BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008163
(575 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9S746|HTH_ARATH Protein HOTHEAD OS=Arabidopsis thaliana GN=HTH PE=1 SV=1
Length = 594
Score = 585 bits (1508), Expect = e-166, Method: Compositional matrix adjust.
Identities = 291/525 (55%), Positives = 372/525 (70%), Gaps = 15/525 (2%)
Query: 46 SYYDYIIIGGGTAGCPLAATLSQNASVLLLERGGSPYGNPNITNLGSFGAALSDLSSTSP 105
S YDYI+IGGGTAGCPLAATLSQN SVL+LERGG P+ N N++ L +F L+D+S++S
Sbjct: 61 SSYDYIVIGGGTAGCPLAATLSQNFSVLVLERGGVPFTNANVSFLRNFHIGLADISASSA 120
Query: 106 SQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREVGWDERLVNESYQWVEKVVAF 165
SQ F+S DGV N+RARVLGGGSC+NAGFY+RA +V+ GWD +LV ESY WVE+ +
Sbjct: 121 SQAFVSTDGVYNARARVLGGGSCINAGFYSRADAAFVKRAGWDPKLVKESYPWVEREIVH 180
Query: 166 EPPMRQWQSAVRDGLVEVGVLPYNGFTYDHMYGTKIGGTIFDQNGQRHTAADLLEYANPS 225
+P + WQ A+RD L+EVGV P+NGFTYDH+ GTKIGGTIFD+ G+RHTAA+LL YANP
Sbjct: 181 QPKLTLWQKALRDSLLEVGVRPFNGFTYDHVSGTKIGGTIFDRFGRRHTAAELLAYANPQ 240
Query: 226 GLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSP 285
L +L++A+V K++F G RP GV+F+D G +H+A L N +E+I+S+GA+GSP
Sbjct: 241 KLRVLIYATVQKIVFDTSG-TRPRVTGVIFKDEKGNQHQALLSNRKGSEVILSSGAIGSP 299
Query: 286 QLLMLSGAH--------NITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQ 337
Q+LMLSG I VVL+ VG+GM+DNPMN I VPS P+E SLIQ VGIT+
Sbjct: 300 QMLMLSGIGPKKELQRLKIPVVLENEHVGKGMADNPMNTILVPSKAPIEQSLIQTVGITK 359
Query: 338 FGSYIEAASGENFAGGSPSP--RDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDD 395
G Y+EA++G G SP YG+ S K S +P KQR PEA I K
Sbjct: 360 MGVYVEASTG---FGQSPESIHTHYGIMSNKNELFSTIPAKQRRPEATQAYITRNKYQLH 416
Query: 396 PAFRGGFILEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIE 455
AF G FILEK+ P+S GHL L N +DNPSVTFNYFK P DLQRCV+ I + K++
Sbjct: 417 EAFNGSFILEKLAYPISRGHLSLVNTNVDDNPSVTFNYFKHPVDLQRCVEAIRLVSKVVT 476
Query: 456 SKSFSKF-KYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQV 514
S F + + + +V +++++ A +NL P+ N + S+ QFC+DTV+TIWHYHGGC V
Sbjct: 477 SNRFLNYTQCDKQNVHKMLSLSVKANINLRPKQLNDTKSMAQFCKDTVVTIWHYHGGCLV 536
Query: 515 GKVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYVNL 559
GKVV + KVLGVD LRVIDGSTF SPGTNPQAT+MM+GRY+ +
Sbjct: 537 GKVVSPNRKVLGVDRLRVIDGSTFDESPGTNPQATMMMMGRYMGV 581
>sp|Q9SSM2|MDLL_ARATH (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana GN=At1g73050
PE=2 SV=1
Length = 552
Score = 454 bits (1168), Expect = e-126, Method: Compositional matrix adjust.
Identities = 256/541 (47%), Positives = 333/541 (61%), Gaps = 53/541 (9%)
Query: 35 FMHNATAAQPVSYYDYIIIGGGTAGCPLAATLSQNASVLLLERGGSPYGNPNITNLGSFG 94
F+ NAT YYDYII+GGGTAGCPLAATLSQ+ VLLLERGG PY PN+ + F
Sbjct: 41 FISNATDFASEDYYDYIIVGGGTAGCPLAATLSQSFRVLLLERGGVPYNRPNVMSHDGFL 100
Query: 95 AALSDLSS-TSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREVG--WDERL 151
L+D+++ SP+Q FISE+GV N+R RVLGG S +NAGFY+RA + G WD
Sbjct: 101 TTLTDVNNFDSPAQSFISEEGVPNARGRVLGGSSAINAGFYSRADKQFFENSGLVWDLSS 160
Query: 152 VNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFTYDHMYGTKIGGTIFDQNGQ 211
VN+SY+WVE+ + F P +R WQ+A+RD L+EVGV P+NGFT +H GTKIGG+ FD+ G+
Sbjct: 161 VNQSYEWVERAIVFRPQLRTWQTAIRDALLEVGVHPFNGFTLEHKVGTKIGGSTFDRTGR 220
Query: 212 RHTAADLLEYANPSGLTLLLHASVHKVLF----RIKGKARPVAHGVVFRDATGAKHRAYL 267
RH++ADLL YA S + + ++A+V +VL + G + A GVV+RD G H A +
Sbjct: 221 RHSSADLLRYARSSNIRVAVYATVERVLLASSPSVSG-SNVSAIGVVYRDQLGRFHHALI 279
Query: 268 KNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDNPMNAIFV 319
++ + E+I+SAGALGSPQLL LSG I V LDQP VG + DNP N I +
Sbjct: 280 RD--RGEVILSAGALGSPQLLFLSGIGPRSYLSTWGIPVALDQPHVGDFVYDNPRNGISI 337
Query: 320 PSPVPVEVSLIQVVGITQFGSYIEAASGE-NFAGGSPSPRDYGMFSPKIGQLSKVPPKQR 378
PVP+E SLIQVVG+T+ G+++EAAS FA SP + P
Sbjct: 338 VPPVPMENSLIQVVGVTEDGAFLEAASNVIPFA------------SPLHSVFIRAPA--- 382
Query: 379 TPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPE 438
+P + I+EK++GPVS G L L + + NP V FNYF +P+
Sbjct: 383 SPLYVPVTT---------------IMEKILGPVSIGLLRLASTDVRINPVVRFNYFSDPQ 427
Query: 439 DLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFC 498
DL+RCV G I +I+ S++ F AP LP + + FC
Sbjct: 428 DLERCVNGTRKIGEILRSRAMQDFMIREWFGNRRFRFVG-AP---LPVDQSNDLVMADFC 483
Query: 499 RDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYVN 558
R TV TIWHYHGG VGKVVD D KV+GV++LR++DGSTF SPGTNPQAT+MMLGRY+
Sbjct: 484 RRTVSTIWHYHGGAVVGKVVDSDLKVIGVNSLRLVDGSTFNISPGTNPQATLMMLGRYMG 543
Query: 559 L 559
L
Sbjct: 544 L 544
>sp|P52706|MDL1_PRUSE (R)-mandelonitrile lyase 1 OS=Prunus serotina GN=MDL1 PE=1 SV=1
Length = 563
Score = 375 bits (963), Expect = e-103, Method: Compositional matrix adjust.
Identities = 217/551 (39%), Positives = 304/551 (55%), Gaps = 58/551 (10%)
Query: 21 HDFCACQKAAPNYSFMHNATAAQPVSYYDYIIIGGGTAGCPLAATLSQNASVLLLERGGS 80
HDF + F ++AT + YDY+I+GGGT+GCPLAATLS+ VL+LERG
Sbjct: 34 HDFSYLR-------FAYDATDLELEGSYDYVIVGGGTSGCPLAATLSEKYKVLVLERGSL 86
Query: 81 PYGNPNITNLGSFGAALS-DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRA-- 137
P PN+ F L + +P +RF+SEDG+ N R RVLGG S +NAG Y RA
Sbjct: 87 PTAYPNVLTADGFVYNLQQEDDGKTPVERFVSEDGIDNVRGRVLGGTSMINAGVYARANT 146
Query: 138 APYYVREVGWDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFTYDHMY 197
+ Y V WD LVN++Y+WVE + F+P + WQS +E GV P +GF+ DH
Sbjct: 147 SIYSASGVDWDMDLVNKTYEWVEDTIVFKPNYQPWQSVTGTAFLEAGVDPNHGFSLDHEA 206
Query: 198 GTKIGGTIFDQNGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD 257
GT+I G+ FD G RH A +LL N + L + +HASV K++F A GV++RD
Sbjct: 207 GTRITGSTFDNKGTRHAADELLNKGNSNNLRVGVHASVEKIIF--SNAPGLTATGVIYRD 264
Query: 258 ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGM 309
+ G HRA++++ K E+IVSAG +G+PQLL+LSG + NI VVL P VGQ +
Sbjct: 265 SNGTPHRAFVRS--KGEVIVSAGTIGTPQLLLLSGVGPESYLSSLNIPVVLSHPYVGQFL 322
Query: 310 SDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQ 369
DNP N I + P P+E +++ V+GI+ +F S S +
Sbjct: 323 HDNPRNFINILPPNPIEPTIVTVLGISN-----------DFYQCSFSSLPF--------- 362
Query: 370 LSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELR-TRNPNDNPS 428
PP P L + F KV GP+S G L L+ + N +P+
Sbjct: 363 --TTPPFSFFPST-------SYPLPNSTF--AHFASKVAGPLSYGSLTLKSSSNVRVSPN 411
Query: 429 VTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLLPRHS 488
V FNY+ P DL CV G+ I +++ + + +K E + N+ LP+
Sbjct: 412 VKFNYYSNPTDLSHCVSGMKKIGELLSTDALKPYKVEDLPGIEGFNILGIP----LPKDQ 467
Query: 489 NASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQA 548
+ E FCR++V + WHYHGGC VGKV+D D++V G+DALRV+DGSTF Y+P ++PQ
Sbjct: 468 TDDAAFETFCRESVASYWHYHGGCLVGKVLDGDFRVTGIDALRVVDGSTFPYTPASHPQG 527
Query: 549 TVMMLGRYVNL 559
+MLGRYV +
Sbjct: 528 FYLMLGRYVGI 538
>sp|Q945K2|MDL2_PRUDU (R)-mandelonitrile lyase 2 OS=Prunus dulcis GN=MDL2 PE=1 SV=1
Length = 563
Score = 372 bits (954), Expect = e-102, Method: Compositional matrix adjust.
Identities = 221/566 (39%), Positives = 313/566 (55%), Gaps = 59/566 (10%)
Query: 6 LRLSFVATLATFLFFHDFCACQKAAPNYSFMHNATAAQPVSYYDYIIIGGGTAGCPLAAT 65
L+ S V +LAT HDF SF ++AT + YDY+I+GGGT+GCPLAAT
Sbjct: 20 LQYSEVHSLAT-TSDHDFSYL-------SFAYDATDLELEGSYDYVIVGGGTSGCPLAAT 71
Query: 66 LSQNASVLLLERGGSPYGNPNITNLGSFGAALS-DLSSTSPSQRFISEDGVINSRARVLG 124
LS+ VL+LERG P PN+ F L + +P +RF+SEDG+ N R RVLG
Sbjct: 72 LSEKYKVLVLERGSLPTAYPNVLTADGFVYNLQQEDDGKTPVERFVSEDGIDNVRGRVLG 131
Query: 125 GGSCLNAGFYTRA--APYYVREVGWDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVE 182
G S +NAG Y RA + Y V WD LVN++Y+WVE + ++P + WQS + +E
Sbjct: 132 GTSIINAGVYARANTSIYSASGVDWDMDLVNQTYEWVEDTIVYKPNSQSWQSVTKTAFLE 191
Query: 183 VGVLPYNGFTYDHMYGTKIGGTIFDQNGQRHTAADLLEYANPSGLTLLLHASVHKVLFRI 242
GV P +GF+ DH GT+I G+ FD G RH A +LL N + L + +HASV K++F
Sbjct: 192 AGVHPNHGFSLDHEEGTRITGSTFDNKGTRHAADELLNKGNSNNLRVGVHASVEKIIF-- 249
Query: 243 KGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AH 294
A GV++RD+ G H+A++++ K E+IVSAG +G+PQLL+LSG +
Sbjct: 250 SNAPGLTATGVIYRDSNGTPHQAFVRS--KGEVIVSAGTIGTPQLLLLSGVGPESYLSSL 307
Query: 295 NITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGS 354
NI VVL P VGQ + DNP N I + P P+E +++ V+GI+ +F S
Sbjct: 308 NIPVVLSHPYVGQFLHDNPRNFINILPPNPIEPTIVTVLGISN-----------DFYQCS 356
Query: 355 PSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTG 414
S + PP P A L + F KV GP+S G
Sbjct: 357 FSSLPF-----------TTPPFGFFPSA-------SYPLPNSTF--AHFASKVAGPLSYG 396
Query: 415 HLELR-TRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILV 473
L L+ + N +P+V FNY+ DL CV G+ I +++ + + +K E +
Sbjct: 397 SLTLKSSSNVRVSPNVKFNYYSNLTDLSHCVSGMKKIGELLSTDALKPYKVEDLPGVEGF 456
Query: 474 NMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVI 533
N+ LP+ + E FCR++V + WHYHGGC VGKV+D D++V G++ALRV+
Sbjct: 457 NILGIP----LPKDQTDDAAFETFCRESVASYWHYHGGCLVGKVLDGDFRVTGINALRVV 512
Query: 534 DGSTFYYSPGTNPQATVMMLGRYVNL 559
DGSTF Y+P ++PQ +MLGRYV +
Sbjct: 513 DGSTFPYTPASHPQGFYLMLGRYVGI 538
>sp|P52707|MDL3_PRUSE (R)-mandelonitrile lyase 3 OS=Prunus serotina GN=MDL3 PE=2 SV=1
Length = 573
Score = 363 bits (933), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 210/551 (38%), Positives = 305/551 (55%), Gaps = 57/551 (10%)
Query: 21 HDFCACQKAAPNYSFMHNATAAQPVSYYDYIIIGGGTAGCPLAATLSQNASVLLLERGGS 80
HDF SF+++AT + YDYII+GGGTAGCPLAATLS N SVL+LERG
Sbjct: 34 HDFSYL-------SFVYDATDPELEGSYDYIIVGGGTAGCPLAATLSANYSVLVLERGSL 86
Query: 81 PYGNPNITNLGSFGAALS-DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAP 139
P PN+ F L + +P +RF+SEDG+ N R RVLGG S +NAG Y RA
Sbjct: 87 PTEYPNLLISDGFVYNLQQEDDGKTPVERFVSEDGIDNVRGRVLGGTSMINAGVYVRANT 146
Query: 140 YYVREVG--WDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFTYDHMY 197
+ + G WD LVN++Y+WVE + FEP + WQ+ + +E G+LP NGF+ DH+
Sbjct: 147 SFFNQTGIEWDMDLVNQTYEWVEDTIVFEPDSQTWQTVIGTAYLEAGILPNNGFSVDHLA 206
Query: 198 GTKIGGTIFDQNGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD 257
GT++ G+ FD NG RH + +LL +P+ L + + A+V K++F + A GV++ D
Sbjct: 207 GTRLTGSTFDNNGTRHASDELLNKGDPNNLRVAVQAAVEKIIFS-SNTSGVTAIGVIYTD 265
Query: 258 ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGM 309
+ G H+A+++ + E+I+SAG +GSPQLL+LSG + NI+VV P VGQ +
Sbjct: 266 SNGTTHQAFVRG--EGEVILSAGPIGSPQLLLLSGVGPESYLTSLNISVVASHPYVGQYI 323
Query: 310 SDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQ 369
DNP N I + P P+E S + V+GIT +F S S +
Sbjct: 324 YDNPRNFINILPPNPIEASTVTVLGITS-----------DFYQCSISSLPF--------- 363
Query: 370 LSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELR-TRNPNDNPS 428
PP P L + F I+ KV GP+S G + L + + P+
Sbjct: 364 --DTPPFSFFPTT-------SYPLPNQTF--AHIVNKVPGPLSHGTVTLNSSSDVRVGPN 412
Query: 429 VTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLLPRHS 488
V FNY+ DL CV G+ + +++ + + +K E + N+ LP +
Sbjct: 413 VKFNYYSNLTDLSHCVSGMKKLGEVLSTDALEPYKVEDLPGIDGFNILGIP----LPENQ 468
Query: 489 NASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQA 548
+ E FCR++V + WHYHGGC VGKV+D ++V G++ALRV+DGSTF +P ++PQ
Sbjct: 469 TDDAAFETFCRESVASYWHYHGGCLVGKVLDDGFRVTGINALRVVDGSTFPSTPASHPQG 528
Query: 549 TVMMLGRYVNL 559
+MLGRY+ +
Sbjct: 529 FYLMLGRYMGI 539
>sp|O50048|MDL2_PRUSE (R)-mandelonitrile lyase 2 OS=Prunus serotina GN=MDL2 PE=2 SV=1
Length = 576
Score = 363 bits (931), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 214/549 (38%), Positives = 306/549 (55%), Gaps = 57/549 (10%)
Query: 21 HDFCACQKAAPNYSFMHNATAAQPVSYYDYIIIGGGTAGCPLAATLSQNASVLLLERGGS 80
HDF + F+++A + YDYII+GGGTAGCPLAATLS N SVL+LERG
Sbjct: 35 HDFSYLE-------FVYDANDTELEGTYDYIIVGGGTAGCPLAATLSANYSVLVLERGTL 87
Query: 81 PYGNPNITNLGSFGAALS-DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAP 139
P PN+ F L + +P +RF+S DG+ N R RVLGG S +NAG Y RA
Sbjct: 88 PTEYPNLLTSDGFIYNLQQEDDGQTPVERFVSGDGIDNVRGRVLGGTSMINAGVYVRANT 147
Query: 140 YYVREVG--WDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFTYDHMY 197
+ + G WD LVN++Y WVE + F+P + WQ+ +EVG+LP NGF+ DH+
Sbjct: 148 SFFNQTGIEWDMDLVNKTYDWVEDTIVFKPDFQFWQNLTGTAFLEVGILPDNGFSLDHLE 207
Query: 198 GTKIGGTIFDQNGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD 257
GT++ G+ FD NG RH + +LL +P+ L + +HA+V K++F + A GV++ D
Sbjct: 208 GTRLTGSTFDNNGTRHASDELLNKGDPNNLRVAVHAAVEKIIFS-SDSSGVTAIGVIYTD 266
Query: 258 ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGM 309
+ G H+A+++ E+I+SAG +GSPQLL+LSG + NI+VV P VGQ +
Sbjct: 267 SNGTTHQAFVRG--DGEVILSAGPIGSPQLLLLSGVGLESYLTSLNISVVASHPYVGQYI 324
Query: 310 SDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQ 369
DNP N I + P P+E S + V+GIT Y + S F S +P +G F
Sbjct: 325 YDNPRNFINILPPNPIEASTVTVLGITS-DFYQCSISSLPF---STAP--FGFF------ 372
Query: 370 LSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELR-TRNPNDNPS 428
P P L + F I+ KV GP+S G + L+ T + P+
Sbjct: 373 -----PNPTYP------------LPNTTF--AHIVNKVPGPLSHGTVLLQSTSDVRVAPN 413
Query: 429 VTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLLPRHS 488
VTFNY+ DL CV G+ I + + S + +K E + ++ LP +
Sbjct: 414 VTFNYYSNTTDLAHCVSGMKKIGEFLSSDALKPYKVEDLPGIEGFDILGIP----LPENQ 469
Query: 489 NASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQA 548
+ E FCR+ V + WHYHGGC VG+V+D D++V G++ALRV+DGSTF +P ++PQ
Sbjct: 470 TDDAAFETFCREAVASYWHYHGGCLVGEVLDDDFRVTGINALRVVDGSTFPSTPASHPQG 529
Query: 549 TVMMLGRYV 557
+MLGRY+
Sbjct: 530 FYLMLGRYM 538
>sp|O82784|MDL4_PRUSE (R)-mandelonitrile lyase 4 OS=Prunus serotina GN=MDL4 PE=2 SV=1
Length = 574
Score = 356 bits (913), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 215/563 (38%), Positives = 303/563 (53%), Gaps = 57/563 (10%)
Query: 7 RLSFVATLATFLFFHDFCACQKAAPNYSFMHNATAAQPVSYYDYIIIGGGTAGCPLAATL 66
+ S V +LA HDF + F++NA + YDYII+GGGT+GCPLAATL
Sbjct: 21 QYSEVHSLANTSSEHDFGYLK-------FVYNAVDLELEGSYDYIIVGGGTSGCPLAATL 73
Query: 67 SQNASVLLLERGGSPYGNPNITNLGSFGAALSDLSS-TSPSQRFISEDGVINSRARVLGG 125
S N SVL+LERG PN + F L +P +RF+SEDG+ N R+R+LGG
Sbjct: 74 SANYSVLVLERGTIATEYPNTLTVDGFAYNLQQQDDGKTPVERFVSEDGIDNVRSRILGG 133
Query: 126 GSCLNAGFYTRAAPYYVREVG--WDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEV 183
+ +NAG Y RA + G WD LVNE+Y+WVE + ++P + WQS +E
Sbjct: 134 TTIINAGVYARANESFYNNSGVEWDLDLVNEAYEWVEDAIVYKPSNQSWQSITGTAFLEA 193
Query: 184 GVLPYNGFTYDHMYGTKIGGTIFDQNGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIK 243
GV P NGF H GT++ G+ FD +G RH + +LL +P L + + A+V K++F +
Sbjct: 194 GVHPDNGFGLVHEEGTRLTGSTFDNSGTRHASDELLNKGDPDNLKVAVEAAVQKIIFSTE 253
Query: 244 GKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHN 295
A GVV+ D+ G HRA + K E+I+SAG LG+PQLL+LSG + N
Sbjct: 254 SSGL-TAVGVVYTDSNGTSHRALVSG--KGEVILSAGTLGTPQLLLLSGVGPESYLTSLN 310
Query: 296 ITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSP 355
I+VV P VGQ ++DNP N I + P P+E S + V+GIT +F S
Sbjct: 311 ISVVASHPYVGQYVNDNPRNFINILPPNPIEPSTVTVLGITS-----------DFYQCSL 359
Query: 356 SPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGH 415
S + PP P L + F I+ KV GP+S G
Sbjct: 360 SSLPF-----------DTPPFSLFPTT-------SYPLPNQTF--AHIVSKVPGPLSAGS 399
Query: 416 LELR-TRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVN 474
L L+ + N + P+V FNY +P DL CV G+ I + + + +K + + N
Sbjct: 400 LTLQSSSNVSVAPNVKFNYCSDPVDLTHCVSGMKKIGVFLSTDALKPYKVDDLPGIDGFN 459
Query: 475 MTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVID 534
+ + LP + + E+FCRDTV + WHYHGG VGKV+D +++V G++ALRV+D
Sbjct: 460 ILGTP----LPENQTDDAAFEKFCRDTVASYWHYHGGAIVGKVIDGNFRVTGINALRVVD 515
Query: 535 GSTFYYSPGTNPQATVMMLGRYV 557
GSTF +P ++PQ +MLGRYV
Sbjct: 516 GSTFPATPASHPQGFYLMLGRYV 538
>sp|O24243|MDL1_PRUDU (R)-mandelonitrile lyase 1 OS=Prunus dulcis GN=MDL1 PE=2 SV=1
Length = 559
Score = 352 bits (902), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 212/561 (37%), Positives = 296/561 (52%), Gaps = 77/561 (13%)
Query: 21 HDFCACQKAAPNYSFMHNATAAQPVSYYDYIIIGGGTAGCPLAATLSQNASVLLLERGGS 80
HDF + F++NAT YDYI+IGGGT+GCPLAATLS+ VLLLERG
Sbjct: 34 HDFSYLK-------FVYNATDTSLEGSYDYIVIGGGTSGCPLAATLSEKYKVLLLERGTI 86
Query: 81 PYGNPNITNLGSFGAALSDLSS-TSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAP 139
PN F L +P +RF+SEDG+ N RAR+LGG + +NAG Y RA
Sbjct: 87 ATEYPNTLTADGFAYNLQQQDDGKTPVERFVSEDGIDNVRARILGGTTIINAGVYARANI 146
Query: 140 YYVREVG--WDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFTYDHMY 197
+ + G WD LVN++Y+WVE + +P + WQS + +G +E G+LP NGF+ DH
Sbjct: 147 SFYSQTGIEWDLDLVNKTYEWVEDAIVVKPNNQSWQSVIGEGFLEAGILPDNGFSLDHEA 206
Query: 198 GTKIGGTIFDQNGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD 257
GT++ G+ FD NG RH A +LL +P+ L + + ASV K+LF + A GV++ D
Sbjct: 207 GTRLTGSTFDNNGTRHAADELLNKGDPNNLLVAVQASVEKILFS-SNTSNLSAIGVIYTD 265
Query: 258 ATGAKHRAYLK-NGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQG 308
+ G H+A+++ NG E+IVSAG +G+PQLL+LSG + NITVV P VGQ
Sbjct: 266 SDGNSHQAFVRGNG---EVIVSAGTIGTPQLLLLSGVGPESYLSSLNITVVQPNPYVGQF 322
Query: 309 MSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIG 368
+ +NP N I P P+E S++ V+GI DY S
Sbjct: 323 LYNNPRNFINNFPPNPIEASVVTVLGIRS---------------------DYYQVSLSSL 361
Query: 369 QLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELRTRNP-NDNP 427
S PP P L + F I+ +V GP+S G + L + + P
Sbjct: 362 PFS-TPPFSLFPTT-------SYPLPNSTF--AHIVSQVPGPLSHGSVTLNSSSDVRIAP 411
Query: 428 SVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFK---------YESMSVPILVNMTAS 478
++ FNY+ DL CV G+ + ++ +K+ +K + + VP
Sbjct: 412 NIKFNYYSNSTDLANCVSGMKKLGDLLRTKALEPYKARDVLGIDGFNYLGVP-------- 463
Query: 479 APVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGSTF 538
LP + S E FC D V + WHYHGG VGKV+D ++V+G+ ALRV+D STF
Sbjct: 464 -----LPENQTDDASFETFCLDNVASYWHYHGGSLVGKVLDDSFRVMGIKALRVVDASTF 518
Query: 539 YYSPGTNPQATVMMLGRYVNL 559
Y P ++PQ +MLGRYV L
Sbjct: 519 PYEPNSHPQGFYLMLGRYVGL 539
>sp|Q9WWW2|ALKJ_PSEPU Alcohol dehydrogenase [acceptor] OS=Pseudomonas putida GN=alkJ PE=3
SV=1
Length = 552
Score = 106 bits (265), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 158/571 (27%), Positives = 234/571 (40%), Gaps = 118/571 (20%)
Query: 48 YDYIIIGGGTAGCPLAATLSQNAS--VLLLERGGS--------PYGNPNITNLGSFGAAL 97
YDYII+G G+AGC LA LS + S V LLE G P G ++N A
Sbjct: 2 YDYIIVGAGSAGCVLANRLSADPSKRVCLLEAGPRDTNPLIHMPLGIALLSNSKKLNWAF 61
Query: 98 SDLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREVGWDERLVNESYQ 157
T+P Q+ ++E + R + LGG S +NA Y R + W E+ E +
Sbjct: 62 Q----TAP-QQHLNERSLFWPRGKTLGGSSSINAMVYIRGHEEDYQ--AW-EQAGGEYWG 113
Query: 158 WVEKVVAF---EPPMRQWQS---------AVRD---------GLVEVGV---LPYNG-FT 192
W F E R +S AV D V+ G+ + +NG F
Sbjct: 114 WKRAFALFKKLEHNQRFDKSNYHGTDGELAVSDLKDLNPLSKSFVQAGMEAKISFNGDFN 173
Query: 193 YDHMYGTKIGGTIFDQNGQRHTAA-----DLLEYANPSGLTLLLHASVHKVLFRIKGKAR 247
H G + ++GQR ++A D+++ N L ++ A KVLF +
Sbjct: 174 GAHQEGVGFY-QVTQKHGQRWSSARAFLHDVIDRPN---LDIITEAHATKVLFEDRK--- 226
Query: 248 PVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGA--------HNITVV 299
A GV + + +K E+I+S GA+ +PQLLMLSG H I +V
Sbjct: 227 --AVGVSYIQKNMHQQ---VKTTDSGEVILSLGAVNTPQLLMLSGVGAAAELKEHGIALV 281
Query: 300 LDQPLVGQGMSDNP----MNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSP 355
D P VG+ + D+ M A +P+ V S I G+ SYI G + +
Sbjct: 282 HDLPEVGKNLQDHLDITLMCAANSRTPIGVAFSFIPR-GLVGLFSYIFKRKGFLTSNVAE 340
Query: 356 SPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDP----AFRGGFILEKV-MGP 410
S G K P++ P + L D A G+ L + P
Sbjct: 341 S-----------GGFVKSSPERDRPNLQFHFLPTY--LKDHGRKIAVGYGYTLHICDLLP 387
Query: 411 VSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSK-FKYESMSV 469
S G + L++ NP D+P + NY +PED++ + GI I ++ S +K FK E +
Sbjct: 388 KSRGRIGLKSANPMDDPLIDPNYLSDPEDIKTMIAGIKIGRAIFDAPSMAKHFKREIVPG 447
Query: 470 PILVNMTASAPVNLLPRHSNASTSLEQFC---RDTVMTIWHYHGGCQVGK----VVDHDY 522
P A TS ++ R TI+H G C++GK VVD
Sbjct: 448 P-------------------AVTSDDEIVADIRSRAETIYHPVGTCRMGKDPASVVDPCL 488
Query: 523 KVLGVDALRVIDGSTFYYSPGTNPQATVMML 553
+V G+ +RV+D S N A +M+
Sbjct: 489 QVRGLRNIRVVDASIMPNLVAGNTNAPTIMI 519
>sp|B2JS89|BETA_BURP8 Choline dehydrogenase OS=Burkholderia phymatum (strain DSM 17167 /
STM815) GN=betA PE=3 SV=1
Length = 572
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 150/567 (26%), Positives = 236/567 (41%), Gaps = 101/567 (17%)
Query: 48 YDYIIIGGGTAGCPLAATLSQN--ASVLLLERGGSPYGNPNITNLGSFGAALS------- 98
YDYIIIG G+AG LA L+++ +VLLLE GG Y T + AAL+
Sbjct: 6 YDYIIIGAGSAGNVLATRLTEDRDVTVLLLEAGGPDYRFDFRTQMP---AALAYPLQGRR 62
Query: 99 -DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREVGWDERLVNESYQ 157
+ + + + F++ + R + LGG S +N Y R + GW ER E++
Sbjct: 63 YNWAYETDPEPFMNNRRMECGRGKGLGGSSLINGMCYIRGNA--LDYDGWAERKGLENWT 120
Query: 158 WVEKVVAFEPPMRQWQSA---------------------VRDGLVEVGVLPYNGFTYDHM 196
+++ + F + A + + +VE GV T D
Sbjct: 121 YLDCLPYFRKAETRDAGANDYHGGDGPVHVTTSKRGVNPLFEAMVEAGVQAGYPRTDDLN 180
Query: 197 YGTKIGGTIFDQ----NGQR-HTAADLLEYANPS-GLTLLLHASVHKVLFRIKGKARPVA 250
+ G D+ NG+R TA L+ A P LT++ +A+ ++LF K A
Sbjct: 181 GYQQEGFGPMDRTVTANGRRASTARGYLDQARPRPNLTIVTYATTDRILFSGK-----RA 235
Query: 251 HGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGAH--------NITVVLDQ 302
GVV+ D +A + + E+++ +GA+ SPQ+L SG +I VVLD
Sbjct: 236 QGVVYLDG-----QAQITAHARREVLLCSGAIASPQILQRSGVGPGGWLRDLDIPVVLDL 290
Query: 303 PLVGQGMSDN-PMNAIF-VPSPVPVEVSLI----QVVGITQF--GSYIEAASGENFAGGS 354
P VGQ + D+ M + PV + +L+ +GI G+ I AS AGG
Sbjct: 291 PGVGQNLQDHLEMYMQYECKEPVSLYPALLLRNQPAIGIEWMLKGTGI-GASNHFEAGGF 349
Query: 355 PSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTG 414
RD + P I Q +P +A A+ F+ M S G
Sbjct: 350 IRTRDDDPW-PNI-QYHFLP--------VAINYNGTNAIKMHGFQAHV---GSMRSPSRG 396
Query: 415 HLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVN 474
++LR+R+P ++PS+ FNY E D + I +II + +F+ +S +
Sbjct: 397 RVKLRSRDPREHPSILFNYMAEALDWREFRDAIRITREIIAQPALDRFRGRELSPGAELQ 456
Query: 475 MTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG----KVVDHDYKVLGVDAL 530
A ++ F R T +H C +G VVD + +V G++ L
Sbjct: 457 SDA---------------QIDAFVRARAETAYHPSCSCAMGYDDMAVVDGEGRVHGLEGL 501
Query: 531 RVIDGSTFYYSPGTNPQATVMMLGRYV 557
RV+D S N A +ML +
Sbjct: 502 RVVDASIMPRITTGNLNAPTIMLAEKI 528
>sp|Q6FDF9|BETA_ACIAD Choline dehydrogenase OS=Acinetobacter sp. (strain ADP1) GN=betA
PE=3 SV=1
Length = 553
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 148/570 (25%), Positives = 236/570 (41%), Gaps = 104/570 (18%)
Query: 48 YDYIIIGGGTAGCPLAATLSQNA--SVLLLERGGSPYGNPNITNLGSFGAALS------- 98
+DYIIIG G+AG LAA L+++A SVLLLE GG Y + AAL+
Sbjct: 6 FDYIIIGAGSAGNVLAARLTEDADVSVLLLEAGGPDY---RLDFRTQMPAALAYPLQGRR 62
Query: 99 -DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRA-------------------- 137
+ + + + ++ + R + LGG S +N Y R
Sbjct: 63 YNWAYLTEPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLEGWSKLKGLENWTYA 122
Query: 138 --APYY----VREVGWDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGF 191
PYY R++G ++ Y V+ P + + + +VE GV
Sbjct: 123 DCLPYYKKAETRDIGGND------YHGDHGPVSVATP-KDNNNVLFHAMVEAGVQAGYPR 175
Query: 192 TYDHMYGTKIGG-----TIFDQNGQRH-TAADLLEYANPS-GLTLLLHASVHKVLFRIKG 244
T D + G + G +NG+R TA L+ A LT++ HA +K+LF K
Sbjct: 176 T-DDLNGYQQEGFGPMDRTVTKNGRRSSTARGYLDMAKERPNLTIITHAMTNKILFNGK- 233
Query: 245 KARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNI 296
A GV + GA R K E+++ AGA+ SPQ+L SG + +I
Sbjct: 234 ----QAIGVEY--IQGADKRDLKKVMANKEVLLCAGAIASPQILQRSGVGESTFLKSMDI 287
Query: 297 TVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGEN--FAG-- 352
VV D P VG+ + D+ +++ VSL + Y + A G F G
Sbjct: 288 DVVHDLPGVGENLQDHL--EMYLQYKCKQPVSLYPALKW-----YNQPAIGAEWLFLGKG 340
Query: 353 -GSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPV 411
G+ + + G F + + P Q +A A+ + F+ M
Sbjct: 341 IGASNQFEAGGFIRSSDEF-EWPNIQYHFLPVAINYNGSNAVKEHGFQAHV---GSMRSP 396
Query: 412 STGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPI 471
S GH++L++++P ++PS+ FNY +D Q I +I+ + ++ E +S
Sbjct: 397 SRGHIKLKSKDPFEHPSILFNYMSTEQDWQEFRAAIRITREIMHQPALDPYRGEEIS--- 453
Query: 472 LVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK----VVDHDYKVLGV 527
P L + T L+ F R+ T +H C++G+ VVDH +V G+
Sbjct: 454 --------PGKQL----STDTQLDDFVRNHAETAYHPSCSCKMGEDDMAVVDHQGRVHGL 501
Query: 528 DALRVIDGSTFYYSPGTNPQATVMMLGRYV 557
LRV+D S N AT +M+ +
Sbjct: 502 QGLRVVDASIMPLIITGNLNATTIMMAEKI 531
>sp|Q47944|SDH_GLUOY L-sorbose 1-dehydrogenase OS=Gluconobacter oxydans PE=3 SV=1
Length = 531
Score = 102 bits (254), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 151/577 (26%), Positives = 226/577 (39%), Gaps = 127/577 (22%)
Query: 45 VSYYDYIIIGGGTAGCPLAATLSQNAS--VLLLERGGS--------PYGNPNITNLGSFG 94
S +DYI++GGG+AGC LAA LS+N S V L+E G P G +T G
Sbjct: 2 TSGFDYIVVGGGSAGCVLAARLSENPSVRVCLIEAGRRDTHPLIHMPVGFAKMTT----G 57
Query: 95 AALSDLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAP----YYVRE--VGWD 148
DL T P Q+ + + + R+LGGGS +NA +TR P + E GW
Sbjct: 58 PHTWDL-LTEP-QKHANNRQIPYVQGRILGGGSSINAEVFTRGHPSDFDRWAAEGADGWS 115
Query: 149 ERLVNESY-----------QW--------VEKVVAFEPPMRQWQSAVRDGLVEVGVLPYN 189
R V + + W V + P R + + + E+G LPYN
Sbjct: 116 FRDVQKYFIRSEGNAVFSGTWHGTNGPLGVSNLAEPNPTSRAFVQSCQ----EMG-LPYN 170
Query: 190 -GFTYDHMYGTKIGGTIFDQNGQRHTAADLLEYA-NPSGLTLLLHASVHKVLFRIKGKAR 247
F G I N + TA L A LT++ A V K++F
Sbjct: 171 PDFNGASQEGAGIYQMTIRNNRRCSTAVGYLRPALGRKNLTVVTRALVLKIVF------- 223
Query: 248 PVAHGVVFRDATGAKHRAYLKNGPKN------EIIVSAGALGSPQLLMLSG----AH--- 294
+ T A Y+ NG N EI+V+AGA+G+P+L+MLSG AH
Sbjct: 224 ---------NGTRATGVQYIANGTLNTAEASQEIVVTAGAIGTPKLMMLSGVGPAAHLRE 274
Query: 295 -NITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGG 353
I VV D P VG+ + D+ V ++ + + +AG
Sbjct: 275 NGIPVVQDLPGVGENLQDH------------FGVDIVAELKTDESFDKYRKLHWMLWAG- 321
Query: 354 SPSPRDYGMFSP--------KIGQLSKVPPKQRTPEA----IAEAIENMKALDDPAFRGG 401
+Y MF + G P P+ +AEA P G
Sbjct: 322 ----LEYTMFRSGPVASNVVEGGAFWYSDPSSGVPDLQFHFLAEAGAEAGVTSVPKGASG 377
Query: 402 FILEK-VMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFS 460
L V+ P S G + LR+ +P NP V N+ +P DL+ +G+ ++ S
Sbjct: 378 ITLNSYVLRPKSRGTVRLRSADPRVNPMVDPNFLGDPADLETSAEGVRLSYEMFSQPSLE 437
Query: 461 KFKYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK---- 516
K ++ + P + R + R+ T +H C++G+
Sbjct: 438 KHIRKT------CFFSGKQPTMQMYR---------DYAREHGRTSYHPTCTCKMGRDDMS 482
Query: 517 VVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMML 553
VVD KV G++ +R+ D S G+N A +M+
Sbjct: 483 VVDPRLKVHGLEGIRICDSSVMPSLLGSNTNAATIMI 519
>sp|Q00593|ALKJ_PSEOL Alcohol dehydrogenase [acceptor] OS=Pseudomonas oleovorans GN=alkJ
PE=1 SV=1
Length = 558
Score = 99.8 bits (247), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 144/564 (25%), Positives = 233/564 (41%), Gaps = 104/564 (18%)
Query: 48 YDYIIIGGGTAGCPLAATLSQNAS--VLLLERGGS--------PYGNPNITNLGSFGAAL 97
YDYII+G G+AGC LA LS + S V LLE G P G ++N A
Sbjct: 2 YDYIIVGAGSAGCVLANRLSADPSKRVCLLEAGPRDTNPLIHMPLGIALLSNSKKLNWAF 61
Query: 98 SDLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAP--YYV------REVGW-- 147
T+P Q ++ + R + LGG S +NA Y R Y+ R GW
Sbjct: 62 Q----TAPQQN-LNGRSLFWPRGKTLGGSSSINAMVYIRGHEDDYHAWEQAAGRYWGWYR 116
Query: 148 ----------DERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGV---LPYNGFTYD 194
++R + V+ +A ++ + + V+ G+ + +NG ++
Sbjct: 117 ALELFKRLECNQRFDKSEHHGVDGELAVSD--LKYINPLSKAFVQAGMEANINFNG-DFN 173
Query: 195 HMYGTKIGG-TIFDQNGQRHTAADLLEYANPS--GLTLLLHASVHKVLFRIKGKARPVAH 251
Y +G + +NGQR ++A + S L ++ A K+LF + A
Sbjct: 174 GEYQDGVGFYQVTQKNGQRWSSARAFLHGVLSRPNLDIITDAHASKILFEDRK-----AV 228
Query: 252 GVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGA--------HNITVVLDQP 303
GV + H+ +G E+++S GA+G+P LLMLSG H +++V D P
Sbjct: 229 GVSYIKKN-MHHQVKTTSG--GEVLLSLGAVGTPHLLMLSGVGAAAELKEHGVSLVHDLP 285
Query: 304 LVGQGMSDNP----MNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRD 359
VG+ + D+ M A P+ V +S I G++ SY+ G + + S
Sbjct: 286 EVGKNLQDHLDITLMCAANSREPIGVALSFIPR-GVSGLFSYVFKREGFLTSNVAES--- 341
Query: 360 YGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGF-----ILEKVMGPVSTG 414
G K P + P + GG+ I + + P S G
Sbjct: 342 --------GGFVKSSPDRDRPNLQFHFLPTYLKDHGRKIAGGYGYTLHICDLL--PKSRG 391
Query: 415 HLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSK-FKYESMSVPILV 473
+ L++ NP P + NY + ED++ + GI I+++ S +K FK+E VP
Sbjct: 392 RIGLKSANPLQPPLIDPNYLSDHEDIKTMIAGIKIGRAILQAPSMAKHFKHE--VVPGQA 449
Query: 474 NMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK----VVDHDYKVLGVDA 529
T + + R + TI+H G C++GK VVD K+ G+
Sbjct: 450 VKTDDEIIEDIRRRAE--------------TIYHPVGTCRMGKDPASVVDPCLKIRGLAN 495
Query: 530 LRVIDGSTFYYSPGTNPQATVMML 553
+RV+D S + N A +M+
Sbjct: 496 IRVVDASIMPHLVAGNTNAPTIMI 519
>sp|P18172|DHGL_DROPS Glucose dehydrogenase [acceptor] OS=Drosophila pseudoobscura
pseudoobscura GN=Gld PE=3 SV=4
Length = 625
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 144/575 (25%), Positives = 238/575 (41%), Gaps = 100/575 (17%)
Query: 42 AQPVSYYDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGS-PYGNPNITNLGSFGAALS 98
++P YD+I+IGGG+AG +A+ LS+ VLL+E GG P G + +F +
Sbjct: 59 SEPDYEYDFIVIGGGSAGSVVASRLSEVPQWKVLLIEAGGDEPVGAQIPSMFLNFIGSDI 118
Query: 99 DLSSTSPSQRFIS----EDGVINSRARVLGGGSCLNAGFYTRAAPYYVREV------GWD 148
D + +R E R +VLGG S +N Y R + GW
Sbjct: 119 DYRYNTEPERMACLSSMEQRCYWPRGKVLGGTSVMNGMMYIRGNREDYDDWAAQGNPGWS 178
Query: 149 ERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNG-FTYDHMY-GTKIGGTIF 206
+ V ++ E + + ++ + + GL+ VG PYN +Y + G ++G ++
Sbjct: 179 YQDVLPFFKKSEDNLELDAVGTEYHA--KGGLLPVGKFPYNPPLSYALLKAGEEMGFSVQ 236
Query: 207 DQNGQ--------RHTAADLLEYANP----------SGLTLLLHASVHKVLFRIKGKARP 248
D NGQ + TA + + Y++ + L +LL+ +V KVL K
Sbjct: 237 DLNGQNSTGFMIAQMTARNGIRYSSARAFLRPARMRNNLHILLNTTVTKVLIHPGTKN-- 294
Query: 249 VAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGAH--------NITVVL 300
GV D G+ + +K E+IVS GA+ SPQ+L+LSG N+ V
Sbjct: 295 -VVGVEVSDQFGSMRKILVKK----EVIVSGGAVNSPQILLLSGVGPKEDLQKVNVRPVH 349
Query: 301 DQPLVGQGMSDN---------------PMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAA 345
P VG+ + ++ P+N + L+ GI+ + A
Sbjct: 350 HLPGVGKNLHNHVAYFTNFFIDDADTAPLNWATAMEYLLFRDGLMSGTGISD----VTAK 405
Query: 346 SGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILE 405
+A P+ D ++ G L+ + E ++ N +A+ I
Sbjct: 406 MATRWA-DRPNLPDLQLYFG--GYLASCARTGQVGELLS---NNSRAIQ--------IFP 451
Query: 406 KVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYE 465
V+ P S G++ LR+ +P D P + NY + D++ V+GI ++ ++ S K
Sbjct: 452 AVLNPKSRGYITLRSADPLDPPRIFANYLTDERDVKTLVEGIKFAIRLSQT---SPLKQY 508
Query: 466 SMSVPILVNMTASAPVNLLPRHSNASTS-LEQFCRDTVMTIWHYHGGCQVG------KVV 518
M + V V H+ AS + E R H G C++G VV
Sbjct: 509 GMRLDKTV-------VKGCESHAFASDAYWECAVRQNTGPENHQAGSCKMGPSHDPMAVV 561
Query: 519 DHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMML 553
+H+ +V GV LRV+D S N A +M+
Sbjct: 562 NHELRVHGVRGLRVMDTSIMPKVTAGNTHAPAVMI 596
>sp|Q8UH55|BETA_AGRT5 Choline dehydrogenase OS=Agrobacterium tumefaciens (strain C58 /
ATCC 33970) GN=betA PE=3 SV=2
Length = 549
Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 140/565 (24%), Positives = 232/565 (41%), Gaps = 109/565 (19%)
Query: 49 DYIIIGGGTAGCPLAATLSQNA--SVLLLERGGSPYGNPNITNLGSFGAALS----DLSS 102
DY+I+G G+AG +A LS++ SV+++E GGS +G P I + +S +
Sbjct: 4 DYVIVGSGSAGSAIAYRLSEDGRYSVIVIEAGGSDFG-PFIQMPAALAWPMSMKRYNWGY 62
Query: 103 TSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRA-APYYVREVGWDE------------ 149
S + + + R +V+GG S +N Y R A + R W+E
Sbjct: 63 LSEPEPNLDNRRITAPRGKVIGGSSSINGLVYVRGHAEDFNR---WEELGAQGWAYADVL 119
Query: 150 ---RLVNESYQWVEKVVAFEPPMRQWQSAVRDGL----VEVGVLPYNGFTYDHMYGTKIG 202
+ + S+ E + P+ + V + L ++ G T D+ + G
Sbjct: 120 PYFKRMEHSHGGEEGWRGTDGPLHVQRGPVSNPLFHAFIQAGAQAGFELTDDYNGSKQEG 179
Query: 203 GTIFDQ---NGQRHTAAD-LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA 258
+ +Q NG+R +AA+ L+ A G L++ KV+ G+A V R
Sbjct: 180 FGLMEQTIHNGRRWSAANAYLKPALKRGNVTLVNGFARKVIIE-NGRAVGVEIERRGRVE 238
Query: 259 TGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG----AH----NITVVLDQPLVGQGMS 310
T +R E+IVSA + SP+LLMLSG AH I V D+P VG +
Sbjct: 239 TVKANR---------EVIVSASSFNSPKLLMLSGIGPAAHLKDMGIEVKADRPGVGANLQ 289
Query: 311 DNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENF---AGGSPSPRDY------- 360
D+ M F +VS V + + + +G + GG + +
Sbjct: 290 DH-MEFYFQ------QVSTKPVSLYSWLPWFWQGVAGAQWLLSKGGLGASNQFEACAFLR 342
Query: 361 ---GMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRG--GFILEKVMGPVSTGH 415
G+ P I Q +P +A + + A F+ G+ L K S G+
Sbjct: 343 SAPGLKQPDI-QYHFLP--------VAISYDGKAAAKSHGFQAHVGYNLSK-----SRGN 388
Query: 416 LELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNM 475
+ LR+ +P+D+P + FNY PED ++ + +I K+F F+
Sbjct: 389 VTLRSADPHDDPVIRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDDFR------------ 436
Query: 476 TASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK------VVDHDYKVLGVDA 529
P + ++ F R+ + + +H G C++G VVD + +V+GV+
Sbjct: 437 ---GPEIQPGENIETDEQIDAFLREHLESAYHPCGTCRMGDRNDPMAVVDPECRVIGVEG 493
Query: 530 LRVIDGSTFYYSPGTNPQATVMMLG 554
LRV D S F + N +M G
Sbjct: 494 LRVADSSIFPHVTYGNLNGPSIMTG 518
>sp|Q8D3K2|BETA_VIBVU Choline dehydrogenase OS=Vibrio vulnificus (strain CMCP6) GN=betA
PE=3 SV=1
Length = 560
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 149/582 (25%), Positives = 229/582 (39%), Gaps = 117/582 (20%)
Query: 47 YYDYIIIGGGTAGCPLAATLSQNA--SVLLLERGGSPYGNPNITNLGSFGAALS-DLSST 103
+YDYII+G G+AGC LA LS++ SVLLLE GGS + + ALS ++S
Sbjct: 4 HYDYIIVGAGSAGCVLADRLSESGDHSVLLLEAGGS-----DKSIFIQMPTALSYPMNSE 58
Query: 104 SPSQRFISE-----DG--VINSRARVLGGGSCLNAGFYTRAAPYYVREV------GWDER 150
+ +F ++ DG + R +VLGG S +N Y R E GW+ +
Sbjct: 59 KYAWQFETDAEADLDGRRLHCPRGKVLGGSSSINGMVYVRGHACDFDEWEEQGAKGWNYQ 118
Query: 151 LVNESYQWVEKVVAFEPPMRQWQS-----------------AVRDGLVEVG---VLPYNG 190
++ E + E R A D E G YNG
Sbjct: 119 ACLPYFRRAENWIDGEDEYRGGDGPLSTCAGNKMTLNPLYRAFIDAGKEAGYPETSDYNG 178
Query: 191 FTYD-----HMYGTKIGGTIFDQNGQRHTAAD--LLEYANPSGLTLLLHASVHKVLFRIK 243
+ + HM T+ +NG R + ++ L S L+ V ++L K
Sbjct: 179 YQQEGFGPMHM-------TV--KNGVRASTSNAYLSRAKKRSNFKLIKGVVVQRILLEEK 229
Query: 244 GKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHN 295
A GV F + G + KNE+I SAG++GS QLL LSG
Sbjct: 230 -----RAVGVEF-ELAGELRTCF----AKNEVISSAGSIGSVQLLQLSGIGPKTVLEKAG 279
Query: 296 ITVVLDQPLVGQGMSDNPMNAIF---VPSPVPVEVSLIQ----VVGITQFGSYIEAASGE 348
+T V P VGQ + D+ + F P+ + L ++G + +
Sbjct: 280 VTPVHHLPGVGQNLQDH-LEVYFQYHCQKPITLNGKLDWFSKGLIGAEWILTRKGLGATN 338
Query: 349 NFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVM 408
+F + G+ P I Q +P R + A D F+ K
Sbjct: 339 HFESCAFIRSRAGLKWPNI-QYHFLPAAMR--------YDGQAAFDGHGFQVHVGPNK-- 387
Query: 409 GPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMS 468
P S G +E+ + NP+D P + FNY D Q I +I+ + +F+ E +
Sbjct: 388 -PESRGRVEIVSANPSDKPKIQFNYLSTERDRQDWRDCIRLTREILAQPAMDEFRGEEIQ 446
Query: 469 VPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG------KVVDHDY 522
I V A ++Q+ ++ V + +H C++G V+D +
Sbjct: 447 PGINVATDA---------------EIDQWVKENVESAYHPSCSCKMGADDDPMAVLDEEC 491
Query: 523 KVLGVDALRVIDGSTFYYSPGTNPQA-TVMMLGRYVNLTTSK 563
+V G+ LRV+D S F P N A T+M+ R +L K
Sbjct: 492 RVRGITNLRVVDSSVFPTIPNGNLNAPTIMVAERAADLILHK 533
>sp|Q9X2M2|BETA_STAXY Choline dehydrogenase OS=Staphylococcus xylosus GN=betA PE=3 SV=1
Length = 560
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 144/568 (25%), Positives = 229/568 (40%), Gaps = 109/568 (19%)
Query: 48 YDYIIIGGGTAGCPLAATLSQNAS--VLLLERGGSPYGNPNITNLGSF-----GAALSDL 100
YDYIIIGGG+AG L LS++ S VL+LE G S Y + + + G L D
Sbjct: 5 YDYIIIGGGSAGSVLGGRLSEDVSNNVLVLEAGRSDYPWDLLIQMPAALMYPAGNKLYDW 64
Query: 101 SSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREVGWDERLVNESYQWVE 160
+ + + V ++R +VLGG S +N Y R P + W + ES+ +
Sbjct: 65 IYETTPEPHMDGRKVGHARGKVLGGSSSINGMIYQRGNPMDYEK--WAKPEGMESWDYAH 122
Query: 161 KVVAFE-----------PPMRQWQSAVR---------------DGLVEVG---VLPYNGF 191
+ F+ P R ++ D VE G NGF
Sbjct: 123 CLPYFKRLETTFGSKKGDPYRGHHGPIKLRRGPADNPLFQAFFDAGVEAGYNKTPDVNGF 182
Query: 192 TYDHMYGTKIGGTIFD---QNGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIKGKARP 248
+ G FD NG+R +A+ Y +P+ L + ++ +
Sbjct: 183 RQE-------GFGPFDSQVHNGRRVSASRA--YLHPAMKRKNLEVQTRAFVTKLNFEGNK 233
Query: 249 VAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGAHN--------ITVVL 300
V GV F+ G +H K E+I+S GA+ SPQLL LSG + I +
Sbjct: 234 VT-GVTFK-KNGKEHTESAK-----EVILSGGAINSPQLLQLSGIGDSEHLRSLGIEPRI 286
Query: 301 DQPLVGQGMSDNPMNAIFV----PSPVPVEVSLIQV----VGITQFGSYIEAASGENFAG 352
P VG+ D+ ++V PV ++ SL ++ +G+ AA+ +F G
Sbjct: 287 HLPGVGENFEDHL--EVYVQHACKQPVSMQPSLNKLKMPFIGLQWILGRKGAAASNHFEG 344
Query: 353 GSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVS 412
G + + P + +P IA + KA PA G + M S
Sbjct: 345 GGFVRSNDDVDYPNL-MFHFLP--------IAVRYDGTKA---PAAHGYQVHVGPMYSNS 392
Query: 413 TGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPIL 472
GHL++++++P + P FNY ED + V+ I I++ K+ F +S P
Sbjct: 393 RGHLKIKSKDPFEKPEFVFNYLSTEEDKREWVEAIKVARNILKQKALDPFNGGEIS-PGP 451
Query: 473 VNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG------KVVDHD-YKVL 525
T + + R + T+L C C++G VVD + +KV
Sbjct: 452 EVQTDEEIIEWVKR--DGETALHPSC------------SCRMGPASDEMSVVDPETFKVH 497
Query: 526 GVDALRVIDGSTFYYSPGTNPQATVMML 553
G++ LRV+D S + N + V+M+
Sbjct: 498 GMENLRVVDASVMPRTTNGNIHSPVLMM 525
>sp|Q48CM7|BETA_PSE14 Choline dehydrogenase OS=Pseudomonas syringae pv. phaseolicola
(strain 1448A / Race 6) GN=betA PE=3 SV=1
Length = 568
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 145/573 (25%), Positives = 233/573 (40%), Gaps = 107/573 (18%)
Query: 46 SYYDYIIIGGGTAGCPLAATLSQNA--SVLLLERGGSPYGNPNITNLGSFGAALS----- 98
S YDYIIIG G+AG LAA L+++A +VLLLE GG Y + AAL+
Sbjct: 5 SEYDYIIIGAGSAGNTLAARLTEDAGVTVLLLEAGGPDY---RLDFRTQMPAALAFPLQG 61
Query: 99 ---DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRA------------------ 137
+ + + + ++ + R + LGG S +N Y R
Sbjct: 62 RRYNWAYETEPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDYDGWAKEPGLEDWS 121
Query: 138 ----APYY----VREVGWDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYN 189
PY+ R++G ++ E V K A P+ +VE GV
Sbjct: 122 YLDCLPYFRKAETRDIGPNDYHGGEGPVSVTKPKAGNNPLFH-------AMVEAGV--QA 172
Query: 190 GF-TYDHMYGTKIGG-----TIFDQNGQRHTAAD--LLEYANPSGLTLLLHASVHKVLFR 241
GF D + G + G NG+R + A L E S LT++ HA ++LF
Sbjct: 173 GFPRTDDLNGYQQEGFGPMDRTVTPNGRRASTARGYLDEAKKRSTLTIVTHALTDRILFE 232
Query: 242 IKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGAH------- 294
K +A VA+ V D T + RA + E+++ GA+ SPQ+L SG
Sbjct: 233 GK-RAVGVAYLVGDSD-TRIQARA------RKEVLLCGGAIASPQILQRSGVGPAEVLNK 284
Query: 295 -NITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGEN--FA 351
+I VV D P VGQ + D+ + PV + + + A G F
Sbjct: 285 LDIPVVHDLPGVGQNLQDHLEMYLQYACTQPVSL-------YPSLKWWNQPAIGAKWMFL 337
Query: 352 G---GSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVM 408
G G+ + + G F + + + P Q +A K + + F+ M
Sbjct: 338 GTGIGASNQFEAGGFI-RSSEAFEWPNIQYHFLPVAINYNGTKGVQEHGFQAHV---GSM 393
Query: 409 GPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMS 468
S G +++++++P + PS+ FNY +D Q GI +I++ + ++ +S
Sbjct: 394 RSPSRGRVQVKSKDPREYPSILFNYMSSEQDWQEFRDGIRLTREIMQQPALDPYRGREIS 453
Query: 469 VPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK----VVDHDYKV 524
I V + +L+QF R+ T +H C++G VVD +V
Sbjct: 454 PGIDV---------------QSDEALDQFVREHAETAYHPSCSCKMGTDEMAVVDGQGRV 498
Query: 525 LGVDALRVIDGSTFYYSPGTNPQATVMMLGRYV 557
G+ +LRV+D S N A +M+ +
Sbjct: 499 HGLQSLRVVDASIMPIITTGNLNAPTIMIAEKI 531
>sp|Q7MF12|BETA_VIBVY Choline dehydrogenase OS=Vibrio vulnificus (strain YJ016) GN=betA
PE=3 SV=1
Length = 560
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 149/582 (25%), Positives = 228/582 (39%), Gaps = 117/582 (20%)
Query: 47 YYDYIIIGGGTAGCPLAATLSQNA--SVLLLERGGSPYGNPNITNLGSFGAALS-DLSST 103
+YDYII+G G+AGC LA LS++ SVLLLE GGS + + ALS ++S
Sbjct: 4 HYDYIIVGAGSAGCVLADRLSESGDHSVLLLEAGGS-----DKSIFIQMPTALSYPMNSE 58
Query: 104 SPSQRFISE-----DG--VINSRARVLGGGSCLNAGFYTRAAPYYVREV------GWDER 150
+ +F ++ DG + R +VLGG S +N Y R E GW+ +
Sbjct: 59 KYAWQFETDAEADLDGRRLHCPRGKVLGGSSSINGMVYVRGHACDFDEWEEQGAKGWNYQ 118
Query: 151 LVNESYQWVEKVVAFEPPMRQWQS-----------------AVRDGLVEVG---VLPYNG 190
++ E + E R A D E G YNG
Sbjct: 119 ACLPYFRRAENWIDGEDEYRGGDGPLSTCAGNKMTLNPLYRAFIDAGKEAGYPETSDYNG 178
Query: 191 FTYD-----HMYGTKIGGTIFDQNGQRHTAAD--LLEYANPSGLTLLLHASVHKVLFRIK 243
+ + HM T+ +NG R + ++ L S L+ V ++L K
Sbjct: 179 YQQEGFGPMHM-------TV--KNGVRASTSNAYLSRAKKRSNFKLIKGVVVQRILLEEK 229
Query: 244 GKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHN 295
A GV F + G + KNE+I SAG++GS QLL LSG
Sbjct: 230 -----RAVGVEF-ELAGELRTCF----AKNEVISSAGSIGSVQLLQLSGIGPKTVLEKAG 279
Query: 296 ITVVLDQPLVGQGMSDNPMNAIF---VPSPVPVEVSLIQ----VVGITQFGSYIEAASGE 348
+T V P VGQ + D+ + F P+ + L ++G + +
Sbjct: 280 VTPVYHLPGVGQNLQDH-LEVYFQYHCQKPITLNGKLDWFSKGLIGTEWILTRKGLGATN 338
Query: 349 NFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVM 408
+F + G+ P I Q +P R + A D F+ K
Sbjct: 339 HFESCAFIRSRAGLKWPNI-QYHFLPAAMR--------YDGQAAFDGHGFQVHVGPNK-- 387
Query: 409 GPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMS 468
P S G +E+ + NP D P + FNY D Q I +I+ + +F+ E +
Sbjct: 388 -PESRGRVEIVSANPLDKPKIQFNYLSTERDRQDWRDCIRLTREILAQPAMDEFRGEEIQ 446
Query: 469 VPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG------KVVDHDY 522
I V A ++Q+ ++ V + +H C++G V+D +
Sbjct: 447 PGINVATDA---------------EIDQWVKENVESAYHPSCSCKMGADDDPMAVLDEEC 491
Query: 523 KVLGVDALRVIDGSTFYYSPGTNPQA-TVMMLGRYVNLTTSK 563
+V G+ LRV+D S F P N A T+M+ R +L K
Sbjct: 492 RVRGITNLRVVDSSVFPTIPNGNLNAPTIMVAERAADLILHK 533
>sp|Q8NE62|CHDH_HUMAN Choline dehydrogenase, mitochondrial OS=Homo sapiens GN=CHDH PE=2
SV=2
Length = 594
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 144/567 (25%), Positives = 220/567 (38%), Gaps = 105/567 (18%)
Query: 48 YDYIIIGGGTAGCPLAATLSQNAS--VLLLERG------GSPYGNPNITNLGSFGAALSD 99
Y Y+++G G+AGC LA L+++ + VLLLE G GS + I + A L D
Sbjct: 41 YSYVVVGAGSAGCVLAGRLTEDPAERVLLLEAGPKDVLAGSKRLSWKIHMPAALVANLCD 100
Query: 100 ----LSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRA-APYYVR-----EVGWDE 149
+ QR + + R RV GG S LNA Y R A Y R GWD
Sbjct: 101 DRYNWCYHTEVQRGLDGRVLYWPRGRVWGGSSSLNAMVYVRGHAEDYERWQRQGARGWD- 159
Query: 150 RLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNG-FTYDHMYGTKIGG----- 203
+ K E +++ A DG + V N + T+ G
Sbjct: 160 --YAHCLPYFRKAQGHELGASRYRGA--DGPLRVSRGKTNHPLHCAFLEATQQAGYPLTE 215
Query: 204 --TIFDQNGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGA 261
F Q G + E S LH ++ + +K +A + V+F + T A
Sbjct: 216 DMNGFQQEGFGWMDMTIHEGKRWSAACAYLHPALSRT--NLKAEAETLVSRVLF-EGTRA 272
Query: 262 KHRAYLKNGPKN------EIIVSAGALGSPQLLMLSGAHN--------ITVVLDQPLVGQ 307
Y+KNG + E+I+S GA+ SPQLLMLSG N I VV P VGQ
Sbjct: 273 VGVEYVKNGQSHRAYASKEVILSGGAINSPQLLMLSGIGNADDLKKLGIPVVCHLPGVGQ 332
Query: 308 GMSDNPMNAIFVPSPVPVEVSLIQ------VVGITQFGSYI-EAASGENFAGG------- 353
+ D+ I P+ + Q +G+ + E A+ GG
Sbjct: 333 NLQDHLEIYIQQACTRPITLHSAQKPLRKVCIGLEWLWKFTGEGATAHLETGGFIRSQPG 392
Query: 354 SPSPRDYGMFSP-KIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVS 412
P P F P ++ +VP +Q EA + M+ S
Sbjct: 393 VPHPDIQFHFLPSQVIDHGRVPTQQ---EAYQVHVGPMRG------------------TS 431
Query: 413 TGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPIL 472
G L+LR+ NP D+P + NY D++ + +I ++ + F+ + +
Sbjct: 432 VGWLKLRSANPQDHPVIQPNYLSTETDIEDFRLCVKLTREIFAQEALAPFRGKELQ---- 487
Query: 473 VNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK------VVDHDYKVLG 526
P + H + ++ F R + +H C++G+ VVD +VLG
Sbjct: 488 -------PGS----HIQSDKEIDAFVRAKADSAYHPSCTCKMGQPSDPTAVVDPQTRVLG 536
Query: 527 VDALRVIDGSTFYYSPGTNPQATVMML 553
V+ LRV+D S N A +M+
Sbjct: 537 VENLRVVDASIMPSMVSGNLNAPTIMI 563
>sp|Q985M5|BETA_RHILO Choline dehydrogenase OS=Rhizobium loti (strain MAFF303099) GN=betA
PE=3 SV=1
Length = 550
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 140/559 (25%), Positives = 220/559 (39%), Gaps = 97/559 (17%)
Query: 49 DYIIIGGGTAGCPLAATLSQNA--SVLLLERGGSPYG----NPNITNLGSFGAALSDLSS 102
D++IIG G+AG +A LS++ SV+++E GGS G P+ ++ +L D
Sbjct: 5 DFVIIGSGSAGSAMAYRLSEDGKHSVIVIEFGGSDIGPLIQMPSALSI-PLNMSLYDWGF 63
Query: 103 TSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAP----YYVRE--VGWDERLVNESY 156
S + + + R +V+GG S +N Y R ++ E GW V +
Sbjct: 64 ASEPEPHLGGRVLATPRGKVIGGSSSINGMVYVRGHARDFDHWAEEGATGWGFADVLPYF 123
Query: 157 QWVEKVVAFEPPMR------QWQSAVRD-----GLVEVGVLPYNGFTYDHMYGTKIGGTI 205
+ +E E R Q R VE G T D+ + G
Sbjct: 124 KRMEDNDGGEDGWRGHGGPLHVQRGSRKNPLYGAFVEAGRQAGFELTDDYNGSKQEGFGP 183
Query: 206 FDQN---GQRHTAADLLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAK 262
+Q G+R +AA Y P A K + +KG AR V + + A G +
Sbjct: 184 MEQTISGGRRWSAASA--YLKP--------ALKRKNVSLVKGFARRVI--IENQRAIGVE 231
Query: 263 ---HRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSD 311
H+ + E+IV+A ++ SP++LMLSG + I VV D+P VG+ + D
Sbjct: 232 IEAHKQIQVVKARREVIVAASSINSPKILMLSGIGPAEHLRENGIAVVADRPGVGRNLQD 291
Query: 312 NPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDY----------G 361
+ I S P+ ++ + + F + A F G + + G
Sbjct: 292 HMELYIQQESTKPITLNSV----LNPFSKALIGAQWLFFKSGLGATNHFEAAAFVRSRAG 347
Query: 362 MFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELRTR 421
+ P I Q +P R A +A P M S G + LR+
Sbjct: 348 VDYPDI-QYHFIPAAVRYDGKAAAKSHGFQAHVGP-----------MRSKSRGSVTLRSP 395
Query: 422 NPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPV 481
+P P + FNY P+D I +I +F F+ + +S P
Sbjct: 396 DPKAKPVIRFNYMSHPDDWTEFRHCIRLTREIFGQSAFDAFRGQEIS-----------PG 444
Query: 482 NLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK------VVDHDYKVLGVDALRVIDG 535
+ H + L+ F RD + +H G C++G+ VVD + +V+GVD LRV D
Sbjct: 445 S----HVQSDDDLDVFIRDHAESAYHPCGTCKMGRADDVTSVVDPECRVIGVDGLRVADS 500
Query: 536 STFYYSPGTNPQATVMMLG 554
S F N A +M G
Sbjct: 501 SIFPRVTNGNLNAPSIMTG 519
>sp|Q4ZM63|BETA_PSEU2 Choline dehydrogenase OS=Pseudomonas syringae pv. syringae (strain
B728a) GN=betA PE=3 SV=1
Length = 568
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 142/568 (25%), Positives = 235/568 (41%), Gaps = 97/568 (17%)
Query: 46 SYYDYIIIGGGTAGCPLAATLSQNA--SVLLLERGGSPYGNPNITNLGSFGAALS----- 98
S YDYIIIG G+AG LAA L+++A +VLLLE GG Y + AAL+
Sbjct: 5 SEYDYIIIGAGSAGNTLAARLTEDAGVTVLLLEAGGPDY---RLDFRTQMPAALAFPLQG 61
Query: 99 ---DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREVGWDERLVNES 155
+ + + + ++ + R + LGG S +N Y R + GW + E
Sbjct: 62 RRYNWAYETEPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNA--MDYDGWAKEPGLED 119
Query: 156 YQWVEKVVAF----------------EPPM-----RQWQSAVRDGLVEVGVLPYNGF-TY 193
+ +++ + F E P+ + + + +VE GV GF
Sbjct: 120 WSYLDCLPYFRKAETRDIGPNDYHGGEGPVSVTTPKAGNNPLFHAMVEAGV--QAGFPRT 177
Query: 194 DHMYGTKIGG-----TIFDQNGQRHTAAD--LLEYANPSGLTLLLHASVHKVLFRIKGKA 246
D + G + G NG+R + A L E S LT++ HA ++LF K +A
Sbjct: 178 DDLNGYQQEGFGPMDRTVTPNGRRASTARGYLDEAKKRSTLTIVTHALTDRILFEGK-RA 236
Query: 247 RPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGAH--------NITV 298
VA+ V D T + RA + E+++ GA+ SPQ+L SG +I V
Sbjct: 237 VGVAYLVGDSD-TRIQARA------RKEVLLCGGAIASPQILQRSGVGPAEVLNKLDIPV 289
Query: 299 VLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGEN--FAG---G 353
V D P VGQ + D+ + PV + + + A G F G G
Sbjct: 290 VHDLPGVGQNLQDHLEMYLQYACTQPVSL-------YPSLKWWNQPAIGAEWMFLGTGIG 342
Query: 354 SPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVST 413
+ + + G F + + + P Q +A K + + F+ M S
Sbjct: 343 ASNQFEAGGFI-RSSEAFEWPNIQYHFLPVAINYNGTKGVQEHGFQAHV---GSMRSPSR 398
Query: 414 GHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILV 473
G +++++++P + PS+ FNY +D Q GI +I++ + ++ +S I V
Sbjct: 399 GRVQVKSKDPREYPSILFNYMASEQDWQEFRDGIRLTREIMQQPALDPYRGREISPGIDV 458
Query: 474 NMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK----VVDHDYKVLGVDA 529
+ +L+QF R+ T +H C++G VVD +V G+ +
Sbjct: 459 ---------------QSDEALDQFVREHAETAYHPSCSCKMGTDEMAVVDGQGRVHGLQS 503
Query: 530 LRVIDGSTFYYSPGTNPQATVMMLGRYV 557
LRV+D S N A +M+ +
Sbjct: 504 LRVVDASIMPIITTGNLNAPTIMIAEKI 531
>sp|P18173|DHGL_DROME Glucose dehydrogenase [acceptor] OS=Drosophila melanogaster GN=Gld
PE=3 SV=3
Length = 625
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 135/575 (23%), Positives = 234/575 (40%), Gaps = 100/575 (17%)
Query: 42 AQPVSYYDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSPYGNPNITN--LGSFGAAL 97
++P YD+I+IGGG+AG +A+ LS+ VLL+E GG I + L G+ +
Sbjct: 59 SEPDYEYDFIVIGGGSAGSVVASRLSEVPQWKVLLIEAGGDEPVGAQIPSMFLNFIGSDI 118
Query: 98 SDLSSTSPSQRFI---SEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREV------GWD 148
+T P E R +VLGG S LN Y R + GW
Sbjct: 119 DYRYNTEPEPMACLSSMEQRCYWPRGKVLGGTSVLNGMMYVRGNREDYDDWAADGNPGWA 178
Query: 149 ERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYN-GFTYDHMY-GTKIGGTIF 206
V ++ E + + ++ + + GL+ VG PYN +Y + G ++G ++
Sbjct: 179 YNDVLPFFKKSEDNLDLDEVGTEYHA--KGGLLPVGKFPYNPPLSYAILKAGEELGFSVH 236
Query: 207 DQNGQ--------RHTAADLLEYANP----------SGLTLLLHASVHKVLFRIKGKARP 248
D NGQ + TA + + Y++ + L +LL+ + K+L K
Sbjct: 237 DLNGQNSTGFMIAQMTARNGIRYSSARAFLRPARMRNNLHILLNTTATKILIHPHTKN-- 294
Query: 249 VAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGAH--------NITVVL 300
GV D G+ + + K E+++SAGA+ SP +L+LSG N+ V
Sbjct: 295 -VLGVEVSDQFGSTRKILV----KKEVVLSAGAVNSPHILLLSGVGPKDELQQVNVRTVH 349
Query: 301 DQPLVGQGMSDN---------------PMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAA 345
+ P VG+ + ++ P+N + L+ GI+ + A
Sbjct: 350 NLPGVGKNLHNHVTYFTNFFIDDADTAPLNWATAMEYLLFRDGLMSGTGISD----VTAK 405
Query: 346 SGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILE 405
+A SP D ++ G L+ + E ++ +++ I
Sbjct: 406 LATRYA-DSPERPDLQLYFG--GYLASCARTGQVGELLSNNSRSIQ-----------IFP 451
Query: 406 KVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYE 465
V+ P S G + LR+ +P + P + NY +D++ V+GI + ++ ++ ++
Sbjct: 452 AVLNPRSRGFIGLRSADPLEPPRIVANYLTHEQDVKTLVEGIKFVIRLSQTTPLKQY--- 508
Query: 466 SMSVPILVNMTASAPVNLLPRHSNASTS-LEQFCRDTVMTIWHYHGGCQVG------KVV 518
M + V A H+ S + E R H G C++G VV
Sbjct: 509 GMRLDKTVVKGCEA-------HAFGSDAYWECAVRQNTGPENHQAGSCKMGPSHDPMAVV 561
Query: 519 DHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMML 553
+H+ +V G+ LRV+D S N A +M+
Sbjct: 562 NHELRVHGIRGLRVMDTSIMPKVSSGNTHAPAVMI 596
>sp|A6T613|BETA_KLEP7 Choline dehydrogenase OS=Klebsiella pneumoniae subsp. pneumoniae
(strain ATCC 700721 / MGH 78578) GN=betA PE=3 SV=1
Length = 554
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 142/567 (25%), Positives = 227/567 (40%), Gaps = 105/567 (18%)
Query: 48 YDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSPYGNPNITNLGSF------GAALSD 99
+DYIIIG G+AG LA L++ N +VLLLE GG Y T + + G +
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAYPLQGKRYNW 62
Query: 100 LSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAA--------------------- 138
T P + +++ + R + LGG S +N Y R
Sbjct: 63 AYETEP-EPYMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLDNWAKEPGLEHWSYLDC 121
Query: 139 -PYY----VREVGWDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFTY 193
PYY R++G ++ Y + V+ P + + + + +VE GV T
Sbjct: 122 LPYYRKAETRDIGPND------YHGGDGPVSVTTP-KPGNNPLFEAMVEAGVQAGYPRT- 173
Query: 194 DHMYGTKIGG------TIFDQNGQRHTAADLLEYANPS-GLTLLLHASVHKVLFRIKGKA 246
D + G + G T+ Q + TA L+ A LT+ HA ++F K
Sbjct: 174 DDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQARGRPNLTIRTHALTDHIIFAGK--- 230
Query: 247 RPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGAHN--------ITV 298
A GV + + N E+++ AGA+ SPQ+L SG N I V
Sbjct: 231 --RAVGVEWLEGESTIPSKATAN---KEVLLCAGAIASPQILQRSGVGNPELLRQFDIPV 285
Query: 299 VLDQPLVGQGMSDNPMNAIFVPSPVPVEV-------SLIQVVGITQFGSYIEAASGENFA 351
V D P VG+ + D+ + PV + + ++ FG AS + A
Sbjct: 286 VHDLPGVGENLQDHLEMYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGIGASNQFEA 345
Query: 352 GGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPV 411
GG R + P I Q +P +A A+ + F+ M
Sbjct: 346 GGFIRSRAEFAW-PNI-QYHFLP--------VAINYNGSNAVKEHGFQCHV---GSMRSP 392
Query: 412 STGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPI 471
S GH+ L++R+P+ +P++ FNY +D Q I +I+ + K++ +S I
Sbjct: 393 SRGHVRLKSRDPHAHPAILFNYMSHEQDWQEFRDAIRITREIMNQPALDKYRGREISPGI 452
Query: 472 LVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG----KVVDHDYKVLGV 527
+ L++F R+ T +H G C++G VVD + +V G+
Sbjct: 453 ---------------ECQSDAELDEFVRNHAETAFHPCGTCKMGYDEMAVVDGEGRVHGL 497
Query: 528 DALRVIDGSTFYYSPGTNPQATVMMLG 554
+ LRV+D S N AT +M+G
Sbjct: 498 EGLRVVDASIMPQIITGNLNATTIMIG 524
>sp|Q8BJ64|CHDH_MOUSE Choline dehydrogenase, mitochondrial OS=Mus musculus GN=Chdh PE=1
SV=1
Length = 596
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 144/558 (25%), Positives = 227/558 (40%), Gaps = 87/558 (15%)
Query: 48 YDYIIIGGGTAGCPLAATLSQ--NASVLLLERG------GSPYGNPNITNLGSFGAALSD 99
Y ++++G G+AGC LA+ L++ N VLLLE G GS I + + L D
Sbjct: 43 YTFVVVGAGSAGCVLASRLTEDPNHRVLLLEAGPKDLLMGSKRLQWKIHMPAALVSNLCD 102
Query: 100 LS-----STSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRA-APYYVREVGWDERLVN 153
T P Q + + R RV GG S LNA Y R A Y R W R
Sbjct: 103 DKYNWYYHTEP-QPGMDSRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNR---W-HREGA 157
Query: 154 ESYQWVEKVVAFEPPMRQWQSAVR----DGLVEVGVLPYNGFTYD-HMYGTKIGGTIF-- 206
E + + + F R A DG + V N + + + G F
Sbjct: 158 EGWDYAHCLPYFRKAQRHELGANMYRGGDGPLHVSRGKTNHPLHQAFLQAARQAGYPFTE 217
Query: 207 DQNGQRHTAADLLEYANPSGLTL-LLHASVHKVLFR--IKGKARPVAHGVVFRDATGAKH 263
D NG + ++ G A +H VL R ++ + + + V+F + T A
Sbjct: 218 DMNGFQQEGFGWMDMTVHQGKRWSTACAYLHPVLSRPNLRAEVQTLVSRVLF-EGTRAVG 276
Query: 264 RAYLKNGPKN------EIIVSAGALGSPQLLMLSGAHN--------ITVVLDQPLVGQGM 309
Y+K+G ++ E+I+S GA+ SPQLLMLSG N I VV P VGQ +
Sbjct: 277 VEYIKDGQRHKAYVSREVILSGGAINSPQLLMLSGVGNADDLRKLDIPVVCHLPGVGQNL 336
Query: 310 SDNPMNAIFVPSPVPVEVSLIQ------VVGITQFGSYI-EAASGENFAGGSPSPRDYGM 362
D+ + P+ + Q +G+ SY + A+ GG R G+
Sbjct: 337 QDHLEVYVQQACTQPITLHSAQKPLRKVCIGLEWLWSYTGDGATAHLETGGFIRSRP-GV 395
Query: 363 FSPKIGQLSKVPPKQRTPEAIAEAIEN-MKALDDPAFRGGFILEKVMGPVSTGHLELRTR 421
P I Q +P ++ I++ K A++ + M S G L+LR+
Sbjct: 396 PHPDI-QFHFLP---------SQVIDHGRKPTQQEAYQ---VHVGTMRATSVGWLKLRSA 442
Query: 422 NPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPV 481
NP D+P + NY D++ Q + +I ++ + F+ + + P
Sbjct: 443 NPRDHPVIHPNYLSTETDVEDFRQCVRLSREIFAQEALAPFRGKELQ-----------PG 491
Query: 482 NLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK------VVDHDYKVLGVDALRVIDG 535
+ H + ++ F R + +H C++G+ VVD KV+GV+ LRV+D
Sbjct: 492 S----HVQSDKEIDAFVRAKADSAYHPSCTCKMGRSSDPTAVVDAQTKVIGVENLRVVDA 547
Query: 536 STFYYSPGTNPQATVMML 553
S N A +M+
Sbjct: 548 SIMPSVVSGNLNAPTVMI 565
>sp|B0V945|BETA_ACIBY Choline dehydrogenase OS=Acinetobacter baumannii (strain AYE)
GN=betA PE=3 SV=1
Length = 552
Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 140/573 (24%), Positives = 232/573 (40%), Gaps = 104/573 (18%)
Query: 45 VSYYDYIIIGGGTAGCPLAATLSQN--ASVLLLERGGSPYGNPNITNLGSFGAALS---- 98
+ YDYIIIG G+AG LAA L+++ +VLLLE GG Y + AAL+
Sbjct: 3 IKEYDYIIIGAGSAGNVLAARLTEDKDTTVLLLEAGGPDY---RLDFRTQMPAALAYPLQ 59
Query: 99 ----DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAA---------------- 138
+ + + + ++ + R + LGG S +N Y R
Sbjct: 60 GRRYNWAYLTDPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLEQWATHKGLENW 119
Query: 139 ------PYY----VREVGWDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPY 188
PYY R++G ++ Y V+ P + + + +VE GV
Sbjct: 120 TYADCLPYYKKAETRDIGGND------YHGDSGPVSVATP-KNGNNVLFHAMVEAGVQAG 172
Query: 189 NGFTYDHMYGTKIGG------TIFDQNGQRHTAADLLEYANPS-GLTLLLHASVHKVLFR 241
T D + G + G T+ + + TA L+ A LT+L HA+ +K+LF
Sbjct: 173 YPRT-DDLNGYQQEGFGPMDRTVTPKGRRSSTARGYLDMAKGRPNLTILTHATTNKILFN 231
Query: 242 IKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------A 293
K A GV + GA + K E+++ AGA+ SPQ+L SG +
Sbjct: 232 QK-----QAIGVEY--IIGADQNNLQRALVKREVLLCAGAIASPQILQRSGVGQSTFLKS 284
Query: 294 HNITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGEN--FA 351
+I VV D P VG+ + D+ +++ VSL + Y + A G F
Sbjct: 285 MDIDVVHDLPGVGENLQDHL--EMYLQYKCKQPVSLYPALKW-----YNQPAIGAEWLFN 337
Query: 352 G---GSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVM 408
G G+ + + G F + K P Q +A A+ + F+ M
Sbjct: 338 GTGIGASNQFEAGGFIRSSDEF-KWPNIQYHFLPVAINYNGSNAVKEHGFQAHV---GSM 393
Query: 409 GPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMS 468
S G ++L++++P +PS+ FNY +D + I +I+ + ++ + +S
Sbjct: 394 RSPSRGRIKLKSKDPFAHPSILFNYMSTEQDWREFRDAIRITREIMHQPALDPYRGDEIS 453
Query: 469 VPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK----VVDHDYKV 524
+H L+ F R+ T +H C++G+ VVD +V
Sbjct: 454 P---------------GKHLQTDAELDDFVRNHAETAYHPSCSCKMGEDEMAVVDGQGRV 498
Query: 525 LGVDALRVIDGSTFYYSPGTNPQATVMMLGRYV 557
G++ LRV+D S N AT +M+ +
Sbjct: 499 HGMNGLRVVDASIMPLIITGNLNATTIMIAEKI 531
>sp|B0VST3|BETA_ACIBS Choline dehydrogenase OS=Acinetobacter baumannii (strain SDF)
GN=betA PE=3 SV=1
Length = 552
Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 140/573 (24%), Positives = 232/573 (40%), Gaps = 104/573 (18%)
Query: 45 VSYYDYIIIGGGTAGCPLAATLSQN--ASVLLLERGGSPYGNPNITNLGSFGAALS---- 98
+ YDYIIIG G+AG LAA L+++ +VLLLE GG Y + AAL+
Sbjct: 3 IKEYDYIIIGAGSAGNVLAARLTEDKDTTVLLLEAGGPDY---RLDFRTQMPAALAYPLQ 59
Query: 99 ----DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAA---------------- 138
+ + + + ++ + R + LGG S +N Y R
Sbjct: 60 GRRYNWAYLTDPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLEQWATHKGLENW 119
Query: 139 ------PYY----VREVGWDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPY 188
PYY R++G ++ Y V+ P + + + +VE GV
Sbjct: 120 TYADCLPYYKKAETRDIGGND------YHGDSGPVSVATP-KNGNNVLFHAMVEAGVQAG 172
Query: 189 NGFTYDHMYGTKIGG------TIFDQNGQRHTAADLLEYANPS-GLTLLLHASVHKVLFR 241
T D + G + G T+ + + TA L+ A LT+L HA+ +K+LF
Sbjct: 173 YPRT-DDLNGYQQEGFGPMDRTVTPKGRRSSTARGYLDMAKGRPNLTILTHATTNKILFN 231
Query: 242 IKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------A 293
K A GV + GA + K E+++ AGA+ SPQ+L SG +
Sbjct: 232 QK-----QAIGVEY--IIGADQNNLQRALVKREVLLCAGAIASPQILQRSGVGQSTFLKS 284
Query: 294 HNITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGEN--FA 351
+I VV D P VG+ + D+ +++ VSL + Y + A G F
Sbjct: 285 MDIDVVHDLPGVGENLQDHL--EMYLQYKCKQPVSLYPALKW-----YNQPAIGAEWLFN 337
Query: 352 G---GSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVM 408
G G+ + + G F + K P Q +A A+ + F+ M
Sbjct: 338 GTGIGASNQFEAGGFIRSSDEF-KWPNIQYHFLPVAINYNGSNAVKEHGFQAHV---GSM 393
Query: 409 GPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMS 468
S G ++L++++P +PS+ FNY +D + I +I+ + ++ + +S
Sbjct: 394 RSPSRGRIKLKSKDPFAHPSILFNYMSTEQDWREFRDAIRITREIMHQPALDPYRGDEIS 453
Query: 469 VPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK----VVDHDYKV 524
+H L+ F R+ T +H C++G+ VVD +V
Sbjct: 454 P---------------GKHLQTDAELDDFVRNHAETAYHPSCSCKMGEDEMAVVDGQGRV 498
Query: 525 LGVDALRVIDGSTFYYSPGTNPQATVMMLGRYV 557
G++ LRV+D S N AT +M+ +
Sbjct: 499 HGMNGLRVVDASIMPLIITGNLNATTIMIAEKI 531
>sp|B2HV79|BETA_ACIBC Choline dehydrogenase OS=Acinetobacter baumannii (strain ACICU)
GN=betA PE=3 SV=1
Length = 552
Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 140/573 (24%), Positives = 232/573 (40%), Gaps = 104/573 (18%)
Query: 45 VSYYDYIIIGGGTAGCPLAATLSQN--ASVLLLERGGSPYGNPNITNLGSFGAALS---- 98
+ YDYIIIG G+AG LAA L+++ +VLLLE GG Y + AAL+
Sbjct: 3 IKEYDYIIIGAGSAGNVLAARLTEDKDTTVLLLEAGGPDY---RLDFRTQMPAALAYPLQ 59
Query: 99 ----DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAA---------------- 138
+ + + + ++ + R + LGG S +N Y R
Sbjct: 60 GRRYNWAYLTDPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLEQWATHKGLENW 119
Query: 139 ------PYY----VREVGWDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPY 188
PYY R++G ++ Y V+ P + + + +VE GV
Sbjct: 120 TYADCLPYYKKAETRDIGGND------YHGDSGPVSVATP-KNGNNVLFHAMVEAGVQAG 172
Query: 189 NGFTYDHMYGTKIGG------TIFDQNGQRHTAADLLEYANPS-GLTLLLHASVHKVLFR 241
T D + G + G T+ + + TA L+ A LT+L HA+ +K+LF
Sbjct: 173 YPRT-DDLNGYQQEGFGPMDRTVTPKGRRSSTARGYLDMAKGRPNLTILTHATTNKILFN 231
Query: 242 IKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------A 293
K A GV + GA + K E+++ AGA+ SPQ+L SG +
Sbjct: 232 QK-----QAIGVEY--IIGADQNNLQRALVKREVLLCAGAIASPQILQRSGVGQSTFLKS 284
Query: 294 HNITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGEN--FA 351
+I VV D P VG+ + D+ +++ VSL + Y + A G F
Sbjct: 285 MDIDVVHDLPGVGENLQDHL--EMYLQYKCKQPVSLYPALKW-----YNQPAIGAEWLFN 337
Query: 352 G---GSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVM 408
G G+ + + G F + K P Q +A A+ + F+ M
Sbjct: 338 GTGIGASNQFEAGGFIRSSDEF-KWPNIQYHFLPVAINYNGSNAVKEHGFQAHV---GSM 393
Query: 409 GPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMS 468
S G ++L++++P +PS+ FNY +D + I +I+ + ++ + +S
Sbjct: 394 RSPSRGRIKLKSKDPFAHPSILFNYMSTEQDWREFRDAIRITREIMHQPALDPYRGDEIS 453
Query: 469 VPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK----VVDHDYKV 524
+H L+ F R+ T +H C++G+ VVD +V
Sbjct: 454 P---------------GKHLQTDAELDDFVRNHAETAYHPSCSCKMGEDEMAVVDGQGRV 498
Query: 525 LGVDALRVIDGSTFYYSPGTNPQATVMMLGRYV 557
G++ LRV+D S N AT +M+ +
Sbjct: 499 HGMNGLRVVDASIMPLIITGNLNATTIMIAEKI 531
>sp|B7I895|BETA_ACIB5 Choline dehydrogenase OS=Acinetobacter baumannii (strain AB0057)
GN=betA PE=3 SV=1
Length = 552
Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 140/573 (24%), Positives = 232/573 (40%), Gaps = 104/573 (18%)
Query: 45 VSYYDYIIIGGGTAGCPLAATLSQN--ASVLLLERGGSPYGNPNITNLGSFGAALS---- 98
+ YDYIIIG G+AG LAA L+++ +VLLLE GG Y + AAL+
Sbjct: 3 IKEYDYIIIGAGSAGNVLAARLTEDKDTTVLLLEAGGPDY---RLDFRTQMPAALAYPLQ 59
Query: 99 ----DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAA---------------- 138
+ + + + ++ + R + LGG S +N Y R
Sbjct: 60 GRRYNWAYLTDPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLEQWATHKGLENW 119
Query: 139 ------PYY----VREVGWDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPY 188
PYY R++G ++ Y V+ P + + + +VE GV
Sbjct: 120 TYADCLPYYKKAETRDIGGND------YHGDSGPVSVATP-KNGNNVLFHAMVEAGVQAG 172
Query: 189 NGFTYDHMYGTKIGG------TIFDQNGQRHTAADLLEYANPS-GLTLLLHASVHKVLFR 241
T D + G + G T+ + + TA L+ A LT+L HA+ +K+LF
Sbjct: 173 YPRT-DDLNGYQQEGFGPMDRTVTPKGRRSSTARGYLDMAKGRPNLTILTHATTNKILFN 231
Query: 242 IKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------A 293
K A GV + GA + K E+++ AGA+ SPQ+L SG +
Sbjct: 232 QK-----QAIGVEY--IIGADQNNLQRALVKREVLLCAGAIASPQILQRSGVGQSTFLKS 284
Query: 294 HNITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGEN--FA 351
+I VV D P VG+ + D+ +++ VSL + Y + A G F
Sbjct: 285 MDIDVVHDLPGVGENLQDHL--EMYLQYKCKQPVSLYPALKW-----YNQPAIGAEWLFN 337
Query: 352 G---GSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVM 408
G G+ + + G F + K P Q +A A+ + F+ M
Sbjct: 338 GTGIGASNQFEAGGFIRSSDEF-KWPNIQYHFLPVAINYNGSNAVKEHGFQAHV---GSM 393
Query: 409 GPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMS 468
S G ++L++++P +PS+ FNY +D + I +I+ + ++ + +S
Sbjct: 394 RSPSRGRIKLKSKDPFAHPSILFNYMSTEQDWREFRDAIRITREIMHQPALDPYRGDEIS 453
Query: 469 VPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK----VVDHDYKV 524
+H L+ F R+ T +H C++G+ VVD +V
Sbjct: 454 P---------------GKHLQTDAELDDFVRNHAETAYHPSCSCKMGEDEMAVVDGQGRV 498
Query: 525 LGVDALRVIDGSTFYYSPGTNPQATVMMLGRYV 557
G++ LRV+D S N AT +M+ +
Sbjct: 499 HGMNGLRVVDASIMPLIITGNLNATTIMIAEKI 531
>sp|B7GYG5|BETA_ACIB3 Choline dehydrogenase OS=Acinetobacter baumannii (strain
AB307-0294) GN=betA PE=3 SV=1
Length = 552
Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 140/573 (24%), Positives = 232/573 (40%), Gaps = 104/573 (18%)
Query: 45 VSYYDYIIIGGGTAGCPLAATLSQN--ASVLLLERGGSPYGNPNITNLGSFGAALS---- 98
+ YDYIIIG G+AG LAA L+++ +VLLLE GG Y + AAL+
Sbjct: 3 IKEYDYIIIGAGSAGNVLAARLTEDKDTTVLLLEAGGPDY---RLDFRTQMPAALAYPLQ 59
Query: 99 ----DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAA---------------- 138
+ + + + ++ + R + LGG S +N Y R
Sbjct: 60 GRRYNWAYLTDPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLEQWATHKGLENW 119
Query: 139 ------PYY----VREVGWDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPY 188
PYY R++G ++ Y V+ P + + + +VE GV
Sbjct: 120 TYADCLPYYKKAETRDIGGND------YHGDSGPVSVATP-KNGNNVLFHAMVEAGVQAG 172
Query: 189 NGFTYDHMYGTKIGG------TIFDQNGQRHTAADLLEYANPS-GLTLLLHASVHKVLFR 241
T D + G + G T+ + + TA L+ A LT+L HA+ +K+LF
Sbjct: 173 YPRT-DDLNGYQQEGFGPMDRTVTPKGRRSSTARGYLDMAKGRPNLTILTHATTNKILFN 231
Query: 242 IKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------A 293
K A GV + GA + K E+++ AGA+ SPQ+L SG +
Sbjct: 232 QK-----QAIGVEY--IIGADQNNLQRALVKREVLLCAGAIASPQILQRSGVGQSTFLKS 284
Query: 294 HNITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGEN--FA 351
+I VV D P VG+ + D+ +++ VSL + Y + A G F
Sbjct: 285 MDIDVVHDLPGVGENLQDHL--EMYLQYKCKQPVSLYPALKW-----YNQPAIGAEWLFN 337
Query: 352 G---GSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVM 408
G G+ + + G F + K P Q +A A+ + F+ M
Sbjct: 338 GTGIGASNQFEAGGFIRSSDEF-KWPNIQYHFLPVAINYNGSNAVKEHGFQAHV---GSM 393
Query: 409 GPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMS 468
S G ++L++++P +PS+ FNY +D + I +I+ + ++ + +S
Sbjct: 394 RSPSRGRIKLKSKDPFAHPSILFNYMSTEQDWREFRDAIRITREIMHQPALDPYRGDEIS 453
Query: 469 VPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK----VVDHDYKV 524
+H L+ F R+ T +H C++G+ VVD +V
Sbjct: 454 P---------------GKHLQTDAELDDFVRNHAETAYHPSCSCKMGEDEMAVVDGQGRV 498
Query: 525 LGVDALRVIDGSTFYYSPGTNPQATVMMLGRYV 557
G++ LRV+D S N AT +M+ +
Sbjct: 499 HGMNGLRVVDASIMPLIITGNLNATTIMIAEKI 531
>sp|Q8PPG8|BETA_XANAC Choline dehydrogenase OS=Xanthomonas axonopodis pv. citri (strain
306) GN=betA PE=3 SV=1
Length = 556
Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 138/563 (24%), Positives = 222/563 (39%), Gaps = 91/563 (16%)
Query: 48 YDYIIIGGGTAGCPLAATLSQN--ASVLLLERGGSPYGNPNITNLGSFGAALS------- 98
YDYIIIG G+AG LAA L+++ +VLLLE GG Y + AAL+
Sbjct: 5 YDYIIIGAGSAGNVLAARLTEDPGVTVLLLEAGGPDY---RVDFRTQMPAALAFPLQGRR 61
Query: 99 -DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAP----YYVREVG---WDER 150
+ + + + ++ + R + LGG S +N Y R ++ + G W R
Sbjct: 62 YNWAYETEPEPYMDNRRMECGRGKGLGGSSLINGMCYIRGNALDFDHWAKRPGLEDWSYR 121
Query: 151 LV-------------NESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLP-------YNG 190
V Y + V+ P + + +VE GV NG
Sbjct: 122 DVLPYFRKAETRDIGANDYHGGDGPVSVATPKND-NNVLFHAMVEAGVQAGYPRTGDLNG 180
Query: 191 FTYDHMYGTKIGGTIFDQNGQRHTAADLLEYANP-SGLTLLLHASVHKVLFRIKGKARPV 249
+ + + T+ + + TA L+ A P GL ++ HA+ ++LF GK
Sbjct: 181 YQQEGF--GPMDRTVTPRGRRASTARGYLDMAKPRDGLHIVTHATTDRILF--AGKRAIG 236
Query: 250 AHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLD 301
H +V + G A + E++V AGA+ SPQLL SG A ++ +V D
Sbjct: 237 VHYLVGNSSEGIDAHA------RREVLVCAGAIASPQLLQRSGVGAPDLLRALDVQLVHD 290
Query: 302 QPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAG---GSPSPR 358
P VGQ + D+ +++ VSL + Q+ + + FAG G+ +
Sbjct: 291 LPGVGQNLQDHL--EVYIQYACTKPVSLYPAL---QWWNQPAIGAQWLFAGTGTGASNQF 345
Query: 359 DYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLEL 418
+ G F + + P Q +A A+ + F+ M S G +
Sbjct: 346 EAGGFI-RTREEFDWPNIQYHFLPVAINYNGSNAVKEHGFQAHV---GSMRTPSRGRVHA 401
Query: 419 RTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTAS 478
++R+P +PS+ FNY +D Q I +II + ++ +S A
Sbjct: 402 KSRDPRQHPSILFNYQSTDQDWQEFRDAIRITREIIAQPALDAYRGREISPSADCKTDA- 460
Query: 479 APVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK----VVDHDYKVLGVDALRVID 534
L+ F R T +H C +G VVD +V G++ LRVID
Sbjct: 461 --------------ELDAFVRSRAETAYHPSCSCAMGTDAMAVVDGQGRVHGMEGLRVID 506
Query: 535 GSTFYYSPGTNPQATVMMLGRYV 557
S N AT +M+ +
Sbjct: 507 ASIMPRIITGNLNATTIMIAEKI 529
>sp|A6X2G7|BETA_OCHA4 Choline dehydrogenase OS=Ochrobactrum anthropi (strain ATCC 49188 /
DSM 6882 / NCTC 12168) GN=betA PE=3 SV=1
Length = 549
Score = 92.8 bits (229), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 137/562 (24%), Positives = 225/562 (40%), Gaps = 103/562 (18%)
Query: 49 DYIIIGGGTAGCPLAATLSQNA--SVLLLERGGSPYGNPNITNLGSFGAALS-------- 98
D++IIG G+AG +A LS++ SV+++E YG P++ L AALS
Sbjct: 4 DFVIIGSGSAGSAMAYRLSEDGRYSVIVIE-----YGVPDVGPLIQMPAALSFPMNMETY 58
Query: 99 DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREV---------GWDE 149
D ++ + I ++ R +VLGG S +N Y R + R+ GW
Sbjct: 59 DWGFSTEPEPHIGGRSLVTPRGKVLGGSSSINGMVYVRG---HARDYDHWSESGARGWAY 115
Query: 150 RLVNESYQWVEKVVAFEPPMR------QWQSAVRD-----GLVEVGVLPYNGFTYDHMYG 198
V ++ +E + R Q RD VE G T D+
Sbjct: 116 ADVLPYFKRMENSSGGQEGWRGTNGPLYIQRGKRDNPLFHAFVEAGHEAGFEVTEDYNGE 175
Query: 199 TKIGGTIFDQ---NGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVF 255
+ G +Q NG+R +AA+ Y P+ L +V V KG AR + +
Sbjct: 176 KQEGFGPMEQTIHNGRRWSAANA--YLKPA----LKRPNVKLV----KGLARKIV--LEG 223
Query: 256 RDATGAK---HRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPL 304
+ A G + R++ + E+I++A ++ SP+LLMLSG H I VV D+P
Sbjct: 224 KRAVGVEIEAGRSFSTIRARREVIIAASSINSPKLLMLSGIGPAAQLKEHGIEVVADRPG 283
Query: 305 VGQGMSDNPMNAIFVPSPVPVEV-SLIQVVGITQFGS---YIEAASG--ENFAGGSPSPR 358
VGQ + D+ I P+ + S + + + G+ + + G +F +
Sbjct: 284 VGQNLQDHLEVYIQQECTQPITLYSKLNLFSKAKIGAEWLFFKTGDGATNHFESAAFLRS 343
Query: 359 DYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLEL 418
G+ P I Q +P R A +A P M S G + L
Sbjct: 344 KAGVEYPDI-QYHFLPVAIRYDGKAAAQSHGFQAHVGP-----------MRSKSRGSVTL 391
Query: 419 RTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTAS 478
R+ NP + P + FNY +D + +I +F+ ++ +
Sbjct: 392 RSANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFNPYRGAEIQPGA------- 444
Query: 479 APVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG------KVVDHDYKVLGVDALRV 532
H + ++ F ++ V + +H G C++G VVD + +V+GV+ LRV
Sbjct: 445 --------HVQSDDEIDNFIKEHVESAFHPCGTCKMGAVDDPMAVVDAECRVIGVEGLRV 496
Query: 533 IDGSTFYYSPGTNPQATVMMLG 554
D S F N +M+G
Sbjct: 497 ADSSIFPRITNGNLNGPSIMVG 518
>sp|Q3BXK8|BETA_XANC5 Choline dehydrogenase OS=Xanthomonas campestris pv. vesicatoria
(strain 85-10) GN=betA PE=3 SV=1
Length = 556
Score = 92.8 bits (229), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 140/562 (24%), Positives = 223/562 (39%), Gaps = 89/562 (15%)
Query: 48 YDYIIIGGGTAGCPLAATLSQN--ASVLLLERGGSPYGNPNITNLGSFGAALS------- 98
YDYIIIG G+AG LAA L+++ +VLLLE GG Y + AAL+
Sbjct: 5 YDYIIIGAGSAGNVLAARLTEDPGVTVLLLEAGGPDY---RLDFRTQMPAALAFPLQGRR 61
Query: 99 -DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAP----YYVREVG---WDER 150
+ + + + ++ + R + LGG S +N Y R ++ + G W R
Sbjct: 62 YNWAYETEPEPYMDNRRMECGRGKGLGGSSLINGMCYIRGNALDFDHWAKRPGLEDWSYR 121
Query: 151 LV-------------NESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFTYDHMY 197
V Y + V+ P + + +VE GV T D +
Sbjct: 122 DVLPYFRKAETRDIGANDYHGGDGPVSVATPKND-NNVLFHAMVEAGVQAGYPRT-DDLN 179
Query: 198 GTKIGG------TIFDQNGQRHTAADLLEYANP-SGLTLLLHASVHKVLFRIKGKARPVA 250
G + G T+ + + TA L+ A P GL ++ HA+ ++LF GK
Sbjct: 180 GYQQEGFGPMDRTVTPRGRRASTARGYLDMAKPRDGLHIVTHATTDRILF--AGKRAIGV 237
Query: 251 HGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQ 302
H +V + G A + E++V AGA+ SPQLL SG A ++ +V D
Sbjct: 238 HYLVGNSSEGIDAHA------RREVLVCAGAIASPQLLQRSGVGAPDLLRALDVQLVHDL 291
Query: 303 PLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAG---GSPSPRD 359
P VGQ + D+ +++ VSL + Q+ + + FAG G+ + +
Sbjct: 292 PGVGQNLQDHL--EVYIQYACTKPVSLYPAL---QWWNQPAIGAEWLFAGTGTGASNQFE 346
Query: 360 YGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELR 419
G F + + P Q +A A+ + F+ M S G + +
Sbjct: 347 AGGFI-RTREEFDWPNIQYHFLPVAINYNGSNAVKEHGFQAHV---GSMRTPSRGRVHAK 402
Query: 420 TRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASA 479
+R+P +PS+ FNY +D Q I +II + ++ +S A
Sbjct: 403 SRDPRQHPSILFNYQSTDQDWQEFRDAIRITREIIAQPALDPYRGREISPSADCKTDA-- 460
Query: 480 PVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK----VVDHDYKVLGVDALRVIDG 535
L+ F R T +H C +G VVD +V G++ LRVID
Sbjct: 461 -------------ELDAFVRSRAETAYHPSCSCAMGTDDMAVVDGQGRVHGMEGLRVIDA 507
Query: 536 STFYYSPGTNPQATVMMLGRYV 557
S N AT +M+ +
Sbjct: 508 SIMPRIITGNLNATTIMIAEKI 529
>sp|A7MFA8|BETA_CROS8 Choline dehydrogenase OS=Cronobacter sakazakii (strain ATCC
BAA-894) GN=betA PE=3 SV=1
Length = 559
Score = 92.8 bits (229), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 135/571 (23%), Positives = 226/571 (39%), Gaps = 107/571 (18%)
Query: 48 YDYIIIGGGTAGCPLAATLSQNA--SVLLLERGGSPYGNPNITNLGSF------GAALSD 99
+DYIIIG G+AG LA L++++ +VLLLE GG Y T + + G +
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDSDVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGKRYNW 62
Query: 100 LSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREVGWDERLVNESYQWV 159
T P + +++ + R + LGG S +N Y R + W ++ E + ++
Sbjct: 63 AYETEP-EPYMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLDN--WAQQPGLERWTYL 119
Query: 160 EKVVAFEPPMRQWQSAVRD---------------------------GLVEVGVLPYNGFT 192
+ + + +S RD ++E GV T
Sbjct: 120 DCLPYYR------KSETRDIGANDYHGGDGPVSITTCKPGNNPLFAAMIEAGVQAGYPRT 173
Query: 193 YDHMYGTKIGGTIFDQ----NGQRH-TAADLLEYANPS-GLTLLLHASVHKVLFRIKGKA 246
D + G D+ G+R TA L+ A L ++ HA+ ++LF K +A
Sbjct: 174 DDLNGYQQEGFGPMDRFVTPKGRRSSTARGYLDTAKQRPNLKIITHATTDRILFENK-RA 232
Query: 247 RPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGAHN--------ITV 298
VA+ A+ + + E+++ AGA+ SPQ+L SG N I V
Sbjct: 233 VGVAY---LHGASNTPQEVHARR----EVLLCAGAIASPQILQRSGVGNAELLKQFDIPV 285
Query: 299 VLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQV--------VGITQFGSYIEAASGENF 350
V D P VG+ + D+ +++ VSL +G + + +F
Sbjct: 286 VHDLPGVGENLQDHL--EMYLQYECKEPVSLYPALKWWNQPKIGAEWLFNGTGIGASNHF 343
Query: 351 AGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGP 410
GG P I Q +P +A A++ F+ M
Sbjct: 344 EGGGFIRSREEFAWPNI-QYHFLP--------VAINYNGSNAVEAHGFQCHV---GSMRS 391
Query: 411 VSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVP 470
S GH+ +++R+P+ +P++ FNY +D Q I +II + KF+ +S
Sbjct: 392 PSRGHVRIKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITRQIINQPALDKFRGREISPG 451
Query: 471 ILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK----VVDHDYKVLG 526
I L++F R+ T +H G C++G VVD + +V G
Sbjct: 452 I---------------DCQTDEQLDEFVRNHAETAYHPCGTCKMGSDEMAVVDDEGRVHG 496
Query: 527 VDALRVIDGSTFYYSPGTNPQATVMMLGRYV 557
++ LRV+D S N AT +M+G +
Sbjct: 497 LEGLRVVDASIMPLIITGNLNATTIMIGEKI 527
>sp|Q8G1Z8|BETA_BRUSU Choline dehydrogenase OS=Brucella suis biovar 1 (strain 1330)
GN=betA PE=3 SV=1
Length = 549
Score = 92.4 bits (228), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 138/559 (24%), Positives = 220/559 (39%), Gaps = 97/559 (17%)
Query: 49 DYIIIGGGTAGCPLAATLSQNA--SVLLLERGGSPYGNPNITNLGSFGAALS-------- 98
D++IIG G+AG +A LS+N SV+++E YG P++ L AALS
Sbjct: 4 DFVIIGSGSAGSAMAYRLSENGRYSVIVIE-----YGVPDVGPLIQMPAALSFPMNMETY 58
Query: 99 DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAP----YYVRE--VGWDERLV 152
D +S + I ++ R +VLGG S +N Y R ++ + GW V
Sbjct: 59 DWGFSSEPEPHIGGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAYADV 118
Query: 153 NESYQWVEKVVAFEPPMRQW------QSAVRD-----GLVEVGVLPYNGFTYDHMYGTKI 201
++ +E + R Q RD VE G T D+ +
Sbjct: 119 LPYFKRMENSQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVTDDYNGEKQE 178
Query: 202 GGTIFDQ---NGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA 258
G +Q NG+R +AA+ Y P+ L +V V KG AR + + + A
Sbjct: 179 GFGPMEQTIHNGRRWSAANA--YLKPA----LKRPNVKLV----KGFARKIV--LEGKRA 226
Query: 259 TGAK---HRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQ 307
G + R + + E+I++A ++ SP+LLMLSG H I +V D+P VGQ
Sbjct: 227 VGVEIEAGRTFSTIRARREVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGVGQ 286
Query: 308 GMSDNPMNAIFVPSPVPV----EVSLIQV--VGITQFGSYIEAASGENFAGGSPSPRDYG 361
+ D+ I P+ E++L +G+ + +F + G
Sbjct: 287 NLQDHLEVYIQQECTQPITLYSELNLFSKARIGVEWLLFKTGDGATNHFESAAFVRSKAG 346
Query: 362 MFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELRTR 421
+ P I Q +P R A +A P M S G + LR+
Sbjct: 347 VEYPDI-QYHFLPVAIRYDGKAAAQSHGFQAHVGP-----------MRSKSRGSVTLRSA 394
Query: 422 NPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPV 481
NP + P + FNY +D + +I +F ++ +
Sbjct: 395 NPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFDPYRGAEIQPGA---------- 444
Query: 482 NLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG------KVVDHDYKVLGVDALRVIDG 535
H ++ F R+ V + +H G C++G VVD + +V+GV+ LRV D
Sbjct: 445 -----HVQTDDEIDNFIREHVESAFHPCGTCKMGAVDDPMAVVDPECRVIGVEGLRVADS 499
Query: 536 STFYYSPGTNPQATVMMLG 554
S F N +M+G
Sbjct: 500 SIFPRITNGNLNGPSIMVG 518
>sp|Q8P5D7|BETA_XANCP Choline dehydrogenase OS=Xanthomonas campestris pv. campestris
(strain ATCC 33913 / NCPPB 528 / LMG 568) GN=betA PE=3
SV=1
Length = 556
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 142/562 (25%), Positives = 221/562 (39%), Gaps = 89/562 (15%)
Query: 48 YDYIIIGGGTAGCPLAATLSQN--ASVLLLERGGSPYGNPNITNLGSFGAALS------- 98
YDYIIIG G+AG LAA L+++ SVLLLE GG Y + AAL+
Sbjct: 5 YDYIIIGAGSAGNVLAARLTEDPGVSVLLLEAGGPDY---RLDFRTQMPAALAFPLQGRR 61
Query: 99 -DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAP----YYVREVG---WDER 150
+ + + + + + R + LGG S +N Y R ++ + G W R
Sbjct: 62 YNWAYETEPEPHMDNRRMECGRGKGLGGSSLINGMCYIRGNALDFDHWAKRPGLEDWGYR 121
Query: 151 LV-------------NESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFTYDHMY 197
V Y E V+ P + + +V+ GV T D +
Sbjct: 122 DVLPYFRKAETRDIGANDYHGGEGPVSVATPKND-NNVLFQAMVDAGVQAGYPRT-DDLN 179
Query: 198 GTKIGG------TIFDQNGQRHTAADLLEYANP-SGLTLLLHASVHKVLFRIKGKARPVA 250
G + G T+ Q + TA L+ A P L ++ HA+ ++LF GK
Sbjct: 180 GYQQEGFGPMDRTVTPQGRRASTARGYLDMAKPRDSLHIVTHATTDRILF--AGKRAVGV 237
Query: 251 HGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQ 302
H +V + G A + E++V AGA+ SPQLL SG A ++ +V D
Sbjct: 238 HYLVGNSSEGIDAHA------RREVLVCAGAIASPQLLQRSGVGAPDLLRALDVQLVHDL 291
Query: 303 PLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAG---GSPSPRD 359
P VGQ + D+ +++ VSL + Q+ + + FAG G+ + +
Sbjct: 292 PGVGQNLQDHL--EVYMQYACTKPVSLYPAL---QWWNQPAIGAEWLFAGTGTGASNQFE 346
Query: 360 YGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELR 419
G F + + P Q +A A+ + F+ M S G + R
Sbjct: 347 AGGFI-RTREEFDWPNIQYHFLPVAINYNGSNAVKEHGFQAHV---GSMRTPSRGRVHAR 402
Query: 420 TRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASA 479
+R+P +PS+ FNY +D Q I +II + ++ +S A
Sbjct: 403 SRDPRQHPSILFNYQSTDQDWQEFRDAIRITREIIAQPALDPYRGREISPSADCKTDA-- 460
Query: 480 PVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK----VVDHDYKVLGVDALRVIDG 535
L+ F R T +H C +G VVD +V G++ LRVID
Sbjct: 461 -------------ELDAFVRARAETAYHPSCSCAMGTDDMAVVDGQGRVHGMEGLRVIDA 507
Query: 536 STFYYSPGTNPQATVMMLGRYV 557
S N AT +M+ +
Sbjct: 508 SIMPRIITGNLNATTIMIAEKI 529
>sp|B0RNU9|BETA_XANCB Choline dehydrogenase OS=Xanthomonas campestris pv. campestris
(strain B100) GN=betA PE=3 SV=1
Length = 556
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 142/562 (25%), Positives = 221/562 (39%), Gaps = 89/562 (15%)
Query: 48 YDYIIIGGGTAGCPLAATLSQN--ASVLLLERGGSPYGNPNITNLGSFGAALS------- 98
YDYIIIG G+AG LAA L+++ SVLLLE GG Y + AAL+
Sbjct: 5 YDYIIIGAGSAGNVLAARLTEDPGVSVLLLEAGGPDY---RLDFRTQMPAALAFPLQGRR 61
Query: 99 -DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAP----YYVREVG---WDER 150
+ + + + + + R + LGG S +N Y R ++ + G W R
Sbjct: 62 YNWAYETEPEPHMDNRRMECGRGKGLGGSSLINGMCYIRGNALDFDHWAKRPGLEDWGYR 121
Query: 151 LV-------------NESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFTYDHMY 197
V Y E V+ P + + +V+ GV T D +
Sbjct: 122 DVLPYFRKAETRDIGANDYHGGEGPVSVATPKND-NNVLFQAMVDAGVQAGYPRT-DDLN 179
Query: 198 GTKIGG------TIFDQNGQRHTAADLLEYANP-SGLTLLLHASVHKVLFRIKGKARPVA 250
G + G T+ Q + TA L+ A P L ++ HA+ ++LF GK
Sbjct: 180 GYQQEGFGPMDRTVTPQGRRASTARGYLDMAKPRDSLHIVTHATTDRILF--AGKRAVGV 237
Query: 251 HGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQ 302
H +V + G A + E++V AGA+ SPQLL SG A ++ +V D
Sbjct: 238 HYLVGNSSEGIDAHA------RREVLVCAGAIASPQLLQRSGVGAPDLLRALDVQLVHDL 291
Query: 303 PLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAG---GSPSPRD 359
P VGQ + D+ +++ VSL + Q+ + + FAG G+ + +
Sbjct: 292 PGVGQNLQDHL--EVYMQYACTKPVSLYPAL---QWWNQPAIGAEWLFAGTGTGASNQFE 346
Query: 360 YGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELR 419
G F + + P Q +A A+ + F+ M S G + R
Sbjct: 347 AGGFI-RTREEFDWPNIQYHFLPVAINYNGSNAVKEHGFQAHV---GSMRTPSRGRVHAR 402
Query: 420 TRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASA 479
+R+P +PS+ FNY +D Q I +II + ++ +S A
Sbjct: 403 SRDPRQHPSILFNYQSTDQDWQEFRDAIRITREIIAQPALDPYRGREISPSADCKTDA-- 460
Query: 480 PVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK----VVDHDYKVLGVDALRVIDG 535
L+ F R T +H C +G VVD +V G++ LRVID
Sbjct: 461 -------------ELDAFVRARAETAYHPSCSCAMGTDDMAVVDGQGRVHGMEGLRVIDA 507
Query: 536 STFYYSPGTNPQATVMMLGRYV 557
S N AT +M+ +
Sbjct: 508 SIMPRIITGNLNATTIMIAEKI 529
>sp|Q4UYN5|BETA_XANC8 Choline dehydrogenase OS=Xanthomonas campestris pv. campestris
(strain 8004) GN=betA PE=3 SV=1
Length = 556
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 142/562 (25%), Positives = 221/562 (39%), Gaps = 89/562 (15%)
Query: 48 YDYIIIGGGTAGCPLAATLSQN--ASVLLLERGGSPYGNPNITNLGSFGAALS------- 98
YDYIIIG G+AG LAA L+++ SVLLLE GG Y + AAL+
Sbjct: 5 YDYIIIGAGSAGNVLAARLTEDPGVSVLLLEAGGPDY---RLDFRTQMPAALAFPLQGRR 61
Query: 99 -DLSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAP----YYVREVG---WDER 150
+ + + + + + R + LGG S +N Y R ++ + G W R
Sbjct: 62 YNWAYETEPEPHMDNRRMECGRGKGLGGSSLINGMCYIRGNALDFDHWAKRPGLEDWGYR 121
Query: 151 LV-------------NESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFTYDHMY 197
V Y E V+ P + + +V+ GV T D +
Sbjct: 122 DVLPYFRKAETRDIGANDYHGGEGPVSVATPKND-NNVLFQAMVDAGVQAGYPRT-DDLN 179
Query: 198 GTKIGG------TIFDQNGQRHTAADLLEYANP-SGLTLLLHASVHKVLFRIKGKARPVA 250
G + G T+ Q + TA L+ A P L ++ HA+ ++LF GK
Sbjct: 180 GYQQEGFGPMDRTVTPQGRRASTARGYLDMAKPRDSLHIVTHATTDRILF--AGKRAVGV 237
Query: 251 HGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQ 302
H +V + G A + E++V AGA+ SPQLL SG A ++ +V D
Sbjct: 238 HYLVGNSSEGIDAHA------RREVLVCAGAIASPQLLQRSGVGAPDLLRALDVQLVHDL 291
Query: 303 PLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAG---GSPSPRD 359
P VGQ + D+ +++ VSL + Q+ + + FAG G+ + +
Sbjct: 292 PGVGQNLQDHL--EVYMQYACTKPVSLYPAL---QWWNQPAIGAEWLFAGTGTGASNQFE 346
Query: 360 YGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELR 419
G F + + P Q +A A+ + F+ M S G + R
Sbjct: 347 AGGFI-RTREEFDWPNIQYHFLPVAINYNGSNAVKEHGFQAHV---GSMRTPSRGRVHAR 402
Query: 420 TRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASA 479
+R+P +PS+ FNY +D Q I +II + ++ +S A
Sbjct: 403 SRDPRQHPSILFNYQSTDQDWQEFRDAIRITREIIAQPALDPYRGREISPSADCKTDA-- 460
Query: 480 PVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK----VVDHDYKVLGVDALRVIDG 535
L+ F R T +H C +G VVD +V G++ LRVID
Sbjct: 461 -------------ELDAFVRARAETAYHPSCSCAMGTDDMAVVDGQGRVHGMEGLRVIDA 507
Query: 536 STFYYSPGTNPQATVMMLGRYV 557
S N AT +M+ +
Sbjct: 508 SIMPRIITGNLNATTIMIAEKI 529
>sp|Q6D6D9|BETA_ERWCT Choline dehydrogenase OS=Erwinia carotovora subsp. atroseptica
(strain SCRI 1043 / ATCC BAA-672) GN=betA PE=3 SV=1
Length = 559
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 141/570 (24%), Positives = 232/570 (40%), Gaps = 107/570 (18%)
Query: 48 YDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSPYGNPNITNLGSF------GAALSD 99
YDYIIIG G+AG LAA L++ + SVLLLE GG Y T + + G +
Sbjct: 3 YDYIIIGAGSAGNVLAARLTEESDVSVLLLEAGGPDYRLDFRTQMPAALAFPLQGKRYNW 62
Query: 100 LSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRA---------------------- 137
T P + +++ + R + LGG S +N Y R
Sbjct: 63 AYETDP-EPHMNDRRMECGRGKGLGGSSLINGMCYIRGNAMDFDHWATMSGLEDWSYLDC 121
Query: 138 APYY----VREVGWDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFTY 193
PY+ R+VG ++ Y V+ P + + + +VE GV T
Sbjct: 122 LPYFRKAETRDVGAND------YHGASGPVSVTTP-KMGNNELFHAMVEAGVQAGYPRT- 173
Query: 194 DHMYGTKIGG------TIFDQNGQRHTAADLLEYANP-SGLTLLLHASVHKVLFRIKGKA 246
D + G + G T+ + + TA L+ A LT++ HA ++LF K +A
Sbjct: 174 DDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKSRKNLTIVTHALTDRILFDGK-RA 232
Query: 247 RPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGAH--------NITV 298
VA+ F+ + +A + E+++ AGA+ SPQ+L SG +I+V
Sbjct: 233 VGVAY---FKGESAQTAKA------RREVLLCAGAIASPQILQRSGVGPKDLLQRLDISV 283
Query: 299 VLDQPLVGQGMSDNPMNAIFVPSPVPVEV-SLIQVVGITQFGSYIE------AASGENFA 351
V D P VG+ + D+ + PV + +Q + G+ AS + A
Sbjct: 284 VHDLPGVGENLQDHLEMYLQYACKEPVSLYPALQWFNQPKIGAEWLFNGTGIGASNQFEA 343
Query: 352 GGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPV 411
GG RD + P I Q +P +A A+ + F+ M +
Sbjct: 344 GGFIRSRDEFTW-PNI-QYHFLP--------VAINYNGSNAVKEHGFQAHV---GSMRSL 390
Query: 412 STGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPI 471
S G +++R+++ ++PS+ FNY +D Q I +I+ + K++ +S +
Sbjct: 391 SRGRVQVRSKDAREHPSILFNYMSTEQDWQEFRDAIRITREIMAQPALDKYRGREISPGL 450
Query: 472 LVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGK----VVDHDYKVLGV 527
V L++F R T +H C++G+ VVD V G+
Sbjct: 451 AV---------------QTDEELDEFIRTHAETAFHPSCSCKMGEDDMSVVDGQGCVHGM 495
Query: 528 DALRVIDGSTFYYSPGTNPQATVMMLGRYV 557
+ LRV+D S N AT +M+ +
Sbjct: 496 EGLRVVDASIMPQIITGNLNATTIMIAEKI 525
>sp|B5Z1R0|BETA_ECO5E Choline dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 /
EHEC) GN=betA PE=3 SV=1
Length = 562
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 137/560 (24%), Positives = 220/560 (39%), Gaps = 91/560 (16%)
Query: 48 YDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSPYGNPNITNLGSF------GAALSD 99
+DYIIIG G+AG LA L++ N SVLLLE GG Y T + + G +
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNW 62
Query: 100 LSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREVGWDERLVNESY--- 156
T P + F++ + R + LGG S +N Y R + + L N SY
Sbjct: 63 AYETEP-EPFMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLDNWAKEPGLENWSYLDC 121
Query: 157 -QWVEKVVAFEPPMRQWQSA---------------VRDGLVEVGVLPYNGFTYDHMYGTK 200
+ K + + + + ++E GV T D + G +
Sbjct: 122 LPYYRKAETRDVGENDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPRT-DDLNGYQ 180
Query: 201 IGG------TIFDQNGQRHTAADLLEYANPS-GLTLLLHASVHKVLFRIKGKARPVAHGV 253
G T+ Q + TA L+ A LT+ HA ++F K R V
Sbjct: 181 QEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFDCK---RAVGVEW 237
Query: 254 VFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGAHN--------ITVVLDQPLV 305
+ D+T K E+++ AGA+ SPQ+L SG N I +V D P V
Sbjct: 238 LEGDSTIPTRATANK-----EVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHDLPGV 292
Query: 306 GQGMSDNPMNAIFVPSPVPVEV-------SLIQVVGITQFGSYIEAASGENFAGGSPSPR 358
G+ + D+ + PV + + ++ FG AS AGG R
Sbjct: 293 GENLQDHLEMYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFIRSR 352
Query: 359 DYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLEL 418
+ + P I Q +P +A A+ + F+ M S GH+ +
Sbjct: 353 EEFAW-PNI-QYHFLP--------VAINYNGSNAVKEHGFQCHV---GSMRSPSRGHVRI 399
Query: 419 RTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTAS 478
++R+P+ +P++ FNY +D Q I +I+ + +++ +S
Sbjct: 400 KSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGREISPGT------- 452
Query: 479 APVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG----KVVDHDYKVLGVDALRVID 534
L++F R+ T +H G C++G VVD + +V G++ LRV+D
Sbjct: 453 --------ECQTDEQLDEFVRNHAETAFHPCGTCKMGYDEMSVVDGEGRVHGLEGLRVVD 504
Query: 535 GSTFYYSPGTNPQATVMMLG 554
S N AT +M+G
Sbjct: 505 ASIMPQIITGNLNATTIMIG 524
>sp|Q8X6C6|BETA_ECO57 Choline dehydrogenase OS=Escherichia coli O157:H7 GN=betA PE=3 SV=1
Length = 562
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 137/560 (24%), Positives = 220/560 (39%), Gaps = 91/560 (16%)
Query: 48 YDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSPYGNPNITNLGSF------GAALSD 99
+DYIIIG G+AG LA L++ N SVLLLE GG Y T + + G +
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNW 62
Query: 100 LSSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREVGWDERLVNESY--- 156
T P + F++ + R + LGG S +N Y R + + L N SY
Sbjct: 63 AYETEP-EPFMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLDNWAKEPGLENWSYLDC 121
Query: 157 -QWVEKVVAFEPPMRQWQSA---------------VRDGLVEVGVLPYNGFTYDHMYGTK 200
+ K + + + + ++E GV T D + G +
Sbjct: 122 LPYYRKAETRDVGENDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPRT-DDLNGYQ 180
Query: 201 IGG------TIFDQNGQRHTAADLLEYANPS-GLTLLLHASVHKVLFRIKGKARPVAHGV 253
G T+ Q + TA L+ A LT+ HA ++F K R V
Sbjct: 181 QEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFDCK---RAVGVEW 237
Query: 254 VFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSGAHN--------ITVVLDQPLV 305
+ D+T K E+++ AGA+ SPQ+L SG N I +V D P V
Sbjct: 238 LEGDSTIPTRATANK-----EVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHDLPGV 292
Query: 306 GQGMSDNPMNAIFVPSPVPVEV-------SLIQVVGITQFGSYIEAASGENFAGGSPSPR 358
G+ + D+ + PV + + ++ FG AS AGG R
Sbjct: 293 GENLQDHLEMYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFIRSR 352
Query: 359 DYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLEL 418
+ + P I Q +P +A A+ + F+ M S GH+ +
Sbjct: 353 EEFAW-PNI-QYHFLP--------VAINYNGSNAVKEHGFQCHV---GSMRSPSRGHVRI 399
Query: 419 RTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTAS 478
++R+P+ +P++ FNY +D Q I +I+ + +++ +S
Sbjct: 400 KSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGREISPGT------- 452
Query: 479 APVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG----KVVDHDYKVLGVDALRVID 534
L++F R+ T +H G C++G VVD + +V G++ LRV+D
Sbjct: 453 --------ECQTDEQLDEFVRNHAETAFHPCGTCKMGYDEMSVVDGEGRVHGLEGLRVVD 504
Query: 535 GSTFYYSPGTNPQATVMMLG 554
S N AT +M+G
Sbjct: 505 ASIMPQIITGNLNATTIMIG 524
>sp|A8Z5A4|BETA_STAAT Choline dehydrogenase OS=Staphylococcus aureus (strain USA300 /
TCH1516) GN=betA PE=3 SV=1
Length = 569
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 134/550 (24%), Positives = 220/550 (40%), Gaps = 73/550 (13%)
Query: 48 YDYIIIGGGTAGCPLAATLSQNAS--VLLLERGGSPYGNPNITNLGSF-----GAALSDL 100
YDY+IIGGG+AG L LS++ VL+LE G S Y + + G D
Sbjct: 8 YDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPSGNKFYDW 67
Query: 101 SSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREVGWDERLVNESYQWVE 160
++ + + V ++R +VLGG S +N Y R P + GW E E++ +
Sbjct: 68 IYSTDEEPHMGGRKVAHARGKVLGGSSSINGMIYQRGNP--MDYEGWAEPEGMETWDFAH 125
Query: 161 KVVAFEPPMRQWQSAV------RDGLVEVGVLPYNGFTYDHMYGTKIGGTIF---DQNGQ 211
+ F+ + + +A DG +++ P + + + D NG
Sbjct: 126 CLPYFKKLEKTYGAAPYDKFRGHDGPIKLKRGPATNPLFQSFFDAGVEAGYHKTPDVNGF 185
Query: 212 RHTAADLLEYANPSGLTL-----LLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAY 266
R + G + LH ++ + ++ +A R ATG Y
Sbjct: 186 RQEGFGPFDSQVHRGRRMSASRAYLHPAMKRKNLTVETRAFVTEIHYEGRRATGV---TY 242
Query: 267 LKNGP-----KNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDNP 313
KNG NE+I+S GA +PQLL LSG + I + P VG+ D+
Sbjct: 243 KKNGKLHTIDANEVILSGGAFNTPQLLQLSGIGDSEFLKSKGIEPRVHLPGVGENFEDHL 302
Query: 314 MNAIFVPSPVPV------EVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKI 367
I PV ++ + +G+ + AA+ +F GG + + P +
Sbjct: 303 EVYIQHKCKEPVSLQPSLDIKRMPFIGLQWIFTRTGAAASNHFEGGGFVRSNNEVDYPNL 362
Query: 368 GQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPV---STGHLELRTRNPN 424
+P IA + KA A G+ + +GP+ S G L++++++P
Sbjct: 363 -MFHFLP--------IAVRYDGQKA----AVAHGYQVH--VGPMYSNSRGSLKIKSKDPF 407
Query: 425 DNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLL 484
+ PS+ FNY ED + V+ I I+ K+ F +S P T ++ +
Sbjct: 408 EKPSIRFNYLSTEEDKKEWVEAIRVARNILSQKAMDPFNGGEIS-PGPEVQTDEEILDWV 466
Query: 485 PRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDH-DYKVLGVDALRVIDGSTFYYSPG 543
R + T+L C + VVD KV G++ LRV+D S +
Sbjct: 467 RR--DGETALHPSCSAKMGP------ASDPMAVVDPLTMKVHGMENLRVVDASAMPRTTN 518
Query: 544 TNPQATVMML 553
N A V+ML
Sbjct: 519 GNIHAPVLML 528
>sp|Q6GDJ1|BETA_STAAR Choline dehydrogenase OS=Staphylococcus aureus (strain MRSA252)
GN=betA PE=3 SV=1
Length = 569
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 134/550 (24%), Positives = 220/550 (40%), Gaps = 73/550 (13%)
Query: 48 YDYIIIGGGTAGCPLAATLSQNAS--VLLLERGGSPYGNPNITNLGSF-----GAALSDL 100
YDY+IIGGG+AG L LS++ VL+LE G S Y + + G D
Sbjct: 8 YDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPSGNKFYDW 67
Query: 101 SSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREVGWDERLVNESYQWVE 160
++ + + V ++R +VLGG S +N Y R P + GW E E++ +
Sbjct: 68 IYSTDEEPHMGGRKVAHARGKVLGGSSSINGMIYQRGNP--MDYEGWAEPEGMETWDFAH 125
Query: 161 KVVAFEPPMRQWQSAV------RDGLVEVGVLPYNGFTYDHMYGTKIGGTIF---DQNGQ 211
+ F+ + + +A DG +++ P + + + D NG
Sbjct: 126 CLPYFKKLEKTYGAAPYDKFRGHDGPIKLKRGPATNPLFQSFFDAGVEAGYHKTPDVNGF 185
Query: 212 RHTAADLLEYANPSGLTL-----LLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAY 266
R + G + LH ++ + ++ +A R ATG Y
Sbjct: 186 RQEGFGPFDSQVHRGRRMSASRAYLHPAMKRKNLTVETRAFVTEIHYEGRRATGV---TY 242
Query: 267 LKNGP-----KNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDNP 313
KNG NE+I+S GA +PQLL LSG + I + P VG+ D+
Sbjct: 243 KKNGKLHTIDANEVILSGGAFNTPQLLQLSGIGDSEFLKSKGIEPRVHLPGVGENFEDHL 302
Query: 314 MNAIFVPSPVPV------EVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKI 367
I PV ++ + +G+ + AA+ +F GG + + P +
Sbjct: 303 EVYIQHKCKEPVSLQPSLDIKRMPFIGLQWIFTRTGAAASNHFEGGGFVRSNNEVDYPNL 362
Query: 368 GQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPV---STGHLELRTRNPN 424
+P IA + KA A G+ + +GP+ S G L++++++P
Sbjct: 363 -MFHFLP--------IAVRYDGQKA----AVAHGYQVH--VGPMYSNSRGSLKIKSKDPF 407
Query: 425 DNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLL 484
+ PS+ FNY ED + V+ I I+ K+ F +S P T ++ +
Sbjct: 408 EKPSIRFNYLSTEEDKKEWVEAIRVARNILSQKAMDPFNGGEIS-PGPEVQTDEEILDWV 466
Query: 485 PRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDH-DYKVLGVDALRVIDGSTFYYSPG 543
R + T+L C + VVD KV G++ LRV+D S +
Sbjct: 467 RR--DGETALHPSCSAKMGP------ASDPMAVVDPLTMKVHGMENLRVVDASAMPRTTN 518
Query: 544 TNPQATVMML 553
N A V+ML
Sbjct: 519 GNIHAPVLML 528
>sp|P60337|BETA_STAAN Choline dehydrogenase OS=Staphylococcus aureus (strain N315)
GN=betA PE=1 SV=1
Length = 569
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 134/550 (24%), Positives = 220/550 (40%), Gaps = 73/550 (13%)
Query: 48 YDYIIIGGGTAGCPLAATLSQNAS--VLLLERGGSPYGNPNITNLGSF-----GAALSDL 100
YDY+IIGGG+AG L LS++ VL+LE G S Y + + G D
Sbjct: 8 YDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPSGNKFYDW 67
Query: 101 SSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREVGWDERLVNESYQWVE 160
++ + + V ++R +VLGG S +N Y R P + GW E E++ +
Sbjct: 68 IYSTDEEPHMGGRKVAHARGKVLGGSSSINGMIYQRGNP--MDYEGWAEPEGMETWDFAH 125
Query: 161 KVVAFEPPMRQWQSAV------RDGLVEVGVLPYNGFTYDHMYGTKIGGTIF---DQNGQ 211
+ F+ + + +A DG +++ P + + + D NG
Sbjct: 126 CLPYFKKLEKTYGAAPYDKFRGHDGPIKLKRGPATNPLFQSFFDAGVEAGYHKTPDVNGF 185
Query: 212 RHTAADLLEYANPSGLTL-----LLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAY 266
R + G + LH ++ + ++ +A R ATG Y
Sbjct: 186 RQEGFGPFDSQVHRGRRMSASRAYLHPAMKRKNLTVETRAFVTEIHYEGRRATGV---TY 242
Query: 267 LKNGP-----KNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDNP 313
KNG NE+I+S GA +PQLL LSG + I + P VG+ D+
Sbjct: 243 KKNGKLHTIDANEVILSGGAFNTPQLLQLSGIGDSEFLKSKGIEPRVHLPGVGENFEDHL 302
Query: 314 MNAIFVPSPVPV------EVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKI 367
I PV ++ + +G+ + AA+ +F GG + + P +
Sbjct: 303 EVYIQHKCKEPVSLQPSLDIKRMPFIGLQWIFTRTGAAASNHFEGGGFVRSNNEVDYPNL 362
Query: 368 GQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPV---STGHLELRTRNPN 424
+P IA + KA A G+ + +GP+ S G L++++++P
Sbjct: 363 -MFHFLP--------IAVRYDGQKA----AVAHGYQVH--VGPMYSNSRGSLKIKSKDPF 407
Query: 425 DNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLL 484
+ PS+ FNY ED + V+ I I+ K+ F +S P T ++ +
Sbjct: 408 EKPSIRFNYLSTEEDKKEWVEAIRVARNILSQKAMDPFNGGEIS-PGPEVQTDEEILDWV 466
Query: 485 PRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDH-DYKVLGVDALRVIDGSTFYYSPG 543
R + T+L C + VVD KV G++ LRV+D S +
Sbjct: 467 RR--DGETALHPSCSAKMGP------ASDPMAVVDPLTMKVHGMENLRVVDASAMPRTTN 518
Query: 544 TNPQATVMML 553
N A V+ML
Sbjct: 519 GNIHAPVLML 528
>sp|P60336|BETA_STAAM Choline dehydrogenase OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=betA PE=1 SV=1
Length = 569
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 134/550 (24%), Positives = 220/550 (40%), Gaps = 73/550 (13%)
Query: 48 YDYIIIGGGTAGCPLAATLSQNAS--VLLLERGGSPYGNPNITNLGSF-----GAALSDL 100
YDY+IIGGG+AG L LS++ VL+LE G S Y + + G D
Sbjct: 8 YDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPSGNKFYDW 67
Query: 101 SSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREVGWDERLVNESYQWVE 160
++ + + V ++R +VLGG S +N Y R P + GW E E++ +
Sbjct: 68 IYSTDEEPHMGGRKVAHARGKVLGGSSSINGMIYQRGNP--MDYEGWAEPEGMETWDFAH 125
Query: 161 KVVAFEPPMRQWQSAV------RDGLVEVGVLPYNGFTYDHMYGTKIGGTIF---DQNGQ 211
+ F+ + + +A DG +++ P + + + D NG
Sbjct: 126 CLPYFKKLEKTYGAAPYDKFRGHDGPIKLKRGPATNPLFQSFFDAGVEAGYHKTPDVNGF 185
Query: 212 RHTAADLLEYANPSGLTL-----LLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAY 266
R + G + LH ++ + ++ +A R ATG Y
Sbjct: 186 RQEGFGPFDSQVHRGRRMSASRAYLHPAMKRKNLTVETRAFVTEIHYEGRRATGV---TY 242
Query: 267 LKNGP-----KNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDNP 313
KNG NE+I+S GA +PQLL LSG + I + P VG+ D+
Sbjct: 243 KKNGKLHTIDANEVILSGGAFNTPQLLQLSGIGDSEFLKSKGIEPRVHLPGVGENFEDHL 302
Query: 314 MNAIFVPSPVPV------EVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKI 367
I PV ++ + +G+ + AA+ +F GG + + P +
Sbjct: 303 EVYIQHKCKEPVSLQPSLDIKRMPFIGLQWIFTRTGAAASNHFEGGGFVRSNNEVDYPNL 362
Query: 368 GQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPV---STGHLELRTRNPN 424
+P IA + KA A G+ + +GP+ S G L++++++P
Sbjct: 363 -MFHFLP--------IAVRYDGQKA----AVAHGYQVH--VGPMYSNSRGSLKIKSKDPF 407
Query: 425 DNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLL 484
+ PS+ FNY ED + V+ I I+ K+ F +S P T ++ +
Sbjct: 408 EKPSIRFNYLSTEEDKKEWVEAIRVARNILSQKAMDPFNGGEIS-PGPEVQTDEEILDWV 466
Query: 485 PRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDH-DYKVLGVDALRVIDGSTFYYSPG 543
R + T+L C + VVD KV G++ LRV+D S +
Sbjct: 467 RR--DGETALHPSCSAKMGP------ASDPMAVVDPLTMKVHGMENLRVVDASAMPRTTN 518
Query: 544 TNPQATVMML 553
N A V+ML
Sbjct: 519 GNIHAPVLML 528
>sp|A6QK99|BETA_STAAE Choline dehydrogenase OS=Staphylococcus aureus (strain Newman)
GN=betA PE=3 SV=1
Length = 569
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 134/550 (24%), Positives = 220/550 (40%), Gaps = 73/550 (13%)
Query: 48 YDYIIIGGGTAGCPLAATLSQNAS--VLLLERGGSPYGNPNITNLGSF-----GAALSDL 100
YDY+IIGGG+AG L LS++ VL+LE G S Y + + G D
Sbjct: 8 YDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPSGNKFYDW 67
Query: 101 SSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREVGWDERLVNESYQWVE 160
++ + + V ++R +VLGG S +N Y R P + GW E E++ +
Sbjct: 68 IYSTDEEPHMGGRKVAHARGKVLGGSSSINGMIYQRGNP--MDYEGWAEPEGMETWDFAH 125
Query: 161 KVVAFEPPMRQWQSAV------RDGLVEVGVLPYNGFTYDHMYGTKIGGTIF---DQNGQ 211
+ F+ + + +A DG +++ P + + + D NG
Sbjct: 126 CLPYFKKLEKTYGAAPYDKFRGHDGPIKLKRGPATNPLFQSFFDAGVEAGYHKTPDVNGF 185
Query: 212 RHTAADLLEYANPSGLTL-----LLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAY 266
R + G + LH ++ + ++ +A R ATG Y
Sbjct: 186 RQEGFGPFDSQVHRGRRMSASRAYLHPAMKRKNLTVETRAFVTEIHYEGRRATGV---TY 242
Query: 267 LKNGP-----KNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDNP 313
KNG NE+I+S GA +PQLL LSG + I + P VG+ D+
Sbjct: 243 KKNGKLHTIDANEVILSGGAFNTPQLLQLSGIGDSEFLKSKGIEPRVHLPGVGENFEDHL 302
Query: 314 MNAIFVPSPVPV------EVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKI 367
I PV ++ + +G+ + AA+ +F GG + + P +
Sbjct: 303 EVYIQHKCKEPVSLQPSLDIKRMPFIGLQWIFTRTGAAASNHFEGGGFVRSNNEVDYPNL 362
Query: 368 GQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPV---STGHLELRTRNPN 424
+P IA + KA A G+ + +GP+ S G L++++++P
Sbjct: 363 -MFHFLP--------IAVRYDGQKA----AVAHGYQVH--VGPMYSNSRGSLKIKSKDPF 407
Query: 425 DNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLL 484
+ PS+ FNY ED + V+ I I+ K+ F +S P T ++ +
Sbjct: 408 EKPSIRFNYLSTEEDKKEWVEAIRVARNILSQKAMDPFNGGEIS-PGPEVQTDEEILDWV 466
Query: 485 PRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDH-DYKVLGVDALRVIDGSTFYYSPG 543
R + T+L C + VVD KV G++ LRV+D S +
Sbjct: 467 RR--DGETALHPSCSAKMGP------ASDPMAVVDPLTMKVHGMENLRVVDASAMPRTTN 518
Query: 544 TNPQATVMML 553
N A V+ML
Sbjct: 519 GNIHAPVLML 528
>sp|Q5HCU1|BETA_STAAC Choline dehydrogenase OS=Staphylococcus aureus (strain COL) GN=betA
PE=3 SV=1
Length = 569
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 134/550 (24%), Positives = 220/550 (40%), Gaps = 73/550 (13%)
Query: 48 YDYIIIGGGTAGCPLAATLSQNAS--VLLLERGGSPYGNPNITNLGSF-----GAALSDL 100
YDY+IIGGG+AG L LS++ VL+LE G S Y + + G D
Sbjct: 8 YDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPSGNKFYDW 67
Query: 101 SSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREVGWDERLVNESYQWVE 160
++ + + V ++R +VLGG S +N Y R P + GW E E++ +
Sbjct: 68 IYSTDEEPHMGGRKVAHARGKVLGGSSSINGMIYQRGNP--MDYEGWAEPEGMETWDFAH 125
Query: 161 KVVAFEPPMRQWQSAV------RDGLVEVGVLPYNGFTYDHMYGTKIGGTIF---DQNGQ 211
+ F+ + + +A DG +++ P + + + D NG
Sbjct: 126 CLPYFKKLEKTYGAAPYDKFRGHDGPIKLKRGPATNPLFQSFFDAGVEAGYHKTPDVNGF 185
Query: 212 RHTAADLLEYANPSGLTL-----LLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAY 266
R + G + LH ++ + ++ +A R ATG Y
Sbjct: 186 RQEGFGPFDSQVHRGRRMSASRAYLHPAMKRKNLTVETRAFVTEIHYEGRRATGV---TY 242
Query: 267 LKNGP-----KNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDNP 313
KNG NE+I+S GA +PQLL LSG + I + P VG+ D+
Sbjct: 243 KKNGKLHTIDANEVILSGGAFNTPQLLQLSGIGDSEFLKSKGIEPRVHLPGVGENFEDHL 302
Query: 314 MNAIFVPSPVPV------EVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKI 367
I PV ++ + +G+ + AA+ +F GG + + P +
Sbjct: 303 EVYIQHKCKEPVSLQPSLDIKRMPFIGLQWIFTRTGAAASNHFEGGGFVRSNNEVDYPNL 362
Query: 368 GQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPV---STGHLELRTRNPN 424
+P IA + KA A G+ + +GP+ S G L++++++P
Sbjct: 363 -MFHFLP--------IAVRYDGQKA----AVAHGYQVH--VGPMYSNSRGSLKIKSKDPF 407
Query: 425 DNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLL 484
+ PS+ FNY ED + V+ I I+ K+ F +S P T ++ +
Sbjct: 408 EKPSIRFNYLSTEEDKKEWVEAIRVARNILSQKAMDPFNGGEIS-PGPEVQTDEEILDWV 466
Query: 485 PRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDH-DYKVLGVDALRVIDGSTFYYSPG 543
R + T+L C + VVD KV G++ LRV+D S +
Sbjct: 467 RR--DGETALHPSCSAKMGP------ASDPMAVVDPLTMKVHGMENLRVVDASAMPRTTN 518
Query: 544 TNPQATVMML 553
N A V+ML
Sbjct: 519 GNIHAPVLML 528
>sp|Q2YWJ5|BETA_STAAB Choline dehydrogenase OS=Staphylococcus aureus (strain bovine RF122
/ ET3-1) GN=betA PE=3 SV=1
Length = 569
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 134/550 (24%), Positives = 220/550 (40%), Gaps = 73/550 (13%)
Query: 48 YDYIIIGGGTAGCPLAATLSQNAS--VLLLERGGSPYGNPNITNLGSF-----GAALSDL 100
YDY+IIGGG+AG L LS++ VL+LE G S Y + + G D
Sbjct: 8 YDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPSGNKFYDW 67
Query: 101 SSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREVGWDERLVNESYQWVE 160
++ + + V ++R +VLGG S +N Y R P + GW E E++ +
Sbjct: 68 IYSTDEEPHMGGRKVAHARGKVLGGSSSINGMIYQRGNP--MDYEGWAEPEGMETWDFAH 125
Query: 161 KVVAFEPPMRQWQSAV------RDGLVEVGVLPYNGFTYDHMYGTKIGGTIF---DQNGQ 211
+ F+ + + +A DG +++ P + + + D NG
Sbjct: 126 CLPYFKKLEKTYGAAPYDKFRGHDGPIKLKRGPATNPLFQSFFDAGVEAGYHKTPDVNGF 185
Query: 212 RHTAADLLEYANPSGLTL-----LLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAY 266
R + G + LH ++ + ++ +A R ATG Y
Sbjct: 186 RQEGFGPFDSQVHRGRRMSASRAYLHPAMKRKNLTVETRAFVTEIHYEGRRATGV---TY 242
Query: 267 LKNGP-----KNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDNP 313
KNG NE+I+S GA +PQLL LSG + I + P VG+ D+
Sbjct: 243 KKNGKLHTIDANEVILSGGAFNTPQLLQLSGIGDSEFLKSKGIEPRVHLPGVGENFEDHL 302
Query: 314 MNAIFVPSPVPV------EVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKI 367
I PV ++ + +G+ + AA+ +F GG + + P +
Sbjct: 303 EVYIQHKCKEPVSLQPSLDIKRMPFIGLQWIFTRTGAAASNHFEGGGFVRSNNEVDYPNL 362
Query: 368 GQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPV---STGHLELRTRNPN 424
+P IA + KA A G+ + +GP+ S G L++++++P
Sbjct: 363 -MFHFLP--------IAVRYDGQKA----AVAHGYQVH--VGPMYSNSRGSLKIKSKDPF 407
Query: 425 DNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLL 484
+ PS+ FNY ED + V+ I I+ K+ F +S P T ++ +
Sbjct: 408 EKPSIRFNYLSTEEDKKEWVEAIRVARNILSQKAMDPFNGGEIS-PGPEVQTDEEILDWV 466
Query: 485 PRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDH-DYKVLGVDALRVIDGSTFYYSPG 543
R + T+L C + VVD KV G++ LRV+D S +
Sbjct: 467 RR--DGETALHPSCSAKMGP------ASDPMAVVDPLTMKVHGMENLRVVDASAMPRTTN 518
Query: 544 TNPQATVMML 553
N A V+ML
Sbjct: 519 GNIHAPVLML 528
>sp|A5IW37|BETA_STAA9 Choline dehydrogenase OS=Staphylococcus aureus (strain JH9) GN=betA
PE=3 SV=1
Length = 569
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 134/550 (24%), Positives = 220/550 (40%), Gaps = 73/550 (13%)
Query: 48 YDYIIIGGGTAGCPLAATLSQNAS--VLLLERGGSPYGNPNITNLGSF-----GAALSDL 100
YDY+IIGGG+AG L LS++ VL+LE G S Y + + G D
Sbjct: 8 YDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPSGNKFYDW 67
Query: 101 SSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREVGWDERLVNESYQWVE 160
++ + + V ++R +VLGG S +N Y R P + GW E E++ +
Sbjct: 68 IYSTDEEPHMGGRKVAHARGKVLGGSSSINGMIYQRGNP--MDYEGWAEPEGMETWDFAH 125
Query: 161 KVVAFEPPMRQWQSAV------RDGLVEVGVLPYNGFTYDHMYGTKIGGTIF---DQNGQ 211
+ F+ + + +A DG +++ P + + + D NG
Sbjct: 126 CLPYFKKLEKTYGAAPYDKFRGHDGPIKLKRGPATNPLFQSFFDAGVEAGYHKTPDVNGF 185
Query: 212 RHTAADLLEYANPSGLTL-----LLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAY 266
R + G + LH ++ + ++ +A R ATG Y
Sbjct: 186 RQEGFGPFDSQVHRGRRMSASRAYLHPAMKRKNLTVETRAFVTEIHYEGRRATGV---TY 242
Query: 267 LKNGP-----KNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDNP 313
KNG NE+I+S GA +PQLL LSG + I + P VG+ D+
Sbjct: 243 KKNGKLHTIDANEVILSGGAFNTPQLLQLSGIGDSEFLKSKGIEPRVHLPGVGENFEDHL 302
Query: 314 MNAIFVPSPVPV------EVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKI 367
I PV ++ + +G+ + AA+ +F GG + + P +
Sbjct: 303 EVYIQHKCKEPVSLQPSLDIKRMPFIGLQWIFTRTGAAASNHFEGGGFVRSNNEVDYPNL 362
Query: 368 GQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPV---STGHLELRTRNPN 424
+P IA + KA A G+ + +GP+ S G L++++++P
Sbjct: 363 -MFHFLP--------IAVRYDGQKA----AVAHGYQVH--VGPMYSNSRGSLKIKSKDPF 407
Query: 425 DNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLL 484
+ PS+ FNY ED + V+ I I+ K+ F +S P T ++ +
Sbjct: 408 EKPSIRFNYLSTEEDKKEWVEAIRVARNILSQKAMDPFNGGEIS-PGPEVQTDEEILDWV 466
Query: 485 PRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDH-DYKVLGVDALRVIDGSTFYYSPG 543
R + T+L C + VVD KV G++ LRV+D S +
Sbjct: 467 RR--DGETALHPSCSAKMGP------ASDPMAVVDPLTMKVHGMENLRVVDASAMPRTTN 518
Query: 544 TNPQATVMML 553
N A V+ML
Sbjct: 519 GNIHAPVLML 528
>sp|Q2FV11|BETA_STAA8 Choline dehydrogenase OS=Staphylococcus aureus (strain NCTC 8325)
GN=betA PE=3 SV=1
Length = 569
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 134/550 (24%), Positives = 220/550 (40%), Gaps = 73/550 (13%)
Query: 48 YDYIIIGGGTAGCPLAATLSQNAS--VLLLERGGSPYGNPNITNLGSF-----GAALSDL 100
YDY+IIGGG+AG L LS++ VL+LE G S Y + + G D
Sbjct: 8 YDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPSGNKFYDW 67
Query: 101 SSTSPSQRFISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREVGWDERLVNESYQWVE 160
++ + + V ++R +VLGG S +N Y R P + GW E E++ +
Sbjct: 68 IYSTDEEPHMGGRKVAHARGKVLGGSSSINGMIYQRGNP--MDYEGWAEPEGMETWDFAH 125
Query: 161 KVVAFEPPMRQWQSAV------RDGLVEVGVLPYNGFTYDHMYGTKIGGTIF---DQNGQ 211
+ F+ + + +A DG +++ P + + + D NG
Sbjct: 126 CLPYFKKLEKTYGAAPYDKFRGHDGPIKLKRGPATNPLFQSFFDAGVEAGYHKTPDVNGF 185
Query: 212 RHTAADLLEYANPSGLTL-----LLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAY 266
R + G + LH ++ + ++ +A R ATG Y
Sbjct: 186 RQEGFGPFDSQVHRGRRMSASRAYLHPAMKRKNLTVETRAFVTEIHYEGRRATGV---TY 242
Query: 267 LKNGP-----KNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDNP 313
KNG NE+I+S GA +PQLL LSG + I + P VG+ D+
Sbjct: 243 KKNGKLHTIDANEVILSGGAFNTPQLLQLSGIGDSEFLKSKGIEPRVHLPGVGENFEDHL 302
Query: 314 MNAIFVPSPVPV------EVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKI 367
I PV ++ + +G+ + AA+ +F GG + + P +
Sbjct: 303 EVYIQHKCKEPVSLQPSLDIKRMPFIGLQWIFTRTGAAASNHFEGGGFVRSNNEVDYPNL 362
Query: 368 GQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPV---STGHLELRTRNPN 424
+P IA + KA A G+ + +GP+ S G L++++++P
Sbjct: 363 -MFHFLP--------IAVRYDGQKA----AVAHGYQVH--VGPMYSNSRGSLKIKSKDPF 407
Query: 425 DNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLL 484
+ PS+ FNY ED + V+ I I+ K+ F +S P T ++ +
Sbjct: 408 EKPSIRFNYLSTEEDKKEWVEAIRVARNILSQKAMDPFNGGEIS-PGPEVQTDEEILDWV 466
Query: 485 PRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDH-DYKVLGVDALRVIDGSTFYYSPG 543
R + T+L C + VVD KV G++ LRV+D S +
Sbjct: 467 RR--DGETALHPSCSAKMGP------ASDPMAVVDPLTMKVHGMENLRVVDASAMPRTTN 518
Query: 544 TNPQATVMML 553
N A V+ML
Sbjct: 519 GNIHAPVLML 528
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 226,655,791
Number of Sequences: 539616
Number of extensions: 10179024
Number of successful extensions: 25172
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 24378
Number of HSP's gapped (non-prelim): 517
length of query: 575
length of database: 191,569,459
effective HSP length: 123
effective length of query: 452
effective length of database: 125,196,691
effective search space: 56588904332
effective search space used: 56588904332
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)