Query 008163
Match_columns 575
No_of_seqs 217 out of 1796
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 19:38:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008163.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008163hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fim_B ARYL-alcohol oxidase; A 100.0 2.1E-75 7.1E-80 630.6 30.8 487 47-564 2-565 (566)
2 1ju2_A HydroxynitrIle lyase; f 100.0 1.1E-74 3.7E-79 625.9 34.1 493 32-564 11-516 (536)
3 3qvp_A Glucose oxidase; oxidor 100.0 2.1E-74 7.2E-79 623.3 34.2 478 44-566 16-580 (583)
4 3q9t_A Choline dehydrogenase a 100.0 2.8E-71 9.5E-76 599.7 33.3 485 45-565 4-573 (577)
5 1gpe_A Protein (glucose oxidas 100.0 2.8E-69 9.6E-74 588.8 35.4 491 45-567 22-585 (587)
6 3t37_A Probable dehydrogenase; 100.0 5.6E-69 1.9E-73 584.0 34.7 462 46-562 16-521 (526)
7 2jbv_A Choline oxidase; alcoho 100.0 2.8E-67 9.6E-72 569.2 34.2 473 45-569 11-534 (546)
8 1kdg_A CDH, cellobiose dehydro 100.0 1.3E-58 4.3E-63 503.7 23.5 469 45-565 5-543 (546)
9 1n4w_A CHOD, cholesterol oxida 100.0 8.5E-58 2.9E-62 491.3 27.0 440 46-566 4-501 (504)
10 1coy_A Cholesterol oxidase; ox 100.0 8.7E-57 3E-61 483.4 25.5 435 43-565 7-505 (507)
11 3pl8_A Pyranose 2-oxidase; sub 100.0 6.5E-45 2.2E-49 398.7 26.7 455 44-568 43-616 (623)
12 4at0_A 3-ketosteroid-delta4-5a 99.6 1.3E-14 4.5E-19 155.8 16.4 62 218-289 208-271 (510)
13 1qo8_A Flavocytochrome C3 fuma 99.5 1.7E-13 5.6E-18 149.1 15.3 189 45-289 119-318 (566)
14 1y0p_A Fumarate reductase flav 99.5 2.4E-13 8.3E-18 148.0 16.3 189 45-288 124-322 (571)
15 1d4d_A Flavocytochrome C fumar 99.4 3.9E-12 1.3E-16 138.2 16.6 62 218-289 261-324 (572)
16 2bs2_A Quinol-fumarate reducta 99.4 4E-12 1.4E-16 139.5 15.6 57 218-284 164-221 (660)
17 2h88_A Succinate dehydrogenase 99.4 4.4E-12 1.5E-16 138.2 15.2 57 218-284 161-218 (621)
18 2wdq_A Succinate dehydrogenase 99.3 9.9E-12 3.4E-16 135.2 14.0 58 218-284 149-207 (588)
19 1chu_A Protein (L-aspartate ox 99.3 1.8E-11 6.2E-16 131.8 13.7 62 218-284 144-209 (540)
20 3dme_A Conserved exported prot 99.3 5.2E-12 1.8E-16 129.4 8.5 61 218-291 156-216 (369)
21 1kf6_A Fumarate reductase flav 99.2 7.4E-11 2.5E-15 128.6 16.0 58 218-285 140-199 (602)
22 2i0z_A NAD(FAD)-utilizing dehy 99.2 5.3E-11 1.8E-15 125.5 12.9 54 218-285 140-193 (447)
23 3da1_A Glycerol-3-phosphate de 99.2 5E-11 1.7E-15 129.1 12.0 64 218-292 176-240 (561)
24 3v76_A Flavoprotein; structura 99.2 1.5E-11 5E-16 128.1 7.2 39 43-81 23-62 (417)
25 3nyc_A D-arginine dehydrogenas 99.2 2.9E-11 9.8E-16 124.5 9.0 37 45-81 7-43 (381)
26 1y56_B Sarcosine oxidase; dehy 99.2 5.2E-11 1.8E-15 122.8 9.4 59 218-292 155-213 (382)
27 1jnr_A Adenylylsulfate reducta 99.1 2.3E-10 8E-15 125.8 13.6 60 218-284 157-219 (643)
28 2rgh_A Alpha-glycerophosphate 99.1 6.5E-10 2.2E-14 120.6 16.4 64 218-292 194-258 (571)
29 3dje_A Fructosyl amine: oxygen 99.1 3.1E-11 1E-15 127.0 5.7 39 44-82 3-43 (438)
30 2gqf_A Hypothetical protein HI 99.1 5.2E-11 1.8E-15 123.5 6.4 37 45-81 2-39 (401)
31 3gyx_A Adenylylsulfate reducta 99.1 1.1E-10 3.7E-15 128.1 8.2 59 218-283 172-233 (662)
32 2qcu_A Aerobic glycerol-3-phos 99.1 1.7E-09 5.9E-14 115.6 16.1 60 218-289 155-215 (501)
33 1pj5_A N,N-dimethylglycine oxi 99.0 3.3E-10 1.1E-14 128.7 10.2 59 218-292 157-215 (830)
34 2oln_A NIKD protein; flavoprot 99.0 5.9E-10 2E-14 115.6 11.1 36 46-81 3-39 (397)
35 2gag_B Heterotetrameric sarcos 99.0 1.3E-09 4.5E-14 113.1 13.6 59 218-292 180-238 (405)
36 2e5v_A L-aspartate oxidase; ar 99.0 7.5E-10 2.6E-14 117.3 11.5 52 218-283 125-176 (472)
37 3pvc_A TRNA 5-methylaminomethy 99.0 1.6E-09 5.4E-14 120.5 13.7 36 46-81 263-299 (689)
38 3ps9_A TRNA 5-methylaminomethy 99.0 5E-10 1.7E-14 124.3 9.6 35 46-80 271-306 (676)
39 1ryi_A Glycine oxidase; flavop 99.0 1.2E-09 4.3E-14 112.3 10.8 38 43-80 13-51 (382)
40 3oz2_A Digeranylgeranylglycero 98.9 8.6E-10 2.9E-14 113.8 7.8 56 218-285 108-163 (397)
41 3axb_A Putative oxidoreductase 98.9 1.3E-09 4.6E-14 114.8 9.1 33 46-78 22-56 (448)
42 2gf3_A MSOX, monomeric sarcosi 98.9 1.5E-09 5.3E-14 111.9 8.2 35 47-81 3-38 (389)
43 4dgk_A Phytoene dehydrogenase; 98.9 5.5E-10 1.9E-14 119.5 4.8 70 207-290 216-285 (501)
44 3ka7_A Oxidoreductase; structu 98.9 4.7E-09 1.6E-13 109.7 10.1 57 218-289 202-258 (425)
45 1rp0_A ARA6, thiazole biosynth 98.9 1.6E-08 5.5E-13 99.7 13.3 36 46-81 38-75 (284)
46 3cgv_A Geranylgeranyl reductas 98.9 8.6E-09 2.9E-13 106.5 11.7 55 218-283 108-162 (397)
47 3nlc_A Uncharacterized protein 98.8 4.5E-09 1.5E-13 112.5 8.9 36 45-80 105-141 (549)
48 3e1t_A Halogenase; flavoprotei 98.8 1.8E-08 6.2E-13 108.0 13.4 55 218-282 117-171 (512)
49 2uzz_A N-methyl-L-tryptophan o 98.8 2.5E-09 8.6E-14 109.6 6.3 35 47-81 2-37 (372)
50 3atr_A Conserved archaeal prot 98.8 6.7E-09 2.3E-13 109.6 9.5 56 218-283 106-162 (453)
51 3p1w_A Rabgdi protein; GDI RAB 98.8 9.4E-09 3.2E-13 107.7 9.5 43 43-85 16-59 (475)
52 3nix_A Flavoprotein/dehydrogen 98.8 2E-08 6.9E-13 104.7 12.0 35 46-80 4-39 (421)
53 3jsk_A Cypbp37 protein; octame 98.7 5.4E-08 1.8E-12 97.3 12.5 36 46-81 78-116 (344)
54 3i3l_A Alkylhalidase CMLS; fla 98.7 2.4E-08 8.3E-13 108.3 9.9 53 218-281 134-186 (591)
55 3nrn_A Uncharacterized protein 98.7 3.5E-08 1.2E-12 103.0 10.2 37 48-84 1-38 (421)
56 3qj4_A Renalase; FAD/NAD(P)-bi 98.6 3.8E-08 1.3E-12 99.7 7.5 34 48-81 2-39 (342)
57 3c4n_A Uncharacterized protein 98.6 2.5E-08 8.6E-13 103.6 5.7 36 46-81 35-73 (405)
58 2zxi_A TRNA uridine 5-carboxym 98.6 6.4E-08 2.2E-12 104.1 8.1 34 46-79 26-60 (637)
59 3ces_A MNMG, tRNA uridine 5-ca 98.6 7.3E-08 2.5E-12 104.1 7.8 35 45-79 26-61 (651)
60 2gjc_A Thiazole biosynthetic e 98.6 4.7E-07 1.6E-11 89.9 13.0 36 46-81 64-102 (326)
61 2cul_A Glucose-inhibited divis 98.6 3E-07 1E-11 87.6 11.1 34 46-79 2-36 (232)
62 3f8d_A Thioredoxin reductase ( 98.5 1.8E-06 6.1E-11 86.1 16.9 61 221-292 199-260 (323)
63 4a9w_A Monooxygenase; baeyer-v 98.5 1.4E-07 4.7E-12 95.6 8.7 35 47-81 3-38 (357)
64 3ihg_A RDME; flavoenzyme, anth 98.5 6.7E-07 2.3E-11 96.3 14.3 37 45-81 3-40 (535)
65 2gmh_A Electron transfer flavo 98.5 1.9E-07 6.5E-12 101.5 9.6 59 218-285 150-219 (584)
66 1yvv_A Amine oxidase, flavin-c 98.5 2.3E-07 7.8E-12 93.4 9.2 35 47-81 2-37 (336)
67 2qa1_A PGAE, polyketide oxygen 98.5 5E-07 1.7E-11 96.3 12.2 39 43-81 7-46 (500)
68 3cp8_A TRNA uridine 5-carboxym 98.5 1.5E-07 5.2E-12 101.5 7.7 36 44-79 18-54 (641)
69 3rp8_A Flavoprotein monooxygen 98.4 6.3E-07 2.1E-11 93.0 10.9 39 43-81 19-58 (407)
70 2qa2_A CABE, polyketide oxygen 98.4 1.5E-06 5E-11 92.6 13.3 38 44-81 9-47 (499)
71 2x3n_A Probable FAD-dependent 98.4 5.4E-07 1.9E-11 93.1 9.7 35 46-80 5-40 (399)
72 3fmw_A Oxygenase; mithramycin, 98.4 5.5E-07 1.9E-11 97.4 9.8 36 46-81 48-84 (570)
73 2vou_A 2,6-dihydroxypyridine h 98.4 1.5E-06 5.2E-11 89.7 12.1 35 46-80 4-39 (397)
74 2bry_A NEDD9 interacting prote 98.4 2.1E-07 7.2E-12 99.1 5.4 38 44-81 89-127 (497)
75 3lxd_A FAD-dependent pyridine 98.3 7.2E-07 2.5E-11 92.8 8.4 60 219-292 201-260 (415)
76 3itj_A Thioredoxin reductase 1 98.3 5.1E-07 1.7E-11 90.8 7.0 55 223-287 220-275 (338)
77 3i6d_A Protoporphyrinogen oxid 98.3 6.2E-07 2.1E-11 94.7 7.4 37 47-83 5-48 (470)
78 2gv8_A Monooxygenase; FMO, FAD 98.3 1.9E-06 6.5E-11 90.5 10.9 38 45-82 4-44 (447)
79 3kkj_A Amine oxidase, flavin-c 98.3 2.5E-07 8.5E-12 89.5 3.2 36 47-82 2-38 (336)
80 2zbw_A Thioredoxin reductase; 98.3 1.4E-06 4.9E-11 87.5 8.9 36 45-80 3-39 (335)
81 4ap3_A Steroid monooxygenase; 98.3 2.2E-06 7.4E-11 92.3 9.8 37 45-81 19-56 (549)
82 3d1c_A Flavin-containing putat 98.3 2.4E-06 8.4E-11 87.0 9.8 33 47-79 4-38 (369)
83 3gwf_A Cyclohexanone monooxyge 98.2 1.9E-06 6.4E-11 92.6 8.8 36 46-81 7-44 (540)
84 2r0c_A REBC; flavin adenine di 98.2 4.4E-06 1.5E-10 90.1 11.6 37 45-81 24-61 (549)
85 3s5w_A L-ornithine 5-monooxyge 98.2 3.5E-06 1.2E-10 88.8 10.5 36 46-81 29-70 (463)
86 3fg2_P Putative rubredoxin red 98.2 4.3E-06 1.5E-10 86.5 11.0 61 218-292 190-250 (404)
87 1k0i_A P-hydroxybenzoate hydro 98.2 2.7E-06 9.4E-11 87.6 8.7 33 47-79 2-35 (394)
88 4fk1_A Putative thioredoxin re 98.2 6E-07 2.1E-11 89.1 3.1 36 44-79 3-39 (304)
89 3r9u_A Thioredoxin reductase; 98.2 8.3E-06 2.8E-10 80.9 11.4 58 221-288 192-249 (315)
90 1w4x_A Phenylacetone monooxyge 98.2 4.1E-06 1.4E-10 90.2 9.7 37 45-81 14-51 (542)
91 3uox_A Otemo; baeyer-villiger 98.2 3.3E-06 1.1E-10 90.8 8.7 37 45-81 7-44 (545)
92 3lzw_A Ferredoxin--NADP reduct 98.1 3.4E-06 1.2E-10 84.4 8.0 34 47-80 7-41 (332)
93 4gut_A Lysine-specific histone 98.1 1.1E-05 3.8E-10 89.9 12.3 38 46-83 335-373 (776)
94 4gcm_A TRXR, thioredoxin reduc 98.1 1.3E-06 4.4E-11 87.0 3.1 34 46-79 5-39 (312)
95 2bcg_G Secretory pathway GDP d 98.1 1.7E-06 5.9E-11 91.0 3.8 43 44-86 8-51 (453)
96 3fbs_A Oxidoreductase; structu 98.0 1.6E-05 5.3E-10 78.1 10.5 33 47-79 2-35 (297)
97 2xve_A Flavin-containing monoo 98.0 1.2E-05 3.9E-10 84.9 9.9 35 48-82 3-44 (464)
98 2q0l_A TRXR, thioredoxin reduc 98.0 8.7E-06 3E-10 80.8 8.6 31 48-78 2-34 (311)
99 4a5l_A Thioredoxin reductase; 98.0 1.3E-06 4.6E-11 86.8 2.5 37 44-80 1-38 (314)
100 2pyx_A Tryptophan halogenase; 98.0 1.7E-05 5.8E-10 85.1 11.0 35 46-80 6-53 (526)
101 4gde_A UDP-galactopyranose mut 98.0 1.7E-06 5.9E-11 92.4 2.9 40 45-84 8-49 (513)
102 3fpz_A Thiazole biosynthetic e 98.0 2.2E-06 7.5E-11 86.0 3.4 37 46-82 64-103 (326)
103 1c0p_A D-amino acid oxidase; a 98.0 3.5E-06 1.2E-10 85.8 3.9 37 44-80 3-40 (363)
104 1q1r_A Putidaredoxin reductase 98.0 1.3E-05 4.4E-10 83.7 8.2 60 219-292 198-259 (431)
105 1hyu_A AHPF, alkyl hydroperoxi 97.9 6.5E-05 2.2E-09 80.3 12.7 59 220-288 398-458 (521)
106 2weu_A Tryptophan 5-halogenase 97.9 4.7E-05 1.6E-09 81.3 11.1 34 47-80 2-39 (511)
107 3k7m_X 6-hydroxy-L-nicotine ox 97.8 5.4E-06 1.8E-10 86.5 2.8 36 48-83 2-38 (431)
108 2xdo_A TETX2 protein; tetracyc 97.8 9.1E-06 3.1E-10 83.9 4.5 42 40-81 19-61 (398)
109 3iwa_A FAD-dependent pyridine 97.8 0.0002 6.8E-09 75.6 13.7 60 218-292 208-267 (472)
110 1v0j_A UDP-galactopyranose mut 97.7 1.3E-05 4.5E-10 82.7 3.7 41 44-84 4-46 (399)
111 3hdq_A UDP-galactopyranose mut 97.7 1.3E-05 4.4E-10 82.2 3.5 40 44-83 26-66 (397)
112 3c96_A Flavin-containing monoo 97.7 1.2E-05 4E-10 83.4 3.2 37 45-81 2-40 (410)
113 3ef6_A Toluene 1,2-dioxygenase 97.7 4E-05 1.4E-09 79.4 7.1 58 220-292 193-250 (410)
114 3qfa_A Thioredoxin reductase 1 97.7 1.2E-05 4.1E-10 86.0 3.2 44 36-79 21-65 (519)
115 2ivd_A PPO, PPOX, protoporphyr 97.7 1.4E-05 4.7E-10 84.6 3.6 44 42-85 11-55 (478)
116 1s3e_A Amine oxidase [flavin-c 97.7 1.3E-05 4.4E-10 85.9 3.2 39 46-84 3-42 (520)
117 3urh_A Dihydrolipoyl dehydroge 97.7 1.4E-05 4.8E-10 85.0 3.4 39 44-82 22-61 (491)
118 2b9w_A Putative aminooxidase; 97.7 1.8E-05 6.2E-10 82.3 4.1 39 46-84 5-45 (424)
119 3o0h_A Glutathione reductase; 97.7 1.4E-05 4.8E-10 84.7 3.2 33 46-78 25-58 (484)
120 1i8t_A UDP-galactopyranose mut 97.7 1.7E-05 5.9E-10 80.8 3.5 38 47-84 1-39 (367)
121 1d5t_A Guanine nucleotide diss 97.7 2.1E-05 7.2E-10 82.1 4.2 42 44-85 3-45 (433)
122 4b63_A L-ornithine N5 monooxyg 97.7 9.8E-05 3.3E-09 78.5 9.4 61 216-281 148-212 (501)
123 1rsg_A FMS1 protein; FAD bindi 97.7 1.2E-05 4E-10 86.1 2.3 40 46-85 7-48 (516)
124 2jae_A L-amino acid oxidase; o 97.7 2.2E-05 7.6E-10 83.3 4.3 40 45-84 9-49 (489)
125 3cty_A Thioredoxin reductase; 97.7 1.5E-05 5.2E-10 79.4 2.8 35 44-78 13-48 (319)
126 3lad_A Dihydrolipoamide dehydr 97.7 1.8E-05 6.1E-10 83.8 3.4 36 46-81 2-38 (476)
127 3ics_A Coenzyme A-disulfide re 97.6 0.0001 3.5E-09 80.1 9.4 36 45-80 34-72 (588)
128 2yg5_A Putrescine oxidase; oxi 97.6 1.5E-05 5E-10 83.8 2.5 39 46-84 4-43 (453)
129 3alj_A 2-methyl-3-hydroxypyrid 97.6 2.1E-05 7.1E-10 80.6 3.4 36 46-81 10-46 (379)
130 3l8k_A Dihydrolipoyl dehydroge 97.6 1.7E-05 5.8E-10 83.7 2.6 37 46-82 3-40 (466)
131 1sez_A Protoporphyrinogen oxid 97.6 3E-05 1E-09 82.6 4.2 41 44-84 10-51 (504)
132 3g3e_A D-amino-acid oxidase; F 97.6 2.4E-05 8.1E-10 79.2 3.2 31 49-79 2-39 (351)
133 2e1m_A L-glutamate oxidase; L- 97.6 2.8E-05 9.7E-10 79.0 3.7 40 44-83 41-82 (376)
134 4dna_A Probable glutathione re 97.6 2.6E-05 8.9E-10 82.2 3.6 33 46-78 4-37 (463)
135 3cgb_A Pyridine nucleotide-dis 97.6 0.00018 6.2E-09 76.0 10.1 33 48-80 37-72 (480)
136 3ab1_A Ferredoxin--NADP reduct 97.6 2.8E-05 9.5E-10 78.9 3.3 38 44-81 11-49 (360)
137 3klj_A NAD(FAD)-dependent dehy 97.6 0.00017 5.8E-09 73.9 9.1 36 45-80 7-43 (385)
138 3nks_A Protoporphyrinogen oxid 97.6 3.1E-05 1.1E-09 81.8 3.6 37 48-84 3-42 (477)
139 3dk9_A Grase, GR, glutathione 97.5 2.3E-05 7.9E-10 82.9 2.4 37 43-79 16-53 (478)
140 3ihm_A Styrene monooxygenase A 97.5 2.6E-05 8.9E-10 81.4 2.5 33 47-79 22-55 (430)
141 2q7v_A Thioredoxin reductase; 97.5 3.1E-05 1E-09 77.4 2.8 34 45-78 6-40 (325)
142 3lov_A Protoporphyrinogen oxid 97.5 3.7E-05 1.3E-09 81.2 3.5 37 47-83 4-43 (475)
143 4dsg_A UDP-galactopyranose mut 97.5 3.8E-05 1.3E-09 81.3 3.5 40 44-83 6-47 (484)
144 3ic9_A Dihydrolipoamide dehydr 97.5 2.7E-05 9.3E-10 82.7 2.4 33 47-79 8-41 (492)
145 3dgh_A TRXR-1, thioredoxin red 97.5 3.4E-05 1.2E-09 81.8 3.0 34 45-78 7-41 (483)
146 2vvm_A Monoamine oxidase N; FA 97.5 3.7E-05 1.3E-09 81.7 3.1 38 47-84 39-77 (495)
147 4b1b_A TRXR, thioredoxin reduc 97.5 4.2E-05 1.4E-09 81.8 3.4 34 47-80 42-76 (542)
148 2bi7_A UDP-galactopyranose mut 97.5 5.7E-05 2E-09 77.4 4.1 37 47-83 3-40 (384)
149 1ges_A Glutathione reductase; 97.5 4.6E-05 1.6E-09 80.0 3.3 35 45-79 2-37 (450)
150 2r9z_A Glutathione amide reduc 97.5 4.3E-05 1.5E-09 80.5 3.1 35 45-79 2-37 (463)
151 2ywl_A Thioredoxin reductase r 97.4 5.1E-05 1.8E-09 68.7 2.8 32 48-79 2-34 (180)
152 1zk7_A HGII, reductase, mercur 97.4 5.7E-05 2E-09 79.6 3.6 35 45-79 2-37 (467)
153 1mo9_A ORF3; nucleotide bindin 97.4 7.2E-05 2.5E-09 80.1 4.4 65 218-292 261-326 (523)
154 1ojt_A Surface protein; redox- 97.4 4.6E-05 1.6E-09 80.7 2.6 38 44-81 3-41 (482)
155 3dgz_A Thioredoxin reductase 2 97.4 5E-05 1.7E-09 80.5 2.6 34 46-79 5-39 (488)
156 2hqm_A GR, grase, glutathione 97.4 5.5E-05 1.9E-09 80.0 2.8 35 45-79 9-44 (479)
157 1v59_A Dihydrolipoamide dehydr 97.4 4.3E-05 1.5E-09 80.9 1.9 36 46-81 4-40 (478)
158 1trb_A Thioredoxin reductase; 97.4 4.4E-05 1.5E-09 75.9 1.9 33 46-78 4-37 (320)
159 3h8l_A NADH oxidase; membrane 97.4 0.00029 1E-08 72.7 8.1 31 49-79 3-37 (409)
160 3hyw_A Sulfide-quinone reducta 97.4 0.00044 1.5E-08 72.0 9.4 56 221-292 209-264 (430)
161 1dxl_A Dihydrolipoamide dehydr 97.4 8.9E-05 3E-09 78.2 4.0 37 46-82 5-42 (470)
162 2iid_A L-amino-acid oxidase; f 97.4 7.9E-05 2.7E-09 79.2 3.6 40 45-84 31-71 (498)
163 2qae_A Lipoamide, dihydrolipoy 97.3 8.4E-05 2.9E-09 78.4 3.4 35 47-81 2-37 (468)
164 3ntd_A FAD-dependent pyridine 97.3 0.00031 1.1E-08 75.9 8.0 33 48-80 2-37 (565)
165 2a87_A TRXR, TR, thioredoxin r 97.3 6.1E-05 2.1E-09 75.6 2.0 35 44-78 11-46 (335)
166 2eq6_A Pyruvate dehydrogenase 97.3 7.5E-05 2.6E-09 78.6 2.5 33 47-79 6-39 (464)
167 2yqu_A 2-oxoglutarate dehydrog 97.3 9.8E-05 3.4E-09 77.5 3.2 35 47-81 1-36 (455)
168 2a8x_A Dihydrolipoyl dehydroge 97.3 7.5E-05 2.6E-09 78.7 2.2 32 47-78 3-35 (464)
169 3g5s_A Methylenetetrahydrofola 97.3 0.0001 3.6E-09 74.1 2.9 34 48-81 2-36 (443)
170 1zmd_A Dihydrolipoyl dehydroge 97.3 9.8E-05 3.4E-09 78.0 3.0 36 46-81 5-41 (474)
171 1fl2_A Alkyl hydroperoxide red 97.3 0.00011 3.8E-09 72.6 3.1 31 47-77 1-32 (310)
172 3k30_A Histamine dehydrogenase 97.3 0.00016 5.4E-09 80.2 4.6 40 43-82 387-427 (690)
173 2dkh_A 3-hydroxybenzoate hydro 97.3 0.00015 5.1E-09 79.5 4.4 37 45-81 30-68 (639)
174 1onf_A GR, grase, glutathione 97.2 0.00011 3.9E-09 78.1 3.2 33 47-79 2-35 (500)
175 1vg0_A RAB proteins geranylger 97.2 0.00014 4.7E-09 78.6 3.7 41 45-85 6-47 (650)
176 1vdc_A NTR, NADPH dependent th 97.2 6.2E-05 2.1E-09 75.3 0.8 32 46-77 7-39 (333)
177 2vdc_G Glutamate synthase [NAD 97.2 0.00019 6.6E-09 75.2 4.6 38 45-82 120-158 (456)
178 2aqj_A Tryptophan halogenase, 97.2 0.00015 5.3E-09 77.8 3.9 35 46-80 4-42 (538)
179 1ebd_A E3BD, dihydrolipoamide 97.2 0.00012 4.1E-09 76.9 2.6 32 47-78 3-35 (455)
180 4hb9_A Similarities with proba 97.2 0.00014 4.8E-09 74.8 3.1 33 49-81 3-36 (412)
181 1b37_A Protein (polyamine oxid 97.2 0.00014 4.9E-09 76.7 3.1 39 46-84 3-43 (472)
182 1lvl_A Dihydrolipoamide dehydr 97.2 0.00014 4.8E-09 76.4 2.9 33 46-78 4-37 (458)
183 2e4g_A Tryptophan halogenase; 97.0 0.00032 1.1E-08 75.5 4.3 36 45-80 23-62 (550)
184 2v3a_A Rubredoxin reductase; a 97.0 0.00029 1E-08 72.1 3.7 60 218-292 193-252 (384)
185 3c4a_A Probable tryptophan hyd 97.0 0.00029 1E-08 72.0 3.2 33 49-81 2-37 (381)
186 2z3y_A Lysine-specific histone 97.0 0.00043 1.5E-08 76.2 4.4 39 45-83 105-144 (662)
187 2x8g_A Thioredoxin glutathione 97.0 0.00027 9.2E-09 77.0 2.8 34 45-78 105-139 (598)
188 1fec_A Trypanothione reductase 96.9 0.00039 1.3E-08 73.7 3.7 31 46-76 2-34 (490)
189 2wpf_A Trypanothione reductase 96.9 0.00028 9.6E-09 74.9 2.6 34 44-77 4-39 (495)
190 1ps9_A 2,4-dienoyl-COA reducta 96.9 0.00059 2E-08 75.3 4.8 39 45-83 371-410 (671)
191 3ab1_A Ferredoxin--NADP reduct 96.9 0.0067 2.3E-07 61.1 12.4 58 225-292 215-272 (360)
192 2xag_A Lysine-specific histone 96.8 0.00071 2.4E-08 76.0 4.9 39 45-83 276-315 (852)
193 1o94_A Tmadh, trimethylamine d 96.8 0.00061 2.1E-08 75.8 4.2 39 45-83 387-426 (729)
194 1mo9_A ORF3; nucleotide bindin 96.8 0.0062 2.1E-07 64.9 11.8 33 48-80 215-248 (523)
195 2v3a_A Rubredoxin reductase; a 96.8 0.0054 1.8E-07 62.5 10.6 33 48-80 146-179 (384)
196 1xhc_A NADH oxidase /nitrite r 96.8 0.00065 2.2E-08 69.0 3.7 34 47-81 8-42 (367)
197 1pn0_A Phenol 2-monooxygenase; 96.8 0.00047 1.6E-08 75.9 2.6 34 47-80 8-47 (665)
198 3kd9_A Coenzyme A disulfide re 96.7 0.00069 2.4E-08 70.9 3.8 36 47-82 3-41 (449)
199 1xdi_A RV3303C-LPDA; reductase 96.7 0.00051 1.7E-08 73.0 2.8 33 47-79 2-38 (499)
200 2bc0_A NADH oxidase; flavoprot 96.7 0.00056 1.9E-08 72.5 3.0 35 47-81 35-73 (490)
201 1trb_A Thioredoxin reductase; 96.7 0.0071 2.4E-07 59.7 10.9 55 223-287 195-251 (320)
202 1fl2_A Alkyl hydroperoxide red 96.7 0.0051 1.7E-07 60.5 9.7 54 225-288 193-247 (310)
203 1m6i_A Programmed cell death p 96.7 0.00083 2.8E-08 71.2 3.7 60 218-292 232-291 (493)
204 2gqw_A Ferredoxin reductase; f 96.7 0.00087 3E-08 69.2 3.7 36 46-81 6-44 (408)
205 2cdu_A NADPH oxidase; flavoenz 96.6 0.00077 2.6E-08 70.6 3.2 34 48-81 1-37 (452)
206 2gag_A Heterotetrameric sarcos 96.6 0.00067 2.3E-08 77.8 2.7 36 47-82 128-164 (965)
207 3oc4_A Oxidoreductase, pyridin 96.6 0.00096 3.3E-08 69.9 3.4 35 48-82 3-40 (452)
208 3cty_A Thioredoxin reductase; 96.6 0.0053 1.8E-07 60.6 8.7 57 225-291 203-260 (319)
209 1cjc_A Protein (adrenodoxin re 96.5 0.0013 4.5E-08 68.9 3.6 36 47-82 6-44 (460)
210 1lqt_A FPRA; NADP+ derivative, 96.5 0.0012 4.3E-08 69.0 3.4 36 47-82 3-46 (456)
211 2eq6_A Pyruvate dehydrogenase 96.4 0.013 4.3E-07 61.5 10.9 33 48-80 170-203 (464)
212 1y56_A Hypothetical protein PH 96.4 0.00085 2.9E-08 71.1 1.9 37 46-82 107-143 (493)
213 2q0l_A TRXR, thioredoxin reduc 96.4 0.018 6.2E-07 56.4 11.4 55 225-289 192-247 (311)
214 1nhp_A NADH peroxidase; oxidor 96.4 0.0014 4.8E-08 68.4 3.3 34 48-81 1-37 (447)
215 1gte_A Dihydropyrimidine dehyd 96.4 0.0015 5E-08 75.6 3.6 37 46-82 186-224 (1025)
216 2yqu_A 2-oxoglutarate dehydrog 96.4 0.011 3.8E-07 61.7 10.0 33 48-80 168-201 (455)
217 3h28_A Sulfide-quinone reducta 96.3 0.0018 6.3E-08 67.2 3.2 34 48-81 3-39 (430)
218 2zbw_A Thioredoxin reductase; 96.2 0.026 8.8E-07 56.0 11.2 32 48-79 153-185 (335)
219 1ebd_A E3BD, dihydrolipoamide 96.2 0.026 9.1E-07 58.8 11.6 33 48-80 171-204 (455)
220 3ayj_A Pro-enzyme of L-phenyla 96.2 0.0018 6.2E-08 70.8 2.7 36 46-81 55-100 (721)
221 1v59_A Dihydrolipoamide dehydr 96.1 0.026 9.1E-07 59.2 11.5 33 48-80 184-217 (478)
222 3sx6_A Sulfide-quinone reducta 96.1 0.0029 9.8E-08 65.9 3.7 34 48-81 5-42 (437)
223 2r9z_A Glutathione amide reduc 96.1 0.025 8.4E-07 59.2 10.9 33 48-80 167-200 (463)
224 2qae_A Lipoamide, dihydrolipoy 96.1 0.02 7E-07 59.9 10.2 33 48-80 175-208 (468)
225 3urh_A Dihydrolipoyl dehydroge 96.1 0.027 9.2E-07 59.4 11.2 33 48-80 199-232 (491)
226 1ges_A Glutathione reductase; 96.0 0.0092 3.1E-07 62.3 7.1 33 48-80 168-201 (450)
227 3ic9_A Dihydrolipoamide dehydr 96.0 0.023 7.9E-07 60.0 10.0 33 48-80 175-208 (492)
228 1lvl_A Dihydrolipoamide dehydr 95.9 0.02 6.9E-07 59.8 9.0 33 48-80 172-205 (458)
229 4g6h_A Rotenone-insensitive NA 95.9 0.0055 1.9E-07 64.9 4.6 36 45-80 40-76 (502)
230 2q7v_A Thioredoxin reductase; 95.8 0.036 1.2E-06 54.7 10.3 52 225-287 201-253 (325)
231 2hqm_A GR, grase, glutathione 95.8 0.012 4E-07 62.0 7.0 33 48-80 186-219 (479)
232 3lad_A Dihydrolipoamide dehydr 95.7 0.042 1.4E-06 57.6 10.8 33 48-80 181-214 (476)
233 3s5w_A L-ornithine 5-monooxyge 95.7 0.042 1.4E-06 57.3 10.7 35 47-81 227-264 (463)
234 4eqs_A Coenzyme A disulfide re 95.7 0.0058 2E-07 63.6 3.8 33 49-81 2-37 (437)
235 2cdu_A NADPH oxidase; flavoenz 95.6 0.047 1.6E-06 56.8 10.5 33 48-80 150-183 (452)
236 2a8x_A Dihydrolipoyl dehydroge 95.6 0.026 8.8E-07 59.1 8.5 33 48-80 172-205 (464)
237 1zmd_A Dihydrolipoyl dehydroge 95.6 0.035 1.2E-06 58.2 9.4 33 48-80 179-212 (474)
238 3cgb_A Pyridine nucleotide-dis 95.6 0.015 5.1E-07 61.2 6.6 34 47-80 186-220 (480)
239 3vrd_B FCCB subunit, flavocyto 95.5 0.0058 2E-07 62.6 3.1 33 49-81 4-39 (401)
240 1onf_A GR, grase, glutathione 95.5 0.04 1.4E-06 58.3 9.7 33 48-80 177-210 (500)
241 2gqw_A Ferredoxin reductase; f 95.5 0.042 1.4E-06 56.4 9.5 34 47-80 145-179 (408)
242 3ntd_A FAD-dependent pyridine 95.5 0.051 1.7E-06 58.3 10.5 32 49-80 153-185 (565)
243 1xdi_A RV3303C-LPDA; reductase 95.4 0.043 1.5E-06 58.0 9.6 33 48-80 183-216 (499)
244 1ojt_A Surface protein; redox- 95.4 0.036 1.2E-06 58.3 8.8 33 48-80 186-219 (482)
245 1dxl_A Dihydrolipoamide dehydr 95.3 0.042 1.4E-06 57.5 9.0 33 48-80 178-211 (470)
246 1vdc_A NTR, NADPH dependent th 95.3 0.12 4E-06 51.1 11.7 56 224-287 207-263 (333)
247 3ics_A Coenzyme A-disulfide re 95.2 0.046 1.6E-06 59.0 9.1 33 48-80 188-221 (588)
248 3dgh_A TRXR-1, thioredoxin red 95.2 0.074 2.5E-06 55.8 10.4 55 224-288 239-294 (483)
249 3oc4_A Oxidoreductase, pyridin 95.2 0.066 2.2E-06 55.7 9.8 33 48-80 148-181 (452)
250 3dgz_A Thioredoxin reductase 2 95.1 0.085 2.9E-06 55.5 10.6 30 49-78 187-217 (488)
251 3dk9_A Grase, GR, glutathione 95.1 0.12 4E-06 54.2 11.6 33 48-80 188-221 (478)
252 3o0h_A Glutathione reductase; 95.1 0.041 1.4E-06 57.8 8.1 33 48-80 192-225 (484)
253 3lzw_A Ferredoxin--NADP reduct 95.0 0.054 1.9E-06 53.3 8.3 32 48-79 155-187 (332)
254 4dna_A Probable glutathione re 94.7 0.038 1.3E-06 57.7 6.5 33 48-80 171-204 (463)
255 4b1b_A TRXR, thioredoxin reduc 94.1 0.19 6.6E-06 53.4 10.4 31 48-78 224-255 (542)
256 1fec_A Trypanothione reductase 94.0 0.14 4.7E-06 53.9 9.1 50 223-286 242-291 (490)
257 1m6i_A Programmed cell death p 94.0 0.13 4.6E-06 54.1 8.8 32 48-79 181-217 (493)
258 2wpf_A Trypanothione reductase 93.8 0.16 5.6E-06 53.4 9.1 50 223-286 246-295 (495)
259 3qfa_A Thioredoxin reductase 1 93.7 0.36 1.2E-05 51.0 11.6 30 49-78 212-242 (519)
260 2gag_A Heterotetrameric sarcos 93.1 0.24 8.2E-06 56.7 9.5 58 225-292 329-392 (965)
261 1gte_A Dihydropyrimidine dehyd 92.8 0.27 9.4E-06 56.6 9.5 31 49-79 334-366 (1025)
262 4g6h_A Rotenone-insensitive NA 92.6 0.29 1E-05 51.5 8.8 32 49-80 219-265 (502)
263 3k30_A Histamine dehydrogenase 92.5 0.18 6.3E-06 55.4 7.3 33 48-80 524-559 (690)
264 4gcm_A TRXR, thioredoxin reduc 92.0 0.1 3.4E-06 51.1 4.0 33 49-81 147-180 (312)
265 1nhp_A NADH peroxidase; oxidor 91.9 0.083 2.9E-06 54.8 3.4 36 46-81 148-184 (447)
266 3klj_A NAD(FAD)-dependent dehy 91.1 0.1 3.5E-06 53.0 3.1 34 48-81 147-181 (385)
267 3fwz_A Inner membrane protein 91.0 0.16 5.5E-06 43.3 3.7 32 48-79 8-40 (140)
268 2g1u_A Hypothetical protein TM 90.9 0.12 4.1E-06 44.9 2.9 33 47-79 19-52 (155)
269 3llv_A Exopolyphosphatase-rela 90.9 0.11 3.9E-06 44.1 2.7 31 49-79 8-39 (141)
270 1lss_A TRK system potassium up 90.6 0.13 4.6E-06 43.3 2.9 31 48-78 5-36 (140)
271 4a5l_A Thioredoxin reductase; 90.4 0.18 6.1E-06 49.2 4.0 34 48-81 153-187 (314)
272 1id1_A Putative potassium chan 89.7 0.2 6.8E-06 43.3 3.3 31 48-78 4-35 (153)
273 1xhc_A NADH oxidase /nitrite r 89.4 0.17 5.7E-06 51.0 2.9 34 48-81 144-178 (367)
274 3ic5_A Putative saccharopine d 87.9 0.25 8.5E-06 40.1 2.5 31 49-79 7-39 (118)
275 2hmt_A YUAA protein; RCK, KTN, 87.0 0.26 8.8E-06 41.7 2.1 31 49-79 8-39 (144)
276 2bcg_G Secretory pathway GDP d 86.8 0.53 1.8E-05 48.8 4.9 62 206-282 236-299 (453)
277 2bc0_A NADH oxidase; flavoprot 86.6 0.35 1.2E-05 50.8 3.3 34 48-81 195-229 (490)
278 1ps9_A 2,4-dienoyl-COA reducta 86.6 1.6 5.6E-05 47.6 8.8 52 221-288 582-633 (671)
279 2gv8_A Monooxygenase; FMO, FAD 86.5 0.4 1.4E-05 49.5 3.7 33 48-80 213-247 (447)
280 3gwf_A Cyclohexanone monooxyge 86.2 0.48 1.6E-05 50.4 4.2 33 48-80 179-212 (540)
281 3uox_A Otemo; baeyer-villiger 86.0 0.46 1.6E-05 50.6 3.9 34 48-81 186-220 (545)
282 3d1c_A Flavin-containing putat 86.0 0.34 1.2E-05 48.4 2.8 33 49-81 168-201 (369)
283 4eqs_A Coenzyme A disulfide re 85.6 0.44 1.5E-05 49.2 3.4 34 48-81 148-182 (437)
284 2xve_A Flavin-containing monoo 85.2 0.47 1.6E-05 49.4 3.4 33 48-80 198-231 (464)
285 3kd9_A Coenzyme A disulfide re 84.9 0.48 1.6E-05 49.0 3.3 34 48-81 149-183 (449)
286 1q1r_A Putidaredoxin reductase 84.9 0.46 1.6E-05 48.9 3.2 34 48-81 150-184 (431)
287 1d5t_A Guanine nucleotide diss 84.6 0.47 1.6E-05 48.9 3.1 62 206-282 228-289 (433)
288 3ef6_A Toluene 1,2-dioxygenase 84.5 0.49 1.7E-05 48.3 3.2 35 47-81 143-178 (410)
289 2a87_A TRXR, TR, thioredoxin r 84.5 0.66 2.3E-05 45.7 4.0 33 48-80 156-189 (335)
290 1vg0_A RAB proteins geranylger 84.2 1.3 4.4E-05 47.8 6.3 64 204-280 370-434 (650)
291 3l4b_C TRKA K+ channel protien 84.0 0.4 1.4E-05 44.1 2.0 31 49-79 2-33 (218)
292 2a9f_A Putative malic enzyme ( 83.9 1.1 3.7E-05 45.0 5.1 34 47-80 188-223 (398)
293 4ap3_A Steroid monooxygenase; 83.8 0.54 1.8E-05 50.1 3.2 34 48-81 192-226 (549)
294 3hn2_A 2-dehydropantoate 2-red 83.5 0.62 2.1E-05 45.6 3.3 31 49-79 4-35 (312)
295 3i83_A 2-dehydropantoate 2-red 83.5 0.57 2E-05 46.0 3.1 31 49-79 4-35 (320)
296 3oj0_A Glutr, glutamyl-tRNA re 83.3 0.75 2.6E-05 39.1 3.4 32 48-79 22-54 (144)
297 1f0y_A HCDH, L-3-hydroxyacyl-C 83.1 0.67 2.3E-05 45.1 3.3 31 49-79 17-48 (302)
298 1zk7_A HGII, reductase, mercur 83.0 0.62 2.1E-05 48.5 3.2 34 48-81 177-211 (467)
299 3itj_A Thioredoxin reductase 1 82.6 0.87 3E-05 44.6 4.0 34 48-81 174-208 (338)
300 3ado_A Lambda-crystallin; L-gu 82.3 0.59 2E-05 45.8 2.5 31 49-79 8-39 (319)
301 4g65_A TRK system potassium up 81.8 0.76 2.6E-05 47.7 3.3 31 49-79 5-36 (461)
302 3lxd_A FAD-dependent pyridine 81.7 0.78 2.7E-05 46.8 3.3 34 48-81 153-187 (415)
303 3fg2_P Putative rubredoxin red 81.4 0.77 2.6E-05 46.7 3.2 34 48-81 143-177 (404)
304 1kyq_A Met8P, siroheme biosynt 81.3 0.74 2.5E-05 44.0 2.8 32 47-78 13-45 (274)
305 3l8k_A Dihydrolipoyl dehydroge 80.8 0.83 2.8E-05 47.5 3.2 34 48-81 173-207 (466)
306 2x8g_A Thioredoxin glutathione 80.8 0.74 2.5E-05 49.6 2.9 30 49-78 288-318 (598)
307 3fbs_A Oxidoreductase; structu 80.2 1.3 4.3E-05 42.4 4.1 33 47-80 141-174 (297)
308 1jw9_B Molybdopterin biosynthe 80.1 0.89 3E-05 42.9 2.9 35 47-81 31-67 (249)
309 4e12_A Diketoreductase; oxidor 80.0 1 3.4E-05 43.4 3.3 31 49-79 6-37 (283)
310 3dfz_A SIRC, precorrin-2 dehyd 80.0 1 3.5E-05 41.6 3.2 32 47-78 31-63 (223)
311 2raf_A Putative dinucleotide-b 79.7 1 3.6E-05 41.1 3.1 33 48-80 20-53 (209)
312 3g17_A Similar to 2-dehydropan 79.7 0.7 2.4E-05 44.8 2.0 31 49-79 4-35 (294)
313 3ghy_A Ketopantoate reductase 79.4 0.86 2.9E-05 45.1 2.6 30 49-78 5-35 (335)
314 1ks9_A KPA reductase;, 2-dehyd 79.4 1 3.5E-05 43.2 3.1 31 49-79 2-33 (291)
315 3rui_A Ubiquitin-like modifier 79.4 1.4 4.6E-05 43.5 4.0 37 47-83 34-72 (340)
316 1hyu_A AHPF, alkyl hydroperoxi 79.3 0.93 3.2E-05 47.9 3.0 34 48-81 356-390 (521)
317 3c85_A Putative glutathione-re 79.2 0.98 3.4E-05 40.1 2.7 32 48-79 40-73 (183)
318 1vl6_A Malate oxidoreductase; 77.9 2 6.9E-05 42.9 4.7 34 47-80 192-227 (388)
319 3f8d_A Thioredoxin reductase ( 77.7 1.2 4.3E-05 43.0 3.2 36 47-82 154-190 (323)
320 1bg6_A N-(1-D-carboxylethyl)-L 77.6 1.1 3.8E-05 44.5 2.9 31 48-78 5-36 (359)
321 2y0c_A BCEC, UDP-glucose dehyd 77.4 1.1 3.7E-05 46.8 2.8 33 47-79 8-41 (478)
322 3l9w_A Glutathione-regulated p 77.4 1.1 3.8E-05 45.7 2.8 32 48-79 5-37 (413)
323 1lld_A L-lactate dehydrogenase 77.2 1.2 4.1E-05 43.6 2.9 32 48-79 8-42 (319)
324 1pzg_A LDH, lactate dehydrogen 77.1 1.5 5.2E-05 43.2 3.6 32 48-79 10-43 (331)
325 2vvm_A Monoamine oxidase N; FA 77.1 2.4 8.3E-05 44.1 5.4 59 208-281 251-310 (495)
326 2ewd_A Lactate dehydrogenase,; 76.9 1.5 5.3E-05 42.8 3.6 32 48-79 5-38 (317)
327 2ew2_A 2-dehydropantoate 2-red 76.8 1.2 4.1E-05 43.3 2.8 30 49-78 5-35 (316)
328 3r9u_A Thioredoxin reductase; 76.0 1.7 5.7E-05 41.9 3.6 34 48-81 148-182 (315)
329 1mv8_A GMD, GDP-mannose 6-dehy 75.3 1.5 5.3E-05 45.0 3.2 31 49-79 2-33 (436)
330 1jay_A Coenzyme F420H2:NADP+ o 75.3 1.9 6.4E-05 39.2 3.5 29 50-78 3-33 (212)
331 4a9w_A Monooxygenase; baeyer-v 75.3 1.9 6.5E-05 42.3 3.8 31 48-79 164-195 (357)
332 2aef_A Calcium-gated potassium 75.1 1.3 4.4E-05 41.1 2.4 32 47-79 9-41 (234)
333 4dio_A NAD(P) transhydrogenase 74.9 1.5 5.3E-05 44.2 3.0 34 47-80 190-224 (405)
334 3hwr_A 2-dehydropantoate 2-red 74.9 1.5 5E-05 43.0 2.8 30 48-78 20-50 (318)
335 3qha_A Putative oxidoreductase 74.8 2.4 8.3E-05 40.9 4.4 34 47-80 15-49 (296)
336 3k96_A Glycerol-3-phosphate de 74.8 1.9 6.6E-05 42.9 3.7 32 48-79 30-62 (356)
337 1txg_A Glycerol-3-phosphate de 74.7 1.5 5.1E-05 43.1 2.9 28 50-77 3-31 (335)
338 1nyt_A Shikimate 5-dehydrogena 74.5 1.5 5.2E-05 41.8 2.8 31 48-78 120-151 (271)
339 2dpo_A L-gulonate 3-dehydrogen 74.4 1.4 4.8E-05 43.2 2.6 31 49-79 8-39 (319)
340 1zcj_A Peroxisomal bifunctiona 74.0 1.8 6.1E-05 44.9 3.4 31 49-79 39-70 (463)
341 3vh1_A Ubiquitin-like modifier 73.9 2.6 9E-05 44.7 4.6 36 47-82 327-364 (598)
342 3p2y_A Alanine dehydrogenase/p 73.9 1.6 5.5E-05 43.7 2.8 33 47-79 184-217 (381)
343 3gg2_A Sugar dehydrogenase, UD 73.5 1.6 5.4E-05 45.1 2.8 31 49-79 4-35 (450)
344 3lk7_A UDP-N-acetylmuramoylala 73.5 2 7E-05 44.3 3.6 32 48-79 10-42 (451)
345 1cjc_A Protein (adrenodoxin re 73.0 2.1 7.1E-05 44.4 3.6 33 48-80 146-200 (460)
346 2ywl_A Thioredoxin reductase r 73.0 2.5 8.5E-05 37.1 3.6 55 219-292 63-117 (180)
347 1zud_1 Adenylyltransferase THI 72.7 2.3 8E-05 40.0 3.6 35 47-81 28-64 (251)
348 3vtf_A UDP-glucose 6-dehydroge 72.2 1.8 6.1E-05 44.4 2.7 33 47-79 21-54 (444)
349 2vdc_G Glutamate synthase [NAD 72.2 1.8 6.1E-05 44.8 2.8 33 48-80 265-299 (456)
350 3h8v_A Ubiquitin-like modifier 71.9 2.1 7.3E-05 41.2 3.1 36 47-82 36-73 (292)
351 1z82_A Glycerol-3-phosphate de 71.9 1.9 6.6E-05 42.4 2.9 32 47-78 14-46 (335)
352 3ego_A Probable 2-dehydropanto 71.7 2.4 8.2E-05 41.2 3.5 31 49-79 4-34 (307)
353 3ond_A Adenosylhomocysteinase; 71.7 1.9 6.5E-05 44.6 2.8 31 48-78 266-297 (488)
354 2eez_A Alanine dehydrogenase; 71.6 2 6.8E-05 43.1 2.9 32 48-79 167-199 (369)
355 3k6j_A Protein F01G10.3, confi 71.2 2.7 9.3E-05 43.3 3.8 32 48-79 55-87 (460)
356 2v6b_A L-LDH, L-lactate dehydr 71.0 2 7E-05 41.7 2.8 31 49-79 2-35 (304)
357 1evy_A Glycerol-3-phosphate de 71.0 1.9 6.5E-05 43.1 2.6 31 49-79 17-48 (366)
358 1pjc_A Protein (L-alanine dehy 71.0 2.1 7.1E-05 42.8 2.9 32 48-79 168-200 (361)
359 2vns_A Metalloreductase steap3 71.0 2.1 7.1E-05 39.2 2.7 32 48-79 29-61 (215)
360 3nks_A Protoporphyrinogen oxid 70.7 1.7 5.7E-05 45.0 2.2 65 208-287 230-294 (477)
361 1x13_A NAD(P) transhydrogenase 70.6 2.1 7E-05 43.5 2.8 33 47-79 172-205 (401)
362 1nvt_A Shikimate 5'-dehydrogen 70.5 2.6 8.9E-05 40.5 3.4 29 49-78 130-159 (287)
363 3phh_A Shikimate dehydrogenase 70.2 2.2 7.7E-05 40.5 2.8 33 47-79 118-151 (269)
364 1o94_A Tmadh, trimethylamine d 70.2 2.2 7.4E-05 47.1 3.0 32 48-79 529-563 (729)
365 3tl2_A Malate dehydrogenase; c 69.8 2.9 9.7E-05 40.9 3.5 32 47-78 8-41 (315)
366 2egg_A AROE, shikimate 5-dehyd 69.8 2.7 9.3E-05 40.6 3.4 31 48-78 142-174 (297)
367 4dll_A 2-hydroxy-3-oxopropiona 69.6 3 0.0001 40.8 3.7 32 48-79 32-64 (320)
368 4gsl_A Ubiquitin-like modifier 69.5 2.5 8.6E-05 44.9 3.2 36 47-82 326-363 (615)
369 3dtt_A NADP oxidoreductase; st 69.5 2.5 8.4E-05 39.6 2.9 33 47-79 19-52 (245)
370 3ius_A Uncharacterized conserv 69.4 3 0.0001 39.6 3.6 31 49-79 7-38 (286)
371 2pv7_A T-protein [includes: ch 69.4 2.8 9.6E-05 40.5 3.4 30 49-78 23-54 (298)
372 2hjr_A Malate dehydrogenase; m 69.2 2.3 8E-05 41.8 2.8 32 48-79 15-48 (328)
373 1p77_A Shikimate 5-dehydrogena 69.2 1.9 6.5E-05 41.1 2.1 32 48-79 120-152 (272)
374 3pdu_A 3-hydroxyisobutyrate de 68.9 2.7 9.1E-05 40.4 3.1 31 49-79 3-34 (287)
375 1t2d_A LDH-P, L-lactate dehydr 68.9 2.8 9.4E-05 41.1 3.2 32 48-79 5-38 (322)
376 2x5o_A UDP-N-acetylmuramoylala 68.8 2.2 7.4E-05 43.9 2.5 32 49-80 7-39 (439)
377 2vhw_A Alanine dehydrogenase; 68.7 2.5 8.5E-05 42.5 2.9 32 47-78 168-200 (377)
378 4a7p_A UDP-glucose dehydrogena 68.5 2.8 9.6E-05 43.1 3.3 34 47-80 8-42 (446)
379 1l7d_A Nicotinamide nucleotide 68.2 2.8 9.5E-05 42.3 3.1 33 47-79 172-205 (384)
380 3ojo_A CAP5O; rossmann fold, c 68.0 2.5 8.6E-05 43.2 2.8 32 48-79 12-44 (431)
381 2h78_A Hibadh, 3-hydroxyisobut 67.9 3 0.0001 40.3 3.2 31 49-79 5-36 (302)
382 3pef_A 6-phosphogluconate dehy 67.8 2.7 9.1E-05 40.4 2.8 31 49-79 3-34 (287)
383 3cky_A 2-hydroxymethyl glutara 67.7 3.2 0.00011 39.9 3.4 31 48-78 5-36 (301)
384 3gpi_A NAD-dependent epimerase 67.7 2.9 9.8E-05 39.9 3.0 32 49-80 5-37 (286)
385 1lu9_A Methylene tetrahydromet 67.3 2.9 9.8E-05 40.2 2.9 31 48-78 120-152 (287)
386 3iwa_A FAD-dependent pyridine 67.3 2.9 9.9E-05 43.3 3.2 34 48-81 160-195 (472)
387 3doj_A AT3G25530, dehydrogenas 67.3 3.3 0.00011 40.2 3.4 32 48-79 22-54 (310)
388 1a5z_A L-lactate dehydrogenase 67.2 2.7 9.3E-05 41.1 2.8 31 49-79 2-35 (319)
389 3g0o_A 3-hydroxyisobutyrate de 67.2 2.7 9.3E-05 40.7 2.8 32 48-79 8-40 (303)
390 3h5n_A MCCB protein; ubiquitin 67.0 3 0.0001 41.5 3.0 34 47-80 118-153 (353)
391 1dlj_A UDP-glucose dehydrogena 67.0 3.4 0.00012 41.9 3.5 31 49-79 2-32 (402)
392 2uyy_A N-PAC protein; long-cha 66.6 3.6 0.00012 40.0 3.6 32 48-79 31-63 (316)
393 3ew7_A LMO0794 protein; Q8Y8U8 66.6 3.4 0.00012 37.4 3.2 30 50-79 3-34 (221)
394 4ezb_A Uncharacterized conserv 66.6 3.5 0.00012 40.2 3.4 31 49-79 26-58 (317)
395 1leh_A Leucine dehydrogenase; 66.6 2.9 9.7E-05 41.7 2.8 31 48-78 174-205 (364)
396 3dqp_A Oxidoreductase YLBE; al 66.5 4 0.00014 37.0 3.7 31 50-80 3-35 (219)
397 3tnl_A Shikimate dehydrogenase 66.5 3.1 0.0001 40.6 2.9 31 48-78 155-187 (315)
398 3nv9_A Malic enzyme; rossmann 66.4 3.2 0.00011 42.2 3.1 35 47-81 219-257 (487)
399 1w4x_A Phenylacetone monooxyge 66.4 3.1 0.00011 44.0 3.2 34 48-81 187-221 (542)
400 3d4o_A Dipicolinate synthase s 66.3 3.1 0.0001 40.1 2.9 32 48-79 156-188 (293)
401 4e21_A 6-phosphogluconate dehy 66.3 3 0.0001 41.5 2.9 36 44-79 19-55 (358)
402 3fbt_A Chorismate mutase and s 66.2 3.7 0.00013 39.3 3.4 33 47-79 122-156 (282)
403 3mog_A Probable 3-hydroxybutyr 66.1 2.7 9.1E-05 43.8 2.6 31 49-79 7-38 (483)
404 3k7m_X 6-hydroxy-L-nicotine ox 65.9 5.1 0.00017 40.6 4.7 45 221-281 213-257 (431)
405 3pid_A UDP-glucose 6-dehydroge 65.8 3.6 0.00012 42.0 3.4 32 48-79 37-68 (432)
406 3o38_A Short chain dehydrogena 65.6 2.9 9.9E-05 39.4 2.5 31 49-79 24-57 (266)
407 3jyo_A Quinate/shikimate dehyd 65.5 3.1 0.00011 39.9 2.8 33 47-79 127-161 (283)
408 3h2s_A Putative NADH-flavin re 65.4 3.5 0.00012 37.4 3.0 30 50-79 3-34 (224)
409 2rir_A Dipicolinate synthase, 65.3 3.3 0.00011 40.1 2.9 32 48-79 158-190 (300)
410 1hdo_A Biliverdin IX beta redu 65.3 3.5 0.00012 36.7 3.0 31 49-79 5-37 (206)
411 3e8x_A Putative NAD-dependent 65.2 3.4 0.00012 38.0 3.0 32 48-79 22-55 (236)
412 1hyh_A L-hicdh, L-2-hydroxyiso 65.2 3.2 0.00011 40.4 2.8 31 49-79 3-36 (309)
413 1yqg_A Pyrroline-5-carboxylate 65.1 3.3 0.00011 39.0 2.8 29 50-78 3-33 (263)
414 2f1k_A Prephenate dehydrogenas 64.8 3.3 0.00011 39.4 2.8 29 50-78 3-32 (279)
415 3don_A Shikimate dehydrogenase 64.8 3.1 0.00011 39.7 2.6 32 48-79 118-151 (277)
416 2hk9_A Shikimate dehydrogenase 64.5 3.4 0.00011 39.4 2.8 32 48-79 130-162 (275)
417 1vpd_A Tartronate semialdehyde 64.4 3.8 0.00013 39.3 3.2 31 49-79 7-38 (299)
418 3o8q_A Shikimate 5-dehydrogena 64.2 4.4 0.00015 38.8 3.5 33 47-79 126-160 (281)
419 3dfu_A Uncharacterized protein 64.2 2.4 8.2E-05 39.3 1.6 29 49-77 8-37 (232)
420 1yj8_A Glycerol-3-phosphate de 64.0 2.9 9.8E-05 41.9 2.3 32 49-80 23-62 (375)
421 4gx0_A TRKA domain protein; me 63.9 3.6 0.00012 43.8 3.2 34 48-81 349-383 (565)
422 3c7a_A Octopine dehydrogenase; 63.5 3.8 0.00013 41.5 3.1 28 49-76 4-33 (404)
423 2gf2_A Hibadh, 3-hydroxyisobut 63.5 4.1 0.00014 39.0 3.3 31 49-79 2-33 (296)
424 2izz_A Pyrroline-5-carboxylate 63.3 3.6 0.00012 40.3 2.8 33 47-79 22-59 (322)
425 1x0v_A GPD-C, GPDH-C, glycerol 63.3 2.7 9.3E-05 41.6 1.9 32 49-80 10-49 (354)
426 1guz_A Malate dehydrogenase; o 63.1 4.1 0.00014 39.6 3.2 31 49-79 2-35 (310)
427 2e4g_A Tryptophan halogenase; 63.0 4.6 0.00016 42.8 3.7 50 218-281 200-250 (550)
428 2pd4_A Enoyl-[acyl-carrier-pro 63.0 5.6 0.00019 37.6 4.1 30 50-79 9-42 (275)
429 3u62_A Shikimate dehydrogenase 62.8 3.8 0.00013 38.6 2.7 31 49-79 110-142 (253)
430 3qsg_A NAD-binding phosphogluc 62.3 3.8 0.00013 39.9 2.7 31 48-78 25-57 (312)
431 2zyd_A 6-phosphogluconate dehy 62.2 4.5 0.00015 42.0 3.4 33 47-79 15-48 (480)
432 2wtb_A MFP2, fatty acid multif 62.1 4 0.00014 44.8 3.1 31 49-79 314-345 (725)
433 2g5c_A Prephenate dehydrogenas 61.9 4 0.00014 38.9 2.8 29 50-78 4-35 (281)
434 1b37_A Protein (polyamine oxid 61.9 8.2 0.00028 39.8 5.4 41 226-281 228-268 (472)
435 3ggo_A Prephenate dehydrogenas 61.9 4 0.00014 39.8 2.8 32 48-79 34-68 (314)
436 3pwz_A Shikimate dehydrogenase 61.7 4.1 0.00014 38.8 2.8 32 47-78 120-153 (272)
437 3t4e_A Quinate/shikimate dehyd 61.7 4.2 0.00014 39.5 2.9 31 48-78 149-181 (312)
438 2dkn_A 3-alpha-hydroxysteroid 61.6 4.8 0.00016 37.3 3.3 30 50-79 4-35 (255)
439 1ff9_A Saccharopine reductase; 61.5 5.6 0.00019 40.9 4.0 30 49-78 5-35 (450)
440 3c24_A Putative oxidoreductase 61.5 4.1 0.00014 39.0 2.8 30 49-78 13-44 (286)
441 3lov_A Protoporphyrinogen oxid 61.4 5.4 0.00018 41.1 3.9 45 227-287 249-293 (475)
442 3qvo_A NMRA family protein; st 61.4 5 0.00017 36.9 3.3 32 49-80 25-59 (236)
443 1c1d_A L-phenylalanine dehydro 61.2 4.1 0.00014 40.4 2.7 32 47-78 175-207 (355)
444 4ffl_A PYLC; amino acid, biosy 61.2 4.7 0.00016 40.0 3.3 31 50-80 4-35 (363)
445 4huj_A Uncharacterized protein 61.1 2.3 7.7E-05 39.1 0.8 32 48-79 24-57 (220)
446 1ur5_A Malate dehydrogenase; o 61.1 4.2 0.00014 39.6 2.8 31 49-79 4-36 (309)
447 3r6d_A NAD-dependent epimerase 61.0 4.6 0.00016 36.6 3.0 30 50-79 8-40 (221)
448 3pqe_A L-LDH, L-lactate dehydr 60.8 5 0.00017 39.3 3.3 31 48-78 6-39 (326)
449 3g79_A NDP-N-acetyl-D-galactos 60.6 5.3 0.00018 41.4 3.6 32 49-80 20-54 (478)
450 1edz_A 5,10-methylenetetrahydr 60.0 6.3 0.00022 38.3 3.8 32 47-78 177-210 (320)
451 3eag_A UDP-N-acetylmuramate:L- 59.9 5.7 0.00019 38.9 3.5 32 49-80 6-39 (326)
452 4g65_A TRK system potassium up 59.9 5.6 0.00019 41.1 3.6 32 48-79 236-267 (461)
453 1y8q_A Ubiquitin-like 1 activa 59.7 6.1 0.00021 39.1 3.7 35 47-81 36-72 (346)
454 3gvp_A Adenosylhomocysteinase 59.6 4.6 0.00016 41.0 2.8 33 47-79 220-253 (435)
455 1pjq_A CYSG, siroheme synthase 59.5 4.5 0.00015 41.8 2.8 31 48-78 13-44 (457)
456 1tt5_B Ubiquitin-activating en 59.4 5.3 0.00018 40.8 3.3 34 47-80 40-75 (434)
457 2o3j_A UDP-glucose 6-dehydroge 59.3 6.5 0.00022 40.8 4.0 31 49-79 11-44 (481)
458 3l6d_A Putative oxidoreductase 59.2 5.8 0.0002 38.4 3.4 32 48-79 10-42 (306)
459 2h7i_A Enoyl-[acyl-carrier-pro 58.4 5.3 0.00018 37.7 2.9 30 50-79 10-43 (269)
460 1npy_A Hypothetical shikimate 58.4 5.6 0.00019 37.8 3.0 31 48-78 120-152 (271)
461 1pgj_A 6PGDH, 6-PGDH, 6-phosph 58.4 4.6 0.00016 42.0 2.6 30 49-78 3-33 (478)
462 2o2s_A Enoyl-acyl carrier redu 58.3 6.9 0.00024 37.9 3.8 29 50-78 12-44 (315)
463 3ce6_A Adenosylhomocysteinase; 58.2 4.8 0.00017 41.8 2.8 32 48-79 275-307 (494)
464 2d5c_A AROE, shikimate 5-dehyd 58.0 4.8 0.00017 38.0 2.6 31 49-79 118-149 (263)
465 1lnq_A MTHK channels, potassiu 57.8 4.9 0.00017 39.5 2.7 32 48-80 116-148 (336)
466 2wyu_A Enoyl-[acyl carrier pro 57.6 6.2 0.00021 37.0 3.3 30 50-79 11-44 (261)
467 1lqt_A FPRA; NADP+ derivative, 57.6 6.3 0.00022 40.6 3.6 50 225-285 265-328 (456)
468 1i36_A Conserved hypothetical 57.5 4.4 0.00015 38.1 2.2 28 50-77 3-31 (264)
469 1y6j_A L-lactate dehydrogenase 57.4 5.7 0.00019 38.8 3.0 33 47-79 7-42 (318)
470 1oju_A MDH, malate dehydrogena 57.4 5.3 0.00018 38.5 2.7 30 50-79 3-35 (294)
471 2yjz_A Metalloreductase steap4 62.0 2.2 7.5E-05 38.6 0.0 31 49-79 21-52 (201)
472 1zej_A HBD-9, 3-hydroxyacyl-CO 57.2 6.6 0.00023 37.8 3.4 32 48-79 13-44 (293)
473 2dvm_A Malic enzyme, 439AA lon 57.2 4.9 0.00017 41.0 2.6 29 48-76 187-219 (439)
474 2rcy_A Pyrroline carboxylate r 57.2 6.1 0.00021 37.0 3.2 31 49-79 6-41 (262)
475 3k31_A Enoyl-(acyl-carrier-pro 57.1 6.3 0.00022 37.8 3.3 30 49-78 32-65 (296)
476 2pgd_A 6-phosphogluconate dehy 57.0 5.3 0.00018 41.5 2.9 31 49-79 4-35 (482)
477 2aqj_A Tryptophan halogenase, 57.0 7.2 0.00025 41.1 4.0 51 218-282 171-221 (538)
478 2o7s_A DHQ-SDH PR, bifunctiona 56.9 4.3 0.00015 42.7 2.2 30 49-78 366-396 (523)
479 3d1l_A Putative NADP oxidoredu 56.7 5.2 0.00018 37.7 2.6 30 49-78 12-43 (266)
480 2dbq_A Glyoxylate reductase; D 56.6 6.2 0.00021 38.8 3.1 32 48-79 151-183 (334)
481 1gpj_A Glutamyl-tRNA reductase 56.6 5.5 0.00019 40.3 2.9 32 47-78 167-200 (404)
482 3zwc_A Peroxisomal bifunctiona 56.4 6.2 0.00021 43.3 3.4 32 48-79 317-349 (742)
483 3vps_A TUNA, NAD-dependent epi 56.4 5.6 0.00019 38.3 2.8 32 49-80 9-42 (321)
484 2p4q_A 6-phosphogluconate dehy 56.4 5.9 0.0002 41.4 3.1 33 47-79 10-43 (497)
485 3ktd_A Prephenate dehydrogenas 56.2 5.3 0.00018 39.4 2.6 31 49-79 10-41 (341)
486 2ahr_A Putative pyrroline carb 56.2 7.2 0.00025 36.5 3.5 30 49-78 5-35 (259)
487 2bka_A CC3, TAT-interacting pr 56.1 6.6 0.00023 36.1 3.1 32 49-80 20-55 (242)
488 3ldh_A Lactate dehydrogenase; 56.0 5.9 0.0002 38.8 2.8 31 48-78 22-55 (330)
489 1cyd_A Carbonyl reductase; sho 55.9 6.2 0.00021 36.3 2.9 30 49-78 9-40 (244)
490 2gcg_A Glyoxylate reductase/hy 55.8 6.8 0.00023 38.4 3.3 32 48-79 156-188 (330)
491 3oig_A Enoyl-[acyl-carrier-pro 55.8 7 0.00024 36.6 3.3 30 49-78 9-42 (266)
492 1y8q_B Anthracycline-, ubiquit 55.4 5.8 0.0002 42.5 2.9 35 47-81 17-53 (640)
493 2ydy_A Methionine adenosyltran 55.4 7 0.00024 37.6 3.3 30 50-79 5-36 (315)
494 1qsg_A Enoyl-[acyl-carrier-pro 55.3 6.3 0.00022 37.0 2.9 30 50-79 12-45 (265)
495 3n58_A Adenosylhomocysteinase; 55.2 6 0.0002 40.3 2.8 33 47-79 247-280 (464)
496 3d3w_A L-xylulose reductase; u 55.0 6.8 0.00023 36.1 3.0 30 49-78 9-40 (244)
497 4fs3_A Enoyl-[acyl-carrier-pro 55.0 7.6 0.00026 36.4 3.4 30 50-79 9-42 (256)
498 2i6t_A Ubiquitin-conjugating e 54.8 6.2 0.00021 38.2 2.8 32 48-79 15-49 (303)
499 2d0i_A Dehydrogenase; structur 54.8 8.4 0.00029 37.8 3.8 32 48-79 147-179 (333)
500 3d0o_A L-LDH 1, L-lactate dehy 54.8 7.1 0.00024 38.0 3.2 32 47-78 6-40 (317)
No 1
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=100.00 E-value=2.1e-75 Score=630.59 Aligned_cols=487 Identities=22% Similarity=0.314 Sum_probs=358.3
Q ss_pred cccEEEECCCcchhHHHHhhcC--CCeEEEEeccCCCCCCCCcccchhhhhcc----CCCCCCCCCCcccCCCcccccCc
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSPYGNPNITNLGSFGAAL----SDLSSTSPSQRFISEDGVINSRA 120 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~--G~~VlvLE~G~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~g 120 (575)
+|||||||+|.+||++|.+|+| +.+|||||+|+.....+....+..+...+ .+|.|.+.++..+.++.+.+++|
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~~~~~~~~~p~~~~~~~~~~~~~w~~~t~pq~~~~~r~~~~~rG 81 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSDENVLGAEAPLLAPGLVPNSIFDWNYTTTAQAGYNGRSIAYPRG 81 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCCTTCGGGTSGGGSGGGSSSSTTBCCCBCCCCGGGTTCCCBCCCB
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcccCCCceeCcchHHHhcCCCccccccccccCCCCCCceEeccCC
Confidence 6999999999999999999999 79999999998764444444554443333 37889999999999999999999
Q ss_pred ceecchhhcccceecCCChhhhh-------cCCCChhhhhhhhhhhhhhccc--------------C-----------CC
Q 008163 121 RVLGGGSCLNAGFYTRAAPYYVR-------EVGWDERLVNESYQWVEKVVAF--------------E-----------PP 168 (575)
Q Consensus 121 ~~lGG~s~~~~~~~~r~~~~~~~-------~~gw~~~~l~~~~~~~~~~~~~--------------~-----------~~ 168 (575)
++|||+|.+|++.|.|+.+.+++ ..+|+|+++.+||+++|+.... + +.
T Consensus 82 k~lGGsS~iN~m~~~Rg~~~d~d~W~~~~G~~gWs~~~~~pyf~k~E~~~~~~~~~~~~~~~~~~~hG~~Gp~~v~~~~~ 161 (566)
T 3fim_B 82 RMLGGSSSVHYMVMMRGSTEDFDRYAAVTGDEGWNWDNIQQFVRKNEMVVPPADNHNTSGEFIPAVHGTNGSVSISLPGF 161 (566)
T ss_dssp CBTTGGGGTSCCBCCCCCHHHHHHHHHHHTCTTSSHHHHHHHHHHHEEECCCTTCCCCTTTSCGGGSCBSSSEEEBSCSS
T ss_pred cEEcCcccccceEEecCCHHHHHHHHhcCCCCCcCHHHHHHHHHHHhccCCccccccccccCCccccCCCCCeeeecCCC
Confidence 99999999999999999986543 2579999999999998875421 0 11
Q ss_pred CchhHHHHHHHHHHc--CCCCCCCCCcCCCCcceeeeeEEC---CCCccccHHH-hhh-hcCCCCeEEEcCcEEEEEEEe
Q 008163 169 MRQWQSAVRDGLVEV--GVLPYNGFTYDHMYGTKIGGTIFD---QNGQRHTAAD-LLE-YANPSGLTLLLHASVHKVLFR 241 (575)
Q Consensus 169 ~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~---~~g~r~~~~~-~l~-~~~~~g~~v~~~~~V~~l~~~ 241 (575)
..++...+.+++++. |++...+.. .+...|..+++ .+|.|+++.. |+. ..++.|++|++++.|++|+++
T Consensus 162 ~~~~~~~~~~a~~~~~~G~~~~~d~n----~~~~~G~~~~~~~~~~g~R~sa~~ayL~p~~~r~NL~Vlt~a~V~rIl~~ 237 (566)
T 3fim_B 162 PTPLDDRVLATTQEQSEEFFFNPDMG----TGHPLGISWSIASVGNGQRSSSSTAYLRPAQSRPNLSVLINAQVTKLVNS 237 (566)
T ss_dssp CCTHHHHHHHHHHHTHHHHCBCSCGG----GSCCCEEEECCBSEETTEECCHHHHTHHHHTTCTTEEEESSCEEEEEECC
T ss_pred CCHHHHHHHHHHHHHhcCCCccCCCC----CCCcceEEeeeeecCCCEEcCHHHHHhhhhccCCCeEEECCCEEEEEEee
Confidence 234567788888888 876432221 12223332221 3788888776 665 667899999999999999998
Q ss_pred ---cCCCCCCeEEEEEEEeCCC-ceeEEeeecCCCcEEEEccCCcCcHHHHHhhc--------CCCceeeecCCccCCCC
Q 008163 242 ---IKGKARPVAHGVVFRDATG-AKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGM 309 (575)
Q Consensus 242 ---~~~~~~~~v~GV~~~~~~g-~~~~v~~~~~aa~~VVlAaG~~~sp~lLl~Sg--------~~gi~~~~~~p~vG~~l 309 (575)
++ .++++||++.+.+| +.++++ |+|+||||||+|+||+|||+|| ++||+++.++|+||+||
T Consensus 238 ~~~~g---~~rA~GVe~~~~~g~~~~~v~----A~kEVILsAGai~SPqlL~lSGIGp~~~L~~~gI~vv~dlPgVG~NL 310 (566)
T 3fim_B 238 GTTNG---LPAFRCVEYAEQEGAPTTTVC----AKKEVVLSAGSVGTPILLQLSGIGDENDLSSVGIDTIVNNPSVGRNL 310 (566)
T ss_dssp EEETT---EEECCEEEEESSTTSCCEEEE----EEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSB
T ss_pred cCCCC---CCEEEEEEEEECCCceEEEEE----eeeEEEEecCCcCChHHHHhcCCCChHHHhhcCCCceecCcchhhhh
Confidence 22 12899999996546 677777 6699999999999999999999 89999999999999999
Q ss_pred CCCCCceEEeeCCCcccch-h-hHh-hcccccchhhhhccCCcccCCCCCCCCCCCcccc-----cccccCCCCCCCCHH
Q 008163 310 SDNPMNAIFVPSPVPVEVS-L-IQV-VGITQFGSYIEAASGENFAGGSPSPRDYGMFSPK-----IGQLSKVPPKQRTPE 381 (575)
Q Consensus 310 ~dh~~~~~~~~~~~~~~~~-~-~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 381 (575)
+||+.+.+.+..+.+.... . ... ........|...++|+.-... ....+++... ...+.........++
T Consensus 311 qDH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~---~~~~~f~~~~~~~~~~~~~~~~~~~~~~pd 387 (566)
T 3fim_B 311 SDHLLLPAAFFVNSNQTFDNIFRDSSEFNVDLDQWTNTRTGPLTALI---ANHLAWLRLPSNSSIFQTFPDPAAGPNSAH 387 (566)
T ss_dssp BCCEEECCEEEESCSCSSGGGGTCHHHHHHHHHHHHHHSCSGGGCCS---CSEEEEECCCTTCGGGGTSCCCSSSTTSCS
T ss_pred hcCccceEEEEeCCCcccchhhcChHHHHHHHHHHHhcCCCCcccCh---hhheeeeccccchhhhhhhccccccCCCCC
Confidence 9999988777665432211 0 000 000112345555555421100 0000010000 000000000000111
Q ss_pred HHHHHHhhhc---cC-CCCCccceeEEeeecccCcceEEEccCCCCCCCCeeecCCCCCHHHHHHHHHHHHHHHHHHhcc
Q 008163 382 AIAEAIENMK---AL-DDPAFRGGFILEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESK 457 (575)
Q Consensus 382 ~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~p~s~g~v~l~~~d~~~~p~i~~~~~~~~~D~~~~~~~~~~~~~i~~~~ 457 (575)
. +.++.... .. ......++++...+.+|.|||+|+|+++||.+.|.|+++|+.+|.|++.+.++++.+++++++.
T Consensus 388 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~SrG~V~L~s~dp~~~P~i~~~yl~~~~D~~~~~~~~~~~~~i~~~~ 466 (566)
T 3fim_B 388 W-ETIFSNQWFHPAIPRPDTGSFMSVTNALISPVARGDIKLATSNPFDKPLINPQYLSTEFDIFTMIQAVKSNLRFLSGQ 466 (566)
T ss_dssp E-EEEEESSCCCTTSCCCSSCCEEEEEEEESSCSCCBEEECSSSCTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHTSG
T ss_pred E-EEEecccchhhcccCCCCCCEEEEEEeecCCccceEEEecCCCCCCCceeccccCCCccHHHHHHHHHHHHHHHHhCc
Confidence 0 00000000 00 0011134566778899999999999999999999999999999999999999999999999998
Q ss_pred cccccccccCcchhhhccccCCCCcCCC--CCCCCHHHHHHHHHhcccccccccccccCC------cccCCCCeEeccCC
Q 008163 458 SFSKFKYESMSVPILVNMTASAPVNLLP--RHSNASTSLEQFCRDTVMTIWHYHGGCQVG------KVVDHDYKVLGVDA 529 (575)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~~~~~~~~~~H~~Gt~~MG------~VVD~~~rv~g~~n 529 (575)
+++.+...+ ..| ...++|++|++|+|+...+.+|++|||||| +|||+++||||++|
T Consensus 467 ~~~~~~~~~----------------~~P~~~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~~~VVD~~lrV~Gv~~ 530 (566)
T 3fim_B 467 AWADFVIRP----------------FDPRLRDPTDDAAIESYIRDNANTIFHPVGTASMSPRGASWGVVDPDLKVKGVDG 530 (566)
T ss_dssp GGTTTEEEE----------------SSGGGSCTTCHHHHHHHHHHHCEECSCCBCTTCBCCTTCSSCSBCTTCBBTTCBS
T ss_pred ccCCccccc----------------cCCCcccccchHHHHHHHhhcccccccccCccccCCcccCCccCCCCCeEccCCC
Confidence 887766444 223 245789999999999999999999999998 79999999999999
Q ss_pred ceeeeccCCCCCCCCchHHHHHHHHHhhHHHHHHH
Q 008163 530 LRVIDGSTFYYSPGTNPQATVMMLGRYVNLTTSKY 564 (575)
Q Consensus 530 L~V~DaSv~P~~~~~NP~lTi~Ala~r~a~~i~~~ 564 (575)
|||||+||||+.+++||++|+||||||+||+|+++
T Consensus 531 LrVvDaSv~P~~~~~n~~~~~~~iaekaAd~I~~~ 565 (566)
T 3fim_B 531 LRIVDGSILPFAPNAHTQGPIYLVGKQGADLIKAD 565 (566)
T ss_dssp EEECSGGGCCSCCSSCTHHHHHHHHHHHHHHHHHT
T ss_pred cEEcccccCCCCCCcCcHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999864
No 2
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=100.00 E-value=1.1e-74 Score=625.91 Aligned_cols=493 Identities=41% Similarity=0.760 Sum_probs=370.4
Q ss_pred CccccccccccCCCCcccEEEECCCcchhHHHHhhcCCCeEEEEeccCCCCCCCCcccchhhhhccCCC-CCCCCCCccc
Q 008163 32 NYSFMHNATAAQPVSYYDYIIIGGGTAGCPLAATLSQNASVLLLERGGSPYGNPNITNLGSFGAALSDL-SSTSPSQRFI 110 (575)
Q Consensus 32 ~~~~~~~~~~~~~~~~~DvIIVGsG~aG~~~A~~La~G~~VlvLE~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 110 (575)
.++|+..+...++..+|||||||||.+|+++|.+|+||.+|||||+|+....++....+..+...+.+. .|.+.++...
T Consensus 11 ~~~~~~~~~~~~~~~~yD~IIVGsG~AG~v~A~rLseg~~VlvLEaG~~~~~~~~~~~~~~~~~~~~~~~~~~t~~q~~~ 90 (536)
T 1ju2_A 11 YLSFAYDATDLELEGSYDYVIVGGGTSGCPLAATLSEKYKVLVLERGSLPTAYPNVLTADGFVYNLQQEDDGKTPVERFV 90 (536)
T ss_dssp GGGGEEEGGGSCSEEEEEEEEECCSTTHHHHHHHHTTTSCEEEECSSBCGGGSGGGGBGGGHHHHHHSCCCSSSSEEEEE
T ss_pred cCccccCcccccccCcccEEEECccHHHHHHHHHHhcCCcEEEEecCCCcCCCcceecchhHhhhccCCCcCcCCCcccc
Confidence 456777766666667899999999999999999999999999999998754344444444444333221 2456666666
Q ss_pred CCCcccccCcceecchhhcccceecCCChhhhhcCC--CChhhhhhhhhhhhhhcccCCCCchhHHHHHHHHHHcCCCCC
Q 008163 111 SEDGVINSRARVLGGGSCLNAGFYTRAAPYYVREVG--WDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPY 188 (575)
Q Consensus 111 ~~~~~~~~~g~~lGG~s~~~~~~~~r~~~~~~~~~g--w~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 188 (575)
.+++..+++|+++||+|.+|++.+.|+.+.+++..| |+++++.+||+++|+.+...+...++...+.+++.+.|+.+.
T Consensus 91 ~~~~~~~~rg~~lGGsS~in~~~~~R~~~~d~~~~G~~W~~~~~~p~~~~~e~~~~~~~~~~~~~~~~~~a~~~~G~~~~ 170 (536)
T 1ju2_A 91 SEDGIDNVRGRVLGGTSIINAGVYARANTSIYSASGVDWDMDLVNQTYEWVEDTIVYKPNSQSWQSVTKTAFLEAGVHPN 170 (536)
T ss_dssp CTTSCEEEEECBTTGGGGTSCCEECBCCTTSSTTSSSCCCHHHHHHHHHHHHHHHCBCCCCCHHHHHHHHHHHHTTCCCE
T ss_pred CCCcceeecceeccccccccCeEEEeCCHHHHhhccCCCChHHHHHHHHhhhcccCCCCCCCcHHHHHHHHHHHcCCCCC
Confidence 777888899999999999999999999998877777 999999999999999877766667788889999999998765
Q ss_pred CCCCcCCCCcceeeeeEECCCCccccHHHhhhhcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEeee
Q 008163 189 NGFTYDHMYGTKIGGTIFDQNGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLK 268 (575)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~l~~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~ 268 (575)
++...+...++..+...++.+|.|+++..|++.+++.|++|+++++|++|+++++ +..+++||++.+.+|+.++++++
T Consensus 171 ~~~~~~~~~g~~~g~~~~~~~g~r~s~~~~~~~~~~~~~~v~~~~~v~~i~~~~~--~~~~~~GV~~~~~~g~~~~~~v~ 248 (536)
T 1ju2_A 171 HGFSLDHEEGTRITGSTFDNKGTRHAADELLNKGNSNNLRVGVHASVEKIIFSNA--PGLTATGVIYRDSNGTPHQAFVR 248 (536)
T ss_dssp EEECCBCCSEEEECEESBCTTSBBCCGGGGGGGSCTTTEEEEESCEEEEEEECCS--SSCBEEEEEEECTTSCEEEEEEE
T ss_pred CCcccCCCCCceeeeEEECCCCeEecHHHhhhhhcCCCcEEEeCCEEEEEEECCC--CCCEEEEEEEEeCCCceEEEEec
Confidence 5433344445555545455788898877777777889999999999999999863 12389999998656765555321
Q ss_pred cCCCcEEEEccCCcCcHHHHHhhc--------CCCceeeecCCccCCCCCCCCCceEEeeCCCcccchhhHhhcccccch
Q 008163 269 NGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGS 340 (575)
Q Consensus 269 ~~aa~~VVlAaG~~~sp~lLl~Sg--------~~gi~~~~~~p~vG~~l~dh~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (575)
++++||||||+++||+||++|| ++||+++.++|+||+||+||+...+.+.++.+............ ..
T Consensus 249 --a~k~VILaaGa~~sp~lL~~SGig~~~~l~~~gi~~~~dlP~VG~NL~DH~~~~~~~~~~~~~~~~~~~~~~~~--~~ 324 (536)
T 1ju2_A 249 --SKGEVIVSAGTIGTPQLLLLSGVGPESYLSSLNIPVVLSHPYVGQFLHDNPRNFINILPPNPIEPTIVTVLGIS--ND 324 (536)
T ss_dssp --EEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTEEEECCEEEEEEECCSSCCCCCCCCEEEEC--SS
T ss_pred --cCCEEEEcCcccCCHHHHHHcCCCCHHHHHhcCCceEecCcccccchhcCcceeEEEEeCCCcccccchhhhHH--HH
Confidence 4799999999999999999998 78999999999999999999988887766544221110000110 01
Q ss_pred hhhhccCCcccCCCCCCCCCCCcccccccccCCCCCCCCHHHHHHHHhhhccCCCCCccceeEEeeecccCcceEEEc-c
Q 008163 341 YIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLEL-R 419 (575)
Q Consensus 341 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~g~v~l-~ 419 (575)
|.....|+ +. .....+...+... ...+. ..+.++.+.+++|.|||+|+| +
T Consensus 325 ~~~~~~g~-~~-------------~~~~~~~~~~~~~-------------~~~~~--~~~~~~~~~l~~P~SrG~V~L~~ 375 (536)
T 1ju2_A 325 FYQCSFSS-LP-------------FTTPPFGFFPSSS-------------YPLPN--STFAHFASKVAGPLSYGSLTLKS 375 (536)
T ss_dssp EEEEEEEE-CC-------------CSSCCBTTBSSSC-------------CCCCS--SCEEEEEEEESSCSCCEEEECSC
T ss_pred HHHcCCCC-CC-------------CChhhheeecCcc-------------cCCCC--cceEEEeeecCCCCcceEEEeCC
Confidence 22222221 10 0000000000000 01111 122345667789999999999 8
Q ss_pred CCCCCCCCeeecCCCCCHHHHHHHHHHHHHHHHHHhcccccccccccC-cchhhhccccCCCCcCCCCCCCCHHHHHHHH
Q 008163 420 TRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESM-SVPILVNMTASAPVNLLPRHSNASTSLEQFC 498 (575)
Q Consensus 420 ~~d~~~~p~i~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 498 (575)
++||.+.|.|+++|+.+|.|++.+.++++.+++++++.++..+...+. ..+.+.... ...|...+++++|++|+
T Consensus 376 s~Dp~~~P~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~-----~~~p~~~~~d~~~~~~i 450 (536)
T 1ju2_A 376 SSNVRVSPNVKFNYYSNLTDLSHCVSGMKKIGELLSTDALKPYKVEDLPGVEGFNILG-----IPLPKDQTDDAAFETFC 450 (536)
T ss_dssp SSCTTSCCEECCCTTCSHHHHHHHHHHHHHHHHHHTSGGGGGGCSSCCSTTCSCCBSS-----SCCCSCTTCHHHHHHHH
T ss_pred CCCcccCceecccccCCccHHHHHHHHHHHHHHHHcCccchhhhccccccCCCccccc-----cCCCcccCCHHHHHHHH
Confidence 899999999999999999999999999999999999988877654331 000000000 00233456899999999
Q ss_pred HhcccccccccccccCCcccCCCCeEeccCCceeeeccCCCCCCCCchHHHHHHHHHhhHHHHHHH
Q 008163 499 RDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYVNLTTSKY 564 (575)
Q Consensus 499 ~~~~~~~~H~~Gt~~MG~VVD~~~rv~g~~nL~V~DaSv~P~~~~~NP~lTi~Ala~r~a~~i~~~ 564 (575)
+....+.+|++||||||+|||++|||||++||||||+||||+.+++||++|+||||||+|+.|+++
T Consensus 451 r~~~~t~~H~~GTcrMG~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~t~~aiAer~A~~ii~~ 516 (536)
T 1ju2_A 451 RESVASYWHYHGGCLVGKVLDGDFRVTGINALRVVDGSTFPYTPASHPQGFYLMLGRYVGIKILQE 516 (536)
T ss_dssp HHHCEECSCCEESSCBTTTBCTTSBBTTCBTEEECSGGGCSSCSSSSCHHHHHHHHHHHHHHHHHH
T ss_pred HhccCccccCcCccCCccEECCCCeEcCCCCeEEeecccCCCCCCcchHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999988755
No 3
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=100.00 E-value=2.1e-74 Score=623.33 Aligned_cols=478 Identities=23% Similarity=0.297 Sum_probs=348.9
Q ss_pred CCCcccEEEECCCcchhHHHHhhcC--CCeEEEEeccCCCC-CCCCcccchhhhhcc---CCCCCCCCCCcccCCCcccc
Q 008163 44 PVSYYDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSPY-GNPNITNLGSFGAAL---SDLSSTSPSQRFISEDGVIN 117 (575)
Q Consensus 44 ~~~~~DvIIVGsG~aG~~~A~~La~--G~~VlvLE~G~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 117 (575)
..++|||||||+|.+||++|.||+| +.+|||||+|+... ..+.+..+..+...+ .+|.|.+.++. ..++.+.+
T Consensus 16 ~~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~~q~-~~~r~~~~ 94 (583)
T 3qvp_A 16 SGRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDIFGSSVDHAYETVELA-TNNQTALI 94 (583)
T ss_dssp TTCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSCCCTTSCHHHHBGGGTTTTTTSTTBCCEECCCCT-TTSCCCEE
T ss_pred CCCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCcceechhhHHhhcCCcccCCccccccC-CCCCeeec
Confidence 4568999999999999999999998 79999999998432 234444555554433 36888888775 57788899
Q ss_pred cCcceecchhhcccceecCCChhhhhc------C-CCChhhhhhhhhhhhhhcc---------------cC---------
Q 008163 118 SRARVLGGGSCLNAGFYTRAAPYYVRE------V-GWDERLVNESYQWVEKVVA---------------FE--------- 166 (575)
Q Consensus 118 ~~g~~lGG~s~~~~~~~~r~~~~~~~~------~-gw~~~~l~~~~~~~~~~~~---------------~~--------- 166 (575)
+||++|||+|.+|+|.|.|+++.+++. . +|+|+++.+||++.|.... ++
T Consensus 95 ~rGk~LGGsS~iN~m~y~Rg~~~Dyd~W~~~g~~~gW~~~~~lpyf~k~E~~~~~~~~~~~~~~~~~~~~hG~~Gpl~v~ 174 (583)
T 3qvp_A 95 RSGNGLGGSTLVNGGTWTRPHKAQVDSWETVFGNEGWNWDNVAAYSLQAERARAPNAKQIAAGHYFNASCHGVNGTVHAG 174 (583)
T ss_dssp CCBCSTTGGGGTSCCBCCCCCHHHHHHHHHTSCCTTCSHHHHHHHHHHHEEECCCCHHHHHHTCCCCGGGSCSSSSEEEB
T ss_pred cCceecCCcCcccceEEEeCCHHHHHHHHHhCCCCCCChhHHHHHHHHHHhccCCcchhhcccccCCccccCCCCCEEec
Confidence 999999999999999999999865543 3 8999999999999987531 00
Q ss_pred -C----CCchhHHHHHHHHHHcCCCCCCCCCcCCCCcceeeeeE----ECCCCccccHHH-hhh-hcCCCCeEEEcCcEE
Q 008163 167 -P----PMRQWQSAVRDGLVEVGVLPYNGFTYDHMYGTKIGGTI----FDQNGQRHTAAD-LLE-YANPSGLTLLLHASV 235 (575)
Q Consensus 167 -~----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~g~r~~~~~-~l~-~~~~~g~~v~~~~~V 235 (575)
+ ...++...+.+++++.|++...++. .+...|..+ ...+|.|+++.. |+. ..++.|++|++++.|
T Consensus 175 ~~~~~~~~~~~~~~~~~a~~~~G~~~~~D~n----~~~~~G~~~~~~t~~~~g~R~saa~ayL~p~~~r~NL~V~t~a~V 250 (583)
T 3qvp_A 175 PRDTGDDYSPIVKALMSAVEDRGVPTKKDFG----CGDPHGVSMFPNTLHEDQVRSDAAREWLLPNYQRPNLQVLTGQYV 250 (583)
T ss_dssp CCCCSSCBCTHHHHHHHHHHTTTCCBCCCTT----SSCCCEEECCCBSBCTTCBBCCHHHHHTTTTTTCTTEEEECSCEE
T ss_pred CCCCcccCCHHHHHHHHHHHHcCCCcCCCCC----CCCCceecccceeEcCCCcEecHHHHHHHHhhcCCCcEEEcCCEE
Confidence 1 1235667888899999987443322 222233222 234688888765 664 677899999999999
Q ss_pred EEEEEecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCCcCcHHHHHhhc--------CCCceeeecCCccCC
Q 008163 236 HKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQ 307 (575)
Q Consensus 236 ~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~~~sp~lLl~Sg--------~~gi~~~~~~p~vG~ 307 (575)
++|+++..+ ...+++||++.+.+|+.++++ ++|+||||||+|+||+|||+|| ++||+++.++| ||+
T Consensus 251 ~rIl~d~~~-~~~ra~GV~~~~~~G~~~~v~----A~kEVILsAGa~~SPqLL~lSGIGp~~~L~~~GI~vv~dLP-VG~ 324 (583)
T 3qvp_A 251 GKVLLSQNG-TTPRAVGVEFGTHKGNTHNVY----AKHEVLLAAGSAVSPTILEYSGIGMKSILEPLGIDTVVDLP-VGL 324 (583)
T ss_dssp EEEEEECSS-SSCEEEEEEEESSTTCEEEEE----EEEEEEECSCTTTHHHHHHHTTBSCHHHHGGGTCCCSBCCC-TTC
T ss_pred EEEEeccCC-CCCEEEEEEEEecCCcEEEEE----ECCEEEEeCCccCCHHHHHHcCCCCHHHHHhCCCCceeeCc-ccc
Confidence 999998411 113999999986578877887 6689999999999999999999 99999999999 999
Q ss_pred CCCCCCCceEEeeCCCccc--------chhhHhhccc--ccchhhhhccCCcccCCCCCCCCCCCcccccccccCCCCCC
Q 008163 308 GMSDNPMNAIFVPSPVPVE--------VSLIQVVGIT--QFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQ 377 (575)
Q Consensus 308 ~l~dh~~~~~~~~~~~~~~--------~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (575)
||+||+.+.+.+..+.+.. .++...++.. ....|.....+. |.. . . .+.+.+.
T Consensus 325 NLqDH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------~--~--~~~~~~~------ 387 (583)
T 3qvp_A 325 NLQDQTTATVRSRITSAGAGQGQAAWFATFNETFGDYSEKAHELLNTKLEQ-WAE------E--A--VARGGFH------ 387 (583)
T ss_dssp CBBCCEEEEEEEEECGGGCSBCEEEEEEEHHHHHGGGHHHHHHHHHHCHHH-HHH------H--H--HHTTSCS------
T ss_pred chhhCccceEEEEecCCccccccccccccHHHhhccchHHHHHHHHhhcch-hhc------c--c--ccccCcc------
Confidence 9999999888887653210 0111100000 000111110000 000 0 0 0000000
Q ss_pred CCHHHHHHHHhh----h--ccCCCC-----CccceeEEeeecccCcceEEEccCCCCCCCCee-ecCCCCCHHHHHHHHH
Q 008163 378 RTPEAIAEAIEN----M--KALDDP-----AFRGGFILEKVMGPVSTGHLELRTRNPNDNPSV-TFNYFKEPEDLQRCVQ 445 (575)
Q Consensus 378 ~~~~~~~~~~~~----~--~~~~~~-----~~~~~~~~~~~~~p~s~g~v~l~~~d~~~~p~i-~~~~~~~~~D~~~~~~ 445 (575)
....++..+.. . ...+.. ......+.....+|.|||+|+|+++||.+.|.| +++|+.+|.|++.+.+
T Consensus 388 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~SrG~v~l~s~dp~~~P~i~~~~yl~~~~D~~~~~~ 466 (583)
T 3qvp_A 388 -NTTALLIQYENYRDWIVNHNVAYSELFLDTAGVASFDVWDLLPFTRGYVHILDKDPYLHHFAYDPQYFLNELDLLGQAA 466 (583)
T ss_dssp -CHHHHHHHHHHHHHHHHHSCCEEEEEEEECTTSEEEEEEESSCCCCBEEEESSSCGGGCCEEEECCTTCSHHHHHHHHH
T ss_pred -ccHHHHhhhccchhhhccCCCCcceeeeccCCCceeeeeecccCCceEEEecCCCCCCCcccccCCCCCCHHHHHHHHH
Confidence 01111111100 0 000000 001223334458999999999999999999999 9999999999999999
Q ss_pred HHHHHHHHHhcccccccccccCcchhhhccccCCCCcCCCC----CCCCHHHHHHHHHhcccccccccccccCC-----c
Q 008163 446 GISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLLPR----HSNASTSLEQFCRDTVMTIWHYHGGCQVG-----K 516 (575)
Q Consensus 446 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~----~~~~~~~~~~~~~~~~~~~~H~~Gt~~MG-----~ 516 (575)
+++.+++++++.+++.+...+ ..|. ..+++++|++|+|....+.+|++|||||| +
T Consensus 467 ~~~~~~~i~~~~~~~~~~~~~----------------~~pg~~~~~~~sd~~~~~~~r~~~~t~~H~~GTc~Mg~~~~~~ 530 (583)
T 3qvp_A 467 ATQLARNISNSGAMQTYFAGE----------------TIPGDNLAYDADLSAWTEYIPYHFRPNYHGVGTCSMMPKEMGG 530 (583)
T ss_dssp HHHHHHHHHTSTTHHHHEEEE----------------EESGGGSCTTCCHHHHHHHGGGSCEECSCCBCTTCBSCGGGTC
T ss_pred HHHHHHHHHhCcchhhccccc----------------cCCCcccccCCCHHHHHHHHHhccCCCcCCCCceeCCCCCCCc
Confidence 999999999988877765433 1121 23689999999999999999999999999 6
Q ss_pred ccCCCCeEeccCCceeeeccCCCCCCCCchHHHHHHHHHhhHHHHHHHHH
Q 008163 517 VVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYVNLTTSKYVS 566 (575)
Q Consensus 517 VVD~~~rv~g~~nL~V~DaSv~P~~~~~NP~lTi~Ala~r~a~~i~~~~~ 566 (575)
|||++|||||++||||||+||||+.+++||++|+||||||+||+|++++.
T Consensus 531 VVD~~lrV~Gv~~LrVvDaSv~P~~~~~n~~~t~~aiaeraAd~I~~~~~ 580 (583)
T 3qvp_A 531 VVDNAARVYGVQGLRVIDGSIPPTQMSSHVMTVFYAMALKISDAILEDYA 580 (583)
T ss_dssp SBCTTCBBTTCBSEEECSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred eECCCCeEecCCCeEEeecccCCCCCCcCcHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999875
No 4
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=100.00 E-value=2.8e-71 Score=599.71 Aligned_cols=485 Identities=21% Similarity=0.261 Sum_probs=343.2
Q ss_pred CCcccEEEECCCcchhHHHHhhcC-C-CeEEEEeccCCC-CCCCCcccchhhhhcc---CCCCCCCCCCcccCCCccc--
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ-N-ASVLLLERGGSP-YGNPNITNLGSFGAAL---SDLSSTSPSQRFISEDGVI-- 116 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~-G-~~VlvLE~G~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-- 116 (575)
.++|||||||+|.|||++|.+|+| + .||||||+|+.. ...+.+..|..+...+ .+|.|.+. ..++...
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~~~~~~~~i~~P~~~~~~~~~~~dW~y~t~----~~~r~~~~~ 79 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIGNPEDIPEITTPSSAMDLRNSKYDWAYKTT----MVRRDDYER 79 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCSCGGGCHHHHCGGGGGGGTTSTTBCCEEEE----EEEETTEEE
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCceEECchhhhhccCCCcccceEEE----ECCcccccc
Confidence 357999999999999999999999 6 799999999863 2223333444443322 25665544 3344444
Q ss_pred ----ccCcceecchhhcccceecCCChhhhhc------CCCChhhhhhhhhhhhhhcccC--------------------
Q 008163 117 ----NSRARVLGGGSCLNAGFYTRAAPYYVRE------VGWDERLVNESYQWVEKVVAFE-------------------- 166 (575)
Q Consensus 117 ----~~~g~~lGG~s~~~~~~~~r~~~~~~~~------~gw~~~~l~~~~~~~~~~~~~~-------------------- 166 (575)
++||+++||+|.+|+|.|.|+.+.+++. .+|.|+++.+||++.|......
T Consensus 80 ~~~~~~rGkvLGGsS~iN~m~~~rg~~~dyd~W~~~G~~gW~~~~~lpyf~k~e~~~~~~~~~~~~~~~hG~~Gpl~v~~ 159 (577)
T 3q9t_A 80 IEKPNTRGKTLGGSSSLNYFTWVPGHKATFDQWEEFGGKEWTWDPLVPYLRKSATYHDDPRLYSPELEKIGGGGPIPISH 159 (577)
T ss_dssp EEEEECCBCSTTGGGGTSCCEECCCCHHHHHTTHHHHCGGGSHHHHHHHHHHTEEEECTTCCSCGGGGGGCCSCSEEEEE
T ss_pred ccccccccccccCccccCceEeccCCHHHHHHHHHhCCCCCCHHHHHHHHHHHhccCCCccccCCccccCCCCCCEEeeC
Confidence 8999999999999999999999865543 5799999999999987653211
Q ss_pred CC----CchhHHHHHHHHHHcCCCCCCCCCcCCCCcceeeeeEE---CCCCccccHHHhhhhcCCCCeEEEcCcEEEEEE
Q 008163 167 PP----MRQWQSAVRDGLVEVGVLPYNGFTYDHMYGTKIGGTIF---DQNGQRHTAADLLEYANPSGLTLLLHASVHKVL 239 (575)
Q Consensus 167 ~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~g~r~~~~~~l~~~~~~g~~v~~~~~V~~l~ 239 (575)
+. ..++...+.+++++.|++...+.. .+...|...+ ..+|.|+++..+ ..++.|++|++++.|++|+
T Consensus 160 ~~~~~~~~~~~~~~~~a~~~~G~~~~~d~n----~~~~~G~~~~~~~~~~g~R~s~~~~--l~~r~Nl~v~~~a~v~ri~ 233 (577)
T 3q9t_A 160 AELIDEMAPFRENLTKAWKSMGQPLIENIY----DGEMDGLTHCCDTIYRGQRSGSFLF--VKNKPNITIVPEVHSKRLI 233 (577)
T ss_dssp CCCCGGGHHHHHHHHHHHHHTTCCBCSCCS----SSCCCEEEECEESEETTEECCGGGG--SSSCTTEEEECSEEEEEEE
T ss_pred CCCCcccchHHHHHHHHHHHcCCCcCCCCC----CCCcCeEEeecceecCCeEeeHHHH--HhcCCCeEEEcCcEEEEEE
Confidence 00 112556677888899986433221 2222222221 146778766544 3567899999999999999
Q ss_pred EecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCCcCcHHHHHhhc--------CCCceeeecCCccCCCCCC
Q 008163 240 FRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSD 311 (575)
Q Consensus 240 ~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~~~sp~lLl~Sg--------~~gi~~~~~~p~vG~~l~d 311 (575)
++..+ .+++||++.+.+|+.++++ ++|+||||||+|+||+|||+|| ++||+++.++|.||+||+|
T Consensus 234 ~~~~~---~~a~GV~~~~~~g~~~~v~----A~keVILsaGa~~sp~lL~~SGIGp~~~L~~~GI~vv~dlP~VG~nl~D 306 (577)
T 3q9t_A 234 INEAD---RTCKGVTVVTAAGNELNFF----ADREVILSQGVFETPKLLMLSGIGPTRELSRHGINTIVDSRHVGQNLMD 306 (577)
T ss_dssp EETTT---TEEEEEEEEETTSCEEEEE----EEEEEEECSHHHHHHHHHHHTTEECHHHHHTTTCCCSEECTTTTEEEBC
T ss_pred EeCCC---CEEEEEEEEeCCCcEEEEE----eeeEEEEcccccCChHHHHHcCCCCHHHHHHcCCCeeccCchhhhhhhc
Confidence 98421 2999999997558777777 6699999999999999999999 9999999999999999999
Q ss_pred CCCceEEeeCCCcccchh--hH--hhcccccchhhhhccCCcccCCCCCCCCCCCccccc---------------ccccC
Q 008163 312 NPMNAIFVPSPVPVEVSL--IQ--VVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKI---------------GQLSK 372 (575)
Q Consensus 312 h~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---------------~~~~~ 372 (575)
|+.+.+.+..+.+..... .. .........|...++|+.-. .. ....++..... .....
T Consensus 307 H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~Gpl~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (577)
T 3q9t_A 307 HPGVPFVLRVKDGFGMDDVLLRHGPKRDAVVSAYNKNRSGPVGS-GL--LELVGFPRIDKYLEKDAEYRKAKAANGGKDP 383 (577)
T ss_dssp CEEEEEEEEECTTSSSHHHHTSCSHHHHHHHHHHHHHSCSGGGC-CS--EEEEEECCCHHHHTTCHHHHHHHHHTTTSCS
T ss_pred CcceeEEEEeCCCCccchhhhcchhHHHHHHHHHHhcCCCCccc-ch--hheeEEeecChhhhcchhhhhhhhccccccc
Confidence 999888887665432110 00 00011123455444554110 00 00000000000 00000
Q ss_pred -CCCCCCCHHH-H-HHHHhhhc-cCC-CCCccceeEEeeecccCcce-EEEccCCCCCCCCeeecCCCCCHHHHHHHHHH
Q 008163 373 -VPPKQRTPEA-I-AEAIENMK-ALD-DPAFRGGFILEKVMGPVSTG-HLELRTRNPNDNPSVTFNYFKEPEDLQRCVQG 446 (575)
Q Consensus 373 -~~~~~~~~~~-~-~~~~~~~~-~~~-~~~~~~~~~~~~~~~p~s~g-~v~l~~~d~~~~p~i~~~~~~~~~D~~~~~~~ 446 (575)
.+......++ + ..+..... ..+ .....++++...+.+|.||| +|+|+|+||.+.|.|+++|+.+|.|++.+.++
T Consensus 384 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~SrGG~V~L~S~dp~~~P~i~p~yl~~~~D~~~~~~~ 463 (577)
T 3q9t_A 384 FSPLGQPHFELDFVCMFGTAFQWHFPTPKTGDHLTVVVDLVRPISDPGEVTLNSADPFQQPNINLNFFANDLDIIAMREG 463 (577)
T ss_dssp SCTTSCCSEEEEEESSCCGGGCSSSCCCSSSEEEEEEEEESSCCSCCEEEECSCSCTTSCCEEECCTTCSHHHHHHHHHH
T ss_pred cCCCCCceEEEEecccccccccccccCCCCCCEEEEEEEeeeccccCCEEEeCCCCCCCCceEecCcCCCccHHHHHHHH
Confidence 0000000000 0 00000000 000 01113456777889999999 99999999999999999999999999999999
Q ss_pred HHHHHHHH-hcccccccccccCcchhhhccccCCCCcCCC-CCCCCHHHHHHHHHhcccccccccccccCC-----cccC
Q 008163 447 ISTIEKII-ESKSFSKFKYESMSVPILVNMTASAPVNLLP-RHSNASTSLEQFCRDTVMTIWHYHGGCQVG-----KVVD 519 (575)
Q Consensus 447 ~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~H~~Gt~~MG-----~VVD 519 (575)
++.+++++ ++.+++.+...+ ..| ...++|++|++|+|+...+.+|++|||||| +|||
T Consensus 464 ~~~~~~i~~~~~~~~~~~~~e----------------~~p~~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~~VVD 527 (577)
T 3q9t_A 464 IRFSYDLLFKGEGFKDLVESE----------------YPWEMPLDSDKEMHRAVLDRCQTAFHPTGTARLSKNIDQGVVD 527 (577)
T ss_dssp HHHHHHHHHHSTTGGGTEEEE----------------ESSCCCTTCHHHHHHHHHHHCEECSCCBCTTCBCSSTTTCSBC
T ss_pred HHHHHHHHHhChhhhhccccc----------------cCCCCCcCCHHHHHHHHHhccccccccccceecCCCCCCceEC
Confidence 99999999 888887766544 222 245789999999999999999999999999 5999
Q ss_pred CCCeEeccCCceeeeccCCCCCCCCchHHHHHHHHHhhHHHHHHHH
Q 008163 520 HDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYVNLTTSKYV 565 (575)
Q Consensus 520 ~~~rv~g~~nL~V~DaSv~P~~~~~NP~lTi~Ala~r~a~~i~~~~ 565 (575)
+++||||++||||||+||||+.+++||++|+||||||+||+|+++.
T Consensus 528 ~~lrV~Gv~~LrVvDaSv~P~~~~~n~~a~~~~iaekaAd~I~~~~ 573 (577)
T 3q9t_A 528 PKLKVHGIKKLRVADASVIPIIPDCRIQNSVYAVGEKCADMIKAEH 573 (577)
T ss_dssp TTCBBTTCBSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred CCCeEeCCCCcEEeecccccCCCCCccHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999875
No 5
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=100.00 E-value=2.8e-69 Score=588.80 Aligned_cols=491 Identities=21% Similarity=0.236 Sum_probs=348.9
Q ss_pred CCcccEEEECCCcchhHHHHhhcC--CCeEEEEeccCCCCCCCCcc-cchhhhhcc---CCCCCCCCCCcccCCCccccc
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSPYGNPNIT-NLGSFGAAL---SDLSSTSPSQRFISEDGVINS 118 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~--G~~VlvLE~G~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 118 (575)
+.+|||||||+|.+|+++|.+|++ |.+|+|||+|......+... .+..+...+ .+|.|.+.+ ...++.+.++
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~p--~~~~~~~~~~ 99 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQIFGTTVDQNYLTVP--LINNRTNNIK 99 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCCTTSCHHHHCGGGTTTTTTSTTBCCEECCC--CTTSCCCEEC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCccCCCcccccChhhHhhccCCcccccccccc--CCCCceeeee
Confidence 457999999999999999999999 89999999998764333333 343333322 256665555 4567788899
Q ss_pred CcceecchhhcccceecCCChhhhhc-------CCCChhhhhhhhhhhhhhccc-----------CC-------------
Q 008163 119 RARVLGGGSCLNAGFYTRAAPYYVRE-------VGWDERLVNESYQWVEKVVAF-----------EP------------- 167 (575)
Q Consensus 119 ~g~~lGG~s~~~~~~~~r~~~~~~~~-------~gw~~~~l~~~~~~~~~~~~~-----------~~------------- 167 (575)
+|++|||+|.+|++.+.|+.+.+++. .+|+|+++.|||+++|+.+.. .+
T Consensus 100 rGk~lGGsS~in~~~~~R~~~~D~d~W~~~~G~~gW~~~~l~pyf~k~E~~~~~~~~~~~~G~~~~~~~~g~~Gpl~v~~ 179 (587)
T 1gpe_A 100 AGKGLGGSTLINGDSWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNGTVQSGA 179 (587)
T ss_dssp CBCSTTGGGGTSCCEECCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHTEEECCCCHHHHHHTCCCCGGGCCBSSSEEEBC
T ss_pred ccccccccccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhcccCCcccccccccccCccccCCCCCEEEcc
Confidence 99999999999999999999965542 479999999999999986542 00
Q ss_pred -----CCchhHHHHHHHHHHcCCCCCCCCCcCCCCcceeeeeEECCCCccccHHH-hhh-hcCCCCeEEEcCcEEEEEEE
Q 008163 168 -----PMRQWQSAVRDGLVEVGVLPYNGFTYDHMYGTKIGGTIFDQNGQRHTAAD-LLE-YANPSGLTLLLHASVHKVLF 240 (575)
Q Consensus 168 -----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~-~l~-~~~~~g~~v~~~~~V~~l~~ 240 (575)
...+..+.+.++++++|++...+.......|+.......+.+|.|+++.. |+. .+++.|++|++++.|++|++
T Consensus 180 ~~~~~~~~~~~~~~~~a~~~~G~~~~~d~n~~~~~G~~~~~~~~~~~g~R~sa~~~~l~~~~~~~nl~i~~~~~v~~l~~ 259 (587)
T 1gpe_A 180 RDNGQPWSPIMKALMNTVSALGVPVQQDFLCGHPRGVSMIMNNLDENQVRVDAARAWLLPNYQRSNLEILTGQMVGKVLF 259 (587)
T ss_dssp CCCSSCBCTHHHHHHHHHHHTTCCBSCCTTSSCCCEEECCEESBCTTCCBCCHHHHHTTTTTTCTTEEEEESCEEEEEEE
T ss_pred CCCcCCCCHHHHHHHHHHHHcCCCcCCCCCCCCCCEEEecceEECCCCcccCHHHHHHHHhhcCCCcEEEcCCEEEEEEE
Confidence 12345677889999999875433221111222221111124678888765 774 66788999999999999999
Q ss_pred ecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCCcCcHHHHHhhc--------CCCceeeecCCccCCCCCCC
Q 008163 241 RIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDN 312 (575)
Q Consensus 241 ~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~~~sp~lLl~Sg--------~~gi~~~~~~p~vG~~l~dh 312 (575)
++++ +..+++||++.+.+|+.++++ ++|+||||||+|+||+||++|| ++||+++.++| ||+||+||
T Consensus 260 ~~~~-~~~~~~GV~~~~~~g~~~~v~----A~k~VILaaG~~~sp~lL~~SGIGp~~~L~~~gI~vv~dlP-VG~nL~DH 333 (587)
T 1gpe_A 260 KQTA-SGPQAVGVNFGTNKAVNFDVF----AKHEVLLAAGSAISPLILEYSGIGLKSVLDQANVTQLLDLP-VGINMQDQ 333 (587)
T ss_dssp EEET-TEEEEEEEEEEEETTEEEEEE----EEEEEEECSCTTTHHHHHHHTTEECHHHHHHTTCCCSEECC-TTCSBBCC
T ss_pred CCCC-CCCEEEEEEEEeCCCcEEEEE----ecccEEEccCCCCCHHHHHhCCCCCHHHHHhCCCCeEEeCC-CCcchhcC
Confidence 8521 112899999985577777776 4599999999999999999999 89999999999 99999999
Q ss_pred CCceEEeeCCCcccchhhHhhccc-ccchhhhhccCCcccCCCCCCCCC-CCcccccccccCCCCCCC--CHHHHHHHHh
Q 008163 313 PMNAIFVPSPVPVEVSLIQVVGIT-QFGSYIEAASGENFAGGSPSPRDY-GMFSPKIGQLSKVPPKQR--TPEAIAEAIE 388 (575)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 388 (575)
+...+.+.++.+... ........ ....|.....|+.-. . .... .+...... ........ .++ ++..+.
T Consensus 334 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~G~~~~-~---~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~ 405 (587)
T 1gpe_A 334 TTTTVSSRASSAGAG-QGQAVFFANFTETFGDYAPQARDL-L---NTKLDQWAEETVA--RGGFHNVTALKVQ-YENYRN 405 (587)
T ss_dssp EEEEEEEEECGGGCS-BCEEEEEEEHHHHHGGGHHHHHHH-H---HHSHHHHHHHHHH--TTSCSCHHHHHHH-HHHHHH
T ss_pred cccceEEEeCCCccc-ccchHHHHHHHHHHHhCCCCCccc-c---ccceeeEeecccc--ccccccccccccc-HHHHhh
Confidence 998888776543210 00000000 011122222221000 0 0000 00000000 00000000 111 111111
Q ss_pred hh-c-cCCCC-----CccceeEEeeecccCcceEEEccCCCCCCCC-eeecCCCCCHHHHHHHHHHHHHHHHHHhccccc
Q 008163 389 NM-K-ALDDP-----AFRGGFILEKVMGPVSTGHLELRTRNPNDNP-SVTFNYFKEPEDLQRCVQGISTIEKIIESKSFS 460 (575)
Q Consensus 389 ~~-~-~~~~~-----~~~~~~~~~~~~~p~s~g~v~l~~~d~~~~p-~i~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~ 460 (575)
.+ . ..+.. ....+++...+++|.|||+|+|+++|+++.| .|+++|+.++.|++.+.++++.+++++++.++.
T Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~srG~V~L~s~dp~~~P~~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~ 485 (587)
T 1gpe_A 406 WLLDEDVAFAELFMDTEGKINFDLWDLIPFTRGSVHILSSDPYLWQFANDPKFFLNEFDLLGQAAASKLARDLTSQGAMK 485 (587)
T ss_dssp HHHHSCCEEEEEEEECTTEEEEEEEESSCCCCBEEEESSSCGGGTCEEEECCTTSSHHHHHHHHHHHHHHHHHHTSTTHH
T ss_pred hccCCCCcceeeeecCCCcEEEEEEecCCccceeEEeCCCCcccCccEeecccCCChHHHHHHHHHHHHHHHHHcCcchh
Confidence 11 0 01000 0123455567789999999999999999999 999999999999999999999999999998877
Q ss_pred ccccccCcchhhhccccCCCCcCCCC----CCCCHHHHHHHHHhcccccccccccccCC-----cccCCCCeEeccCCce
Q 008163 461 KFKYESMSVPILVNMTASAPVNLLPR----HSNASTSLEQFCRDTVMTIWHYHGGCQVG-----KVVDHDYKVLGVDALR 531 (575)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~p~----~~~~~~~~~~~~~~~~~~~~H~~Gt~~MG-----~VVD~~~rv~g~~nL~ 531 (575)
.+...+ ..|. ..+++++|++|++....+.+|++|||||| +|||++|||||++|||
T Consensus 486 ~~~~~~----------------~~pg~~~~~~~sd~~~~~~ir~~~~t~~H~~GTcrMG~~~~~sVVD~~lrV~Gv~nLr 549 (587)
T 1gpe_A 486 EYFAGE----------------TLPGYNLVQNATLSQWSDYVLQNFRPNWHAVSSCSMMSRELGGVVDATAKVYGTQGLR 549 (587)
T ss_dssp HHEEEE----------------EESGGGSCTTCCHHHHHHHHHHSCEECSCCBCTTCBSCGGGTCSBCTTCBBTTCBSEE
T ss_pred hhcccc----------------cCCCccccCCCCHHHHHHHHHHhcCcccCccCccccCCCCCCceECCCCEEECCCCcE
Confidence 665433 1121 12689999999999999999999999999 4999999999999999
Q ss_pred eeeccCCCCCCCCchHHHHHHHHHhhHHHHHHHHHH
Q 008163 532 VIDGSTFYYSPGTNPQATVMMLGRYVNLTTSKYVSK 567 (575)
Q Consensus 532 V~DaSv~P~~~~~NP~lTi~Ala~r~a~~i~~~~~~ 567 (575)
|||+||||+.+++||++|+||||+|+||+|++++++
T Consensus 550 VvDaSv~P~~~~~Np~~ti~aiAeraAd~I~~~~~~ 585 (587)
T 1gpe_A 550 VIDGSIPPTQVSSHVMTIFYGMALKVADAILDDYAK 585 (587)
T ss_dssp ECSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeeeccCCCCCCcchHHHHHHHHHHHHHHHHhhhhc
Confidence 999999999999999999999999999999998764
No 6
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=100.00 E-value=5.6e-69 Score=583.97 Aligned_cols=462 Identities=24% Similarity=0.348 Sum_probs=339.3
Q ss_pred CcccEEEECCCcchhHHHHhhcC--CCeEEEEeccCCCCCCCCcccchhhhhcc---CCCCCCCCCCcccCCCcccccCc
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSPYGNPNITNLGSFGAAL---SDLSSTSPSQRFISEDGVINSRA 120 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~--G~~VlvLE~G~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g 120 (575)
.+|||||||||++|+++|.||+| |+||||||+|+... .+.+..+..+.... .+|.|.+.++....++.+.+++|
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~~~-~~~~~~p~~~~~~~~~~~dw~~~t~p~~~~~~~~~~~~rG 94 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEEPT-DPDIWNPAAWPALQGRSYDWDYRTEAQAGTAGRAHHWARG 94 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBCCC-CGGGGSGGGGGGTTTSTTBCCEECCCBGGGTTBCCEECCB
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCCCC-CcchhChhhHhhccCCccccCccccccCCCCCCeEeccCc
Confidence 47999999999999999999998 68999999998643 23444454443322 36888889999999999999999
Q ss_pred ceecchhhcccceecCCChhhhhc-------CCCChhhhhhhhhhhhhhcccCC----------------CCchhHHHHH
Q 008163 121 RVLGGGSCLNAGFYTRAAPYYVRE-------VGWDERLVNESYQWVEKVVAFEP----------------PMRQWQSAVR 177 (575)
Q Consensus 121 ~~lGG~s~~~~~~~~r~~~~~~~~-------~gw~~~~l~~~~~~~~~~~~~~~----------------~~~~~~~~~~ 177 (575)
++|||+|.+|++.+.|+.+.+++. .+|+|+++.+||++.|....... ...++...+.
T Consensus 95 ~~lGGsS~in~~~~~R~~~~Dfd~w~~~~~~~~w~~~~~~pyf~~~E~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~~~ 174 (526)
T 3t37_A 95 RLIGGSSCLHAMGYMRGHPSDFQAWVDASGDRRWGWDELLPVFQAIEDHPLGGDGIHGKGGPLPIHLPADEVSPLARAFI 174 (526)
T ss_dssp CBTTGGGGTSCCBCCCCCHHHHHHHHHHHSCGGGSHHHHHHHHHHHEECTTTTSSSSCSSCSEECBCCSTTSCHHHHHHH
T ss_pred cEECcHHHHhhCEEecCCHHHHHHHHHhcCCCCCChhhhhhhhhhhhhccCCCccccCcCCCcCcccccccCCHHHHHHH
Confidence 999999999999999999875542 56999999999999987643211 1234567788
Q ss_pred HHHHHcCCCCCCCCCcCCCCcceeeeeEECCCCccccHHH-hh-h-hcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEE
Q 008163 178 DGLVEVGVLPYNGFTYDHMYGTKIGGTIFDQNGQRHTAAD-LL-E-YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVV 254 (575)
Q Consensus 178 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~-~l-~-~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~ 254 (575)
+++.+.|++...........++... ..+...|.+.+... ++ + ...+.|++|++++.|++|+++++ +++||+
T Consensus 175 ~~~~~~G~~~~~~~~~~~~~~~~~~-~~~~~~g~r~s~~~~~~~~~~~~r~nl~v~~~~~v~~i~~~~~-----~a~gv~ 248 (526)
T 3t37_A 175 EAGASLGLPRLEGHNSGEMIGVTPN-SLNIRDGRRVTAADAWLTKAVRGRKNLTILTGSRVRRLKLEGN-----QVRSLE 248 (526)
T ss_dssp HHHHHTTCCBCSSSCSSCCBSBCCC-CBCEETTEECCHHHHHSCHHHHTCTTEEEECSCEEEEEEEETT-----EEEEEE
T ss_pred HHHHHcCCCcccCCCCCcccccccc-cccccCCcccccccccccccccCCCCeEEEeCCEEEEEEecCC-----eEEEEE
Confidence 8889999875433222111111111 11124566666554 44 3 45688999999999999999987 999999
Q ss_pred EEeCCCceeEEeeecCCCcEEEEccCCcCcHHHHHhhc--------CCCceeeecCCccCCCCCCCCCceEEee-CCCcc
Q 008163 255 FRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDNPMNAIFVP-SPVPV 325 (575)
Q Consensus 255 ~~~~~g~~~~v~~~~~aa~~VVlAaG~~~sp~lLl~Sg--------~~gi~~~~~~p~vG~~l~dh~~~~~~~~-~~~~~ 325 (575)
+.. .+...++. +++||||||+|+||+|||+|| +.+|+++.++|.||+||+||+.....+. ...+.
T Consensus 249 ~~~-~~~~~~~~-----a~~VILsAGai~SP~LLl~SGig~~~~l~~~gi~vv~dlp~VG~nl~DH~~~~~~~~~~~~~~ 322 (526)
T 3t37_A 249 VVG-RQGSAEVF-----ADQIVLCAGALESPALLMRSGIGPHDVLDAAGVGCLIDMPDIGRNLQDHLLGAGNLYAARKPV 322 (526)
T ss_dssp EEE-TTEEEEEE-----EEEEEECSHHHHHHHHHHHTTEECHHHHHHHTCCCSEECTTTTCSBBCCEEEEEEEEEESSCC
T ss_pred EEe-cCceEEEe-----ecceEEcccccCCcchhhhccCCchhhhhccCCCeEecCCccccccccccccceeEEeccCCc
Confidence 996 44455554 799999999999999999999 7899999999999999999987654432 22222
Q ss_pred cchhhHhhcccccchhhhhccCCcccCCCCCCCCCCCcccccccccCCCCCCCCHHHHHHHHhhhccCCCCCccceeEEe
Q 008163 326 EVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILE 405 (575)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (575)
..... .......+.. ... +... ....+.. ..+...... . .+ ..+ .....+++..
T Consensus 323 ~~~~~---~~~~~~~~~~--~~~-~~~~--~~~~~~~---~~~~~~~~~-~------------~~-~~~-~~~~~~~~~~ 376 (526)
T 3t37_A 323 PPSRL---QHSESMAYMR--ADS-FTAA--GQPEIVV---GCGVAPIVS-E------------SF-PAP-AAGSAYSLLF 376 (526)
T ss_dssp CCCSS---CSEEEEEEEC--SSC-SSCC--SSCCEEE---EEESSCCCC-T------------TS-CCC-CTTSEEEEEE
T ss_pred chHhh---cchhhhhhhh--ccc-cccc--CCcceee---ecccccccc-c------------cc-ccc-cCCcceeeec
Confidence 11100 0000000110 000 0000 0000000 000000000 0 00 000 1112345666
Q ss_pred eecccCcceEEEccCCCCCCCCeeecCCCCCHHHHHHHHHHHHHHHHHHhcccccccccccCcchhhhccccCCCCcCCC
Q 008163 406 KVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLLP 485 (575)
Q Consensus 406 ~~~~p~s~g~v~l~~~d~~~~p~i~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 485 (575)
.+.+|.|+|+|+++++|+.+.|.|+++|+.++.|++.++++++.+++++.+..+..+...+ ..|
T Consensus 377 ~l~~p~srG~v~~~s~dp~~~p~i~~~~~~~~~d~~~~~~~~~~~r~i~~~~~~~~~~~~~----------------~~p 440 (526)
T 3t37_A 377 GITHPTSRGSVRISGPELGDRLIIDPAYLQTGRDRERFRRALEASRTIGHRDELAGWRERE----------------LLP 440 (526)
T ss_dssp EESSCCCCBEEECSSSSTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHTCGGGTTTEEEE----------------CSS
T ss_pred cccCccccCcceeccCCCccCceeccccCCCHHHHHHHHHHHHHHHHHHcChhhhhccccc----------------cCC
Confidence 7889999999999999999999999999999999999999999999999988777765544 456
Q ss_pred CCCCCHHHHHHHHHhcccccccccccccCC----cccCCCCeEeccCCceeeeccCCCCCCCCchHHHHHHHHHhhHHHH
Q 008163 486 RHSNASTSLEQFCRDTVMTIWHYHGGCQVG----KVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYVNLTT 561 (575)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~H~~Gt~~MG----~VVD~~~rv~g~~nL~V~DaSv~P~~~~~NP~lTi~Ala~r~a~~i 561 (575)
....+++++++|++....+.+|++|||||| +|||++|||||++||||||+||||+++++||++||||||||+||+-
T Consensus 441 g~~~~~~~~~~~ir~~~~t~~H~~GTcrMG~d~~sVVD~~~rV~Gv~nL~VvDaSv~P~~~~~np~~ti~aiAEkaAd~~ 520 (526)
T 3t37_A 441 GTPNSAAEMDDFIARSVITHHHPCGTCRMGKDPDAVVDANLRLKALDNLFVVDASIMPNLTAGPIHAAVLAIAETFARQY 520 (526)
T ss_dssp CCCCSHHHHHHHHHHHEEECSCCBCTTCBCSSTTCSBCTTCBBTTCSSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHhcCccCcccCccccCCCCCCccCCCCCEEcCCCCeEEEEcCcccCCcChHHHHHHHHHHHHHHHHh
Confidence 666789999999999999999999999999 5999999999999999999999999999999999999999999985
Q ss_pred H
Q 008163 562 S 562 (575)
Q Consensus 562 ~ 562 (575)
.
T Consensus 521 ~ 521 (526)
T 3t37_A 521 H 521 (526)
T ss_dssp H
T ss_pred h
Confidence 4
No 7
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=100.00 E-value=2.8e-67 Score=569.22 Aligned_cols=473 Identities=27% Similarity=0.396 Sum_probs=339.0
Q ss_pred CCcccEEEECCCcchhHHHHhhcC--CCeEEEEeccCCCCCCCCcccchhhhhcc---CCCCCCCCCCcccCCCcccccC
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSPYGNPNITNLGSFGAAL---SDLSSTSPSQRFISEDGVINSR 119 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~--G~~VlvLE~G~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 119 (575)
..+|||||||+|.+|+++|.+|++ |.+|+|||+|...........+..+...+ .+|.|.+.++.. .++.+.+++
T Consensus 11 ~~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~p~~~~~~~~~~~~w~~~~~p~~~-~~~~~~~~r 89 (546)
T 2jbv_A 11 DREFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDRGVPEVLQLDRWMELLESGYDWDYPIEPQEN-GNSFMRHAR 89 (546)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCTTCHHHHBGGGGGGGTTSTTBCCEEBCCCSS-SCTTCEECC
T ss_pred cCcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCCCCccccChhhHHhhcCCcccccccccccCC-CCceEEeec
Confidence 357999999999999999999999 79999999997653212122233332222 256666666666 667888999
Q ss_pred cceecchhhcccceecCCChhhhhc-------CCCChhhhhhhhhhhhhhcc------cC-----------CCCchhHHH
Q 008163 120 ARVLGGGSCLNAGFYTRAAPYYVRE-------VGWDERLVNESYQWVEKVVA------FE-----------PPMRQWQSA 175 (575)
Q Consensus 120 g~~lGG~s~~~~~~~~r~~~~~~~~-------~gw~~~~l~~~~~~~~~~~~------~~-----------~~~~~~~~~ 175 (575)
|++|||+|.+|++.+.|+.+.+++. .+|+|+++.|||+++|+... ++ +...+....
T Consensus 90 Gk~lGGsS~in~~~~~R~~~~d~d~w~~~~G~~gW~~~~l~pyf~k~e~~~~~~~~~~~~g~~Gpl~v~~~~~~~~~~~~ 169 (546)
T 2jbv_A 90 AKVMGGCSSHNSCIAFWAPREDLDEWEAKYGATGWNAEAAWPLYKRLETNEDAGPDAPHHGDSGPVHLMNVPPKDPTGVA 169 (546)
T ss_dssp BCSTTGGGGTSCCBCCCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHHEEETTCBTTBTTSCBSCSEEEEECCSCCHHHHH
T ss_pred ccccccCccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhhccCCCCccccCCCCCCEEEecCCCCCHHHHH
Confidence 9999999999999999999854432 47999999999999987654 11 112345677
Q ss_pred HHHHHHHcCCCCCCCCCcCC--CCcceeeeeEECCCCccccHHH-hhhhc-CCCCeEEEcCcEEEEEEEecCCCCCCeEE
Q 008163 176 VRDGLVEVGVLPYNGFTYDH--MYGTKIGGTIFDQNGQRHTAAD-LLEYA-NPSGLTLLLHASVHKVLFRIKGKARPVAH 251 (575)
Q Consensus 176 ~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~g~r~~~~~-~l~~~-~~~g~~v~~~~~V~~l~~~~~~~~~~~v~ 251 (575)
+.+++++.|++.. +..... ..++......+..+|.|+++.. |+..+ ++.|++|++++.|++|++++++ +++
T Consensus 170 ~~~a~~~~G~~~~-d~n~~~~~~~g~~~~~~~~~~~g~R~s~~~a~l~~a~~~~~~~i~~~~~V~~i~~~~~~----~~~ 244 (546)
T 2jbv_A 170 LLDACEQAGIPRA-KFNTGTTVVNGANFFQINRRADGTRSSSSVSYIHPIVEQENFTLLTGLRARQLVFDADR----RCT 244 (546)
T ss_dssp HHHHHHHTTCCBC-CSSSSSCCSSEEEECEECBCTTSBBCCHHHHHTGGGTTCTTEEEECSCEEEEEEECTTS----BEE
T ss_pred HHHHHHHCCCCcc-CCCCCCcCcceEEeeeeecCCCCeEcCHHHHHHHHHhcCCCcEEEeCCEEEEEEECCCC----eEE
Confidence 8889999998754 322111 2222222111222788887655 77644 5789999999999999998732 899
Q ss_pred EEEEEeCC-CceeEEeeecCCCcEEEEccCCcCcHHHHHhhc--------CCCceeeecCCccCCCCCCCCCceEEeeCC
Q 008163 252 GVVFRDAT-GAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDNPMNAIFVPSP 322 (575)
Q Consensus 252 GV~~~~~~-g~~~~v~~~~~aa~~VVlAaG~~~sp~lLl~Sg--------~~gi~~~~~~p~vG~~l~dh~~~~~~~~~~ 322 (575)
||++.+.. |+.++++ +.|+||||||+++||+||++|| ++||+++.++|.||+||+||+...+.+.++
T Consensus 245 GV~~~~~~~g~~~~i~----A~k~VIlaaG~~~sp~lL~~SGiG~~~~L~~~gi~~~~dlP~VG~nL~dH~~~~~~~~~~ 320 (546)
T 2jbv_A 245 GVDIVDSAFGHTHRLT----ARNEVVLSTGAIDTPKLLMLSGIGPAAHLAEHGIEVLVDSPGVGEHLQDHPEGVVQFEAK 320 (546)
T ss_dssp EEEEESSTTSCEEEEE----EEEEEEECSHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCCEECCEEEEES
T ss_pred EEEEEECCCCcEEEEE----eCccEEEecCccCCchhhhhcCCCchHHHHhcCCceEeeCcchhhhhhhCccceEEEEec
Confidence 99998521 7666776 4459999999999999999999 789999999999999999999988877665
Q ss_pred CcccchhhHhhcccccchhhhhccCCcccCCCCCCCCCCCcccccccccCCCCCCCCHHHHHHHHhhhccCCCCCcccee
Q 008163 323 VPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGF 402 (575)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (575)
.+..... ........|.....+.. .++++..+. .... ..... ... .. .....++
T Consensus 321 ~~~~~~~---~~~~~~~~f~~~~~~~~---~p~~~~~~~---------~~~~-~~~~~--------~~g-~~-~~~~~~~ 374 (546)
T 2jbv_A 321 QPMVAES---TQWWEIGIFTPTEDGLD---RPDLMMHYG---------SVPF-DMNTL--------RHG-YP-TTENGFS 374 (546)
T ss_dssp SCCCSCC---SSSCCEEEEECSSTTCS---SCSEEEEEE---------SSCC-CTTTG--------GGT-CC-CCSSEEE
T ss_pred CCCcccc---cchhheEEEEecCCCCC---CCceEEEec---------cccc-ccccc--------ccC-cc-CCCCeEE
Confidence 4321100 00000011111000000 000000000 0000 00000 000 00 0112345
Q ss_pred EEeeecccCcceEEEccCCCCCCCCeeecCCCCCHH--HHHHHHHHHHHHHHHHhcccccccccccCcchhhhccccCCC
Q 008163 403 ILEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPE--DLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAP 480 (575)
Q Consensus 403 ~~~~~~~p~s~g~v~l~~~d~~~~p~i~~~~~~~~~--D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (575)
+...+++|.|||+|+|+++||++.|.|+++|+.++. |++.+.++++.+++++++.++..+...+
T Consensus 375 ~~~~~~~P~srG~V~L~s~dp~~~P~I~~~y~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~-------------- 440 (546)
T 2jbv_A 375 LTPNVTHARSRGTVRLRSRDFRDKPMVDPRYFTDPEGHDMRVMVAGIRKAREIAAQPAMAEWTGRE-------------- 440 (546)
T ss_dssp EEEEETTCCCCBEEECSSSCTTSCCEEECCTTCCTTCHHHHHHHHHHHHHHHHHTSGGGTTTEEEE--------------
T ss_pred EEEEEcccCcccEEEecCCCCCCCceecccccCCCchhHHHHHHHHHHHHHHHHcCcchhhccccc--------------
Confidence 566789999999999999999999999999999999 9999999999999999998877665333
Q ss_pred CcCCCC-CCCCHHHHHHHHHhcccccccccccccCC------cccCCCCeEeccCCceeeeccCCCCCCCCchHHHHHHH
Q 008163 481 VNLLPR-HSNASTSLEQFCRDTVMTIWHYHGGCQVG------KVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMML 553 (575)
Q Consensus 481 ~~~~p~-~~~~~~~~~~~~~~~~~~~~H~~Gt~~MG------~VVD~~~rv~g~~nL~V~DaSv~P~~~~~NP~lTi~Al 553 (575)
..|. ..+++++|++|++....+.+|++|||||| +|||++|||||++||||||+||||+++++||++|+|||
T Consensus 441 --~~p~~~~~sd~~~~~~ir~~~~~~~H~~GTcrMG~~~d~~~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~ti~ai 518 (546)
T 2jbv_A 441 --LSPGVEAQTDEELQDYIRKTHNTVYHPVGTVRMGAVEDEMSPLDPELRVKGVTGLRVADASVMPEHVTVNPNITVMMI 518 (546)
T ss_dssp --EESCTTCCSHHHHHHHHHHHCEECSCCBCTTCBCCTTCTTCSBCTTCBBTTSBSEEECSGGGCSSCCSSCCHHHHHHH
T ss_pred --ccCCCCCCCHHHHHHHHHhcCCcccccccccccCCCCCCCceECCCCEEECCCCeEEeecccCCCCCCcchHHHHHHH
Confidence 2232 45689999999999999999999999999 69999999999999999999999999999999999999
Q ss_pred HHhhHHHHHHHHHHHh
Q 008163 554 GRYVNLTTSKYVSKIL 569 (575)
Q Consensus 554 a~r~a~~i~~~~~~~~ 569 (575)
|+|+||+|++++....
T Consensus 519 AeraAd~I~~~~~~~~ 534 (546)
T 2jbv_A 519 GERCADLIRSARAGET 534 (546)
T ss_dssp HHHHHHHC--------
T ss_pred HHHHHHHHHhhcccCC
Confidence 9999999998865433
No 8
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=100.00 E-value=1.3e-58 Score=503.72 Aligned_cols=469 Identities=21% Similarity=0.244 Sum_probs=305.2
Q ss_pred CCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCCCCCCC---------------cccchhhhhccCCCCCCCCCCc
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYGNPN---------------ITNLGSFGAALSDLSSTSPSQR 108 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~ 108 (575)
+.+|||||||||++|+++|.+|++ |++|+|||+|+....... ...+..+...+.. +..
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~------~~~ 78 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDIPGLFESLFTD------SNP 78 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCCSGGGTCCCCCGGGGGGTCCTTTCGGGGGGGGTC------SCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccccccccccceeeccchhHHHhhcC------CCc
Confidence 457999999999999999999999 999999999975421100 0001101011100 000
Q ss_pred ccCCCcccccCcceecchhhcccceecCCChhhhhc-----CCCChhhhhhhhhhhhhhcccC--C------CCchhHHH
Q 008163 109 FISEDGVINSRARVLGGGSCLNAGFYTRAAPYYVRE-----VGWDERLVNESYQWVEKVVAFE--P------PMRQWQSA 175 (575)
Q Consensus 109 ~~~~~~~~~~~g~~lGG~s~~~~~~~~r~~~~~~~~-----~gw~~~~l~~~~~~~~~~~~~~--~------~~~~~~~~ 175 (575)
........+.+|+++||+|.+|++.+.|+.+.+++. .+|.+++ +||++.+...... + ...+....
T Consensus 79 ~~~~~~~~~~~g~~lGGsS~in~~~~~r~~~~d~d~~~~W~~~w~~~~--p~~~k~e~~~~~~~~~~~~g~~~~~~~~~~ 156 (546)
T 1kdg_A 79 FWWCKDITVFAGCLVGGGTSVNGALYWYPNDGDFSSSVGWPSSWTNHA--PYTSKLSSRLPSTDHPSTDGQRYLEQSFNV 156 (546)
T ss_dssp TTBCTTBSSCCBCSTTGGGGTSCCBCCCCCGGGGCGGGTCCGGGSCCH--HHHHHHHHHSCCBSCCSTTSCCCSCHHHHH
T ss_pred cccccccccccceeecccccccceEEecCChHHhcCcccCccccCccc--HHHHHHHhcCCCCccCCCCCCccCCHHHHH
Confidence 011123456899999999999999999999866654 2455555 8999988743211 1 11234466
Q ss_pred HHHHHHHcCCCCCCCC-CcC-CCCcceeeeeEECCCCccccHHH-hhh-hcCCCCeEEEcCcEEEEEEEecCCCCCCeEE
Q 008163 176 VRDGLVEVGVLPYNGF-TYD-HMYGTKIGGTIFDQNGQRHTAAD-LLE-YANPSGLTLLLHASVHKVLFRIKGKARPVAH 251 (575)
Q Consensus 176 ~~~~~~~~g~~~~~~~-~~~-~~~~~~~~~~~~~~~g~r~~~~~-~l~-~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~ 251 (575)
+.+++++.|++..... ... ...++...... ..+|.|+++.. |+. +.++.|++|++++.|++|+++++ +++
T Consensus 157 ~~~a~~~~G~~~~~~~~~~~~~~~g~~~~~~~-~~~g~R~s~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~-----~~~ 230 (546)
T 1kdg_A 157 VSQLLKGQGYNQATINDNPNYKDHVFGYSAFD-FLNGKRAGPVATYLQTALARPNFTFKTNVMVSNVVRNGS-----QIL 230 (546)
T ss_dssp HHHHHHTTTCEECCGGGSTTCCTTEEEECCBC-EETTEECHHHHTHHHHHHTCTTEEEECSCCEEEEEEETT-----EEE
T ss_pred HHHHHHHCCCCcCCccCCcCCCCcEEeeeeec-cCCCcccCHHHHHHHHHhhCCCcEEEeCCEEEEEEEeCC-----EEE
Confidence 7788888887532200 000 01111111111 14678887654 776 44567999999999999999876 999
Q ss_pred EEEEEeC-CCcee--EEeeecCCCcEEEEccCCcCcHHHHHhhc--------CC------Cceee-----ecCCccCCCC
Q 008163 252 GVVFRDA-TGAKH--RAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AH------NITVV-----LDQPLVGQGM 309 (575)
Q Consensus 252 GV~~~~~-~g~~~--~v~~~~~aa~~VVlAaG~~~sp~lLl~Sg--------~~------gi~~~-----~~~p~vG~~l 309 (575)
||++.+. +|+.+ +++ ++++||||||+++||+||++|| ++ ||+++ .++| ||+||
T Consensus 231 gV~~~~~~~g~~~~~~v~----~~~~VIlaaG~~~sp~lL~~sGig~~~~L~~~gn~s~~GI~v~~~~~~~dlp-VG~nL 305 (546)
T 1kdg_A 231 GVQTNDPTLGPNGFIPVT----PKGRVILSAGAFGTSRILFQSGIGPTDMIQTVQSNPTAAAALPPQNQWINLP-VGMNA 305 (546)
T ss_dssp EEEESCTTSSGGGEEEEE----EEEEEEECSHHHHHHHHHHHTTBSCHHHHHHHHTSHHHHHHSCCGGGCBCCC-TTTTB
T ss_pred EEEEEecCCCceeEEEEE----eCCEEEEcCChhcCHHHHHHcCCCcHHHHHHhhccccCCcccccccccccCC-cccCc
Confidence 9999753 36532 344 5899999999999999999999 22 57764 7889 99999
Q ss_pred CCCCCceEEeeCCCc-ccchhhHhh-c--ccccchhhhhccCCcccCCCCCCCCCCCcccccccccCCCCCCCCHHHHHH
Q 008163 310 SDNPMNAIFVPSPVP-VEVSLIQVV-G--ITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAE 385 (575)
Q Consensus 310 ~dh~~~~~~~~~~~~-~~~~~~~~~-~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (575)
+||+...+.+..+.. ......... . ......|...+.|+..... ...+++...... ...... ++.
T Consensus 306 ~DH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~----~~~~~~~~~~~~------~~~~~~-~~~ 374 (546)
T 1kdg_A 306 QDNPSINLVFTHPSIDAYENWADVWSNPRPADAAQYLANQSGVFAGAS----PKLNFWRAYSGS------DGFTRY-AQG 374 (546)
T ss_dssp BCCCCEEEEEECTTCCCGGGGTTTTTSCCHHHHHHHHHHSCSGGGSCS----CCEEEEEEEECT------TSCEEE-EEE
T ss_pred ccCcceeEEEecCCcccccchhhhhcchhHHHHHHHHHcCCcccccCC----cceEEEEccCCC------Ccchhh-hhh
Confidence 999998887763211 000110000 0 0111234433344311000 000011000000 000000 000
Q ss_pred HHhh----hc-cCCCCCccceeEEeeeccc-CcceEEEccCCCCCCCCeeecCCCCCHHHHHHHHHHHHHHHHHHhcccc
Q 008163 386 AIEN----MK-ALDDPAFRGGFILEKVMGP-VSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSF 459 (575)
Q Consensus 386 ~~~~----~~-~~~~~~~~~~~~~~~~~~p-~s~g~v~l~~~d~~~~p~i~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~ 459 (575)
.+.. .. ..+......+++...+.+| .|||+|+|+++| ..|.|+++|+.+|.|++.+.++++.+++++++.+.
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~srG~v~L~s~~--~~~~i~~~y~~~~~D~~~~~~~~~~~~~~~~~~~~ 452 (546)
T 1kdg_A 375 TVRPGAASVNSSLPYNASQIFTITVYLSTGIQSRGRIGIDAAL--RGTVLTPPWLVNPVDKTVLLQALHDVVSNIGSIPG 452 (546)
T ss_dssp EEEESCSCCCCSSCCCGGGEEEEEEEECTTCCCCBEEEECTTC--CEEEEECCTTCSHHHHHHHHHHHHHHTTTGGGSTT
T ss_pred eecccccccccccccCCCCeEEEEeeecCCCCCCceEecCCCC--CCCcccccccCCchHHHHHHHHHHHHHHHhcCCCc
Confidence 0000 00 0000111234555566777 999999999877 56778999999999999999999999999987642
Q ss_pred cccccccCcchhhhccccCCCCcCCCCCCCCHHHHHHHHHhcccccccccccccCC-----cccCCCCeEeccCCceeee
Q 008163 460 SKFKYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG-----KVVDHDYKVLGVDALRVID 534 (575)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~H~~Gt~~MG-----~VVD~~~rv~g~~nL~V~D 534 (575)
... ..|...++++++.+|++....+.+|++|||||| +|||++|||||++||||||
T Consensus 453 ~~~--------------------~~p~~~~~~~~~~~~~~~~~~t~~H~~GTcrMG~~~~~~VVD~~lrV~Gv~nLrVvD 512 (546)
T 1kdg_A 453 LTM--------------------ITPDVTQTLEEYVDAYDPATMNSNHWVSSTTIGSSPQSAVVDSNVKVFGTNNLFIVD 512 (546)
T ss_dssp CEE--------------------EESCTTSCHHHHHHHSCGGGGCCSCCBCTTCBCSCTTTCSBCTTCBBTTCSSEEECS
T ss_pred ccc--------------------cCCCCCCCHHHHHHHHHHhcCcccccccceecCCCCCCeeECCCCeEccCCCcEEeE
Confidence 211 112223578889999988888999999999999 6999999999999999999
Q ss_pred ccCCCCCCCCchHHHHHHHHHhhHHHHHHHH
Q 008163 535 GSTFYYSPGTNPQATVMMLGRYVNLTTSKYV 565 (575)
Q Consensus 535 aSv~P~~~~~NP~lTi~Ala~r~a~~i~~~~ 565 (575)
+||||+.+++||++|+||||||+||+|++++
T Consensus 513 aSv~P~~~~~np~~ti~aiAeraAd~I~~~~ 543 (546)
T 1kdg_A 513 AGIIPHLPTGNPQGTLMSAAEQAAAKILALA 543 (546)
T ss_dssp GGGCSSCCSSCSHHHHHHHHHHHHHHHHHST
T ss_pred ecccCCCCCccHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999998764
No 9
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=100.00 E-value=8.5e-58 Score=491.29 Aligned_cols=440 Identities=18% Similarity=0.211 Sum_probs=296.0
Q ss_pred CcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCCCC-CCCcccchhhh--hccCCCCCCCCCC--------------
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYG-NPNITNLGSFG--AALSDLSSTSPSQ-------------- 107 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~-------------- 107 (575)
.+||+||||+|.+|+++|.+|++ |.+|+|||+|..... .+....+.... ....+|.+.+.++
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~t~p~~~~~~l~~~~~~~~ 83 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWNQPGPDGNIFCGMLNPDKRSSWFKNRTEAPLGSFLWLDVVNRN 83 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCCCCCTTSSSSCCTTSCCGGGSBSCSBCCCCTTCHHHHGGGCCB
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCCCCCcccccccccccCcccccccccccccccccccccccccc
Confidence 47999999999999999999999 999999999986442 22222221111 1112455555443
Q ss_pred --ccc------CCCcccccCcceecchhhcccceecCCChhhhhc--CCCChhhhh-hhhhhhhhhcccCCCC-------
Q 008163 108 --RFI------SEDGVINSRARVLGGGSCLNAGFYTRAAPYYVRE--VGWDERLVN-ESYQWVEKVVAFEPPM------- 169 (575)
Q Consensus 108 --~~~------~~~~~~~~~g~~lGG~s~~~~~~~~r~~~~~~~~--~gw~~~~l~-~~~~~~~~~~~~~~~~------- 169 (575)
.+. .++.+.+++|++|||+|.+|++.+.|+.+.+++. .+|.+++++ |||+++|+.+...+..
T Consensus 84 ~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~Dfd~w~~~w~~~~l~~pyy~~~E~~~~~~~~~~~~~~~~ 163 (504)
T 1n4w_A 84 IDPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRSYFEEILPRVDSSEMYDRYFPRANSMLRVNHIDTKWFEDT 163 (504)
T ss_dssp CCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHCTTSCHHHHHHTHHHHHHHHHTCBCCCHHHHHHC
T ss_pred ccccccccceecCCceEEEEeeecchHHHhhCeEEEeCCHHHHHHhccccchhhhhhHHHHHHHHHhCCCCCCcccccCC
Confidence 222 4567788999999999999999999999977764 578899999 9999999987654321
Q ss_pred --chhHHHHHHHHHHcCCCC----CC-CCC------cCCCCcceee-ee-EECCCCccccHHH-hhhh-cCCCCeEEEcC
Q 008163 170 --RQWQSAVRDGLVEVGVLP----YN-GFT------YDHMYGTKIG-GT-IFDQNGQRHTAAD-LLEY-ANPSGLTLLLH 232 (575)
Q Consensus 170 --~~~~~~~~~~~~~~g~~~----~~-~~~------~~~~~~~~~~-~~-~~~~~g~r~~~~~-~l~~-~~~~g~~v~~~ 232 (575)
.+....+.+++++.|+++ .+ ++. ......|... .+ .-+.+| |+++.. |++. .++.|++|+++
T Consensus 164 ~~~p~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~g~~~~~~~~G~c~~g~~~g-r~s~~~~~l~~a~~~~n~~i~~~ 242 (504)
T 1n4w_A 164 EWYKFARVSREQAGKAGLGTVFVPNVYDFGYMQREAAGEVPKSALATEVIYGNNHG-KQSLDKTYLAAALGTGKVTIQTL 242 (504)
T ss_dssp GGGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTSSCCSGGGTCSTTCCSSS-BCCTTTTHHHHHHHTTSEEEEES
T ss_pred CcchHHHHHHHHHHHcCCCCccCCcccccCccccccCccccCCcccccccccCCCC-ccCHHHHHHHHHHhcCCcEEEeC
Confidence 234567788889999842 11 100 0000111110 00 012567 777544 7764 44567999999
Q ss_pred cEEEEEEEecCCCCCCeEEEEEEEeCCC---ceeEEeeecCCCcEEEEccCCcCcHHHHHhhc-CCCceeeecCCccCCC
Q 008163 233 ASVHKVLFRIKGKARPVAHGVVFRDATG---AKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG-AHNITVVLDQPLVGQG 308 (575)
Q Consensus 233 ~~V~~l~~~~~~~~~~~v~GV~~~~~~g---~~~~v~~~~~aa~~VVlAaG~~~sp~lLl~Sg-~~gi~~~~~~p~vG~~ 308 (575)
++|++|++++++ .+++||++.+.+| +..++. +++||||||+|+||+||++|| ..+|++. ++.||+|
T Consensus 243 ~~V~~i~~~~~g---~~~~gV~~~~~~g~~~~~~~v~-----A~~VIlaaG~~~s~~lL~~Sg~ig~i~~~--~~~VG~n 312 (504)
T 1n4w_A 243 HQVKTIRQTKDG---GYALTVEQKDTDGKLLATKEIS-----CRYLFLGAGSLGSTELLVRARDTGTLPNL--NSEVGAG 312 (504)
T ss_dssp EEEEEEEECTTS---SEEEEEEEECTTCCEEEEEEEE-----EEEEEECSHHHHHHHHHHHHHHTTSSTTC--CTTTTCC
T ss_pred CEEEEEEECCCC---CEEEEEEEeCCCCccceeEEEe-----eCEEEEccCCCCCHHHHHhccccCCCCCC--Chhhccc
Confidence 999999998531 2899999986556 445565 679999999999999999999 7778754 4589999
Q ss_pred CCCCCCceEEeeCCCcccchhhHhhcccccchhhhhccCCcccCCCCCCCCCCCcccccccccCCCCCCCCHHHHHHHHh
Q 008163 309 MSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIE 388 (575)
Q Consensus 309 l~dh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (575)
|+||+...+.+.... ... .+.+........+....+ ........ .. ..++.
T Consensus 313 l~dh~~~~~~~~~~~-~~~----------~~~~~~~~~~~~~~~~~~--~~~~~~~~---~~-~~~~~------------ 363 (504)
T 1n4w_A 313 WGPNGNIMTARANHM-WNP----------TGAHQSSIPALGIDAWDN--SDSSVFAE---IA-PMPAG------------ 363 (504)
T ss_dssp BBCTTCEEEEEECCT-TCC----------CCSCCCSSCCEEEEECCS--STTCEEEE---EE-CCCCS------------
T ss_pred cccCCcceeeeccCC-CCc----------ccCcCCCccEEEEeccCC--CCCceEEE---ec-cCChH------------
Confidence 999998766543211 000 000000000000000000 00000000 00 00000
Q ss_pred hhccCCCCCccceeEEeeecccCcceEEEccCCCCCCCCeeecCCCCCHHHHHHHHHHHH-HHHHHHhcccccccccccC
Q 008163 389 NMKALDDPAFRGGFILEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGIS-TIEKIIESKSFSKFKYESM 467 (575)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~p~s~g~v~l~~~d~~~~p~i~~~~~~~~~D~~~~~~~~~-~~~~i~~~~~~~~~~~~~~ 467 (575)
+. ..+.+...+.+|.|+|+|+|+++|+ .|+++|+.++ | +.+.++++ .++++++..+. + ...
T Consensus 364 ----~~----~~~~~~~~~~~p~srG~V~L~s~~~----~i~~~~~~~~-D-~~~~~~~~~~~~~i~~~~~~--~-~~~- 425 (504)
T 1n4w_A 364 ----LE----TWVSLYLAITKNPQRGTFVYDAATD----RAKLNWTRDQ-N-APAVNAAKALFDRINKANGT--I-YRY- 425 (504)
T ss_dssp ----SC----CCEEEEEEEECCCCCBCEEEETTTT----EEEECCCGGG-G-HHHHHHHHHHHHHHHHHHTC--C-BCC-
T ss_pred ----HH----hhhhhheeeeccCCCcEEEecCCCC----ceEeccCCCc-C-HHHHHHHHHHHHHHHhccCC--C-cCC-
Confidence 00 2234555677899999999988754 7999999999 8 77888888 88888877653 1 000
Q ss_pred cchhhhccccCCCCcCCCCCCCCHHHHHHHHHhcccccccccccccCCcccCCCCeEeccCCceeeeccCCCCCCCCchH
Q 008163 468 SVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQ 547 (575)
Q Consensus 468 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~H~~Gt~~MG~VVD~~~rv~g~~nL~V~DaSv~P~~~~~NP~ 547 (575)
+. ... +++++ ...+.+|++||||||+|||+++||||++||||||+||||+++++||+
T Consensus 426 -----------------~~--~~~-~~~~~---~~~~~~H~~GTcrMG~VVD~~~rV~Gv~nLrVvDaSv~P~~~~~np~ 482 (504)
T 1n4w_A 426 -----------------DL--FGT-QLKAF---ADDFCYHPLGGCVLGKATDDYGRVAGYKNLYVTDGSLIPGSVGVNPF 482 (504)
T ss_dssp -----------------SS--SSS-SCCSE---ECSEESSCBCSSCTTTTBCTTSBBTTCSSEEECSGGGSCSCCSSCSH
T ss_pred -----------------ch--hhh-hhhhh---ccCccccccCCceeeeEECCCCeEeccCCeEEeeccccCCCCCcChH
Confidence 00 000 00000 35688999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhHHHHHHHHH
Q 008163 548 ATVMMLGRYVNLTTSKYVS 566 (575)
Q Consensus 548 lTi~Ala~r~a~~i~~~~~ 566 (575)
+|+||||+|+||+|+++..
T Consensus 483 ~ti~aiAeraAd~I~~~~~ 501 (504)
T 1n4w_A 483 VTITALAERNVERIIKQDV 501 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhhc
Confidence 9999999999999998764
No 10
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=100.00 E-value=8.7e-57 Score=483.45 Aligned_cols=435 Identities=17% Similarity=0.134 Sum_probs=291.3
Q ss_pred CCCCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCCCCCCCcccchhhhhc-----cCCCCCCCCCC---------
Q 008163 43 QPVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYGNPNITNLGSFGAA-----LSDLSSTSPSQ--------- 107 (575)
Q Consensus 43 ~~~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~--------- 107 (575)
....+||+||||+|.+|+++|.+|++ |.+|+|||+|..... .......+... ..+|.+.+.++
T Consensus 7 ~~~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~~--~~p~~~~~~~~~~~~~~~~w~~~~~pq~~~~~~~~~ 84 (507)
T 1coy_A 7 ADGDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSWDT--PGSDGKIFCGMLNPDKRSMWLADKTDQPVSNFMGFG 84 (507)
T ss_dssp CTTCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCSCS--CCTTSCSSCCSSSCCTTSBBSCSBCCCSSCSBTTBS
T ss_pred CcCCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCC--CCCccccccccccccccccccccccccccccccccc
Confidence 34568999999999999999999999 999999999975421 01000111111 12455555443
Q ss_pred ------ccc------CCCcccccCcceecchhhcccceecCCChhhhhc--CCCChhhhh-hhhhhhhhhcccCCCC---
Q 008163 108 ------RFI------SEDGVINSRARVLGGGSCLNAGFYTRAAPYYVRE--VGWDERLVN-ESYQWVEKVVAFEPPM--- 169 (575)
Q Consensus 108 ------~~~------~~~~~~~~~g~~lGG~s~~~~~~~~r~~~~~~~~--~gw~~~~l~-~~~~~~~~~~~~~~~~--- 169 (575)
.+. .++.+.+++|++|||+|.+|++.+.|+.+.+++. .+|.++++. |||+++|+.+...+..
T Consensus 85 ~~~~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~dfd~w~~~w~~~~l~~pyy~~~E~~~~~~~~~~~~ 164 (507)
T 1coy_A 85 INKSIDRYVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAVTPKRNYFEEILPSVDSNEMYNKYFPRANTGLGVNNIDQAW 164 (507)
T ss_dssp CCCBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHCTTSCHHHHHHTHHHHHHHHHTCBCCCHHH
T ss_pred cccccccccceeeEecCCCeEEEEecccchHHHhhCeEEeeCCHHHHHhhCCccchhcchhHHHHHHHHHhCCCCCCCcc
Confidence 333 4567788999999999999999999999977664 468899999 9999999987654322
Q ss_pred ------chhHHHHHHHHHHcCCCC----CC-CCC---------cCCCCcceeeeeEECCCCccccHHH-hhh-hcCCCCe
Q 008163 170 ------RQWQSAVRDGLVEVGVLP----YN-GFT---------YDHMYGTKIGGTIFDQNGQRHTAAD-LLE-YANPSGL 227 (575)
Q Consensus 170 ------~~~~~~~~~~~~~~g~~~----~~-~~~---------~~~~~~~~~~~~~~~~~g~r~~~~~-~l~-~~~~~g~ 227 (575)
.+....+.++++++|+++ .+ .+. ......|..+... +.+| |+++.. |+. +.++.|+
T Consensus 165 ~~~~~~~~~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~~~~~~~~~~g~C~~g-c~~g-R~s~~~~~l~~a~~~~n~ 242 (507)
T 1coy_A 165 FESTEWYKFARTGRKTAQRSGFTTAFVPNVYDFEYMKKEAAGQVTKSGLGGEVIYG-NNAG-KKSLDKTYLAQAAATGKL 242 (507)
T ss_dssp HHHCGGGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTCSCCSTTTTCSTTC-CSSS-BCCTTTTHHHHHHHTTCE
T ss_pred ccccccchHHHHHHHHHHHcCCCCccCCcccccCcccccCCCcccCcccccccccc-CCCC-CcChHHHHHHHHHhcCCc
Confidence 234566888889999831 11 110 0000011111000 2567 777544 776 4456689
Q ss_pred EEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCc---eeEEeeecCCCcEEEEccCCcCcHHHHHhhc-CCCceeeecCC
Q 008163 228 TLLLHASVHKVLFRIKGKARPVAHGVVFRDATGA---KHRAYLKNGPKNEIIVSAGALGSPQLLMLSG-AHNITVVLDQP 303 (575)
Q Consensus 228 ~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~---~~~v~~~~~aa~~VVlAaG~~~sp~lLl~Sg-~~gi~~~~~~p 303 (575)
+|+++++|++|++++++ .+++||++.+.+|+ .++++ +++||||||+|+||+||++|| .-++| +.++
T Consensus 243 ~i~~~~~v~~i~~~~~g---~~~~gV~~~~~~g~~~~~~~~~-----A~~VIlaaGa~~sp~lL~~Sg~iG~lp--nl~d 312 (507)
T 1coy_A 243 TITTLHRVTKVAPATGS---GYSVTMEQIDEQGNVVATKVVT-----ADRVFFAAGSVGTSKLLVSMKAQGHLP--NLSS 312 (507)
T ss_dssp EEECSEEEEEEEECSSS---SEEEEEEEECTTSCEEEEEEEE-----EEEEEECSHHHHHHHHHHHHHHTTSST--TSCT
T ss_pred EEEeCCEEEEEEECCCC---CEEEEEEEeCCCCcccccEEEE-----eCEEEEccCccCCHHHHHhcccCCCCC--ccCh
Confidence 99999999999998631 27999999864563 45565 679999999999999999999 54455 4456
Q ss_pred ccCCCCCCCCCceEEee-CCCcccchhhHhhcccccchhhhh--ccCC-cccCCCCCCCCCCCcccccccccCCCCCCCC
Q 008163 304 LVGQGMSDNPMNAIFVP-SPVPVEVSLIQVVGITQFGSYIEA--ASGE-NFAGGSPSPRDYGMFSPKIGQLSKVPPKQRT 379 (575)
Q Consensus 304 ~vG~~l~dh~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (575)
.||+||+||+...+... ..... .+.+... ..+. .+. + .....+. +...
T Consensus 313 ~VG~~l~~h~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~---~--~~~~~~~-----~~~~------ 364 (507)
T 1coy_A 313 QVGEGWGNNGNIMVGRANHMWDA------------TGSKQATIPTMGIDNWA---D--PTAPIFA-----EIAP------ 364 (507)
T ss_dssp TTTCCBBCTTEEEEEEECCTTSC------------CCSCCCSSCCEEEECTT---C--TTSCEEE-----EEEC------
T ss_pred hhCCccccCCccccccccccccc------------ccccCCCcceEEEeccC---C--CCCCcEE-----Eecc------
Confidence 89999999986443211 10000 0000000 0000 000 0 0000000 0000
Q ss_pred HHHHHHHHhhhccCCCCCccceeEEeeecccCcceEEEccCCCCCCCCeeecCCCCCHHHHHHHHHHHH-HHHHHHhccc
Q 008163 380 PEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGIS-TIEKIIESKS 458 (575)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~g~v~l~~~d~~~~p~i~~~~~~~~~D~~~~~~~~~-~~~~i~~~~~ 458 (575)
++............+.+|.|+|+|+|+++|+ .|+++|+.++ |. .+.++++ .+++++++.+
T Consensus 365 -------------~~~~~~~~~~~~~~~~~p~s~G~V~L~s~~~----~i~~~~~~~~-D~-~~~~~~~~~~~~i~~~~~ 425 (507)
T 1coy_A 365 -------------LPAGLETYVSLYLAITKNPERARFQFNSGTG----KVDLTWAQSQ-NQ-KGIDMAKKVFDKINQKEG 425 (507)
T ss_dssp -------------CCCSSCCCEEEEEEEECCCCCBCEEEETTTT----EEEECCCGGG-GH-HHHHHHHHHHHHHHHHHT
T ss_pred -------------CCHHHhhheeeeEEEeeeCCCcEEEEccCCC----ceeeccCCCC-cH-HHHHHHHHHHHHHHhhcC
Confidence 0000002234445667899999999988654 8999999999 84 5666666 8899998765
Q ss_pred ccccccccCcchhhhccccCCCCcCCCCCCCCHHHHHHHHHhcccccccccccccCCcccCCCCeEeccCCceeeeccCC
Q 008163 459 FSKFKYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGSTF 538 (575)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~H~~Gt~~MG~VVD~~~rv~g~~nL~V~DaSv~ 538 (575)
. +...+ . .++++ ++| ...+.+|++||||||+|||+++||||++||||||+|||
T Consensus 426 ~--~~~~~----------------~----~~~d~--~~~---~~~~~~H~~GTcrMG~VVD~~~rV~Gv~nLrVvDaSv~ 478 (507)
T 1coy_A 426 T--IYRTD----------------L----FGVYY--KTW---GDDFTYHPLGGVLLNKATDNFGRLPEYPGLYVVDGSLV 478 (507)
T ss_dssp C--CBCSS----------------C----C--CC--CSS---BCSEESCCBCSSCTTTTSCTTSBCTTSTTEEECSGGGS
T ss_pred C--cccCc----------------c----cccch--hhh---cccccccccCCcchhheECCCCeEeccCCeEEeechhc
Confidence 2 21111 0 01111 122 45688999999999999999999999999999999999
Q ss_pred CCCCCCchHHHHHHHHHhhHHHHHHHH
Q 008163 539 YYSPGTNPQATVMMLGRYVNLTTSKYV 565 (575)
Q Consensus 539 P~~~~~NP~lTi~Ala~r~a~~i~~~~ 565 (575)
|+++++||++||||||+|+||+|+++.
T Consensus 479 P~~~~~Np~~ti~alAeraAd~I~~~~ 505 (507)
T 1coy_A 479 PGNVGVNPFVTITALAERNMDKIISSD 505 (507)
T ss_dssp CSCCSSCSHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCcChHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999998764
No 11
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=100.00 E-value=6.5e-45 Score=398.71 Aligned_cols=455 Identities=16% Similarity=0.139 Sum_probs=271.4
Q ss_pred CCCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCCCCCCCccc----c------hhhhhc-----cC-C--CC---
Q 008163 44 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYGNPNITN----L------GSFGAA-----LS-D--LS--- 101 (575)
Q Consensus 44 ~~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~~~~~~~~~----~------~~~~~~-----~~-~--~~--- 101 (575)
|+..|||||||+|++|+++|..|++ |++|+|||++....+...... . ..+... .. + ..
T Consensus 43 ~~~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~l~~~~ 122 (623)
T 3pl8_A 43 MDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLKIGAHKKNTVEYQKNIDKFVNVIQGQLMSVSVPVNTLV 122 (623)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSSTTCCTTCSHHHHHSGGGTHHHHHHTCEESCCCCCCCC
T ss_pred ccccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcccccccccccCCCccHHHHHHHHHHhhhhccccccccc
Confidence 4467999999999999999999999 999999999986553110000 0 000000 00 0 00
Q ss_pred -------CCCCCCcccCC------Cccc----ccCcceecchhhcccceecCCChhhh--hcCCC---Chhhhhhhhhhh
Q 008163 102 -------STSPSQRFISE------DGVI----NSRARVLGGGSCLNAGFYTRAAPYYV--REVGW---DERLVNESYQWV 159 (575)
Q Consensus 102 -------~~~~~~~~~~~------~~~~----~~~g~~lGG~s~~~~~~~~r~~~~~~--~~~gw---~~~~l~~~~~~~ 159 (575)
........+.. ..+. ...+..+||.+.+|.+...|..+... ....| .++++.++|+..
T Consensus 123 ~~~~~~~~~~~~~v~l~~g~~~~~~~~~~l~~~~~~~~vGG~~~~~~g~~~r~~~~e~~~~l~~~~v~~~~~l~~~~~~~ 202 (623)
T 3pl8_A 123 VDTLSPTSWQASTFFVRNGSNPEQDPLRNLSGQAVTRVVGGMSTAWTCATPRFDREQRPLLVKDDADADDAEWDRLYTKA 202 (623)
T ss_dssp CCCSCTTSCCCSSCCSCTTCCTTCCTTSCCTTCEECCSTTGGGGTCCCBCCCCCGGGSCCSSTTCHHHHHHHHHHHHHHH
T ss_pred cccccccccccCcEEeccCCCcccccchhhhhhcccccccCcceeeccccccCChHHhhhhhcccCccChhhHHHHHHHH
Confidence 00000000000 0011 12456789999999988887765310 00122 235677777777
Q ss_pred hhhcccCCCC--chhH-HHHHHHHHHcCCCCCCCCCcCCCCcceeeeeEECCCCccccH-HHhhh-h------cCCCCeE
Q 008163 160 EKVVAFEPPM--RQWQ-SAVRDGLVEVGVLPYNGFTYDHMYGTKIGGTIFDQNGQRHTA-ADLLE-Y------ANPSGLT 228 (575)
Q Consensus 160 ~~~~~~~~~~--~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~-~~~l~-~------~~~~g~~ 228 (575)
+..+...... .... ......+........ . ... .............|+++ ..++. . .++.|++
T Consensus 203 ~~l~~vgg~~~~~~~~~~~~~~~l~~~~~~~~-~--~~~---~p~a~~~~~~~~~r~s~~~~~l~~~~~l~~~~~~~nv~ 276 (623)
T 3pl8_A 203 ESYFQTGTDQFKESIRHNLVLNKLTEEYKGQR-D--FQQ---IPLAATRRSPTFVEWSSANTVFDLQNRPNTDAPEERFN 276 (623)
T ss_dssp HHHHTEESCTTTTCHHHHHHHHHHHHHTTTTS-C--CEE---CCEEEEEEETTEEEECCHHHHCCCCCEEETTEEEEEEE
T ss_pred HHhcccccccccCccccccchHHHHHhhhhcc-c--ccc---cchhhccCCCCccccchHHhhhhhhhcchhhccCCCEE
Confidence 6654432211 1111 111122222111000 0 000 00000111112223333 33554 2 3456999
Q ss_pred EEcCcEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEeeecCCCcEEEEccCCcCcHHHHHhhc--------CCCceee
Q 008163 229 LLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVV 299 (575)
Q Consensus 229 v~~~~~V~~l~~~~~~~~~~~v~GV~~~~-~~g~~~~v~~~~~aa~~VVlAaG~~~sp~lLl~Sg--------~~gi~~~ 299 (575)
|++++.|++|+.++++ .+++||++.+ .+|+.+++. +++||||+|++.+|++|+.|| .+||++
T Consensus 277 v~~~~~V~~i~~~~~~---~~v~GV~~~~~~~g~~~~i~-----A~~VIlaaG~~~s~~lL~~sgiG~~~~l~~~~i~~- 347 (623)
T 3pl8_A 277 LFPAVACERVVRNALN---SEIESLHIHDLISGDRFEIK-----ADVYVLTAGAVHNTQLLVNSGFGQLGRPNPANPPE- 347 (623)
T ss_dssp EECSEEEEEEEECTTS---SCEEEEEEEETTTCCEEEEC-----EEEEEECSCTTHHHHHHHTTTSSCCSSCCTTSCCS-
T ss_pred EEeCCEEEEEEEECCC---CEEEEEEEEEcCCCcEEEEE-----CCEEEEcCCCcCCHHHHHhcCCCccccccccCCCC-
Confidence 9999999999997532 2899999987 467766664 789999999999999999998 677777
Q ss_pred ecCCccCCCCCCCCCceEEeeCCCcccchhhHhhcccccchhhhhccCCcccCCCCCCCCCCCcccccccccCCCCCCCC
Q 008163 300 LDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRT 379 (575)
Q Consensus 300 ~~~p~vG~~l~dh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (575)
++|.||+||+||+...+.+.++.+....+.+.+.... |. .|..+. ..+.+. -+-....
T Consensus 348 -~l~~vG~nl~dh~~~~~~~~~~~~~~~~~~~~~~~~g---~~---g~~~~~------------~~~~~~---~p~~~~~ 405 (623)
T 3pl8_A 348 -LLPSLGSYITEQSLVFCQTVMSTELIDSVKSDMTIRG---TP---GELTYS------------VTYTPG---ASTNKHP 405 (623)
T ss_dssp -SCTTTTBSCBCCCEEEEEEEECHHHHHHHTTTCEEES---CT---TSTTCE------------EECCTT---CTTCSSC
T ss_pred -CCcccccchhhCcCceEEEEECCcccccccccccccc---cC---CCccee------------cccccC---cccccCC
Confidence 8999999999999999888876542111111000000 00 000000 000000 0000000
Q ss_pred HH---HHHHHHhhh-------------------------------c------cC----CCC-CccceeEEeeecccCcce
Q 008163 380 PE---AIAEAIENM-------------------------------K------AL----DDP-AFRGGFILEKVMGPVSTG 414 (575)
Q Consensus 380 ~~---~~~~~~~~~-------------------------------~------~~----~~~-~~~~~~~~~~~~~p~s~g 414 (575)
+. .++..+... . .+ ... ......+. ...|.++|
T Consensus 406 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--e~~p~~~n 483 (623)
T 3pl8_A 406 DWWNEKVKNHMMQHQEDPLPIPFEDPEPQVTTLFQPSHPWHTQIHRDAFSYGAVQQSIDSRLIVDWRFFG--RTEPKEEN 483 (623)
T ss_dssp HHHHHHHHHHHHHCTTCCCSSCTTCCCCEEECCCBTTBCEEEEEECCSCCCSCCCCSSCGGGEEEEEEEE--CCCCCTTC
T ss_pred chhhhhhhhhhhcccccccccccccccccccccccccCcchhhhhhhhccccccccccccceEEEEEEEE--eeccCCCC
Confidence 00 000000000 0 00 000 00111233 34578899
Q ss_pred EEEccC--CCCCCCCeeecCCCCCHH-HHHHHHHHHHHHHHHHhcccccccccccCcchhhhccccCCCCcCCCCCCCCH
Q 008163 415 HLELRT--RNPNDNPSVTFNYFKEPE-DLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLLPRHSNAS 491 (575)
Q Consensus 415 ~v~l~~--~d~~~~p~i~~~~~~~~~-D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 491 (575)
+|+|++ +|+++.|+++++|..++. |+++++++++.+.++++.++....... +
T Consensus 484 ~v~L~~~~~D~~g~P~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~~-------------------~------ 538 (623)
T 3pl8_A 484 KLWFSDKITDAYNMPQPTFDFRFPAGRTSKEAEDMMTDMCVMSAKIGGFLPGSL-------------------P------ 538 (623)
T ss_dssp EEEEEEEEECTTSSEEEEEECCCCTTHHHHHHHHHHHHHHHHHTTTEEECTTSC-------------------S------
T ss_pred EEEECCCCcCCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHhcCCcccCch-------------------h------
Confidence 999986 899999999999999999 999999999999999988664321100 0
Q ss_pred HHHHHHHHhcccccccccccccCC------ccc-CCCCeEeccCCceeeeccCCCCCCCCchHHHHHHHHHhhHHHHHHH
Q 008163 492 TSLEQFCRDTVMTIWHYHGGCQVG------KVV-DHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYVNLTTSKY 564 (575)
Q Consensus 492 ~~~~~~~~~~~~~~~H~~Gt~~MG------~VV-D~~~rv~g~~nL~V~DaSv~P~~~~~NP~lTi~Ala~r~a~~i~~~ 564 (575)
++ ....+++|++|||||| +|| |+++||||++||||+|+||||+.+++||++||||||+|+|++|+++
T Consensus 539 -~~-----~~~~~~~H~~gt~~mg~~~~~~~vvvd~~~~~~~~~~l~v~d~s~~p~~~~~np~~t~~a~a~r~a~~i~~~ 612 (623)
T 3pl8_A 539 -QF-----MEPGLVLHLGGTHRMGFDEKEDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCEYIKQN 612 (623)
T ss_dssp -EE-----CCTTTTCCCBCTTCBCSSTTTTTCSBCTTCBBTTCSSEEECSGGGCCSCCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred -hc-----cCCCCcccCCCceeCCCCCCCCeeEECCCCCEecCCCeEEecCCccCCCCCcChHHHHHHHHHHHHHHHHHH
Confidence 00 0135789999999999 486 9999999999999999999999999999999999999999999999
Q ss_pred HHHH
Q 008163 565 VSKI 568 (575)
Q Consensus 565 ~~~~ 568 (575)
+++.
T Consensus 613 ~~~~ 616 (623)
T 3pl8_A 613 FTPS 616 (623)
T ss_dssp CCCC
T ss_pred hhcC
Confidence 8654
No 12
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.59 E-value=1.3e-14 Score=155.83 Aligned_cols=62 Identities=16% Similarity=0.290 Sum_probs=48.7
Q ss_pred hhhhcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEeeecCCC-cEEEEccCCcCc-HHHHH
Q 008163 218 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPK-NEIIVSAGALGS-PQLLM 289 (575)
Q Consensus 218 ~l~~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa-~~VVlAaG~~~s-p~lLl 289 (575)
++..+++.|++|+++++|++|+.++++ +|+||++.+ +++.+++. + |.||||+|++.. +.++.
T Consensus 208 L~~~~~~~Gv~i~~~t~v~~L~~~~~g----~v~GV~~~~-~g~~~~i~-----A~k~VVlAtGG~~~n~~m~~ 271 (510)
T 4at0_A 208 LVETAEKLGVRAEYDMRVQTLVTDDTG----RVVGIVAKQ-YGKEVAVR-----ARRGVVLATGSFAYNDKMIE 271 (510)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEECTTC----CEEEEEEEE-TTEEEEEE-----EEEEEEECCCCCTTCHHHHH
T ss_pred HHHHHHHcCCEEEecCEeEEEEECCCC----cEEEEEEEE-CCcEEEEE-----eCCeEEEeCCChhhCHHHHH
Confidence 555666679999999999999998443 999999986 56566665 6 699999999984 44443
No 13
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.49 E-value=1.7e-13 Score=149.11 Aligned_cols=189 Identities=15% Similarity=0.175 Sum_probs=107.3
Q ss_pred CCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCCCCCCCcccchhhhhccCCCCCCCCCCcccCCCcccccCccee
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYGNPNITNLGSFGAALSDLSSTSPSQRFISEDGVINSRARVL 123 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l 123 (575)
..+|||||||+|++|+++|+.|++ |++|+||||++...
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~g----------------------------------------- 157 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSG----------------------------------------- 157 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSC-----------------------------------------
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCC-----------------------------------------
Confidence 457999999999999999999999 99999999996532
Q ss_pred cchhhcccceecCCChhhhhcCCCChhhhhhhhhhhhhhcccCCCCc------hhHHHHHHHHHHcCCCCCCCCCcCCCC
Q 008163 124 GGGSCLNAGFYTRAAPYYVREVGWDERLVNESYQWVEKVVAFEPPMR------QWQSAVRDGLVEVGVLPYNGFTYDHMY 197 (575)
Q Consensus 124 GG~s~~~~~~~~r~~~~~~~~~gw~~~~l~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~ 197 (575)
|.+...++..........+..+.. +..+.++....+......... .......+++.+.|++. ... ....
T Consensus 158 -g~s~~s~gg~~~~~~~~~~~~g~~-ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~Gv~~-~~~--~~~~ 232 (566)
T 1qo8_A 158 -GNSMISAGGMNAVGTKQQTAHGVE-DKVEWFIEDAMKGGRQQNDIKLVTILAEQSADGVQWLESLGANL-DDL--KRSG 232 (566)
T ss_dssp -TTGGGCCSCEECSSCHHHHHTTCC-CCHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCC-CEE--ECCT
T ss_pred -CcccccCceeEccCCHHHHHhCCC-CCHHHHHHHHHHhcCCCCCHHHHHHHHhccHHHHHHHHhcCCcc-ccc--cccC
Confidence 333333332222211111111111 122223322222111110000 01123456667777652 100 0111
Q ss_pred cceeeeeEECCCCcccc--H-HHhhhhcCCCCeEEEcCcEEEEEEEec-CCCCCCeEEEEEEEeCCCceeEEeeecCCCc
Q 008163 198 GTKIGGTIFDQNGQRHT--A-ADLLEYANPSGLTLLLHASVHKVLFRI-KGKARPVAHGVVFRDATGAKHRAYLKNGPKN 273 (575)
Q Consensus 198 ~~~~~~~~~~~~g~r~~--~-~~~l~~~~~~g~~v~~~~~V~~l~~~~-~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~ 273 (575)
+........+.++.... . ..+...+++.|++|+++++|++|+.++ + +++||++.+.+|+..++. ++
T Consensus 233 g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g-----~v~Gv~~~~~~g~~~~i~-----A~ 302 (566)
T 1qo8_A 233 GARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDH-----SVVGAVVHGKHTGYYMIG-----AK 302 (566)
T ss_dssp TCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEECTTS-----BEEEEEEEETTTEEEEEE-----EE
T ss_pred CCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCC-----cEEEEEEEeCCCcEEEEE-----cC
Confidence 11111122222221111 1 124455666799999999999999987 5 899999986567665665 69
Q ss_pred EEEEccCCcCcHHHHH
Q 008163 274 EIIVSAGALGSPQLLM 289 (575)
Q Consensus 274 ~VVlAaG~~~sp~lLl 289 (575)
.||||+|++...+-|+
T Consensus 303 ~VVlAtGg~s~~~~~~ 318 (566)
T 1qo8_A 303 SVVLATGGYGMNKEMI 318 (566)
T ss_dssp EEEECCCCCTTCHHHH
T ss_pred EEEEecCCcccCHHHH
Confidence 9999999998754443
No 14
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.49 E-value=2.4e-13 Score=147.99 Aligned_cols=189 Identities=17% Similarity=0.134 Sum_probs=105.1
Q ss_pred CCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCCCCCCCcccchhhhhccCCCCCCCCCCcccCCCcccccCccee
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYGNPNITNLGSFGAALSDLSSTSPSQRFISEDGVINSRARVL 123 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l 123 (575)
..++||||||+|++|+++|+.|++ |++|+||||.+...
T Consensus 124 ~~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~g----------------------------------------- 162 (571)
T 1y0p_A 124 HDTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIG----------------------------------------- 162 (571)
T ss_dssp SEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC-----------------------------------------
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCC-----------------------------------------
Confidence 347999999999999999999999 99999999997543
Q ss_pred cchhhcccceecCCChhhhhcCCCChhhhhhhhhhhhhhcccCCCCc---h---hHHHHHHHHHHcCCCCCCCCCcCCCC
Q 008163 124 GGGSCLNAGFYTRAAPYYVREVGWDERLVNESYQWVEKVVAFEPPMR---Q---WQSAVRDGLVEVGVLPYNGFTYDHMY 197 (575)
Q Consensus 124 GG~s~~~~~~~~r~~~~~~~~~gw~~~~l~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~g~~~~~~~~~~~~~ 197 (575)
|.+...++..........+..+.. +..+.++....+.-....... . ......+++.+.|++.. .. ....
T Consensus 163 -g~s~~a~gg~~~~~~~~~~~~g~~-ds~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~-~~--~~~~ 237 (571)
T 1y0p_A 163 -GNAKLAAGGMNAAWTDQQKAKKIT-DSPELMFEDTMKGGQNINDPALVKVLSSHSKDSVDWMTAMGADLT-DV--GMMG 237 (571)
T ss_dssp -TTGGGCCSCEECSSCHHHHHTTCC-CCHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCC-EE--ECCT
T ss_pred -CchhhcCceEEeCCCHHHHHhCCC-CCHHHHHHHHHHhcCCCCCHHHHHHHHHccHHHHHHHHhcCCCCc-cC--cccC
Confidence 333222222211111111111211 112222222211100000000 0 11234566677776521 10 0111
Q ss_pred cceeeeeEECCCCccccH--HH-hhhhcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcE
Q 008163 198 GTKIGGTIFDQNGQRHTA--AD-LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNE 274 (575)
Q Consensus 198 ~~~~~~~~~~~~g~r~~~--~~-~l~~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~ 274 (575)
+........+.+|..... .. +...+++.|++|+++++|++|+.++++ +++||.+.+.+|+..++. ++.
T Consensus 238 g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g----~v~Gv~~~~~~g~~~~i~-----a~~ 308 (571)
T 1y0p_A 238 GASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKG----TVKGILVKGMYKGYYWVK-----ADA 308 (571)
T ss_dssp TCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEECTTS----CEEEEEEEETTTEEEEEE-----CSE
T ss_pred CcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCC----eEEEEEEEeCCCcEEEEE-----CCe
Confidence 111122222222222111 12 445566679999999999999988733 899999986567665665 688
Q ss_pred EEEccCCcCcHHHH
Q 008163 275 IIVSAGALGSPQLL 288 (575)
Q Consensus 275 VVlAaG~~~sp~lL 288 (575)
||||+|++...+-|
T Consensus 309 VVlAtGg~~~n~~~ 322 (571)
T 1y0p_A 309 VILATGGFAKNNER 322 (571)
T ss_dssp EEECCCCCTTCHHH
T ss_pred EEEeCCCcccCHHH
Confidence 99999999765433
No 15
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.39 E-value=3.9e-12 Score=138.23 Aligned_cols=62 Identities=16% Similarity=0.246 Sum_probs=48.7
Q ss_pred hhhhcCCCCeEEEcCcEEEEEEEec-CCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCCcCc-HHHHH
Q 008163 218 LLEYANPSGLTLLLHASVHKVLFRI-KGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGS-PQLLM 289 (575)
Q Consensus 218 ~l~~~~~~g~~v~~~~~V~~l~~~~-~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~~~s-p~lLl 289 (575)
+...+++.|++|+++++|++|+.++ + +++||++.+.+|+..++. ++.||||+|++.. +.++.
T Consensus 261 L~~~~~~~gv~i~~~t~v~~l~~~~~g-----~v~GV~~~~~~G~~~~i~-----A~~VVlAtGg~~~~~~~~~ 324 (572)
T 1d4d_A 261 LWDNAVKRGTDIRLNSRVVRILEDASG-----KVTGVLVKGEYTGYYVIK-----ADAVVIAAGGFAKNNERVS 324 (572)
T ss_dssp HHHHHHHTTCEEESSEEEEEEEEC--C-----CEEEEEEEETTTEEEEEE-----CSEEEECCCCCTTCHHHHH
T ss_pred HHHHHHHcCCeEEecCEEEEEEECCCC-----eEEEEEEEeCCCcEEEEE-----cCEEEEeCCCCccCHHHHH
Confidence 4456666799999999999999887 5 899999986567666665 6999999999985 44443
No 16
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.37 E-value=4e-12 Score=139.49 Aligned_cols=57 Identities=16% Similarity=0.216 Sum_probs=46.3
Q ss_pred hhhhcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEeeecCCCcEEEEccCCcCc
Q 008163 218 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGS 284 (575)
Q Consensus 218 ~l~~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~-~~g~~~~v~~~~~aa~~VVlAaG~~~s 284 (575)
+...+.+.|++|++++.|++|+.+++ +++||.+.+ .+|+.+.+. ++.||||+|+++.
T Consensus 164 L~~~a~~~gv~i~~~~~v~~L~~~~g-----~v~Gv~~~~~~~G~~~~i~-----A~~VVlATGG~~~ 221 (660)
T 2bs2_A 164 VANECLKLGVSIQDRKEAIALIHQDG-----KCYGAVVRDLVTGDIIAYV-----AKGTLIATGGYGR 221 (660)
T ss_dssp HHHHHHHHTCEEECSEEEEEEEEETT-----EEEEEEEEETTTCCEEEEE-----CSEEEECCCCCGG
T ss_pred HHHHHHhCCCEEEECcEEEEEEecCC-----EEEEEEEEECCCCcEEEEE-----cCEEEEccCcchh
Confidence 44455567999999999999998766 999999875 467666665 7899999999874
No 17
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.36 E-value=4.4e-12 Score=138.21 Aligned_cols=57 Identities=16% Similarity=0.219 Sum_probs=47.4
Q ss_pred hhhhcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEeeecCCCcEEEEccCCcCc
Q 008163 218 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGS 284 (575)
Q Consensus 218 ~l~~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~-~~g~~~~v~~~~~aa~~VVlAaG~~~s 284 (575)
+...+.+.|++|++++.|++|+.+++ +++||.+.+ .+|+.+.+. ++.||||+|+++.
T Consensus 161 L~~~~~~~gv~i~~~~~v~~Li~~~g-----~v~Gv~~~~~~~G~~~~i~-----A~~VVlATGG~~~ 218 (621)
T 2h88_A 161 LYGRSLRYDTSYFVEYFALDLLMENG-----ECRGVIALCIEDGTIHRFR-----AKNTVIATGGYGR 218 (621)
T ss_dssp HHHHHTTSCCEEEETEEEEEEEEETT-----EEEEEEEEETTTCCEEEEE-----EEEEEECCCCCGG
T ss_pred HHHHHHhCCCEEEEceEEEEEEEECC-----EEEEEEEEEcCCCcEEEEE-----cCeEEECCCcccc
Confidence 44566778999999999999999866 999999876 467766665 7999999999874
No 18
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.31 E-value=9.9e-12 Score=135.19 Aligned_cols=58 Identities=14% Similarity=0.102 Sum_probs=45.8
Q ss_pred hhhhcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEeeecCCCcEEEEccCCcCc
Q 008163 218 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGS 284 (575)
Q Consensus 218 ~l~~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~-~~g~~~~v~~~~~aa~~VVlAaG~~~s 284 (575)
+...+++.|++|++++.|++|+.++++ +++||.+.+ .+|+.+++. ++.||||+|+++.
T Consensus 149 L~~~~~~~gv~i~~~~~v~~L~~~~~g----~v~Gv~~~~~~~g~~~~i~-----A~~VVlAtGg~~~ 207 (588)
T 2wdq_A 149 LYQQNLKNHTTIFSEWYALDLVKNQDG----AVVGCTALCIETGEVVYFK-----ARATVLATGGAGR 207 (588)
T ss_dssp HHHHHHHTTCEEEETEEEEEEEECTTS----CEEEEEEEETTTCCEEEEE-----EEEEEECCCCCGG
T ss_pred HHHHHHhCCCEEEeCcEEEEEEECCCC----EEEEEEEEEcCCCeEEEEE-----cCEEEECCCCCcc
Confidence 444555679999999999999997333 899999875 467666665 7999999999764
No 19
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.28 E-value=1.8e-11 Score=131.83 Aligned_cols=62 Identities=10% Similarity=0.118 Sum_probs=44.4
Q ss_pred hhhhcCC-CCeEEEcCcEEEEEEEecCC--CCCCeEEEEEEEe-CCCceeEEeeecCCCcEEEEccCCcCc
Q 008163 218 LLEYANP-SGLTLLLHASVHKVLFRIKG--KARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGS 284 (575)
Q Consensus 218 ~l~~~~~-~g~~v~~~~~V~~l~~~~~~--~~~~~v~GV~~~~-~~g~~~~v~~~~~aa~~VVlAaG~~~s 284 (575)
++..+++ .|++|++++.|++|+.++++ ....+++||.+.+ .+|+.+++. ++.||||+|++..
T Consensus 144 L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~-----A~~VVlAtGg~~~ 209 (540)
T 1chu_A 144 LVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCH-----AKAVVLATGGASK 209 (540)
T ss_dssp CHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEE-----CSEEEECCCCCGG
T ss_pred HHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEE-----cCeEEECCCCccc
Confidence 4444444 79999999999999984321 0011789999886 356655665 7999999999764
No 20
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.27 E-value=5.2e-12 Score=129.37 Aligned_cols=61 Identities=18% Similarity=0.142 Sum_probs=45.3
Q ss_pred hhhhcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCCcCcHHHHHhh
Q 008163 218 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLS 291 (575)
Q Consensus 218 ~l~~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~~~sp~lLl~S 291 (575)
+...+++.|++++++++|++|..+++ .+..|.. .+|+..++. ++.||+|+|+ ++++|+...
T Consensus 156 l~~~~~~~Gv~i~~~~~v~~i~~~~~-----~~~~v~~--~~g~~~~~~-----a~~VV~A~G~-~s~~l~~~~ 216 (369)
T 3dme_A 156 YQGDAESDGAQLVFHTPLIAGRVRPE-----GGFELDF--GGAEPMTLS-----CRVLINAAGL-HAPGLARRI 216 (369)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEECTT-----SSEEEEE--CTTSCEEEE-----EEEEEECCGG-GHHHHHHTE
T ss_pred HHHHHHHCCCEEECCCEEEEEEEcCC-----ceEEEEE--CCCceeEEE-----eCEEEECCCc-chHHHHHHh
Confidence 44566678999999999999998776 3233544 366545565 7999999997 588887766
No 21
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.24 E-value=7.4e-11 Score=128.57 Aligned_cols=58 Identities=16% Similarity=0.186 Sum_probs=46.1
Q ss_pred hhhhcCCCC-eEEEcCcEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEeeecCCCcEEEEccCCcCcH
Q 008163 218 LLEYANPSG-LTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSP 285 (575)
Q Consensus 218 ~l~~~~~~g-~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~-~~g~~~~v~~~~~aa~~VVlAaG~~~sp 285 (575)
++..+++.| ++|++++.|++|+.+++ +++||.+.+ .+|+.+++. ++.||+|+|++...
T Consensus 140 L~~~~~~~gnv~i~~~~~v~~l~~~~g-----~v~Gv~~~~~~~G~~~~i~-----A~~VVlAtGg~s~~ 199 (602)
T 1kf6_A 140 LFQTSLQFPQIQRFDEHFVLDILVDDG-----HVRGLVAMNMMEGTLVQIR-----ANAVVMATGGAGRV 199 (602)
T ss_dssp HHHHHTTCTTEEEEETEEEEEEEEETT-----EEEEEEEEETTTTEEEEEE-----CSCEEECCCCCGGG
T ss_pred HHHHHHhCCCcEEEeCCEEEEEEEeCC-----EEEEEEEEEcCCCcEEEEE-----cCeEEECCCCCccc
Confidence 445555566 99999999999999876 999998875 467655665 78999999997654
No 22
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.21 E-value=5.3e-11 Score=125.48 Aligned_cols=54 Identities=19% Similarity=0.365 Sum_probs=42.7
Q ss_pred hhhhcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCCcCcH
Q 008163 218 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSP 285 (575)
Q Consensus 218 ~l~~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~~~sp 285 (575)
+...+++.|++|+++++|++|..+++ ++.+|.+. +|+ ++. ++.||+|+|++..|
T Consensus 140 L~~~~~~~GV~i~~~~~V~~i~~~~~-----~v~~V~~~--~G~--~i~-----Ad~VVlAtGg~s~~ 193 (447)
T 2i0z_A 140 LLTRLKDLGVKIRTNTPVETIEYENG-----QTKAVILQ--TGE--VLE-----TNHVVIAVGGKSVP 193 (447)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETT-----EEEEEEET--TCC--EEE-----CSCEEECCCCSSSG
T ss_pred HHHHHHHCCCEEEeCcEEEEEEecCC-----cEEEEEEC--CCC--EEE-----CCEEEECCCCCcCC
Confidence 45556668999999999999998766 77888764 564 344 79999999998765
No 23
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.20 E-value=5e-11 Score=129.06 Aligned_cols=64 Identities=22% Similarity=0.279 Sum_probs=51.7
Q ss_pred hhhhcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeC-CCceeEEeeecCCCcEEEEccCCcCcHHHHHhhc
Q 008163 218 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 292 (575)
Q Consensus 218 ~l~~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~-~g~~~~v~~~~~aa~~VVlAaG~~~sp~lLl~Sg 292 (575)
+...+.+.|++|+++++|++|..+++ +++||.+.+. +|+..++. ++.||+|+|. ++.+++...|
T Consensus 176 L~~~a~~~G~~i~~~~~V~~l~~~~g-----~v~gV~~~d~~tg~~~~i~-----A~~VV~AaG~-~s~~l~~~~g 240 (561)
T 3da1_A 176 IMKEAVARGAVALNYMKVESFIYDQG-----KVVGVVAKDRLTDTTHTIY-----AKKVVNAAGP-WVDTLREKDR 240 (561)
T ss_dssp HHHHHHHTTCEEEESEEEEEEEEETT-----EEEEEEEEETTTCCEEEEE-----EEEEEECCGG-GHHHHHHTTT
T ss_pred HHHHHHHcCCEEEcCCEEEEEEEcCC-----eEEEEEEEEcCCCceEEEE-----CCEEEECCCc-chHHHHHhcC
Confidence 44456667999999999999999877 8999999863 45556665 7999999997 6888887766
No 24
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.19 E-value=1.5e-11 Score=128.13 Aligned_cols=39 Identities=28% Similarity=0.447 Sum_probs=32.4
Q ss_pred CCCCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 43 QPVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 43 ~~~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
+++.+|||||||+|++|+++|+.|++ |.+|+|||+++..
T Consensus 23 M~~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~ 62 (417)
T 3v76_A 23 MVAEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAP 62 (417)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 34568999999999999999999999 9999999999754
No 25
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.19 E-value=2.9e-11 Score=124.52 Aligned_cols=37 Identities=38% Similarity=0.583 Sum_probs=33.5
Q ss_pred CCcccEEEECCCcchhHHHHhhcCCCeEEEEeccCCC
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQNASVLLLERGGSP 81 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~G~~VlvLE~G~~~ 81 (575)
+.++||||||+|++|+++|++|++|++|+|||+++..
T Consensus 7 ~~~~dv~IIGaGi~Gls~A~~La~G~~V~vlE~~~~~ 43 (381)
T 3nyc_A 7 PIEADYLVIGAGIAGASTGYWLSAHGRVVVLEREAQP 43 (381)
T ss_dssp EEECSEEEECCSHHHHHHHHHHTTTSCEEEECSSSST
T ss_pred CCcCCEEEECCcHHHHHHHHHHhCCCCEEEEECCCCc
Confidence 3479999999999999999999999999999998643
No 26
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.16 E-value=5.2e-11 Score=122.79 Aligned_cols=59 Identities=19% Similarity=0.169 Sum_probs=44.6
Q ss_pred hhhhcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCCcCcHHHHHhhc
Q 008163 218 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 292 (575)
Q Consensus 218 ~l~~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~~~sp~lLl~Sg 292 (575)
+...+++.|++++++++|++|..+++ +++||+.. +| ++. ++.||+|+|+ +++.++...+
T Consensus 155 l~~~~~~~Gv~i~~~~~v~~i~~~~~-----~v~gv~~~--~g---~i~-----a~~VV~A~G~-~s~~l~~~~g 213 (382)
T 1y56_B 155 FAVKAKEYGAKLLEYTEVKGFLIENN-----EIKGVKTN--KG---IIK-----TGIVVNATNA-WANLINAMAG 213 (382)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEESSS-----BEEEEEET--TE---EEE-----CSEEEECCGG-GHHHHHHHHT
T ss_pred HHHHHHHCCCEEECCceEEEEEEECC-----EEEEEEEC--Cc---EEE-----CCEEEECcch-hHHHHHHHcC
Confidence 44456677999999999999998776 77777653 44 344 7999999997 4667766555
No 27
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.13 E-value=2.3e-10 Score=125.80 Aligned_cols=60 Identities=13% Similarity=0.058 Sum_probs=44.8
Q ss_pred hhhhcCCC-Ce-EEEcCcEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEeeecCCCcEEEEccCCcCc
Q 008163 218 LLEYANPS-GL-TLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGS 284 (575)
Q Consensus 218 ~l~~~~~~-g~-~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~-~~g~~~~v~~~~~aa~~VVlAaG~~~s 284 (575)
+...+++. |+ +|++++.|++|+.+++ ..++++||.+.+ .+|+.+.+. ++.||||+|+++.
T Consensus 157 l~~~~~~~~gv~~i~~~~~v~~L~~~~~--~~g~v~Gv~~~~~~~g~~~~i~-----A~~VVlAtGG~~~ 219 (643)
T 1jnr_A 157 IAEAAKMAVGEENIYERVFIFELLKDNN--DPNAVAGAVGFSVREPKFYVFK-----AKAVILATGGATL 219 (643)
T ss_dssp HHHHHHHHHCGGGEECSEEEEEEEECTT--CTTBEEEEEEEESSSSCEEEEE-----CSEEEECCCCBCS
T ss_pred HHHHHHhcCCCcEEEecCEEEEEEEcCC--ccceeEEEEEEEecCCcEEEEE-----cCEEEECCCcccc
Confidence 33444455 89 9999999999998754 012899998765 456655665 7999999999865
No 28
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.12 E-value=6.5e-10 Score=120.56 Aligned_cols=64 Identities=19% Similarity=0.116 Sum_probs=50.1
Q ss_pred hhhhcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeC-CCceeEEeeecCCCcEEEEccCCcCcHHHHHhhc
Q 008163 218 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 292 (575)
Q Consensus 218 ~l~~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~-~g~~~~v~~~~~aa~~VVlAaG~~~sp~lLl~Sg 292 (575)
++..+.+.|++|+++++|++|..+++ ++++|++.+. +|+..++. ++.||+|||+ ++..++...+
T Consensus 194 l~~~a~~~Ga~i~~~t~V~~l~~~~~-----~v~gV~~~d~~tg~~~~i~-----A~~VV~AaG~-ws~~l~~~~g 258 (571)
T 2rgh_A 194 NIKKAAEDGAYLVSKMKAVGFLYEGD-----QIVGVKARDLLTDEVIEIK-----AKLVINTSGP-WVDKVRNLNF 258 (571)
T ss_dssp HHHHHHHTTCEEESSEEEEEEEEETT-----EEEEEEEEETTTCCEEEEE-----BSCEEECCGG-GHHHHHTTCC
T ss_pred HHHHHHHcCCeEEeccEEEEEEEeCC-----EEEEEEEEEcCCCCEEEEE-----cCEEEECCCh-hHHHHHHhhc
Confidence 44456678999999999999999876 8999998863 35544565 7999999997 4888776544
No 29
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.12 E-value=3.1e-11 Score=127.03 Aligned_cols=39 Identities=26% Similarity=0.327 Sum_probs=35.0
Q ss_pred CCCcccEEEECCCcchhHHHHhhcC-CC-eEEEEeccCCCC
Q 008163 44 PVSYYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGGSPY 82 (575)
Q Consensus 44 ~~~~~DvIIVGsG~aG~~~A~~La~-G~-~VlvLE~G~~~~ 82 (575)
+..+|||||||+|++|+++|++|++ |+ +|+||||+....
T Consensus 3 ~~~~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~~~ 43 (438)
T 3dje_A 3 VTKSSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPVPS 43 (438)
T ss_dssp CCTTSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCSSC
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCCCC
Confidence 4557999999999999999999999 99 999999997643
No 30
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.11 E-value=5.2e-11 Score=123.47 Aligned_cols=37 Identities=38% Similarity=0.545 Sum_probs=33.7
Q ss_pred CCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
+++|||||||+|++|+++|+.|++ |.+|+|||+++..
T Consensus 2 M~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~ 39 (401)
T 2gqf_A 2 SQYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKI 39 (401)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 347999999999999999999999 9999999998653
No 31
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.09 E-value=1.1e-10 Score=128.05 Aligned_cols=59 Identities=17% Similarity=0.138 Sum_probs=45.1
Q ss_pred hhhhcCCC--CeEEEcCcEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEeeecCCCcEEEEccCCcC
Q 008163 218 LLEYANPS--GLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALG 283 (575)
Q Consensus 218 ~l~~~~~~--g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~-~~g~~~~v~~~~~aa~~VVlAaG~~~ 283 (575)
+...+++. |++|+.++.|++|+.+++ ..++++||.+.+ .+|+.+.+. ++.||||||+++
T Consensus 172 L~~~a~~~~~gV~i~~~~~v~dLi~~~~--~~g~v~Gv~~~~~~~g~~~~i~-----Ak~VVLATGG~g 233 (662)
T 3gyx_A 172 VAEAAKNALGQDRIIERIFIVKLLLDKN--TPNRIAGAVGFNLRANEVHIFK-----ANAMVVACGGAV 233 (662)
T ss_dssp HHHHHHHHHCTTTEECSEEECCCEECSS--STTBEEEEEEEESSSSCEEEEE-----CSEEEECCCCBC
T ss_pred HHHHHHhcCCCcEEEEceEEEEEEEeCC--ccceEEEEEEEEcCCCcEEEEE-----eCEEEECCCccc
Confidence 34444444 999999999999999765 012899998875 356666665 799999999987
No 32
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.06 E-value=1.7e-09 Score=115.57 Aligned_cols=60 Identities=15% Similarity=0.014 Sum_probs=45.7
Q ss_pred hhhhcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEeeecCCCcEEEEccCCcCcHHHHH
Q 008163 218 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 289 (575)
Q Consensus 218 ~l~~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~-~~g~~~~v~~~~~aa~~VVlAaG~~~sp~lLl 289 (575)
+...+.+.|++++++++|++|..++ ++.+|.+.+ .+|+..++. ++.||+|+|+ ++..++.
T Consensus 155 l~~~a~~~Gv~i~~~~~V~~l~~~~------~~~~V~~~d~~~G~~~~i~-----A~~VV~AtG~-~s~~l~~ 215 (501)
T 2qcu_A 155 NAQMVVRKGGEVLTRTRATSARREN------GLWIVEAEDIDTGKKYSWQ-----ARGLVNATGP-WVKQFFD 215 (501)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEEET------TEEEEEEEETTTCCEEEEE-----ESCEEECCGG-GHHHHHH
T ss_pred HHHHHHHcCCEEEcCcEEEEEEEeC------CEEEEEEEECCCCCEEEEE-----CCEEEECCCh-hHHHHHH
Confidence 4445666799999999999998864 467888765 356655665 7999999998 4777765
No 33
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.04 E-value=3.3e-10 Score=128.65 Aligned_cols=59 Identities=17% Similarity=0.161 Sum_probs=45.3
Q ss_pred hhhhcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCCcCcHHHHHhhc
Q 008163 218 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 292 (575)
Q Consensus 218 ~l~~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~~~sp~lLl~Sg 292 (575)
+...+++.|++|+++++|++|..+++ ++++|.+. +| ++. ++.||+|+|+ +++.++...|
T Consensus 157 L~~~a~~~Gv~i~~~t~V~~i~~~~~-----~v~~V~t~--~G---~i~-----Ad~VV~AaG~-~s~~l~~~~g 215 (830)
T 1pj5_A 157 LIKRTESAGVTYRGSTTVTGIEQSGG-----RVTGVQTA--DG---VIP-----ADIVVSCAGF-WGAKIGAMIG 215 (830)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETT-----EEEEEEET--TE---EEE-----CSEEEECCGG-GHHHHHHTTT
T ss_pred HHHHHHHcCCEEECCceEEEEEEeCC-----EEEEEEEC--Cc---EEE-----CCEEEECCcc-chHHHHHHhC
Confidence 44566678999999999999998776 77777653 44 344 7999999998 5677766655
No 34
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.04 E-value=5.9e-10 Score=115.57 Aligned_cols=36 Identities=33% Similarity=0.540 Sum_probs=33.2
Q ss_pred CcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
.++||||||+|++|+++|+.|++ |++|+||||+...
T Consensus 3 ~~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~ 39 (397)
T 2oln_A 3 ESYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFF 39 (397)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 46999999999999999999999 9999999998653
No 35
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.04 E-value=1.3e-09 Score=113.05 Aligned_cols=59 Identities=17% Similarity=0.238 Sum_probs=44.1
Q ss_pred hhhhcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCCcCcHHHHHhhc
Q 008163 218 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 292 (575)
Q Consensus 218 ~l~~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~~~sp~lLl~Sg 292 (575)
+...+++.|++++++++|++|..+++ ++++|... +| ++. ++.||+|+|+ .++.++...+
T Consensus 180 l~~~~~~~g~~i~~~~~v~~i~~~~~-----~~~~v~~~--~g---~~~-----a~~vV~a~G~-~s~~l~~~~g 238 (405)
T 2gag_B 180 FARKANEMGVDIIQNCEVTGFIKDGE-----KVTGVKTT--RG---TIH-----AGKVALAGAG-HSSVLAEMAG 238 (405)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEESSS-----BEEEEEET--TC---CEE-----EEEEEECCGG-GHHHHHHHHT
T ss_pred HHHHHHHCCCEEEcCCeEEEEEEeCC-----EEEEEEeC--Cc---eEE-----CCEEEECCch-hHHHHHHHcC
Confidence 44456667999999999999998766 77777653 45 343 6999999997 4667766555
No 36
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.03 E-value=7.5e-10 Score=117.33 Aligned_cols=52 Identities=15% Similarity=0.256 Sum_probs=40.0
Q ss_pred hhhhcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCCcC
Q 008163 218 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALG 283 (575)
Q Consensus 218 ~l~~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~~~ 283 (575)
+...+++.|++++++++| +|+.+++ +++||.+.+.+| ++. ++.||+|+|++.
T Consensus 125 L~~~~~~~gv~i~~~~~v-~l~~~~~-----~v~Gv~v~~~~g---~~~-----a~~VVlAtGg~~ 176 (472)
T 2e5v_A 125 LLKLAREEGIPIIEDRLV-EIRVKDG-----KVTGFVTEKRGL---VED-----VDKLVLATGGYS 176 (472)
T ss_dssp HHHHHHHTTCCEECCCEE-EEEEETT-----EEEEEEETTTEE---ECC-----CSEEEECCCCCG
T ss_pred HHHHHHhCCCEEEECcEE-EEEEeCC-----EEEEEEEEeCCC---eEE-----eeeEEECCCCCc
Confidence 444556679999999999 9998876 899998864233 233 799999999864
No 37
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.01 E-value=1.6e-09 Score=120.49 Aligned_cols=36 Identities=33% Similarity=0.413 Sum_probs=33.1
Q ss_pred CcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
.++||||||+|++|+++|++|++ |++|+|||++...
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~ 299 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRRGAVVTLYCADAQP 299 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSST
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCcc
Confidence 46999999999999999999999 9999999998543
No 38
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.01 E-value=5e-10 Score=124.34 Aligned_cols=35 Identities=31% Similarity=0.325 Sum_probs=32.5
Q ss_pred CcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
..+||||||+|++|+++|++|++ |.+|+||||...
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~ 306 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRRGWQVTLYCADEA 306 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 45999999999999999999999 999999999754
No 39
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.99 E-value=1.2e-09 Score=112.35 Aligned_cols=38 Identities=32% Similarity=0.540 Sum_probs=33.9
Q ss_pred CCCCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 43 QPVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 43 ~~~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
..+.+|||||||+|++|+++|++|++ |.+|+|||++..
T Consensus 13 ~~~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~ 51 (382)
T 1ryi_A 13 AMKRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTM 51 (382)
T ss_dssp -CCSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSST
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 34557999999999999999999999 999999999853
No 40
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.95 E-value=8.6e-10 Score=113.81 Aligned_cols=56 Identities=16% Similarity=0.165 Sum_probs=43.0
Q ss_pred hhhhcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCCcCcH
Q 008163 218 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSP 285 (575)
Q Consensus 218 ~l~~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~~~sp 285 (575)
+...+.+.|++++.+++|+.+..+++ ++++|.... +++..++. ++.||.|.|. .|.
T Consensus 108 L~~~a~~~G~~~~~~~~v~~~~~~~~-----~~~~v~~~~-~~~~~~~~-----a~~vIgAdG~-~S~ 163 (397)
T 3oz2_A 108 LAALAAKAGADVWVKSPALGVIKENG-----KVAGAKIRH-NNEIVDVR-----AKMVIAADGF-ESE 163 (397)
T ss_dssp HHHHHHHHTCEEESSCCEEEEEEETT-----EEEEEEEEE-TTEEEEEE-----EEEEEECCCT-TCH
T ss_pred HHHHHHhcCcEEeeeeeeeeeeeccc-----eeeeeeecc-cccceEEE-----EeEEEeCCcc-ccH
Confidence 34456667999999999999999887 888888775 56666665 6878888775 443
No 41
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.94 E-value=1.3e-09 Score=114.80 Aligned_cols=33 Identities=33% Similarity=0.684 Sum_probs=31.4
Q ss_pred CcccEEEECCCcchhHHHHhhcC-C-CeEEEEecc
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ-N-ASVLLLERG 78 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~-G-~~VlvLE~G 78 (575)
.+|||||||+|++|+++|++|++ | .+|+|||+.
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~ 56 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAG 56 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccC
Confidence 57999999999999999999999 9 999999993
No 42
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.91 E-value=1.5e-09 Score=111.90 Aligned_cols=35 Identities=26% Similarity=0.537 Sum_probs=32.7
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
+|||||||+|++|+++|++|++ |++|+|||++...
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~ 38 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPP 38 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 5999999999999999999999 9999999998653
No 43
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.91 E-value=5.5e-10 Score=119.51 Aligned_cols=70 Identities=13% Similarity=0.154 Sum_probs=46.4
Q ss_pred CCCCccccHHHhhhhcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCCcCcHH
Q 008163 207 DQNGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQ 286 (575)
Q Consensus 207 ~~~g~r~~~~~~l~~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~~~sp~ 286 (575)
+..|....+..+.+.+++.|++|+++++|++|+.+++ +++||++. +|+. +. ++.||++++...+.+
T Consensus 216 p~GG~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~-----~~~gV~~~--~g~~--~~-----ad~VV~~a~~~~~~~ 281 (501)
T 4dgk_A 216 PRGGTGALVQGMIKLFQDLGGEVVLNARVSHMETTGN-----KIEAVHLE--DGRR--FL-----TQAVASNADVVHTYR 281 (501)
T ss_dssp ETTHHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETT-----EEEEEEET--TSCE--EE-----CSCEEECCC------
T ss_pred eCCCCcchHHHHHHHHHHhCCceeeecceeEEEeeCC-----eEEEEEec--CCcE--EE-----cCEEEECCCHHHHHH
Confidence 4444443334456677788999999999999999988 99999886 6764 33 799999999877776
Q ss_pred HHHh
Q 008163 287 LLML 290 (575)
Q Consensus 287 lLl~ 290 (575)
.|+-
T Consensus 282 ~Ll~ 285 (501)
T 4dgk_A 282 DLLS 285 (501)
T ss_dssp ----
T ss_pred Hhcc
Confidence 6653
No 44
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.87 E-value=4.7e-09 Score=109.72 Aligned_cols=57 Identities=18% Similarity=0.166 Sum_probs=45.0
Q ss_pred hhhhcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCCcCcHHHHH
Q 008163 218 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 289 (575)
Q Consensus 218 ~l~~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~~~sp~lLl 289 (575)
+...+++.|++|+++++|++|..+++ +++||.+ +|+ ++. ++.||+|++...+.+||.
T Consensus 202 l~~~~~~~G~~i~~~~~V~~i~~~~~-----~~~gv~~---~g~--~~~-----ad~VV~a~~~~~~~~ll~ 258 (425)
T 3ka7_A 202 LETVISANGGKIHTGQEVSKILIENG-----KAAGIIA---DDR--IHD-----ADLVISNLGHAATAVLCS 258 (425)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETT-----EEEEEEE---TTE--EEE-----CSEEEECSCHHHHHHHTT
T ss_pred HHHHHHHcCCEEEECCceeEEEEECC-----EEEEEEE---CCE--EEE-----CCEEEECCCHHHHHHhcC
Confidence 55566677999999999999999877 8888865 353 343 799999999887777553
No 45
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.87 E-value=1.6e-08 Score=99.65 Aligned_cols=36 Identities=33% Similarity=0.573 Sum_probs=32.9
Q ss_pred CcccEEEECCCcchhHHHHhhcC--CCeEEEEeccCCC
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSP 81 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~--G~~VlvLE~G~~~ 81 (575)
.+|||||||+|++|+++|+.|++ |.+|+|||+.+..
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~ 75 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSP 75 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSC
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCC
Confidence 46999999999999999999998 8999999998653
No 46
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.86 E-value=8.6e-09 Score=106.54 Aligned_cols=55 Identities=15% Similarity=0.148 Sum_probs=42.3
Q ss_pred hhhhcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCCcC
Q 008163 218 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALG 283 (575)
Q Consensus 218 ~l~~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~~~ 283 (575)
+...+++.|++++.+++|+++..+++ +++||.+.+ .+...++. ++.||.|+|...
T Consensus 108 L~~~~~~~gv~i~~~~~v~~i~~~~~-----~v~gv~~~~-~~~~~~~~-----a~~vV~A~G~~s 162 (397)
T 3cgv_A 108 LAALAAKAGADVWVKSPALGVIKENG-----KVAGAKIRH-NNEIVDVR-----AKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHTCEEESSCCEEEEEEETT-----EEEEEEEEE-TTEEEEEE-----EEEEEECCCTTC
T ss_pred HHHHHHhCCCEEEECCEEEEEEEeCC-----EEEEEEEEE-CCeEEEEE-----cCEEEECCCcch
Confidence 33455567999999999999999876 899998875 34444565 799999999643
No 47
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.84 E-value=4.5e-09 Score=112.51 Aligned_cols=36 Identities=28% Similarity=0.309 Sum_probs=33.2
Q ss_pred CCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
...+||||||+|++|+++|+.|++ |++|+|||++..
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~ 141 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKE 141 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCc
Confidence 346999999999999999999999 999999999964
No 48
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.83 E-value=1.8e-08 Score=107.97 Aligned_cols=55 Identities=27% Similarity=0.344 Sum_probs=45.0
Q ss_pred hhhhcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCCc
Q 008163 218 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGAL 282 (575)
Q Consensus 218 ~l~~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~~ 282 (575)
+...+++.|++|+.+++|++|..+++ ++++|.+.+.+|+..++. ++.||.|+|..
T Consensus 117 L~~~a~~~Gv~i~~~~~V~~v~~~~~-----~v~gv~~~~~dG~~~~i~-----ad~VI~AdG~~ 171 (512)
T 3e1t_A 117 LLRNSERKGVDVRERHEVIDVLFEGE-----RAVGVRYRNTEGVELMAH-----ARFIVDASGNR 171 (512)
T ss_dssp HHHHHHHTTCEEESSCEEEEEEEETT-----EEEEEEEECSSSCEEEEE-----EEEEEECCCTT
T ss_pred HHHHHHhCCCEEEcCCEEEEEEEECC-----EEEEEEEEeCCCCEEEEE-----cCEEEECCCcc
Confidence 33455568999999999999999877 899999987677655665 79999999974
No 49
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.83 E-value=2.5e-09 Score=109.62 Aligned_cols=35 Identities=31% Similarity=0.536 Sum_probs=32.7
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
+|||||||+|++|+++|++|++ |++|+|||++...
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~ 37 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPP 37 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 5899999999999999999999 9999999998654
No 50
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.83 E-value=6.7e-09 Score=109.62 Aligned_cols=56 Identities=18% Similarity=0.269 Sum_probs=44.1
Q ss_pred hhhhcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeC-CCceeEEeeecCCCcEEEEccCCcC
Q 008163 218 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALG 283 (575)
Q Consensus 218 ~l~~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~-~g~~~~v~~~~~aa~~VVlAaG~~~ 283 (575)
+...+.+.|++++++++|+++..+++ +++||.+.+. +|+..++. ++.||.|+|+..
T Consensus 106 L~~~a~~~gv~i~~~~~v~~i~~~~~-----~v~gv~~~~~~~G~~~~~~-----ad~VV~AdG~~s 162 (453)
T 3atr_A 106 VLKEAQDRGVEIWDLTTAMKPIFEDG-----YVKGAVLFNRRTNEELTVY-----SKVVVEATGYSR 162 (453)
T ss_dssp HHHHHHHTTCEEESSEEEEEEEEETT-----EEEEEEEEETTTTEEEEEE-----CSEEEECCGGGC
T ss_pred HHHHHHHcCCEEEeCcEEEEEEEECC-----EEEEEEEEEcCCCceEEEE-----cCEEEECcCCch
Confidence 34455557999999999999998876 8999988764 56655665 799999999743
No 51
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.80 E-value=9.4e-09 Score=107.73 Aligned_cols=43 Identities=33% Similarity=0.482 Sum_probs=38.0
Q ss_pred CCCCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCCCCCC
Q 008163 43 QPVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYGNP 85 (575)
Q Consensus 43 ~~~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~~~~~ 85 (575)
.++++|||||||+|.+|+++|+.|++ |++|+||||++..++..
T Consensus 16 ~~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~ 59 (475)
T 3p1w_A 16 FQGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGET 59 (475)
T ss_dssp -CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGG
T ss_pred cccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCc
Confidence 45678999999999999999999999 99999999998876543
No 52
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.80 E-value=2e-08 Score=104.73 Aligned_cols=35 Identities=26% Similarity=0.398 Sum_probs=32.7
Q ss_pred CcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
.+|||||||+|++|+++|+.|++ |.+|+|||+...
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~ 39 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKF 39 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCS
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 46999999999999999999999 999999999854
No 53
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.75 E-value=5.4e-08 Score=97.27 Aligned_cols=36 Identities=31% Similarity=0.550 Sum_probs=32.7
Q ss_pred CcccEEEECCCcchhHHHHhhcC---CCeEEEEeccCCC
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGSP 81 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~---G~~VlvLE~G~~~ 81 (575)
.+|||||||+|++|+++|+.|++ |++|+|||++...
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~ 116 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAP 116 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCcc
Confidence 36999999999999999999998 8999999998653
No 54
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.72 E-value=2.4e-08 Score=108.32 Aligned_cols=53 Identities=21% Similarity=0.203 Sum_probs=41.2
Q ss_pred hhhhcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCC
Q 008163 218 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGA 281 (575)
Q Consensus 218 ~l~~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~ 281 (575)
+...+++.|++++.+++|++|..+++ .+.+|.+.+ +|+..++. ++.||.|+|.
T Consensus 134 L~~~a~~~Gv~i~~g~~V~~v~~~~g-----~~~~V~~~~-~G~~~~i~-----AdlVV~AdG~ 186 (591)
T 3i3l_A 134 LLDEARSRGITVHEETPVTDVDLSDP-----DRVVLTVRR-GGESVTVE-----SDFVIDAGGS 186 (591)
T ss_dssp HHHHHHHTTCEEETTCCEEEEECCST-----TCEEEEEEE-TTEEEEEE-----ESEEEECCGG
T ss_pred HHHHHHhCCCEEEeCCEEEEEEEcCC-----CEEEEEEec-CCceEEEE-----cCEEEECCCC
Confidence 34456668999999999999998755 567887775 56555665 7999999997
No 55
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.70 E-value=3.5e-08 Score=102.99 Aligned_cols=37 Identities=22% Similarity=0.416 Sum_probs=33.7
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCCCCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYGN 84 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~~~~ 84 (575)
.||||||+|++|+++|++|++ |++|+||||.+..++.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~ 38 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGR 38 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCce
Confidence 389999999999999999999 9999999999876653
No 56
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.63 E-value=3.8e-08 Score=99.69 Aligned_cols=34 Identities=21% Similarity=0.369 Sum_probs=30.8
Q ss_pred ccEEEECCCcchhHHHHhhcC----CCeEEEEeccCCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ----NASVLLLERGGSP 81 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~----G~~VlvLE~G~~~ 81 (575)
+||||||+|++|+++|+.|++ |.+|+|+||++..
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~ 39 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDS 39 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCC
Confidence 599999999999999999987 6899999998643
No 57
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.61 E-value=2.5e-08 Score=103.56 Aligned_cols=36 Identities=42% Similarity=0.713 Sum_probs=32.4
Q ss_pred CcccEEEECCCcchhHHHHhhcC---CCeEEEEeccCCC
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGSP 81 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~---G~~VlvLE~G~~~ 81 (575)
.+|||||||+|++|+++|+.|++ |++|+|||++...
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~ 73 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLP 73 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSS
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 46999999999999999999987 7999999998543
No 58
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.59 E-value=6.4e-08 Score=104.11 Aligned_cols=34 Identities=26% Similarity=0.480 Sum_probs=32.0
Q ss_pred CcccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.+|||||||+|.+|+.+|+.|++ |.+|+|||++.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~ 60 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNA 60 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecc
Confidence 36999999999999999999999 99999999984
No 59
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.56 E-value=7.3e-08 Score=104.06 Aligned_cols=35 Identities=37% Similarity=0.525 Sum_probs=32.6
Q ss_pred CCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
..+|||||||+|.+|+.+|+.|++ |.+|+|||++.
T Consensus 26 ~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 61 (651)
T 3ces_A 26 PDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNI 61 (651)
T ss_dssp SSCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecc
Confidence 357999999999999999999999 99999999984
No 60
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.56 E-value=4.7e-07 Score=89.94 Aligned_cols=36 Identities=28% Similarity=0.527 Sum_probs=32.4
Q ss_pred CcccEEEECCCcchhHHHHhhcC---CCeEEEEeccCCC
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGSP 81 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~---G~~VlvLE~G~~~ 81 (575)
.+|||+|||+|++|+++|+.|++ |++|+|+|++...
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ 102 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccc
Confidence 46899999999999999999997 7999999998653
No 61
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.55 E-value=3e-07 Score=87.58 Aligned_cols=34 Identities=32% Similarity=0.427 Sum_probs=31.9
Q ss_pred CcccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.+|||||||+|++|+.+|..|++ |.+|+|||++.
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~ 36 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSL 36 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 36999999999999999999999 99999999983
No 62
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.54 E-value=1.8e-06 Score=86.09 Aligned_cols=61 Identities=18% Similarity=0.245 Sum_probs=46.4
Q ss_pred hcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEeeecCCCcEEEEccCCcCcHHHHHhhc
Q 008163 221 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 292 (575)
Q Consensus 221 ~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~-~~g~~~~v~~~~~aa~~VVlAaG~~~sp~lLl~Sg 292 (575)
..++.|+++++++.|+++..+ + ++.+|++.+ .+|+..++. ++.||+|+|..-+..+|..++
T Consensus 199 ~~~~~gv~~~~~~~v~~i~~~-~-----~~~~v~~~~~~~g~~~~~~-----~D~vv~a~G~~p~~~~~~~~g 260 (323)
T 3f8d_A 199 VKKKPNVEFVLNSVVKEIKGD-K-----VVKQVVVENLKTGEIKELN-----VNGVFIEIGFDPPTDFAKSNG 260 (323)
T ss_dssp HHTCTTEEEECSEEEEEEEES-S-----SEEEEEEEETTTCCEEEEE-----CSEEEECCCEECCHHHHHHTT
T ss_pred HHhCCCcEEEeCCEEEEEecc-C-----ceeEEEEEECCCCceEEEE-----cCEEEEEECCCCChhHHhhcC
Confidence 445569999999999999765 3 677888875 346655564 799999999776667777665
No 63
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.54 E-value=1.4e-07 Score=95.65 Aligned_cols=35 Identities=31% Similarity=0.552 Sum_probs=32.6
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
.|||+|||+|++|+++|..|++ |.+|+|+|+.+..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~ 38 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASP 38 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 6999999999999999999999 9999999998643
No 64
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.53 E-value=6.7e-07 Score=96.30 Aligned_cols=37 Identities=27% Similarity=0.398 Sum_probs=33.9
Q ss_pred CCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
+.++||||||+|++|+++|+.|++ |.+|+||||.+..
T Consensus 3 ~~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~ 40 (535)
T 3ihg_A 3 DHEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGL 40 (535)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSC
T ss_pred CccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 357999999999999999999999 9999999998653
No 65
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.52 E-value=1.9e-07 Score=101.47 Aligned_cols=59 Identities=22% Similarity=0.309 Sum_probs=43.8
Q ss_pred hhhhcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEe----CCCce-------eEEeeecCCCcEEEEccCCcCcH
Q 008163 218 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD----ATGAK-------HRAYLKNGPKNEIIVSAGALGSP 285 (575)
Q Consensus 218 ~l~~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~----~~g~~-------~~v~~~~~aa~~VVlAaG~~~sp 285 (575)
+...+++.|++|+++++|++|..++++ +++||.+.+ .+|+. .++. ++.||+|.|+...-
T Consensus 150 L~~~a~~~Gv~i~~g~~v~~l~~~~~g----~V~gV~~~~~g~~~~G~~~~~~~~g~~i~-----Ad~VV~AdG~~S~v 219 (584)
T 2gmh_A 150 MGEQAEALGVEVYPGYAAAEILFHEDG----SVKGIATNDVGIQKDGAPKTTFERGLELH-----AKVTIFAEGCHGHL 219 (584)
T ss_dssp HHHHHHHTTCEEETTCCEEEEEECTTS----SEEEEEECCEEECTTSCEEEEEECCCEEE-----CSEEEECCCTTCHH
T ss_pred HHHHHHHcCCEEEcCCEEEEEEEcCCC----CEEEEEeCCccccCCCCcccccCCceEEE-----CCEEEEeeCCCchH
Confidence 344556679999999999999988753 788888763 24532 3454 79999999987653
No 66
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.50 E-value=2.3e-07 Score=93.44 Aligned_cols=35 Identities=29% Similarity=0.401 Sum_probs=32.4
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
.+||||||+|++|+++|+.|++ |.+|+||||.+..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~ 37 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 4799999999999999999999 9999999998653
No 67
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.50 E-value=5e-07 Score=96.26 Aligned_cols=39 Identities=33% Similarity=0.379 Sum_probs=34.5
Q ss_pred CCCCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 43 QPVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 43 ~~~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
.+..++||||||+|++|+++|+.|++ |.+|+||||.+..
T Consensus 7 ~~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~ 46 (500)
T 2qa1_A 7 HHRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVER 46 (500)
T ss_dssp -CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-
T ss_pred CccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 45668999999999999999999999 9999999998653
No 68
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.48 E-value=1.5e-07 Score=101.52 Aligned_cols=36 Identities=31% Similarity=0.576 Sum_probs=32.2
Q ss_pred CCCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 44 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 44 ~~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
+...|||||||+|.+|+.+|+.|++ |.+|+|||+..
T Consensus 18 ~~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 54 (641)
T 3cp8_A 18 GSHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDL 54 (641)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred ccCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecc
Confidence 3457999999999999999999999 99999999974
No 69
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.44 E-value=6.3e-07 Score=92.96 Aligned_cols=39 Identities=23% Similarity=0.193 Sum_probs=32.9
Q ss_pred CCCCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 43 QPVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 43 ~~~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
...+.|||||||+|++|+++|+.|++ |.+|+||||.+..
T Consensus 19 ~~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~ 58 (407)
T 3rp8_A 19 YFQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEI 58 (407)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 34557999999999999999999999 9999999998643
No 70
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.42 E-value=1.5e-06 Score=92.63 Aligned_cols=38 Identities=32% Similarity=0.378 Sum_probs=33.5
Q ss_pred CCCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 44 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 44 ~~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
...++||||||+|++|+++|..|++ |.+|+||||.+..
T Consensus 9 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~ 47 (499)
T 2qa2_A 9 HRSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQR 47 (499)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSC
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 3457999999999999999999999 9999999998653
No 71
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.42 E-value=5.4e-07 Score=93.15 Aligned_cols=35 Identities=29% Similarity=0.409 Sum_probs=32.6
Q ss_pred CcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
.++||||||+|++|+++|+.|++ |.+|+|+|+.+.
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~ 40 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARR 40 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 46999999999999999999999 999999999854
No 72
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.41 E-value=5.5e-07 Score=97.43 Aligned_cols=36 Identities=33% Similarity=0.531 Sum_probs=31.2
Q ss_pred CcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
.+|||||||+|++|+++|+.|++ |.+|+||||....
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~ 84 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEP 84 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCC
Confidence 46999999999999999999999 9999999998653
No 73
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.38 E-value=1.5e-06 Score=89.72 Aligned_cols=35 Identities=23% Similarity=0.326 Sum_probs=32.7
Q ss_pred CcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
..+||+|||+|++|+++|..|++ |.+|+|+||.+.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 39 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQ 39 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 46899999999999999999999 999999999864
No 74
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.38 E-value=2.1e-07 Score=99.14 Aligned_cols=38 Identities=24% Similarity=0.364 Sum_probs=34.1
Q ss_pred CCCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 44 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 44 ~~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
....+||+|||+|++|+++|..|++ |.+|+|||+.+..
T Consensus 89 ~~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~ 127 (497)
T 2bry_A 89 ACTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKF 127 (497)
T ss_dssp TTTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSC
T ss_pred ccCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEecccc
Confidence 3457999999999999999999999 9999999998643
No 75
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.34 E-value=7.2e-07 Score=92.81 Aligned_cols=60 Identities=18% Similarity=0.172 Sum_probs=47.2
Q ss_pred hhhcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCCcCcHHHHHhhc
Q 008163 219 LEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 292 (575)
Q Consensus 219 l~~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~~~sp~lLl~Sg 292 (575)
....++.|+++++++.|++|..+++ ++++|++. +|+. +. ++.||+|+|..-+..++..+|
T Consensus 201 ~~~l~~~GV~i~~~~~v~~i~~~~~-----~v~~v~l~--dG~~--i~-----aD~Vv~a~G~~p~~~l~~~~g 260 (415)
T 3lxd_A 201 QAEHRAHGVDLRTGAAMDCIEGDGT-----KVTGVRMQ--DGSV--IP-----ADIVIVGIGIVPCVGALISAG 260 (415)
T ss_dssp HHHHHHTTCEEEETCCEEEEEESSS-----BEEEEEES--SSCE--EE-----CSEEEECSCCEESCHHHHHTT
T ss_pred HHHHHhCCCEEEECCEEEEEEecCC-----cEEEEEeC--CCCE--EE-----cCEEEECCCCccChHHHHhCC
Confidence 3455678999999999999987666 78888775 5653 43 799999999877777777776
No 76
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.34 E-value=5.1e-07 Score=90.79 Aligned_cols=55 Identities=5% Similarity=0.094 Sum_probs=41.8
Q ss_pred CCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeC-CCceeEEeeecCCCcEEEEccCCcCcHHH
Q 008163 223 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQL 287 (575)
Q Consensus 223 ~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~-~g~~~~v~~~~~aa~~VVlAaG~~~sp~l 287 (575)
+..|+++++++.|.+|..+++ ++.+|.+.+. +|+..++. ++.||+|+|..-++.+
T Consensus 220 ~~~gv~i~~~~~v~~i~~~~~-----~~~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~ 275 (338)
T 3itj_A 220 KNEKIEILYNTVALEAKGDGK-----LLNALRIKNTKKNEETDLP-----VSGLFYAIGHTPATKI 275 (338)
T ss_dssp HCTTEEEECSEEEEEEEESSS-----SEEEEEEEETTTTEEEEEE-----CSEEEECSCEEECCGG
T ss_pred hcCCeEEeecceeEEEEcccC-----cEEEEEEEECCCCceEEEE-----eCEEEEEeCCCCChhH
Confidence 445999999999999988766 7889998862 35445554 7999999996544443
No 77
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.32 E-value=6.2e-07 Score=94.66 Aligned_cols=37 Identities=27% Similarity=0.342 Sum_probs=34.3
Q ss_pred cccEEEECCCcchhHHHHhhcC-C------CeEEEEeccCCCCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-N------ASVLLLERGGSPYG 83 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G------~~VlvLE~G~~~~~ 83 (575)
.+||||||+|++|+++|++|++ | .+|+|||+.+..++
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG 48 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGG 48 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCT
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCc
Confidence 5899999999999999999999 9 99999999977654
No 78
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.31 E-value=1.9e-06 Score=90.52 Aligned_cols=38 Identities=39% Similarity=0.497 Sum_probs=34.1
Q ss_pred CCcccEEEECCCcchhHHHHhhcC-CC--eEEEEeccCCCC
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ-NA--SVLLLERGGSPY 82 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~-G~--~VlvLE~G~~~~ 82 (575)
...+||+|||+|++|+++|..|++ |. +|+|+|+.+..+
T Consensus 4 ~~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~G 44 (447)
T 2gv8_A 4 PTIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPG 44 (447)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSS
T ss_pred CCCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCC
Confidence 346999999999999999999999 98 999999986543
No 79
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.29 E-value=2.5e-07 Score=89.54 Aligned_cols=36 Identities=28% Similarity=0.353 Sum_probs=33.4
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPY 82 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~~ 82 (575)
++||+|||+|++|+++|+.|++ |++|+|+||.+..+
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~G 38 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSG 38 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC
Confidence 4899999999999999999999 99999999987654
No 80
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.29 E-value=1.4e-06 Score=87.51 Aligned_cols=36 Identities=17% Similarity=0.197 Sum_probs=33.1
Q ss_pred CCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
+..+||+|||+|++|+++|..|++ |++|+|+|+.+.
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~ 39 (335)
T 2zbw_A 3 ADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPE 39 (335)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 457999999999999999999999 999999999854
No 81
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.25 E-value=2.2e-06 Score=92.31 Aligned_cols=37 Identities=22% Similarity=0.380 Sum_probs=33.3
Q ss_pred CCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
...+||||||+|++|+.+|.+|++ |.+|+|+|+++..
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~ 56 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGV 56 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 457999999999999999999999 9999999998653
No 82
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.25 E-value=2.4e-06 Score=87.01 Aligned_cols=33 Identities=39% Similarity=0.603 Sum_probs=31.6
Q ss_pred cccEEEECCCcchhHHHHhhcC-CC-eEEEEeccC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGG 79 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~-~VlvLE~G~ 79 (575)
+|||+|||+|++|+++|.+|++ |. +|+|+|+..
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC
Confidence 6999999999999999999999 99 999999986
No 83
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.23 E-value=1.9e-06 Score=92.60 Aligned_cols=36 Identities=19% Similarity=0.387 Sum_probs=32.9
Q ss_pred CcccEEEECCCcchhHHHHhhc-C-CCeEEEEeccCCC
Q 008163 46 SYYDYIIIGGGTAGCPLAATLS-Q-NASVLLLERGGSP 81 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La-~-G~~VlvLE~G~~~ 81 (575)
..+||||||+|++|+.+|.+|+ + |.+|+|+|+.+..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~ 44 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGP 44 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCC
Confidence 3699999999999999999999 8 9999999998643
No 84
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.23 E-value=4.4e-06 Score=90.08 Aligned_cols=37 Identities=30% Similarity=0.486 Sum_probs=33.7
Q ss_pred CCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
+.++||||||+|++|+++|..|++ |.+|+||||.+..
T Consensus 24 ~~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~ 61 (549)
T 2r0c_A 24 PIETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGT 61 (549)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 457999999999999999999999 9999999998643
No 85
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.22 E-value=3.5e-06 Score=88.85 Aligned_cols=36 Identities=31% Similarity=0.412 Sum_probs=33.3
Q ss_pred CcccEEEECCCcchhHHHHhhcC-C-----CeEEEEeccCCC
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ-N-----ASVLLLERGGSP 81 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~-G-----~~VlvLE~G~~~ 81 (575)
..|||||||+|++|+++|..|++ | .+|+|||+.+..
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~ 70 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDY 70 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCC
Confidence 46999999999999999999999 8 999999999754
No 86
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.22 E-value=4.3e-06 Score=86.53 Aligned_cols=61 Identities=13% Similarity=0.243 Sum_probs=47.7
Q ss_pred hhhhcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCCcCcHHHHHhhc
Q 008163 218 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 292 (575)
Q Consensus 218 ~l~~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~~~sp~lLl~Sg 292 (575)
+....++.|+++++++.|++|..+++ ++.+|++. +|+. +. ++.||+|+|..-+..++..+|
T Consensus 190 l~~~l~~~GV~i~~~~~v~~i~~~~~-----~v~~V~~~--dG~~--i~-----aD~Vv~a~G~~p~~~l~~~~g 250 (404)
T 3fg2_P 190 FHDRHSGAGIRMHYGVRATEIAAEGD-----RVTGVVLS--DGNT--LP-----CDLVVVGVGVIPNVEIAAAAG 250 (404)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETT-----EEEEEEET--TSCE--EE-----CSEEEECCCEEECCHHHHHTT
T ss_pred HHHHHHhCCcEEEECCEEEEEEecCC-----cEEEEEeC--CCCE--EE-----cCEEEECcCCccCHHHHHhCC
Confidence 33455678999999999999988776 88888775 5653 43 799999999877777777776
No 87
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.19 E-value=2.7e-06 Score=87.62 Aligned_cols=33 Identities=30% Similarity=0.422 Sum_probs=31.5
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
+|||||||+|++|+++|+.|++ |.+|+|+||.+
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 35 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQT 35 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 5899999999999999999999 99999999985
No 88
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.17 E-value=6e-07 Score=89.14 Aligned_cols=36 Identities=25% Similarity=0.509 Sum_probs=31.7
Q ss_pred CCCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 44 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 44 ~~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.+++|||||||+|++|+++|.+|++ |++|+|+|++.
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~ 39 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT 39 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 4568999999999999999999999 99999999874
No 89
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.17 E-value=8.3e-06 Score=80.89 Aligned_cols=58 Identities=19% Similarity=0.122 Sum_probs=44.8
Q ss_pred hcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCCcCcHHHH
Q 008163 221 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLL 288 (575)
Q Consensus 221 ~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~~~sp~lL 288 (575)
..++.|+++++++.|.+|..+++ ++.+|.+...+|+..++. ++.||+|+|..-++.++
T Consensus 192 ~~~~~gv~~~~~~~v~~i~~~~~-----~~~~v~~~~~~g~~~~~~-----~D~vv~a~G~~p~~~~~ 249 (315)
T 3r9u_A 192 VKKNEKIELITSASVDEVYGDKM-----GVAGVKVKLKDGSIRDLN-----VPGIFTFVGLNVRNEIL 249 (315)
T ss_dssp HHHCTTEEEECSCEEEEEEEETT-----EEEEEEEECTTSCEEEEC-----CSCEEECSCEEECCGGG
T ss_pred HHhcCCeEEEeCcEEEEEEcCCC-----cEEEEEEEcCCCCeEEee-----cCeEEEEEcCCCCchhh
Confidence 34578999999999999988776 888998885567655554 79999999965444443
No 90
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.17 E-value=4.1e-06 Score=90.19 Aligned_cols=37 Identities=24% Similarity=0.360 Sum_probs=33.8
Q ss_pred CCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
...+||||||+|++|+++|.+|++ |.+|+|+|+++..
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~ 51 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDV 51 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 447999999999999999999999 9999999998654
No 91
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.16 E-value=3.3e-06 Score=90.83 Aligned_cols=37 Identities=30% Similarity=0.391 Sum_probs=33.6
Q ss_pred CCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
+..+||||||+|++|+.+|.+|++ |.+|+|||+++..
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~ 44 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDV 44 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 346999999999999999999999 9999999998653
No 92
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.14 E-value=3.4e-06 Score=84.37 Aligned_cols=34 Identities=38% Similarity=0.404 Sum_probs=32.1
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
.+||+|||+|++|+++|..|++ |++|+|+|+.+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~ 41 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQ 41 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCC
Confidence 5899999999999999999999 999999999864
No 93
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.12 E-value=1.1e-05 Score=89.93 Aligned_cols=38 Identities=34% Similarity=0.385 Sum_probs=34.8
Q ss_pred CcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCCCC
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYG 83 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~~~ 83 (575)
..+||||||+|++|+++|+.|++ |++|+|||+.+..++
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 46999999999999999999999 999999999877654
No 94
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.07 E-value=1.3e-06 Score=87.02 Aligned_cols=34 Identities=38% Similarity=0.551 Sum_probs=31.9
Q ss_pred CcccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.+|||||||+|+||+++|.+|++ |++|+|+|++.
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~ 39 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGI 39 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 47999999999999999999999 99999999863
No 95
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.05 E-value=1.7e-06 Score=90.99 Aligned_cols=43 Identities=28% Similarity=0.441 Sum_probs=38.4
Q ss_pred CCCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCCCCCCC
Q 008163 44 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYGNPN 86 (575)
Q Consensus 44 ~~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~~~~~~ 86 (575)
++.+|||||||+|.+|+++|..|++ |++|+|||+.+..++...
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 51 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAA 51 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGC
T ss_pred ccccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCcccc
Confidence 4567999999999999999999999 999999999998876543
No 96
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.05 E-value=1.6e-05 Score=78.13 Aligned_cols=33 Identities=39% Similarity=0.664 Sum_probs=31.1
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.|||+|||+|++|+++|..|++ |++|+|+|++.
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 35 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGE 35 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3899999999999999999999 99999999874
No 97
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.04 E-value=1.2e-05 Score=84.90 Aligned_cols=35 Identities=17% Similarity=0.268 Sum_probs=31.1
Q ss_pred ccEEEECCCcchhHHHHhhcC----CCe---EEEEeccCCCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ----NAS---VLLLERGGSPY 82 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~----G~~---VlvLE~G~~~~ 82 (575)
+||+|||+|++|+++|..|++ |.+ |+|+|+.+..+
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~G 44 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWG 44 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCC
Confidence 699999999999999999975 788 99999986543
No 98
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.04 E-value=8.7e-06 Score=80.76 Aligned_cols=31 Identities=35% Similarity=0.632 Sum_probs=30.0
Q ss_pred ccEEEECCCcchhHHHHhhcC-CC-eEEEEecc
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERG 78 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~-~VlvLE~G 78 (575)
|||+|||+|++|+++|..|++ |. +|+|+|+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC
Confidence 899999999999999999999 99 99999985
No 99
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.04 E-value=1.3e-06 Score=86.80 Aligned_cols=37 Identities=24% Similarity=0.242 Sum_probs=33.0
Q ss_pred CCCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 44 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 44 ~~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
|.+.|||||||+|+||+++|.+|++ |++|+|+|++..
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~ 38 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMA 38 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSG
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 3456999999999999999999999 999999999753
No 100
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.03 E-value=1.7e-05 Score=85.08 Aligned_cols=35 Identities=34% Similarity=0.513 Sum_probs=31.4
Q ss_pred CcccEEEECCCcchhHHHHhhcC-------------CCeEEEEeccCC
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ-------------NASVLLLERGGS 80 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~-------------G~~VlvLE~G~~ 80 (575)
..+||||||+|++|+++|..|++ |.+|+|||+...
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~ 53 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDV 53 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCC
Confidence 46899999999999999999986 689999999754
No 101
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.01 E-value=1.7e-06 Score=92.41 Aligned_cols=40 Identities=28% Similarity=0.421 Sum_probs=36.0
Q ss_pred CCcccEEEECCCcchhHHHHhhcC--CCeEEEEeccCCCCCC
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSPYGN 84 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~--G~~VlvLE~G~~~~~~ 84 (575)
+.++||||||||++|+++|++|++ |++|+|||+.+..++.
T Consensus 8 ~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~ 49 (513)
T 4gde_A 8 DISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGL 49 (513)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGG
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCC
Confidence 347999999999999999999986 8999999999987763
No 102
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.00 E-value=2.2e-06 Score=86.00 Aligned_cols=37 Identities=27% Similarity=0.477 Sum_probs=33.3
Q ss_pred CcccEEEECCCcchhHHHHhhcC---CCeEEEEeccCCCC
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGSPY 82 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~---G~~VlvLE~G~~~~ 82 (575)
.++||+|||||++|+++|++|++ |++|+|+||++..+
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~G 103 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPG 103 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCC
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCC
Confidence 47999999999999999999974 89999999997654
No 103
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.96 E-value=3.5e-06 Score=85.83 Aligned_cols=37 Identities=27% Similarity=0.312 Sum_probs=34.0
Q ss_pred CCCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 44 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 44 ~~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
|..++||||||+|++|+++|++|++ |.+|+||||...
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~ 40 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLP 40 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCC
Confidence 4567999999999999999999999 999999999864
No 104
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.95 E-value=1.3e-05 Score=83.68 Aligned_cols=60 Identities=13% Similarity=0.184 Sum_probs=43.9
Q ss_pred hhhcCCCCeEEEcCcEEEEEEE--ecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCCcCcHHHHHhhc
Q 008163 219 LEYANPSGLTLLLHASVHKVLF--RIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 292 (575)
Q Consensus 219 l~~~~~~g~~v~~~~~V~~l~~--~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~~~sp~lLl~Sg 292 (575)
....++.|++++++++|++|.. +++ ++.+|.+. +|+. +. ++.||+|+|..-+..++..+|
T Consensus 198 ~~~l~~~GV~i~~~~~v~~i~~~~~~~-----~v~~v~~~--~G~~--i~-----~D~Vv~a~G~~p~~~l~~~~g 259 (431)
T 1q1r_A 198 EHLHREAGVDIRTGTQVCGFEMSTDQQ-----KVTAVLCE--DGTR--LP-----ADLVIAGIGLIPNCELASAAG 259 (431)
T ss_dssp HHHHHHHTCEEECSCCEEEEEECTTTC-----CEEEEEET--TSCE--EE-----CSEEEECCCEEECCHHHHHTT
T ss_pred HHHHHhCCeEEEeCCEEEEEEeccCCC-----cEEEEEeC--CCCE--EE-----cCEEEECCCCCcCcchhhccC
Confidence 3455667999999999999986 344 67777664 5643 43 799999999765656776666
No 105
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.90 E-value=6.5e-05 Score=80.33 Aligned_cols=59 Identities=22% Similarity=0.308 Sum_probs=43.5
Q ss_pred hhcCC-CCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEeeecCCCcEEEEccCCcCcHHHH
Q 008163 220 EYANP-SGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLL 288 (575)
Q Consensus 220 ~~~~~-~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~-~~g~~~~v~~~~~aa~~VVlAaG~~~sp~lL 288 (575)
...++ .|+++++++.|++|..+++ ++++|.+.+ .+|+..++. ++.||+|+|..-++.+|
T Consensus 398 ~~l~~~~gV~v~~~~~v~~i~~~~~-----~v~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~pn~~~l 458 (521)
T 1hyu_A 398 DKVRSLKNVDIILNAQTTEVKGDGS-----KVVGLEYRDRVSGDIHSVA-----LAGIFVQIGLLPNTHWL 458 (521)
T ss_dssp HHHTTCTTEEEECSEEEEEEEECSS-----SEEEEEEEETTTCCEEEEE-----CSEEEECCCEEESCGGG
T ss_pred HHHhcCCCcEEEeCCEEEEEEcCCC-----cEEEEEEEeCCCCceEEEE-----cCEEEECcCCCCCchHH
Confidence 33444 6999999999999986655 788999886 346655665 79999999965444443
No 106
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.88 E-value=4.7e-05 Score=81.30 Aligned_cols=34 Identities=38% Similarity=0.554 Sum_probs=29.1
Q ss_pred cccEEEECCCcchhHHHHhhcC----CCeEEEEeccCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ----NASVLLLERGGS 80 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~----G~~VlvLE~G~~ 80 (575)
.+||||||+|++|+++|+.|++ |.+|+|||+...
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~ 39 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNV 39 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC---
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCC
Confidence 3799999999999999999987 699999999754
No 107
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=97.84 E-value=5.4e-06 Score=86.50 Aligned_cols=36 Identities=44% Similarity=0.690 Sum_probs=33.3
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCCCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYG 83 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~~~ 83 (575)
|||||||+|++|+++|++|++ |++|+|||+.+..++
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG 38 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGG 38 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBT
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccC
Confidence 899999999999999999999 999999999776554
No 108
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.83 E-value=9.1e-06 Score=83.86 Aligned_cols=42 Identities=31% Similarity=0.422 Sum_probs=34.8
Q ss_pred cccCCCCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 40 TAAQPVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 40 ~~~~~~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
..|.++..+||||||+|++|+++|..|++ |.+|+|+||.+..
T Consensus 19 ~~M~~~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 61 (398)
T 2xdo_A 19 SHMNLLSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDR 61 (398)
T ss_dssp ----CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSST
T ss_pred ccccccCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCc
Confidence 33445668999999999999999999999 9999999998653
No 109
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.77 E-value=0.0002 Score=75.56 Aligned_cols=60 Identities=15% Similarity=0.057 Sum_probs=43.4
Q ss_pred hhhhcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCCcCcHHHHHhhc
Q 008163 218 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 292 (575)
Q Consensus 218 ~l~~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~~~sp~lLl~Sg 292 (575)
+...+++.|++++++++|++|..+++ +++ |... +|+ ++. ++.||+|+|..-++.++..+|
T Consensus 208 l~~~l~~~GV~i~~~~~v~~i~~~~~-----~v~-v~~~--~g~--~i~-----aD~Vv~a~G~~p~~~l~~~~g 267 (472)
T 3iwa_A 208 LRHDLEKNDVVVHTGEKVVRLEGENG-----KVA-RVIT--DKR--TLD-----ADLVILAAGVSPNTQLARDAG 267 (472)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEESSS-----BEE-EEEE--SSC--EEE-----CSEEEECSCEEECCHHHHHHT
T ss_pred HHHHHHhcCCEEEeCCEEEEEEccCC-----eEE-EEEe--CCC--EEE-----cCEEEECCCCCcCHHHHHhCC
Confidence 33456678999999999999987555 554 5554 565 343 799999999866666776665
No 110
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.73 E-value=1.3e-05 Score=82.74 Aligned_cols=41 Identities=29% Similarity=0.490 Sum_probs=36.3
Q ss_pred CCCcccEEEECCCcchhHHHHhhcC--CCeEEEEeccCCCCCC
Q 008163 44 PVSYYDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSPYGN 84 (575)
Q Consensus 44 ~~~~~DvIIVGsG~aG~~~A~~La~--G~~VlvLE~G~~~~~~ 84 (575)
|.+++||||||+|++|+++|++|++ |++|+|||+.+..++.
T Consensus 4 m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~ 46 (399)
T 1v0j_A 4 MTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGN 46 (399)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGG
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCe
Confidence 4457999999999999999999998 8999999999876653
No 111
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.73 E-value=1.3e-05 Score=82.23 Aligned_cols=40 Identities=35% Similarity=0.576 Sum_probs=36.0
Q ss_pred CCCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCCCC
Q 008163 44 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYG 83 (575)
Q Consensus 44 ~~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~~~ 83 (575)
+...+||+|||+|++|+++|++|++ |.+|+|||+.+..++
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG 66 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGG 66 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSG
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCC
Confidence 3457999999999999999999999 999999999877654
No 112
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.73 E-value=1.2e-05 Score=83.41 Aligned_cols=37 Identities=32% Similarity=0.390 Sum_probs=32.7
Q ss_pred CCcccEEEECCCcchhHHHHhhcC-CCe-EEEEeccCCC
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ-NAS-VLLLERGGSP 81 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~-G~~-VlvLE~G~~~ 81 (575)
+..+||||||+|++|+++|..|++ |.+ |+||||.+..
T Consensus 2 ~~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~ 40 (410)
T 3c96_A 2 SEPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEI 40 (410)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCc
Confidence 446999999999999999999999 999 9999998653
No 113
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.72 E-value=4e-05 Score=79.35 Aligned_cols=58 Identities=17% Similarity=0.117 Sum_probs=43.2
Q ss_pred hhcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCCcCcHHHHHhhc
Q 008163 220 EYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 292 (575)
Q Consensus 220 ~~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~~~sp~lLl~Sg 292 (575)
...++.|+++++++.|.+|..++ ++.+|++. +|+. +. ++.||+|+|..-+..++..+|
T Consensus 193 ~~l~~~GV~i~~~~~v~~i~~~~------~~~~v~~~--dg~~--i~-----aD~Vv~a~G~~p~~~l~~~~g 250 (410)
T 3ef6_A 193 GLLTELGVQVELGTGVVGFSGEG------QLEQVMAS--DGRS--FV-----ADSALICVGAEPADQLARQAG 250 (410)
T ss_dssp HHHHHHTCEEECSCCEEEEECSS------SCCEEEET--TSCE--EE-----CSEEEECSCEEECCHHHHHTT
T ss_pred HHHHHCCCEEEeCCEEEEEeccC------cEEEEEEC--CCCE--EE-----cCEEEEeeCCeecHHHHHhCC
Confidence 35566799999999999987533 45566664 5653 33 799999999877777877776
No 114
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.71 E-value=1.2e-05 Score=86.03 Aligned_cols=44 Identities=32% Similarity=0.458 Sum_probs=35.2
Q ss_pred cccccccCCCCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 36 MHNATAAQPVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 36 ~~~~~~~~~~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
|.....++++.+|||||||+|++|+++|.+|++ |++|+|+|+.+
T Consensus 21 m~~~~~~~~~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 21 MNGPEDLPKSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp -----CCCSSCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCcccccCcCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 444444556678999999999999999999999 99999999964
No 115
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.71 E-value=1.4e-05 Score=84.58 Aligned_cols=44 Identities=23% Similarity=0.369 Sum_probs=35.0
Q ss_pred cCCCCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCCCCCC
Q 008163 42 AQPVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYGNP 85 (575)
Q Consensus 42 ~~~~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~~~~~ 85 (575)
++....+||||||+|++|+++|+.|++ |.+|+|||+.+..++..
T Consensus 11 ~~~~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~ 55 (478)
T 2ivd_A 11 MPRTTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAV 55 (478)
T ss_dssp ------CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTC
T ss_pred CCCCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCcee
Confidence 445567999999999999999999999 99999999998776543
No 116
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.70 E-value=1.3e-05 Score=85.87 Aligned_cols=39 Identities=28% Similarity=0.478 Sum_probs=35.5
Q ss_pred CcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCCCCC
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYGN 84 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~~~~ 84 (575)
..+||||||||++|+++|++|++ |++|+|||+.+..++.
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr 42 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGR 42 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTT
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCc
Confidence 46899999999999999999999 9999999998877653
No 117
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.70 E-value=1.4e-05 Score=84.95 Aligned_cols=39 Identities=28% Similarity=0.420 Sum_probs=32.6
Q ss_pred CCCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCCC
Q 008163 44 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPY 82 (575)
Q Consensus 44 ~~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~~ 82 (575)
++.+|||||||+|++|+++|.+|++ |++|+|+|+.+..+
T Consensus 22 ~m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~G 61 (491)
T 3urh_A 22 SMMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYG 61 (491)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSS
T ss_pred hcccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCC
Confidence 4457999999999999999999999 99999999976544
No 118
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.69 E-value=1.8e-05 Score=82.26 Aligned_cols=39 Identities=31% Similarity=0.343 Sum_probs=35.5
Q ss_pred CcccEEEECCCcchhHHHHhhcC-C-CeEEEEeccCCCCCC
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ-N-ASVLLLERGGSPYGN 84 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~-G-~~VlvLE~G~~~~~~ 84 (575)
..+||||||+|++|+++|++|++ | .+|+|+|+.+..++.
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~ 45 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGK 45 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCc
Confidence 46899999999999999999999 9 899999998877653
No 119
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.69 E-value=1.4e-05 Score=84.74 Aligned_cols=33 Identities=24% Similarity=0.360 Sum_probs=31.5
Q ss_pred CcccEEEECCCcchhHHHHhhcC-CCeEEEEecc
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
.+|||||||+|++|+++|++|++ |++|+|+|++
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~ 58 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEY 58 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCC
Confidence 47999999999999999999999 9999999994
No 120
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.68 E-value=1.7e-05 Score=80.84 Aligned_cols=38 Identities=42% Similarity=0.679 Sum_probs=34.4
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCCCCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYGN 84 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~~~~ 84 (575)
.|||+|||+|++|+++|++|++ |.+|+|+|+++..++.
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~ 39 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGN 39 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGG
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcc
Confidence 3799999999999999999999 9999999999766543
No 121
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.67 E-value=2.1e-05 Score=82.10 Aligned_cols=42 Identities=29% Similarity=0.438 Sum_probs=37.7
Q ss_pred CCCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCCCCCC
Q 008163 44 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYGNP 85 (575)
Q Consensus 44 ~~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~~~~~ 85 (575)
|+.+|||||||+|.+|+++|..|++ |++|+|+|+.+..++..
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~ 45 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGES 45 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTS
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccc
Confidence 4567999999999999999999999 99999999998877643
No 122
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.67 E-value=9.8e-05 Score=78.53 Aligned_cols=61 Identities=15% Similarity=0.130 Sum_probs=40.5
Q ss_pred HHhhh-hcCCCCeEEEcCcEEEEEEEecCCCC--CCeEEEEEEEeC-CCceeEEeeecCCCcEEEEccCC
Q 008163 216 ADLLE-YANPSGLTLLLHASVHKVLFRIKGKA--RPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGA 281 (575)
Q Consensus 216 ~~~l~-~~~~~g~~v~~~~~V~~l~~~~~~~~--~~~v~GV~~~~~-~g~~~~v~~~~~aa~~VVlAaG~ 281 (575)
..|+. .+++.+..|..+++|++|..+..+.. .....-|.+.+. .|+..++. ++.||+|+|.
T Consensus 148 ~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~-----ar~vVlatG~ 212 (501)
T 4b63_A 148 EDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARR-----TRKVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEE-----EEEEEECCCC
T ss_pred HHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEE-----eCEEEECcCC
Confidence 34666 56666778999999999988654211 112345666543 35555554 7999999994
No 123
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.67 E-value=1.2e-05 Score=86.10 Aligned_cols=40 Identities=38% Similarity=0.424 Sum_probs=36.3
Q ss_pred CcccEEEECCCcchhHHHHhhcC-C-CeEEEEeccCCCCCCC
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ-N-ASVLLLERGGSPYGNP 85 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~-G-~~VlvLE~G~~~~~~~ 85 (575)
..+||||||+|++|+++|++|++ | .+|+|||+.+..++..
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCce
Confidence 46899999999999999999999 9 9999999998877644
No 124
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.66 E-value=2.2e-05 Score=83.30 Aligned_cols=40 Identities=30% Similarity=0.404 Sum_probs=36.4
Q ss_pred CCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCCCCC
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYGN 84 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~~~~ 84 (575)
...+||+|||+|++|+++|++|++ |.+|+|||+.+..++.
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~ 49 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGR 49 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCc
Confidence 447899999999999999999999 9999999999887664
No 125
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.66 E-value=1.5e-05 Score=79.39 Aligned_cols=35 Identities=29% Similarity=0.499 Sum_probs=32.0
Q ss_pred CCCcccEEEECCCcchhHHHHhhcC-CCeEEEEecc
Q 008163 44 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 44 ~~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
|+.+|||+|||+|++|+++|..|++ |++|+|+|+.
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 48 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKA 48 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCC
Confidence 4557999999999999999999999 9999999995
No 126
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.65 E-value=1.8e-05 Score=83.76 Aligned_cols=36 Identities=28% Similarity=0.414 Sum_probs=33.3
Q ss_pred CcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
++|||||||+|++|+++|.+|++ |++|+|+|++...
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~ 38 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGK 38 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCcc
Confidence 46999999999999999999999 9999999998743
No 127
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.65 E-value=0.0001 Score=80.10 Aligned_cols=36 Identities=25% Similarity=0.528 Sum_probs=32.2
Q ss_pred CCcccEEEECCCcchhHHHHhhcC---CCeEEEEeccCC
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGS 80 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~---G~~VlvLE~G~~ 80 (575)
+...||||||+|++|+++|.+|++ |.+|+|+|+.+.
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~ 72 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEY 72 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSC
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCC
Confidence 346899999999999999999997 689999999864
No 128
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.64 E-value=1.5e-05 Score=83.79 Aligned_cols=39 Identities=28% Similarity=0.373 Sum_probs=35.4
Q ss_pred CcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCCCCC
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYGN 84 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~~~~ 84 (575)
.++||||||+|++|+++|++|++ |++|+|||+.+..++.
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~ 43 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGR 43 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCc
Confidence 46899999999999999999999 9999999999876653
No 129
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.63 E-value=2.1e-05 Score=80.58 Aligned_cols=36 Identities=31% Similarity=0.299 Sum_probs=32.8
Q ss_pred CcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
..+||||||+|++|+++|..|++ |.+|+|+|+....
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~ 46 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSEL 46 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCC
Confidence 46999999999999999999999 9999999998654
No 130
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.62 E-value=1.7e-05 Score=83.72 Aligned_cols=37 Identities=32% Similarity=0.444 Sum_probs=33.4
Q ss_pred CcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCCC
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPY 82 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~~ 82 (575)
.+|||||||+|++|+++|.+|++ |++|+|+||.+..+
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~G 40 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELG 40 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSS
T ss_pred ccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCC
Confidence 46999999999999999999999 99999999776543
No 131
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.60 E-value=3e-05 Score=82.61 Aligned_cols=41 Identities=27% Similarity=0.333 Sum_probs=35.4
Q ss_pred CCCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCCCCC
Q 008163 44 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYGN 84 (575)
Q Consensus 44 ~~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~~~~ 84 (575)
|...+||||||+|++|+++|++|++ |++|+|||+.+..++.
T Consensus 10 ~~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~ 51 (504)
T 1sez_A 10 HSSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGK 51 (504)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSS
T ss_pred cCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCc
Confidence 3457999999999999999999999 9999999999887653
No 132
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.60 E-value=2.4e-05 Score=79.17 Aligned_cols=31 Identities=16% Similarity=0.272 Sum_probs=29.9
Q ss_pred cEEEECCCcchhHHHHhhcC-C------CeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-N------ASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G------~~VlvLE~G~ 79 (575)
||||||+|++|+++|++|++ | .+|+|||++.
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 89999999999999999999 9 8999999985
No 133
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.60 E-value=2.8e-05 Score=79.01 Aligned_cols=40 Identities=28% Similarity=0.379 Sum_probs=35.6
Q ss_pred CCCcccEEEECCCcchhHHHHhhcC-CCeEEEEecc-CCCCC
Q 008163 44 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG-GSPYG 83 (575)
Q Consensus 44 ~~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G-~~~~~ 83 (575)
+...+||+|||+|++|+++|++|++ |++|+|+|+. ...++
T Consensus 41 ~~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGG 82 (376)
T 2e1m_A 41 PGPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGG 82 (376)
T ss_dssp CCSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBT
T ss_pred CCCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCC
Confidence 3457899999999999999999999 9999999999 66554
No 134
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.59 E-value=2.6e-05 Score=82.18 Aligned_cols=33 Identities=27% Similarity=0.419 Sum_probs=31.3
Q ss_pred CcccEEEECCCcchhHHHHhhcC-CCeEEEEecc
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
.+|||||||+|++|+++|.+|++ |++|+|+|++
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~ 37 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEF 37 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 36999999999999999999999 9999999994
No 135
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.59 E-value=0.00018 Score=76.05 Aligned_cols=33 Identities=42% Similarity=0.731 Sum_probs=30.5
Q ss_pred ccEEEECCCcchhHHHHhhcC---CCeEEEEeccCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGS 80 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~---G~~VlvLE~G~~ 80 (575)
+||||||+|++|+++|.+|++ |.+|+|+|+.+.
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~ 72 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEI 72 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSC
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 699999999999999999998 789999999854
No 136
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.57 E-value=2.8e-05 Score=78.94 Aligned_cols=38 Identities=29% Similarity=0.276 Sum_probs=33.4
Q ss_pred CCCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 44 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 44 ~~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
++..|||+|||+|++|+++|..|++ |++|+|||+.+..
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~ 49 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQL 49 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 4457999999999999999999999 9999999998654
No 137
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.56 E-value=0.00017 Score=73.90 Aligned_cols=36 Identities=17% Similarity=0.242 Sum_probs=31.9
Q ss_pred CCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
.++..|+|||+|++|+.+|..|.. +.+|+|+|+.+.
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~ 43 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKY 43 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSS
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCC
Confidence 456889999999999999999977 899999999864
No 138
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.56 E-value=3.1e-05 Score=81.79 Aligned_cols=37 Identities=27% Similarity=0.425 Sum_probs=33.7
Q ss_pred ccEEEECCCcchhHHHHhhcC-CC--eEEEEeccCCCCCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NA--SVLLLERGGSPYGN 84 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~--~VlvLE~G~~~~~~ 84 (575)
+||||||+|++|+++|++|++ |. +|+|||+.+..++.
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~ 42 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGW 42 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTT
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCc
Confidence 699999999999999999999 98 99999998776543
No 139
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.55 E-value=2.3e-05 Score=82.94 Aligned_cols=37 Identities=32% Similarity=0.599 Sum_probs=33.0
Q ss_pred CCCCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 43 QPVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 43 ~~~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
+++..|||||||+|++|+++|.+|++ |++|+|+|++.
T Consensus 16 ~~~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~ 53 (478)
T 3dk9_A 16 GAVASYDYLVIGGGSGGLASARRAAELGARAAVVESHK 53 (478)
T ss_dssp -CEEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred ccCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 34457999999999999999999999 99999999874
No 140
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.53 E-value=2.6e-05 Score=81.35 Aligned_cols=33 Identities=30% Similarity=0.323 Sum_probs=31.0
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.+||||||+|++|+++|+.|++ |.+|+|||+..
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 4899999999999999999999 99999999985
No 141
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.52 E-value=3.1e-05 Score=77.36 Aligned_cols=34 Identities=44% Similarity=0.702 Sum_probs=32.1
Q ss_pred CCcccEEEECCCcchhHHHHhhcC-CCeEEEEecc
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
...+||+|||+|++|+++|..|++ |++|+|+|+.
T Consensus 6 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 40 (325)
T 2q7v_A 6 AHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG 40 (325)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC
Confidence 447999999999999999999999 9999999998
No 142
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.52 E-value=3.7e-05 Score=81.22 Aligned_cols=37 Identities=30% Similarity=0.398 Sum_probs=33.9
Q ss_pred cccEEEECCCcchhHHHHhhcC-C--CeEEEEeccCCCCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-N--ASVLLLERGGSPYG 83 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G--~~VlvLE~G~~~~~ 83 (575)
.+||||||+|++|+++|++|++ | .+|+|||+.+..++
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG 43 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGG 43 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBT
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCc
Confidence 5899999999999999999999 9 99999999876544
No 143
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.52 E-value=3.8e-05 Score=81.33 Aligned_cols=40 Identities=28% Similarity=0.379 Sum_probs=35.2
Q ss_pred CCCcccEEEECCCcchhHHHHhhcC-C-CeEEEEeccCCCCC
Q 008163 44 PVSYYDYIIIGGGTAGCPLAATLSQ-N-ASVLLLERGGSPYG 83 (575)
Q Consensus 44 ~~~~~DvIIVGsG~aG~~~A~~La~-G-~~VlvLE~G~~~~~ 83 (575)
+...+||+|||+|++|+++|++|++ | .+|+|+|+.+..++
T Consensus 6 ~~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG 47 (484)
T 4dsg_A 6 ELLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGG 47 (484)
T ss_dssp -CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSG
T ss_pred cccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCC
Confidence 3457999999999999999999999 8 89999999987654
No 144
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.51 E-value=2.7e-05 Score=82.70 Aligned_cols=33 Identities=36% Similarity=0.490 Sum_probs=31.6
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.|||||||+|++|+++|.+|++ |++|+|+|++.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 5999999999999999999999 99999999975
No 145
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.50 E-value=3.4e-05 Score=81.76 Aligned_cols=34 Identities=38% Similarity=0.463 Sum_probs=31.6
Q ss_pred CCcccEEEECCCcchhHHHHhhcC-CCeEEEEecc
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
+.+|||||||+|++|+++|.+|++ |++|+|+||+
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 457999999999999999999999 9999999964
No 146
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.49 E-value=3.7e-05 Score=81.70 Aligned_cols=38 Identities=34% Similarity=0.479 Sum_probs=35.0
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCCCCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYGN 84 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~~~~ 84 (575)
++||||||+|++|+++|++|++ |++|+|||+.+..++.
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr 77 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGR 77 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTT
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCc
Confidence 4999999999999999999999 9999999999877654
No 147
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.48 E-value=4.2e-05 Score=81.81 Aligned_cols=34 Identities=38% Similarity=0.652 Sum_probs=31.8
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
+||+||||+|++|.++|.++++ |+||+|+|+...
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~ 76 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKP 76 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecccc
Confidence 5999999999999999999999 999999998653
No 148
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.47 E-value=5.7e-05 Score=77.42 Aligned_cols=37 Identities=19% Similarity=0.390 Sum_probs=34.2
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCCCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYG 83 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~~~ 83 (575)
++||+|||+|++|+++|++|++ |.+|+|+|+.+..++
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG 40 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGG 40 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCC
Confidence 5899999999999999999999 999999999877654
No 149
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.46 E-value=4.6e-05 Score=79.97 Aligned_cols=35 Identities=31% Similarity=0.529 Sum_probs=32.1
Q ss_pred CCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
...|||||||+|++|+++|.+|++ |++|+|+|++.
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (450)
T 1ges_A 2 TKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE 37 (450)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC
Confidence 347999999999999999999999 99999999984
No 150
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.46 E-value=4.3e-05 Score=80.48 Aligned_cols=35 Identities=31% Similarity=0.551 Sum_probs=32.5
Q ss_pred CCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
++.|||||||+|++|+++|.+|++ |++|+|+|++.
T Consensus 2 ~~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (463)
T 2r9z_A 2 TQHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA 37 (463)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 357999999999999999999999 99999999984
No 151
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.43 E-value=5.1e-05 Score=68.66 Aligned_cols=32 Identities=38% Similarity=0.715 Sum_probs=30.9
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
||++|||+|++|+.+|..|++ |.+|+|+|+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 799999999999999999999 99999999986
No 152
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.43 E-value=5.7e-05 Score=79.64 Aligned_cols=35 Identities=31% Similarity=0.387 Sum_probs=32.6
Q ss_pred CCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
+..|||||||+|++|+++|.+|++ |++|+|+|++.
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~ 37 (467)
T 1zk7_A 2 EPPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGT 37 (467)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 457999999999999999999999 99999999983
No 153
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.43 E-value=7.2e-05 Score=80.07 Aligned_cols=65 Identities=17% Similarity=0.278 Sum_probs=46.5
Q ss_pred hhhhcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCCcCcHH-HHHhhc
Q 008163 218 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQ-LLMLSG 292 (575)
Q Consensus 218 ~l~~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~~~sp~-lLl~Sg 292 (575)
+....++.|++++++++|++|..++++ +++++.+...+|+ .++. ++.||+|+|..-+.. +|..+|
T Consensus 261 l~~~l~~~GV~i~~~~~V~~i~~~~~~----~v~~~~v~~~~G~-~~i~-----aD~Vv~A~G~~p~~~~~l~~~g 326 (523)
T 1mo9_A 261 VLDRMKEQGMEIISGSNVTRIEEDANG----RVQAVVAMTPNGE-MRIE-----TDFVFLGLGEQPRSAELAKILG 326 (523)
T ss_dssp HHHHHHHTTCEEESSCEEEEEEECTTS----BEEEEEEEETTEE-EEEE-----CSCEEECCCCEECCHHHHHHHT
T ss_pred HHHHHHhCCcEEEECCEEEEEEEcCCC----ceEEEEEEECCCc-EEEE-----cCEEEECcCCccCCccCHHHcC
Confidence 334556779999999999999875543 6666666654664 2454 799999999766666 566666
No 154
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.42 E-value=4.6e-05 Score=80.75 Aligned_cols=38 Identities=26% Similarity=0.456 Sum_probs=33.8
Q ss_pred CCCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 44 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 44 ~~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
|+.+|||||||+|++|+++|.+|++ |++|+|+|+.+..
T Consensus 3 m~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~ 41 (482)
T 1ojt_A 3 ADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTL 41 (482)
T ss_dssp SEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 3447999999999999999999999 9999999997544
No 155
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.40 E-value=5e-05 Score=80.54 Aligned_cols=34 Identities=26% Similarity=0.471 Sum_probs=31.6
Q ss_pred CcccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.+|||||||+|++|+++|.+|++ |++|+|+|+..
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~ 39 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVE 39 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecc
Confidence 47999999999999999999999 99999999843
No 156
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.39 E-value=5.5e-05 Score=80.04 Aligned_cols=35 Identities=37% Similarity=0.681 Sum_probs=32.2
Q ss_pred CCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
+.+|||||||+|++|+++|.+|++ |++|+|+|++.
T Consensus 9 ~~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~ 44 (479)
T 2hqm_A 9 TKHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA 44 (479)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC
T ss_pred cccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 347999999999999999999999 99999999974
No 157
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.39 E-value=4.3e-05 Score=80.89 Aligned_cols=36 Identities=33% Similarity=0.447 Sum_probs=32.9
Q ss_pred CcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
.+|||||||+|++|+++|.+|++ |++|+|+|+.+..
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~ 40 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKL 40 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCc
Confidence 46999999999999999999999 9999999996543
No 158
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.38 E-value=4.4e-05 Score=75.88 Aligned_cols=33 Identities=24% Similarity=0.347 Sum_probs=31.0
Q ss_pred CcccEEEECCCcchhHHHHhhcC-CCeEEEEecc
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
..+||+|||+|++|+++|..|++ |++|+|+|+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC
Confidence 46999999999999999999999 9999999965
No 159
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.38 E-value=0.00029 Score=72.73 Aligned_cols=31 Identities=23% Similarity=0.403 Sum_probs=29.0
Q ss_pred cEEEECCCcchhHHHHhhcC----CCeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ----NASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~----G~~VlvLE~G~ 79 (575)
||||||+|++|+++|.+|++ |.+|+|+|+.+
T Consensus 3 ~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~ 37 (409)
T 3h8l_A 3 KVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSR 37 (409)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCC
Confidence 79999999999999999987 69999999985
No 160
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.38 E-value=0.00044 Score=71.98 Aligned_cols=56 Identities=14% Similarity=0.287 Sum_probs=41.1
Q ss_pred hcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCCcCcHHHHHhhc
Q 008163 221 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 292 (575)
Q Consensus 221 ~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~~~sp~lLl~Sg 292 (575)
..++.|+++++++.|+++. .+ ++.+.+.+|...++. ++.||+++|.-. +.++..++
T Consensus 209 ~l~~~GV~~~~~~~v~~v~--~~--------~~~~~~~~g~~~~i~-----~d~vi~~~G~~~-~~~~~~~~ 264 (430)
T 3hyw_A 209 LFAERNIDWIANVAVKAIE--PD--------KVIYEDLNGNTHEVP-----AKFTMFMPSFQG-PEVVASAG 264 (430)
T ss_dssp HHHHTTCEEECSCEEEEEC--SS--------EEEEECTTSCEEEEE-----CSEEEEECEEEC-CHHHHTTC
T ss_pred HHHhCCeEEEeCceEEEEe--CC--------ceEEEeeCCCceEee-----cceEEEeccCCC-chHHHhcc
Confidence 5566799999999999973 33 455665567666775 799999999644 46666665
No 161
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.36 E-value=8.9e-05 Score=78.22 Aligned_cols=37 Identities=30% Similarity=0.396 Sum_probs=33.9
Q ss_pred CcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCCC
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPY 82 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~~ 82 (575)
+.|||||||+|++|+++|.+|++ |++|+|+|+.+..+
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~G 42 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALG 42 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcc
Confidence 46999999999999999999999 99999999986544
No 162
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.36 E-value=7.9e-05 Score=79.20 Aligned_cols=40 Identities=30% Similarity=0.409 Sum_probs=35.9
Q ss_pred CCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCCCCC
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYGN 84 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~~~~ 84 (575)
...+||||||+|++|+++|+.|++ |.+|+|||+.+..++.
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~ 71 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGR 71 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCc
Confidence 446899999999999999999999 9999999999876653
No 163
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.33 E-value=8.4e-05 Score=78.37 Aligned_cols=35 Identities=29% Similarity=0.521 Sum_probs=32.7
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
+|||||||+|++|+++|.+|++ |++|+|+|+.+..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~ 37 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGAL 37 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 5999999999999999999999 9999999998654
No 164
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.33 E-value=0.00031 Score=75.88 Aligned_cols=33 Identities=33% Similarity=0.571 Sum_probs=30.1
Q ss_pred ccEEEECCCcchhHHHHhhcC---CCeEEEEeccCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGS 80 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~---G~~VlvLE~G~~ 80 (575)
.||+|||+|++|+++|.+|++ +.+|+|+|+.+.
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~ 37 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEY 37 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCC
Confidence 379999999999999999998 589999999865
No 165
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.32 E-value=6.1e-05 Score=75.56 Aligned_cols=35 Identities=29% Similarity=0.373 Sum_probs=32.1
Q ss_pred CCCcccEEEECCCcchhHHHHhhcC-CCeEEEEecc
Q 008163 44 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 44 ~~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
++..+||+|||+|++|+++|..|++ |++|+|+|+.
T Consensus 11 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 46 (335)
T 2a87_A 11 HHPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT 46 (335)
T ss_dssp CCCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Confidence 4557999999999999999999999 9999999965
No 166
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.29 E-value=7.5e-05 Score=78.64 Aligned_cols=33 Identities=39% Similarity=0.589 Sum_probs=31.8
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
+|||||||+|++|+++|.+|++ |++|+|+|+..
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 6999999999999999999999 99999999986
No 167
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.28 E-value=9.8e-05 Score=77.55 Aligned_cols=35 Identities=29% Similarity=0.470 Sum_probs=32.4
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
+|||||||+|++|+++|.+|++ |++|+|+|+.+..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~ 36 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKAL 36 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 4899999999999999999999 9999999998644
No 168
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.28 E-value=7.5e-05 Score=78.67 Aligned_cols=32 Identities=28% Similarity=0.480 Sum_probs=31.0
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEecc
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
+|||||||+|++|+++|.+|++ |.+|+|+|+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 5999999999999999999999 9999999998
No 169
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.26 E-value=0.0001 Score=74.10 Aligned_cols=34 Identities=29% Similarity=0.300 Sum_probs=31.9
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
+||||||+|.+|+.+|+.|++ |.+|+|+|+.+..
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~ 36 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKR 36 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTS
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCc
Confidence 699999999999999999999 9999999998753
No 170
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.26 E-value=9.8e-05 Score=77.98 Aligned_cols=36 Identities=22% Similarity=0.291 Sum_probs=33.2
Q ss_pred CcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
..|||||||+|++|+++|.+|++ |++|+|+|+.+..
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~ 41 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETL 41 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCc
Confidence 36999999999999999999999 9999999998654
No 171
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.26 E-value=0.00011 Score=72.60 Aligned_cols=31 Identities=29% Similarity=0.463 Sum_probs=29.4
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEec
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLER 77 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~ 77 (575)
+|||+|||+|++|+++|.+|++ |++|+|+|+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~ 32 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGE 32 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC
Confidence 4899999999999999999999 999999985
No 172
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.26 E-value=0.00016 Score=80.16 Aligned_cols=40 Identities=25% Similarity=0.295 Sum_probs=35.7
Q ss_pred CCCCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCCC
Q 008163 43 QPVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPY 82 (575)
Q Consensus 43 ~~~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~~ 82 (575)
+....+||+|||+|++|+.+|+.|++ |++|+|+|+++..+
T Consensus 387 ~~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~G 427 (690)
T 3k30_A 387 AKESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLG 427 (690)
T ss_dssp CCSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSC
T ss_pred cccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCC
Confidence 34567999999999999999999999 99999999987654
No 173
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.25 E-value=0.00015 Score=79.54 Aligned_cols=37 Identities=35% Similarity=0.534 Sum_probs=33.5
Q ss_pred CCcccEEEECCCcchhHHHHhhcC--CCeEEEEeccCCC
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSP 81 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~--G~~VlvLE~G~~~ 81 (575)
..++||||||+|++|+++|+.|++ |.+|+||||.+..
T Consensus 30 ~~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~ 68 (639)
T 2dkh_A 30 PSQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGP 68 (639)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSC
T ss_pred CCCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 357999999999999999999998 8999999998643
No 174
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.24 E-value=0.00011 Score=78.05 Aligned_cols=33 Identities=42% Similarity=0.728 Sum_probs=31.5
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
+|||||||+|++|+++|.+|++ |++|+|+|++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4999999999999999999999 99999999985
No 175
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.23 E-value=0.00014 Score=78.61 Aligned_cols=41 Identities=32% Similarity=0.336 Sum_probs=37.6
Q ss_pred CCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCCCCCC
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYGNP 85 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~~~~~ 85 (575)
..+|||||||+|..|+++|..|++ |++||+|||.+..+++.
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~ 47 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNW 47 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGG
T ss_pred CCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCcc
Confidence 347999999999999999999999 99999999999988753
No 176
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.22 E-value=6.2e-05 Score=75.31 Aligned_cols=32 Identities=25% Similarity=0.294 Sum_probs=30.5
Q ss_pred CcccEEEECCCcchhHHHHhhcC-CCeEEEEec
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLER 77 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~ 77 (575)
..+||+|||+|++|+++|+.|++ |++|+|+|+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEec
Confidence 46999999999999999999999 999999998
No 177
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.22 E-value=0.00019 Score=75.15 Aligned_cols=38 Identities=24% Similarity=0.168 Sum_probs=34.4
Q ss_pred CCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCCC
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPY 82 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~~ 82 (575)
...+||+|||||++|+++|..|++ |++|+|+|+.+..+
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~G 158 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMG 158 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCC
Confidence 356899999999999999999999 99999999987654
No 178
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.21 E-value=0.00015 Score=77.78 Aligned_cols=35 Identities=34% Similarity=0.546 Sum_probs=31.7
Q ss_pred CcccEEEECCCcchhHHHHhhcC----CCeEEEEeccCC
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ----NASVLLLERGGS 80 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~----G~~VlvLE~G~~ 80 (575)
..+||||||+|++|+++|+.|++ |.+|+|||+...
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 42 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAI 42 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence 46899999999999999999987 799999999754
No 179
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.19 E-value=0.00012 Score=76.91 Aligned_cols=32 Identities=25% Similarity=0.485 Sum_probs=31.0
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEecc
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
+|||||||+|++|+++|.+|++ |++|+|+|+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 35 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG 35 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 5999999999999999999999 9999999998
No 180
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.19 E-value=0.00014 Score=74.83 Aligned_cols=33 Identities=33% Similarity=0.448 Sum_probs=30.5
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
.|+|||+|++|+++|..|++ |.+|+|+||.+..
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 69999999999999999999 9999999997543
No 181
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.18 E-value=0.00014 Score=76.67 Aligned_cols=39 Identities=28% Similarity=0.378 Sum_probs=34.0
Q ss_pred CcccEEEECCCcchhHHHHhhcC-CC-eEEEEeccCCCCCC
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGGSPYGN 84 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~-G~-~VlvLE~G~~~~~~ 84 (575)
..+||+|||+|++|+++|++|++ |. +|+|+|+++..++.
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~ 43 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGR 43 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCc
Confidence 36899999999999999999999 98 89999999876653
No 182
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.17 E-value=0.00014 Score=76.39 Aligned_cols=33 Identities=30% Similarity=0.419 Sum_probs=31.1
Q ss_pred CcccEEEECCCcchhHHHHhhcC-CCeEEEEecc
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
..|||||||+|++|+++|.+|++ |++|+|+|++
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 37 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ 37 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccC
Confidence 36999999999999999999999 9999999994
No 183
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.04 E-value=0.00032 Score=75.51 Aligned_cols=36 Identities=33% Similarity=0.447 Sum_probs=32.1
Q ss_pred CCcccEEEECCCcchhHHHHhhcC----CCeEEEEeccCC
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ----NASVLLLERGGS 80 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~----G~~VlvLE~G~~ 80 (575)
+..+||||||+|++|+++|..|++ |.+|+|||+...
T Consensus 23 ~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 62 (550)
T 2e4g_A 23 GKIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDI 62 (550)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCC
Confidence 357999999999999999999987 589999999754
No 184
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.03 E-value=0.00029 Score=72.09 Aligned_cols=60 Identities=10% Similarity=0.054 Sum_probs=42.1
Q ss_pred hhhhcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCCcCcHHHHHhhc
Q 008163 218 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 292 (575)
Q Consensus 218 ~l~~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~~~sp~lLl~Sg 292 (575)
+....++.|++++++++|++|..+++ . ..|.+ .+|+. +. ++.||+|+|..-+..++..+|
T Consensus 193 l~~~l~~~gv~i~~~~~v~~i~~~~~-----~-~~v~~--~~g~~--i~-----~d~vv~a~G~~p~~~l~~~~g 252 (384)
T 2v3a_A 193 VQAGLEGLGVRFHLGPVLASLKKAGE-----G-LEAHL--SDGEV--IP-----CDLVVSAVGLRPRTELAFAAG 252 (384)
T ss_dssp HHHHHHTTTCEEEESCCEEEEEEETT-----E-EEEEE--TTSCE--EE-----ESEEEECSCEEECCHHHHHTT
T ss_pred HHHHHHHcCCEEEeCCEEEEEEecCC-----E-EEEEE--CCCCE--EE-----CCEEEECcCCCcCHHHHHHCC
Confidence 34456678999999999999987654 2 23333 36643 43 699999999766666766665
No 185
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=96.99 E-value=0.00029 Score=72.00 Aligned_cols=33 Identities=27% Similarity=0.471 Sum_probs=30.4
Q ss_pred cEEEECCCcchhHHHHhhcC---CCeEEEEeccCCC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ---NASVLLLERGGSP 81 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~---G~~VlvLE~G~~~ 81 (575)
||||||+|++|+++|..|++ |.+|+|+||.+..
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 89999999999999999997 7999999998653
No 186
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=96.96 E-value=0.00043 Score=76.22 Aligned_cols=39 Identities=33% Similarity=0.360 Sum_probs=35.5
Q ss_pred CCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCCCC
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYG 83 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~~~ 83 (575)
...+||+|||+|++|+++|+.|++ |++|+|+|+.+..++
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg 144 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 144 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBT
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 457899999999999999999999 999999999887654
No 187
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=96.96 E-value=0.00027 Score=76.96 Aligned_cols=34 Identities=29% Similarity=0.488 Sum_probs=31.7
Q ss_pred CCcccEEEECCCcchhHHHHhhcC-CCeEEEEecc
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
...|||||||+|++|+++|.+|++ |++|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 457999999999999999999999 9999999984
No 188
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=96.94 E-value=0.00039 Score=73.68 Aligned_cols=31 Identities=23% Similarity=0.502 Sum_probs=29.5
Q ss_pred CcccEEEECCCcchhHHHHhhcC--CCeEEEEe
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ--NASVLLLE 76 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~--G~~VlvLE 76 (575)
.+|||||||+|++|+++|++|++ |++|+|+|
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE 34 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVID 34 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEE
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 36999999999999999999998 99999999
No 189
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=96.94 E-value=0.00028 Score=74.89 Aligned_cols=34 Identities=18% Similarity=0.366 Sum_probs=30.9
Q ss_pred CCCcccEEEECCCcchhHHHHhhcC--CCeEEEEec
Q 008163 44 PVSYYDYIIIGGGTAGCPLAATLSQ--NASVLLLER 77 (575)
Q Consensus 44 ~~~~~DvIIVGsG~aG~~~A~~La~--G~~VlvLE~ 77 (575)
|...|||||||+|++|+++|.+|++ |++|+|+|+
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 3447999999999999999999998 999999993
No 190
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.89 E-value=0.00059 Score=75.31 Aligned_cols=39 Identities=23% Similarity=0.357 Sum_probs=35.0
Q ss_pred CCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCCCC
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYG 83 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~~~ 83 (575)
...+||+|||+|++|+.+|..|++ |++|+|+|+.+..++
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg 410 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGG 410 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCC
Confidence 446999999999999999999999 999999999876543
No 191
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=96.89 E-value=0.0067 Score=61.08 Aligned_cols=58 Identities=16% Similarity=0.150 Sum_probs=42.9
Q ss_pred CCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCCcCcHHHHHhhc
Q 008163 225 SGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 292 (575)
Q Consensus 225 ~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~~~sp~lLl~Sg 292 (575)
.|++++++++|++|..+++ ++.+|.+...+|+..++. ++.||+|+|.--++.+|..++
T Consensus 215 ~gv~i~~~~~v~~i~~~~~-----~v~~v~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~l~~~~ 272 (360)
T 3ab1_A 215 GTIDVYLETEVASIEESNG-----VLTRVHLRSSDGSKWTVE-----ADRLLILIGFKSNLGPLARWD 272 (360)
T ss_dssp TSEEEESSEEEEEEEEETT-----EEEEEEEEETTCCEEEEE-----CSEEEECCCBCCSCGGGGGSS
T ss_pred CceEEEcCcCHHHhccCCC-----ceEEEEEEecCCCeEEEe-----CCEEEECCCCCCCHHHHHhhc
Confidence 5799999999999988766 788888874466555554 799999999654444554433
No 192
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=96.83 E-value=0.00071 Score=75.98 Aligned_cols=39 Identities=33% Similarity=0.360 Sum_probs=35.5
Q ss_pred CCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCCCC
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYG 83 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~~~ 83 (575)
...+||+|||+|++|+++|+.|++ |++|+|+|+.+..++
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG 315 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 315 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCC
Confidence 456899999999999999999999 999999999987665
No 193
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.82 E-value=0.00061 Score=75.81 Aligned_cols=39 Identities=23% Similarity=0.308 Sum_probs=35.0
Q ss_pred CCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCCCC
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPYG 83 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~~~ 83 (575)
...+||+|||+|++|+.+|..|++ |++|+|+|+.+..++
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG 426 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGG 426 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCC
Confidence 456899999999999999999999 999999999876543
No 194
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=96.80 E-value=0.0062 Score=64.91 Aligned_cols=33 Identities=12% Similarity=0.321 Sum_probs=30.4
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~ 248 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEP 248 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCc
Confidence 579999999999999999999 999999998864
No 195
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=96.77 E-value=0.0054 Score=62.54 Aligned_cols=33 Identities=21% Similarity=0.417 Sum_probs=30.5
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
-+++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 179 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQ 179 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcc
Confidence 479999999999999999999 999999999864
No 196
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.77 E-value=0.00065 Score=69.03 Aligned_cols=34 Identities=32% Similarity=0.522 Sum_probs=31.0
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
..||||||+|++|+.+|.+|++ | +|+|+|+.+..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCC
Confidence 3699999999999999999999 9 99999998753
No 197
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=96.75 E-value=0.00047 Score=75.87 Aligned_cols=34 Identities=32% Similarity=0.612 Sum_probs=31.5
Q ss_pred cccEEEECCCcchhHHHHhhcC------CCeEEEEeccCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ------NASVLLLERGGS 80 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~------G~~VlvLE~G~~ 80 (575)
++||+|||+|++|+++|..|++ |.+|+||||.+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~ 47 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRST 47 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCC
Confidence 6999999999999999999987 899999999854
No 198
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=96.75 E-value=0.00069 Score=70.86 Aligned_cols=36 Identities=28% Similarity=0.370 Sum_probs=32.4
Q ss_pred cccEEEECCCcchhHHHHhhcC---CCeEEEEeccCCCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGSPY 82 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~---G~~VlvLE~G~~~~ 82 (575)
.+||||||+|++|+++|.+|++ |.+|+|+|+.+...
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~ 41 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVS 41 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccc
Confidence 5899999999999999999998 57999999998643
No 199
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=96.75 E-value=0.00051 Score=72.96 Aligned_cols=33 Identities=27% Similarity=0.495 Sum_probs=30.6
Q ss_pred cccEEEECCCcchhHHHHhhcC----CCeEEEEeccC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ----NASVLLLERGG 79 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~----G~~VlvLE~G~ 79 (575)
.|||||||+|++|+++|.+|++ |++|+|+|++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 4899999999999999999986 68999999986
No 200
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=96.74 E-value=0.00056 Score=72.47 Aligned_cols=35 Identities=11% Similarity=0.289 Sum_probs=32.4
Q ss_pred cccEEEECCCcchhHHHHhhcC-C---CeEEEEeccCCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-N---ASVLLLERGGSP 81 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G---~~VlvLE~G~~~ 81 (575)
++||||||+|++|+++|.+|++ | .+|+|+|+.+..
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~ 73 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNI 73 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCC
Confidence 5999999999999999999999 8 999999998743
No 201
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=96.74 E-value=0.0071 Score=59.66 Aligned_cols=55 Identities=15% Similarity=0.147 Sum_probs=40.6
Q ss_pred CCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeC-C-CceeEEeeecCCCcEEEEccCCcCcHHH
Q 008163 223 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-T-GAKHRAYLKNGPKNEIIVSAGALGSPQL 287 (575)
Q Consensus 223 ~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~-~-g~~~~v~~~~~aa~~VVlAaG~~~sp~l 287 (575)
++.|++++++++|++|..+++ ++.+|.+.+. + |+..++. ++.||+|+|.--++.+
T Consensus 195 ~~~gv~i~~~~~v~~i~~~~~-----~v~~v~~~~~~~~g~~~~i~-----~D~vv~a~G~~p~~~~ 251 (320)
T 1trb_A 195 ENGNIILHTNRTLEEVTGDQM-----GVTGVRLRDTQNSDNIESLD-----VAGLFVAIGHSPNTAI 251 (320)
T ss_dssp HTSSEEEECSCEEEEEEECSS-----SEEEEEEECCTTCCCCEEEE-----CSEEEECSCEEESCGG
T ss_pred ccCCeEEEcCceeEEEEcCCC-----ceEEEEEEeccCCCceEEEE-----cCEEEEEeCCCCChHH
Confidence 346899999999999987665 7888988742 2 5445554 7999999996544443
No 202
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=96.73 E-value=0.0051 Score=60.45 Aligned_cols=54 Identities=24% Similarity=0.319 Sum_probs=40.5
Q ss_pred CCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEeeecCCCcEEEEccCCcCcHHHH
Q 008163 225 SGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLL 288 (575)
Q Consensus 225 ~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~-~~g~~~~v~~~~~aa~~VVlAaG~~~sp~lL 288 (575)
.|++++++++|++|..+++ ++.+|++.+ .+|+..++. ++.||+|+|..-++.+|
T Consensus 193 ~gv~v~~~~~v~~i~~~~~-----~v~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~l 247 (310)
T 1fl2_A 193 KNVDIILNAQTTEVKGDGS-----KVVGLEYRDRVSGDIHNIE-----LAGIFVQIGLLPNTNWL 247 (310)
T ss_dssp TTEEEESSEEEEEEEESSS-----SEEEEEEEETTTCCEEEEE-----CSEEEECSCEEESCGGG
T ss_pred CCeEEecCCceEEEEcCCC-----cEEEEEEEECCCCcEEEEE-----cCEEEEeeCCccCchHH
Confidence 5899999999999986655 788998886 346555564 79999999965444443
No 203
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=96.67 E-value=0.00083 Score=71.17 Aligned_cols=60 Identities=18% Similarity=0.215 Sum_probs=43.2
Q ss_pred hhhhcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCCcCcHHHHHhhc
Q 008163 218 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 292 (575)
Q Consensus 218 ~l~~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~~~sp~lLl~Sg 292 (575)
+....++.|+++++++.|++|..+++ ++ .|.. .+|+. +. ++.||+|+|..-++.++..+|
T Consensus 232 ~~~~l~~~GV~v~~~~~V~~i~~~~~-----~~-~v~l--~dG~~--i~-----aD~Vv~a~G~~pn~~l~~~~g 291 (493)
T 1m6i_A 232 TMEKVRREGVKVMPNAIVQSVGVSSG-----KL-LIKL--KDGRK--VE-----TDHIVAAVGLEPNVELAKTGG 291 (493)
T ss_dssp HHHHHHTTTCEEECSCCEEEEEEETT-----EE-EEEE--TTSCE--EE-----ESEEEECCCEEECCTTHHHHT
T ss_pred HHHHHHhcCCEEEeCCEEEEEEecCC-----eE-EEEE--CCCCE--EE-----CCEEEECCCCCccHHHHHHcC
Confidence 33456678999999999999986654 43 4444 36643 43 699999999876666777676
No 204
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=96.67 E-value=0.00087 Score=69.17 Aligned_cols=36 Identities=17% Similarity=0.249 Sum_probs=32.2
Q ss_pred CcccEEEECCCcchhHHHHhhcC-CC--eEEEEeccCCC
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ-NA--SVLLLERGGSP 81 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~-G~--~VlvLE~G~~~ 81 (575)
..+||||||+|++|+.+|.+|++ |. +|+|+|+.+..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~ 44 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAER 44 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCC
Confidence 46999999999999999999999 86 59999998753
No 205
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=96.64 E-value=0.00077 Score=70.57 Aligned_cols=34 Identities=21% Similarity=0.190 Sum_probs=31.2
Q ss_pred ccEEEECCCcchhHHHHhhcC---CCeEEEEeccCCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGSP 81 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~---G~~VlvLE~G~~~ 81 (575)
|||||||+|++|+++|.+|++ |.+|+|+|+.+..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNI 37 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 699999999999999999987 7999999998753
No 206
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.62 E-value=0.00067 Score=77.85 Aligned_cols=36 Identities=31% Similarity=0.455 Sum_probs=33.4
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPY 82 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~~ 82 (575)
.|||||||+|++|+.+|.+|++ |++|+|+|+.+..+
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~G 164 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAG 164 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 5899999999999999999999 99999999987654
No 207
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=96.59 E-value=0.00096 Score=69.87 Aligned_cols=35 Identities=23% Similarity=0.348 Sum_probs=31.9
Q ss_pred ccEEEECCCcchhHHHHhhcC---CCeEEEEeccCCCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGSPY 82 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~---G~~VlvLE~G~~~~ 82 (575)
.||||||+|++|+++|.+|++ |.+|+|+|+++..+
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g 40 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVG 40 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCc
Confidence 599999999999999999998 68999999998654
No 208
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=96.57 E-value=0.0053 Score=60.65 Aligned_cols=57 Identities=19% Similarity=0.331 Sum_probs=41.6
Q ss_pred CCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEeeecCCCcEEEEccCCcCcHHHHHhh
Q 008163 225 SGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLS 291 (575)
Q Consensus 225 ~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~-~~g~~~~v~~~~~aa~~VVlAaG~~~sp~lLl~S 291 (575)
.|++++++++|++|..+++ ++.+|.+.+ .+|+..++. ++.||+|+|..-++.+|..+
T Consensus 203 ~gv~i~~~~~v~~i~~~~~-----~v~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~l~~~ 260 (319)
T 3cty_A 203 RNIPYIMNAQVTEIVGDGK-----KVTGVKYKDRTTGEEKLIE-----TDGVFIYVGLIPQTSFLKDS 260 (319)
T ss_dssp TTCCEECSEEEEEEEESSS-----SEEEEEEEETTTCCEEEEC-----CSEEEECCCEEECCGGGTTS
T ss_pred CCcEEEcCCeEEEEecCCc-----eEEEEEEEEcCCCceEEEe-----cCEEEEeeCCccChHHHhhc
Confidence 4788999999999987654 688888875 256555554 79999999965555555433
No 209
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.47 E-value=0.0013 Score=68.88 Aligned_cols=36 Identities=28% Similarity=0.384 Sum_probs=33.1
Q ss_pred cccEEEECCCcchhHHHHhhcC-C--CeEEEEeccCCCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-N--ASVLLLERGGSPY 82 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G--~~VlvLE~G~~~~ 82 (575)
.+||+|||+|++|+.+|..|++ | .+|+|+|+.+...
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~g 44 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPF 44 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSC
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCC
Confidence 5899999999999999999999 8 9999999987654
No 210
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.47 E-value=0.0012 Score=69.00 Aligned_cols=36 Identities=31% Similarity=0.414 Sum_probs=32.5
Q ss_pred cccEEEECCCcchhHHHHhhcC--------CCeEEEEeccCCCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ--------NASVLLLERGGSPY 82 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~--------G~~VlvLE~G~~~~ 82 (575)
.+||+|||+|++|+.+|..|++ |.+|+|+|+.+...
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~g 46 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPW 46 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCC
Confidence 5899999999999999999987 89999999987543
No 211
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=96.44 E-value=0.013 Score=61.51 Aligned_cols=33 Identities=30% Similarity=0.476 Sum_probs=30.3
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 203 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPE 203 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCc
Confidence 479999999999999999999 999999998854
No 212
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.43 E-value=0.00085 Score=71.08 Aligned_cols=37 Identities=41% Similarity=0.438 Sum_probs=32.9
Q ss_pred CcccEEEECCCcchhHHHHhhcCCCeEEEEeccCCCC
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQNASVLLLERGGSPY 82 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~G~~VlvLE~G~~~~ 82 (575)
..+||+|||+|++|+++|.+|++.++|+|+|+++..+
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~~~V~vie~~~~~G 143 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQYLTVALIEERGWLG 143 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTTCCEEEECTTSSSS
T ss_pred ccCCEEEECccHHHHHHHHHHHhcCCEEEEeCCCCCC
Confidence 3589999999999999999998768999999997654
No 213
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=96.41 E-value=0.018 Score=56.40 Aligned_cols=55 Identities=13% Similarity=0.084 Sum_probs=40.7
Q ss_pred CCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEeeecCCCcEEEEccCCcCcHHHHH
Q 008163 225 SGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 289 (575)
Q Consensus 225 ~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~-~~g~~~~v~~~~~aa~~VVlAaG~~~sp~lLl 289 (575)
.|+++++++.|+++..+++ ++.+|.+.+ .+|+..++. ++.||+|+|..-+..+|.
T Consensus 192 ~gv~v~~~~~v~~i~~~~~-----~v~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~l~ 247 (311)
T 2q0l_A 192 DKIEFLTPYVVEEIKGDAS-----GVSSLSIKNTATNEKRELV-----VPGFFIFVGYDVNNAVLK 247 (311)
T ss_dssp TTEEEETTEEEEEEEEETT-----EEEEEEEEETTTCCEEEEE-----CSEEEECSCEEECCGGGB
T ss_pred CCeEEEeCCEEEEEECCCC-----cEeEEEEEecCCCceEEEe-----cCEEEEEecCccChhhhh
Confidence 5899999999999987655 777888874 256555564 799999999654444443
No 214
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=96.40 E-value=0.0014 Score=68.44 Aligned_cols=34 Identities=21% Similarity=0.363 Sum_probs=31.0
Q ss_pred ccEEEECCCcchhHHHHhhcC---CCeEEEEeccCCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGSP 81 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~---G~~VlvLE~G~~~ 81 (575)
+||||||+|++|+++|.+|++ |.+|+|+|+.+..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFI 37 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCcc
Confidence 489999999999999999998 7899999998754
No 215
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.39 E-value=0.0015 Score=75.58 Aligned_cols=37 Identities=16% Similarity=0.209 Sum_probs=33.4
Q ss_pred CcccEEEECCCcchhHHHHhhcC-CC-eEEEEeccCCCC
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGGSPY 82 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~-G~-~VlvLE~G~~~~ 82 (575)
..+||+|||||++|+++|.+|++ |+ +|+|+|+.+..+
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~G 224 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVG 224 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCC
Confidence 46899999999999999999999 98 799999986554
No 216
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=96.36 E-value=0.011 Score=61.67 Aligned_cols=33 Identities=30% Similarity=0.504 Sum_probs=30.2
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
-.++|||+|.+|+-+|..|++ |.+|.|+|+++.
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~ 201 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDR 201 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCc
Confidence 469999999999999999999 999999998854
No 217
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=96.25 E-value=0.0018 Score=67.18 Aligned_cols=34 Identities=24% Similarity=0.381 Sum_probs=31.2
Q ss_pred ccEEEECCCcchhHHHHhhcC---CCeEEEEeccCCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGSP 81 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~---G~~VlvLE~G~~~ 81 (575)
.||||||+|++|+++|.+|++ |.+|+|+|+.+..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~ 39 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYF 39 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCC
Confidence 689999999999999999998 5899999998754
No 218
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=96.19 E-value=0.026 Score=55.96 Aligned_cols=32 Identities=25% Similarity=0.427 Sum_probs=29.6
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
-.++|||+|..|+-+|..|++ |.+|.++++++
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~ 185 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTARRITLIHRRP 185 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCC
Confidence 479999999999999999999 99999999874
No 219
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.17 E-value=0.026 Score=58.80 Aligned_cols=33 Identities=30% Similarity=0.587 Sum_probs=30.4
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
-+++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 204 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAGE 204 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 579999999999999999999 999999998853
No 220
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.17 E-value=0.0018 Score=70.85 Aligned_cols=36 Identities=28% Similarity=0.408 Sum_probs=32.9
Q ss_pred CcccEEEECCCcchhHHHHhhcC-C--------CeEEEEeccC-CC
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ-N--------ASVLLLERGG-SP 81 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~-G--------~~VlvLE~G~-~~ 81 (575)
...+|+|||+|++|+++|++|++ | .+|+|+|+.+ ..
T Consensus 55 ~~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 55 GNYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 35899999999999999999999 8 9999999997 55
No 221
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=96.14 E-value=0.026 Score=59.21 Aligned_cols=33 Identities=27% Similarity=0.419 Sum_probs=30.2
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 217 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQ 217 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCc
Confidence 469999999999999999999 999999999864
No 222
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=96.11 E-value=0.0029 Score=65.88 Aligned_cols=34 Identities=26% Similarity=0.429 Sum_probs=31.0
Q ss_pred ccEEEECCCcchhHHHHhhcC----CCeEEEEeccCCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ----NASVLLLERGGSP 81 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~----G~~VlvLE~G~~~ 81 (575)
.||||||+|++|+++|..|++ |.+|+|+|+.+..
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~ 42 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYF 42 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCC
Confidence 699999999999999999987 6899999999753
No 223
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=96.10 E-value=0.025 Score=59.22 Aligned_cols=33 Identities=27% Similarity=0.341 Sum_probs=29.7
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
-.++|||+|..|+-+|..|++ |.+|.|+|+.+.
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~ 200 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDR 200 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCc
Confidence 369999999999999999999 999999998753
No 224
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=96.08 E-value=0.02 Score=59.93 Aligned_cols=33 Identities=27% Similarity=0.474 Sum_probs=29.7
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 208 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPR 208 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCc
Confidence 468999999999999999999 999999998854
No 225
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=96.08 E-value=0.027 Score=59.39 Aligned_cols=33 Identities=27% Similarity=0.462 Sum_probs=29.4
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 232 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDT 232 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecccc
Confidence 368999999999999999999 999999998854
No 226
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=96.01 E-value=0.0092 Score=62.27 Aligned_cols=33 Identities=21% Similarity=0.315 Sum_probs=29.9
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 201 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDA 201 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCc
Confidence 479999999999999999999 999999998853
No 227
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=95.95 E-value=0.023 Score=59.96 Aligned_cols=33 Identities=30% Similarity=0.461 Sum_probs=30.0
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 208 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGS 208 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCc
Confidence 469999999999999999999 999999998864
No 228
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.87 E-value=0.02 Score=59.81 Aligned_cols=33 Identities=24% Similarity=0.447 Sum_probs=30.4
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 205 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARER 205 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCc
Confidence 479999999999999999999 999999999854
No 229
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=95.86 E-value=0.0055 Score=64.90 Aligned_cols=36 Identities=11% Similarity=0.206 Sum_probs=32.5
Q ss_pred CCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 45 VSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 45 ~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
.++..|||||+|.+|+.+|.+|++ +++|+|||+.+.
T Consensus 40 ~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 40 SDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp CSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 345789999999999999999999 999999999864
No 230
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=95.85 E-value=0.036 Score=54.71 Aligned_cols=52 Identities=13% Similarity=0.280 Sum_probs=38.3
Q ss_pred CCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEeeecCCCcEEEEccCCcCcHHH
Q 008163 225 SGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQL 287 (575)
Q Consensus 225 ~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~-~~g~~~~v~~~~~aa~~VVlAaG~~~sp~l 287 (575)
.|++++++++|++|..+ + ++.+|.+.+ .+|+..++. ++.||+|+|.--+..+
T Consensus 201 ~gv~i~~~~~v~~i~~~-~-----~v~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~ 253 (325)
T 2q7v_A 201 PKMKFIWDTAVEEIQGA-D-----SVSGVKLRNLKTGEVSELA-----TDGVFIFIGHVPNTAF 253 (325)
T ss_dssp TTEEEECSEEEEEEEES-S-----SEEEEEEEETTTCCEEEEE-----CSEEEECSCEEESCGG
T ss_pred CCceEecCCceEEEccC-C-----cEEEEEEEECCCCcEEEEE-----cCEEEEccCCCCChHH
Confidence 58999999999999764 3 677888875 256655564 7999999985433333
No 231
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=95.83 E-value=0.012 Score=62.03 Aligned_cols=33 Identities=24% Similarity=0.458 Sum_probs=29.1
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 219 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIRGET 219 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCc
Confidence 369999999999999999999 999999998854
No 232
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=95.74 E-value=0.042 Score=57.62 Aligned_cols=33 Identities=27% Similarity=0.352 Sum_probs=29.7
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 214 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDK 214 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Confidence 469999999999999999999 999999998853
No 233
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=95.70 E-value=0.042 Score=57.31 Aligned_cols=35 Identities=20% Similarity=0.298 Sum_probs=30.6
Q ss_pred cccEEEECCCcchhHHHHhhcC---CCeEEEEeccCCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ---NASVLLLERGGSP 81 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~---G~~VlvLE~G~~~ 81 (575)
.-.|+|||+|..|+-+|..|++ +.+|.+++|.+..
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~ 264 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASAL 264 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSC
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCC
Confidence 4579999999999999999987 5799999998653
No 234
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=95.68 E-value=0.0058 Score=63.55 Aligned_cols=33 Identities=12% Similarity=0.459 Sum_probs=29.4
Q ss_pred cEEEECCCcchhHHHHhhcC-C--CeEEEEeccCCC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-N--ASVLLLERGGSP 81 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G--~~VlvLE~G~~~ 81 (575)
.|||||+|++|+++|.+|++ | .+|+|+|+.+..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~ 37 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDM 37 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 48999999999999999998 7 579999998653
No 235
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=95.61 E-value=0.047 Score=56.82 Aligned_cols=33 Identities=33% Similarity=0.415 Sum_probs=30.2
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 183 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQNYNVNLIDGHER 183 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCc
Confidence 369999999999999999999 999999998854
No 236
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=95.59 E-value=0.026 Score=59.08 Aligned_cols=33 Identities=24% Similarity=0.311 Sum_probs=30.0
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 205 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPR 205 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCc
Confidence 469999999999999999999 999999998854
No 237
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=95.57 E-value=0.035 Score=58.23 Aligned_cols=33 Identities=27% Similarity=0.423 Sum_probs=29.9
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 212 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGH 212 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCc
Confidence 469999999999999999999 999999998854
No 238
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=95.56 E-value=0.015 Score=61.18 Aligned_cols=34 Identities=35% Similarity=0.562 Sum_probs=30.8
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
.-+++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 220 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDH 220 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGG
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCc
Confidence 4579999999999999999999 999999998853
No 239
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=95.52 E-value=0.0058 Score=62.61 Aligned_cols=33 Identities=27% Similarity=0.507 Sum_probs=29.1
Q ss_pred cEEEECCCcchhHHHHhhcC-C--CeEEEEeccCCC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-N--ASVLLLERGGSP 81 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G--~~VlvLE~G~~~ 81 (575)
.|||||+|++|+++|.+|.+ + .+|+|||+.+..
T Consensus 4 kVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~ 39 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETY 39 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSE
T ss_pred EEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCC
Confidence 49999999999999999987 4 699999998754
No 240
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.52 E-value=0.04 Score=58.25 Aligned_cols=33 Identities=18% Similarity=0.344 Sum_probs=29.6
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 210 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGNR 210 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecCCc
Confidence 369999999999999999999 999999998854
No 241
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=95.50 E-value=0.042 Score=56.40 Aligned_cols=34 Identities=35% Similarity=0.467 Sum_probs=30.9
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
.-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 179 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPR 179 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCc
Confidence 3579999999999999999999 999999999854
No 242
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=95.48 E-value=0.051 Score=58.33 Aligned_cols=32 Identities=25% Similarity=0.443 Sum_probs=29.9
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
.++|||+|..|+-+|..|++ |.+|.++|+.+.
T Consensus 153 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 185 (565)
T 3ntd_A 153 HATVVGGGFIGLEMMESLHHLGIKTTLLELADQ 185 (565)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCc
Confidence 79999999999999999999 999999999854
No 243
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=95.44 E-value=0.043 Score=57.98 Aligned_cols=33 Identities=15% Similarity=0.400 Sum_probs=27.9
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 216 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDH 216 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCc
Confidence 468899999999999988888 889999988753
No 244
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=95.39 E-value=0.036 Score=58.25 Aligned_cols=33 Identities=24% Similarity=0.385 Sum_probs=30.3
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
-.++|||+|..|+-+|..|++ |.+|.|+|+.+.
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~ 219 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDG 219 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCc
Confidence 479999999999999999999 999999998854
No 245
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.31 E-value=0.042 Score=57.47 Aligned_cols=33 Identities=18% Similarity=0.392 Sum_probs=29.9
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~ 211 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASE 211 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 469999999999999999999 999999998854
No 246
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=95.27 E-value=0.12 Score=51.08 Aligned_cols=56 Identities=13% Similarity=0.159 Sum_probs=39.8
Q ss_pred CCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeC-CCceeEEeeecCCCcEEEEccCCcCcHHH
Q 008163 224 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQL 287 (575)
Q Consensus 224 ~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~-~g~~~~v~~~~~aa~~VVlAaG~~~sp~l 287 (575)
+.|++++++++|+++..++++ .++.+|.+.+. +|+..++. ++.||+|+|.--+..+
T Consensus 207 ~~gv~i~~~~~v~~i~~~~~~---~~v~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~ 263 (333)
T 1vdc_A 207 NPKIDVIWNSSVVEAYGDGER---DVLGGLKVKNVVTGDVSDLK-----VSGLFFAIGHEPATKF 263 (333)
T ss_dssp CTTEEEECSEEEEEEEESSSS---SSEEEEEEEETTTCCEEEEE-----CSEEEECSCEEESCGG
T ss_pred CCCeeEecCCceEEEeCCCCc---cceeeEEEEecCCCceEEEe-----cCEEEEEeCCccchHH
Confidence 468999999999999865431 15677888752 46555564 7999999996544443
No 247
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=95.21 E-value=0.046 Score=59.05 Aligned_cols=33 Identities=27% Similarity=0.460 Sum_probs=30.1
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 221 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMANQ 221 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCc
Confidence 469999999999999999999 999999998854
No 248
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=95.18 E-value=0.074 Score=55.83 Aligned_cols=55 Identities=16% Similarity=0.204 Sum_probs=37.4
Q ss_pred CCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCC-CceeEEeeecCCCcEEEEccCCcCcHHHH
Q 008163 224 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDAT-GAKHRAYLKNGPKNEIIVSAGALGSPQLL 288 (575)
Q Consensus 224 ~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~-g~~~~v~~~~~aa~~VVlAaG~~~sp~lL 288 (575)
+.|+++++++.|.+|..++++ ++ .|.+.+.. ++..++. ++.||+|+|.--+..+|
T Consensus 239 ~~Gv~i~~~~~v~~i~~~~~~----~~-~v~~~~~~~~~~~~~~-----~D~vi~a~G~~p~~~~l 294 (483)
T 3dgh_A 239 ERGIPFLRKTVPLSVEKQDDG----KL-LVKYKNVETGEESEDV-----YDTVLWAIGRKGLVDDL 294 (483)
T ss_dssp HTTCCEEETEEEEEEEECTTS----CE-EEEEEETTTCCEEEEE-----ESEEEECSCEEECCGGG
T ss_pred hCCCEEEeCCEEEEEEEcCCC----cE-EEEEecCCCCceeEEE-----cCEEEECcccccCcCcC
Confidence 357889999999999876552 33 46666432 4444554 79999999975554544
No 249
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=95.15 E-value=0.066 Score=55.72 Aligned_cols=33 Identities=21% Similarity=0.284 Sum_probs=30.3
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 181 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLEN 181 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCc
Confidence 469999999999999999999 999999998854
No 250
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=95.12 E-value=0.085 Score=55.49 Aligned_cols=30 Identities=13% Similarity=0.242 Sum_probs=26.7
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEecc
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
.++|||+|..|+-+|..|++ |.+|.++|+.
T Consensus 187 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 217 (488)
T 3dgz_A 187 KTLVVGASYVALECAGFLTGIGLDTTVMMRS 217 (488)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred eEEEECCCHHHHHHHHHHHHcCCceEEEEcC
Confidence 58999999999999999988 9999999875
No 251
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=95.10 E-value=0.12 Score=54.24 Aligned_cols=33 Identities=24% Similarity=0.337 Sum_probs=29.4
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 221 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDK 221 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCc
Confidence 469999999999999999999 999999998754
No 252
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=95.09 E-value=0.041 Score=57.84 Aligned_cols=33 Identities=30% Similarity=0.530 Sum_probs=29.4
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~ 225 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDL 225 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCc
Confidence 479999999999999999999 999999998853
No 253
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=95.00 E-value=0.054 Score=53.33 Aligned_cols=32 Identities=25% Similarity=0.397 Sum_probs=29.4
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
-.++|||+|..|+-+|..|++ |.+|.++++++
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~ 187 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPIAKEVSIIHRRD 187 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTBSEEEEECSSS
T ss_pred CEEEEECCCHhHHHHHHHHHhhCCeEEEEEecC
Confidence 469999999999999999999 99999998874
No 254
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=94.70 E-value=0.038 Score=57.74 Aligned_cols=33 Identities=24% Similarity=0.388 Sum_probs=28.9
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
-.++|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 171 ~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~ 204 (463)
T 4dna_A 171 ESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKE 204 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCc
Confidence 468999999999999999998 999999998753
No 255
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=94.10 E-value=0.19 Score=53.37 Aligned_cols=31 Identities=13% Similarity=0.168 Sum_probs=28.6
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEecc
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
-.++|||+|+.|+=.|..++. |.+|.|+++.
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~ 255 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSLGYDVTVAVRS 255 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEESS
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCeEEEeccc
Confidence 469999999999999999999 9999999875
No 256
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=94.03 E-value=0.14 Score=53.88 Aligned_cols=50 Identities=24% Similarity=0.347 Sum_probs=34.3
Q ss_pred CCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCCcCcHH
Q 008163 223 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQ 286 (575)
Q Consensus 223 ~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~~~sp~ 286 (575)
++.|++++++++|++|..+++ ....|++ .+|+ ++. ++.||+|+|..-+..
T Consensus 242 ~~~GV~i~~~~~v~~i~~~~~-----~~~~v~~--~~G~--~i~-----~D~vv~a~G~~p~~~ 291 (490)
T 1fec_A 242 RANGINVRTHENPAKVTKNAD-----GTRHVVF--ESGA--EAD-----YDVVMLAIGRVPRSQ 291 (490)
T ss_dssp HHTTEEEEETCCEEEEEECTT-----SCEEEEE--TTSC--EEE-----ESEEEECSCEEESCT
T ss_pred HhCCCEEEeCCEEEEEEEcCC-----CEEEEEE--CCCc--EEE-----cCEEEEccCCCcCcc
Confidence 346899999999999987654 2234444 3665 343 699999999654443
No 257
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=93.98 E-value=0.13 Score=54.05 Aligned_cols=32 Identities=34% Similarity=0.461 Sum_probs=27.4
Q ss_pred ccEEEECCCcchhHHHHhhcC-----CCeEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-----NASVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-----G~~VlvLE~G~ 79 (575)
-.++|||+|..|+-+|..|++ |.+|.++|+.+
T Consensus 181 ~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~ 217 (493)
T 1m6i_A 181 KSITIIGGGFLGSELACALGRKARALGTEVIQLFPEK 217 (493)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCc
Confidence 369999999999999999875 57899998774
No 258
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=93.79 E-value=0.16 Score=53.40 Aligned_cols=50 Identities=14% Similarity=0.310 Sum_probs=34.5
Q ss_pred CCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCCcCcHH
Q 008163 223 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQ 286 (575)
Q Consensus 223 ~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~~~sp~ 286 (575)
++.|++++++++|++|..+++ ....|.+ .+|+ ++. ++.||+|+|..-+..
T Consensus 246 ~~~GV~i~~~~~v~~i~~~~~-----~~~~v~~--~~G~--~i~-----~D~vv~a~G~~p~~~ 295 (495)
T 2wpf_A 246 TANGIEIMTNENPAKVSLNTD-----GSKHVTF--ESGK--TLD-----VDVVMMAIGRIPRTN 295 (495)
T ss_dssp HHTTCEEEESCCEEEEEECTT-----SCEEEEE--TTSC--EEE-----ESEEEECSCEEECCG
T ss_pred HhCCCEEEeCCEEEEEEEcCC-----ceEEEEE--CCCc--EEE-----cCEEEECCCCccccc
Confidence 345899999999999987654 2234544 3665 343 699999999654444
No 259
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=93.67 E-value=0.36 Score=51.05 Aligned_cols=30 Identities=17% Similarity=0.276 Sum_probs=26.3
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEecc
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
.++|||+|..|+-+|..|++ |.+|.|+|+.
T Consensus 212 ~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 212 KTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred eEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 58999999999999999988 8899999874
No 260
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=93.07 E-value=0.24 Score=56.67 Aligned_cols=58 Identities=14% Similarity=0.107 Sum_probs=41.4
Q ss_pred CCeEEEcCcEEEEEEEe-cCCCCCCeEEEEEEEe--C---CCceeEEeeecCCCcEEEEccCCcCcHHHHHhhc
Q 008163 225 SGLTLLLHASVHKVLFR-IKGKARPVAHGVVFRD--A---TGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 292 (575)
Q Consensus 225 ~g~~v~~~~~V~~l~~~-~~~~~~~~v~GV~~~~--~---~g~~~~v~~~~~aa~~VVlAaG~~~sp~lLl~Sg 292 (575)
.|++|++++.|++|..+ ++ ++.+|.+.+ . +|+..++. ++.||+|+|..-+..++...+
T Consensus 329 ~GV~v~~~~~v~~i~~~~~~-----~v~~v~~~~~~~~~~~G~~~~i~-----~D~Vv~a~G~~P~~~l~~~~~ 392 (965)
T 2gag_A 329 DGVQVISGSVVVDTEADENG-----ELSAIVVAELDEARELGGTQRFE-----ADVLAVAGGFNPVVHLHSQRQ 392 (965)
T ss_dssp TTCCEEETEEEEEEEECTTS-----CEEEEEEEEECTTCCEEEEEEEE-----CSEEEEECCEEECCHHHHHTT
T ss_pred CCeEEEeCCEeEEEeccCCC-----CEEEEEEEeccccCCCCceEEEE-----cCEEEECCCcCcChHHHHhCC
Confidence 46889999999999764 33 788888875 2 24334554 799999999765666665543
No 261
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=92.77 E-value=0.27 Score=56.62 Aligned_cols=31 Identities=29% Similarity=0.464 Sum_probs=28.4
Q ss_pred cEEEECCCcchhHHHHhhcC-CC-eEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~-~VlvLE~G~ 79 (575)
.|+|||+|..|+=+|..|.+ |. +|.|+++.+
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 79999999999999999998 85 899999874
No 262
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=92.65 E-value=0.29 Score=51.55 Aligned_cols=32 Identities=25% Similarity=0.446 Sum_probs=26.2
Q ss_pred cEEEECCCcchhHHHHhhcC-C--------------CeEEEEeccCC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-N--------------ASVLLLERGGS 80 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G--------------~~VlvLE~G~~ 80 (575)
.++|||+|++|+-+|..|++ + .+|.|+|+++.
T Consensus 219 ~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~ 265 (502)
T 4g6h_A 219 SIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPI 265 (502)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSS
T ss_pred ceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccc
Confidence 59999999999999998875 3 46888887754
No 263
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=92.47 E-value=0.18 Score=55.40 Aligned_cols=33 Identities=18% Similarity=0.189 Sum_probs=29.6
Q ss_pred ccEEEEC--CCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 48 YDYIIIG--GGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 48 ~DvIIVG--sG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
-.|+||| +|..|+-+|..|++ |.+|.++|+.+.
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~ 559 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQ 559 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccc
Confidence 3599999 99999999999999 999999998753
No 264
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=92.00 E-value=0.1 Score=51.12 Aligned_cols=33 Identities=21% Similarity=0.406 Sum_probs=30.7
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
.++|||+|..|+-+|..|++ |.+|.|+|+++..
T Consensus 147 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 147 RLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDEL 180 (312)
T ss_dssp EEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEeccccc
Confidence 69999999999999999999 9999999998754
No 265
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=91.87 E-value=0.083 Score=54.82 Aligned_cols=36 Identities=19% Similarity=0.386 Sum_probs=32.6
Q ss_pred CcccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 46 SYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 46 ~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
...+++|||+|.+|+-+|..|++ |.+|.|+|+++..
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 184 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRP 184 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccc
Confidence 35789999999999999999999 9999999998653
No 266
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=91.14 E-value=0.1 Score=53.01 Aligned_cols=34 Identities=26% Similarity=0.278 Sum_probs=31.4
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
-.|+|||+|..|+-+|..|++ |.+|.|+|+.+..
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~ 181 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYP 181 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc
Confidence 369999999999999999999 9999999999764
No 267
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=90.96 E-value=0.16 Score=43.25 Aligned_cols=32 Identities=19% Similarity=0.398 Sum_probs=29.7
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
=.++|||.|..|..+|..|.+ |.+|+++|+..
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 469999999999999999999 99999999874
No 268
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=90.91 E-value=0.12 Score=44.86 Aligned_cols=33 Identities=24% Similarity=0.357 Sum_probs=29.8
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.-.++|||+|..|..+|..|.+ |.+|+++++..
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3469999999999999999998 99999999864
No 269
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=90.91 E-value=0.11 Score=44.13 Aligned_cols=31 Identities=32% Similarity=0.617 Sum_probs=28.9
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.++|+|+|..|..+|..|.+ |.+|+++|+..
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 59999999999999999999 99999999863
No 270
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=90.56 E-value=0.13 Score=43.29 Aligned_cols=31 Identities=32% Similarity=0.494 Sum_probs=28.5
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEecc
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
..++|||+|..|..+|..|.+ |.+|.++|+.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 359999999999999999999 9999999975
No 271
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=90.39 E-value=0.18 Score=49.19 Aligned_cols=34 Identities=26% Similarity=0.454 Sum_probs=30.9
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
-.++|||+|..|+-+|..|++ |.+|.|+|+....
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~ 187 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAF 187 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeecccccc
Confidence 469999999999999999999 9999999987643
No 272
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=89.67 E-value=0.2 Score=43.30 Aligned_cols=31 Identities=16% Similarity=0.208 Sum_probs=28.8
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEecc
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
-.++|+|+|..|..+|..|.+ |.+|+++|+.
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 459999999999999999998 9999999986
No 273
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=89.38 E-value=0.17 Score=51.01 Aligned_cols=34 Identities=41% Similarity=0.561 Sum_probs=31.2
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
-.++|||+|..|+-+|..|++ |.+|.++|+++..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 178 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMF 178 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCee
Confidence 469999999999999999999 9999999998754
No 274
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=87.90 E-value=0.25 Score=40.11 Aligned_cols=31 Identities=26% Similarity=0.371 Sum_probs=28.3
Q ss_pred cEEEECCCcchhHHHHhhcC-C-CeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-N-ASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G-~~VlvLE~G~ 79 (575)
.++|+|+|..|..+|..|.+ | .+|.++++..
T Consensus 7 ~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 7 NICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 59999999999999999999 8 8999999863
No 275
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=86.96 E-value=0.26 Score=41.66 Aligned_cols=31 Identities=23% Similarity=0.421 Sum_probs=28.3
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.++|+|+|..|..+|..|.+ |.+|.++++..
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 49999999999999999999 99999999753
No 276
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=86.83 E-value=0.53 Score=48.77 Aligned_cols=62 Identities=15% Similarity=0.166 Sum_probs=44.8
Q ss_pred ECCCCccccHHHhhhhcCCCCeEEEcCcEEEEEEEe--cCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCCc
Q 008163 206 FDQNGQRHTAADLLEYANPSGLTLLLHASVHKVLFR--IKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGAL 282 (575)
Q Consensus 206 ~~~~g~r~~~~~~l~~~~~~g~~v~~~~~V~~l~~~--~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~~ 282 (575)
++..|.......+.+.++..|++|+++++|++|..+ ++ ++++|.. +|+ ++. ++.||+|+|.+
T Consensus 236 ~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~-----~~~~V~~---~g~--~~~-----ad~VV~a~~~~ 299 (453)
T 2bcg_G 236 YPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTG-----KFEGVKT---KLG--TFK-----APLVIADPTYF 299 (453)
T ss_dssp EETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTT-----EEEEEEE---TTE--EEE-----CSCEEECGGGC
T ss_pred eeCCCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCC-----eEEEEEE---CCe--EEE-----CCEEEECCCcc
Confidence 345555444444666666779999999999999988 55 8888865 353 343 78999999975
No 277
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=86.60 E-value=0.35 Score=50.75 Aligned_cols=34 Identities=21% Similarity=0.372 Sum_probs=31.1
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
-.++|||+|..|+-+|..|++ |.+|.|+|+++..
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 229 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTC 229 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccch
Confidence 469999999999999999999 9999999998754
No 278
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=86.55 E-value=1.6 Score=47.59 Aligned_cols=52 Identities=15% Similarity=0.197 Sum_probs=35.3
Q ss_pred hcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCCcCcHHHH
Q 008163 221 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLL 288 (575)
Q Consensus 221 ~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~~~sp~lL 288 (575)
..++.|++++++++|+++. ++ +|.+. .+|+..++. ++.||+|+|.--+..++
T Consensus 582 ~l~~~GV~v~~~~~v~~i~--~~--------~v~~~-~~G~~~~i~-----~D~Vi~a~G~~p~~~l~ 633 (671)
T 1ps9_A 582 TLLSRGVKMIPGVSYQKID--DD--------GLHVV-INGETQVLA-----VDNVVICAGQEPNRALA 633 (671)
T ss_dssp HHHHTTCEEECSCEEEEEE--TT--------EEEEE-ETTEEEEEC-----CSEEEECCCEEECCTTH
T ss_pred HHHhcCCEEEeCcEEEEEe--CC--------eEEEe-cCCeEEEEe-----CCEEEECCCccccHHHH
Confidence 4455799999999999985 33 34443 266545553 79999999965444444
No 279
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=86.54 E-value=0.4 Score=49.54 Aligned_cols=33 Identities=18% Similarity=0.361 Sum_probs=30.2
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCe-EEEEeccCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NAS-VLLLERGGS 80 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~-VlvLE~G~~ 80 (575)
-+|+|||+|..|+=+|..|++ +.+ |.|+++++.
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~ 247 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGG 247 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCC
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCC
Confidence 469999999999999999999 988 999999854
No 280
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=86.19 E-value=0.48 Score=50.36 Aligned_cols=33 Identities=18% Similarity=0.282 Sum_probs=31.1
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
-.|+|||+|..|+-+|..|++ +.+|.|++|.+.
T Consensus 179 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 179 RRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 479999999999999999999 999999999976
No 281
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=86.02 E-value=0.46 Score=50.59 Aligned_cols=34 Identities=15% Similarity=0.264 Sum_probs=31.4
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
-.|+|||+|..|+-+|..|++ +.+|.|++|.+.+
T Consensus 186 krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNW 220 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCC
T ss_pred CeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCc
Confidence 469999999999999999999 9999999999763
No 282
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=86.02 E-value=0.34 Score=48.37 Aligned_cols=33 Identities=24% Similarity=0.483 Sum_probs=28.1
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
.|+|||+|..|+-+|..|++ |.+|.++|+++..
T Consensus 168 ~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~ 201 (369)
T 3d1c_A 168 QYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGL 201 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECC----
T ss_pred EEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCC
Confidence 69999999999999999999 9999999998653
No 283
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=85.62 E-value=0.44 Score=49.20 Aligned_cols=34 Identities=15% Similarity=0.262 Sum_probs=31.3
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
-.++|||+|..|+-+|..|++ |.+|.|+|+++..
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l 182 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKI 182 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCC
T ss_pred cEEEEECCccchhhhHHHHHhcCCcceeeeeeccc
Confidence 369999999999999999999 9999999999764
No 284
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=85.22 E-value=0.47 Score=49.38 Aligned_cols=33 Identities=9% Similarity=0.118 Sum_probs=30.3
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
-.|+|||+|..|+=+|..|++ |.+|.++++.+.
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 369999999999999999999 999999998864
No 285
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=84.90 E-value=0.48 Score=49.01 Aligned_cols=34 Identities=29% Similarity=0.545 Sum_probs=31.3
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
-.++|||+|..|+-+|..|++ |.+|.++|+++..
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 183 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERV 183 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc
Confidence 379999999999999999999 9999999998754
No 286
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=84.88 E-value=0.46 Score=48.87 Aligned_cols=34 Identities=35% Similarity=0.514 Sum_probs=31.0
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
-.++|||+|..|+-+|..|++ |.+|.++|+.+..
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~ 184 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARV 184 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcc
Confidence 469999999999999999999 9999999998654
No 287
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=84.65 E-value=0.47 Score=48.86 Aligned_cols=62 Identities=16% Similarity=0.203 Sum_probs=44.5
Q ss_pred ECCCCccccHHHhhhhcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCCc
Q 008163 206 FDQNGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGAL 282 (575)
Q Consensus 206 ~~~~g~r~~~~~~l~~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~~ 282 (575)
++..|.......+.+.+++.|++|+++++|++|..+++ ++++|.. +|+ ++. ++.||+|+|..
T Consensus 228 ~p~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~-----~v~~v~~---~g~--~~~-----ad~VV~a~~~~ 289 (433)
T 1d5t_A 228 YPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIMENG-----KVVGVKS---EGE--VAR-----CKQLICDPSYV 289 (433)
T ss_dssp EETTCTTHHHHHHHHHHHHHTCCCBCSCCCCEEEEETT-----EEEEEEE---TTE--EEE-----CSEEEECGGGC
T ss_pred EeCcCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEeCC-----EEEEEEE---CCe--EEE-----CCEEEECCCCC
Confidence 44556443333455556667999999999999998876 8888763 454 343 79999999975
No 288
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=84.53 E-value=0.49 Score=48.30 Aligned_cols=35 Identities=37% Similarity=0.630 Sum_probs=31.6
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
.-.++|||+|..|+-+|..|++ |.+|.++|+.+..
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~ 178 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDEL 178 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcc
Confidence 3479999999999999999999 9999999998654
No 289
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=84.50 E-value=0.66 Score=45.66 Aligned_cols=33 Identities=33% Similarity=0.478 Sum_probs=30.5
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
-.++|||+|..|+-+|..|++ |.+|.++++.+.
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~ 189 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDE 189 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCc
Confidence 479999999999999999999 999999998864
No 290
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=84.15 E-value=1.3 Score=47.81 Aligned_cols=64 Identities=16% Similarity=0.162 Sum_probs=46.2
Q ss_pred eEECCCCccccHHHhhhhcCCCCeEEEcCcEEEEEEEecC-CCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccC
Q 008163 204 TIFDQNGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIK-GKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAG 280 (575)
Q Consensus 204 ~~~~~~g~r~~~~~~l~~~~~~g~~v~~~~~V~~l~~~~~-~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG 280 (575)
..++..|....+..|.+.++..|.++++++.|.+|+++++ + +++||.. .+|+. +. ++.||..+.
T Consensus 370 ~~yp~GG~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g----~v~gV~~--~~Ge~--i~-----A~~VVs~~~ 434 (650)
T 1vg0_A 370 FLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESR----KCKAVID--QFGQR--II-----SKHFIIEDS 434 (650)
T ss_dssp EEEETTCTTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTC----CEEEEEE--TTSCE--EE-----CSEEEEEGG
T ss_pred eEEeCCchhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCC----eEEEEEe--CCCCE--EE-----cCEEEEChh
Confidence 3445566555555577777788999999999999999873 3 8999873 36764 33 688887555
No 291
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=83.98 E-value=0.4 Score=44.14 Aligned_cols=31 Identities=29% Similarity=0.479 Sum_probs=28.5
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.++|||+|..|..+|..|.+ |.+|+++|+..
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 38999999999999999999 99999999764
No 292
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=83.86 E-value=1.1 Score=44.97 Aligned_cols=34 Identities=26% Similarity=0.460 Sum_probs=30.7
Q ss_pred cccEEEECCCcchhHHHHhhcC-CC-eEEEEeccCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGGS 80 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~-~VlvLE~G~~ 80 (575)
+-.|+|+|+|.+|..+|..|.. |. +|.++|+.+.
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gl 223 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGI 223 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEE
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCc
Confidence 4679999999999999999998 97 9999999863
No 293
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=83.78 E-value=0.54 Score=50.09 Aligned_cols=34 Identities=15% Similarity=0.336 Sum_probs=31.3
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
-.|+|||+|..|+-+|..|++ +.+|.|++|.+.+
T Consensus 192 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 192 KRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANY 226 (549)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCc
Confidence 469999999999999999999 9999999999753
No 294
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=83.55 E-value=0.62 Score=45.60 Aligned_cols=31 Identities=29% Similarity=0.400 Sum_probs=28.7
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.+.|||+|..|+..|..|++ |.+|.++.|..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 4 RIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 58999999999999999999 99999999863
No 295
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=83.52 E-value=0.57 Score=46.02 Aligned_cols=31 Identities=26% Similarity=0.478 Sum_probs=28.8
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.+.|||+|..|+..|..|++ |.+|.++.|..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 4 NILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp EEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 58999999999999999999 99999999864
No 296
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=83.32 E-value=0.75 Score=39.10 Aligned_cols=32 Identities=19% Similarity=0.274 Sum_probs=28.5
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
-.+.|||+|..|..+|..|.+ |.+|.+.++..
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 359999999999999999999 98899998763
No 297
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=83.12 E-value=0.67 Score=45.07 Aligned_cols=31 Identities=26% Similarity=0.519 Sum_probs=28.6
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.|.|||+|..|..+|..|++ |++|.++++..
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 49999999999999999999 99999999763
No 298
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=83.00 E-value=0.62 Score=48.45 Aligned_cols=34 Identities=21% Similarity=0.279 Sum_probs=31.0
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
-.++|||+|..|+-+|..|++ |.+|.++|+++..
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 211 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLGSKVTVLARNTLF 211 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCcc
Confidence 469999999999999999999 9999999998754
No 299
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=82.58 E-value=0.87 Score=44.55 Aligned_cols=34 Identities=29% Similarity=0.522 Sum_probs=31.2
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
-.++|||+|..|+-+|..|++ |.+|.++++++..
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~ 208 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHL 208 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcc
Confidence 469999999999999999999 9999999998754
No 300
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=82.35 E-value=0.59 Score=45.83 Aligned_cols=31 Identities=26% Similarity=0.375 Sum_probs=28.3
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.|.|||+|..|.-.|..++. |++|+|+|..+
T Consensus 8 ~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 8 DVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred eEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 59999999999999999999 99999999753
No 301
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=81.81 E-value=0.76 Score=47.70 Aligned_cols=31 Identities=32% Similarity=0.651 Sum_probs=29.1
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.+||+|+|-.|..+|..|.+ |++|+|+|+..
T Consensus 5 ~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 49999999999999999998 99999999874
No 302
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=81.68 E-value=0.78 Score=46.80 Aligned_cols=34 Identities=35% Similarity=0.461 Sum_probs=31.2
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
-.++|||+|..|+-+|..|++ |.+|.++|+.+..
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~ 187 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRV 187 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCch
Confidence 469999999999999999999 9999999999764
No 303
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=81.45 E-value=0.77 Score=46.66 Aligned_cols=34 Identities=26% Similarity=0.306 Sum_probs=31.1
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
-.++|||+|..|+-+|..|++ |.+|.++|+.+..
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~ 177 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRV 177 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcc
Confidence 469999999999999999999 9999999998754
No 304
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=81.33 E-value=0.74 Score=44.00 Aligned_cols=32 Identities=22% Similarity=0.338 Sum_probs=29.0
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEecc
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
.--|+|||+|-.|...|..|.+ |.+|.|++..
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 3459999999999999999999 9999999865
No 305
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=80.80 E-value=0.83 Score=47.45 Aligned_cols=34 Identities=24% Similarity=0.369 Sum_probs=31.2
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
-.++|||+|..|+-+|..|++ |.+|.++|+++..
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 207 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRA 207 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcC
Confidence 469999999999999999999 9999999998754
No 306
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=80.79 E-value=0.74 Score=49.59 Aligned_cols=30 Identities=20% Similarity=0.318 Sum_probs=28.7
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEecc
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
.++|||+|..|+-+|..|++ |.+|.|+|+.
T Consensus 288 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 288 KTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 69999999999999999999 9999999987
No 307
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=80.16 E-value=1.3 Score=42.39 Aligned_cols=33 Identities=12% Similarity=0.047 Sum_probs=29.8
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
.-.++|||+|..|+-+|..|++ | +|.+++++..
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~ 174 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV 174 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC
Confidence 3579999999999999999999 9 9999998854
No 308
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=80.13 E-value=0.89 Score=42.88 Aligned_cols=35 Identities=23% Similarity=0.378 Sum_probs=30.6
Q ss_pred cccEEEECCCcchhHHHHhhcC-CC-eEEEEeccCCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGGSP 81 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~-~VlvLE~G~~~ 81 (575)
...|+|||+|..|+.+|..|+. |. +|.|+++....
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~ 67 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVS 67 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcc
Confidence 4579999999999999999999 95 89999987543
No 309
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=80.04 E-value=1 Score=43.37 Aligned_cols=31 Identities=16% Similarity=0.255 Sum_probs=28.6
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.|.|||+|..|..+|..|++ |++|.+.++..
T Consensus 6 kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 58999999999999999999 99999998764
No 310
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=80.03 E-value=1 Score=41.55 Aligned_cols=32 Identities=19% Similarity=0.299 Sum_probs=28.7
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEecc
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
.-.|+|||+|-.|...|..|.+ |.+|.|++..
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 4569999999999999999999 9999999753
No 311
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=79.70 E-value=1 Score=41.08 Aligned_cols=33 Identities=15% Similarity=0.264 Sum_probs=29.6
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
..+.|||+|..|...|..|++ |.+|.++++...
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 459999999999999999999 999999987643
No 312
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=79.65 E-value=0.7 Score=44.75 Aligned_cols=31 Identities=32% Similarity=0.437 Sum_probs=28.8
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.+.|||+|..|...|..|++ |.+|.++.|..
T Consensus 4 kI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 4 SVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 48999999999999999999 99999999873
No 313
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=79.44 E-value=0.86 Score=45.07 Aligned_cols=30 Identities=33% Similarity=0.554 Sum_probs=28.2
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEecc
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
.+.|||+|..|+..|..|++ |.+|.+++|.
T Consensus 5 kI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 5 RICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred EEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 58999999999999999999 9999999985
No 314
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=79.39 E-value=1 Score=43.18 Aligned_cols=31 Identities=19% Similarity=0.174 Sum_probs=28.5
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.+.|||+|..|...|..|++ |++|.++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 37899999999999999999 99999998874
No 315
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=79.38 E-value=1.4 Score=43.50 Aligned_cols=37 Identities=22% Similarity=0.550 Sum_probs=32.1
Q ss_pred cccEEEECCCcchhHHHHhhcC-C-CeEEEEeccCCCCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-N-ASVLLLERGGSPYG 83 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G-~~VlvLE~G~~~~~ 83 (575)
...|+|||+|..|+.+|..|+. | .++.|++.......
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve~S 72 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYS 72 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEeccc
Confidence 4679999999999999999999 8 58999998876543
No 316
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=79.29 E-value=0.93 Score=47.90 Aligned_cols=34 Identities=32% Similarity=0.389 Sum_probs=31.1
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
-.|+|||+|..|+-+|..|++ |.+|.++|+++..
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l 390 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEM 390 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCccc
Confidence 379999999999999999999 9999999998654
No 317
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=79.21 E-value=0.98 Score=40.07 Aligned_cols=32 Identities=22% Similarity=0.202 Sum_probs=28.6
Q ss_pred ccEEEECCCcchhHHHHhhcC--CCeEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ--NASVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~--G~~VlvLE~G~ 79 (575)
-.++|||.|..|..+|..|.+ |.+|+++|+..
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 469999999999999999976 89999999864
No 318
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=77.94 E-value=2 Score=42.90 Aligned_cols=34 Identities=24% Similarity=0.367 Sum_probs=30.5
Q ss_pred cccEEEECCCcchhHHHHhhcC-CC-eEEEEeccCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGGS 80 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~-~VlvLE~G~~ 80 (575)
+-.|+|+|+|.+|..+|..|.. |. +|.|+++.+.
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gl 227 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGI 227 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEE
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCc
Confidence 4679999999999999999999 97 8999999754
No 319
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=77.69 E-value=1.2 Score=43.01 Aligned_cols=36 Identities=28% Similarity=0.315 Sum_probs=32.1
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSPY 82 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~~ 82 (575)
.-.++|||+|..|+-+|..|++ |.+|.++++++...
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~ 190 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFK 190 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCC
Confidence 3579999999999999999999 99999999987643
No 320
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=77.64 E-value=1.1 Score=44.48 Aligned_cols=31 Identities=32% Similarity=0.462 Sum_probs=28.5
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEecc
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
-.+.|||+|..|...|..|++ |.+|.++++.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 469999999999999999999 9999999875
No 321
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=77.42 E-value=1.1 Score=46.76 Aligned_cols=33 Identities=27% Similarity=0.414 Sum_probs=29.7
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
...+.|||.|..|+.+|..|++ |++|+++++..
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3568999999999999999999 99999998753
No 322
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=77.37 E-value=1.1 Score=45.70 Aligned_cols=32 Identities=22% Similarity=0.249 Sum_probs=29.6
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
-.|||||.|-.|..+|..|.+ |.+|++||+.+
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 459999999999999999999 99999999874
No 323
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=77.16 E-value=1.2 Score=43.59 Aligned_cols=32 Identities=25% Similarity=0.407 Sum_probs=28.8
Q ss_pred ccEEEECCCcchhHHHHhhcC-CC--eEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NA--SVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~--~VlvLE~G~ 79 (575)
..+.|||+|..|..+|..|++ |. +|.++++..
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 359999999999999999999 88 999999863
No 324
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=77.07 E-value=1.5 Score=43.23 Aligned_cols=32 Identities=19% Similarity=0.245 Sum_probs=29.2
Q ss_pred ccEEEECCCcchhHHHHhhcC-CC-eEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~-~VlvLE~G~ 79 (575)
..+.|||+|..|..+|..|+. |+ +|.++|+..
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 469999999999999999999 87 999999864
No 325
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=77.05 E-value=2.4 Score=44.10 Aligned_cols=59 Identities=17% Similarity=0.222 Sum_probs=38.9
Q ss_pred CCCccccHHHhhhhcCCCC-eEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCC
Q 008163 208 QNGQRHTAADLLEYANPSG-LTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGA 281 (575)
Q Consensus 208 ~~g~r~~~~~~l~~~~~~g-~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~ 281 (575)
..|.......+...+...| ++|+++++|++|..+++ . |.+...+|+. +. ++.||+|+|.
T Consensus 251 ~gG~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~-----~---v~v~~~~g~~--~~-----ad~vI~a~~~ 310 (495)
T 2vvm_A 251 KDGQSAFARRFWEEAAGTGRLGYVFGCPVRSVVNERD-----A---ARVTARDGRE--FV-----AKRVVCTIPL 310 (495)
T ss_dssp TTCHHHHHHHHHHHHHTTTCEEEESSCCEEEEEECSS-----S---EEEEETTCCE--EE-----EEEEEECCCG
T ss_pred CCCHHHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCC-----E---EEEEECCCCE--EE-----cCEEEECCCH
Confidence 4444333333555555566 99999999999987665 3 3344446643 33 7999999995
No 326
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=76.88 E-value=1.5 Score=42.84 Aligned_cols=32 Identities=25% Similarity=0.430 Sum_probs=29.0
Q ss_pred ccEEEECCCcchhHHHHhhcC-CC-eEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~-~VlvLE~G~ 79 (575)
-.+.|||+|..|..+|..|+. |+ +|.++++..
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 469999999999999999999 98 999999864
No 327
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=76.78 E-value=1.2 Score=43.27 Aligned_cols=30 Identities=30% Similarity=0.455 Sum_probs=28.0
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEecc
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
.+.|||+|..|...|..|++ |++|.++++.
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 48999999999999999999 9999999875
No 328
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=76.03 E-value=1.7 Score=41.94 Aligned_cols=34 Identities=21% Similarity=0.351 Sum_probs=31.1
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
-.++|||+|..|+-+|..|++ |.+|.++++.+..
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF 182 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC
Confidence 469999999999999999999 9999999998754
No 329
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=75.30 E-value=1.5 Score=45.01 Aligned_cols=31 Identities=26% Similarity=0.284 Sum_probs=28.2
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.+.|||.|..|+.+|..|++ |++|+++++..
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 37899999999999999999 99999998753
No 330
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=75.28 E-value=1.9 Score=39.20 Aligned_cols=29 Identities=24% Similarity=0.385 Sum_probs=27.2
Q ss_pred EEEEC-CCcchhHHHHhhcC-CCeEEEEecc
Q 008163 50 YIIIG-GGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 50 vIIVG-sG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
+.||| +|..|..+|..|++ |.+|.+++|.
T Consensus 3 i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 3 VALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred EEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 78999 99999999999999 9999999875
No 331
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=75.26 E-value=1.9 Score=42.32 Aligned_cols=31 Identities=26% Similarity=0.449 Sum_probs=28.4
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
-.|+|||+|..|+-+|..|++ | +|.++++..
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 479999999999999999999 8 799999884
No 332
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=75.05 E-value=1.3 Score=41.10 Aligned_cols=32 Identities=16% Similarity=0.111 Sum_probs=28.4
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.-.++|+|.|..|..+|..|.+ |. |+++|+.+
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 3469999999999999999999 99 99999874
No 333
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=74.92 E-value=1.5 Score=44.22 Aligned_cols=34 Identities=24% Similarity=0.255 Sum_probs=30.2
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
.-.|+|||+|..|..+|..|.. |.+|+++|+.+.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4579999999999999999888 999999998753
No 334
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=74.86 E-value=1.5 Score=43.04 Aligned_cols=30 Identities=27% Similarity=0.584 Sum_probs=27.2
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEecc
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
..+.|||+|.-|...|..|++ |.+|.++ +.
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 458999999999999999999 9999998 54
No 335
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=74.84 E-value=2.4 Score=40.90 Aligned_cols=34 Identities=21% Similarity=0.309 Sum_probs=30.4
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
.-.+.|||.|..|...|..|++ |++|.+.++...
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 3569999999999999999999 999999988753
No 336
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=74.81 E-value=1.9 Score=42.93 Aligned_cols=32 Identities=28% Similarity=0.366 Sum_probs=29.4
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
-.+.|||+|.-|...|..|++ |.+|.+.++.+
T Consensus 30 mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 469999999999999999999 99999998863
No 337
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=74.75 E-value=1.5 Score=43.09 Aligned_cols=28 Identities=25% Similarity=0.433 Sum_probs=26.9
Q ss_pred EEEECCCcchhHHHHhhcC-CCeEEEEec
Q 008163 50 YIIIGGGTAGCPLAATLSQ-NASVLLLER 77 (575)
Q Consensus 50 vIIVGsG~aG~~~A~~La~-G~~VlvLE~ 77 (575)
+.|||+|..|...|..|++ |++|.++++
T Consensus 3 I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 3 VSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 7899999999999999999 999999988
No 338
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=74.49 E-value=1.5 Score=41.79 Aligned_cols=31 Identities=23% Similarity=0.364 Sum_probs=28.1
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEecc
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
-.++|+|+|..|..+|..|++ |.+|.|..|.
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 359999999999999999999 9999999775
No 339
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=74.44 E-value=1.4 Score=43.17 Aligned_cols=31 Identities=26% Similarity=0.375 Sum_probs=28.5
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.|.|||+|..|...|..|++ |++|.+.++.+
T Consensus 8 kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 8 DVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred eEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 48999999999999999999 99999998764
No 340
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=74.01 E-value=1.8 Score=44.89 Aligned_cols=31 Identities=26% Similarity=0.369 Sum_probs=28.7
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.|.|||+|..|..+|..|++ |++|+++|+..
T Consensus 39 kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 59999999999999999999 99999998764
No 341
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=73.91 E-value=2.6 Score=44.65 Aligned_cols=36 Identities=22% Similarity=0.562 Sum_probs=31.3
Q ss_pred cccEEEECCCcchhHHHHhhcC-C-CeEEEEeccCCCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-N-ASVLLLERGGSPY 82 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G-~~VlvLE~G~~~~ 82 (575)
...|+|||+|..|+.+|..|+. | .++.|+|......
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~Ve~ 364 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSY 364 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBCCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCcccc
Confidence 3679999999999999999999 8 4899999876544
No 342
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=73.87 E-value=1.6 Score=43.71 Aligned_cols=33 Identities=21% Similarity=0.175 Sum_probs=29.8
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.-.|+|||+|..|..+|..|.. |.+|+++++..
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4579999999999999999988 99999999874
No 343
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=73.49 E-value=1.6 Score=45.10 Aligned_cols=31 Identities=23% Similarity=0.352 Sum_probs=28.8
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.+.|||.|..|+.+|..|++ |++|.++++..
T Consensus 4 kI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 58999999999999999999 99999999864
No 344
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=73.49 E-value=2 Score=44.30 Aligned_cols=32 Identities=19% Similarity=0.213 Sum_probs=29.3
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
-.|.|||.|.+|+++|..|.+ |++|.+.|+..
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 459999999999999999999 99999999874
No 345
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=73.04 E-value=2.1 Score=44.35 Aligned_cols=33 Identities=27% Similarity=0.432 Sum_probs=29.2
Q ss_pred ccEEEECCCcchhHHHHhhc--------------------C-CC-eEEEEeccCC
Q 008163 48 YDYIIIGGGTAGCPLAATLS--------------------Q-NA-SVLLLERGGS 80 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La--------------------~-G~-~VlvLE~G~~ 80 (575)
-.|+|||+|..|+-+|..|+ + |. +|.|+++.+.
T Consensus 146 ~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 146 DTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp SEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 47999999999999999998 6 76 7999999864
No 346
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=72.98 E-value=2.5 Score=37.08 Aligned_cols=55 Identities=18% Similarity=0.072 Sum_probs=37.5
Q ss_pred hhhcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCCcCcHHHHHhhc
Q 008163 219 LEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 292 (575)
Q Consensus 219 l~~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~~~sp~lLl~Sg 292 (575)
...+++.|++++++ +|+++..+++ . +.+...+| ++. ++.||+|+|.. |.++...+
T Consensus 63 ~~~~~~~gv~v~~~-~v~~i~~~~~-----~---~~v~~~~g---~i~-----ad~vI~A~G~~--~~~~~~~g 117 (180)
T 2ywl_A 63 EAHARRYGAEVRPG-VVKGVRDMGG-----V---FEVETEEG---VEK-----AERLLLCTHKD--PTLPSLLG 117 (180)
T ss_dssp HHHHHHTTCEEEEC-CCCEEEECSS-----S---EEEECSSC---EEE-----EEEEEECCTTC--CHHHHHHT
T ss_pred HHHHHHcCCEEEeC-EEEEEEEcCC-----E---EEEEECCC---EEE-----ECEEEECCCCC--CCccccCC
Confidence 33556679999999 9999987655 2 33443355 343 79999999964 45555554
No 347
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=72.74 E-value=2.3 Score=39.97 Aligned_cols=35 Identities=26% Similarity=0.356 Sum_probs=30.4
Q ss_pred cccEEEECCCcchhHHHHhhcC-CC-eEEEEeccCCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGGSP 81 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~-~VlvLE~G~~~ 81 (575)
...|+|||+|..|+.+|..|+. |. ++.|++.....
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~ 64 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVH 64 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcc
Confidence 4679999999999999999999 84 89999887543
No 348
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=72.19 E-value=1.8 Score=44.38 Aligned_cols=33 Identities=15% Similarity=0.151 Sum_probs=29.7
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
-..+.|||.|..|+.+|..||+ |++|+.+|...
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 3579999999999999999999 99999998653
No 349
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=72.18 E-value=1.8 Score=44.85 Aligned_cols=33 Identities=27% Similarity=0.347 Sum_probs=29.1
Q ss_pred ccEEEECCCcchhHHHHhhcC-CC-eEEEEeccCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGGS 80 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~-~VlvLE~G~~ 80 (575)
-.|+|||+|..|+=+|..|.+ |. +|.++++.+.
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDR 299 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCS
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCc
Confidence 469999999999999998888 86 6999998864
No 350
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=71.93 E-value=2.1 Score=41.19 Aligned_cols=36 Identities=22% Similarity=0.377 Sum_probs=30.8
Q ss_pred cccEEEECCCcchhHHHHhhcC-C-CeEEEEeccCCCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-N-ASVLLLERGGSPY 82 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G-~~VlvLE~G~~~~ 82 (575)
...|+|||+|..|+.+|..|+. | .++.|+|......
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve~ 73 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVEL 73 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC--
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccCh
Confidence 5789999999999999999999 8 5899999876543
No 351
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=71.89 E-value=1.9 Score=42.42 Aligned_cols=32 Identities=25% Similarity=0.497 Sum_probs=29.2
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEecc
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
+..+.|||+|.-|...|..|++ |.+|.+++|.
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 3569999999999999999999 9999999875
No 352
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=71.72 E-value=2.4 Score=41.22 Aligned_cols=31 Identities=35% Similarity=0.383 Sum_probs=28.1
Q ss_pred cEEEECCCcchhHHHHhhcCCCeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQNASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~G~~VlvLE~G~ 79 (575)
.+.|||+|..|+..|..|+.|.+|.++.|..
T Consensus 4 kI~IiGaGa~G~~~a~~L~~g~~V~~~~r~~ 34 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLSLYHDVTVVTRRQ 34 (307)
T ss_dssp EEEEECCSHHHHHHHHHHHTTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhcCCceEEEECCH
Confidence 5899999999999999998778999999874
No 353
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=71.66 E-value=1.9 Score=44.63 Aligned_cols=31 Identities=32% Similarity=0.335 Sum_probs=28.3
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEecc
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
--++|+|+|..|..+|..|+. |.+|++.|+.
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~ 297 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEID 297 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 458999999999999999999 9999999875
No 354
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=71.60 E-value=2 Score=43.08 Aligned_cols=32 Identities=31% Similarity=0.441 Sum_probs=28.8
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
-.|+|+|+|..|..+|..|.. |.+|+++++..
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 459999999999999999988 99999998763
No 355
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=71.22 E-value=2.7 Score=43.30 Aligned_cols=32 Identities=31% Similarity=0.476 Sum_probs=29.4
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
-.|.|||+|.-|..+|..|++ |++|++.|+..
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 359999999999999999999 99999999874
No 356
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=71.05 E-value=2 Score=41.71 Aligned_cols=31 Identities=23% Similarity=0.395 Sum_probs=27.8
Q ss_pred cEEEECCCcchhHHHHhhcC-CC--eEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NA--SVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~--~VlvLE~G~ 79 (575)
.+.|||+|..|..+|..|+. |+ .|.++|+..
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 37899999999999999999 87 899998763
No 357
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=71.02 E-value=1.9 Score=43.05 Aligned_cols=31 Identities=26% Similarity=0.392 Sum_probs=28.5
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.+.|||+|..|...|..|++ |++|.++++..
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 59999999999999999999 99999998763
No 358
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=70.99 E-value=2.1 Score=42.77 Aligned_cols=32 Identities=25% Similarity=0.364 Sum_probs=28.8
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
-.|+|+|+|.+|..+|..|.. |.+|.++++..
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 469999999999999999988 99999998863
No 359
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=70.96 E-value=2.1 Score=39.19 Aligned_cols=32 Identities=25% Similarity=0.230 Sum_probs=28.6
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
-.+.|||+|..|...|..|++ |++|.++++..
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 359999999999999999999 99999998763
No 360
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=70.71 E-value=1.7 Score=45.03 Aligned_cols=65 Identities=14% Similarity=0.097 Sum_probs=42.4
Q ss_pred CCCccccHHHhhhhcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCCcCcHHH
Q 008163 208 QNGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQL 287 (575)
Q Consensus 208 ~~g~r~~~~~~l~~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~~~sp~l 287 (575)
..|.......+...+++.|++|+++++|++|..+++ ++..| .. ++.. +. ++.||+|++.....+|
T Consensus 230 ~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~-----~~~~v--~~-~~~~--~~-----ad~vv~a~p~~~~~~l 294 (477)
T 3nks_A 230 RGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAE-----GRWKV--SL-RDSS--LE-----ADHVISAIPASVLSEL 294 (477)
T ss_dssp TTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEECGG-----GCEEE--EC-SSCE--EE-----ESEEEECSCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCC-----ceEEE--EE-CCeE--EE-----cCEEEECCCHHHHHHh
Confidence 455443344455555566999999999999988765 32344 32 3432 33 6999999987555544
No 361
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=70.56 E-value=2.1 Score=43.50 Aligned_cols=33 Identities=21% Similarity=0.275 Sum_probs=29.1
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.-.|+|||+|.+|+.+|..|.. |.+|+++++..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3469999999999999999888 99999998764
No 362
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=70.53 E-value=2.6 Score=40.53 Aligned_cols=29 Identities=28% Similarity=0.536 Sum_probs=26.7
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEecc
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
-++|+|+|..|..+|..|++ | +|.+..|.
T Consensus 130 ~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 130 NIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp EEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 59999999999999999999 9 99999775
No 363
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=70.19 E-value=2.2 Score=40.53 Aligned_cols=33 Identities=30% Similarity=0.533 Sum_probs=29.4
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.-.++|+|+|.+|..+|..|++ |.+|.|+.|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3469999999999999999999 99999998774
No 364
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=70.18 E-value=2.2 Score=47.15 Aligned_cols=32 Identities=16% Similarity=0.098 Sum_probs=29.8
Q ss_pred ccEEEEC--CCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 48 YDYIIIG--GGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVG--sG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
-.|+||| +|..|+-+|..|++ |.+|.|+|+++
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 3699999 99999999999999 99999999987
No 365
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=69.85 E-value=2.9 Score=40.87 Aligned_cols=32 Identities=28% Similarity=0.369 Sum_probs=29.1
Q ss_pred cccEEEECCCcchhHHHHhhcC-CC-eEEEEecc
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERG 78 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~-~VlvLE~G 78 (575)
.-.+.|||+|..|..+|..|+. |+ .|.++|..
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 4569999999999999999999 88 99999986
No 366
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=69.79 E-value=2.7 Score=40.64 Aligned_cols=31 Identities=19% Similarity=0.277 Sum_probs=28.0
Q ss_pred ccEEEECCCcchhHHHHhhcC-CC-eEEEEecc
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERG 78 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~-~VlvLE~G 78 (575)
-.++|||+|.+|..+|..|++ |. +|.|..|.
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 359999999999999999999 96 89999876
No 367
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=69.63 E-value=3 Score=40.76 Aligned_cols=32 Identities=22% Similarity=0.423 Sum_probs=29.1
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
-.+.|||.|..|...|..|++ |++|.+.++..
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 469999999999999999999 99999998763
No 368
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=69.55 E-value=2.5 Score=44.89 Aligned_cols=36 Identities=22% Similarity=0.562 Sum_probs=31.5
Q ss_pred cccEEEECCCcchhHHHHhhcC-C-CeEEEEeccCCCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-N-ASVLLLERGGSPY 82 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G-~~VlvLE~G~~~~ 82 (575)
...|+|||+|..|+.+|..|+. | .++.|+|......
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve~ 363 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSY 363 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCcc
Confidence 4679999999999999999999 8 5899999887644
No 369
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=69.52 E-value=2.5 Score=39.58 Aligned_cols=33 Identities=24% Similarity=0.361 Sum_probs=29.8
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
...+.|||.|..|..+|..|++ |++|.+.++..
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 4569999999999999999999 99999998864
No 370
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=69.42 E-value=3 Score=39.61 Aligned_cols=31 Identities=16% Similarity=0.212 Sum_probs=28.6
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.|+|.|+|..|..++.+|.+ |++|.++.|..
T Consensus 7 ~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 7 TLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp EEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred cEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 49999999999999999999 99999998864
No 371
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=69.38 E-value=2.8 Score=40.52 Aligned_cols=30 Identities=27% Similarity=0.433 Sum_probs=27.8
Q ss_pred cEEEEC-CCcchhHHHHhhcC-CCeEEEEecc
Q 008163 49 DYIIIG-GGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 49 DvIIVG-sG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
.+.||| .|..|...|..|++ |++|.++++.
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~ 54 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRASGYPISILDRE 54 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCEEEECTT
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 499999 99999999999999 9999999865
No 372
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=69.18 E-value=2.3 Score=41.77 Aligned_cols=32 Identities=28% Similarity=0.398 Sum_probs=28.9
Q ss_pred ccEEEECCCcchhHHHHhhcC-CC-eEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~-~VlvLE~G~ 79 (575)
-.+.|||+|..|..+|..|+. |+ +|.++|...
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 369999999999999999999 88 999999863
No 373
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=69.16 E-value=1.9 Score=41.13 Aligned_cols=32 Identities=25% Similarity=0.306 Sum_probs=28.7
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
-.++|+|+|.+|..+|..|++ |.+|.|..|..
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 359999999999999999999 99999998763
No 374
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=68.92 E-value=2.7 Score=40.35 Aligned_cols=31 Identities=32% Similarity=0.491 Sum_probs=28.5
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.+.|||.|..|...|..|++ |++|.+.++..
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 48899999999999999999 99999998764
No 375
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=68.87 E-value=2.8 Score=41.13 Aligned_cols=32 Identities=25% Similarity=0.426 Sum_probs=28.5
Q ss_pred ccEEEECCCcchhHHHHhhcC-CC-eEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~-~VlvLE~G~ 79 (575)
..+.|||+|..|..+|..|+. |+ +|.++|...
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 369999999999999999999 87 899999753
No 376
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=68.83 E-value=2.2 Score=43.94 Aligned_cols=32 Identities=16% Similarity=0.249 Sum_probs=29.2
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
.|.|||.|.+|+++|..|++ |++|.+.|....
T Consensus 7 ~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 7 NVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp CEEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred EEEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 48999999999999999999 999999998754
No 377
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=68.74 E-value=2.5 Score=42.50 Aligned_cols=32 Identities=34% Similarity=0.458 Sum_probs=28.8
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEecc
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
.-.|+|||+|..|..+|..|.. |.+|+++++.
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~ 200 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDIN 200 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 3569999999999999999988 9999999876
No 378
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=68.53 E-value=2.8 Score=43.12 Aligned_cols=34 Identities=21% Similarity=0.313 Sum_probs=30.8
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
...+.|||.|.-|+.+|..|++ |++|+++++...
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4678999999999999999999 999999998754
No 379
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=68.24 E-value=2.8 Score=42.27 Aligned_cols=33 Identities=24% Similarity=0.268 Sum_probs=29.2
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.-.|+|+|+|..|+.+|..|.. |.+|.+.++..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4569999999999999998888 99999999764
No 380
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=68.00 E-value=2.5 Score=43.22 Aligned_cols=32 Identities=19% Similarity=0.329 Sum_probs=29.2
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
...-|||.|.-|+.+|..|++ |++|+++++..
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 457899999999999999999 99999999874
No 381
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=67.95 E-value=3 Score=40.28 Aligned_cols=31 Identities=23% Similarity=0.340 Sum_probs=28.4
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.+.|||.|..|...|..|++ |++|.+.++..
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 48999999999999999999 99999998763
No 382
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=67.84 E-value=2.7 Score=40.35 Aligned_cols=31 Identities=29% Similarity=0.454 Sum_probs=28.4
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.+.|||.|..|...|..|++ |++|.+.++..
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 48899999999999999999 99999998764
No 383
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=67.67 E-value=3.2 Score=39.94 Aligned_cols=31 Identities=26% Similarity=0.337 Sum_probs=28.2
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEecc
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
-.+.|||.|..|...|..|++ |.+|.+.++.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 36 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLM 36 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 459999999999999999999 9999998875
No 384
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=67.66 E-value=2.9 Score=39.86 Aligned_cols=32 Identities=31% Similarity=0.407 Sum_probs=29.1
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
-|+|.|+|..|..++.+|.+ |.+|.++.|...
T Consensus 5 ~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 5 KILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 49999999999999999999 999999998753
No 385
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=67.34 E-value=2.9 Score=40.17 Aligned_cols=31 Identities=29% Similarity=0.380 Sum_probs=27.9
Q ss_pred ccEEEEC-CCcchhHHHHhhcC-CCeEEEEecc
Q 008163 48 YDYIIIG-GGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 48 ~DvIIVG-sG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
-.++|+| +|..|..+|..|++ |.+|.++.|.
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 4589999 99999999999999 9999999875
No 386
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=67.33 E-value=2.9 Score=43.31 Aligned_cols=34 Identities=24% Similarity=0.421 Sum_probs=30.6
Q ss_pred ccEEEECCCcchhHHHHhhcC--CCeEEEEeccCCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ--NASVLLLERGGSP 81 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~--G~~VlvLE~G~~~ 81 (575)
-.++|||+|..|+-+|..|++ |.+|.++|+++..
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~ 195 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQI 195 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcc
Confidence 479999999999999999987 8999999998754
No 387
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=67.28 E-value=3.3 Score=40.24 Aligned_cols=32 Identities=19% Similarity=0.220 Sum_probs=29.2
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
-.+.|||.|..|...|..|++ |++|.+.++..
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 459999999999999999999 99999998764
No 388
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=67.24 E-value=2.7 Score=41.11 Aligned_cols=31 Identities=23% Similarity=0.289 Sum_probs=27.9
Q ss_pred cEEEECCCcchhHHHHhhcC-CC--eEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NA--SVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~--~VlvLE~G~ 79 (575)
.+.|||+|..|..+|..|++ |+ .|.++++..
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 37899999999999999999 98 999998763
No 389
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=67.19 E-value=2.7 Score=40.67 Aligned_cols=32 Identities=19% Similarity=0.159 Sum_probs=29.0
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
-.+.|||.|..|...|..|++ |++|.+.++..
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 469999999999999999999 99999998763
No 390
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=67.02 E-value=3 Score=41.47 Aligned_cols=34 Identities=18% Similarity=0.396 Sum_probs=30.1
Q ss_pred cccEEEECCCcchhHHHHhhcC-C-CeEEEEeccCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-N-ASVLLLERGGS 80 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G-~~VlvLE~G~~ 80 (575)
...|+|||+|..|+.+|..|+. | .++.|+|....
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~V 153 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQI 153 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcC
Confidence 4679999999999999999999 8 58999997754
No 391
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=66.98 E-value=3.4 Score=41.88 Aligned_cols=31 Identities=23% Similarity=0.304 Sum_probs=27.9
Q ss_pred cEEEECCCcchhHHHHhhcCCCeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQNASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~G~~VlvLE~G~ 79 (575)
.+.|||.|..|+..|..|++|++|.++++..
T Consensus 2 kI~VIG~G~vG~~~A~~La~G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSLQNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTTTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhCCCEEEEEECCH
Confidence 3789999999999999999999999998763
No 392
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=66.61 E-value=3.6 Score=39.97 Aligned_cols=32 Identities=19% Similarity=0.274 Sum_probs=28.9
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
-.+.|||.|..|...|..|++ |.+|.++++..
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 469999999999999999999 99999998764
No 393
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=66.60 E-value=3.4 Score=37.38 Aligned_cols=30 Identities=27% Similarity=0.366 Sum_probs=27.3
Q ss_pred EEEECC-CcchhHHHHhhcC-CCeEEEEeccC
Q 008163 50 YIIIGG-GTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 50 vIIVGs-G~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
|+|.|+ |..|..++.+|.+ |.+|.++.|..
T Consensus 3 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 3 IGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred EEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 899995 9999999999999 99999998864
No 394
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=66.56 E-value=3.5 Score=40.23 Aligned_cols=31 Identities=26% Similarity=0.217 Sum_probs=29.1
Q ss_pred cEEEECCCcchhHHHHhhcC-C-CeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-N-ASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G-~~VlvLE~G~ 79 (575)
.+.|||.|..|..+|..|++ | ++|.+.++..
T Consensus 26 ~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 26 TIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred eEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 59999999999999999999 9 9999999875
No 395
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=66.56 E-value=2.9 Score=41.75 Aligned_cols=31 Identities=16% Similarity=0.245 Sum_probs=27.9
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEecc
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
--|+|+|.|..|..+|.+|.+ |.+|++.++.
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 459999999999999999999 9999998753
No 396
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=66.54 E-value=4 Score=36.99 Aligned_cols=31 Identities=26% Similarity=0.344 Sum_probs=28.1
Q ss_pred EEEEC-CCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 50 YIIIG-GGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 50 vIIVG-sG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
++|.| +|..|..++.+|.+ |.+|.++.|...
T Consensus 3 ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 35 (219)
T 3dqp_A 3 IFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVE 35 (219)
T ss_dssp EEEESTTSHHHHHHHHHHTTSSCEEEEEESSGG
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCcc
Confidence 78999 79999999999999 999999998753
No 397
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=66.48 E-value=3.1 Score=40.63 Aligned_cols=31 Identities=16% Similarity=0.298 Sum_probs=27.9
Q ss_pred ccEEEECCCcchhHHHHhhcC-CC-eEEEEecc
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERG 78 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~-~VlvLE~G 78 (575)
-.++|+|+|.+|..+|..|++ |. +|.|+.|.
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 469999999999999999999 97 89999876
No 398
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=66.44 E-value=3.2 Score=42.24 Aligned_cols=35 Identities=17% Similarity=0.367 Sum_probs=30.3
Q ss_pred cccEEEECCCcchhHHHHhhcC-CC---eEEEEeccCCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NA---SVLLLERGGSP 81 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~---~VlvLE~G~~~ 81 (575)
+--++|.|+|.+|..+|..|.+ |. +|.++|+.+..
T Consensus 219 d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~Gli 257 (487)
T 3nv9_A 219 ECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSKGSL 257 (487)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETTEEC
T ss_pred hcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEeccccc
Confidence 4569999999999999999988 86 79999988654
No 399
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=66.41 E-value=3.1 Score=44.04 Aligned_cols=34 Identities=18% Similarity=0.371 Sum_probs=30.7
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
-.|+|||+|..|+-+|..|++ +.+|.+++|.+.+
T Consensus 187 k~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 187 QRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHF 221 (542)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcc
Confidence 469999999999999999999 9999999998654
No 400
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=66.35 E-value=3.1 Score=40.15 Aligned_cols=32 Identities=22% Similarity=0.327 Sum_probs=28.9
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
-.+.|||.|..|..+|..|.. |.+|++.++..
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 459999999999999999988 99999998763
No 401
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=66.28 E-value=3 Score=41.54 Aligned_cols=36 Identities=14% Similarity=0.187 Sum_probs=30.0
Q ss_pred CCCcccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 44 PVSYYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 44 ~~~~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
|++.-.+.|||.|..|...|..|++ |++|.+.++..
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred hhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3344679999999999999999999 99999998763
No 402
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=66.21 E-value=3.7 Score=39.33 Aligned_cols=33 Identities=18% Similarity=0.293 Sum_probs=28.7
Q ss_pred cccEEEECCCcchhHHHHhhcC-CC-eEEEEeccC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGG 79 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~-~VlvLE~G~ 79 (575)
.-.++|+|+|.+|..+|..|++ |. +|.|+.|..
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 3469999999999999999999 96 899998763
No 403
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=66.09 E-value=2.7 Score=43.79 Aligned_cols=31 Identities=29% Similarity=0.472 Sum_probs=28.6
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.|.|||+|.-|..+|..|++ |++|.+.|+..
T Consensus 7 kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 7 TVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 58999999999999999999 99999998764
No 404
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=65.85 E-value=5.1 Score=40.64 Aligned_cols=45 Identities=16% Similarity=0.082 Sum_probs=32.3
Q ss_pred hcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCC
Q 008163 221 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGA 281 (575)
Q Consensus 221 ~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~ 281 (575)
.+++.+ +|+++++|++|..+++ . |.+...+|+. +. ++.||+|+|.
T Consensus 213 ~~~~~g-~i~~~~~V~~i~~~~~-----~---v~v~~~~g~~--~~-----ad~vi~a~~~ 257 (431)
T 3k7m_X 213 MSQEIP-EIRLQTVVTGIDQSGD-----V---VNVTVKDGHA--FQ-----AHSVIVATPM 257 (431)
T ss_dssp HHTTCS-CEESSCCEEEEECSSS-----S---EEEEETTSCC--EE-----EEEEEECSCG
T ss_pred HHhhCC-ceEeCCEEEEEEEcCC-----e---EEEEECCCCE--EE-----eCEEEEecCc
Confidence 455667 9999999999987765 3 3344446653 33 7999999984
No 405
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=65.77 E-value=3.6 Score=42.04 Aligned_cols=32 Identities=25% Similarity=0.284 Sum_probs=29.0
Q ss_pred ccEEEECCCcchhHHHHhhcCCCeEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQNASVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~G~~VlvLE~G~ 79 (575)
-.+.|||.|..|+.+|..|++|.+|+++++..
T Consensus 37 mkIaVIGlG~mG~~lA~~La~G~~V~~~D~~~ 68 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQNHEVVALDIVQ 68 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTSEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHcCCeEEEEecCH
Confidence 36999999999999999999999999999864
No 406
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=65.58 E-value=2.9 Score=39.41 Aligned_cols=31 Identities=16% Similarity=0.186 Sum_probs=27.2
Q ss_pred cEEEECC-C-cchhHHHHhhcC-CCeEEEEeccC
Q 008163 49 DYIIIGG-G-TAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGs-G-~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
-++|.|+ | ..|..+|.+|++ |.+|+++.|..
T Consensus 24 ~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~ 57 (266)
T 3o38_A 24 VVLVTAAAGTGIGSTTARRALLEGADVVISDYHE 57 (266)
T ss_dssp EEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH
Confidence 4899998 7 599999999999 99999998763
No 407
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=65.53 E-value=3.1 Score=39.88 Aligned_cols=33 Identities=15% Similarity=0.256 Sum_probs=28.3
Q ss_pred cccEEEECCCcchhHHHHhhcC-CC-eEEEEeccC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGG 79 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~-~VlvLE~G~ 79 (575)
.-.++|+|+|.+|..+|..|++ |. +|.|+.|..
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 3469999999999999999999 97 799997763
No 408
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=65.41 E-value=3.5 Score=37.45 Aligned_cols=30 Identities=27% Similarity=0.464 Sum_probs=27.4
Q ss_pred EEEECC-CcchhHHHHhhcC-CCeEEEEeccC
Q 008163 50 YIIIGG-GTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 50 vIIVGs-G~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
++|.|+ |..|..++.+|.+ |.+|.++.|..
T Consensus 3 ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 3 IAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 899997 9999999999999 99999998863
No 409
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=65.34 E-value=3.3 Score=40.08 Aligned_cols=32 Identities=25% Similarity=0.375 Sum_probs=28.9
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
-.+.|||.|..|..+|..|.. |.+|++.++..
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 459999999999999999988 99999998763
No 410
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=65.34 E-value=3.5 Score=36.72 Aligned_cols=31 Identities=29% Similarity=0.362 Sum_probs=28.1
Q ss_pred cEEEECC-CcchhHHHHhhcC-CCeEEEEeccC
Q 008163 49 DYIIIGG-GTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGs-G~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
-++|+|+ |..|..++.+|.+ |.+|.++.|..
T Consensus 5 ~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 5 KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred EEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 4899998 9999999999999 99999999864
No 411
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=65.25 E-value=3.4 Score=38.00 Aligned_cols=32 Identities=16% Similarity=0.303 Sum_probs=28.7
Q ss_pred ccEEEECC-CcchhHHHHhhcC-CCeEEEEeccC
Q 008163 48 YDYIIIGG-GTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGs-G~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
--++|.|+ |..|..+|.+|.+ |++|.++.|..
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 35999997 9999999999999 99999999864
No 412
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=65.17 E-value=3.2 Score=40.36 Aligned_cols=31 Identities=23% Similarity=0.348 Sum_probs=27.9
Q ss_pred cEEEECCCcchhHHHHhhcC-C--CeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-N--ASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G--~~VlvLE~G~ 79 (575)
.+.|||+|..|..+|..|++ | ..|.++++..
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 48999999999999999999 8 6899999863
No 413
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=65.06 E-value=3.3 Score=39.00 Aligned_cols=29 Identities=24% Similarity=0.528 Sum_probs=27.1
Q ss_pred EEEECCCcchhHHHHhhcC-C-CeEEEEecc
Q 008163 50 YIIIGGGTAGCPLAATLSQ-N-ASVLLLERG 78 (575)
Q Consensus 50 vIIVGsG~aG~~~A~~La~-G-~~VlvLE~G 78 (575)
+.|||+|..|...|..|++ | .+|.+.++.
T Consensus 3 i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~ 33 (263)
T 1yqg_A 3 VYFLGGGNMAAAVAGGLVKQGGYRIYIANRG 33 (263)
T ss_dssp EEEECCSHHHHHHHHHHHHHCSCEEEEECSS
T ss_pred EEEECchHHHHHHHHHHHHCCCCeEEEECCC
Confidence 7899999999999999999 9 999999876
No 414
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=64.82 E-value=3.3 Score=39.43 Aligned_cols=29 Identities=24% Similarity=0.358 Sum_probs=26.9
Q ss_pred EEEECCCcchhHHHHhhcC-CCeEEEEecc
Q 008163 50 YIIIGGGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 50 vIIVGsG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
+.|||+|..|...|..|++ |++|.++++.
T Consensus 3 i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 32 (279)
T 2f1k_A 3 IGVVGLGLIGASLAGDLRRRGHYLIGVSRQ 32 (279)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEcCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 7899999999999999999 9999999875
No 415
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=64.82 E-value=3.1 Score=39.74 Aligned_cols=32 Identities=22% Similarity=0.253 Sum_probs=28.6
Q ss_pred ccEEEECCCcchhHHHHhhcC-CC-eEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~-~VlvLE~G~ 79 (575)
-.++|+|+|.+|..+|..|++ |. +|.|..|..
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 469999999999999999999 97 899998764
No 416
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=64.50 E-value=3.4 Score=39.44 Aligned_cols=32 Identities=25% Similarity=0.405 Sum_probs=28.7
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
-.+.|||+|..|..+|..|.+ |.+|.+.+|..
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 359999999999999999999 99999998763
No 417
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=64.44 E-value=3.8 Score=39.34 Aligned_cols=31 Identities=26% Similarity=0.389 Sum_probs=28.2
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.+.|||.|..|...|..|++ |.+|.++++..
T Consensus 7 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred eEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 59999999999999999999 99999998753
No 418
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=64.19 E-value=4.4 Score=38.79 Aligned_cols=33 Identities=21% Similarity=0.227 Sum_probs=28.5
Q ss_pred cccEEEECCCcchhHHHHhhcC-CC-eEEEEeccC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGG 79 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~-~VlvLE~G~ 79 (575)
.-.++|+|+|.+|..+|..|++ |. +|.|..|..
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred CCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 3469999999999999999999 95 999998753
No 419
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=64.17 E-value=2.4 Score=39.30 Aligned_cols=29 Identities=21% Similarity=0.253 Sum_probs=27.1
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEec
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLER 77 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~ 77 (575)
.+.|||.|..|.+.|..|.+ |++|.++++
T Consensus 8 kI~IIG~G~~G~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 8 RVGIFDDGSSTVNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp EEEEECCSCCCSCHHHHHHHTTCEEEECSS
T ss_pred EEEEEeeCHHHHHHHHHHHHCCCEEEEecC
Confidence 59999999999999999999 999999876
No 420
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=64.00 E-value=2.9 Score=41.94 Aligned_cols=32 Identities=16% Similarity=0.244 Sum_probs=29.1
Q ss_pred cEEEECCCcchhHHHHhhcC-C-------CeEEEEeccCC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-N-------ASVLLLERGGS 80 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G-------~~VlvLE~G~~ 80 (575)
.+.|||+|..|...|..|++ | .+|.++++...
T Consensus 23 kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred EEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 49999999999999999999 9 99999988754
No 421
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=63.85 E-value=3.6 Score=43.76 Aligned_cols=34 Identities=38% Similarity=0.617 Sum_probs=31.1
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGSP 81 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~~ 81 (575)
-.+||||.|-.|..+|..|.+ |.+|+++|+.+..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~ 383 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESP 383 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHH
Confidence 569999999999999999999 9999999988653
No 422
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=63.54 E-value=3.8 Score=41.46 Aligned_cols=28 Identities=21% Similarity=0.387 Sum_probs=25.8
Q ss_pred cEEEECCCcchhHHHHhhcC--CCeEEEEe
Q 008163 49 DYIIIGGGTAGCPLAATLSQ--NASVLLLE 76 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~--G~~VlvLE 76 (575)
.+.|||+|..|...|..|++ |.+|.+++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 48999999999999999976 89999998
No 423
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=63.49 E-value=4.1 Score=39.05 Aligned_cols=31 Identities=23% Similarity=0.313 Sum_probs=27.8
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.+.|||.|..|...|..|++ |.+|.+.++..
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 37899999999999999999 99999998753
No 424
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=63.29 E-value=3.6 Score=40.25 Aligned_cols=33 Identities=15% Similarity=0.171 Sum_probs=29.0
Q ss_pred cccEEEECCCcchhHHHHhhcC-C----CeEEEEeccC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-N----ASVLLLERGG 79 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G----~~VlvLE~G~ 79 (575)
.-.+.|||.|..|...|..|++ | .+|.+.++..
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 3469999999999999999998 8 7899998764
No 425
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=63.28 E-value=2.7 Score=41.62 Aligned_cols=32 Identities=19% Similarity=0.274 Sum_probs=29.2
Q ss_pred cEEEECCCcchhHHHHhhcC-C-------CeEEEEeccCC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-N-------ASVLLLERGGS 80 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G-------~~VlvLE~G~~ 80 (575)
.+.|||+|..|...|..|++ | .+|.++++...
T Consensus 10 kI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 10 KVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred eEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 59999999999999999999 9 89999988753
No 426
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=63.06 E-value=4.1 Score=39.58 Aligned_cols=31 Identities=26% Similarity=0.439 Sum_probs=27.6
Q ss_pred cEEEECCCcchhHHHHhhcC---CCeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ---NASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~---G~~VlvLE~G~ 79 (575)
.+.|||+|..|..+|..|++ |..|.++|+..
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 37899999999999999987 58999999864
No 427
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=62.99 E-value=4.6 Score=42.80 Aligned_cols=50 Identities=20% Similarity=0.189 Sum_probs=36.6
Q ss_pred hhhhcCCC-CeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCC
Q 008163 218 LLEYANPS-GLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGA 281 (575)
Q Consensus 218 ~l~~~~~~-g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~ 281 (575)
+...+++. |++++.+ +|++|..++++ .+++|... +|+ ++. ++.||+|+|.
T Consensus 200 L~~~~~~~~Gv~i~~~-~V~~i~~~~~g----~~~~v~~~--~G~--~i~-----ad~vI~A~G~ 250 (550)
T 2e4g_A 200 LRRFATEKLGVRHVED-RVEHVQRDANG----NIESVRTA--TGR--VFD-----ADLFVDCSGF 250 (550)
T ss_dssp HHHHHHHHSCCEEEEC-CEEEEEECTTS----CEEEEEET--TSC--EEE-----CSEEEECCGG
T ss_pred HHHHHHhcCCcEEEEC-eEeEEEEcCCC----CEEEEEEC--CCC--EEE-----CCEEEECCCC
Confidence 34455555 9999999 99999886553 66777664 564 343 7999999996
No 428
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=62.98 E-value=5.6 Score=37.64 Aligned_cols=30 Identities=13% Similarity=0.118 Sum_probs=26.8
Q ss_pred EEEECC---CcchhHHHHhhcC-CCeEEEEeccC
Q 008163 50 YIIIGG---GTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 50 vIIVGs---G~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
++|.|+ |..|..+|.+|++ |.+|+++.|..
T Consensus 9 vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~ 42 (275)
T 2pd4_A 9 GLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE 42 (275)
T ss_dssp EEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST
T ss_pred EEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCH
Confidence 889997 6899999999999 99999998764
No 429
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=62.77 E-value=3.8 Score=38.60 Aligned_cols=31 Identities=19% Similarity=0.347 Sum_probs=28.2
Q ss_pred cEEEECCCcchhHHHHhhcC-CC-eEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~-~VlvLE~G~ 79 (575)
.++|||+|.+|..+|..|.+ |. +|.|..|..
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 79999999999999999999 87 899998863
No 430
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=62.32 E-value=3.8 Score=39.88 Aligned_cols=31 Identities=26% Similarity=0.311 Sum_probs=28.7
Q ss_pred ccEEEECCCcchhHHHHhhcC-CC-eEEEEecc
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERG 78 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~-~VlvLE~G 78 (575)
-.+.|||.|..|...|..|++ |+ +|.+.++.
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 469999999999999999999 99 99999885
No 431
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=62.21 E-value=4.5 Score=42.04 Aligned_cols=33 Identities=18% Similarity=0.246 Sum_probs=29.8
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
+-++.|||.|.-|..+|..|++ |.+|.+.+|..
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 4579999999999999999999 99999998763
No 432
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=62.11 E-value=4 Score=44.84 Aligned_cols=31 Identities=39% Similarity=0.515 Sum_probs=28.8
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.|.|||+|.-|..+|..|++ |++|++.|+..
T Consensus 314 kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 314 KVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred EEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 49999999999999999999 99999999864
No 433
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=61.94 E-value=4 Score=38.86 Aligned_cols=29 Identities=21% Similarity=0.337 Sum_probs=26.7
Q ss_pred EEEECCCcchhHHHHhhcC-CC--eEEEEecc
Q 008163 50 YIIIGGGTAGCPLAATLSQ-NA--SVLLLERG 78 (575)
Q Consensus 50 vIIVGsG~aG~~~A~~La~-G~--~VlvLE~G 78 (575)
+.|||.|..|...|..|++ |. +|.+.++.
T Consensus 4 I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 35 (281)
T 2g5c_A 4 VLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 35 (281)
T ss_dssp EEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred EEEEecCHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 8899999999999999999 87 89998875
No 434
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=61.91 E-value=8.2 Score=39.79 Aligned_cols=41 Identities=15% Similarity=0.149 Sum_probs=30.5
Q ss_pred CeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCC
Q 008163 226 GLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGA 281 (575)
Q Consensus 226 g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~ 281 (575)
+.+|+++++|++|..+++ +++ +...+|+. +. ++.||+|++.
T Consensus 228 ~~~i~~~~~V~~i~~~~~-----~v~---v~~~~g~~--~~-----ad~vI~a~~~ 268 (472)
T 1b37_A 228 DPRLQLNKVVREIKYSPG-----GVT---VKTEDNSV--YS-----ADYVMVSASL 268 (472)
T ss_dssp CTTEESSCCEEEEEECSS-----CEE---EEETTSCE--EE-----ESEEEECSCH
T ss_pred ccEEEcCCEEEEEEEcCC-----cEE---EEECCCCE--EE-----cCEEEEecCH
Confidence 678999999999998776 433 44446653 33 6999999983
No 435
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=61.88 E-value=4 Score=39.80 Aligned_cols=32 Identities=19% Similarity=0.294 Sum_probs=28.7
Q ss_pred ccEEEECCCcchhHHHHhhcC-CC--eEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NA--SVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~--~VlvLE~G~ 79 (575)
-.+.|||.|..|...|..|.+ |. +|.+.++..
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 459999999999999999999 98 999998764
No 436
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=61.75 E-value=4.1 Score=38.79 Aligned_cols=32 Identities=16% Similarity=0.237 Sum_probs=27.9
Q ss_pred cccEEEECCCcchhHHHHhhcC-CC-eEEEEecc
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERG 78 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~-~VlvLE~G 78 (575)
.-.++|+|+|.+|..+|..|++ |. +|.|+.|.
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQAGPSELVIANRD 153 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 3469999999999999999999 94 89999775
No 437
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=61.72 E-value=4.2 Score=39.55 Aligned_cols=31 Identities=19% Similarity=0.396 Sum_probs=27.8
Q ss_pred ccEEEECCCcchhHHHHhhcC-CC-eEEEEecc
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERG 78 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~-~VlvLE~G 78 (575)
-.++|+|+|.+|..+|..|++ |. +|.|+.|.
T Consensus 149 k~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 469999999999999999999 96 89999876
No 438
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=61.56 E-value=4.8 Score=37.26 Aligned_cols=30 Identities=27% Similarity=0.472 Sum_probs=26.7
Q ss_pred EEEECC-CcchhHHHHhhcC-CCeEEEEeccC
Q 008163 50 YIIIGG-GTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 50 vIIVGs-G~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
++|.|+ |..|..+|.+|++ |.+|+++.|..
T Consensus 4 vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~ 35 (255)
T 2dkn_A 4 IAITGSASGIGAALKELLARAGHTVIGIDRGQ 35 (255)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred EEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCh
Confidence 788886 8899999999999 99999998864
No 439
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=61.53 E-value=5.6 Score=40.95 Aligned_cols=30 Identities=20% Similarity=0.334 Sum_probs=27.6
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEecc
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
.++|+|+|..|..+|..|++ |.+|.+++|.
T Consensus 5 ~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~ 35 (450)
T 1ff9_A 5 SVLMLGSGFVTRPTLDVLTDSGIKVTVACRT 35 (450)
T ss_dssp EEEEECCSTTHHHHHHHHHTTTCEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHhCcCEEEEEECC
Confidence 48999999999999999999 9999999875
No 440
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=61.47 E-value=4.1 Score=38.97 Aligned_cols=30 Identities=17% Similarity=0.370 Sum_probs=27.8
Q ss_pred cEEEECC-CcchhHHHHhhcC-CCeEEEEecc
Q 008163 49 DYIIIGG-GTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 49 DvIIVGs-G~aG~~~A~~La~-G~~VlvLE~G 78 (575)
.+.|||+ |..|..+|..|++ |++|.+.++.
T Consensus 13 ~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~ 44 (286)
T 3c24_A 13 TVAILGAGGKMGARITRKIHDSAHHLAAIEIA 44 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSSSEEEEECCS
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 5999999 9999999999999 9999999875
No 441
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=61.36 E-value=5.4 Score=41.15 Aligned_cols=45 Identities=11% Similarity=0.119 Sum_probs=33.7
Q ss_pred eEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCCcCcHHH
Q 008163 227 LTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQL 287 (575)
Q Consensus 227 ~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~~~sp~l 287 (575)
.+|+++++|++|..+++ ++.+...+| ++. ++.||+|++.....+|
T Consensus 249 ~~i~~~~~V~~i~~~~~--------~~~v~~~~g---~~~-----ad~vV~a~p~~~~~~l 293 (475)
T 3lov_A 249 SEIRLETPLLAISREDG--------RYRLKTDHG---PEY-----ADYVLLTIPHPQVVQL 293 (475)
T ss_dssp CEEESSCCCCEEEEETT--------EEEEECTTC---CEE-----ESEEEECSCHHHHHHH
T ss_pred CEEEcCCeeeEEEEeCC--------EEEEEECCC---eEE-----CCEEEECCCHHHHHHH
Confidence 79999999999998776 355555466 233 7999999997555554
No 442
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=61.36 E-value=5 Score=36.92 Aligned_cols=32 Identities=22% Similarity=0.418 Sum_probs=28.2
Q ss_pred cEEEEC-CCcchhHHHHhhcC-C-CeEEEEeccCC
Q 008163 49 DYIIIG-GGTAGCPLAATLSQ-N-ASVLLLERGGS 80 (575)
Q Consensus 49 DvIIVG-sG~aG~~~A~~La~-G-~~VlvLE~G~~ 80 (575)
-++|.| +|..|..+|.+|++ | .+|.++.|...
T Consensus 25 ~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~ 59 (236)
T 3qvo_A 25 NVLILGAGGQIARHVINQLADKQTIKQTLFARQPA 59 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGG
T ss_pred EEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChh
Confidence 489999 69999999999999 9 89999988753
No 443
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=61.20 E-value=4.1 Score=40.38 Aligned_cols=32 Identities=22% Similarity=0.347 Sum_probs=28.3
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEecc
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
.--|+|+|.|..|..+|.+|.+ |.+|++.|..
T Consensus 175 GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~ 207 (355)
T 1c1d_A 175 GLTVLVQGLGAVGGSLASLAAEAGAQLLVADTD 207 (355)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3569999999999999999999 9999998753
No 444
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=61.19 E-value=4.7 Score=40.03 Aligned_cols=31 Identities=19% Similarity=0.350 Sum_probs=27.8
Q ss_pred EEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 50 YIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 50 vIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
++|+|||.-|..+|+.+.+ |++|++++..+.
T Consensus 4 I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 4 ICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 8999999999999998888 999999987654
No 445
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=61.10 E-value=2.3 Score=39.10 Aligned_cols=32 Identities=31% Similarity=0.584 Sum_probs=27.9
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEE-EeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLL-LERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~Vlv-LE~G~ 79 (575)
..+.|||+|..|...|..|++ |.+|.+ .++..
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 359999999999999999999 999988 76653
No 446
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=61.09 E-value=4.2 Score=39.56 Aligned_cols=31 Identities=29% Similarity=0.382 Sum_probs=27.6
Q ss_pred cEEEECCCcchhHHHHhhcC-CC-eEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~-~VlvLE~G~ 79 (575)
.|.|||+|..|..+|..|+. |. +|.++|...
T Consensus 4 kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 4 KISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 48999999999999999998 86 899998753
No 447
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=60.99 E-value=4.6 Score=36.65 Aligned_cols=30 Identities=30% Similarity=0.367 Sum_probs=27.0
Q ss_pred EEEEC-CCcchhHHHHhhc-C-CCeEEEEeccC
Q 008163 50 YIIIG-GGTAGCPLAATLS-Q-NASVLLLERGG 79 (575)
Q Consensus 50 vIIVG-sG~aG~~~A~~La-~-G~~VlvLE~G~ 79 (575)
++|.| +|..|..+|.+|+ + |++|.++.|..
T Consensus 8 vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 8 ITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp EEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 89999 5999999999999 6 99999998863
No 448
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=60.84 E-value=5 Score=39.30 Aligned_cols=31 Identities=19% Similarity=0.382 Sum_probs=27.6
Q ss_pred ccEEEECCCcchhHHHHhhcC-CC--eEEEEecc
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NA--SVLLLERG 78 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~--~VlvLE~G 78 (575)
-.+.|||+|..|.++|..|+. |. .|.++|..
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 459999999999999999999 76 89999874
No 449
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=60.56 E-value=5.3 Score=41.37 Aligned_cols=32 Identities=25% Similarity=0.361 Sum_probs=29.1
Q ss_pred cEEEECCCcchhHHHHhhcC--CC-eEEEEeccCC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ--NA-SVLLLERGGS 80 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~--G~-~VlvLE~G~~ 80 (575)
.+.|||.|.-|+.+|..|++ |+ +|+++++...
T Consensus 20 kIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 20 KIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp EEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred EEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 59999999999999999987 79 9999998864
No 450
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=60.02 E-value=6.3 Score=38.34 Aligned_cols=32 Identities=31% Similarity=0.398 Sum_probs=28.0
Q ss_pred cccEEEECCC-cchhHHHHhhcC-CCeEEEEecc
Q 008163 47 YYDYIIIGGG-TAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 47 ~~DvIIVGsG-~aG~~~A~~La~-G~~VlvLE~G 78 (575)
.-.++|||+| ..|..+|..|.. |.+|.+++|.
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 4679999999 569999999999 9999998765
No 451
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=59.95 E-value=5.7 Score=38.89 Aligned_cols=32 Identities=25% Similarity=0.045 Sum_probs=27.6
Q ss_pred cEEEECCCcchhH-HHHhhcC-CCeEEEEeccCC
Q 008163 49 DYIIIGGGTAGCP-LAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 49 DvIIVGsG~aG~~-~A~~La~-G~~VlvLE~G~~ 80 (575)
.+.|||.|.+|++ +|..|.+ |++|.+.|+...
T Consensus 6 ~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 6 HIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp EEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred EEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 4899999999996 7777777 999999998753
No 452
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=59.86 E-value=5.6 Score=41.09 Aligned_cols=32 Identities=44% Similarity=0.619 Sum_probs=29.0
Q ss_pred ccEEEECCCcchhHHHHhhcCCCeEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQNASVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~G~~VlvLE~G~ 79 (575)
-.++|+|+|-.|..+|..|.++.+|-++|+..
T Consensus 236 ~~v~I~GgG~ig~~lA~~L~~~~~v~iIE~d~ 267 (461)
T 4g65_A 236 RRIMIVGGGNIGASLAKRLEQTYSVKLIERNL 267 (461)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTSEEEEEESCH
T ss_pred cEEEEEcchHHHHHHHHHhhhcCceEEEecCH
Confidence 36999999999999999996688999999874
No 453
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=59.71 E-value=6.1 Score=39.08 Aligned_cols=35 Identities=14% Similarity=0.224 Sum_probs=30.7
Q ss_pred cccEEEECCCcchhHHHHhhcC-CC-eEEEEeccCCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERGGSP 81 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~-~VlvLE~G~~~ 81 (575)
...|+|||.|..|+.+|..|+. |. ++.|+|-....
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V~ 72 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVT 72 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCcc
Confidence 5789999999999999999999 84 89999977543
No 454
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=59.61 E-value=4.6 Score=41.02 Aligned_cols=33 Identities=21% Similarity=0.198 Sum_probs=29.3
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.--++|||.|..|..+|..|.. |.+|++.|+.+
T Consensus 220 GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 220 GKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 3569999999999999999988 99999999753
No 455
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=59.52 E-value=4.5 Score=41.76 Aligned_cols=31 Identities=26% Similarity=0.318 Sum_probs=28.3
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEecc
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
--|+|||+|-.|...|..|.+ |.+|.|++..
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 359999999999999999999 9999999864
No 456
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=59.38 E-value=5.3 Score=40.85 Aligned_cols=34 Identities=21% Similarity=0.455 Sum_probs=30.1
Q ss_pred cccEEEECCCcchhHHHHhhcC-C-CeEEEEeccCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-N-ASVLLLERGGS 80 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G-~~VlvLE~G~~ 80 (575)
...|+|||+|..|+.+|..|+. | .++.|+|....
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~V 75 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTI 75 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCBC
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCEe
Confidence 5789999999999999999999 8 48999997654
No 457
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=59.26 E-value=6.5 Score=40.84 Aligned_cols=31 Identities=19% Similarity=0.427 Sum_probs=27.7
Q ss_pred cEEEECCCcchhHHHHhhcC-C--CeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-N--ASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G--~~VlvLE~G~ 79 (575)
.+.|||.|..|+..|..|++ | ++|+++++..
T Consensus 11 kI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 11 KVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp EEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 59999999999999999998 5 7999998753
No 458
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=59.15 E-value=5.8 Score=38.40 Aligned_cols=32 Identities=28% Similarity=0.450 Sum_probs=29.0
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
-.+.|||.|..|...|..|++ |++|.+.++..
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999 99999998764
No 459
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=58.42 E-value=5.3 Score=37.72 Aligned_cols=30 Identities=13% Similarity=0.218 Sum_probs=26.4
Q ss_pred EEEEC---CCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 50 YIIIG---GGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 50 vIIVG---sG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
++|.| +|..|..+|.+|++ |.+|+++.+..
T Consensus 10 vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~ 43 (269)
T 2h7i_A 10 ILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDR 43 (269)
T ss_dssp EEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSC
T ss_pred EEEECCCCCCchHHHHHHHHHHCCCEEEEEecCh
Confidence 88899 48889999999999 99999998763
No 460
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=58.40 E-value=5.6 Score=37.85 Aligned_cols=31 Identities=16% Similarity=0.275 Sum_probs=27.6
Q ss_pred ccEEEECCCcchhHHHHhhcC-CC-eEEEEecc
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERG 78 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~-~VlvLE~G 78 (575)
-.++|||+|.+|..+|..|++ |. +|.|+.|.
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 469999999999999999999 85 79999775
No 461
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=58.35 E-value=4.6 Score=41.99 Aligned_cols=30 Identities=27% Similarity=0.441 Sum_probs=27.9
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEecc
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
++.|||.|..|...|..|++ |++|.+.++.
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~ 33 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRT 33 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 58999999999999999999 9999999875
No 462
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Probab=58.27 E-value=6.9 Score=37.92 Aligned_cols=29 Identities=24% Similarity=0.192 Sum_probs=25.5
Q ss_pred EEEECC---CcchhHHHHhhcC-CCeEEEEecc
Q 008163 50 YIIIGG---GTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 50 vIIVGs---G~aG~~~A~~La~-G~~VlvLE~G 78 (575)
++|.|+ |..|..+|.+|++ |.+|+++.+.
T Consensus 12 ~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~ 44 (315)
T 2o2s_A 12 AFVAGVADSHGYGWAIAKHLASAGARVALGTWP 44 (315)
T ss_dssp EEEECCSSSSSHHHHHHHHHHTTTCEEEEEECH
T ss_pred EEEeCCCCCCChHHHHHHHHHHCCCEEEEEecc
Confidence 888896 7889999999999 9999999753
No 463
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=58.24 E-value=4.8 Score=41.84 Aligned_cols=32 Identities=25% Similarity=0.231 Sum_probs=28.7
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
--|+|||.|..|..+|..|.. |.+|++.|+.+
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 459999999999999999988 99999998763
No 464
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=57.97 E-value=4.8 Score=37.96 Aligned_cols=31 Identities=26% Similarity=0.427 Sum_probs=28.2
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.+.|||+|..|..+|..|.+ |.+|.+.+|..
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 79999999999999999998 88999998763
No 465
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=57.80 E-value=4.9 Score=39.45 Aligned_cols=32 Identities=16% Similarity=0.121 Sum_probs=28.8
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
-.+||+|.|-.|..+|..|.+ |. |+++|+.+.
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~ 148 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGSEV-FVLAEDENV 148 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGG
T ss_pred CCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChh
Confidence 469999999999999999999 99 999998753
No 466
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=57.60 E-value=6.2 Score=37.01 Aligned_cols=30 Identities=27% Similarity=0.379 Sum_probs=26.6
Q ss_pred EEEECC---CcchhHHHHhhcC-CCeEEEEeccC
Q 008163 50 YIIIGG---GTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 50 vIIVGs---G~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
++|.|+ |..|..+|.+|++ |.+|+++.|..
T Consensus 11 vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 44 (261)
T 2wyu_A 11 ALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAE 44 (261)
T ss_dssp EEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCG
T ss_pred EEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCH
Confidence 899997 5889999999999 99999998753
No 467
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=57.56 E-value=6.3 Score=40.59 Aligned_cols=50 Identities=16% Similarity=0.236 Sum_probs=34.7
Q ss_pred CCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEe--------------CCCceeEEeeecCCCcEEEEccCCcCcH
Q 008163 225 SGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD--------------ATGAKHRAYLKNGPKNEIIVSAGALGSP 285 (575)
Q Consensus 225 ~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~--------------~~g~~~~v~~~~~aa~~VVlAaG~~~sp 285 (575)
.|+++++++.+.+|.-+ + ++.+|++.+ .+|+..++. ++.||+|+|.-.++
T Consensus 265 ~gv~i~~~~~~~~i~~~-~-----~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~-----~d~vi~a~G~~p~~ 328 (456)
T 1lqt_A 265 RRMVFRFLTSPIEIKGK-R-----KVERIVLGRNELVSDGSGRVAAKDTGEREELP-----AQLVVRSVGYRGVP 328 (456)
T ss_dssp EEEEEECSEEEEEEECS-S-----SCCEEEEEEEEEEECSSSSEEEEEEEEEEEEE-----CSEEEECSCEECCC
T ss_pred ceEEEEeCCCCeEEecC-C-----cEeEEEEEEEEecCCCcccccccCCCceEEEE-----cCEEEEccccccCC
Confidence 58999999999998754 3 555666642 134434554 79999999975555
No 468
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=57.51 E-value=4.4 Score=38.10 Aligned_cols=28 Identities=25% Similarity=0.204 Sum_probs=25.5
Q ss_pred EEEECCCcchhHHHHhhcC-CCeEEEEec
Q 008163 50 YIIIGGGTAGCPLAATLSQ-NASVLLLER 77 (575)
Q Consensus 50 vIIVGsG~aG~~~A~~La~-G~~VlvLE~ 77 (575)
+.|||.|..|...|..|++ |++|.+.++
T Consensus 3 I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 3 VGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred EEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 7899999999999999999 999998655
No 469
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=57.40 E-value=5.7 Score=38.78 Aligned_cols=33 Identities=24% Similarity=0.325 Sum_probs=28.7
Q ss_pred cccEEEECCCcchhHHHHhhcC-CC--eEEEEeccC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NA--SVLLLERGG 79 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~--~VlvLE~G~ 79 (575)
...+.|||+|..|.++|..|+. +. .|.++|...
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4679999999999999999998 76 899999763
No 470
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=57.35 E-value=5.3 Score=38.49 Aligned_cols=30 Identities=20% Similarity=0.223 Sum_probs=27.2
Q ss_pred EEEECCCcchhHHHHhhcC-CC--eEEEEeccC
Q 008163 50 YIIIGGGTAGCPLAATLSQ-NA--SVLLLERGG 79 (575)
Q Consensus 50 vIIVGsG~aG~~~A~~La~-G~--~VlvLE~G~ 79 (575)
+.|||+|..|.++|..|+. |. .|.++|+..
T Consensus 3 I~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 3 LGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 7899999999999999999 86 899999764
No 471
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=62.02 E-value=2.2 Score=38.63 Aligned_cols=31 Identities=29% Similarity=0.298 Sum_probs=28.1
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.+.|||.|..|...|..|.+ |.+|.+.+|..
T Consensus 21 ~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 52 (201)
T 2yjz_A 21 VVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNP 52 (201)
Confidence 48899999999999999999 99999988764
No 472
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=57.23 E-value=6.6 Score=37.80 Aligned_cols=32 Identities=22% Similarity=0.407 Sum_probs=27.7
Q ss_pred ccEEEECCCcchhHHHHhhcCCCeEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQNASVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~G~~VlvLE~G~ 79 (575)
-.|-|||.|..|...|..|+.|++|.+.++..
T Consensus 13 ~~V~vIG~G~MG~~iA~~laaG~~V~v~d~~~ 44 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIASKHEVVLQDVSE 44 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTSEEEEECSCH
T ss_pred CeEEEEeeCHHHHHHHHHHHcCCEEEEEECCH
Confidence 45899999999999888877789999998764
No 473
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=57.21 E-value=4.9 Score=41.03 Aligned_cols=29 Identities=24% Similarity=0.442 Sum_probs=26.8
Q ss_pred ccEEEECCCcchhHHHHhhcC-CC---eEEEEe
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NA---SVLLLE 76 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~---~VlvLE 76 (575)
-.++|+|+|.+|..+|..|.+ |. +|.|++
T Consensus 187 ~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 187 ITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 469999999999999999999 97 799999
No 474
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=57.19 E-value=6.1 Score=37.01 Aligned_cols=31 Identities=19% Similarity=0.322 Sum_probs=27.9
Q ss_pred cEEEECCCcchhHHHHhhcC-C----CeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-N----ASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G----~~VlvLE~G~ 79 (575)
.+.|||.|..|...|..|++ | .+|.+.++..
T Consensus 6 ~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~ 41 (262)
T 2rcy_A 6 KLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSK 41 (262)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSC
T ss_pred EEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCc
Confidence 59999999999999999999 8 6899998764
No 475
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=57.05 E-value=6.3 Score=37.83 Aligned_cols=30 Identities=23% Similarity=0.225 Sum_probs=26.3
Q ss_pred cEEEECCC---cchhHHHHhhcC-CCeEEEEecc
Q 008163 49 DYIIIGGG---TAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 49 DvIIVGsG---~aG~~~A~~La~-G~~VlvLE~G 78 (575)
-++|.|++ ..|..+|.+|++ |.+|+++.+.
T Consensus 32 ~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~ 65 (296)
T 3k31_A 32 KGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLS 65 (296)
T ss_dssp EEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCC
Confidence 48888985 789999999999 9999999876
No 476
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=56.99 E-value=5.3 Score=41.54 Aligned_cols=31 Identities=23% Similarity=0.253 Sum_probs=28.5
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
++.|||.|..|...|..|++ |++|.+.++..
T Consensus 4 ~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 4 DIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 58999999999999999999 99999998763
No 477
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=56.97 E-value=7.2 Score=41.06 Aligned_cols=51 Identities=18% Similarity=0.270 Sum_probs=36.7
Q ss_pred hhhhcCCCCeEEEcCcEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEeeecCCCcEEEEccCCc
Q 008163 218 LLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGAL 282 (575)
Q Consensus 218 ~l~~~~~~g~~v~~~~~V~~l~~~~~~~~~~~v~GV~~~~~~g~~~~v~~~~~aa~~VVlAaG~~ 282 (575)
+...+++.|++++.+ +|++|..++++ .+++|... +|+ ++ .++.||.|+|..
T Consensus 171 L~~~a~~~gv~~~~~-~v~~i~~~~~g----~~~~v~~~--~g~--~i-----~ad~vV~A~G~~ 221 (538)
T 2aqj_A 171 LKRWAVERGVNRVVD-EVVDVRLNNRG----YISNLLTK--EGR--TL-----EADLFIDCSGMR 221 (538)
T ss_dssp HHHHHHHTTCEEEEC-CEEEEEECTTS----CEEEEEET--TSC--EE-----CCSEEEECCGGG
T ss_pred HHHHHHHCCCEEEEe-eEeEEEEcCCC----cEEEEEEC--CCc--EE-----EeCEEEECCCCc
Confidence 344555579999999 89999886553 56677653 564 34 379999999963
No 478
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=56.90 E-value=4.3 Score=42.74 Aligned_cols=30 Identities=33% Similarity=0.513 Sum_probs=26.6
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEecc
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
.++|+|+|.+|..+|..|++ |.+|.++.|.
T Consensus 366 ~vlV~GaGGig~aia~~L~~~G~~V~i~~R~ 396 (523)
T 2o7s_A 366 TVVVIGAGGAGKALAYGAKEKGAKVVIANRT 396 (523)
T ss_dssp CEEEECCSHHHHHHHHHHHHHCC-CEEEESS
T ss_pred EEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 59999999999999999999 9999999875
No 479
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=56.66 E-value=5.2 Score=37.67 Aligned_cols=30 Identities=27% Similarity=0.402 Sum_probs=27.4
Q ss_pred cEEEECCCcchhHHHHhhcC-CCe-EEEEecc
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NAS-VLLLERG 78 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~-VlvLE~G 78 (575)
.+.|||+|..|...|..|++ |.+ |.+.++.
T Consensus 12 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~ 43 (266)
T 3d1l_A 12 PIVLIGAGNLATNLAKALYRKGFRIVQVYSRT 43 (266)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred eEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCC
Confidence 59999999999999999999 988 8888875
No 480
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=56.63 E-value=6.2 Score=38.81 Aligned_cols=32 Identities=28% Similarity=0.296 Sum_probs=28.9
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
--+.|||.|..|..+|..|+. |.+|++.++..
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 183 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTR 183 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEECCCc
Confidence 459999999999999999999 99999998754
No 481
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=56.63 E-value=5.5 Score=40.33 Aligned_cols=32 Identities=25% Similarity=0.450 Sum_probs=28.4
Q ss_pred cccEEEECCCcchhHHHHhhcC-CC-eEEEEecc
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NA-SVLLLERG 78 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~-~VlvLE~G 78 (575)
.-.|.|||+|..|..+|..|.. |. +|++.++.
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~ 200 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRT 200 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSS
T ss_pred CCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 3459999999999999999988 97 89999876
No 482
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=56.40 E-value=6.2 Score=43.34 Aligned_cols=32 Identities=25% Similarity=0.338 Sum_probs=29.2
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
--|-|||+|..|.-+|..++. |+.|+|+|...
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 469999999999999999999 99999999764
No 483
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=56.39 E-value=5.6 Score=38.27 Aligned_cols=32 Identities=31% Similarity=0.410 Sum_probs=29.1
Q ss_pred cEEEECC-CcchhHHHHhhcC-CCeEEEEeccCC
Q 008163 49 DYIIIGG-GTAGCPLAATLSQ-NASVLLLERGGS 80 (575)
Q Consensus 49 DvIIVGs-G~aG~~~A~~La~-G~~VlvLE~G~~ 80 (575)
-|+|.|+ |..|..++.+|.+ |++|.++.|...
T Consensus 9 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 9 RILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred eEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 4899998 9999999999999 999999998754
No 484
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=56.37 E-value=5.9 Score=41.36 Aligned_cols=33 Identities=21% Similarity=0.208 Sum_probs=29.9
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
...+.|||.|..|..+|..|++ |++|.+.+|..
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999 99999998764
No 485
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=56.22 E-value=5.3 Score=39.43 Aligned_cols=31 Identities=32% Similarity=0.352 Sum_probs=28.2
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.+.|||.|..|...|..|.+ |.+|.+.++..
T Consensus 10 kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 10 PVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred EEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 48999999999999999999 99999998763
No 486
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=56.20 E-value=7.2 Score=36.48 Aligned_cols=30 Identities=20% Similarity=0.268 Sum_probs=27.6
Q ss_pred cEEEECCCcchhHHHHhhcC-CCeEEEEecc
Q 008163 49 DYIIIGGGTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 49 DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G 78 (575)
.+.|||.|..|...|..|.+ |..|.+.++.
T Consensus 5 ~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~ 35 (259)
T 2ahr_A 5 KIGIIGVGKMASAIIKGLKQTPHELIISGSS 35 (259)
T ss_dssp EEEEECCSHHHHHHHHHHTTSSCEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEECCC
Confidence 58999999999999999999 9999999875
No 487
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=56.11 E-value=6.6 Score=36.08 Aligned_cols=32 Identities=25% Similarity=0.382 Sum_probs=28.1
Q ss_pred cEEEEC-CCcchhHHHHhhcC-CC--eEEEEeccCC
Q 008163 49 DYIIIG-GGTAGCPLAATLSQ-NA--SVLLLERGGS 80 (575)
Q Consensus 49 DvIIVG-sG~aG~~~A~~La~-G~--~VlvLE~G~~ 80 (575)
-++|.| +|..|..+|.+|++ |. +|.++.|...
T Consensus 20 ~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~ 55 (242)
T 2bka_A 20 SVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKL 55 (242)
T ss_dssp EEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCC
T ss_pred eEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCC
Confidence 489999 59999999999999 99 9999988753
No 488
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=56.01 E-value=5.9 Score=38.80 Aligned_cols=31 Identities=16% Similarity=0.213 Sum_probs=27.8
Q ss_pred ccEEEECCCcchhHHHHhhcC-CC--eEEEEecc
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NA--SVLLLERG 78 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~--~VlvLE~G 78 (575)
-.+.|||+|..|..+|..|+. |. .|.++|..
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMKDLADEVALVDVM 55 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 469999999999999999998 86 89999874
No 489
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=55.87 E-value=6.2 Score=36.33 Aligned_cols=30 Identities=20% Similarity=0.284 Sum_probs=26.2
Q ss_pred cEEEECC-CcchhHHHHhhcC-CCeEEEEecc
Q 008163 49 DYIIIGG-GTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 49 DvIIVGs-G~aG~~~A~~La~-G~~VlvLE~G 78 (575)
-++|.|+ |..|..+|.+|++ |.+|+++.|.
T Consensus 9 ~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 9 RALVTGAGKGIGRDTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3788887 7889999999999 9999999875
No 490
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=55.82 E-value=6.8 Score=38.41 Aligned_cols=32 Identities=25% Similarity=0.238 Sum_probs=28.9
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
--+.|||.|..|..+|..|+. |.+|++.++..
T Consensus 156 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 188 (330)
T 2gcg_A 156 STVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQ 188 (330)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCCEEEEESSS
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 459999999999999999999 99999998753
No 491
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=55.79 E-value=7 Score=36.65 Aligned_cols=30 Identities=17% Similarity=0.379 Sum_probs=25.4
Q ss_pred cEEEECCC-c--chhHHHHhhcC-CCeEEEEecc
Q 008163 49 DYIIIGGG-T--AGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 49 DvIIVGsG-~--aG~~~A~~La~-G~~VlvLE~G 78 (575)
-++|.|++ . .|..+|.+|++ |.+|+++.+.
T Consensus 9 ~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~ 42 (266)
T 3oig_A 9 NIVVMGVANKRSIAWGIARSLHEAGARLIFTYAG 42 (266)
T ss_dssp EEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCc
Confidence 38888864 4 79999999999 9999999776
No 492
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=55.41 E-value=5.8 Score=42.50 Aligned_cols=35 Identities=20% Similarity=0.358 Sum_probs=30.7
Q ss_pred cccEEEECCCcchhHHHHhhcC-C-CeEEEEeccCCC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-N-ASVLLLERGGSP 81 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G-~~VlvLE~G~~~ 81 (575)
...|+|||+|..|+.+|..|+. | .++.|++.....
T Consensus 17 ~s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~Ve 53 (640)
T 1y8q_B 17 GGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTID 53 (640)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCBCC
T ss_pred cCeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCEEC
Confidence 4679999999999999999999 8 489999987654
No 493
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=55.36 E-value=7 Score=37.58 Aligned_cols=30 Identities=17% Similarity=0.174 Sum_probs=25.5
Q ss_pred EEEECC-CcchhHHHHhhcC-CCeEEEEeccC
Q 008163 50 YIIIGG-GTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 50 vIIVGs-G~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
++|.|+ |..|..++.+|.+ |++|.++.|..
T Consensus 5 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (315)
T 2ydy_A 5 VLVTGATGLLGRAVHKEFQQNNWHAVGCGFRR 36 (315)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCEEEEEC---
T ss_pred EEEECCCcHHHHHHHHHHHhCCCeEEEEccCC
Confidence 899997 9999999999999 99999998753
No 494
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=55.34 E-value=6.3 Score=37.01 Aligned_cols=30 Identities=10% Similarity=0.179 Sum_probs=26.4
Q ss_pred EEEECC---CcchhHHHHhhcC-CCeEEEEeccC
Q 008163 50 YIIIGG---GTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 50 vIIVGs---G~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
++|.|+ |..|..+|.+|++ |.+|+++.|..
T Consensus 12 vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 45 (265)
T 1qsg_A 12 ILVTGVASKLSIAYGIAQAMHREGAELAFTYQND 45 (265)
T ss_dssp EEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST
T ss_pred EEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH
Confidence 788886 5889999999999 99999998764
No 495
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=55.22 E-value=6 Score=40.34 Aligned_cols=33 Identities=24% Similarity=0.160 Sum_probs=29.1
Q ss_pred cccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
.--++|||.|..|..+|.+|.. |.+|++.|+.+
T Consensus 247 GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp 280 (464)
T 3n58_A 247 GKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDP 280 (464)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 3469999999999999999988 99999998753
No 496
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=55.03 E-value=6.8 Score=36.10 Aligned_cols=30 Identities=20% Similarity=0.288 Sum_probs=26.2
Q ss_pred cEEEECC-CcchhHHHHhhcC-CCeEEEEecc
Q 008163 49 DYIIIGG-GTAGCPLAATLSQ-NASVLLLERG 78 (575)
Q Consensus 49 DvIIVGs-G~aG~~~A~~La~-G~~VlvLE~G 78 (575)
-++|.|+ |..|..+|.+|++ |.+|+++.|.
T Consensus 9 ~vlITGasggiG~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 3d3w_A 9 RVLVTGAGKGIGRGTVQALHATGARVVAVSRT 40 (244)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3788886 7889999999999 9999999875
No 497
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=54.98 E-value=7.6 Score=36.38 Aligned_cols=30 Identities=27% Similarity=0.413 Sum_probs=25.2
Q ss_pred EEEECCC---cchhHHHHhhcC-CCeEEEEeccC
Q 008163 50 YIIIGGG---TAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 50 vIIVGsG---~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
+||-|++ -.|..+|.+|++ |.+|++..|..
T Consensus 9 alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~ 42 (256)
T 4fs3_A 9 YVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKE 42 (256)
T ss_dssp EEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSG
T ss_pred EEEECCCCCchHHHHHHHHHHHCCCEEEEEECCH
Confidence 6777853 578999999999 99999998763
No 498
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=54.83 E-value=6.2 Score=38.19 Aligned_cols=32 Identities=22% Similarity=0.446 Sum_probs=28.1
Q ss_pred ccEEEECCCcchhHHHHhhcC-CC--eEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NA--SVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~--~VlvLE~G~ 79 (575)
..|.|||+|..|..+|+.|+. |+ .|.|+|...
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 469999999999999999998 87 899999864
No 499
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=54.78 E-value=8.4 Score=37.82 Aligned_cols=32 Identities=22% Similarity=0.250 Sum_probs=28.9
Q ss_pred ccEEEECCCcchhHHHHhhcC-CCeEEEEeccC
Q 008163 48 YDYIIIGGGTAGCPLAATLSQ-NASVLLLERGG 79 (575)
Q Consensus 48 ~DvIIVGsG~aG~~~A~~La~-G~~VlvLE~G~ 79 (575)
--+.|||.|..|..+|..|.. |.+|++.++..
T Consensus 147 ~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~ 179 (333)
T 2d0i_A 147 KKVGILGMGAIGKAIARRLIPFGVKLYYWSRHR 179 (333)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEECCCc
Confidence 459999999999999999999 99999998764
No 500
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=54.78 E-value=7.1 Score=38.04 Aligned_cols=32 Identities=19% Similarity=0.425 Sum_probs=27.9
Q ss_pred cccEEEECCCcchhHHHHhhcC-CC--eEEEEecc
Q 008163 47 YYDYIIIGGGTAGCPLAATLSQ-NA--SVLLLERG 78 (575)
Q Consensus 47 ~~DvIIVGsG~aG~~~A~~La~-G~--~VlvLE~G 78 (575)
...+.|||+|..|.++|..|+. +. .|.++|..
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4579999999999999999998 74 79999864
Done!