Query 008159
Match_columns 575
No_of_seqs 481 out of 3452
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 19:32:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008159.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008159hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pia_A Phthalate dioxygenase r 100.0 1.3E-38 4.6E-43 326.7 12.4 278 173-493 10-298 (321)
2 1qfj_A Protein (flavin reducta 100.0 3.2E-30 1.1E-34 252.0 21.4 210 173-409 4-216 (232)
3 4eh1_A Flavohemoprotein; struc 100.0 3.9E-30 1.3E-34 253.2 19.2 211 172-415 4-226 (243)
4 1tvc_A Methane monooxygenase c 100.0 3.3E-30 1.1E-34 254.9 18.4 212 173-409 12-231 (250)
5 1ep3_B Dihydroorotate dehydrog 100.0 5.7E-32 1.9E-36 269.5 5.6 200 173-409 7-211 (262)
6 2eix_A NADH-cytochrome B5 redu 100.0 3.7E-30 1.3E-34 253.4 17.1 217 173-414 13-235 (243)
7 3lo8_A Ferredoxin--NADP reduct 100.0 1.8E-29 6E-34 257.8 20.6 220 173-409 30-284 (311)
8 3vo2_A Putative uncharacterize 100.0 2.4E-29 8.4E-34 256.6 21.2 220 173-409 35-283 (310)
9 1fdr_A Flavodoxin reductase; f 100.0 4.7E-29 1.6E-33 246.3 19.6 211 173-409 6-228 (248)
10 3jqq_A Ferredoxin NADP reducta 100.0 4.1E-29 1.4E-33 255.2 18.7 217 174-409 18-299 (316)
11 1umk_A B5R, NADH-cytochrome B5 100.0 2.1E-29 7.3E-34 252.7 15.1 218 173-414 18-267 (275)
12 1krh_A Benzoate 1,2-dioxygenas 100.0 4.7E-29 1.6E-33 257.7 17.7 208 173-409 110-322 (338)
13 4fk8_A Ferredoxin--NADP reduct 100.0 2.4E-29 8.1E-34 251.8 14.0 214 172-409 20-249 (271)
14 4g1v_A Flavohemoglobin; three 100.0 1.7E-28 5.8E-33 259.2 20.6 215 172-421 150-387 (399)
15 2r6h_A NADH:ubiquinone oxidore 100.0 1.1E-28 3.7E-33 249.5 17.8 216 173-414 11-279 (290)
16 1gvh_A Flavohemoprotein; oxido 100.0 5.8E-29 2E-33 262.6 16.4 217 172-415 153-381 (396)
17 1cqx_A Flavohemoprotein; globi 100.0 2.9E-28 1E-32 257.8 19.3 215 173-415 156-387 (403)
18 1fnb_A Ferredoxin-NADP+ reduct 100.0 1.2E-27 4E-32 244.7 22.0 220 173-409 39-287 (314)
19 2qdx_A Ferredoxin reductase; o 100.0 2.1E-28 7E-33 243.0 15.4 213 173-409 5-233 (257)
20 2cnd_A NADH-dependent nitrate 100.0 3.7E-28 1.3E-32 242.9 15.0 217 172-409 13-258 (270)
21 2bgi_A Ferredoxin-NADP(H) redu 100.0 8.8E-28 3E-32 240.5 16.8 213 173-409 18-247 (272)
22 2bmw_A Ferredoxin--NADP reduct 100.0 2.9E-27 9.9E-32 240.6 20.8 221 173-409 23-277 (304)
23 2b5o_A FNR, ferredoxin--NADP r 100.0 2.8E-27 9.4E-32 249.4 20.3 220 173-409 124-375 (402)
24 2rc5_A Ferredoxin-NADP reducta 99.9 1.4E-26 4.9E-31 236.6 18.9 217 173-409 23-288 (314)
25 1ddg_A Sulfite reductase (NADP 99.9 1.7E-23 5.7E-28 217.9 11.8 186 198-409 145-343 (374)
26 3a1f_A Cytochrome B-245 heavy 99.9 6.9E-23 2.4E-27 192.5 12.4 182 267-573 1-186 (186)
27 2gpj_A Siderophore-interacting 99.9 2.2E-22 7.4E-27 198.8 13.0 196 172-408 9-211 (252)
28 4dql_A Bifunctional P-450/NADP 99.8 4.3E-20 1.5E-24 193.1 16.3 188 198-409 156-360 (393)
29 2qtl_A MSR;, methionine syntha 99.8 4.8E-20 1.6E-24 199.7 13.6 200 201-409 278-507 (539)
30 1f20_A Nitric-oxide synthase; 99.8 3.1E-19 1E-23 189.4 16.1 177 215-409 208-402 (435)
31 2bpo_A CPR, P450R, NADPH-cytoc 99.8 9.5E-20 3.3E-24 203.5 9.6 203 199-409 414-651 (682)
32 1tll_A Nitric-oxide synthase, 99.8 2.7E-19 9.1E-24 199.9 11.4 188 201-409 418-623 (688)
33 3qfs_A CPR, P450R, NADPH--cyto 99.8 1.5E-18 5E-23 184.1 14.7 179 213-409 230-426 (458)
34 3qe2_A CPR, P450R, NADPH--cyto 99.8 3.6E-18 1.2E-22 188.7 14.1 178 214-409 391-586 (618)
35 3lrx_A Putative hydrogenase; a 99.7 7.5E-18 2.6E-22 153.9 7.9 127 263-409 3-134 (158)
36 3lyu_A Putative hydrogenase; t 99.7 1.4E-17 4.9E-22 149.1 9.4 123 267-409 3-129 (142)
37 1awd_A Ferredoxin; electron tr 98.1 2.1E-08 7.1E-13 82.5 -6.8 54 440-493 11-64 (94)
38 1frd_A Heterocyst [2Fe-2S] fer 98.1 2E-08 6.7E-13 83.4 -7.2 54 440-493 15-68 (98)
39 1iue_A Ferredoxin; electron tr 98.1 2E-08 6.8E-13 83.3 -7.3 61 433-493 6-66 (98)
40 1doi_A 2Fe-2S ferredoxin; halo 98.1 2.8E-08 9.7E-13 86.3 -6.9 60 434-493 30-90 (128)
41 1frr_A Ferredoxin I; electron 98.1 2.6E-08 8.8E-13 82.1 -7.2 54 440-493 12-65 (95)
42 1jq4_A Methane monooxygenase c 98.1 3.8E-08 1.3E-12 81.6 -6.3 54 432-485 5-61 (98)
43 1wri_A Ferredoxin II, ferredox 98.1 4.4E-08 1.5E-12 80.4 -6.3 60 433-493 5-64 (93)
44 1a70_A Ferredoxin; iron-sulfur 98.1 3.2E-08 1.1E-12 81.9 -7.3 54 440-493 13-66 (97)
45 1czp_A Ferredoxin I; [2Fe-2S] 98.0 4.1E-08 1.4E-12 81.4 -7.2 53 440-492 15-67 (98)
46 1l5p_A Ferredoxin; [2Fe-2S] cl 97.7 3.4E-07 1.2E-11 75.0 -6.4 55 432-486 3-59 (93)
47 2wlb_A ETP1-FD, electron trans 97.7 2.2E-07 7.7E-12 77.7 -8.1 55 432-486 6-62 (103)
48 1xlq_A Putidaredoxin, PDX; [2F 97.7 2.8E-07 9.4E-12 77.5 -7.7 48 436-483 8-57 (106)
49 1i7h_A Ferredoxin; 2Fe-2S,elec 97.7 6.2E-07 2.1E-11 76.0 -5.8 48 439-486 15-63 (111)
50 1uwm_A Ferredoxin VI, FDVI; el 97.7 5.4E-07 1.8E-11 75.8 -6.7 50 436-485 8-59 (106)
51 2y5c_A Adrenodoxin-like protei 97.6 6.3E-07 2.2E-11 75.7 -6.9 50 437-486 14-64 (109)
52 3lxf_A Ferredoxin; iron, iron- 97.6 1.1E-06 3.9E-11 73.4 -5.7 50 437-486 9-60 (104)
53 1b9r_A Protein (terpredoxin); 97.6 5.4E-07 1.9E-11 75.6 -8.0 47 436-482 8-56 (105)
54 2bt6_A Adrenodoxin 1; rutheniu 97.5 1.1E-06 3.6E-11 74.2 -6.6 50 437-486 15-67 (108)
55 3zyy_X Iron-sulfur cluster bin 97.5 1.9E-06 6.4E-11 93.6 -7.4 61 432-492 4-65 (631)
56 3ah7_A [2Fe-2S]ferredoxin; [2F 97.4 2.2E-06 7.4E-11 72.9 -5.9 44 439-482 15-59 (113)
57 3hui_A Ferredoxin; cytochrome 97.4 2.4E-06 8.3E-11 73.7 -6.2 61 424-484 16-79 (126)
58 1krh_A Benzoate 1,2-dioxygenas 97.3 4E-06 1.4E-10 85.7 -7.3 48 438-485 13-60 (338)
59 3n9z_C Adrenodoxin; cytochrome 96.8 4.1E-05 1.4E-09 65.7 -4.4 49 437-485 14-65 (123)
60 1t3q_A Quinoline 2-oxidoreduct 95.6 0.00021 7.2E-09 64.9 -6.5 51 431-482 11-63 (168)
61 3hrd_D Nicotinate dehydrogenas 91.3 0.0062 2.1E-07 54.3 -5.1 49 431-479 5-55 (160)
62 1rm6_C 4-hydroxybenzoyl-COA re 90.8 0.0079 2.7E-07 53.9 -4.9 48 431-478 4-53 (161)
63 1ffv_A CUTS, iron-sulfur prote 90.4 0.0089 3E-07 53.6 -5.0 48 431-478 5-54 (163)
64 2bs2_B Quinol-fumarate reducta 89.5 0.01 3.5E-07 57.1 -5.8 42 441-483 26-73 (241)
65 1n62_A Carbon monoxide dehydro 89.4 0.012 4.1E-07 52.9 -5.0 48 431-478 5-54 (166)
66 2pia_A Phthalate dioxygenase r 88.1 0.29 1E-05 48.9 3.6 37 509-550 178-214 (321)
67 4eh1_A Flavohemoprotein; struc 87.4 0.17 5.8E-06 48.1 1.3 37 510-552 188-224 (243)
68 4g1v_A Flavohemoglobin; three 86.6 0.39 1.3E-05 49.5 3.7 37 510-551 342-378 (399)
69 4fk8_A Ferredoxin--NADP reduct 86.1 0.4 1.4E-05 46.4 3.2 26 527-552 226-251 (271)
70 3lyu_A Putative hydrogenase; t 85.7 0.34 1.2E-05 42.1 2.2 22 531-552 110-131 (142)
71 2wdq_B Succinate dehydrogenase 84.9 0.032 1.1E-06 53.5 -5.3 41 441-482 23-70 (238)
72 1qfj_A Protein (flavin reducta 84.8 0.38 1.3E-05 45.3 2.3 23 528-550 193-216 (232)
73 1tvc_A Methane monooxygenase c 83.8 0.53 1.8E-05 44.9 2.9 23 529-551 210-232 (250)
74 1kf6_B Fumarate reductase iron 83.7 0.03 1E-06 53.9 -6.1 41 441-482 26-72 (243)
75 3i9v_3 NADH-quinone oxidoreduc 81.7 0.042 1.4E-06 62.1 -6.8 46 432-479 2-53 (783)
76 3lrx_A Putative hydrogenase; a 80.8 0.71 2.4E-05 40.8 2.3 22 531-552 115-136 (158)
77 3jqq_A Ferredoxin NADP reducta 79.4 0.69 2.4E-05 46.0 1.9 24 528-551 277-300 (316)
78 2r6h_A NADH:ubiquinone oxidore 78.9 0.94 3.2E-05 44.2 2.7 24 528-551 254-277 (290)
79 3lo8_A Ferredoxin--NADP reduct 78.8 0.95 3.3E-05 44.7 2.8 44 509-552 240-286 (311)
80 3nvw_A Xanthine dehydrogenase/ 78.2 0.11 3.6E-06 46.4 -3.9 49 431-479 4-55 (164)
81 2w3s_A Xanthine dehydrogenase; 77.7 0.14 4.7E-06 54.0 -4.0 47 432-478 3-51 (462)
82 3vo2_A Putative uncharacterize 77.7 1.1 3.8E-05 44.3 2.9 27 526-552 259-285 (310)
83 1gvh_A Flavohemoprotein; oxido 76.8 1.2 4.3E-05 45.6 3.0 23 529-551 356-378 (396)
84 1cqx_A Flavohemoprotein; globi 75.5 1.5 5.1E-05 45.1 3.2 39 509-551 346-384 (403)
85 2bgi_A Ferredoxin-NADP(H) redu 74.4 1.5 5.1E-05 42.4 2.7 24 528-551 225-248 (272)
86 2gpj_A Siderophore-interacting 73.5 1.6 5.3E-05 41.8 2.6 22 528-549 190-211 (252)
87 2eix_A NADH-cytochrome B5 redu 70.4 2.9 9.8E-05 39.4 3.6 24 528-551 210-233 (243)
88 2bmw_A Ferredoxin--NADP reduct 70.2 3.3 0.00011 40.6 4.1 23 528-550 255-277 (304)
89 1fdr_A Flavodoxin reductase; f 69.3 2.6 8.9E-05 39.8 3.1 24 528-551 205-229 (248)
90 2h88_B Succinate dehydrogenase 69.2 0.3 1E-05 47.0 -3.7 39 443-482 35-80 (252)
91 2qdx_A Ferredoxin reductase; o 68.8 2.7 9.3E-05 40.0 3.1 24 528-551 211-234 (257)
92 3vr8_B Iron-sulfur subunit of 67.6 0.31 1E-05 47.7 -4.0 36 443-478 59-101 (282)
93 1dgj_A Aldehyde oxidoreductase 67.4 0.33 1.1E-05 55.6 -4.4 47 432-478 4-52 (907)
94 1vlb_A Aldehyde oxidoreductase 67.4 0.31 1.1E-05 55.8 -4.6 47 432-478 4-52 (907)
95 2b5o_A FNR, ferredoxin--NADP r 66.5 4.4 0.00015 41.6 4.3 23 529-551 354-376 (402)
96 3c8y_A Iron hydrogenase 1; dit 64.5 0.17 5.8E-06 55.0 -7.2 45 433-479 3-54 (574)
97 1fnb_A Ferredoxin-NADP+ reduct 63.7 4.6 0.00016 39.7 3.7 23 528-550 265-287 (314)
98 3s2u_A UDP-N-acetylglucosamine 54.0 8.5 0.00029 38.7 3.8 26 284-309 3-30 (365)
99 1umk_A B5R, NADH-cytochrome B5 48.2 5.3 0.00018 38.3 1.1 23 528-550 241-264 (275)
100 1ep3_B Dihydroorotate dehydrog 48.1 7.1 0.00024 37.2 1.9 33 513-550 179-211 (262)
101 1f20_A Nitric-oxide synthase; 48.0 6.4 0.00022 40.9 1.7 39 173-211 32-77 (435)
102 3a1f_A Cytochrome B-245 heavy 45.2 10 0.00034 33.6 2.4 22 386-409 147-168 (186)
103 2rc5_A Ferredoxin-NADP reducta 42.2 18 0.00061 35.3 3.9 20 532-551 269-289 (314)
104 1ddg_A Sulfite reductase (NADP 38.6 12 0.00041 37.9 2.0 38 174-211 14-57 (374)
105 2cnd_A NADH-dependent nitrate 36.1 11 0.00037 36.0 1.1 23 528-550 235-258 (270)
106 1tll_A Nitric-oxide synthase, 33.3 14 0.00049 40.7 1.6 38 174-211 254-298 (688)
107 3qfs_A CPR, P450R, NADPH--cyto 26.7 24 0.00082 36.8 1.9 38 174-211 65-107 (458)
108 2qtl_A MSR;, methionine syntha 25.6 25 0.00085 37.5 1.8 38 174-211 117-160 (539)
109 3unc_A Xanthine dehydrogenase/ 25.5 4.5 0.00015 48.1 -4.4 48 431-478 5-55 (1332)
110 2bpo_A CPR, P450R, NADPH-cytoc 24.9 27 0.00093 38.4 2.0 38 174-211 262-304 (682)
111 4gd3_A NI/Fe-hydrogenase 1 B-t 24.8 2.7E+02 0.0093 25.5 8.9 22 51-72 59-80 (235)
112 3qe2_A CPR, P450R, NADPH--cyto 23.8 29 0.00098 37.7 1.9 37 174-210 225-266 (618)
113 1kqf_C FDH-N gamma, formate de 23.4 4E+02 0.014 23.8 12.3 23 48-70 50-72 (217)
No 1
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=100.00 E-value=1.3e-38 Score=326.68 Aligned_cols=278 Identities=13% Similarity=0.150 Sum_probs=213.9
Q ss_pred ceeEEEEEEecCCeEEEEEecCCC---CcccCCeEEEEEeCCCCCCccccCccccCCCCCCCcEEEEEEeC--CC-ccHH
Q 008159 173 ETCILSARVFPSKAIELILPKHAG---LKFTPTSVIFMKIPSISKFQWHSFSITSSSSVDDQTMSLIVKCD--GE-WTSS 246 (575)
Q Consensus 173 ~~~v~~~~~~~~~~~~l~~~~~~~---~~~~pGQ~v~l~~p~~~~~~~hpfSI~s~p~~~~~~l~l~Ik~~--G~-~T~~ 246 (575)
..+|++++.++++++++++..+.. ..|+||||+.|++|.. ++|||||+|.|. +++.++|.||+. |. +|++
T Consensus 10 ~~~V~~~~~~t~~~~~l~l~~~~~~~~~~~~pGQ~v~l~~~~g---~~R~ySi~s~~~-~~~~l~i~Vk~~~~G~g~S~~ 85 (321)
T 2pia_A 10 RLKIASKEKIARDIWSFELTDPQGAPLPPFEAGANLTVAVPNG---SRRTYSLCNDSQ-ERNRYVIAVKRDSNGRGGSIS 85 (321)
T ss_dssp EEEEEEEEEEETTEEEEEEECTTCCCCCCCCTTCEEEEECTTS---CEEEEECCSCTT-CCSEEEEEEECCTTSCSHHHH
T ss_pred EEEEEEEEEcCCCEEEEEEEcCCCCcCCCCCCCCEEEEECCCC---CcEEEEeCCCCC-CCCeEEEEEEEecCCcchhHH
Confidence 467899999999999999987653 4899999999999853 899999999986 567899999974 65 8999
Q ss_pred HHHHHHhcccCCcccCcceeEEEeCCCCCCCCCcCCCCeEEEEEeCCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEe
Q 008159 247 LYQMIHAELDSDADQMRCIPVAIEGPYGPATMDFLRYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVI 326 (575)
Q Consensus 247 L~~~~~~~~~~~~~~~~g~~v~v~GPyG~~~~~~~~~~~vvlIagGiGITP~lsil~~l~~~~~~~~~~~~~~v~li~~~ 326 (575)
|++.++ +|+.+.|.||+|.|.++. .+++++||||||||||++||++++...+ ..+++|+|++
T Consensus 86 L~~~l~----------~Gd~v~v~gP~g~f~l~~-~~~~~vliagG~GItP~~s~l~~l~~~~-------~~~v~l~~~~ 147 (321)
T 2pia_A 86 FIDDTS----------EGDAVEVSLPRNEFPLDK-RAKSFILVAGGIGITPMLSMARQLRAEG-------LRSFRLYYLT 147 (321)
T ss_dssp HHHSCC----------TTCEEEECCCBCCSCCCT-TCSEEEEEEEGGGHHHHHHHHHHHHHHC-------SSEEEEEEEE
T ss_pred HHhcCC----------CCCEEEEeCCccccccCC-CCCCEEEEEecccHhHHHHHHHHHHHcC-------CCcEEEEEEE
Confidence 997666 799999999999987653 4789999999999999999999998752 2789999999
Q ss_pred CCcchhhhHHhHHHHhhhccCCCceeEEEEEEeCCCCCcchhhhhhchhhhhhhhccCCCceeEEecCCchHHHHHHHHH
Q 008159 327 KSSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSSVTVREVLNDLSLVRAVRFGTQSNYAVNGLESLIWMAALVGI 406 (575)
Q Consensus 327 r~~~~l~~~~~l~~~l~~~~~~~~~l~~~~~vT~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vcGp~~~~~~~~v~~~ 406 (575)
|+.+++.|.+++.++. ...++++ +.++++.. .+..+.+.. . ...+...+|+|||.+ ||+++.+.
T Consensus 148 r~~~~~~~~~el~~l~-----~~~~~~~--~~~~~~~~---g~~~~~~ll--~--~~~~~~~vyvCGP~~--m~~~v~~~ 211 (321)
T 2pia_A 148 RDPEGTAFFDELTSDE-----WRSDVKI--HHDHGDPT---KAFDFWSVF--E--KSKPAQHVYCCGPQA--LMDTVRDM 211 (321)
T ss_dssp SCGGGCTTHHHHHSTT-----TTTTEEE--EECTTCTT---SCCCHHHHH--S--SCCTTEEEEEESCHH--HHHHHHHH
T ss_pred CChhhhHHHHHHhcCc-----cCCeEEE--EECCCccc---CccCHHHHh--c--ccCCCCEEEEECCHH--HHHHHHHH
Confidence 9999999999987642 1234444 44443211 011111111 1 112346799999999 99999887
Q ss_pred HHHHHHHHHHHhheE--EecCC---CcCccccccCCcccccccccCchhHHHHHHHHHHHHHhhhhhHHHHHHHHhhhhc
Q 008159 407 TSILFVIFLISLNHI--FVPVE---KKLPSEKLAAPSEKVVSKEKTPSWVADLIILSSFIIAITGSTLMAILLRWRRLKK 481 (575)
Q Consensus 407 ~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~sll~~l~~~g~~~~~~C~~G~C~~C~~~~~~g 481 (575)
+.. +....-|+ |.+.. .....++|++.+++++++++.++||||+++++|++++++|+.|.||+|++++++|
T Consensus 212 l~~----~~~~~i~~E~F~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ll~a~~~~g~~~~~~C~~G~Cg~C~~~v~~G 287 (321)
T 2pia_A 212 TGH----WPSGTVHFESFGATNTNARENTPFTVRLSRSGTSFEIPANRSILEVLRDANVRVPSSCESGTCGSCKTALCSG 287 (321)
T ss_dssp TTT----SCTTCEEEECCCCCCCCCSCCCCEEEEETTTCCEEEECTTSCHHHHHHHTTCCCCCSCSSSSSCTTEEEEEES
T ss_pred HHh----CCHhhEEEEecCCCCCCCCCCccEEEEEeCCCeEEEECCCCcHHHHHHHcCCCCCCCCCCCCCCCCEEEEecC
Confidence 654 21111122 44322 1235688888888999999999999999999999999999999999999999999
Q ss_pred CCCCCCcCCCcc
Q 008159 482 QTPPVSLNQGKA 493 (575)
Q Consensus 482 ~v~~~~~~~~~~ 493 (575)
++++.. ..+++
T Consensus 288 ~~~~~~-~~l~~ 298 (321)
T 2pia_A 288 EADHRD-MVLRD 298 (321)
T ss_dssp CEECCC-SSCCT
T ss_pred cccccc-CCCCh
Confidence 998643 33443
No 2
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1
Probab=99.97 E-value=3.2e-30 Score=252.02 Aligned_cols=210 Identities=14% Similarity=0.129 Sum_probs=169.5
Q ss_pred ceeEEEEEEecCCeEEEEEecCCCCcccCCeEEEEEeCCCCCCccccCccccCCCCCCCcEEEEEEeC--CCccHHHHHH
Q 008159 173 ETCILSARVFPSKAIELILPKHAGLKFTPTSVIFMKIPSISKFQWHSFSITSSSSVDDQTMSLIVKCD--GEWTSSLYQM 250 (575)
Q Consensus 173 ~~~v~~~~~~~~~~~~l~~~~~~~~~~~pGQ~v~l~~p~~~~~~~hpfSI~s~p~~~~~~l~l~Ik~~--G~~T~~L~~~ 250 (575)
..+|++++.+++++.++++..+..+.|+||||+.|++|. .++|||||+|.|. +++.++|.||.. |.+|+++.+.
T Consensus 4 ~~~V~~~~~~~~~~~~l~l~~~~~~~~~pGq~v~l~~~~---~~~R~ySi~s~~~-~~~~l~l~i~~~~~G~~s~~~~~~ 79 (232)
T 1qfj_A 4 SCKVTSVEAITDTVYRVRIVPDAAFSFRAGQYLMVVMDE---RDKRPFSMASTPD-EKGFIELHIGASEINLYAKAVMDR 79 (232)
T ss_dssp EEEEEEEEESSSSCEEEEEEESSCCCCCTTCEEEEESSS---SCEEEEECCSCTT-STTCEEEEEC------CCHHHHHH
T ss_pred EEEEEEEEecCCCEEEEEEecCCCCCcCCCCEEEEECCC---CceeeeecCCCCC-CCCcEEEEEEEccCCchhHHHHHh
Confidence 467889999999999999987777899999999999986 3889999999986 467899999984 5688888877
Q ss_pred HHhcccCCcccCcceeEEEeCCCCCCCCCcCCCCeEEEEEeCCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeCCcc
Q 008159 251 IHAELDSDADQMRCIPVAIEGPYGPATMDFLRYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIKSSQ 330 (575)
Q Consensus 251 ~~~~~~~~~~~~~g~~v~v~GPyG~~~~~~~~~~~vvlIagGiGITP~lsil~~l~~~~~~~~~~~~~~v~li~~~r~~~ 330 (575)
++ +|+.+.|+||+|.+..+...+++++|||||+||||+++|++++...+ ...+++|+|++|+.+
T Consensus 80 l~----------~Gd~v~v~gP~G~~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~~------~~~~v~l~~~~r~~~ 143 (232)
T 1qfj_A 80 IL----------KDHQIVVDIPHGEAWLRDDEERPMILIAGGTGFSYARSILLTALARN------PNRDITIYWGGREEQ 143 (232)
T ss_dssp HH----------HHSEEEEEEEECSCCCCSCSSSCEEEEEETTCHHHHHHHHHHHHHHC------TTCCEEEEEEESSGG
T ss_pred CC----------CCCEEEEeCCccceEeCCCCCCcEEEEEecccHhHHHHHHHHHHhcC------CCCcEEEEEeeCCHH
Confidence 77 79999999999999765445789999999999999999999998753 247899999999999
Q ss_pred hhhhHHhHHHHhhhccCCCceeEEEEEEeCCCCCcchhhhhhchhhhhhhhccCCCceeEEecCCchHHHHHHHHHH-HH
Q 008159 331 EICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSSVTVREVLNDLSLVRAVRFGTQSNYAVNGLESLIWMAALVGIT-SI 409 (575)
Q Consensus 331 ~l~~~~~l~~~l~~~~~~~~~l~~~~~vT~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vcGp~~~~~~~~v~~~~-~~ 409 (575)
++.+.+++.++..+ .++++++..++++++.+.+.+|++++....+. ...+...+|+|||.+ ||+++...+ ..
T Consensus 144 ~~~~~~el~~l~~~----~~~~~~~~~~s~~~~~~~g~~g~v~~~~~~~~-~~~~~~~vyvCGp~~--m~~~v~~~l~~~ 216 (232)
T 1qfj_A 144 HLYDLCELEALSLK----HPGLQVVPVVEQPEAGWRGRTGTVLTAVLQDH-GTLAEHDIYIAGRFE--MAKIARDLFCSE 216 (232)
T ss_dssp GCTTHHHHHHHHHH----CTTEEEEEEESSCCTTCCSEESCHHHHHHHHC-SCCTTCEEEEESCHH--HHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHH----CCCeEEEEEEcCCCCCcCCceeeHHHHHHHhc-CCccccEEEEECCHH--HHHHHHHHHHHH
Confidence 99999998876432 24688888888876655566777776544322 112346799999999 999999877 54
No 3
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor}
Probab=99.97 E-value=3.9e-30 Score=253.18 Aligned_cols=211 Identities=17% Similarity=0.224 Sum_probs=171.2
Q ss_pred CceeEEEEEEecCCeEEEEEecCC---CCcccCCeEEEEEeCCCCC--CccccCccccCCCCCCCcEEEEEEeC------
Q 008159 172 PETCILSARVFPSKAIELILPKHA---GLKFTPTSVIFMKIPSISK--FQWHSFSITSSSSVDDQTMSLIVKCD------ 240 (575)
Q Consensus 172 ~~~~v~~~~~~~~~~~~l~~~~~~---~~~~~pGQ~v~l~~p~~~~--~~~hpfSI~s~p~~~~~~l~l~Ik~~------ 240 (575)
+..+|++++.+++++.++++..+. .+.|+||||++|.+|..+. .++|||||+|.|. ++.++|+||..
T Consensus 4 ~~~~V~~~~~~~~~~~~~~l~~~~~~~~~~~~pGq~v~l~~~~~~~~~~~~R~ySi~s~~~--~~~~~i~vk~~~~~~~~ 81 (243)
T 4eh1_A 4 RTFVVREKQVESAYVTSFVLVPADGGAVLDYQPGQYIGIEVTPEGSDYREIRQYSLSHASN--GREYRISVKREGVGSDN 81 (243)
T ss_dssp EEEEEEEEEECSSSEEEEEEEESSCSCCCCCCTTCEEEEEECCSSCSSCEEEEEEBCSCCC--SSCEEEEEECTTTTSSS
T ss_pred EEEEEEEEEEcCCCeEEEEEEeCCCCcCCCcCCCCEEEEEEecCCCccccceeeEeccCCC--CCeEEEEEEEeecCCCC
Confidence 356789999999999999998764 3789999999999987553 2689999999884 57899999998
Q ss_pred -CCccHHHHHHHHhcccCCcccCcceeEEEeCCCCCCCCCcCCCCeEEEEEeCCChhhHHHHHHHHHHhhccCCCCCCce
Q 008159 241 -GEWTSSLYQMIHAELDSDADQMRCIPVAIEGPYGPATMDFLRYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSK 319 (575)
Q Consensus 241 -G~~T~~L~~~~~~~~~~~~~~~~g~~v~v~GPyG~~~~~~~~~~~vvlIagGiGITP~lsil~~l~~~~~~~~~~~~~~ 319 (575)
|.+|++|++.++ +|+++.|+||||.+.++ ..+++++|||||+||||+++|++++..++ ..+
T Consensus 82 ~G~~S~~l~~~l~----------~G~~v~v~gP~G~~~~~-~~~~~~vliagGtGitp~~~~l~~l~~~~------~~~- 143 (243)
T 4eh1_A 82 PGLVSHYLHNNVK----------VGDSVKLYAPAGDFFYV-ERERPVVLISAGVGATPMQAILHTLAKQN------KSG- 143 (243)
T ss_dssp CCHHHHHHHHHCC----------TTCEEEEEEEECSCCCC-CCSSCEEEEEEGGGHHHHHHHHHHHHHTT------CCS-
T ss_pred CCeehhHHHhcCC----------CCCEEEEEccCcccCcC-CCCCCEEEEEccccHHHHHHHHHHHHHcC------CCe-
Confidence 889999987766 79999999999999876 67899999999999999999999998753 124
Q ss_pred EEEEEEeCCcchhhhHHhHHHHhhhccCCCceeEEEEEEeCCCCCcchhhhhhchhhhhhhhccCCCceeEEecCCchHH
Q 008159 320 VQLIYVIKSSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSSVTVREVLNDLSLVRAVRFGTQSNYAVNGLESLIW 399 (575)
Q Consensus 320 v~li~~~r~~~~l~~~~~l~~~l~~~~~~~~~l~~~~~vT~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vcGp~~~~~ 399 (575)
++++|++|+.+++.+.+++.++..+ . ++++++++++++..+. .+|++++... .. ..+...+|+|||.+ |
T Consensus 144 v~l~~~~r~~~~~~~~~el~~l~~~----~-~~~~~~~~s~~~~~~~-~~g~~~~~~~--~~-~~~~~~vyvCGp~~--m 212 (243)
T 4eh1_A 144 VTYLYACNSAKEHTFAQETAQLIAQ----Q-GWMQQVWYRDESADDV-LQGEMQLAEL--IL-PIEDGDFYLCGPIG--F 212 (243)
T ss_dssp EEEEEEESSGGGCTTHHHHHHHHHH----H-TCEEEEEESSCCCTTC-EESSCCCTTS--CC-CTTTCEEEEEECHH--H
T ss_pred EEEEEEeCChhhhhHHHHHHHHHHh----C-CeEEEEEEccCCCccc-ccCCccHHHe--ec-cCCCcEEEEECCHH--H
Confidence 9999999999999999999876432 1 6788888887654322 5677765543 11 12457899999999 9
Q ss_pred HHHHHHHHHHHHHHHH
Q 008159 400 MAALVGITSILFVIFL 415 (575)
Q Consensus 400 ~~~v~~~~~~~~~~~~ 415 (575)
|++++..+.. .|+.
T Consensus 213 ~~~v~~~l~~--~g~~ 226 (243)
T 4eh1_A 213 MQYVVKQLLA--LGVD 226 (243)
T ss_dssp HHHHHHHHHH--HTCC
T ss_pred HHHHHHHHHH--cCCC
Confidence 9999999887 5553
No 4
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2
Probab=99.97 E-value=3.3e-30 Score=254.87 Aligned_cols=212 Identities=16% Similarity=0.262 Sum_probs=172.3
Q ss_pred ceeEEEEEEecCCeEEEEEec-C-C----CCcccCCeEEEEEeCCCCCCccccCccccCCCCCCCcEEEEEEeC--CCcc
Q 008159 173 ETCILSARVFPSKAIELILPK-H-A----GLKFTPTSVIFMKIPSISKFQWHSFSITSSSSVDDQTMSLIVKCD--GEWT 244 (575)
Q Consensus 173 ~~~v~~~~~~~~~~~~l~~~~-~-~----~~~~~pGQ~v~l~~p~~~~~~~hpfSI~s~p~~~~~~l~l~Ik~~--G~~T 244 (575)
..+|++++.+++++.++++.. + . .+.|+||||+.|++|.. .++|||||+|.|. +++.++|+||.. |.+|
T Consensus 12 ~~~V~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~pGQ~v~l~~~~~--~~~R~ySi~s~~~-~~~~l~i~vk~~~~G~~s 88 (250)
T 1tvc_A 12 EAEVVGLNWVSSNTVQFLLQKRPDECGNRGVKFEPGQFMDLTIPGT--DVSRSYSPANLPN-PEGRLEFLIRVLPEGRFS 88 (250)
T ss_dssp EEEBCCCEEEETTEEEEEECSSTTSSSSSCCSCCSCCEEEECTTSC--SSSEEECCBCCSS-SSCCEEEEECCCTTSSSH
T ss_pred EEEEEEEEEcCCCeEEEEEEecCCCCcccccCcCCCcEEEEEeCCC--ccccccccCCCCC-CCCeEEEEEEECCCCCch
Confidence 456788888999999999987 6 4 57899999999999853 4889999999986 468899999996 9999
Q ss_pred HHHHHHHHhcccCCcccCcceeEEEeCCCCCCCCCcCCCCeEEEEEeCCChhhHHHHHHHHHHhhccCCCCCCceEEEEE
Q 008159 245 SSLYQMIHAELDSDADQMRCIPVAIEGPYGPATMDFLRYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIY 324 (575)
Q Consensus 245 ~~L~~~~~~~~~~~~~~~~g~~v~v~GPyG~~~~~~~~~~~vvlIagGiGITP~lsil~~l~~~~~~~~~~~~~~v~li~ 324 (575)
++|++.++ +|+.+.|+||+|.+..+...+++++|||||+||||+++|++++...+ ...+++|+|
T Consensus 89 ~~l~~~l~----------~Gd~v~v~gP~G~~~~~~~~~~~~vliagGtGiaP~~~~l~~l~~~~------~~~~v~l~~ 152 (250)
T 1tvc_A 89 DYLRNDAR----------VGQVLSVKGPLGVFGLKERGMAPRYFVAGGTGLAPVVSMVRQMQEWT------APNETRIYF 152 (250)
T ss_dssp HHHHHHSS----------SSSEEEEEEEECCCSCCCCSSSCEEEEEESSTTHHHHHHHHHHHHHT------CCSCEEEEE
T ss_pred HHHHhcCC----------CCCEEEEEcCccccccCccCCceEEEEEeccCHHHHHHHHHHHHhcC------CCceEEEEE
Confidence 99987666 69999999999999765445689999999999999999999998753 247899999
Q ss_pred EeCCcchhhhHHhHHHHhhhccCCCceeEEEEEEeCCCCCcchhhhhhchhhhhhhhccCCCceeEEecCCchHHHHHHH
Q 008159 325 VIKSSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSSVTVREVLNDLSLVRAVRFGTQSNYAVNGLESLIWMAALV 404 (575)
Q Consensus 325 ~~r~~~~l~~~~~l~~~l~~~~~~~~~l~~~~~vT~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vcGp~~~~~~~~v~ 404 (575)
++|+.+++.+.+++.++..+ ..+++++.++|++++.+.+.+|++++..........+...+|+|||.+ ||+++.
T Consensus 153 ~~r~~~~~~~~~el~~l~~~----~~~~~~~~~~s~~~~~~~g~~g~v~~~l~~~~~~~~~~~~vyvCGp~~--m~~~v~ 226 (250)
T 1tvc_A 153 GVNTEPELFYIDELKSLERS----MRNLTVKACVWHPSGDWEGEQGSPIDALREDLESSDANPDIYLCGPPG--MIDAAC 226 (250)
T ss_dssp ECSSSTTCCCHHHHHHHHHH----SSSCEEEECCSSCSSCCSSSSSSSSHHHHHHHHHSSSSSEEEEESSHH--HHHHHH
T ss_pred EeCCHHHhhhHHHHHHHHHh----CCCeEEEEEeccCCCCcCCccceehHHHHhhhhcccCCcEEEEeCCHH--HHHHHH
Confidence 99999999999998876422 246888888888755455567777765442211113456799999999 999999
Q ss_pred HHHHH
Q 008159 405 GITSI 409 (575)
Q Consensus 405 ~~~~~ 409 (575)
+.+..
T Consensus 227 ~~l~~ 231 (250)
T 1tvc_A 227 ELVRS 231 (250)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88776
No 5
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=99.97 E-value=5.7e-32 Score=269.46 Aligned_cols=200 Identities=18% Similarity=0.237 Sum_probs=157.3
Q ss_pred ceeEEEEEEecCCeEEEEEecCC-CCcccCCeEEEEEeCCCCCCccccCccccCCCCCCCcEEEEEEe--CCCccHHHHH
Q 008159 173 ETCILSARVFPSKAIELILPKHA-GLKFTPTSVIFMKIPSISKFQWHSFSITSSSSVDDQTMSLIVKC--DGEWTSSLYQ 249 (575)
Q Consensus 173 ~~~v~~~~~~~~~~~~l~~~~~~-~~~~~pGQ~v~l~~p~~~~~~~hpfSI~s~p~~~~~~l~l~Ik~--~G~~T~~L~~ 249 (575)
..+|++++.+++++.++++..+. .+.|+||||+.|.+|..++.++|||||+|.|. +++.++|+||. .|.+|++|+
T Consensus 7 ~~~V~~~~~~t~~~~~l~l~~~~~~~~~~pGQ~v~l~~~~~~~~~~R~ySi~s~~~-~~~~l~~~vk~~~~G~~S~~l~- 84 (262)
T 1ep3_B 7 MMTVVSQREVAYNIFEMVLKGTLVDEMDLPGQFLHLAVPNGAMLLRRPISISSWDK-RAKTCTILYRIGDETTGTYKLS- 84 (262)
T ss_dssp EEEEEEEEEEETTEEEEEEESGGGGGCCSTTCEEEECCSCTTCCSCEEEECCEEET-TTTEEEEEEECCCTTSHHHHHH-
T ss_pred ceEEEEEEEecCCEEEEEEEcCcccccCCCCceEEEEcCCCCceeeEEEEeeeecC-CCCEEEEEEEEecCCchHHHHh-
Confidence 46788999999999999998765 46899999999999976667999999999986 56789999999 899999997
Q ss_pred HHHhcccCCcccCcceeEEEeCCCCC-CCCCcC-CCCeEEEEEeCCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeC
Q 008159 250 MIHAELDSDADQMRCIPVAIEGPYGP-ATMDFL-RYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIK 327 (575)
Q Consensus 250 ~~~~~~~~~~~~~~g~~v~v~GPyG~-~~~~~~-~~~~vvlIagGiGITP~lsil~~l~~~~~~~~~~~~~~v~li~~~r 327 (575)
.++ +|+.+.|.||+|. |..+.. ..++++||||||||||++||++++..++ .+++|+|++|
T Consensus 85 ~l~----------~Gd~v~v~gP~G~~f~l~~~~~~~~~lliagGtGitP~~s~l~~l~~~~--------~~v~l~~~~r 146 (262)
T 1ep3_B 85 KLE----------SGAKVDVMGPLGNGFPVAEVTSTDKILIIGGGIGVPPLYELAKQLEKTG--------CQMTILLGFA 146 (262)
T ss_dssp TCC----------TTCEEEEEEEESBCCCCTTCCTTSEEEEEEEGGGSHHHHHHHHHHHHHT--------CEEEEEEEES
T ss_pred cCC----------CCCEEEEEcccCCCccCCCccCCCeEEEEECcCcHHHHHHHHHHHHHcC--------CeEEEEEEcC
Confidence 444 6999999999998 765433 3789999999999999999999998752 7899999999
Q ss_pred CcchhhhHHhHHHHhhhccCCCceeEEEEEEeCCCCCcchhhhhhchhhhhhhhccCCCceeEEecCCchHHHHHHHHHH
Q 008159 328 SSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSSVTVREVLNDLSLVRAVRFGTQSNYAVNGLESLIWMAALVGIT 407 (575)
Q Consensus 328 ~~~~l~~~~~l~~~l~~~~~~~~~l~~~~~vT~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vcGp~~~~~~~~v~~~~ 407 (575)
+.+++.+.+++.++. . . ++++ .++ ++ +.+.+|++++... +. ..+...+|+|||.+ ||+++.+ +
T Consensus 147 ~~~~~~~~~el~~l~-----~--~-~~~~-~~~-~~-~~~~~g~v~~~l~-~~--~~~~~~vyvCGp~~--m~~~v~~-l 209 (262)
T 1ep3_B 147 SENVKILENEFSNLK-----N--V-TLKI-ATD-DG-SYGTKGHVGMLMN-EI--DFEVDALYTCGAPA--MLKAVAK-K 209 (262)
T ss_dssp SGGGCCCHHHHHTST-----T--E-EEEE-EET-TC-SSSEESCHHHHHH-HC--CSCCSEEEEESCHH--HHHHHHH-H
T ss_pred CHHHhhhHHHHhhhc-----c--C-cEEE-EEC-CC-CCcceeehHHHHH-hh--ccCCCEEEEECCHH--HHHHHHH-H
Confidence 999999999887631 1 1 3332 233 22 3344566665322 21 22346899999998 9999987 6
Q ss_pred HH
Q 008159 408 SI 409 (575)
Q Consensus 408 ~~ 409 (575)
.+
T Consensus 210 ~~ 211 (262)
T 1ep3_B 210 YD 211 (262)
T ss_dssp TT
T ss_pred Hh
Confidence 54
No 6
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum}
Probab=99.97 E-value=3.7e-30 Score=253.39 Aligned_cols=217 Identities=13% Similarity=0.159 Sum_probs=172.7
Q ss_pred ceeEEEEEEecCCeEEEEEecCC---CCcccCCeEEEEEeCCCCCCccccCccccCCCCCCCcEEEEEEeC--CCccHHH
Q 008159 173 ETCILSARVFPSKAIELILPKHA---GLKFTPTSVIFMKIPSISKFQWHSFSITSSSSVDDQTMSLIVKCD--GEWTSSL 247 (575)
Q Consensus 173 ~~~v~~~~~~~~~~~~l~~~~~~---~~~~~pGQ~v~l~~p~~~~~~~hpfSI~s~p~~~~~~l~l~Ik~~--G~~T~~L 247 (575)
..+|++++.+++++.++++..+. .+.|+||||+.|++|..+...+||||++|.|. +++.++|+||.. |.+|++|
T Consensus 13 ~~~v~~~~~~t~~~~~~~l~~~~~~~~~~~~pGq~v~l~~~~~g~~~~R~ysi~s~~~-~~~~~~l~vk~~~~G~~S~~l 91 (243)
T 2eix_A 13 KFMLREKQIINHNTRLFRFNLHHPEDVVGLPIGQHMSVKATVDGKEIYRPYTPVSSDD-EKGYFDLIIKVYEKGQMSQYI 91 (243)
T ss_dssp EEEEEEEEEEETTEEEEEEECSSTTCCCCCCTTCEEEEEEEETTEEEEEEECCCSCTT-CCSEEEEEEECCTTCHHHHHH
T ss_pred EEEEEEEEEeCCCeEEEEEEcCCCCcccCcCCceEEEEEEeeCCCEEEeeeeecCCCC-CCCEEEEEEEEcCCCCcchHh
Confidence 56789999999999888887653 47899999999999866666899999999986 568999999995 8899999
Q ss_pred HHHHHhcccCCcccCcceeEEEeCCCCCCCCCcCCCCeEEEEEeCCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeC
Q 008159 248 YQMIHAELDSDADQMRCIPVAIEGPYGPATMDFLRYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIK 327 (575)
Q Consensus 248 ~~~~~~~~~~~~~~~~g~~v~v~GPyG~~~~~~~~~~~vvlIagGiGITP~lsil~~l~~~~~~~~~~~~~~v~li~~~r 327 (575)
.+ ++ +|+.+.|.||+|.|..+...+++++|||||+||||+++|++++.... ....+++|+|++|
T Consensus 92 ~~-l~----------~Gd~v~v~gP~G~f~~~~~~~~~~vliagG~GiaP~~~~l~~l~~~~-----~~~~~v~l~~~~r 155 (243)
T 2eix_A 92 DH-LN----------PGDFLQVRGPKGQFDYKPNMVKEMGMIAGGTGITPMLQVARAIIKNP-----KEKTIINLIFANV 155 (243)
T ss_dssp HT-CC----------TTCEEEEEEEECSCCCCTTSSSEEEEEEEGGGHHHHHHHHHHHHTCT-----TCCCEEEEEEEEE
T ss_pred hc-CC----------CCCEEEEECCeEEEEeCCCCCcEEEEEecCccHHHHHHHHHHHHhCC-----CCCcEEEEEEEcC
Confidence 63 44 69999999999998765555789999999999999999999998641 1247899999999
Q ss_pred CcchhhhHHhHHHHhhhccCCCceeEEEEEEeCCCCCcchhhhhhchhhhhhhhccC-CCceeEEecCCchHHHHHHHHH
Q 008159 328 SSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSSVTVREVLNDLSLVRAVRFG-TQSNYAVNGLESLIWMAALVGI 406 (575)
Q Consensus 328 ~~~~l~~~~~l~~~l~~~~~~~~~l~~~~~vT~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~vcGp~~~~~~~~v~~~ 406 (575)
+.+++.+.+++.++..+ ..++++++.++++++.+.+.+|++++....+..... +...+|+|||.+ ||+++.+.
T Consensus 156 ~~~~~~~~~el~~l~~~----~~~~~~~~~~s~~~~~~~g~~g~v~~~~l~~~~~~~~~~~~vy~CGp~~--m~~~v~~~ 229 (243)
T 2eix_A 156 NEDDILLRTELDDMAKK----YSNFKVYYVLNNPPAGWTGGVGFVSADMIKQHFSPPSSDIKVMMCGPPM--MNKAMQGH 229 (243)
T ss_dssp EGGGCTTHHHHHHHHHH----CTTEEEEEEEEECCTTCCSEESSCCHHHHHHHSCCTTSSEEEEEESSHH--HHHHHHHH
T ss_pred CHHHhhHHHHHHHHHHH----CCCeEEEEEeCCCCccccCcCCccCHHHHHHhcCCCCCCeEEEEECCHH--HHHHHHHH
Confidence 99999999998776322 246888888888765555667888754433333222 345799999999 99999988
Q ss_pred HHHHHHHH
Q 008159 407 TSILFVIF 414 (575)
Q Consensus 407 ~~~~~~~~ 414 (575)
+.. .|+
T Consensus 230 l~~--~G~ 235 (243)
T 2eix_A 230 LET--LGY 235 (243)
T ss_dssp HHH--HTC
T ss_pred HHH--cCC
Confidence 876 444
No 7
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=99.97 E-value=1.8e-29 Score=257.84 Aligned_cols=220 Identities=15% Similarity=0.194 Sum_probs=168.5
Q ss_pred ceeEEEEEEec-----CCeEEEEEecCCCCcccCCeEEEEEeCCCC------CCccccCccccCCCC---CCCcEEEEEE
Q 008159 173 ETCILSARVFP-----SKAIELILPKHAGLKFTPTSVIFMKIPSIS------KFQWHSFSITSSSSV---DDQTMSLIVK 238 (575)
Q Consensus 173 ~~~v~~~~~~~-----~~~~~l~~~~~~~~~~~pGQ~v~l~~p~~~------~~~~hpfSI~s~p~~---~~~~l~l~Ik 238 (575)
..+|++++.++ ++++++++..+..+.|+||||++|++|..+ +.++|||||+|+|.. +++.++|+||
T Consensus 30 ~~~V~~~~~~t~~~~~~~v~~~~l~~~~~~~~~pGQ~v~l~~~~~~~~~~g~~~~~R~ySias~p~~~~~~~~~~~l~Vk 109 (311)
T 3lo8_A 30 TATIVSVESLVGPKAPGETCHIVIDHGGNVPYWEGQSYGVIPPGENPKKPGAPQNVRLYSIASTRYGDNFDGRTGSLCVR 109 (311)
T ss_dssp EEEEEEEEECSCTTSSSCEEEEEEECTTSSCCCTTCEEEEECSSBCTTSTTCBCCCEEEEBCSCTTTTTTSSSEEEEEEE
T ss_pred EEEEEeeEeccCCCCCCccEEEEEeCCCCCcccCCCEEEEeCCCCccccCCCCCCceeeEecCCCcccCCCCCEEEEEEE
Confidence 46789999998 899999999887899999999999998752 358999999999863 2478999999
Q ss_pred eC---------------CCccHHHHHHHHhcccCCcccCcceeEEEeCCCCCCCCCc--CCCCeEEEEEeCCChhhHHHH
Q 008159 239 CD---------------GEWTSSLYQMIHAELDSDADQMRCIPVAIEGPYGPATMDF--LRYDSLLLVAGGIGITPFLSI 301 (575)
Q Consensus 239 ~~---------------G~~T~~L~~~~~~~~~~~~~~~~g~~v~v~GPyG~~~~~~--~~~~~vvlIagGiGITP~lsi 301 (575)
.. |.+|++|++ ++ +|+.+.|+||||.+.... ..++++||||||+||||++||
T Consensus 110 ~~~~~~~~~~~~~~~~~G~~S~~L~~-l~----------~Gd~v~v~gP~G~~~~~~~~~~~~~~vlIagGtGIaP~~s~ 178 (311)
T 3lo8_A 110 RAVYYDPETGKEDPSKNGVCSNFLCN-SK----------PGDKIQLTGPSGKIMLLPEEDPNATHIMIATGTGVAPFRGY 178 (311)
T ss_dssp CCCCCCTTTCCCCGGGSCHHHHHHHT-CC----------TTCEEEEEEEECCTTCCCCSCTTCEEEEEEEGGGGHHHHHH
T ss_pred EEEecccccCcCCcCCCCchhhHHhc-CC----------CcCEEEEEeccCCcccCCCcCCCCCEEEEECCEEHHHHHHH
Confidence 64 889999987 44 699999999999986543 367899999999999999999
Q ss_pred HHHHHHhhccCCCCCCceEEEEEEeCCcchhhhHHhHHHHhhhccCCCceeEEEEEEeCCCCCcchhhhhhchhhhhhh-
Q 008159 302 LQEIASAQSNRKYRFPSKVQLIYVIKSSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSSVTVREVLNDLSLVRA- 380 (575)
Q Consensus 302 l~~l~~~~~~~~~~~~~~v~li~~~r~~~~l~~~~~l~~~l~~~~~~~~~l~~~~~vT~~~~~~~~~~g~~~~~~~~~~- 380 (575)
+++++.++. ......++++|+|++|+.+++.|.+++.++..+. ..++++++++|+++..+.+.++.+++......
T Consensus 179 l~~~~~~~~-~~~~~~~~v~l~~g~r~~~d~~~~~el~~l~~~~---~~~~~~~~~~s~~~~~~~g~~~~v~~~l~~~~~ 254 (311)
T 3lo8_A 179 LRRMFMEDV-PNYRFGGLAWLFLGVANSDSLLYDEEFTSYLKQY---PDNFRYDKALSREQKNRSGGKMYVQDKIEEYSD 254 (311)
T ss_dssp HHHHHTEEC-TTCCCCSEEEEEEEESSGGGCSSHHHHHHHHHHC---TTTEEEEEEETTTC-------CCHHHHHHHTHH
T ss_pred HHHHHHhcc-ccccCCCCEEEEEecCChHHhhHHHHHHHHHHhC---CCcEEEEEEECCCCcccCCCcceehHHHHHHHH
Confidence 999986531 1111236899999999999999999998864321 23789999999987554444555544332211
Q ss_pred -h-c-cCCCceeEEecCCchHHHHHHHHHHHH
Q 008159 381 -V-R-FGTQSNYAVNGLESLIWMAALVGITSI 409 (575)
Q Consensus 381 -~-~-~~~~~~~~vcGp~~~~~~~~v~~~~~~ 409 (575)
+ . ..+...+|+|||.+ ||+++...+..
T Consensus 255 ~~~~~~~~~~~vyvCGp~~--m~~~v~~~L~~ 284 (311)
T 3lo8_A 255 EIFKLLDGGAHIYFCGLKG--MMPGIQDTLKK 284 (311)
T ss_dssp HHHHHHHTTCEEEEEECGG--GHHHHHHHHHH
T ss_pred HHHHhhcCCcEEEEECCHH--HHHHHHHHHHH
Confidence 0 1 12457899999998 99999988777
No 8
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A*
Probab=99.97 E-value=2.4e-29 Score=256.56 Aligned_cols=220 Identities=17% Similarity=0.216 Sum_probs=169.6
Q ss_pred ceeEEEEEEecCC-----eEEEEEecCCCCcccCCeEEEEEeCCCC----CCccccCccccCCCC---CCCcEEEEEEeC
Q 008159 173 ETCILSARVFPSK-----AIELILPKHAGLKFTPTSVIFMKIPSIS----KFQWHSFSITSSSSV---DDQTMSLIVKCD 240 (575)
Q Consensus 173 ~~~v~~~~~~~~~-----~~~l~~~~~~~~~~~pGQ~v~l~~p~~~----~~~~hpfSI~s~p~~---~~~~l~l~Ik~~ 240 (575)
..+|++++.++++ +.++++..+..+.|+||||++|++|..+ +.++|||||+|+|.. +++.++|+||+.
T Consensus 35 ~~~V~~~~~l~~~~~~~~v~~l~l~~~~~~~~~pGQ~v~l~~~~~~~~g~~~~~R~ySias~p~~~~~~~~~~~l~Vk~~ 114 (310)
T 3vo2_A 35 VGRCLSNTRITGDDAPGETWHMVFSTEGEIPYREGQSIGIIADGEDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRL 114 (310)
T ss_dssp EEEEEEEEECSCSSSSSCEEEEEEECTTCCCCCTTCEEEEECSSBCTTSCBCCCEEEECCSCTTTTTTSSSEEEEEEECC
T ss_pred EEEEEEEEEccCCCCCccEEEEEEeCCCCCcccCCCEEEEECCCcCCCCCcCcceeeecCCCCcccCCCCCEEEEEEEEE
Confidence 4678889988876 9999999877889999999999998642 346899999999852 357899999974
Q ss_pred -----------CCccHHHHHHHHhcccCCcccCcceeEEEeCCCCCCCCC-cCCCCeEEEEEeCCChhhHHHHHHHHHHh
Q 008159 241 -----------GEWTSSLYQMIHAELDSDADQMRCIPVAIEGPYGPATMD-FLRYDSLLLVAGGIGITPFLSILQEIASA 308 (575)
Q Consensus 241 -----------G~~T~~L~~~~~~~~~~~~~~~~g~~v~v~GPyG~~~~~-~~~~~~vvlIagGiGITP~lsil~~l~~~ 308 (575)
|.+|++|++ ++ +|+.|.|+||+|.+... ...+++++|||||+||||++||+++++..
T Consensus 115 ~~~~~~~~~~~G~~S~~L~~-l~----------~Gd~v~v~gP~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~ 183 (310)
T 3vo2_A 115 VYTNDQGEIVKGVCSNFLCD-LK----------PGADVKITGPVGKEMLMPKDPNATVIMLATGTGIAPFRSFLWKMFLE 183 (310)
T ss_dssp EEECTTSCEEECHHHHHHHT-CC----------TTCEEEEEEEECSTTCCBSCTTCEEEEEEEGGGGHHHHHHHHHHHSS
T ss_pred EeccCCCCcCCcchhhHHhc-CC----------CCCEEEEEeccCCcccCCCCCCCCEEEEeCCcchhHHHHHHHHHHHh
Confidence 889999987 44 69999999999987643 33578999999999999999999999864
Q ss_pred hccCCCCCCceEEEEEEeCCcchhhhHHhHHHHhhhccCCCceeEEEEEEeCCCCCcchhhhhhchhhhhh--hh-c-c-
Q 008159 309 QSNRKYRFPSKVQLIYVIKSSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSSVTVREVLNDLSLVR--AV-R-F- 383 (575)
Q Consensus 309 ~~~~~~~~~~~v~li~~~r~~~~l~~~~~l~~~l~~~~~~~~~l~~~~~vT~~~~~~~~~~g~~~~~~~~~--~~-~-~- 383 (575)
+. ......++++|+|++|+.+++.|.+++.++..+. ..++++++++|+++..+.+.++++++..... .+ . .
T Consensus 184 ~~-~~~~~~~~v~L~~g~r~~~d~~~~~el~~l~~~~---~~~~~v~~~~sr~~~~~~g~~~~v~~~l~~~~~~l~~~l~ 259 (310)
T 3vo2_A 184 EH-EDYKFSGLAWLFLGVPTSDSLLYKEELEKMKEMA---PDNFRLDFAVSREQTNAAGEKMYIQTRMAEYREELWELLK 259 (310)
T ss_dssp CC-TTCCCCSEEEEEEEESSGGGCCSHHHHHHHHHHC---TTTEEEEEEETTTCBCTTCCBCCHHHHHHTTHHHHHHHHT
T ss_pred hc-ccccCCCcEEEEEEecChhhcccHHHHHHHHHhC---CCCEEEEEEECCCCCCCCCcceehHHHHHHHHHHHHHhcc
Confidence 21 1111237899999999999999999998864321 2378999999998754444444443332211 11 1 1
Q ss_pred CCCceeEEecCCchHHHHHHHHHHHH
Q 008159 384 GTQSNYAVNGLESLIWMAALVGITSI 409 (575)
Q Consensus 384 ~~~~~~~vcGp~~~~~~~~v~~~~~~ 409 (575)
.+...+|+|||.+ ||+++.+.+..
T Consensus 260 ~~~~~vyvCGp~~--M~~~v~~~L~~ 283 (310)
T 3vo2_A 260 KDNTYVYMCGLKG--MEKGIDDIMLN 283 (310)
T ss_dssp STTEEEEEEESTT--HHHHHHHHHHH
T ss_pred cCCcEEEEeCCHH--HHHHHHHHHHH
Confidence 2457899999999 99999988877
No 9
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A*
Probab=99.96 E-value=4.7e-29 Score=246.29 Aligned_cols=211 Identities=14% Similarity=0.163 Sum_probs=165.5
Q ss_pred ceeEEEEEEecCCeEEEEEecCCCCcccCCeEEEEEeCCCCCCccccCccccCCCCCCCcEEEEEEeC--CCccHHHHHH
Q 008159 173 ETCILSARVFPSKAIELILPKHAGLKFTPTSVIFMKIPSISKFQWHSFSITSSSSVDDQTMSLIVKCD--GEWTSSLYQM 250 (575)
Q Consensus 173 ~~~v~~~~~~~~~~~~l~~~~~~~~~~~pGQ~v~l~~p~~~~~~~hpfSI~s~p~~~~~~l~l~Ik~~--G~~T~~L~~~ 250 (575)
..+|++++.+++++.++++. ++.+.|+||||+.|++|..+..++|||||+|.|. ++.++++||.. |.+|++|++
T Consensus 6 ~~~V~~~~~~~~~~~~l~l~-~~~~~~~pGq~v~l~~~~~g~~~~R~ySi~s~~~--~~~l~~~v~~~~~G~~s~~l~~- 81 (248)
T 1fdr_A 6 TGKVTKVQNWTDALFSLTVH-APVLPFTAGQFTKLGLEIDGERVQRAYSYVNSPD--NPDLEFYLVTVPDGKLSPRLAA- 81 (248)
T ss_dssp EEEEEEEEECSSSEEEEEEE-CCCCCCCTTCEEEEEECC---CEEEEEECCSCTT--CSSEEEEEECCTTCSSHHHHHT-
T ss_pred EEEEEEEEEcCCCEEEEEEe-CCCCCcCCCCcEEEEccCCCCeeeeeecccCCCC--CCcEEEEEEEeCCCchhhHHHh-
Confidence 46788999999999999996 5568899999999999976777899999999985 37899999986 999999974
Q ss_pred HHhcccCCcccCcceeEEEe-CCCCCCCCCcC-CCCeEEEEEeCCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeCC
Q 008159 251 IHAELDSDADQMRCIPVAIE-GPYGPATMDFL-RYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIKS 328 (575)
Q Consensus 251 ~~~~~~~~~~~~~g~~v~v~-GPyG~~~~~~~-~~~~vvlIagGiGITP~lsil~~l~~~~~~~~~~~~~~v~li~~~r~ 328 (575)
++ +|+.+.|. ||+|.|.++.. +.++++|||||+||||+++|++++...+ ...+++|+|++|+
T Consensus 82 l~----------~Gd~v~v~~gP~G~f~l~~~~~~~~~vliagG~GitP~~~~l~~l~~~~------~~~~v~l~~~~r~ 145 (248)
T 1fdr_A 82 LK----------PGDEVQVVSEAAGFFVLDEVPHCETLWMLATGTAIGPYLSILRLGKDLD------RFKNLVLVHAARY 145 (248)
T ss_dssp CC----------TTCEEEEESSCBCCCSGGGSCCCSEEEEEEEGGGGHHHHHHHHHCCSCT------TCSEEEEEEEESS
T ss_pred CC----------CcCEEEEecCCcceeEcCCCCCCceEEEEEecccHHHHHHHHHHHHhhC------CCCcEEEEEEcCC
Confidence 44 69999999 99999865543 3789999999999999999999876432 2478999999999
Q ss_pred cchhhhHHhHHHHhhhccCCCceeEEEEEEeCCCCCcchhhhhhchhhhhhh----h--cc-CCCceeEEecCCchHHHH
Q 008159 329 SQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSSVTVREVLNDLSLVRA----V--RF-GTQSNYAVNGLESLIWMA 401 (575)
Q Consensus 329 ~~~l~~~~~l~~~l~~~~~~~~~l~~~~~vT~~~~~~~~~~g~~~~~~~~~~----~--~~-~~~~~~~vcGp~~~~~~~ 401 (575)
.+++.+.+++.++..+. ..+++++..+|+++.. .+.+|++++....+. + .. .+...+|+|||.+ ||+
T Consensus 146 ~~~~~~~~el~~l~~~~---~~~~~~~~~~s~~~~~-~~~~g~v~~~l~~~~l~~~~~~~~~~~~~~vy~CGp~~--m~~ 219 (248)
T 1fdr_A 146 AADLSYLPLMQELEKRY---EGKLRIQTVVSRETAA-GSLTGRIPALIESGELESTIGLPMNKETSHVMLCGNPQ--MVR 219 (248)
T ss_dssp GGGCTTHHHHHHHHHHT---TTSEEEEEEESSSCCT-TEEESCHHHHHHTSHHHHHHTSCCCTTTEEEEEEECHH--HHH
T ss_pred HHHhhHHHHHHHHHHhC---cCcEEEEEEEecCCCC-CCcceeeChHHHhhhHHHhhccCCCccCCEEEEeCCHH--HHH
Confidence 99999999988763221 2478888889887642 234566665543221 1 01 2346799999999 999
Q ss_pred HHHHHH-HH
Q 008159 402 ALVGIT-SI 409 (575)
Q Consensus 402 ~v~~~~-~~ 409 (575)
++.+.+ .+
T Consensus 220 ~v~~~l~~~ 228 (248)
T 1fdr_A 220 DTQQLLKET 228 (248)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999887 65
No 10
>3jqq_A Ferredoxin NADP reductase; FAD, oxidoreductase; HET: FAD A2P; 2.20A {Plasmodium falciparum} PDB: 2ok8_A* 2ok7_A* 3jqr_A* 3jqp_A*
Probab=99.96 E-value=4.1e-29 Score=255.25 Aligned_cols=217 Identities=15% Similarity=0.188 Sum_probs=167.6
Q ss_pred eeEEEEEEec-----CCeEEEEEecCCCCcccCCeEEEEEeCCCC----------------------------------C
Q 008159 174 TCILSARVFP-----SKAIELILPKHAGLKFTPTSVIFMKIPSIS----------------------------------K 214 (575)
Q Consensus 174 ~~v~~~~~~~-----~~~~~l~~~~~~~~~~~pGQ~v~l~~p~~~----------------------------------~ 214 (575)
.+|++++.+. +++..|++..+..++|.||||+.|.+|..+ .
T Consensus 18 ~~v~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~GQ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~g~ 97 (316)
T 3jqq_A 18 CKIVDKINLVRPNSPNEVYHLEINHNGLFKYLEGHTCGIIPYYNELDNNPNNQINKDHNIINTTNHTNHNNIALSHIKKQ 97 (316)
T ss_dssp EEEEEEEECSCTTCSCCEEEEEEECTTCCCCCTTCEEEECTTCC-----------------------------------C
T ss_pred EEEEeeEEccCCCCCCceEEEEEeCCCCcceecCcEeEEECCCcccccccccccccccccccccccccccccccccCCCc
Confidence 4688888885 789999999888899999999999998653 4
Q ss_pred CccccCccccCCCCCCCcEEEEEEeC--------------CCccHHHHHHHHhcccCCcccCcceeEEEeCCCCCCCCCc
Q 008159 215 FQWHSFSITSSSSVDDQTMSLIVKCD--------------GEWTSSLYQMIHAELDSDADQMRCIPVAIEGPYGPATMDF 280 (575)
Q Consensus 215 ~~~hpfSI~s~p~~~~~~l~l~Ik~~--------------G~~T~~L~~~~~~~~~~~~~~~~g~~v~v~GPyG~~~~~~ 280 (575)
.++|||||+|+|. ++.++|+||+. |.+|++|. .++ +|+.|.|+||+|.|.++.
T Consensus 98 ~~~R~ySIaS~p~--~~~l~l~Vk~~~y~~~~~~~~~~~~G~~S~~L~-~l~----------~Gd~v~v~gP~G~f~l~~ 164 (316)
T 3jqq_A 98 RCARLYSISSSNN--MENLSVAIKIHKYEQTENAPNITNYGYCSGFIK-NLK----------INDDIYLTGAHGYFNLPN 164 (316)
T ss_dssp CCCEEEEBCSCTT--SSSEEEEEECCBC---------CCBCHHHHHHH-TCC----------TTCEEEEEEEECCCCCCT
T ss_pred ccceeeecccCCC--CCeEEEEEEEEEecccccccCcCCCCchhHHHh-hCC----------CCCEEEEEecCCceEcCC
Confidence 6899999999985 37899999974 88999994 344 699999999999987654
Q ss_pred C---CCCeEEEEEeCCChhhHHHHHHHHHHhhcc----CCCCCCceEEEEEEeCCcchhhhHHhHHHHhhhccCCCceeE
Q 008159 281 L---RYDSLLLVAGGIGITPFLSILQEIASAQSN----RKYRFPSKVQLIYVIKSSQEICLLNSISPLLSNQQSKKWHLT 353 (575)
Q Consensus 281 ~---~~~~vvlIagGiGITP~lsil~~l~~~~~~----~~~~~~~~v~li~~~r~~~~l~~~~~l~~~l~~~~~~~~~l~ 353 (575)
. ..+++|||||||||||++||++++...+.. ......++++|+|++|+.+++.|.+++.++..+. ..+++
T Consensus 165 ~~~~~~~~vvlIAgGtGIaP~~sil~~l~~~~~~~~~~~~~~~~~~v~L~~g~R~~~d~~~~~eL~~l~~~~---~~~~~ 241 (316)
T 3jqq_A 165 DAIQKNTNFIFIATGTGISPYISFLKKLFAYDKNNLYNRNSNYTGYITIYYGVYNEDSILYLNELEYFQKMY---PNNIN 241 (316)
T ss_dssp THHHHTCCEEEEEEGGGGHHHHHHHHHHTTCCGGGTTCCCCCCCCCEEEEEEESSGGGCTTHHHHHHHHHHC---TTTEE
T ss_pred cccCCCCcEEEEeCCceechHHHHHHHHHHhccccccccccCCCCcEEEEEEecCHHHhhcHHHHHHHHHhC---CCcEE
Confidence 3 278999999999999999999999875311 0111247899999999999999999998764321 23789
Q ss_pred EEEEEeCCCCCcchhhhhhchhhhhhhhc----c-CCCceeEEecCCchHHHHHHHHHHHH
Q 008159 354 LKVFVTQEEQSSVTVREVLNDLSLVRAVR----F-GTQSNYAVNGLESLIWMAALVGITSI 409 (575)
Q Consensus 354 ~~~~vT~~~~~~~~~~g~~~~~~~~~~~~----~-~~~~~~~vcGp~~~~~~~~v~~~~~~ 409 (575)
+++++|++++ +.+.+|++++........ . .+...+|+|||.+ ||+++.+.+..
T Consensus 242 ~~~~~s~~~~-~~g~~g~V~~~l~~~~~~~~~~l~~~~~~vyvCGP~~--m~~~v~~~l~~ 299 (316)
T 3jqq_A 242 IHYVFSYKQN-SDATSFYVQDEIYKRKTEFLNLFNNYKCELYICGKKS--IRYKVMDILKS 299 (316)
T ss_dssp EEEEEGGGCC----CBCCHHHHHHHTHHHHHHHHHHTCCEEEEEECST--HHHHHHHHHHC
T ss_pred EEEEECCCcc-cCCCccchhHHHHHhHHHHHHhhccCCeEEEEeCCHH--HHHHHHHHHHH
Confidence 9999999854 344455555443322111 1 2457899999999 99999988876
No 11
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A*
Probab=99.96 E-value=2.1e-29 Score=252.67 Aligned_cols=218 Identities=14% Similarity=0.172 Sum_probs=171.0
Q ss_pred ceeEEEEEEecCCeEEEEEecCC---CCcccCCeEEEEEeCCCCCCccccCccccCCCCCCCcEEEEEEeC---------
Q 008159 173 ETCILSARVFPSKAIELILPKHA---GLKFTPTSVIFMKIPSISKFQWHSFSITSSSSVDDQTMSLIVKCD--------- 240 (575)
Q Consensus 173 ~~~v~~~~~~~~~~~~l~~~~~~---~~~~~pGQ~v~l~~p~~~~~~~hpfSI~s~p~~~~~~l~l~Ik~~--------- 240 (575)
..+|++++.+++++.++++..+. .+.|+||||+.|++|..+..++|||||+|+|. +++.++|+||..
T Consensus 18 ~~~V~~~~~~~~~~~~~~l~~~~~~~~~~~~pGQ~v~l~~~~~g~~~~R~ySi~s~~~-~~~~~~l~vk~~~~~~~~~~~ 96 (275)
T 1umk_A 18 PLRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPISSDD-DKGFVDLVIKVYFKDTHPKFP 96 (275)
T ss_dssp EEEEEEEEECSSSEEEEEEECSSTTCBCCCCTTCEEEEEEEETTEEEEEEECCSSCTT-CCSEEEEEEECCCSSSBTTBT
T ss_pred EEEEEEEEEcCCCeEEEEEEcCCcccccCCCCCcEEEEEEeeCCcEEEeccccCCccC-CCCeEEEEEEEeccCcccccC
Confidence 46789999999999888887653 36899999999999876777899999999986 568999999986
Q ss_pred --CCccHHHHHHHHhcccCCcccCcceeEEEeCCCCCCCC--------Cc--------CCCCeEEEEEeCCChhhHHHHH
Q 008159 241 --GEWTSSLYQMIHAELDSDADQMRCIPVAIEGPYGPATM--------DF--------LRYDSLLLVAGGIGITPFLSIL 302 (575)
Q Consensus 241 --G~~T~~L~~~~~~~~~~~~~~~~g~~v~v~GPyG~~~~--------~~--------~~~~~vvlIagGiGITP~lsil 302 (575)
|.+|++|. .++ +|+.+.|+||+|.+.. +. ...+++||||||+||||+++|+
T Consensus 97 ~~G~~S~~L~-~l~----------~Gd~v~v~gP~G~~~~~~~~~f~l~~~~~~~~~~~~~~~~vliagGtGIaP~~~~l 165 (275)
T 1umk_A 97 AGGKMSQYLE-SMQ----------IGDTIEFRGPSGLLVYQGKGKFAIRPDKKSNPIIRTVKSVGMIAGGTGITPMLQVI 165 (275)
T ss_dssp TCCHHHHHHH-HCC----------TTCEEEEEEEECSEEEEETTEEEECSSTTSCCEEEECSEEEEEEEGGGHHHHHHHH
T ss_pred CCChhHHHHh-cCC----------CCCEEEEEcCccceEecCCccccccccccccccccCCceEEEEecCccHhHHHHHH
Confidence 89999996 444 6999999999998742 11 2468999999999999999999
Q ss_pred HHHHHhhccCCCCCCceEEEEEEeCCcchhhhHHhHHHHhhhccCCCceeEEEEEEeCCCCCcchhhhhhchhhhhhhhc
Q 008159 303 QEIASAQSNRKYRFPSKVQLIYVIKSSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSSVTVREVLNDLSLVRAVR 382 (575)
Q Consensus 303 ~~l~~~~~~~~~~~~~~v~li~~~r~~~~l~~~~~l~~~l~~~~~~~~~l~~~~~vT~~~~~~~~~~g~~~~~~~~~~~~ 382 (575)
+++.... ....+++|+|++|+.+++.+.+++.++..+. ..++++++.+++++..+.+.+|++++....+.+.
T Consensus 166 ~~l~~~~-----~~~~~v~l~~~~r~~~d~~~~~el~~l~~~~---~~~~~~~~~~s~~~~~~~~~~g~v~~~~l~~~l~ 237 (275)
T 1umk_A 166 RAIMKDP-----DDHTVCHLLFANQTEKDILLRPELEELRNKH---SARFKLWYTLDRAPEAWDYGQGFVNEEMIRDHLP 237 (275)
T ss_dssp HHHHTCT-----TCCCEEEEEEEESSGGGCTTHHHHHHHHHHC---TTTEEEEEEESSCCSSCSSEESSCCHHHHHHHSC
T ss_pred HHHHhCC-----CCCcEEEEEEEcCCHHHhhHHHHHHHHHHhC---cCcEEEEEEEcCCCccccCccCccCHHHHHHhcC
Confidence 9998641 1247899999999999999999998764321 1357887777876655556778888654433332
Q ss_pred c-CCCceeEEecCCchHHHH-HHHHHHHHHHHHH
Q 008159 383 F-GTQSNYAVNGLESLIWMA-ALVGITSILFVIF 414 (575)
Q Consensus 383 ~-~~~~~~~vcGp~~~~~~~-~v~~~~~~~~~~~ 414 (575)
. .+...+|+|||.+ ||+ ++...+.+ .|+
T Consensus 238 ~~~~~~~vyvCGp~~--m~~~~v~~~L~~--~G~ 267 (275)
T 1umk_A 238 PPEEEPLVLMCGPPP--MIQYACLPNLDH--VGH 267 (275)
T ss_dssp CGGGCCEEEEESCHH--HHHHTTHHHHHH--HTC
T ss_pred CCCCCeEEEEECCHH--HHHHHHHHHHHH--cCC
Confidence 2 1346799999999 999 88888766 454
No 12
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.96 E-value=4.7e-29 Score=257.68 Aligned_cols=208 Identities=16% Similarity=0.252 Sum_probs=169.5
Q ss_pred ceeEEEEEEecCCeEEEEEecCC---CCcccCCeEEEEEeCCCCCCccccCccccCCCCCCCcEEEEEEeC--CCccHHH
Q 008159 173 ETCILSARVFPSKAIELILPKHA---GLKFTPTSVIFMKIPSISKFQWHSFSITSSSSVDDQTMSLIVKCD--GEWTSSL 247 (575)
Q Consensus 173 ~~~v~~~~~~~~~~~~l~~~~~~---~~~~~pGQ~v~l~~p~~~~~~~hpfSI~s~p~~~~~~l~l~Ik~~--G~~T~~L 247 (575)
..+|++++.+++++.++++..+. .+.|+||||+.|++|.. .++|||||+|.|. ++.++|+||.. |.+|++|
T Consensus 110 ~~~V~~~~~~~~~~~~l~l~~~~~~~~~~~~pGQ~v~l~~~~~--~~~R~ySi~s~~~--~~~l~~~vk~~~~G~~S~~L 185 (338)
T 1krh_A 110 EGTLARVENLSDSTITFDIQLDDGQPDIHFLAGQYVNVTLPGT--TETRSYSFSSQPG--NRLTGFVVRNVPQGKMSEYL 185 (338)
T ss_dssp EEEEEEEEESSSSEEEEEEEECTTCCCCCCCTTCEEEEECTTS--SCEEEEECCSCTT--CSEEEEEEECCTTCHHHHHH
T ss_pred EEEEEEEEEcCCCEEEEEEEeCCCCCCCCcCCCCeEEEEcCCC--CccccccccCCCC--CCeEEEEEEEcCCCCchhhH
Confidence 46788999999999999998765 57899999999999864 3799999999985 67899999996 8899999
Q ss_pred HHHHHhcccCCcccCcceeEEEeCCCCCCCCCcCCCCeEEEEEeCCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeC
Q 008159 248 YQMIHAELDSDADQMRCIPVAIEGPYGPATMDFLRYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIK 327 (575)
Q Consensus 248 ~~~~~~~~~~~~~~~~g~~v~v~GPyG~~~~~~~~~~~vvlIagGiGITP~lsil~~l~~~~~~~~~~~~~~v~li~~~r 327 (575)
++.++ +|+.+.|+||||.|.++.. .++++|||||+||||+++|++++...+ ..++++|+|++|
T Consensus 186 ~~~l~----------~Gd~v~v~gP~G~f~~~~~-~~~~vliagGtGiaP~~s~l~~l~~~~------~~~~v~l~~~~r 248 (338)
T 1krh_A 186 SVQAK----------AGDKMSFTGPFGSFYLRDV-KRPVLMLAGGTGIAPFLSMLQVLEQKG------SEHPVRLVFGVT 248 (338)
T ss_dssp HTTCC----------TTCEEEEEEEECSCSCCCC-SSCEEEEEEGGGHHHHHHHHHHHHHHC------CSSCEEEEEEES
T ss_pred hhccC----------CCCEEEEECCccceEeCCC-CceEEEEEccccHhHHHHHHHHHHHcC------CCCeEEEEEEeC
Confidence 86665 6999999999999876543 489999999999999999999998763 247899999999
Q ss_pred CcchhhhHHhHHHHhhhccCCCceeEEEEEEeCCCCCcchhhhhhchhhhhhhhccCCCceeEEecCCchHHHHHHHHHH
Q 008159 328 SSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSSVTVREVLNDLSLVRAVRFGTQSNYAVNGLESLIWMAALVGIT 407 (575)
Q Consensus 328 ~~~~l~~~~~l~~~l~~~~~~~~~l~~~~~vT~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vcGp~~~~~~~~v~~~~ 407 (575)
+.+++.+.+++.++..+ ..+++++.+++++++.+. .+|++++....+.+.. ....+|+|||.+ |++++.+.+
T Consensus 249 ~~~d~~~~~el~~l~~~----~~~~~~~~~~s~~~~~~~-~~g~v~~~l~~~~~~~-~~~~vy~CGp~~--m~~~v~~~l 320 (338)
T 1krh_A 249 QDCDLVALEQLDALQQK----LPWFEYRTVVAHAESQHE-RKGYVTGHIEYDWLNG-GEVDVYLCGPVP--MVEAVRSWL 320 (338)
T ss_dssp SGGGCCCHHHHHHHHHH----CTTEEEEEEETTCCSSSS-EESCSGGGCCGGGGGG-GCSEEEEEEEHH--HHHHHHHHH
T ss_pred CHHHhhhHHHHHHHHHh----CCCeEEEEEEecCCCCCC-ccCccCHHHHHhhccc-CCcEEEEECCHH--HHHHHHHHH
Confidence 99999999998876432 246889989998765433 5677766543222222 346799999999 999999888
Q ss_pred HH
Q 008159 408 SI 409 (575)
Q Consensus 408 ~~ 409 (575)
..
T Consensus 321 ~~ 322 (338)
T 1krh_A 321 DT 322 (338)
T ss_dssp HH
T ss_pred HH
Confidence 76
No 13
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A*
Probab=99.96 E-value=2.4e-29 Score=251.77 Aligned_cols=214 Identities=19% Similarity=0.224 Sum_probs=163.8
Q ss_pred CceeEEEEEEecCCeEEEEEecCCCCcccCCeEEEEEeCCCCCCccccCccccCCCCCCCcEEEEEEeC--CCccHHHHH
Q 008159 172 PETCILSARVFPSKAIELILPKHAGLKFTPTSVIFMKIPSISKFQWHSFSITSSSSVDDQTMSLIVKCD--GEWTSSLYQ 249 (575)
Q Consensus 172 ~~~~v~~~~~~~~~~~~l~~~~~~~~~~~pGQ~v~l~~p~~~~~~~hpfSI~s~p~~~~~~l~l~Ik~~--G~~T~~L~~ 249 (575)
...+|++++.+++++++++++.+..+.|+||||++|++|..+..++|||||+|.|. ++.++++||+. |.+|++|.
T Consensus 20 ~~~~V~~~~~~~~~~~~~~l~~~~~~~~~pGQ~v~l~~~~~~~~~~r~ySi~s~~~--~~~~~~~v~~~~~G~~s~~l~- 96 (271)
T 4fk8_A 20 DTATVLSVHHWTDTLFSFTCTRDQALRFNNGEFTMVGLEVDGKPLTRAYSIVSPNY--EEHLEFFSIKVQNGPLTSRLQ- 96 (271)
T ss_dssp EEEEEEEEEEEETTEEEEEECCCTTCCCCTTCEEEEEEEETTEEEEEEEECCSCTT--SSSEEEEEECCTTCTTHHHHT-
T ss_pred eeEEEEEEEEcCCCEEEEEEEcCCCCCcCCCCEEEEEccCCCceeeeeEeccCCCC--CCcEEEEEEEECCCchhhHHh-
Confidence 35778999999999999999988788999999999999977767899999999874 56899999986 99999995
Q ss_pred HHHhcccCCcccCcceeEEEe-CCCCCCCCCc-CCCCeEEEEEeCCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeC
Q 008159 250 MIHAELDSDADQMRCIPVAIE-GPYGPATMDF-LRYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIK 327 (575)
Q Consensus 250 ~~~~~~~~~~~~~~g~~v~v~-GPyG~~~~~~-~~~~~vvlIagGiGITP~lsil~~l~~~~~~~~~~~~~~v~li~~~r 327 (575)
.++ +|+.+.++ ||||.+..+. ..+++++|||||+||||++||++++...+ ..++++|+|++|
T Consensus 97 ~l~----------~Gd~v~v~~gP~G~~~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~~------~~~~v~l~~~~r 160 (271)
T 4fk8_A 97 HLK----------VGDPVLIGKKPTGTLVADNLLPGKTLWMLSTGTGLAPFMSIIRDPDIYE------RFDKVVLTHTCR 160 (271)
T ss_dssp TCC----------TTCEEEEESCCBCSCCGGGBCCCSEEEEEECGGGGHHHHHHTTCHHHHH------HCSEEEEEECCC
T ss_pred cCC----------CCCEEEEecCCCcceecCCcCCCCeEEEEECCEEHHHHHHHHHHHHhcC------CCCCEEEEEecC
Confidence 343 69999999 9999987653 36799999999999999999999987653 247899999999
Q ss_pred CcchhhhHHhHHHHhhhccCC----CceeEEEEEEeCCCCCcchhhhhhchhhhhhh----hc----cCCCceeEEecCC
Q 008159 328 SSQEICLLNSISPLLSNQQSK----KWHLTLKVFVTQEEQSSVTVREVLNDLSLVRA----VR----FGTQSNYAVNGLE 395 (575)
Q Consensus 328 ~~~~l~~~~~l~~~l~~~~~~----~~~l~~~~~vT~~~~~~~~~~g~~~~~~~~~~----~~----~~~~~~~~vcGp~ 395 (575)
+.+++.+.+++.++..+.... ..++++++.+++++. +.+|++++....+. .. ..+...+|+|||.
T Consensus 161 ~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~s~~~~---~~~G~v~~~~~~~~l~~~~~~~~~~~~~~~v~vCGp~ 237 (271)
T 4fk8_A 161 LKGELAYMDYIKHDLPGHEYLGDVIREKLVYYPTVTREEF---ENEGRITDLIASGKLFTDLDMPPFSPEQDRVMLCGST 237 (271)
T ss_dssp SHHHHHHHHHHHTCCTTCTTHHHHHHHHEEEEECC----------CCHHHHHHHHSHHHHHTTCCCCCTTTEEEEEEECH
T ss_pred CHHHHhHHHHHHHHHHhCccccccccceEEEEEEecCCcc---ccccccChHHhcchhhhhcccccCCCCCCEEEEECCH
Confidence 999999999987643211000 015667666666542 34567765443211 11 1235679999999
Q ss_pred chHHHHHHHHHHHH
Q 008159 396 SLIWMAALVGITSI 409 (575)
Q Consensus 396 ~~~~~~~v~~~~~~ 409 (575)
+ ||+++++.+.+
T Consensus 238 ~--m~~~v~~~l~~ 249 (271)
T 4fk8_A 238 A--MLKDTTELLKK 249 (271)
T ss_dssp H--HHHHHHHHHHH
T ss_pred H--HHHHHHHHHHH
Confidence 8 99999988776
No 14
>4g1v_A Flavohemoglobin; three domains: globin fold, antiparallel beta-barrel, alpha/ fold, RESP., FAD, oxidoreductase; HET: HEM FAD; 2.10A {Saccharomyces cerevisiae} PDB: 4g1b_A*
Probab=99.96 E-value=1.7e-28 Score=259.22 Aligned_cols=215 Identities=17% Similarity=0.211 Sum_probs=170.9
Q ss_pred CceeEEEEEEecCCeEEEEEecCC--CC-----cccCCeEEEEEeC----CCCCCccccCccccCCCCCCCcEEEEEEe-
Q 008159 172 PETCILSARVFPSKAIELILPKHA--GL-----KFTPTSVIFMKIP----SISKFQWHSFSITSSSSVDDQTMSLIVKC- 239 (575)
Q Consensus 172 ~~~~v~~~~~~~~~~~~l~~~~~~--~~-----~~~pGQ~v~l~~p----~~~~~~~hpfSI~s~p~~~~~~l~l~Ik~- 239 (575)
+..+|++++.+++++.++++..+. .+ .|+||||+.|+++ +.+..++|||||+|.|. ++.++|+||+
T Consensus 150 ~~~~V~~~~~~s~~i~~~~l~~~~~~~~~l~~~~~~pGQ~v~l~~~~~~~~~~~~~~R~ySi~s~p~--~~~~~i~Vk~~ 227 (399)
T 4g1v_A 150 KPFEITAKEYVASDIVEFTVKPKFGSGIELESLPITPGQYITVNTHPIRQENQYDALRHYSLCSAST--KNGLRFAVKME 227 (399)
T ss_dssp EEEEEEEEEEEETTEEEEEEEECTTSCCCGGGCCCCTTCEEEEEECCCSTTCCSCEEEEEEBSCSCC--TTCEEEEEECC
T ss_pred eEEEEEEEEEcCCCeEEEEEEcCCCCcCCcCCCCCCCCCEEEEEEeCCCCCCccceeeeecccCCCC--CCeEEEEEEec
Confidence 456889999999999999997653 33 7999999999974 33346899999999984 5789999998
Q ss_pred -------CCCccHHHHHHHHhcccCCcccCcceeEEEeCCCCCCCCCcC----CCCeEEEEEeCCChhhHHHHHHHHHHh
Q 008159 240 -------DGEWTSSLYQMIHAELDSDADQMRCIPVAIEGPYGPATMDFL----RYDSLLLVAGGIGITPFLSILQEIASA 308 (575)
Q Consensus 240 -------~G~~T~~L~~~~~~~~~~~~~~~~g~~v~v~GPyG~~~~~~~----~~~~vvlIagGiGITP~lsil~~l~~~ 308 (575)
.|.+|++|++.++ +|+.+.|+||+|.|.++.. ..+++||||||+||||++||++++...
T Consensus 228 ~~~~~~~~G~~S~~L~~~l~----------~Gd~v~v~gP~G~f~l~~~~~~~~~~~~vlIagG~GitP~~s~l~~l~~~ 297 (399)
T 4g1v_A 228 AARENFPAGLVSEYLHKDAK----------VGDEIKLSAPAGDFAINKELIHQNEVPLVLLSSGVGVTPLLAMLEEQVKC 297 (399)
T ss_dssp CCBTTBCCCHHHHHHHHTCC----------TTCEEEEEEEECSCCCCTTTTTCSSSCEEEEEEGGGHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCEehhHHHhCCC----------CCCEEEEEecccceeeCcccccCCCCCEEEEecceeHhHHHHHHHHHHHc
Confidence 6779999987766 7999999999999877654 578999999999999999999999876
Q ss_pred hccCCCCCCceEEEEEEeCCcchhhhHHhHHHHhhhccCCCceeEEEEEEeCCCCCcchhhhhhchhhhhhhhccCCCce
Q 008159 309 QSNRKYRFPSKVQLIYVIKSSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSSVTVREVLNDLSLVRAVRFGTQSN 388 (575)
Q Consensus 309 ~~~~~~~~~~~v~li~~~r~~~~l~~~~~l~~~l~~~~~~~~~l~~~~~vT~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 388 (575)
+ ..++++++|++|+.+++.|.+++.++.. ..+++++++++++++ |+++.....+.. .+...
T Consensus 298 ~------~~~~v~l~~~~r~~~~~~~~~el~~l~~----~~~~~~~~~~~s~~~-------g~~~~~~l~~~~--~~~~~ 358 (399)
T 4g1v_A 298 N------PNRPIYWIQSSYDEKTQAFKKHVDELLA----ECANVDKIIVHTDTE-------PLINAAFLKEKS--PAHAD 358 (399)
T ss_dssp C------TTSCEEEEEEESSSTTSTTHHHHHHHHT----TCSSEEEEEEETTTS-------CCCCHHHHHHHS--CSSCE
T ss_pred C------CCCCEEEEEecCCHHHhhhHHHHHHHHH----hCCCcEEEEEEeCCC-------CcccHHHHHhhC--CCCCE
Confidence 3 2478999999999999999999987642 235688888888764 345433332222 22578
Q ss_pred eEEecCCchHHHHHHHHHHHHHHHHHHHHhheE
Q 008159 389 YAVNGLESLIWMAALVGITSILFVIFLISLNHI 421 (575)
Q Consensus 389 ~~vcGp~~~~~~~~v~~~~~~~~~~~~~~~~~~ 421 (575)
+|+|||.+ ||++++..+.. .|+....-|+
T Consensus 359 vyvCGp~~--m~~~v~~~L~~--~Gv~~~~i~~ 387 (399)
T 4g1v_A 359 VYTCGSLA--FMQAMIGHLKE--LEHRDDMIHY 387 (399)
T ss_dssp EEEEECHH--HHHHHHHHHHH--TTCCGGGEEE
T ss_pred EEEECCHH--HHHHHHHHHHH--cCCCHHHeee
Confidence 99999999 99999999877 5554333333
No 15
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis}
Probab=99.96 E-value=1.1e-28 Score=249.46 Aligned_cols=216 Identities=16% Similarity=0.238 Sum_probs=170.2
Q ss_pred ceeEEEEEEecCCeEEEEEecCC--CCcccCCeEEEEEeCCC-----------------------------CCCccccCc
Q 008159 173 ETCILSARVFPSKAIELILPKHA--GLKFTPTSVIFMKIPSI-----------------------------SKFQWHSFS 221 (575)
Q Consensus 173 ~~~v~~~~~~~~~~~~l~~~~~~--~~~~~pGQ~v~l~~p~~-----------------------------~~~~~hpfS 221 (575)
.++|++++.+++++.++++..+. .+.|+||||+.|.+|.. +..++||||
T Consensus 11 ~~~V~~~~~~t~~~~~l~l~~~~~~~~~~~pGQ~v~l~~p~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~R~yS 90 (290)
T 2r6h_A 11 ECEVLSNKNVSTFIKEFVVKLPEGETMNFKSGSYAQIKIPKYNIRYADYDIQDRFRGDWDKMDAWSLTCKNEEETVRAYS 90 (290)
T ss_dssp EEEEEEEEESSSSEEEEEEECSTTCCCCCCTTCEEEEEECSEEEEGGGCCCCTTTHHHHHHTTGGGCEEEECSCEEEEEE
T ss_pred EEEEEEeeecCCCeEEEEEEcCCCCccccCCCceEEEEcccccccccccccchhhcccccccccccccccCCCCcceeee
Confidence 46789999999999999998764 57899999999999852 346789999
Q ss_pred cccCCCCCCCcEEEEEEe-----------------CCCccHHHHHHHHhcccCCcccCcceeEEEeCCCCCCCCCcCCCC
Q 008159 222 ITSSSSVDDQTMSLIVKC-----------------DGEWTSSLYQMIHAELDSDADQMRCIPVAIEGPYGPATMDFLRYD 284 (575)
Q Consensus 222 I~s~p~~~~~~l~l~Ik~-----------------~G~~T~~L~~~~~~~~~~~~~~~~g~~v~v~GPyG~~~~~~~~~~ 284 (575)
|+|.|. +++.++|+||. .|.+|++|++ ++ +|+.+.|.||+|.+..+ ...+
T Consensus 91 i~s~~~-~~~~l~l~v~~~~~~~~~~~~~~~~~~~~G~~S~~l~~-l~----------~Gd~v~v~gP~G~f~~~-~~~~ 157 (290)
T 2r6h_A 91 MANYPA-EGNIITLNVRIATPPFDRAANKWKAGIKPGISSSYIFS-LK----------PGDKVMMSGPYGDFHIQ-DTDA 157 (290)
T ss_dssp CCSCTT-CCSEEEEEEECCCCCEETTTTEECTTCCCCHHHHHHTT-CC----------TTCEEEEEEEECCCCCC-SSSC
T ss_pred ccCCCC-CCCEEEEEEEEeccccccccccccccCCCcchhhHHhc-CC----------CCCEEEEEecccCCcCC-CCCC
Confidence 999986 56789999996 5778999986 44 69999999999999764 4678
Q ss_pred eEEEEEeCCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeCCcchhhhHHhHHHHhhhccCCCceeEEEEEEeCCCC-
Q 008159 285 SLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIKSSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQ- 363 (575)
Q Consensus 285 ~vvlIagGiGITP~lsil~~l~~~~~~~~~~~~~~v~li~~~r~~~~l~~~~~l~~~l~~~~~~~~~l~~~~~vT~~~~- 363 (575)
++|||||||||||++||+++++.... ...+++|+|++|+.+++.+.+++.++..+ ..++++++.+++++.
T Consensus 158 ~~vliagGtGitP~~s~l~~~~~~~~-----~~~~v~l~~~~r~~~d~~~~~el~~l~~~----~~~~~~~~~~s~~~~~ 228 (290)
T 2r6h_A 158 EMLYIGGGAGMAPLRAQILHLFRTLK-----TGRKVSYWYGARSKNEIFYEEDFREIERE----FPNFKFHIALSDPQPE 228 (290)
T ss_dssp EEEEEEEGGGHHHHHHHHHHHHHTSC-----CCSCEEEEEEESSGGGCCSHHHHHHHHHH----CTTEEEEEEESSCCGG
T ss_pred eEEEEECccCHHHHHHHHHHHHHhcC-----CCCcEEEEEEcCCHHHHHHHHHHHHHHHh----CCCeEEEEEEccCCcc
Confidence 99999999999999999999886421 24789999999999999999999876422 246888888887642
Q ss_pred -Ccchhhhhhchhhhhhhhcc---CCCceeEEecCCchHHHHHHHHHHHHHHHHH
Q 008159 364 -SSVTVREVLNDLSLVRAVRF---GTQSNYAVNGLESLIWMAALVGITSILFVIF 414 (575)
Q Consensus 364 -~~~~~~g~~~~~~~~~~~~~---~~~~~~~vcGp~~~~~~~~v~~~~~~~~~~~ 414 (575)
.+.+.+|++++....+.+.. .+...+|+|||.+ ||+++.+.+.. .|+
T Consensus 229 ~~~~g~~g~v~~~~~~~~l~~~~~~~~~~vyvCGp~~--m~~~v~~~l~~--~G~ 279 (290)
T 2r6h_A 229 DNWTGYVGFIHQVIYDNYLKDHDAPEDIEYYMCGPGP--MANAVKGMLEN--LGV 279 (290)
T ss_dssp GCCCSCBSCHHHHHHHHTTTTCSCGGGEEEEEECCHH--HHHHHHHHHHH--HTC
T ss_pred cCCCCeeEecCHHHHHhHHhhccCcCCcEEEEECCHH--HHHHHHHHHHH--cCC
Confidence 23445677766543332211 1235789999998 99999998876 454
No 16
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5
Probab=99.96 E-value=5.8e-29 Score=262.64 Aligned_cols=217 Identities=14% Similarity=0.152 Sum_probs=172.6
Q ss_pred CceeEEEEEEecCCeEEEEEecCC---CCcccCCeEEEEEeCCCC--CCccccCccccCCCCCCCcEEEEEEeC--CCcc
Q 008159 172 PETCILSARVFPSKAIELILPKHA---GLKFTPTSVIFMKIPSIS--KFQWHSFSITSSSSVDDQTMSLIVKCD--GEWT 244 (575)
Q Consensus 172 ~~~~v~~~~~~~~~~~~l~~~~~~---~~~~~pGQ~v~l~~p~~~--~~~~hpfSI~s~p~~~~~~l~l~Ik~~--G~~T 244 (575)
...+|++++.+++++.++++..+. ...|+||||+.|++|..+ ..++|||||+|.|. ++.++|+||+. |.+|
T Consensus 153 ~~~~V~~~~~~s~~i~~~~l~~~~~~~~~~~~pGQ~v~l~~~~~~~~~~~~R~YSi~s~p~--~~~~~i~Vk~~~~G~~S 230 (396)
T 1gvh_A 153 RDFRIVAKTPRSALITSFELEPVDGGAVAEYRPGQYLGVWLKPEGFPHQEIRQYSLTRKPD--GKGYRIAVKREEGGQVS 230 (396)
T ss_dssp EEEEEEEEEECSSSEEEEEEEETTCCCCCCCCTTCEEEEEECCTTCSSCEEEEEECCSCCC--SSCEEEEEECCTTCHHH
T ss_pred EEEEEEEEEEcCCCeEEEEEEeCCCCcCCCCCCCCeEEEEecCCCCccceeecceeccCCC--CCeEEEEEEEcCCCcch
Confidence 357889999999999999998753 258999999999998544 25799999999985 57899999996 9999
Q ss_pred HHHHHHHHhcccCCcccCcceeEEEeCCCCCCCCCcCCCCeEEEEEeCCChhhHHHHHHHHHHhhccCCCCCCceEEEEE
Q 008159 245 SSLYQMIHAELDSDADQMRCIPVAIEGPYGPATMDFLRYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIY 324 (575)
Q Consensus 245 ~~L~~~~~~~~~~~~~~~~g~~v~v~GPyG~~~~~~~~~~~vvlIagGiGITP~lsil~~l~~~~~~~~~~~~~~v~li~ 324 (575)
++|++.++ +|+.+.+.||+|.|.++....++++|||||+||||++||++++...+ ..++++++|
T Consensus 231 ~~L~~~l~----------~Gd~v~v~gP~G~f~l~~~~~~~~vlIagGtGitP~~s~l~~l~~~~------~~~~v~l~~ 294 (396)
T 1gvh_A 231 NWLHNHAN----------VGDVVKLVAPAGDFFMAVADDTPVTLISAGVGQTPMLAMLDTLAKAG------HTAQVNWFH 294 (396)
T ss_dssp HHHHHTCC----------TTCEEEEEEEECSCCCCCCTTCCEEEEEEGGGGHHHHHHHHHHHHHT------CCSCEEEEE
T ss_pred HHHHhcCC----------CCCEEEEEcCCcceECCCCCCCCEEEEecchhHhHHHHHHHHHHhcC------CCCcEEEEE
Confidence 99998665 69999999999998765446789999999999999999999998753 247899999
Q ss_pred EeCCcchhhhHHhHHHHhhhccCCCceeEEEEEEeCCCCCc-----chhhhhhchhhhhhhhccCCCceeEEecCCchHH
Q 008159 325 VIKSSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSS-----VTVREVLNDLSLVRAVRFGTQSNYAVNGLESLIW 399 (575)
Q Consensus 325 ~~r~~~~l~~~~~l~~~l~~~~~~~~~l~~~~~vT~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~vcGp~~~~~ 399 (575)
++|+.+++.+.+++.++.. +.+++++++++++++..+ .+..|++++....+... .+...+|+|||.+ |
T Consensus 295 ~~r~~~~~~~~~el~~l~~----~~~~~~~~~~~s~~~~~~~~~~~~~~~G~~~~~~l~~~~~-~~~~~vyvCGp~~--m 367 (396)
T 1gvh_A 295 AAENGDVHAFADEVKELGQ----SLPRFTAHTWYRQPSEADRAKGQFDSEGLMDLSKLEGAFS-DPTMQFYLCGPVG--F 367 (396)
T ss_dssp EESCTTTCCSHHHHHHHHH----TSSSEEEEEEESSCCHHHHHHTCCSEESSCCGGGSSSCCC-CTTCEEEEESCHH--H
T ss_pred EeCCHHHhhhHHHHHHHHH----HCCCeEEEEEECCCCccccccCccCccCcCCHHHHhhccC-CCCCEEEEeCCHH--H
Confidence 9999999999999887643 235688888888865321 12456776543322111 1257899999999 9
Q ss_pred HHHHHHHHHHHHHHHH
Q 008159 400 MAALVGITSILFVIFL 415 (575)
Q Consensus 400 ~~~v~~~~~~~~~~~~ 415 (575)
|+++...+.. .|+.
T Consensus 368 ~~~v~~~L~~--~Gv~ 381 (396)
T 1gvh_A 368 MQFTAKQLVD--LGVK 381 (396)
T ss_dssp HHHHHHHHHH--TTCC
T ss_pred HHHHHHHHHH--cCCC
Confidence 9999998876 5553
No 17
>1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet, helix-FLA five-stranded parallel beta sheet, lipid binding protein; HET: HEM FAD DGG; 1.75A {Cupriavidus necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 PDB: 3ozu_A* 3ozv_B* 3ozw_A*
Probab=99.96 E-value=2.9e-28 Score=257.82 Aligned_cols=215 Identities=18% Similarity=0.239 Sum_probs=171.1
Q ss_pred ceeEEEEEEecCCeEEEEEecCC---CCcccCCeEEEEEeCCCC-C-CccccCccccCCCCCCCcEEEEEEeC-------
Q 008159 173 ETCILSARVFPSKAIELILPKHA---GLKFTPTSVIFMKIPSIS-K-FQWHSFSITSSSSVDDQTMSLIVKCD------- 240 (575)
Q Consensus 173 ~~~v~~~~~~~~~~~~l~~~~~~---~~~~~pGQ~v~l~~p~~~-~-~~~hpfSI~s~p~~~~~~l~l~Ik~~------- 240 (575)
..+|++++.+++++.++++..+. ...|+||||+.|++|..+ . .++|||||+|.|. ++.++|+||+.
T Consensus 156 ~~~V~~~~~~s~~i~~~~l~~~~~~~~~~~~pGQ~v~l~~~~~~~~~~~~R~YSi~s~p~--~~~~~i~Vk~~~~~~~~~ 233 (403)
T 1cqx_A 156 TFVIREKRPESDVITSFILEPADGGPVVNFEPGQYTSVAIDVPALGLQQIRQYSLSDMPN--GRTYRISVKREGGGPQPP 233 (403)
T ss_dssp EEEEEEEEECSSSEEEEEEEETTCCCCCCCCTTCEEEEEEEETTTTEEEEEEEECCSCCC--SSCEEEEEECCCBTTBCC
T ss_pred eEEEEEEEEcCCCeEEEEEEeCCCCcCCCCCCCCEEEEEEecCCCCcceeecceecCCCC--CCeEEEEEEECCCCCCCC
Confidence 57889999999999999997653 258999999999998432 2 5789999999884 57899999986
Q ss_pred CCccHHHHHHHHhcccCCcccCcceeEEEeCCCCCCCCCcCCCCeEEEEEeCCChhhHHHHHHHHHHhhccCCCCCCceE
Q 008159 241 GEWTSSLYQMIHAELDSDADQMRCIPVAIEGPYGPATMDFLRYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKV 320 (575)
Q Consensus 241 G~~T~~L~~~~~~~~~~~~~~~~g~~v~v~GPyG~~~~~~~~~~~vvlIagGiGITP~lsil~~l~~~~~~~~~~~~~~v 320 (575)
|.+|++|++.++ +|+.+.|.||+|.|.++....++++|||||+||||++||++++.. + ..+++
T Consensus 234 G~~S~~L~~~l~----------~Gd~v~v~gP~G~f~l~~~~~~~~vlIagGtGitP~~s~l~~l~~-~------~~~~v 296 (403)
T 1cqx_A 234 GYVSNLLHDHVN----------VGDQVKLAAPYGSFHIDVDAKTPIVLISGGVGLTPMVSMLKVALQ-A------PPRQV 296 (403)
T ss_dssp CHHHHHHHHHCC----------TTCEEEECCCBCSCSCCTTCCSCEEEEESSCCHHHHHHHHHHHTC-S------SCCCE
T ss_pred CeehHHHhhCCC----------CCCEEEEecCccCcccCCCCCCCEEEEEecccHhhHHHHHHHHHh-C------CCCcE
Confidence 779999998766 799999999999987654567899999999999999999999875 2 24789
Q ss_pred EEEEEeCCcchhhhHHhHHHHhhhccCCCceeEEEEEEeCCCCCc-----chhhhhhchhhhhhhhccCCCceeEEecCC
Q 008159 321 QLIYVIKSSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSS-----VTVREVLNDLSLVRAVRFGTQSNYAVNGLE 395 (575)
Q Consensus 321 ~li~~~r~~~~l~~~~~l~~~l~~~~~~~~~l~~~~~vT~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~vcGp~ 395 (575)
+++|++|+.+++.+.+++.++..+ .+++++++++++++..+ ....|++++....+.... +...+|+|||.
T Consensus 297 ~l~~~~r~~~~~~~~~el~~l~~~----~~~~~~~~~~s~~~~~~~~~~~~~~~G~i~~~~l~~~~~~-~~~~vyvCGp~ 371 (403)
T 1cqx_A 297 VFVHGARNSAVHAMRDRLREAAKT----YENLDLFVFYDQPLPEDVQGRDYDYPGLVDVKQIEKSILL-PDADYYICGPI 371 (403)
T ss_dssp EEEEEESCSSSCHHHHHHHHHHHH----CTTEEEEEEESSCCTTCCBTTTBSEESSCCGGGSHHHHCC-TTCEEEEESSH
T ss_pred EEEEEeCChhhCcHHHHHHHHHHh----CCCcEEEEEECCCCcccccccccCcCCCcCHHHHhhccCC-CCCEEEEeCCH
Confidence 999999999999999998876432 24688888888865432 234577775433332112 25789999999
Q ss_pred chHHHHHHHHHHHHHHHHHH
Q 008159 396 SLIWMAALVGITSILFVIFL 415 (575)
Q Consensus 396 ~~~~~~~v~~~~~~~~~~~~ 415 (575)
+ ||+++...+.. .|+.
T Consensus 372 ~--m~~~v~~~L~~--~Gv~ 387 (403)
T 1cqx_A 372 P--FMRMQHDALKN--LGIH 387 (403)
T ss_dssp H--HHHHHHHHHHH--TTCC
T ss_pred H--HHHHHHHHHHH--cCCC
Confidence 9 99999998877 5553
No 18
>1fnb_A Ferredoxin-NADP+ reductase; oxidoreductase (NADP+(A),ferredoxin(A)); HET: FAD; 1.70A {Spinacia oleracea} SCOP: b.43.4.2 c.25.1.1 PDB: 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 1qg0_A* 1qga_A* 1qfz_A* 1qfy_A* 1gaw_A* 1gaq_A* 3mhp_A* 1sm4_A* 2xnc_A*
Probab=99.96 E-value=1.2e-27 Score=244.65 Aligned_cols=220 Identities=15% Similarity=0.207 Sum_probs=166.6
Q ss_pred ceeEEEEEEecC-----CeEEEEEecCCCCcccCCeEEEEEeCCC----CCCccccCccccCCCC---CCCcEEEEEEe-
Q 008159 173 ETCILSARVFPS-----KAIELILPKHAGLKFTPTSVIFMKIPSI----SKFQWHSFSITSSSSV---DDQTMSLIVKC- 239 (575)
Q Consensus 173 ~~~v~~~~~~~~-----~~~~l~~~~~~~~~~~pGQ~v~l~~p~~----~~~~~hpfSI~s~p~~---~~~~l~l~Ik~- 239 (575)
..+|++++.+++ ++.++++..+..+.|+||||+.|.+|.. .+.++|||||+|+|.. +++.++|+||.
T Consensus 39 ~~~V~~~~~lt~~~~~~~v~~l~l~~~~~~~~~pGQ~v~l~~~~~~~~g~~~~~R~ySi~s~p~~~~~~~~~~~l~Vk~~ 118 (314)
T 1fnb_A 39 VGRCLLNTKITGDDAPGETWHMVFSHEGEIPYREGQSVGVIPDGEDKNGKPHKLRLYSIASSALGDFGDAKSVSLCVKRL 118 (314)
T ss_dssp EEEEEEEEECSCSSSSSCEEEEEEECTTCCCCCTTCEEEEECSSBCTTSSBCCCEEEECCSCSSCTTSSSCEEEEEEECC
T ss_pred EEEEEEEEEecCCCCCCcEEEEEEecCCCCCcCCCCEEEEecCCCCcCCCcCCceeEecCCCCcccCCCCCEEEEEEEEE
Confidence 467889999986 8999999887678999999999999864 2457899999999852 25789999996
Q ss_pred ----------CCCccHHHHHHHHhcccCCcccCcceeEEEeCCCCCCCC-CcCCCCeEEEEEeCCChhhHHHHHHHHHHh
Q 008159 240 ----------DGEWTSSLYQMIHAELDSDADQMRCIPVAIEGPYGPATM-DFLRYDSLLLVAGGIGITPFLSILQEIASA 308 (575)
Q Consensus 240 ----------~G~~T~~L~~~~~~~~~~~~~~~~g~~v~v~GPyG~~~~-~~~~~~~vvlIagGiGITP~lsil~~l~~~ 308 (575)
.|.+|++|++ ++ +|+.+.|+||+|.+.. +....+++|||||||||||++||+++++..
T Consensus 119 ~y~~~~g~~~~G~~S~~L~~-l~----------~Gd~v~v~gP~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~ 187 (314)
T 1fnb_A 119 IYTNDAGETIKGVCSNFLCD-LK----------PGAEVKLTGPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFE 187 (314)
T ss_dssp EEECTTSCEEECHHHHHHHH-CC----------TTCEEEEEEEECSTTCCBSCTTCEEEEEEEGGGGHHHHHHHHHHHTC
T ss_pred EeccCCCCcCCCchhhHhhc-CC----------CCCEEEEEeccCCceeCCCCCCCCEEEEeCCccHHHHHHHHHHHHHh
Confidence 3888999987 44 6999999999998753 223468999999999999999999999864
Q ss_pred hccCCCCCCceEEEEEEeCCcchhhhHHhHHHHhhhccCCCceeEEEEEEeCCCCCcchhhhhhchhhhhh--hh--ccC
Q 008159 309 QSNRKYRFPSKVQLIYVIKSSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSSVTVREVLNDLSLVR--AV--RFG 384 (575)
Q Consensus 309 ~~~~~~~~~~~v~li~~~r~~~~l~~~~~l~~~l~~~~~~~~~l~~~~~vT~~~~~~~~~~g~~~~~~~~~--~~--~~~ 384 (575)
+.. ......+++|+|++|+.+++.|.+++.++..+. ..+++++..+|+++..+.+.++.+++..... .+ ...
T Consensus 188 ~~~-~~~~~~~v~L~~g~R~~~d~~~~~el~~l~~~~---~~~~~~~~~~s~~~~~~~g~~~~v~~~l~~~~~~~~~~~~ 263 (314)
T 1fnb_A 188 KHD-DYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKA---PDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWEMLK 263 (314)
T ss_dssp CBT-TBCCCSEEEEEEEESSGGGCCSHHHHHHHHHHC---TTTEEEEEEETTTCBCTTCCBCCHHHHHHTTHHHHHHHTT
T ss_pred ccc-cccCCCCEEEEEecCCHHHhhhHHHHHHHHHhC---CCcEEEEEEECCCCcccCCCceechHHHHHhHHHHHHHHh
Confidence 211 111236899999999999999999998764321 1368888889987654433344444332211 11 121
Q ss_pred -CCceeEEecCCchHHHHHHHHHHHH
Q 008159 385 -TQSNYAVNGLESLIWMAALVGITSI 409 (575)
Q Consensus 385 -~~~~~~vcGp~~~~~~~~v~~~~~~ 409 (575)
+...+|+|||.+ ||+++.+.+..
T Consensus 264 ~~~~~vyvCGp~~--m~~~v~~~L~~ 287 (314)
T 1fnb_A 264 KDNTYVYMCGLKG--MEKGIDDIMVS 287 (314)
T ss_dssp STTEEEEEEECTT--HHHHHHHHHHH
T ss_pred cCCeEEEEECCHH--HHHHHHHHHHH
Confidence 356799999999 99999988776
No 19
>2qdx_A Ferredoxin reductase; oxidoreductase; HET: FAD; 1.55A {Pseudomonas aeruginosa} PDB: 3crz_A* 1a8p_A*
Probab=99.95 E-value=2.1e-28 Score=243.02 Aligned_cols=213 Identities=19% Similarity=0.245 Sum_probs=166.3
Q ss_pred ceeEEEEEEecCCeEEEEEecCCCCcccCCeEEEEEeCCCCCCccccCccccCCCCCCCcEEEEEEeC--CCccHHHHHH
Q 008159 173 ETCILSARVFPSKAIELILPKHAGLKFTPTSVIFMKIPSISKFQWHSFSITSSSSVDDQTMSLIVKCD--GEWTSSLYQM 250 (575)
Q Consensus 173 ~~~v~~~~~~~~~~~~l~~~~~~~~~~~pGQ~v~l~~p~~~~~~~hpfSI~s~p~~~~~~l~l~Ik~~--G~~T~~L~~~ 250 (575)
..+|++++.++++++++++..+..+.|+||||+.|.+|..+..++|||||+|.|. ++.++++||.. |.+|++|.+
T Consensus 5 ~~~V~~~~~~~~~~~~l~l~~~~~~~~~pGq~v~l~~~~~g~~~~R~ySi~s~~~--~~~~~~~i~~~~~G~~s~~l~~- 81 (257)
T 2qdx_A 5 TERVLSVHHWNDTLFSFKTTRNPGLRFKTGQFVMIGLEVDGRPLMRAYSIASPNY--EEHLEFFSIKVPDGPLTSRLQH- 81 (257)
T ss_dssp EEEEEEEEEEETTEEEEEEECCTTCCCCTTCEEEEEEEETTEEEEEEEECCSCTT--SSEEEEEEECCTTCTTHHHHTT-
T ss_pred EEEEEEEEEcCCCeEEEEEeCCCCCccCCCCEEEEEecCCCCceeeeeEeecCCC--CCeEEEEEEEeCCCcchhHHHh-
Confidence 4678899999999999999888778999999999999876667899999999985 47899999985 999999963
Q ss_pred HHhcccCCcccCcceeEEEe-CCCCCCCCCcC-CCCeEEEEEeCCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeCC
Q 008159 251 IHAELDSDADQMRCIPVAIE-GPYGPATMDFL-RYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIKS 328 (575)
Q Consensus 251 ~~~~~~~~~~~~~g~~v~v~-GPyG~~~~~~~-~~~~vvlIagGiGITP~lsil~~l~~~~~~~~~~~~~~v~li~~~r~ 328 (575)
++ +|+.+.|. ||+|.+..+.. ..++++||||||||||+++|++++...+ ...+++|+|++|+
T Consensus 82 l~----------~Gd~v~v~~gp~G~f~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~~------~~~~v~l~~~~r~ 145 (257)
T 2qdx_A 82 LK----------EGDELMVSRKPTGTLVHDDLLPGKHLYLLSTGTGMAPFLSVIQDPETYE------RYEKVILVHGVRW 145 (257)
T ss_dssp CC----------TTCEEEECSCCBCSCCGGGBCSCSEEEEEEEGGGGHHHHHHTTCHHHHH------HCSEEEEEEEESS
T ss_pred CC----------CCCEEEEecCCCCCccCCcccCCCeEEEEEeceEHHHHHHHHHHHHhcC------CCCeEEEEEEcCC
Confidence 44 69999999 99999865433 3789999999999999999999987653 1378999999999
Q ss_pred cchhhhHHhHH-HHhhhccC-C--CceeEEEEEEeCCCCCcchhhhhhchhhhhhh----hc---c-CCCceeEEecCCc
Q 008159 329 SQEICLLNSIS-PLLSNQQS-K--KWHLTLKVFVTQEEQSSVTVREVLNDLSLVRA----VR---F-GTQSNYAVNGLES 396 (575)
Q Consensus 329 ~~~l~~~~~l~-~~l~~~~~-~--~~~l~~~~~vT~~~~~~~~~~g~~~~~~~~~~----~~---~-~~~~~~~vcGp~~ 396 (575)
.+++.+.+++. ++..+... + ..+++++..+|+++. +.+|++++....+. .. . .+...+|+|||.+
T Consensus 146 ~~~~~~~~el~~~l~~~~~~~~~~~~~~~~~~~~s~~~~---~~~g~v~~~l~~~~l~~~~~~~~~~~~~~~vyvCGp~~ 222 (257)
T 2qdx_A 146 VSELAYADFITKVLPEHEYFGDQVKEKLIYYPLVTREPF---RNQGRQTDLMRSGKLFEDIGLPPMNPQDDRAMICGSPS 222 (257)
T ss_dssp GGGCTTHHHHHTTGGGCTTTHHHHHHHEEEEEEESSSCC---SSBSCHHHHHHHSHHHHHHTCCCCCTTTEEEEEEECHH
T ss_pred HHHhHhHHHHHHHHHhchhhhccCCCcEEEEEEecCCCc---ccCceechhhhhhhHHHhcccccCCcCCCEEEEECCHH
Confidence 99999999987 64220000 0 146888888887742 23455655433211 11 1 2346799999998
Q ss_pred hHHHHHHHHHHHH
Q 008159 397 LIWMAALVGITSI 409 (575)
Q Consensus 397 ~~~~~~v~~~~~~ 409 (575)
||+++.+.+..
T Consensus 223 --m~~~v~~~l~~ 233 (257)
T 2qdx_A 223 --MLEETSAVLDS 233 (257)
T ss_dssp --HHHHHHHHHHH
T ss_pred --HHHHHHHHHHH
Confidence 99999988766
No 20
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A*
Probab=99.95 E-value=3.7e-28 Score=242.95 Aligned_cols=217 Identities=17% Similarity=0.186 Sum_probs=165.4
Q ss_pred CceeEEEEEEecCCeEEEEEecCC---CCcccCCeEEEEEeCCCCCCccccCccccCCCCCCCcEEEEEEeC--------
Q 008159 172 PETCILSARVFPSKAIELILPKHA---GLKFTPTSVIFMKIPSISKFQWHSFSITSSSSVDDQTMSLIVKCD-------- 240 (575)
Q Consensus 172 ~~~~v~~~~~~~~~~~~l~~~~~~---~~~~~pGQ~v~l~~p~~~~~~~hpfSI~s~p~~~~~~l~l~Ik~~-------- 240 (575)
...+|++++.+++++.++++..+. .+.|+||||++|.++..+..++|||||+|.|. +++.++|+||..
T Consensus 13 ~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~pGQ~v~l~~~~~g~~~~R~ySi~s~~~-~~~~~~l~vk~~~~~~~~~~ 91 (270)
T 2cnd_A 13 IHCRLVAKKELSRDVRLFRFSLPSPDQVLGLPIGKHIFVCATIEGKLCMRAYTPTSMVD-EIGHFDLLVKVYFKNEHPKF 91 (270)
T ss_dssp EEEEEEEEEEEETTEEEEEEECSSTTCCCCCCTTCEEEEEEEETTEEEEEEECCCSCTT-CCSEEEEEEECCCSSCBTTB
T ss_pred EEEEEEEEEEeCCCeEEEEEECCCCccccCCCCCCEEEEEeeeCCcEEEEeeccCCCcc-CCCEEEEEEEEeccCccccc
Confidence 346789999999999999887654 46899999999999876777899999999886 468999999973
Q ss_pred ---CCccHHHHHHHHhcccCCcccCcceeEEEeCCCCCC--------CCCc--CCCCeEEEEEeCCChhhHHHHHHHHHH
Q 008159 241 ---GEWTSSLYQMIHAELDSDADQMRCIPVAIEGPYGPA--------TMDF--LRYDSLLLVAGGIGITPFLSILQEIAS 307 (575)
Q Consensus 241 ---G~~T~~L~~~~~~~~~~~~~~~~g~~v~v~GPyG~~--------~~~~--~~~~~vvlIagGiGITP~lsil~~l~~ 307 (575)
|.+|++|. .++ +|+.+.|+||+|.+ .++. ...++++||||||||||+++|++++..
T Consensus 92 ~~~G~~s~~l~-~l~----------~Gd~v~v~gP~G~~~~~~~g~f~l~~~~~~~~~~vliagGtGiaP~~~~l~~l~~ 160 (270)
T 2cnd_A 92 PNGGLMTQYLD-SLP----------VGSYIDVKGPLGHVEYTGRGSFVINGKQRNARRLAMICGGSGITPMYQIIQAVLR 160 (270)
T ss_dssp TTCCHHHHHHH-HCC----------TTCEEEEEEEECSEECCSSSCEEETTEEECCSEEEEEEEGGGHHHHHHHHHHHHH
T ss_pred CCCCchhhHHh-cCC----------CCCEEEEECCcccceeccccceeccCCcccCCEEEEEeccccHHHHHHHHHHHHh
Confidence 77999995 444 69999999999974 2221 246899999999999999999999987
Q ss_pred hhccCCCCCCceEEEEEEeCCcchhhhHHhHHHHhhhccCCCceeEEEEEEeCC---CCCcchhhhhhchhhhhhhhccC
Q 008159 308 AQSNRKYRFPSKVQLIYVIKSSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQE---EQSSVTVREVLNDLSLVRAVRFG 384 (575)
Q Consensus 308 ~~~~~~~~~~~~v~li~~~r~~~~l~~~~~l~~~l~~~~~~~~~l~~~~~vT~~---~~~~~~~~g~~~~~~~~~~~~~~ 384 (575)
... ....+++|+|++|+.+++.+.+++.++..+. ..++++++.++++ +..+.+.+|++++....+.+...
T Consensus 161 ~~~----~~~~~v~l~~~~r~~~d~~~~~el~~l~~~~---~~~~~~~~~~s~~~~~~~~~~~~~g~v~~~~l~~~l~~~ 233 (270)
T 2cnd_A 161 DQP----EDHTEMHLVYANRTEDDILLRDELDRWAAEY---PDRLKVWYVIDQVKRPEEGWKYSVGFVTEAVLREHVPEG 233 (270)
T ss_dssp TTT----TCCCEEEEEEEESCGGGCTTHHHHHHHHHHC---TTTEEEEEEESCCSCGGGCCCSEESSCCHHHHHHHSCCC
T ss_pred cCC----CCCcEEEEEEEcCCHHHcchHHHHHHHHHHC---cCcEEEEEEECCCCCCCCCcccccccCCHHHHHHhcCCC
Confidence 421 1247899999999999999999998764321 2367787777763 22233457888775443333222
Q ss_pred -CCceeEEecCCchHHHHH-HHHHHHH
Q 008159 385 -TQSNYAVNGLESLIWMAA-LVGITSI 409 (575)
Q Consensus 385 -~~~~~~vcGp~~~~~~~~-v~~~~~~ 409 (575)
....+|+|||.+ ||++ +...+.+
T Consensus 234 ~~~~~vyvCGp~~--m~~~~~~~~L~~ 258 (270)
T 2cnd_A 234 GDDTLALACGPPP--MIQFAISPNLEK 258 (270)
T ss_dssp SSSEEEEEECCHH--HHHTTTHHHHHT
T ss_pred cCCEEEEEECCHH--HHHHHHHHHHHH
Confidence 235689999999 9996 5666655
No 21
>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A*
Probab=99.95 E-value=8.8e-28 Score=240.49 Aligned_cols=213 Identities=17% Similarity=0.207 Sum_probs=166.1
Q ss_pred ceeEEEEEEecCCeEEEEEecCCCCcccCCeEEEEEeCC-CCCCccccCccccCCCCCCCcEEEEEEeC--CCccHHHHH
Q 008159 173 ETCILSARVFPSKAIELILPKHAGLKFTPTSVIFMKIPS-ISKFQWHSFSITSSSSVDDQTMSLIVKCD--GEWTSSLYQ 249 (575)
Q Consensus 173 ~~~v~~~~~~~~~~~~l~~~~~~~~~~~pGQ~v~l~~p~-~~~~~~hpfSI~s~p~~~~~~l~l~Ik~~--G~~T~~L~~ 249 (575)
.++|++++.++++++++++..+..+.|+||||+.|++|. .+..++|||||+|.|. ++.++++||.. |.+|++|.
T Consensus 18 ~~~V~~~~~~~~~~~~l~l~~~~~~~~~pGQ~v~l~~~~~~g~~~~R~ySi~s~~~--~~~~~l~v~~~~~G~~s~~l~- 94 (272)
T 2bgi_A 18 AQTVTSVRHWTDTLFSFRVTRPQTLRFRSGEFVMIGLLDDNGKPIMRAYSIASPAW--DEELEFYSIKVPDGPLTSRLQ- 94 (272)
T ss_dssp EEEEEEEEEEETTEEEEEEECCTTCCCCTTCEEEEEEECTTSCEEEEEEECCSCTT--CSEEEEEEECCTTCTTHHHHT-
T ss_pred EEEEEEEEEcCCCEEEEEEeCCCCCccCCCCEEEEEeccCCCCeeeeeeeeccCCC--CCeEEEEEEEccCCCchhHHH-
Confidence 467899999999999999988777889999999999985 3567899999999985 47899999985 99999996
Q ss_pred HHHhcccCCcccCcceeEEEe-CCCCCCCCCcC-CCCeEEEEEeCCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeC
Q 008159 250 MIHAELDSDADQMRCIPVAIE-GPYGPATMDFL-RYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIK 327 (575)
Q Consensus 250 ~~~~~~~~~~~~~~g~~v~v~-GPyG~~~~~~~-~~~~vvlIagGiGITP~lsil~~l~~~~~~~~~~~~~~v~li~~~r 327 (575)
.++ +|+.+.|. ||+|.+..+.. .+++++||||||||||+++|++++...+ ...+++|+|++|
T Consensus 95 ~l~----------~Gd~v~v~~gP~G~f~~~~~~~~~~~vliagG~GiaP~~~~l~~l~~~~------~~~~v~l~~~~r 158 (272)
T 2bgi_A 95 HIK----------VGEQIILRPKPVGTLVIDALLPGKRLWFLATGTGIAPFASLMREPEAYE------KFDEVIMMHACR 158 (272)
T ss_dssp TCC----------TTCEEEEEEEEECSCCGGGBCCCSEEEEEEEGGGGHHHHHHTTCGGGGT------SCSEEEEEEEES
T ss_pred hCC----------CCCEEEEeeCCCCcccccccccCCeEEEEeecccHHHHHHHHHHHHhcC------CCCcEEEEEEeC
Confidence 343 69999999 99999875533 3789999999999999999999887542 247899999999
Q ss_pred CcchhhhHHhHH-HHhhhccC-C--CceeEEEEEEeCCCCCcchhhhhhchhhhhhh----h--c-c-CCCceeEEecCC
Q 008159 328 SSQEICLLNSIS-PLLSNQQS-K--KWHLTLKVFVTQEEQSSVTVREVLNDLSLVRA----V--R-F-GTQSNYAVNGLE 395 (575)
Q Consensus 328 ~~~~l~~~~~l~-~~l~~~~~-~--~~~l~~~~~vT~~~~~~~~~~g~~~~~~~~~~----~--~-~-~~~~~~~vcGp~ 395 (575)
+.+++.|.+++. ++..+... + ..+++++..+|+++. +.+|++++...... . . . .+...+|+|||.
T Consensus 159 ~~~~~~~~~el~~~l~~~~~~~~~~~~~~~~~~~~s~~~~---~~~g~v~~~l~~~~l~~~~~~~~~~~~~~~vyvCGp~ 235 (272)
T 2bgi_A 159 TVAELEYGRQLVEALQEDPLIGELVEGKLKYYPTTTREEF---HHMGRITDNLASGKVFEDLGIAPMNPETDRAMVCGSL 235 (272)
T ss_dssp SSGGGHHHHHHHHHHHHCTTTTTTSTTTEEEEEEESSSCC---SSBCCHHHHHHSCHHHHHHTCCCCCTTTEEEEEEECH
T ss_pred CHHHhhHHHHHHHHHHhcchhhcccCCcEEEEEEecCCcc---ccCceechHHHhhhHhhhcccccCCCCCcEEEEECCH
Confidence 999999999998 65321000 1 257888888887732 23556665433211 1 1 1 134679999999
Q ss_pred chHHHHHHHHHHHH
Q 008159 396 SLIWMAALVGITSI 409 (575)
Q Consensus 396 ~~~~~~~v~~~~~~ 409 (575)
+ ||+++.+.+..
T Consensus 236 ~--m~~~v~~~l~~ 247 (272)
T 2bgi_A 236 A--FNVDVMKVLES 247 (272)
T ss_dssp H--HHHHHHHHHHT
T ss_pred H--HHHHHHHHHHH
Confidence 8 99999888765
No 22
>2bmw_A Ferredoxin--NADP reductase; oxidoreductase, flavoprotein, FAD, FNR, reductase reductase, phycobilisome, thylakoid; HET: FAD; 1.5A {Anabaena SP} SCOP: b.43.4.2 c.25.1.1 PDB: 1h42_A* 2vyq_A* 2vzl_A* 1ogi_A* 1ogj_A* 1gjr_A* 1e62_A* 1e64_A* 1quf_A* 1e63_A* 1go2_A* 1w34_A* 1b2r_A* 1w35_A* 1w87_A* 1que_A* 1ewy_A* 1gr1_A* 2bsa_A* 1bqe_A* ...
Probab=99.95 E-value=2.9e-27 Score=240.62 Aligned_cols=221 Identities=17% Similarity=0.231 Sum_probs=164.0
Q ss_pred ceeEEEEEEecC-----CeEEEEEecCC-CCcccCCeEEEEEeCCC---C-CCccccCccccCCCC---CCCcEEEEEEe
Q 008159 173 ETCILSARVFPS-----KAIELILPKHA-GLKFTPTSVIFMKIPSI---S-KFQWHSFSITSSSSV---DDQTMSLIVKC 239 (575)
Q Consensus 173 ~~~v~~~~~~~~-----~~~~l~~~~~~-~~~~~pGQ~v~l~~p~~---~-~~~~hpfSI~s~p~~---~~~~l~l~Ik~ 239 (575)
..+|++++.+++ ++.++++..+. .+.|+||||+.|.+|.. + ++++|||||+|+|.. +++.++|+||.
T Consensus 23 ~~~V~~~~~l~~~~~~~~v~~l~~~~~~~~~~~~pGQ~v~l~~~~~~~~g~~~~~R~ySias~~~~~~~~~~~l~l~Vk~ 102 (304)
T 2bmw_A 23 IGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIPPGVDKNGKPEKLRLYSIASTRHGDDVDDKTISLCVRQ 102 (304)
T ss_dssp EEEEEEEEECSCTTCSSCEEEEEEECTTSCCCCCTTCEEEEECSSBCTTSCBCCCEEEEBCSCTTTTTTSSSEEEEEEEC
T ss_pred EEEEEEEEEecCCCCCCcEEEEEEecCCCccccCCCCEEEEEcCCCcccCCCCCCcceecCCCCcccCCCCCEEEEEEEE
Confidence 467899999988 89999998653 57899999999999864 2 357899999998852 35789999997
Q ss_pred ------------CCCccHHHHHHHHhcccCCcccCcceeEEEeCCCCCCCC-CcCCCCeEEEEEeCCChhhHHHHHHHHH
Q 008159 240 ------------DGEWTSSLYQMIHAELDSDADQMRCIPVAIEGPYGPATM-DFLRYDSLLLVAGGIGITPFLSILQEIA 306 (575)
Q Consensus 240 ------------~G~~T~~L~~~~~~~~~~~~~~~~g~~v~v~GPyG~~~~-~~~~~~~vvlIagGiGITP~lsil~~l~ 306 (575)
.|.+|++|++ ++ +|+.+.|+||+|.+.. +....+++|||||||||||++||+++++
T Consensus 103 ~~y~~~~~~~~~~G~~S~~L~~-l~----------~Gd~v~v~gP~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~ 171 (304)
T 2bmw_A 103 LEYKHPESGETVYGVCSTYLTH-IE----------PGSEVKITGPVGKEMLLPDDPEANVIMLAGGTGITPMRTYLWRMF 171 (304)
T ss_dssp CEECSSSSSSCEECHHHHHHHT-CC----------TTCEEEEEEEECSSSCCCSCTTCEEEEEEEGGGHHHHHHHHHHHH
T ss_pred EEeeccccCcCCCcchhhHHhc-CC----------CCCEEEEEeccCCceeCCCCCCCCEEEEecCccHHHHHHHHHHHH
Confidence 4779999986 44 6999999999998753 3335689999999999999999999987
Q ss_pred Hhhcc---CCCCCCceEEEEEEeCCcchhhhHHhHHHHhhhccCCCceeEEEEEEeCCCCCcc----hhhhhhchhhhh-
Q 008159 307 SAQSN---RKYRFPSKVQLIYVIKSSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSSV----TVREVLNDLSLV- 378 (575)
Q Consensus 307 ~~~~~---~~~~~~~~v~li~~~r~~~~l~~~~~l~~~l~~~~~~~~~l~~~~~vT~~~~~~~----~~~g~~~~~~~~- 378 (575)
..... .......+++|+|++|+.+++.|.+++.++..+. ..++++++.+|+++..+. ..++.+.+....
T Consensus 172 ~~~~~~~~~~~~~~~~v~l~~g~r~~~d~~~~~el~~~~~~~---~~~~~~~~~~s~~~~~~~~~~~~v~~~l~~~~~~l 248 (304)
T 2bmw_A 172 KDAERAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQKY---PDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQL 248 (304)
T ss_dssp CHHHHHHCTTCCCCSCEEEEEEESSGGGCTTHHHHHHHHHHC---TTTEEEEEEETTTCBCTTSSBCCHHHHHHHTHHHH
T ss_pred HhhhhhcccccccCCCEEEEEEeCChHhcchHHHHHHHHHhC---CCcEEEEEEEcCCCCCCCCCcceehHHHHHhHHHH
Confidence 65311 0111236799999999999999999998764321 136889989998764332 234444432111
Q ss_pred hhhccCCCceeEEecCCchHHHHHHHHHHHH
Q 008159 379 RAVRFGTQSNYAVNGLESLIWMAALVGITSI 409 (575)
Q Consensus 379 ~~~~~~~~~~~~vcGp~~~~~~~~v~~~~~~ 409 (575)
......+...+|+|||.+ ||+++.+.+..
T Consensus 249 ~~~~~~~~~~vyvCGp~~--m~~~v~~~l~~ 277 (304)
T 2bmw_A 249 WQLIKNQKTHTYICGPPP--MEEGIDAALSA 277 (304)
T ss_dssp HHHHTSTTEEEEEEECTT--HHHHHHHHHHH
T ss_pred HHHhhcCCcEEEEECCHH--HHHHHHHHHHH
Confidence 000112346799999998 99999887765
No 23
>2b5o_A FNR, ferredoxin--NADP reductase; complex with FAD, oxidoreductase; HET: FAD; 2.50A {Synechococcus SP}
Probab=99.95 E-value=2.8e-27 Score=249.41 Aligned_cols=220 Identities=16% Similarity=0.218 Sum_probs=166.5
Q ss_pred ceeEEEEEEecC-----CeEEEEEecCC-CCcccCCeEEEEEeCCC---C-CCccccCccccCCCC---CCCcEEEEEEe
Q 008159 173 ETCILSARVFPS-----KAIELILPKHA-GLKFTPTSVIFMKIPSI---S-KFQWHSFSITSSSSV---DDQTMSLIVKC 239 (575)
Q Consensus 173 ~~~v~~~~~~~~-----~~~~l~~~~~~-~~~~~pGQ~v~l~~p~~---~-~~~~hpfSI~s~p~~---~~~~l~l~Ik~ 239 (575)
..+|++++.+++ ++.++++..+. .+.|+||||+.|.+|.. + ++++|||||+|+|.. +++.++|+||.
T Consensus 124 ~~~V~~~~~lt~~~~~~~v~~l~l~~~~~~~~~~pGQ~v~l~~~~~~~~g~~~~~R~ySIas~p~~~~~~~~~l~l~Vk~ 203 (402)
T 2b5o_A 124 LGKCIENYELVDEGGSGTVRHVTFDISEGDLRYLEGQSIGIIPPGEDKNGKPHKLRLYSIASTRHGDMEDNKTVSLCVRQ 203 (402)
T ss_dssp EEEEEEEEECSCTTCCSCEEEEEEECTTSCCCCCTTCEEEEECSSEETTTEECCCEEEEBCSCTTTTTTSSCEEEEEEEC
T ss_pred EEEEEEEEEcCCCCCCCcEEEEEEECCCCCCCcCCCCEEEEEecCCCcCCCccCceeeeccCCCccccCCCCEEEEEEEE
Confidence 467899999988 99999998765 48999999999998863 2 368999999999852 25789999997
Q ss_pred ------------CCCccHHHHHHHHhcccCCcccCcc-eeEEEeCCCCCCCC-CcCCCCeEEEEEeCCChhhHHHHHHHH
Q 008159 240 ------------DGEWTSSLYQMIHAELDSDADQMRC-IPVAIEGPYGPATM-DFLRYDSLLLVAGGIGITPFLSILQEI 305 (575)
Q Consensus 240 ------------~G~~T~~L~~~~~~~~~~~~~~~~g-~~v~v~GPyG~~~~-~~~~~~~vvlIagGiGITP~lsil~~l 305 (575)
.|.+|++|++ ++ +| +.+.|.||+|.+.. +.+..+++||||||+||||+++|++++
T Consensus 204 ~~y~~~~~~~~~~G~~S~~L~~-l~----------~G~d~v~v~gP~G~~~~l~~~~~~~vvlIAgGtGIaP~~s~l~~l 272 (402)
T 2b5o_A 204 LEYQDPESGETVYGVCSTYLCN-LP----------VGTDDVKITGPVGKEMLLPDDEDATVVMLATGTGIAPFRAFLWRM 272 (402)
T ss_dssp CEEECTTTCCEEECHHHHHHHT-CC----------TTCCCEEEEEEECSTTCCCSCTTCEEEEEEEGGGGHHHHHHHHHH
T ss_pred eeecccccCcCCCCchhHHHhh-CC----------CCCceEEEEcccCCcccCCccCCCCEEEEEcccCHHHHHHHHHHH
Confidence 5889999987 44 69 99999999998753 333568999999999999999999999
Q ss_pred HHhhccCCCCCCceEEEEEEeCCcchhhhHHhHHHHhhhccCCCceeEEEEEEeCCCCCcchhhhhhchhhhhh--hh--
Q 008159 306 ASAQSNRKYRFPSKVQLIYVIKSSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSSVTVREVLNDLSLVR--AV-- 381 (575)
Q Consensus 306 ~~~~~~~~~~~~~~v~li~~~r~~~~l~~~~~l~~~l~~~~~~~~~l~~~~~vT~~~~~~~~~~g~~~~~~~~~--~~-- 381 (575)
+..+.. ......+++|+|++|+.+++.|.++|.++..+. ..++++++.++++++.+.+.++.+++..... .+
T Consensus 273 ~~~~~~-~~~~~~~v~L~~g~R~~~d~~~~~eL~~l~~~~---~~~~~v~~~~S~~~~~~~g~~~~v~~~l~~~~~~l~~ 348 (402)
T 2b5o_A 273 FKEQHE-DYKFKGKAWLIFGVPYTANILYKDDFEKMAAEN---PDNFRLTYAISREQKTADGGKVYVQSRVSEYADELFE 348 (402)
T ss_dssp HTCCCS-SCCCCSEEEEEEEESSGGGCTTHHHHHHHHHHC---TTTEEEEEEETTTCBCTTSCBCCHHHHHHHTHHHHHH
T ss_pred HHhccc-cccccCCEEEEEecCCHHHhHHHHHHHHHHHhC---CCcEEEEEEECCCCcccCCCccchHHHHHHhHHHHHH
Confidence 864211 111247899999999999999999998764321 2378899999988654433333333322111 11
Q ss_pred cc-CCCceeEEecCCchHHHHHHHHHHHH
Q 008159 382 RF-GTQSNYAVNGLESLIWMAALVGITSI 409 (575)
Q Consensus 382 ~~-~~~~~~~vcGp~~~~~~~~v~~~~~~ 409 (575)
.. .+...+|+|||.+ ||+++.+.+..
T Consensus 349 ~l~~~~~~vyvCGP~~--M~~~v~~~L~~ 375 (402)
T 2b5o_A 349 MIQKPNTHVYMCGLKG--MQPPIDETFTA 375 (402)
T ss_dssp HHTSTTEEEEEEECGG--GHHHHHHHHHH
T ss_pred HhccCCcEEEEECCHH--HHHHHHHHHHH
Confidence 01 2356899999988 99999988877
No 24
>2rc5_A Ferredoxin-NADP reductase; FAD, oxidoreductase; HET: FAD; 2.43A {Leptospira interrogans} PDB: 2rc6_A*
Probab=99.94 E-value=1.4e-26 Score=236.60 Aligned_cols=217 Identities=17% Similarity=0.276 Sum_probs=162.2
Q ss_pred ceeEEEEEEecCC--------------eEEEEEecCCC-CcccCCeEEEEEeCCCC----C-------CccccCccccCC
Q 008159 173 ETCILSARVFPSK--------------AIELILPKHAG-LKFTPTSVIFMKIPSIS----K-------FQWHSFSITSSS 226 (575)
Q Consensus 173 ~~~v~~~~~~~~~--------------~~~l~~~~~~~-~~~~pGQ~v~l~~p~~~----~-------~~~hpfSI~s~p 226 (575)
..+|++++.++++ ++++++..+.. +.|+||||+.|.+|... + +++|||||+|+|
T Consensus 23 ~~~V~~~~~lt~~~~~~~~~~~e~~~~~~~l~l~~~~~~~~~~pGQ~v~l~~~~~~~~g~~~~~~~~~~~~R~ySi~s~p 102 (314)
T 2rc5_A 23 KAKVISNVLLTPETGTGKRPKKEGEALVHRIVLAIDHSAYPYVIGQSGGVIPPGEDPEKKAKGLADVGYTVRLYSIASPS 102 (314)
T ss_dssp EEEEEEEEECSCCTTSSSCCSSSCCCCEEEEEEECCTTTCCCCTTCEEEEECSSBCHHHHHTTCSCCBCCCEEEECCSCT
T ss_pred EEEEEEeEEcCCccccccccccccCceEEEEEEeCCCCcCcccCCCEEEEECCCCccccCccchhhcCCCceeeeccCCc
Confidence 4678999999887 89999987754 89999999999998642 2 478999999998
Q ss_pred CC---CCCcEEEEEEeC------------CCccHHHHHHHHhcccCCcccCcceeEEEeCCCCCCCCCc--CCCCeEEEE
Q 008159 227 SV---DDQTMSLIVKCD------------GEWTSSLYQMIHAELDSDADQMRCIPVAIEGPYGPATMDF--LRYDSLLLV 289 (575)
Q Consensus 227 ~~---~~~~l~l~Ik~~------------G~~T~~L~~~~~~~~~~~~~~~~g~~v~v~GPyG~~~~~~--~~~~~vvlI 289 (575)
.. +++.++|+||.. |.+|++|++ ++ +|+.+.|+||+|.+.... ...+++|||
T Consensus 103 ~~~~~~~~~l~l~vk~~~~~~~~g~~~~~G~~S~~L~~-l~----------~Gd~v~v~gP~G~~~~~~~~~~~~~~vlI 171 (314)
T 2rc5_A 103 YSFGMKEDNIEFIIKRDNIYDENGNIQFKGVCSNYMCD-LK----------PGDEVTMTGPSGKKFLLPNTDFSGDIMFL 171 (314)
T ss_dssp TCGGGCCCEEEEEEECCBCC--CCSCSSBCHHHHHHHT-CC----------TTCEEEEEEEECSSSCCCSSCBCSCEEEE
T ss_pred cccCCCCCEEEEEEEEEeecCCCCCcCCCcchHHHHhc-CC----------CcCEEEEEeccCCceeCCCCCCCCCEEEE
Confidence 51 357899999983 558999987 54 699999999999875432 357899999
Q ss_pred EeCCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeCCcchhhhHHhHHHHhhhccCCCceeEEEEEEeCCCCCc-chh
Q 008159 290 AGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIKSSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSS-VTV 368 (575)
Q Consensus 290 agGiGITP~lsil~~l~~~~~~~~~~~~~~v~li~~~r~~~~l~~~~~l~~~l~~~~~~~~~l~~~~~vT~~~~~~-~~~ 368 (575)
||||||||++||++++...+. .....+++|+|++|+.+++.|.+++.++..+ ..+++++..+|+++..+ .+.
T Consensus 172 agGtGIaP~~s~l~~l~~~~~---~~~~~~v~l~~g~r~~~d~~~~~el~~l~~~----~~~~~~~~~~s~~~~~~~~g~ 244 (314)
T 2rc5_A 172 ATGTGIAPFIGMSEELLEHKL---IKFTGNITLVYGAPYSDELVMMDYLKGLESK----HKNFKLITAISREEKNSFDGG 244 (314)
T ss_dssp EEGGGGHHHHHHHHHHHTTCS---SCBCSCEEEEEEESSGGGSCSHHHHHHHHHH----HSSEEEEEEETTTCBCTTTSS
T ss_pred ECCccHHHHHHHHHHHHHhcc---cCCCCcEEEEEEeCCHHHHhHHHHHHHHHHh----CCcEEEEEEECCCCCcccCCC
Confidence 999999999999999986421 0123679999999999999999999876432 13688988999875432 222
Q ss_pred hhhhchhhhhh--hh-c-cCCCceeEEe-cCCchHHHHHHHHHHHH
Q 008159 369 REVLNDLSLVR--AV-R-FGTQSNYAVN-GLESLIWMAALVGITSI 409 (575)
Q Consensus 369 ~g~~~~~~~~~--~~-~-~~~~~~~~vc-Gp~~~~~~~~v~~~~~~ 409 (575)
++.+++..... .+ . ..+...+|+| ||.+ ||+++.+.+..
T Consensus 245 ~~~v~~~l~~~~~~l~~~~~~~~~~yvCGGp~~--m~~~v~~~L~~ 288 (314)
T 2rc5_A 245 RMYISHRVREQAEAVKKILNGGGRFYICGGPKG--MEKGVIEEIQK 288 (314)
T ss_dssp BCCHHHHHHHTHHHHHHHHHHTCEEEEEESSTT--THHHHHHHHHH
T ss_pred ceehhHHHHHhHHHHHHHhhcCCeEEEeCCcHH--HHHHHHHHHHH
Confidence 33333322110 01 0 1112345999 9999 99999998877
No 25
>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} SCOP: b.43.4.1 c.25.1.4 PDB: 1ddi_A*
Probab=99.89 E-value=1.7e-23 Score=217.87 Aligned_cols=186 Identities=14% Similarity=0.124 Sum_probs=146.5
Q ss_pred cccCCeEEEEEeCCCCCCccccCccccCCCCCCCcEEEEEEeC----------CCccHHHHHHHHhcccCCcccCcceeE
Q 008159 198 KFTPTSVIFMKIPSISKFQWHSFSITSSSSVDDQTMSLIVKCD----------GEWTSSLYQMIHAELDSDADQMRCIPV 267 (575)
Q Consensus 198 ~~~pGQ~v~l~~p~~~~~~~hpfSI~s~p~~~~~~l~l~Ik~~----------G~~T~~L~~~~~~~~~~~~~~~~g~~v 267 (575)
.+.||||+.+..| .++|||||+|+|..+++.++|+||.. |..|++|.+.++ +|+.|
T Consensus 145 ~~~~Gq~v~l~~~----~~~R~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~G~~S~~L~~~l~----------~Gd~v 210 (374)
T 1ddg_A 145 QLDAEALINLLRP----LTPRLYSIASSQAEVENEVHVTVGVVRYDVEGRARAGGASSFLADRVE----------EEGEV 210 (374)
T ss_dssp CCCHHHHHHHSCB----CCCEEEEBCCCTTTSCSEEEEEEEECEEEETTEEEECHHHHHHHHSCC----------SSCEE
T ss_pred CCCHHHHHhhccC----CCCccceecCCCCCCCCEEEEEEEEEEeecCCCCCCCCchHHHHhcCC----------CCCEE
Confidence 7899999999765 38899999999864478999999975 889999988555 69999
Q ss_pred EEeC-CCCCCCCCcCCCCeEEEEEeCCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeCCc-chhhhHHhHHHHhhhc
Q 008159 268 AIEG-PYGPATMDFLRYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIKSS-QEICLLNSISPLLSNQ 345 (575)
Q Consensus 268 ~v~G-PyG~~~~~~~~~~~vvlIagGiGITP~lsil~~l~~~~~~~~~~~~~~v~li~~~r~~-~~l~~~~~l~~~l~~~ 345 (575)
.|.| |.|.|.++.+..++++|||||+|||||+||++++...+ ...++.|+|++|+. +++.|.+|+.++..+
T Consensus 211 ~v~~~~~g~F~lp~~~~~piimIa~GtGIAP~~s~l~~~~~~~------~~~~~~L~~G~R~~~~d~ly~~El~~~~~~- 283 (374)
T 1ddg_A 211 RVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADE------APGKNWLFFGNPHFTEDFLYQVEWQRYVKE- 283 (374)
T ss_dssp EEEEECCTTSCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHT------CCSCEEEEEEESCHHHHCTTHHHHHHHHHT-
T ss_pred EEEEeeCCCccCCCCCCCCEEEEECCccHHHHHHHHHHHHhcC------CCCCEEEEEEeCCchhhhhHHHHHHHHHHh-
Confidence 9998 66688766556789999999999999999999998753 24789999999998 789999999876432
Q ss_pred cCCCceeEEEEEEeCCCCCcchhhhhhchhhhhhhhccCCCceeEEec-CCchHHHHHHHHHHHH
Q 008159 346 QSKKWHLTLKVFVTQEEQSSVTVREVLNDLSLVRAVRFGTQSNYAVNG-LESLIWMAALVGITSI 409 (575)
Q Consensus 346 ~~~~~~l~~~~~vT~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vcG-p~~~~~~~~v~~~~~~ 409 (575)
...+++++.+|++++.....++++.+....-.....+...+|+|| |.+ |++++.+++..
T Consensus 284 ---~~~~~l~~a~Srd~~~k~yVq~~l~~~~~~l~~~l~~~~~vYvCG~p~~--M~~~V~~~L~~ 343 (374)
T 1ddg_A 284 ---GVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANR--MAKDVEQALLE 343 (374)
T ss_dssp ---TSCCEEEEEETTSSSSCCCHHHHHHHTHHHHHHHHHTTCEEEEEECTTT--HHHHHHHHHHH
T ss_pred ---CCCcEEEEEEecCCCCCccHHHHHHHhHHHHHHHHhCCcEEEEECCCHH--HHHHHHHHHHH
Confidence 234678888899876555666766643211111112457899999 999 99999988776
No 26
>3a1f_A Cytochrome B-245 heavy chain; GP91(PHOX), NADPH binding domain, oxidoreductase; 2.00A {Homo sapiens}
Probab=99.88 E-value=6.9e-23 Score=192.55 Aligned_cols=182 Identities=25% Similarity=0.510 Sum_probs=122.9
Q ss_pred EEEeCCCCCCCCCcCCCCeEEEEEeCCChhhHHHHHHHHHHhhccC-CCCCCceEEEEEEeCCcchhh-hHHhHHHHhhh
Q 008159 267 VAIEGPYGPATMDFLRYDSLLLVAGGIGITPFLSILQEIASAQSNR-KYRFPSKVQLIYVIKSSQEIC-LLNSISPLLSN 344 (575)
Q Consensus 267 v~v~GPyG~~~~~~~~~~~vvlIagGiGITP~lsil~~l~~~~~~~-~~~~~~~v~li~~~r~~~~l~-~~~~l~~~l~~ 344 (575)
|.|+||||.+..+..+++++|||||||||||++||+++++....++ .....++++|+|++|+.+++. +.+++.++...
T Consensus 1 v~v~GP~G~~~~~~~~~~~~vlIagG~GItP~~s~l~~l~~~~~~~~~~~~~~~v~l~~~~r~~~~~~w~~~~l~~l~~~ 80 (186)
T 3a1f_A 1 IAVDGPFGTASEDVFSYEVVMLVGAGIGVTPFASILKSVWYKYCNNATNLKLKKIYFYWLCRDTHAFEWFADLLQLLESQ 80 (186)
T ss_dssp CCTTSTTSHHHHHHTTSSEEEEEEEGGGHHHHHHHHHHHHHHHHHCTTCCCCCEEEEEEEESCTTTTHHHHHHHHHHHHH
T ss_pred CeEECCCCCCccChhhCCeEEEEecCccHHHHHHHHHHHHHHHhhcccCCCCcEEEEEEEECCcchHHHHHHHHHHHHHH
Confidence 3578999998765557899999999999999999999998753111 111358899999999999999 67777665332
Q ss_pred c--cCCCceeEEEEEEeCCCCCcchhhhhhchhhhhhhhccCCCceeEEecCCchHHHHHHHHHHHHHHHHHHHHhheEE
Q 008159 345 Q--QSKKWHLTLKVFVTQEEQSSVTVREVLNDLSLVRAVRFGTQSNYAVNGLESLIWMAALVGITSILFVIFLISLNHIF 422 (575)
Q Consensus 345 ~--~~~~~~l~~~~~vT~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vcGp~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 422 (575)
. .....++++++++|+++..... . . +++.
T Consensus 81 ~~~~~~~~~~~~~~~~t~~~~~~~~--------~------------~---------~~~~-------------------- 111 (186)
T 3a1f_A 81 MQERNNAGFLSYNIYLTGWDESQAN--------H------------F---------AVHH-------------------- 111 (186)
T ss_dssp HHHTTCTTSEEEEEEETTC-------------------------------------------------------------
T ss_pred HhhccCCCeEEEEEEEcCCCCCccc--------c------------e---------eecc--------------------
Confidence 1 0112378999999986431100 0 0 0000
Q ss_pred ecCCCcCccccccCCcccccccccCchhHHHHHHHHHHHHHhhhhhHHHHHHHHhhhhcCCCCCCcCCCcccccCCCcce
Q 008159 423 VPVEKKLPSEKLAAPSEKVVSKEKTPSWVADLIILSSFIIAITGSTLMAILLRWRRLKKQTPPVSLNQGKAVQVLGPIEE 502 (575)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sll~~l~~~g~~~~~~C~~G~C~~C~~~~~~g~v~~~~~~~~~~~e~~~~~v~ 502 (575)
+ .+ . ++ ..+..+
T Consensus 112 ---~--------------------~~---------------------~---------~~--------------~~g~~~- 123 (186)
T 3a1f_A 112 ---D--------------------EE---------------------K---------DV--------------ITGLKQ- 123 (186)
T ss_dssp ------------------------------------------------------------------------------C-
T ss_pred ---c--------------------cc---------------------c---------cc--------------CCCCcc-
Confidence 0 00 0 00 000001
Q ss_pred eeeeeecCCCChHHHHHHHHhhcCCceeEEEecCccchHHHHHHHhhhhhhhhhccCCCCCCceeeecccc
Q 008159 503 EHEINFGGRPNFEEIFSELEKETAGSDIGVLVCGPESMKESVAKTSQRKSQCFMMNANKDKPYFNFHSLNF 573 (575)
Q Consensus 503 ~~~v~fg~RPn~~~i~~~~~~~~~~~~vGV~~cGp~~l~~~v~~~c~~~~~~~~~~~~~~~~~f~fhs~~f 573 (575)
.+++ +|||++++++++.+.+++.++.||+|||++|.++|++++.+... ..+...+++||+|+|
T Consensus 124 --~~~~-gR~~~~~~~~~~~~~~~~~~~~v~~CGP~~m~~~v~~~l~~~g~-----~~~~~~~~~~~~E~F 186 (186)
T 3a1f_A 124 --KTLY-GRPNWDNEFKTIASQHPNTRIGVFLCGPEALAETLSKQSISNSE-----SGPRGVHFIFNKENF 186 (186)
T ss_dssp --CEEE-SCCCHHHHHHHHHHHSTTCEEEEEEESCHHHHHHHHHHHHHTCC-----CSTTCCEEEEECCCC
T ss_pred --cccc-CCCCHHHHHHHHHHhCCCCcEEEEEeCCHHHHHHHHHHHHHhhc-----cCCCCCEEEEEeccC
Confidence 3566 79999999998877766678999999999999999999998441 012456799999998
No 27
>2gpj_A Siderophore-interacting protein; structural genomics, joint for structural genomics, JCSG; HET: FAD; 2.20A {Shewanella putrefaciens}
Probab=99.87 E-value=2.2e-22 Score=198.85 Aligned_cols=196 Identities=13% Similarity=0.096 Sum_probs=142.0
Q ss_pred CceeEEEEEEecCCeEEEEEecCC--CC-cccCCeEEEEEeCC-CCCCccccCccccCCCCCCCcEEEEEEeC---CCcc
Q 008159 172 PETCILSARVFPSKAIELILPKHA--GL-KFTPTSVIFMKIPS-ISKFQWHSFSITSSSSVDDQTMSLIVKCD---GEWT 244 (575)
Q Consensus 172 ~~~~v~~~~~~~~~~~~l~~~~~~--~~-~~~pGQ~v~l~~p~-~~~~~~hpfSI~s~p~~~~~~l~l~Ik~~---G~~T 244 (575)
...+|++++.+++++.++++..+. .+ .|+|||||.|.+|. .++..+|||||++.+. +.++|.++.. |..|
T Consensus 9 ~~~~V~~~~~~t~~~~~l~l~~~~~~~~~~~~pGQ~v~l~~~~~~~~~~~R~YSi~~~~~---~~~~i~~~~~~~~G~~S 85 (252)
T 2gpj_A 9 RELEVIRSTYITPHMLRITLGGAGLAGFPADQESAYIKLLFPQAGERPLMRTYTIRQQRD---DEIDVDFVLHDTDGPAS 85 (252)
T ss_dssp EEEEEEEEEEEETTEEEEEEESGGGTTCCSCCTTCEEEEEECCTTSCCEEEEEECCEEET---TEEEEEEECCSSCCHHH
T ss_pred EEEEEEEEEEcCCCEEEEEEEcCChhhcCCCCCCCeEEEEcccCCCCCCCCceeeeccCC---CEEEEEEEEeCCCCcHH
Confidence 356789999999999999998764 23 58999999999985 3556889999999763 5788887763 7899
Q ss_pred HHHHHHHHhcccCCcccCcceeEEEeCCCCCCCCCcCCCCeEEEEEeCCChhhHHHHHHHHHHhhccCCCCCCceEEEEE
Q 008159 245 SSLYQMIHAELDSDADQMRCIPVAIEGPYGPATMDFLRYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIY 324 (575)
Q Consensus 245 ~~L~~~~~~~~~~~~~~~~g~~v~v~GPyG~~~~~~~~~~~vvlIagGiGITP~lsil~~l~~~~~~~~~~~~~~v~li~ 324 (575)
++|+ .++ +|+.+.|.||.|.|.++. ..++++||||||||||+++|++++.. ..++++++
T Consensus 86 ~~l~-~l~----------~Gd~l~v~gP~G~f~l~~-~~~~~lliagGtGitPi~s~l~~l~~---------~~~~~~~~ 144 (252)
T 2gpj_A 86 SWAK-TAQ----------VGELIQIGGPGLKKLINF-EADWFLLAGDMTALPAISVNLAKLPN---------NAVGYAVI 144 (252)
T ss_dssp HHHH-HCC----------TTCEEEEEEEECCCCCCS-SSSEEEEEEEGGGHHHHHHHHHHSCT---------TCEEEEEE
T ss_pred HHHh-hCC----------CCCEEEEecCCCCCcCCC-CCceEEEEcchhhHHHHHHHHHhCCC---------CCcEEEEE
Confidence 9996 455 799999999999987653 35789999999999999999998843 25678888
Q ss_pred EeCCcchhhhHHhHHHHhhhccCCCceeEEEEEEeCCCCCcchhhhhhchhhhhhhhccCCCceeEEecCCchHHHHHHH
Q 008159 325 VIKSSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEEQSSVTVREVLNDLSLVRAVRFGTQSNYAVNGLESLIWMAALV 404 (575)
Q Consensus 325 ~~r~~~~l~~~~~l~~~l~~~~~~~~~l~~~~~vT~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vcGp~~~~~~~~v~ 404 (575)
.+++.+++..++ ...+++++...+.++. ..+ ..+.+... +.........+|+|||.+ ||++++
T Consensus 145 ~~~~~~d~~~l~-----------~~~~~~v~~~~~~~~~-~~g--~~~~~~l~-~~~~~~~~~~vy~CGP~~--m~~av~ 207 (252)
T 2gpj_A 145 EVLSEADIQPLV-----------HPEHVELHWVINPEAD-PEG--RPLVERIA-QLPWLAGEPAVWIACEFN--SMRALR 207 (252)
T ss_dssp EESSGGGCCCCC-----------CCTEEEEEEEECSSCC-TTC--HHHHHHHT-TSCCCSSCEEEEEEEEHH--HHHHHH
T ss_pred EECCHHHhhccc-----------CCCCcEEEEEeCCCCC-ccc--HHHHHHHH-hccCCCCCcEEEEEcCHH--HHHHHH
Confidence 899987754221 1245666655443322 101 11222111 110112345789999999 999999
Q ss_pred HHHH
Q 008159 405 GITS 408 (575)
Q Consensus 405 ~~~~ 408 (575)
+.+.
T Consensus 208 ~~l~ 211 (252)
T 2gpj_A 208 RHFK 211 (252)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8876
No 28
>4dql_A Bifunctional P-450/NADPH-P450 reductase; rossmann fold, redox, FAD and NADP+ binding, oxidoreductase; HET: FAD NAP 1PE PG4; 2.15A {Bacillus megaterium} PDB: 4dqk_A*
Probab=99.83 E-value=4.3e-20 Score=193.13 Aligned_cols=188 Identities=18% Similarity=0.220 Sum_probs=134.6
Q ss_pred cccCCeEEEEEeCCCCCCccccCccccCCCCCCCcEEEEEEeC------------CCccHHHHHHHHhcccCCcccCcce
Q 008159 198 KFTPTSVIFMKIPSISKFQWHSFSITSSSSVDDQTMSLIVKCD------------GEWTSSLYQMIHAELDSDADQMRCI 265 (575)
Q Consensus 198 ~~~pGQ~v~l~~p~~~~~~~hpfSI~s~p~~~~~~l~l~Ik~~------------G~~T~~L~~~~~~~~~~~~~~~~g~ 265 (575)
+..++|++.+ +|. +++|||||+|+|..+++.++++|+.. |..|++|.+ ++ +|+
T Consensus 156 ~~p~~~~l~~-lp~---l~~R~YSIsSsp~~~~~~i~l~v~vv~~~~~~g~~~~~G~~S~~L~~-l~----------~Gd 220 (393)
T 4dql_A 156 EMKFSEFIAL-LPS---IRPRYYSISSSPRVDEKQASITVSVVSGEAWSGYGEYKGIASNYLAE-LQ----------EGD 220 (393)
T ss_dssp CCCHHHHHHT-SCB---CCCEEEECCSCTTTCTTEEEEEEECCEEECTTSSSEEECHHHHHHHH-CC----------TTC
T ss_pred CCCHHHHHHh-CCC---CcceeeeccccccccCceEEEEEEEEecccCCCCcccCCccchhHHh-CC----------CcC
Confidence 4456776655 343 48899999999975468899999874 778999986 33 588
Q ss_pred eEE--EeCCCCCCCCCcCCCCeEEEEEeCCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeCC-cchhhhHHhHHHHh
Q 008159 266 PVA--IEGPYGPATMDFLRYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIKS-SQEICLLNSISPLL 342 (575)
Q Consensus 266 ~v~--v~GPyG~~~~~~~~~~~vvlIagGiGITP~lsil~~l~~~~~~~~~~~~~~v~li~~~r~-~~~l~~~~~l~~~l 342 (575)
.+. |.||+|.|.++.+...+++|||||+|||||++++++.......+ ....++.|+|++|+ .+++.|.+++.++.
T Consensus 221 ~v~v~v~~P~g~F~lp~~~~~piImIg~GtGIAPf~s~l~~r~~~~~~g--~~~~~v~L~~G~R~~~~d~ly~~el~~~~ 298 (393)
T 4dql_A 221 TITCFISTPQSEFTLPKDPETPLIMVGPGTGVAPFRGFVQARKQLKEQG--QSLGEAHLYFGCRSPHEDYLYQEELENAQ 298 (393)
T ss_dssp EEEEEEECCSSCCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHTT--CCCCCEEEEEEESCTTTCCTTHHHHHHHH
T ss_pred EEEEEEEcCCCCcccCccCCCCeEEEccCceechHHHHHHHHHHHHhcC--CCCCCEEEEEEECCcchhhHHHHHHHHHH
Confidence 776 88999999876656779999999999999999999854321111 12367999999999 58999999998764
Q ss_pred hhccCCCceeEEEEEEeCCCC-CcchhhhhhchhhhhhhhccCCCceeEEecCCchHHH-HHHHHHHHH
Q 008159 343 SNQQSKKWHLTLKVFVTQEEQ-SSVTVREVLNDLSLVRAVRFGTQSNYAVNGLESLIWM-AALVGITSI 409 (575)
Q Consensus 343 ~~~~~~~~~l~~~~~vT~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~vcGp~~~~~~-~~v~~~~~~ 409 (575)
. ..++++++.+|++++ .....++.+.+....-.....+...+|+|||.+ +| +++..++..
T Consensus 299 ~-----~~~l~l~~a~Sr~~~~~k~yVq~~l~~~~~~l~~~l~~~~~vYvCGp~~--~M~~~V~~~L~~ 360 (393)
T 4dql_A 299 S-----EGIITLHTAFSRMPNQPKTYVQHVMEQDGKKLIELLDQGAHFYICGDGS--QMAPAVEATLMK 360 (393)
T ss_dssp H-----TTSCEEEEEESSCTTSCCCCHHHHHHHTHHHHHHHHHTTCEEEEEEETT--THHHHHHHHHHH
T ss_pred h-----CCCeEEEEEEeCCCCCCCcchhhHHHhCHHHHHHHHhCCcEEEEECCch--hhHHHHHHHHHH
Confidence 2 246788889998543 334445555432211111123467899999975 44 578777666
No 29
>2qtl_A MSR;, methionine synthase reductase; alpha-beta-alpha structural motif, flattened antiparallel BE barrel, flexible hinge region, connecting domain; HET: FAD; 1.90A {Homo sapiens} PDB: 2qtz_A*
Probab=99.82 E-value=4.8e-20 Score=199.73 Aligned_cols=200 Identities=15% Similarity=0.162 Sum_probs=136.3
Q ss_pred CCeEEEEEeCCCCCCccccCccccCCCCCCCcEEEEEEeC-------------CCccHHHHHHHHhcccCCcccCcce--
Q 008159 201 PTSVIFMKIPSISKFQWHSFSITSSSSVDDQTMSLIVKCD-------------GEWTSSLYQMIHAELDSDADQMRCI-- 265 (575)
Q Consensus 201 pGQ~v~l~~p~~~~~~~hpfSI~s~p~~~~~~l~l~Ik~~-------------G~~T~~L~~~~~~~~~~~~~~~~g~-- 265 (575)
|+|++...+|. .+.|+|||+|+|..+++.++|+||.. |..|++|.+.+.....+.....+|+
T Consensus 278 p~~~ll~~lp~---l~~R~YSIsSsp~~~~~~i~ltV~~v~~~~~~~~~~~~~G~~S~~L~~l~~~~~~~~~~~~~Gd~~ 354 (539)
T 2qtl_A 278 PLSLLLEHLPK---LQPRPYSCASSSLFHPGKLHFVFNIVEFLSTATTEVLRKGVCTGWLALLVASVLQPNIHASHEDSG 354 (539)
T ss_dssp CHHHHHHHSCB---CCCEEEECCSCTTTSTTEEEEEEECCEEECSCSSCSEEECHHHHHHHHHTTTTC------------
T ss_pred CHHHHHHhCcC---CcceEEeecCCccCCCCEEEEEEEEEEeccCCCCCcCCCCchhhHHHHhhhhhccccccCCCCCcc
Confidence 45666655665 48899999999864468999999975 7789999988521111000112577
Q ss_pred -----eEEEeCCCC-CCCCCcCCCCeEEEEEeCCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeCCc-chhhhHHhH
Q 008159 266 -----PVAIEGPYG-PATMDFLRYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIKSS-QEICLLNSI 338 (575)
Q Consensus 266 -----~v~v~GPyG-~~~~~~~~~~~vvlIagGiGITP~lsil~~l~~~~~~~~~~~~~~v~li~~~r~~-~~l~~~~~l 338 (575)
.|.|.||+| .|.++.+...+++|||||+|||||++|+++.......+......+++|+|++|+. +|+.|.+++
T Consensus 355 ~~~~~~V~v~~p~g~~F~Lp~~~~~piImIg~GTGIAPfrsflq~r~~~~~~~~~~~~~~v~LffG~R~~~~D~ly~dEL 434 (539)
T 2qtl_A 355 KALAPKISIFPRTTNSFHLPDDPSIPIIMVGPGTGIAPFIGFLQHREKLQEQHPDGNFGAMWLFFGCRHKDRDYLFRKEL 434 (539)
T ss_dssp --CCCEEEEEECSCCCCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHHCTTCCCCCEEEEEEESCTTTCCTTHHHH
T ss_pred ccCceEEEEEeeeCCCccCCccCCCCEEEEEcCccHHHHHHHHHHHHHHHhccccCCCCCEEEEEEECCcchhhHHHHHH
Confidence 999999997 7766544568999999999999999999996543211111124789999999999 799999999
Q ss_pred HHHhhhccCCCceeEEEEEEeCCCCC--cchhhhhhchhhhhhhhc----c-CCCceeEEecCC-chHHHHHHHHHHHH
Q 008159 339 SPLLSNQQSKKWHLTLKVFVTQEEQS--SVTVREVLNDLSLVRAVR----F-GTQSNYAVNGLE-SLIWMAALVGITSI 409 (575)
Q Consensus 339 ~~~l~~~~~~~~~l~~~~~vT~~~~~--~~~~~g~~~~~~~~~~~~----~-~~~~~~~vcGp~-~~~~~~~v~~~~~~ 409 (575)
.++.. ....+++++.+||++.. +.+.++++++........ . .+...+|+|||. + |++++.+++..
T Consensus 435 ~~~~~----~g~~~~l~~afSRd~~~~~~~g~k~yVqd~l~e~~~~l~~~l~~~~a~vYVCGp~~~--M~~~V~~~L~~ 507 (539)
T 2qtl_A 435 RHFLK----HGILTHLKVSFSRDAPVGEEEAPAKYVQDNIQLHGQQVARILLQENGHIYVCGDAKN--MAKDVHDALVQ 507 (539)
T ss_dssp HHHHH----TTSSCEEEEEESSSCC------CCCSHHHHHHHTHHHHHHHHHHSCCEEEEEESCHH--HHHHHHHHHHH
T ss_pred HHHHH----hCCCcEEEEEEccCCCccccCCCccchhHHHHHhHHHHHHhhccCCcEEEEECCCHH--HHHHHHHHHHH
Confidence 88643 22456888889998652 122345555433221111 1 235789999998 8 99999988777
No 30
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidore; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4
Probab=99.80 E-value=3.1e-19 Score=189.42 Aligned_cols=177 Identities=19% Similarity=0.113 Sum_probs=129.9
Q ss_pred CccccCccccCCCCCCCcEEEEEEeC-------------CCccHHHHHHHHhcccCCcccCcceeEEEeC-CCCCCCCCc
Q 008159 215 FQWHSFSITSSSSVDDQTMSLIVKCD-------------GEWTSSLYQMIHAELDSDADQMRCIPVAIEG-PYGPATMDF 280 (575)
Q Consensus 215 ~~~hpfSI~s~p~~~~~~l~l~Ik~~-------------G~~T~~L~~~~~~~~~~~~~~~~g~~v~v~G-PyG~~~~~~ 280 (575)
.+.|||||+|+|...++.++++|+.. |..|++|.+ ++ +|+.|.|.| |.|.|.++.
T Consensus 208 l~~R~YSIsSsp~~~~~~i~l~v~vv~~~~~~g~~~~~~G~~S~~L~~-l~----------~Gd~v~v~~~~~g~F~lp~ 276 (435)
T 1f20_A 208 LQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNR-IQ----------ADDVVPCFVRGAPSFHLPR 276 (435)
T ss_dssp CCCEEEECCSCTTTSTTEEEEEEECCEEECGGGTSCEEECHHHHHHTT-CC----------TTCEEEEEEECCTTSSCCS
T ss_pred CCCccccccCCcccCCCeEEEEEEEEEEecCCCCCcccCCccchhHhh-CC----------CCCEEEEEEecCCCccCCC
Confidence 48899999999864367899999853 778999864 33 699999999 677887665
Q ss_pred CCCCeEEEEEeCCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeCCcc-hhhhHHhHHHHhhhccCCCceeEEEEEEe
Q 008159 281 LRYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIKSSQ-EICLLNSISPLLSNQQSKKWHLTLKVFVT 359 (575)
Q Consensus 281 ~~~~~vvlIagGiGITP~lsil~~l~~~~~~~~~~~~~~v~li~~~r~~~-~l~~~~~l~~~l~~~~~~~~~l~~~~~vT 359 (575)
+..++++|||||+|||||+||++++....... .....+++|+|++|+.+ ++.|.+|+.++.. ....+++++.+|
T Consensus 277 ~~~~piilIagGtGIAP~~s~l~~~~~~~~~~-~~~~~~~~L~~G~R~~~~d~ly~~El~~~~~----~~~~~~l~~a~S 351 (435)
T 1f20_A 277 NPQVPCILVGPGTGIAPFRSFWQQRQFDIQHK-GMNPCPMVLVFGCRQSKIDHIYREETLQAKN----KGVFRELYTAYS 351 (435)
T ss_dssp CTTSCEEEECCGGGGHHHHHHHHHHHHHHHHH-CCCCCCEEEEEEESCTTTSCTTHHHHHHHHH----TTSEEEEEEEES
T ss_pred CCCCCEEEEECCcCcHHHHHHHHHHHHhhhhc-cCCCCCEEEEEeecccccchhHHHHHHHHHH----cCCccEEEEEEC
Confidence 55689999999999999999999987642100 11247899999999997 6889999887643 234567888899
Q ss_pred CCCCC-cchhhhhhchhhhhhhh-cc-CCCceeEEecCCchHHHHHHHHHHHH
Q 008159 360 QEEQS-SVTVREVLNDLSLVRAV-RF-GTQSNYAVNGLESLIWMAALVGITSI 409 (575)
Q Consensus 360 ~~~~~-~~~~~g~~~~~~~~~~~-~~-~~~~~~~vcGp~~~~~~~~v~~~~~~ 409 (575)
++++. ....++++.+....... .. .+...+|+|||.+ |++++.+++..
T Consensus 352 r~~~~~k~yVq~~l~~~l~~~~~~~l~~~~~~vYvCGp~~--M~~~V~~~L~~ 402 (435)
T 1f20_A 352 REPDRPKKYVQDVLQEQLAESVYRALKEQGGHIYVCGDVT--MAADVLKAIQR 402 (435)
T ss_dssp SCTTSCCCCHHHHHHHHSHHHHHHHHHTSCCEEEEEECHH--HHHHHHHHHHH
T ss_pred CCCCCCCcchhhHHHhhhHHHHHHHHhcCCcEEEEeCChh--HHHHHHHHHHH
Confidence 98653 23445554432111111 11 2457899999997 99999988877
No 31
>2bpo_A CPR, P450R, NADPH-cytochrom P450 reductase; NADPH-cytochrome P450 reductase, diflavin reductase, FAD, FMN-binding, electron transfer; HET: FAD FMN NAP; 2.9A {Saccharomyces cerevisiae} PDB: 2bn4_A* 2bf4_A*
Probab=99.79 E-value=9.5e-20 Score=203.47 Aligned_cols=203 Identities=15% Similarity=0.137 Sum_probs=139.7
Q ss_pred ccCCeEEEEEeCCCCCCccccCccccCCCCCCCcEEEEEEe--------------CCCccHHHHHHHHhccc-CCcccCc
Q 008159 199 FTPTSVIFMKIPSISKFQWHSFSITSSSSVDDQTMSLIVKC--------------DGEWTSSLYQMIHAELD-SDADQMR 263 (575)
Q Consensus 199 ~~pGQ~v~l~~p~~~~~~~hpfSI~s~p~~~~~~l~l~Ik~--------------~G~~T~~L~~~~~~~~~-~~~~~~~ 263 (575)
-.|+||+...+|. .++|||||+|+|..+++.++|+|+. .|..|++|.+....... .......
T Consensus 414 ~~p~~~l~~~lp~---l~~R~YSIsSsp~~~~~~i~ltv~Vv~~~~~~~~~~~~~~G~~S~~L~~l~~g~~~~~~~~~~~ 490 (682)
T 2bpo_A 414 TVPMQFLVESVPQ---MTPRYYSISSSSLSEKQTVHVTSIVENFPNPELPDAPPVVGVTTNLLRNIQLAQNNVNIAETNL 490 (682)
T ss_dssp TSCHHHHHHHSCB---CCCEEEEBCSCTTTCTTEEEEEEECCEECCSSCTTSCCEECHHHHHHHHHHHHHTTCCTTTSCC
T ss_pred CCCHHHHHHhCcc---cccccccccCCcccCCCeEEEEEEEEEEecCcccCCcccCccccHHHHhccccccccccccccc
Confidence 3578888877775 4889999999987445789998753 48889999984321000 0001123
Q ss_pred ceeEEEeCCCCCC--------------CCCcCCCCeEEEEEeCCChhhHHHHHHHHHHhhcc----CCCCCCceEEEEEE
Q 008159 264 CIPVAIEGPYGPA--------------TMDFLRYDSLLLVAGGIGITPFLSILQEIASAQSN----RKYRFPSKVQLIYV 325 (575)
Q Consensus 264 g~~v~v~GPyG~~--------------~~~~~~~~~vvlIagGiGITP~lsil~~l~~~~~~----~~~~~~~~v~li~~ 325 (575)
|+.+.|+||+|.| .++.+...+++|||||+|||||+++++++...+.. .......++.|+|+
T Consensus 491 G~~v~i~GP~G~f~~~~v~v~vr~~~F~Lp~~~~~piImIg~GTGIAPfrs~lq~r~~~~~~~~~~~~g~~~~~~~L~fG 570 (682)
T 2bpo_A 491 PVHYDLNGPRKLFANYKLPVHVRRSNFRLPSNPSTPVIMIGPGTGVAPFRGFIRERVAFLESQKKGGNNVSLGKHILFYG 570 (682)
T ss_dssp CCCCCSSCGGGTTTTTEECEEEECCSCCCCSSTTSCEEEEEEGGGGHHHHHHHHHHHHHHHTCC----CCCCCCEEEEEE
T ss_pred ccceeeccCcCcccCceEEEEEecCcccCCCCCCCCEEEEecCcChHHHHHHHHHHHHhhcccccccccCCcCCEEEEEe
Confidence 8899999999996 22222357899999999999999999998865320 01112468999999
Q ss_pred eCCcchhhhHHhHHHHhhhccCCCceeEEEEEEeCCC-CCcchhhhhhchhhhhhhhccCCCceeEEecC-CchHHHHHH
Q 008159 326 IKSSQEICLLNSISPLLSNQQSKKWHLTLKVFVTQEE-QSSVTVREVLNDLSLVRAVRFGTQSNYAVNGL-ESLIWMAAL 403 (575)
Q Consensus 326 ~r~~~~l~~~~~l~~~l~~~~~~~~~l~~~~~vT~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~vcGp-~~~~~~~~v 403 (575)
+|+.+|+.|.+|+.++..+. ..++++++.+||++ +.....+..+.+....-.....+...+|+||| .+ |++++
T Consensus 571 ~R~~~D~ly~dEl~~~~~~~---g~~~~l~~afSr~d~~~k~yVqd~l~e~~~~l~~~l~~~~~vYvCGpa~~--M~~~V 645 (682)
T 2bpo_A 571 SRNTDDFLYQDEWPEYAKKL---DGSFEMVVAHSRLPNTKKVYVQDKLKDYEDQVFEMINNGAFIYVCGDAKG--MAKGV 645 (682)
T ss_dssp ESSSSSCTTTTTHHHHHHHH---GGGEEEEEEESCCTTSCCCCHHHHHHHTHHHHHHHHTTTCEEEEEECSTT--HHHHH
T ss_pred cCChhhhhhHHHHHHHHHhc---CCceEEEEEECCCCCCCCcchHHHHHhhHHHHHHHHhCCcEEEEeCCchH--hHHHH
Confidence 99999999999998763221 24678888999954 33334444444322110011234578999999 68 99999
Q ss_pred HHHHHH
Q 008159 404 VGITSI 409 (575)
Q Consensus 404 ~~~~~~ 409 (575)
.+++..
T Consensus 646 ~~~L~~ 651 (682)
T 2bpo_A 646 STALVG 651 (682)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988777
No 32
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4
Probab=99.78 E-value=2.7e-19 Score=199.86 Aligned_cols=188 Identities=19% Similarity=0.140 Sum_probs=136.9
Q ss_pred CCeEEEEEeCCCCCCccccCccccCCCCCCCcEEEEEEeC-------------CCccHHHHHHHHhcccCCcccCcceeE
Q 008159 201 PTSVIFMKIPSISKFQWHSFSITSSSSVDDQTMSLIVKCD-------------GEWTSSLYQMIHAELDSDADQMRCIPV 267 (575)
Q Consensus 201 pGQ~v~l~~p~~~~~~~hpfSI~s~p~~~~~~l~l~Ik~~-------------G~~T~~L~~~~~~~~~~~~~~~~g~~v 267 (575)
|+||+...+|. .++|+|||+|+|...++.++++|+.. |..|++|++ ++ +|+.|
T Consensus 418 p~~~l~~~lp~---l~~R~YSIsSsp~~~~~~i~l~V~vv~~~~~~g~~~~~~G~~S~~L~~-l~----------~Gd~v 483 (688)
T 1tll_A 418 PATLLLTQLSL---LQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNR-IQ----------ADDVV 483 (688)
T ss_dssp CHHHHHHHSCB---CCCEEEEBCSCTTTSTTEEEEEEECCEEETGGGTSCEEECHHHHHHTT-CC----------TTSEE
T ss_pred CHHHHHHhCcc---cceeEEeecCCcccCCCeEEEEEEEEEEecCCCCCCcCCCchhHHHHh-CC----------CCCEE
Confidence 56666555554 48899999999864367899999853 778999865 33 69999
Q ss_pred EEeC-CCCCCCCCcCCCCeEEEEEeCCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeCCcc-hhhhHHhHHHHhhhc
Q 008159 268 AIEG-PYGPATMDFLRYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIKSSQ-EICLLNSISPLLSNQ 345 (575)
Q Consensus 268 ~v~G-PyG~~~~~~~~~~~vvlIagGiGITP~lsil~~l~~~~~~~~~~~~~~v~li~~~r~~~-~l~~~~~l~~~l~~~ 345 (575)
.|.| |.|.|.++.+...++||||||||||||++|++++...... ......+++|+|++|+.+ |+.|.+++.++..
T Consensus 484 ~v~~~p~g~F~lp~~~~~piIlIagGtGIAP~~s~l~~~~~~~~~-~~~~~~~v~L~~G~R~~~~D~ly~dEL~~~~~-- 560 (688)
T 1tll_A 484 PCFVRGAPSFHLPRNPQVPCILVGPGTGIAPFRSFWQQRQFDIQH-KGMNPCPMVLVFGCRQSKIDHIYREETLQAKN-- 560 (688)
T ss_dssp EEEEECCGGGSCCSCTTSCEEEEEEGGGGTTHHHHHHHHHHHHHH-SCCCCCCEEEEEEESCTTTTCTTHHHHHHHHH--
T ss_pred EEEeccCCCcccCcCCCCCEEEEEcCcchHHHHHHHHHHHHhhhh-ccCCCCCEEEEEEeccchhhhhHHHHHHHHHH--
Confidence 9999 6778876655568999999999999999999998764211 111347899999999997 7889999987643
Q ss_pred cCCCceeEEEEEEeCCCCC-cchhhhhhchhhhhhhh-cc-CCCceeEEecCCchHHHHHHHHHHHH
Q 008159 346 QSKKWHLTLKVFVTQEEQS-SVTVREVLNDLSLVRAV-RF-GTQSNYAVNGLESLIWMAALVGITSI 409 (575)
Q Consensus 346 ~~~~~~l~~~~~vT~~~~~-~~~~~g~~~~~~~~~~~-~~-~~~~~~~vcGp~~~~~~~~v~~~~~~ 409 (575)
....+++++.+|++++. ....++++.+....+.. .. .+...+|+|||.+ |++++.+.+..
T Consensus 561 --~~~~~~l~~a~Sr~~~~~k~yVq~~l~~~l~~~l~~~l~~~~~~vYvCGp~~--M~~~V~~~L~~ 623 (688)
T 1tll_A 561 --KGVFRELYTAYSREPDRPKKYVQDVLQEQLAESVYRALKEQGGHIYVCGDVT--MAADVLKAIQR 623 (688)
T ss_dssp --TTSEEEEEEEESSCTTSCCCCHHHHHHHSSHHHHHHHHHTSCCEEEEEEEHH--HHHHHHHHHHH
T ss_pred --cCCceEEEEEECCCCCCCccchhhhhHHhHHHHHHHhhccCCcEEEEeCCHH--HHHHHHHHHHH
Confidence 23457888889998653 33455555443111111 11 2457899999997 99999988776
No 33
>3qfs_A CPR, P450R, NADPH--cytochrome P450 reductase; flavoprotein, FAD, oxidoreductase; HET: FAD NAP; 1.40A {Homo sapiens} PDB: 3qft_A*
Probab=99.77 E-value=1.5e-18 Score=184.12 Aligned_cols=179 Identities=17% Similarity=0.145 Sum_probs=129.8
Q ss_pred CCCccccCccccCCCCCCCcEEEEEEe-----------CCCccHHHHHHHHhcccCCcccCcce-----eEEEeCCCCCC
Q 008159 213 SKFQWHSFSITSSSSVDDQTMSLIVKC-----------DGEWTSSLYQMIHAELDSDADQMRCI-----PVAIEGPYGPA 276 (575)
Q Consensus 213 ~~~~~hpfSI~s~p~~~~~~l~l~Ik~-----------~G~~T~~L~~~~~~~~~~~~~~~~g~-----~v~v~GPyG~~ 276 (575)
.+++.|+|||+|+|..+++.++|+|+. .|..|++|.+... .|+ .|.|.+|+|.|
T Consensus 230 p~l~pR~YSIsSsp~~~~~~i~ltV~vv~~~~~~~r~~~G~~S~~L~~l~~----------gg~~~~~~~v~v~~p~g~F 299 (458)
T 3qfs_A 230 PRLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKEP----------VGENGGRALVPMFVRKSQF 299 (458)
T ss_dssp CBCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSCEEECHHHHHHHTCCS----------SCSSCCCCEEEEEEECCSC
T ss_pred CCCcceeEeeccCcccCCCEEEEEEEEEEecCCCCCCCCCchhHHHHhhcc----------CCccCCceEEEEEecCCCc
Confidence 346889999999987446889998864 4888999987643 222 69999999998
Q ss_pred CCCcCCCCeEEEEEeCCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeCCc-chhhhHHhHHHHhhhccCCCceeEEE
Q 008159 277 TMDFLRYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIKSS-QEICLLNSISPLLSNQQSKKWHLTLK 355 (575)
Q Consensus 277 ~~~~~~~~~vvlIagGiGITP~lsil~~l~~~~~~~~~~~~~~v~li~~~r~~-~~l~~~~~l~~~l~~~~~~~~~l~~~ 355 (575)
.++.+...+++|||||+|||||++|+++.......+ ....++.|+|++|+. +|+.|.+++.++..+ ....+++
T Consensus 300 ~lp~~~~~piImIggGTGIAPfrs~lq~r~~l~~~g--~~~~~~~Lf~G~R~~~~D~ly~dEl~~l~~~----g~l~~l~ 373 (458)
T 3qfs_A 300 RLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQG--KEVGETLLYYGCRRSDEDYLYREELAQFHRD----GALTQLN 373 (458)
T ss_dssp CCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHHT--CCCCCEEEEEEESCTTTSCTTHHHHHHHHHH----TSSSEEE
T ss_pred ccCCCCCCceEEEcCCcchhhHHHHHHHHHHHHhcC--CCCCCEEEEEEeCCchHhhhHHHHHHHHHHc----CCCCEEE
Confidence 876555789999999999999999999864321111 123679999999996 799999999876432 1223778
Q ss_pred EEEeCCCCCcchhhhhhchhhhhhhhccCCCceeEEecCC-chHHHHHHHHHHHH
Q 008159 356 VFVTQEEQSSVTVREVLNDLSLVRAVRFGTQSNYAVNGLE-SLIWMAALVGITSI 409 (575)
Q Consensus 356 ~~vT~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vcGp~-~~~~~~~v~~~~~~ 409 (575)
+.+|++++.....++.+.+....-.....+...+|+|||. . |++++.+++..
T Consensus 374 ~a~SRd~~~k~yVqd~l~~~~~~l~~~l~~~~~vYvCGp~~~--M~~~V~~~L~~ 426 (458)
T 3qfs_A 374 VAFSREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARN--MARDVQNTFYD 426 (458)
T ss_dssp EEETTSSSSCCCHHHHHHHTHHHHHHHHHTTCEEEEEEETTT--HHHHHHHHHHH
T ss_pred EEEECCCCCcccHhHHHHHhHHHHHHHhcCCCEEEEECCCHH--HHHHHHHHHHH
Confidence 8889987654455555543321101112346789999995 7 88999988777
No 34
>3qe2_A CPR, P450R, NADPH--cytochrome P450 reductase; cypor, antley-bixler syndrome, flavoprotein, FMN, FAD, oxidoreductase; HET: FAD FMN NAP; 1.75A {Homo sapiens} PDB: 3qfc_A* 3qfr_A* 1amo_A* 1j9z_A* 1ja0_A* 1ja1_A* 3es9_A* 3ojw_A* 3ojx_A* 3fjo_A* 1b1c_A*
Probab=99.75 E-value=3.6e-18 Score=188.69 Aligned_cols=178 Identities=17% Similarity=0.145 Sum_probs=130.6
Q ss_pred CCccccCccccCCCCCCCcEEEEEEe-----------CCCccHHHHHHHHhcccCCcccCcce-----eEEEeCCCCCCC
Q 008159 214 KFQWHSFSITSSSSVDDQTMSLIVKC-----------DGEWTSSLYQMIHAELDSDADQMRCI-----PVAIEGPYGPAT 277 (575)
Q Consensus 214 ~~~~hpfSI~s~p~~~~~~l~l~Ik~-----------~G~~T~~L~~~~~~~~~~~~~~~~g~-----~v~v~GPyG~~~ 277 (575)
+++.|+|||+|+|...++.++|+|+. .|..|++|++... .|+ .|.|.||+|.|.
T Consensus 391 ~l~pR~YSIsSsp~~~~~~i~ltv~vv~~~~~~~~~~~G~~S~~L~~l~~----------~Gd~~~~~~v~v~~p~g~F~ 460 (618)
T 3qe2_A 391 RLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKEP----------VGENGGRALVPMFVRKSQFR 460 (618)
T ss_dssp BCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSCEEECHHHHHHHTCCC----------C-----CCEEEEEEECCSCC
T ss_pred ccccceeccccCCcCCCCEEEEEEEEEEEecCCCCCCCCcccHHHHhhcc----------cCCCCcceEEEEEEecCccc
Confidence 45789999999987556788888753 4889999987543 355 899999999988
Q ss_pred CCcCCCCeEEEEEeCCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeCCc-chhhhHHhHHHHhhhccCCCceeEEEE
Q 008159 278 MDFLRYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIKSS-QEICLLNSISPLLSNQQSKKWHLTLKV 356 (575)
Q Consensus 278 ~~~~~~~~vvlIagGiGITP~lsil~~l~~~~~~~~~~~~~~v~li~~~r~~-~~l~~~~~l~~~l~~~~~~~~~l~~~~ 356 (575)
++.....+++|||||+|||||++++++.......+ ....++.|+|++|+. +|+.|.+++.++..+ ....++++
T Consensus 461 lp~~~~~piimIg~GtGIAPfrs~l~~r~~~~~~g--~~~~~~~L~~G~R~~~~D~ly~~el~~~~~~----g~l~~l~~ 534 (618)
T 3qe2_A 461 LPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQG--KEVGETLLYYGCRRSDEDYLYREELAQFHRD----GALTQLNV 534 (618)
T ss_dssp CCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHTT--CCCCCEEEEEEESCTTTSCTTHHHHHHHHHH----TSSSEEEE
T ss_pred CCCCCCCCeEEEcCCcchhhHHHHHHHHHHHHhcC--CCCCCEEEEEecCCCccccchHHHHHHHHhc----CCCcEEEE
Confidence 76556778999999999999999999987542111 124679999999999 599999999876432 12237888
Q ss_pred EEeCCCCCcchhhhhhchhhhhhhhccCCCceeEEecCC-chHHHHHHHHHHHH
Q 008159 357 FVTQEEQSSVTVREVLNDLSLVRAVRFGTQSNYAVNGLE-SLIWMAALVGITSI 409 (575)
Q Consensus 357 ~vT~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vcGp~-~~~~~~~v~~~~~~ 409 (575)
.+|++++.....++++.+....-.....+...+|+|||. + |++++..++..
T Consensus 535 a~Srd~~~k~yVqd~l~~~~~~l~~~l~~~a~vYvCGp~~~--M~~~V~~~L~~ 586 (618)
T 3qe2_A 535 AFSREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARN--MARDVQNTFYD 586 (618)
T ss_dssp EETTSSSSCCCHHHHHHHTHHHHHHHHHHTCEEEEEEETTT--HHHHHHHHHHH
T ss_pred EEcCCCCCCCcHHHHHHHhHHHHHHHHhCCcEEEEECCchH--HHHHHHHHHHH
Confidence 899987655555555544321111112345789999995 8 99999988777
No 35
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=99.71 E-value=7.5e-18 Score=153.88 Aligned_cols=127 Identities=9% Similarity=0.084 Sum_probs=86.4
Q ss_pred ccee-EEEeCCCCCCCCCcCCCCeEEEEEeCCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeCCcchhhhHHhHHHH
Q 008159 263 RCIP-VAIEGPYGPATMDFLRYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIKSSQEICLLNSISPL 341 (575)
Q Consensus 263 ~g~~-v~v~GPyG~~~~~~~~~~~vvlIagGiGITP~lsil~~l~~~~~~~~~~~~~~v~li~~~r~~~~l~~~~~l~~~ 341 (575)
+|+. +.|.||+|++... ...++++||||||||||++||++++.+.+ .+++|+ ++|+.+++.|.+++.++
T Consensus 3 ~Gd~vl~v~gP~G~~f~~-~~~~~~llIaGG~GItPl~sm~~~l~~~~--------~~v~l~-g~r~~~d~~~~~el~~l 72 (158)
T 3lrx_A 3 EGDSLLNVAGPLGTPVPM-EKFGKILAIGAYTGIVEVYPIAKAWQEIG--------NDVTTL-HVTFEPMVILKEELEKA 72 (158)
T ss_dssp ---------CCCCCCBCC-CCCSEEEEEEETTHHHHHHHHHHHHHHHT--------CEEEEE-EECBGGGCCSHHHHHHH
T ss_pred CCCEeeEEECCCCCCCcc-CCCCeEEEEEccCcHHHHHHHHHHHHhcC--------CcEEEE-EeCCHHHhhHHHHHHHH
Confidence 5899 6999999997542 35789999999999999999999998652 589999 99999999999999774
Q ss_pred hhhccCCCceeEEEEEEeCCC----CCcchhhhhhchhhhhhhhccCCCceeEEecCCchHHHHHHHHHHHH
Q 008159 342 LSNQQSKKWHLTLKVFVTQEE----QSSVTVREVLNDLSLVRAVRFGTQSNYAVNGLESLIWMAALVGITSI 409 (575)
Q Consensus 342 l~~~~~~~~~l~~~~~vT~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~vcGp~~~~~~~~v~~~~~~ 409 (575)
. .++.+...+++++ +.+.+.+|++++... +.+...+.+.+|+|||++ ||+++.+.+.+
T Consensus 73 ~-------~~~~~~~v~~~~~~~~~~~~~g~~G~v~~~l~-~~l~~~~~~~vy~CGP~~--mm~~v~~~l~~ 134 (158)
T 3lrx_A 73 V-------TRHIVEPVPLNPNQDFLANMKNVSQRLKEKVR-ELLESEDWDLVFMVGPVG--DQKQVFEVVKE 134 (158)
T ss_dssp S-------SEEEECCBCCCTTSCHHHHHHHHHHHHHHHHH-HHHHHSCCSEEEEESCHH--HHHHHHHHHGG
T ss_pred H-------hceEEEEeeccccccCCCCCCCCcccccHHHH-HhhccCCCCEEEEECCHH--HHHHHHHHHHH
Confidence 2 1232221222221 123456788886432 222222446799999999 99999888765
No 36
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=99.71 E-value=1.4e-17 Score=149.11 Aligned_cols=123 Identities=10% Similarity=0.100 Sum_probs=88.0
Q ss_pred EEEeCCCCCCCCCcCCCCeEEEEEeCCChhhHHHHHHHHHHhhccCCCCCCceEEEEEEeCCcchhhhHHhHHHHhhhcc
Q 008159 267 VAIEGPYGPATMDFLRYDSLLLVAGGIGITPFLSILQEIASAQSNRKYRFPSKVQLIYVIKSSQEICLLNSISPLLSNQQ 346 (575)
Q Consensus 267 v~v~GPyG~~~~~~~~~~~vvlIagGiGITP~lsil~~l~~~~~~~~~~~~~~v~li~~~r~~~~l~~~~~l~~~l~~~~ 346 (575)
+.|.||+|++... ...++++||||||||||++||++++.+.+ .+++++ ++|+.+++.+.+++.++.
T Consensus 3 ~~v~GP~G~~~~~-~~~~~~llIaGG~GiaPl~sm~~~l~~~~--------~~v~l~-g~R~~~~~~~~~el~~l~---- 68 (142)
T 3lyu_A 3 LNVAGPLGTPVPM-EKFGKILAIGAYTGIVEVYPIAKAWQEIG--------NDVTTL-HVTFEPMVILKEELEKAV---- 68 (142)
T ss_dssp ----CCCSCCBCC-CCCSEEEEEEETTHHHHHHHHHHHHHHTT--------CEEEEE-EEEEGGGCCSHHHHHTTS----
T ss_pred eeeeCCCCCCccC-CCCCeEEEEECcCcHHHHHHHHHHHHhcC--------CcEEEE-EeCCHHHhhHHHHHHHHH----
Confidence 5689999998654 45789999999999999999999998652 679999 999999999999987631
Q ss_pred CCCceeEEEEEEeCCC----CCcchhhhhhchhhhhhhhccCCCceeEEecCCchHHHHHHHHHHHH
Q 008159 347 SKKWHLTLKVFVTQEE----QSSVTVREVLNDLSLVRAVRFGTQSNYAVNGLESLIWMAALVGITSI 409 (575)
Q Consensus 347 ~~~~~l~~~~~vT~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~vcGp~~~~~~~~v~~~~~~ 409 (575)
.++.+..++++++ +.+.+.+|++++... +.....+.+.+|+|||++ ||+++.+.+.+
T Consensus 69 ---~~~~~~~~~~~~~~~~~d~~~g~~G~v~~~l~-~~~~~~~~~~vy~CGP~~--Mm~av~~~l~~ 129 (142)
T 3lyu_A 69 ---TRHIVEPVPLNPNQDFLANMKNVSQRLKEKVR-ELLESEDWDLVFMVGPVG--DQKQVFEVVKE 129 (142)
T ss_dssp ---SEEEEEEECCCTTSCHHHHHHHHHHHHHHHHH-HHHHSSCCSEEEEESCHH--HHHHHHHHHHH
T ss_pred ---hheEEEEeecccccCCCCCCCCCccchhHHHH-HhcccCCCCEEEEECCHH--HHHHHHHHHHH
Confidence 2333333333321 123456788876443 222223446799999999 99999988877
No 37
>1awd_A Ferredoxin; electron transport, eukaryotic, green ALGA, electron transfer, metalloprotein; 1.40A {'chlorella' fusca} SCOP: d.15.4.1
Probab=98.15 E-value=2.1e-08 Score=82.53 Aligned_cols=54 Identities=2% Similarity=-0.144 Sum_probs=47.3
Q ss_pred cccccccCchhHHHHHHHHHHHHHhhhhhHHHHHHHHhhhhcCCCCCCcCCCcc
Q 008159 440 KVVSKEKTPSWVADLIILSSFIIAITGSTLMAILLRWRRLKKQTPPVSLNQGKA 493 (575)
Q Consensus 440 ~~~~~~~~~~sll~~l~~~g~~~~~~C~~G~C~~C~~~~~~g~v~~~~~~~~~~ 493 (575)
++++.+++++|||++++++|+.++++|+.|.||+|++++.+|++++.....+++
T Consensus 11 ~~~~~~~~g~tlL~a~~~~gi~i~~~C~~G~Cg~C~v~v~~G~~~~~e~~~L~~ 64 (94)
T 1awd_A 11 EETIECPEDTYILDAAEEAGLDLPYSCRAGACSSCAGKVESGEVDQSDQSFLDD 64 (94)
T ss_dssp EEEEECCTTSCHHHHHHHTTCCCCCSSSSSSSSTTEEEEEESCEECTTCCSSCH
T ss_pred cEEEEECCCCcHHHHHHHcCCCCCcCCCCCcCCCCEEEEEeCCcCccccccCCH
Confidence 467888999999999999999999999999999999999999888765555543
No 38
>1frd_A Heterocyst [2Fe-2S] ferredoxin; electron transport; 1.70A {Nostoc SP} SCOP: d.15.4.1
Probab=98.14 E-value=2e-08 Score=83.36 Aligned_cols=54 Identities=2% Similarity=-0.179 Sum_probs=47.4
Q ss_pred cccccccCchhHHHHHHHHHHHHHhhhhhHHHHHHHHhhhhcCCCCCCcCCCcc
Q 008159 440 KVVSKEKTPSWVADLIILSSFIIAITGSTLMAILLRWRRLKKQTPPVSLNQGKA 493 (575)
Q Consensus 440 ~~~~~~~~~~sll~~l~~~g~~~~~~C~~G~C~~C~~~~~~g~v~~~~~~~~~~ 493 (575)
+++++++.++|||++++++|+.+|++|+.|.||+|++++.+|++++.....+++
T Consensus 15 ~~~~~~~~g~tlL~a~~~~gi~i~~~C~~G~Cg~C~v~v~~G~~~~~e~~~L~~ 68 (98)
T 1frd_A 15 DTTIEIDEETTILDGAEENGIELPFSCHSGSCSSCVGKVVEGEVDQSDQIFLDD 68 (98)
T ss_dssp EEEEEEETTSCHHHHHHHTTCCCCCSSSSSSSSTTEEEEEESCEECTTCCSCCH
T ss_pred CEEEEeCCCCcHHHHHHHcCCCcccCCCCCCCCCCEEEEEeCCccccccccCCH
Confidence 678888999999999999999999999999999999999999887665544443
No 39
>1iue_A Ferredoxin; electron transport, iron-sulfur; 1.70A {Plasmodium falciparum} SCOP: d.15.4.1
Probab=98.13 E-value=2e-08 Score=83.31 Aligned_cols=61 Identities=3% Similarity=-0.112 Sum_probs=50.3
Q ss_pred cccCCcccccccccCchhHHHHHHHHHHHHHhhhhhHHHHHHHHhhhhcCCCCCCcCCCcc
Q 008159 433 KLAAPSEKVVSKEKTPSWVADLIILSSFIIAITGSTLMAILLRWRRLKKQTPPVSLNQGKA 493 (575)
Q Consensus 433 ~~~~~~~~~~~~~~~~~sll~~l~~~g~~~~~~C~~G~C~~C~~~~~~g~v~~~~~~~~~~ 493 (575)
++..++..+++.+++++|||++++++|+.++++|+.|.||+|++++.+|++++.....+++
T Consensus 6 ~~~~~~~~~~~~~~~g~tlL~a~~~~gi~i~~~C~~G~Cg~C~v~v~~G~~~~~e~~~L~~ 66 (98)
T 1iue_A 6 TLRTNDGEKKIECNEDEYILDASERQNVELPYSCRGGSCSTCAAKLVEGEVDNDDQSYLDE 66 (98)
T ss_dssp EEEETTEEEEEEEETTSCHHHHHHHTTCCCCCSSCSSSSSTTEEEEEESCEECTTCCSSCH
T ss_pred EEEeCCCeEEEEeCCCCcHHHHHHHcCCCCCCCCCCCcCCCCEEEEeeCCccccccccCCH
Confidence 3443443477888999999999999999999999999999999999999987766555544
No 40
>1doi_A 2Fe-2S ferredoxin; halophilic protein, redox protein, iron-sulfur, electron transport; 1.90A {Haloarcula marismortui} SCOP: d.15.4.1 PDB: 1e0z_A* 1e10_A
Probab=98.11 E-value=2.8e-08 Score=86.30 Aligned_cols=60 Identities=3% Similarity=-0.137 Sum_probs=50.1
Q ss_pred ccCCcccc-cccccCchhHHHHHHHHHHHHHhhhhhHHHHHHHHhhhhcCCCCCCcCCCcc
Q 008159 434 LAAPSEKV-VSKEKTPSWVADLIILSSFIIAITGSTLMAILLRWRRLKKQTPPVSLNQGKA 493 (575)
Q Consensus 434 ~~~~~~~~-~~~~~~~~sll~~l~~~g~~~~~~C~~G~C~~C~~~~~~g~v~~~~~~~~~~ 493 (575)
+++...++ +++++.++|+|++++++|+.++++|+.|.||+|++++.+|++++..+..+++
T Consensus 30 i~i~~~g~~~v~v~~g~tlL~aa~~~Gi~i~~~C~~G~CgtC~v~v~~G~v~~~e~~~L~~ 90 (128)
T 1doi_A 30 MDLDDEDYGSLEVNEGEYILEAAEAQGYDWPFSCRAGACANCAAIVLEGDIDMDMQQILSD 90 (128)
T ss_dssp SCCCTTTEEEEECCTTSCHHHHHHHTTCCCCCSSSSSSSSTTEEEEEESCEEECCCSSSCH
T ss_pred EEEEeCCcEEEEECCCCcHHHHHHHcCCCCccCCCccCCCCCEeEEecCCcCchhhccCCH
Confidence 33444455 7788899999999999999999999999999999999999987765555544
No 41
>1frr_A Ferredoxin I; electron transfer(iron-sulfur protein); 1.80A {Equisetum arvense} SCOP: d.15.4.1
Probab=98.10 E-value=2.6e-08 Score=82.14 Aligned_cols=54 Identities=2% Similarity=-0.166 Sum_probs=47.1
Q ss_pred cccccccCchhHHHHHHHHHHHHHhhhhhHHHHHHHHhhhhcCCCCCCcCCCcc
Q 008159 440 KVVSKEKTPSWVADLIILSSFIIAITGSTLMAILLRWRRLKKQTPPVSLNQGKA 493 (575)
Q Consensus 440 ~~~~~~~~~~sll~~l~~~g~~~~~~C~~G~C~~C~~~~~~g~v~~~~~~~~~~ 493 (575)
.+++++++++|||++++++|+.++++|+.|.||+|++++.+|++++.....+++
T Consensus 12 ~~~~~~~~g~tlL~a~~~~gi~i~~~C~~G~Cg~C~v~v~~G~~~~~~~~~L~~ 65 (95)
T 1frr_A 12 EFTLDVPEGTTILDAAEEAGYDLPFSCRAGACSSCLGKVVSGSVDESEGSFLDD 65 (95)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCCCCSSSSSSSSTTEEEEEESCEECTTCCSCCH
T ss_pred cEEEEeCCCCcHHHHHHHcCCCCCCCCCCcCCCCCEEEEEeCCccccccccCCH
Confidence 477888999999999999999999999999999999999999887765554443
No 42
>1jq4_A Methane monooxygenase component C; [2Fe-2S] ferredoxin, oxidoreductase; NMR {Methylococcus capsulatus str} SCOP: d.15.4.2
Probab=98.09 E-value=3.8e-08 Score=81.62 Aligned_cols=54 Identities=6% Similarity=-0.097 Sum_probs=47.8
Q ss_pred ccccCC---cccccccccCchhHHHHHHHHHHHHHhhhhhHHHHHHHHhhhhcCCCC
Q 008159 432 EKLAAP---SEKVVSKEKTPSWVADLIILSSFIIAITGSTLMAILLRWRRLKKQTPP 485 (575)
Q Consensus 432 ~~~~~~---~~~~~~~~~~~~sll~~l~~~g~~~~~~C~~G~C~~C~~~~~~g~v~~ 485 (575)
+++++. ++++++.+++++|||++++++|+.++++|+.|.||+|++++.+|++++
T Consensus 5 ~~v~~~~~~~~~~~~~~~~g~tlL~a~~~~gi~i~~~C~~G~Cg~C~v~v~~G~~~~ 61 (98)
T 1jq4_A 5 HTITAVTEDGESLRFECRSDEDVITAALRQNIFLMSSCREGGCATCKALCSEGDYDL 61 (98)
T ss_dssp EEEEEEETTTEEEEEEEESCCTHHHHHHHHTCCCCCSCCSSCCCCCCBCEEECCCCC
T ss_pred EEEEEEecCCCcEEEEeCCCChHHHHHHHcCCCCcCCCCCCCCCCCEEEEEcCcccc
Confidence 344444 677888889999999999999999999999999999999999999876
No 43
>1wri_A Ferredoxin II, ferredoxin; electron transport; 1.20A {Equisetum arvense} SCOP: d.15.4.1
Probab=98.07 E-value=4.4e-08 Score=80.37 Aligned_cols=60 Identities=5% Similarity=-0.075 Sum_probs=49.0
Q ss_pred cccCCcccccccccCchhHHHHHHHHHHHHHhhhhhHHHHHHHHhhhhcCCCCCCcCCCcc
Q 008159 433 KLAAPSEKVVSKEKTPSWVADLIILSSFIIAITGSTLMAILLRWRRLKKQTPPVSLNQGKA 493 (575)
Q Consensus 433 ~~~~~~~~~~~~~~~~~sll~~l~~~g~~~~~~C~~G~C~~C~~~~~~g~v~~~~~~~~~~ 493 (575)
++..++..+++.+++++|||++++++| .++++|+.|.||+|++++.+|++++..+..+++
T Consensus 5 ~~~~~~~~~~~~~~~g~tlL~a~~~~g-~i~~~C~~G~Cg~C~v~v~~G~~~~~e~~~L~~ 64 (93)
T 1wri_A 5 TLKTPDGDITFDVEPGERLIDIGSEKA-DLPLSCQAGACSTCLGKIVSGTVDQSEGSFLDD 64 (93)
T ss_dssp EEEETTEEEEEEECTTSCHHHHHHHHS-CCCCSSSSSSSSTTEEEEEESCEECTTCCSCCH
T ss_pred EEEECCCeEEEEECCCCcHHHHHHHCc-CCCCCCCCCCCCCCEEEEecCccCccccccCCH
Confidence 333333346778889999999999999 999999999999999999999988766555543
No 44
>1a70_A Ferredoxin; iron-sulfur protein, photosynthesis, electron transport; 1.70A {Spinacia oleracea} SCOP: d.15.4.1 PDB: 1pfd_A
Probab=98.06 E-value=3.2e-08 Score=81.87 Aligned_cols=54 Identities=4% Similarity=-0.188 Sum_probs=47.2
Q ss_pred cccccccCchhHHHHHHHHHHHHHhhhhhHHHHHHHHhhhhcCCCCCCcCCCcc
Q 008159 440 KVVSKEKTPSWVADLIILSSFIIAITGSTLMAILLRWRRLKKQTPPVSLNQGKA 493 (575)
Q Consensus 440 ~~~~~~~~~~sll~~l~~~g~~~~~~C~~G~C~~C~~~~~~g~v~~~~~~~~~~ 493 (575)
.++++++.++|||++++++|+.++++|+.|.||+|++++.+|++++..+..+++
T Consensus 13 ~~~~~~~~g~tlL~a~~~~gi~i~~~C~~G~Cg~C~v~v~~G~~~~~e~~~L~~ 66 (97)
T 1a70_A 13 NVEFQCPDDVYILDAAEEEGIDLPYSCRAGSCSSCAGKLKTGSLNQDDQSFLDD 66 (97)
T ss_dssp EEEEEEETTSCHHHHHHHTTCCCCCSSSSSCSSTTEEEEEESCEECTTCCSSCH
T ss_pred eEEEEeCCCCcHHHHHHHcCCCcccCCCCcCCCCCeEEEccCCcCccccccCCH
Confidence 467788899999999999999999999999999999999999887765555543
No 45
>1czp_A Ferredoxin I; [2Fe-2S] protein, crystal reduced with dithionite, electron; 1.17A {Nostoc SP} SCOP: d.15.4.1 PDB: 1ewy_C* 1fxa_A 1qt9_A 1qog_A 1j7c_A 1j7b_A 1qof_A 1qob_A 1j7a_A 1qoa_A 1rfk_A 3p63_A 4fxc_A 3ab5_A 1roe_A 2cjn_A 2cjo_A 1off_A 1dox_A 1doy_A ...
Probab=98.04 E-value=4.1e-08 Score=81.40 Aligned_cols=53 Identities=4% Similarity=-0.100 Sum_probs=46.7
Q ss_pred cccccccCchhHHHHHHHHHHHHHhhhhhHHHHHHHHhhhhcCCCCCCcCCCc
Q 008159 440 KVVSKEKTPSWVADLIILSSFIIAITGSTLMAILLRWRRLKKQTPPVSLNQGK 492 (575)
Q Consensus 440 ~~~~~~~~~~sll~~l~~~g~~~~~~C~~G~C~~C~~~~~~g~v~~~~~~~~~ 492 (575)
+++++++.++||||+++++|+.++++|+.|.||+|++++.+|++++.....++
T Consensus 15 ~~~~~~~~g~tlL~a~~~~gi~i~~~C~~G~Cg~C~v~v~~G~~~~~e~~~L~ 67 (98)
T 1czp_A 15 KHEIEVPDDEYILDAAEEQGYDLPFSCRAGACSTCAGKLVSGTVDQSDQSFLD 67 (98)
T ss_dssp EEEEEEETTSCHHHHHHHTTCCCCCSSSSSSSSTTEEEEEESCEECTTCCSSC
T ss_pred cEEEEeCCCCCHHHHHHHcCCCccCCCCCCCCCCCeEEEccCCcCccccccCC
Confidence 57788899999999999999999999999999999999999988766554444
No 46
>1l5p_A Ferredoxin; [2Fe-2S] cluster, electron transfer, iron-sulfur protein, metalloprotein, oxidoreductase; 2.20A {Trichomonas vaginalis} SCOP: d.15.4.1
Probab=97.75 E-value=3.4e-07 Score=75.01 Aligned_cols=55 Identities=5% Similarity=-0.102 Sum_probs=47.6
Q ss_pred ccccCCcccccccccCchhHHHHHHHHHHH-HHhhhh-hHHHHHHHHhhhhcCCCCC
Q 008159 432 EKLAAPSEKVVSKEKTPSWVADLIILSSFI-IAITGS-TLMAILLRWRRLKKQTPPV 486 (575)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~sll~~l~~~g~~-~~~~C~-~G~C~~C~~~~~~g~v~~~ 486 (575)
+++..++..+++++++++|||++++++|+. ++++|+ .|.||+|++++.+|+++..
T Consensus 3 v~i~~~g~~~~~~~~~g~tll~a~~~~gi~gi~~~C~G~G~Cg~C~v~v~~g~~~~~ 59 (93)
T 1l5p_A 3 ITAVKGGVKKQLKFEDDQTLFTVLTEAGLMSADDTCQGNKACGKCICKHVSGKVAAA 59 (93)
T ss_dssp EEEEETTEEEEEECCTTEEHHHHHHTTTSSCCTTSCSSSSSSCCCEEEEEESCCCCC
T ss_pred EEEEeCCcEEEEEECCCChHHHHHHHcCCCcCCcCCCCcCCcCCCEEEECCCcCCCC
Confidence 455666666788889999999999999999 999999 9999999999999877543
No 47
>2wlb_A ETP1-FD, electron transfer protein 1, mitochondrial; iron-sulfur, iron, transport, ferredoxin, adrenodoxin-like, electron transport; 2.60A {Schizosaccharomyces pombe}
Probab=97.72 E-value=2.2e-07 Score=77.66 Aligned_cols=55 Identities=4% Similarity=-0.071 Sum_probs=46.2
Q ss_pred cccc-CCcccccccccCchhHHHHHHHHHHHHHhhhh-hHHHHHHHHhhhhcCCCCC
Q 008159 432 EKLA-APSEKVVSKEKTPSWVADLIILSSFIIAITGS-TLMAILLRWRRLKKQTPPV 486 (575)
Q Consensus 432 ~~~~-~~~~~~~~~~~~~~sll~~l~~~g~~~~~~C~-~G~C~~C~~~~~~g~v~~~ 486 (575)
+++. .++..+++.++.++|||++++++|+.++++|+ .|.||+|++++.+|++++.
T Consensus 6 v~~~~~~g~~~~~~~~~g~tlL~a~~~~gi~i~~~C~g~G~Cg~C~v~v~~g~~~~~ 62 (103)
T 2wlb_A 6 VFFVTPEGREIMIEGNEGDSILDLAHANNIDLEGACEGSVACSTCHVIVDPEHYELL 62 (103)
T ss_dssp EEEECTTCCEEEEEECTTCBHHHHHHHTTCCCCCTTTTSSCCSTTEEEECHHHHHHS
T ss_pred EEEEeCCCCEEEEEECCCCHHHHHHHHcCCCcCcCCCCCCCcCCCEEEECCCchhcc
Confidence 3444 44544788889999999999999999999999 6999999999999977654
No 48
>1xlq_A Putidaredoxin, PDX; [2Fe-2S], ferredoxin, oxidoreductase; 1.45A {Pseudomonas putida} SCOP: d.15.4.1 PDB: 1xlp_A 1oqr_A 1r7s_A 1pdx_A 1yji_A 1yjj_A 1oqq_A 1xln_A 1xlo_A 3lb8_C* 1put_A 1gpx_A
Probab=97.71 E-value=2.8e-07 Score=77.54 Aligned_cols=48 Identities=4% Similarity=-0.163 Sum_probs=41.9
Q ss_pred CCcccccccccCchhHHHHHHHHHHH-HHhhhh-hHHHHHHHHhhhhcCC
Q 008159 436 APSEKVVSKEKTPSWVADLIILSSFI-IAITGS-TLMAILLRWRRLKKQT 483 (575)
Q Consensus 436 ~~~~~~~~~~~~~~sll~~l~~~g~~-~~~~C~-~G~C~~C~~~~~~g~v 483 (575)
.++..++++++.++|||++++++|++ +++.|+ .|.||+|++++.+|.+
T Consensus 8 ~~g~~~~~~~~~g~tlLeaa~~~gi~~i~~~C~g~G~CgtC~v~v~~g~~ 57 (106)
T 1xlq_A 8 HDGTRRELDVADGVSLMQAAVSNGIYDIVGDCGGSASCATCHVYVNEAFT 57 (106)
T ss_dssp TTSCEEEEECCTTCBHHHHHHHTTCTTSCCTTCSSSSSCTTEEEECTTTG
T ss_pred CCCCEEEEEECCCCcHHHHHHHcCCCCCCcCCCCCcccCcCEEEECCccc
Confidence 34444788889999999999999999 999996 7999999999999944
No 49
>1i7h_A Ferredoxin; 2Fe-2S,electron transport; 1.70A {Escherichia coli} SCOP: d.15.4.1
Probab=97.69 E-value=6.2e-07 Score=76.03 Aligned_cols=48 Identities=6% Similarity=-0.066 Sum_probs=43.2
Q ss_pred ccccccccCchhHHHHHHHHHHHHHhhh-hhHHHHHHHHhhhhcCCCCC
Q 008159 439 EKVVSKEKTPSWVADLIILSSFIIAITG-STLMAILLRWRRLKKQTPPV 486 (575)
Q Consensus 439 ~~~~~~~~~~~sll~~l~~~g~~~~~~C-~~G~C~~C~~~~~~g~v~~~ 486 (575)
++++++++.++|||++++++|+.++++| +.|.||+|++++.+|.+.+.
T Consensus 15 ~~~~~~~~~g~tlL~a~~~~gi~i~~~C~~~G~Cg~C~v~v~~G~~~~~ 63 (111)
T 1i7h_A 15 DGAVLEANSGETILDAALRNGIEIEHACEKSCACTTCHCIVREGFDSLP 63 (111)
T ss_dssp TCEEEECCTTCBHHHHHHHTTCCCCCTTSSSSCCSTTEEEEEECGGGSC
T ss_pred CCeEEEeCCCCcHHHHHHHcCCCCcccCCCCCcCCCCEEEEccCcccCC
Confidence 5678888999999999999999999999 58999999999999976654
No 50
>1uwm_A Ferredoxin VI, FDVI; electron transport, metal-binding, iron-sulfur, iron, 2Fe-2S; 2.0A {Rhodobacter capsulatus} SCOP: d.15.4.1 PDB: 1e9m_A
Probab=97.66 E-value=5.4e-07 Score=75.76 Aligned_cols=50 Identities=6% Similarity=-0.201 Sum_probs=42.7
Q ss_pred CCcccccccccCchhHHHHHHHHHHH-HHhhhh-hHHHHHHHHhhhhcCCCC
Q 008159 436 APSEKVVSKEKTPSWVADLIILSSFI-IAITGS-TLMAILLRWRRLKKQTPP 485 (575)
Q Consensus 436 ~~~~~~~~~~~~~~sll~~l~~~g~~-~~~~C~-~G~C~~C~~~~~~g~v~~ 485 (575)
.++..++++++.++|||++++++|++ ++++|+ .|.||+|++++.+|.++.
T Consensus 8 ~~g~~~~~~~~~g~tlL~aa~~~gi~~i~~~C~g~G~CgtC~v~v~~g~~~~ 59 (106)
T 1uwm_A 8 HNGTRHEVEAKPGLTVMEAARDNGVPGIDADCGGACACSTCHAYVDPAWVDK 59 (106)
T ss_dssp TTCCEEEEECCTTSBHHHHHHTTTCTTCCCTTSSSSSSCTTEEEECHHHHTT
T ss_pred CCCCEEEEEECCCCcHHHHHHHcCCCCcccCCCCCCCcCcCEEEECCccccc
Confidence 33444788889999999999999999 999995 799999999999985443
No 51
>2y5c_A Adrenodoxin-like protein, mitochondrial; electron transport, iron-sulfur cluster biogenesis; 1.70A {Homo sapiens}
Probab=97.61 E-value=6.3e-07 Score=75.72 Aligned_cols=50 Identities=6% Similarity=-0.061 Sum_probs=42.7
Q ss_pred CcccccccccCchhHHHHHHHHHHHHHhhhhh-HHHHHHHHhhhhcCCCCC
Q 008159 437 PSEKVVSKEKTPSWVADLIILSSFIIAITGST-LMAILLRWRRLKKQTPPV 486 (575)
Q Consensus 437 ~~~~~~~~~~~~~sll~~l~~~g~~~~~~C~~-G~C~~C~~~~~~g~v~~~ 486 (575)
++..++++++.++|||++++++|++++++|++ |.||+|++++.+|.++..
T Consensus 14 ~g~~~~~~~~~g~tlL~aa~~~gi~i~~~C~g~G~CgtC~v~v~~g~~~~l 64 (109)
T 2y5c_A 14 SGQRIPVSGRVGDNVLHLAQRHGVDLEGACEASLACSTCHVYVSEDHLDLL 64 (109)
T ss_dssp TSCEEEEEEETTCBHHHHHHHTTCCCCCTTSSSSSCCTTEEEECHHHHTTS
T ss_pred CCCEEEEEECCCCcHHHHHHHcCCCCCcCCCCCcCcCccEEEECCcchhhc
Confidence 34444578889999999999999999999998 999999999999966544
No 52
>3lxf_A Ferredoxin; iron, iron-sulfur, metal-binding, metal protein; 2.30A {Novosphingobium aromaticivorans} SCOP: d.15.4.0
Probab=97.58 E-value=1.1e-06 Score=73.37 Aligned_cols=50 Identities=0% Similarity=-0.175 Sum_probs=44.0
Q ss_pred CcccccccccCchhHHHHHHHHHHH-HHhhhh-hHHHHHHHHhhhhcCCCCC
Q 008159 437 PSEKVVSKEKTPSWVADLIILSSFI-IAITGS-TLMAILLRWRRLKKQTPPV 486 (575)
Q Consensus 437 ~~~~~~~~~~~~~sll~~l~~~g~~-~~~~C~-~G~C~~C~~~~~~g~v~~~ 486 (575)
++..++++++.++|||++++++|++ ++++|+ .|.||+|++++.+|+++..
T Consensus 9 ~G~~~~~~~~~g~tll~a~~~~gi~~i~~~C~G~G~CgtC~v~v~~g~~~~l 60 (104)
T 3lxf_A 9 DGTRTEIQAEPGLSLMEALRDAGIDELLALCGGCCSCATCHVLVAPAFADRL 60 (104)
T ss_dssp TSCEEEEECCTTSBHHHHHHHTTCTTCCCTTCSSSSCSTTEEEECGGGGGGS
T ss_pred CCCEEEEEECCCChHHHHHHHcCCCCCCcCCCCCCCCCCCEEEECCcccccC
Confidence 4555678889999999999999999 999999 8999999999999976543
No 53
>1b9r_A Protein (terpredoxin); structure from molmol, ferredoxin; NMR {Pseudomonas SP} SCOP: d.15.4.1
Probab=97.56 E-value=5.4e-07 Score=75.58 Aligned_cols=47 Identities=6% Similarity=-0.035 Sum_probs=41.4
Q ss_pred CCcccccccccCchhHHHHHHHHHHH-HHhhhh-hHHHHHHHHhhhhcC
Q 008159 436 APSEKVVSKEKTPSWVADLIILSSFI-IAITGS-TLMAILLRWRRLKKQ 482 (575)
Q Consensus 436 ~~~~~~~~~~~~~~sll~~l~~~g~~-~~~~C~-~G~C~~C~~~~~~g~ 482 (575)
.++..++++++.++|||++++++|++ +++.|+ .|.||+|++++.+|.
T Consensus 8 ~~g~~~~~~~~~g~tlL~aa~~~gi~~i~~~C~g~G~CgtC~v~v~~G~ 56 (105)
T 1b9r_A 8 EQSGEYAVDAQDGQSLMEVATQNGVPGIVAECGGSCVCATCRIEIEDAW 56 (105)
T ss_dssp TTTSCEEEECCTTCCTTHHHHHHTCCCCCCSSTTSSCCCCCCCEECTTT
T ss_pred CCCCEEEEEECCCChHHHHHHHcCCCCcCcCCCCCCCcCcCEEEECCcc
Confidence 34444778889999999999999999 999999 599999999999993
No 54
>2bt6_A Adrenodoxin 1; ruthenium(II) bipyridyl complex, intramolecular electron TRA electron transport, metal-binding; HET: RUA; 1.50A {Bos taurus} SCOP: d.15.4.1 PDB: 1ayf_A 3n9y_C* 2jqr_B* 3na0_C*
Probab=97.53 E-value=1.1e-06 Score=74.17 Aligned_cols=50 Identities=12% Similarity=0.038 Sum_probs=43.0
Q ss_pred CcccccccccCchhHHHHHHHHHHHHH--hhhhh-HHHHHHHHhhhhcCCCCC
Q 008159 437 PSEKVVSKEKTPSWVADLIILSSFIIA--ITGST-LMAILLRWRRLKKQTPPV 486 (575)
Q Consensus 437 ~~~~~~~~~~~~~sll~~l~~~g~~~~--~~C~~-G~C~~C~~~~~~g~v~~~ 486 (575)
++..++++++.++|||++++++|++++ +.|++ |.||+|++++.+|.++..
T Consensus 15 ~g~~~~v~~~~g~tLL~aa~~~gi~i~~~~~Cgg~G~CgtC~v~v~~g~~~~l 67 (108)
T 2bt6_A 15 DGETLTTKGKIGDSLLDVVVQNNLDIDGFGACEGTLACSTCHLIFEQHIFEKL 67 (108)
T ss_dssp TSCEEEEEEETTCBHHHHHHHTTCCCTTTTTTSSSSSBSTTEEECCHHHHTTS
T ss_pred CCCEEEEEECCCChHHHHHHHcCCCCCcccCCCCCcCcCCCEEEECccccccC
Confidence 344457888899999999999999999 99987 999999999999865544
No 55
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=97.47 E-value=1.9e-06 Score=93.61 Aligned_cols=61 Identities=11% Similarity=-0.063 Sum_probs=52.2
Q ss_pred ccccCCcccccccccCchhHHHHHHHHHHHHHhhhh-hHHHHHHHHhhhhcCCCCCCcCCCc
Q 008159 432 EKLAAPSEKVVSKEKTPSWVADLIILSSFIIAITGS-TLMAILLRWRRLKKQTPPVSLNQGK 492 (575)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~sll~~l~~~g~~~~~~C~-~G~C~~C~~~~~~g~v~~~~~~~~~ 492 (575)
++|++..++++++++.++|+|++++++|++++++|+ .|.||+|++++.+|++++..+..++
T Consensus 4 ~~V~~~~sg~~v~v~~G~tLLeAa~~aGi~ip~~C~G~G~CGtC~v~V~~G~v~~~e~~~Ls 65 (631)
T 3zyy_X 4 YKVLFKPDQKEVAISENTNLMEALNLAGINIKTVCGGAGTCGKCLVRVVDGQKRVESYGKLK 65 (631)
T ss_dssp EEEEEETTTEEEEECTTSCHHHHHHHHTCCCCCSCCCSSCCSTTEEEEEESCEEESCCTTCC
T ss_pred eEEEEecCCeEEEECCCCcHHHHHHHcCCCCCcCCCCCCcCCCCEEEEeeCcccccccccCC
Confidence 445556677888999999999999999999999999 8999999999999998776654443
No 56
>3ah7_A [2Fe-2S]ferredoxin; [2Fe-2S] cluster, iron-sulfur cluster biosynthes pseudomonas, metal binding protein; 1.90A {Pseudomonas putida}
Probab=97.45 E-value=2.2e-06 Score=72.91 Aligned_cols=44 Identities=9% Similarity=-0.086 Sum_probs=40.5
Q ss_pred ccccccccCchhHHHHHHHHHHHHHhhhh-hHHHHHHHHhhhhcC
Q 008159 439 EKVVSKEKTPSWVADLIILSSFIIAITGS-TLMAILLRWRRLKKQ 482 (575)
Q Consensus 439 ~~~~~~~~~~~sll~~l~~~g~~~~~~C~-~G~C~~C~~~~~~g~ 482 (575)
.+++++++.++|||++++++|+.+++.|+ .|.||+|++++.+|.
T Consensus 15 ~~~~v~~~~g~tlL~aa~~~Gi~i~~~C~g~G~CgtC~v~v~~G~ 59 (113)
T 3ah7_A 15 EGLTVEVKPGTNILELAHDHHIEMESACGGVKACTTCHCIVRKGF 59 (113)
T ss_dssp TCEEEECCTTCBHHHHHHHTTCCCCCTTCSSSSCSTTEEEEEESG
T ss_pred CCeEEEECCCCcHHHHHHHcCCCCCcCCCCCCCcCCCEEEEcCCc
Confidence 45778889999999999999999999998 599999999999986
No 57
>3hui_A Ferredoxin; cytochrome P450, electron transfer, iron, iron-sulfur, metal-binding, electron transport; 2.01A {Rhodopseudomonas palustris}
Probab=97.39 E-value=2.4e-06 Score=73.73 Aligned_cols=61 Identities=7% Similarity=-0.026 Sum_probs=49.5
Q ss_pred cCCCcCcccccc-CCcccccccccCchhHHHHHHHHHHH-HHhhhh-hHHHHHHHHhhhhcCCC
Q 008159 424 PVEKKLPSEKLA-APSEKVVSKEKTPSWVADLIILSSFI-IAITGS-TLMAILLRWRRLKKQTP 484 (575)
Q Consensus 424 ~~~~~~~~~~~~-~~~~~~~~~~~~~~sll~~l~~~g~~-~~~~C~-~G~C~~C~~~~~~g~v~ 484 (575)
|...+...+++. .++..++++++.++|||++++++|++ ++++|+ .|.||+|++++.+|+++
T Consensus 16 ~~~~~M~~Vt~~~~~G~~~~v~~~~G~tLL~aa~~~gi~gi~~~C~G~G~CgtC~v~v~~G~~~ 79 (126)
T 3hui_A 16 PRGSHMAKINFVDHTGETRTVEVEEGATVMEAAIRNAIPGVEAECGGACACATCHVYVDEAWRE 79 (126)
T ss_dssp CTTCSEEEEEEECTTSCEEEEEEETTSBHHHHHHTTTCTTCCCTTSSSSCCSTTEEEECGGGHH
T ss_pred CCCCCceEEEEEeCCCCEEEEEECCCCcHHHHHHHcCCCCCccCCCCCCCCCCCEEEECCCccc
Confidence 333334456665 55555788899999999999999999 999998 79999999999999753
No 58
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=97.28 E-value=4e-06 Score=85.67 Aligned_cols=48 Identities=6% Similarity=-0.245 Sum_probs=44.7
Q ss_pred cccccccccCchhHHHHHHHHHHHHHhhhhhHHHHHHHHhhhhcCCCC
Q 008159 438 SEKVVSKEKTPSWVADLIILSSFIIAITGSTLMAILLRWRRLKKQTPP 485 (575)
Q Consensus 438 ~~~~~~~~~~~~sll~~l~~~g~~~~~~C~~G~C~~C~~~~~~g~v~~ 485 (575)
+.+++++++.++||||+++++|+.++++|+.|.||+|++++.+|++++
T Consensus 13 ~~~~~~~~~~g~tll~a~~~~gi~i~~~C~~g~Cg~C~v~v~~G~~~~ 60 (338)
T 1krh_A 13 GVTRFICIAQGETLSDAAYRQQINIPMDCREGECGTCRAFCESGNYDM 60 (338)
T ss_dssp SCEEEEEECTTCCHHHHHHHTTCCCSCSCSSSSSCTTEEEEEECCEEC
T ss_pred CCcEEEEeCCCCcHHHHHHHcCCCcccCCCCcCCCCCEEEEecCcEec
Confidence 667788889999999999999999999999999999999999998876
No 59
>3n9z_C Adrenodoxin; cytochrome P450, 22-hydroxycholesterol, cholesterol SIDE CHA cleavage, structural genomics; HET: HEM HC9; 2.17A {Homo sapiens} SCOP: d.15.4.1 PDB: 3na1_C* 3p1m_A* 1l6u_A 1l6v_A 1e6e_B* 1cje_A
Probab=96.78 E-value=4.1e-05 Score=65.71 Aligned_cols=49 Identities=14% Similarity=0.042 Sum_probs=12.3
Q ss_pred CcccccccccCchhHHHHHHHHHHHHH--hhhh-hHHHHHHHHhhhhcCCCC
Q 008159 437 PSEKVVSKEKTPSWVADLIILSSFIIA--ITGS-TLMAILLRWRRLKKQTPP 485 (575)
Q Consensus 437 ~~~~~~~~~~~~~sll~~l~~~g~~~~--~~C~-~G~C~~C~~~~~~g~v~~ 485 (575)
++..++++.+.++|||+++.++|++++ +.|+ .|.|++|++++.++..+.
T Consensus 14 ~G~~~~v~~~~G~tLl~aa~~~gi~i~g~~~CgG~g~CgtC~v~v~~~~~~~ 65 (123)
T 3n9z_C 14 DGETLTTKGKVGDSLLDVVVENNLDIDGFGACEGTLACSTCHLIFEDHIYEK 65 (123)
T ss_dssp -----------------------------CTTCSSSSCSTTBC---------
T ss_pred CCCEEEEEECCCCcHHHHHHHcCCCCCcCCCCCCCCEeCCCeeEEecccccc
Confidence 344567788899999999999999999 9998 699999999998765443
No 60
>1t3q_A Quinoline 2-oxidoreductase small subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: a.56.1.1 d.15.4.2
Probab=95.61 E-value=0.00021 Score=64.88 Aligned_cols=51 Identities=8% Similarity=-0.147 Sum_probs=44.3
Q ss_pred cccccCCcccccccccCchhHHHHHHHH-HHH-HHhhhhhHHHHHHHHhhhhcC
Q 008159 431 SEKLAAPSEKVVSKEKTPSWVADLIILS-SFI-IAITGSTLMAILLRWRRLKKQ 482 (575)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~sll~~l~~~-g~~-~~~~C~~G~C~~C~~~~~~g~ 482 (575)
.++++++++..++.+++++|||++|.+. |+. ++++|+.|.||+|.+.+ +|+
T Consensus 11 ~i~~~ing~~~~~~v~~~~tlL~~Lr~~~gl~g~~~~C~~G~CGaC~V~v-dG~ 63 (168)
T 1t3q_A 11 RISATINGKPRVFYVEPRMHLADALREVVGLTGTKIGCEQGVCGSCTILI-DGA 63 (168)
T ss_dssp EEEEEETTEEEEEEECTTSBHHHHHHHTTCCTTSCCSCSSSSSCTTEEEE-TTE
T ss_pred eEEEEECCEEEEEecCCCCcHHHHHHhcCCCCccccCCCCCCCCCcEEEE-CCC
Confidence 4678888888888888999999999996 887 88999999999999887 553
No 61
>3hrd_D Nicotinate dehydrogenase small FES subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=91.25 E-value=0.0062 Score=54.31 Aligned_cols=49 Identities=10% Similarity=-0.136 Sum_probs=40.7
Q ss_pred cccccCCcccccccccCchhHHHHHHHH-HH-HHHhhhhhHHHHHHHHhhh
Q 008159 431 SEKLAAPSEKVVSKEKTPSWVADLIILS-SF-IIAITGSTLMAILLRWRRL 479 (575)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~sll~~l~~~-g~-~~~~~C~~G~C~~C~~~~~ 479 (575)
.+++.+++...+++++++.+||++|.+. ++ ...++|+.|.||+|.+.+-
T Consensus 5 ~i~~~vNG~~~~v~v~p~~tLLd~LR~~lgltgtk~gC~~G~CGACtV~vd 55 (160)
T 3hrd_D 5 TINLNLNGEARSIVTEPNKRLLDLLREDFGLTSVKEGCSEGECGACTVIFN 55 (160)
T ss_dssp EEEEEETTEEEEEEECSSSBHHHHHHTTSCCTTSCCSSSSSSSCTTEEEET
T ss_pred eEEEEECCEEEEEecCCCCCHHHHHHHhcCCCccccccCCCCCCCCEEEEC
Confidence 3667788888888888999999999974 66 4689999999999987763
No 62
>1rm6_C 4-hydroxybenzoyl-COA reductase gamma subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: a.56.1.1 d.15.4.2 PDB: 1sb3_C*
Probab=90.84 E-value=0.0079 Score=53.93 Aligned_cols=48 Identities=4% Similarity=-0.235 Sum_probs=39.9
Q ss_pred cccccCCcccccccccCchhHHHHHHHH-HH-HHHhhhhhHHHHHHHHhh
Q 008159 431 SEKLAAPSEKVVSKEKTPSWVADLIILS-SF-IIAITGSTLMAILLRWRR 478 (575)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~sll~~l~~~-g~-~~~~~C~~G~C~~C~~~~ 478 (575)
.+++++++...+++++++.+||++|.+. ++ ....+|+.|+||+|.+.+
T Consensus 4 ~i~~~vNG~~~~v~~~~~~tLL~~Lr~~~gl~g~k~gC~~G~CGaCtV~v 53 (161)
T 1rm6_C 4 ILRLTLNGRAREDLVPDNMLLLDYLRETVGLTGTKQGCDGGECGACTVLV 53 (161)
T ss_dssp EEEEEETTEEEEEEEETTCBHHHHHHHTTCCTTSCCCSSSSSSCTTEEEE
T ss_pred eEEEEECCEEEEEecCCcCcHHHHHHHcCCCcccccCCCCCCCCCCEEEE
Confidence 3567788888877778899999999985 54 467999999999998876
No 63
>1ffv_A CUTS, iron-sulfur protein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: a.56.1.1 d.15.4.2 PDB: 1ffu_A*
Probab=90.39 E-value=0.0089 Score=53.58 Aligned_cols=48 Identities=4% Similarity=-0.142 Sum_probs=39.2
Q ss_pred cccccCCcccccccccCchhHHHHHHHH-HH-HHHhhhhhHHHHHHHHhh
Q 008159 431 SEKLAAPSEKVVSKEKTPSWVADLIILS-SF-IIAITGSTLMAILLRWRR 478 (575)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~sll~~l~~~-g~-~~~~~C~~G~C~~C~~~~ 478 (575)
.+++++++...+++++++++||++|.+. ++ ....+|+.|.||+|.+.+
T Consensus 5 ~i~~~vNG~~~~~~v~~~~tLLd~LR~~lgltg~k~gC~~G~CGaCtV~v 54 (163)
T 1ffv_A 5 IITVNVNGKAQEKAVEPRTLLIHFLREELNLTGAHIGCETSHCGACTVDI 54 (163)
T ss_dssp EEEEEETTEEEEEEECTTCBHHHHHHHTSCCTTSCCCCSSSCSCTTEEEE
T ss_pred eEEEEECCEEEEEecCCCCcHHHHHHhcCCCcccccCCCCCCCCCCEEEE
Confidence 3567788888888888999999999873 54 358999999999998776
No 64
>2bs2_B Quinol-fumarate reductase iron-sulfur subunit B; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.1.2.1 d.15.4.2 PDB: 2bs3_B* 1e7p_B* 1qlb_B* 2bs4_B*
Probab=89.45 E-value=0.01 Score=57.07 Aligned_cols=42 Identities=2% Similarity=-0.185 Sum_probs=32.8
Q ss_pred ccccccCchhHHHHHHHHHHH------HHhhhhhHHHHHHHHhhhhcCC
Q 008159 441 VVSKEKTPSWVADLIILSSFI------IAITGSTLMAILLRWRRLKKQT 483 (575)
Q Consensus 441 ~~~~~~~~~sll~~l~~~g~~------~~~~C~~G~C~~C~~~~~~g~v 483 (575)
.++++++++|+||+|..++.. ...+|+.|+||+|.+++ +|++
T Consensus 26 ~~v~~~~~~tlL~~l~~~~~~~~~~l~~~~~c~~g~Cg~C~v~i-~G~~ 73 (241)
T 2bs2_B 26 YKIEEAPSMTIFIVLNMIRETYDPDLNFDFVCRAGICGSCGMMI-NGRP 73 (241)
T ss_dssp EEEECCTTCBHHHHHHHHHHHTCTTCCCCCSSSSSSSCTTEEEE-TTEE
T ss_pred EEEeCCCCChHHHHHHHhchhcCCCCccCCCCCCCCCCCCEeEE-CCCe
Confidence 344567789999999998743 24689999999999888 6653
No 65
>1n62_A Carbon monoxide dehydrogenase small chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: a.56.1.1 d.15.4.2 PDB: 1n5w_A* 1n61_A* 1n60_A* 1n63_A* 1zxi_A*
Probab=89.37 E-value=0.012 Score=52.88 Aligned_cols=48 Identities=10% Similarity=-0.047 Sum_probs=39.2
Q ss_pred cccccCCcccccccccCchhHHHHHHHH-HHH-HHhhhhhHHHHHHHHhh
Q 008159 431 SEKLAAPSEKVVSKEKTPSWVADLIILS-SFI-IAITGSTLMAILLRWRR 478 (575)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~sll~~l~~~-g~~-~~~~C~~G~C~~C~~~~ 478 (575)
.+++++++...+++++++++||++|.+. ++. ...+|+.|.||+|.+.+
T Consensus 5 ~i~~~vNG~~~~~~v~~~~tLLd~LR~~lgl~g~k~gC~~G~CGaCtV~v 54 (166)
T 1n62_A 5 HIELTINGHPVEALVEPRTLLIHFIREQQNLTGAHIGCDTSHCGACTVDL 54 (166)
T ss_dssp EEEEEETTEEEEEEECTTCBHHHHHHHTSCCTTSCCCCSSSCSCTTEEEE
T ss_pred eEEEEECCEEEEEecCCCCcHHHHHHHcCCCCccccCCCCCCCCCCEEEE
Confidence 3567788888888888999999999873 543 47899999999998766
No 66
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=88.05 E-value=0.29 Score=48.87 Aligned_cols=37 Identities=19% Similarity=0.406 Sum_probs=29.4
Q ss_pred cCCCChHHHHHHHHhhcCCceeEEEecCccchHHHHHHHhhh
Q 008159 509 GGRPNFEEIFSELEKETAGSDIGVLVCGPESMKESVAKTSQR 550 (575)
Q Consensus 509 g~RPn~~~i~~~~~~~~~~~~vGV~~cGp~~l~~~v~~~c~~ 550 (575)
++|++..+++.+. ..+.-||+|||+.|.+.|++.+++
T Consensus 178 ~g~~~~~~ll~~~-----~~~~~vyvCGP~~m~~~v~~~l~~ 214 (321)
T 2pia_A 178 TKAFDFWSVFEKS-----KPAQHVYCCGPQALMDTVRDMTGH 214 (321)
T ss_dssp TSCCCHHHHHSSC-----CTTEEEEEESCHHHHHHHHHHTTT
T ss_pred cCccCHHHHhccc-----CCCCEEEEECCHHHHHHHHHHHHh
Confidence 4688888776542 235679999999999999999886
No 67
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor}
Probab=87.39 E-value=0.17 Score=48.15 Aligned_cols=37 Identities=22% Similarity=0.290 Sum_probs=27.3
Q ss_pred CCCChHHHHHHHHhhcCCceeEEEecCccchHHHHHHHhhhhh
Q 008159 510 GRPNFEEIFSELEKETAGSDIGVLVCGPESMKESVAKTSQRKS 552 (575)
Q Consensus 510 ~RPn~~~i~~~~~~~~~~~~vGV~~cGp~~l~~~v~~~c~~~~ 552 (575)
+|++...+ . .+..+.-||+|||+.|.+++++.+++..
T Consensus 188 g~~~~~~~--~----~~~~~~~vyvCGp~~m~~~v~~~l~~~g 224 (243)
T 4eh1_A 188 GEMQLAEL--I----LPIEDGDFYLCGPIGFMQYVVKQLLALG 224 (243)
T ss_dssp SSCCCTTS--C----CCTTTCEEEEEECHHHHHHHHHHHHHHT
T ss_pred CCccHHHe--e----ccCCCcEEEEECCHHHHHHHHHHHHHcC
Confidence 56665443 1 2235678999999999999999998743
No 68
>4g1v_A Flavohemoglobin; three domains: globin fold, antiparallel beta-barrel, alpha/ fold, RESP., FAD, oxidoreductase; HET: HEM FAD; 2.10A {Saccharomyces cerevisiae} PDB: 4g1b_A*
Probab=86.64 E-value=0.39 Score=49.50 Aligned_cols=37 Identities=11% Similarity=0.099 Sum_probs=28.3
Q ss_pred CCCChHHHHHHHHhhcCCceeEEEecCccchHHHHHHHhhhh
Q 008159 510 GRPNFEEIFSELEKETAGSDIGVLVCGPESMKESVAKTSQRK 551 (575)
Q Consensus 510 ~RPn~~~i~~~~~~~~~~~~vGV~~cGp~~l~~~v~~~c~~~ 551 (575)
+|++...+-+.+ +. +..||+|||+.|.+++++.+.+.
T Consensus 342 g~~~~~~l~~~~----~~-~~~vyvCGp~~m~~~v~~~L~~~ 378 (399)
T 4g1v_A 342 PLINAAFLKEKS----PA-HADVYTCGSLAFMQAMIGHLKEL 378 (399)
T ss_dssp CCCCHHHHHHHS----CS-SCEEEEEECHHHHHHHHHHHHHT
T ss_pred CcccHHHHHhhC----CC-CCEEEEECCHHHHHHHHHHHHHc
Confidence 688865544332 22 67899999999999999999874
No 69
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A*
Probab=86.10 E-value=0.4 Score=46.44 Aligned_cols=26 Identities=15% Similarity=0.369 Sum_probs=22.5
Q ss_pred CceeEEEecCccchHHHHHHHhhhhh
Q 008159 527 GSDIGVLVCGPESMKESVAKTSQRKS 552 (575)
Q Consensus 527 ~~~vGV~~cGp~~l~~~v~~~c~~~~ 552 (575)
..+.-||+|||++|.+++++.+.+..
T Consensus 226 ~~~~~v~vCGp~~m~~~v~~~l~~~g 251 (271)
T 4fk8_A 226 PEQDRVMLCGSTAMLKDTTELLKKAG 251 (271)
T ss_dssp TTTEEEEEEECHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcC
Confidence 35678999999999999999998744
No 70
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=85.66 E-value=0.34 Score=42.13 Aligned_cols=22 Identities=18% Similarity=0.255 Sum_probs=20.2
Q ss_pred EEEecCccchHHHHHHHhhhhh
Q 008159 531 GVLVCGPESMKESVAKTSQRKS 552 (575)
Q Consensus 531 GV~~cGp~~l~~~v~~~c~~~~ 552 (575)
-||+|||+.|.+.|++.+++.+
T Consensus 110 ~vy~CGP~~Mm~av~~~l~~~~ 131 (142)
T 3lyu_A 110 LVFMVGPVGDQKQVFEVVKEYG 131 (142)
T ss_dssp EEEEESCHHHHHHHHHHHHHHT
T ss_pred EEEEECCHHHHHHHHHHHHHcC
Confidence 4899999999999999999865
No 71
>2wdq_B Succinate dehydrogenase iron-sulfur subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_B* 2acz_B* 1nek_B* 2wdr_B* 2wdv_B* 2ws3_B* 2wu2_B* 2wu5_B* 2wp9_B*
Probab=84.86 E-value=0.032 Score=53.47 Aligned_cols=41 Identities=5% Similarity=-0.165 Sum_probs=31.8
Q ss_pred ccccccC--chhHHHHHHHHHH-----HHHhhhhhHHHHHHHHhhhhcC
Q 008159 441 VVSKEKT--PSWVADLIILSSF-----IIAITGSTLMAILLRWRRLKKQ 482 (575)
Q Consensus 441 ~~~~~~~--~~sll~~l~~~g~-----~~~~~C~~G~C~~C~~~~~~g~ 482 (575)
.++++++ +.|+||+|...+. ....+|+.|+||+|.+.+ +|+
T Consensus 23 ~~v~~~~~~~~tll~~l~~~~~~~~~l~~~~~C~~g~Cg~C~v~v-~G~ 70 (238)
T 2wdq_B 23 YTLEADEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSDGLNM-NGK 70 (238)
T ss_dssp EEEECCTTCCCBHHHHHHHHHHHCTTCCCCCSSSSSSSCTTEEEE-TTE
T ss_pred EEeecCCCCCChHHHHHHHhcccCCCccccccCCCCCCCCCEEEE-CCE
Confidence 3445666 8899999999983 445799999999998776 443
No 72
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1
Probab=84.76 E-value=0.38 Score=45.28 Aligned_cols=23 Identities=9% Similarity=0.150 Sum_probs=19.7
Q ss_pred ceeEEEecCccchHHHHHHHh-hh
Q 008159 528 SDIGVLVCGPESMKESVAKTS-QR 550 (575)
Q Consensus 528 ~~vGV~~cGp~~l~~~v~~~c-~~ 550 (575)
.+.-||+|||+.|.+++++.+ .+
T Consensus 193 ~~~~vyvCGp~~m~~~v~~~l~~~ 216 (232)
T 1qfj_A 193 AEHDIYIAGRFEMAKIARDLFCSE 216 (232)
T ss_dssp TTCEEEEESCHHHHHHHHHHHHHH
T ss_pred cccEEEEECCHHHHHHHHHHHHHH
Confidence 345699999999999999987 65
No 73
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2
Probab=83.78 E-value=0.53 Score=44.92 Aligned_cols=23 Identities=17% Similarity=0.576 Sum_probs=20.3
Q ss_pred eeEEEecCccchHHHHHHHhhhh
Q 008159 529 DIGVLVCGPESMKESVAKTSQRK 551 (575)
Q Consensus 529 ~vGV~~cGp~~l~~~v~~~c~~~ 551 (575)
+.-||+|||+.|.+++++.+++.
T Consensus 210 ~~~vyvCGp~~m~~~v~~~l~~~ 232 (250)
T 1tvc_A 210 NPDIYLCGPPGMIDAACELVRSR 232 (250)
T ss_dssp SSEEEEESSHHHHHHHHHHHHHH
T ss_pred CcEEEEeCCHHHHHHHHHHHHHc
Confidence 45699999999999999999873
No 74
>1kf6_B Fumarate reductase iron-sulfur protein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.1.2.1 d.15.4.2 PDB: 1kfy_B* 1l0v_B* 2b76_B* 3cir_B* 3p4p_B* 3p4q_B* 3p4r_B* 3p4s_B*
Probab=83.68 E-value=0.03 Score=53.85 Aligned_cols=41 Identities=2% Similarity=-0.247 Sum_probs=33.0
Q ss_pred ccccccCchhHHHHHHHHHHH------HHhhhhhHHHHHHHHhhhhcC
Q 008159 441 VVSKEKTPSWVADLIILSSFI------IAITGSTLMAILLRWRRLKKQ 482 (575)
Q Consensus 441 ~~~~~~~~~sll~~l~~~g~~------~~~~C~~G~C~~C~~~~~~g~ 482 (575)
.++++++++|+||+|..+|+. ...+|+.|+||+|.+.+ +|+
T Consensus 26 ~~~~~~~~~tll~al~~~~~~~~p~l~~~~~c~~G~Cg~C~v~v-~G~ 72 (243)
T 1kf6_B 26 YEVPYDATTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGMMV-NNV 72 (243)
T ss_dssp EEEEECTTCBHHHHHHHHHHHTCTTCCCCCCCSSSSSCCCEEEE-TTE
T ss_pred EEEecCCCChHHHHHHHcCcccCCCcccccCCCCCcCCCCEeEE-CCE
Confidence 445667889999999999965 35699999999998874 554
No 75
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=81.66 E-value=0.042 Score=62.14 Aligned_cols=46 Identities=7% Similarity=-0.013 Sum_probs=39.5
Q ss_pred ccccCCcccccccccCchhHHHHHHHHHHHHHhhh------hhHHHHHHHHhhh
Q 008159 432 EKLAAPSEKVVSKEKTPSWVADLIILSSFIIAITG------STLMAILLRWRRL 479 (575)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~sll~~l~~~g~~~~~~C------~~G~C~~C~~~~~ 479 (575)
+++++++ ++++++.++|+|++++++|+.+|..| ..|.|+.|.+++.
T Consensus 2 v~i~idg--~~~~v~~g~til~a~~~~gi~ip~~C~~~~~~~~G~C~~C~V~v~ 53 (783)
T 3i9v_3 2 VRVKVND--RIVEVPPGTSVMDAVFHAGYDVPLFCSEKHLSPIGACRMCLVRIG 53 (783)
T ss_dssp EEEECSS--CEEEECTTCBHHHHHHHTTCCCCCSSCCTTSCCCCCSCCSEEEEE
T ss_pred eEEEECC--EEEEeCCCChHHHHHHHhCCCccccCCCCCCCCCcccCCcEEEec
Confidence 3455655 56778899999999999999999999 8999999999984
No 76
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=80.77 E-value=0.71 Score=40.84 Aligned_cols=22 Identities=18% Similarity=0.255 Sum_probs=19.6
Q ss_pred EEEecCccchHHHHHHHhhhhh
Q 008159 531 GVLVCGPESMKESVAKTSQRKS 552 (575)
Q Consensus 531 GV~~cGp~~l~~~v~~~c~~~~ 552 (575)
-||+|||+.|.+.+++.+.+..
T Consensus 115 ~vy~CGP~~mm~~v~~~l~~~G 136 (158)
T 3lrx_A 115 LVFMVGPVGDQKQVFEVVKEYG 136 (158)
T ss_dssp EEEEESCHHHHHHHHHHHGGGT
T ss_pred EEEEECCHHHHHHHHHHHHHcC
Confidence 5899999999999999998743
No 77
>3jqq_A Ferredoxin NADP reductase; FAD, oxidoreductase; HET: FAD A2P; 2.20A {Plasmodium falciparum} PDB: 2ok8_A* 2ok7_A* 3jqr_A* 3jqp_A*
Probab=79.38 E-value=0.69 Score=46.04 Aligned_cols=24 Identities=17% Similarity=0.383 Sum_probs=21.0
Q ss_pred ceeEEEecCccchHHHHHHHhhhh
Q 008159 528 SDIGVLVCGPESMKESVAKTSQRK 551 (575)
Q Consensus 528 ~~vGV~~cGp~~l~~~v~~~c~~~ 551 (575)
.+..||+|||+.|.+++++++.+.
T Consensus 277 ~~~~vyvCGP~~m~~~v~~~l~~~ 300 (316)
T 3jqq_A 277 YKCELYICGKKSIRYKVMDILKSH 300 (316)
T ss_dssp TCCEEEEEECSTHHHHHHHHHHC-
T ss_pred CCeEEEEeCCHHHHHHHHHHHHHc
Confidence 357899999999999999999873
No 78
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis}
Probab=78.95 E-value=0.94 Score=44.16 Aligned_cols=24 Identities=29% Similarity=0.541 Sum_probs=21.0
Q ss_pred ceeEEEecCccchHHHHHHHhhhh
Q 008159 528 SDIGVLVCGPESMKESVAKTSQRK 551 (575)
Q Consensus 528 ~~vGV~~cGp~~l~~~v~~~c~~~ 551 (575)
.+.-||+|||+.|.++|++.+.+.
T Consensus 254 ~~~~vyvCGp~~m~~~v~~~l~~~ 277 (290)
T 2r6h_A 254 EDIEYYMCGPGPMANAVKGMLENL 277 (290)
T ss_dssp GGEEEEEECCHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCHHHHHHHHHHHHHc
Confidence 456799999999999999999873
No 79
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=78.85 E-value=0.95 Score=44.73 Aligned_cols=44 Identities=18% Similarity=0.388 Sum_probs=27.8
Q ss_pred cCCCChHHHHHHHHhhc---CCceeEEEecCccchHHHHHHHhhhhh
Q 008159 509 GGRPNFEEIFSELEKET---AGSDIGVLVCGPESMKESVAKTSQRKS 552 (575)
Q Consensus 509 g~RPn~~~i~~~~~~~~---~~~~vGV~~cGp~~l~~~v~~~c~~~~ 552 (575)
|++....+.+.+..++. ...+.-||+|||+.|.++|++.+.+..
T Consensus 240 g~~~~v~~~l~~~~~~~~~~~~~~~~vyvCGp~~m~~~v~~~L~~~~ 286 (311)
T 3lo8_A 240 GGKMYVQDKIEEYSDEIFKLLDGGAHIYFCGLKGMMPGIQDTLKKVA 286 (311)
T ss_dssp ---CCHHHHHHHTHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHH
T ss_pred CCcceehHHHHHHHHHHHHhhcCCcEEEEECCHHHHHHHHHHHHHHH
Confidence 34555566655432221 023577999999999999988888743
No 80
>3nvw_A Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, guanine, oxidoredu; HET: FAD MTE GUN; 1.60A {Bos taurus} PDB: 3etr_A* 3ns1_A* 3nvv_A* 3nrz_A* 3nvy_A* 3nvz_A* 3rca_A* 3sr6_A* 3eub_A*
Probab=78.23 E-value=0.11 Score=46.37 Aligned_cols=49 Identities=4% Similarity=-0.187 Sum_probs=39.0
Q ss_pred cccccCCcccc-cccccCchhHHHHHHHH-HH-HHHhhhhhHHHHHHHHhhh
Q 008159 431 SEKLAAPSEKV-VSKEKTPSWVADLIILS-SF-IIAITGSTLMAILLRWRRL 479 (575)
Q Consensus 431 ~~~~~~~~~~~-~~~~~~~~sll~~l~~~-g~-~~~~~C~~G~C~~C~~~~~ 479 (575)
.+++.+++... ...++++.+||+.|.+. ++ -+..+|+.|.||+|.+-+-
T Consensus 4 ~i~~~vNG~~~~~~~~~p~~~Ll~~LR~~lgltGtK~GC~~G~CGACTVlvd 55 (164)
T 3nvw_A 4 ELVFFVNGKKVVEKNADPETTLLAYLRRKLGLRGTKLGCGEGGCGACTVMLS 55 (164)
T ss_dssp CEEEEETTEEEEETTCCTTCBHHHHHHHTSCCTTSCCSCSSSSSCTTEEEEE
T ss_pred eEEEEECCEEEEEecCCCCCCHHHHHHHHcCCCCcCCCcCCCCCCCCEEEEc
Confidence 46777888774 56788899999999874 54 4579999999999987654
No 81
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=77.73 E-value=0.14 Score=53.96 Aligned_cols=47 Identities=4% Similarity=-0.205 Sum_probs=38.7
Q ss_pred ccccCCcccccc-cccCchhHHHHHHHHHHH-HHhhhhhHHHHHHHHhh
Q 008159 432 EKLAAPSEKVVS-KEKTPSWVADLIILSSFI-IAITGSTLMAILLRWRR 478 (575)
Q Consensus 432 ~~~~~~~~~~~~-~~~~~~sll~~l~~~g~~-~~~~C~~G~C~~C~~~~ 478 (575)
+++++++...++ .++++.+||+.|...++. ...+|+.|.||+|.+.+
T Consensus 3 ~~~~vNg~~~~~~~~~~~~~Ll~~Lr~~~l~g~k~gC~~G~CGaCtV~v 51 (462)
T 2w3s_A 3 IAFLLNGETRRVRIEDPTQSLLEWLRAEGLTGTKEGCNEGDCGACTVMI 51 (462)
T ss_dssp EEEEETTEEEEEECSCTTCBHHHHHHHTTCTTSCCSCSSSSSCTTEEEE
T ss_pred EEEEECCEEEEEecCCCCCcHHHHHHHcCCCccCCCCCCCCcCCcEEEE
Confidence 456778888887 778889999999955654 57999999999998877
No 82
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A*
Probab=77.67 E-value=1.1 Score=44.26 Aligned_cols=27 Identities=15% Similarity=0.311 Sum_probs=22.2
Q ss_pred CCceeEEEecCccchHHHHHHHhhhhh
Q 008159 526 AGSDIGVLVCGPESMKESVAKTSQRKS 552 (575)
Q Consensus 526 ~~~~vGV~~cGp~~l~~~v~~~c~~~~ 552 (575)
...+..||+|||+.|.++|++++.+..
T Consensus 259 ~~~~~~vyvCGp~~M~~~v~~~L~~~~ 285 (310)
T 3vo2_A 259 KKDNTYVYMCGLKGMEKGIDDIMLNLA 285 (310)
T ss_dssp TSTTEEEEEEESTTHHHHHHHHHHHHH
T ss_pred ccCCcEEEEeCCHHHHHHHHHHHHHHH
Confidence 335788999999999999998888643
No 83
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5
Probab=76.80 E-value=1.2 Score=45.55 Aligned_cols=23 Identities=22% Similarity=0.382 Sum_probs=20.2
Q ss_pred eeEEEecCccchHHHHHHHhhhh
Q 008159 529 DIGVLVCGPESMKESVAKTSQRK 551 (575)
Q Consensus 529 ~vGV~~cGp~~l~~~v~~~c~~~ 551 (575)
+.-||+|||+.|.++|++.+.+.
T Consensus 356 ~~~vyvCGp~~m~~~v~~~L~~~ 378 (396)
T 1gvh_A 356 TMQFYLCGPVGFMQFTAKQLVDL 378 (396)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCHHHHHHHHHHHHHc
Confidence 45699999999999999999873
No 84
>1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet, helix-FLA five-stranded parallel beta sheet, lipid binding protein; HET: HEM FAD DGG; 1.75A {Cupriavidus necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 PDB: 3ozu_A* 3ozv_B* 3ozw_A*
Probab=75.52 E-value=1.5 Score=45.08 Aligned_cols=39 Identities=15% Similarity=0.241 Sum_probs=26.5
Q ss_pred cCCCChHHHHHHHHhhcCCceeEEEecCccchHHHHHHHhhhh
Q 008159 509 GGRPNFEEIFSELEKETAGSDIGVLVCGPESMKESVAKTSQRK 551 (575)
Q Consensus 509 g~RPn~~~i~~~~~~~~~~~~vGV~~cGp~~l~~~v~~~c~~~ 551 (575)
.+|.+...+ .+.. ..+ +.-||+|||+.|.++|++.+.+.
T Consensus 346 ~G~i~~~~l-~~~~-~~~--~~~vyvCGp~~m~~~v~~~L~~~ 384 (403)
T 1cqx_A 346 PGLVDVKQI-EKSI-LLP--DADYYICGPIPFMRMQHDALKNL 384 (403)
T ss_dssp ESSCCGGGS-HHHH-CCT--TCEEEEESSHHHHHHHHHHHHHT
T ss_pred CCCcCHHHH-hhcc-CCC--CCEEEEeCCHHHHHHHHHHHHHc
Confidence 367775432 2211 122 45689999999999999999873
No 85
>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A*
Probab=74.36 E-value=1.5 Score=42.40 Aligned_cols=24 Identities=21% Similarity=0.317 Sum_probs=20.9
Q ss_pred ceeEEEecCccchHHHHHHHhhhh
Q 008159 528 SDIGVLVCGPESMKESVAKTSQRK 551 (575)
Q Consensus 528 ~~vGV~~cGp~~l~~~v~~~c~~~ 551 (575)
.+.-||+|||+.|.++|++.+.+.
T Consensus 225 ~~~~vyvCGp~~m~~~v~~~l~~~ 248 (272)
T 2bgi_A 225 ETDRAMVCGSLAFNVDVMKVLESY 248 (272)
T ss_dssp TTEEEEEEECHHHHHHHHHHHHTT
T ss_pred CCcEEEEECCHHHHHHHHHHHHHc
Confidence 456799999999999999999873
No 86
>2gpj_A Siderophore-interacting protein; structural genomics, joint for structural genomics, JCSG; HET: FAD; 2.20A {Shewanella putrefaciens}
Probab=73.49 E-value=1.6 Score=41.79 Aligned_cols=22 Identities=5% Similarity=0.045 Sum_probs=19.6
Q ss_pred ceeEEEecCccchHHHHHHHhh
Q 008159 528 SDIGVLVCGPESMKESVAKTSQ 549 (575)
Q Consensus 528 ~~vGV~~cGp~~l~~~v~~~c~ 549 (575)
...-||+|||+.|.+.+++.++
T Consensus 190 ~~~~vy~CGP~~m~~av~~~l~ 211 (252)
T 2gpj_A 190 GEPAVWIACEFNSMRALRRHFK 211 (252)
T ss_dssp SCEEEEEEEEHHHHHHHHHHHH
T ss_pred CCcEEEEEcCHHHHHHHHHHHH
Confidence 3556999999999999999987
No 87
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum}
Probab=70.42 E-value=2.9 Score=39.40 Aligned_cols=24 Identities=33% Similarity=0.641 Sum_probs=21.2
Q ss_pred ceeEEEecCccchHHHHHHHhhhh
Q 008159 528 SDIGVLVCGPESMKESVAKTSQRK 551 (575)
Q Consensus 528 ~~vGV~~cGp~~l~~~v~~~c~~~ 551 (575)
.+.-||+|||+.|.+++++.+++.
T Consensus 210 ~~~~vy~CGp~~m~~~v~~~l~~~ 233 (243)
T 2eix_A 210 SDIKVMMCGPPMMNKAMQGHLETL 233 (243)
T ss_dssp SSEEEEEESSHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCHHHHHHHHHHHHHc
Confidence 457799999999999999999874
No 88
>2bmw_A Ferredoxin--NADP reductase; oxidoreductase, flavoprotein, FAD, FNR, reductase reductase, phycobilisome, thylakoid; HET: FAD; 1.5A {Anabaena SP} SCOP: b.43.4.2 c.25.1.1 PDB: 1h42_A* 2vyq_A* 2vzl_A* 1ogi_A* 1ogj_A* 1gjr_A* 1e62_A* 1e64_A* 1quf_A* 1e63_A* 1go2_A* 1w34_A* 1b2r_A* 1w35_A* 1w87_A* 1que_A* 1ewy_A* 1gr1_A* 2bsa_A* 1bqe_A* ...
Probab=70.19 E-value=3.3 Score=40.57 Aligned_cols=23 Identities=22% Similarity=0.543 Sum_probs=18.4
Q ss_pred ceeEEEecCccchHHHHHHHhhh
Q 008159 528 SDIGVLVCGPESMKESVAKTSQR 550 (575)
Q Consensus 528 ~~vGV~~cGp~~l~~~v~~~c~~ 550 (575)
.+.-||+|||+.|.++|++...+
T Consensus 255 ~~~~vyvCGp~~m~~~v~~~l~~ 277 (304)
T 2bmw_A 255 QKTHTYICGPPPMEEGIDAALSA 277 (304)
T ss_dssp TTEEEEEEECTTHHHHHHHHHHH
T ss_pred CCcEEEEECCHHHHHHHHHHHHH
Confidence 35569999999999988776654
No 89
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A*
Probab=69.34 E-value=2.6 Score=39.83 Aligned_cols=24 Identities=17% Similarity=0.383 Sum_probs=20.8
Q ss_pred ceeEEEecCccchHHHHHHHh-hhh
Q 008159 528 SDIGVLVCGPESMKESVAKTS-QRK 551 (575)
Q Consensus 528 ~~vGV~~cGp~~l~~~v~~~c-~~~ 551 (575)
.+.-||+|||+.|.++|++.+ .+.
T Consensus 205 ~~~~vy~CGp~~m~~~v~~~l~~~~ 229 (248)
T 1fdr_A 205 ETSHVMLCGNPQMVRDTQQLLKETR 229 (248)
T ss_dssp TTEEEEEEECHHHHHHHHHHHHHHH
T ss_pred cCCEEEEeCCHHHHHHHHHHHHHHc
Confidence 456799999999999999998 663
No 90
>2h88_B Succinate dehydrogenase IP subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_B* 1yq3_B* 2fbw_B* 2h89_B* 2wqy_B* 3aef_B* 3abv_B* 3ae1_B* 3ae3_B* 3ae2_B* 3ae5_B* 3ae6_B* 3ae7_B* 3ae8_B* 3ae9_B* 3aea_B* 3aeb_B* 3aec_B* 3aed_B* 3aee_B* ...
Probab=69.20 E-value=0.3 Score=47.01 Aligned_cols=39 Identities=8% Similarity=-0.169 Sum_probs=29.8
Q ss_pred ccccC-chhHHHHHHHHHHH------HHhhhhhHHHHHHHHhhhhcC
Q 008159 443 SKEKT-PSWVADLIILSSFI------IAITGSTLMAILLRWRRLKKQ 482 (575)
Q Consensus 443 ~~~~~-~~sll~~l~~~g~~------~~~~C~~G~C~~C~~~~~~g~ 482 (575)
+++++ +.|+||+|...+.. ...+|+.|+||+|.+.+ +|+
T Consensus 35 v~~~~~~~tlLd~l~~~~~~~~p~l~~~~~c~~g~Cg~C~v~i-~G~ 80 (252)
T 2h88_B 35 VDLNKCGPMVLDALIKIKNELDSTLTFRRSCREGICGSCAMNI-AGG 80 (252)
T ss_dssp EEGGGSCSBHHHHHHHHHHHTCTTCCCCCSCSSSSSCTTEEEE-TTE
T ss_pred EecCCCCChHHHHHHHhCcccCCCccccCCCCCCCCCCCEEEE-CCc
Confidence 34455 78999999998842 24589999999998874 454
No 91
>2qdx_A Ferredoxin reductase; oxidoreductase; HET: FAD; 1.55A {Pseudomonas aeruginosa} PDB: 3crz_A* 1a8p_A*
Probab=68.78 E-value=2.7 Score=40.02 Aligned_cols=24 Identities=25% Similarity=0.394 Sum_probs=20.8
Q ss_pred ceeEEEecCccchHHHHHHHhhhh
Q 008159 528 SDIGVLVCGPESMKESVAKTSQRK 551 (575)
Q Consensus 528 ~~vGV~~cGp~~l~~~v~~~c~~~ 551 (575)
.+.-||+|||+.|.++|++.+.+.
T Consensus 211 ~~~~vyvCGp~~m~~~v~~~l~~~ 234 (257)
T 2qdx_A 211 QDDRAMICGSPSMLEETSAVLDSF 234 (257)
T ss_dssp TTEEEEEEECHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCHHHHHHHHHHHHHc
Confidence 356799999999999999999873
No 92
>3vr8_B Iron-sulfur subunit of succinate dehydrogenase; membrane protein, reductase, mitochondria MEMB oxidoreductase; HET: FAD HEM RQX EPH; 2.81A {Ascaris suum} PDB: 3vrb_B*
Probab=67.59 E-value=0.31 Score=47.66 Aligned_cols=36 Identities=8% Similarity=-0.134 Sum_probs=27.1
Q ss_pred ccccC-chhHHHHHHHHHH------HHHhhhhhHHHHHHHHhh
Q 008159 443 SKEKT-PSWVADLIILSSF------IIAITGSTLMAILLRWRR 478 (575)
Q Consensus 443 ~~~~~-~~sll~~l~~~g~------~~~~~C~~G~C~~C~~~~ 478 (575)
+.+++ +.++||+|...+. ....+|+.|+||+|.+.+
T Consensus 59 v~v~~~~~tlLdaL~~i~~~~~ptl~~~~~C~~G~CGsC~V~I 101 (282)
T 3vr8_B 59 VDLDKCGTMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNI 101 (282)
T ss_pred EEeCCCCCcHHHHHHhcCcccCCceeecCCCCCCCCCCCEEEE
Confidence 34455 7899999997553 335789999999997754
No 93
>1dgj_A Aldehyde oxidoreductase; beta half-barrel, four-helix bundle, beta barrel; HET: MCN; 2.80A {Desulfovibrio desulfuricans} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1
Probab=67.42 E-value=0.33 Score=55.57 Aligned_cols=47 Identities=4% Similarity=-0.127 Sum_probs=38.7
Q ss_pred ccccCCcccccccccCchhHHHHHHHH-HH-HHHhhhhhHHHHHHHHhh
Q 008159 432 EKLAAPSEKVVSKEKTPSWVADLIILS-SF-IIAITGSTLMAILLRWRR 478 (575)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~sll~~l~~~-g~-~~~~~C~~G~C~~C~~~~ 478 (575)
+++++++...++.++++.+||++|.+. ++ -...+|+.|.||+|.+.+
T Consensus 4 ~~~~~ng~~~~~~~~~~~~ll~~Lr~~~~l~g~k~gC~~G~CGaCtv~v 52 (907)
T 1dgj_A 4 KTLIVNGMARRLLVSPNDLLVDVLRSQLQLTSVKVGCGKGQCGACTVIL 52 (907)
T ss_dssp EECEETTBCCEEEECTTCBHHHHHHHTTCCTTSCCSSSSSSSCTTEEEE
T ss_pred EEEEECCEEEEEecCCCCcHHHHHHHhcCCCccCCCCCCCCcCceEEEE
Confidence 567778888888888899999999973 55 457999999999997665
No 94
>1vlb_A Aldehyde oxidoreductase; iron-sulphur cluster; HET: PCD; 1.28A {Desulfovibrio gigas} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1 PDB: 1sij_A* 1zcs_A* 3fah_A* 3fc4_A* 3l4p_A*
Probab=67.40 E-value=0.31 Score=55.81 Aligned_cols=47 Identities=2% Similarity=-0.150 Sum_probs=38.7
Q ss_pred ccccCCcccccccccCchhHHHHHHH-HHH-HHHhhhhhHHHHHHHHhh
Q 008159 432 EKLAAPSEKVVSKEKTPSWVADLIIL-SSF-IIAITGSTLMAILLRWRR 478 (575)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~sll~~l~~-~g~-~~~~~C~~G~C~~C~~~~ 478 (575)
+++.+++...+++++++.+||++|.+ .++ -...+|+.|.||+|.+.+
T Consensus 4 ~~~~~ng~~~~~~~~~~~~ll~~Lr~~~~l~g~k~gC~~g~CGaCtv~v 52 (907)
T 1vlb_A 4 KVITVNGIEQNLFVDAEALLSDVLRQQLGLTGVKVGCEQGQCGACSVIL 52 (907)
T ss_dssp EEEEETTEEEEEEECTTSBHHHHHHHTTCCTTSCCSSSSSSSCTTEEEE
T ss_pred EEEEECCEEEEEecCCCChHHHHHHHhcCCCeecCCCCCCCcCccEEEE
Confidence 56777888888888889999999997 354 457999999999997765
No 95
>2b5o_A FNR, ferredoxin--NADP reductase; complex with FAD, oxidoreductase; HET: FAD; 2.50A {Synechococcus SP}
Probab=66.54 E-value=4.4 Score=41.63 Aligned_cols=23 Identities=22% Similarity=0.473 Sum_probs=19.9
Q ss_pred eeEEEecCccchHHHHHHHhhhh
Q 008159 529 DIGVLVCGPESMKESVAKTSQRK 551 (575)
Q Consensus 529 ~vGV~~cGp~~l~~~v~~~c~~~ 551 (575)
+--||+|||+.|.++|++++.+.
T Consensus 354 ~~~vyvCGP~~M~~~v~~~L~~~ 376 (402)
T 2b5o_A 354 NTHVYMCGLKGMQPPIDETFTAE 376 (402)
T ss_dssp TEEEEEEECGGGHHHHHHHHHHH
T ss_pred CcEEEEECCHHHHHHHHHHHHHH
Confidence 56699999999999999988763
No 96
>3c8y_A Iron hydrogenase 1; dithiomethylether, H-cluster, iron-sulfur binding, oxidoreductase; HET: HCN; 1.39A {Clostridium pasteurianum} SCOP: c.96.1.1 d.15.4.2 d.58.1.5 PDB: 1c4c_A* 1c4a_A* 1feh_A*
Probab=64.54 E-value=0.17 Score=55.00 Aligned_cols=45 Identities=4% Similarity=-0.148 Sum_probs=36.4
Q ss_pred cccCCcccccccccCchhHHHHHHHHHHHHHhhhh-------hHHHHHHHHhhh
Q 008159 433 KLAAPSEKVVSKEKTPSWVADLIILSSFIIAITGS-------TLMAILLRWRRL 479 (575)
Q Consensus 433 ~~~~~~~~~~~~~~~~~sll~~l~~~g~~~~~~C~-------~G~C~~C~~~~~ 479 (575)
++++++ +.+++++++|+|+++..+|+.+|..|. .|.|+.|.+.+.
T Consensus 3 ~~~ing--~~v~v~~g~tiL~a~~~~gi~ip~lC~~~~~~~~~G~Cg~C~V~v~ 54 (574)
T 3c8y_A 3 TIIING--VQFNTDEDTTILKFARDNNIDISALCFLNNCNNDINKCEICTVEVE 54 (574)
T ss_dssp EEEETT--EEEEECCCCBHHHHHHHTTCCCCCSSCBTTBCCSSSCCCTTEEEET
T ss_pred EEEECC--EEEEeCCCCHHHHHHHHcCCCCCcccCCCCCCCCcccCCCCEEEeC
Confidence 344444 455678899999999999999998887 899999988763
No 97
>1fnb_A Ferredoxin-NADP+ reductase; oxidoreductase (NADP+(A),ferredoxin(A)); HET: FAD; 1.70A {Spinacia oleracea} SCOP: b.43.4.2 c.25.1.1 PDB: 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 1qg0_A* 1qga_A* 1qfz_A* 1qfy_A* 1gaw_A* 1gaq_A* 3mhp_A* 1sm4_A* 2xnc_A*
Probab=63.74 E-value=4.6 Score=39.73 Aligned_cols=23 Identities=17% Similarity=0.395 Sum_probs=19.1
Q ss_pred ceeEEEecCccchHHHHHHHhhh
Q 008159 528 SDIGVLVCGPESMKESVAKTSQR 550 (575)
Q Consensus 528 ~~vGV~~cGp~~l~~~v~~~c~~ 550 (575)
.+--||+|||+.|.++|++...+
T Consensus 265 ~~~~vyvCGp~~m~~~v~~~L~~ 287 (314)
T 1fnb_A 265 DNTYVYMCGLKGMEKGIDDIMVS 287 (314)
T ss_dssp TTEEEEEEECTTHHHHHHHHHHH
T ss_pred CCeEEEEECCHHHHHHHHHHHHH
Confidence 35669999999999999877666
No 98
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=54.03 E-value=8.5 Score=38.69 Aligned_cols=26 Identities=31% Similarity=0.606 Sum_probs=22.7
Q ss_pred CeEEEEEeCCC--hhhHHHHHHHHHHhh
Q 008159 284 DSLLLVAGGIG--ITPFLSILQEIASAQ 309 (575)
Q Consensus 284 ~~vvlIagGiG--ITP~lsil~~l~~~~ 309 (575)
+++++.|||+| |.|.++++++|.+++
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~g 30 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQARG 30 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTT
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhCC
Confidence 57899999997 899999999998753
No 99
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A*
Probab=48.18 E-value=5.3 Score=38.30 Aligned_cols=23 Identities=26% Similarity=0.488 Sum_probs=19.5
Q ss_pred ceeEEEecCccchHH-HHHHHhhh
Q 008159 528 SDIGVLVCGPESMKE-SVAKTSQR 550 (575)
Q Consensus 528 ~~vGV~~cGp~~l~~-~v~~~c~~ 550 (575)
.+.-||+|||+.|.+ ++++...+
T Consensus 241 ~~~~vyvCGp~~m~~~~v~~~L~~ 264 (275)
T 1umk_A 241 EEPLVLMCGPPPMIQYACLPNLDH 264 (275)
T ss_dssp GCCEEEEESCHHHHHHTTHHHHHH
T ss_pred CCeEEEEECCHHHHHHHHHHHHHH
Confidence 356799999999999 88888876
No 100
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=48.08 E-value=7.1 Score=37.23 Aligned_cols=33 Identities=21% Similarity=0.338 Sum_probs=23.3
Q ss_pred ChHHHHHHHHhhcCCceeEEEecCccchHHHHHHHhhh
Q 008159 513 NFEEIFSELEKETAGSDIGVLVCGPESMKESVAKTSQR 550 (575)
Q Consensus 513 n~~~i~~~~~~~~~~~~vGV~~cGp~~l~~~v~~~c~~ 550 (575)
...+++++. .+. .--||+|||+.|.+++++ +++
T Consensus 179 ~v~~~l~~~---~~~-~~~vyvCGp~~m~~~v~~-l~~ 211 (262)
T 1ep3_B 179 HVGMLMNEI---DFE-VDALYTCGAPAMLKAVAK-KYD 211 (262)
T ss_dssp CHHHHHHHC---CSC-CSEEEEESCHHHHHHHHH-HTT
T ss_pred ehHHHHHhh---ccC-CCEEEEECCHHHHHHHHH-HHh
Confidence 345555543 122 346999999999999999 776
No 101
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidore; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4
Probab=47.96 E-value=6.4 Score=40.86 Aligned_cols=39 Identities=18% Similarity=0.187 Sum_probs=28.3
Q ss_pred ceeEEEEEEecC-----CeEEEEEecC--CCCcccCCeEEEEEeCC
Q 008159 173 ETCILSARVFPS-----KAIELILPKH--AGLKFTPTSVIFMKIPS 211 (575)
Q Consensus 173 ~~~v~~~~~~~~-----~~~~l~~~~~--~~~~~~pGQ~v~l~~p~ 211 (575)
.+.+++.+.+++ ++..+++..+ .+..|+||.++-|....
T Consensus 32 ~a~v~~~~~l~~~~~~~~~~hiel~~~~~~~~~Y~~GD~l~V~p~N 77 (435)
T 1f20_A 32 AARLLSRQNLQSPKSSRSTIFVRLHTNGNQELQYQPGDHLGVFPGN 77 (435)
T ss_dssp EEEEEEEEECSCTTCSSCEEEEEEECTTCGGGCCCTTCEEEECCCC
T ss_pred EEEEEeEEECCCCCCCceEEEEEEECCCCCCCcCCCCCEEEEEecC
Confidence 356777777753 4677777653 35899999999998643
No 102
>3a1f_A Cytochrome B-245 heavy chain; GP91(PHOX), NADPH binding domain, oxidoreductase; 2.00A {Homo sapiens}
Probab=45.22 E-value=10 Score=33.59 Aligned_cols=22 Identities=14% Similarity=0.045 Sum_probs=18.8
Q ss_pred CceeEEecCCchHHHHHHHHHHHH
Q 008159 386 QSNYAVNGLESLIWMAALVGITSI 409 (575)
Q Consensus 386 ~~~~~vcGp~~~~~~~~v~~~~~~ 409 (575)
...+|+|||.+ |++++++.+..
T Consensus 147 ~~~v~~CGP~~--m~~~v~~~l~~ 168 (186)
T 3a1f_A 147 RIGVFLCGPEA--LAETLSKQSIS 168 (186)
T ss_dssp EEEEEEESCHH--HHHHHHHHHHH
T ss_pred cEEEEEeCCHH--HHHHHHHHHHH
Confidence 46789999999 99999988766
No 103
>2rc5_A Ferredoxin-NADP reductase; FAD, oxidoreductase; HET: FAD; 2.43A {Leptospira interrogans} PDB: 2rc6_A*
Probab=42.18 E-value=18 Score=35.33 Aligned_cols=20 Identities=30% Similarity=0.713 Sum_probs=18.0
Q ss_pred EEec-CccchHHHHHHHhhhh
Q 008159 532 VLVC-GPESMKESVAKTSQRK 551 (575)
Q Consensus 532 V~~c-Gp~~l~~~v~~~c~~~ 551 (575)
+|+| ||+.|.++|++...+.
T Consensus 269 ~yvCGGp~~m~~~v~~~L~~~ 289 (314)
T 2rc5_A 269 FYICGGPKGMEKGVIEEIQKI 289 (314)
T ss_dssp EEEEESSTTTHHHHHHHHHHH
T ss_pred EEEeCCcHHHHHHHHHHHHHH
Confidence 5999 9999999999998873
No 104
>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} SCOP: b.43.4.1 c.25.1.4 PDB: 1ddi_A*
Probab=38.56 E-value=12 Score=37.91 Aligned_cols=38 Identities=8% Similarity=0.186 Sum_probs=28.1
Q ss_pred eeEEEEEEecC-----CeEEEEEecC-CCCcccCCeEEEEEeCC
Q 008159 174 TCILSARVFPS-----KAIELILPKH-AGLKFTPTSVIFMKIPS 211 (575)
Q Consensus 174 ~~v~~~~~~~~-----~~~~l~~~~~-~~~~~~pGQ~v~l~~p~ 211 (575)
..+++.+.+++ ++..+++..+ .++.|+||+++-|..+.
T Consensus 14 a~v~~~~~lt~~~~~~~~~hi~~~~~~~~~~y~~GD~l~v~p~N 57 (374)
T 1ddg_A 14 ASLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQN 57 (374)
T ss_dssp EEEEEEEECSCTTCSSEEEEEEEECTTSCCCCCTTCEEEECCCC
T ss_pred EEEEEEEEeCCCCCCceEEEEEEEcCCCCcccCCCCEEEEEcCC
Confidence 46777777753 4677788753 46899999999998654
No 105
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A*
Probab=36.08 E-value=11 Score=35.96 Aligned_cols=23 Identities=26% Similarity=0.544 Sum_probs=18.2
Q ss_pred ceeEEEecCccchHHH-HHHHhhh
Q 008159 528 SDIGVLVCGPESMKES-VAKTSQR 550 (575)
Q Consensus 528 ~~vGV~~cGp~~l~~~-v~~~c~~ 550 (575)
.+.-||+|||+.|.++ +++...+
T Consensus 235 ~~~~vyvCGp~~m~~~~~~~~L~~ 258 (270)
T 2cnd_A 235 DDTLALACGPPPMIQFAISPNLEK 258 (270)
T ss_dssp SSEEEEEECCHHHHHTTTHHHHHT
T ss_pred CCEEEEEECCHHHHHHHHHHHHHH
Confidence 3466999999999986 5777665
No 106
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4
Probab=33.29 E-value=14 Score=40.69 Aligned_cols=38 Identities=18% Similarity=0.192 Sum_probs=27.6
Q ss_pred eeEEEEEEecC-----CeEEEEEecC--CCCcccCCeEEEEEeCC
Q 008159 174 TCILSARVFPS-----KAIELILPKH--AGLKFTPTSVIFMKIPS 211 (575)
Q Consensus 174 ~~v~~~~~~~~-----~~~~l~~~~~--~~~~~~pGQ~v~l~~p~ 211 (575)
..+++.+.+++ ++..+++..+ .+..|+||.++-|..+.
T Consensus 254 a~v~~~~~Lt~~~~~~~~~hiel~~~~~~~~~Y~~GD~l~V~P~N 298 (688)
T 1tll_A 254 ARLLSRQNLQSPKSSRSTIFVRLHTNGNQELQYQPGDHLGVFPGN 298 (688)
T ss_dssp EEEEEEEECSCTTCSSCEEEEEEECTTCGGGCCCTTCEEEECCCC
T ss_pred EEEEeeeecCCCCCCceEEEEEEecCCCCCCccCCCCEEEEecCC
Confidence 56777777752 5677777653 35899999999998644
No 107
>3qfs_A CPR, P450R, NADPH--cytochrome P450 reductase; flavoprotein, FAD, oxidoreductase; HET: FAD NAP; 1.40A {Homo sapiens} PDB: 3qft_A*
Probab=26.66 E-value=24 Score=36.75 Aligned_cols=38 Identities=8% Similarity=0.179 Sum_probs=28.7
Q ss_pred eeEEEEEEecC----CeEEEEEecC-CCCcccCCeEEEEEeCC
Q 008159 174 TCILSARVFPS----KAIELILPKH-AGLKFTPTSVIFMKIPS 211 (575)
Q Consensus 174 ~~v~~~~~~~~----~~~~l~~~~~-~~~~~~pGQ~v~l~~p~ 211 (575)
+.+++.+.+++ ++..+++..+ .+..|+||.++-|....
T Consensus 65 a~v~~n~~Lt~~~~r~~~hie~dl~~s~l~Y~~GD~l~V~p~N 107 (458)
T 3qfs_A 65 AAVTTNRKLNQGTERHLMHLELDISDSKIRYESGDHVAVYPAN 107 (458)
T ss_dssp EEEEEEEECCSSSSSCEEEEEEECTTSCCCCCTTCEEEECCCC
T ss_pred EEEEEEEEcCCCCCCCEEEEEEEeCCCCcccCCCCEEEEEeeC
Confidence 56777787753 5777888764 36899999999998543
No 108
>2qtl_A MSR;, methionine synthase reductase; alpha-beta-alpha structural motif, flattened antiparallel BE barrel, flexible hinge region, connecting domain; HET: FAD; 1.90A {Homo sapiens} PDB: 2qtz_A*
Probab=25.61 E-value=25 Score=37.47 Aligned_cols=38 Identities=13% Similarity=0.190 Sum_probs=28.8
Q ss_pred eeEEEEEEecC-----CeEEEEEecCC-CCcccCCeEEEEEeCC
Q 008159 174 TCILSARVFPS-----KAIELILPKHA-GLKFTPTSVIFMKIPS 211 (575)
Q Consensus 174 ~~v~~~~~~~~-----~~~~l~~~~~~-~~~~~pGQ~v~l~~p~ 211 (575)
+.+++.+.+++ ++..++|..+. .+.|+||+++-|..+.
T Consensus 117 a~v~~~~~Lt~~~~~r~v~hield~~~~~l~Y~~GD~l~V~P~N 160 (539)
T 2qtl_A 117 VPISKAVQLTTNDAIKTTLLVELDISNTDFSYQPGDAFSVICPN 160 (539)
T ss_dssp EEEEEEEECSCTTCSSCEEEEEEECTTSCCCCCTTCEEEEECCC
T ss_pred EEEEeeEEcCCCCCCCcEEEEEEecCCCCcCcCCCCEEEEEeCC
Confidence 56777777752 56888887654 5799999999998654
No 109
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=25.46 E-value=4.5 Score=48.14 Aligned_cols=48 Identities=6% Similarity=-0.140 Sum_probs=38.7
Q ss_pred cccccCCcccccc-cccCchhHHHHHHH-HHHH-HHhhhhhHHHHHHHHhh
Q 008159 431 SEKLAAPSEKVVS-KEKTPSWVADLIIL-SSFI-IAITGSTLMAILLRWRR 478 (575)
Q Consensus 431 ~~~~~~~~~~~~~-~~~~~~sll~~l~~-~g~~-~~~~C~~G~C~~C~~~~ 478 (575)
.+++.+++..++. .+++..+||+.|.+ .++. ...+|+.|.||+|.+-+
T Consensus 5 ~i~~~vNg~~~~~~~~~p~~~ll~~LR~~~~ltgtk~gC~~g~CGaCtV~~ 55 (1332)
T 3unc_A 5 ELVFFVNGKKVVEKNADPETTLLAYLRRKLGLRGTKLGCGEGGCGACTVML 55 (1332)
T ss_dssp CEEEEETTEEEEETTCCTTCBHHHHHHHTSCCTTSCCSCSSSSSCTTEEEE
T ss_pred cEEEEECCEEEEeecCCCCCCHHHHHhhhcCCCCcCCCcCCCCCCCcEEEE
Confidence 4677788887764 68889999999987 3554 47899999999998766
No 110
>2bpo_A CPR, P450R, NADPH-cytochrom P450 reductase; NADPH-cytochrome P450 reductase, diflavin reductase, FAD, FMN-binding, electron transfer; HET: FAD FMN NAP; 2.9A {Saccharomyces cerevisiae} PDB: 2bn4_A* 2bf4_A*
Probab=24.86 E-value=27 Score=38.40 Aligned_cols=38 Identities=11% Similarity=0.126 Sum_probs=27.7
Q ss_pred eeEEEEEEec----CCeEEEEEecC-CCCcccCCeEEEEEeCC
Q 008159 174 TCILSARVFP----SKAIELILPKH-AGLKFTPTSVIFMKIPS 211 (575)
Q Consensus 174 ~~v~~~~~~~----~~~~~l~~~~~-~~~~~~pGQ~v~l~~p~ 211 (575)
+.+++.+.++ .++..|++..+ .+..|+||+++-|....
T Consensus 262 a~v~~~~~L~~~~~~~~~hie~d~~~~~~~Y~~GD~l~V~P~N 304 (682)
T 2bpo_A 262 APIVKSRELFSSNDRNCIHSEFDLSGSNIKYSTGDHLAVWPSN 304 (682)
T ss_dssp EEEEEEEECCCCSSCCEEEEEEECTTBTCCCCTTCEEEECCCC
T ss_pred EEEEEEEEccCCCCCCEEEEEEEcCCCCceecCCCEEEEEcCC
Confidence 4677777774 25677777654 37899999999998543
No 111
>4gd3_A NI/Fe-hydrogenase 1 B-type cytochrome subunit; O2-tolerant H2:quinone oxidoreductase, membrane-bound, NI-Fe hydrogenase-cytochrome B complex; HET: LMT HEM; 3.30A {Escherichia coli}
Probab=24.82 E-value=2.7e+02 Score=25.47 Aligned_cols=22 Identities=9% Similarity=-0.120 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh
Q 008159 51 SVRYHIWLGTAMIFFATIHGGS 72 (575)
Q Consensus 51 ~~~~Hr~~g~~~~~~~~~H~~~ 72 (575)
...+|+++|.+++++.++..+.
T Consensus 59 ~~~~H~~~G~~~~~l~~~Rl~w 80 (235)
T 4gd3_A 59 IRLIHFSAGMVFTVVLLMRIYW 80 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4468999999999999988654
No 112
>3qe2_A CPR, P450R, NADPH--cytochrome P450 reductase; cypor, antley-bixler syndrome, flavoprotein, FMN, FAD, oxidoreductase; HET: FAD FMN NAP; 1.75A {Homo sapiens} PDB: 3qfc_A* 3qfr_A* 1amo_A* 1j9z_A* 1ja0_A* 1ja1_A* 3es9_A* 3ojw_A* 3ojx_A* 3fjo_A* 1b1c_A*
Probab=23.84 E-value=29 Score=37.72 Aligned_cols=37 Identities=8% Similarity=0.163 Sum_probs=27.2
Q ss_pred eeEEEEEEecC----CeEEEEEecCC-CCcccCCeEEEEEeC
Q 008159 174 TCILSARVFPS----KAIELILPKHA-GLKFTPTSVIFMKIP 210 (575)
Q Consensus 174 ~~v~~~~~~~~----~~~~l~~~~~~-~~~~~pGQ~v~l~~p 210 (575)
+.+++.+.++. ++..+++..+. +..|+||.++-|...
T Consensus 225 a~v~~n~~Lt~~~~~~~~hie~~~~~~~~~Y~~GD~l~V~p~ 266 (618)
T 3qe2_A 225 AAVTTNRKLNQGTERHLMHLELDISDSKIRYESGDHVAVYPA 266 (618)
T ss_dssp EEEEEEEECSCCSSSCEEEEEEECTTSCCCCCTTCEEEECCC
T ss_pred EEEEeEEEcCCCCCCcEEEEEEEcCCCCcccccCCEEEEEcC
Confidence 45677777742 57778887654 689999999999754
No 113
>1kqf_C FDH-N gamma, formate dehydrogenase, nitrate-inducible, cytochr B556(FDN) subunit; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: f.21.1.1 PDB: 1kqg_C*
Probab=23.40 E-value=4e+02 Score=23.81 Aligned_cols=23 Identities=13% Similarity=0.069 Sum_probs=17.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHh
Q 008159 48 FEASVRYHIWLGTAMIFFATIHG 70 (575)
Q Consensus 48 ~~~~~~~Hr~~g~~~~~~~~~H~ 70 (575)
.+....+|+++|.++++..++-.
T Consensus 50 ~~~~~~~H~~~G~~~~~l~~~r~ 72 (217)
T 1kqf_C 50 PQMGRILHPFFGIAIFVALMFMF 72 (217)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHH
Confidence 34577899999999888777643
Done!