANFMVYLLKEYHMNQTS-AANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFAS 91 (575)
Q Consensus 14 ~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~yl~~~l~~~~~~-~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~ 91 (575)
..|+....++|.. |+..+ -...++..+|+.+++|+++++ .|.+.+++..++.++.+++|+++||+ |.|+++..+.
T Consensus 23 ~~W~~~~~~lC~fGF~~e~--R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrl-G~K~vL~l~~ 99 (511)
T TIGR00806 23 KSWRVLVLYLCFYGFMAQF--RPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYL-RYKPVLVLQA 99 (511)
T ss_pred cchhHHHHHHHHHHHHHHh--hchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHH
Confidence 3566666555432 22211 234567788999999999999 99999999999999999999999995 9999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCccccc
Q 008158 92 IAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVK 171 (575)
Q Consensus 92 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 171 (575)
+...+.+++.+++. +...+.+.|++.|++.|+.. +...++..++|+++
T Consensus 100 l~Wsl~t~L~~fa~--------------------------Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kE----- 147 (511)
T TIGR00806 100 LSFVCVWLLLLLGT--------------------------SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSR----- 147 (511)
T ss_pred HHHHHHHHHHHHHH--------------------------HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHH-----
Confidence 99999999999976 57789999999999999999 99999999999988
Q ss_pred chhhhhHHHHHHHHHHHHHHhhhhhhccccccchhHhH---HHHHHHHHHHHHHHhcc
Q 008158 172 GINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFG---IPTVLMIGAIILFLVGK 226 (575)
Q Consensus 172 ~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~---~~~~~~~i~~~~~~~~~ 226 (575)
|+++.++...+.++|.++++++++++ ..+|||+-+. ++.....+++++.+++.
T Consensus 148 -R~ratsi~~sg~~vG~~Ia~~L~qll-~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP 203 (511)
T TIGR00806 148 -YQRAAAYSRAAVLLGVFLSSVLGQLL-VTLGWISYSTLNIISLVFMTFSVFLALFLK 203 (511)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999995 4579986543 44555555555555443
No 96
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.73 E-value=2e-15 Score=152.82 Aligned_cols=155 Identities=14% Similarity=0.019 Sum_probs=128.8
Q ss_pred cchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHH
Q 008158 16 WKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAI 95 (575)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~ 95 (575)
.|.-..+++.-|+.+-......-.+.+.+++.+|++..|++++...+..++.+++++.|++.+|+ |+|+.++.|+.+++
T Consensus 11 ~~~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~-gyk~gi~lgL~l~a 89 (422)
T COG0738 11 VKLAFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKL-GYKAGIVLGLLLYA 89 (422)
T ss_pred ceeHHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHh-hhHHHHHHHHHHHH
Confidence 34334444444444333355667889999999999999999999999999999999999999995 99999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhh
Q 008158 96 LGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINS 175 (575)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 175 (575)
+|..+..-+++ ...+..++++.++.|.|.+..+.+.+++++...|+++ -..
T Consensus 90 vg~~lF~pAa~-----------------------~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~------a~~ 140 (422)
T COG0738 90 VGAALFWPAAS-----------------------SKSYGFFLVALFILASGIGLLETAANPYVTLLGKPES------AAF 140 (422)
T ss_pred HHHHHHhhhhh-----------------------hhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchh------HHH
Confidence 99988864432 2367788999999999999999999999999999866 566
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhccc
Q 008158 176 FFNWYYTTFTVVILITQTVLVYIQD 200 (575)
Q Consensus 176 ~~~~~~~~~~ig~~~~~~v~~~l~~ 200 (575)
-++..+....+|+.++|.+++++..
T Consensus 141 rlnl~q~fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 141 RLNLAQAFNGLGAILGPLLGSSLIL 165 (422)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 6777788889999999999988765
No 97
>PRK09669 putative symporter YagG; Provisional
Probab=99.73 E-value=1.3e-15 Score=163.96 Aligned_cols=172 Identities=10% Similarity=0.057 Sum_probs=119.2
Q ss_pred HHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhc---ccchH-HHHHHHHHHHHHHHHHHH
Q 008158 28 FERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTY---IGRFK-TITFASIAAILGMLTVTL 103 (575)
Q Consensus 28 ~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~---~Grr~-~~~~~~~l~~~~~~~~~~ 103 (575)
-..+.+..+..+++.|+.+.+|+|...+|.+..+..+...+..|+.|+++||. +|||| .++.+.+...++.++...
T Consensus 20 ~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~ 99 (444)
T PRK09669 20 ACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFY 99 (444)
T ss_pred hhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHh
Confidence 33444455677899999999999999999999999999999999999999993 37754 555666666666554443
Q ss_pred HhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHH
Q 008158 104 TAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTT 183 (575)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 183 (575)
.+..++ ......+++..++.+++..+......++.+|+.++.+ +|.+..++...+
T Consensus 100 ~p~~~~--------------------~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~-----eR~~l~~~r~~~ 154 (444)
T PRK09669 100 TPDFGA--------------------TGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPR-----ERHSLQSWRFAL 154 (444)
T ss_pred CCCCCc--------------------chHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHH-----HHHHHHHHHHHH
Confidence 221100 1234556666666777777777778889999885432 388898998888
Q ss_pred HHHHHHHHhhhhhhccc-------cccchhHhHHHHHHHHHHHHHHHh
Q 008158 184 FTVVILITQTVLVYIQD-------SVSWVIGFGIPTVLMIGAIILFLV 224 (575)
Q Consensus 184 ~~ig~~~~~~v~~~l~~-------~~gw~~~f~~~~~~~~i~~~~~~~ 224 (575)
.++|..+++.+...+.. ..+|+..+.+.+++.++..++.++
T Consensus 155 ~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~ 202 (444)
T PRK09669 155 SFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFF 202 (444)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhC
Confidence 88888887754433221 347887777666555544444433
No 98
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.73 E-value=2.5e-15 Score=163.03 Aligned_cols=169 Identities=8% Similarity=0.003 Sum_probs=115.5
Q ss_pred HHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhh----hcccch-HHHHHHHHHHHHHHHHHHH
Q 008158 29 ERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISD----TYIGRF-KTITFASIAAILGMLTVTL 103 (575)
Q Consensus 29 ~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD----~~~Grr-~~~~~~~~l~~~~~~~~~~ 103 (575)
..+.+..+.++++.|+++.+|++...+|.+..+.-+...+..|+.|+++| | +||| +-++.+.+...++.+++..
T Consensus 18 ~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr-~Grrrp~il~g~i~~~i~~~llf~ 96 (473)
T PRK10429 18 KDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSR-WGKFKPWILIGTLANSVVLFLLFS 96 (473)
T ss_pred HhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCC-CCCcchhHhhhhHHHHHHHHHHHc
Confidence 34444556788999999999999999999999999999999999999999 6 4985 5566676666666555533
Q ss_pred HhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHH
Q 008158 104 TAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTT 183 (575)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 183 (575)
....+ +......+++..++.+++..+......++..|..++.+ +|.+..++....
T Consensus 97 ~p~~~--------------------~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~-----eR~~l~~~~~~~ 151 (473)
T PRK10429 97 AHLFE--------------------GTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKR-----EREQLVPYPRFF 151 (473)
T ss_pred CCCCC--------------------ccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHH-----HHHHHHHHHHHH
Confidence 21100 01134455556667788888888888899999885432 299999987777
Q ss_pred HHHHHHHHhhhhhhc----c---ccccchhHhHHHHHHHHHHHHHHH
Q 008158 184 FTVVILITQTVLVYI----Q---DSVSWVIGFGIPTVLMIGAIILFL 223 (575)
Q Consensus 184 ~~ig~~~~~~v~~~l----~---~~~gw~~~f~~~~~~~~i~~~~~~ 223 (575)
.++|+.+++.+...+ . +..+|+....+.+++.++..+..+
T Consensus 152 ~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~ 198 (473)
T PRK10429 152 ASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITL 198 (473)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 788766665444322 1 123566665555554444444333
No 99
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.72 E-value=2.1e-16 Score=158.78 Aligned_cols=149 Identities=11% Similarity=0.061 Sum_probs=135.1
Q ss_pred hhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccC
Q 008158 47 EYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCK 126 (575)
Q Consensus 47 ~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (575)
.++-++++.|++.+.+.+.+.+..++.|.+.|| +|+|-.+++|+.++...++++++..
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~-iGy~ipm~~Gl~vmf~sTilFafg~--------------------- 157 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDR-IGYKIPMVAGLFVMFLSTILFAFGN--------------------- 157 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHH-hccccHHHHHHHHHHHHHHHHHHcc---------------------
Confidence 456678999999999999999999999999999 5999999999999999999999976
Q ss_pred CCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhhhccccccchh
Q 008158 127 SANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVI 206 (575)
Q Consensus 127 ~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~ 206 (575)
+++.++++|.++|+|.++...+..++++|.||+++ +|++++++.-.+..+|-++||..||.+-+..|.+.
T Consensus 158 -----sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~-----er~~vmGialgfislG~lvgPpfGGilYe~~Gk~a 227 (464)
T KOG3764|consen 158 -----SYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDN-----ERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSA 227 (464)
T ss_pred -----hhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccch-----hhhHHHHHHHHHHhccceecCCcccchHhhcCCcC
Confidence 67789999999999999999999999999999876 49999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHhccc
Q 008158 207 GFGIPTVLMIGAIILFLVGKK 227 (575)
Q Consensus 207 ~f~~~~~~~~i~~~~~~~~~~ 227 (575)
+|++.++..++-..+-++..+
T Consensus 228 PFlVL~~v~Lld~~L~l~vi~ 248 (464)
T KOG3764|consen 228 PFLVLAIVLLLDGALQLLVIE 248 (464)
T ss_pred cHHHHHHHHHHHHHHHHheeC
Confidence 999988777776666554433
No 100
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.72 E-value=2.3e-15 Score=165.43 Aligned_cols=142 Identities=13% Similarity=0.021 Sum_probs=127.2
Q ss_pred hhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCcc
Q 008158 46 KEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQC 125 (575)
Q Consensus 46 ~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (575)
+..+.+.....+..+++.++..+++++.|+++|| +|||++++++.++.+++.+..+++.
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~-~GRk~~~~~~~~~~~i~~~~~a~a~-------------------- 169 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDR-FGRKPVLLVSLLLFIIFGILTAFAP-------------------- 169 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhh-cccHHHHHHHHHHHHHHHHHHHHhC--------------------
Confidence 5567788889999999999999999999999999 5999999999999999999999987
Q ss_pred CCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhhhccccccch
Q 008158 126 KSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWV 205 (575)
Q Consensus 126 ~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~ 205 (575)
+++.+++.|++.|++.++...+...+++|.+++++ |+.+..+ ......++.+++.+++++.. +||
T Consensus 170 ------~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~------R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr 234 (521)
T KOG0255|consen 170 ------NYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQ------RGLALTL-GGFFFVGGLMLPAGAAYITR--DWR 234 (521)
T ss_pred ------cHHHHHHHHHHHHhhccchhHHhHhhheeecCcch------hhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHH
Confidence 78889999999999999999999999999999988 9999999 77778888889999998877 899
Q ss_pred hHhHHHHHHHHHHHHHHH
Q 008158 206 IGFGIPTVLMIGAIILFL 223 (575)
Q Consensus 206 ~~f~~~~~~~~i~~~~~~ 223 (575)
+.+++..+...+.++..+
T Consensus 235 ~~~~~~~~~~~~~~~~~~ 252 (521)
T KOG0255|consen 235 WLFWIISIPSGLFLLLWF 252 (521)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999987776665555533
No 101
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.71 E-value=7.1e-15 Score=155.36 Aligned_cols=177 Identities=11% Similarity=-0.015 Sum_probs=115.3
Q ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHH--HHHHHHHHHHHhhhh-HHHhhhcccchHHHHHHHHHHH
Q 008158 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANI--LNIWGGVTNFAPLLG-AFISDTYIGRFKTITFASIAAI 95 (575)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i--~~~~~~~~~~~~~~~-G~laD~~~Grr~~~~~~~~l~~ 95 (575)
...+.+..+...+.+....+.+|.|++ +.|.|.++.|.. .+.......+.+|+. ++..||+ ||||..++.+.+..
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~-~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~-g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLR-EDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRL-GRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-CcchhHHHHHHHHH
Confidence 344556667777776656677777776 569999999997 456677776777666 6689995 99998765553322
Q ss_pred H-HHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchh
Q 008158 96 L-GMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGIN 174 (575)
Q Consensus 96 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 174 (575)
. .....+... +. .....++.....+.++..+..-+...++..|..++++ ++
T Consensus 81 ~~~~~~~~~~~--~~--------------------~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~------~~ 132 (390)
T TIGR02718 81 SACLASLALVG--PD--------------------VAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRT------LA 132 (390)
T ss_pred HHHHHHHHcCC--cc--------------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hh
Confidence 2 222222111 00 0012233444444555555555555556666665544 67
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhc
Q 008158 175 SFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVG 225 (575)
Q Consensus 175 ~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~ 225 (575)
...+...++..+|..+|+.+.+++.+.+|||..|++.+++.++..+..++.
T Consensus 133 ~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~ 183 (390)
T TIGR02718 133 KGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWL 183 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc
Confidence 777778888889999999888899988999999998887666555554443
No 102
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.70 E-value=7.1e-21 Score=204.98 Aligned_cols=140 Identities=14% Similarity=0.198 Sum_probs=116.9
Q ss_pred hhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchh
Q 008158 53 TSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQ 132 (575)
Q Consensus 53 ~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (575)
...+++.+...++..++.+++|+++||+ |||++++.+..+..++.++.++++.. .+
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~-GRk~~~~~~~~~~~i~~~~~~~~~~~-----------------------~~ 101 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRY-GRKPALIISALLMIIGSILIAFAPSY-----------------------NN 101 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccc-cccccccccccccccccccccccccc-----------------------cc
Confidence 3468899999999999999999999995 99999999999999999999887521 14
Q ss_pred hHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhhhccc---cccchhHhH
Q 008158 133 LGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQD---SVSWVIGFG 209 (575)
Q Consensus 133 ~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~---~~gw~~~f~ 209 (575)
...+.++|++.|+|.|+..+..+.++.|..|++. |+...++.+.+..+|..++..++-.+.+ ..+||+.+.
T Consensus 102 ~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~------R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~ 175 (451)
T PF00083_consen 102 FWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKH------RGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLI 175 (451)
T ss_pred cccccccccccccccccccccccccccccccccc------cccccccccccccccccccccccccccccccccccccccc
Confidence 5679999999999999999999999999999987 9999999999999998888766543332 245999998
Q ss_pred HHHHHHHHHHHHH
Q 008158 210 IPTVLMIGAIILF 222 (575)
Q Consensus 210 ~~~~~~~i~~~~~ 222 (575)
+..+..++.++..
T Consensus 176 ~~~~~~l~~~~~~ 188 (451)
T PF00083_consen 176 FGAIPSLLVLLLR 188 (451)
T ss_pred ccccccccccccc
Confidence 8777655444433
No 103
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.70 E-value=1.4e-14 Score=156.74 Aligned_cols=372 Identities=11% Similarity=0.065 Sum_probs=218.6
Q ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhccc-----chHHHHHHHHH
Q 008158 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIG-----RFKTITFASIA 93 (575)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~G-----rr~~~~~~~~l 93 (575)
...+.+..+...+. +.+...+.+++++++|++.++.+...+...+...+-++ +|.++||+ + ||+.++++.++
T Consensus 28 ~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~-~i~G~rRr~~l~~~~~l 104 (468)
T TIGR00788 28 LAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTF-PLFGYTKRWYLVLSGLL 104 (468)
T ss_pred HHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhc-CCCCccchHHHHHHHHH
Confidence 34445577888887 77888899999999999999999999999999888766 89999995 7 66777776655
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccch
Q 008158 94 AILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGI 173 (575)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 173 (575)
.. ......++. + +.......+.+++.+++.+..-.+.-++..|..+ +++ +.+
T Consensus 105 ~~-~~~~~~l~~--~---------------------~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~---~~~ 156 (468)
T TIGR00788 105 GS-AILYGLLPG--K---------------------VSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESP---SAG 156 (468)
T ss_pred HH-HHHHHhccc--c---------------------cchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCC---CcC
Confidence 53 122222221 0 0123334457788999999988999999999998 331 234
Q ss_pred hhhhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhccceEEeeCCCCCcchhHHHHHHHHHHhh
Q 008158 174 NSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQVLVAAYKKR 253 (575)
Q Consensus 174 ~~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (575)
+...++.+.+.++|..+|+.++|++.+.++|+..|++.+++.++..+..++.+++.....|+..+..... +...
T Consensus 157 ~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~~------~~~~ 230 (468)
T TIGR00788 157 PSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYLEMN------MALL 230 (468)
T ss_pred CCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHhcccccccccccccccchhh------hhhh
Confidence 5567777777889999999999999998899999998777666554433433322100111100000000 0000
Q ss_pred cccCCCCCCCCCccccCCCCcccccccCCCcchhhhhhhhhhhccCCCCCCCCCCCCccccchhhHHHhH------hhhh
Q 008158 254 RLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEV------KCLI 327 (575)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 327 (575)
.. ...+. ..+...+. +.++
T Consensus 231 ---~~-----------------------------~~~~~-----------------------~~~~~~~l~~~l~~~~i~ 255 (468)
T TIGR00788 231 ---TL-----------------------------GVLAN-----------------------VKVQILGLRGAIQLLEIA 255 (468)
T ss_pred ---hh-----------------------------hHHHH-----------------------HHHHHHHHHHHHhcHHHH
Confidence 00 00000 00000011 1111
Q ss_pred hhHHHHHHHHHHHHhhcccc-ceeeeecccccccCCCccccCccccccc---hhHhhHhhhhcccchhHHHhhhhhcCCC
Q 008158 328 KIIPIWAAGIISLTSISQQG-TFTVSQAMKMNRHLGPKFQIPPGTVGVI---SMITIGLWLPFYDTVLVPALRKITKHEG 403 (575)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~-t~~~~~~~~~~~~~~~~~~~~~~~~~~i---~~~~~~i~~~~~~~~~~~~~~r~~~r~~ 403 (575)
..+. +..+.+....... +.+..+. ...+ .++...+.+ ..++.++...+ .+|+.+|
T Consensus 256 ~~l~---fifl~~~~~~~~~~~~f~~~~----~~lG----~s~~~~G~~~~~~~v~~i~g~~~--------~~~~~~~-- 314 (468)
T TIGR00788 256 KPLI---FIFLSYANLPGASGSVFCATT----QCLP----GGPSFSGMSKVVGNLGSLCGVGG--------YDRFLKT-- 314 (468)
T ss_pred HHHH---HHHHHHhhcCCCCceeEEEEc----ccCC----CCcchhhhHHHHHHHHHHHHHHH--------HHHHHhh--
Confidence 1111 1111011111111 1111111 1122 233333332 33333333332 4444433
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHHH
Q 008158 404 GITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIA 483 (575)
Q Consensus 404 ~~~~~~~i~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~ 483 (575)
.+.++.+.++.++.+++.+........ ... ..+ ..+.+......++.+++.++...+...++.+..|++.+|+.
T Consensus 315 -~~~r~~l~~~~~l~~~~~~~~~~l~~~-~~~--~~g--i~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~ 388 (468)
T TIGR00788 315 -FPYRLLFGVTTLLYTLSSLFDLILVKR-WNL--AFG--ISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSV 388 (468)
T ss_pred -CCHHHHHHHHHHHHHHHHhCceeeeec-ccc--ccC--CCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehH
Confidence 356677777777777766443221100 000 000 01122333445677888889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhc
Q 008158 484 NSLLFCSFGFASYLSSLLITIVHGVT 509 (575)
Q Consensus 484 ~g~~~~~~~lg~~l~~~l~~~i~~~~ 509 (575)
.++.++..++|..+++.+.+.+.+..
T Consensus 389 ~al~~s~~~lg~~v~~~~gg~l~~~~ 414 (468)
T TIGR00788 389 FALLASILHLGSSVSGFLGVLLMETI 414 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999998888764
No 104
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.69 E-value=3.5e-14 Score=149.75 Aligned_cols=385 Identities=11% Similarity=0.076 Sum_probs=202.5
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHH
Q 008158 22 ILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTV 101 (575)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~ 101 (575)
+....++....+-...++++.|+++ .|+|..|.|.+.++..+...+.+++.|+++||+..+||.+.+..++..+.....
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~ 85 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL 85 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH
Confidence 3344455545544566788888885 679999999999999999999999999999996346777776666666655555
Q ss_pred HHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHH
Q 008158 102 TLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYY 181 (575)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 181 (575)
...+ +.+.+++..++..+......|...++..+...+ ++.-++-..
T Consensus 86 ~~~~--------------------------~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~--------~~~~YG~iR 131 (400)
T PF03825_consen 86 AFSS--------------------------SFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGD--------RGKDYGRIR 131 (400)
T ss_pred HHhc--------------------------cHHHHHHHHHHHHHHHccHHHHHHHHHHHHccc--------ccCCCCcch
Confidence 4433 445566666667777777777777776666553 222233333
Q ss_pred HHHHHHHHHHhhh-hhhccccc---cchhHhHHHHHHHHHHHHHHHhccceEEeeCCCCCcchhHHHHHHHHHHhhcccC
Q 008158 182 TTFTVVILITQTV-LVYIQDSV---SWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQVLVAAYKKRRLTL 257 (575)
Q Consensus 182 ~~~~ig~~~~~~v-~~~l~~~~---gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (575)
...++|..++... ++++.... +..+.+++.+...++.....+. .|+.+.++..++..+
T Consensus 132 lwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l~-lp~~~~~~~~~~~~~----------------- 193 (400)
T PF03825_consen 132 LWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFALF-LPKTPPKRSAKESVK----------------- 193 (400)
T ss_pred hhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHh-CCCCccccccCCCcc-----------------
Confidence 3344555544322 12222211 2234455554433322222222 222110000000000
Q ss_pred CCCCCCCCccccCCCCcccccccCCCcchhhhhhhhhhhccCCCCCCCCCCCCccccchhhHHHhHhhhhhhHHHHHHHH
Q 008158 258 PQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKCLIKIIPIWAAGI 337 (575)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (575)
+. . ..| .+ +..++++.+.-.+..++...
T Consensus 194 ~~----~------------------------~~~-------------------~~-----~llk~~~~~~Fll~~~l~~~ 221 (400)
T PF03825_consen 194 KL----L------------------------GLD-------------------AL-----KLLKNPRFLVFLLAAFLIGI 221 (400)
T ss_pred cc----c------------------------chH-------------------HH-----HHhcCccHHHHHHHHHHHHH
Confidence 00 0 000 00 00001111110111111111
Q ss_pred HHHHhhccccceeeeecccccccCCCccccC-ccccccchhHhhHhhhhcccchhHHHhhhhhcCCCCCChHHHHHHHHH
Q 008158 338 ISLTSISQQGTFTVSQAMKMNRHLGPKFQIP-PGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMI 416 (575)
Q Consensus 338 ~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~i~~~~~~~~~~~~~~r~~~r~~~~~~~~~i~ig~~ 416 (575)
.... +..+.+.+ .+... +.... .+....+..+. +-...-..+|+-+| .+..+.+.++.+
T Consensus 222 ~~~~-~~~f~~~y------l~~~g--g~~~~~~g~~~~l~~~a--------Ei~~f~~~~~~~~r---~g~~~ll~~a~~ 281 (400)
T PF03825_consen 222 SHAA-YYTFFSIY------LQELG--GYSGSTIGILWALGVVA--------EIPFFFFSGRFLKR---FGIKWLLLLALV 281 (400)
T ss_pred HHHH-HHHHHHHH------HHHcc--cchhhHHHHHHHHHHHH--------HHHHHHHHHHHHHh---cCHHHHHHHHHH
Confidence 1111 11111111 11111 10000 11111122222 22222235555555 356677777777
Q ss_pred HHHHHHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHHHHHHHHH-HHHHHH
Q 008158 417 FSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFC-SFGFAS 495 (575)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g~~~~-~~~lg~ 495 (575)
..++=..++...... ....+....+..++.|+..++.......|+.+.+|++.|++++++++. ...+|.
T Consensus 282 ~~~vR~~l~a~~~~~----------~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~ 351 (400)
T PF03825_consen 282 AYAVRWLLYAYFSDP----------WPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGG 351 (400)
T ss_pred HHHHHHHHHHHhcCC----------cHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHH
Confidence 766665555544110 001112223334578999999999999999999999999999999875 567999
Q ss_pred HHHHHHHHHhhhhcccCCCCCcccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 008158 496 YLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCARR 551 (575)
Q Consensus 496 ~l~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~v~~i~~~~~~~~ 551 (575)
.++..+.|++.|..+.+..- .+..++.+.+++.++..++++++.|+
T Consensus 352 ~iG~~igG~l~~~~g~~~~~----------~~~~~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 352 AIGSLIGGWLYDAFGARGMF----------DWSAVFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred HHHHHHHHHHHHHhcchhhh----------hHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 99999999999865322111 12345566677777776677666443
No 105
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.69 E-value=3.8e-15 Score=159.68 Aligned_cols=151 Identities=11% Similarity=0.041 Sum_probs=126.0
Q ss_pred HhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCC
Q 008158 44 LLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFG 123 (575)
Q Consensus 44 l~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (575)
+.+++|+...+.+.+.++|.+++.++.+++|.|.||+ .-.+.+....+++.+-.++....+
T Consensus 72 ~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~-~ls~~l~~~~~~w~~~~~~~~~~~------------------ 132 (495)
T KOG2533|consen 72 LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRF-PLSKGLSVSGILWGLFGFLTAAVH------------------ 132 (495)
T ss_pred CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHh------------------
Confidence 3478899999999999999999999999999999995 877777666666665554444444
Q ss_pred ccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhhhc-----
Q 008158 124 QCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYI----- 198 (575)
Q Consensus 124 ~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l----- 198 (575)
+.+.+++.|+++|+.+++..|+...+++.+|.++| |+.-+++++.+.++|.++|..+...+
T Consensus 133 --------s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e------~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~ 198 (495)
T KOG2533|consen 133 --------SFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSE------RGLRMGIWYASASLGNIFGGLIAYGVFKLNG 198 (495)
T ss_pred --------hhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhh------hhhhHHHHHHhcchhhHHHHHHHHHhhhhcC
Confidence 67779999999999999999999999999999988 99999999999999999999888764
Q ss_pred -cccccchhHhHHHHHHHHHHHHHHHhccc
Q 008158 199 -QDSVSWVIGFGIPTVLMIGAIILFLVGKK 227 (575)
Q Consensus 199 -~~~~gw~~~f~~~~~~~~i~~~~~~~~~~ 227 (575)
....||||.|++.+++.++..++.++..|
T Consensus 199 ~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp 228 (495)
T KOG2533|consen 199 SGGLAGWRWLFIIEGVITLVLGIVVFFFLP 228 (495)
T ss_pred CCCcCCceeehhHHHHHHHHHHheEEEEec
Confidence 33479999999988776665555544333
No 106
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.67 E-value=6.9e-15 Score=157.56 Aligned_cols=354 Identities=11% Similarity=0.036 Sum_probs=219.1
Q ss_pred HHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhh----hcccchHHH-HHHHHHHHHHHHHHHHH
Q 008158 30 RLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISD----TYIGRFKTI-TFASIAAILGMLTVTLT 104 (575)
Q Consensus 30 ~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD----~~~Grr~~~-~~~~~l~~~~~~~~~~~ 104 (575)
.+.+.....+++.|+.+.+|+++...+.+..+.-+...+..|+.|+++| | +||||.+ +.+.++..++.+++...
T Consensus 14 ~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr-~Grrrp~~l~g~i~~~~~~~llf~~ 92 (428)
T PF13347_consen 14 NMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTR-WGRRRPWILIGAILLALSFFLLFSP 92 (428)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeeccc-ccccceEeehhhHHHHHHHHHhhcc
Confidence 3444445678899999999999999999999999999999999999999 7 5977654 45667777776666643
Q ss_pred hhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHH
Q 008158 105 AWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTF 184 (575)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 184 (575)
. |. ..+.......+.+..++..++.........++..|..++.+ +|.+..++...+.
T Consensus 93 ~--p~----------------~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~-----~R~~l~~~~~~~~ 149 (428)
T PF13347_consen 93 P--PA----------------GLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPD-----ERTRLSSWRMIFS 149 (428)
T ss_pred c--cc----------------hhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHh-----hhhhHHHHHHHHH
Confidence 1 10 00001134455777777799999999999999999998643 3999999998888
Q ss_pred HHHHHHHhhhhhhcccc-------ccchhHhHHHHHHHHHHHHHHHhccceEEeeCCCCCcchhHHHHHHHHHHhhcccC
Q 008158 185 TVVILITQTVLVYIQDS-------VSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQVLVAAYKKRRLTL 257 (575)
Q Consensus 185 ~ig~~~~~~v~~~l~~~-------~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (575)
.+|.++...+.+.+.+. .+|++...+.+++..+..++.++..|+..++.+++++. .
T Consensus 150 ~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~~~-----------------~ 212 (428)
T PF13347_consen 150 MIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQEKK-----------------I 212 (428)
T ss_pred HHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeeccccccccccc-----------------c
Confidence 88887666565544321 16888888777766666655554434310000000000 0
Q ss_pred CCCCCCCCccccCCCCcccccccCCCcchhhhhhhhhhhccCCCCCCCCCCCCccccchhhHHHhHhhhhhhHHHHHHHH
Q 008158 258 PQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKCLIKIIPIWAAGI 337 (575)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (575)
+. .+ .++ +..+++ .+... .....
T Consensus 213 ~~------------------------------~~-------------------~~~----~~~~nr-~~~~l---~~~~~ 235 (428)
T PF13347_consen 213 SL------------------------------RD-------------------SLR----SLFRNR-PFRIL---LLAFF 235 (428)
T ss_pred cc------------------------------cc-------------------chh----hhcccc-hHHHH---HHHHH
Confidence 00 00 000 000011 11111 11111
Q ss_pred HHHHhhccccceeeeecccccccCCCccccCccccccchhHhhHhhhhcccchhHHHhhhhhcCCCCCChHHHHHHHHHH
Q 008158 338 ISLTSISQQGTFTVSQAMKMNRHLGPKFQIPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIF 417 (575)
Q Consensus 338 ~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~~~~~~r~~~r~~~~~~~~~i~ig~~~ 417 (575)
..+.......+.... +.+...+ ..-..+.+..+..+..++..++..+ +.+|+++| +.+.++..+
T Consensus 236 ~~~~~~~~~~~~~~y---~~~~vl~--~~~~~~~~~~~~~~~~~v~~~~~~~----l~~r~gk~-------~~~~~~~~~ 299 (428)
T PF13347_consen 236 LQWLAFALMNTFLPY---YFTYVLG--NEGLISIFMLIFFVASIVGSPLWGR----LSKRFGKK-------KVYIIGLLL 299 (428)
T ss_pred HHHhhhhhhhhHHHH---HHHHHhc--CchhhHHHHHHHHHHHHHHHHHHHH----HHHHccce-------eehhhhHHH
Confidence 111111111111111 1111111 0001122223344444555555433 47777665 347777777
Q ss_pred HHHHHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCc-------hhHHHHHHHHHHH
Q 008158 418 SILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPD-------HMKSIANSLLFCS 490 (575)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~-------~~rg~~~g~~~~~ 490 (575)
.+++.+...+.. ..+.+...+..++.|++.+......++...|..+. +..|...|++++.
T Consensus 300 ~~~~~~~~~~~~-------------~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~ 366 (428)
T PF13347_consen 300 AALGFLLLFFLG-------------PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFF 366 (428)
T ss_pred HHHHHHHHHHHH-------------hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhh
Confidence 777777766552 13666777888889999999999999988888863 4579999999999
Q ss_pred HHHHHHHHHHHHHHhhhhcc
Q 008158 491 FGFASYLSSLLITIVHGVTA 510 (575)
Q Consensus 491 ~~lg~~l~~~l~~~i~~~~~ 510 (575)
..++..++..+.+.+++..+
T Consensus 367 ~k~~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 367 IKIGQGLAGAIVGLLLALVG 386 (428)
T ss_pred hHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999887653
No 107
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.66 E-value=1.4e-14 Score=156.71 Aligned_cols=414 Identities=14% Similarity=0.097 Sum_probs=246.8
Q ss_pred HHHHHHHHHhhhhH---HHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHH
Q 008158 24 GNETFERLATIGLL---ANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLT 100 (575)
Q Consensus 24 ~~~~~~~~~~~~~~---~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~ 100 (575)
...|+-.+..+++. ..+-..+++++|.+.++.+|+.++......+..|+.+.+.||+ |.|++.+.|.++..+|.++
T Consensus 49 ~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf-g~R~v~i~G~~v~~~g~~l 127 (509)
T KOG2504|consen 49 FASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF-GCRTVMIAGGLVAALGLLL 127 (509)
T ss_pred HhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc-CchHHHHHHHHHHHHHHHH
Confidence 34444445545433 3567888899999999999999999999999999999999995 9999999999999999999
Q ss_pred HHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHH-HHHHHhccCCccccccccccCCCCCCcccccchhhhhHH
Q 008158 101 VTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGL-GLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNW 179 (575)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 179 (575)
..++. +.+.+++.- ++.|+|.|..+..+...++.+|++ +|+.+.++
T Consensus 128 ssF~~--------------------------~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~k-------kR~lA~Gi 174 (509)
T KOG2504|consen 128 SSFAT--------------------------SLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEK-------KRALATGI 174 (509)
T ss_pred HHHHh--------------------------hHHHHHHHHHHHhhccchhhhcchhhhhhhHhHH-------HHHHHHhh
Confidence 99987 455555554 567999999999999989977763 49999999
Q ss_pred HHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhccceEEeeCCCCCcchhHHHHHHHHHHhhcccCCC
Q 008158 180 YYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQVLVAAYKKRRLTLPQ 259 (575)
Q Consensus 180 ~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (575)
-..+..+|.++-|.+.-++.+.+|||+.+++-+.+.+-..+.....+|....+.+.+. .+. ++.....+.
T Consensus 175 a~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~--~~~--------~~~~~~~~~ 244 (509)
T KOG2504|consen 175 AVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEE--KDL--------RNSAASVES 244 (509)
T ss_pred hhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhh--hhh--------ccccccccc
Confidence 9998899999988899999999999999988776665555555555543222222100 000 000000000
Q ss_pred CCCCCCccccCCCCcccccccCCCcchhhhhhhhhhhccCCCCCCCCCCCCccccc---------hhhHHHhHhhhhhhH
Q 008158 260 GQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLC---------SIQQVEEVKCLIKII 330 (575)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~ 330 (575)
... +...+.......+.+ ....+...... ....|+.. +.+..++++.+...+
T Consensus 245 ---~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~ 305 (509)
T KOG2504|consen 245 ---TPK-----PVELRISERDSGLKK-LSLSNLATLKR----------GPDKWRNSPLQAFLSMLDLSLLKDPKFLLLAL 305 (509)
T ss_pred ---ccc-----ccccccccCCCCCCc-ccccchhhhhh----------CCccccccchhhhhhhhhHHHHcCchHHHHHH
Confidence 000 000000000000000 00000000000 00001100 001111111111011
Q ss_pred HHHHHHHHHHHhhccccceeeeecccccccCCCcccc-CccccccchhHhhHhhhhcccchhHHHhhhhhcCCCCCChHH
Q 008158 331 PIWAAGIISLTSISQQGTFTVSQAMKMNRHLGPKFQI-PPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQ 409 (575)
Q Consensus 331 ~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~i~~~~~~~~~~~~~~r~~~r~~~~~~~~ 409 (575)
...+....+.......+. +.+ .. +++. ..+...++..+..+++-++..++ .|+-. .+...
T Consensus 306 ~~~~~~~g~~~p~~~l~~-------~~~-~~--g~~~~~aa~l~Siigi~~i~gRi~~G~l----aD~~~-----~~~~~ 366 (509)
T KOG2504|consen 306 SNLFAYLGFNVPFVYLPS-------YAK-SL--GLSSNDAAFLLSIIGVSDIIGRIILGLL----ADKPG-----IRALV 366 (509)
T ss_pred HHHHHHHHHHHHHHHHHH-------HHh-hc--CCChhhhHHHHHHHHHhhhhhhhhhhhh----cCccc-----cchHH
Confidence 111111111111111111 111 11 1100 11112223333333333332222 44422 24556
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHHHHHHHHH
Q 008158 410 RIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFC 489 (575)
Q Consensus 410 ~i~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g~~~~ 489 (575)
...++++..+++.++.... .+++.++...+++|++.+...........+..+.+.-+.+.|+..+
T Consensus 367 ~~~~~ll~~gl~~~~~p~~---------------~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~ 431 (509)
T KOG2504|consen 367 LFLLTLLIAGLARLFLPFA---------------TTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLL 431 (509)
T ss_pred HHHHHHHHHHHHHHHHHHh---------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHH
Confidence 6777777777777555544 3556667777888998888888888889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhcccCCCCCcccCCCCcchhHHHHHHHHHHHHHHHHHHHHHH
Q 008158 490 SFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCA 549 (575)
Q Consensus 490 ~~~lg~~l~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~v~~i~~~~~~ 549 (575)
...++..+++.+.+++.|.+ . .|+..|...++..+++.++.++..
T Consensus 432 ~~gi~~l~gpPiag~~~d~t-----g----------~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 432 FQGIGALVGPPIAGLLYDIT-----G----------NYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HhHHHHHcCcccceeeeecc-----C----------CeeeehhhcChHHHHHHHHHHHhH
Confidence 99999999999999887754 1 245677777888777766666554
No 108
>PTZ00207 hypothetical protein; Provisional
Probab=99.66 E-value=2.1e-13 Score=148.94 Aligned_cols=153 Identities=16% Similarity=0.069 Sum_probs=119.3
Q ss_pred HHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 008158 38 ANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDV 117 (575)
Q Consensus 38 ~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 117 (575)
....+.+++++|+|.++.+++.++.. ....+.+++|+++||+ |||+++.++.+++.+++++++++.+.. +
T Consensus 47 sv~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~-G~R~vllig~ll~~iG~ll~ala~~~~-i------- 116 (591)
T PTZ00207 47 NLISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYL-GPRPIFVLSMTVFCLGTLLFALTFQEV-I------- 116 (591)
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHhccc-c-------
Confidence 45667889999999999999987743 3445677889999995 999999999999999999999863100 0
Q ss_pred CCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHH-Hhhhhh
Q 008158 118 AKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILI-TQTVLV 196 (575)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~-~~~v~~ 196 (575)
..+.+.+++.|++.|+|.+...+.....+.++|| ++ |+.+.++...+..+|+.+ +++..+
T Consensus 117 ------------~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~------RG~a~Gi~~~~~gLGsaI~~~l~~~ 177 (591)
T PTZ00207 117 ------------EGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SN------RGAVVAIMKTFTGLGSAILGSIQLA 177 (591)
T ss_pred ------------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hh------hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1267889999999999999888888889999997 44 899999999999999975 555555
Q ss_pred hccccccchhHhHHHHHHHHHHHHH
Q 008158 197 YIQDSVSWVIGFGIPTVLMIGAIIL 221 (575)
Q Consensus 197 ~l~~~~gw~~~f~~~~~~~~i~~~~ 221 (575)
++. .+|+..|++.++..++..++
T Consensus 178 l~~--~~~~~~fl~l~vl~~vv~ll 200 (591)
T PTZ00207 178 FFS--DNTSAYFFFLMSFALVVGIL 200 (591)
T ss_pred HHH--HhHHHHHHHHHHHHHHHHHH
Confidence 554 35777777665554444333
No 109
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.64 E-value=1.8e-13 Score=136.68 Aligned_cols=345 Identities=11% Similarity=0.128 Sum_probs=228.6
Q ss_pred cchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHH
Q 008158 16 WKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAI 95 (575)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~ 95 (575)
|-.+.-+++..+--|... .-...+...+++++|+|.+++|.+++...+...+.++++.+++.| +|-++.+..++++..
T Consensus 11 ~~li~gIvlia~NLR~~i-tsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~-~g~er~l~~~Llli~ 88 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAI-TSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARR-FGEERSLFLALLLIA 88 (395)
T ss_pred hHHHHHHHHHHhccchhh-hhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HhhHHHHHHHHHHHH
Confidence 444455555565566653 344567778899999999999999999999999999999999999 599999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhh
Q 008158 96 LGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINS 175 (575)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 175 (575)
+|..+=... +...++.+-.+.|.|.+......++.+-+.||++ -+.
T Consensus 89 ~G~~iR~~~---------------------------~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-------~~~ 134 (395)
T COG2807 89 AGILIRSLG---------------------------GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-------VGL 134 (395)
T ss_pred HHHHHHhcc---------------------------cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-------hhh
Confidence 998886653 3456899999999999999999999999999964 599
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhccccc-cchhHhHHHHHHHHHHHHHHHhccceEEeeCCCCCcchhHHHHHHHHHHhhc
Q 008158 176 FFNWYYTTFTVVILITQTVLVYIQDSV-SWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQVLVAAYKKRR 254 (575)
Q Consensus 176 ~~~~~~~~~~ig~~~~~~v~~~l~~~~-gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (575)
.++.|....++|+.+++.+...+.++. |||....+=+...++++++++.-..+.. .+....
T Consensus 135 mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq~~r~~--~~~~~~---------------- 196 (395)
T COG2807 135 MTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQALREQ--AASIAT---------------- 196 (395)
T ss_pred HHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhccccc--cccccc----------------
Confidence 999999999999999999888887766 7998887777777777777665322111 010000
Q ss_pred ccCCCCCCCCCccccCCCCcccccccCCCcchhhhhhhhhhhccCCCCCCCCCCCCccccchhhHHHhHhhhhhhHHHHH
Q 008158 255 LTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKCLIKIIPIWA 334 (575)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (575)
+. .+ ...-|+ +...+...+.+-.
T Consensus 197 ---~~---~~-------------------------------------------~~~vw~--------~~~aW~vtLfmGl 219 (395)
T COG2807 197 ---KL---VS-------------------------------------------VRKVWR--------SPLAWQVTLFMGL 219 (395)
T ss_pred ---cc---cc-------------------------------------------cccccc--------CchhHHHHHHHHh
Confidence 00 00 000111 1111111222334
Q ss_pred HHHHHHHhhccccceeeeecccccccCCCccccCccccccc---hhHhhHhhhhcccchhHHHhhhhhcCCCCCChHHHH
Q 008158 335 AGIISLTSISQQGTFTVSQAMKMNRHLGPKFQIPPGTVGVI---SMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRI 411 (575)
Q Consensus 335 ~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~i---~~~~~~i~~~~~~~~~~~~~~r~~~r~~~~~~~~~i 411 (575)
....+|+...+.+.....+. ++... .+..-.+ ..+...+.+|. +.+|.++ .+...
T Consensus 220 qS~~~Y~~~~WLP~ili~~G--~sa~~-------aG~llsl~~l~~~~~~ll~P~-------la~R~~n------~r~~~ 277 (395)
T COG2807 220 QSLLYYIVIGWLPAILIDRG--LSAAE-------AGSLLSLMQLAQLPTALLIPL-------LARRSKN------QRPLV 277 (395)
T ss_pred hHHHHHHHHHHHHHHHHHcC--CCHHH-------hhhHHHHHHHHHHHHHHHHHH-------HHHHhcc------cchHH
Confidence 45566777777666554332 11111 1111111 12222222332 2444322 22333
Q ss_pred HHHHHHHHHHHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCC-chhHHHHHHHHHHH
Q 008158 412 GIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFP-DHMKSIANSLLFCS 490 (575)
Q Consensus 412 ~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p-~~~rg~~~g~~~~~ 490 (575)
......+.++.+.+.+.. .+..+++ .+++|+|.+..+|....++.+..+ ++..+.-.|+.+..
T Consensus 278 ~~~~~~~l~G~~G~~~~P------------~~~~~lw----~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~ 341 (395)
T COG2807 278 VLALLLMLVGLVGLLLAP------------GQLPILW----ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGV 341 (395)
T ss_pred HHHHHHHHHHHHHHHHhh------------hhHHHHH----HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhh
Confidence 444444444444443331 1112222 377899999999999998877665 56677788888889
Q ss_pred HHHHHHHHHHHHHHhhhhc
Q 008158 491 FGFASYLSSLLITIVHGVT 509 (575)
Q Consensus 491 ~~lg~~l~~~l~~~i~~~~ 509 (575)
+.+-..++|.+.|++.|.+
T Consensus 342 GYllAa~GP~l~G~lhDa~ 360 (395)
T COG2807 342 GYLLAAFGPWLFGFLHDAT 360 (395)
T ss_pred hHHHHhhhhhhHhHHHHhc
Confidence 9999999999999999976
No 110
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.62 E-value=7.8e-14 Score=145.12 Aligned_cols=385 Identities=11% Similarity=0.050 Sum_probs=207.2
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHH--HH
Q 008158 20 PYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAI--LG 97 (575)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~--~~ 97 (575)
+......++-.+++-...++++.++++..|+|.++.|.+.++..+...+.+|+.|.++||. |.||-++....... .+
T Consensus 10 ~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dkl-g~kK~Ll~~i~~l~~l~~ 88 (412)
T PF01306_consen 10 WWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKL-GLKKHLLWFIAILLLLFG 88 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHC-TTCSHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchh-hhhHHHHHHHHHHHHHHH
Confidence 3333344444444445678999999999999999999999999999999999999999995 97775544433322 22
Q ss_pred HHHH-HHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhh
Q 008158 98 MLTV-TLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSF 176 (575)
Q Consensus 98 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 176 (575)
.+.. .+.+.+.. + +.++.++.|+..+.......+ +.|.+-++. .++.+.=
T Consensus 89 pff~~v~~pll~~----------------------n---~~lg~iig~i~l~~~f~~~~~-~~Ea~~er~---sr~~~fe 139 (412)
T PF01306_consen 89 PFFIYVFGPLLQS----------------------N---FWLGAIIGGIYLGLVFNAGVP-LSEAYAERV---SRRNGFE 139 (412)
T ss_dssp HHHHHTHHHHHHT----------------------T----HHHHHHTTTTTTTTTTTHHH-HHHHHHHHH---HHHHSS-
T ss_pred HHHHHHHHHHHHH----------------------H---HHHHHHHHHHHHHHHHcccch-HHHHHHHHH---HHHhcCC
Confidence 2222 11110000 1 233333434444443333333 224332211 1223333
Q ss_pred hHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhccceEEeeCCCCCcchhHHHHHHHHHHhhccc
Q 008158 177 FNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQVLVAAYKKRRLT 256 (575)
Q Consensus 177 ~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (575)
++-......+|.+++..++|++.+ .+-+..||+.....++..++.+..++..+++.+..+
T Consensus 140 YG~~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~------------------- 199 (412)
T PF01306_consen 140 YGRARMWGSIGFAIASLLAGILFN-INPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVAD------------------- 199 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SST-------------------
T ss_pred cchHHHHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhc-------------------
Confidence 455556678999999999998876 456678887665555444444443332111000000
Q ss_pred CCCCCCCCCccccCCCCcccccccCCCcchhhhhhhhhhhccCCCCCCCCCCCCccccchhhHHHhHhhhhhhHHHHHHH
Q 008158 257 LPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKCLIKIIPIWAAG 336 (575)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (575)
.. +.++.+.......+....++++....+....
T Consensus 200 -------~~----------------------------------------~~~~~~~~~~~~~~l~k~~~fw~~~l~v~g~ 232 (412)
T PF01306_consen 200 -------AL----------------------------------------GAKKDKVSLKDVLSLFKMRNFWFFVLFVIGV 232 (412)
T ss_dssp -------TS----------------------------------------SS------HHHHHHHTTSHHHHHHHHHHHHH
T ss_pred -------cc----------------------------------------ccCCCCCcHHHHHHHhcchhHHHHHHHHHHH
Confidence 00 0000000000000001112223222222222
Q ss_pred HHHHHhhccccc-eeeeecccccccCCCccccCccccccchh---HhhHhhhhcccchhHHHhhhhhcCCCCCChHHHHH
Q 008158 337 IISLTSISQQGT-FTVSQAMKMNRHLGPKFQIPPGTVGVISM---ITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIG 412 (575)
Q Consensus 337 ~~~~~~~~~~~t-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~i~~~~~~~~~~~~~~r~~~r~~~~~~~~~i~ 412 (575)
...+..+.|+.+ ++..+.. +.. .....++.++. +.-++...+ ...+.+|++ .++.+.
T Consensus 233 ~~~Y~vfdqqf~~y~~~~f~--~~~------~g~~~~G~l~s~~v~~E~~~m~~----~p~li~rig-------~k~~Ll 293 (412)
T PF01306_consen 233 AAIYDVFDQQFPIYFASFFQ--SAG------QGNQMYGYLWSVQVFLEALMMFF----SPWLINRIG-------AKNLLL 293 (412)
T ss_dssp HHHHHHHHHHHHHHHHHTSS--SHH------HHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHH--------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhc--ccc------cChhHHhHHHHHHHHHHHHHHHH----HHHHHHhcC-------hHhHHH
Confidence 233333333322 2211100 000 11111222222 222222221 222366654 445566
Q ss_pred HHHHHHHHHHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHHHHHHH-HHHH
Q 008158 413 IGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLL-FCSF 491 (575)
Q Consensus 413 ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g~~-~~~~ 491 (575)
++..++.+=.+.++.. .+++.+++.-.+.++-..+......-|+.+.+|++..++...+. +...
T Consensus 294 lag~i~~iRi~~~~~~---------------~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~ 358 (412)
T PF01306_consen 294 LAGVIMAIRIIGSGFA---------------TNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAK 358 (412)
T ss_dssp HHHHHHHHHHHHHHT-----------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTH
T ss_pred HHHHHHHHHHHHHhhh---------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHH
Confidence 6666666555555543 46667777788999999999999999999999999999999985 5888
Q ss_pred HHHHHHHHHHHHHhhhhcccCCCCCcccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 008158 492 GFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCARR 551 (575)
Q Consensus 492 ~lg~~l~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~v~~i~~~~~~~~ 551 (575)
++|..+.+.+.|.+.|.. |++..|++++.+.++..++..+..++
T Consensus 359 ~~~~~i~s~~~G~lyd~~----------------G~~~tylimg~iv~~~~li~~f~l~~ 402 (412)
T PF01306_consen 359 QIGIIILSPLAGYLYDRI----------------GFQHTYLIMGLIVLPFTLISAFTLKK 402 (412)
T ss_dssp HHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred HHHHHHHhhhHHhhHhhc----------------CcHHHHHHHHHHHHHHHHHheeeecC
Confidence 999999999999999865 66778999898888777776666443
No 111
>PRK11462 putative transporter; Provisional
Probab=99.62 E-value=2.9e-13 Score=146.26 Aligned_cols=171 Identities=10% Similarity=0.137 Sum_probs=119.7
Q ss_pred HHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhc---ccchHHHH-HHHHHHHHHHHHHHH
Q 008158 28 FERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTY---IGRFKTIT-FASIAAILGMLTVTL 103 (575)
Q Consensus 28 ~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~---~Grr~~~~-~~~~l~~~~~~~~~~ 103 (575)
...+.+..+..+++.|+.+.+|+++..+|.+..+.-+...+.-|+.|+++||. +||||..+ .+.+.+.++.+++..
T Consensus 20 ~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~ 99 (460)
T PRK11462 20 ASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYS 99 (460)
T ss_pred hhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHh
Confidence 33444445567899999999999999999999999999999999999999973 58876554 555666666655543
Q ss_pred HhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHH
Q 008158 104 TAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTT 183 (575)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 183 (575)
. |.. +.......+.+.-++..++..+......++.+|..++.+ +|++..++...+
T Consensus 100 ~---p~~-----------------s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~-----eRt~l~s~r~~~ 154 (460)
T PRK11462 100 T---PDL-----------------SMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPT-----QRISLQSWRFVL 154 (460)
T ss_pred C---CCC-----------------CcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHH-----HHHHHHHHHHHH
Confidence 2 210 001124455666666788888888888899999987543 399999999999
Q ss_pred HHHHHHHHhhhhhhcccc-------ccchhHhHHHHHHHHHHHHHHH
Q 008158 184 FTVVILITQTVLVYIQDS-------VSWVIGFGIPTVLMIGAIILFL 223 (575)
Q Consensus 184 ~~ig~~~~~~v~~~l~~~-------~gw~~~f~~~~~~~~i~~~~~~ 223 (575)
.++|..+++.+...+.+. .+|+....+.+++.++...+.+
T Consensus 155 ~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~ 201 (460)
T PRK11462 155 ATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCF 201 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 999988887665433222 3566655555554444444433
No 112
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.59 E-value=1.8e-13 Score=136.01 Aligned_cols=163 Identities=11% Similarity=0.043 Sum_probs=124.8
Q ss_pred HHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHh
Q 008158 26 ETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTA 105 (575)
Q Consensus 26 ~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~ 105 (575)
.+++..........+.+-++...+.+..+...++.....+..+++-.+|.++|+ +|||+.+........+..++.+.+.
T Consensus 86 gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~-~grr~~f~~T~l~t~v~~~is~~sp 164 (528)
T KOG0253|consen 86 GWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADT-IGRRKGFNLTFLVTGVFGVISGASP 164 (528)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhh-hhcchhhhhhHHHHHHHHHhhcCCC
Confidence 333434434445556666777788999999999999999999999999999999 5999999877777666666666544
Q ss_pred hcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHH
Q 008158 106 WLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFT 185 (575)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 185 (575)
++.++.+.|.+.|+|.|+ .|...++-.|..|..+ |....-.. ....
T Consensus 165 --------------------------nf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~------r~~~~V~~-~~wa 210 (528)
T KOG0253|consen 165 --------------------------NFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSH------RWLLTVMS-FFWA 210 (528)
T ss_pred --------------------------CeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcC------CCcchhHH-HHHH
Confidence 677899999999999999 8888999999998766 67666665 6678
Q ss_pred HHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHH
Q 008158 186 VVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFL 223 (575)
Q Consensus 186 ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~ 223 (575)
+|.++...+.=......||||..........+.....+
T Consensus 211 ig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~ 248 (528)
T KOG0253|consen 211 IGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFLV 248 (528)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHh
Confidence 88888877765556778999887766654444444433
No 113
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.56 E-value=4.3e-12 Score=133.48 Aligned_cols=369 Identities=11% Similarity=0.082 Sum_probs=219.9
Q ss_pred CCcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhc---ccchH-HHHH
Q 008158 14 GGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTY---IGRFK-TITF 89 (575)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~---~Grr~-~~~~ 89 (575)
-.+|+-.---...+...+.+-.+..++..|.++..|++...+|.+..+.=+..++.-|+.|.+.||. +|||| -++.
T Consensus 9 Ls~~eki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~ 88 (467)
T COG2211 9 LSLKEKIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLW 88 (467)
T ss_pred ccHHHHHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHH
Confidence 3344333323334444455556778899999999999999999999999999999999999999975 47665 5555
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCccc
Q 008158 90 ASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEG 169 (575)
Q Consensus 90 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~ 169 (575)
+.+.+++...++..+.+... .......++.-.+.+++...+.....++.+++.++.+
T Consensus 89 g~ip~~i~~~l~F~~p~~~~--------------------~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~--- 145 (467)
T COG2211 89 GAIPFAIVAVLLFITPDFSM--------------------TGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQ--- 145 (467)
T ss_pred HhHHHHHHHHHHHcCCCccc--------------------CcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHH---
Confidence 66777777777766542110 1144556677788899999999889999999987643
Q ss_pred ccchhhhhHHHHHHHHHHHHHHhhhhhhccc-------cccchhHhHHHHHHHHHHHHHHHhccceE-EeeCCCCCcchh
Q 008158 170 VKGINSFFNWYYTTFTVVILITQTVLVYIQD-------SVSWVIGFGIPTVLMIGAIILFLVGKKLY-VLVEPEGSIFSG 241 (575)
Q Consensus 170 ~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~-------~~gw~~~f~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~ 241 (575)
+|.+..++-..+.++|..+...+.+.+.. ..||+..-.+-+++..+.++.+++..+++ .++.+.++...
T Consensus 146 --ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~- 222 (467)
T COG2211 146 --ERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGVK- 222 (467)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCccccc-
Confidence 39999999999999997776655544432 34676665555555554554444433221 11111110000
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCccccCCCCcccccccCCCcchhhhhhhhhhhccCCCCCCCCCCCCccccchhhHHH
Q 008158 242 IGQVLVAAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVE 321 (575)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (575)
..+.+.-.. ...
T Consensus 223 ---------------------------------------------~~~~~~~~~-----------------------~~~ 234 (467)
T COG2211 223 ---------------------------------------------LKLKDSFLL-----------------------IFK 234 (467)
T ss_pred ---------------------------------------------ccHHHHHHH-----------------------HHc
Confidence 000000000 000
Q ss_pred hHhhhhhhHHHHHHHHHHHHhhccccceeeeeccc-ccccCCCccccCccccccchhHhhHhhhhcccchhHHHhhhhhc
Q 008158 322 EVKCLIKIIPIWAAGIISLTSISQQGTFTVSQAMK-MNRHLGPKFQIPPGTVGVISMITIGLWLPFYDTVLVPALRKITK 400 (575)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~~~~~~r~~~ 400 (575)
+ |.+...+... .+.+.......+...++..+ ++..- ..+...........++..++ ..++.+|++|
T Consensus 235 N-rp~~~~l~~~---l~~~~~~~i~~s~~~yy~~y~lg~~~-----l~~~~~~~~~~~~~l~~~~~----~p~L~~~~gk 301 (467)
T COG2211 235 N-RPLLLLLLMN---LLLFIAFNIRGSIMVYYVTYVLGDPE-----LFAYLLLLASGAGLLIGLIL----WPRLVKKFGK 301 (467)
T ss_pred c-chHHHHHHHH---HHHHHHHHHHhhhhheeEEEEcCChH-----HHHHHHHHHHHHHHHHHHHh----HHHHHHHhch
Confidence 1 1111111111 22222222222222111111 11100 11111111222222222232 2333556544
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccC-----
Q 008158 401 HEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQF----- 475 (575)
Q Consensus 401 r~~~~~~~~~i~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~----- 475 (575)
| +...+|.++..++.+...+.. ..+.+..++..++.++|.+...+..++.+.|..
T Consensus 302 k-------~~~~~~~~~~~i~~~~~~f~~-------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~ 361 (467)
T COG2211 302 K-------KLFLIGLLLLAVGYLLLYFTP-------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEW 361 (467)
T ss_pred H-------HHHHHHHHHHHHHHHHHHhhc-------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHH
Confidence 4 567788777777777766552 235556666668888999999999998887776
Q ss_pred --CchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 008158 476 --PDHMKSIANSLLFCSFGFASYLSSLLITIVHGVT 509 (575)
Q Consensus 476 --p~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~ 509 (575)
..+..|...|.+.+..=+|..++..+.++++...
T Consensus 362 ~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~ 397 (467)
T COG2211 362 KTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAI 397 (467)
T ss_pred HhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3456788889888999999999999999999875
No 114
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.41 E-value=6.3e-12 Score=133.09 Aligned_cols=175 Identities=14% Similarity=0.132 Sum_probs=130.8
Q ss_pred chhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHH
Q 008158 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (575)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~ 96 (575)
+..+..+...+.....++....+++.|+++++|+++.+.+.+.+...++..++.+++|+++||+ |||+.+..+.....+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~-g~~~~~~~~~~~~~~ 294 (393)
T PRK15011 216 RDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRL-GKRFLMRVAAVAGVC 294 (393)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHH
Confidence 3334444444444445455566889999999999999999988887788888899999999995 999988776665554
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhh
Q 008158 97 GMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSF 176 (575)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 176 (575)
........+ +...+++.+++.+++.|...+..+.+..|.+|+ + |+++
T Consensus 295 ~~~~~~~~~--------------------------~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~------~g~~ 341 (393)
T PRK15011 295 FYAGMLMAH--------------------------SPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG-Q------AGSA 341 (393)
T ss_pred HHHHHHHHh--------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-C------cchH
Confidence 433333322 344566677777777666666666777888873 3 7899
Q ss_pred hHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhc
Q 008158 177 FNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVG 225 (575)
Q Consensus 177 ~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~ 225 (575)
.++++...++|..++|.++|++.+..||+..|++..++.++++++.+..
T Consensus 342 ~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 342 TTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 9999988999999999999999998899999998777777766665543
No 115
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.39 E-value=6.2e-13 Score=127.75 Aligned_cols=377 Identities=12% Similarity=0.145 Sum_probs=214.2
Q ss_pred hhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 008158 35 GLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPK 114 (575)
Q Consensus 35 ~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 114 (575)
.-..-+..+.+.+.+++.++..++-++|..-..+.+.++|++.||.+|-|..-.+-+....+|.++.+....
T Consensus 61 d~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi-------- 132 (459)
T KOG4686|consen 61 DAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGI-------- 132 (459)
T ss_pred CCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchH--------
Confidence 344566778888888888899999999999999999999999999999776444444444566666654221
Q ss_pred CCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhh
Q 008158 115 CDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTV 194 (575)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v 194 (575)
....+.+..+|++.|+|.-....+-+.+...+|+.+| .+..+++......+|+..--.+
T Consensus 133 ---------------~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKE------Ln~vfGlqlSvAR~GstvNf~l 191 (459)
T KOG4686|consen 133 ---------------SHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKE------LNFVFGLQLSVARLGSTVNFLL 191 (459)
T ss_pred ---------------HHHHHHHHhhheeeccCchhhhhhhcceeEEEecCcc------ccchhhHHHHHHHhhceeeeee
Confidence 1278889999999999988888888999999999988 9999999998888888766666
Q ss_pred hhhccccccchhHhHHHHHHHHHHHHHHHhccceEEeeCCCCCcchhHHHHHHHHHHhhcccCCCCCCCCCccccCCCCc
Q 008158 195 LVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQVLVAAYKKRRLTLPQGQMDHHGIFYDPPPK 274 (575)
Q Consensus 195 ~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (575)
-+++.+..+ .++-+..-..+++.+.+-.+. ....+..+......+ + +.++.+..+..+
T Consensus 192 m~~ly~~~~---~~~~~~ghT~LG~~l~~~~~t--------------c~~slical~lg~~D--~---rAerilh~e~g~ 249 (459)
T KOG4686|consen 192 MPFLYDTMG---RMFPGVGHTLLGLWLCFEVKT--------------CKQSLICALSLGLSD--D---RAERILHLEEGF 249 (459)
T ss_pred cHHHHHHHH---HhcccchHHHHHHHHHHHHHH--------------HHHHHHHHHHhhhhh--h---HHHHHHhhhcCc
Confidence 666655432 111011112222222111000 000000110000000 0 000000000000
Q ss_pred ccccccCCCcchhhhhhhhhhhccCCCCCCCCCCCCccccchhhHHHhHhhhhhhHHHHHH---HHHHHHhhccccceee
Q 008158 275 LFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKCLIKIIPIWAA---GIISLTSISQQGTFTV 351 (575)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~t~~~ 351 (575)
.|.. .+.++++.. ..++|.. ...++.....+.+
T Consensus 250 ------------------------------~Ge~---------pkLtdv~~f--~ppfw~~~iicv~yyva~fPFi~--- 285 (459)
T KOG4686|consen 250 ------------------------------LGEE---------PKLTDVNTF--YPPFWVLVIICVLYYVAWFPFIT--- 285 (459)
T ss_pred ------------------------------ccCC---------ccccccccc--CccHHHHHHHHHHHHHHHHHHhh---
Confidence 0000 000111111 1111211 1222222111111
Q ss_pred eecccccccCCCccccCccccccchhHh---hHhhhhcccchhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHh
Q 008158 352 SQAMKMNRHLGPKFQIPPGTVGVISMIT---IGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLV 428 (575)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~i~~~~~~~~~~~~~~r~~~r~~~~~~~~~i~ig~~~~~~~~~~~~~~ 428 (575)
.-.......+| .++...++++... ..+..|+.+.+ .||.+++ .+.+..+.++...+-..+.+
T Consensus 286 lg~~fF~~rfG----lS~~~a~~i~s~vy~Isav~spvfg~i----~Dk~G~n------~~wv~~a~~~tl~~H~~l~F- 350 (459)
T KOG4686|consen 286 LGPMFFQKRFG----LSAVSAGNILSTVYGISAVLSPVFGAI----SDKYGFN------LWWVASACILTLLGHSGLFF- 350 (459)
T ss_pred hhHHHHHHhhC----CChhhccchhhhhhhhhhhhhhhHHHh----Hhhhcce------ehhHHHHHHHHHHHhhhHHh-
Confidence 11111223332 3333333333322 33444443333 7776544 24444444444444333322
Q ss_pred HhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 008158 429 ERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHGV 508 (575)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~ 508 (575)
+.+....+++++|++..+.....+..+...+|.+.-|++.|..++..++|-.+.+.+.+.+.|.
T Consensus 351 ----------------t~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~ 414 (459)
T KOG4686|consen 351 ----------------TFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADG 414 (459)
T ss_pred ----------------hhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecC
Confidence 2222345778899999999999999999999999999999999999999999999999988763
Q ss_pred cccCCCCCcccCCCCcchhHHHHHHHHHHHHHHHHHHHHHH
Q 008158 509 TARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCA 549 (575)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~v~~i~~~~~~ 549 (575)
- +++ ..++..|...+.+++....+.+...
T Consensus 415 ~-----g~y-------~~le~ffl~~~~~aL~svgil~~~N 443 (459)
T KOG4686|consen 415 D-----GSY-------DNLEAFFLIIGLMALTSVGILFYLN 443 (459)
T ss_pred C-----Cch-------hhHHHHHHHHHHHHHHHHHHHhhee
Confidence 1 111 1345566666777777655555543
No 116
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.37 E-value=6.4e-12 Score=136.20 Aligned_cols=175 Identities=16% Similarity=0.064 Sum_probs=129.5
Q ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHH
Q 008158 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGM 98 (575)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~ 98 (575)
++......++....+++...++|.|+++++|+|..++++......++..++.+++|+++||+ |||+.+.....+..++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-g~r~~~~~~~~~~~~~~ 338 (467)
T PRK09556 260 IWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLA-NGRRALVACIALALIIF 338 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCchHHHHHHHHHHHH
Confidence 44455556666666677888999999999999999999999999999999999999999995 99987766555444433
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhH
Q 008158 99 LTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFN 178 (575)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 178 (575)
....+... .+.....+.+++.|++..+..........|.+|+++ |+++.+
T Consensus 339 ~~~~~~~~------------------------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~------~g~a~g 388 (467)
T PRK09556 339 TLGVYQHA------------------------TSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKA------IGVANG 388 (467)
T ss_pred HHHHHHhc------------------------CcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhh------HHHHHH
Confidence 22222210 033445566677776543333333356679999877 999999
Q ss_pred HHHHHHHH-HHHHHhhhhhhccc------------cccchhHhHHHHHHHHHHHHHHHh
Q 008158 179 WYYTTFTV-VILITQTVLVYIQD------------SVSWVIGFGIPTVLMIGAIILFLV 224 (575)
Q Consensus 179 ~~~~~~~i-g~~~~~~v~~~l~~------------~~gw~~~f~~~~~~~~i~~~~~~~ 224 (575)
+.+...++ |..++|.+.|++.+ ..+|+..|++.+++.+++.+..++
T Consensus 389 i~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 389 IKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAI 447 (467)
T ss_pred HHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHH
Confidence 99999886 77999999999988 578999998877777766655543
No 117
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.37 E-value=1.7e-11 Score=133.81 Aligned_cols=176 Identities=15% Similarity=0.111 Sum_probs=128.0
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHH
Q 008158 20 PYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGML 99 (575)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~ 99 (575)
...+...++....+|++..++|.|+++.+|++..+.+++.....++..++.+++|+++||+ |||+++..+.++..++..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~~~~~~~~~ 331 (490)
T PRK10642 253 LTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRF-GRRPFVILGSVALFVLAI 331 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHH
Confidence 3333444556677888999999999999999988888888888899999999999999995 999998887765544433
Q ss_pred HHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHH
Q 008158 100 TVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNW 179 (575)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 179 (575)
.+..... ..+...+++++++.|++.++..+....+..|.+|++. |++++++
T Consensus 332 ~~~~~~~-----------------------~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~------Rg~~~g~ 382 (490)
T PRK10642 332 PAFILIN-----------------------SNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHI------RYSALAA 382 (490)
T ss_pred HHHHHHh-----------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcc------chHHHHH
Confidence 3222110 0134556778888888776666677788889999887 9999998
Q ss_pred HHHHHHHHHHHHhhhhhhccccc-cchhHhHHHHHHHHHHHHHHHhc
Q 008158 180 YYTTFTVVILITQTVLVYIQDSV-SWVIGFGIPTVLMIGAIILFLVG 225 (575)
Q Consensus 180 ~~~~~~ig~~~~~~v~~~l~~~~-gw~~~f~~~~~~~~i~~~~~~~~ 225 (575)
.+....+++.++|.+.+++.+.. +|+..+++..+..+++++..++.
T Consensus 383 ~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 429 (490)
T PRK10642 383 AFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTM 429 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHh
Confidence 66666677788999999887654 46766665555555555444443
No 118
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.36 E-value=1.8e-11 Score=126.01 Aligned_cols=172 Identities=21% Similarity=0.257 Sum_probs=148.8
Q ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchH-HHHHHHHHHHHH
Q 008158 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFK-TITFASIAAILG 97 (575)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~-~~~~~~~l~~~~ 97 (575)
.+......++..........+++.++.+.+|.++.+.+.+.....++..++.++.|++.||+ |||+ .+..+..+..++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~ 255 (352)
T cd06174 177 LLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL-GRRRLLLLIGLLLAALG 255 (352)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHH
Confidence 34444455666666667777888888888899999999999999999999999999999995 9999 999999999888
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhh
Q 008158 98 MLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFF 177 (575)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 177 (575)
.+.....+ +...+.+..++.|++.+...+....+..|..|+++ |++.+
T Consensus 256 ~~~~~~~~--------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 303 (352)
T cd06174 256 LLLLALAP--------------------------SLALLLVALLLLGFGLGFAFPALLTLASELAPPEA------RGTAS 303 (352)
T ss_pred HHHHHHhc--------------------------cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHH------HHHHH
Confidence 88887754 45667888999999999999999999999999877 99999
Q ss_pred HHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHH
Q 008158 178 NWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFL 223 (575)
Q Consensus 178 ~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~ 223 (575)
+.++...++|..+++.+.+++.+..+|+..|++.+++.+++.+..+
T Consensus 304 ~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 304 GLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhe
Confidence 9999999999999999999999889999999988887776666543
No 119
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.34 E-value=2.3e-09 Score=110.07 Aligned_cols=375 Identities=12% Similarity=0.081 Sum_probs=209.7
Q ss_pred hhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhccc-----chHHH-HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 008158 45 LKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIG-----RFKTI-TFASIAAILGMLTVTLTAWLPQLHPPKCDVA 118 (575)
Q Consensus 45 ~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~G-----rr~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (575)
-.|++++..-.+.+++...+...+ .+..|+.+|++ + ||..+ ..|..++..+..+.+++..+=. . ..
T Consensus 7 IvEL~vpA~lv~~lval~~~~ap~-R~~~G~~SD~~-~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~--~-~~--- 78 (403)
T PF03209_consen 7 IVELGVPAWLVALLVALHYLVAPL-RVWFGHRSDTH-PSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLA--E-SG--- 78 (403)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHH-HHHhccccccC-cccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHc--c-cc---
Confidence 457899888899999888887764 67779999996 7 77544 4455556666666665432110 0 00
Q ss_pred CCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhhhc
Q 008158 119 KPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYI 198 (575)
Q Consensus 119 ~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l 198 (575)
.+...+.........+.-.+.|+|.+.......++.+|..|+++ |++..++.+.+.-+|.+++..+.+.+
T Consensus 79 ----~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~------R~~~v~ivw~Mli~G~iv~ai~~g~l 148 (403)
T PF03209_consen 79 ----QQSSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEER------RPRVVAIVWVMLIVGIIVSAIVFGRL 148 (403)
T ss_pred ----cccccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhh------hhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000111123334555567799999999999999999999988 99999999999999999999999988
Q ss_pred cccccchh---Hh-HHHHHHHHHHHHHHHhccceEEeeCCCCCcchhHHHHHHHHHHhhcccCCCCCCCCCccccCCCCc
Q 008158 199 QDSVSWVI---GF-GIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQVLVAAYKKRRLTLPQGQMDHHGIFYDPPPK 274 (575)
Q Consensus 199 ~~~~gw~~---~f-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (575)
.+.++-.- ++ ....+...+.++..+=.+++.++..+.++ ++
T Consensus 149 L~~~s~~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~~~~~--------------------------~~--------- 193 (403)
T PF03209_consen 149 LDPFSPERLIQVIQGVALIALLLNLIALWGQEPRRSRRAAAAE--------------------------RP--------- 193 (403)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccccCCC--------------------------CC---------
Confidence 77665221 11 22222233333333322222211110000 00
Q ss_pred ccccccCCCcchhhhhhhhhhhccCCCCCCCCCCCCccccchhhHHHhHhhhhhhHHHHHHHHHHHHhhccccceeeeec
Q 008158 275 LFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKCLIKIIPIWAAGIISLTSISQQGTFTVSQA 354 (575)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ 354 (575)
+.++.+. |+.... ..+.+++... +++....++. |=. +..+
T Consensus 194 -----------~~~f~~a-------------------~~~~~~--~~~a~~f~~f--l~l~t~a~~~---QD~---iLEP 233 (403)
T PF03209_consen 194 -----------RPPFREA-------------------WRQVWA--SPQARRFFVF--LFLGTLAFFM---QDV---ILEP 233 (403)
T ss_pred -----------CccHHHH-------------------HHHHHh--CCChhHHHHH--HHHHHHHHHh---hHH---HcCC
Confidence 0000000 000000 0011111111 1111111111 100 0000
Q ss_pred ccccccCCCccccCcccc---ccchhHhhHhhhhcccchhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHhHhh
Q 008158 355 MKMNRHLGPKFQIPPGTV---GVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERG 431 (575)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~---~~i~~~~~~i~~~~~~~~~~~~~~r~~~r~~~~~~~~~i~ig~~~~~~~~~~~~~~~~~ 431 (575)
+-...+ .++.+.. +.+...+.++...+..+. .. |+ .++.+...+|.....+++........
T Consensus 234 -ygg~Vf----gmsv~eTT~Lta~~~~G~L~G~~~~g~~----l~----~~--~~~~~~a~~G~~~~~~~f~lii~a~~- 297 (403)
T PF03209_consen 234 -YGGEVF----GMSVGETTRLTAFWGGGTLLGMLLAGFL----LS----RR--LGKKRTAALGCLLGALAFALIILAGP- 297 (403)
T ss_pred -chhHHc----CCCHHHHHHHHHHHHHHHHHHHHHHHHH----hc----CC--CCchHHHHHHHHHHHHHHHHHHHHHh-
Confidence 111112 1333332 333444444443332222 22 11 23334455666666666655544421
Q ss_pred hhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc
Q 008158 432 RRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHGVTAR 511 (575)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~ 511 (575)
..+.+.+-+..+++|++.+.......+..++..+++..|+.+|.+...+.++..++..+.+.+.|....
T Consensus 298 -----------~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~ 366 (403)
T PF03209_consen 298 -----------LGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRA 366 (403)
T ss_pred -----------cccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 235667788889999999999999999999999999999999999999999999999999998887421
Q ss_pred CCCCCcccCCCCcchhHHHHHHHHHHHHHHHHHH
Q 008158 512 HGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYF 545 (575)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~f~~~a~i~~v~~i~~ 545 (575)
+..++ ...+|..+|.+=+++.++++.+.
T Consensus 367 -----~~~~~-~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 367 -----LFGNS-PALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred -----hccCC-cchHHHHHHHHHHHHHHHHHHHH
Confidence 11100 11255666665555555554433
No 120
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.34 E-value=1.8e-09 Score=116.46 Aligned_cols=88 Identities=15% Similarity=0.189 Sum_probs=70.3
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCCCCc
Q 008158 445 SVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDA 524 (575)
Q Consensus 445 ~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~~~~~~~ 524 (575)
+.+.+.+..++.|+..+...+.+-++..+..|++..+...|++.+.+..++++||.+.+.+.+.++
T Consensus 379 ~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg-------------- 444 (477)
T PF11700_consen 379 SPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATG-------------- 444 (477)
T ss_pred cHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------------
Confidence 444555556788999999999999999999999999999999999999999999999999998762
Q ss_pred chhHHHHHHHHHHHHHHHHHHHH
Q 008158 525 GRLDYFYFLIAGLGGLNIVYFLY 547 (575)
Q Consensus 525 ~~~~~~f~~~a~i~~v~~i~~~~ 547 (575)
...+.+....++.++++++.+.
T Consensus 445 -~~r~g~~~l~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 445 -SQRYGFLFLLVLFLIGLILLFF 466 (477)
T ss_pred -CchhHHHHHHHHHHHHHHHHhh
Confidence 1234556666666666555543
No 121
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.34 E-value=2.1e-11 Score=127.66 Aligned_cols=167 Identities=17% Similarity=0.148 Sum_probs=129.7
Q ss_pred HHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHH
Q 008158 24 GNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTL 103 (575)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~ 103 (575)
...++...........++.|+.+++|.++.+.+++.....+...++.+++|++.||+ |||+++..+.++..+.......
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~ 284 (375)
T TIGR00899 206 VACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF-GKRRLMLLAALAGVAFYTGLAA 284 (375)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-cchhHHHHHHHHHHHHHHHHHH
Confidence 333443333444556788899999999999999988887777788889999999995 9999988877665555444443
Q ss_pred HhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHH
Q 008158 104 TAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTT 183 (575)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 183 (575)
.+ +.+.+++.+++.|++.+...+....+..|..|+ + ++++.++++..
T Consensus 285 ~~--------------------------~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~ 331 (375)
T TIGR00899 285 DN--------------------------SLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG-R------AGAATTLYTNT 331 (375)
T ss_pred HH--------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-h------hhHHHHHHHHH
Confidence 32 445566777888888888778778888888764 3 56999999999
Q ss_pred HHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHh
Q 008158 184 FTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLV 224 (575)
Q Consensus 184 ~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 224 (575)
.++|..++|.++|++.+..||+..|++.+++.+++.++.+.
T Consensus 332 ~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 332 GRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhe
Confidence 99999999999999999889999999888777776666543
No 122
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.34 E-value=1.4e-11 Score=128.41 Aligned_cols=163 Identities=12% Similarity=0.123 Sum_probs=128.8
Q ss_pred HHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHH
Q 008158 25 NETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLT 104 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~ 104 (575)
..++............+.|. +++|.++.+.+.+.+.+.++..++.++.|+++||+ |||+.+..+..+..++.+...+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~ 290 (377)
T TIGR00890 213 SFFLNAVSGLLLIGLYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKI-GRQKTMSIVFGISAVGMAAMLFI 290 (377)
T ss_pred HHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhHHHHHHHHHHHHHHHc
Confidence 33333333333445555664 57899999999999999999999999999999995 99999999888888887776654
Q ss_pred hhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHH
Q 008158 105 AWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTF 184 (575)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 184 (575)
+. . +...++...++.|++.+...+..+.+..|.+|+++ |++.+++++...
T Consensus 291 ~~-----------------------~-~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~ 340 (377)
T TIGR00890 291 PM-----------------------L-NDVLFLATVALVFFTWGGTISLFPSLVSDIFGPAN------SAANYGFLYTAK 340 (377)
T ss_pred cc-----------------------c-hhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhh------hhhHhHHHHHHH
Confidence 31 0 12234455677888888888888889999999877 999999999999
Q ss_pred HHHHHHHhhhhhhccccccchhHhHHHHHHHHHHH
Q 008158 185 TVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAI 219 (575)
Q Consensus 185 ~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~ 219 (575)
++|..++|.+.|++.+..||++.|.+.+++.++++
T Consensus 341 ~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 341 AVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 99999999999999998999999988776655443
No 123
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.33 E-value=2.3e-11 Score=128.88 Aligned_cols=164 Identities=15% Similarity=0.113 Sum_probs=130.8
Q ss_pred HHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcC
Q 008158 29 ERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLP 108 (575)
Q Consensus 29 ~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~ 108 (575)
..++++.+..+++.|+.+ .|+ .+.+.....+.++..++.++.|++.||+ |||+.+..+..+..++.+.....+
T Consensus 228 ~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~--- 300 (399)
T PRK05122 228 ASIGFGTIATFITLYYAA-RGW--DGAALALTLFGVAFVGARLLFGNLINRL-GGLRVAIVSLLVEILGLLLLWLAP--- 300 (399)
T ss_pred HHHHHHHHHHHHHHHHHH-ccc--ccchHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhc---
Confidence 344555566778888764 465 3456667788888889999999999995 999999888888888777666543
Q ss_pred CCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHH
Q 008158 109 QLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVI 188 (575)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~ 188 (575)
+.+.+++.+++.|++.+...+.......|.+|+++ |++.+++++...++|.
T Consensus 301 -----------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~g~ 351 (399)
T PRK05122 301 -----------------------SPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQN------RGAALGAYSVFLDLSL 351 (399)
T ss_pred -----------------------cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHHHHHHH
Confidence 44556778889999999888887778888888766 9999999999999999
Q ss_pred HHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhccce
Q 008158 189 LITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKL 228 (575)
Q Consensus 189 ~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~ 228 (575)
.+++.+.|++.+..||+..|++.+++.+++++..+..+++
T Consensus 352 ~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 352 GITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999998999999998887777776665554443
No 124
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.33 E-value=1.6e-11 Score=125.43 Aligned_cols=179 Identities=15% Similarity=0.075 Sum_probs=143.8
Q ss_pred chhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcc-cchHH-HHHHHHHH
Q 008158 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYI-GRFKT-ITFASIAA 94 (575)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~-Grr~~-~~~~~~l~ 94 (575)
|.++++...+.+--+.-|++.-+.|+|+.|..|+|..++++..+.|-.+...+++++||++||++ |||.. -++++++.
T Consensus 252 k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i 331 (448)
T COG2271 252 KLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLI 331 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 55677778888888888999999999999999999999999999999999999999999999998 77754 34444444
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchh
Q 008158 95 ILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGIN 174 (575)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 174 (575)
.++.+....+. ..+..+..+..++.|+-.-+.+-.+.....|..|++. -|
T Consensus 332 ~~~~~~~w~~~------------------------~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~A------aG 381 (448)
T COG2271 332 TASLVLYWLAP------------------------NGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKA------AG 381 (448)
T ss_pred HHHHHHHHcCC------------------------CccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhh------cc
Confidence 44444444432 1145666777778888877777777777889999877 79
Q ss_pred hhhHHHHHHHHH-HHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhc
Q 008158 175 SFFNWYYTTFTV-VILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVG 225 (575)
Q Consensus 175 ~~~~~~~~~~~i-g~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~ 225 (575)
.+.+....+..+ |..++....|++.|.+||...|++..+..+++.++++..
T Consensus 382 tA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~ 433 (448)
T COG2271 382 TATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPV 433 (448)
T ss_pred chhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHH
Confidence 999999999988 999999999999998999999988776666666555443
No 125
>PRK03699 putative transporter; Provisional
Probab=99.32 E-value=3.1e-11 Score=127.83 Aligned_cols=170 Identities=15% Similarity=0.110 Sum_probs=131.3
Q ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHH
Q 008158 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGM 98 (575)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~ 98 (575)
.+.+....++.....+++..++|.|+++.+|+|..+.+.+.+.+.++..++.+++|+++||+ |||+++.....+..++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~l~~~~~~~~~~~ 285 (394)
T PRK03699 207 VLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFF-DLQRILTVLAGLALVLM 285 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHh-chhhHHHHHHHHHHHHH
Confidence 33333444555566677889999999999999999999999999999999999999999995 99999887777666655
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhH
Q 008158 99 LTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFN 178 (575)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 178 (575)
.+..... +...+.+..++.|++.+...+...++..|..|++ ++...+
T Consensus 286 ~~~~~~~--------------------------~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~g 332 (394)
T PRK03699 286 YLFVNTD--------------------------DPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA-------SPKLVN 332 (394)
T ss_pred HHHHHcC--------------------------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-------CHHHHH
Confidence 5544332 3334555667788887777787777777766532 456678
Q ss_pred HHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHH
Q 008158 179 WYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILF 222 (575)
Q Consensus 179 ~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~ 222 (575)
+...+.++|..++|.+.|++.+..||+..|++.+++.++++++.
T Consensus 333 ~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~ 376 (394)
T PRK03699 333 FILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMC 376 (394)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHH
Confidence 88888899999999999999998999999987776666655443
No 126
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.30 E-value=6.8e-12 Score=111.12 Aligned_cols=133 Identities=14% Similarity=0.178 Sum_probs=113.2
Q ss_pred HHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHH
Q 008158 59 LNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVM 138 (575)
Q Consensus 59 ~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 138 (575)
...+.++..++.++.|+++||+ |||+.+..+..+..++.+...... +.+.+.+
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~ 56 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRF-GRKPVLLVGLFIFVLSTAMFALSS--------------------------NITVLII 56 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhc-chhHHHHHHHHHHHHHHHHHHHhc--------------------------cHHHHHH
Confidence 3455677888999999999995 999999999888888887776653 5667888
Q ss_pred HHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHH
Q 008158 139 GLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGA 218 (575)
Q Consensus 139 ~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~ 218 (575)
.+++.|++.+...+....+..|.+|+++ |++..++.+...++|..++|.+.+++.+..+|++.|++.+...++.
T Consensus 57 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (141)
T TIGR00880 57 ARFLQGFGAAFALVAGAALIADIYPPEE------RGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAA 130 (141)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHCChhh------hhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHH
Confidence 8999999999999999999999999877 9999999999999999999999999998889999998877666655
Q ss_pred HHHHHh
Q 008158 219 IILFLV 224 (575)
Q Consensus 219 ~~~~~~ 224 (575)
.+..+.
T Consensus 131 ~~~~~~ 136 (141)
T TIGR00880 131 FILLAF 136 (141)
T ss_pred HHHHhh
Confidence 555443
No 127
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.30 E-value=3.1e-11 Score=127.29 Aligned_cols=159 Identities=16% Similarity=0.163 Sum_probs=131.2
Q ss_pred cccCCCcchhHHHHHHHHHHHHHhhhhHHHHHHHHhh-hhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccc-hHHH
Q 008158 10 QKKPGGWKAMPYILGNETFERLATIGLLANFMVYLLK-EYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGR-FKTI 87 (575)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr-r~~~ 87 (575)
+..+.+||.+++.....++..+.++.+.+..-+|+++ +.+-+.+..|+++++..++..+..+..|+-..|. |+ |+.+
T Consensus 27 ~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~-~~~k~Pl 105 (488)
T KOG2325|consen 27 DERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKT-GSVKKPL 105 (488)
T ss_pred cccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhccccccc-CCcccCH
Confidence 3467899999999999999999988888888899886 5788899999999999999999999999999995 75 7788
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCc
Q 008158 88 TFASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTD 167 (575)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~ 167 (575)
+++.++.++|.++.......|+ ...++++++|++.|+|.+... ..-+|++|-...++
T Consensus 106 i~s~ii~~~g~llY~~l~~~~~---------------------~~~y~mL~~R~l~Gvg~~n~a-~lR~Y~a~~s~~~d- 162 (488)
T KOG2325|consen 106 IVSFLIAIIGNLLYLALAYVPN---------------------GVKYLMLVARILTGVGVGNFA-VLRAYIADASTVED- 162 (488)
T ss_pred HHHHHHHHHHHHHHHHHHhccc---------------------chHHHHHHHHHHcCcCcccHH-HHHHHHHhccCccc-
Confidence 8899999999998843332331 267889999999999987754 45888888666555
Q ss_pred ccccchhhhhHHHHHHHHHHHHHHhhhhhh
Q 008158 168 EGVKGINSFFNWYYTTFTVVILITQTVLVY 197 (575)
Q Consensus 168 ~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~ 197 (575)
|.++++....+..+|..+||.+...
T Consensus 163 -----R~rA~a~~~~~~vlg~ilGp~~q~~ 187 (488)
T KOG2325|consen 163 -----RPRAFAATSGGFVLGIILGPTIQLA 187 (488)
T ss_pred -----hHHHHHHhhhHHHHHHHHhHHHHHH
Confidence 9999999888888888888876543
No 128
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.29 E-value=3.7e-11 Score=135.31 Aligned_cols=133 Identities=8% Similarity=0.050 Sum_probs=107.8
Q ss_pred HHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHH
Q 008158 58 ILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLV 137 (575)
Q Consensus 58 i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 137 (575)
...+..++..++.+++|+++|| +|||++++.+.++.+++.++.+++. +...++
T Consensus 600 ~~~l~~l~~i~G~il~g~L~Dr-~GRr~~l~~~~~lsai~~ll~~~~~--------------------------s~~~ll 652 (742)
T TIGR01299 600 VNFLGTLAVLPGNIVSALLMDK-IGRLRMLAGSMVLSCISCFFLSFGN--------------------------SESAMI 652 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHHHHHc--------------------------cHHHHH
Confidence 3556667888999999999999 5999999999999998888877754 334466
Q ss_pred HHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHH
Q 008158 138 MGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIG 217 (575)
Q Consensus 138 ~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i 217 (575)
+.+++.+++.++..+...++++|++|.+. |++++++.+....+|+++||.+++++.+. +...+|++.+++.++
T Consensus 653 ~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~------Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll 725 (742)
T TIGR01299 653 ALLCLFGGLSIAAWNALDVLTVELYPSDK------RATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALAC 725 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHH
Confidence 67778888777788889999999999877 99999999999999999999999988663 456677777666666
Q ss_pred HHHHHHh
Q 008158 218 AIILFLV 224 (575)
Q Consensus 218 ~~~~~~~ 224 (575)
+.++.++
T Consensus 726 ~~ll~~~ 732 (742)
T TIGR01299 726 GGLLALK 732 (742)
T ss_pred HHHHHHh
Confidence 5555444
No 129
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.28 E-value=2.6e-10 Score=117.34 Aligned_cols=163 Identities=13% Similarity=0.056 Sum_probs=119.1
Q ss_pred HHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 008158 38 ANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDV 117 (575)
Q Consensus 38 ~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 117 (575)
..+..|..+.++ +...+-|...+|.+......+++-|+.||+ |=|.+.+++..+-.+|..+=.++.. |.+.+
T Consensus 65 a~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~-GLR~a~llgt~ln~iGa~Ir~iss~-p~v~~----- 136 (480)
T KOG2563|consen 65 APINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKF-GLRTALLLGTVLNGIGAWIRLISSL-PFVPP----- 136 (480)
T ss_pred hhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhccc-chHHHHHHHHHHHHHHHHHhhhccC-ccccc-----
Confidence 445567777777 777888999999999999999999999995 9999999999999999998777652 32211
Q ss_pred CCCCCCccCCCcchhh--HHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhh
Q 008158 118 AKPPFGQCKSANSMQL--GVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVL 195 (575)
Q Consensus 118 ~~~~~~~~~~~~~~~~--~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~ 195 (575)
.. .+.+.+-.+.+.+.-.+.....-..+-+|++++ |..+...-.++..+|..+|..+.
T Consensus 137 --------------~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~q------ra~A~~~~v~~n~LGvavg~llp 196 (480)
T KOG2563|consen 137 --------------LFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQ------RAIATVLGVMGNPLGVAVGFLLP 196 (480)
T ss_pred --------------cchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcch------hhhhhhHHHhcchHHHHHHhhcc
Confidence 22 366788888888887777776677777899988 99999888888888888887776
Q ss_pred hhccc------cccchh--HhHHHHHHHHHHHHHHHhccce
Q 008158 196 VYIQD------SVSWVI--GFGIPTVLMIGAIILFLVGKKL 228 (575)
Q Consensus 196 ~~l~~------~~gw~~--~f~~~~~~~~i~~~~~~~~~~~ 228 (575)
..+.. ..+|.. .|+....+..+.+++..+.+++
T Consensus 197 pilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~ 237 (480)
T KOG2563|consen 197 PILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTK 237 (480)
T ss_pred ceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 66543 234654 3443333444444444444444
No 130
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.28 E-value=4.3e-11 Score=127.83 Aligned_cols=176 Identities=10% Similarity=-0.034 Sum_probs=133.0
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHhhhhCCC--------hhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHH
Q 008158 21 YILGNETFERLATIGLLANFMVYLLKEYHMN--------QTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASI 92 (575)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~--------~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~ 92 (575)
..++..++..........+++.|+.+ .|.+ ..+.+.+.++..+...++.++.|+++||+ |||+++..+.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~-g~r~~l~~~~~ 289 (418)
T TIGR00889 212 IFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRF-GIKKVMLLSLV 289 (418)
T ss_pred eHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHH
Confidence 33344444444434455666777764 4433 36678889999999999999999999995 99999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccc
Q 008158 93 AAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKG 172 (575)
Q Consensus 93 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 172 (575)
+..++..+...... +..+...+++.+++.|++.+...+....++.|.+|+++
T Consensus 290 ~~~v~~~l~~~~~~----------------------~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~------ 341 (418)
T TIGR00889 290 AWALRFGFFAYGDP----------------------EYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHI------ 341 (418)
T ss_pred HHHHHHHHHHHcCc----------------------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------
Confidence 88888766665321 01134556778899999999888888999999999877
Q ss_pred hhhhhHHHH-HHHHHHHHHHhhhhhhcccc------ccchhHhHHHHHHHHHHHHHHHhcc
Q 008158 173 INSFFNWYY-TTFTVVILITQTVLVYIQDS------VSWVIGFGIPTVLMIGAIILFLVGK 226 (575)
Q Consensus 173 r~~~~~~~~-~~~~ig~~~~~~v~~~l~~~------~gw~~~f~~~~~~~~i~~~~~~~~~ 226 (575)
|++.+++.+ ....+|..+||.++|++.+. +||+..|.+.+++.+++.+++++..
T Consensus 342 ~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~ 402 (418)
T TIGR00889 342 RASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFF 402 (418)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999997 56789999999999999876 4699999887776666655554433
No 131
>PRK03545 putative arabinose transporter; Provisional
Probab=99.27 E-value=1.6e-10 Score=122.11 Aligned_cols=170 Identities=9% Similarity=-0.046 Sum_probs=129.5
Q ss_pred HHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHH
Q 008158 24 GNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTL 103 (575)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~ 103 (575)
...++.....++...++++|+.+.+|+|..+.+++...+.++..++.++.|+++||+ |||+.. .+..+..++......
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~-~~~~~~~~~~~~l~~ 289 (390)
T PRK03545 212 LLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRH-PSGFLL-IAIALLLVCLLLLLP 289 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHH-HHHHHHHHHHHHHHH
Confidence 334444455556667888899888999999999999999999999999999999995 988654 444444444333322
Q ss_pred HhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHH
Q 008158 104 TAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTT 183 (575)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 183 (575)
..+ +...+++..++.|++.+...+...+.+.+..| ++ |++++++++..
T Consensus 290 ~~~-------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~------~~~~~g~~~~~ 337 (390)
T PRK03545 290 AAN-------------------------SEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DA------TDVAMALFSGI 337 (390)
T ss_pred Hhc-------------------------hHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-Cc------HHHHHHHHHHH
Confidence 111 44556777788899888777777777777765 34 89999999999
Q ss_pred HHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhccc
Q 008158 184 FTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKK 227 (575)
Q Consensus 184 ~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~ 227 (575)
.++|..+||.++|++.+..|++..|+..+++.+++++..+...+
T Consensus 338 ~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 338 FNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999999999999999999999888877777776655443
No 132
>PRK09952 shikimate transporter; Provisional
Probab=99.27 E-value=1.2e-10 Score=125.06 Aligned_cols=174 Identities=14% Similarity=0.059 Sum_probs=127.1
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHH
Q 008158 23 LGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVT 102 (575)
Q Consensus 23 ~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~ 102 (575)
....++....+|...++++.|+++.+|++......+.........++.++.|+++||+ |||+++..+.++..++.+...
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~-grr~~~~~~~~~~~~~~~~~~ 334 (438)
T PRK09952 256 IALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRF-GRRRVYITGALIGTLSAFPFF 334 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHH
Confidence 3456666777888889999999999999987766666666777788889999999995 999999888776655544333
Q ss_pred HHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHH
Q 008158 103 LTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYT 182 (575)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 182 (575)
.... . ......+++..++.+++.+...+..+++..|.+|.+. |+.+.++.+.
T Consensus 335 ~~~~-~---------------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~------r~tg~g~~~~ 386 (438)
T PRK09952 335 MALE-A---------------------QSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASY------RYSGAGVGYQ 386 (438)
T ss_pred HHHH-c---------------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcch------hHHHHhHHHH
Confidence 3210 0 0022333445566678888778888899999999876 8888888655
Q ss_pred H-HHHHHHHHhhhhhhccccc--cchhHhHHHHHHHHHHHHHHHhc
Q 008158 183 T-FTVVILITQTVLVYIQDSV--SWVIGFGIPTVLMIGAIILFLVG 225 (575)
Q Consensus 183 ~-~~ig~~~~~~v~~~l~~~~--gw~~~f~~~~~~~~i~~~~~~~~ 225 (575)
. ..+|+.++|.+.+++.+.. +|+..+.+.+++.+++.+..+..
T Consensus 387 ~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 387 VASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHc
Confidence 4 4589999999999987643 48888877777767666665543
No 133
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.26 E-value=1e-10 Score=124.02 Aligned_cols=162 Identities=12% Similarity=0.049 Sum_probs=126.1
Q ss_pred HHHhhhhHHHHHHHHhhhhCCChh---hHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhh
Q 008158 30 RLATIGLLANFMVYLLKEYHMNQT---SAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAW 106 (575)
Q Consensus 30 ~~~~~~~~~~l~~yl~~~l~~~~~---~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~ 106 (575)
......+...++.|+.+..+.... ..+.+..+..++..++.+..|+++||+ |||+.+..+..+..++.+......
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~- 309 (408)
T PRK09874 232 QVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRI-GPEKILITALIFSVLLLIPMSFVQ- 309 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhHHHHHHHHHHHHHHHHHhc-
Confidence 334344556677787765442221 245566667778888899999999995 999999988887777766655543
Q ss_pred cCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHH
Q 008158 107 LPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTV 186 (575)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i 186 (575)
+.+.+++.+++.|++.+...+...+.+.+..|+++ |++.+++++...++
T Consensus 310 -------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~ 358 (408)
T PRK09874 310 -------------------------TPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQI------AGRIFSYNQSFRDI 358 (408)
T ss_pred -------------------------cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCccc------ceeeehHHHHHHHH
Confidence 44567788889999999999988888888888766 89999999999999
Q ss_pred HHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHh
Q 008158 187 VILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLV 224 (575)
Q Consensus 187 g~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 224 (575)
|..+||.++|++.+..||+..|++.+++.+++.++.+.
T Consensus 359 g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 359 GNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred HHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999899999999888777766665544
No 134
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.26 E-value=1.6e-10 Score=126.02 Aligned_cols=148 Identities=16% Similarity=0.095 Sum_probs=115.0
Q ss_pred hhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 008158 35 GLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPK 114 (575)
Q Consensus 35 ~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 114 (575)
....++|.|+++++|++..+.+.+.+...++..++.+++|+++||+ |||+++..+..+..++.+.......
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~-------- 363 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWL-GTRKAYVCSLLISQLLIIPVFAIGG-------- 363 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHhhccc--------
Confidence 4567899999989999999999999999999999999999999995 9999988877666655444332210
Q ss_pred CCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhh
Q 008158 115 CDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTV 194 (575)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v 194 (575)
.+.+.+.+..++.+....+..+..+.++.|.+|+++ |++.+++++...++|..+||.+
T Consensus 364 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~g~~lgp~l 421 (496)
T PRK03893 364 ----------------ANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQ------RAAGLGFTYNVGALGGALAPIL 421 (496)
T ss_pred ----------------cHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHH------hhcccchhhhhhhHHHHHHHHH
Confidence 123333344444433333445667788899999877 9999999999999999999999
Q ss_pred hhhccccccchhHhHHHHH
Q 008158 195 LVYIQDSVSWVIGFGIPTV 213 (575)
Q Consensus 195 ~~~l~~~~gw~~~f~~~~~ 213 (575)
+|++.+.+||+..+...+.
T Consensus 422 ~g~l~~~~g~~~~~~~~~~ 440 (496)
T PRK03893 422 GALIAQRLDLGTALASLSF 440 (496)
T ss_pred HHHHhccCChHHHHHHHHH
Confidence 9999999999988765443
No 135
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.26 E-value=1.1e-10 Score=123.92 Aligned_cols=166 Identities=8% Similarity=-0.027 Sum_probs=127.8
Q ss_pred HHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHH
Q 008158 25 NETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLT 104 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~ 104 (575)
..++.....+.+..+++.|+++ .|++..+.+.+...+.++..++.++.|+++||+ |||+.+..+.+...++.+.....
T Consensus 228 ~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~ 305 (406)
T PRK11551 228 SYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRL-RPRRVVLLIYAGILASLAALAAA 305 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhc
Confidence 3444445566677778888875 799999999999999999999999999999995 99999887766666665555443
Q ss_pred hhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHH
Q 008158 105 AWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTF 184 (575)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 184 (575)
. +...+.+..++.|++.++..+...++..|.+|+++ |++..++++...
T Consensus 306 ~--------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~ 353 (406)
T PRK11551 306 P--------------------------SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQV------RGTGVGAAVAVG 353 (406)
T ss_pred C--------------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhh------hhhhhhHHHHhh
Confidence 2 33445566677788877778888899999999887 999999999999
Q ss_pred HHHHHHHhhhhhhccccc-cchhHhHHHHHHHHHHHHHHHh
Q 008158 185 TVVILITQTVLVYIQDSV-SWVIGFGIPTVLMIGAIILFLV 224 (575)
Q Consensus 185 ~ig~~~~~~v~~~l~~~~-gw~~~f~~~~~~~~i~~~~~~~ 224 (575)
.+|..++|.+.|++.+.. +|...++....+.+++.++.+.
T Consensus 354 ~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK11551 354 RLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALL 394 (406)
T ss_pred hHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998754 4555666555555555544443
No 136
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.25 E-value=6.6e-11 Score=124.08 Aligned_cols=166 Identities=13% Similarity=-0.010 Sum_probs=127.2
Q ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHH
Q 008158 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGM 98 (575)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~ 98 (575)
.+......++.....+....+++.|+++++|.+..+.+.+.....++..++.+++|+++||+ |||+.+..+..+..+..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~ 299 (394)
T TIGR00883 221 FLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRI-GRRPVLIIFTVLAALLA 299 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHHHH
Confidence 45555566666677777888899999999999999999999999999999999999999995 99998876555444333
Q ss_pred H-HH-HHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhh
Q 008158 99 L-TV-TLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSF 176 (575)
Q Consensus 99 ~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 176 (575)
. .. .... ..+...+....++.|++.+...+...+++.|.+|+++ |+++
T Consensus 300 ~~~~~~~~~------------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~~~~ 349 (394)
T TIGR00883 300 VPLLMALLD------------------------SGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEV------RYTG 349 (394)
T ss_pred HHHHHHHhc------------------------CCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccc------eeeE
Confidence 2 22 1211 0134556667778888888888999999999999877 8888
Q ss_pred hHHH-HHHHHHHHHHHhhhhhhcccccc-chhHhHHHHHHH
Q 008158 177 FNWY-YTTFTVVILITQTVLVYIQDSVS-WVIGFGIPTVLM 215 (575)
Q Consensus 177 ~~~~-~~~~~ig~~~~~~v~~~l~~~~g-w~~~f~~~~~~~ 215 (575)
.+.. .....+|..++|.++|++.+..| |+..++..+.+.
T Consensus 350 ~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~ 390 (394)
T TIGR00883 350 ASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALA 390 (394)
T ss_pred eeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHH
Confidence 8874 45557899899999999998888 887766555433
No 137
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.24 E-value=2e-10 Score=121.60 Aligned_cols=175 Identities=12% Similarity=0.101 Sum_probs=132.0
Q ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHH
Q 008158 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGM 98 (575)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~ 98 (575)
.+.+.+..++...+++++..+++.|+.+ +|++..+.+...+.+.++..++.++.|++.||+ |||+.+..+..+..++.
T Consensus 207 ~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~-~~~~~~~~~~~l~~~~~ 284 (393)
T PRK09705 207 AWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQ-DRRKLLMLALVLQLVGF 284 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHHHH
Confidence 3444445555667777888999999986 899999999999999999999999999999994 99999988887777776
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhH
Q 008158 99 LTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFN 178 (575)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 178 (575)
........ +...+ ...+.|++.+...+.......+.+++++ .|++.++
T Consensus 285 ~~~~~~~~-------------------------~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~-----~~g~~~g 332 (393)
T PRK09705 285 CGFIWLPL-------------------------QLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPA-----IAGKLVA 332 (393)
T ss_pred HHHHHccc-------------------------hHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHH-----HHHHHHH
Confidence 65443220 11112 2245688888888877777777775322 2899999
Q ss_pred HHHHHHHHHHHHHhhhhhhcccccc-chhHhHHHHHHHHHHHHHHHhccc
Q 008158 179 WYYTTFTVVILITQTVLVYIQDSVS-WVIGFGIPTVLMIGAIILFLVGKK 227 (575)
Q Consensus 179 ~~~~~~~ig~~~~~~v~~~l~~~~g-w~~~f~~~~~~~~i~~~~~~~~~~ 227 (575)
+.+...+++..++|.+.|++.+..| |+..|.+.+++.+++++..+...+
T Consensus 333 ~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (393)
T PRK09705 333 FMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAP 382 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999776 788888776666655555444333
No 138
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.24 E-value=9.5e-13 Score=143.63 Aligned_cols=189 Identities=15% Similarity=0.174 Sum_probs=3.0
Q ss_pred HHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 008158 31 LATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQL 110 (575)
Q Consensus 31 ~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~ 110 (575)
...++.......-+++.++++.++.|++.+.+.++..+..++..++++|. .|-|.+-.|.+++.+|++++++-+ +
T Consensus 16 ~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~g~~l~~lPh----f 90 (539)
T PF03137_consen 16 MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGLGSLLFALPH----F 90 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHHHHHHHhccH----h
Confidence 66677777788889999999999999999999999999999999999994 777899999999999999988733 2
Q ss_pred CCCCCCC--CC-------CCCCcc-------------------CCCcchhhHHHHHHHHHHHHhccCCccccccccccCC
Q 008158 111 HPPKCDV--AK-------PPFGQC-------------------KSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQF 162 (575)
Q Consensus 111 ~~~~~~~--~~-------~~~~~~-------------------~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~ 162 (575)
..+++.. .. ....-| .......+.+++++.++.|+|....++...+|+=|-.
T Consensus 91 ~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv 170 (539)
T PF03137_consen 91 LSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNV 170 (539)
T ss_dssp -------------------------------------------------------------SSS----------------
T ss_pred hcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecccc
Confidence 2222200 00 011111 1112224677899999999999999999999999999
Q ss_pred CCCCcccccchhhhhHHHHHHHHHHHHHHhhhhhhccc---------------------cc-cchhHhHHHHHHHHHHHH
Q 008158 163 DATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQD---------------------SV-SWVIGFGIPTVLMIGAII 220 (575)
Q Consensus 163 ~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~---------------------~~-gw~~~f~~~~~~~~i~~~ 220 (575)
++++ -...+++++....+|..+|..+++.... ++ .|...|++.+++.++..+
T Consensus 171 ~~~~------splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~ai 244 (539)
T PF03137_consen 171 SKKN------SPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAI 244 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccc------CccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 8877 7888999999999999999988886531 12 277777776666555555
Q ss_pred HHHhccceEE
Q 008158 221 LFLVGKKLYV 230 (575)
Q Consensus 221 ~~~~~~~~~~ 230 (575)
.++...|+.+
T Consensus 245 pl~~FPk~lp 254 (539)
T PF03137_consen 245 PLFFFPKKLP 254 (539)
T ss_dssp ----------
T ss_pred HHHcCCccCC
Confidence 4444444433
No 139
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.24 E-value=2e-10 Score=121.02 Aligned_cols=158 Identities=13% Similarity=0.177 Sum_probs=123.3
Q ss_pred HHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcC
Q 008158 29 ERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLP 108 (575)
Q Consensus 29 ~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~ 108 (575)
..+.+.....+++.|+++ .|.+.++.+.+.+...++..++.++.|+++||+ |||+++..+..+..++..... ..
T Consensus 212 ~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~~-~~--- 285 (381)
T PRK03633 212 SGIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRF-GRLLVLRVQVFVVILGSIAML-SQ--- 285 (381)
T ss_pred HHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc-CcHHHHHHHHHHHHHHHHHHh-hh---
Confidence 334444556778888875 699999999999999999999999999999995 999999888777776654432 11
Q ss_pred CCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHH
Q 008158 109 QLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVI 188 (575)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~ 188 (575)
......+++.|++.+...|...+...|..|+++ ++...+.++...++|.
T Consensus 286 -------------------------~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~lG~ 334 (381)
T PRK03633 286 -------------------------AAMAPALFILGAAGFTLYPVAMAWACEKVEHHE------LVAMNQALLLSYTVGS 334 (381)
T ss_pred -------------------------HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHH------HHHHHHHHHHHHHHHH
Confidence 123345666777777778888888899888765 7777888888889999
Q ss_pred HHHhhhhhhccccccchhHhHHHHHHHHHHHHHHH
Q 008158 189 LITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFL 223 (575)
Q Consensus 189 ~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~ 223 (575)
.+||.++|++.+..+|++.|.+.+.+.++..+..+
T Consensus 335 ~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 335 LLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLL 369 (381)
T ss_pred HHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999987776665554443
No 140
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.23 E-value=1.7e-10 Score=120.73 Aligned_cols=180 Identities=15% Similarity=0.080 Sum_probs=126.8
Q ss_pred chhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHH-HHHHHHHHH
Q 008158 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKT-ITFASIAAI 95 (575)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~-~~~~~~l~~ 95 (575)
|..+......++.....+....+++.|+++.+|.+..+.+++.+...++..++.+++|+++||+ |||+. +........
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~ 293 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLL-LRRGKSLVFARKTAI 293 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-hhcccchhHHHHHHH
Confidence 3445555666677777777888999999999999999999999999999999999999999995 98861 111111111
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhh
Q 008158 96 LGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINS 175 (575)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 175 (575)
++.+.......... .............+.+.+.+ ..+...++..|.+|+++ |++
T Consensus 294 ~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~g~ 347 (399)
T TIGR00893 294 IAGLVLSLLMFATN-------------------YVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNI------AGL 347 (399)
T ss_pred HHHHHHHHHHHHhc-------------------cchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhH------HHH
Confidence 22111111000000 00022223333333344444 78889999999999877 999
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhcccccc-chhHhHHHHHHHHHHHHHHH
Q 008158 176 FFNWYYTTFTVVILITQTVLVYIQDSVS-WVIGFGIPTVLMIGAIILFL 223 (575)
Q Consensus 176 ~~~~~~~~~~ig~~~~~~v~~~l~~~~g-w~~~f~~~~~~~~i~~~~~~ 223 (575)
.+++++...++|..++|.+.|++.+..| |+..|++.+++.+++.+..+
T Consensus 348 ~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 348 TGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred HHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999888 99999887776666555543
No 141
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.22 E-value=3e-09 Score=113.89 Aligned_cols=163 Identities=15% Similarity=0.118 Sum_probs=118.7
Q ss_pred HHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhc--cc--chHHHHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 008158 38 ANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTY--IG--RFKTITFASIAAILGMLTVTLTAWLPQLHPP 113 (575)
Q Consensus 38 ~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~--~G--rr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 113 (575)
.....|+++++|+++.+...+.+...+...+-+++ |.++|-+ +| ||+-++++.++..++.+.++....
T Consensus 10 ~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~Kp~~-g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~------- 81 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQLQRLSSLASLPWSIKPLY-GLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPA------- 81 (433)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHhCchHHhhhH-HhhcccccccCCcchHHHHHHHHHHHHHHHHHHhccc-------
Confidence 45567899999999999998888888777776554 9999986 34 444555566555555555554321
Q ss_pred CCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhh
Q 008158 114 KCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQT 193 (575)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~ 193 (575)
...+.....+..++..+|.+..-.+.-+...|...++. ..|+...++.+....+|.+++..
T Consensus 82 ---------------~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p----~~~g~lqS~~~~~~~~G~lv~~~ 142 (433)
T PF03092_consen 82 ---------------SESSAAIAVVLLFLASFGYAFADVAADALVVELARREP----ESRGDLQSFVWGVRSVGSLVGSL 142 (433)
T ss_pred ---------------ccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCC----chhHHHHHHHHHHHHHHHHHHHH
Confidence 01133445566677888888888888999999886544 22889999999999999999999
Q ss_pred hhhhccccccchhHhHHHHHHHHHHHHHHHhccc
Q 008158 194 VLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKK 227 (575)
Q Consensus 194 v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~ 227 (575)
++|++.+..++++.|.+..++..+..+..++..+
T Consensus 143 l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~ 176 (433)
T PF03092_consen 143 LSGPLLDSFGPQGVFLISAALPLLMLIVALFLLE 176 (433)
T ss_pred hhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999887766655554444433
No 142
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.22 E-value=1.4e-10 Score=122.41 Aligned_cols=152 Identities=15% Similarity=0.121 Sum_probs=119.5
Q ss_pred HHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhh
Q 008158 27 TFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAW 106 (575)
Q Consensus 27 ~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~ 106 (575)
.+......+...+++.|+.+++|++..+.+++.....++..++.++.|+++||+ |||+.+..+..+..+.........
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~- 325 (405)
T TIGR00891 248 LFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWL-GRRKAYVCSLLAGQLLIIPVFAIG- 325 (405)
T ss_pred HHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchhhhHHHHHHHHHHHHHHHHhC-
Confidence 333344455667889999999999999999999999999999999999999995 999998887765533222221111
Q ss_pred cCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHH
Q 008158 107 LPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTV 186 (575)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i 186 (575)
.+.+.+.+..++.++..++..+..++++.|.+|+++ |++.+++.+...++
T Consensus 326 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~~ 375 (405)
T TIGR00891 326 ------------------------ANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQ------RAAGLGFTYQLGNL 375 (405)
T ss_pred ------------------------CchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcch------hHHHhhHHHHHHHH
Confidence 033445566667777777777888889999999877 99999999999999
Q ss_pred HHHHHhhhhhhcccccc-chhHhHH
Q 008158 187 VILITQTVLVYIQDSVS-WVIGFGI 210 (575)
Q Consensus 187 g~~~~~~v~~~l~~~~g-w~~~f~~ 210 (575)
|..++|.+.|++.+..| |+..+..
T Consensus 376 g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 376 GGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHHHHHHHHHhccccchhHHh
Confidence 99999999999999888 8766553
No 143
>PRK12382 putative transporter; Provisional
Probab=99.22 E-value=1.2e-10 Score=123.10 Aligned_cols=158 Identities=15% Similarity=0.155 Sum_probs=127.4
Q ss_pred HHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 008158 31 LATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQL 110 (575)
Q Consensus 31 ~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~ 110 (575)
..+..+..+++.|+++ .|++ +.+.....+.++..++.++.|++.||+ ||||.+..+..+..++.+...+..
T Consensus 230 ~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~----- 300 (392)
T PRK12382 230 VGFAVIGTFVSLYFAS-KGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRF-GGVKVAIVSLLVETVGLLLLWLAP----- 300 (392)
T ss_pred HHHhHHHHHHHHHHHh-cCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHHHcc-----
Confidence 4444555667777764 4654 355666777788889999999999995 999999998888888877666543
Q ss_pred CCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHH
Q 008158 111 HPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILI 190 (575)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~ 190 (575)
+...+++..++.|++.+...+.......|.+|+++ |++.+++++...++|..+
T Consensus 301 ---------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~g~~i 353 (392)
T PRK12382 301 ---------------------TAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQV------RGTALGGYAAFQDIAYGV 353 (392)
T ss_pred ---------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHH
Confidence 34556778888999998888888888889998877 999999999999999999
Q ss_pred HhhhhhhccccccchhHhHHHHHHHHHHHHHHHh
Q 008158 191 TQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLV 224 (575)
Q Consensus 191 ~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 224 (575)
+|.+.|++.+..||+..|.+.+++.+++.++.+.
T Consensus 354 g~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 354 SGPLAGMLATSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999888777776666553
No 144
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.21 E-value=8.5e-11 Score=125.53 Aligned_cols=155 Identities=8% Similarity=0.030 Sum_probs=123.0
Q ss_pred hHHHHHHHHhhhh---CCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 008158 36 LLANFMVYLLKEY---HMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHP 112 (575)
Q Consensus 36 ~~~~l~~yl~~~l---~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 112 (575)
....++.|+.+.+ +.+..+.+.+.++..++..++.+++|+++||+ |||+.+..+..+..++.++.+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~l~~~~~~l~~~~~------- 313 (420)
T PRK09528 242 FDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRI-GAKNALLLAGTIMAVRIIGSGFAT------- 313 (420)
T ss_pred HHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcchhhHHHHHHHHHHHHHHHhcc-------
Confidence 3345677766543 56667889999999999999999999999995 999999998888888888777654
Q ss_pred CCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHH-HHHHHHHHHHHH
Q 008158 113 PKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNW-YYTTFTVVILIT 191 (575)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~ig~~~~ 191 (575)
+.+.+++.+++.|++.+...+....++.|.+|++. |+...+. ++...++|..++
T Consensus 314 -------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~a~~~~~~~~~~~~lg~~ig 368 (420)
T PRK09528 314 -------------------GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRL------SATIYLVGFQFAKQLGAVFL 368 (420)
T ss_pred -------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------eeeeeeehHHHHHHHHHHHH
Confidence 45567788888999888877777788899998765 6766655 567788999999
Q ss_pred hhhhhhccccccchhHhHHHHHHHHHHHHHHH
Q 008158 192 QTVLVYIQDSVSWVIGFGIPTVLMIGAIILFL 223 (575)
Q Consensus 192 ~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~ 223 (575)
|.+.|++.+..||+..|.+.+++.++..++.+
T Consensus 369 ~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 400 (420)
T PRK09528 369 STLAGNLYDSIGFQGTYLILGGIVLLFTLISV 400 (420)
T ss_pred HHHHHHHHHhhCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999976665554444433
No 145
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.20 E-value=2e-10 Score=122.61 Aligned_cols=155 Identities=8% Similarity=-0.023 Sum_probs=127.6
Q ss_pred hhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 008158 34 IGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPP 113 (575)
Q Consensus 34 ~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 113 (575)
.++..+++.|+++.+|.+..+.+++.+...++..++.++.|++.||. ++++.+..+.++..++.+...+..
T Consensus 240 ~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~~-------- 310 (417)
T PRK10489 240 SAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSA-RPGLLMLLSTLGSFLAVGLFGLMP-------- 310 (417)
T ss_pred HhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhcc-CcchHHHHHHHHHHHHHHHHHccc--------
Confidence 45667788999888999999999999999999999999999999994 888888888877777776665533
Q ss_pred CCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhh
Q 008158 114 KCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQT 193 (575)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~ 193 (575)
+.....+..++.|++.+...+...+++.|..|++. |++.+++++...++|..+||.
T Consensus 311 ------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~~g~~ 366 (417)
T PRK10489 311 ------------------MWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEM------LGRINGLWTAQNVTGDAIGAA 366 (417)
T ss_pred ------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHH------HHHHHHHHHHHHhhhHhHHHH
Confidence 44556677788888888777777788899999876 999999999999999999999
Q ss_pred hhhhccccccchhHhHHHHHHHHHHHHH
Q 008158 194 VLVYIQDSVSWVIGFGIPTVLMIGAIIL 221 (575)
Q Consensus 194 v~~~l~~~~gw~~~f~~~~~~~~i~~~~ 221 (575)
++|++.+..|++..+++.+.+.++..++
T Consensus 367 l~G~l~~~~g~~~~~~~~~~~~~~~~~~ 394 (417)
T PRK10489 367 LLGGLGAMMTPVASASASGFGLLIIGVL 394 (417)
T ss_pred HHHHHHHHhchhhHHHHHHHHHHHHHHH
Confidence 9999999889888887666554443333
No 146
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.19 E-value=3e-10 Score=122.01 Aligned_cols=175 Identities=8% Similarity=-0.028 Sum_probs=116.6
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcc-cc-hHHHHHHHHHHHHH
Q 008158 20 PYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYI-GR-FKTITFASIAAILG 97 (575)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~-Gr-r~~~~~~~~l~~~~ 97 (575)
+.+....++....++++.++++.|+.+++|++..+.+...+.+.++..++.+++|+++||+. ++ ++......+...++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~ 325 (434)
T PRK11663 246 WLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLS 325 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHH
Confidence 33344455555556677788999999899999999999999999999999999999999942 22 23222222222222
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhh
Q 008158 98 MLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFF 177 (575)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 177 (575)
......... . +.....+..+..|++.............|.+|+++ |++..
T Consensus 326 ~~~~~~~~~-----------------------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~ 375 (434)
T PRK11663 326 VGSLWLMPF-----------------------A-SYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEA------AGAAT 375 (434)
T ss_pred HHHHHHccc-----------------------c-cHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhh------HHhHH
Confidence 111111110 0 12222233333444322222223445678888766 99999
Q ss_pred HHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHh
Q 008158 178 NWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLV 224 (575)
Q Consensus 178 ~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 224 (575)
++.+...++|..++|.+.|++.+..||+..|++.+++.+++.+..+.
T Consensus 376 g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 422 (434)
T PRK11663 376 GFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLP 422 (434)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999887776665554443
No 147
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.19 E-value=4.4e-10 Score=121.42 Aligned_cols=170 Identities=16% Similarity=0.128 Sum_probs=131.5
Q ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhc-ccchHHHHHHH--HHHH
Q 008158 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTY-IGRFKTITFAS--IAAI 95 (575)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~-~Grr~~~~~~~--~l~~ 95 (575)
.+..+...++..++++...++++.|++ ++|++..+.+++.++..++..++.+++|+++||+ +++|+....+. ++..
T Consensus 243 ~~~~~~~~~l~~~~~~~~~~~l~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 321 (455)
T TIGR00892 243 FLVYLSGNVIMFLGFFAPIIFLVPYAK-DKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNG 321 (455)
T ss_pred HHHHHHHHHHHHHHccchHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHH
Confidence 344444556666677777888899986 4799999999999999999999999999999983 23444333333 3333
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhh
Q 008158 96 LGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINS 175 (575)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 175 (575)
++.+...... +.+.+++.+++.|++.+...++..+++.|.+|+++ +++
T Consensus 322 l~~ll~~~~~--------------------------~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~------~g~ 369 (455)
T TIGR00892 322 LTHLLCALAG--------------------------DYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQR------FSS 369 (455)
T ss_pred HHHHHHHHhc--------------------------hHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHH------Hhh
Confidence 3333443332 45667888999999999999999999999999877 999
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhccccc-cchhHhHHHHHHHHHHHHH
Q 008158 176 FFNWYYTTFTVVILITQTVLVYIQDSV-SWVIGFGIPTVLMIGAIIL 221 (575)
Q Consensus 176 ~~~~~~~~~~ig~~~~~~v~~~l~~~~-gw~~~f~~~~~~~~i~~~~ 221 (575)
.+++++...++|..+||.++|++.+.. +|++.|++.+++.+++.+.
T Consensus 370 ~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 370 AVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLF 416 (455)
T ss_pred HHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHH
Confidence 999999999999999999999998877 5999999877766655543
No 148
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.18 E-value=6e-10 Score=117.53 Aligned_cols=170 Identities=9% Similarity=0.016 Sum_probs=140.6
Q ss_pred chhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHH
Q 008158 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (575)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~ 96 (575)
|..+..+...++...+.+...++.++|+++ +|.+..+.+.+.+...++..+..++.|++.||+ |+|+.+..+.++..+
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~-g~~~~l~~~~~~~~~ 282 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNC-SARDLLLISAIACVG 282 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhC-CHHHHHHHHHHHHHH
Confidence 334555556666677777888899999964 899999999999998899999999999999995 999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhh
Q 008158 97 GMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSF 176 (575)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 176 (575)
..+..++++ +.+.+++...++|+..+...+....++.+. |+++ |+++
T Consensus 283 ~~~~~~~~~--------------------------~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~------~~~~ 329 (382)
T TIGR00902 283 RWAIIGAIE--------------------------AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSE------IAKL 329 (382)
T ss_pred HHHHHHhHh--------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhh------HHHH
Confidence 988887755 567788889999999999999999999987 7766 8888
Q ss_pred hHHHHH-HHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHH
Q 008158 177 FNWYYT-TFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILF 222 (575)
Q Consensus 177 ~~~~~~-~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~ 222 (575)
.+.++. ...+|..+++.++|++.+.+|+ ..|++.+++.++++++.
T Consensus 330 q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~~ 375 (382)
T TIGR00902 330 QALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFLI 375 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHH
Confidence 888764 5679999999999999998886 56776666665555443
No 149
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.18 E-value=2.7e-10 Score=123.04 Aligned_cols=174 Identities=15% Similarity=0.053 Sum_probs=118.2
Q ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhccc--chHHH-HHHHHHHH
Q 008158 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIG--RFKTI-TFASIAAI 95 (575)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~G--rr~~~-~~~~~l~~ 95 (575)
.+......++.....++...++|.|++++.|++..+++.+...+.++..++.+++|+++|| ++ ||+.. .....+..
T Consensus 255 ~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr-~~~~r~~~~~~~~~~l~~ 333 (452)
T PRK11273 255 LWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDK-VFRGNRGATGVFFMTLVT 333 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HccCCcchHHHHHHHHHH
Confidence 3344455555566667888999999999999999999999999999999999999999999 54 44432 22222333
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhh
Q 008158 96 LGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINS 175 (575)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 175 (575)
++.+...+... .+.....+..++.|.+..........+..|.+|+++ |++
T Consensus 334 ~~~~~~~~~~~------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~ 383 (452)
T PRK11273 334 IATIVYWLNPA------------------------GNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKA------AGT 383 (452)
T ss_pred HHHHHHHHhcc------------------------cChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhh------hhh
Confidence 33332222110 022223334444444332222223345678999877 999
Q ss_pred hhHHHHHHHHHHHHH-HhhhhhhccccccchhHhHHHHHHHHHHHHHHH
Q 008158 176 FFNWYYTTFTVVILI-TQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFL 223 (575)
Q Consensus 176 ~~~~~~~~~~ig~~~-~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~ 223 (575)
++++.+...++|+.+ +|.+.|++.+..||+..|++.+++.+++++...
T Consensus 384 ~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 384 AAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLI 432 (452)
T ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 999999988888655 799999999999999999877776666655544
No 150
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.18 E-value=7e-10 Score=117.84 Aligned_cols=174 Identities=10% Similarity=0.014 Sum_probs=126.8
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHH-HHHHHHHHHH
Q 008158 20 PYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTIT-FASIAAILGM 98 (575)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~-~~~~l~~~~~ 98 (575)
+......++....+++..+++|.|++ ++|++..+.+.+.+...++..++.++.|+++||+ |||+.+. .+.+...++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~l~~~~~~ 302 (402)
T TIGR00897 225 LLGGMVRIINTIGLFGFAVFLPMFVA-ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKL-GWMNTVRWFGGVGCGIFT 302 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHHHH
Confidence 34445566667777888889998885 5899999999999999999999999999999995 9988764 2333333333
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhH
Q 008158 99 LTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFN 178 (575)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 178 (575)
+.+....... ..+.+..++..++.|++.+...+. .....|..| ++ |++.++
T Consensus 303 ~~l~~~~~~~---------------------~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~-~~------~g~~~g 353 (402)
T TIGR00897 303 LALYYIPQHF---------------------GHSFAVALIIAIALGIFLAGYVPL-AAVFPTLAP-KH------KGAAMS 353 (402)
T ss_pred HHHHHHHHcc---------------------CCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCc-ch------hHHHHH
Confidence 3332221000 013445566777778877766553 445556543 45 999999
Q ss_pred HHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHh
Q 008158 179 WYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLV 224 (575)
Q Consensus 179 ~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 224 (575)
+++...++|..++|.++|++.+..||+..|++.+++.+++.++..+
T Consensus 354 ~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 354 VLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999888777666665544
No 151
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.17 E-value=7.4e-10 Score=113.48 Aligned_cols=129 Identities=14% Similarity=-0.019 Sum_probs=89.6
Q ss_pred hHHHHHHHHhhhhCC---Ch----hhHHHHHHHHHHHHHHHhhhhHHHhhhcccchH-HHHHHHHHHHHHHHHHHHHhhc
Q 008158 36 LLANFMVYLLKEYHM---NQ----TSAANILNIWGGVTNFAPLLGAFISDTYIGRFK-TITFASIAAILGMLTVTLTAWL 107 (575)
Q Consensus 36 ~~~~l~~yl~~~l~~---~~----~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~-~~~~~~~l~~~~~~~~~~~~~~ 107 (575)
+.+++|+|+++..+- ++ +-.+...++..+...+..|+-|-++|.. |+|| .+-...++.++.++.+.++.+
T Consensus 34 tt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~-g~Rk~~~~~f~~i~i~~~~~L~~i~~- 111 (438)
T COG2270 34 TTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYP-GPRKKFFGFFTAIGIISTFLLWFIPP- 111 (438)
T ss_pred eeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccC-CCcchHHHHHHHHHHHHHHHHHHhCC-
Confidence 556889999987654 32 4456667788888889999999999996 8665 555555556666666666541
Q ss_pred CCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHH
Q 008158 108 PQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVV 187 (575)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig 187 (575)
..+.....+..++..++..+......++..|..++++ -++..+.-+...++|
T Consensus 112 ----------------------~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~------~~riS~lg~~~gylg 163 (438)
T COG2270 112 ----------------------GSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDN------MGRISGLGWALGYLG 163 (438)
T ss_pred ----------------------CchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccc------cCccccccccccccc
Confidence 1255666777778899999999999999999998766 344444444445555
Q ss_pred HHHHhhh
Q 008158 188 ILITQTV 194 (575)
Q Consensus 188 ~~~~~~v 194 (575)
+.+.-++
T Consensus 164 s~i~li~ 170 (438)
T COG2270 164 SVILLIF 170 (438)
T ss_pred chHHHHH
Confidence 5544433
No 152
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.16 E-value=5.3e-10 Score=120.49 Aligned_cols=185 Identities=17% Similarity=0.098 Sum_probs=149.8
Q ss_pred cchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccch--HHHHHHHHH
Q 008158 16 WKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRF--KTITFASIA 93 (575)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr--~~~~~~~~l 93 (575)
.|.+...++..++-+-+...+......|.++++|++.++...+..+..+...+++++.|++.|| +|.| ++++.+.++
T Consensus 280 ~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r-~g~k~~~~l~~~l~~ 358 (477)
T PF11700_consen 280 LRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDR-FGPKTKRTLLISLIL 358 (477)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCchhHHHHHHHHH
Confidence 3566666777777777878889999999999999999999999999999999999999999999 5998 888888877
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccch
Q 008158 94 AILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGI 173 (575)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 173 (575)
..+..+...+.- .+.. .+..+.+.+++.-++.|+..|..++..-++.++..|+++ .
T Consensus 359 ~~~i~~~g~~G~-~~~~-----------------~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~------e 414 (477)
T PF11700_consen 359 WIIIPLYGLFGF-WPSF-----------------FGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGR------E 414 (477)
T ss_pred HHHHHHHHHHHh-hhcc-----------------cCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCch------h
Confidence 744333332210 0000 011255668888889999999999999999999999977 8
Q ss_pred hhhhHHHHHHHHHHHHHHhhhhhhcccccc-chhHhHHHHHHHHHHHHHHHhc
Q 008158 174 NSFFNWYYTTFTVVILITQTVLVYIQDSVS-WVIGFGIPTVLMIGAIILFLVG 225 (575)
Q Consensus 174 ~~~~~~~~~~~~ig~~~~~~v~~~l~~~~g-w~~~f~~~~~~~~i~~~~~~~~ 225 (575)
+.++++|.......+.+||.+.|.+.+..| -|++++...++.++++++.+..
T Consensus 415 ~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v 467 (477)
T PF11700_consen 415 AEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFV 467 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999988776 8888887777777777766543
No 153
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.16 E-value=9.2e-10 Score=112.63 Aligned_cols=84 Identities=10% Similarity=-0.098 Sum_probs=69.8
Q ss_pred hhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhhhcccc----------
Q 008158 132 QLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDS---------- 201 (575)
Q Consensus 132 ~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~---------- 201 (575)
++..++++.++.|.|.+..++..++++++..|+++ +++.+++...+..+|..++|.+++.+...
T Consensus 9 ~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~------~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~ 82 (310)
T TIGR01272 9 YYVLFLGALFVLASGLTILQVAANPYVSILGPIET------AASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVA 82 (310)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcch------HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhh
Confidence 67889999999999999999999999999998877 89999999999999999999999876521
Q ss_pred ------ccchhHhHHHHHHHHHHHHH
Q 008158 202 ------VSWVIGFGIPTVLMIGAIIL 221 (575)
Q Consensus 202 ------~gw~~~f~~~~~~~~i~~~~ 221 (575)
.+|+++|++.+....+..++
T Consensus 83 ~~~~~~~~~~~~yl~ia~~~~~~~i~ 108 (310)
T TIGR01272 83 TANAEAAKVHTPYLLLAGALAVLAII 108 (310)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899988555443333333
No 154
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.16 E-value=1.3e-09 Score=112.65 Aligned_cols=179 Identities=13% Similarity=0.070 Sum_probs=146.4
Q ss_pred cchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHH
Q 008158 16 WKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAI 95 (575)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~ 95 (575)
.+.++..+...++...+.|..++++-+++++..|+|.+..+++...|.++..++.+++|+++|| +.|+++.....+..
T Consensus 210 ~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~a 287 (394)
T COG2814 210 RPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLLA 287 (394)
T ss_pred CchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHHH
Confidence 3556677778888889999999999999999999999999999999999999999999999999 78888888888888
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhh
Q 008158 96 LGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINS 175 (575)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 175 (575)
+..+.+.+..+ +.+...+..++.|+...........-.++..|+ . +..
T Consensus 288 ~~~l~l~~~~~-------------------------~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~-~------~~~ 335 (394)
T COG2814 288 LALLALTFTGA-------------------------SPALALALLFLWGFAFSPALQGLQTRLARLAPD-A------ADL 335 (394)
T ss_pred HHHHHHHHhcc-------------------------hHHHHHHHHHHHHHHhhhhhhHHHHHhcccCCC-c------hHH
Confidence 77777766542 344555555667777666555555555553333 3 799
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhccce
Q 008158 176 FFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKL 228 (575)
Q Consensus 176 ~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~ 228 (575)
+.+++....|+|..+|..++|.+.+++|+....++.+++.++++++.+...++
T Consensus 336 a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~~ 388 (394)
T COG2814 336 AGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSARK 388 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999888888877665443
No 155
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.15 E-value=9.2e-10 Score=118.45 Aligned_cols=167 Identities=12% Similarity=0.058 Sum_probs=119.2
Q ss_pred hHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 008158 36 LLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKC 115 (575)
Q Consensus 36 ~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 115 (575)
......+++.+++|++..+.++......++..++.+++|+++||+ |||+.+..+.++..++.++.++...... .+
T Consensus 302 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-- 376 (481)
T TIGR00879 302 AIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF-GRRPLLLIGAAGMAICLFVLGILGASFV--TG-- 376 (481)
T ss_pred ehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHhhccc--CC--
Confidence 334445566668899998888899999999999999999999995 9999999988888887777664221000 00
Q ss_pred CCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhh
Q 008158 116 DVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVL 195 (575)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~ 195 (575)
.....+...+....+..+....+..+....+..|.+|+++ |+...++.+...++|.+++|.+.
T Consensus 377 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~~~~~~~~~~~~~lg~~i~~~~~ 439 (481)
T TIGR00879 377 -----------SSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSL------RPKGISIAVAANWLANFIVGFLF 439 (481)
T ss_pred -----------cccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHH------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000012222222222222233345666777899999877 99999999999999999999999
Q ss_pred hhccccccchhHhHHHHHHHHHHHHHHHh
Q 008158 196 VYIQDSVSWVIGFGIPTVLMIGAIILFLV 224 (575)
Q Consensus 196 ~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 224 (575)
+++.+..+|++.|++.+++.+++.++.++
T Consensus 440 ~~~~~~~~~~~~f~~~~~~~~~~~i~~~~ 468 (481)
T TIGR00879 440 PTMLESIGVGGVFIFFGGLNVLGLIFVYF 468 (481)
T ss_pred HHHHHhcCccceehhHHHHHHHHHHHHhe
Confidence 99988889999998877776666655544
No 156
>PRK15075 citrate-proton symporter; Provisional
Probab=99.13 E-value=9.3e-10 Score=118.15 Aligned_cols=152 Identities=12% Similarity=0.022 Sum_probs=108.9
Q ss_pred HHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHH-HHH
Q 008158 24 GNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGML-TVT 102 (575)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~-~~~ 102 (575)
...++....++.+..++|.|+++.+|++..+.+++...+.++..++.+++|+++||+ |||+++..+..+..+... ...
T Consensus 245 ~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~ 323 (434)
T PRK15075 245 LMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRI-GRRPVLIAFTVLAILTAYPALS 323 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHH
Confidence 334445566777888899999988999999999988888899999999999999995 999988776554433221 111
Q ss_pred HHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHH
Q 008158 103 LTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYT 182 (575)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 182 (575)
.... ........+...+.+++.+...+....+..|.+|++. |+..+++.+.
T Consensus 324 ~~~~-----------------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~------rg~~~g~~~~ 374 (434)
T PRK15075 324 WLVA-----------------------APSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEV------RTAGFSLAYS 374 (434)
T ss_pred HHHc-----------------------CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCc------cchheeHHHH
Confidence 1110 0022223333444566666666666788899999887 9999998655
Q ss_pred HHH-HHHHHHhhhhhhccccccch
Q 008158 183 TFT-VVILITQTVLVYIQDSVSWV 205 (575)
Q Consensus 183 ~~~-ig~~~~~~v~~~l~~~~gw~ 205 (575)
..+ +++.++|.+.|++.+..|++
T Consensus 375 ~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 375 LATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHHHHHhhhHHHHHHHHHHhcCCc
Confidence 544 45778999999999887854
No 157
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.13 E-value=1.4e-09 Score=118.56 Aligned_cols=172 Identities=10% Similarity=0.076 Sum_probs=123.2
Q ss_pred HHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHH-HHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHh
Q 008158 27 TFERLATIGLLANFMVYLLKEYHMNQTSAANILN-IWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTA 105 (575)
Q Consensus 27 ~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~-~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~ 105 (575)
++-....+....+.++|+.+++|++..+.+.+.. ...++..++.+++|+++||+ |||+.+..+.++..++.+......
T Consensus 232 ~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~-g~~~~l~i~~~l~~l~~l~~~~l~ 310 (491)
T PRK11010 232 VLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRL-SLFRALMIFGILQGVSNAGYWLLS 310 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555556677888988889999999999875 55678999999999999995 999988776666555443332211
Q ss_pred hcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHH
Q 008158 106 WLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFT 185 (575)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 185 (575)
..+ .+...+.+..++..++.|...+...++..+..+++. +++.+++.+...+
T Consensus 311 ~~~----------------------~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~------~~t~~gl~~s~~~ 362 (491)
T PRK11010 311 ITD----------------------KNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSF------SATQFALLSALSA 362 (491)
T ss_pred hcc----------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC------cHHHHHHHHHHHH
Confidence 000 022333444444444444444555777778887766 7888999999999
Q ss_pred HHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhccc
Q 008158 186 VVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKK 227 (575)
Q Consensus 186 ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~ 227 (575)
+|..+++.+.|++.+..||+..|.+.+++.++++++.+..++
T Consensus 363 lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 363 VGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999989889999999999999999888888877776665543
No 158
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.11 E-value=4e-08 Score=105.02 Aligned_cols=362 Identities=14% Similarity=0.139 Sum_probs=211.8
Q ss_pred cchhHHHHHHHHHHHHHhhhhH---HHHHHHHhhhhCCChhh-HHHHHHHH----HHHHHHHhhhhHHHhhhcccchHHH
Q 008158 16 WKAMPYILGNETFERLATIGLL---ANFMVYLLKEYHMNQTS-AANILNIW----GGVTNFAPLLGAFISDTYIGRFKTI 87 (575)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~---~~l~~yl~~~l~~~~~~-~~~i~~~~----~~~~~~~~~~~G~laD~~~Grr~~~ 87 (575)
-..+.-+....+...++++... .+...+.....+.+..+ .+...... .+...+.++..|.++||+ |||..+
T Consensus 17 ~~~~~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~-grk~~L 95 (463)
T KOG2816|consen 17 LASMRHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRY-GRKVVL 95 (463)
T ss_pred cchhhHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhh-hhhhhH
Confidence 3445555566666666665444 66677777666554333 22333333 567788889999999996 999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHH--hccCCccccccccccCCCCC
Q 008158 88 TFASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSI--GTGGIRPCSIPFGVDQFDAT 165 (575)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~--g~g~~~~~~~~~~~~~~~~~ 165 (575)
........+..+...+.. +++++ +.++ +.+.+.+...++++|....+
T Consensus 96 ~~~~~~~~l~~~~~~~~~----------------------------~~~~~---~~~l~g~~~~~~s~~~a~vadis~~~ 144 (463)
T KOG2816|consen 96 LLPLFGTILPALCLLFQG----------------------------YWFFL---LLGLSGGFSAIFSVGFAYVADISSEE 144 (463)
T ss_pred HHHHHHHHHhHHHHHHHH----------------------------HHHhh---hcccccchhhhhhhhhhheeeccchh
Confidence 998888888877776632 23333 3333 34556677888999999887
Q ss_pred CcccccchhhhhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhccceEEeeCCCCCcchhHHHH
Q 008158 166 TDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQV 245 (575)
Q Consensus 166 ~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (575)
+ |...+++.+.....+..++|..++++.+..|.-..|.+.++..++..+..++..|+...++.+++ .
T Consensus 145 ~------R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~-~------ 211 (463)
T KOG2816|consen 145 E------RSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSD-A------ 211 (463)
T ss_pred H------HHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccccc-c------
Confidence 7 99999999999999999999999999998999999998888877777665544443211111100 0
Q ss_pred HHHHHHhhcccCCCCCCCCCccccCCCCcccccccCCCcchhhhhhhhhhhccCCCCCCCCCCCCccccchhhHHHhHhh
Q 008158 246 LVAAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKC 325 (575)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (575)
..++ ..+. .....+..+ +++.... ....+.
T Consensus 212 -----~~~~-~~~~--------------------~~~~~~~~~----------------------~~~~~~~--~~~~r~ 241 (463)
T KOG2816|consen 212 -----TLRE-LTPG--------------------SLDSSHVAD----------------------AFQSLTK--VGPDRL 241 (463)
T ss_pred -----cccc-cCCC--------------------cccchhhhh----------------------hhhhhcc--cCCCcc
Confidence 0000 0000 000000000 0000000 001111
Q ss_pred hhhhHHHHHHHHHHHHhhccccceeeeecccccccCCCcccc-Cccccccc----hhHhhHhhhhcccchhHHHhhhhhc
Q 008158 326 LIKIIPIWAAGIISLTSISQQGTFTVSQAMKMNRHLGPKFQI-PPGTVGVI----SMITIGLWLPFYDTVLVPALRKITK 400 (575)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~-~~~~~~~i----~~~~~~i~~~~~~~~~~~~~~r~~~ 400 (575)
.+..+ .......+.......... ..+.+..++ +.. ..+.+... ..+..++..|+ +.+.++.
T Consensus 242 ~l~l~--l~~~~~~~~~~~~~~~~~---~~yl~~~f~--w~~~~~s~~~~~~~~~~~i~~l~~~~~-------l~~~l~~ 307 (463)
T KOG2816|consen 242 LLLLL--LVAFLSSLPEAGGASDVL---LLYLKAKFG--WNKKEFSDLLSLVSILGIISQLLLLPL-------LSSILGE 307 (463)
T ss_pred chHHH--HHHHHHHHHHhcCceeEE---EEEEeeecC--cCHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHhh
Confidence 11111 111111111111111011 112222221 111 11112222 22223332222 2333332
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchhH
Q 008158 401 HEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMK 480 (575)
Q Consensus 401 r~~~~~~~~~i~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~r 480 (575)
| +.+.+|+..-.+...+.+++ ++.|.+..... .........|...+++...+.++.+
T Consensus 308 ~-------~~i~lGl~~~~~~~~~~af~---------------~~~w~~~~~~v-~~~~~~~~~pa~~s~~s~~v~~~e~ 364 (463)
T KOG2816|consen 308 K-------RLISLGLLSEFLQLLLFAFA---------------TETWMMFAAGV-VVALAGIVFPAIRAFASILVSPEEQ 364 (463)
T ss_pred h-------hHhhHHHHHHHHHHHHHHHh---------------ccchhhhHHHH-HHHhhcchhHHHHhHHHhhcccccc
Confidence 2 36888999999998888876 34445444433 3445568899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 008158 481 SIANSLLFCSFGFASYLSSLLITIVHGVT 509 (575)
Q Consensus 481 g~~~g~~~~~~~lg~~l~~~l~~~i~~~~ 509 (575)
|+..++......+.+.+++.+.+.+...+
T Consensus 365 g~v~~~is~i~~l~~~~~~~~~~~i~~~t 393 (463)
T KOG2816|consen 365 GKVFGIISGIEGLSGVVSPALYGNIFALT 393 (463)
T ss_pred cchhhHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 99999999999999999999988887654
No 159
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.10 E-value=2e-09 Score=115.52 Aligned_cols=166 Identities=14% Similarity=-0.015 Sum_probs=109.2
Q ss_pred HHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHH-Hhh
Q 008158 28 FERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTL-TAW 106 (575)
Q Consensus 28 ~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~-~~~ 106 (575)
+....+|++.+++|.|+.+.+|++..+.+...++..+...++.++.|+++||+ |||+++..+.++..+....... ...
T Consensus 254 ~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~~~ 332 (432)
T PRK10406 254 AGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKI-GRRTSMLCFGSLAALFTVPILSALQN 332 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHHc
Confidence 34667788899999999999999999999988888888888889999999995 9999887766654333322211 110
Q ss_pred cCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHH
Q 008158 107 LPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTV 186 (575)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i 186 (575)
..+....+....+.+++.+...+....+..|.+|++. |++++++.+...++
T Consensus 333 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~------r~t~~g~~~~~g~~ 383 (432)
T PRK10406 333 -----------------------VSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQV------RALGVGLSYAVANA 383 (432)
T ss_pred -----------------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCc------cchhhhHHHHHHHH
Confidence 0011111111122223333333456678899999988 99999998877654
Q ss_pred -HHHHHhhhhhhcccccc-chhHhHHHHHHHHHHHHHHHh
Q 008158 187 -VILITQTVLVYIQDSVS-WVIGFGIPTVLMIGAIILFLV 224 (575)
Q Consensus 187 -g~~~~~~v~~~l~~~~g-w~~~f~~~~~~~~i~~~~~~~ 224 (575)
++...|.+.+++.. .| |...+++.++..+++++..++
T Consensus 384 ~~g~~~p~~~~~l~~-~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 384 LFGGSAEYVALSLKS-IGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred HHHhHHHHHHHHHHH-hCCCcHHHHHHHHHHHHHHHHHHH
Confidence 34457777776644 45 555566555555555555444
No 160
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.10 E-value=1.4e-08 Score=111.61 Aligned_cols=206 Identities=14% Similarity=0.191 Sum_probs=149.6
Q ss_pred chhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHH
Q 008158 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (575)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~ 96 (575)
+.+..+++...+.--...+.+....+-+.+.++++.++.|++.+.+-++..+...+-.+.+-|. -|-|.+-++.+++++
T Consensus 96 k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~-HrPr~Ig~G~~~m~l 174 (735)
T KOG3626|consen 96 KMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG-HRPRWIGIGLVLMGL 174 (735)
T ss_pred chHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhcccc-CccceeeechhHHHH
Confidence 4445555544444444457788888889999999999999999999999999999999999995 788899999999999
Q ss_pred HHHHHHHHhhcCC-CC-----------CC-------------CCCCCCCCCCccCCCcc-hhhHHHHHHHHHHHHhccCC
Q 008158 97 GMLTVTLTAWLPQ-LH-----------PP-------------KCDVAKPPFGQCKSANS-MQLGVLVMGLGLLSIGTGGI 150 (575)
Q Consensus 97 ~~~~~~~~~~~~~-~~-----------~~-------------~~~~~~~~~~~~~~~~~-~~~~~l~~~~~l~g~g~g~~ 150 (575)
|+++.++-+.+.. +. .+ ...+.++....|...+. .-...++++.++.|+|...+
T Consensus 175 gsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi 254 (735)
T KOG3626|consen 175 GSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPI 254 (735)
T ss_pred HHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCC
Confidence 9999887432221 10 00 00001111111111222 23446788899999999999
Q ss_pred ccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhhhccc------------------cc-cchhHhHHH
Q 008158 151 RPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQD------------------SV-SWVIGFGIP 211 (575)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~------------------~~-gw~~~f~~~ 211 (575)
++...+|+=|-..+++ -...+++.+....+|.++|..++++... ++ .|...|++.
T Consensus 255 ~tlGisYiDDnvk~~~------SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~ 328 (735)
T KOG3626|consen 255 FTLGISYIDDNVKKKN------SPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLIC 328 (735)
T ss_pred ccCCCccccccccccC------CcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHH
Confidence 9999999999888766 7889999999999999999999887532 11 388888888
Q ss_pred HHHHHHHHHHHHhccceE
Q 008158 212 TVLMIGAIILFLVGKKLY 229 (575)
Q Consensus 212 ~~~~~i~~~~~~~~~~~~ 229 (575)
+.+.++..+.+++..+..
T Consensus 329 g~~~~~~a~p~f~fPk~l 346 (735)
T KOG3626|consen 329 GALLLFSAVPLFFFPKEL 346 (735)
T ss_pred HHHHHHHHHHHHhCcccC
Confidence 777777766666655543
No 161
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.07 E-value=6.3e-09 Score=112.92 Aligned_cols=155 Identities=10% Similarity=0.048 Sum_probs=111.7
Q ss_pred HHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCC
Q 008158 41 MVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDVAKP 120 (575)
Q Consensus 41 ~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (575)
.+++.+++|++..+..+......+...++.+++|+++||+ |||+.++.+.++.+++.+.++.....+
T Consensus 294 ~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-g~r~~~i~~~~~~~v~~~~l~~~~~~~------------ 360 (479)
T PRK10077 294 APEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKF-GRKPLQIIGALGMAIGMFSLGTAFYTQ------------ 360 (479)
T ss_pred HHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHhHHHHHHHHHHHHHHHhcC------------
Confidence 3445567898887777777788888899999999999995 999999999999988888776542100
Q ss_pred CCCccCCCcchhhHHHHHHHHHHHHhccC-CccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhh---
Q 008158 121 PFGQCKSANSMQLGVLVMGLGLLSIGTGG-IRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLV--- 196 (575)
Q Consensus 121 ~~~~~~~~~~~~~~~l~~~~~l~g~g~g~-~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~--- 196 (575)
. .........++.+.+.+. ..|+.+.++.|.+|+++ |+.++++.+...++|..+++.+.+
T Consensus 361 ---------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~~g~~~~~~~~p~~~ 424 (479)
T PRK10077 361 ---------A-PGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAI------RGKALAIAVAAQWIANYFVSWTFPMMD 424 (479)
T ss_pred ---------c-ccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhH------HHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 0 111223333344444433 34677899999999877 999999999998888888865544
Q ss_pred ---hccccccchhHhHHHHHHHHHHHHHHHh
Q 008158 197 ---YIQDSVSWVIGFGIPTVLMIGAIILFLV 224 (575)
Q Consensus 197 ---~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 224 (575)
++.+.++|++.|++.++..+++.++.++
T Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (479)
T PRK10077 425 KNSWLVAHFHNGFSYWIYGCMGVLAALFMWK 455 (479)
T ss_pred hccchhhhccCccHHHHHHHHHHHHHHHHHh
Confidence 4446788998888876665555555443
No 162
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.06 E-value=1.8e-09 Score=110.65 Aligned_cols=186 Identities=13% Similarity=-0.006 Sum_probs=138.4
Q ss_pred cchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHH
Q 008158 16 WKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAI 95 (575)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~ 95 (575)
.+..|++...++...=++.++...++.|++++++.++.+++.+...+.+...+..+.+|+|+||+ |.+|+.+.....++
T Consensus 217 ~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~-Gg~rv~~~~f~~~~ 295 (417)
T COG2223 217 NKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI-GGRRVTLAVFVGMA 295 (417)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhc-cchhHHHHHHHHHH
Confidence 45566666667666666678889999999999999999999999999999999999999999995 99999999888888
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhh
Q 008158 96 LGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINS 175 (575)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 175 (575)
++..+..+..+... . ..+....+...+.+++..|.-......++..++|++ -+.
T Consensus 296 ~~~~~l~~~~~~~~--~-----------------~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~-------~G~ 349 (417)
T COG2223 296 LAAALLSLFLTGFG--H-----------------GGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKE-------TGA 349 (417)
T ss_pred HHHHHHHccccccc--c-----------------CcchHHHHHHHHHHHHHhccCcchheeechHHHHhh-------hhH
Confidence 88888776431000 0 012333333333334444444445666667777753 599
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhcccccc-chhHhHHHHHHHHHHHHHHHhccce
Q 008158 176 FFNWYYTTFTVVILITQTVLVYIQDSVS-WVIGFGIPTVLMIGAIILFLVGKKL 228 (575)
Q Consensus 176 ~~~~~~~~~~ig~~~~~~v~~~l~~~~g-w~~~f~~~~~~~~i~~~~~~~~~~~ 228 (575)
..++.....++|++.-|...+...+..| ++..|++-..+.+++.++.+..+.+
T Consensus 350 v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~r 403 (417)
T COG2223 350 VTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALYAR 403 (417)
T ss_pred HHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999988888877777 8888887777777676665554433
No 163
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.04 E-value=2e-09 Score=115.79 Aligned_cols=176 Identities=15% Similarity=0.036 Sum_probs=117.1
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHH---
Q 008158 21 YILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILG--- 97 (575)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~--- 97 (575)
......++.....+++.+++|.|+++..|++..+.+++...+.++..++.+++|+++||+ |+++....+..+..+.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~ 333 (438)
T TIGR00712 255 YIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FKGNRGATGVFFMTLVTIA 333 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccHHHHHHHHHHHHH
Confidence 333445555566678889999999999999999999999999999999999999999995 7544222333222221
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhh
Q 008158 98 MLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFF 177 (575)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 177 (575)
.+...... ..+.....+..++.|++..+..........|.+|+++ |+++.
T Consensus 334 ~~~~~~~~------------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~ 383 (438)
T TIGR00712 334 VIVYWMNP------------------------AGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKA------AGTAA 383 (438)
T ss_pred HHHHHhcC------------------------CCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhh------eeeeh
Confidence 11111110 0022223333344454432222222345678888877 99999
Q ss_pred HHHHHHHHHH-HHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhccc
Q 008158 178 NWYYTTFTVV-ILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKK 227 (575)
Q Consensus 178 ~~~~~~~~ig-~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~ 227 (575)
++++...++| .+++|.+.|++.+..||...|++.++..++++++.++..+
T Consensus 384 g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 434 (438)
T TIGR00712 384 GFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMI 434 (438)
T ss_pred hhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHh
Confidence 9998888877 4689999999999889999998776666556555554433
No 164
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.04 E-value=4.1e-09 Score=114.59 Aligned_cols=163 Identities=14% Similarity=0.086 Sum_probs=107.0
Q ss_pred HHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchH-------HHHHHHHHHHHHHHHH
Q 008158 29 ERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFK-------TITFASIAAILGMLTV 101 (575)
Q Consensus 29 ~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~-------~~~~~~~l~~~~~~~~ 101 (575)
.....++...+++.|+.+++|++..+++.+.+++.++..++.+++|+++||+ |||+ ......++..++.++.
T Consensus 264 ~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-~~r~~~~~r~~~~~~~~~l~~i~~~~~ 342 (476)
T PLN00028 264 SFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVA-ARRFGMRGRLWALWIVQTLGGVFCIWL 342 (476)
T ss_pred HHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHhcCcchhHHHHHHHHHHHHHHHHHh
Confidence 3334455667789999989999999999999999999999999999999995 8762 2212222222222222
Q ss_pred HHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHH
Q 008158 102 TLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYY 181 (575)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 181 (575)
+... +.....+..++.+++.+...+...++..+..| ++ |+...++.+
T Consensus 343 ~~~~--------------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~------~g~~~g~~~ 389 (476)
T PLN00028 343 GRAN--------------------------SLGAAIVVMILFSIFVQAACGATFGIVPFVSR-RS------LGVISGLTG 389 (476)
T ss_pred cccc--------------------------hHHHHHHHHHHHHHHHHHhhhhhcccCcccCh-hh------chhhhhhhh
Confidence 2111 23334444445555544444445555555544 34 899999988
Q ss_pred HHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhcc
Q 008158 182 TTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGK 226 (575)
Q Consensus 182 ~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~ 226 (575)
.+.++|+.+++.+.+ ..+..+|+.+|++.+++.+++.++.++.+
T Consensus 390 ~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 390 AGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred ccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 888888888876654 22345799999988877777766665543
No 165
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.02 E-value=3e-09 Score=110.38 Aligned_cols=154 Identities=16% Similarity=0.084 Sum_probs=124.8
Q ss_pred hhHHHHHHHHHHHHHhhhhH-HHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHH
Q 008158 18 AMPYILGNETFERLATIGLL-ANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (575)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~-~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~ 96 (575)
..+......++.....++.. ...+.|.++.+|.+..+.+.+.....++..++.++.|++.||+ |||+.+..+..+..+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~ 289 (365)
T TIGR00900 211 LLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYF-KRMALMTGAIFVIGL 289 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chhHHHHHHHHHHHH
Confidence 34444445555555555555 5667777777999999999999999999999999999999995 999999888777777
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhh
Q 008158 97 GMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSF 176 (575)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 176 (575)
+.+...+... +.+.+++..++.|++.+...+...+++.|..|+++ |++.
T Consensus 290 ~~~~~~~~~~-------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~ 338 (365)
T TIGR00900 290 AILVVGLTPP-------------------------NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAEL------LGRV 338 (365)
T ss_pred HHHHHHhhch-------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHH
Confidence 7666665431 25567788889999999999999999999999877 9999
Q ss_pred hHHHHHHHHHHHHHHhhhhhhcccccc
Q 008158 177 FNWYYTTFTVVILITQTVLVYIQDSVS 203 (575)
Q Consensus 177 ~~~~~~~~~ig~~~~~~v~~~l~~~~g 203 (575)
.++++...++|..++|.++|++.+.+|
T Consensus 339 ~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 339 FGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999887543
No 166
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.02 E-value=4.5e-09 Score=112.03 Aligned_cols=161 Identities=10% Similarity=-0.048 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHhh-hhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHH-HHHHHHHHHHHH
Q 008158 21 YILGNETFERLATIGLLANFMVYLLK-EYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKT-ITFASIAAILGM 98 (575)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~l~~yl~~-~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~-~~~~~~l~~~~~ 98 (575)
......++....++++.+++|.|+++ ..|.+..+++.+.....++..++.+++|+++||+ |||+. .....++..++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~-~~r~~~~~~~~~~~~~~~ 324 (412)
T TIGR02332 246 LYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRL-KERKHHTALPYLFAAAGW 324 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhccc-CccHHHHHHHHHHHHHHH
Confidence 34455666677778899999999987 3577888999999999999999999999999995 97774 333333333332
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhH
Q 008158 99 LTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFN 178 (575)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 178 (575)
...... + +....+.+..+.++|.....+.......|.+|+++ |+.+++
T Consensus 325 -~~~~~~--~-----------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~~a~g 372 (412)
T TIGR02332 325 -LLASAT--D-----------------------HNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQA------RAIAIA 372 (412)
T ss_pred -HHHHhc--C-----------------------CHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHH------HHHHHH
Confidence 222111 0 11111222223333433333334444566777766 999999
Q ss_pred HHHHHHHHHHHHHhhhhhhcccccc-chhHhHHHHHH
Q 008158 179 WYYTTFTVVILITQTVLVYIQDSVS-WVIGFGIPTVL 214 (575)
Q Consensus 179 ~~~~~~~ig~~~~~~v~~~l~~~~g-w~~~f~~~~~~ 214 (575)
+.+...++|..++|.+.|.+.+..| |++.|++.++.
T Consensus 373 ~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 373 VINATGNIGSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred HHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 9999999999999999999998774 99998865553
No 167
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.02 E-value=5.4e-09 Score=112.01 Aligned_cols=160 Identities=13% Similarity=0.043 Sum_probs=120.2
Q ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHH
Q 008158 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGM 98 (575)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~ 98 (575)
.+..+...++...+.+......+.|.+..++ +..+.+++.....++..++.++.|+++||+ |||+++..+.++.+++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~ 301 (437)
T TIGR00792 224 LLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKF-GRKILFAGGILLMVLGY 301 (437)
T ss_pred HHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHH
Confidence 3444555566666655544445555555555 566777788888899999999999999995 99999999988888877
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCC-cccccchhhhh
Q 008158 99 LTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATT-DEGVKGINSFF 177 (575)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~-~~~~~~r~~~~ 177 (575)
+...+..+ +...+++..++.|++.+...+...++++|..|.++ +.++++++..+
T Consensus 302 ~~~~~~~~-------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 356 (437)
T TIGR00792 302 LIFFFAGS-------------------------NLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVY 356 (437)
T ss_pred HHHHHcch-------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHH
Confidence 76655321 34556667778899999888999999999887543 22334579999
Q ss_pred HHHHHHHHHHHHHHhhhhhhccccccch
Q 008158 178 NWYYTTFTVVILITQTVLVYIQDSVSWV 205 (575)
Q Consensus 178 ~~~~~~~~ig~~~~~~v~~~l~~~~gw~ 205 (575)
+++++...+|..+++.+.|++.+..||.
T Consensus 357 ~~~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 357 SVRTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999987766663
No 168
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.01 E-value=5.6e-09 Score=110.06 Aligned_cols=165 Identities=10% Similarity=0.037 Sum_probs=113.2
Q ss_pred HHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHH
Q 008158 24 GNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTL 103 (575)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~ 103 (575)
+..++.....+...+++++|+.+.+|+++.+.+.+.+...++..++.++.|++.||+ |+|+.+..+..+..++.+....
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~-~~~~~~~~~~~~~~i~~~~~~~ 284 (382)
T PRK10091 206 AATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRY-SPLRIAAVTDFIIVLALLMLFF 284 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheecccc-CchhHHHHHHHHHHHHHHHHHH
Confidence 333444444455566778899888999999999999999999999999999999995 9999998888888777765543
Q ss_pred HhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCC-CCCCcccccchhhhhHHHHH
Q 008158 104 TAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQF-DATTDEGVKGINSFFNWYYT 182 (575)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~~~ 182 (575)
..+ +.+...+..++.++|..+..+.......+.. +++. ++.. ..+.
T Consensus 285 ~~~-------------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~--~~~~ 331 (382)
T PRK10091 285 FGG-------------------------MKTASLIFAFICCAGLFALSAPLQILLLQNAKGGEL------LGAA--GGQI 331 (382)
T ss_pred HHh-------------------------hHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchH------HHHH--HHHH
Confidence 221 2233444445556655444443333333333 3222 3433 3356
Q ss_pred HHHHHHHHHhhhhhhcccc-ccchhHhHHHHHHHHHHHHHH
Q 008158 183 TFTVVILITQTVLVYIQDS-VSWVIGFGIPTVLMIGAIILF 222 (575)
Q Consensus 183 ~~~ig~~~~~~v~~~l~~~-~gw~~~f~~~~~~~~i~~~~~ 222 (575)
..++|..+||.++|++.+. .+|+..+.+.++..++.+...
T Consensus 332 ~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (382)
T PRK10091 332 AFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSL 372 (382)
T ss_pred HHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHH
Confidence 6789999999999998884 689999988766555444433
No 169
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.01 E-value=1.8e-08 Score=107.01 Aligned_cols=162 Identities=11% Similarity=-0.055 Sum_probs=120.4
Q ss_pred HHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhc
Q 008158 28 FERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWL 107 (575)
Q Consensus 28 ~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~ 107 (575)
+.....+...+..+.|+.+++|++..+.++......++..++.++.|+++||+ |||+.+..+.++..++.+...+....
T Consensus 226 ~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~g~~~~~~~~~~ 304 (406)
T PRK15402 226 LVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR-PLRSLIRMGLWPMVAGLLLAALATVI 304 (406)
T ss_pred HHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 33344445556678888889999999999888888888889999999999995 99999998888888877777654311
Q ss_pred CCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHH
Q 008158 108 PQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVV 187 (575)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig 187 (575)
+ ..+...++++.++.|+|.+...+......... ++++ |++..+.++....+|
T Consensus 305 ~---------------------~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~------~g~~~~~~~~~~~~~ 356 (406)
T PRK15402 305 S---------------------SHAYLWLTAGLSLYAFGIGLANAGLYRLTLFS-SDVS------KGTVSAAMGMLSMLI 356 (406)
T ss_pred c---------------------cccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh-cccc------ccHHHHHHHHHHHHH
Confidence 1 11345567788889999888777655544333 3344 899999999999999
Q ss_pred HHHHhhhhhhccccccchhHhHHHHHHHHHH
Q 008158 188 ILITQTVLVYIQDSVSWVIGFGIPTVLMIGA 218 (575)
Q Consensus 188 ~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~ 218 (575)
..+|+.+.+++.+..++....+..++..++.
T Consensus 357 ~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ 387 (406)
T PRK15402 357 FTVGIELSKHAYLGGGNGLFNLFNLANGLLW 387 (406)
T ss_pred HHHHHHHHHhcccCCchHHHHHHHHHHHHHH
Confidence 9999999999988777665544444443333
No 170
>PRK10504 putative transporter; Provisional
Probab=99.00 E-value=6.7e-09 Score=112.59 Aligned_cols=156 Identities=11% Similarity=-0.046 Sum_probs=119.6
Q ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHH
Q 008158 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGM 98 (575)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~ 98 (575)
....+...++....+.......+.|++..+|.++.+.+++.....++..++.++.|+++||+ |||+++..+..+..++.
T Consensus 263 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~ 341 (471)
T PRK10504 263 FSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF-GYRRVLVATTLGLALVS 341 (471)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHH
Confidence 44444555565566544555677777778999999999999888888888889999999995 99999998888877776
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhH
Q 008158 99 LTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFN 178 (575)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 178 (575)
....+... ......+.+..++.|++.+...+....+..+..|+++ ++..++
T Consensus 342 ~~~~~~~~-----------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~ 392 (471)
T PRK10504 342 LLFMLVAL-----------------------LGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNL------ASSGNS 392 (471)
T ss_pred HHHHhccc-----------------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHh------ccchHH
Confidence 66554321 0022334445667788888888888888889999877 999999
Q ss_pred HHHHHHHHHHHHHhhhhhhccccccc
Q 008158 179 WYYTTFTVVILITQTVLVYIQDSVSW 204 (575)
Q Consensus 179 ~~~~~~~ig~~~~~~v~~~l~~~~gw 204 (575)
+.+....+|..+|+.++|.+.+..|+
T Consensus 393 ~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 393 LLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999887665544
No 171
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.00 E-value=9.8e-09 Score=108.26 Aligned_cols=164 Identities=7% Similarity=-0.016 Sum_probs=125.1
Q ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHH
Q 008158 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGM 98 (575)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~ 98 (575)
.+..+...++......+....++.|++ +.|.+..+.+.+.+...++..+..++.|++.||+ |+|+.+..+.++..++.
T Consensus 207 ~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~l~~~~~~~~~~~ 284 (382)
T PRK11128 207 VWRFLLCVSLLQGSHAAYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRW-SARDLLLLSAICGVVRW 284 (382)
T ss_pred HHHHHHHHHHHHHHhHhHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHH
Confidence 343444455555666667788888985 5899999999999988888888999999999995 99999999988888877
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhH
Q 008158 99 LTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFN 178 (575)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 178 (575)
+..+.++ +.+.+++..++.|++.+...+....+..+. ++++ +++..+
T Consensus 285 ~~~~~~~--------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~------~~~~~~ 331 (382)
T PRK11128 285 GLMGSTT--------------------------ALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSE------VIRLQA 331 (382)
T ss_pred HHHHhhh--------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhh------hHHHHH
Confidence 7666544 566678888999999888888877777765 4434 677788
Q ss_pred HHH-HHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHH
Q 008158 179 WYY-TTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGA 218 (575)
Q Consensus 179 ~~~-~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~ 218 (575)
.+. ....+|..+||.++|++.|..|+. .|+..+++.+++
T Consensus 332 ~~~~~~~~~g~~ig~~i~G~l~~~~g~~-~~~~~~~~~~~~ 371 (382)
T PRK11128 332 LYSALAMGGSIAIMTVLSGFLYQHLGAG-VFWVMALVALPA 371 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHH
Confidence 776 445778899999999999988874 555555444433
No 172
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.00 E-value=4.9e-09 Score=107.26 Aligned_cols=146 Identities=14% Similarity=0.117 Sum_probs=115.4
Q ss_pred hhhHHHHHHHHhhh--hCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 008158 34 IGLLANFMVYLLKE--YHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLH 111 (575)
Q Consensus 34 ~~~~~~l~~yl~~~--l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~ 111 (575)
-++..+++.|+.+. +|+++++.+...+.+..+..++.++++++.|| +|+||++.++..+.+++.++....+
T Consensus 157 ~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r-~g~~~~l~~~~~l~~~~~~l~~~~~------ 229 (310)
T TIGR01272 157 VSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPM-ISQGRYLAFNAFLAVLLSIGAALTH------ 229 (310)
T ss_pred HHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHHcC------
Confidence 45677899999854 79999999999999999999999999999999 5999998888887777765544422
Q ss_pred CCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHH
Q 008158 112 PPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILIT 191 (575)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~ 191 (575)
.. ....+.++.|++.+..+|...+...+.+|++. +++.++. ....+|+.++
T Consensus 230 --------------------~~-~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~-------~~asai~-~~~~~Gg~i~ 280 (310)
T TIGR01272 230 --------------------GY-VAMWFVLALGLFNSIMFPTIFSLALNALGRHT-------SQGSGIL-CLAIVGGAIV 280 (310)
T ss_pred --------------------CH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-------hhhHHHH-HHHHhcchHH
Confidence 11 12335557899999999999999999888643 3444444 5667999999
Q ss_pred hhhhhhccccccchhHhHHHHHHH
Q 008158 192 QTVLVYIQDSVSWVIGFGIPTVLM 215 (575)
Q Consensus 192 ~~v~~~l~~~~gw~~~f~~~~~~~ 215 (575)
|.+.|++.|..|.+..|++..++.
T Consensus 281 P~l~G~lad~~g~~~a~~v~~~~~ 304 (310)
T TIGR01272 281 PLLQGSLADCLGIQLAFALPVPCY 304 (310)
T ss_pred HHHHHHHHHhccchHHHHHHHHHH
Confidence 999999999889998988665543
No 173
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.98 E-value=1.1e-08 Score=108.08 Aligned_cols=174 Identities=16% Similarity=0.015 Sum_probs=122.0
Q ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHH-HHHHHhhhhHHHhhhcccchHHHHHHHHHHHHH
Q 008158 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGG-VTNFAPLLGAFISDTYIGRFKTITFASIAAILG 97 (575)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~-~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~ 97 (575)
++..+...++...+.....++.++|+.+ +|++.++.+.+...... ...++.+++|++.||+ |+|+.+..+..+..+.
T Consensus 210 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~~ 287 (390)
T TIGR02718 210 AWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRA-GLWRTFILGVGLAGSL 287 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHH
Confidence 3444445555556666677788888875 79999999999888765 5667789999999995 9999998877665333
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCC-CCcccccchhhh
Q 008158 98 MLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDA-TTDEGVKGINSF 176 (575)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~-~~~~~~~~r~~~ 176 (575)
.+........+. ......+.....+.+++.+...+...+...+..++ +. +++.
T Consensus 288 ~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~g~~ 341 (390)
T TIGR02718 288 ALLWFAQAAFWL--------------------APGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQ------AGTD 341 (390)
T ss_pred HHHHHHHHHccc--------------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc------hHHH
Confidence 332221111000 00222333444455666666666677777777665 44 8999
Q ss_pred hHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHH
Q 008158 177 FNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAII 220 (575)
Q Consensus 177 ~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~ 220 (575)
++..+...++|..+||.++|++.+..||+..|++.+++.+++++
T Consensus 342 ~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 342 VTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988999999877766555544
No 174
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.98 E-value=9.4e-09 Score=109.79 Aligned_cols=145 Identities=12% Similarity=0.024 Sum_probs=105.9
Q ss_pred hhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 008158 34 IGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPP 113 (575)
Q Consensus 34 ~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 113 (575)
+.+..+++.|+++ .|.+..+.+.+.+...++..++.++.|+++||+ |||+++..+.++..+..+.......
T Consensus 248 ~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~~~------- 318 (426)
T PRK12307 248 WPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRI-GLKKTFSIGLLMSFLFIFPLFRIPQ------- 318 (426)
T ss_pred HHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHcc-------
Confidence 3456678888875 699999999999999999999999999999995 9999998888776655544433210
Q ss_pred CCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhh
Q 008158 114 KCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQT 193 (575)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~ 193 (575)
.....+....+..+.+..+..+..+.++.|.+|++. |++++++.+...++|..++|.
T Consensus 319 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~~~~~gp~ 375 (426)
T PRK12307 319 -----------------DNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEV------RGLGTGLIYNLAATSGTFNSM 375 (426)
T ss_pred -----------------ccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHH------HhhhhhHHHHHHhHHHHHHHH
Confidence 011111122222223333344556778899999877 999999999999999999999
Q ss_pred hhhhccccccchhHhHH
Q 008158 194 VLVYIQDSVSWVIGFGI 210 (575)
Q Consensus 194 v~~~l~~~~gw~~~f~~ 210 (575)
+.|++.+..|+....++
T Consensus 376 ~~g~l~~~~g~~~~~~~ 392 (426)
T PRK12307 376 AATWLGITMGLGAALTF 392 (426)
T ss_pred HHHHHHHcccHHHHHHH
Confidence 99999988887654433
No 175
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.98 E-value=9.1e-09 Score=99.45 Aligned_cols=167 Identities=14% Similarity=0.099 Sum_probs=128.2
Q ss_pred CCCcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHH-
Q 008158 13 PGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFAS- 91 (575)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~- 91 (575)
+...+..+++++.+.+--++++=..+.-+.+.++.+|+|..+++.+.+.........+++.|.++||+ ||+...+.+.
T Consensus 260 ~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~-G~n~~wv~~a~ 338 (459)
T KOG4686|consen 260 NTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY-GFNLWWVASAC 338 (459)
T ss_pred cccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh-cceehhHHHHH
Confidence 34456667777666666566555666678899999999999999999999999999999999999997 9997655544
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCccccc
Q 008158 92 IAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVK 171 (575)
Q Consensus 92 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 171 (575)
+++.++..+..++.. .=+++..+.|+..........+.++...|+++
T Consensus 339 ~~tl~~H~~l~Ft~l----------------------------sPy~~m~~lGLsysllAcslWP~va~~vpE~q----- 385 (459)
T KOG4686|consen 339 ILTLLGHSGLFFTFL----------------------------SPYTSMTFLGLSYSLLACSLWPCVASLVPEEQ----- 385 (459)
T ss_pred HHHHHHhhhHHhhhc----------------------------cHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHH-----
Confidence 456667777776432 12556666777776666666777788888877
Q ss_pred chhhhhHHHHHHHHHHHHHHhhhhhhcccccc---chhHhHHHHHH
Q 008158 172 GINSFFNWYYTTFTVVILITQTVLVYIQDSVS---WVIGFGIPTVL 214 (575)
Q Consensus 172 ~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~g---w~~~f~~~~~~ 214 (575)
.|++++..+...|+|..+.|++.|.+.+.-| |--.|++....
T Consensus 386 -LGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~ 430 (459)
T KOG4686|consen 386 -LGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGL 430 (459)
T ss_pred -hcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHH
Confidence 9999999999999999999999999987654 55566554443
No 176
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.97 E-value=5.1e-09 Score=109.10 Aligned_cols=160 Identities=15% Similarity=0.099 Sum_probs=114.6
Q ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHH--HHHH
Q 008158 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASI--AAIL 96 (575)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~--l~~~ 96 (575)
.+.+....++.....+++..+++.|+.+.+|++..+.+.+...+.++..++.++.|+++||..+||+....... +..+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~ 297 (379)
T TIGR00881 218 LWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIV 297 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHH
Confidence 34444555566666677788899999999999999999999999999999999999999984233433222111 1112
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhh
Q 008158 97 GMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSF 176 (575)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 176 (575)
+........ ..+.....+..++.|+...+..+....+..|.+|+++ |+++
T Consensus 298 ~~~~~~~~~------------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~ 347 (379)
T TIGR00881 298 SLLVYWLNP------------------------AANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKA------AGTA 347 (379)
T ss_pred HHHHHhcCc------------------------chhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcch------hHHH
Confidence 211111100 0123344555566676655656666778899999877 9999
Q ss_pred hHHHHHHHHHHHHHHhhhhhhccccccchhHh
Q 008158 177 FNWYYTTFTVVILITQTVLVYIQDSVSWVIGF 208 (575)
Q Consensus 177 ~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f 208 (575)
.++++...++|..++|.+.|++.+.+||++.|
T Consensus 348 ~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 348 AGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 99999999999999999999999999998765
No 177
>TIGR00895 2A0115 benzoate transport.
Probab=98.94 E-value=8e-09 Score=108.52 Aligned_cols=145 Identities=10% Similarity=0.010 Sum_probs=111.3
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHH
Q 008158 20 PYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGML 99 (575)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~ 99 (575)
....+..++....++.+..+++ ++.+++|.+..+.+.+.....++..++.+++|+++||+ |||+.+.......+.+.+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~ 330 (398)
T TIGR00895 253 VLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRL-GPRVTALLLLLGAVFAVL 330 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHHHHHHHHH
Confidence 3334444555556666666666 77778999999999999999999999999999999995 999555444333333322
Q ss_pred HHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHH
Q 008158 100 TVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNW 179 (575)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 179 (575)
...... +...+++..++.|++.++..+...++..|.+|+++ |++.+++
T Consensus 331 ~~~~~~--------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~ 378 (398)
T TIGR00895 331 VGSTLF--------------------------SPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAI------RATGVGW 378 (398)
T ss_pred HHHHhh--------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHH------HHHHHHH
Confidence 222111 34456677788899999999999999999999877 9999999
Q ss_pred HHHHHHHHHHHHhhhhhhc
Q 008158 180 YYTTFTVVILITQTVLVYI 198 (575)
Q Consensus 180 ~~~~~~ig~~~~~~v~~~l 198 (575)
++....+|..+||.++|++
T Consensus 379 ~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 379 AIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHhHHhc
Confidence 9999999999999999875
No 178
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.93 E-value=1.4e-08 Score=107.46 Aligned_cols=154 Identities=8% Similarity=0.085 Sum_probs=116.4
Q ss_pred hhHHHHHHHHhhhh---CCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 008158 35 GLLANFMVYLLKEY---HMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLH 111 (575)
Q Consensus 35 ~~~~~l~~yl~~~l---~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~ 111 (575)
......+.|+.+.+ +.+....+.+.++..+...++.++.|++.||+ |||+.+.++.++..++......+.
T Consensus 233 ~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~-g~~~~l~~~~~l~~l~~~~~~~~~------ 305 (396)
T TIGR00882 233 VFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI-GAKNALLIAGTIMSVRIIGSSFAT------ 305 (396)
T ss_pred HHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHHHHHHHHHHHhcC------
Confidence 34456778887765 45566778888888888888999999999995 999999999888888777666543
Q ss_pred CCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHH-HHHHHHHHHHH
Q 008158 112 PPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNW-YYTTFTVVILI 190 (575)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~ig~~~ 190 (575)
+.+.+++.+++.|++.+........+..+..+++. ++...+. ++....+|..+
T Consensus 306 --------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~at~~~~~~~~~~~lg~~~ 359 (396)
T TIGR00882 306 --------------------TALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRL------SATIYLIGFQFAKQLAMIF 359 (396)
T ss_pred --------------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcce------EEEeehHHHHHHHHHHHHH
Confidence 44556777888888876655555556666666544 5665655 56778999999
Q ss_pred HhhhhhhccccccchhHhHHHHHHHHHHHHH
Q 008158 191 TQTVLVYIQDSVSWVIGFGIPTVLMIGAIIL 221 (575)
Q Consensus 191 ~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~ 221 (575)
++.++|++.+..||+..|.+.+++..+..++
T Consensus 360 ~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 360 LSTLAGNMYDSIGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred HHHhHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 9999999999899999999877665554443
No 179
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.92 E-value=1.4e-08 Score=111.17 Aligned_cols=165 Identities=15% Similarity=0.042 Sum_probs=106.5
Q ss_pred HHHHHHhhhhHHHHHHHHhhhhCCChhhHHH------------HHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHH
Q 008158 27 TFERLATIGLLANFMVYLLKEYHMNQTSAAN------------ILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAA 94 (575)
Q Consensus 27 ~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~------------i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~ 94 (575)
++..+.+|++..+.|.+++ ++|++..+.+. ...+..++..++.+++++++||+ |||++++.+..+.
T Consensus 298 ~~~~~~~y~~~~~~p~i~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~-gRR~~l~~~~~~~ 375 (502)
T TIGR00887 298 FLLDIAFYGVNLNQKVILS-AIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDII-GRKPIQLMGFFIL 375 (502)
T ss_pred HHHHHHHHccccccHHHHH-HHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cchhHHHHHHHHH
Confidence 3344567777777777774 67886543221 12233345556778899999995 9999998888877
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchh
Q 008158 95 ILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGIN 174 (575)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 174 (575)
.++.++.++..... . ....+....+...++..+..+....+.+|.+|++. |+
T Consensus 376 ~~~~~~l~~~~~~~---------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~------R~ 427 (502)
T TIGR00887 376 TVLFFVLGFAYNHL---------------------S-THGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRY------RS 427 (502)
T ss_pred HHHHHHHHHHHHhc---------------------c-hhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhH------HH
Confidence 77766665532100 0 11111111122222233344566777899999987 99
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhhcccc----------ccchhHhHHHHHHHHHHHHH
Q 008158 175 SFFNWYYTTFTVVILITQTVLVYIQDS----------VSWVIGFGIPTVLMIGAIIL 221 (575)
Q Consensus 175 ~~~~~~~~~~~ig~~~~~~v~~~l~~~----------~gw~~~f~~~~~~~~i~~~~ 221 (575)
++.++.+....+|++++|.+.+++.+. .++...|++.+++.+++.+.
T Consensus 428 ~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~ 484 (502)
T TIGR00887 428 TAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILF 484 (502)
T ss_pred HHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988763 34455666665555554443
No 180
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.92 E-value=3.9e-08 Score=106.53 Aligned_cols=177 Identities=12% Similarity=0.005 Sum_probs=120.1
Q ss_pred chhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHH--------H
Q 008158 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTI--------T 88 (575)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~--------~ 88 (575)
+.++.+....++....++...+++|.|+.+.+|++..+.++..++..++..++.+++|+++||+ ++|+.. .
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~-~~~~~~~~~~~~~~~ 339 (465)
T TIGR00894 261 LPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFL-KSSKTLSLTAARKIF 339 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCcHHHHHHHH
Confidence 3455666777788888888899999999999999999999999999999999999999999995 654321 1
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcc
Q 008158 89 FASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDE 168 (575)
Q Consensus 89 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~ 168 (575)
.+..+...+......... . .+....++...+.+.+.++..+.......|..|+ .
T Consensus 340 ~~~~~~~~~~~~~~~~~~-~----------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~-- 393 (465)
T TIGR00894 340 NGIGGLGPGIFAYALPYL-S----------------------AAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-F-- 393 (465)
T ss_pred HHHHHHHHHHHHHHHHHc-C----------------------CchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-H--
Confidence 111111111111111110 0 0222333444444555555555544445565553 3
Q ss_pred cccchhhhhHHHHHHHHHHHHHHhhhhhhccccc---cchhHhHHHHHHHHHHHHHHHh
Q 008158 169 GVKGINSFFNWYYTTFTVVILITQTVLVYIQDSV---SWVIGFGIPTVLMIGAIILFLV 224 (575)
Q Consensus 169 ~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~---gw~~~f~~~~~~~~i~~~~~~~ 224 (575)
++...++.+...++|+.++|.+.|++.+.. +|+.+|.+.++..+++.++...
T Consensus 394 ----~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 394 ----LGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeee
Confidence 899999999999999999999999987642 4888888877776666655443
No 181
>PRK10133 L-fucose transporter; Provisional
Probab=98.91 E-value=1.9e-08 Score=108.07 Aligned_cols=164 Identities=15% Similarity=0.067 Sum_probs=122.4
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHH-hhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHH
Q 008158 22 ILGNETFERLATIGLLANFMVYL-LKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLT 100 (575)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~l~~yl-~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~ 100 (575)
.+...++.....++...+++.|+ ++.+|+++.+.+.....+.++..++.+++|++.||+ |||+++..+..+..++..+
T Consensus 263 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~-g~~~~l~~~~~~~~~~~~~ 341 (438)
T PRK10133 263 AVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRF-APHKVLAAYALIAMALCLI 341 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHH
Confidence 33344444455566677888896 567899999999999999999999999999999995 9999998887777666555
Q ss_pred HHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHH
Q 008158 101 VTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWY 180 (575)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 180 (575)
..+.. +. ..+....+.|+|.+...|...+...+.+|++. +.+.++.
T Consensus 342 ~~~~~--------------------------~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~-------~~as~l~ 387 (438)
T PRK10133 342 SAFAG--------------------------GH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQDT-------KYGSSFI 387 (438)
T ss_pred HHHcC--------------------------Ch-HHHHHHHHHHHHHHHHHHHHHHHHHcccchhh-------ccchhHH
Confidence 54432 11 12455677899999999999999999987633 3444444
Q ss_pred HHHHHHHHHHHhhhhhhcccccc-chhHhHHHHHHHHHHHHH
Q 008158 181 YTTFTVVILITQTVLVYIQDSVS-WVIGFGIPTVLMIGAIIL 221 (575)
Q Consensus 181 ~~~~~ig~~~~~~v~~~l~~~~g-w~~~f~~~~~~~~i~~~~ 221 (575)
.. ..+|+.++|.+.|++.+..| -+..|+++.++.+..+..
T Consensus 388 ~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~~ 428 (438)
T PRK10133 388 VM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIF 428 (438)
T ss_pred hH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 33 34678888889999988887 788888776655544443
No 182
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.91 E-value=1.9e-08 Score=109.78 Aligned_cols=168 Identities=12% Similarity=0.063 Sum_probs=140.0
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHH
Q 008158 23 LGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVT 102 (575)
Q Consensus 23 ~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~ 102 (575)
+...++..+....+...+|.+.++.+|.+....|++.+.+++|..++.++.+++.+| +++++.+..+.+++.++.+..+
T Consensus 224 l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~-~~~~~lv~~~~~~~a~~~~~la 302 (524)
T PF05977_consen 224 LLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRR-LSSRRLVLLASLLFALALLLLA 302 (524)
T ss_pred HHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCcchhhHHHHHHHHHHHHHHh
Confidence 333344444444566678888899999999999999999999999999999999999 4999999889888888888888
Q ss_pred HHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHH
Q 008158 103 LTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYT 182 (575)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 182 (575)
++. +.+..++..++.|++.........+.+-+..|++. ||+.+++++.
T Consensus 303 l~~--------------------------~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~------~GRv~si~~~ 350 (524)
T PF05977_consen 303 LSP--------------------------SFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWV------RGRVFSIYQM 350 (524)
T ss_pred cch--------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HhHHHHHHHH
Confidence 765 56667778888899888888888888888899887 9999999999
Q ss_pred HHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHH
Q 008158 183 TFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFL 223 (575)
Q Consensus 183 ~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~ 223 (575)
....+..+|..+.|++.+.+|-+..+.+.++..+++.++.+
T Consensus 351 ~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 351 VFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999898877766555555443
No 183
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.91 E-value=1.1e-08 Score=104.86 Aligned_cols=172 Identities=14% Similarity=0.099 Sum_probs=138.9
Q ss_pred hhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHH
Q 008158 18 AMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILG 97 (575)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~ 97 (575)
...+.+...++-+=+.-++.+.-..|...++|++..+..++.....+...++++++|+|.|| +|.|+++..++++..+.
T Consensus 253 ~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~r-fg~k~vl~~~lvi~~~~ 331 (438)
T COG2270 253 NLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDER-FGSKPVLMIGLVILSIA 331 (438)
T ss_pred chHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCceeehHHHHHHHHH
Confidence 44444555555555556677788899999999999999999999999999999999999999 59999999999998887
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhh
Q 008158 98 MLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFF 177 (575)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 177 (575)
.+..-+.. ....+.+.-.+.|...|+.++.+-++.++..|+++ -++++
T Consensus 332 ~~~~~~~~--------------------------~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k------~~~fF 379 (438)
T COG2270 332 ALYLIFLE--------------------------GELDFWILGLLVGTSLGGAQASSRSYLARLVPKGK------EGRFF 379 (438)
T ss_pred HHHHHHcc--------------------------ccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCcc------cccee
Confidence 77766643 22335666678899999999999999999999988 79999
Q ss_pred HHHHHHHHHHHHHHhhhhhhcccccc-chhHhHHHHHHHHHHHHHH
Q 008158 178 NWYYTTFTVVILITQTVLVYIQDSVS-WVIGFGIPTVLMIGAIILF 222 (575)
Q Consensus 178 ~~~~~~~~ig~~~~~~v~~~l~~~~g-w~~~f~~~~~~~~i~~~~~ 222 (575)
++|......++.+||.+.+.+.+..| -|..+..-+++..+++++.
T Consensus 380 glyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L 425 (438)
T COG2270 380 GLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLL 425 (438)
T ss_pred ehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhE
Confidence 99999999999999999988876543 5666665555555555543
No 184
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.90 E-value=6.2e-08 Score=102.70 Aligned_cols=165 Identities=7% Similarity=-0.041 Sum_probs=118.3
Q ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHH
Q 008158 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGM 98 (575)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~ 98 (575)
++..++..++.....++..+++++++.+++|++..+.+.+...+.++..++.++.|++.||. +| +.+..+..+..+..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~-~~-~~l~~~~~~~~~~~ 295 (394)
T PRK10213 218 VMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS-VK-LALAGAPLVLAVSA 295 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc-ch-hHHHHHHHHHHHHH
Confidence 33333444444455566667776666678899999999999999999999999999999994 54 44444444433333
Q ss_pred HHH-HHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhh
Q 008158 99 LTV-TLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFF 177 (575)
Q Consensus 99 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 177 (575)
+.. ...+ +.+.+.+..++.|++.+...+..++++.+..|+ + +++..
T Consensus 296 ~~l~~~~~--------------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~-~------~~~~~ 342 (394)
T PRK10213 296 LVLTLWGS--------------------------DKIVATGVAIIWGLTFALVPVGWSTWITRSLAD-Q------AEKAG 342 (394)
T ss_pred HHHHHHhh--------------------------hHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCcc-c------HHHHH
Confidence 333 3322 345566777888999999888888888888874 3 45666
Q ss_pred HHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHH
Q 008158 178 NWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGA 218 (575)
Q Consensus 178 ~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~ 218 (575)
+.++...++|..+|+.++|++.+..|++..++..+...++.
T Consensus 343 ~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~ 383 (394)
T PRK10213 343 SIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLT 383 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHH
Confidence 77777789999999999999999899988888766544433
No 185
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.89 E-value=1e-08 Score=111.45 Aligned_cols=156 Identities=12% Similarity=0.025 Sum_probs=125.6
Q ss_pred chhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHH
Q 008158 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (575)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~ 96 (575)
|.+.......++....+++....++.|+++.+|.+..+.+++.....++..++.+++|++.||+ |||+.+..+..+..+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~g~~~~~~ 333 (485)
T TIGR00711 255 RNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKI-DPRKLVTIGLILYAV 333 (485)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcHHHHHHHHHHHHH
Confidence 3344445566666677788888899999999999999999999999999999999999999995 999999999888888
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhh
Q 008158 97 GMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSF 176 (575)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 176 (575)
+..+..+... + ..+.+.+....++.|+|.+...+.......+..|+++ |+.+
T Consensus 334 ~~~~~~~~~~-~---------------------~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~------~g~~ 385 (485)
T TIGR00711 334 GFYWRAFTFT-P---------------------DTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHK------IARG 385 (485)
T ss_pred HHHHHhccCC-C---------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HhHH
Confidence 8777663211 0 1134455666778899998887777777778888776 9999
Q ss_pred hHHHHHHHHHHHHHHhhhhhhcccc
Q 008158 177 FNWYYTTFTVVILITQTVLVYIQDS 201 (575)
Q Consensus 177 ~~~~~~~~~ig~~~~~~v~~~l~~~ 201 (575)
.++++...++|..+|+.+.+.+.+.
T Consensus 386 ~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 386 SSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998887654
No 186
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.89 E-value=2e-08 Score=104.56 Aligned_cols=151 Identities=9% Similarity=0.018 Sum_probs=113.5
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHH
Q 008158 20 PYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGML 99 (575)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~ 99 (575)
+......++....+++...+++.|+++ .|++..+.+.+.+...++..++.++.|+++||+-+||+.+..+.++..++.+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 278 (355)
T TIGR00896 200 WQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLC 278 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHH
Confidence 333344445556667778889999875 7999999999999999999999999999999941466677777777777776
Q ss_pred HHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHH
Q 008158 100 TVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNW 179 (575)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 179 (575)
.+.+..+ +.. ....++.|++.+...+...+...+..++++ +++...++
T Consensus 279 ~~~~~~~-------------------------~~~--~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~-----~~g~~~~~ 326 (355)
T TIGR00896 279 GLLFAPM-------------------------HGL--WAWALVLGLGQGGAFPLALTLIGLRSRQAA-----QAAALSAM 326 (355)
T ss_pred HHHHhhh-------------------------hHH--HHHHHHHHHhhhhHhHHHHHHHHHhccCHH-----HHHHHHHH
Confidence 6665431 111 123467899999988887777776655432 37888888
Q ss_pred HHHHHHHHHHHHhhhhhhcccccc
Q 008158 180 YYTTFTVVILITQTVLVYIQDSVS 203 (575)
Q Consensus 180 ~~~~~~ig~~~~~~v~~~l~~~~g 203 (575)
.+...++|..++|.+.|++.+..|
T Consensus 327 ~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 327 AQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 888888999999999999988765
No 187
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.88 E-value=7.1e-08 Score=101.14 Aligned_cols=155 Identities=10% Similarity=0.116 Sum_probs=112.6
Q ss_pred HHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHH
Q 008158 25 NETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLT 104 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~ 104 (575)
...+.....+......+.|+++++|.++.+.+.+.....++..++.++.|++.||+ |||+.+..+..+..++.++....
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 292 (385)
T TIGR00710 214 IYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKW-GAKSLLRMGLILFAVSAVLLEIT 292 (385)
T ss_pred HHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344445566667778888889999999999999999999999999999999995 99999988888877777666554
Q ss_pred hhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHH
Q 008158 105 AWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTF 184 (575)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 184 (575)
...+ ......++...++.|+|.+...+.......|..| ++ |++..++++...
T Consensus 293 ~~~~---------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~------~g~~~~~~~~~~ 344 (385)
T TIGR00710 293 AILG---------------------LGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HV------AGTASALFGTLR 344 (385)
T ss_pred HHhc---------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-cc------chHHHHHHHHHH
Confidence 3100 0123345555677889989888888888888876 34 788999888776
Q ss_pred HH-HHHHHhhhhhhccccccchhHhH
Q 008158 185 TV-VILITQTVLVYIQDSVSWVIGFG 209 (575)
Q Consensus 185 ~i-g~~~~~~v~~~l~~~~gw~~~f~ 209 (575)
.. |++.++. .+.+.+..+|...+.
T Consensus 345 ~~~g~i~~~~-~~~~~~~~~~~~~~~ 369 (385)
T TIGR00710 345 LVLGAIVGYL-VSLIHGNTAWPMSLS 369 (385)
T ss_pred HHHHHHHHHH-HHhccccChHHHHHH
Confidence 54 5555554 445555555554444
No 188
>PRK10054 putative transporter; Provisional
Probab=98.88 E-value=1.7e-08 Score=107.07 Aligned_cols=172 Identities=11% Similarity=0.050 Sum_probs=123.9
Q ss_pred hhHHHHHHHHHHHHHhhhhHHHHHHHHhh--hhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHH
Q 008158 18 AMPYILGNETFERLATIGLLANFMVYLLK--EYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAI 95 (575)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~--~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~ 95 (575)
..+......++..+........++.|+.. +.+.+....+.+.....+......++.|++.||+ ++|+.+..+..+..
T Consensus 207 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~l~~~~~~~~ 285 (395)
T PRK10054 207 ALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAA-NIRPLMTAGTLCFV 285 (395)
T ss_pred eehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccC-CchhHHHHHHHHHH
Confidence 33444444455444444444566666653 3455666677777777777777778889999995 99999998888888
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhh
Q 008158 96 LGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINS 175 (575)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 175 (575)
++.....++.+ +.+.+.+...+.++|.+...|....++.+..|++. |++
T Consensus 286 ~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~------~~~ 334 (395)
T PRK10054 286 IGLVGFIFSGN-------------------------SLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGM------KAS 334 (395)
T ss_pred HHHHHHHHcch-------------------------HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCccc------cee
Confidence 88776665321 34456677888999998888888888999998876 788
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHH
Q 008158 176 FFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILF 222 (575)
Q Consensus 176 ~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~ 222 (575)
.++... ...+|..+||.++|++.+..|....|++.+.+..++.++.
T Consensus 335 ~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~ 380 (395)
T PRK10054 335 YFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLM 380 (395)
T ss_pred hHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHH
Confidence 887654 5668999999999999999988888876555544444433
No 189
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.88 E-value=5.8e-08 Score=103.08 Aligned_cols=154 Identities=13% Similarity=0.190 Sum_probs=106.9
Q ss_pred HHHHHHHhhhhCCChhhHHHHHHHHH-HHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 008158 38 ANFMVYLLKEYHMNQTSAANILNIWG-GVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCD 116 (575)
Q Consensus 38 ~~l~~yl~~~l~~~~~~~~~i~~~~~-~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 116 (575)
...++++.+++|++.++.+++..... ++..++.+++|++.||+ |||+.+..+.++..+..+........+
T Consensus 230 ~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~-g~~~~l~~~~~~~~l~~l~~~~~~~~~-------- 300 (402)
T PRK11902 230 SLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL-GLYRSLMLFGVLQAVSNLGYWVLAVTP-------- 300 (402)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHhcC--------
Confidence 44556778889999999999887655 45788899999999995 999988777776665544432211100
Q ss_pred CCCCCCCccCCCcchhhHHHHHHH----HHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHh
Q 008158 117 VAKPPFGQCKSANSMQLGVLVMGL----GLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQ 192 (575)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~l~~~~----~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~ 192 (575)
.+.+.+.+.. +..|++.+...+....++.+.+|+++ .+.+....++|..+++
T Consensus 301 --------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~~~ 356 (402)
T PRK11902 301 --------------KHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQ----------YALLSALASVGRVYVG 356 (402)
T ss_pred --------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH----------HHHHHHHHHHHHHHHH
Confidence 0223333333 34566677777777888888877533 3444445567777667
Q ss_pred hhhhhccccccchhHhHHHHHHHHHHHHHHHh
Q 008158 193 TVLVYIQDSVSWVIGFGIPTVLMIGAIILFLV 224 (575)
Q Consensus 193 ~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 224 (575)
.++|++.+..||+..|.+.+++.++++++.+.
T Consensus 357 ~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~ 388 (402)
T PRK11902 357 PTSGYLVEAYGWPGFYLMTVVIALPGLALLWL 388 (402)
T ss_pred HHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999888777776655543
No 190
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.87 E-value=2.7e-08 Score=108.78 Aligned_cols=152 Identities=9% Similarity=-0.055 Sum_probs=124.7
Q ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHH
Q 008158 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGM 98 (575)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~ 98 (575)
........++....+++...+++.|+++.+|.|+.+++.......++..++.+++|++.||+ |||+.+..+.++..++.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~g~~~~~~~~ 339 (495)
T PRK14995 261 ILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRL-GLRLVATGGMALSALSF 339 (495)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHH
Confidence 34444556666667777788899999999999999999999999999999999999999995 99999988888888777
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhH
Q 008158 99 LTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFN 178 (575)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 178 (575)
++...... ..+.+...+..++.|+|.|...+.......+..|+++ ++.+.+
T Consensus 340 ~~l~~~~~-----------------------~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~g~~~~ 390 (495)
T PRK14995 340 YGLAMTDF-----------------------STQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEK------AAAAGA 390 (495)
T ss_pred HHHHHhcC-----------------------CCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHh------cchHHH
Confidence 66654321 0133445667788899999988888888888888877 999999
Q ss_pred HHHHHHHHHHHHHhhhhhhccc
Q 008158 179 WYYTTFTVVILITQTVLVYIQD 200 (575)
Q Consensus 179 ~~~~~~~ig~~~~~~v~~~l~~ 200 (575)
.++...++|..+|+.+.|.+.+
T Consensus 391 ~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 391 IETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999888754
No 191
>PRK09848 glucuronide transporter; Provisional
Probab=98.85 E-value=4.5e-08 Score=105.53 Aligned_cols=163 Identities=14% Similarity=0.083 Sum_probs=119.2
Q ss_pred chhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHH
Q 008158 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (575)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~ 96 (575)
|.+.......++...+++......+.|+++.+|.+....++......++..++.++.++++||+ |+|+++.++.++..+
T Consensus 228 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~-g~~~~~~~g~~~~~i 306 (448)
T PRK09848 228 RPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARI-GKKNTFLIGALLGTC 306 (448)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 3344444555555566555556666777778887665555544444566778899999999995 999999999988888
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCc-ccccchhh
Q 008158 97 GMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTD-EGVKGINS 175 (575)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~-~~~~~r~~ 175 (575)
+.+...+.. ..+.+.+++..++.|+|.+...+...++.+|..|.++. .++++++.
T Consensus 307 ~~~~~~~~~------------------------~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~ 362 (448)
T PRK09848 307 GYLLFFWVS------------------------VWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGL 362 (448)
T ss_pred HHHHHHHcC------------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhH
Confidence 877666532 11445566777888999999999999999998876542 23345688
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhccccccc
Q 008158 176 FFNWYYTTFTVVILITQTVLVYIQDSVSW 204 (575)
Q Consensus 176 ~~~~~~~~~~ig~~~~~~v~~~l~~~~gw 204 (575)
.++.+++...+|..+|+.+.+++.+..||
T Consensus 363 ~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 363 TYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 89999999999999999988877554444
No 192
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.83 E-value=4.9e-08 Score=117.57 Aligned_cols=156 Identities=11% Similarity=0.043 Sum_probs=124.4
Q ss_pred HHHHHHHHhhhhHHHHHHHHhhhhCCChh-hHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHH
Q 008158 25 NETFERLATIGLLANFMVYLLKEYHMNQT-SAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTL 103 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~l~~yl~~~l~~~~~-~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~ 103 (575)
..++.....+....+++.|+.+.+|++.. +.+++.+...++..++.+++|+++||+ ++++++.++.++..++.++..+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~ 318 (1146)
T PRK08633 240 GLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRH-IELGLVPLGALGLALSLFLLPT 318 (1146)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eEccchhHHHHHHHHHHHHHHH
Confidence 33344444455677889999999999998 999999999999999999999999995 9999888888888777777665
Q ss_pred HhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHH
Q 008158 104 TAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTT 183 (575)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 183 (575)
.. +.+.+++..++.|++.++..+...+++.+..|++. |++++++.++.
T Consensus 319 ~~--------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------rg~~~~~~~~~ 366 (1146)
T PRK08633 319 AP--------------------------SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKE------LGKVLAANNFL 366 (1146)
T ss_pred hh--------------------------hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccc------hhhhhHHHHHH
Confidence 43 45566777888999999988888999999999877 99999999999
Q ss_pred HHHHHHHHhhhhhhccc-cccchhHhHHHHH
Q 008158 184 FTVVILITQTVLVYIQD-SVSWVIGFGIPTV 213 (575)
Q Consensus 184 ~~ig~~~~~~v~~~l~~-~~gw~~~f~~~~~ 213 (575)
.++|.++++.+++.+.. .+++...|++.+.
T Consensus 367 ~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~ 397 (1146)
T PRK08633 367 QNVGMLLFLALTTLFSGLGLSPAGLFYLIAL 397 (1146)
T ss_pred HHHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 99999888877776643 2345555554433
No 193
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.82 E-value=6.9e-08 Score=102.52 Aligned_cols=152 Identities=11% Similarity=0.023 Sum_probs=110.3
Q ss_pred hHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 008158 36 LLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKC 115 (575)
Q Consensus 36 ~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 115 (575)
....+|.|+++..| ++.+.+++.+...++...+..+.+++.||+++.++.+..+.++..++....+.++
T Consensus 227 ~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~---------- 295 (400)
T PRK11646 227 VMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS---------- 295 (400)
T ss_pred HHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh----------
Confidence 34567788876655 6788888888877766655555566666544767777778777777777666554
Q ss_pred CCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhh
Q 008158 116 DVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVL 195 (575)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~ 195 (575)
+...+.+..++.++|.+...|...++..|..|+++ |++.+++++...++|..+||.++
T Consensus 296 ----------------~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~ig~~l~ 353 (400)
T PRK11646 296 ----------------NLQQLFTLICLFYIGSIIAEPARETLSASLADARA------RGSYMGFSRLGLALGGAIGYIGG 353 (400)
T ss_pred ----------------hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCccc------chhhhhHHHHHHHHHHHhcccch
Confidence 34445666677888888888888999999999877 99999999999999999999999
Q ss_pred hhccccc---c-chhHhHHHHHHHHHHHH
Q 008158 196 VYIQDSV---S-WVIGFGIPTVLMIGAII 220 (575)
Q Consensus 196 ~~l~~~~---g-w~~~f~~~~~~~~i~~~ 220 (575)
|++.+.. + ....++...++.++..+
T Consensus 354 G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (400)
T PRK11646 354 GWLFDLGKALNQPELPWMMLGIIGLITLL 382 (400)
T ss_pred HHHHHHHhhcCCcchHHHHHHHHHHHHHH
Confidence 9998753 2 23444444444444433
No 194
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.80 E-value=1.1e-07 Score=101.88 Aligned_cols=162 Identities=14% Similarity=0.069 Sum_probs=133.4
Q ss_pred chhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHH
Q 008158 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (575)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~ 96 (575)
|....+++..++..++.....+..+.|.+..+|.+ ...+.+..+..+...++.++.++++||+ |+|+++..+.++.++
T Consensus 225 r~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~-gk~~~~~~~~~~~~~ 302 (428)
T PF13347_consen 225 RPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRF-GKKKVYIIGLLLAAL 302 (428)
T ss_pred chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHc-cceeehhhhHHHHHH
Confidence 55667777888887777766777777777778766 5677788888999999999999999995 999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCc-ccccchhh
Q 008158 97 GMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTD-EGVKGINS 175 (575)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~-~~~~~r~~ 175 (575)
+.++..+... .+.+.+++..++.|++.+...+...++++|..+.+|- .++++.|.
T Consensus 303 ~~~~~~~~~~------------------------~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~ 358 (428)
T PF13347_consen 303 GFLLLFFLGP------------------------GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGM 358 (428)
T ss_pred HHHHHHHHHh------------------------hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHH
Confidence 9888877641 1667788899999999999999999999999986542 34566788
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhccccccc
Q 008158 176 FFNWYYTTFTVVILITQTVLVYIQDSVSW 204 (575)
Q Consensus 176 ~~~~~~~~~~ig~~~~~~v~~~l~~~~gw 204 (575)
.++.+.....+|..+++.+.+.+.+..|+
T Consensus 359 ~~s~~~~~~k~~~~la~~i~g~~l~~~Gy 387 (428)
T PF13347_consen 359 YFSVNSFFIKIGQGLAGAIVGLLLALVGY 387 (428)
T ss_pred HHHhhhhhhHHHHHHHHHHHHHHHHHhCc
Confidence 99999999999999999988877554443
No 195
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.80 E-value=5e-08 Score=117.48 Aligned_cols=182 Identities=8% Similarity=-0.065 Sum_probs=128.5
Q ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHH
Q 008158 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGM 98 (575)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~ 98 (575)
++......++..+..+++.++++.|+.+.+|.+..+.+++.+.+.++..++.++.|+++|++ ++++.+..+.++..++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~-~~~~~~~~~~~~~~~~~ 305 (1140)
T PRK06814 227 IWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGR-ITLLYVPIGALLMGLFG 305 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eeeeeehHHHHHHHHHH
Confidence 44444445555566667788999999999999999999999999999999999999999985 77776665665555554
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhH
Q 008158 99 LTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFN 178 (575)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 178 (575)
+.+.+... ..... .... ....+... ..+.+.+++..++.|++.+...+...+++.+.+|++. ||++++
T Consensus 306 ~~l~~~~~-~~~~~-~~~~---~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~G~v~g 373 (1140)
T PRK06814 306 LDLAFASS-SVPAE-PAQL---KSILVFLS-KRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAH------RARVIA 373 (1140)
T ss_pred HHHHhccc-ccccc-cccc---cchhhhhc-ccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCccc------ceeeeH
Confidence 44443200 00000 0000 00000000 0144567778888999999999999999999999988 999999
Q ss_pred HHHHHHHHHHHHHhhhhhhccc-cccchhHhHHHHH
Q 008158 179 WYYTTFTVVILITQTVLVYIQD-SVSWVIGFGIPTV 213 (575)
Q Consensus 179 ~~~~~~~ig~~~~~~v~~~l~~-~~gw~~~f~~~~~ 213 (575)
..+...++|..+++.+++.+.+ ..++...|++.++
T Consensus 374 ~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~ 409 (1140)
T PRK06814 374 ANNVLNAAFMVAGTIILALLQALGFSIPWIILFIAL 409 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 9999999999999999888863 4566666655444
No 196
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.80 E-value=1e-06 Score=89.51 Aligned_cols=152 Identities=20% Similarity=0.159 Sum_probs=107.1
Q ss_pred HhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCC
Q 008158 44 LLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFG 123 (575)
Q Consensus 44 l~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (575)
+-+++|++..+++.+.........+..++.|.++||+ |||+..+..+++..++.+.--. .
T Consensus 60 LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~-Grk~~cl~~cily~~scl~k~~-~------------------ 119 (354)
T PF05631_consen 60 LYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRY-GRKKACLLFCILYSLSCLTKHS-S------------------ 119 (354)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHhc-c------------------
Confidence 3467999999999999999999999999999999995 9999999999988887754322 1
Q ss_pred ccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHH-HHHHHHHHHHhhhhhhccccc
Q 008158 124 QCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYY-TTFTVVILITQTVLVYIQDSV 202 (575)
Q Consensus 124 ~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~ig~~~~~~v~~~l~~~~ 202 (575)
++..++++|++.|++....+++--+.......++. -.++..+.-++... ....+-++.+..++-++.+..
T Consensus 120 --------~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g-~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~ 190 (354)
T PF05631_consen 120 --------NYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRG-FPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWF 190 (354)
T ss_pred --------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHh
Confidence 67889999999999999988877776655442221 11122444444333 222233444445555665555
Q ss_pred cc--hhHhHHHHHHHHHHHHHHHh
Q 008158 203 SW--VIGFGIPTVLMIGAIILFLV 224 (575)
Q Consensus 203 gw--~~~f~~~~~~~~i~~~~~~~ 224 (575)
+. ..+|..++++.+++.++...
T Consensus 191 ~~g~vaPF~~a~~~l~~~~~~I~~ 214 (354)
T PF05631_consen 191 GFGPVAPFDAAIVLLAVAAVLILK 214 (354)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHh
Confidence 44 67888777777766665543
No 197
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.79 E-value=1.8e-07 Score=99.06 Aligned_cols=159 Identities=10% Similarity=-0.074 Sum_probs=117.9
Q ss_pred HHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 008158 31 LATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQL 110 (575)
Q Consensus 31 ~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~ 110 (575)
.........++.|+++.+|.++.+.|.+.....++..++.++.+++.||+ ++|+++..+.. ..+.....++.+
T Consensus 219 ~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~-~~~~~~~~g~~-~~~~~~~~~~~~----- 291 (393)
T PRK11195 219 GAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLE-TVLRVLPAGIL-MGLVVLLMALQH----- 291 (393)
T ss_pred HHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccchHHHHHH-HHHHHHHHHHHh-----
Confidence 33444556677888889999999999999999999999999999999995 99988877753 333333333322
Q ss_pred CCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHH
Q 008158 111 HPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILI 190 (575)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~ 190 (575)
+.+...+..++.|++.+...+...+.+.+..|+ + .++++..+..+...++|..+
T Consensus 292 ---------------------~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~-~----~~~g~~~a~~~~~~~~~~~~ 345 (393)
T PRK11195 292 ---------------------SLLPAYPLLILIGALGGFFVVPMNALLQHRGHV-L----VGAGHSIAVQNFNENLAMLL 345 (393)
T ss_pred ---------------------HHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcc-c----ccchhHHHHHhHHHHHHHHH
Confidence 345556667788999888888778877775443 2 13799999999999999999
Q ss_pred HhhhhhhccccccchhHhHHHHHHHHHHHHHHH
Q 008158 191 TQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFL 223 (575)
Q Consensus 191 ~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~ 223 (575)
+..+.+.+ +..|-+..+.+.+...++.+.+.+
T Consensus 346 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 377 (393)
T PRK11195 346 MLGLYSLL-VKLGVPVVAVIVGFGLLVALAMAL 377 (393)
T ss_pred HHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHH
Confidence 99888866 457777777776655555554443
No 198
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.75 E-value=1.9e-07 Score=97.95 Aligned_cols=167 Identities=13% Similarity=-0.055 Sum_probs=111.4
Q ss_pred chhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccc---hHHHHH-HHH
Q 008158 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGR---FKTITF-ASI 92 (575)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr---r~~~~~-~~~ 92 (575)
|..+.+....++....+|++.+++|.|+++ .|++.. .+.......+...++ .++++||. .| |+.... ...
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~-~r~~~r~~~~~~~~~ 265 (368)
T TIGR00903 192 KDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGLIG---VAVIPDRV-ARAGLRSIYIRAAAL 265 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHHHH---HHHhhHHh-hhhhhHHHHHHHHHH
Confidence 445666667888888899999999999964 677754 555555555444444 47788874 54 333332 333
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccc
Q 008158 93 AAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKG 172 (575)
Q Consensus 93 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 172 (575)
+..++....+... +....++...+.+++.....+...++.+|.+|++.
T Consensus 266 ~~a~~~~~~~~~~--------------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------ 313 (368)
T TIGR00903 266 LIAAFFLALAFEL--------------------------NRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKEL------ 313 (368)
T ss_pred HHHHHHHHHHHcc--------------------------ccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhh------
Confidence 3333332333221 12223444455667777777778889999999988
Q ss_pred hhhhhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHH
Q 008158 173 INSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFL 223 (575)
Q Consensus 173 r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~ 223 (575)
|+++.++.+...++|+..+|.+.+.+.. +.+..|.+.++..+++.+..+
T Consensus 314 rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 314 HGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred cCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988887763 666777766666555555543
No 199
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.74 E-value=2.1e-07 Score=99.46 Aligned_cols=185 Identities=14% Similarity=0.020 Sum_probs=115.4
Q ss_pred hhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHH
Q 008158 18 AMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILG 97 (575)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~ 97 (575)
..+++....++..-.+.+...++|.|+++.++ ..+......+..+...+..+++|+++|| +|+||++.++.++..++
T Consensus 253 ~~Wllslly~~tFG~fvg~s~~lp~~~~~~~~--~~~~l~~~~l~~l~~~l~rplgG~LADR-iG~~~vl~~~~i~~~i~ 329 (462)
T PRK15034 253 HLWLLSLLYLATFGSFIGFSAGFAMLAKTQFP--DVNILRLAFFGPFIGAIARSVGGAISDK-FGGVRVTLINFIFMAIF 329 (462)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--hHHHHHHHHHHHHHHHHHHHhhHHHHHh-cCchHHHHHHHHHHHHH
Confidence 34444444455444444566688899887663 3333333444567788899999999999 59999999998877777
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCc----------
Q 008158 98 MLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTD---------- 167 (575)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~---------- 167 (575)
........ |. .+..+...+.+..+...++.|.-......++.+.+|+++.
T Consensus 330 ~~~~~l~l--p~------------------~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~ 389 (462)
T PRK15034 330 SALLFLTL--PG------------------TGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSD 389 (462)
T ss_pred HHHHHHHh--cc------------------ccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccch
Confidence 65443322 11 0011344455544444444444455556666666663100
Q ss_pred -----ccccchhhhhHHHHHHHHHHHHHHhhhhhhccccc-cchhHhHHHHHHHHHHHHHHHhc
Q 008158 168 -----EGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSV-SWVIGFGIPTVLMIGAIILFLVG 225 (575)
Q Consensus 168 -----~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~-gw~~~f~~~~~~~~i~~~~~~~~ 225 (575)
..+++-+...++......+|+++.|.+.|+..+.. ++...|+...+..++++++.+..
T Consensus 390 ~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~ 453 (462)
T PRK15034 390 EQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLV 453 (462)
T ss_pred hHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 01124677888888888888888897777765543 47778887777777777665553
No 200
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.72 E-value=1.1e-07 Score=99.06 Aligned_cols=143 Identities=13% Similarity=0.030 Sum_probs=108.4
Q ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHH-HHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHH
Q 008158 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWG-GVTNFAPLLGAFISDTYIGRFKTITFASIAAILG 97 (575)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~-~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~ 97 (575)
.+.++...++...+++...+.++.|+++ +|++..+.+.+..+.. ++..++.+++|+++||+ |||+.+..+.++..++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~~ 288 (356)
T TIGR00901 211 ALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPL-NILYALLLFGIVQALT 288 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHH
Confidence 4444555566677778888999999987 9999999998888766 56788999999999995 9999988888887776
Q ss_pred HHHHHHHh-hcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhh
Q 008158 98 MLTVTLTA-WLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSF 176 (575)
Q Consensus 98 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 176 (575)
.....+.. +... .. . +..+.+.+....++.+++.+...+...++..|.+|+++ |++.
T Consensus 289 ~~~~~~~~~~~~~-------------~~-~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------~g~~ 346 (356)
T TIGR00901 289 NAGFVWLASNGHH-------------DG-I--TFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKF------GATQ 346 (356)
T ss_pred HHHHHHHHhcCcc-------------cc-c--ccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCc------cHHH
Confidence 66554431 1000 00 0 00134567777888899999999999999999999988 9999
Q ss_pred hHHHHHHHH
Q 008158 177 FNWYYTTFT 185 (575)
Q Consensus 177 ~~~~~~~~~ 185 (575)
+++++...+
T Consensus 347 ~g~~~~~~~ 355 (356)
T TIGR00901 347 MALLSSLSA 355 (356)
T ss_pred HHHHHHHHh
Confidence 999877654
No 201
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.71 E-value=9.2e-08 Score=103.91 Aligned_cols=176 Identities=13% Similarity=0.120 Sum_probs=146.1
Q ss_pred chhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhccc--chHHHHHHHHHH
Q 008158 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIG--RFKTITFASIAA 94 (575)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~G--rr~~~~~~~~l~ 94 (575)
+..+.+.....+..++++.-...++.|.. .+++++++++.+.++..+...++.++.|+++|+. . ++.++.++.+..
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~-~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKP-GIRALVLFLLTLLIA 375 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc-ccchHHHHHHHHHHH
Confidence 34555556777777777777777777777 8999999999999999999999999999999995 7 334666666666
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchh
Q 008158 95 ILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGIN 174 (575)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 174 (575)
.++...+++.. +++.++..-.+.|+..|.+.+.....+.|..+.++ ..
T Consensus 376 gl~~~~~p~~~--------------------------~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~------l~ 423 (509)
T KOG2504|consen 376 GLARLFLPFAT--------------------------TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEK------LS 423 (509)
T ss_pred HHHHHHHHHhc--------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhh------cc
Confidence 66666666655 56778888899999999999988889999999877 89
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhhcccccc-chhHhHHHHHHHHHHHHHHHhcc
Q 008158 175 SFFNWYYTTFTVVILITQTVLVYIQDSVS-WVIGFGIPTVLMIGAIILFLVGK 226 (575)
Q Consensus 175 ~~~~~~~~~~~ig~~~~~~v~~~l~~~~g-w~~~f~~~~~~~~i~~~~~~~~~ 226 (575)
.++++......++.++||.+.|++.+..+ |...|+..+++.+++...+++..
T Consensus 424 ~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 424 NAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred hHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 99999999999999999999999999887 99999988887777776665554
No 202
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.69 E-value=3.4e-07 Score=96.76 Aligned_cols=70 Identities=13% Similarity=0.178 Sum_probs=59.5
Q ss_pred hhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHh
Q 008158 35 GLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTA 105 (575)
Q Consensus 35 ~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~ 105 (575)
......+.|+.+++|++..+.+.+.....++..++.++.|++.||+ |||+++..+..+..++.+...+..
T Consensus 221 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~ 290 (392)
T PRK10473 221 TFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIF-KPRTLMLTSQVLFLAAGITLALSP 290 (392)
T ss_pred HHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445556788889999999999999999999999999999999995 999999999988888877776653
No 203
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.69 E-value=7.2e-07 Score=93.51 Aligned_cols=142 Identities=9% Similarity=0.056 Sum_probs=94.7
Q ss_pred HHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHH
Q 008158 25 NETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLT 104 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~ 104 (575)
..++...+.+......+.++.+.+|+++.+.+.+.....++..++.+++|++.||+ |||+++..+..+..+..+.....
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~ 280 (377)
T PRK11102 202 ASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRV-GALNMLRFGLWIQFIMGIWLVVS 280 (377)
T ss_pred HHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444555566667788888999999999999999999999999999999995 99999988887655443333222
Q ss_pred hhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHH
Q 008158 105 AWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTF 184 (575)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 184 (575)
...+ .+.+...++..+.+.+.+...+.....+.|..| ++ +++..+......
T Consensus 281 ~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~g~~~~~~~~~~ 331 (377)
T PRK11102 281 ALLD----------------------LGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HM------AGTASSLAGTLR 331 (377)
T ss_pred HHHh----------------------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-cc------chHHHHHHHHHH
Confidence 1100 023334444444455555555555666777766 44 777887765543
Q ss_pred -HHHHHHHhhhhh
Q 008158 185 -TVVILITQTVLV 196 (575)
Q Consensus 185 -~ig~~~~~~v~~ 196 (575)
.+|+.+++.+++
T Consensus 332 ~~~g~~~g~~~~~ 344 (377)
T PRK11102 332 FGIGAIVGALLSL 344 (377)
T ss_pred HHHHHHHHHHHHh
Confidence 467777776654
No 204
>TIGR00898 2A0119 cation transport protein.
Probab=98.68 E-value=1e-07 Score=104.29 Aligned_cols=133 Identities=17% Similarity=0.051 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHH
Q 008158 59 LNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVM 138 (575)
Q Consensus 59 ~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 138 (575)
.....+....+.++++++.||+ |||+++..+.++..++.+...+..+ . ......+
T Consensus 361 ~~~~~~~~i~~~~~~~~l~dr~-grr~~~~~~~~~~~~~~l~~~~~~~-----------------------~-~~~~~~~ 415 (505)
T TIGR00898 361 LFISGLVELPAKLITLLLIDRL-GRRYTMAASLLLAGVALLLLLFVPV-----------------------D-LYFLRTA 415 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHcCC-----------------------C-chHHHHH
Confidence 3444566677888999999995 9999999998888887776665431 0 1123344
Q ss_pred HHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHH
Q 008158 139 GLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGA 218 (575)
Q Consensus 139 ~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~ 218 (575)
..++.+++.+...+..+.+.+|.+|++. |+.++++.+....+|++++|.+.+ +.+ .++...+++.+++.+++
T Consensus 416 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~ig~~i~p~i~~-~~~-~~~~~~~~~~~~~~~~~ 487 (505)
T TIGR00898 416 LAVLGKFGITSAFQMVYLYTAELYPTVV------RNLGVGVCSTMARVGSIISPFLVY-LGE-KWLFLPLVLFGGLALLA 487 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccHHH------HhhhHhHHHHHHHHHHHHHhHHHH-HHH-HHHhhHHHHHHHHHHHH
Confidence 4455666666667788899999999877 999999999999999999999988 443 55666776666555555
Q ss_pred HHHHHh
Q 008158 219 IILFLV 224 (575)
Q Consensus 219 ~~~~~~ 224 (575)
.++.++
T Consensus 488 ~~~~~~ 493 (505)
T TIGR00898 488 GILTLF 493 (505)
T ss_pred HHHHHc
Confidence 554444
No 205
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.67 E-value=9e-07 Score=93.22 Aligned_cols=118 Identities=14% Similarity=0.147 Sum_probs=90.6
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHHHHH
Q 008158 406 TLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANS 485 (575)
Q Consensus 406 ~~~~~i~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g 485 (575)
.+.+.+.+|+....+=++.+..+ .++|..+|.-++.|+..+.++.+..+|+...+||+.|.++++
T Consensus 434 GHv~v~~lgLa~~~~Rf~~~S~L---------------~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~ 498 (618)
T KOG3762|consen 434 GHVNVMYLGLACNVGRFLYYSYL---------------QNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQG 498 (618)
T ss_pred cccceeeehhhHHHHHHHHHHHh---------------cCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHH
Confidence 34445777877777777777766 478888888899999999999999999999999999999999
Q ss_pred HHHH-HHHHHHHHHHHHHHHhhhhcccCCCCCcccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 008158 486 LLFC-SFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCARRYRY 554 (575)
Q Consensus 486 ~~~~-~~~lg~~l~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~v~~i~~~~~~~~~~~ 554 (575)
+... ...+|-.+|+.+.+.+...+ +..-.|..+++.+++.++.+..+-+..++
T Consensus 499 l~~g~f~GlG~g~GslIGG~~v~~f----------------g~~ttf~~~giAcl~~l~~~~~iq~~l~~ 552 (618)
T KOG3762|consen 499 LLQGIFHGLGKGLGSLIGGFVVERF----------------GARTTFRIFGIACLVTLALFISIQLLLKR 552 (618)
T ss_pred HHHHHhcccCcchhhhhhhhhheee----------------hhHHHHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 9884 56688899998888776543 23456777777777776666655443333
No 206
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.66 E-value=1.9e-05 Score=83.65 Aligned_cols=103 Identities=13% Similarity=0.072 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHH
Q 008158 59 LNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVM 138 (575)
Q Consensus 59 ~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 138 (575)
.++......+..++++.+.|+ +|.|..+.++...+..-....-.. |.+.+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~-i~~K~~lv~ga~~y~~f~~gfl~~---------------------------N~y~~yf 107 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNF-LGPKWALVIGATCYAAFPLGFLFP---------------------------NSYYLYF 107 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHH-hhHHHHHHHHhHHHHHHHHHHHhc---------------------------chHHHHH
Confidence 777778888999999999999 599999999999988776666553 5577899
Q ss_pred HHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhh
Q 008158 139 GLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVL 195 (575)
Q Consensus 139 ~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~ 195 (575)
.-++.|+|.+..+..--.+.++...+++ +.+..++.....+.+.++|..+.
T Consensus 108 ssallG~Gaallw~GqG~ylt~~st~~t------ie~Nisi~Wai~~~~li~Ggi~l 158 (461)
T KOG3098|consen 108 SSALLGFGAALLWTGQGGYLTSNSTRET------IERNISIFWAIGQSSLIIGGIIL 158 (461)
T ss_pred HHHHhhhhHHheecccceehhhcCChhh------HHHHHHHHHHHHHHHHHhhhHhh
Confidence 9999999999999998999998887766 77777777777777777775443
No 207
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.62 E-value=2e-07 Score=96.27 Aligned_cols=141 Identities=21% Similarity=0.238 Sum_probs=115.9
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHhhhhCCC-hhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHH
Q 008158 22 ILGNETFERLATIGLLANFMVYLLKEYHMN-QTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLT 100 (575)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~-~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~ 100 (575)
.+...++....++....+++.|+.+.+|++ ..+.+.+.+...+...++.++.|+++||+ |+|+..........++.+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~ 289 (352)
T PF07690_consen 211 LLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRF-GRRRRLLIAILLLILGALG 289 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHHHHHH
Confidence 344444445566678888999999999999 79999999999999999999999999995 9988887777777776666
Q ss_pred HHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHH
Q 008158 101 VTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWY 180 (575)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 180 (575)
..+... ..+....++..++.|++.+...+...++..|.+|+++ |+++.+.+
T Consensus 290 ~~~~~~-----------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~ 340 (352)
T PF07690_consen 290 LLLLPF-----------------------SSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEY------RGTAFGLF 340 (352)
T ss_dssp HCCSHH-----------------------HCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCH------HHHHHHHH
T ss_pred HHHHHH-----------------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHHH
Confidence 655432 1144556667788999999999999999999999877 99999999
Q ss_pred HHHHHHHHHHHh
Q 008158 181 YTTFTVVILITQ 192 (575)
Q Consensus 181 ~~~~~ig~~~~~ 192 (575)
+...++|..+||
T Consensus 341 ~~~~~~~~~igP 352 (352)
T PF07690_consen 341 NSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHCC
Confidence 999999999987
No 208
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.61 E-value=6.4e-07 Score=97.34 Aligned_cols=165 Identities=13% Similarity=0.050 Sum_probs=115.1
Q ss_pred chhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHH
Q 008158 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (575)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~ 96 (575)
|.+..++...++.....+...+..+ |..+...-+....+.+.....++..++.++.++++||+ |||+++..+.++.++
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~-y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gkk~~~~~~~~~~~~ 308 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAI-YYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSL-SRRILWAGASIFPVL 308 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhee-eEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHH
Confidence 4444555555556555444444444 44433333555666677766788888999999999995 999999988887776
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCC-cccccchhh
Q 008158 97 GMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATT-DEGVKGINS 175 (575)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~-~~~~~~r~~ 175 (575)
+.+...+....+ ..+.+.+++.-++.|++.+...+...++++|..+.++ +.++++.|.
T Consensus 309 ~~~~~~~~~~~~---------------------~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~ 367 (473)
T PRK10429 309 SCGVLLLMGLAA---------------------PHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESI 367 (473)
T ss_pred HHHHHHHHhccC---------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhH
Confidence 665554321000 1144556666778899999999999999999987543 344456677
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhccccccc
Q 008158 176 FFNWYYTTFTVVILITQTVLVYIQDSVSW 204 (575)
Q Consensus 176 ~~~~~~~~~~ig~~~~~~v~~~l~~~~gw 204 (575)
.++...+...+|..+++.+.|++.+..|+
T Consensus 368 ~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 368 AYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 89999999999999999999888765554
No 209
>PRK11043 putative transporter; Provisional
Probab=98.57 E-value=2.7e-06 Score=90.16 Aligned_cols=145 Identities=9% Similarity=0.032 Sum_probs=103.8
Q ss_pred HHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 008158 31 LATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQL 110 (575)
Q Consensus 31 ~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~ 110 (575)
..++......+.|++ ++|++..+.+.......++..++.++++++.||+ |+|+.+.....+..++.+........+
T Consensus 217 ~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 292 (401)
T PRK11043 217 AAFFAWLTGSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKW-GGEQLLPWLLVLFAVSVIAIWLASLLS-- 292 (401)
T ss_pred HHHHHHHHHhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHHHHhc--
Confidence 444555666777775 5899999999988888888899999999999995 999987666665555544433221100
Q ss_pred CCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHH
Q 008158 111 HPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILI 190 (575)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~ 190 (575)
..+...+++...+.|++.+...+.......|..|+ + ++++.++++.....++..
T Consensus 293 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~g~~~g~~~~~~~~~~~~ 346 (401)
T PRK11043 293 -------------------HPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQ-A------TGKAAALQNTLQLGLCFL 346 (401)
T ss_pred -------------------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcc-c------ChHHHHHHHHHHHHHHHH
Confidence 00233445556677888888888887777777653 4 899999999888888888
Q ss_pred Hhhhhhhccccccch
Q 008158 191 TQTVLVYIQDSVSWV 205 (575)
Q Consensus 191 ~~~v~~~l~~~~gw~ 205 (575)
++.+.+.+.+.....
T Consensus 347 ~~~~~g~l~~~~~~~ 361 (401)
T PRK11043 347 ASLLVSALISTPLLT 361 (401)
T ss_pred HHHHHHHccCCChhH
Confidence 888888887643333
No 210
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.56 E-value=1.9e-06 Score=86.97 Aligned_cols=163 Identities=12% Similarity=0.131 Sum_probs=129.1
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHH
Q 008158 20 PYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGML 99 (575)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~ 99 (575)
+.+...--+.++.+|.+..++|.++. +.|+|..++|++.+...+......+..-.+++|.-.+|+.......++.+|.+
T Consensus 211 W~vtLfmGlqS~~~Y~~~~WLP~ili-~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~ 289 (395)
T COG2807 211 WQVTLFMGLQSLLYYIVIGWLPAILI-DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLV 289 (395)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHH-HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHH
Confidence 33334444567888999999999987 78999999999999999999999999999999865788888888888999998
Q ss_pred HHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHH
Q 008158 100 TVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNW 179 (575)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 179 (575)
.+.+... +.. +...++.|+|.|+.+|....++.+..++.+ .-++..+.
T Consensus 290 G~~~~P~-------------------------~~~--~lw~~llG~G~G~~F~laL~li~~rs~~a~-----~Aa~LSgm 337 (395)
T COG2807 290 GLLLAPG-------------------------QLP--ILWALLLGLGQGGAFPLALTLILLRSSDAA-----IAAALSGM 337 (395)
T ss_pred HHHHhhh-------------------------hHH--HHHHHHHhCccchHHHHHHHHHHhhcCChH-----HHHHHHHH
Confidence 8887642 222 222588999999999999999999887644 36677777
Q ss_pred HHHHHHHHHHHHhhhhhhccccc-cchhHhHHHHHHH
Q 008158 180 YYTTFTVVILITQTVLVYIQDSV-SWVIGFGIPTVLM 215 (575)
Q Consensus 180 ~~~~~~ig~~~~~~v~~~l~~~~-gw~~~f~~~~~~~ 215 (575)
-+-...+=+.+||.+.|++.|.. +|+.....-+...
T Consensus 338 aQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~ 374 (395)
T COG2807 338 AQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALAT 374 (395)
T ss_pred hhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHH
Confidence 77777788889999999998865 5876665444433
No 211
>PRK09669 putative symporter YagG; Provisional
Probab=98.56 E-value=1.1e-06 Score=94.63 Aligned_cols=141 Identities=13% Similarity=0.086 Sum_probs=100.0
Q ss_pred HHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 008158 39 NFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDVA 118 (575)
Q Consensus 39 ~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (575)
.+..|..+..--++...+.+.....+...++.+++++++||+ |||+.+..+.++.+++.....+..
T Consensus 250 ~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gk~~~~~~~~~~~~~~~~~~~~~~------------- 315 (444)
T PRK09669 250 GATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKF-DRVRAFKWTIVAFVILSALIFFIP------------- 315 (444)
T ss_pred hhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHhC-------------
Confidence 344454433222333344455556677778888999999995 999999888776665443333221
Q ss_pred CCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCc-ccccchhhhhHHHHHHHHHHHHHHhhhhhh
Q 008158 119 KPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTD-EGVKGINSFFNWYYTTFTVVILITQTVLVY 197 (575)
Q Consensus 119 ~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~-~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~ 197 (575)
..+.+.+++..++.|++.+...+...++++|..+.+|. .++++.+..++.+.++..+|..+|+.++|+
T Consensus 316 -----------~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ 384 (444)
T PRK09669 316 -----------PSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGW 384 (444)
T ss_pred -----------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11455667777889999999999999999999885442 344556778899999999999999999998
Q ss_pred ccccccc
Q 008158 198 IQDSVSW 204 (575)
Q Consensus 198 l~~~~gw 204 (575)
+.+..|+
T Consensus 385 ll~~~Gy 391 (444)
T PRK09669 385 ILAWVDY 391 (444)
T ss_pred HHHHcCC
Confidence 8766665
No 212
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.51 E-value=1.6e-06 Score=93.20 Aligned_cols=174 Identities=15% Similarity=0.083 Sum_probs=120.4
Q ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccc--------hHHHHH-
Q 008158 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGR--------FKTITF- 89 (575)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr--------r~~~~~- 89 (575)
++.+....+++..+++.+.+++|.|+.+.+|++..+.|++.++..+.+.+..+++|.++||. -+ ||.+-.
T Consensus 260 vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l-~~~~ls~t~~rkifn~i 338 (466)
T KOG2532|consen 260 VWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRL-TFRILSETTVRKIFNTI 338 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hhccCchHhHHHHHHhH
Confidence 55777899999999999999999999999999999999999999999999999999999996 33 233221
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCccc
Q 008158 90 ASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEG 169 (575)
Q Consensus 90 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~ 169 (575)
+...-++..+.+++.. |.. .......+.++..+.|+..+++..+ ..|..|++
T Consensus 339 ~~~~~ai~l~~l~~~~-------------------~~~-~~~a~~~l~~~~~~~g~~~~Gf~~~----~~~~apq~---- 390 (466)
T KOG2532|consen 339 AFGGPAVFLLVLAFTS-------------------DEH-RLLAVILLTIAIGLSGFNISGFYKN----HQDIAPQH---- 390 (466)
T ss_pred HHHHHHHHHHeeeecC-------------------CCc-chHHHHHHHHHHHHcccchhhhHhh----hhhccchH----
Confidence 1112222222222221 000 0112222333333344444443333 22223332
Q ss_pred ccchhhhhHHHHHHHHHHHHHHhhhhhhcccc---ccchhHhHHHHHHHHHHHHHHHh
Q 008158 170 VKGINSFFNWYYTTFTVVILITQTVLVYIQDS---VSWVIGFGIPTVLMIGAIILFLV 224 (575)
Q Consensus 170 ~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~---~gw~~~f~~~~~~~~i~~~~~~~ 224 (575)
-+..+++.+...++.++++|.+.+.+... -.|+++|++.+++.+++-+.+.+
T Consensus 391 ---a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~ 445 (466)
T KOG2532|consen 391 ---AGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLF 445 (466)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeE
Confidence 58999999999999999999999998842 37999999998887777766554
No 213
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.47 E-value=5.7e-06 Score=87.64 Aligned_cols=154 Identities=14% Similarity=0.092 Sum_probs=121.2
Q ss_pred HHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHH
Q 008158 25 NETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLT 104 (575)
Q Consensus 25 ~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~ 104 (575)
..++...+..-..+.+..|.+-.+|.++.+..........+..++.++...+.+| +|+|+++.++.++.+++.++..+.
T Consensus 244 ~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~-~gkk~~~~~~~~~~~i~~~~~~f~ 322 (467)
T COG2211 244 MNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKK-FGKKKLFLIGLLLLAVGYLLLYFT 322 (467)
T ss_pred HHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hchHHHHHHHHHHHHHHHHHHHhh
Confidence 4555545444444555666666778788888888888888888889999999999 599999999999999999998886
Q ss_pred hhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCC-cccccchhhhhHHHHHH
Q 008158 105 AWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATT-DEGVKGINSFFNWYYTT 183 (575)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~-~~~~~~r~~~~~~~~~~ 183 (575)
. ..+.+++++..++.++|.+...+...++++|..+-+| ..++++-|..++.+...
T Consensus 323 ~------------------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~ 378 (467)
T COG2211 323 P------------------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFF 378 (467)
T ss_pred c------------------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHH
Confidence 4 2267788888999999999999999999999988655 34455667778888888
Q ss_pred HHHHHHHHhhhhhhcccccc
Q 008158 184 FTVVILITQTVLVYIQDSVS 203 (575)
Q Consensus 184 ~~ig~~~~~~v~~~l~~~~g 203 (575)
.=+|..++..+.|++....|
T Consensus 379 ~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 379 RKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred HHHHHHHHHHHHHHHHHHcC
Confidence 88888888877777654433
No 214
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.47 E-value=4.1e-06 Score=73.61 Aligned_cols=131 Identities=14% Similarity=0.239 Sum_probs=91.0
Q ss_pred hhHhhHhhhhcccchhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHhHhhhhcccccCCCccchhHHHHHHHHH
Q 008158 376 SMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLIL 455 (575)
Q Consensus 376 ~~~~~~i~~~~~~~~~~~~~~r~~~r~~~~~~~~~i~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l 455 (575)
..++.++..++.+++ .||.++| +.+..+..+..++.+..... .+.+......++
T Consensus 7 ~~~~~~~~~~~~g~~----~d~~g~~-------~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~ 60 (141)
T TIGR00880 7 YALGQLIYSPLSGLL----TDRFGRK-------PVLLVGLFIFVLSTAMFALS---------------SNITVLIIARFL 60 (141)
T ss_pred ehhHHHHHHhhHHHH----Hhhcchh-------HHHHHHHHHHHHHHHHHHHh---------------ccHHHHHHHHHH
Confidence 334444445543333 6665443 44566666666665554432 244555666788
Q ss_pred HHHHHHHHhhhhHHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCCCCcchhHHHHHHHH
Q 008158 456 MGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIA 535 (575)
Q Consensus 456 ~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a 535 (575)
.+++.+...+....++.|.+|++.|+++.++.++...++..+++.+.+.+.+.. +..+.|.+.+
T Consensus 61 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----------------~~~~~~~~~~ 124 (141)
T TIGR00880 61 QGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFL----------------GWRAPFLFLA 124 (141)
T ss_pred HHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhccc----------------chHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999876532 2345677666
Q ss_pred HHHHHHHHHHHHH
Q 008158 536 GLGGLNIVYFLYC 548 (575)
Q Consensus 536 ~i~~v~~i~~~~~ 548 (575)
.+.+++.+..++.
T Consensus 125 ~~~~~~~~~~~~~ 137 (141)
T TIGR00880 125 ILALAAFILLAFL 137 (141)
T ss_pred HHHHHHHHHHhhc
Confidence 6666665555544
No 215
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.44 E-value=3e-06 Score=90.36 Aligned_cols=162 Identities=14% Similarity=-0.025 Sum_probs=114.3
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHhhh-hCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHH
Q 008158 21 YILGNETFERLATIGLLANFMVYLLKE-YHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGML 99 (575)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~l~~yl~~~-l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~ 99 (575)
..+...++-.....+..++++.|+.+. .+.+....+...+.+.....++.+++|+++||+ ++|+++.++..+.++..+
T Consensus 236 ~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~-~~~~~l~i~~~~~~~~~l 314 (410)
T TIGR00885 236 EGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYL-AAHKVLMAYAIIGMALCL 314 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHH
Confidence 333344443333345677888998653 244555556667777788899999999999994 999999888888877777
Q ss_pred HHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHH
Q 008158 100 TVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNW 179 (575)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 179 (575)
+..+.. +. ......++.|++.+.++|...+...+..+++. + ...+.
T Consensus 315 l~~~~~--------------------------~~-~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~------~-~~s~~ 360 (410)
T TIGR00885 315 GSIFAG--------------------------GH-VGLYCLTLCSAFMSLMFPTIYGIALKGLGQDT------K-YGAAG 360 (410)
T ss_pred HHHHcC--------------------------Ch-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh------h-hhHHH
Confidence 776643 11 23566667888888899999999999998644 2 22222
Q ss_pred HHHHHHHHHHHHhhhhhhccccc------cchhHhHHHHHHHHHH
Q 008158 180 YYTTFTVVILITQTVLVYIQDSV------SWVIGFGIPTVLMIGA 218 (575)
Q Consensus 180 ~~~~~~ig~~~~~~v~~~l~~~~------gw~~~f~~~~~~~~i~ 218 (575)
..++ .+|+.+.|.+.|++.|.. +.+..|+++.++.+..
T Consensus 361 l~~~-~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 404 (410)
T TIGR00885 361 LVMA-IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFAVI 404 (410)
T ss_pred HHHH-HhccchHHHHHHHHHHHhcccccCccchHHHHHHHHHHHH
Confidence 2333 399999999999999843 4788898877765543
No 216
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.42 E-value=4.1e-06 Score=88.70 Aligned_cols=180 Identities=11% Similarity=0.028 Sum_probs=131.6
Q ss_pred hhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHH
Q 008158 18 AMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILG 97 (575)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~ 97 (575)
.+...+...++...+.-...++...|+++.-+.+....+.+.+...+.-.+.-.+.+++..|+ |-|+++.++.+..++=
T Consensus 208 ~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~-g~~~ll~~a~~~~~vR 286 (400)
T PF03825_consen 208 RFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRF-GIKWLLLLALVAYAVR 286 (400)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHH
Confidence 344444555555666666778889998865557777778777777777777778889999995 9999999999998888
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhh
Q 008158 98 MLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFF 177 (575)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 177 (575)
..+.+...+ |. ........++-.++|+..|....+...++.+..|++. |+++-
T Consensus 287 ~~l~a~~~~-~~--------------------~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~------~at~Q 339 (400)
T PF03825_consen 287 WLLYAYFSD-PW--------------------PFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPEL------RATAQ 339 (400)
T ss_pred HHHHHHhcC-Cc--------------------HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccc------hHHHH
Confidence 777777531 00 0012223344567999999999999999999999988 99999
Q ss_pred HHHHHHH-HHHHHHHhhhhhhccccccchh------HhHHHHHHHHHHHHHHHhc
Q 008158 178 NWYYTTF-TVVILITQTVLVYIQDSVSWVI------GFGIPTVLMIGAIILFLVG 225 (575)
Q Consensus 178 ~~~~~~~-~ig~~~~~~v~~~l~~~~gw~~------~f~~~~~~~~i~~~~~~~~ 225 (575)
++++... .+|..+|..++|++.+.+|-+. .+.+.+++.++..+++++.
T Consensus 340 ~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~ 394 (400)
T PF03825_consen 340 GLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVIL 394 (400)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhh
Confidence 9988764 7999999999999998776443 4444555555555554443
No 217
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.42 E-value=3.3e-06 Score=85.07 Aligned_cols=148 Identities=12% Similarity=0.033 Sum_probs=102.3
Q ss_pred CcchhHHHHHHHHHHHHHhhhhHHHHHHHHh-----------------hhhCCChhhHHHH--HHHHHHHHHHHhhhhHH
Q 008158 15 GWKAMPYILGNETFERLATIGLLANFMVYLL-----------------KEYHMNQTSAANI--LNIWGGVTNFAPLLGAF 75 (575)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~-----------------~~l~~~~~~~~~i--~~~~~~~~~~~~~~~G~ 75 (575)
..|.-+.+....|-..+.+|+++-......+ ...+-......-. ..+..+.-+.+.++.|+
T Consensus 324 lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~ 403 (528)
T KOG0253|consen 324 LRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGV 403 (528)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHH
Confidence 3344556667888888999987654433322 2111111111111 23344566788899999
Q ss_pred HhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccc
Q 008158 76 ISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSI 155 (575)
Q Consensus 76 laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~ 155 (575)
+.|| +|||+++-.+.+++.+..+.+... ++.+. ...+++.+|+... +.+.+.+
T Consensus 404 iver-lGRKkTMal~l~~f~iflfll~~c---------------------~~rn~-~tvllf~arafis----g~fqvaY 456 (528)
T KOG0253|consen 404 IVER-LGRKKTMALSLILFGIFLFLLTTC---------------------KTRNA-YTVLLFTARAFIS----GAFQVAY 456 (528)
T ss_pred HHHH-hcchhHHHHHHHHHHHHHHHHHHh---------------------cCcch-hHHHHHHHHHHHh----chheEEE
Confidence 9999 599999988888888877776653 33333 2345667777653 3345689
Q ss_pred cccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhh
Q 008158 156 PFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVL 195 (575)
Q Consensus 156 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~ 195 (575)
.|--|.+|.+. |+.+.+....+..||+++.|.+.
T Consensus 457 vYtPEVyPTav------RatgvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 457 VYTPEVYPTAV------RATGVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred EecCcccchhh------hhcchhhhhhHHhhhhhhhhHHH
Confidence 99999999987 99999999999999999999888
No 218
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.42 E-value=1.8e-06 Score=89.93 Aligned_cols=137 Identities=14% Similarity=0.164 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHH
Q 008158 21 YILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLT 100 (575)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~ 100 (575)
......++.....+++..+++.|+++.+|+++.+.+.+.....+...++.+++|+++||+ |||+.+..+..+...+...
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~ 307 (366)
T TIGR00886 229 ILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRL-GGARKLLMSFLGVAMGAFL 307 (366)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhh-ccchhHHHHHHHHHHHHHH
Confidence 333444444455567788899999999999999999999999999999999999999995 9999888877777666665
Q ss_pred HHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHH
Q 008158 101 VTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWY 180 (575)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 180 (575)
..+... +..+....++...+.+++.|...+...++..|..|+ + ++...++.
T Consensus 308 ~~~~~~----------------------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~------~g~~~g~~ 358 (366)
T TIGR00886 308 VVLGLV----------------------SPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFRR-A------TGAVSGLV 358 (366)
T ss_pred HHhcCC----------------------CcchHHHHHHHHHHHHHHhccccchhhhcchhhchh-h------cccHHHHH
Confidence 554321 000233344444555555666666677777888763 4 89999988
Q ss_pred HHHHHHH
Q 008158 181 YTTFTVV 187 (575)
Q Consensus 181 ~~~~~ig 187 (575)
+...++|
T Consensus 359 ~~~~~~g 365 (366)
T TIGR00886 359 GAIGNLG 365 (366)
T ss_pred HHhccCC
Confidence 8777665
No 219
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.41 E-value=1.7e-05 Score=84.72 Aligned_cols=184 Identities=13% Similarity=0.087 Sum_probs=123.8
Q ss_pred CCcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHH
Q 008158 14 GGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIA 93 (575)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l 93 (575)
..++.+...+...+...+.-..........+-++-|++..++.+++........+..+++.++.||+ |||+.++.+..+
T Consensus 266 ~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~-gRRpLll~~~~~ 344 (485)
T KOG0569|consen 266 TLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRL-GRRPLLLISLSL 344 (485)
T ss_pred chhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHHH
Confidence 3444455555566666665554555556666678899999999999999999999999999999995 999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhH-HHHHHHHHHHHh-ccCCccccccccccCCCCCCccccc
Q 008158 94 AILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLG-VLVMGLGLLSIG-TGGIRPCSIPFGVDQFDATTDEGVK 171 (575)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~l~g~g-~g~~~~~~~~~~~~~~~~~~~~~~~ 171 (575)
+.+..+++.....+... ...... ..+++.++..++ .-+..|...-+.+|.+|++.
T Consensus 345 ~~~~~~~~~~~~~l~~~------------------~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~----- 401 (485)
T KOG0569|consen 345 MAVALLLMSIALFLSNS------------------FGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSA----- 401 (485)
T ss_pred HHHHHHHHHHHHHHHHH------------------hhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccc-----
Confidence 88887777665421110 000111 122333333222 22346788889999999988
Q ss_pred chhhhhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHH
Q 008158 172 GINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFL 223 (575)
Q Consensus 172 ~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~ 223 (575)
|..+.++-+...-+..++.......+.+.+|= +.|++..+...+..+..+
T Consensus 402 -R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~ 451 (485)
T KOG0569|consen 402 -RSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLY 451 (485)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHH
Confidence 99999998888777777766666667776663 445544444333333333
No 220
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.39 E-value=2.3e-06 Score=92.96 Aligned_cols=186 Identities=8% Similarity=0.014 Sum_probs=129.8
Q ss_pred hhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhh----HHHHHHHHHHHHHHHhhhhH----HHhhhcccchHH--H
Q 008158 18 AMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTS----AANILNIWGGVTNFAPLLGA----FISDTYIGRFKT--I 87 (575)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~----~~~i~~~~~~~~~~~~~~~G----~laD~~~Grr~~--~ 87 (575)
.+..+++...+-+..+....+.++.|.++..|.+... .+++.+.-.+...+.+++.. ++.||..+.+.. +
T Consensus 273 ~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~ 352 (475)
T TIGR00924 273 AYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKF 352 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHH
Confidence 3444455555666666667777888887765544222 66777777777777766644 445542122333 3
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCc
Q 008158 88 TFASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTD 167 (575)
Q Consensus 88 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~ 167 (575)
.+|.++..++....+++..... .....+.+++++..++.++|.....|...+++++..|++.
T Consensus 353 ~~G~~l~~~~~~~~~~~~~~~~-----------------~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~- 414 (475)
T TIGR00924 353 TLGMLFCGASFLTFAASIWFAD-----------------AGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRL- 414 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhhcC-----------------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHH-
Confidence 6788888888777776421110 0112377889999999999999999999999999999877
Q ss_pred ccccchhhhhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhcc
Q 008158 168 EGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGK 226 (575)
Q Consensus 168 ~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~ 226 (575)
|++.++.++....+|..+++.+.....+..+|...|...++..++..+++++..
T Consensus 415 -----~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (475)
T TIGR00924 415 -----MGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMV 468 (475)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998888766666788777766665555555444433
No 221
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.33 E-value=2e-05 Score=83.32 Aligned_cols=138 Identities=10% Similarity=0.079 Sum_probs=97.9
Q ss_pred HHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 008158 37 LANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCD 116 (575)
Q Consensus 37 ~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 116 (575)
....+.|+++.+|.+..+.+++.....++..++.++.+++.||+ ||+... +.....++.+.........
T Consensus 227 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~-------- 295 (394)
T PRK11652 227 EACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRF-STLMWQ--SVICCLLAGLLMWIPGWFG-------- 295 (394)
T ss_pred HHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH--HHHHHHHHHHHHHHHHHhc--------
Confidence 34556788878999999999998888888889999999999995 743322 2222222222221111000
Q ss_pred CCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhh
Q 008158 117 VAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLV 196 (575)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~ 196 (575)
..+.+.+....++.++|.+...|...++..|.+|+ + ++...+..+...++|..+++.+++
T Consensus 296 -------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~------~g~~~~~~~~~~~lg~~~~~~~~~ 355 (394)
T PRK11652 296 -------------VMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPY-L------AGTAGALLGGLQNIGSGLAALLSA 355 (394)
T ss_pred -------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-c------chHHHHHHHHHHHHHHHHHHHHHH
Confidence 01344567777888999999999999988888874 3 688899999889999999999999
Q ss_pred hccccccch
Q 008158 197 YIQDSVSWV 205 (575)
Q Consensus 197 ~l~~~~gw~ 205 (575)
++.+...+.
T Consensus 356 ~~~~~~~~~ 364 (394)
T PRK11652 356 MLPQTGQFS 364 (394)
T ss_pred HccCCchHH
Confidence 887654443
No 222
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.29 E-value=1.5e-05 Score=79.13 Aligned_cols=146 Identities=17% Similarity=0.217 Sum_probs=111.0
Q ss_pred HHHHHhhhhCCCh--hhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 008158 40 FMVYLLKEYHMNQ--TSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDV 117 (575)
Q Consensus 40 l~~yl~~~l~~~~--~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 117 (575)
....+..+++.+. ...+++.+.+.+...++.++.|.++||+ |||+.+..+.....++.+...+..+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~----------- 91 (338)
T COG0477 24 ALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRY-GRRKVLIIGLLLFLLGTLLLALAPN----------- 91 (338)
T ss_pred HHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccc-cchHHHHHHHHHHHHHHHHHHhCcc-----------
Confidence 3344444555454 5789999999999999999999999996 9998888888776666555555431
Q ss_pred CCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHH-HHHHHHHHHhhhhh
Q 008158 118 AKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYT-TFTVVILITQTVLV 196 (575)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~ig~~~~~~v~~ 196 (575)
.....+.+.|...|++.+...+...+++.|.+|+ . .+|+...+.... ...+|..+++.+++
T Consensus 92 -------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (338)
T COG0477 92 -------------VGLALLLILRLLQGLGGGGLLPVASALLSEWFPE-A----TERGLAVGLVTLGAGALGLALGPLLAG 153 (338)
T ss_pred -------------chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCc-h----hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1467789999999999999999999999999986 1 238888888888 57888888887777
Q ss_pred hcccc--ccchhHhHHHHHHH
Q 008158 197 YIQDS--VSWVIGFGIPTVLM 215 (575)
Q Consensus 197 ~l~~~--~gw~~~f~~~~~~~ 215 (575)
.+... .+|++.|.+.....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~ 174 (338)
T COG0477 154 LLLGALLWGWRAAFLLAALLG 174 (338)
T ss_pred HHHHHHhcchHHHHHHHHHHH
Confidence 66543 57888666555443
No 223
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.24 E-value=3.1e-05 Score=75.96 Aligned_cols=160 Identities=10% Similarity=0.081 Sum_probs=110.8
Q ss_pred HHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 008158 37 LANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCD 116 (575)
Q Consensus 37 ~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 116 (575)
.....+.+++.+|+|++|...+...-.++..++ ++.|.+.|++ |.+.++.+|.+...+|..++..+.+-..
T Consensus 21 Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~-gp~~~l~iG~~~~~~GY~~~~l~~~~~i------- 91 (250)
T PF06813_consen 21 FSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRF-GPWVVLLIGAVLGFVGYGLLWLAVSGRI------- 91 (250)
T ss_pred hhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHhCcc-------
Confidence 345568899999999999999999999999875 7789999995 9999999999999999988877542110
Q ss_pred CCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhh
Q 008158 117 VAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLV 196 (575)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~ 196 (575)
.....+.+.+..++.|.+.+.+.........+.||+ + ||.+.++.-....+++.+-..+..
T Consensus 92 ------------~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~------RG~vvgilk~~~GLSaai~t~i~~ 152 (250)
T PF06813_consen 92 ------------PSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-S------RGTVVGILKGFFGLSAAIFTQIYS 152 (250)
T ss_pred ------------CccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-c------cCceehhhhHHHHhHHHHHHHHHH
Confidence 011456677777777777766666666666788884 4 899999977777666666554443
Q ss_pred hccccccchhHhHHHHHHHHHHHHHHHh
Q 008158 197 YIQDSVSWVIGFGIPTVLMIGAIILFLV 224 (575)
Q Consensus 197 ~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 224 (575)
.+.+.-.-...+.+.....++.++..++
T Consensus 153 ~~f~~~~~~fll~la~~~~~v~l~~~~~ 180 (250)
T PF06813_consen 153 AFFGDDPSSFLLFLAVLPAVVCLVAMFF 180 (250)
T ss_pred HHcCCChHHHHHHHHHHHHHHHHHHhhh
Confidence 3333222233333333334444444343
No 224
>PRK11462 putative transporter; Provisional
Probab=98.21 E-value=2.2e-05 Score=85.03 Aligned_cols=128 Identities=7% Similarity=-0.011 Sum_probs=84.0
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcch
Q 008158 52 QTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSM 131 (575)
Q Consensus 52 ~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (575)
+...+.+...+.++..++.+++++++||+ |+|+++..+..+..+..++..+... .
T Consensus 262 ~~~~~~~l~~~~i~~iig~~l~~~l~~r~-gkk~~~~~~~~~~~~~~~~~~~~~~------------------------~ 316 (460)
T PRK11462 262 PEVFVAFLTTYCVGNLIGSALAKPLTDWK-CKVTIFWWTNALLAVISLAMFFVPM------------------------Q 316 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHhch------------------------h
Confidence 34455667778888889999999999995 9998877555544443333322210 0
Q ss_pred hhHHHHHHHHHHHHhccCCccccccccccCCCCCCc-ccccchhhhhHHHHHHHHHHHHHHhhhhhhccccccc
Q 008158 132 QLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTD-EGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSW 204 (575)
Q Consensus 132 ~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~-~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw 204 (575)
+...+++..++.|++.+...+...++.+|..+.+|- .++++-+..++...+...+|..+++.++|++.+..|+
T Consensus 317 ~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 317 ASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 222334445667888777777778888888775432 2233345557777788899999999888876554444
No 225
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.20 E-value=0.00043 Score=72.31 Aligned_cols=62 Identities=11% Similarity=0.130 Sum_probs=52.8
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008158 445 SVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVH 506 (575)
Q Consensus 445 ~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~ 506 (575)
+.|.+.+.++..|+..+..+...+..+.+..|++.|..++|.......+|..+++.+.-++.
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 56666666777899999999999999999999999999999999999999988887765543
No 226
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.20 E-value=7.3e-07 Score=92.56 Aligned_cols=145 Identities=14% Similarity=0.201 Sum_probs=111.4
Q ss_pred cccchhHhhHhhhhcccchhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHhHhhhhcccccCCCccchhHHHHH
Q 008158 372 VGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAP 451 (575)
Q Consensus 372 ~~~i~~~~~~i~~~~~~~~~~~~~~r~~~r~~~~~~~~~i~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 451 (575)
++....+.-+++.|+.+. +.+|.+|+ +.+++|.++..++.+..+.. .+.|.+++
T Consensus 73 l~~vf~v~~~i~sPl~gy----LadryNR~-------~v~~vG~~iW~~Av~~~~fs---------------~~Fwq~~l 126 (493)
T KOG1330|consen 73 LQTVFIVVFMIASPLFGY----LADRYNRK-------RVIAVGIFIWTLAVFASGFS---------------NHFWQVLL 126 (493)
T ss_pred hhHHHHHHHHHHHHHHHH----HHhhcCcc-------eEEeeHHHHHHHHHHHHHHH---------------HHHHHHHH
Confidence 344444555556665433 36665444 66899999999888887765 36778888
Q ss_pred HHHHHHHHHHHHhhhhHHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCCCCcchhHHHH
Q 008158 452 QLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFY 531 (575)
Q Consensus 452 ~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f 531 (575)
.-.+.|+||+...|....++.|.+|.+.|++..+++++....|..+|..+...+...+ ..| ++.|
T Consensus 127 ~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~-----~~W----------r~af 191 (493)
T KOG1330|consen 127 CRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLT-----FWW----------RWAF 191 (493)
T ss_pred HHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCc-----cce----------EEEE
Confidence 8899999999999999999999999999999999999999999999887777665543 125 5788
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccc
Q 008158 532 FLIAGLGGLNIVYFLYCARRYRYKSG 557 (575)
Q Consensus 532 ~~~a~i~~v~~i~~~~~~~~~~~~~~ 557 (575)
.+.+++.++..++..++.++-+++.+
T Consensus 192 ~~~avl~vi~~~L~~~f~~eP~rga~ 217 (493)
T KOG1330|consen 192 RGSAVLGVIVGLLVFLFVREPERGAR 217 (493)
T ss_pred EeehHHHHHHHHHHHhhccCcccccc
Confidence 88999999888887777666554433
No 227
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.18 E-value=3.6e-05 Score=82.15 Aligned_cols=169 Identities=14% Similarity=0.033 Sum_probs=107.7
Q ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHH
Q 008158 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGM 98 (575)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~ 98 (575)
++......++....+++.....|.++++.+|++..+.++.......+..++..+.+.+.++. ++++.......+..++.
T Consensus 220 ~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~-~~~~~~~~~~~~~~ig~ 298 (413)
T PRK15403 220 FLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDP-TEPRFIWRAVPIQLVGL 298 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CchhHHHHHHHHHHHHH
Confidence 33333444455555566667778899999999999999998888888888777777766543 45454433444444444
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhH
Q 008158 99 LTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFN 178 (575)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 178 (575)
.+........ ..+....++..++.++|.+...|+..+.. +.+.+.+ ++++.+
T Consensus 299 ~l~~~~~~~~---------------------~~~~~~~~~~~~l~~~G~~~~~p~~~~~a--l~~~~~~-----~G~a~a 350 (413)
T PRK15403 299 ALLIVGNLLW---------------------PHVWLWSVLGTSLYAFGIGLIFPTLFRFT--LFSNNLP-----KGTVSA 350 (413)
T ss_pred HHHHHHHHHc---------------------cccHHHHHHHHHHHHHHHHHHhHHHHHHH--hccCCCC-----CcHHHH
Confidence 4443321000 00233356777888899888888777432 2222221 688888
Q ss_pred HHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHH
Q 008158 179 WYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIG 217 (575)
Q Consensus 179 ~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i 217 (575)
.++.....+...++.+++++... +-++.|....++..+
T Consensus 351 ~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~ 388 (413)
T PRK15403 351 SLNMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVAGV 388 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHHH
Confidence 88888888888888888888664 556667655544433
No 228
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.16 E-value=0.00021 Score=72.51 Aligned_cols=158 Identities=16% Similarity=0.109 Sum_probs=92.7
Q ss_pred cCCCcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHH--HHhhhhHHHhh-----hcccch
Q 008158 12 KPGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTN--FAPLLGAFISD-----TYIGRF 84 (575)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~--~~~~~~G~laD-----~~~Grr 84 (575)
.+...+.++.++.......+. +|+.. ..+++-+.-|.|-++.+. +.+... ..-+.+.++.| | +|||
T Consensus 26 ~~~d~~~illLl~LYllQGiP-~GL~~-~iP~lL~ak~vSyt~~a~----fS~ay~P~sLKllWaPiVDs~y~k~-~Grr 98 (510)
T KOG3574|consen 26 LKGDRSSILLLLFLYLLQGIP-LGLIG-AIPLLLQAKGVSYTSQAI----FSFAYWPFSLKLLWAPIVDSVYSKR-FGRR 98 (510)
T ss_pred hhhhhhhHHHHHHHHHHcCCc-hhHhh-hhHHHhcCCCcchhhhhh----hhhhhhHHHHHHHHHhhhHHHHHHh-hccc
Confidence 345556777777777776665 67777 555555577777777543 333333 34467889999 8 5999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCC
Q 008158 85 KTITFASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDA 164 (575)
Q Consensus 85 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 164 (575)
|.-++= .-+.+|.++..++..++...++ ++..+ +...+....+++-+.++.--.+.-...-.+..+
T Consensus 99 ksWvvp-~q~llG~~mllLs~~v~~~~g~------------ng~~p-~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~ 164 (510)
T KOG3574|consen 99 KSWVVP-CQYLLGLFMLLLSYLVDRGLGG------------NGGLP-NVVALTLLFLLLNFLAATQDIAVDGWALTMLSR 164 (510)
T ss_pred cceeee-hHHHHHHHHHHHhhCCCccccc------------CCCCc-chHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCH
Confidence 965432 2334555555555544432111 11111 222233344455555555445555555556666
Q ss_pred CCcccccchhhhhHHHHHHHHHHHHHHhhhhh
Q 008158 165 TTDEGVKGINSFFNWYYTTFTVVILITQTVLV 196 (575)
Q Consensus 165 ~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~ 196 (575)
++ .+-+......+.+.|.+++..+.-
T Consensus 165 e~------lgyaST~q~Vg~~~GyfL~~~ifL 190 (510)
T KOG3574|consen 165 EN------LGYASTCQSVGQTAGYFLGNVVFL 190 (510)
T ss_pred hh------cCchhHHHHHHHhhhHHhhcceee
Confidence 66 788888888888888888876643
No 229
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.16 E-value=1.3e-05 Score=84.14 Aligned_cols=157 Identities=9% Similarity=0.124 Sum_probs=122.6
Q ss_pred hhHHHHHHHHhhhhC---CChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 008158 35 GLLANFMVYLLKEYH---MNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLH 111 (575)
Q Consensus 35 ~~~~~l~~yl~~~l~---~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~ 111 (575)
..-..++.|.+..++ .++...|.+.+.-.+.-.+.-.+..++.+| +|.|+.++++..+..+=..++++++
T Consensus 238 vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~r-ig~k~~Lllag~i~~iRi~~~~~~~------ 310 (412)
T PF01306_consen 238 VFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINR-IGAKNLLLLAGVIMAIRIIGSGFAT------ 310 (412)
T ss_dssp HHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHHHT--------
T ss_pred HHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHh-cChHhHHHHHHHHHHHHHHHHhhhc------
Confidence 333457788876554 344557777777778888888899999999 5999999999999998888888876
Q ss_pred CCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHH-HHHHHHHHHH
Q 008158 112 PPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWY-YTTFTVVILI 190 (575)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~ig~~~ 190 (575)
+.+.+.+.+.++|+-.+.......-|+++.+|++. .++.+.+. +....+|..+
T Consensus 311 --------------------~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rl------sAt~y~v~~~~~~~~~~~i 364 (412)
T PF01306_consen 311 --------------------NPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRL------SATLYLVGFQFAKQIGIII 364 (412)
T ss_dssp --------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGG------HHHHHHHHHTTTHHHHHHH
T ss_pred --------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhH------HHHHHHHHHHHHHHHHHHH
Confidence 67789999999999999999999999999999755 66777764 5667999999
Q ss_pred HhhhhhhccccccchhHhHHHHHHHHHHHHHHHh
Q 008158 191 TQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLV 224 (575)
Q Consensus 191 ~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 224 (575)
.+.++|++.|..|++..|++-+.+.+...++..+
T Consensus 365 ~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f 398 (412)
T PF01306_consen 365 LSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAF 398 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHhee
Confidence 9999999999999999998766555544444333
No 230
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.09 E-value=5.4e-06 Score=84.52 Aligned_cols=162 Identities=13% Similarity=0.039 Sum_probs=118.9
Q ss_pred hHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhccc--chHHHHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 008158 36 LLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIG--RFKTITFASIAAILGMLTVTLTAWLPQLHPP 113 (575)
Q Consensus 36 ~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~G--rr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 113 (575)
+-..++.+..+.+..+.-+.|....-..+...++..+.|.++||+ + |-..-..++++..+.+....+++
T Consensus 289 LePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~-~~~~wl~~~~gl~~~G~~~~~iP~~~-------- 359 (464)
T KOG3764|consen 289 LEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKY-PHLRWLLSLGGLATVGVSSGPIPFAT-------- 359 (464)
T ss_pred hCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhc-CchhHHHHHHHHHHHHHHhchhHhhh--------
Confidence 345677888888885555899888889999999999999999996 9 43333333333333333344443
Q ss_pred CCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhh
Q 008158 114 KCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQT 193 (575)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~ 193 (575)
+...+++-++..+++.+..-+...+......+..+.++-+..|..+++...+..+|..+||.
T Consensus 360 ------------------~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~ 421 (464)
T KOG3764|consen 360 ------------------SIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPT 421 (464)
T ss_pred ------------------hHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhcccc
Confidence 55667777888888888877777777777777665443446899999999999999999999
Q ss_pred hhhhccccccchhHhHHHHHHHHHHHHHHHh
Q 008158 194 VLVYIQDSVSWVIGFGIPTVLMIGAIILFLV 224 (575)
Q Consensus 194 v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 224 (575)
++|++.+.+|++|.-.+.++..++-.-++.+
T Consensus 422 ~gg~iv~~iGF~wl~~iig~~n~iyapvl~l 452 (464)
T KOG3764|consen 422 FGGSLVEAIGFEWLMTIIGILNLIYAPVLLL 452 (464)
T ss_pred ccchheeehhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998877666554444444333
No 231
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.04 E-value=0.00014 Score=70.46 Aligned_cols=90 Identities=18% Similarity=0.175 Sum_probs=67.0
Q ss_pred HHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCC
Q 008158 41 MVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDVAKP 120 (575)
Q Consensus 41 ~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (575)
..|+-+.+++...+.+.+.-.......++..+.|-|+||- |||+.-.. +.+..+++.+...-|
T Consensus 60 vYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkq-GRKracvt----ycitYiLsCiTKhSp------------ 122 (454)
T KOG4332|consen 60 VYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVT----YCITYILSCITKHSP------------ 122 (454)
T ss_pred eeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhh-ccccceee----ehHHHHHHHHhhcCC------------
Confidence 3556678899999999887777777788888889999995 99997654 444445555554322
Q ss_pred CCCccCCCcchhhHHHHHHHHHHHHhccCCcccccccc
Q 008158 121 PFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFG 158 (575)
Q Consensus 121 ~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~ 158 (575)
++-+++++|.+.|+..+..+++.-+..
T Consensus 123 -----------qYkVLmVGR~LGGiaTsLLFSaFEsWl 149 (454)
T KOG4332|consen 123 -----------QYKVLMVGRVLGGIATSLLFSAFESWL 149 (454)
T ss_pred -----------ceEEEeehhhhhhHHHHHHHHHHHHHH
Confidence 556699999999999998877666543
No 232
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.02 E-value=9.8e-06 Score=84.09 Aligned_cols=167 Identities=11% Similarity=0.030 Sum_probs=116.1
Q ss_pred chhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhc---ccchHHHHHHHHH
Q 008158 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTY---IGRFKTITFASIA 93 (575)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~---~Grr~~~~~~~~l 93 (575)
+.+..+....+-..+++-.=.+++++|++ ++|.+..-.+.+-...-+...+.+|+.|..+||. +||||.++....+
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~-~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQ-SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHH-HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 44444444444444554444567778876 7888888788777777788888999999999986 6888876665554
Q ss_pred -HHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccc
Q 008158 94 -AILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKG 172 (575)
Q Consensus 94 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 172 (575)
..++.++...++++.-+..+..+. | ..+....+++++..+.=++.-..+...-++.+|....++.
T Consensus 111 ~i~~~l~Lig~aaDig~~lgd~~~~-------~--~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~----- 176 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLLLGDNERK-------P--VKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAK----- 176 (498)
T ss_pred HHHHHHhhhhhHhhhhHHhcCCccc-------c--cchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhh-----
Confidence 557888888877655322211111 0 1233566677777777788877888889999999865441
Q ss_pred hhhhhHHHHHHHHHHHHHHhhhhhhc
Q 008158 173 INSFFNWYYTTFTVVILITQTVLVYI 198 (575)
Q Consensus 173 r~~~~~~~~~~~~ig~~~~~~v~~~l 198 (575)
+.++.+++.....+|..+|+.++++.
T Consensus 177 ~~~Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 177 KTRANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred hhccchhHHHHHHhcceeeeeccccc
Confidence 22399999999999999999888754
No 233
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.01 E-value=0.00017 Score=74.70 Aligned_cols=155 Identities=18% Similarity=0.281 Sum_probs=127.1
Q ss_pred HHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 008158 39 NFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDVA 118 (575)
Q Consensus 39 ~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (575)
.+=+|-.+-||++..+...++..+..+..++-...|++..|..+++++-.+++.+.+++.....++...
T Consensus 230 iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~----------- 298 (403)
T PF03209_consen 230 ILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPL----------- 298 (403)
T ss_pred HcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhc-----------
Confidence 444677778999999999999999999999999999998865788888889999988887777766531
Q ss_pred CCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhhhc
Q 008158 119 KPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYI 198 (575)
Q Consensus 119 ~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l 198 (575)
.+.+.+..+.++.|+|.|.+.....+...|...+++ .|..++.+.....++..++..++|.+
T Consensus 299 ------------~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~------aG~~mG~WGaaQA~A~Glg~~~GG~~ 360 (403)
T PF03209_consen 299 ------------GSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGR------AGLFMGAWGAAQAIARGLGTFLGGAL 360 (403)
T ss_pred ------------ccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcc------hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 256778999999999999999999999999998776 78999999999999999998888866
Q ss_pred cc----------cccchhHhHHHHHHHHHHHHHH
Q 008158 199 QD----------SVSWVIGFGIPTVLMIGAIILF 222 (575)
Q Consensus 199 ~~----------~~gw~~~f~~~~~~~~i~~~~~ 222 (575)
.| ..+|..+|.+.++..++++.+.
T Consensus 361 ~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 361 RDLVRALFGNSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred HHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 43 2356677777776666555543
No 234
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.01 E-value=3.6e-05 Score=83.95 Aligned_cols=149 Identities=11% Similarity=0.075 Sum_probs=104.8
Q ss_pred HHHHHHHhhhhHHHHHHHHhhhhCCCh----hhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHH-------HHHHHHHH
Q 008158 26 ETFERLATIGLLANFMVYLLKEYHMNQ----TSAANILNIWGGVTNFAPLLGAFISDTYIGRFKT-------ITFASIAA 94 (575)
Q Consensus 26 ~~~~~~~~~~~~~~l~~yl~~~l~~~~----~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~-------~~~~~~l~ 94 (575)
..+....+......++.|.++..+.+. -..+++.+...+...+..++.|++.||+ |||+. +.+|+++.
T Consensus 278 ~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl-~~r~~~~~~~~k~~~G~~l~ 356 (489)
T PRK10207 278 AVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHL-GSKGKDLSMPMKFTLGMFLC 356 (489)
T ss_pred HHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHH-hhCCCCCCcHHHHHHHHHHH
Confidence 444445555566777788775333221 1234555555566767778889999995 98873 77788887
Q ss_pred HHHHHHHHHHhh-cCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccch
Q 008158 95 ILGMLTVTLTAW-LPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGI 173 (575)
Q Consensus 95 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 173 (575)
.++.+..+.... .... ....+.++++..-++.|+|.++..|...+++.+..|++. +
T Consensus 357 ~~~~~~~~~~~~~~~~~-----------------~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~------~ 413 (489)
T PRK10207 357 SLGFLTAAAAGMWFADA-----------------QGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHL------M 413 (489)
T ss_pred HHHHHHHHHHHHhhcCC-----------------CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHH------H
Confidence 777665443210 0000 011246677788889999999999999999999999877 9
Q ss_pred hhhhHHHHHHHHHHHHHHhhhhhhc
Q 008158 174 NSFFNWYYTTFTVVILITQTVLVYI 198 (575)
Q Consensus 174 ~~~~~~~~~~~~ig~~~~~~v~~~l 198 (575)
+.+++.++...++|..+|..++.+.
T Consensus 414 g~~~g~~~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 414 GFILGMWFLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999998887654
No 235
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.93 E-value=0.0001 Score=80.73 Aligned_cols=168 Identities=11% Similarity=0.021 Sum_probs=110.7
Q ss_pred HHHHHhhhhHHHHHHHHhh--hhCCCh------hhHHHHHHHHHHHHHHHhhhh----HHHhhhcccchHHHHHHHHHHH
Q 008158 28 FERLATIGLLANFMVYLLK--EYHMNQ------TSAANILNIWGGVTNFAPLLG----AFISDTYIGRFKTITFASIAAI 95 (575)
Q Consensus 28 ~~~~~~~~~~~~l~~yl~~--~l~~~~------~~~~~i~~~~~~~~~~~~~~~----G~laD~~~Grr~~~~~~~~l~~ 95 (575)
+....+|.+...++.++.. ..+.+. ...+++.++-.+...++.++. +++.||+ +..+.+.+|+++..
T Consensus 283 ~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~-~~~~~~~~G~~l~~ 361 (500)
T PRK09584 283 LEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRL-PMPHKFAIGMVLCS 361 (500)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCC-CcHHHHHHHHHHHH
Confidence 4445556666666666543 111211 125555666665555665555 5666663 66788889999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhh
Q 008158 96 LGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINS 175 (575)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 175 (575)
++.+..+.....+. .| +..+.+++++..++.|+|+++..|...+++.+..|++. |++
T Consensus 362 l~f~~l~~~~~~~~--------------~~---~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~------rg~ 418 (500)
T PRK09584 362 GAFLVLPLGAKFAN--------------DA---GIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRL------MGF 418 (500)
T ss_pred HHHHHHHHHHHhcC--------------CC---CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHH------HHH
Confidence 99888877653211 00 12245678999999999999999999999999999877 999
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhccc----------cccchhHhHHHHHHHHHHH
Q 008158 176 FFNWYYTTFTVVILITQTVLVYIQD----------SVSWVIGFGIPTVLMIGAI 219 (575)
Q Consensus 176 ~~~~~~~~~~ig~~~~~~v~~~l~~----------~~gw~~~f~~~~~~~~i~~ 219 (575)
.++.++....+|..++..+.+.... ..++.+.|...++..++..
T Consensus 419 ~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a 472 (500)
T PRK09584 419 IMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIA 472 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHH
Confidence 9999888777777777666543210 1135667766555444333
No 236
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.88 E-value=9.6e-05 Score=58.63 Aligned_cols=67 Identities=22% Similarity=0.242 Sum_probs=54.2
Q ss_pred HHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHH
Q 008158 26 ETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAA 94 (575)
Q Consensus 26 ~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~ 94 (575)
.++-..+.-.+.++++.|++ +.|+|..+.|.+.++..+...++++++|+++||+ ||++.++....++
T Consensus 9 yf~~f~~~g~~~Pfl~~~~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~-~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 9 YFFYFAALGCLYPFLPLYLK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKF-GKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHhhhhHhhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CccHHHHHHHHHH
Confidence 33443444456778888888 5999999999999999999999999999999995 9888877665543
No 237
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=97.88 E-value=0.00022 Score=76.98 Aligned_cols=201 Identities=9% Similarity=-0.032 Sum_probs=137.5
Q ss_pred CcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhh-hCCChh------h----HHHHHHHHHHHHHHHhhhhHHHhhhcccc
Q 008158 15 GWKAMPYILGNETFERLATIGLLANFMVYLLKE-YHMNQT------S----AANILNIWGGVTNFAPLLGAFISDTYIGR 83 (575)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-l~~~~~------~----~~~i~~~~~~~~~~~~~~~G~laD~~~Gr 83 (575)
.+|.+..+...+++.+++++....+.+.|+.++ +|-++. + ..+....+.+...+.+++--++.+| +|+
T Consensus 256 mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~-~g~ 334 (477)
T TIGR01301 256 LPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRG-WGA 334 (477)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcc
Confidence 447788888999999999999999999998864 443221 1 2233444555555666677788999 595
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHhhcCC-C--CCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccc
Q 008158 84 -FKTITFASIAAILGMLTVTLTAWLPQ-L--HPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGV 159 (575)
Q Consensus 84 -r~~~~~~~~l~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~ 159 (575)
|++...+.++..+++....+.++.++ . .+++-+. ..++....+..++...+.|+..+......+++++
T Consensus 335 ~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s 406 (477)
T TIGR01301 335 GKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGES--------LPPPTGIKASALIVFAILGIPLAITYSIPFALAS 406 (477)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccc--------cCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHH
Confidence 67778888888888887776543211 0 0000000 0001112355667778899999999999999999
Q ss_pred cCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhhhcccccc--chhHhHHHHHHHHHHHHHHHhccce
Q 008158 160 DQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVS--WVIGFGIPTVLMIGAIILFLVGKKL 228 (575)
Q Consensus 160 ~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~g--w~~~f~~~~~~~~i~~~~~~~~~~~ 228 (575)
+..+++. ++.|..+++.+.+..+...+.....|.+.+..| -.+.+.+.++..+++.+..++..|+
T Consensus 407 ~~~~~~~----~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~ 473 (477)
T TIGR01301 407 IRSSNLG----AGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPR 473 (477)
T ss_pred HHccccC----CCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCC
Confidence 9998543 346999999999999999998877777554443 4467777888877777776665553
No 238
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.83 E-value=2.8e-05 Score=84.33 Aligned_cols=136 Identities=5% Similarity=-0.198 Sum_probs=106.5
Q ss_pred hhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCc
Q 008158 45 LKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQ 124 (575)
Q Consensus 45 ~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (575)
.+.+|+++.+.|.+.....++..++....+++.+| ++.|+++.++.++.+++.....+..+-+....
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~-~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~------------ 346 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKT-FPYRLLFGVTTLLYTLSSLFDLILVKRWNLAF------------ 346 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhh-CCHHHHHHHHHHHHHHHHhCceeeeecccccc------------
Confidence 45789999999999999999999999999999999 59999999999998887766432211110000
Q ss_pred cCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhhhcccccc
Q 008158 125 CKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVS 203 (575)
Q Consensus 125 ~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~g 203 (575)
+......+...-++.+++.+........++.+..|++. +++.++++....++|..+++.+++++.+..|
T Consensus 347 ----gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~------egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 347 ----GISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGC------ESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred ----CCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCc------eehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 00012234445567788888878888999999999887 8999999999999999999999999988766
No 239
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.82 E-value=0.0029 Score=66.28 Aligned_cols=156 Identities=12% Similarity=0.067 Sum_probs=110.8
Q ss_pred HHHHHHHHhhh-hCCChhhHHH-HHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 008158 37 LANFMVYLLKE-YHMNQTSAAN-ILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPK 114 (575)
Q Consensus 37 ~~~l~~yl~~~-l~~~~~~~~~-i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 114 (575)
-+++.+|+.+. .|++..|... +.-+..=......++...+.|. +|.|++++.+.+..++...++.+.+
T Consensus 23 EPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~-l~Ykpviil~~~~~i~t~~lll~~~--------- 92 (412)
T PF01770_consen 23 EPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDY-LRYKPVIILQALSYIITWLLLLFGT--------- 92 (412)
T ss_pred CccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHHHHHHHC---------
Confidence 45788999887 8999888764 3334444455566777899999 5999999999988888888877765
Q ss_pred CCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhh
Q 008158 115 CDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTV 194 (575)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v 194 (575)
+...+-+.-+.-|++.+. ..+..+++-...|+++ ..++.++...+.-+|-.++..+
T Consensus 93 -----------------sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~------yq~vts~~raa~l~g~~~s~~l 148 (412)
T PF01770_consen 93 -----------------SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEH------YQKVTSYTRAATLVGRFISSLL 148 (412)
T ss_pred -----------------cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 566677777888888776 3445666666667655 6777777777777777777666
Q ss_pred hhhccc--cccchhHhHHHHHHHHHHHHHHHhcc
Q 008158 195 LVYIQD--SVSWVIGFGIPTVLMIGAIILFLVGK 226 (575)
Q Consensus 195 ~~~l~~--~~gw~~~f~~~~~~~~i~~~~~~~~~ 226 (575)
+-.+.. ..+++...+++.....+++++.+++.
T Consensus 149 gQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP 182 (412)
T PF01770_consen 149 GQLLVSFGGVSYFQLNYISLASVSLALLIALFLP 182 (412)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 554443 34577777777776666666655543
No 240
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.72 E-value=0.018 Score=62.03 Aligned_cols=170 Identities=8% Similarity=-0.042 Sum_probs=98.8
Q ss_pred CcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCC-----hhhHHHHHHHHHHHHHHH-hhhhHHHhhhcccchHHHH
Q 008158 15 GWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMN-----QTSAANILNIWGGVTNFA-PLLGAFISDTYIGRFKTIT 88 (575)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~-----~~~~~~i~~~~~~~~~~~-~~~~G~laD~~~Grr~~~~ 88 (575)
-+|........-||-.+.++.+.. +++.+..+ .....++.....+...+. .++-+++++|+ +|++.+-
T Consensus 5 E~~k~~~~~l~fF~il~~Y~iLR~-----lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~-~~~~lf~ 78 (472)
T TIGR00769 5 ELKKFLPLFLMFFCILFNYTILRD-----TKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNIL-SKEALFY 78 (472)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHh-----hhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHhHH
Confidence 345555555555555555554443 67777663 246777776666655554 77789999995 9999888
Q ss_pred HHHHHHHHHHHHHHHHhh-cCCCCCCCC--CC---CCCCCCccCC--CcchhhHHHHHHHHHHHHhccCCcc-ccccccc
Q 008158 89 FASIAAILGMLTVTLTAW-LPQLHPPKC--DV---AKPPFGQCKS--ANSMQLGVLVMGLGLLSIGTGGIRP-CSIPFGV 159 (575)
Q Consensus 89 ~~~~l~~~~~~~~~~~~~-~~~~~~~~~--~~---~~~~~~~~~~--~~~~~~~~l~~~~~l~g~g~g~~~~-~~~~~~~ 159 (575)
.....+..-..++++.-- .+...+|+. |- ..+++....- -+.+....+++. ..+-.....+ .-.++..
T Consensus 79 ~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~---~elw~~~vvS~lFW~fan 155 (472)
T TIGR00769 79 TVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVM---AELWGSVVLSLLFWGFAN 155 (472)
T ss_pred HHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHH---HHHHHHHHHHHHHHHHHH
Confidence 777766665555554311 111111110 10 0010000000 001111122222 2232223333 6788999
Q ss_pred cCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhhhcc
Q 008158 160 DQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQ 199 (575)
Q Consensus 160 ~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~ 199 (575)
|.+..+| -.|.++.++.+.|+|.++++.+..++.
T Consensus 156 di~t~~q------akRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 156 QITTIDE------AKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred hcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999877 899999999999999999998888765
No 241
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.72 E-value=0.00014 Score=78.70 Aligned_cols=162 Identities=11% Similarity=-0.005 Sum_probs=103.4
Q ss_pred hhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhc---ccchHHHHHHHHHH
Q 008158 18 AMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTY---IGRFKTITFASIAA 94 (575)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~---~Grr~~~~~~~~l~ 94 (575)
.++......++....-|+...+++.|+++..|+|..+++.+...+.++..++.+++|+++||. +.+|..+.....++
T Consensus 274 ~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~ 353 (495)
T KOG2533|consen 274 GVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLY 353 (495)
T ss_pred hHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 355666788888888899999999999997789999999999999999999999999999992 25665555555544
Q ss_pred H-HHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccch
Q 008158 95 I-LGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGI 173 (575)
Q Consensus 95 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 173 (575)
. +|.+...... .......+......+.+...++......+....+. +|
T Consensus 354 ~~~g~~~l~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~-----k~ 402 (495)
T KOG2533|consen 354 AIIGAISLLAAA--------------------------VLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNT-----KA 402 (495)
T ss_pred HHHHHHHHHhhc--------------------------cchHHhHHHHhcchhhHHHHHHHHhhccccccchH-----Hh
Confidence 4 3323333322 11112222222333344444455555555554433 35
Q ss_pred hhhhHHHHHHHHHHHH-HHhhhhhhccccccchhHhHH
Q 008158 174 NSFFNWYYTTFTVVIL-ITQTVLVYIQDSVSWVIGFGI 210 (575)
Q Consensus 174 ~~~~~~~~~~~~ig~~-~~~~v~~~l~~~~gw~~~f~~ 210 (575)
-...+.+..+.+.+.. .+++.-+.....++|...|..
T Consensus 403 ~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~ 440 (495)
T KOG2533|consen 403 LTTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYM 440 (495)
T ss_pred HHHHhhhhcchhHHHHhhhhhcccccCcchhhhhHHHH
Confidence 5555555555544444 444445555666788888843
No 242
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.70 E-value=0.0012 Score=70.21 Aligned_cols=90 Identities=12% Similarity=0.064 Sum_probs=76.2
Q ss_pred HHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhh
Q 008158 393 PALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFN 472 (575)
Q Consensus 393 ~~~~r~~~r~~~~~~~~~i~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~ 472 (575)
.+.||++-| +.+.++.+..++..++.++. .+...+.+.-+++|++++... +...++.
T Consensus 84 lLaDrlG~K-------~vL~l~~l~Wsl~t~L~~fa---------------~Sl~~L~i~R~llGvaEA~~~-A~~syI~ 140 (511)
T TIGR00806 84 LLTDYLRYK-------PVLVLQALSFVCVWLLLLLG---------------TSVWHMQLMEVFYSVTMAARI-AYSSYIF 140 (511)
T ss_pred HHHHHhCch-------HHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 348887544 56777877777777777754 356677788899999999999 9999999
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008158 473 KQFPDHMKSIANSLLFCSFGFASYLSSLLITIV 505 (575)
Q Consensus 473 ~~~p~~~rg~~~g~~~~~~~lg~~l~~~l~~~i 505 (575)
.-+|++.|++++|+.+....+|..+++.+.+++
T Consensus 141 ~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll 173 (511)
T TIGR00806 141 SLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL 173 (511)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999983
No 243
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.69 E-value=0.00049 Score=70.86 Aligned_cols=139 Identities=19% Similarity=0.175 Sum_probs=109.9
Q ss_pred hhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 008158 35 GLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPK 114 (575)
Q Consensus 35 ~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 114 (575)
.+..+++.|+.+..|++..+++..++.+..+..++..++-++..| +...|++....+..++-.+..++.+
T Consensus 254 a~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~-~~~~k~Laf~a~~~ill~~~~~l~~--------- 323 (422)
T COG0738 254 AIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSR-IKPEKYLAFYALIAILLLLAVALIG--------- 323 (422)
T ss_pred HHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHHhc---------
Confidence 356789999998899999999999999999999999999999999 4988988777766665555555543
Q ss_pred CCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhh
Q 008158 115 CDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTV 194 (575)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v 194 (575)
+ .+.+.+.++.|+..+.++|++.+...+..|++.. .+... -.+.-+|+.+.|.+
T Consensus 324 -----------------g-~v~~~~l~~ig~F~simfPTIfslal~~l~~~ts-----~~s~~---l~maivGGAiiP~l 377 (422)
T COG0738 324 -----------------G-VVALYALFLIGLFNSIMFPTIFSLALKNLGEHTS-----VGSGL---LVMAIVGGAIIPPL 377 (422)
T ss_pred -----------------C-hHHHHHHHHHHHHhHHHHHHHHHHHHhccCcccc-----cccee---eeeheecchHHHHH
Confidence 1 3345666778999999999999999999994431 22222 22345888999999
Q ss_pred hhhccccccchhHhH
Q 008158 195 LVYIQDSVSWVIGFG 209 (575)
Q Consensus 195 ~~~l~~~~gw~~~f~ 209 (575)
-|++.|..|-...+.
T Consensus 378 ~G~i~d~~g~~~~~~ 392 (422)
T COG0738 378 QGVIADMFGIQLTFL 392 (422)
T ss_pred HHHHHHhhhhHHHHH
Confidence 999999998877766
No 244
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.68 E-value=0.00018 Score=80.94 Aligned_cols=128 Identities=14% Similarity=0.042 Sum_probs=89.0
Q ss_pred cccccchhHhhHhhhhcccchhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHhHh----hhhc-----------
Q 008158 370 GTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVER----GRRA----------- 434 (575)
Q Consensus 370 ~~~~~i~~~~~~i~~~~~~~~~~~~~~r~~~r~~~~~~~~~i~ig~~~~~~~~~~~~~~~~----~~~~----------- 434 (575)
+.+.+...++..+..++..+ +.+|.+|+ +.+.+|.++++++.++.++... +...
T Consensus 71 G~i~s~~~i~~~~~~i~v~~----~~~r~~r~-------~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~ 139 (633)
T TIGR00805 71 GLINGSYEIGNLLLIIFVSY----FGTKLHRP-------IVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSS 139 (633)
T ss_pred eeeeehhhHHHHHHHHHHHH----hhcccCcc-------eEEEecHHHHHHHHHHHhChHHhcCCccccccccccccccc
Confidence 34445555555555554333 37776544 4477888888888877766531 0000
Q ss_pred ----ccc-c---------------CCCc-cchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHHHHHHHHHHHHH
Q 008158 435 ----SAH-L---------------HPMS-QVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGF 493 (575)
Q Consensus 435 ----~~~-~---------------~~~~-~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~l 493 (575)
.+. . +... ...+..++++-++.|+|.+...+....++.|.+|++.|+.+.|+.+....+
T Consensus 140 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~i 219 (633)
T TIGR00805 140 ANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVF 219 (633)
T ss_pred cccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHh
Confidence 000 0 0000 113456667889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhh
Q 008158 494 ASYLSSLLITIVHGV 508 (575)
Q Consensus 494 g~~l~~~l~~~i~~~ 508 (575)
|..+++.+.+++.+.
T Consensus 220 G~~lG~llgg~l~~~ 234 (633)
T TIGR00805 220 GPAFGYLLGSFCLQI 234 (633)
T ss_pred hhHHHHHHHHHHHhc
Confidence 999999999887754
No 245
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.67 E-value=0.00035 Score=75.74 Aligned_cols=121 Identities=12% Similarity=0.066 Sum_probs=82.2
Q ss_pred HHHhhhh-hcCCCCCChHHHHHHHHHHHHHHHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHh
Q 008158 392 VPALRKI-TKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEF 470 (575)
Q Consensus 392 ~~~~~r~-~~r~~~~~~~~~i~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~ 470 (575)
.++.||+ ++| +.+.+|.++..++.+.+.... .+.....+...+..+|.+...+...++
T Consensus 66 G~LaDRilGrr-------r~iliG~il~~lg~lll~~~~--------------~~~~~~~l~l~li~iG~G~~~~~~~al 124 (493)
T PRK15462 66 GFLADKVLGNR-------MAVMLGALLMAIGHVVLGASE--------------IHPSFLYLSLAIIVCGYGLFKSNVSCL 124 (493)
T ss_pred HHHHHHccCcH-------HHHHHHHHHHHHHHHHHHHhh--------------cchhHHHHHHHHHHHhcccccccHHHH
Confidence 3347876 444 457788888887766554221 111223334445556777777777889
Q ss_pred hhccCCch--hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 008158 471 FNKQFPDH--MKSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYC 548 (575)
Q Consensus 471 ~~~~~p~~--~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~v~~i~~~~~ 548 (575)
+.|.+|++ .|.++.++.++..++|+.+++.+.+++.+.. +.++.|.+.++..+++++.+++.
T Consensus 125 v~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~----------------Gw~~~F~iaaigm~l~li~~~~~ 188 (493)
T PRK15462 125 LGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEY----------------SWAMGFGLAAVGMIAGLVIFLCG 188 (493)
T ss_pred HHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhh----------------ChHHHHHHHHHHHHHHHHHHHHh
Confidence 99999975 7999999999999999999999999987533 34677777666556665555443
Q ss_pred H
Q 008158 549 A 549 (575)
Q Consensus 549 ~ 549 (575)
.
T Consensus 189 ~ 189 (493)
T PRK15462 189 N 189 (493)
T ss_pred h
Confidence 3
No 246
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.65 E-value=0.0001 Score=78.17 Aligned_cols=159 Identities=9% Similarity=-0.001 Sum_probs=125.8
Q ss_pred hHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 008158 36 LLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKC 115 (575)
Q Consensus 36 ~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 115 (575)
+.+++--+ .++++-...-.|.....-..+-.+.-++.++|..|+ |+-+++..++...++=.+......
T Consensus 390 v~tFLfWH-led~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~ki-GHv~v~~lgLa~~~~Rf~~~S~L~---------- 457 (618)
T KOG3762|consen 390 VFTFLFWH-LEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKI-GHVNVMYLGLACNVGRFLYYSYLQ---------- 457 (618)
T ss_pred HHHHHHHH-HhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHh-cccceeeehhhHHHHHHHHHHHhc----------
Confidence 34444333 446665666666556666677778888889999995 999999999988888777777765
Q ss_pred CCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHH-HHHHHHHhhh
Q 008158 116 DVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTF-TVVILITQTV 194 (575)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~-~ig~~~~~~v 194 (575)
+.|..+..-+++|+..+.++.++.+|+++..|++. |..+-++..... .+|-.+|.++
T Consensus 458 ----------------n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l------~at~Q~l~~g~f~GlG~g~GslI 515 (618)
T KOG3762|consen 458 ----------------NPWMVLPIEILQGITHALIWAAIISYASHVAPPGL------RATAQGLLQGIFHGLGKGLGSLI 515 (618)
T ss_pred ----------------CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcc------hHHHHHHHHHHhcccCcchhhhh
Confidence 56778888899999999999999999999999987 788877766554 7888889999
Q ss_pred hhhccccccchhHhHHHHHHHHHHHHHHHhccce
Q 008158 195 LVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKL 228 (575)
Q Consensus 195 ~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~ 228 (575)
+|.+.+.+|-|..|.+.++.+++.++++....+.
T Consensus 516 GG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq~~ 549 (618)
T KOG3762|consen 516 GGFVVERFGARTTFRIFGIACLVTLALFISIQLL 549 (618)
T ss_pred hhhhheeehhHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999988888777777766655443
No 247
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.65 E-value=0.0017 Score=71.46 Aligned_cols=181 Identities=13% Similarity=0.117 Sum_probs=103.6
Q ss_pred CCCcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHH
Q 008158 13 PGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASI 92 (575)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~ 92 (575)
+..+|..........+..+.-+....+....+-+..+.+... .+...+..+...++..++.++.||+ |||+.++.+..
T Consensus 290 ~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~-gRr~lll~s~~ 367 (513)
T KOG0254|consen 290 PKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRF-GRRKLLLFGAA 367 (513)
T ss_pred cchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHhHH
Confidence 445555555555666665555544444444455566665433 5556666677778888889999995 99999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccc
Q 008158 93 AAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKG 172 (575)
Q Consensus 93 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 172 (575)
.+.+++++++.......... .|.. ......+....+.......+..|....+.+|.+|.+-
T Consensus 368 ~m~~~~~~~~~~~~~~~~~~-----------~~~~--~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~------ 428 (513)
T KOG0254|consen 368 GMSICLVILAVVGVFALYYP-----------NSSK--GAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRL------ 428 (513)
T ss_pred HHHHHHHHHHHHHHHhccCC-----------Cccc--chhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhH------
Confidence 99999998887543221000 0000 0011112222222333334445566678899999877
Q ss_pred hhhhhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHH
Q 008158 173 INSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVL 214 (575)
Q Consensus 173 r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~ 214 (575)
|+.+.++......+...+.......+.+..++...|.+.+..
T Consensus 429 r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~ 470 (513)
T KOG0254|consen 429 RSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGI 470 (513)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHH
Confidence 888887765555444443332333333333233444443333
No 248
>PTZ00207 hypothetical protein; Provisional
Probab=97.60 E-value=0.00091 Score=73.88 Aligned_cols=125 Identities=12% Similarity=0.077 Sum_probs=88.5
Q ss_pred HHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhh
Q 008158 392 VPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFF 471 (575)
Q Consensus 392 ~~~~~r~~~r~~~~~~~~~i~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~ 471 (575)
.++.||++ +++.+.+|.++..++.++.++.... ....+.+.+.+..++.|+|.+..++.....+
T Consensus 82 G~L~Dr~G-------~R~vllig~ll~~iG~ll~ala~~~---------~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i 145 (591)
T PTZ00207 82 SFIYDYLG-------PRPIFVLSMTVFCLGTLLFALTFQE---------VIEGSVVRLSVYNGLMTLGCMLFDLGAVVTV 145 (591)
T ss_pred HHHHHHhC-------cHHHHHHHHHHHHHHHHHHHHHhcc---------cccCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44577764 4467889999999998887764211 0123677777788889999999999988888
Q ss_pred hccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHh
Q 008158 472 NKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCAR 550 (575)
Q Consensus 472 ~~~~p~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~v~~i~~~~~~~ 550 (575)
.+.+| +.||.+.|+..+...+|+.+.+.+...+... + ...+|++.+++.++..++.+.+.+
T Consensus 146 ~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~-------~----------~~~~fl~l~vl~~vv~ll~~~~vr 206 (591)
T PTZ00207 146 LSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSD-------N----------TSAYFFFLMSFALVVGILAIVFMR 206 (591)
T ss_pred HHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------h----------HHHHHHHHHHHHHHHHHHHHhhee
Confidence 98887 6799999999999999998655554443321 2 245677777777766555555443
No 249
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.47 E-value=8.9e-07 Score=95.34 Aligned_cols=174 Identities=15% Similarity=0.128 Sum_probs=103.2
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHH
Q 008158 23 LGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVT 102 (575)
Q Consensus 23 ~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~ 102 (575)
+....+..+..+....+..+++.+..+.+.. -.......+...++.+++.++.|| +|||+.++.+..+..++++.++
T Consensus 258 ~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~GRr~~~i~~~~~~~~~~~~~~ 334 (451)
T PF00083_consen 258 LLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDR-FGRRKLLIIGLLLMAICSLILG 334 (451)
T ss_pred ccccccccccccccccccccccccccccccc--cccccccccccccccccccccccc-cccccccccccccccccccccc
Confidence 3333333333333444555566666776655 222334445566677777899999 5999999999888887777665
Q ss_pred -HHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHH
Q 008158 103 -LTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYY 181 (575)
Q Consensus 103 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 181 (575)
.....+. .+ ...+...+............+..+....+.+|.+|.+. |+++.++.+
T Consensus 335 ~~~~~~~~--~~---------------~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~------R~~~~~~~~ 391 (451)
T PF00083_consen 335 IIFFLGVS--SS---------------SWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKV------RSTGIGLSY 391 (451)
T ss_pred cccccccc--cc---------------cccccccceeeeeccccccccccccccccccccccccc------ccccccccc
Confidence 1110000 00 00011111111111122222445677788999999988 999999999
Q ss_pred HHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHH
Q 008158 182 TTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILF 222 (575)
Q Consensus 182 ~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~ 222 (575)
....++.++++.+..++.+..+-...|++.+++.++..+..
T Consensus 392 ~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~ 432 (451)
T PF00083_consen 392 AVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFV 432 (451)
T ss_pred ccccccccccccccccccccccccccchhhHHHHHHHHhhe
Confidence 99999999999888887776652334544444444444433
No 250
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.42 E-value=0.00024 Score=74.08 Aligned_cols=128 Identities=13% Similarity=0.094 Sum_probs=94.7
Q ss_pred HhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhcc
Q 008158 69 APLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTG 148 (575)
Q Consensus 69 ~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g 148 (575)
+..++.++.|+ +|||++-+.+++++.+..+.++...+-+ .. ....++..-+.+-++.-
T Consensus 364 Gyw~tv~~id~-iGRk~iq~~GF~~~~i~~~~~~~~y~~~----------~~-----------~~Gf~v~y~l~~ff~NF 421 (538)
T KOG0252|consen 364 GYWFTVYFIDI-IGRKYIQLMGFFIMTIFFFVIAGPYNQL----------EN-----------TIGFVVLYSLTFFFGNF 421 (538)
T ss_pred ceeEEEEEeeh-hhhHHHHHhhHHHHHHHHHHHcCCcccc----------cc-----------cCceeehHHHHHHHHhc
Confidence 55566788999 5999999999999998888877643210 01 11111222222334444
Q ss_pred CCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhhhccc-----cccchhHhHHHHHHHHHHHHHHH
Q 008158 149 GIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQD-----SVSWVIGFGIPTVLMIGAIILFL 223 (575)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~-----~~gw~~~f~~~~~~~~i~~~~~~ 223 (575)
+...+.-.+-+|.||..- |+.+.++...+.-+|+++|.....++++ ..|.+++|++.+.+.+++++..+
T Consensus 422 GPn~ttfivpaE~FParv------R~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~ 495 (538)
T KOG0252|consen 422 GPNATTFIVPAEIFPARV------RSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTL 495 (538)
T ss_pred CCCceeEEeehhhchHHH------hhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeE
Confidence 445566677799999877 9999999999999999999999999988 78899999999888887777655
Q ss_pred h
Q 008158 224 V 224 (575)
Q Consensus 224 ~ 224 (575)
+
T Consensus 496 l 496 (538)
T KOG0252|consen 496 L 496 (538)
T ss_pred E
Confidence 4
No 251
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.33 E-value=0.31 Score=51.94 Aligned_cols=188 Identities=9% Similarity=-0.057 Sum_probs=101.0
Q ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHH
Q 008158 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGM 98 (575)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~ 98 (575)
.+.+-+.+++.+.+--..-.-.+.|+.+-+.=+---.+..-..-.+...++.+.-|...||. -|.+++..+.+..-++.
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~-~Rl~~~~~~l~~Qn~sv 82 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRS-PRLKVIRTSLVVQNLSV 82 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCC-cchhhHHHHHHHHHHHH
Confidence 34455566666655554555566677655432333333333344455566667779999995 99999888877654433
Q ss_pred HHHHH----HhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchh
Q 008158 99 LTVTL----TAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGIN 174 (575)
Q Consensus 99 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 174 (575)
...+. ....+... .+ .+......+.+...+..+..=+......+.--|+...=..+++..+.
T Consensus 83 ~~s~~~~~~l~~~~~~~-----------~~---~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La 148 (432)
T PF06963_consen 83 AASCALFLLLLSYPSSS-----------SQ---SSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALA 148 (432)
T ss_pred HHHHHHHHHHHhCCccc-----------cc---cchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHH
Confidence 33221 11111000 00 00112222222223333333333334455556665432112223466
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHH
Q 008158 175 SFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIIL 221 (575)
Q Consensus 175 ~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~ 221 (575)
+..+...-.=.+.-+++|.+.|.+....|.+....+.++..++.+.+
T Consensus 149 ~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~v 195 (432)
T PF06963_consen 149 RMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFV 195 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHH
Confidence 66666555556788899999999988888887777666666665554
No 252
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.33 E-value=0.002 Score=71.00 Aligned_cols=139 Identities=12% Similarity=0.276 Sum_probs=92.4
Q ss_pred ccccccchhHhhHhhhhcccchhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHhHhhhhcccccCCCccchhHH
Q 008158 369 PGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFW 448 (575)
Q Consensus 369 ~~~~~~i~~~~~~i~~~~~~~~~~~~~~r~~~r~~~~~~~~~i~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (575)
..++...+.+...+..|+.+++ .|.++|| +.+..|.++..+|.++.+.. .+...
T Consensus 80 ~~w~~~~~~l~~av~~~~~G~L----SDlfGRr-------~~~i~g~~l~vvG~Iv~atA---------------~~~~~ 133 (599)
T PF06609_consen 80 WSWFSTAWTLASAVSFPFVGRL----SDLFGRR-------YFFIIGSLLGVVGSIVCATA---------------QNMNT 133 (599)
T ss_pred chHHHHHHHHHHHHHHHhhHHH----HHHhcch-------HHHHHHHHHHHhHHHHhhcC---------------CcHHH
Confidence 3455566677777777775555 8887666 55888888999998887754 35556
Q ss_pred HHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCCCCcchhH
Q 008158 449 LAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLD 528 (575)
Q Consensus 449 ~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~ 528 (575)
++.+..+.|+|.+.... ....+.|..|.+.|+.+.++.....-.....++.+...+.. ..+| .
T Consensus 134 ~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~------~~~W----------R 196 (599)
T PF06609_consen 134 FIAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAA------HSGW----------R 196 (599)
T ss_pred HHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhcc------CCCc----------c
Confidence 77788888888766654 45557899999999888776554443433344444433322 2467 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 008158 529 YFYFLIAGLGGLNIVYFLYCAR 550 (575)
Q Consensus 529 ~~f~~~a~i~~v~~i~~~~~~~ 550 (575)
|.|++.+++..++++..+++++
T Consensus 197 w~~~~~~i~~~i~~vl~~~fY~ 218 (599)
T PF06609_consen 197 WIFYIFIIWSGIALVLIFFFYF 218 (599)
T ss_pred hHHHHHHHHHHHHHHHHHHHhC
Confidence 6777777777776666555543
No 253
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.08 E-value=0.0074 Score=64.54 Aligned_cols=157 Identities=10% Similarity=0.019 Sum_probs=93.7
Q ss_pred chhHhhHhhhhcccchhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHhHhhhhcccccCCCccchhHHHHHHHH
Q 008158 375 ISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLI 454 (575)
Q Consensus 375 i~~~~~~i~~~~~~~~~~~~~~r~~~r~~~~~~~~~i~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 454 (575)
...++.++..|..+.. ..|.+ +-++-+..|.+++.++.+++..++.. ++-..+.+.++.+
T Consensus 79 a~slg~~i~~liF~~W----s~k~~------~~k~Pli~s~ii~~~g~llY~~l~~~----------~~~~~y~mL~~R~ 138 (488)
T KOG2325|consen 79 ASSLGHAIFSLIFGIW----SNKTG------SVKKPLIVSFLIAIIGNLLYLALAYV----------PNGVKYLMLVARI 138 (488)
T ss_pred HHHHHHHhcchhhccc----ccccC------CcccCHHHHHHHHHHHHHHHHHHHhc----------ccchHHHHHHHHH
Confidence 3555555555554332 33322 22445889999999999998666543 1226677888899
Q ss_pred HHHHHHHHHhhhhHHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCCCCcchhHHHHHHH
Q 008158 455 LMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLI 534 (575)
Q Consensus 455 l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 534 (575)
+.|+|.+. ....=.|+.+..-.+.|.++.+.......+|.++|+.+.+.+.....+ .-.|.++ ..-+-+...-|++
T Consensus 139 l~Gvg~~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~--G~~i~~~-~~~n~YTap~w~m 214 (488)
T KOG2325|consen 139 LTGVGVGN-FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEK--GFMILPG-LIFNMYTAPAWLM 214 (488)
T ss_pred HcCcCccc-HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCC--ceEEcCc-ceEEecchHHHHH
Confidence 98888533 344556777765566677777766666677777777776654332100 0112221 2222344556677
Q ss_pred HHHHHHHHHHHHHHHhhcccc
Q 008158 535 AGLGGLNIVYFLYCARRYRYK 555 (575)
Q Consensus 535 a~i~~v~~i~~~~~~~~~~~~ 555 (575)
+++.++.++...++.+|..+.
T Consensus 215 ~i~~i~~~v~i~~~f~E~~~~ 235 (488)
T KOG2325|consen 215 AILWIIYIVIILFFFKEVYRG 235 (488)
T ss_pred HHHHHHHHHHHHhheeecccC
Confidence 777777777777776665443
No 254
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.08 E-value=0.0057 Score=49.14 Aligned_cols=68 Identities=9% Similarity=0.026 Sum_probs=62.5
Q ss_pred HHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHh
Q 008158 37 LANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTA 105 (575)
Q Consensus 37 ~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~ 105 (575)
++.+.+.++++.++|.++.+++.+...+++.++++...++.++. .+++.+..+.++..+.++.+++.+
T Consensus 11 yTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~-~~~~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 11 YTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHS-RPRRLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred HHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHHh
Confidence 56778889999999999999999999999999999999999994 888999999999999999999875
No 255
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.05 E-value=0.011 Score=53.78 Aligned_cols=112 Identities=13% Similarity=0.124 Sum_probs=84.9
Q ss_pred ChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcc
Q 008158 51 NQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANS 130 (575)
Q Consensus 51 ~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (575)
++..--.-.++......+..+++..+.++ +|.|+++.++.+.+.+-.......
T Consensus 35 ~~~~G~~slai~Y~~~~~s~l~~P~iv~~-lg~K~sm~lg~~~y~~y~~~~~~~-------------------------- 87 (156)
T PF05978_consen 35 SAGLGYYSLAILYGSFAISCLFAPSIVNK-LGPKWSMILGSLGYAIYIASFFYP-------------------------- 87 (156)
T ss_pred cccccHHHHHHHHHHHHHHHHhHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhh--------------------------
Confidence 33333344666667777888888999999 599999999999887554443321
Q ss_pred hhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhh
Q 008158 131 MQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLV 196 (575)
Q Consensus 131 ~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~ 196 (575)
+.+.++.+-++.|+|.+..+.....++.+..++++ |++..+++....+.+.++|..+.-
T Consensus 88 -~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~------~~~~~~ifw~i~~~s~i~G~~~~~ 146 (156)
T PF05978_consen 88 -NSYTLYPASALLGFGAALLWTAQGTYLTSYSTEET------IGRNTGIFWAIFQSSLIFGNLFLF 146 (156)
T ss_pred -hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHH------HhhHHHHHHHHHHHHHHHHHHHHH
Confidence 45678999999999999999999999998776655 888888877777777777765543
No 256
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.97 E-value=0.0053 Score=64.18 Aligned_cols=183 Identities=13% Similarity=-0.011 Sum_probs=105.2
Q ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHH
Q 008158 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGM 98 (575)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~ 98 (575)
...+.++..+..-.+|++.+.+-.-+. .-|.+...+|.+.....++..+++.+.|.++||.-+-|++..+......++.
T Consensus 268 F~il~~~ygi~~g~F~~l~~~l~~~l~-~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~ 346 (480)
T KOG2563|consen 268 FIILAICYGIGLGLFNSLSTLLNLALC-PSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGT 346 (480)
T ss_pred HHHHHHHHhhhHHHHHHHHHHhhhccc-cccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 334444444454455555544443332 3466778899999999999999999999999997334456655555555553
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCC-CCCCcccccchhhhh
Q 008158 99 LTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQF-DATTDEGVKGINSFF 177 (575)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~-~~~~~~~~~~r~~~~ 177 (575)
..+..... +.| ..+.++....+.|....+..|.-..+..|.. |..| +.-.
T Consensus 347 ~~l~~~t~----------------~~~------~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E-------~tSs 397 (480)
T KOG2563|consen 347 LMLLTCTL----------------FLG------DSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAE-------GTSS 397 (480)
T ss_pred HHHHHhhc----------------cCC------ceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCC-------cccc
Confidence 22222111 111 3455677777888888889999889888875 5444 2223
Q ss_pred HHHHHHHHHHHHHHhhhhhhcccccc---chhHh-HHHHHHHHHHHHHHHhccceEEe
Q 008158 178 NWYYTTFTVVILITQTVLVYIQDSVS---WVIGF-GIPTVLMIGAIILFLVGKKLYVL 231 (575)
Q Consensus 178 ~~~~~~~~ig~~~~~~v~~~l~~~~g---w~~~f-~~~~~~~~i~~~~~~~~~~~~~~ 231 (575)
+..+...++-+.+-.+.-+...+..+ |.+.. +......++.+++..+.++++++
T Consensus 398 Gll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R 455 (480)
T KOG2563|consen 398 GLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRR 455 (480)
T ss_pred eeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHh
Confidence 33333334434343444444444443 33322 22334444555555666665544
No 257
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=96.96 E-value=0.003 Score=69.45 Aligned_cols=126 Identities=11% Similarity=0.182 Sum_probs=94.1
Q ss_pred cchhHhhHhhhhcccchhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHhHhhhhcccccCCCccchhHHHHHHH
Q 008158 374 VISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQL 453 (575)
Q Consensus 374 ~i~~~~~~i~~~~~~~~~~~~~~r~~~r~~~~~~~~~i~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 453 (575)
++..++.+++..+ ..++.||++|| ..+.+++++..++-+..++. .+++...+.-
T Consensus 125 s~~~~G~~vG~~i----~g~lsD~~GRk-------~~~~~~~~~~~i~~~~~a~a---------------~~~~~~~~~R 178 (521)
T KOG0255|consen 125 SLFFLGVLVGSLI----FGPLSDRFGRK-------PVLLVSLLLFIIFGILTAFA---------------PNYWMFLIFR 178 (521)
T ss_pred HHHHHHHHHHHhh----heehHhhcccH-------HHHHHHHHHHHHHHHHHHHh---------------CcHHHHHHHH
Confidence 3444444444333 34458887666 44777777777776665544 4677788888
Q ss_pred HHHHHHHHHHhhhhHHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCCCCcchhHHHHHH
Q 008158 454 ILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFL 533 (575)
Q Consensus 454 ~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 533 (575)
++.|++.+........++.|..+++.|+.+..+ ....+.++.+++....++.. +| .+.+++
T Consensus 179 fl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--------~W----------r~~~~~ 239 (521)
T KOG0255|consen 179 FLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--------DW----------RWLFWI 239 (521)
T ss_pred HHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--------hH----------HHHHHH
Confidence 999999999999999999999999999999999 88888888888888887764 56 567777
Q ss_pred HHHHHHHHHHH
Q 008158 534 IAGLGGLNIVY 544 (575)
Q Consensus 534 ~a~i~~v~~i~ 544 (575)
..+..++.+++
T Consensus 240 ~~~~~~~~~~~ 250 (521)
T KOG0255|consen 240 ISIPSGLFLLL 250 (521)
T ss_pred HHHHHHHHHHH
Confidence 77777666555
No 258
>PRK03612 spermidine synthase; Provisional
Probab=96.60 E-value=0.067 Score=58.70 Aligned_cols=174 Identities=7% Similarity=-0.049 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHH-HHHHHHH-HHH
Q 008158 21 YILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTIT-FASIAAI-LGM 98 (575)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~-~~~~l~~-~~~ 98 (575)
.+....++...+..+.-....-.+...+|-+....+.+++++.++..+++.++|+++++. -|+.... ++..+.. ++.
T Consensus 18 ~l~~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~-~~~~~~~e~~i~l~~~~~~ 96 (521)
T PRK03612 18 LLLAAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDA-AAGFVAVELLLALLGGLSA 96 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHHHHH
Confidence 344444455555455555666677777898999999999999999999999999887552 3332211 1111111 111
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhH
Q 008158 99 LTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFN 178 (575)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 178 (575)
.+........ ......++...++.++..|+..|....+..+... ++ -++..+
T Consensus 97 ~ll~~~~~~~---------------------~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~-~~------~g~~~g 148 (521)
T PRK03612 97 LILYAAFAFQ---------------------GLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRD-QH------LGHNVA 148 (521)
T ss_pred HHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cc------hhhhhh
Confidence 1111111000 0011122333445677777777766555543222 11 355667
Q ss_pred HHHHHHHHHHHHHhhhhhhccc-cccc-hhHhHHHHHHHHHHHHHHH
Q 008158 179 WYYTTFTVVILITQTVLVYIQD-SVSW-VIGFGIPTVLMIGAIILFL 223 (575)
Q Consensus 179 ~~~~~~~ig~~~~~~v~~~l~~-~~gw-~~~f~~~~~~~~i~~~~~~ 223 (575)
..|...++|+++|.++.+++.- ..|- +..+.+..+..++++++.+
T Consensus 149 ~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~~~ 195 (521)
T PRK03612 149 TVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVFLW 195 (521)
T ss_pred hhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 7777888888888888776543 4564 3444444444444443333
No 259
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.54 E-value=0.015 Score=59.62 Aligned_cols=150 Identities=17% Similarity=0.150 Sum_probs=112.4
Q ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHH-hhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhccc-chHHHHHHHHHHHH
Q 008158 19 MPYILGNETFERLATIGLLANFMVYL-LKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIG-RFKTITFASIAAIL 96 (575)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl-~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~G-rr~~~~~~~~l~~~ 96 (575)
++.++....+.-.-.|....+...++ .+.+|+++.|.|-+.+...+.+.+.++.-.+..||..| -+-.+..++.++.-
T Consensus 262 ~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP 341 (451)
T KOG2615|consen 262 VLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVP 341 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHH
Confidence 33444444444444444444555555 45799999999999999999999999999999999733 34455555555555
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhh
Q 008158 97 GMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSF 176 (575)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 176 (575)
..+....+. ....++.+..+-.+..+...++...++....|+++ ||..
T Consensus 342 ~~llls~~~--------------------------~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~q------rG~~ 389 (451)
T KOG2615|consen 342 AFLLLSLAR--------------------------TPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQ------RGTL 389 (451)
T ss_pred HHHHHhccc--------------------------cchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCccc------chHH
Confidence 555555443 34567888888899999999999999999999887 9999
Q ss_pred hHHHHHHHHHHHHHHhhhhhhccc
Q 008158 177 FNWYYTTFTVVILITQTVLVYIQD 200 (575)
Q Consensus 177 ~~~~~~~~~ig~~~~~~v~~~l~~ 200 (575)
.++......++=++||.++|.+..
T Consensus 390 ~Gi~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 390 NGIFRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred HHHHHHHHHHHHHhhhhhhheeEE
Confidence 999999999999999999988765
No 260
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.42 E-value=0.18 Score=56.79 Aligned_cols=325 Identities=9% Similarity=-0.061 Sum_probs=190.3
Q ss_pred HHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 008158 39 NFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDVA 118 (575)
Q Consensus 39 ~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (575)
...++..--.+....+......++.....+..+.....+|-.-|+-..+..-....+++.++..+... +..
T Consensus 6 m~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai-~a~-------- 76 (654)
T TIGR00926 6 MRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSF-GAI-------- 76 (654)
T ss_pred cHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh-ccC--------
Confidence 34444444445555667778888999999999999999999766667888777777787777776541 110
Q ss_pred CCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhhhc
Q 008158 119 KPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYI 198 (575)
Q Consensus 119 ~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l 198 (575)
..........+....+.++.++..++-+.+.++..+.. +.+.+.+..+++++....+. +|..++..+
T Consensus 77 ---------~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf---~~~~~~~~~s~F~~fY~~iN-iGSlis~~i 143 (654)
T TIGR00926 77 ---------PSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQF---EERQLSLRSRFFSFFYFAIN-AGSLISTII 143 (654)
T ss_pred ---------cccccchHHHHHHHHHHHHHhhccccccCchhhhHhhc---CccchhHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 00111334455667788899999999999999998753 35567789999999887666 466777776
Q ss_pred ccccc-chh------HhHH-HHHHHHHHHHHHHhccceEEeeCCCCCcchhHHHHHHHHHHhhcccCCCCCCCCCccccC
Q 008158 199 QDSVS-WVI------GFGI-PTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQVLVAAYKKRRLTLPQGQMDHHGIFYD 270 (575)
Q Consensus 199 ~~~~g-w~~------~f~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (575)
..... +.. .|.. .++..++.++.++.....++.-++++.......++........+
T Consensus 144 ~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~---------------- 207 (654)
T TIGR00926 144 TPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALR---------------- 207 (654)
T ss_pred HHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHH----------------
Confidence 65443 221 2333 34444444444554444333222221111111111111110000
Q ss_pred CCCcccccccCCCcchhhhhhhhhhhccCCCCCCCCCCCCccccc--hhhHHHhHhhhhhhHHHHHHHHHHHHhhccccc
Q 008158 271 PPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLC--SIQQVEEVKCLIKIIPIWAAGIISLTSISQQGT 348 (575)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 348 (575)
+. . +. ........|... .....++.+...+.+.++.....+++.+.++..
T Consensus 208 --------------------~~-----~-~~--~~~~~~~~~ld~a~~~~~~~~V~evkrll~il~l~i~~~ifw~~~~Q 259 (654)
T TIGR00926 208 --------------------KR-----F-ST--RSEHWPLHWLDYAKDKHDIRMIRSTKRLLRVLVLFIPLPMFWALFDQ 259 (654)
T ss_pred --------------------Hh-----h-cc--CCcccchhHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 00 0 00 000000112111 111223456676777777777777777777655
Q ss_pred eeeeecccccccCCCccccCccccccchhHhhHhhhhcccchhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHh
Q 008158 349 FTVSQAMKMNRHLGPKFQIPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLV 428 (575)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~~~~~~r~~~r~~~~~~~~~i~ig~~~~~~~~~~~~~~ 428 (575)
....+..+++...+ ++...+.....++.+-.+...++...+..++..++ +| .-.+.+.+.-+.+.+.++.+.+.++
T Consensus 260 ~~s~~~~qa~~m~~-~l~g~~ip~~~lq~~n~L~IIil~Pi~~~~lyp~l-~~--~~~~ls~l~k~~iG~~la~la~~va 335 (654)
T TIGR00926 260 QGSRWTLQATRMDG-DVGGFEIQPDQMQVVNPLLILIFVPIFDYIVYPAI-AK--CGTRFTSLRKMAVGGLLAALSFFVA 335 (654)
T ss_pred chhHHHHHHHHhcC-ccCCEecCHHHHHHHHHHHHHHhHHHHHHhHHHHH-Hh--cCCCCChHHHHHHHHHHHHHHHHHH
Confidence 66665556665543 33233334456778888888777777666777776 22 1124567888888888888888888
Q ss_pred Hhhhh
Q 008158 429 ERGRR 433 (575)
Q Consensus 429 ~~~~~ 433 (575)
+....
T Consensus 336 ~~ve~ 340 (654)
T TIGR00926 336 ALVQL 340 (654)
T ss_pred HHHHH
Confidence 77777
No 261
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=96.25 E-value=0.074 Score=52.32 Aligned_cols=92 Identities=15% Similarity=0.226 Sum_probs=69.1
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHHHHH
Q 008158 406 TLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANS 485 (575)
Q Consensus 406 ~~~~~i~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g 485 (575)
+++..+.+|.+...++..+.......+ ....+.|.+.+..++.+.+....++....-..+.+|. .||++.|
T Consensus 64 gp~~~l~iG~~~~~~GY~~~~l~~~~~--------i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvg 134 (250)
T PF06813_consen 64 GPWVVLLIGAVLGFVGYGLLWLAVSGR--------IPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVG 134 (250)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhCc--------cCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceeh
Confidence 566678889888888887776654332 1234667777766777778888888888888899985 6999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q 008158 486 LLFCSFGFASYLSSLLITIVH 506 (575)
Q Consensus 486 ~~~~~~~lg~~l~~~l~~~i~ 506 (575)
+.-....|++.+-+.+...+.
T Consensus 135 ilk~~~GLSaai~t~i~~~~f 155 (250)
T PF06813_consen 135 ILKGFFGLSAAIFTQIYSAFF 155 (250)
T ss_pred hhhHHHHhHHHHHHHHHHHHc
Confidence 999999998888776665554
No 262
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.20 E-value=0.044 Score=61.30 Aligned_cols=174 Identities=13% Similarity=0.191 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHH-HHHHhhhhHHHhhhc-ccchHHHHHHHHHHHHHH
Q 008158 21 YILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGV-TNFAPLLGAFISDTY-IGRFKTITFASIAAILGM 98 (575)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~-~~~~~~~~G~laD~~-~Grr~~~~~~~~l~~~~~ 98 (575)
..+....++.+.+-+..+++|.|+.++++.+.+.+..+++...+. ..++..++|++.-|+ +.-|.+..+.++...+..
T Consensus 396 ~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l 475 (735)
T KOG3626|consen 396 LVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSL 475 (735)
T ss_pred HHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHH
Confidence 445688889999999999999999999999999999999888766 558888999999986 234455555555444443
Q ss_pred HHHH---HH--------------hhcCCCCCCC-----------CC---------CC-----CCCC--------------
Q 008158 99 LTVT---LT--------------AWLPQLHPPK-----------CD---------VA-----KPPF-------------- 122 (575)
Q Consensus 99 ~~~~---~~--------------~~~~~~~~~~-----------~~---------~~-----~~~~-------------- 122 (575)
+... +. .+.|....++ |+ .. +|=|
T Consensus 476 ~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~~~~ 555 (735)
T KOG3626|consen 476 LFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTSDGNT 555 (735)
T ss_pred HHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCCCCce
Confidence 3311 10 0011111111 11 10 1112
Q ss_pred --------------------CccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHH
Q 008158 123 --------------------GQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYT 182 (575)
Q Consensus 123 --------------------~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 182 (575)
+.|..........+++..++..+-.+...+....++-+..++++ |..++++..+
T Consensus 556 ~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~------ks~AlG~~~~ 629 (735)
T KOG3626|consen 556 IYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEE------KSFALGFQWM 629 (735)
T ss_pred eeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCchh------chhhhHHHHH
Confidence 22322212223334444444445455555667778888999988 9999999777
Q ss_pred HH-HHHHHHHhhhhhhccc
Q 008158 183 TF-TVVILITQTVLVYIQD 200 (575)
Q Consensus 183 ~~-~ig~~~~~~v~~~l~~ 200 (575)
.. .+|.+-+|++.|++.|
T Consensus 630 ~irllg~IPsPIifG~~ID 648 (735)
T KOG3626|consen 630 LIRLLGFIPSPIIFGAVID 648 (735)
T ss_pred HHHHHhcCCchHhhhhhHh
Confidence 65 7889999999999875
No 263
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=96.03 E-value=0.0079 Score=63.87 Aligned_cols=120 Identities=13% Similarity=0.097 Sum_probs=92.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCch--hHHHH
Q 008158 406 TLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDH--MKSIA 483 (575)
Q Consensus 406 ~~~~~i~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~--~rg~~ 483 (575)
..++.+.+|.+++.+|.++++..+ ..+...+.+++.+.++|.++.=+.....+.|+.|++ .|-.+
T Consensus 90 G~~~tI~lGail~~iGh~~L~~~~-------------~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~g 156 (498)
T COG3104 90 GTRRTIVLGAILMAIGHLVLAISS-------------VSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGG 156 (498)
T ss_pred chhHHHHHHHHHHHHHHHHHhccc-------------cccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCC
Confidence 344668999999999999988542 023445677788888999999999999999998752 35556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 008158 484 NSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCARRYRY 554 (575)
Q Consensus 484 ~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~v~~i~~~~~~~~~~~ 554 (575)
.++..+..++|+.+++.+.+++.+.. +++..|...++-...+++.+++..++.+.
T Consensus 157 Ft~fY~~iNiGsl~~p~i~~~~~~~~----------------g~~~gF~~aavGm~~gl~~f~~~~r~~~~ 211 (498)
T COG3104 157 FTLFYMGINIGSLIAPIITGLLAINY----------------GWHVGFGLAAVGMIIGLVIFLLGRRHVKG 211 (498)
T ss_pred ccEEEEEeehHHHHHHHHHHHHHHhh----------------CHHHHHHHHHHHHHHHHHHHHHccchhcC
Confidence 77777888899999999999887643 45778888888888888888877555444
No 264
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.03 E-value=0.039 Score=57.87 Aligned_cols=125 Identities=16% Similarity=0.097 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCch---hHHHHHH
Q 008158 409 QRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDH---MKSIANS 485 (575)
Q Consensus 409 ~~i~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~---~rg~~~g 485 (575)
+.+.+|.++..+|.+++.+....... ....+...+.+++.+.++|.+..=|....+..|+++++ .|.....
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~------~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~ 75 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSL------PSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFN 75 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchh------hhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHH
Confidence 34778888888888886655321100 01234566788888999999999999999999999876 4555666
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 008158 486 LLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCARRYRYK 555 (575)
Q Consensus 486 ~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~v~~i~~~~~~~~~~~~ 555 (575)
.+....++|..++..+.+++-+.. ++...|.+.++..+++++.++...++++++
T Consensus 76 ~fY~~in~G~~~~~~~~~~i~~~~----------------~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~ 129 (372)
T PF00854_consen 76 WFYWGINIGSLFSPTLVPYIQQNY----------------GWFLGFGIPAIGMLLALIVFLSGRKRYRKV 129 (372)
T ss_dssp HHHHHHHHHHHHHHHCCCHHHHCS-----------------HHHHHHHHHHHHHHHHHHHHCCCCTT--S
T ss_pred HHHHHHhhhhHhhcccchhhcccc----------------chhhhhhHHHHHHHHHHHHHHhCCcCCcCc
Confidence 677888899999888887776532 456788888888888888877766666554
No 265
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=95.84 E-value=0.03 Score=60.29 Aligned_cols=126 Identities=13% Similarity=0.204 Sum_probs=104.6
Q ss_pred HHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhH-HHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 008158 39 NFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGA-FISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDV 117 (575)
Q Consensus 39 ~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G-~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 117 (575)
.+..|++..+++++.+.+...+.......+..++.. .+.-. +|-|+++..|+....++....+++.
T Consensus 263 ~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~-l~~~~~i~lGl~~~~~~~~~~af~~------------ 329 (463)
T KOG2816|consen 263 VLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSI-LGEKRLISLGLLSEFLQLLLFAFAT------------ 329 (463)
T ss_pred EEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhHhhHHHHHHHHHHHHHHHhc------------
Confidence 446788889999999999999999999999988887 55665 6999999999999999999999976
Q ss_pred CCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhhh
Q 008158 118 AKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVY 197 (575)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~ 197 (575)
+.+..+....+.++ .+...|..-++.+.+.++++ +|+.+++.+....+...++|.+-+.
T Consensus 330 --------------~~w~~~~~~v~~~~-~~~~~pa~~s~~s~~v~~~e------~g~v~~~is~i~~l~~~~~~~~~~~ 388 (463)
T KOG2816|consen 330 --------------ETWMMFAAGVVVAL-AGIVFPAIRAFASILVSPEE------QGKVFGIISGIEGLSGVVSPALYGN 388 (463)
T ss_pred --------------cchhhhHHHHHHHh-hcchhHHHHhHHHhhccccc------ccchhhHHHHHHHHhhhhhHHHHHH
Confidence 34455665555544 45667888899999999888 9999999999999999999988776
Q ss_pred c
Q 008158 198 I 198 (575)
Q Consensus 198 l 198 (575)
+
T Consensus 389 i 389 (463)
T KOG2816|consen 389 I 389 (463)
T ss_pred H
Confidence 5
No 266
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.40 E-value=0.0041 Score=68.41 Aligned_cols=175 Identities=15% Similarity=0.176 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHH-HHHHHhhhhHHHhhhc-ccchHHHHHHHHHHHHHH
Q 008158 21 YILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGG-VTNFAPLLGAFISDTY-IGRFKTITFASIAAILGM 98 (575)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~-~~~~~~~~~G~laD~~-~Grr~~~~~~~~l~~~~~ 98 (575)
.......++.+..-++.+++|.|++.+|+.+.++++.+++...+ +..++.+++|++..|+ ++.|+++....+..+++.
T Consensus 309 ~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~ 388 (539)
T PF03137_consen 309 CLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSV 388 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHH
Confidence 33456777778888899999999999999999999999988877 5678999999999996 224455555554444443
Q ss_pred HHHH---H--HhhcCC--CCC---------------CCCCC------CCCCCCccCCCcchhhHHHHHHHHHHHHhccCC
Q 008158 99 LTVT---L--TAWLPQ--LHP---------------PKCDV------AKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGI 150 (575)
Q Consensus 99 ~~~~---~--~~~~~~--~~~---------------~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~ 150 (575)
+... + -.+.+. +.. ..|.. ..+..+.|...=......+++..++..+..+..
T Consensus 389 ~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~ 468 (539)
T PF03137_consen 389 ILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMS 468 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhc
Confidence 3311 0 111110 100 11100 112456776541224555556655555555555
Q ss_pred ccccccccccCCCCCCcccccchhhhhHHHHHHH-HHHHHHHhhhhhhcccc
Q 008158 151 RPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTF-TVVILITQTVLVYIQDS 201 (575)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~-~ig~~~~~~v~~~l~~~ 201 (575)
........-+..|+++ |+.+.++..... -+|.+-||++.|++.|.
T Consensus 469 ~~p~~~i~LR~V~~~~------rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 469 QVPSTLITLRCVPPEQ------RSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp ----------------------------------------------------
T ss_pred ccchheeeeccCChhh------cchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 5555666778888887 999999977665 67889999999998875
No 267
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=95.23 E-value=0.2 Score=53.80 Aligned_cols=118 Identities=18% Similarity=0.172 Sum_probs=80.3
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhHhhhhcccccCCCccchhHHHHHHHHHHHHHHHHHhhhhHHhhhccC---CchhHHH
Q 008158 406 TLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQF---PDHMKSI 482 (575)
Q Consensus 406 ~~~~~i~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~---p~~~rg~ 482 (575)
+++.-+.+|.++..++.+.++..... ..+.......+++..+|.++.....-+...|.. |.+ +|.
T Consensus 57 rr~~Y~~i~~~~~~~~~~~~~~~~~~-----------~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~-~g~ 124 (433)
T PF03092_consen 57 RRKPYMIIGWLLGAVSALVLALLPAS-----------ESSAAIAVVLLFLASFGYAFADVAADALVVELARREPES-RGD 124 (433)
T ss_pred cchHHHHHHHHHHHHHHHHHHhcccc-----------cchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch-hHH
Confidence 34566777777776666665554221 123334455567778888888888888887776 344 888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 008158 483 ANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCARR 551 (575)
Q Consensus 483 ~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~v~~i~~~~~~~~ 551 (575)
.++.......+|+.++..+.+...+.. +.+..|.+.+.+.++..+..+++..+
T Consensus 125 lqS~~~~~~~~G~lv~~~l~G~l~~~~----------------~~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 125 LQSFVWGVRSVGSLVGSLLSGPLLDSF----------------GPQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhcC----------------CCeEEehHHHHHHHHHHHHHHHhhhh
Confidence 899999999999999999998877643 22345666677766666666655554
No 268
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=95.17 E-value=5.7 Score=42.79 Aligned_cols=66 Identities=9% Similarity=0.054 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCC
Q 008158 449 LAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHGVTARHGH 514 (575)
Q Consensus 449 ~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~ 514 (575)
++...++..+..-.-+.+..++-.+.+.|..-|++|.+.|+.+++|+.--..+.-+..|..+...+
T Consensus 408 vI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT~~~C 473 (544)
T PF13000_consen 408 VIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYFTVATC 473 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhcccccc
Confidence 444667777888888999999999999999999999999999999999888777777777655443
No 269
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=94.37 E-value=1.9 Score=43.36 Aligned_cols=60 Identities=15% Similarity=0.216 Sum_probs=45.1
Q ss_pred chhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 008158 444 VSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLIT 503 (575)
Q Consensus 444 ~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~lg~~l~~~l~~ 503 (575)
.++|.+.+..+.-|+-.+..+...+--+.++.+++.|..+++...+...+|..+++.+.-
T Consensus 340 psi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lal 399 (409)
T KOG3880|consen 340 PSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLAL 399 (409)
T ss_pred cHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhc
Confidence 355555555555677667777777778889999999999999988888888887776653
No 270
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=92.39 E-value=16 Score=38.39 Aligned_cols=58 Identities=22% Similarity=0.188 Sum_probs=46.5
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 008158 445 SVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLI 502 (575)
Q Consensus 445 ~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~lg~~l~~~l~ 502 (575)
+-++.+....++|+..+-.....+.++.+.+|++++..+..++...-..|-..|..+.
T Consensus 342 ~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 342 SDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred CchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 3345566678889999999999999999999999999998888777777766666543
No 271
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=92.23 E-value=3.3 Score=37.58 Aligned_cols=62 Identities=15% Similarity=0.263 Sum_probs=54.4
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008158 445 SVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVH 506 (575)
Q Consensus 445 ~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~ 506 (575)
+.+.+++.-.+.|+|.+...++.-.++.+...++.+++-.++.......+.++|..+.-.+.
T Consensus 88 ~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 88 NSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56677888899999999999999999999999999999999999988888888877765554
No 272
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=91.83 E-value=2.2 Score=45.71 Aligned_cols=116 Identities=15% Similarity=0.074 Sum_probs=71.8
Q ss_pred HHHHHhhhhHHHh---hhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHH
Q 008158 65 VTNFAPLLGAFIS---DTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLG 141 (575)
Q Consensus 65 ~~~~~~~~~G~la---D~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 141 (575)
+..++..+.+.+. ++ +||++++.++..+..++.++.-+.. |...+ . +++...-..- ..+.....+.-+
T Consensus 291 g~v~~g~~~~~l~~rir~-fg~~~~~~~~~~~~~~~~~li~l~~--p~dap-~----~~t~~~~~~~-~~~~~~~~ii~~ 361 (461)
T KOG3098|consen 291 GEVIGGLDFSILSKRIRG-FGRKPTVLIGIIIHLIGFLLIHLSF--PNDAP-L----RPTDSPPLLF-TPSYYLALIIGF 361 (461)
T ss_pred HHHHHHHHHHHHhhhhhh-cccCcchhHHHHHHHHHHHHHhccc--cccCC-C----CCCccccccc-ccchhHHHHHHH
Confidence 3444444455554 55 5899999999998888777665532 32110 0 0000000000 113445666678
Q ss_pred HHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhh
Q 008158 142 LLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLV 196 (575)
Q Consensus 142 l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~ 196 (575)
++|++-++.....+.++++.+|+ + |..+++++-.-..++..++-....
T Consensus 362 l~G~~D~~~~t~~~~ii~~~~~~-~------~~~~fsi~kfyq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 362 LLGFGDACFNTQRYVIIALLYPD-D------RAQAFSLFKFYQSVASCVAFFFSP 409 (461)
T ss_pred HHhhHHHHHHHHHHHHHHHHhcC-c------hHHHHHHHHHHHHHHHHHHhhhhh
Confidence 89999999999999999999954 3 788888777766666655443333
No 273
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=90.16 E-value=30 Score=37.29 Aligned_cols=168 Identities=10% Similarity=-0.021 Sum_probs=98.6
Q ss_pred chhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCC---hhhHHHHHHHHHH-HHHHHhhhhHHHhhhcccchHHHHHHHH
Q 008158 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMN---QTSAANILNIWGG-VTNFAPLLGAFISDTYIGRFKTITFASI 92 (575)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~---~~~~~~i~~~~~~-~~~~~~~~~G~laD~~~Grr~~~~~~~~ 92 (575)
+.++.+...-+|-.+.++.+ --+++.+.++ +.....+-...-. +..+..++-+++.+++ -|.+++-+-..
T Consensus 27 ~kflpl~Ll~f~I~~ny~~l-----R~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~l-t~~~vF~~~~~ 100 (509)
T COG3202 27 KKFLPLALLFFCILFNYNLL-----RSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNIL-TREKVFYIILG 100 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHH-----HHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhc-CHHHHHHHHHH
Confidence 44555444444444443322 3366666554 4455566666666 5667788889999995 99999988888
Q ss_pred HHHHHHHHHHHHhhcC--C-CCCCCCCC-----CCCCCCcc--CCCcchhhHHHHHHHHHHHHhccCCcc-ccccccccC
Q 008158 93 AAILGMLTVTLTAWLP--Q-LHPPKCDV-----AKPPFGQC--KSANSMQLGVLVMGLGLLSIGTGGIRP-CSIPFGVDQ 161 (575)
Q Consensus 93 l~~~~~~~~~~~~~~~--~-~~~~~~~~-----~~~~~~~~--~~~~~~~~~~l~~~~~l~g~g~g~~~~-~~~~~~~~~ 161 (575)
.+....+++++.-. | + +|+++.-+ ..|++... ..-+.++...+++.- -+=.....+ .-.++..|+
T Consensus 101 ~F~~fF~LFa~Vi~-P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~a---ELWgslV~S~lFw~faNei 176 (509)
T COG3202 101 FFLGFFALFAFVIY-PYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMA---ELWGSLVLSLLFWQFANEI 176 (509)
T ss_pred HHHHHHHHHHHHHh-ccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHH---HHHHHHHHHHHHHHHHHHh
Confidence 88777777776542 2 2 22221100 11212111 111122333333321 111111111 345667788
Q ss_pred CCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhhhccc
Q 008158 162 FDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQD 200 (575)
Q Consensus 162 ~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~ 200 (575)
+..+| -.|+++.++.+.|++.+++..+..++..
T Consensus 177 tt~~e------akRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 177 TTIEE------AKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred hhHHH------hhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 87766 7999999999999999999988888765
No 274
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=89.14 E-value=5.1 Score=39.43 Aligned_cols=58 Identities=14% Similarity=0.188 Sum_probs=38.3
Q ss_pred chhhhhHHHHHHHHHHHHHHhhhhhhc---c--ccccchhHhHHHHHHHHHHHHHHHhccceE
Q 008158 172 GINSFFNWYYTTFTVVILITQTVLVYI---Q--DSVSWVIGFGIPTVLMIGAIILFLVGKKLY 229 (575)
Q Consensus 172 ~r~~~~~~~~~~~~ig~~~~~~v~~~l---~--~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~ 229 (575)
+|+....+..++.++|.++.-+..-.- . ....|++++.+.+.+..+-++++.+..++.
T Consensus 3 ~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~f 65 (267)
T PF07672_consen 3 KKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNF 65 (267)
T ss_pred ccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 466777777778888888765332211 1 123599999888887777777777666554
No 275
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=88.65 E-value=15 Score=39.27 Aligned_cols=134 Identities=9% Similarity=0.076 Sum_probs=96.7
Q ss_pred HHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 008158 38 ANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDV 117 (575)
Q Consensus 38 ~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 117 (575)
..+..|+... |+++...|..=+...+....+.....++.+|+ |-.|+=+++......+...+..+-..|...
T Consensus 279 ~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~ri-Glvr~G~~~l~~q~~~L~~~v~~~~~~~~~------ 350 (432)
T PF06963_consen 279 GLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRI-GLVRAGLWSLWWQWVCLALCVVSFWAPGSP------ 350 (432)
T ss_pred HHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchhhHHHHHHHHHHHHHHHHHHHhcCCCC------
Confidence 3567888866 99999999999999999999999999999995 999988888887776666555543322100
Q ss_pred CCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhh
Q 008158 118 AKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVL 195 (575)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~ 195 (575)
.+..+...++.+.++-=+|-=++=-+...++-|..|+++ |+...+..+...++--.+-..+.
T Consensus 351 ----------~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~------Rg~v~gvq~sl~~lf~ll~~~~~ 412 (432)
T PF06963_consen 351 ----------FSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESE------RGAVSGVQNSLQSLFELLSFVLT 412 (432)
T ss_pred ----------chhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHH------hhHHHHHHHHHHHHHHHHHHHHH
Confidence 011233444444444444544455567777888888877 99999999988888887776554
No 276
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=88.45 E-value=40 Score=36.78 Aligned_cols=140 Identities=11% Similarity=0.038 Sum_probs=76.7
Q ss_pred hhhHHHHHHHHHH-HHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcC--C-CCCCCC-CCC---CCCCC
Q 008158 52 QTSAANILNIWGG-VTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLP--Q-LHPPKC-DVA---KPPFG 123 (575)
Q Consensus 52 ~~~~~~i~~~~~~-~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~-~~~---~~~~~ 123 (575)
......+-....+ +..+...+-.+++|++ +|.+++-+....+..-..+.++.- .| . ++++.. |.. .+++.
T Consensus 57 ae~I~flK~~~vlP~a~~f~~~y~kl~n~~-s~~~lFy~~~~~F~~fF~~f~~vl-yP~~~~lhp~~~~~~~~~~~~~~~ 134 (491)
T PF03219_consen 57 AEVIPFLKVWGVLPVAILFTILYSKLSNRL-SREKLFYIIIIPFLGFFALFAFVL-YPNRDILHPDAFADKLLAILPPGF 134 (491)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHHHHHH-hhchhhcCCCHHHHHhhhhccchH
Confidence 3444444443333 3445566778999995 999988877776666555555432 23 1 222111 110 11111
Q ss_pred ccCCCcchhhHHHHHHHHHHHHhccCCcc-ccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhhhccc
Q 008158 124 QCKSANSMQLGVLVMGLGLLSIGTGGIRP-CSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQD 200 (575)
Q Consensus 124 ~~~~~~~~~~~~l~~~~~l~g~g~g~~~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~ 200 (575)
...- ...+.|...+.-++.-+=.....+ .-.++..|.++.+| -.|.++.+..+.|+|.+++..+..++.+
T Consensus 135 ~~~i-~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~e------AKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 135 KGFI-AMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEE------AKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1100 000111111111112121112122 45778888998877 8999999999999999999988777665
No 277
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=87.08 E-value=1.4 Score=46.62 Aligned_cols=91 Identities=16% Similarity=-0.054 Sum_probs=60.2
Q ss_pred CCcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhh-C----------------CChhhHHHHHHHHHHHHHHHhhhhHHH
Q 008158 14 GGWKAMPYILGNETFERLATIGLLANFMVYLLKEY-H----------------MNQTSAANILNIWGGVTNFAPLLGAFI 76 (575)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l-~----------------~~~~~~~~i~~~~~~~~~~~~~~~G~l 76 (575)
...|.++.++..+++.+++++...-+..-++-++. | -....-.|=+.++.+...+.+...-++
T Consensus 276 ~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l 355 (498)
T KOG0637|consen 276 VMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEKL 355 (498)
T ss_pred hCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHH
Confidence 35578888888888888887766655555554321 1 111223344666777778888888999
Q ss_pred hhhcccchHHHHHHHHHHHHHHHHHHHHh
Q 008158 77 SDTYIGRFKTITFASIAAILGMLTVTLTA 105 (575)
Q Consensus 77 aD~~~Grr~~~~~~~~l~~~~~~~~~~~~ 105 (575)
.||+ |-|+.++.+...+.+++.+.++..
T Consensus 356 ~~~~-g~r~~y~~~~~~f~~~~~~~gl~~ 383 (498)
T KOG0637|consen 356 SRKF-GTRKRYWGGVNAFGLATGLAGLVL 383 (498)
T ss_pred HHhc-CcceEEeehhHHHHHHHHHHhhhh
Confidence 9995 977766666665666666666543
No 278
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=82.64 E-value=42 Score=34.77 Aligned_cols=63 Identities=14% Similarity=0.132 Sum_probs=36.0
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhHHhh-----hccCCchhHHHHHHHHH-HHHHHHHHHHHHHHHHhhh
Q 008158 445 SVFWLAPQLILMGFCEAFNIIGQIEFF-----NKQFPDHMKSIANSLLF-CSFGFASYLSSLLITIVHG 507 (575)
Q Consensus 445 ~~~~~i~~~~l~g~g~~~~~~~~~~~~-----~~~~p~~~rg~~~g~~~-~~~~lg~~l~~~l~~~i~~ 507 (575)
+...++++=++.|++..+.+..-=++. ..-+|++..+...+... ..+.+-.++++.+..+..+
T Consensus 120 ~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~ 188 (354)
T PF05631_consen 120 NYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLAD 188 (354)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHH
Confidence 566778888999999888887654444 33355555444444333 2333444444444444443
No 279
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=80.94 E-value=9.4 Score=40.31 Aligned_cols=61 Identities=5% Similarity=-0.096 Sum_probs=52.2
Q ss_pred hhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhhhc
Q 008158 132 QLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYI 198 (575)
Q Consensus 132 ~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l 198 (575)
+.+..++..+..|+..|+.+.+....+.|..|+++ |...++...++-++|..++..++-++
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~------REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPED------REFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHH------HHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 56677777888999999999999999999988777 99999999999899998888776554
No 280
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=76.24 E-value=1.2e+02 Score=32.93 Aligned_cols=57 Identities=11% Similarity=-0.088 Sum_probs=44.2
Q ss_pred HHHHHHHH-HHHHHhhhhHHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008158 451 PQLILMGF-CEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHG 507 (575)
Q Consensus 451 ~~~~l~g~-g~~~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~ 507 (575)
+.++..-+ +...++-.-+.++.|....++-.+..++....+++|..+++.+..++.+
T Consensus 133 ~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 133 LFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333 3333444788999999999999999999999999999999988887654
No 281
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=74.34 E-value=1.2e+02 Score=32.11 Aligned_cols=62 Identities=15% Similarity=0.124 Sum_probs=47.2
Q ss_pred chhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008158 444 VSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVH 506 (575)
Q Consensus 444 ~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~ 506 (575)
.+.+.+-+.-++.|++.+. -.+.++|+...+|++.--++++......-+|..++..++-.+.
T Consensus 92 ~sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllv 153 (412)
T PF01770_consen 92 TSVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLV 153 (412)
T ss_pred CcHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566666667777877654 6777899999999998889998888777777777776666554
No 282
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=73.30 E-value=1.4e+02 Score=32.13 Aligned_cols=58 Identities=16% Similarity=0.199 Sum_probs=48.5
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 008158 446 VFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLIT 503 (575)
Q Consensus 446 ~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~lg~~l~~~l~~ 503 (575)
-++.++..+++|+..+......+.+..+.+++++|..+..++...-.+|-.+|+.+.-
T Consensus 372 d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~ 429 (437)
T TIGR00939 372 DAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSF 429 (437)
T ss_pred cHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555788999999999999999999999999999999988888888888876643
No 283
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=73.09 E-value=38 Score=36.75 Aligned_cols=44 Identities=11% Similarity=-0.064 Sum_probs=27.8
Q ss_pred HHHhhhhHHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008158 461 AFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITI 504 (575)
Q Consensus 461 ~~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~lg~~l~~~l~~~ 504 (575)
+....+.-.++.....++.++-|..........|-+++..+.-.
T Consensus 133 ATQDIAVDGWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFla 176 (544)
T PF13000_consen 133 ATQDIAVDGWALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLA 176 (544)
T ss_pred ccCCceeehhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHh
Confidence 44455566666677778888877766555666666666544433
No 284
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=71.26 E-value=43 Score=32.16 Aligned_cols=62 Identities=18% Similarity=0.194 Sum_probs=47.0
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhHHhhhccCCc-hhHHHHHHHHHH-HHHHHHHHHHHHHHHhhh
Q 008158 446 VFWLAPQLILMGFCEAFNIIGQIEFFNKQFPD-HMKSIANSLLFC-SFGFASYLSSLLITIVHG 507 (575)
Q Consensus 446 ~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~-~~rg~~~g~~~~-~~~lg~~l~~~l~~~i~~ 507 (575)
.+.++......|++.+...+....+..+..|+ ..|+...+.... ...++..+++.+.+.+..
T Consensus 94 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (338)
T COG0477 94 LALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLG 157 (338)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555557888889999999999999998 678888888777 566777777766665544
No 285
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=71.14 E-value=5.7 Score=38.98 Aligned_cols=75 Identities=16% Similarity=0.241 Sum_probs=54.0
Q ss_pred ccCCCcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHH---------hhhcc
Q 008158 11 KKPGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFI---------SDTYI 81 (575)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~l---------aD~~~ 81 (575)
|.-++|+.+.+.+. ++...+.-.-..+++..|+. +.+.++.+..++..+..+...+..++.|.. .|| +
T Consensus 12 kPigr~svf~yGvG-HmlNDitAScWFTYlllflt-qiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr-~ 88 (412)
T KOG4830|consen 12 KPIGRTSVFAYGVG-HMLNDITASCWFTYLLLFLT-QIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDR-I 88 (412)
T ss_pred Ccccceeeeeechh-HHHhhHHHHHHHHHHHHHHH-HhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhh-h
Confidence 34556666666554 44444444556788888887 456788888899999999999999998744 688 5
Q ss_pred cchHHHH
Q 008158 82 GRFKTIT 88 (575)
Q Consensus 82 Grr~~~~ 88 (575)
|||+...
T Consensus 89 G~~~~wh 95 (412)
T KOG4830|consen 89 GRRMSWH 95 (412)
T ss_pred cceeeee
Confidence 9998653
No 286
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=69.41 E-value=66 Score=33.36 Aligned_cols=97 Identities=7% Similarity=-0.029 Sum_probs=55.5
Q ss_pred chhHHHHHHHHHHHHHHHHHhhhhHHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCCCC
Q 008158 444 VSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDID 523 (575)
Q Consensus 444 ~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~~~~~~ 523 (575)
.++|+.-.+++++..-..+..+....-+.+....+.-|...|++.+.. -++-+.+.-.+.|..+.+-.. -.+
T Consensus 324 ~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvA---l~lQsilT~iVvd~~g~~L~i-----r~Q 395 (433)
T KOG3810|consen 324 QHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFVA---LILQSILTLIVVDDRGLGLDI-----RTQ 395 (433)
T ss_pred cceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHH---HHHHHhheEEEEcccccCCCc-----cee
Confidence 467777888888888777877777766666666676777777665433 333333333333422111100 000
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHH
Q 008158 524 AGRLDYFYFLIAGLGGLNIVYFLYC 548 (575)
Q Consensus 524 ~~~~~~~f~~~a~i~~v~~i~~~~~ 548 (575)
-.-+..+|.+.+++.++.....+..
T Consensus 396 ~~~Y~~Yf~v~~~i~~~~~~~~~~~ 420 (433)
T KOG3810|consen 396 FVVYSSYFIVLGVIFLIGFGIEYLM 420 (433)
T ss_pred EEEEeehHHHHHHHHHHHHHHHHHH
Confidence 0124457888888888876654443
No 287
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=68.90 E-value=51 Score=32.85 Aligned_cols=140 Identities=11% Similarity=0.116 Sum_probs=84.4
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHHhhhcccch--HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcch
Q 008158 54 SAANILNIWGGVTNFAPLLGAFISDTYIGRF--KTITFASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSM 131 (575)
Q Consensus 54 ~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (575)
-.|.+.+.+.+...+++-+..++..|- ..| ..+.+..++.++...+..+..... ++..
T Consensus 283 PhGfiFatFMlASmLGSSla~Rl~s~s-~~~ve~ymqivf~vs~a~l~Lpilt~~vs-------------------P~ke 342 (454)
T KOG4332|consen 283 PHGFIFATFMLASMLGSSLASRLLSRS-SPKVESYMQIVFLVSIAALLLPILTSSVS-------------------PSKE 342 (454)
T ss_pred CchhHHHHHHHHHHHhhHHHHHHHhcC-CcccchHHHHHHHHHHHHHHHHHHHhccC-------------------CCcC
Confidence 368889999999998888888887763 322 244444444433333322221100 1112
Q ss_pred hhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhhhccccccchhHhHHH
Q 008158 132 QLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIP 211 (575)
Q Consensus 132 ~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~ 211 (575)
+...-+++..+.-.+.|.++|.+.-+=....|+++ |+..++++..-.|+-.-++....--=....+-|..|.+.
T Consensus 343 s~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEea------rstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~ic 416 (454)
T KOG4332|consen 343 SPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEA------RSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGIC 416 (454)
T ss_pred CchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHH------HhhhhhheechhhHhhhhhheecccccCccccchhhhhh
Confidence 33344667777788889999998888888888887 999999988887776655432210001123455667665
Q ss_pred HHHHHHHH
Q 008158 212 TVLMIGAI 219 (575)
Q Consensus 212 ~~~~~i~~ 219 (575)
-+...++.
T Consensus 417 S~~~~~a~ 424 (454)
T KOG4332|consen 417 SAFLFVAS 424 (454)
T ss_pred HHHHHHHH
Confidence 55444443
No 288
>PRK03612 spermidine synthase; Provisional
Probab=65.23 E-value=86 Score=34.55 Aligned_cols=53 Identities=8% Similarity=0.080 Sum_probs=33.5
Q ss_pred HHHHHHHHHHhhhhHHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008158 454 ILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHG 507 (575)
Q Consensus 454 ~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~ 507 (575)
++.++..+...|.......+... +.-+...|-....+.+|+.+|+.+.++++-
T Consensus 118 ~~~~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 118 LLIGLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 34456666667776665543322 123455566667788888888888887664
No 289
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=63.46 E-value=73 Score=26.75 Aligned_cols=37 Identities=16% Similarity=0.039 Sum_probs=30.8
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q 008158 474 QFPDHMKSIANSLLFCSFGFASYLSSLLITIVHGVTA 510 (575)
Q Consensus 474 ~~p~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~ 510 (575)
....+.++.++++-...-.+++++..+..+|++|.+.
T Consensus 34 ~~a~s~k~~~~a~klssefIsGilVGa~iG~llD~~a 70 (116)
T COG5336 34 SSAESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFA 70 (116)
T ss_pred ccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3446778889998888889999999999999998753
No 290
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=61.83 E-value=20 Score=38.42 Aligned_cols=56 Identities=11% Similarity=0.053 Sum_probs=44.4
Q ss_pred hHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhh
Q 008158 133 LGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTV 194 (575)
Q Consensus 133 ~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v 194 (575)
-+..++..++.|+..|-.......+..+..+++| |..+-.+...+.++|-.+|..+
T Consensus 372 d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e------~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 372 DAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHE------REVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred cHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 3556677888999999988888888888877766 8888888888888888877654
No 291
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=61.49 E-value=26 Score=29.34 Aligned_cols=37 Identities=8% Similarity=-0.120 Sum_probs=24.7
Q ss_pred HHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHH
Q 008158 64 GVTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLT 100 (575)
Q Consensus 64 ~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~ 100 (575)
+...+.....||+.|||+|-++-.++.+++...+.-.
T Consensus 53 IsGilVGa~iG~llD~~agTsPwglIv~lllGf~AG~ 89 (116)
T COG5336 53 ISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGV 89 (116)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 3333444455999999999999877766665544333
No 292
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=48.15 E-value=1.6e+02 Score=29.09 Aligned_cols=26 Identities=19% Similarity=0.184 Sum_probs=13.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHH
Q 008158 477 DHMKSIANSLLFCSFGFASYLSSLLI 502 (575)
Q Consensus 477 ~~~rg~~~g~~~~~~~lg~~l~~~l~ 502 (575)
+-+|..+.|+.....+..+.+.+...
T Consensus 74 pii~~iGLglg~liW~s~n~l~Gw~~ 99 (254)
T PF07857_consen 74 PIIKTIGLGLGMLIWGSVNCLTGWAS 99 (254)
T ss_pred hHhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 44555666665555555555544333
No 293
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=48.07 E-value=3.6e+02 Score=28.49 Aligned_cols=85 Identities=8% Similarity=-0.058 Sum_probs=46.6
Q ss_pred chhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHH
Q 008158 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (575)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~ 96 (575)
+..+++-+..+..+.+--..-.....|+.+-.|=|-.-.+..-.+-.....+..++-|-..|+ ..|+|++...+.+.-+
T Consensus 27 ~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg-~sr~Kvi~~~L~lqNl 105 (503)
T KOG2601|consen 27 STVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDG-MSRVKVIQTWLLLQNL 105 (503)
T ss_pred ceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcc-hhHHHHHHHHHhhccH
Confidence 344455566666555544444445566654444222222222223333444555556777899 5999999888776544
Q ss_pred HHHHHH
Q 008158 97 GMLTVT 102 (575)
Q Consensus 97 ~~~~~~ 102 (575)
+.+.++
T Consensus 106 Sv~vag 111 (503)
T KOG2601|consen 106 SVIVAG 111 (503)
T ss_pred HHHHHH
Confidence 444433
No 294
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=47.71 E-value=81 Score=22.77 Aligned_cols=37 Identities=8% Similarity=0.069 Sum_probs=24.1
Q ss_pred HHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHH
Q 008158 61 IWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILG 97 (575)
Q Consensus 61 ~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~ 97 (575)
.......+.....|+..|+++|.++..++..++..+.
T Consensus 8 ~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~~ 44 (55)
T PF09527_consen 8 FTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGIA 44 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 3344455556677899999899977766555554433
No 295
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=47.05 E-value=60 Score=29.23 Aligned_cols=49 Identities=18% Similarity=0.206 Sum_probs=31.4
Q ss_pred hHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHH
Q 008158 133 LGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILI 190 (575)
Q Consensus 133 ~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~ 190 (575)
...+++...+.|+|.-+ ..+..++...++++ -|++++|-.+-.|++-..
T Consensus 97 ~~~~~~S~~~Fg~gllG---isYGilSaSWD~~r------~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 97 WAVLLVSLVFFGLGLLG---ISYGILSASWDPER------EGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred hHHHHHHHHHHHHHHHh---hhhhhcccccCCCC------CCCcccHHHHHHhHHHHH
Confidence 34455555555555443 34555666777765 699999988888887653
No 296
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=44.67 E-value=53 Score=34.67 Aligned_cols=130 Identities=11% Similarity=0.067 Sum_probs=73.1
Q ss_pred hHHHHHHHHhhhhCC---ChhhHHHHHHH-HHHHHHHHhhhhHHHhhhcccchHHHHHHHH-HHHHHHHHHHHHhhcCCC
Q 008158 36 LLANFMVYLLKEYHM---NQTSAANILNI-WGGVTNFAPLLGAFISDTYIGRFKTITFASI-AAILGMLTVTLTAWLPQL 110 (575)
Q Consensus 36 ~~~~l~~yl~~~l~~---~~~~~~~i~~~-~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~-l~~~~~~~~~~~~~~~~~ 110 (575)
-...+|.+..+..+- +.--.-..... |.+...+|.+.+.++-++ +||+....... +..+-.+.+......|..
T Consensus 262 TLsiFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~--~~r~l~i~v~lR~lfiPlF~~cn~~~~~v~ 339 (406)
T KOG1479|consen 262 TLSIFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWP--DPRKLTIPVLLRLLFIPLFLLCNYPPLPVV 339 (406)
T ss_pred eeEecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCC--CCceehHHHHHHHHHHHHHHHhccCCCCce
Confidence 333556666543321 22333344455 778888888887887776 45554433222 222222222221112211
Q ss_pred CCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHH
Q 008158 111 HPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILI 190 (575)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~ 190 (575)
. .+-+++++.-.+.|+..|=..++...+..+..|+++ +..+-.+.......|...
T Consensus 340 ~-------------------~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e------~e~aG~~m~~fl~~Gl~~ 394 (406)
T KOG1479|consen 340 F-------------------ESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSE------KEAAGNLMVFFLVGGLAL 394 (406)
T ss_pred e-------------------cCchHHHHHHHHHHhccchHhhheehhcCCCCChHH------HHHHHHHHHHHHHHHHHH
Confidence 1 144667888888999999999999998888888776 444444444444445444
Q ss_pred Hh
Q 008158 191 TQ 192 (575)
Q Consensus 191 ~~ 192 (575)
|.
T Consensus 395 G~ 396 (406)
T KOG1479|consen 395 GS 396 (406)
T ss_pred hh
Confidence 43
No 297
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=44.41 E-value=2.9e+02 Score=28.56 Aligned_cols=71 Identities=15% Similarity=0.068 Sum_probs=46.0
Q ss_pred HHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCccCCCcchhhHHHHHHHHHHH
Q 008158 65 VTNFAPLLGAFISDTYIGRFKTITFASIAAILGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLS 144 (575)
Q Consensus 65 ~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g 144 (575)
......++.+.+..+ +|-|.++.++....... .+.++.. .+..++..-...|
T Consensus 70 ~l~~s~m~~~~~Ir~-~g~K~tm~lav~~Y~ly-----iA~Nl~p----------------------r~~tlVPa~~~~G 121 (390)
T KOG3097|consen 70 SLIDSSMFMPLLIRF-LGTKWTMVLAVFPYALY-----IAANLEP----------------------RYETLVPAGLVLG 121 (390)
T ss_pred HHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHH-----HHhhcch----------------------hHHhhccHHHhhc
Confidence 334444444567777 69999997665544322 2222221 4555788888899
Q ss_pred HhccCCccccccccccCCC
Q 008158 145 IGTGGIRPCSIPFGVDQFD 163 (575)
Q Consensus 145 ~g~g~~~~~~~~~~~~~~~ 163 (575)
+|++...+.--+|+++.-.
T Consensus 122 ~aa~p~W~SkgtYlT~~g~ 140 (390)
T KOG3097|consen 122 MAAGPIWASKGTYLTPMGQ 140 (390)
T ss_pred cccccccccCcceecHHHH
Confidence 9999998887777776544
No 298
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=43.33 E-value=3.4e+02 Score=27.07 Aligned_cols=24 Identities=17% Similarity=0.158 Sum_probs=15.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHH
Q 008158 477 DHMKSIANSLLFCSFGFASYLSSL 500 (575)
Q Consensus 477 ~~~rg~~~g~~~~~~~lg~~l~~~ 500 (575)
+..++...|+.....++...++..
T Consensus 194 ~~~~nil~G~~w~ignl~~~is~~ 217 (269)
T PF06800_consen 194 KSWKNILTGLIWGIGNLFYLISAQ 217 (269)
T ss_pred chHHhhHHHHHHHHHHHHHHHhHH
Confidence 456677777776666666666554
No 299
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=42.65 E-value=4.9e+02 Score=28.46 Aligned_cols=49 Identities=10% Similarity=-0.092 Sum_probs=41.0
Q ss_pred HHHHHhhhhHHhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008158 459 CEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHG 507 (575)
Q Consensus 459 g~~~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~ 507 (575)
|...+.-.-+.++.|..+.++-.+..++.....++|.++++.+..++.+
T Consensus 157 gsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 157 GSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444568899999999999999999999999999999998887765
No 300
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=42.18 E-value=85 Score=33.05 Aligned_cols=47 Identities=13% Similarity=0.077 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHhhhhHHhhhccCCchhHHHHHHHHHHHHHHHHHHHH
Q 008158 453 LILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSS 499 (575)
Q Consensus 453 ~~l~g~g~~~~~~~~~~~~~~~~p~~~rg~~~g~~~~~~~lg~~l~~ 499 (575)
+++.-+.-+....+.-.++.....++.-|-+..........|-+++.
T Consensus 140 f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~ 186 (510)
T KOG3574|consen 140 FLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGN 186 (510)
T ss_pred HHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhc
Confidence 34445555566677777777777777766665544444444444443
No 301
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=40.50 E-value=2.1e+02 Score=29.51 Aligned_cols=21 Identities=29% Similarity=0.243 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHHHHHHhHh
Q 008158 410 RIGIGMIFSILSMIVAGLVER 430 (575)
Q Consensus 410 ~i~ig~~~~~~~~~~~~~~~~ 430 (575)
.-.+|++...++.+...+.+.
T Consensus 200 lg~~Glfg~ii~~iq~~ile~ 220 (334)
T PF06027_consen 200 LGMLGLFGFIISGIQLAILER 220 (334)
T ss_pred HHHHHHHHHHHHHHHHHheeh
Confidence 345566666666555555554
No 302
>PF12606 RELT: Tumour necrosis factor receptor superfamily member 19; InterPro: IPR022248 The members of tumor necrosis factor receptor (TNFR) superfamily have been designated as the "guardians of the immune system" due to their roles in immune cell proliferation, differentiation, activation, and death (apoptosis). RELT (receptor expressed in lymphoid tissues) is a member of the TNFR superfamily. The messenger RNA of RELT is especially abundant in hematologic tissues such as spleen, lymph node, and peripheral blood leukocytes as well as in leukemias and lymphomas. RELT is able to activate the NF-kappaB pathway and selectively binds tumor necrosis factor receptor-associated factor 1 []. RELT like proteins 1 and 2 (RELL1 and RELL2) are two RELT homologues that bind to RELT. The expression of RELL1 at the mRNA level is ubiquitous, whereas expression of RELL2 mRNA is more restricted to particular tissues [].
Probab=33.01 E-value=97 Score=22.19 Aligned_cols=7 Identities=43% Similarity=0.890 Sum_probs=3.1
Q ss_pred Hhhcccc
Q 008158 549 ARRYRYK 555 (575)
Q Consensus 549 ~~~~~~~ 555 (575)
.+++.+|
T Consensus 24 ~K~ygYk 30 (50)
T PF12606_consen 24 LKAYGYK 30 (50)
T ss_pred hhccccc
Confidence 4444444
No 303
>PF03606 DcuC: C4-dicarboxylate anaerobic carrier; InterPro: IPR018385 Escherichia coli contains four different secondary carriers (DcuA, DcuB, DcuC, and DctA) for C4-dicarboxylates [, , , ] DcuA is used for aerobic growth on C4-dicarboxylates [, ], whereas the Dcu carriers (encoded by the dcuA, dcuB, and dcuC genes) are used under anaerobic conditions and form a distinct family of carriers [, , , , , ]. Each of the Dcu carriers is able to catalyze the uptake, antiport, and possibly also efflux of C4-dicarboxylates. DcuB is the major C4-dicarboxylate carrier for fumarate respiration with high fumarate-succinate exchange activity. It is synthesized only in the absence of oxygen and nitrate and in the presence of C4-dicarboxylates [, , , ]. DcuA is expressed constitutively in aerobic and anaerobic growth and can substitute for DcuB [, ]. These proteins are members of the C4-dicarboxylate Uptake C (DcuC) family. DcuC has 12 GES predicted transmembrane regions, is induced only under anaerobic conditions, and is not repressed by glucose. DcuC may therefore function as a succinate efflux system during anaerobic glucose fermentation. However, when overexpressed, it can replace either DcuA or DcuB in catalyzing fumarate-succinate exchange and fumarate uptake [, ]. DcuC shows the same transport modes as DcuA and DcuB (exchange, uptake, and presumably efflux of C4-dicarboxylates) [].; GO: 0016021 integral to membrane
Probab=30.74 E-value=3.5e+02 Score=29.27 Aligned_cols=24 Identities=13% Similarity=0.115 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHHHHHHhhccccc
Q 008158 533 LIAGLGGLNIVYFLYCARRYRYKS 556 (575)
Q Consensus 533 ~~a~i~~v~~i~~~~~~~~~~~~~ 556 (575)
...+..+++..+.....+|.+++.
T Consensus 203 ~~~i~~~i~~~~~~~ya~kv~~~p 226 (465)
T PF03606_consen 203 PFVIFTLIAIAYVHRYAQKVKKDP 226 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc
Confidence 333444444444444445554443
No 304
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=27.91 E-value=2.2e+02 Score=23.75 Aligned_cols=33 Identities=6% Similarity=-0.111 Sum_probs=19.8
Q ss_pred HHHHHHHhhhhHHHhhhcccchHHHHHHHHHHH
Q 008158 63 GGVTNFAPLLGAFISDTYIGRFKTITFASIAAI 95 (575)
Q Consensus 63 ~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~ 95 (575)
.++..+...+.|.-.|+.+|-++.+.+.+++..
T Consensus 52 ~v~pil~G~~lG~WLD~~~~t~~~~tl~~lllG 84 (100)
T TIGR02230 52 VAIPTLLGVAVGIWLDRHYPSPFSWTLTMLIVG 84 (100)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHH
Confidence 334444555667778887887776655444433
No 305
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=25.51 E-value=98 Score=24.27 Aligned_cols=47 Identities=13% Similarity=0.173 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHHHHHHHHHhccce
Q 008158 179 WYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKL 228 (575)
Q Consensus 179 ~~~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~ 228 (575)
+++....++++++ .+.||+.+. .+..+++.++..++++++...-.+.
T Consensus 12 l~~~il~~~~iis-fi~Gy~~q~--~~~~~~~~~~g~~~~~lv~vP~Wp~ 58 (76)
T PF06645_consen 12 LMQYILIISAIIS-FIVGYITQS--FSYTFYIYGAGVVLTLLVVVPPWPF 58 (76)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHH--HHHHHHHHHHHHHHHHhheeCCcHh
Confidence 3444555666555 456777663 5666666666555555554433333
No 306
>COG2119 Predicted membrane protein [Function unknown]
Probab=25.38 E-value=5.6e+02 Score=23.92 Aligned_cols=56 Identities=18% Similarity=0.080 Sum_probs=35.4
Q ss_pred HHHhhhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhhcccchHHHHHHHHHHHHHH
Q 008158 42 VYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILGM 98 (575)
Q Consensus 42 ~yl~~~l~~~~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~l~~~~~ 98 (575)
.-+..+.|......-..+.....+..+..+.+.++++| +--|++-..+.+++.+-.
T Consensus 123 IaLaA~~~~~~~V~~Gt~lg~~l~s~laVl~G~~ia~k-i~~r~l~~~aallFl~fa 178 (190)
T COG2119 123 IALAADYHSPWAVFAGTTLGMILASVLAVLLGKLIAGK-LPERLLRFIAALLFLIFA 178 (190)
T ss_pred HHHhhcCCCceeeehhhHHHHHHHHHHHHHHHHHHHcc-CCHHHHHHHHHHHHHHHH
Confidence 34444555432233333444556777888889999999 598887777776665443
No 307
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=24.03 E-value=1.3e+02 Score=33.58 Aligned_cols=65 Identities=15% Similarity=0.070 Sum_probs=56.9
Q ss_pred cchhhHHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhhhhhcc
Q 008158 129 NSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQ 199 (575)
Q Consensus 129 ~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v~~~l~ 199 (575)
++.+..+++.=-++.|++.........-+.-+++|++- |+.+.+++.....+|..+...+...+.
T Consensus 454 ~~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sM------kS~~~al~l~t~a~G~~lss~Lv~~v~ 518 (571)
T KOG1237|consen 454 NPMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESM------KSVATALWLLTVAVGNYLSSVLVSLVQ 518 (571)
T ss_pred CCeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45688888888999999999999999999999999987 999999999999999999988775443
No 308
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=23.18 E-value=22 Score=36.19 Aligned_cols=55 Identities=5% Similarity=0.046 Sum_probs=3.6
Q ss_pred HHHHHHHHHHHHhccCCccccccccccCCCCCCcccccchhhhhHHHHHHHHHHHHHHhhh
Q 008158 134 GVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTV 194 (575)
Q Consensus 134 ~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~~~v 194 (575)
+..++..++.|+..|-.......+..+..++++ |..+-.+...+.++|-.+|..+
T Consensus 249 ~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e------~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 249 AWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEE------RELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp ------------------HHHH---------------------------------------
T ss_pred HHHHHHHHHHHHccchhhhceeeeCCCcCCHHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 456667788999999999999998988888766 6666666666777777766544
No 309
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=21.44 E-value=6.8e+02 Score=23.44 Aligned_cols=35 Identities=11% Similarity=0.326 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHhhhhhhccccccchhHhHHHHHHHH
Q 008158 181 YTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMI 216 (575)
Q Consensus 181 ~~~~~ig~~~~~~v~~~l~~~~gw~~~f~~~~~~~~ 216 (575)
+...-++..+|-.+++++.+..+. +..+++++..+
T Consensus 168 ~~~~i~~f~~Ga~~ga~l~~~~~~-~al~~~~~~l~ 202 (209)
T PF06912_consen 168 YLLIILSFFIGAILGALLYRRLGF-WALLLPALLLL 202 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHH
Confidence 333445555555566666666664 34444444433
No 310
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=20.53 E-value=44 Score=29.19 Aligned_cols=16 Identities=6% Similarity=-0.162 Sum_probs=7.5
Q ss_pred hhHhHHHHHHHHHHHH
Q 008158 205 VIGFGIPTVLMIGAII 220 (575)
Q Consensus 205 ~~~f~~~~~~~~i~~~ 220 (575)
||++++.++++++.++
T Consensus 1 RW~l~~iii~~i~l~~ 16 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFL 16 (130)
T ss_pred CeeeHHHHHHHHHHHH
Confidence 4566655444333333
No 311
>PRK11588 hypothetical protein; Provisional
Probab=20.49 E-value=9.2e+02 Score=26.46 Aligned_cols=36 Identities=25% Similarity=0.266 Sum_probs=15.8
Q ss_pred cchhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHh
Q 008158 388 DTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLV 428 (575)
Q Consensus 388 ~~~~~~~~~r~~~r~~~~~~~~~i~ig~~~~~~~~~~~~~~ 428 (575)
|..+..+.+|+++|+ ...+.+-+++.+++-...++.
T Consensus 133 ~~~i~~l~~k~~~~~-----~llIpil~~lFsl~G~~~G~~ 168 (506)
T PRK11588 133 DNGILALIRKTRGNE-----ILFIPVLFILFSLGGAVFGMG 168 (506)
T ss_pred HHHHHHHHHHhCCCc-----EEeHHHHHHHHHHHHHHhhhh
Confidence 333444566665542 123333344444444444443
No 312
>COG1971 Predicted membrane protein [Function unknown]
Probab=20.38 E-value=5.7e+02 Score=24.00 Aligned_cols=78 Identities=17% Similarity=0.175 Sum_probs=40.4
Q ss_pred CcchhHHHHHHHHHHHHHhhhhHHHHHHHHhhhhCCChhhHHHHHHHHH-HHHHHHhhhhHHHhhhcccchHHHHHHHHH
Q 008158 15 GWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWG-GVTNFAPLLGAFISDTYIGRFKTITFASIA 93 (575)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~~~~~~~~i~~~~~-~~~~~~~~~~G~laD~~~Grr~~~~~~~~l 93 (575)
+|+....+-...-+++++.-.-.. -++.+............ +...++..++.++... +|.|.-++.+.++
T Consensus 106 ~~~~~~~laiatSidal~vG~~~a--------~lgv~i~~~av~iG~~T~il~~~G~~IG~~~g~~-~g~~ae~lgGiiL 176 (190)
T COG1971 106 NFKELILLAIATSIDALAVGVGLA--------FLGVNILLAAVAIGLITLILSALGAIIGRKLGKF-LGKYAEILGGIIL 176 (190)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhHH--------HhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHH
Confidence 366666666666666655221111 12233333333333222 2233444444444444 5788888888888
Q ss_pred HHHHHHHH
Q 008158 94 AILGMLTV 101 (575)
Q Consensus 94 ~~~~~~~~ 101 (575)
..+|.-.+
T Consensus 177 I~~G~~iL 184 (190)
T COG1971 177 IGIGVKIL 184 (190)
T ss_pred HHHHHHHH
Confidence 88876554
Done!