BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008169
(575 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359495046|ref|XP_002265081.2| PREDICTED: integrator complex subunit 9 homolog [Vitis vinifera]
gi|296081277|emb|CBI17721.3| unnamed protein product [Vitis vinifera]
Length = 774
Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/588 (62%), Positives = 444/588 (75%), Gaps = 13/588 (2%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
MGMLGLPFL+R+ GF AKIY+TE ARIGQL+ME+L+ MN E+RQFYG EES PQWM W
Sbjct: 187 MGMLGLPFLSRVNGFRAKIYVTEVTARIGQLLMEDLVLMNKEFRQFYGCEESGLPQWMNW 246
Query: 61 EELELLPSALRKIALGEDGSELGGGCPCIA--HVKDCISKVQTLRFGEEACYNGILIIKA 118
E+LE LPS R+I LGEDG ELGG P + VK C+ KV TL++ +E CYNG LIIKA
Sbjct: 247 EKLESLPSLFREIVLGEDGVELGGWMPLYSADDVKGCMQKVHTLKYAQEVCYNGTLIIKA 306
Query: 119 FSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTE 178
SSGL+IG CNW I+G K NIA +S S F S HAM+FDY A++G+DLI+YSDLSS +
Sbjct: 307 VSSGLEIGTCNWTINGPKRNIACLSSSIFNSSHAMNFDYHALRGNDLIIYSDLSSPVLED 366
Query: 179 DIDQSSFS----------DDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGS 228
D S +S +N+ E L + ES+EEMEKL FICSC IDSVKAGGS
Sbjct: 367 VKDNSCYSAPTSQKSSTLSADNDQEASAELLLSTSESLEEMEKLNFICSCIIDSVKAGGS 426
Query: 229 VLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKL 288
VLIPI R+G+ LQLLE I++ +E SSLK+PI+IISSVAEELLA+TN IPEWLCKQRQEKL
Sbjct: 427 VLIPIGRLGIILQLLELISLSLEASSLKVPIFIISSVAEELLAFTNIIPEWLCKQRQEKL 486
Query: 289 FSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSG 348
FSG+P FAH +LIKEKK+HVFPAVHSP LL WQEPCI FSPHWSLRLGP +HLLRRWSG
Sbjct: 487 FSGEPFFAHTQLIKEKKLHVFPAVHSPNLLKIWQEPCIAFSPHWSLRLGPVVHLLRRWSG 546
Query: 349 DHNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 408
D NSLL++E VDA+LA+LPFKP++MKVLQCSFLSG KLQKVQPLLKILQPK VLFPE+
Sbjct: 547 DENSLLIMEEGVDADLALLPFKPMAMKVLQCSFLSGIKLQKVQPLLKILQPKFVLFPEDL 606
Query: 409 RTHVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLK 468
R VS+SD S + +Y ENET+ +PSLK S+ELEIAAD+ S R L + + I RLK
Sbjct: 607 RQLVSYSDTNSHAFFYYCENETLPVPSLKNSSELEIAADLVSLIHCRRLTAESIGIGRLK 666
Query: 469 GRLFVNHGKHQLLPENEPGGSSQTR-PFLHWGSPDPENLLAELSKMGINGSVERCMTDAE 527
G V HGKHQL +E SSQ+R P LHWGS D E LLA L KMGI GSVE+ +D +
Sbjct: 667 GDFSVTHGKHQLHSGSEQADSSQSRPPLLHWGSLDLERLLAVLEKMGIRGSVEQGNSDTD 726
Query: 528 SEDGFTVKVQDPEKSMIEVRAAVTVISAADKNLASRIVKAMENILEGI 575
SE+ V V +P K++IEVR T+ISA++++L+S I +A++ IL G+
Sbjct: 727 SENARVVHVYEPNKALIEVRENSTIISASNESLSSLIFEAVDGILSGL 774
>gi|255558732|ref|XP_002520390.1| conserved hypothetical protein [Ricinus communis]
gi|223540437|gb|EEF42006.1| conserved hypothetical protein [Ricinus communis]
Length = 705
Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/591 (59%), Positives = 464/591 (78%), Gaps = 17/591 (2%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
MGMLGLPFLT+ +GFSAKIY TEA AR+GQL+ME+L+ M++E+RQFYG+EES PQWM+W
Sbjct: 116 MGMLGLPFLTQCKGFSAKIYATEATARVGQLIMEDLVSMHVEFRQFYGSEESD-PQWMRW 174
Query: 61 EELELLPSALRKIALGEDGSELGGGCPCIA--HVKDCISKVQTLRFGEEACYNGILIIKA 118
EELELLPS LR++ LG+DGSELG P + VKDC+ K++ L++ E ACYNG L+IKA
Sbjct: 175 EELELLPSELREVTLGKDGSELGAWFPLYSSVDVKDCMQKIEMLKYAEAACYNGELVIKA 234
Query: 119 FSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTE 178
FSSG++IG+CNW+I G K N+A++S S F S HAM+FDY A++G+DLILYSD SS D E
Sbjct: 235 FSSGIEIGSCNWLIEGPKENMAWVSSSIFLSTHAMEFDYHALRGTDLILYSDFSSQDVIE 294
Query: 179 DIDQ------------SSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAG 226
D++Q SS S D +NW+EL + L + DES+EE +KLAF+CSC + SVKAG
Sbjct: 295 DVEQHESYFVSANHNLSSLSADGDNWKELNDCLLSNDESIEESDKLAFLCSCVVGSVKAG 354
Query: 227 GSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQE 286
GSVL+P+NR+G+ +QLLEQI+IF+E S++K+PIY+ISSVA ELLA+TN IPEWLCK RQE
Sbjct: 355 GSVLVPLNRLGIIMQLLEQISIFLESSAIKVPIYVISSVAAELLAFTNIIPEWLCKFRQE 414
Query: 287 KLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRW 346
KLFSG+PLF+HV+L+K+KK+HVFPAVHSP L+ NWQEPCIVF+ HW+LRLGP + LLRRW
Sbjct: 415 KLFSGEPLFSHVELMKDKKLHVFPAVHSPNLITNWQEPCIVFASHWNLRLGPVVPLLRRW 474
Query: 347 SGDHNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPE 406
D NSLLVLE+ +DA++A+LPFKPI+MKVLQCSFLSG + QK+QPLLKIL PK+VLFPE
Sbjct: 475 RRDENSLLVLEDGLDADMALLPFKPIAMKVLQCSFLSGIRTQKIQPLLKILHPKVVLFPE 534
Query: 407 EWRTHVSFSDVTS--FSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNI 464
+ + H++ S +S FSV +Y+ENET I SLK+S+++EIA D+A++F W+ LK+K +I
Sbjct: 535 DLKQHINASSSSSHPFSVLYYTENETQEIQSLKDSSDVEIATDLATRFCWKKLKRKDTDI 594
Query: 465 TRLKGRLFVNHGKHQLLPENEPGGSSQTRPFLHWGSPDPENLLAELSKMGINGSVERCMT 524
TRL+G L ++ KH+L+ + SSQ+R L G D E LL LSKMG NGS+ER M
Sbjct: 595 TRLEGELLIDDSKHRLVSGKKVSVSSQSRQLLLCGVVDMEKLLGTLSKMGFNGSIERNMN 654
Query: 525 DAESEDGFTVKVQDPEKSMIEVRAAVTVISAADKNLASRIVKAMENILEGI 575
D ES+ +K+ DP++++IEV TVI+A D+NLAS I +A+ +L+ I
Sbjct: 655 DGESDSVGIIKIHDPKEALIEVGGMSTVINAPDENLASVIFEAISTLLDVI 705
>gi|449520481|ref|XP_004167262.1| PREDICTED: integrator complex subunit 9 homolog, partial [Cucumis
sativus]
Length = 680
Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/584 (57%), Positives = 437/584 (74%), Gaps = 12/584 (2%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
MGMLGLPFLTR +GFSAKIY+TEA AR+G++MM++LI M+ME++QFYG+E+ + QWM+
Sbjct: 100 MGMLGLPFLTREKGFSAKIYVTEATARLGKIMMDDLIAMHMEFKQFYGSEDDAISQWMRQ 159
Query: 61 EELELLPSALRKIALGEDGSELGGGCPCI--AHVKDCISKVQTLRFGEEACYNGILIIKA 118
E+L LL LR++A G+D ++ GG P A VKDC+ KV+TLR+GEE CYNG L+IKA
Sbjct: 160 EDLSLLHHKLREVAFGQDRADFGGWMPMYSAADVKDCMQKVETLRYGEETCYNGTLVIKA 219
Query: 119 FSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTE 178
FSSGL+IG+CNW I+ K +IAYIS S F S +AMDFDY A+Q + I+YSD SSL
Sbjct: 220 FSSGLEIGSCNWTINCPKRDIAYISSSIFFSSNAMDFDYLALQ-KETIIYSDFSSLAFMN 278
Query: 179 DIDQS---SFSDDN----NNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLI 231
D++ S D+ + E L N LS E+VEE EKL FICSCAI SV++GGSVLI
Sbjct: 279 DVENDTRVSLIDNTLLPLSKEETLANLLSYPAETVEESEKLYFICSCAIQSVESGGSVLI 338
Query: 232 PINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSG 291
PINR+GV LQLLEQI+ ++ S LK+PIY ISSVAEELL + N IPEWLC+QRQ KLFSG
Sbjct: 339 PINRLGVNLQLLEQISASLDYSDLKVPIYFISSVAEELLTFANAIPEWLCRQRQHKLFSG 398
Query: 292 DPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHN 351
+P+F V+L+KE K+HV PA+HSPKLL+NWQEPCIVF PHWSLRLGP +HLLRRW GD +
Sbjct: 399 EPMFTFVELLKENKLHVVPAIHSPKLLINWQEPCIVFCPHWSLRLGPVVHLLRRWCGDPS 458
Query: 352 SLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTH 411
SLLVLE +D EL++LPFKP+SMKVLQCSF SG K +KV+PLLK+LQPK+V+ PE
Sbjct: 459 SLLVLEKGLDVELSLLPFKPMSMKVLQCSFQSGIKQEKVRPLLKVLQPKIVVLPENLSRL 518
Query: 412 VSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRL 471
++ ++ SF+V YSE +++H+P+LK+S+ELEIA+D A F WR L Q +NITRLKG L
Sbjct: 519 IN-TNTESFTVFTYSEGKSLHVPNLKDSSELEIASDSAMSFCWRKLHQGNINITRLKGEL 577
Query: 472 FVNHGKHQLLPENEPGGSSQTRPFLHWGSPDPENLLAELSKMGINGSVERCMTDAESEDG 531
+N GK +L EN Q RP +HWG P+ E LL LSKMGI GSV++ M+DAE D
Sbjct: 578 SLNCGKFKLFSENTQVAMYQ-RPLVHWGQPNLEKLLTVLSKMGIEGSVQQEMSDAEPNDV 636
Query: 532 FTVKVQDPEKSMIEVRAAVTVISAADKNLASRIVKAMENILEGI 575
+ + K +IE++ + T+IS DK L+++I A++++++G+
Sbjct: 637 HVIHIHGLTKGVIEIQESRTIISVVDKTLSAQIFNALDSVMDGV 680
>gi|449457454|ref|XP_004146463.1| PREDICTED: integrator complex subunit 9 homolog [Cucumis sativus]
Length = 693
Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/584 (57%), Positives = 437/584 (74%), Gaps = 12/584 (2%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
MGMLGLPFLTR +GFSAKIY+TEA AR+G++MM++LI M+ME++QFYG+E+ + QWM+
Sbjct: 113 MGMLGLPFLTREKGFSAKIYVTEATARLGKIMMDDLIAMHMEFKQFYGSEDDAISQWMRQ 172
Query: 61 EELELLPSALRKIALGEDGSELGGGCPCI--AHVKDCISKVQTLRFGEEACYNGILIIKA 118
E+L LL LR++A G+D ++ GG P A VKDC+ KV+TLR+GEE CYNG L+IKA
Sbjct: 173 EDLSLLHHKLREVAFGQDRADFGGWMPMYSAADVKDCMQKVETLRYGEETCYNGTLVIKA 232
Query: 119 FSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTE 178
FSSGL+IG+CNW I+ K +IAYIS S F S +AMDFDY A+Q + I+YSD SSL
Sbjct: 233 FSSGLEIGSCNWTINCPKRDIAYISSSIFFSSNAMDFDYLALQ-KETIIYSDFSSLAFMN 291
Query: 179 DIDQS---SFSDDN----NNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLI 231
D++ S D+ + E L N LS E+VEE EKL FICSCAI SV++GGSVLI
Sbjct: 292 DVENDTRVSLIDNTLLPLSKEETLANLLSYPAETVEESEKLYFICSCAIQSVESGGSVLI 351
Query: 232 PINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSG 291
PINR+GV LQLLEQI+ ++ S LK+PIY ISSVAEELL + N IPEWLC+QRQ KLFSG
Sbjct: 352 PINRLGVNLQLLEQISASLDYSDLKVPIYFISSVAEELLTFANAIPEWLCRQRQHKLFSG 411
Query: 292 DPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHN 351
+P+F V+L+KE K+HV PA+HSPKLL+NWQEPCIVF PHWSLRLGP +HLLRRW GD +
Sbjct: 412 EPMFTFVELLKENKLHVVPAIHSPKLLINWQEPCIVFCPHWSLRLGPVVHLLRRWCGDPS 471
Query: 352 SLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTH 411
SLLVLE +D EL++LPFKP+SMKVLQCSF SG K +KV+PLLK+LQPK+V+ PE
Sbjct: 472 SLLVLEKGLDVELSLLPFKPMSMKVLQCSFQSGIKQEKVRPLLKVLQPKIVVLPENLSRL 531
Query: 412 VSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRL 471
++ ++ SF+V YSE +++H+P+LK+S+ELEIA+D A F WR L Q +NITRLKG L
Sbjct: 532 IN-TNTESFTVFTYSEGKSLHVPNLKDSSELEIASDSAMSFCWRKLHQGNINITRLKGEL 590
Query: 472 FVNHGKHQLLPENEPGGSSQTRPFLHWGSPDPENLLAELSKMGINGSVERCMTDAESEDG 531
+N GK +L EN Q RP +HWG P+ E LL LSKMGI GSV++ M+DAE D
Sbjct: 591 SLNCGKFKLFSENTQVAMYQ-RPLVHWGQPNLEKLLTVLSKMGIEGSVQQEMSDAEPNDV 649
Query: 532 FTVKVQDPEKSMIEVRAAVTVISAADKNLASRIVKAMENILEGI 575
+ + K +IE++ + T+IS DK L+++I A++++++G+
Sbjct: 650 HVIHIHGLTKGVIEIQESRTIISVVDKTLSAQIFNALDSVMDGV 693
>gi|356541557|ref|XP_003539241.1| PREDICTED: LOW QUALITY PROTEIN: integrator complex subunit 9-like
[Glycine max]
Length = 794
Score = 633 bits (1633), Expect = e-179, Method: Compositional matrix adjust.
Identities = 321/593 (54%), Positives = 437/593 (73%), Gaps = 19/593 (3%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
MG++GLPFLTR +GFSAKIY+TEA+ARIGQLMME+L+ M+ E+RQFYG ES+ P W++
Sbjct: 203 MGIMGLPFLTRTKGFSAKIYVTEASARIGQLMMEDLVSMHAEFRQFYGPGESNFPSWLRH 262
Query: 61 EELELLPSALRKIALGEDGSELGGGCPCI--AHVKDCISKVQTLRFGEEACYNGILIIKA 118
EELE+LPS LR++ LG+DG ELGG P A VKD + K+ T+ + EE C+NG L+IKA
Sbjct: 263 EELEVLPSELRELILGKDGVELGGWMPLYSAADVKDFMLKIHTVNYAEEVCFNGTLVIKA 322
Query: 119 FSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTE 178
FSSG++IG+CNWI++ KG+IAY+SGS+F S HAM FDY ++QG+ +++YSD SL T+
Sbjct: 323 FSSGIEIGSCNWILNSPKGDIAYLSGSSFISAHAMPFDYHSLQGTCVLIYSDFLSLGDTQ 382
Query: 179 DI---DQSSFSDDNN----NWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLI 231
D D S S + + ++L N E EE EKL FICS A++ +K GGSVLI
Sbjct: 383 DGENGDNYSVSTADKLLPISSQDLAGFNHNSVEYSEEKEKLVFICSHAMEHIKQGGSVLI 442
Query: 232 PINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSG 291
P +R+G L LLE++ +E S K+P+YIISSVAEELLA N IPEWLCKQRQEKLF G
Sbjct: 443 PFDRLGTILLLLEEMTASLEASDTKVPVYIISSVAEELLALLNIIPEWLCKQRQEKLFDG 502
Query: 292 DPLFAHVKLIKEKKIHVFPAVHSPKLL-------MNWQEPCIVFSPHWSLRLGPTIHLLR 344
+PLFAH+KL+KE+KIHV PA+HS +LL +NWQEPCIVF PH +LR+GP +HLLR
Sbjct: 503 EPLFAHLKLLKERKIHVVPAIHSHELLNXCVACRINWQEPCIVFCPHRNLRMGPVVHLLR 562
Query: 345 RWSGDHNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLF 404
RW GD SLL+LE+ ++ L++LP++P++MKVLQC F G L +VQPLLK LQPK VL
Sbjct: 563 RWCGDPKSLLILEDVLNP-LSLLPYQPVAMKVLQCVFPVGIGLHEVQPLLKTLQPKTVLC 621
Query: 405 PEEWRTHVSF-SDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLN 463
PEE R H++F S+ SFSV +Y+E ET+ +P K+S+EL+IA D+AS F W+ K++++N
Sbjct: 622 PEELRLHINFSSEKKSFSVLYYTEAETLKVPYRKDSSELKIATDLASHFYWKTFKKEEIN 681
Query: 464 ITRLKGRLFVNHGKHQLLPENEPGGS-SQTRPFLHWGSPDPENLLAELSKMGINGSVERC 522
I +LKG L + +G+H LL +N+ S S R +HWG PD E L+A LSKMGI+G+++
Sbjct: 682 IAKLKGELLMENGRHHLLFDNDNKNSLSNNRSLVHWGLPDSEKLMAALSKMGISGNIQHG 741
Query: 523 MTDAESEDGFTVKVQDPEKSMIEVRAAVTVISAADKNLASRIVKAMENILEGI 575
++DA+S+ V +QDP K+ IE+ T+I+ AD+N+A+ I K ++NIL+G+
Sbjct: 742 VSDAKSQTVCIVHIQDPYKASIEIGTTSTIITTADENVAAFIYKIVDNILDGV 794
>gi|297829304|ref|XP_002882534.1| hypothetical protein ARALYDRAFT_896920 [Arabidopsis lyrata subsp.
lyrata]
gi|297328374|gb|EFH58793.1| hypothetical protein ARALYDRAFT_896920 [Arabidopsis lyrata subsp.
lyrata]
Length = 699
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 302/588 (51%), Positives = 423/588 (71%), Gaps = 13/588 (2%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
MG+LGLPFLT+ GFSAKIY+TEA A+IGQLMME+L+ M+ E+R F+G + SS P W+K
Sbjct: 112 MGLLGLPFLTQNPGFSAKIYMTEATAKIGQLMMEDLVSMHAEFRCFHGPDNSSFPGWIKN 171
Query: 61 EELELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKA 118
+ E +P+ L+K+ GE G +LG + ++ C+ KVQ ++F EE CYNG LIIKA
Sbjct: 172 LDREQVPALLKKVVFGESGDDLGSWMRLYSLDDIESCMKKVQAVKFAEEVCYNGTLIIKA 231
Query: 119 FSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTE 178
SSGLDIGACNW+I+G G+++Y+S S F S HA +FD+ ++G+D+++YSD SSL S E
Sbjct: 232 LSSGLDIGACNWLINGPNGSLSYVSDSIFVSHHARNFDFHGLKGTDVLIYSDFSSLQSAE 291
Query: 179 DIDQSSFSDD-NNNW----EELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPI 233
+ S D +NN+ + +SL N ++S+EEMEKL FICSCA +S AGGS LI I
Sbjct: 292 VTENGCISPDPDNNYISTTSDNKDSLLNTEDSLEEMEKLEFICSCAAESADAGGSTLITI 351
Query: 234 NRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDP 293
R+G+ LQLLE ++ +E SSLK+PI++ISSVAEELLAYTNTIPEWLC+Q+QEKL SG+P
Sbjct: 352 TRIGIVLQLLELMSNSLESSSLKVPIFVISSVAEELLAYTNTIPEWLCEQQQEKLISGEP 411
Query: 294 LFAHVKLIKEKKIHVFPAVHSPKLL----MNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD 349
F H+K IK+KKIH+FPA+HSP L+ +WQEPCI+F+PHWSLRLGP++ LL+RW GD
Sbjct: 412 SFGHLKFIKDKKIHLFPAIHSPNLIYANRTSWQEPCIIFAPHWSLRLGPSVQLLQRWRGD 471
Query: 350 HNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWR 409
SLLVLE+ + + L +LPF+PI+MK+LQCSFLSG +LQK+ LL +LQPK+VL P+
Sbjct: 472 PKSLLVLEDGISSGLGLLPFRPIAMKILQCSFLSGIRLQKLPTLLSVLQPKIVLVPDAVN 531
Query: 410 THVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKK-LNITRLK 468
++F+ + + S+ +Y EN+T+ +P + ++ +EI D+ASK WR L+Q++ I RLK
Sbjct: 532 QRINFAAMKTISILNYFENKTLRVPRIADNPSVEITTDLASKLSWRKLRQRENFGIARLK 591
Query: 469 GRLFVNHGKHQLLPENEPGGSS-QTRPFLHWGSPDPENLLAELSKMGINGSVERCMTDAE 527
G L + GKH+L+ E SS + RP HWGS PE+LL L K+GI GS+E+ + +
Sbjct: 592 GGLLMEDGKHRLVSGLEQEESSGKARPLRHWGSVAPESLLDALLKIGIKGSLEQSIGETG 651
Query: 528 SEDGFTVKVQDPEKSMIEVRAAVTVISAADKNLASRIVKAMENILEGI 575
S+D + + +P +IEV T I D+N+AS++ +A++ IL+GI
Sbjct: 652 SDDNSIIHIANPSSGLIEVSEMGTAIITDDENVASQVFQAIDGILDGI 699
>gi|30680341|ref|NP_187409.2| integrator complex subunit 9 [Arabidopsis thaliana]
gi|332641036|gb|AEE74557.1| integrator complex subunit 9 [Arabidopsis thaliana]
Length = 699
Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust.
Identities = 298/588 (50%), Positives = 414/588 (70%), Gaps = 13/588 (2%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
MG+LGLPFLT+ GF AKIY+TE A+IGQLMME+++ M+ E+R F+G + SS P W+K
Sbjct: 112 MGLLGLPFLTQNPGFFAKIYMTEVTAKIGQLMMEDIVSMHKEFRCFHGPDNSSFPGWIKN 171
Query: 61 EELELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKA 118
+ E +P+ L+K+ GE G +LG + ++ C+ KVQ ++F EE CYNG LIIKA
Sbjct: 172 LDSEQVPALLKKVVFGESGDDLGSWMRLYSLDDIESCMKKVQGVKFAEEVCYNGTLIIKA 231
Query: 119 FSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTE 178
SSGLDIGACNW+I+G G+++Y+S S F S HA FD+ ++ +D+++YSD SSL S E
Sbjct: 232 LSSGLDIGACNWLINGPNGSLSYVSDSIFVSHHARSFDFHGLKETDVLIYSDFSSLQSAE 291
Query: 179 DIDQSSFS-DDNNNWEELM----NSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPI 233
+ S D +NN+ + +SL N ++S+EEMEKLAF+CSCA +S AGGS LI I
Sbjct: 292 VTEDGCISPDSDNNYISTISDNKDSLLNTEDSLEEMEKLAFVCSCAAESADAGGSTLITI 351
Query: 234 NRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDP 293
R+G+ LQLLE ++ +E SSLK+PI++ISSVAEELLAYTNTIPEWLC+QRQEKL SG+P
Sbjct: 352 TRIGIVLQLLELLSNSLESSSLKVPIFVISSVAEELLAYTNTIPEWLCEQRQEKLISGEP 411
Query: 294 LFAHVKLIKEKKIHVFPAVHSPKLL----MNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD 349
F H+K IK KKIH+FPA+HSP L+ +WQEPCIVF+ HWSLRLGP++ LL+RW GD
Sbjct: 412 SFGHLKFIKNKKIHLFPAIHSPNLIYANRTSWQEPCIVFASHWSLRLGPSVQLLQRWRGD 471
Query: 350 HNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWR 409
SLLVLE+ + + L +LPF+PI+MK+LQCSFLSG +LQK+ L+ +LQPK+ L P+
Sbjct: 472 PKSLLVLEDGISSGLGLLPFRPIAMKILQCSFLSGIRLQKLPTLVSVLQPKIFLVPDAVN 531
Query: 410 THVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKK-LNITRLK 468
+S + + + S+ +Y EN+T+H+P + ++ +EI D+ASK WR L+Q++ I RLK
Sbjct: 532 QRISLAAIKTISILNYFENKTLHVPRIVDNPSVEITTDLASKLSWRKLRQRESFGIARLK 591
Query: 469 GRLFVNHGKHQLLPENEPGGSS-QTRPFLHWGSPDPENLLAELSKMGINGSVERCMTDAE 527
G L + GKH+L+ E SS + RP HWGS PE LL L KMGI GS+E+ D
Sbjct: 592 GGLLMEDGKHRLVSGLEQEESSGKARPLRHWGSVAPELLLDALLKMGIKGSIEQSTGDNG 651
Query: 528 SEDGFTVKVQDPEKSMIEVRAAVTVISAADKNLASRIVKAMENILEGI 575
SED + +++P +IE T I D+N+ S++ +A++ +L+GI
Sbjct: 652 SEDKSIIHIENPNSGLIEFSEMGTAIITGDENVVSQVFQAIDGVLDGI 699
>gi|147863921|emb|CAN78953.1| hypothetical protein VITISV_004722 [Vitis vinifera]
Length = 665
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 316/604 (52%), Positives = 384/604 (63%), Gaps = 95/604 (15%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
MGMLGLPFL+R+ GF AKIY+TE ARIGQL+ME+L+ MN E+RQFYG EES PQWM W
Sbjct: 128 MGMLGLPFLSRVNGFRAKIYVTEVTARIGQLLMEDLVLMNKEFRQFYGCEESGLPQWMNW 187
Query: 61 EELELLPSALRKIALGEDGSELGGGCPCIA--HVKDCISKVQTLRFGEEACYNGILIIKA 118
E+LE LPS R+I LGEDG ELGG P + VK CI KV TL++ +E CYNG LIIKA
Sbjct: 188 EKLESLPSLFREIVLGEDGVELGGWMPLYSADDVKGCIQKVHTLKYAQEVCYNGTLIIKA 247
Query: 119 FSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTE 178
SSGL+IG CNW I+G K NIA S F S HAM+FDY A++G+DLI+YSDLSS
Sbjct: 248 VSSGLEIGTCNWTINGPKRNIACXXSSIFNSSHAMNFDYHALRGNDLIIYSDLSS----- 302
Query: 179 DIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAI-------DSVKAGGSVLI 231
V EM + + + DSVKAGGSVLI
Sbjct: 303 --------------------------PVLEMSRTTAVTLHQLVRNPQLSDSVKAGGSVLI 336
Query: 232 PINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSG 291
PI R+G+ LQLLE I++ +E SSLK+PI+IISSVAEELLA+TN IPEWLCKQRQEK
Sbjct: 337 PIGRLGIILQLLELISLSLEASSLKVPIFIISSVAEELLAFTNIIPEWLCKQRQEK---- 392
Query: 292 DPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHN 351
EPCI FSPHWSLRLGP +HLLRRWSGD N
Sbjct: 393 -------------------------------EPCIAFSPHWSLRLGPVVHLLRRWSGDEN 421
Query: 352 SLLVLENEVDAELAVLPFKPISMK-------------------VLQCSFLSGKKLQKVQP 392
SLL++E VDA+LA+LPFKP++MK ++ G LQKVQP
Sbjct: 422 SLLIMEEGVDADLALLPFKPMAMKEVFRLDDLHSQYFGIDHSLNMRHLMFPGPLLQKVQP 481
Query: 393 LLKILQPKLVLFPEEWRTHVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKF 452
LLKILQPK VLFPE+ R VS+SD S + +Y ENET+ +PSLK S+ELEIAAD+ S
Sbjct: 482 LLKILQPKFVLFPEDLRQLVSYSDTNSHAFFYYCENETLPVPSLKNSSELEIAADLVSLI 541
Query: 453 QWRMLKQKKLNITRLKGRLFVNHGKHQLLPENEPGGSSQTR-PFLHWGSPDPENLLAELS 511
R L + + I RLKG V HGKHQL +E SSQ+R P LHWGS D E LLA L
Sbjct: 542 HCRRLTAESIGIGRLKGDFSVTHGKHQLHSGSEQADSSQSRPPLLHWGSLDLERLLAVLE 601
Query: 512 KMGINGSVERCMTDAESEDGFTVKVQDPEKSMIEVRAAVTVISAADKNLASRIVKAMENI 571
KMGI GSVE+ D +SE+ V V +P K++IEVR T+ISA++++L+S I +A++ I
Sbjct: 602 KMGIRGSVEQGNXDTDSENARVVHVYEPNKALIEVRENSTIISASNESLSSLIFEAVDGI 661
Query: 572 LEGI 575
L G+
Sbjct: 662 LSGL 665
>gi|357456769|ref|XP_003598665.1| Integrator complex subunit [Medicago truncatula]
gi|355487713|gb|AES68916.1| Integrator complex subunit [Medicago truncatula]
Length = 536
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 267/527 (50%), Positives = 362/527 (68%), Gaps = 41/527 (7%)
Query: 90 AHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFAS 149
A VKD I K+ TL + +EACYNG L+IKAFSSG++IG+ NW ++G KG+IAY+S S F S
Sbjct: 10 ADVKDSIQKINTLNYAQEACYNGTLVIKAFSSGVEIGSSNWTLNGPKGDIAYLSSSCFFS 69
Query: 150 GHAMDFDYRAIQGSDLILYSDLSSLDSTEDI-DQSSFSDDNNN------WEELMNSLSNY 202
HAM FDY ++Q + ++YSD SSL +D+ D +++D ++ +E+ +
Sbjct: 70 AHAMAFDYSSLQRTSTLIYSDFSSLIDAQDVEDGDNYTDPTSDKLLPPSFEDSDGFSLDS 129
Query: 203 DESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYII 262
D +++E EKL FICSCAI+ VK GGSVLIPINR+G LQLLE++A +E S++++PIYII
Sbjct: 130 DVNLDEKEKLVFICSCAIECVKDGGSVLIPINRLGTILQLLEEMATLLEASAMEVPIYII 189
Query: 263 SSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQ 322
SSVAEELLA N IPEWL KQRQE+LF+G+PLF HVKL+KEKKI V P +HS +LL +WQ
Sbjct: 190 SSVAEELLALLNIIPEWLSKQRQERLFAGEPLFDHVKLLKEKKIRVVPNIHSHQLLKDWQ 249
Query: 323 EPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAELAVLPFKPISMKVLQCSFL 382
EPCIVF PHWSLR+GP +HLLRRW GD SLL+LE+ V+ ELA+LPFKP+ MKVLQC F
Sbjct: 250 EPCIVFCPHWSLRMGPIVHLLRRWCGDPKSLLILEDMVNPELALLPFKPVEMKVLQCLFP 309
Query: 383 SGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTSFSVSHYSENETIHIP-------- 434
SG LQK+QPLLK LQPK +LFPE+ R + FS SFSVS+Y+E ET+ +P
Sbjct: 310 SGIGLQKLQPLLKTLQPKTILFPEDLRLKMCFSCEKSFSVSYYTEAETLKVPCQKESSEL 369
Query: 435 ------------------------SLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
KES+EL+I AD+AS+F W+ K++ +N+T+LKG+
Sbjct: 370 KMSFSCEKSFSVSYCTEPETLKVFCQKESSELKIEADLASQFYWKTFKKEGINVTKLKGK 429
Query: 471 LFVNHGKHQLLPENEPGGSSQTRPFLHWGSPDPENLLAELSKMGINGSVERCMTDAESED 530
L + +G+H LL +N+ S + + G D L+ ELSKMGIN S+E D ES++
Sbjct: 430 LLMENGRHHLLLDNDKKTSLRNSSLVRCGLTDYHKLIPELSKMGINASMELIKDDVESQN 489
Query: 531 GFTVKVQDPEKSMIEVRAAVTVISAA--DKNLASRIVKAMENILEGI 575
V ++P K++IE+ TVI+ A D N+AS + KA++NI++G+
Sbjct: 490 VCLVHTEEPYKALIEIGKTSTVITTAESDANVASILYKAIDNIMDGV 536
>gi|414879106|tpg|DAA56237.1| TPA: hypothetical protein ZEAMMB73_928273 [Zea mays]
Length = 673
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 254/595 (42%), Positives = 384/595 (64%), Gaps = 27/595 (4%)
Query: 2 GMLGLPFLTRMEGFS-AKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
GMLGLPFLT + GF+ K+Y+TE AARIG+ MMEEL+ M+ E+ ++YG + + P+WM+
Sbjct: 85 GMLGLPFLTGLPGFTNTKVYVTEVAARIGKPMMEELVEMHREFVRYYGPDTDASPKWMEG 144
Query: 61 EELELLPSALRKIALGEDGSELGGGCPCIA--HVKDCISKVQTLRFGEEACYNGILIIKA 118
EEL L S +K + ++L P + +V++C+ KVQ++++GEE C+NGI ++KA
Sbjct: 145 EELNELMSMSQKAVIEGRENDLTSLVPLYSPGNVEECMHKVQSVKYGEEVCFNGIFMLKA 204
Query: 119 FSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTE 178
SSGL++G W I + +I Y+ S F S HA+DFDY +++ +D+IL+SD SSL+ T+
Sbjct: 205 SSSGLELGNSTWTIQSPRASITYLPSSVFVSAHALDFDYSSLKENDVILFSDFSSLNDTD 264
Query: 179 DIDQ-----------------SSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAID 221
+ ++ S F DD + +E + + N D+ EE+E+++FICSC
Sbjct: 265 EDNEKLNEHSMDETDSSLCRYSVFRDDGADADERVPFVCNNDDITEEIERISFICSCIFG 324
Query: 222 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLC 281
+VK+GGSVLIPI R+GV L LLE I+ + SSLK+PI++IS AEE+ A+TNT+PEWLC
Sbjct: 325 AVKSGGSVLIPIGRLGVILLLLELISEMLHSSSLKVPIFVISETAEEIFAFTNTLPEWLC 384
Query: 282 KQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIH 341
K RQEKLF+G+ LF HV+L+KE K+ +FP +HS LL W+EPCIV PHWSLRLGP +H
Sbjct: 385 KSRQEKLFAGEALFGHVELLKEGKLFLFPHLHSKGLLAAWKEPCIVLCPHWSLRLGPAVH 444
Query: 342 LLRRWSGDHNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKL 401
LLRRW D LLV+E AEL++ PF P++++VL+CSFLSG + K+ PLL +L+PK
Sbjct: 445 LLRRWHADKRCLLVVEQGNGAELSLKPFMPLAIQVLECSFLSGVRAGKIDPLLGVLKPKF 504
Query: 402 VLFPEEWRTHVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKK 461
V+ PE ++ S V +S +YS+ +TI + +L+E E+ +A D+A + Q R L +
Sbjct: 505 VMLPEGLKSRCSIKGV-PWSFLYYSKGKTIELSNLREDIEVHLATDVAFRLQPRQLNETT 563
Query: 462 LNITRLKGRLFVNHGKHQLL-PENEPGGSSQTRPFLHWGSPDPENLLAELSKMGINGSVE 520
+ RL+ +L V++G++QL E +P S R LH + DP LL+ L + G+ S
Sbjct: 564 -AVARLRTKLLVSNGRYQLASAEKQPDQSK--RHLLHCSTIDPGRLLSALREKGMVCSF- 619
Query: 521 RCMTDAESEDGFTVKVQDPEKSMIEVRAAVTVISAADKNLASRIVKAMENILEGI 575
D+ + +V V P +++ + TVI D+ +++I A+ ++ +GI
Sbjct: 620 -AADDSPTASESSVLVTSPGDALVRITPDTTVIYCDDERTSNQIYDALSSVCKGI 673
>gi|357126424|ref|XP_003564887.1| PREDICTED: LOW QUALITY PROTEIN: integrator complex subunit 9
homolog [Brachypodium distachyon]
Length = 707
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 248/604 (41%), Positives = 387/604 (64%), Gaps = 40/604 (6%)
Query: 2 GMLGLPFLTRMEGFS-AKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
GMLGLPFLTR+ F+ K+Y+TE AARIG+LMM EL+ M+ E+ ++YG + P+WM+
Sbjct: 114 GMLGLPFLTRLPCFANTKVYVTELAARIGKLMMRELVEMHSEFVRYYGPDIDGPPKWMEG 173
Query: 61 EELELLPSALRKIALGEDGSELGGGCPCIA--HVKDCISKVQTLRFGEEACYNGILIIKA 118
E+L+ L S L+K+ ++ +L P + + +C+ K Q +++ EE C+NG+L++KA
Sbjct: 174 EKLDKLMSVLQKVVNEDEVKDLAPFMPLYSATSIDECMQKTQPVKYSEEVCFNGMLMLKA 233
Query: 119 FSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTE 178
SSGL++G C W I G + +I +S + F S HA+DFDY +++ +D+IL+SD SSL++ +
Sbjct: 234 SSSGLELGNCVWSIKGPRASITCLSSTVFVSAHALDFDYNSLKENDIILFSDFSSLNAMD 293
Query: 179 DIDQS---SFSDDNN--------------------NWEELMNSLSNYDESVEEMEKLAFI 215
+ +++ + +D+N N ++ LS D+ +E+E++ FI
Sbjct: 294 EDNENLNVNGTDENGTLLCDDSVLSYFKSSRENGVNEDKNFQCLSINDDIADEIERIGFI 353
Query: 216 CSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKI--PIYIISSVAEELLAYT 273
CSC +D++K+GGSVLIPI R+GV L +LE I+ + S++K+ PI++IS AE+ +A+T
Sbjct: 354 CSCIMDAIKSGGSVLIPIGRLGVILLILEYISETLHFSNMKVIVPIFMISGAAEKTIAFT 413
Query: 274 NTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWS 333
N +PEWLCK RQEKLFSG+ LF HV+L+KE ++ +FP ++S LL W+EPCIVF PHWS
Sbjct: 414 NAVPEWLCKPRQEKLFSGEALFGHVELLKEGRLFLFPHLYSKGLLSAWKEPCIVFCPHWS 473
Query: 334 LRLGPTIHLLRRWSGDHNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPL 393
LR G +HLLRRW D +LLVLE DAELA+ PF P++M+VL+CSFLSG K +KV PL
Sbjct: 474 LRHGTAVHLLRRWHADKRNLLVLEQGFDAELALKPFMPVAMQVLECSFLSGIKARKVNPL 533
Query: 394 LKILQPKLVLFPEEWRTHVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQ 453
L+IL+PKL+LFPE ++ + + +S HYS+ +TI IP+++E +L ++ D A
Sbjct: 534 LRILKPKLILFPECMKSTCPLKEDSPWSFLHYSKGKTIGIPNIREEFKLRLSTDAAFGL- 592
Query: 454 WRMLKQKKLNITRLKGRLFVNHGKHQLL-PENEPGGSSQTRPFLHWGSPDPENLLAELSK 512
+ + I RL+G+L +++G++ L+ P+++ Q +HWG+ D + L+ L
Sbjct: 593 -----DENITIARLRGKLHLSNGQYVLVAPKDQSDRPKQQ--LMHWGAVDSDRALSALQD 645
Query: 513 MGINGSVER-CMTDAESEDGFTVKVQDPEKSMIEVRAAVTVISAADKNLASRIVKAMENI 571
GI S C + E ++ V P +++++V + TVI D+ RI A +I
Sbjct: 646 RGIVCSFSADCYSSVGCER--SILVTSPGEALVKVTSERTVIYCDDEKTTKRIYDAFSSI 703
Query: 572 LEGI 575
GI
Sbjct: 704 CNGI 707
>gi|222624545|gb|EEE58677.1| hypothetical protein OsJ_10103 [Oryza sativa Japonica Group]
Length = 713
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 249/598 (41%), Positives = 379/598 (63%), Gaps = 26/598 (4%)
Query: 2 GMLGLPFLTRMEGFS-AKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
G+LGLPFLTR GF+ K+Y+TE AAR+G LMM EL+ M+ E+ + YG + P WM+
Sbjct: 118 GLLGLPFLTRFPGFANTKVYVTEVAARMGSLMMRELVEMHREFVRCYGPDRDQSPVWMEG 177
Query: 61 EELELLPSALRKIAL-GEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIK 117
E+L+ L S L+KI E+ + L + ++++C+ K Q +++GEE C+NG+L++K
Sbjct: 178 EKLKKLMSVLQKITTEDEENNNLAALVSLYSLDNIEECMQKTQYVKYGEEVCFNGMLMLK 237
Query: 118 AFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDST 177
A SSGL++G C W I G + ++ Y+ S F S HA+DFDY +++G+D+IL+SD SSL+
Sbjct: 238 ASSSGLELGNCVWTIKGPRASMTYLPSSIFVSAHALDFDYSSLKGNDVILFSDFSSLNGM 297
Query: 178 ED---------IDQ--------SSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAI 220
D +D+ S F DD + +E + L + D+ EE+E+++FICSC I
Sbjct: 298 YDDNKKMGEHIVDETDILLASNSVFRDDGMDEDETIKFLCSNDDIAEEIERISFICSCII 357
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK--IPIYIISSVAEELLAYTNTIPE 278
D++ +GGSVLIPI R+G+ L LLE ++ + S++K +PI++IS AEE++ +TN +PE
Sbjct: 358 DAINSGGSVLIPIGRIGIILLLLEHMSETLHSSNMKSQVPIFMISETAEEIITFTNALPE 417
Query: 279 WLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGP 338
WLCK RQEKLFS +PLF HV+L+KE K+ +F ++S LL W+EPCIVF PHWSLR GP
Sbjct: 418 WLCKSRQEKLFSCEPLFGHVELLKEGKLSLFSHLYSKGLLAAWKEPCIVFCPHWSLRHGP 477
Query: 339 TIHLLRRWSGDHNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQ 398
+HLL RW D LLVLE VDAEL + PF P++++VL CSFLSG K+ K+ PLL +L+
Sbjct: 478 AVHLLHRWRADKRCLLVLEQGVDAELTLKPFMPLAIQVLGCSFLSGIKVGKIDPLLGLLK 537
Query: 399 PKLVLFPEEWRTHVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLK 458
PKL+LFPE ++ +D +S +YS+ +TI +P+++E E+ + ++A Q R L
Sbjct: 538 PKLILFPEGQKSLCPATDKQPWSFLYYSKGKTIEVPNMREEFEVRMTTEVAFGLQPRQL- 596
Query: 459 QKKLNITRLKGRLFVNHGKHQLLPENEPGGSSQTRPFLHWGSPDPENLLAELSKMGINGS 518
K + RLK +L +++G++ L S+ R LHWG+ D + + L + GI S
Sbjct: 597 DKTTAVARLKAKLLLSNGQYVLAAAKSELDRSE-RHLLHWGTVDASCIPSALQEKGIVCS 655
Query: 519 VER-CMTDAESEDGFTVKVQDPEKSMIEVRAAVTVISAADKNLASRIVKAMENILEGI 575
A S+ + + P +++++V + T I D+ A R+ A+ +I GI
Sbjct: 656 FSADADYSAPSDRERVISITSPGEALVKVTSERTTIYCDDEETAERVYDALRSICNGI 713
>gi|218192422|gb|EEC74849.1| hypothetical protein OsI_10713 [Oryza sativa Indica Group]
Length = 713
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 249/598 (41%), Positives = 379/598 (63%), Gaps = 26/598 (4%)
Query: 2 GMLGLPFLTRMEGFS-AKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
G+LGLPFLTR+ GF+ K+Y+TE AAR+G LMM EL+ M+ E+ + YG + P WM+
Sbjct: 118 GLLGLPFLTRLPGFANTKVYVTEVAARMGSLMMRELVEMHREFVRCYGPDRDQSPVWMEG 177
Query: 61 EELELLPSALRKIAL-GEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIK 117
E+L+ L S L+KI E+ + L + ++++C+ K Q +++GEE C+NG+L++K
Sbjct: 178 EKLKKLMSVLQKITTEDEENNNLAALVSLYSLDNIEECMQKTQYVKYGEEVCFNGMLMLK 237
Query: 118 AFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDST 177
A SSGL++G C W I G + ++ Y+ S F S HA+DFDY +++G+D+IL+SD SSL+
Sbjct: 238 ASSSGLELGNCVWTIKGPRASMTYLPSSIFVSAHALDFDYSSLKGNDVILFSDFSSLNGM 297
Query: 178 ED---------IDQ--------SSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAI 220
D +D+ S F DD + +E + L + D+ EE+E+++FICSC I
Sbjct: 298 YDDNKKMGEHIVDETDILLASNSVFRDDGMDEDETIKFLCSNDDIAEEIERISFICSCII 357
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK--IPIYIISSVAEELLAYTNTIPE 278
D++ +GGSVLIPI R+G+ L LLE ++ + S++K +PI++IS AEE++ +TN +PE
Sbjct: 358 DAINSGGSVLIPIGRIGIILLLLEHMSETLHSSNMKSQVPIFMISETAEEIITFTNALPE 417
Query: 279 WLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGP 338
WLCK RQEKLFS +PLF HV+L+KE K+ +F ++S LL W+EPCIVF PHWSLR GP
Sbjct: 418 WLCKSRQEKLFSCEPLFGHVELLKEGKLSLFSHLYSKGLLAAWKEPCIVFCPHWSLRHGP 477
Query: 339 TIHLLRRWSGDHNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQ 398
+HLL RW D LLVLE VDAEL + PF P++++VL CSFLSG K+ K+ PLL +L+
Sbjct: 478 AVHLLHRWRADKRCLLVLEQGVDAELTLKPFMPLAIQVLGCSFLSGIKVGKIDPLLGLLK 537
Query: 399 PKLVLFPEEWRTHVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLK 458
PKL+LFPE ++ +D +S +YS+ +TI +P+++E E+ + ++A Q R L
Sbjct: 538 PKLILFPEGQKSLCPATDKQPWSFLYYSKGKTIEVPNMREEFEVRMTTEVAFGLQPRQL- 596
Query: 459 QKKLNITRLKGRLFVNHGKHQLLPENEPGGSSQTRPFLHWGSPDPENLLAELSKMGINGS 518
K + RLK +L +++G++ L S+ R LHWG+ D + + L + GI S
Sbjct: 597 DKTTAVARLKAKLLLSNGQYVLAAAKSELDRSE-RHLLHWGTVDASCIPSALQEKGIVCS 655
Query: 519 VER-CMTDAESEDGFTVKVQDPEKSMIEVRAAVTVISAADKNLASRIVKAMENILEGI 575
A S+ + + P +++++V + T I D+ A R+ A +I GI
Sbjct: 656 FSADADYSAPSDRERVISITSPGEALVKVTSERTTIYCDDEETAERVYDAFRSICNGI 713
>gi|108707119|gb|ABF94914.1| expressed protein [Oryza sativa Japonica Group]
Length = 719
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 249/604 (41%), Positives = 380/604 (62%), Gaps = 32/604 (5%)
Query: 2 GMLGLPFLTRMEGFS-AKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
G+LGLPFLTR GF+ K+Y+TE AAR+G LMM EL+ M+ E+ + YG + P WM+
Sbjct: 118 GLLGLPFLTRFPGFANTKVYVTEVAARMGSLMMRELVEMHREFVRCYGPDRDQSPVWMEG 177
Query: 61 EELELLPSALRKIAL-GEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIK 117
E+L+ L S L+KI E+ + L + ++++C+ K Q +++GEE C+NG+L++K
Sbjct: 178 EKLKKLMSVLQKITTEDEENNNLAALVSLYSLDNIEECMQKTQYVKYGEEVCFNGMLMLK 237
Query: 118 AFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDST 177
A SSGL++G C W I G + ++ Y+ S F S HA+DFDY +++G+D+IL+SD SSL+
Sbjct: 238 ASSSGLELGNCVWTIKGPRASMTYLPSSIFVSAHALDFDYSSLKGNDVILFSDFSSLNGM 297
Query: 178 ED---------IDQS--------------SFSDDNNNWEELMNSLSNYDESVEEMEKLAF 214
D +D++ SF DD + +E + L + D+ EE+E+++F
Sbjct: 298 YDDNKKMGEHIVDETDILLASNSVFSTEKSFRDDGMDEDETIKFLCSNDDIAEEIERISF 357
Query: 215 ICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK--IPIYIISSVAEELLAY 272
ICSC ID++ +GGSVLIPI R+G+ L LLE ++ + S++K +PI++IS AEE++ +
Sbjct: 358 ICSCIIDAINSGGSVLIPIGRIGIILLLLEHMSETLHSSNMKSQVPIFMISETAEEIITF 417
Query: 273 TNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHW 332
TN +PEWLCK RQEKLFS +PLF HV+L+KE K+ +F ++S LL W+EPCIVF PHW
Sbjct: 418 TNALPEWLCKSRQEKLFSCEPLFGHVELLKEGKLSLFSHLYSKGLLAAWKEPCIVFCPHW 477
Query: 333 SLRLGPTIHLLRRWSGDHNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQP 392
SLR GP +HLL RW D LLVLE VDAEL + PF P++++VL CSFLSG K+ K+ P
Sbjct: 478 SLRHGPAVHLLHRWRADKRCLLVLEQGVDAELTLKPFMPLAIQVLGCSFLSGIKVGKIDP 537
Query: 393 LLKILQPKLVLFPEEWRTHVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKF 452
LL +L+PKL+LFPE ++ +D +S +YS+ +TI +P+++E E+ + ++A
Sbjct: 538 LLGLLKPKLILFPEGQKSLCPATDKQPWSFLYYSKGKTIEVPNMREEFEVRMTTEVAFGL 597
Query: 453 QWRMLKQKKLNITRLKGRLFVNHGKHQLLPENEPGGSSQTRPFLHWGSPDPENLLAELSK 512
Q R L K + RLK +L +++G++ L S+ R LHWG+ D + + L +
Sbjct: 598 QPRQL-DKTTAVARLKAKLLLSNGQYVLAAAKSELDRSE-RHLLHWGTVDASCIPSALQE 655
Query: 513 MGINGSVER-CMTDAESEDGFTVKVQDPEKSMIEVRAAVTVISAADKNLASRIVKAMENI 571
GI S A S+ + + P +++++V + T I D+ A R+ A+ +I
Sbjct: 656 KGIVCSFSADADYSAPSDRERVISITSPGEALVKVTSERTTIYCDDEETAERVYDALRSI 715
Query: 572 LEGI 575
GI
Sbjct: 716 CNGI 719
>gi|242055337|ref|XP_002456814.1| hypothetical protein SORBIDRAFT_03g043310 [Sorghum bicolor]
gi|241928789|gb|EES01934.1| hypothetical protein SORBIDRAFT_03g043310 [Sorghum bicolor]
Length = 557
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/562 (40%), Positives = 358/562 (63%), Gaps = 24/562 (4%)
Query: 33 MEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCP--CIA 90
MEEL+ M+ E+ ++YG + P+WM+ +E L S L+K + + ++ P +
Sbjct: 1 MEELVEMHYEFVRYYGPDTDVSPKWMEGKEFNELMSMLQKAVIEDKENDSACLVPLYSLG 60
Query: 91 HVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASG 150
++++C+ KVQ +++GEE C+NGI ++KA SSGL++G W I G + +I Y+ S F S
Sbjct: 61 NIEECMHKVQPVKYGEEVCFNGIFMLKASSSGLELGNSTWEIKGPRASITYLPSSVFVSA 120
Query: 151 HAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQ-----------------SSFSDDNNNWE 193
HA+DFDY +++ +D+IL+SD SSL+ ++ ++ S DD + +
Sbjct: 121 HALDFDYSSLKENDVILFSDFSSLNDMDEDNEKLNEHSMDETDSSLCHYSVLRDDGADAD 180
Query: 194 ELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECS 253
E + + N D+ EE+E+++FICSC D+VK+GGSVLIPI R+GV L LLE I+ + S
Sbjct: 181 EKVPFVCNNDDITEEIERISFICSCIFDAVKSGGSVLIPIGRLGVILLLLELISEMLHSS 240
Query: 254 SLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVH 313
S+K+PI++IS AEE+ A+TN +PEWLCK RQEKLF+G+ LF HV+L+KE K+ +FP +H
Sbjct: 241 SMKVPIFVISETAEEIFAFTNALPEWLCKSRQEKLFAGEALFGHVELLKEGKLFLFPHLH 300
Query: 314 SPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAELAVLPFKPIS 373
S LL W+EPCIV PHWSLRLGP +HLLRRW D LLV+E DAEL++ PF P++
Sbjct: 301 SKGLLAAWKEPCIVLCPHWSLRLGPAVHLLRRWHADKRCLLVVEQGNDAELSLKPFMPLA 360
Query: 374 MKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTSFSVSHYSENETIHI 433
++VL+CSFLSG ++ K+ PLL++L+PK VL PE ++ +V +S +YS+ +TI +
Sbjct: 361 IQVLECSFLSGIRVGKIDPLLRMLKPKFVLLPEGLKSRCPIQEVP-WSFFYYSKGKTIEL 419
Query: 434 PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQLLPENEPGGSSQTR 493
P+L+E E+ +A D+A + Q R L + + RL+ +L V++G+ QL + S+ R
Sbjct: 420 PNLREEFEVHLATDVAFRLQPRQLNETT-AVARLRTKLLVSNGRFQLASAEKQSDQSK-R 477
Query: 494 PFLHWGSPDPENLLAELSKMGINGSVERCMTDAESEDGFTVKVQDPEKSMIEVRAAVTVI 553
LH + DP LL+ L + G+ S D+ + +V + P +++++ + TVI
Sbjct: 478 HLLHCSTIDPGRLLSALQEKGMVCSF--AADDSSTASECSVLITSPGDALVKITSDRTVI 535
Query: 554 SAADKNLASRIVKAMENILEGI 575
++ ++I A+ ++ +GI
Sbjct: 536 YCDNERTCNQIYDALSSVCKGI 557
>gi|297788079|ref|XP_002862209.1| hypothetical protein ARALYDRAFT_359763 [Arabidopsis lyrata subsp.
lyrata]
gi|297307472|gb|EFH38467.1| hypothetical protein ARALYDRAFT_359763 [Arabidopsis lyrata subsp.
lyrata]
Length = 452
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/397 (50%), Positives = 287/397 (72%), Gaps = 6/397 (1%)
Query: 185 FSDDN----NNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
FS+ N +N + +SL N ++S+EEM+KL FICSCA +S AGGS LI I R+G+ L
Sbjct: 6 FSERNILYIHNSSDNKDSLLNTEDSLEEMDKLEFICSCAAESSDAGGSTLITITRIGIVL 65
Query: 241 QLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKL 300
QLLE ++ +E SSLK+PI++ISSVAEELLAYTNTIPEWLC+QRQEKL G+P F H+K
Sbjct: 66 QLLELMSNSLESSSLKVPIFVISSVAEELLAYTNTIPEWLCEQRQEKLILGEPSFGHLKF 125
Query: 301 IKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEV 360
IK+KKIH+FPA+HSP L+ +WQEPCI+F+PHWSLRLGP++ LL+RW GD SLLVLE+ +
Sbjct: 126 IKDKKIHLFPAIHSPNLITSWQEPCIIFAPHWSLRLGPSVQLLQRWRGDPKSLLVLEDGI 185
Query: 361 DAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTSF 420
+ L +LPF+PI+MK+LQCSFLSG +LQK+ LL +LQPK+VL P+ ++F+ + +
Sbjct: 186 SSGLGLLPFRPIAMKILQCSFLSGIRLQKLPTLLSVLQPKIVLVPDAVNQRINFAAMKTI 245
Query: 421 SVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKK-LNITRLKGRLFVNHGKHQ 479
S+ +Y EN+T+ +P + ++ +EI D+ASK WR L+Q++ I RLKG L + GKH+
Sbjct: 246 SILNYFENKTLRVPRIADNPSVEITTDLASKLSWRKLRQRENFGIARLKGGLLMEDGKHR 305
Query: 480 LLPENEPGGSS-QTRPFLHWGSPDPENLLAELSKMGINGSVERCMTDAESEDGFTVKVQD 538
L+ E SS + RP HWGS PE+LL L K+GI GS+E+ + + S+D + + +
Sbjct: 306 LVSGLEQEESSGKARPLRHWGSVAPESLLDALLKIGIQGSLEQSIGETGSDDNSIIHIAN 365
Query: 539 PEKSMIEVRAAVTVISAADKNLASRIVKAMENILEGI 575
P +IEV T I D+N+ S++++A++ IL+ +
Sbjct: 366 PSSGLIEVSEMGTAIITDDENVGSQVLQAIDGILDAL 402
>gi|293333207|ref|NP_001167979.1| hypothetical protein [Zea mays]
gi|223945265|gb|ACN26716.1| unknown [Zea mays]
gi|414879104|tpg|DAA56235.1| TPA: hypothetical protein ZEAMMB73_928273 [Zea mays]
gi|414879105|tpg|DAA56236.1| TPA: hypothetical protein ZEAMMB73_928273 [Zea mays]
Length = 492
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/498 (42%), Positives = 320/498 (64%), Gaps = 24/498 (4%)
Query: 96 ISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDF 155
+ KVQ++++GEE C+NGI ++KA SSGL++G W I + +I Y+ S F S HA+DF
Sbjct: 1 MHKVQSVKYGEEVCFNGIFMLKASSSGLELGNSTWTIQSPRASITYLPSSVFVSAHALDF 60
Query: 156 DYRAIQGSDLILYSDLSSLDSTEDIDQ-----------------SSFSDDNNNWEELMNS 198
DY +++ +D+IL+SD SSL+ T++ ++ S F DD + +E +
Sbjct: 61 DYSSLKENDVILFSDFSSLNDTDEDNEKLNEHSMDETDSSLCRYSVFRDDGADADERVPF 120
Query: 199 LSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIP 258
+ N D+ EE+E+++FICSC +VK+GGSVLIPI R+GV L LLE I+ + SSLK+P
Sbjct: 121 VCNNDDITEEIERISFICSCIFGAVKSGGSVLIPIGRLGVILLLLELISEMLHSSSLKVP 180
Query: 259 IYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLL 318
I++IS AEE+ A+TNT+PEWLCK RQEKLF+G+ LF HV+L+KE K+ +FP +HS LL
Sbjct: 181 IFVISETAEEIFAFTNTLPEWLCKSRQEKLFAGEALFGHVELLKEGKLFLFPHLHSKGLL 240
Query: 319 MNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAELAVLPFKPISMKVLQ 378
W+EPCIV PHWSLRLGP +HLLRRW D LLV+E AEL++ PF P++++VL+
Sbjct: 241 AAWKEPCIVLCPHWSLRLGPAVHLLRRWHADKRCLLVVEQGNGAELSLKPFMPLAIQVLE 300
Query: 379 CSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTSFSVSHYSENETIHIPSLKE 438
CSFLSG + K+ PLL +L+PK V+ PE ++ S V +S +YS+ +TI + +L+E
Sbjct: 301 CSFLSGVRAGKIDPLLGVLKPKFVMLPEGLKSRCSIKGV-PWSFLYYSKGKTIELSNLRE 359
Query: 439 SAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQLL-PENEPGGSSQTRPFLH 497
E+ +A D+A + Q R L + + RL+ +L V++G++QL E +P S R LH
Sbjct: 360 DIEVHLATDVAFRLQPRQLNETT-AVARLRTKLLVSNGRYQLASAEKQPDQSK--RHLLH 416
Query: 498 WGSPDPENLLAELSKMGINGSVERCMTDAESEDGFTVKVQDPEKSMIEVRAAVTVISAAD 557
+ DP LL+ L + G+ S D+ + +V V P +++ + TVI D
Sbjct: 417 CSTIDPGRLLSALREKGMVCSF--AADDSPTASESSVLVTSPGDALVRITPDTTVIYCDD 474
Query: 558 KNLASRIVKAMENILEGI 575
+ +++I A+ ++ +GI
Sbjct: 475 ERTSNQIYDALSSVCKGI 492
>gi|302784170|ref|XP_002973857.1| hypothetical protein SELMODRAFT_414250 [Selaginella moellendorffii]
gi|300158189|gb|EFJ24812.1| hypothetical protein SELMODRAFT_414250 [Selaginella moellendorffii]
Length = 1497
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 192/604 (31%), Positives = 319/604 (52%), Gaps = 46/604 (7%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEE-SSGPQWMKWE 61
ML LPFLTR F+AKI+ T A +G+L+M+EL+ + ++ + YGA + P++ + E
Sbjct: 909 MLALPFLTRNPDFTAKIFATYPTATVGKLLMQELVSSHRDFLKLYGASSLENHPEFTQCE 968
Query: 62 ELELLPSALRKIALGEDGSELGGGCPCIA--HVKDCISKVQTLRFGEEACYNGILIIKAF 119
+P AL+ LGE S + + V C+ ++QTLR+GEEA +G +++ +
Sbjct: 969 ----VPEALKDCLLGEHNSGILNWHKLYSAEDVLGCMERIQTLRYGEEAPIDGCVVLTPY 1024
Query: 120 SSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDF--DYRAIQGSDLILYSDLSSLDST 177
SSG IGA NW+I G ++ Y+S + A+ A D ++ GS ++L S S
Sbjct: 1025 SSGQGIGASNWVIKGPCSSVTYVSSCDVAAAAASCASQDLTSLDGSQVLLVSAKQPTSSV 1084
Query: 178 EDIDQSS-------------------FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSC 218
E ++ + F +N + NS+ + ++ LA + +
Sbjct: 1085 EKLEMDTEAEPRSRLTTRPWVNARVEFITSHNAKPRMANSVLSEKREPQQRSLLAQVANA 1144
Query: 219 AIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPE 278
A D++ GGSVLIP + L+L+E I+ + C+ + I +S A+E LA+TNT+PE
Sbjct: 1145 AADALSKGGSVLIPTSVSDTVLELIETISQEVSCAKVSGRILYVSPSAQEFLAFTNTVPE 1204
Query: 279 WLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGP 338
WL RQEKL++G+ LF HV+L+KE K+ FP++ SP+++ + PC++ + H SLR+GP
Sbjct: 1205 WLSSARQEKLYNGESLFGHVELLKEGKLSYFPSL-SPEVVESG--PCVILASHVSLRMGP 1261
Query: 339 TIHLLRRWSGDHNSLLVL-ENEVDAELAVLPFKPISMKVLQCSF-LSGKKLQKVQPLLKI 396
++H+L RW ++LL+L E ++D E +LPFKP+S++V S + + L+
Sbjct: 1262 SVHILNRWRQHSSNLLILTEPDIDVERFLLPFKPLSIQVKHFPLATSARSRGALSSLIDR 1321
Query: 397 LQPKLVLFPEEWRTHVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRM 456
LQPK + PE ++ V+ SD + + Y + IPSL+E +E++AD+AS+ + +
Sbjct: 1322 LQPKFAVVPERLKSVVT-SDCDT-KILFYVHRAPLKIPSLEEELNMELSADLASRIKPKQ 1379
Query: 457 LKQ-KKLNITRLKGRLFVNHGKHQLLPENEPGGSSQTR-PFLHWGSPDPENLLAELSKMG 514
+ + RL + + G L P S + P G+PD + LL L + G
Sbjct: 1380 TRSGNNAALARLSAEMHFHDGNFYL---EMPRVSRMIQAPQRFCGTPDVDALLRALREKG 1436
Query: 515 INGSVERCMTDAESEDGFTVKVQD---PEKSMIEVRAAVTVISAADKNLASRIVKAMENI 571
+ V+ + AE DG V V + IE+ + T+I +D L I A+ +
Sbjct: 1437 L---VDIQQSFAEQPDGSKVPVISVTFQTSASIELNGSETIIKTSDAVLRRLIADAVISC 1493
Query: 572 LEGI 575
L+ I
Sbjct: 1494 LQII 1497
>gi|302803558|ref|XP_002983532.1| hypothetical protein SELMODRAFT_445533 [Selaginella moellendorffii]
gi|300148775|gb|EFJ15433.1| hypothetical protein SELMODRAFT_445533 [Selaginella moellendorffii]
Length = 1469
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 191/604 (31%), Positives = 319/604 (52%), Gaps = 46/604 (7%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEE-SSGPQWMKWE 61
ML LPFLTR F+AKI+ T A +G+L+M+EL+ + ++ + YGA + P++ + E
Sbjct: 881 MLALPFLTRNPDFTAKIFATYPTATVGKLLMQELVSSHRDFLKLYGASSLENHPEFTQCE 940
Query: 62 ELELLPSALRKIALGEDGSELGGGCPCIA--HVKDCISKVQTLRFGEEACYNGILIIKAF 119
+P AL+ LGE S + + V C+ ++QTLR+GEEA +G +++ +
Sbjct: 941 ----VPEALKDCLLGEHNSGILNWHKLYSAEDVLGCMERIQTLRYGEEAPIDGCVVLTPY 996
Query: 120 SSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDF--DYRAIQGSDLILYSDLSSLDST 177
SSG IGA NW+I G ++ Y+S + A+ A D ++ GS ++L S S
Sbjct: 997 SSGQGIGASNWVIKGPCSSVTYVSSCDVAAAAASCASQDLTSLDGSQVLLVSAKQPTSSV 1056
Query: 178 EDIDQSS-------------------FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSC 218
E ++ + F +N + NS+ + ++ LA + +
Sbjct: 1057 EKLEMDTEAEPRSRLTTRPWVNARVEFITSHNAKPRMANSVLSEKREPQQRSLLAQVANA 1116
Query: 219 AIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPE 278
A D++ GGSVLIP + L+L+E I+ + C+ + I+ +S A+E LA+TNT+PE
Sbjct: 1117 AADALSKGGSVLIPTSVSDTVLELIETISQEVSCAKVSGKIFYVSPSAQEFLAFTNTVPE 1176
Query: 279 WLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGP 338
WL RQEKL++G+ LF HV+L+KE K+ FP++ SP+++ + PC++ + H SLR+GP
Sbjct: 1177 WLSSSRQEKLYNGESLFGHVELLKEGKLSHFPSL-SPEVVESG--PCVILASHVSLRMGP 1233
Query: 339 TIHLLRRWSGDHNSLLVL-ENEVDAELAVLPFKPISMKVLQCSF-LSGKKLQKVQPLLKI 396
++H+L RW ++LL+L E ++D E +LPFKP+S++V S + + L+
Sbjct: 1234 SVHILNRWRQHSSNLLILTEPDIDVERFLLPFKPLSIQVKHFPLATSARSRGALSSLIDR 1293
Query: 397 LQPKLVLFPEEWRTHVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRM 456
LQPK + PE ++ V+ SD + + Y + IPSL+E +E++AD+A++ + +
Sbjct: 1294 LQPKFAVVPERLKSVVT-SDCDT-KILFYVHRAPLKIPSLEEELNMELSADLATRIKPKQ 1351
Query: 457 LKQ-KKLNITRLKGRLFVNHGKHQLLPENEPGGSSQTR-PFLHWGSPDPENLLAELSKMG 514
+ + RL + G L P S + P G+PD + LL L + G
Sbjct: 1352 TRTGNNAALARLSAEMHFYDGNFYL---EMPRVSRMIQTPQRFCGTPDVDALLRALREKG 1408
Query: 515 INGSVERCMTDAESEDGFTVKVQD---PEKSMIEVRAAVTVISAADKNLASRIVKAMENI 571
+ V+ + AE DG V V + IE+ + T+I +D L I A+ +
Sbjct: 1409 L---VDIQQSFAEQPDGSKVPVISVTFQTSASIELNGSETIIKTSDPVLRRLIADAVISC 1465
Query: 572 LEGI 575
L+ I
Sbjct: 1466 LQII 1469
>gi|6041848|gb|AAF02157.1|AC009853_17 hypothetical protein [Arabidopsis thaliana]
Length = 620
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 122/245 (49%), Positives = 171/245 (69%), Gaps = 7/245 (2%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
MG+LGLPFLT+ GF AKIY+TE A+IGQLMME+++ M+ E+R F+G + SS P W+K
Sbjct: 111 MGLLGLPFLTQNPGFFAKIYMTEVTAKIGQLMMEDIVSMHKEFRCFHGPDNSSFPGWIKN 170
Query: 61 EELELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKA 118
+ E +P+ L+K+ GE G +LG + ++ C+ KVQ ++F EE CYNG LIIKA
Sbjct: 171 LDSEQVPALLKKVVFGESGDDLGSWMRLYSLDDIESCMKKVQGVKFAEEVCYNGTLIIKA 230
Query: 119 FSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTE 178
SSGLDIGACNW+I+G G+++Y+S S F S HA FD+ ++ +D+++YSD SSL S E
Sbjct: 231 LSSGLDIGACNWLINGPNGSLSYVSDSIFVSHHARSFDFHGLKETDVLIYSDFSSLQSAE 290
Query: 179 DIDQSSFS-DDNNNW----EELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPI 233
+ S D +NN+ + +SL N ++S+EEMEKLAF+CSCA +S AGGS LI I
Sbjct: 291 VTEDGCISPDSDNNYISTISDNKDSLLNTEDSLEEMEKLAFVCSCAAESADAGGSTLITI 350
Query: 234 NRVGV 238
R+G+
Sbjct: 351 TRIGI 355
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/227 (41%), Positives = 145/227 (63%), Gaps = 3/227 (1%)
Query: 351 NSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRT 410
NS L L+ + + L +LPF+PI+MK+LQCSFLSG +LQK+ L+ +LQPK+ L P+
Sbjct: 395 NSSLALDG-ISSGLGLLPFRPIAMKILQCSFLSGIRLQKLPTLVSVLQPKIFLVPDAVNQ 453
Query: 411 HVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKK-LNITRLKG 469
+S + + + S+ +Y EN+T+H+P + ++ +EI D+ASK WR L+Q++ I RLKG
Sbjct: 454 RISLAAIKTISILNYFENKTLHVPRIVDNPSVEITTDLASKLSWRKLRQRESFGIARLKG 513
Query: 470 RLFVNHGKHQLLPENEPGGSS-QTRPFLHWGSPDPENLLAELSKMGINGSVERCMTDAES 528
L + GKH+L+ E SS + RP HWGS PE LL L KMGI GS+E+ D S
Sbjct: 514 GLLMEDGKHRLVSGLEQEESSGKARPLRHWGSVAPELLLDALLKMGIKGSIEQSTGDNGS 573
Query: 529 EDGFTVKVQDPEKSMIEVRAAVTVISAADKNLASRIVKAMENILEGI 575
ED + +++P +IE T I D+N+ S++ +A++ +L+GI
Sbjct: 574 EDKSIIHIENPNSGLIEFSEMGTAIITGDENVVSQVFQAIDGVLDGI 620
>gi|224129960|ref|XP_002328846.1| predicted protein [Populus trichocarpa]
gi|222839144|gb|EEE77495.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 118/213 (55%), Positives = 159/213 (74%), Gaps = 1/213 (0%)
Query: 364 LAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTSFSVS 423
+A+LPFKP++MKVLQCSFLSG +LQK QPLL++L+PK VLFPE+ R + FS SFSV
Sbjct: 1 MALLPFKPMAMKVLQCSFLSGIRLQKTQPLLEMLRPKEVLFPEDLREQIKFSGSHSFSVF 60
Query: 424 HYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQLLPE 483
+Y+ENET+ +P K S +LEIA+++A++F WR L ++ITRL+G+LF++HGKHQ+L
Sbjct: 61 YYAENETLGVPRSKGSVDLEIASNLATQFSWRKLDHDDVDITRLEGQLFIDHGKHQVLSG 120
Query: 484 NEPGG-SSQTRPFLHWGSPDPENLLAELSKMGINGSVERCMTDAESEDGFTVKVQDPEKS 542
N+ +S+ +P LHWG PD E LL LSKMG+ GSVERCM+DAES V + +P K+
Sbjct: 121 NKVSEMASRKKPLLHWGVPDVEKLLTVLSKMGVKGSVERCMSDAESGSDEIVHIHEPSKA 180
Query: 543 MIEVRAAVTVISAADKNLASRIVKAMENILEGI 575
+IEVRA TVISA D+ LAS I +A+ + GI
Sbjct: 181 LIEVRATRTVISARDEQLASLIFEAIGTLTGGI 213
>gi|414879103|tpg|DAA56234.1| TPA: hypothetical protein ZEAMMB73_928273 [Zea mays]
Length = 254
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 116/245 (47%), Positives = 167/245 (68%), Gaps = 17/245 (6%)
Query: 98 KVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDY 157
KVQ++++GEE C+NGI ++KA SSGL++G W I + +I Y+ S F S HA+DFDY
Sbjct: 3 KVQSVKYGEEVCFNGIFMLKASSSGLELGNSTWTIQSPRASITYLPSSVFVSAHALDFDY 62
Query: 158 RAIQGSDLILYSDLSSLDSTEDIDQ-----------------SSFSDDNNNWEELMNSLS 200
+++ +D+IL+SD SSL+ T++ ++ S F DD + +E + +
Sbjct: 63 SSLKENDVILFSDFSSLNDTDEDNEKLNEHSMDETDSSLCRYSVFRDDGADADERVPFVC 122
Query: 201 NYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIY 260
N D+ EE+E+++FICSC +VK+GGSVLIPI R+GV L LLE I+ + SSLK+PI+
Sbjct: 123 NNDDITEEIERISFICSCIFGAVKSGGSVLIPIGRLGVILLLLELISEMLHSSSLKVPIF 182
Query: 261 IISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMN 320
+IS AEE+ A+TNT+PEWLCK RQEKLF+G+ LF HV+L+KE K+ +FP +HS LLM
Sbjct: 183 VISETAEEIFAFTNTLPEWLCKSRQEKLFAGEALFGHVELLKEGKLFLFPHLHSKGLLME 242
Query: 321 WQEPC 325
C
Sbjct: 243 GALYC 247
>gi|196014414|ref|XP_002117066.1| hypothetical protein TRIADDRAFT_32062 [Trichoplax adhaerens]
gi|190580288|gb|EDV20372.1| hypothetical protein TRIADDRAFT_32062 [Trichoplax adhaerens]
Length = 552
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 148/487 (30%), Positives = 247/487 (50%), Gaps = 49/487 (10%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
ML LP++T F KIY TE ++G+L+MEEL+ N ++ +S +W + +
Sbjct: 101 MLALPYITERCEFHGKIYATEPTLQMGKLLMEELVFYNERV-----SKSNSINEWKQPDI 155
Query: 63 LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSG 122
+ LPS L + G+ + I V+ C+SKVQ +R E+ G + A SSG
Sbjct: 156 IRFLPSPLNQ--FGDIAA--WKSIYTIKEVEACLSKVQAVRHLEKLDLFGAFNVTALSSG 211
Query: 123 LDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQ 182
+G+ NWI+ I+Y+S S+ S H M D A++ SD+++ + LS +
Sbjct: 212 FCLGSSNWILESPYEKISYLSCSSIFSTHPMPLDQEALKKSDIVILTGLSQVPYA----- 266
Query: 183 SSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQL 242
N ++L+ L N LAF ++K GG+VLIP G+ L
Sbjct: 267 --------NPDQLVTELCN---------NLAF-------TLKNGGNVLIPSYPTGIIYDL 302
Query: 243 LEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLI 301
LE + FM+ S L IPIY IS VA+ LA++N EWLC +Q+K++ +P F H L+
Sbjct: 303 LECLCTFMDQSGLGNIPIYFISPVADSSLAFSNIYGEWLCNTKQDKVYLPEPPFIHADLV 362
Query: 302 KEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLENEV 360
K K++ FP + + +PC+VF+ H LR+G +H + W D +S++ +E +
Sbjct: 363 KTKRLQHFPNLQD-GFGDVFSQPCVVFAGHPCLRIGDAVHFMEMWRNDEKSSVIFIEPDF 421
Query: 361 DAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVSFSD--- 416
E A+ PF+P+SMK C +V LL+ ++P+ ++ PE + R + +F
Sbjct: 422 PYEDALAPFQPLSMKAFYCPIDHRLNFNQVNKLLQDIKPQRLVLPESYVRPYDAFGRRIE 481
Query: 417 --VTSFSVSH-YSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFV 473
V + +H Y++ + + +P ++ ++ I+ ++AS+ + L I ++G L V
Sbjct: 482 HYVNASVPTHPYNKGDVLALPLKRQYEKVVISNELASQLHLSEVNNSTL-IASVRGSLHV 540
Query: 474 NHGKHQL 480
KH L
Sbjct: 541 CDNKHTL 547
>gi|390341842|ref|XP_783183.3| PREDICTED: integrator complex subunit 9-like [Strongylocentrotus
purpuratus]
Length = 661
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 152/503 (30%), Positives = 241/503 (47%), Gaps = 52/503 (10%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
MLGLPF+T GF IY TE +IG+ MMEEL+ EY + + SS W K +
Sbjct: 109 MLGLPFITEFTGFKGVIYATEPTIQIGRQMMEELV----EYMERVPKKHSSS-LWKKPDL 163
Query: 63 LELLPSALRKIALGEDGSELGGGCPCIAH--VKDCISKVQTLRFGEEACYNGILIIKAFS 120
L+ LP+ L+ D LG C + V C+SK+ F E+ G L + S
Sbjct: 164 LKTLPAPLK------DVKWLGCWKKCYSKHDVNACLSKITNAAFSEKLSLFGALTLVPLS 217
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+CNWIIS A ++Y+S S+F + H+M + ++ SD+I+ + L+ +
Sbjct: 218 SGFCLGSCNWIISSAYEKVSYVSASSFLTTHSMPINQDPLKNSDVIVLTGLTQTPA---- 273
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
N D + E CS ++K+GG+VL+P GV
Sbjct: 274 -------------------HNPDSMLGEF------CSTLTMTIKSGGNVLVPCYPSGVIY 308
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
L E +A +ME L + P+Y IS VA+ LA++ + EWLC +Q K++ +P F H +
Sbjct: 309 DLFECLAGYMESVGLMQTPLYFISPVADSSLAFSQILSEWLCGVKQSKVYLPEPPFPHAE 368
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 358
LIK ++ FP+ H + ++ PC+VF+ H SLR+G +H + W + +N++L +E
Sbjct: 369 LIKNGRLKHFPSRHG-EFSNQFKTPCVVFTGHPSLRMGDAVHFMEMWGKNSNNTVLFIEP 427
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVT 418
A+ P++P++MK C + PL +L + PE
Sbjct: 428 SFPYLDALAPYQPLAMKA--CYYFECIMSLLDSPLQVVLPESYLNPPESHPLRTDLVVEV 485
Query: 419 SFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNHGKH 478
+ + YS ++ I + + ++EI ++AS L Q + ++ + G L V+ K
Sbjct: 486 DPAATPYSRDDVISLLVKRRYEKVEITPEVASSLAPVEL-QPGVLVSTVTGHLNVHDNKF 544
Query: 479 QLLPENEPGGSSQTRPFLHWGSP 501
L E P S Q P L G P
Sbjct: 545 IL--EELP--SPQANPLLPTGQP 563
>gi|156378291|ref|XP_001631077.1| predicted protein [Nematostella vectensis]
gi|193806037|sp|A7SBF0.1|INT9_NEMVE RecName: Full=Integrator complex subunit 9 homolog
gi|156218110|gb|EDO39014.1| predicted protein [Nematostella vectensis]
Length = 660
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 153/590 (25%), Positives = 277/590 (46%), Gaps = 71/590 (12%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
ML LPF+T GF+ KIY TE +IG+ +M EL+ + +G W
Sbjct: 111 MLALPFITEYSGFNGKIYATEPTIQIGRDLMLELVTFAERV-----PKRRNGNMWKNDNV 165
Query: 63 LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSG 122
+ LP+ L ++A + L VK CISK+Q + + E+ GIL + A SSG
Sbjct: 166 IRCLPAPLNELANVKSWRVLYSK----HDVKACISKIQAVSYSEKLDLCGILQLSAHSSG 221
Query: 123 LDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQ 182
+G+ NW++ I+Y+S S+ + H + + ++ SD+++ + ++
Sbjct: 222 FCLGSSNWMLESEYEKISYLSPSSSFTTHPLPLNQTVLKNSDVLIITGVTEA-------- 273
Query: 183 SSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQL 242
+ N D + E C+ +++AGG+VL+P GV L
Sbjct: 274 ---------------PIDNPDAMLGEF------CTHLASTLRAGGNVLVPCYPSGVLYDL 312
Query: 243 LEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLI 301
E + +++ + L +PIY IS VA+ LAY+N EWLC+ +Q K++ +P F H +L+
Sbjct: 313 FECLYTYLDNAKLGMVPIYFISPVADSSLAYSNIYGEWLCQSKQTKVYLPEPPFPHAELL 372
Query: 302 KEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWS-GDHNSLLVLENEV 360
KE ++ VF +H+ +++ PC+VF+ H SLR G +H + W +N+++ E +
Sbjct: 373 KEARLKVFSNLHN-GFSSSFKTPCVVFTGHPSLRYGDAVHFMEIWGKSGNNTVIFTEPDF 431
Query: 361 DAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW---------RTH 411
A+ P++P++MK C + LLK LQP+ ++ PE + RT
Sbjct: 432 PYLEALAPYQPLAMKTCYCPIDPRLNFAQANKLLKELQPRHLVMPESYSRPPVIHPHRTD 491
Query: 412 VSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRL 471
++ D S++ ++ + +P + ++ IA +++S + ++ + + L G L
Sbjct: 492 LTIED-PGCSLTTFNHLDVAALPISRSFEKVVIANELSSCLHPQHVR-PGVAVATLTGTL 549
Query: 472 FVNHGKHQLLP---------ENEPGGSSQTRPFLH---WGSPDPENLLAELSKMGINGSV 519
K+ L P +E G SS + L WG+ ++ + L K GI
Sbjct: 550 VTKDNKYTLQPLEFLVEPKAGSEGGDSSTNKGQLSRHLWGTVQLDDFVRSLKKRGITD-- 607
Query: 520 ERCMTDAESEDG-FTVKVQDPEKSMIEVRAAVTVISAADKNLASRIVKAM 568
+ ES G T+ + + + ++ R + +I+ ++ L RI A+
Sbjct: 608 ----VNVESSGGEHTIHLPNDDAMILLDRGSTHIITHGNEELRIRIRDAL 653
>gi|260788554|ref|XP_002589314.1| hypothetical protein BRAFLDRAFT_217919 [Branchiostoma floridae]
gi|229274491|gb|EEN45325.1| hypothetical protein BRAFLDRAFT_217919 [Branchiostoma floridae]
Length = 665
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 157/581 (27%), Positives = 269/581 (46%), Gaps = 82/581 (14%)
Query: 3 MLGLPFLTRMEGFSAK--IYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
+L LP++T GF+ IY TE A++G+ +MEEL+ + A KW
Sbjct: 114 ILALPYITEYTGFNGTGMIYATEPTAQMGRQLMEELVQHTERVPKTCTAS--------KW 165
Query: 61 EE---LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIK 117
+E ++LP+ LR G + + L C + V +SKVQ + + ++ G L I
Sbjct: 166 KEPGVFKMLPAQLRD---GLNPASLRD-CYGLHDVNSALSKVQLVGYAQKLDVFGALQIM 221
Query: 118 AFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDST 177
SSG IG+CNW+I I+YIS S+ + H D +Q +D+++ + L+
Sbjct: 222 PLSSGYCIGSCNWLIQSHYEKISYISSSSVLTTHPQPMDQGPLQNTDVLILAGLTQ---- 277
Query: 178 EDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVG 237
+ +N D + E CS +VK GG+VL+P G
Sbjct: 278 -------------------SPTANPDSMLSEF------CSHLAVTVKNGGNVLVPCYPSG 312
Query: 238 VFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFA 296
V L E +A+F++ S L ++P+Y +S +A+ LAY+N EWLC+ +Q K++ + F
Sbjct: 313 VVYDLFECLAVFLDNSGLMQLPVYFVSPMADSSLAYSNIFAEWLCQSKQSKVYLPEAPFV 372
Query: 297 HVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRW-SGDHNSLLV 355
H +L ++ VFP+VH ++ PC+VF+ H +LR G +H + W N+++
Sbjct: 373 HEELKTISRLKVFPSVHG-DFSSEFKTPCVVFAGHPTLRFGDGVHFMEIWGQSKANTVIF 431
Query: 356 LENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFS 415
+E ++ A+ PF+P++MK + C + Q+ ++ L+P V+ PE + T
Sbjct: 432 VEPDIPYLDALAPFQPLAMKAVHCPIDTRLSFQQANKIISDLKPLHVVLPETYITPPPSL 491
Query: 416 DVTSFSV-------SHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLK 468
S V + Y E + +P + ++EI ++AS ++Q + + +
Sbjct: 492 PQRSDLVLEADPPPTTYQRGEVLSLPIKRMYEKIEITPELASALVPSEIRQ-GVAVASVT 550
Query: 469 GRLFVNHGKH--QLLPENEPGGSSQTR----------PFLH-WGSPDPENLLAELSKMGI 515
G L + Q +P+ G Q R P H WG+ E + +L K G+
Sbjct: 551 GVLEAKDNNYVLQSVPKQPTAGPGQKRKREDNADFAPPKPHVWGAVQVEQFVQDLEKGGV 610
Query: 516 NGSVERCMTDAESED---GFTVKVQDPEKSMIEVRAAVTVI 553
TD + ED G + +Q E ++I++ T I
Sbjct: 611 --------TDVKVEDTPSGHIIHLQS-EDTLIQIEDGSTHI 642
>gi|321469645|gb|EFX80624.1| hypothetical protein DAPPUDRAFT_303892 [Daphnia pulex]
Length = 650
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 149/579 (25%), Positives = 266/579 (45%), Gaps = 73/579 (12%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
ML LPF+T GF ++Y TE +IG+L MEEL+ Y + +W++
Sbjct: 109 MLALPFITEETGFKGRVYATEPTLQIGRLYMEELVN--------YLERTPKNQRANRWKQ 160
Query: 63 -LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS 121
L+ LP L D ++ + ++KV+ + F E+ G L + A SS
Sbjct: 161 VLQSLPPPLSGALRPNDWKKVYS----TKAINAALAKVRMVGFNEKIDICGALTVMAVSS 216
Query: 122 GLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDID 181
G +G+CNWII IAY+S S+ + H D A++ +DL++ + L+
Sbjct: 217 GYSLGSCNWIIHSGYEKIAYVSASSTLTTHPRPMDQVALRNADLLILTALTQ-------- 268
Query: 182 QSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQ 241
++N D + E C ++++GGS L+P + G+
Sbjct: 269 ---------------TPVANPDSMLGEF------CMAVASTLRSGGSCLVPCHPSGLLYD 307
Query: 242 LLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKL 300
L E +++ ++ L +IP++ S VAE LAY+N EWL +Q K++ + F H L
Sbjct: 308 LFECLSVHLDNIGLSQIPLFFFSPVAETSLAYSNIFAEWLSSGKQSKVYLPEEPFPHAHL 367
Query: 301 IKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHN-SLLVLENE 359
IK ++ FP++H+ +++PC+VF H SLR G +H + W N S++ +E +
Sbjct: 368 IKNGRLKHFPSLHAEGFTNEYRQPCVVFCGHPSLRFGNVVHFIELWGSHSNHSIVFVEPD 427
Query: 360 VDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW---------RT 410
A+ P++P++MK++ C + + L++ L+P +L P+ + R+
Sbjct: 428 FPYLEALAPYQPLTMKIVHCPIDTSLSFTQANKLIRDLKPGNLLVPDVYLHPPVSAPLRS 487
Query: 411 HVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
+ ++ ++ S + + +P ++ ++ + +AS+ + K L+ + L G+
Sbjct: 488 DLVIQELDPPALGMKSY-QVLQLPIKRKQEKVHLDPALASRLEPIQFK-TGLSASTLTGK 545
Query: 471 LFVNHGKHQLLPENEPGG------SSQTRPFLHWGSPDPENLLAELSKMGINGSVERCMT 524
L K L NE G S + P WGS D LL LS+ G +
Sbjct: 546 LDARDNKFTLKVLNEEEGGTLYSASERMLPRHPWGSVDTTQLLHLLSQHG--------LL 597
Query: 525 DAESED---GFTVKVQDPEKSMIEVRAAVTVISAADKNL 560
DA ED G + + E ++I++ + T + D+ L
Sbjct: 598 DARVEDTPRGVVIHLPR-EDTVIQLEGSNTHVYCHDEAL 635
>gi|395842349|ref|XP_003793980.1| PREDICTED: integrator complex subunit 9 [Otolemur garnettii]
Length = 658
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 148/557 (26%), Positives = 261/557 (46%), Gaps = 62/557 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GFS +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFSGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKSKDI 161
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E C + V +SK++ + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEASTWRRCYTMQEVNAALSKIRLVGYSQKIELFGAVQVTPLS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 271
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 241 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +M+ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYMDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 366
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC++F+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFRQPCVLFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVSFSDV 417
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ + + S
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 485
Query: 418 TSFSV------SHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRL 471
T + + Y E + +P + ++EI ++A +K +++ + L
Sbjct: 486 TDLVIDCQPPATSYRRAEVLTLPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAVL 544
Query: 472 FVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDAE 527
+ KH L P P SS+ R + PD ++ K ++GS VE+ + E
Sbjct: 545 YTKDNKHVLQPPPRPAQPTSSKKRKRVSDDVPD-----CKVLKPLLSGSIPVEQFVQTLE 599
Query: 528 SEDGFTVKVQDPEKSMI 544
+KV+D K I
Sbjct: 600 KHGFSDIKVEDTAKGHI 616
>gi|427798153|gb|JAA64528.1| Putative cleavage and polyadenylation specificity factor cpsf
subunit, partial [Rhipicephalus pulchellus]
Length = 644
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 147/532 (27%), Positives = 250/532 (46%), Gaps = 61/532 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQW-MKWE 61
ML LP++T GF +Y+TE IG+ MEEL+ E + P+ +W+
Sbjct: 139 MLALPYVTERTGFKGTVYMTEPTLLIGRQFMEELVTY---------IERTPKPRTATRWK 189
Query: 62 ELELLPSALRKIALGEDGS--ELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAF 119
+ L L + LG+ S +L + V +SKV+ + F E+ G++ + A
Sbjct: 190 QQALKFQQLPSLDLGKPRSWRQLYS----MQDVNSSLSKVKVVGFAEKVDVFGMVQVSAV 245
Query: 120 SSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTED 179
SSG +G+CNWI++ I Y+SGS+ + H ++ ++ +D ++ L+SL T
Sbjct: 246 SSGYCLGSCNWIVTADHEKIVYMSGSSTLTTHPKPIEHGPLRNADALI---LTSLTQT-- 300
Query: 180 IDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVF 239
L+N D + E C +VK GG+VLIP GV
Sbjct: 301 ------------------PLANPDTMLGEF------CITVAMTVKMGGNVLIPCYPSGVT 336
Query: 240 LQLLEQIAIFMECSS-LKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHV 298
L E ++ +E + + +P+Y +S VAE LAY++ + EWL +Q K++ + F H
Sbjct: 337 YDLFECLSGHLETTGQVNVPMYFLSPVAENSLAYSSILAEWLSSAKQAKVYIPEEPFPHA 396
Query: 299 KLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL-E 357
+L++ ++ F ++ + ++ PCIVF+ H SLR G +H + W N++++ E
Sbjct: 397 QLVRGGRLKPFSSIKAEGFTADFHTPCIVFAGHPSLRFGDVVHFMELWGPSPNNVVIFTE 456
Query: 358 NEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSF--- 414
+ + A+ PF+P++MK L + + L++ L+P ++ P ++
Sbjct: 457 PDFNLAEAIAPFQPMAMKALCFPIDTSLSFVQANKLIRDLKPTNLVLPLQYTLPPPLQPH 516
Query: 415 -SDVT---SFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
SD+ V Y+ +HIP + +E+ A++A +K L I L G
Sbjct: 517 RSDLVIEAECEVQTYTRGSIVHIPVQRRYQRIEMTAELAESVVPVEVKC-GLGIATLTGA 575
Query: 471 LFVNHGKHQLLP-ENEPGGS----SQTRPFLH-WGSPDPENLLAELSKMGIN 516
L VN+ + L P + EP GS QT P ++ WGS D +L K G
Sbjct: 576 LHVNNNRCMLKPLQKEPSGSKKWNGQTPPKIYTWGSLDVTEFARKLDKAGFT 627
>gi|427789017|gb|JAA59960.1| Putative cleavage and polyadenylation specificity factor cpsf
subunit [Rhipicephalus pulchellus]
Length = 650
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 147/532 (27%), Positives = 250/532 (46%), Gaps = 61/532 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQW-MKWE 61
ML LP++T GF +Y+TE IG+ MEEL+ E + P+ +W+
Sbjct: 108 MLALPYVTERTGFKGTVYMTEPTLLIGRQFMEELVTY---------IERTPKPRTATRWK 158
Query: 62 ELELLPSALRKIALGEDGS--ELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAF 119
+ L L + LG+ S +L + V +SKV+ + F E+ G++ + A
Sbjct: 159 QQALKFQQLPSLDLGKPRSWRQLYS----MQDVNSSLSKVKVVGFAEKVDVFGMVQVSAV 214
Query: 120 SSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTED 179
SSG +G+CNWI++ I Y+SGS+ + H ++ ++ +D ++ L+SL T
Sbjct: 215 SSGYCLGSCNWIVTADHEKIVYMSGSSTLTTHPKPIEHGPLRNADALI---LTSLTQT-- 269
Query: 180 IDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVF 239
L+N D + E C +VK GG+VLIP GV
Sbjct: 270 ------------------PLANPDTMLGEF------CITVAMTVKMGGNVLIPCYPSGVT 305
Query: 240 LQLLEQIAIFMECSS-LKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHV 298
L E ++ +E + + +P+Y +S VAE LAY++ + EWL +Q K++ + F H
Sbjct: 306 YDLFECLSGHLETTGQVNVPMYFLSPVAENSLAYSSILAEWLSSAKQAKVYIPEEPFPHA 365
Query: 299 KLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL-E 357
+L++ ++ F ++ + ++ PCIVF+ H SLR G +H + W N++++ E
Sbjct: 366 QLVRGGRLKPFSSIKAEGFTADFHTPCIVFAGHPSLRFGDVVHFMELWGPSPNNVVIFTE 425
Query: 358 NEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSF--- 414
+ + A+ PF+P++MK L + + L++ L+P ++ P ++
Sbjct: 426 PDFNLAEAIAPFQPMAMKALCFPIDTSLSFVQANKLIRDLKPTNLVLPLQYTLPPPLQPH 485
Query: 415 -SDVT---SFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
SD+ V Y+ +HIP + +E+ A++A +K L I L G
Sbjct: 486 RSDLVIEAECEVQTYTRGSIVHIPVQRRYQRIEMTAELAESVVPVEVK-CGLGIATLTGA 544
Query: 471 LFVNHGKHQLLP-ENEPGGS----SQTRPFLH-WGSPDPENLLAELSKMGIN 516
L VN+ + L P + EP GS QT P ++ WGS D +L K G
Sbjct: 545 LHVNNNRCMLKPLQKEPSGSKKWNGQTPPKIYTWGSLDVTEFARKLDKAGFT 596
>gi|405951103|gb|EKC19045.1| Integrator complex subunit 9 [Crassostrea gigas]
Length = 1785
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 145/564 (25%), Positives = 256/564 (45%), Gaps = 66/564 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
ML LP++T GF +Y TE +IG+ MEEL+ Y + KW+
Sbjct: 119 MLALPYVTEYSGFKGTVYCTEPTQQIGRQYMEELVT--------YVERNPRNKKCSKWKS 170
Query: 63 ---LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAF 119
L LP+ LR+ E C ++ C+S+VQT+ + E+ G LII A
Sbjct: 171 DAILSSLPTFLREAIRPTAWRE----CYTKHDIQACLSRVQTVGYNEKRNIYGALIITAC 226
Query: 120 SSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTED 179
SSG IG+CNW I I YISG++ + H D ++ SDLI+ S ++
Sbjct: 227 SSGYSIGSCNWTIKSPYQKICYISGTSTLTTHPKPMDTEPLRQSDLIIVSSMTKTPGY-- 284
Query: 180 IDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVF 239
N D+ + E C + ++K GG+VL+P G+
Sbjct: 285 ---------------------NPDQMIGE------FCMNTVVTIKNGGNVLVPCYPSGMI 317
Query: 240 LQLLEQIAIFME-CSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHV 298
L E ++ ++ C +P+Y +S V++ LAY+N EWL +Q +++ +P F H
Sbjct: 318 FDLFECLSSHLDSCGLTTVPLYFLSPVSDSSLAYSNIYAEWLSGSKQSRVYLPEPPFPHA 377
Query: 299 KLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRW-SGDHNSLLVLE 357
+L+ ++ + +H L +++ PCIVF+ H SLR+G +H + W N++L E
Sbjct: 378 ELVSIGRLRQYLNIHD-GLQNDFKSPCIVFAGHPSLRMGDVVHFIELWGKSTSNTILFTE 436
Query: 358 NEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVSFSD 416
+ A+ PF+P+ MKV C +G + L++ L+P ++ E + + + S
Sbjct: 437 PDFPYLEALAPFQPLQMKVCYCPIDTGLSFSQANKLMRDLKPGHLVVAESYVQPPSNLSH 496
Query: 417 VTSFSVSH------YSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
T V + Y E + +P ++ +EI ++A +K + ++ +
Sbjct: 497 KTDMVVDYDPPPLTYKRGEILTLPIKRQFETVEITPNLAKNVSPVEVKPGCM-VSMVTAA 555
Query: 471 LFVNHGKH--QLLPENEPGGSSQT--------RPFLHWGSPDPENLLAELSKMGINGSVE 520
L + K+ +LLP+ G + + ++ WGS + ++ + L++ GI
Sbjct: 556 LNIKDNKYTLELLPDGHLSGKKRRADGSLIREKSYI-WGSLNIQSFVDALTRQGITDIKV 614
Query: 521 RCMTDAESEDGFTVKVQDPEKSMI 544
D D ++K++ E S++
Sbjct: 615 EDTEDGSIIDLCSIKMEKLEASVV 638
>gi|75076201|sp|Q4R5Z4.1|INT9_MACFA RecName: Full=Integrator complex subunit 9; Short=Int9
gi|67970276|dbj|BAE01481.1| unnamed protein product [Macaca fascicularis]
Length = 637
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 149/558 (26%), Positives = 261/558 (46%), Gaps = 64/558 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 86 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 140
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + F ++ G + + S
Sbjct: 141 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGFSQKIELFGAVQVTPLS 194
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 195 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 250
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 251 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 285
Query: 241 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 286 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 345
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 346 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 404
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 412
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 405 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 464
Query: 413 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 465 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 522
Query: 471 LFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDA 526
L KH L P P S + R + PD ++ K ++GS VE+ +
Sbjct: 523 LHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD-----CKVLKPLLSGSIPVEQFVQTL 577
Query: 527 ESEDGFTVKVQDPEKSMI 544
E +KV+D K I
Sbjct: 578 EKHGFSDIKVEDTAKGHI 595
>gi|335300989|ref|XP_001929033.3| PREDICTED: integrator complex subunit 9 [Sus scrofa]
Length = 667
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 161/608 (26%), Positives = 279/608 (45%), Gaps = 89/608 (14%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 1 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 55
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 56 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQMVGYSQKIELFGAVQVTPLS 109
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 110 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 165
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 166 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 200
Query: 241 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 201 DLLECLYQYIDSAGLSSIPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 260
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 261 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 319
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 412
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 320 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 379
Query: 413 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 380 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 437
Query: 471 LFVNHGKHQLLPENEP----GGSSQTR------------PFLHWGSPDPENLLAELSKMG 514
L KH L P P GG + R P L GS E + L K G
Sbjct: 438 LHTKDNKHVLQPPPRPAQPVGGKKRKRASEEVPDCKVVKPLLS-GSIPVEQFVQTLEKHG 496
Query: 515 INGSVERCMTDAESED---GFTVKVQDPEKSMIEVRAAVT-VISAADKNLASR----IVK 566
+D + ED G V +Q+ E ++I++ T +I D+ L R ++K
Sbjct: 497 --------FSDIKVEDTAKGHIVLLQEAE-TLIQIEEDSTHIICDNDEMLRVRLRDLVLK 547
Query: 567 AMENILEG 574
++ +L G
Sbjct: 548 FLKKVLRG 555
>gi|426220575|ref|XP_004004490.1| PREDICTED: integrator complex subunit 9 [Ovis aries]
Length = 658
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 137/507 (27%), Positives = 239/507 (47%), Gaps = 59/507 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 271
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDSMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 241 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSSIPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 366
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 412
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 485
Query: 413 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 486 MDLMVDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 543
Query: 471 LFVNHGKHQLLPENEP----GGSSQTR 493
L KH L P P GG + R
Sbjct: 544 LHTKDNKHVLQPPPRPAQPTGGKKRKR 570
>gi|440895499|gb|ELR47667.1| Integrator complex subunit 9, partial [Bos grunniens mutus]
Length = 655
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 137/507 (27%), Positives = 239/507 (47%), Gaps = 59/507 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 104 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 158
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 159 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 212
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 213 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 268
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 269 -------------------ANPDSMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 303
Query: 241 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 304 DLLECLYQYIDSAGLSSIPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 363
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 364 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 422
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 412
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 423 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 482
Query: 413 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 483 MDLMVDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 540
Query: 471 LFVNHGKHQLLPENEP----GGSSQTR 493
L KH L P P GG + R
Sbjct: 541 LHTKDNKHVLQPPPRPAQPTGGKKRKR 567
>gi|431918247|gb|ELK17474.1| Integrator complex subunit 9, partial [Pteropus alecto]
Length = 655
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 158/594 (26%), Positives = 271/594 (45%), Gaps = 85/594 (14%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 104 MMALPYITEHTGFTGTVYATEPTIQIGRLLMEELV--NFIERV---PKAQSASMWKNKDI 158
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 159 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 212
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 213 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 268
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 269 -------------------ANPDGMVGEF------CSSLALTVRNGGNVLVPCYPSGVIY 303
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 304 DLLECLYQYIDSAGLASIPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 363
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 364 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 422
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 412
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 423 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 482
Query: 413 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
D +S Y E + +P + ++EI ++A +K +++ +
Sbjct: 483 MDLMIDCQPPPMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 540
Query: 471 LFVNHGKHQLLPENEP----GGSSQTR------------PFLHWGSPDPENLLAELSKMG 514
L KH L P P GG + R P L GS E + L K G
Sbjct: 541 LHTKDNKHVLQPPPRPAQPTGGKKRKRANEDIPDCKVLKPLLS-GSIPVEQFVQTLEKHG 599
Query: 515 INGSVERCMTDAESED---GFTVKVQDPEKSMIEVRAAVT-VISAADKNLASRI 564
+D + ED G V +Q+ E ++I++ T +I D+ L R+
Sbjct: 600 --------FSDIKVEDTAKGHIVLLQEAE-TLIQIEEDSTHIICDNDETLRVRL 644
>gi|395739541|ref|XP_003777277.1| PREDICTED: integrator complex subunit 9 [Pongo abelii]
Length = 634
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 148/558 (26%), Positives = 261/558 (46%), Gaps = 64/558 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 83 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 137
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 138 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 191
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 192 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 247
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 248 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 282
Query: 241 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 283 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 342
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 343 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 401
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 412
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 402 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 461
Query: 413 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 462 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 519
Query: 471 LFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDA 526
L KH L P P S + R + PD ++ K ++GS VE+ +
Sbjct: 520 LHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD-----CKVLKPLLSGSIPVEQFVQTL 574
Query: 527 ESEDGFTVKVQDPEKSMI 544
E +KV+D K I
Sbjct: 575 EKHGFSDIKVEDTAKGHI 592
>gi|297682599|ref|XP_002819004.1| PREDICTED: integrator complex subunit 9 isoform 3 [Pongo abelii]
gi|332825770|ref|XP_003311697.1| PREDICTED: integrator complex subunit 9 [Pan troglodytes]
gi|410041655|ref|XP_003311698.2| PREDICTED: integrator complex subunit 9 [Pan troglodytes]
Length = 552
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 148/558 (26%), Positives = 261/558 (46%), Gaps = 64/558 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 1 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 55
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 56 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 109
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 110 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 165
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 166 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 200
Query: 241 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 201 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 260
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 261 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 319
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 412
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 320 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 379
Query: 413 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 380 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 437
Query: 471 LFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDA 526
L KH L P P S + R + PD ++ K ++GS VE+ +
Sbjct: 438 LHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD-----CKVLKPLLSGSIPVEQFVQTL 492
Query: 527 ESEDGFTVKVQDPEKSMI 544
E +KV+D K I
Sbjct: 493 EKHGFSDIKVEDTAKGHI 510
>gi|289191297|ref|NP_001166033.1| integrator complex subunit 9 isoform 3 [Homo sapiens]
gi|332825766|ref|XP_003311696.1| PREDICTED: integrator complex subunit 9 [Pan troglodytes]
gi|221042238|dbj|BAH12796.1| unnamed protein product [Homo sapiens]
Length = 634
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 148/558 (26%), Positives = 261/558 (46%), Gaps = 64/558 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 83 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 137
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 138 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 191
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 192 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 247
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 248 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 282
Query: 241 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 283 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 342
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 343 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 401
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 412
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 402 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 461
Query: 413 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 462 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 519
Query: 471 LFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDA 526
L KH L P P S + R + PD ++ K ++GS VE+ +
Sbjct: 520 LHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD-----CKVLKPLLSGSIPVEQFVQTL 574
Query: 527 ESEDGFTVKVQDPEKSMI 544
E +KV+D K I
Sbjct: 575 EKHGFSDIKVEDTAKGHI 592
>gi|221045058|dbj|BAH14206.1| unnamed protein product [Homo sapiens]
Length = 552
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 148/558 (26%), Positives = 261/558 (46%), Gaps = 64/558 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 1 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 55
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 56 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 109
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 110 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 165
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 166 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 200
Query: 241 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 201 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 260
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 261 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 319
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 412
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 320 DFSYLEALAPYQPLAMKCIYCPIGTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 379
Query: 413 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 380 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 437
Query: 471 LFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDA 526
L KH L P P S + R + PD ++ K ++GS VE+ +
Sbjct: 438 LHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD-----CKVLKPLLSGSIPVEQFVQTL 492
Query: 527 ESEDGFTVKVQDPEKSMI 544
E +KV+D K I
Sbjct: 493 EKHGFSDIKVEDTAKGHI 510
>gi|348587992|ref|XP_003479751.1| PREDICTED: integrator complex subunit 9-like [Cavia porcellus]
Length = 659
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 148/557 (26%), Positives = 258/557 (46%), Gaps = 62/557 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 108 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 162
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 163 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 216
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 217 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 272
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 273 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 307
Query: 241 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L +P Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 308 DLLECLYQYIDSAGLSSVPFYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 367
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 368 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 426
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVSFSDV 417
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ + + S
Sbjct: 427 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 486
Query: 418 TSFSVS------HYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRL 471
V Y E + +P + ++EI ++A +K +++ + L
Sbjct: 487 MDLMVDCQPPPMAYRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAVL 545
Query: 472 FVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDAE 527
KH L P P SS+ R + PD ++ K ++GS VE+ + E
Sbjct: 546 HTKDNKHVLQPPPRPAQPTSSKKRKRVSEDVPD-----CKVLKPLLSGSIPVEQFVQTLE 600
Query: 528 SEDGFTVKVQDPEKSMI 544
+KV+D K I
Sbjct: 601 KHGFSDIKVEDTAKGHI 617
>gi|297682597|ref|XP_002819003.1| PREDICTED: integrator complex subunit 9 isoform 2 [Pongo abelii]
gi|383419915|gb|AFH33171.1| integrator complex subunit 9 isoform 2 [Macaca mulatta]
Length = 637
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 148/558 (26%), Positives = 261/558 (46%), Gaps = 64/558 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 86 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 140
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 141 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 194
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 195 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 250
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 251 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 285
Query: 241 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 286 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 345
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 346 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 404
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 412
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 405 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 464
Query: 413 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 465 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 522
Query: 471 LFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDA 526
L KH L P P S + R + PD ++ K ++GS VE+ +
Sbjct: 523 LHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD-----CKVLKPLLSGSIPVEQFVQTL 577
Query: 527 ESEDGFTVKVQDPEKSMI 544
E +KV+D K I
Sbjct: 578 EKHGFSDIKVEDTAKGHI 595
>gi|223555970|ref|NP_001138631.1| integrator complex subunit 9 isoform 2 [Homo sapiens]
gi|114619533|ref|XP_001166880.1| PREDICTED: integrator complex subunit 9 isoform 3 [Pan troglodytes]
gi|221043268|dbj|BAH13311.1| unnamed protein product [Homo sapiens]
Length = 637
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 148/558 (26%), Positives = 261/558 (46%), Gaps = 64/558 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 86 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 140
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 141 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 194
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 195 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 250
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 251 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 285
Query: 241 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 286 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 345
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 346 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 404
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 412
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 405 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 464
Query: 413 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 465 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 522
Query: 471 LFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDA 526
L KH L P P S + R + PD ++ K ++GS VE+ +
Sbjct: 523 LHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD-----CKVLKPLLSGSIPVEQFVQTL 577
Query: 527 ESEDGFTVKVQDPEKSMI 544
E +KV+D K I
Sbjct: 578 EKHGFSDIKVEDTAKGHI 595
>gi|355697836|gb|EHH28384.1| Integrator complex subunit 9, partial [Macaca mulatta]
gi|355779609|gb|EHH64085.1| Integrator complex subunit 9, partial [Macaca fascicularis]
Length = 655
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 148/558 (26%), Positives = 261/558 (46%), Gaps = 64/558 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 104 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 158
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 159 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 212
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 213 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 268
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 269 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 303
Query: 241 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 304 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 363
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 364 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 422
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 412
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 423 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 482
Query: 413 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 483 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 540
Query: 471 LFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDA 526
L KH L P P S + R + PD ++ K ++GS VE+ +
Sbjct: 541 LHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD-----CKVLKPLLSGSIPVEQFVQTL 595
Query: 527 ESEDGFTVKVQDPEKSMI 544
E +KV+D K I
Sbjct: 596 EKHGFSDIKVEDTAKGHI 613
>gi|223555968|ref|NP_060720.2| integrator complex subunit 9 isoform 1 [Homo sapiens]
gi|114619527|ref|XP_001166975.1| PREDICTED: integrator complex subunit 9 isoform 6 [Pan troglodytes]
gi|332825768|ref|XP_003311695.1| PREDICTED: integrator complex subunit 9 [Pan troglodytes]
gi|119371246|sp|Q9NV88.2|INT9_HUMAN RecName: Full=Integrator complex subunit 9; Short=Int9; AltName:
Full=Protein related to CPSF subunits of 74 kDa;
Short=RC-74
gi|19263803|gb|AAH25267.1| Integrator complex subunit 9 [Homo sapiens]
gi|119583910|gb|EAW63506.1| integrator complex subunit 9, isoform CRA_c [Homo sapiens]
gi|190689503|gb|ACE86526.1| integrator complex subunit 9 protein [synthetic construct]
gi|190690861|gb|ACE87205.1| integrator complex subunit 9 protein [synthetic construct]
gi|410207030|gb|JAA00734.1| integrator complex subunit 9 [Pan troglodytes]
gi|410251808|gb|JAA13871.1| integrator complex subunit 9 [Pan troglodytes]
gi|410290238|gb|JAA23719.1| integrator complex subunit 9 [Pan troglodytes]
gi|410339459|gb|JAA38676.1| integrator complex subunit 9 [Pan troglodytes]
Length = 658
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 148/558 (26%), Positives = 261/558 (46%), Gaps = 64/558 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 271
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 241 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 366
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 412
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 485
Query: 413 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 486 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 543
Query: 471 LFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDA 526
L KH L P P S + R + PD ++ K ++GS VE+ +
Sbjct: 544 LHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD-----CKVLKPLLSGSIPVEQFVQTL 598
Query: 527 ESEDGFTVKVQDPEKSMI 544
E +KV+D K I
Sbjct: 599 EKHGFSDIKVEDTAKGHI 616
>gi|119583909|gb|EAW63505.1| integrator complex subunit 9, isoform CRA_b [Homo sapiens]
Length = 656
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 148/558 (26%), Positives = 261/558 (46%), Gaps = 64/558 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 105 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 159
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 160 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 213
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 214 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 269
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 270 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 304
Query: 241 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 305 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 364
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 365 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 423
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 412
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 424 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 483
Query: 413 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 484 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 541
Query: 471 LFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDA 526
L KH L P P S + R + PD ++ K ++GS VE+ +
Sbjct: 542 LHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD-----CKVLKPLLSGSIPVEQFVQTL 596
Query: 527 ESEDGFTVKVQDPEKSMI 544
E +KV+D K I
Sbjct: 597 EKHGFSDIKVEDTAKGHI 614
>gi|291385827|ref|XP_002709344.1| PREDICTED: integrator complex subunit 9 [Oryctolagus cuniculus]
Length = 687
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 150/558 (26%), Positives = 259/558 (46%), Gaps = 64/558 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 136 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 190
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 191 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 244
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 245 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQTSLKNSDVLVLTGLTQIPT---- 300
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 301 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 335
Query: 241 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L +P Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 336 DLLECLYQYIDSAGLSSVPFYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 395
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 396 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 454
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 412
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 455 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 514
Query: 413 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 515 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 572
Query: 471 LFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDA 526
L KH L P P S + R + PD + L LS GS VE+ +
Sbjct: 573 LHTKDNKHVLQPPPRPAQPTSGKKRKRVTEDVPDCKALKPLLS-----GSIPVEQFVQTL 627
Query: 527 ESEDGFTVKVQDPEKSMI 544
E +KV+D K I
Sbjct: 628 EKHGFSDIKVEDTAKGHI 645
>gi|297682595|ref|XP_002819002.1| PREDICTED: integrator complex subunit 9 isoform 1 [Pongo abelii]
gi|383419913|gb|AFH33170.1| integrator complex subunit 9 isoform 1 [Macaca mulatta]
gi|384948168|gb|AFI37689.1| integrator complex subunit 9 isoform 1 [Macaca mulatta]
gi|387540780|gb|AFJ71017.1| integrator complex subunit 9 isoform 1 [Macaca mulatta]
Length = 658
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 148/558 (26%), Positives = 261/558 (46%), Gaps = 64/558 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 271
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 241 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 366
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 412
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 485
Query: 413 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 486 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 543
Query: 471 LFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDA 526
L KH L P P S + R + PD ++ K ++GS VE+ +
Sbjct: 544 LHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD-----CKVLKPLLSGSIPVEQFVQTL 598
Query: 527 ESEDGFTVKVQDPEKSMI 544
E +KV+D K I
Sbjct: 599 EKHGFSDIKVEDTAKGHI 616
>gi|332247649|ref|XP_003272972.1| PREDICTED: integrator complex subunit 9 isoform 2 [Nomascus
leucogenys]
Length = 634
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 147/558 (26%), Positives = 261/558 (46%), Gaps = 64/558 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 83 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 137
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 138 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 191
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 192 SGYALGSSNWIIRSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 247
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 248 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 282
Query: 241 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 283 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 342
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 343 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 401
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 412
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 402 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 461
Query: 413 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 462 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 519
Query: 471 LFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGSV--ERCMTDA 526
L KH L P P S + R + PD ++ K ++GS+ E+ +
Sbjct: 520 LHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD-----CKVLKPLLSGSIPLEQFVQTL 574
Query: 527 ESEDGFTVKVQDPEKSMI 544
E +KV+D K I
Sbjct: 575 EKHGFSDIKVEDTAKGHI 592
>gi|332247653|ref|XP_003272974.1| PREDICTED: integrator complex subunit 9 isoform 4 [Nomascus
leucogenys]
Length = 552
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 147/558 (26%), Positives = 261/558 (46%), Gaps = 64/558 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 1 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 55
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 56 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 109
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 110 SGYALGSSNWIIRSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 165
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 166 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 200
Query: 241 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 201 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 260
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 261 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 319
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 412
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 320 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 379
Query: 413 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 380 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 437
Query: 471 LFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGSV--ERCMTDA 526
L KH L P P S + R + PD ++ K ++GS+ E+ +
Sbjct: 438 LHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD-----CKVLKPLLSGSIPLEQFVQTL 492
Query: 527 ESEDGFTVKVQDPEKSMI 544
E +KV+D K I
Sbjct: 493 EKHGFSDIKVEDTAKGHI 510
>gi|402877908|ref|XP_003902653.1| PREDICTED: integrator complex subunit 9 isoform 3 [Papio anubis]
Length = 552
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 148/558 (26%), Positives = 261/558 (46%), Gaps = 64/558 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 1 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIER---VPKAQSASLWKNKDI 55
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 56 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 109
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 110 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 165
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 166 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 200
Query: 241 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 201 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 260
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 261 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 319
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 412
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 320 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 379
Query: 413 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 380 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 437
Query: 471 LFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDA 526
L KH L P P S + R + PD ++ K ++GS VE+ +
Sbjct: 438 LHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD-----CKVLKPLLSGSIPVEQFVQIL 492
Query: 527 ESEDGFTVKVQDPEKSMI 544
E +KV+D K I
Sbjct: 493 EKHGFSDIKVEDTAKGHI 510
>gi|332247651|ref|XP_003272973.1| PREDICTED: integrator complex subunit 9 isoform 3 [Nomascus
leucogenys]
Length = 637
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 147/558 (26%), Positives = 261/558 (46%), Gaps = 64/558 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 86 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 140
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 141 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 194
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 195 SGYALGSSNWIIRSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 250
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 251 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 285
Query: 241 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 286 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 345
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 346 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 404
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 412
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 405 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 464
Query: 413 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 465 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 522
Query: 471 LFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGSV--ERCMTDA 526
L KH L P P S + R + PD ++ K ++GS+ E+ +
Sbjct: 523 LHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD-----CKVLKPLLSGSIPLEQFVQTL 577
Query: 527 ESEDGFTVKVQDPEKSMI 544
E +KV+D K I
Sbjct: 578 EKHGFSDIKVEDTAKGHI 595
>gi|402877906|ref|XP_003902652.1| PREDICTED: integrator complex subunit 9 isoform 2 [Papio anubis]
Length = 637
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 148/558 (26%), Positives = 261/558 (46%), Gaps = 64/558 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 86 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 140
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 141 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 194
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 195 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 250
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 251 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 285
Query: 241 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 286 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 345
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 346 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 404
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 412
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 405 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 464
Query: 413 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 465 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 522
Query: 471 LFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDA 526
L KH L P P S + R + PD ++ K ++GS VE+ +
Sbjct: 523 LHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD-----CKVLKPLLSGSIPVEQFVQIL 577
Query: 527 ESEDGFTVKVQDPEKSMI 544
E +KV+D K I
Sbjct: 578 EKHGFSDIKVEDTAKGHI 595
>gi|402877904|ref|XP_003902651.1| PREDICTED: integrator complex subunit 9 isoform 1 [Papio anubis]
Length = 658
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 148/558 (26%), Positives = 261/558 (46%), Gaps = 64/558 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 271
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 241 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 366
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 412
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 485
Query: 413 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 486 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 543
Query: 471 LFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDA 526
L KH L P P S + R + PD ++ K ++GS VE+ +
Sbjct: 544 LHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD-----CKVLKPLLSGSIPVEQFVQIL 598
Query: 527 ESEDGFTVKVQDPEKSMI 544
E +KV+D K I
Sbjct: 599 EKHGFSDIKVEDTAKGHI 616
>gi|332247647|ref|XP_003272971.1| PREDICTED: integrator complex subunit 9 isoform 1 [Nomascus
leucogenys]
Length = 658
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 147/558 (26%), Positives = 261/558 (46%), Gaps = 64/558 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIRSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 271
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 241 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 366
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 412
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 485
Query: 413 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 486 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 543
Query: 471 LFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGSV--ERCMTDA 526
L KH L P P S + R + PD ++ K ++GS+ E+ +
Sbjct: 544 LHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD-----CKVLKPLLSGSIPLEQFVQTL 598
Query: 527 ESEDGFTVKVQDPEKSMI 544
E +KV+D K I
Sbjct: 599 EKHGFSDIKVEDTAKGHI 616
>gi|301766988|ref|XP_002918918.1| PREDICTED: integrator complex subunit 9-like [Ailuropoda
melanoleuca]
Length = 658
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 137/507 (27%), Positives = 239/507 (47%), Gaps = 59/507 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTMQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 271
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 366
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSLHG-DFSSDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 412
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 485
Query: 413 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 486 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADALVPMEIK-PGISLATVSAV 543
Query: 471 LFVNHGKHQLLPENEP----GGSSQTR 493
L KH L P P GG + R
Sbjct: 544 LHTKDNKHVLQPPPRPAQPTGGKKRKR 570
>gi|281349180|gb|EFB24764.1| hypothetical protein PANDA_007455 [Ailuropoda melanoleuca]
Length = 655
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 137/507 (27%), Positives = 239/507 (47%), Gaps = 59/507 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 104 MMALPYITEHTGFTGTVYATEPTMQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 158
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 159 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 212
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 213 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 268
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 269 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 303
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 304 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 363
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 364 LIQTNKLKHYPSLHG-DFSSDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 422
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 412
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 423 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 482
Query: 413 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 483 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADALVPMEIK-PGISLATVSAV 540
Query: 471 LFVNHGKHQLLPENEP----GGSSQTR 493
L KH L P P GG + R
Sbjct: 541 LHTKDNKHVLQPPPRPAQPTGGKKRKR 567
>gi|7023178|dbj|BAA91867.1| unnamed protein product [Homo sapiens]
gi|60650140|tpg|DAA05670.1| TPA_exp: beta-lactamase fold protein family member RC-74 [Homo
sapiens]
gi|78100157|tpg|DAA05726.1| TPA_exp: integrator complex subunit 9 [Homo sapiens]
Length = 658
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 148/558 (26%), Positives = 260/558 (46%), Gaps = 64/558 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 271
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 241 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSSAPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 366
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 412
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 485
Query: 413 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 486 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 543
Query: 471 LFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDA 526
L KH L P P S + R + PD ++ K ++GS VE+ +
Sbjct: 544 LHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD-----CKVLKPLLSGSIPVEQFVQTL 598
Query: 527 ESEDGFTVKVQDPEKSMI 544
E +KV+D K I
Sbjct: 599 EKHGFSDIKVEDTAKGHI 616
>gi|327282485|ref|XP_003225973.1| PREDICTED: integrator complex subunit 9-like isoform 1 [Anolis
carolinensis]
Length = 658
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 132/487 (27%), Positives = 231/487 (47%), Gaps = 53/487 (10%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W E
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKEV 161
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + I S
Sbjct: 162 QRLLPSPLK------DAVEVATWRRCYNMQEVNSALSKIQLVGYSQKIELFGAVQISPLS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQTSLKNSDVLILTGLTQIPT---- 271
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 366
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W + N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFKQPCVVFTGHPSLRFGDVVHFMELWGKSNLNTVIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVSFSDV 417
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ + + S
Sbjct: 426 DFSYLDALAPYQPLAMKCVYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPTQSHR 485
Query: 418 TSFSVS------HYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRL 471
T + Y E + +P + ++EI ++A +K +++ + L
Sbjct: 486 TDLMIDCLPPPMSYRRAEVLTLPFKRRYEKIEITPELADSLVPTEMK-PGISLATVTAVL 544
Query: 472 FVNHGKH 478
KH
Sbjct: 545 HTKDNKH 551
>gi|327282487|ref|XP_003225974.1| PREDICTED: integrator complex subunit 9-like isoform 2 [Anolis
carolinensis]
Length = 637
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 132/487 (27%), Positives = 231/487 (47%), Gaps = 53/487 (10%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W E
Sbjct: 86 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKEV 140
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + I S
Sbjct: 141 QRLLPSPLK------DAVEVATWRRCYNMQEVNSALSKIQLVGYSQKIELFGAVQISPLS 194
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 195 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQTSLKNSDVLILTGLTQIPT---- 250
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 251 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 285
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 286 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 345
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W + N+++ E
Sbjct: 346 LIQTNKLKHYPSIHG-DFSNDFKQPCVVFTGHPSLRFGDVVHFMELWGKSNLNTVIFTEP 404
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVSFSDV 417
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ + + S
Sbjct: 405 DFSYLDALAPYQPLAMKCVYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPTQSHR 464
Query: 418 TSFSVS------HYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRL 471
T + Y E + +P + ++EI ++A +K +++ + L
Sbjct: 465 TDLMIDCLPPPMSYRRAEVLTLPFKRRYEKIEITPELADSLVPTEMK-PGISLATVTAVL 523
Query: 472 FVNHGKH 478
KH
Sbjct: 524 HTKDNKH 530
>gi|224048949|ref|XP_002188839.1| PREDICTED: integrator complex subunit 9 [Taeniopygia guttata]
Length = 658
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 128/460 (27%), Positives = 223/460 (48%), Gaps = 56/460 (12%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W E
Sbjct: 107 MMALPYITEYTGFTGTVYATEPTVQIGRLLMEELV--NSIERV---PKAQSASMWKNKEV 161
Query: 63 LELLPSALRKIALGEDGSELG--GGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLP+ L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPAPLK------DAVEVSMWRKCYTMPEVNAALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 271
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLAMTVRNGGNVLVPCYPSGVIY 306
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L +P Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSNVPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 366
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFKQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW---------R 409
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ R
Sbjct: 426 DFSYLDALAPYQPLAMKCVYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPTQSHR 485
Query: 410 THVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIA 449
T + D ++S Y E + +P + ++EI D+A
Sbjct: 486 TDLMI-DCQPPAMS-YRRAEVLTLPYKRRYEKIEIMPDLA 523
>gi|390473533|ref|XP_002756844.2| PREDICTED: LOW QUALITY PROTEIN: integrator complex subunit 9
[Callithrix jacchus]
Length = 658
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 145/556 (26%), Positives = 259/556 (46%), Gaps = 60/556 (10%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 271
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 241 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 366
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 412
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 485
Query: 413 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 486 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 543
Query: 471 LFVNHGKHQLLPENEPGGSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDAES 528
L KH L P + + G P+ ++ K ++GS VE+ + E
Sbjct: 544 LHTKDNKHLLQPPPRSAQPTSGKKRKRVGDDVPD---CKVLKPLLSGSIPVEQFVQTLEK 600
Query: 529 EDGFTVKVQDPEKSMI 544
+KV+D K I
Sbjct: 601 HGFSDIKVEDTAKGHI 616
>gi|334312668|ref|XP_001382043.2| PREDICTED: integrator complex subunit 9 [Monodelphis domestica]
Length = 678
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 149/558 (26%), Positives = 259/558 (46%), Gaps = 64/558 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W E
Sbjct: 127 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKEV 181
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLP+ L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 182 QRLLPAPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 235
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 236 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 291
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 292 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 326
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L IP Y IS VA L + EWLC +Q K++ +P F H +
Sbjct: 327 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFAQIFAEWLCHNKQTKVYLPEPPFPHAE 386
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 387 LIQTNKLKHYPSIHG-DFSNDFKQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 445
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 412
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 446 DFSYLDALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 505
Query: 413 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 506 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPLEIK-PGISLATVSAV 563
Query: 471 LFVNHGKH--QLLPENEPGGSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDA 526
L KH Q P +S+ R + PD +L K ++GS V++ +
Sbjct: 564 LHTKDNKHVLQAPPRPSQPPASKKRKRVSDDIPD-----CKLLKPLLSGSIPVDQFVQTL 618
Query: 527 ESEDGFTVKVQDPEKSMI 544
E VKV+D K I
Sbjct: 619 EKHGFSDVKVEDTAKGHI 636
>gi|344281265|ref|XP_003412400.1| PREDICTED: integrator complex subunit 9 [Loxodonta africana]
Length = 688
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 136/501 (27%), Positives = 238/501 (47%), Gaps = 58/501 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 137 MMALPYITEHTGFTGTVYATEPTLQIGRLLMEELV--NFIERV---PKAQSASLWKNKDV 191
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 192 QRLLPSPLK------DAVEVSTWRRCYSMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 245
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NW+I ++Y+SGS+ + H D +++ SD++L + L+ + +
Sbjct: 246 SGYALGSSNWVIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLLLTGLTQIPT---- 301
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 302 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 336
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L +P Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 337 DLLECLYQYIDSAGLSNVPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 396
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H L W N+++ E
Sbjct: 397 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFLELWGKSSLNTVIFTEP 455
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 412
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 456 DFSYLDALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPTQSHR 515
Query: 413 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 516 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 573
Query: 471 LFVNHGKHQLLPENEPGGSSQ 491
L KH L P P S+Q
Sbjct: 574 LHTKDNKHVLQP---PPRSTQ 591
>gi|270012467|gb|EFA08915.1| hypothetical protein TcasGA2_TC006621 [Tribolium castaneum]
Length = 645
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 143/576 (24%), Positives = 265/576 (46%), Gaps = 59/576 (10%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
+ M+ LPF+T GF ++Y TE +IG+L++EEL+ Y + S QW
Sbjct: 106 LCMMALPFITEGTGFQGRVYATEPTLQIGRLLLEELV----NYID-QCPKASFAAQWKNL 160
Query: 61 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
+ LP L + +L + V +S++Q + + E+ G L + S
Sbjct: 161 --IHKLPYPLSDSFKPKSWKQLYN----MNDVNASLSRIQMVGYNEKIDVYGALKVMPSS 214
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII+ I Y+SGS+ + H D+ +++ +D+++ +DL+
Sbjct: 215 SGFCLGSSNWIITSDHEKIVYLSGSSTLTTHPRPMDHHSLKNADVLIMTDLTQ------- 267
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+SN D L +C +++ GG+VLIP GV
Sbjct: 268 ----------------TPISNPDS------MLGVLCVVVGLTLRGGGNVLIPCYPTGVVY 305
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
L E +++ M+ + P++ +S VA+ LAY+N + EWL +Q K++ + F H
Sbjct: 306 DLFECLSVKMQDLGVSNCPMFFVSPVADTSLAYSNILAEWLSSVKQNKVYVTEEPFPHGL 365
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 358
L+K K+ F V+S ++QEPC+VF H SLR G + + W + N ++ E
Sbjct: 366 LVKNNKLKHFKHVYSDGFSTDFQEPCVVFCGHPSLRFGDVVRFIELWGNNPRNCIVFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVSFSDV 417
+ D A+ P++P+ MKV C+ + + L++ L+P ++ PE + + VS ++
Sbjct: 426 DFDYTEALAPYQPLQMKVAHCAIDTSLNFTQANKLIRDLKPNTLVVPECYTQPPVSAPNL 485
Query: 418 TSFSVSH--------YSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKG 469
T + + + Y E I++P ++ +++ I +A K +K ++++ + G
Sbjct: 486 TDYVIENNHDRTLIPYKWGEVINLPLKRKHSQIFIETGVAQKIVPVEVK-PGISLSSITG 544
Query: 470 RLFVNHGKHQLLPENEPGGSSQTRPFLHWGSPDPENLLAELSKMGINGSVERCMTDAESE 529
L + H + + + WGS + + L +LS+ GI+ ES
Sbjct: 545 TLSIKDNVHSIQDLSSSVNKASKHVKYEWGSLNVTDFLQKLSQEGISEP------KVESH 598
Query: 530 DGFTVKVQDPEKSMIEVRAAVT-VISAADKNLASRI 564
V E ++I++ T V+ D+ L +++
Sbjct: 599 GNVVVIHLQEEDALIQLEDNSTHVVCTGDETLRTKL 634
>gi|71894979|ref|NP_001026271.1| integrator complex subunit 9 [Gallus gallus]
gi|82082171|sp|Q5ZKK2.1|INT9_CHICK RecName: Full=Integrator complex subunit 9; Short=Int9
gi|53130824|emb|CAG31741.1| hypothetical protein RCJMB04_10e20 [Gallus gallus]
Length = 658
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/487 (26%), Positives = 230/487 (47%), Gaps = 53/487 (10%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W E
Sbjct: 107 MMALPYITEYTGFTGTVYATEPTVQIGRLLMEELV--NSIERV---PKAQSASTWKNKEV 161
Query: 63 LELLPSALRKIALGEDGSELG--GGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLP+ L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPAPLK------DAVEVSMWRKCYTMPEVNAALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 271
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLAMTVRNGGNVLVPCYPSGVIY 306
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L +P Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSNVPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 366
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC++F+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFKQPCVIFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVSFSDV 417
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ + S S
Sbjct: 426 DFSYLDALAPYQPLAMKCVYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPSQSHR 485
Query: 418 TSFSVS------HYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRL 471
T + Y E + +P + ++EI ++A +K +++ + L
Sbjct: 486 TDLMIDCQPPPMSYRRAEVLTLPYKRRYEKIEIMPELADSLVPLEIK-PGISLATVSAML 544
Query: 472 FVNHGKH 478
KH
Sbjct: 545 HTKDNKH 551
>gi|326916723|ref|XP_003204654.1| PREDICTED: integrator complex subunit 9-like isoform 1 [Meleagris
gallopavo]
Length = 658
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/487 (26%), Positives = 230/487 (47%), Gaps = 53/487 (10%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W E
Sbjct: 107 MMALPYITEYTGFTGTVYATEPTVQIGRLLMEELV--NSIERV---PKAQSASMWKNKEV 161
Query: 63 LELLPSALRKIALGEDGSELG--GGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLP+ L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPAPLK------DAVEVSMWRKCYTMPEVNAALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 271
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLAMTVRNGGNVLVPCYPSGVIY 306
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L +P Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSNVPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 366
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC++F+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFKQPCVIFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVSFSDV 417
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ + S S
Sbjct: 426 DFSYLDALAPYQPLAMKCVYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPSQSHR 485
Query: 418 TSFSVS------HYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRL 471
T + Y E + +P + ++EI ++A +K +++ + L
Sbjct: 486 TDLMIDCQPPPMSYRRAEVLTLPYKRRYEKIEIMPELADSLVPLEIK-PGISLATVSAML 544
Query: 472 FVNHGKH 478
KH
Sbjct: 545 HTKDNKH 551
>gi|326916725|ref|XP_003204655.1| PREDICTED: integrator complex subunit 9-like isoform 2 [Meleagris
gallopavo]
Length = 637
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/458 (27%), Positives = 221/458 (48%), Gaps = 52/458 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W E
Sbjct: 86 MMALPYITEYTGFTGTVYATEPTVQIGRLLMEELV--NSIERV---PKAQSASMWKNKEV 140
Query: 63 LELLPSALRKIALGEDGSELG--GGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLP+ L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 141 QRLLPAPLK------DAVEVSMWRKCYTMPEVNAALSKIQLVGYSQKIELFGAVQVTPLS 194
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 195 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 250
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 251 -------------------ANPDGMVGEF------CSNLAMTVRNGGNVLVPCYPSGVIY 285
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L +P Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 286 DLLECLYQYIDSAGLSNVPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 345
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC++F+ H SLR G +H + W N+++ E
Sbjct: 346 LIQTNKLKHYPSIHG-DFSNDFKQPCVIFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 404
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVSFSDV 417
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ + S S
Sbjct: 405 DFSYLDALAPYQPLAMKCVYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPSQSHR 464
Query: 418 TSFSVS------HYSENETIHIPSLKESAELEIAADIA 449
T + Y E + +P + ++EI ++A
Sbjct: 465 TDLMIDCQPPPMSYRRAEVLTLPYKRRYEKIEIMPELA 502
>gi|114052212|ref|NP_001039828.1| integrator complex subunit 9 [Bos taurus]
gi|124012257|sp|Q2KJA6.1|INT9_BOVIN RecName: Full=Integrator complex subunit 9; Short=Int9
gi|86823872|gb|AAI05438.1| Integrator complex subunit 9 [Bos taurus]
Length = 658
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 131/490 (26%), Positives = 230/490 (46%), Gaps = 55/490 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 271
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDSMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 241 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSSIPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 366
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVS----- 413
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPTPAQSHR 485
Query: 414 ---FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 486 MDLMVDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 543
Query: 471 LFVNHGKHQL 480
L KH L
Sbjct: 544 LHTKDNKHVL 553
>gi|296484936|tpg|DAA27051.1| TPA: integrator complex subunit 9 [Bos taurus]
Length = 658
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 132/490 (26%), Positives = 233/490 (47%), Gaps = 55/490 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 271
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDSMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 241 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSSIPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 366
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 412
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 485
Query: 413 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 486 MDLMVDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 543
Query: 471 LFVNHGKHQL 480
L KH L
Sbjct: 544 LHTKDNKHVL 553
>gi|444721812|gb|ELW62523.1| Integrator complex subunit 9 [Tupaia chinensis]
Length = 611
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 203/410 (49%), Gaps = 45/410 (10%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 60 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 114
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 115 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 168
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 169 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 224
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 225 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 259
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 260 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 319
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 320 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 378
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 408
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 379 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 428
>gi|397521488|ref|XP_003830826.1| PREDICTED: integrator complex subunit 9 isoform 4 [Pan paniscus]
gi|403292473|ref|XP_003937272.1| PREDICTED: integrator complex subunit 9 isoform 4 [Saimiri
boliviensis boliviensis]
Length = 552
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 204/410 (49%), Gaps = 45/410 (10%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 1 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 55
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 56 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 109
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 110 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 165
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 166 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 200
Query: 241 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 201 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 260
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 261 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 319
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 408
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 320 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 369
>gi|338722341|ref|XP_003364525.1| PREDICTED: integrator complex subunit 9 isoform 4 [Equus caballus]
Length = 637
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 203/410 (49%), Gaps = 45/410 (10%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 86 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 140
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 141 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 194
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 195 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 250
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 251 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 285
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 286 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 345
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 346 LIQTNKLRHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 404
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 408
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 405 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 454
>gi|338722339|ref|XP_003364524.1| PREDICTED: integrator complex subunit 9 isoform 3 [Equus caballus]
Length = 637
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 203/410 (49%), Gaps = 45/410 (10%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 86 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 140
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 141 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 194
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 195 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 250
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 251 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 285
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 286 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 345
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 346 LIQTNKLRHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 404
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 408
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 405 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 454
>gi|189240387|ref|XP_001807249.1| PREDICTED: similar to cleavage and polyadenylation specificity
factor [Tribolium castaneum]
Length = 649
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 146/580 (25%), Positives = 268/580 (46%), Gaps = 63/580 (10%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
+ M+ LPF+T GF ++Y TE +IG+L++EEL+ Y + S QW
Sbjct: 106 LCMMALPFITEGTGFQGRVYATEPTLQIGRLLLEELV----NYID-QCPKASFAAQWKNL 160
Query: 61 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
+ LP L + +L + V +S++Q + + E+ G L + S
Sbjct: 161 --IHKLPYPLSDSFKPKSWKQLYN----MNDVNASLSRIQMVGYNEKIDVYGALKVMPSS 214
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII+ I Y+SGS+ + H D+ +++ +D+++ +DL+
Sbjct: 215 SGFCLGSSNWIITSDHEKIVYLSGSSTLTTHPRPMDHHSLKNADVLIMTDLTQ------- 267
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+SN D L +C +++ GG+VLIP GV
Sbjct: 268 ----------------TPISNPDS------MLGVLCVVVGLTLRGGGNVLIPCYPTGVVY 305
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
L E +++ M+ + P++ +S VA+ LAY+N + EWL +Q K++ + F H
Sbjct: 306 DLFECLSVKMQDLGVSNCPMFFVSPVADTSLAYSNILAEWLSSVKQNKVYVTEEPFPHGL 365
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 358
L+K K+ F V+S ++QEPC+VF H SLR G + + W + N ++ E
Sbjct: 366 LVKNNKLKHFKHVYSDGFSTDFQEPCVVFCGHPSLRFGDVVRFIELWGNNPRNCIVFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVSFSDV 417
+ D A+ P++P+ MKV C+ + + L++ L+P ++ PE + + VS ++
Sbjct: 426 DFDYTEALAPYQPLQMKVAHCAIDTSLNFTQANKLIRDLKPNTLVVPECYTQPPVSAPNL 485
Query: 418 TSFSVSH--------YSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKG 469
T + + + Y E I++P ++ +++ I +A K +K ++++ + G
Sbjct: 486 TDYVIENNHDRTLIPYKWGEVINLPLKRKHSQIFIETGVAQKIVPVEVK-PGISLSSITG 544
Query: 470 RLFVNHGKHQLLPENEPGGSSQTRPFLH----WGSPDPENLLAELSKMGINGSVERCMTD 525
L + H + + SS + H WGS + + L +LS+ GI+
Sbjct: 545 TLSIKDNVHSIQVFFKDLSSSVNKASKHVKYEWGSLNVTDFLQKLSQEGISEP------K 598
Query: 526 AESEDGFTVKVQDPEKSMIEVRAAVT-VISAADKNLASRI 564
ES V E ++I++ T V+ D+ L +++
Sbjct: 599 VESHGNVVVIHLVKEDALIQLEDNSTHVVCTGDETLRTKL 638
>gi|194208296|ref|XP_001493401.2| PREDICTED: integrator complex subunit 9 isoform 1 [Equus caballus]
Length = 658
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 203/410 (49%), Gaps = 45/410 (10%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 271
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 366
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLRHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 408
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 475
>gi|351701446|gb|EHB04365.1| Integrator complex subunit 9, partial [Heterocephalus glaber]
Length = 655
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 204/410 (49%), Gaps = 45/410 (10%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 104 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 158
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G++ + S
Sbjct: 159 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGVVQVTPLS 212
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 213 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 268
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +++ GG+VL+P GV
Sbjct: 269 -------------------ANPDGMVGEF------CSNLALTIRNGGNVLVPCYPSGVIY 303
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L +P Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 304 DLLECLYQYIDSAGLSSVPFYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 363
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 364 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 422
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 408
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 423 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 472
>gi|338722337|ref|XP_003364523.1| PREDICTED: integrator complex subunit 9 isoform 2 [Equus caballus]
Length = 658
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 203/410 (49%), Gaps = 45/410 (10%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 271
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 366
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLRHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 408
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 475
>gi|449267545|gb|EMC78479.1| Integrator complex subunit 9, partial [Columba livia]
Length = 658
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 125/458 (27%), Positives = 220/458 (48%), Gaps = 52/458 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W E
Sbjct: 107 MMALPYITEYTGFAGTVYATEPTVQIGRLLMEELV--NSIERV---PKAQSASMWKNKEV 161
Query: 63 LELLPSALRKIALGEDGSELG--GGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLP+ L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPAPLK------DAVEVSMWRKCYTMPEVNAALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 271
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLAMTVRNGGNVLVPCYPSGVIY 306
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L +P Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSNVPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 366
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFKQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWR----THVSF 414
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ T
Sbjct: 426 DFSYLDALAPYQPLAMKCVYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPTQAHR 485
Query: 415 SDV---TSFSVSHYSENETIHIPSLKESAELEIAADIA 449
+D+ Y E + +P + ++EI ++A
Sbjct: 486 TDLMIDCQPPPMSYRRAEVLTLPYKRRYEKIEIMPELA 523
>gi|397521486|ref|XP_003830825.1| PREDICTED: integrator complex subunit 9 isoform 3 [Pan paniscus]
gi|403292469|ref|XP_003937270.1| PREDICTED: integrator complex subunit 9 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 634
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 204/410 (49%), Gaps = 45/410 (10%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 83 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 137
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 138 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 191
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 192 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 247
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 248 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 282
Query: 241 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 283 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 342
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 343 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 401
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 408
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 402 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 451
>gi|397521484|ref|XP_003830824.1| PREDICTED: integrator complex subunit 9 isoform 2 [Pan paniscus]
gi|403292471|ref|XP_003937271.1| PREDICTED: integrator complex subunit 9 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 637
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 204/410 (49%), Gaps = 45/410 (10%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 86 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 140
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 141 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 194
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 195 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 250
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 251 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 285
Query: 241 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 286 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 345
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 346 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 404
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 408
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 405 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 454
>gi|397521482|ref|XP_003830823.1| PREDICTED: integrator complex subunit 9 isoform 1 [Pan paniscus]
gi|403292467|ref|XP_003937269.1| PREDICTED: integrator complex subunit 9 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 658
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 204/410 (49%), Gaps = 45/410 (10%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 271
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 241 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 366
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 408
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 475
>gi|354471564|ref|XP_003498011.1| PREDICTED: integrator complex subunit 9 [Cricetulus griseus]
Length = 658
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 203/410 (49%), Gaps = 45/410 (10%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTMQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 271
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 366
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 408
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 475
>gi|119583908|gb|EAW63504.1| integrator complex subunit 9, isoform CRA_a [Homo sapiens]
Length = 525
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 204/410 (49%), Gaps = 45/410 (10%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 271
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 241 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 366
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 408
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 475
>gi|73993860|ref|XP_543216.2| PREDICTED: integrator complex subunit 9 [Canis lupus familiaris]
Length = 658
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 203/410 (49%), Gaps = 45/410 (10%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 271
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 366
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSLHG-DFSSDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 408
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 475
>gi|410956456|ref|XP_003984858.1| PREDICTED: integrator complex subunit 9 [Felis catus]
Length = 637
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 203/410 (49%), Gaps = 45/410 (10%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 86 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 140
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 141 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 194
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 195 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 250
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 251 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 285
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 286 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 345
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 346 LIQTNKLKHYPSLHG-DFSSDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 404
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 408
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 405 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 454
>gi|148227810|ref|NP_001086545.1| integrator complex subunit 9 [Xenopus laevis]
gi|82182872|sp|Q6DFF4.1|INT9_XENLA RecName: Full=Integrator complex subunit 9; Short=Int9
gi|49904072|gb|AAH76784.1| MGC83696 protein [Xenopus laevis]
Length = 658
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 224/459 (48%), Gaps = 54/459 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITERTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSATVWKHKDV 161
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLP+ L+ D E+ C + V +SK+Q + + ++ G++ + S
Sbjct: 162 QRLLPAPLK------DAVEVFTWKKCYSMQEVNAALSKIQLVGYSQKIELFGVVQVTPLS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NW+I ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWVIQSHYEKVSYVSGSSLLTTHPQPMDQTSLKNSDVLILTGLTQIPT---- 271
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS ++++GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLAMTIRSGGNVLVPCYPSGVIY 306
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L +P Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSNVPFYFISPVANSSLEFSQIFAEWLCHNKQNKVYLPEPPFPHAE 366
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P +H ++++PC+VF+ H +LR G +H + W N+++ E
Sbjct: 367 LIQSNKLKHYPNIHG-DFSNDFKQPCVVFTGHPTLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 412
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 426 DFSYLDALAPYQPLAMKCVYCPIDTRLNFIQVTKLLKEVQPLHVVCPEQYTQPPATQSHR 485
Query: 413 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIA 449
S D +S Y E + +P + ++EI ++A
Sbjct: 486 SDLMIDCQPPPMS-YHRAEVLTLPFKRRYEKIEIMPELA 523
>gi|242025660|ref|XP_002433242.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212518783|gb|EEB20504.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 664
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 150/604 (24%), Positives = 272/604 (45%), Gaps = 88/604 (14%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMK- 59
+ ML LPF+T GF +Y TE +IG+L +EEL+ E+ E+S K
Sbjct: 106 LCMLALPFVTEDTGFKGVVYCTEPTMQIGRLFLEELV----EW-----IEQSPKSNVAKH 156
Query: 60 WEE-LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKA 118
W+E L LLP L + + + V +S++Q + + E+ G L
Sbjct: 157 WKEVLHLLPPPLNDAFKPRNWRHIYN----MQQVNSALSRIQVVGYDEKLDIYGALKAIP 212
Query: 119 FSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTE 178
SSG +G+ NWII IAY+SGS + H A++ ++++ + L+ +
Sbjct: 213 VSSGYCLGSANWIIQTDYEKIAYVSGSTTLTTHPKPMHQNALRNVNVLIITALTQTPT-- 270
Query: 179 DIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGV 238
SN D + E+ C +V+ GG VL+P GV
Sbjct: 271 ---------------------SNPDSMLGEL------CINTAMTVRNGGCVLLPCYPSGV 303
Query: 239 FLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAH 297
L E ++ +++ + L +IP++ IS VA+ LAY+N + EWL + +Q K++ + F H
Sbjct: 304 VYDLFECLSSYLDATGLTQIPMFFISPVADTSLAYSNILAEWLSQAKQNKVYLPEEPFPH 363
Query: 298 VKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRW-SGDHNSLLVL 356
L+K ++ F +++ +++PC+VF H SLR G ++H + W S +S++
Sbjct: 364 AFLVKNSRLKHFKNIYAENFSAEFRQPCVVFCGHPSLRFGDSVHFMELWGSNPLHSVIFT 423
Query: 357 ENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-------- 408
E + A+ PF+P+ MKV+ C + + L++ L+P ++ PE +
Sbjct: 424 EPDFPYLDAISPFQPLQMKVVHCPIDTSLNFTQATKLIRELKPGTLVIPESYTKNPLGSS 483
Query: 409 -RTHVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRL 467
RT + D E I +P ++ + E++AD+AS+ + +++T +
Sbjct: 484 QRTDL-LIDAQERPTLTMKRGEVIKLPVKRKKVKAEMSADLASEL-IPCETRPGVSLTSV 541
Query: 468 KGRLFVNHGKHQL--------LPENEPGGSS------------QTRPFLHWGSPDPENLL 507
G+L +N K+++ L E + + +P WG D + +
Sbjct: 542 TGKLILNDNKYKIESLESNQDLKRKESSSGTCEDSDTCGDVLPKRKPTYEWGWLDIDQFV 601
Query: 508 AELSKMGINGSVERCMTDAESED---GFTVKVQDPEKSMIEVRAAVTVISAADKNLASRI 564
+LS+ GIN DA+ E G+ + +Q+ + + + +I D+ L ++
Sbjct: 602 QKLSQEGIN--------DAKVEHGNPGYIIHLQESDTLITVEDSQTHIICEGDRQLRLKL 653
Query: 565 VKAM 568
A+
Sbjct: 654 RDAL 657
>gi|344254234|gb|EGW10338.1| Integrator complex subunit 9 [Cricetulus griseus]
Length = 551
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 202/409 (49%), Gaps = 45/409 (11%)
Query: 4 LGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEEL 63
+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 1 MALPYITEHTGFTGTVYATEPTMQIGRLLMEELV--NFIER---VPKAQSASLWKNKDIQ 55
Query: 64 ELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS 121
LLPS L+ D E+ C + V +SK+Q + + ++ G + + SS
Sbjct: 56 RLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLSS 109
Query: 122 GLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDID 181
G +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 110 GYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT----- 164
Query: 182 QSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQ 241
+N D V E CS +V+ GG+VL+P GV
Sbjct: 165 ------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIYD 200
Query: 242 LLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKL 300
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +L
Sbjct: 201 LLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAEL 260
Query: 301 IKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLENE 359
I+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E +
Sbjct: 261 IQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEPD 319
Query: 360 VDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 408
A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 320 FSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 368
>gi|291235488|ref|XP_002737676.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 624
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 154/563 (27%), Positives = 255/563 (45%), Gaps = 81/563 (14%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
ML LPF+T GF +Y TE + G+ +MEEL+ EY + + + +W +
Sbjct: 108 MLALPFITEYTGFHGIVYATEPTVQSGRQLMEELV----EYIERVPKLQPAT-KWKEPNI 162
Query: 63 LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSG 122
L+ LPS LR+ + C + +SKV+ + E+ G L + SSG
Sbjct: 163 LKTLPSPLRESLHVPSWRK----CYNKHDINAAMSKVKLAGYSEKLNLYGALSMVPLSSG 218
Query: 123 LDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQ 182
IG+CNW+I + YISGS+ + H + ++ SD+++ L+ L+ T
Sbjct: 219 YCIGSCNWVIQSDFEKVTYISGSSLLTTHPLPMVTGPMKNSDVLI---LTGLNQT----- 270
Query: 183 SSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQL 242
+F+ DN L CS ++K GG+VL+P GV L
Sbjct: 271 PTFNPDN---------------------MLGEFCSNLAVTIKNGGNVLVPCCPSGVIYDL 309
Query: 243 LEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLI 301
E ++ FM+ + L +IP+Y IS VA+ LAY+ EWLC +Q K++ +P F H +L+
Sbjct: 310 FECLSAFMDSAGLTQIPLYFISHVADSSLAYSQIFAEWLCPAKQSKVYLPEPPFPHGELV 369
Query: 302 KEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWS-GDHNSLLVLENEV 360
K ++ FP++H + ++ PC+VF+ H SLR G +H + W N+++ E
Sbjct: 370 KGGRLKHFPSIHG-EFTNQFKTPCVVFTGHPSLRFGDAVHFMELWGKSSMNTVIFTEPSF 428
Query: 361 DAELAVLPFKPISMKVLQC------SFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSF 414
+ A+ PF+P+SMK C +F KL K L ++ P L P H
Sbjct: 429 NYLDALAPFQPLSMKSCYCPIDPTMNFSQANKLIKELKALHVIIPDAYLSPPPLLPHRDD 488
Query: 415 SDV-TSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFV 473
V T + + + + +P + ++EI ++ K + K++K R + +
Sbjct: 489 LIVETDPPPTPFKRADVLTLPVRRRQEKIEITSEPLPKAPVVVGKKRK----RGEEEIIN 544
Query: 474 NHGKHQLLPENEPGGSSQTRPFLHWGSPDPENLLAELSKMGINGSVERCMTDAESED--- 530
H KH + +G+ D E+ + L+K G+ TD + ED
Sbjct: 545 KHPKHYV-----------------YGNLDIEDFVRNLTKHGV--------TDMKVEDTPG 579
Query: 531 GFTVKVQDPEKSMIEVRAAVTVI 553
G V + E ++I+V T I
Sbjct: 580 GHIVHLPS-EDTIIQVEEGSTHI 601
>gi|62859992|ref|NP_001016601.1| integrator complex subunit 9 [Xenopus (Silurana) tropicalis]
Length = 658
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 149/591 (25%), Positives = 267/591 (45%), Gaps = 79/591 (13%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITERTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSATLWKHKDV 161
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLP L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPVPLK------DAVEVFTWRKCYTMQEVNAALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NW+I ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWVIQSHYEKVSYVSGSSLLTTHPQPMDQTSLKNSDVLILTGLTQIPT---- 271
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS ++++GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLAMTIRSGGNVLVPCYPSGVIY 306
Query: 241 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L +P Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSSVPFYFISPVANSSLEFSQIFAEWLCHNKQNKVYLPEPPFPHAE 366
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H +LR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFKQPCVVFTGHPTLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWR----THVSF 414
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ T
Sbjct: 426 DFSYLDALAPYQPLAMKCVYCPIDTRLNFIQVTKLLKEVQPLHVVCPEQYTQPPATQAHR 485
Query: 415 SDV---TSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRL 471
SD+ Y E + +P + ++EI ++A +K +++ + L
Sbjct: 486 SDLMIDCQPPPMSYRRAEVLALPFKRRYEKIEIMPELAESLVPFEIK-PGVSLATVSAVL 544
Query: 472 FVNHGKHQLLP-------------ENEPGGSSQTRPF--LHWGSPDPENLLAELSKMGIN 516
KH L P + + S +T+PF L GS + + L K G
Sbjct: 545 HTKDNKHVLQPPPKVAAPPASKKRKRQAEESPETQPFKPLLSGSIPVDQFVQTLEKHG-- 602
Query: 517 GSVERCMTDAESED---GFTVKVQDPEKSMIEVRAAVTVISAADKNLASRI 564
+D + ED G V +Q+ E + + +I D+ L R+
Sbjct: 603 ------FSDVKIEDTAKGHIVHLQEAETLIQFEEDSTHIICEHDERLRVRL 647
>gi|392333345|ref|XP_003752866.1| PREDICTED: integrator complex subunit 9-like isoform 2 [Rattus
norvegicus]
gi|392353606|ref|XP_003751552.1| PREDICTED: integrator complex subunit 9-like isoform 1 [Rattus
norvegicus]
Length = 637
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 148/558 (26%), Positives = 261/558 (46%), Gaps = 64/558 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W E
Sbjct: 86 MMALPYITEHTGFTGTVYATEPTMQIGRLLMEELV--NFIERV---PKAQSASLWKNKEI 140
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 141 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 194
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 195 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 250
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 251 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 285
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 286 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 345
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ + ++H ++++PC++F+ H SLR G +H + W N+++ E
Sbjct: 346 LIQTNKLKHYRSIHG-DFSHDFRQPCVLFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 404
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 412
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 405 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 464
Query: 413 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 465 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 522
Query: 471 LFVNHGKHQL--LPENEPGGSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDA 526
L KH L P+ SS+ R + PD +++ K ++GS VE+ +
Sbjct: 523 LHTKDNKHVLQPPPKPTQPTSSKKRKRVSEDVPD-----SKVLKPLLSGSIPVEQFVQTL 577
Query: 527 ESEDGFTVKVQDPEKSMI 544
E +KV+D K I
Sbjct: 578 EKHGFSDIKVEDTAKGHI 595
>gi|328701441|ref|XP_001952248.2| PREDICTED: integrator complex subunit 9-like isoform 1
[Acyrthosiphon pisum]
gi|328701443|ref|XP_003241601.1| PREDICTED: integrator complex subunit 9-like isoform 2
[Acyrthosiphon pisum]
Length = 657
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 199/412 (48%), Gaps = 46/412 (11%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMK- 59
M ML LPF+T GF +Y+TE IG+L +EEL+ E+S P K
Sbjct: 108 MTMLALPFITENTGFKGVVYMTEPTLHIGKLFLEELVDF---------VEQSPKPNVAKY 158
Query: 60 WEE-LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKA 118
W+E L LLP L +L +A V +++VQ + + ++ G L + A
Sbjct: 159 WKEILHLLPPPLCNSFKPHTWKQLYS----LAQVNSSLTRVQMISYDQKIEITGALTVTA 214
Query: 119 FSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTE 178
SSG +G+ NW+I + Y+S ++ + H D ++ +DL+L S L+ +
Sbjct: 215 VSSGYCLGSSNWVIYLESKKLVYVSNTSTLTTHPRPMDQVNLKNADLMLLSSLTQAPA-- 272
Query: 179 DIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGV 238
+N D + E+ C +++ GSVLIP GV
Sbjct: 273 ---------------------ANPDSMLGEL------CLSVAVTLRNNGSVLIPCYPSGV 305
Query: 239 FLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAH 297
L E ++ ++ ++L +IP+Y IS VA L Y+N + EWL + +Q K++ + F H
Sbjct: 306 VYDLFECLSSHLDSTALGQIPMYFISPVAHSSLEYSNILAEWLSQSKQNKVYFPEEPFPH 365
Query: 298 VKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRW-SGDHNSLLVL 356
+L+K ++ F V++ L + ++PC+VF H SLR G +H + W + N+++
Sbjct: 366 AQLVKSGRLKHFKHVYTDDLWNDLRQPCVVFCGHPSLRFGDVVHFVEYWGTNPQNTIIFT 425
Query: 357 ENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 408
E E A+ PF+P+SMK + C + + ++K L+P +++ PE +
Sbjct: 426 EPEFPYLEALAPFQPLSMKAMHCPIDTSMNFTQANKMIKDLKPAVLILPERY 477
>gi|62661637|ref|XP_214216.3| PREDICTED: integrator complex subunit 9-like isoform 2 [Rattus
norvegicus]
gi|109502600|ref|XP_001066109.1| PREDICTED: integrator complex subunit 9-like isoform 1 [Rattus
norvegicus]
Length = 658
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 148/558 (26%), Positives = 261/558 (46%), Gaps = 64/558 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W E
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTMQIGRLLMEELV--NFIERV---PKAQSASLWKNKEI 161
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 271
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 366
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ + ++H ++++PC++F+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYRSIHG-DFSHDFRQPCVLFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 412
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 485
Query: 413 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 486 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 543
Query: 471 LFVNHGKHQL--LPENEPGGSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDA 526
L KH L P+ SS+ R + PD +++ K ++GS VE+ +
Sbjct: 544 LHTKDNKHVLQPPPKPTQPTSSKKRKRVSEDVPD-----SKVLKPLLSGSIPVEQFVQTL 598
Query: 527 ESEDGFTVKVQDPEKSMI 544
E +KV+D K I
Sbjct: 599 EKHGFSDIKVEDTAKGHI 616
>gi|149030292|gb|EDL85348.1| similar to hypothetical protein FLJ10871 (predicted) [Rattus
norvegicus]
Length = 595
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 148/558 (26%), Positives = 261/558 (46%), Gaps = 64/558 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W E
Sbjct: 44 MMALPYITEHTGFTGTVYATEPTMQIGRLLMEELV--NFIERV---PKAQSASLWKNKEI 98
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 99 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 152
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 153 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 208
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 209 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 243
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 244 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 303
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ + ++H ++++PC++F+ H SLR G +H + W N+++ E
Sbjct: 304 LIQTNKLKHYRSIHG-DFSHDFRQPCVLFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEP 362
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW------RTHV 412
+ A+ P++P++MK + C + +V LLK +QP V+ PE++ ++H
Sbjct: 363 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHR 422
Query: 413 S--FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
D ++S Y E + +P + ++EI ++A +K +++ +
Sbjct: 423 MDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMPELADSLVPMEIK-PGISLATVSAV 480
Query: 471 LFVNHGKHQL--LPENEPGGSSQTRPFLHWGSPDPENLLAELSKMGINGS--VERCMTDA 526
L KH L P+ SS+ R + PD +++ K ++GS VE+ +
Sbjct: 481 LHTKDNKHVLQPPPKPTQPTSSKKRKRVSEDVPD-----SKVLKPLLSGSIPVEQFVQTL 535
Query: 527 ESEDGFTVKVQDPEKSMI 544
E +KV+D K I
Sbjct: 536 EKHGFSDIKVEDTAKGHI 553
>gi|195019859|ref|XP_001985070.1| GH14706 [Drosophila grimshawi]
gi|193898552|gb|EDV97418.1| GH14706 [Drosophila grimshawi]
Length = 657
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 140/549 (25%), Positives = 254/549 (46%), Gaps = 67/549 (12%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
+ ML LP++T GF K+Y TE +IG+ +EEL+ +Y + + + W
Sbjct: 106 LNMLALPYITENTGFKGKVYATEPTLQIGRFFLEELV----DYIEV-SPKACTARLWK-- 158
Query: 61 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
++L LLPS L + + + V+ +SKV + + E+ G I S
Sbjct: 159 DKLHLLPSPLCDAFRAKKWRTIFS----LKDVQGSLSKVTIMGYDEKLDILGAFIATPVS 214
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NW++S A I Y+SGS+ + H + A++ +D+++ + L+
Sbjct: 215 SGYCLGSSNWVLSTAHEKICYVSGSSTLTTHPRPINQSALKHADVLIMTGLTQA------ 268
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+V KL +C +++ GS LIP GV
Sbjct: 269 -----------------------PTVNPDTKLGELCMNVALTIRNNGSALIPCYPSGVVY 305
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
L E + +E + L +P++ IS VA+ LAY+N + EWL +Q K++ D F H
Sbjct: 306 DLFECLTQNLENAGLNNVPMFFISPVADSSLAYSNILAEWLSSAKQNKVYLPDDPFPHAF 365
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 358
++ K+ + V S ++++PC+VF H SLR G +H + W + +NS++ E
Sbjct: 366 YLRNNKLKHYNHVFSEGFSKDFRQPCVVFCGHPSLRFGDAVHFIEMWGNNPNNSIIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVS---- 413
+ + PF+P++MK C + Q+ L+K L+P +++ PE + + H S
Sbjct: 426 DFPYLQVLAPFQPLAMKAFYCPIDTSLNYQQANKLIKELKPNVLVIPEAYTKPHPSAPNL 485
Query: 414 FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFV 473
F + + + E I +P ++ + IA+++A K R + ++++ L G L V
Sbjct: 486 FIEQPDKKIITFKCGEIIRLPLKRKLDRIYIASELAQKILAREVAT-GVSLSTLTGVLQV 544
Query: 474 NHGKHQLLP-----ENEPGGSSQTRPFLHWGSPDPENLLA----ELSKMGINGSVERCMT 524
H + P ++EPG SS + +P E++L E + ++ ++R
Sbjct: 545 KDKVHCIQPCTESVKDEPGTSSMSS-----AAPSKEDVLKNVKYEYGTIDVDALMKRL-- 597
Query: 525 DAESEDGFT 533
++DGF+
Sbjct: 598 ---AQDGFS 603
>gi|157126894|ref|XP_001660997.1| cleavage and polyadenylation specificity factor [Aedes aegypti]
gi|108873097|gb|EAT37322.1| AAEL010663-PA [Aedes aegypti]
Length = 665
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 145/579 (25%), Positives = 262/579 (45%), Gaps = 79/579 (13%)
Query: 2 GMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWE 61
M+ LPF+T GF+ +Y TE +IG+ +EEL+ EY + E ++ W+
Sbjct: 108 NMMALPFITEGTGFTGTVYATEPTLQIGRFFLEELV----EYIEASPKENTA----RVWK 159
Query: 62 ELE-LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
+++ LLP L + ++ L + V +++VQ + ++ G L + S
Sbjct: 160 DIQHLLPPPLNDVFKPKNWRHLFS----MDAVNKSLARVQMTGYDQKLDIFGALQVTPVS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII+ + I+YISGS+ + H + A++ SD+++ + L+
Sbjct: 216 SGFCLGSSNWIINSGQEKISYISGSSTLTTHPRPINQSALKYSDVVIMTGLT-------- 267
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
Q+ + + EL C + +++ GGSVLIP GV
Sbjct: 268 -QAPHVNPDGMLGEL--------------------CMNVVMTLRNGGSVLIPCYPSGVVY 306
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
L E ++ ++ +IP++ IS VA+ LAY+N + EWL +Q K++ D F H
Sbjct: 307 DLFECLSSSLDNQGFAQIPMFFISPVADSSLAYSNILAEWLSTSKQNKVYIPDEPFPHGS 366
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRW-SGDHNSLLVLEN 358
L+K K+ F ++S +++PC+VF H SLR G +H + W S ++++ E
Sbjct: 367 LVKNAKLKHFKHIYSEGFSTEFRQPCVVFCGHPSLRFGDAVHFVELWGSNPQHTIIFTEP 426
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW---------R 409
+ A+ P++P+++K + C + Q+ L+K L+P +++ PE + +
Sbjct: 427 DFPYLQALAPYQPLAIKTVYCPIETSLNFQQANKLIKELKPGVLVIPENYTQPPPIAPHK 486
Query: 410 THVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKG 469
T + + + E I +P ++ + + + IA + Q + I+ + G
Sbjct: 487 TDLVIDQTPDKMIIKFKRGEVIKLPLKRKRSRIYLDPQIARSLVPHEV-QPGVTISSVTG 545
Query: 470 RLFVNHGKHQL---------LPENEPGGSSQTRPFLH---------WGSPDPENLLAELS 511
L V H L L E + +++ +P H WGS D L +L+
Sbjct: 546 VLHVKDNIHDLHPLEPTPEELEEQKTAKTAKLQPPSHNRYRNVKYEWGSLDVNLFLKKLA 605
Query: 512 KMGIN------GSVERCMTDAESEDGFTVKVQDPEKSMI 544
+ GI G V+ SED +KV D S++
Sbjct: 606 QDGITDIKVEQGGVDELTLHLASEDTM-IKVSDKTTSIV 643
>gi|148704091|gb|EDL36038.1| DNA segment, Chr 14, ERATO Doi 231, expressed, isoform CRA_c [Mus
musculus]
Length = 624
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 202/410 (49%), Gaps = 45/410 (10%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 73 MMALPYITEHTGFTGTVYATEPTMQIGRLLMEELV--NFIER---VPKAQSASLWKNKDI 127
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 128 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 181
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 182 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 237
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 238 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 272
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 273 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 332
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ + ++H ++++PC++F+ H SLR G +H + W N+++ E
Sbjct: 333 LIQTNKLKHYRSIHG-DFSNDFRQPCVLFTGHPSLRFGDVVHFMELWGKSSLNTIIFTEP 391
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 408
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 392 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 441
>gi|359279877|ref|NP_001240660.1| integrator complex subunit 9 isoform 2 [Mus musculus]
Length = 634
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 202/410 (49%), Gaps = 45/410 (10%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 83 MMALPYITEHTGFTGTVYATEPTMQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 137
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 138 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 191
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 192 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 247
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 248 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 282
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 283 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 342
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ + ++H ++++PC++F+ H SLR G +H + W N+++ E
Sbjct: 343 LIQTNKLKHYRSIHG-DFSNDFRQPCVLFTGHPSLRFGDVVHFMELWGKSSLNTIIFTEP 401
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 408
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 402 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 451
>gi|357623215|gb|EHJ74459.1| hypothetical protein KGM_11568 [Danaus plexippus]
Length = 635
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 133/528 (25%), Positives = 244/528 (46%), Gaps = 68/528 (12%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LPF+T GF ++Y TE +IG+ +EEL ++ +W+E
Sbjct: 108 MMALPFITEDTGFKGQVYATEPTLQIGRFYLEEL-------SEWVSGSGGGAGAAKRWKE 160
Query: 63 L-ELLP----SALRKIA---LGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGIL 114
L LLP SALR A L G+ + +S+V+ + + E G L
Sbjct: 161 LVHLLPPPLASALRPRAWRRLFSPGA-----------LARALSRVRVVGYDERVDIYGAL 209
Query: 115 IIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSL 174
A SSG +G+ NW++ A +AY+SGS+ + H + A++G+DL++ + L+
Sbjct: 210 DATAVSSGFCLGSANWVLRSAHEKVAYVSGSSTLTTHPRPINQAALRGADLLVLAALTQT 269
Query: 175 DSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPIN 234
+ +N + ++ L C A +++AGGSVL P+
Sbjct: 270 PA-------------HNPDHMLGDL----------------CVHATVTLRAGGSVLCPVY 300
Query: 235 RVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDP 293
GV LLE ++ +E + L +P+Y++S VA+ LAY+N + EW+ +Q +++ +
Sbjct: 301 PSGVLYDLLECLSAHLEGAGLAHVPLYVVSPVADSSLAYSNILAEWVSVGKQARVYLPEE 360
Query: 294 LFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNS 352
F H L++ ++ ++H ++++PC+VF H SLR G +HL+ W+ + ++
Sbjct: 361 PFPHAALVRAGRLKHARSLHDDAFSADFRQPCVVFCGHPSLRFGAAVHLVELWANNPAHA 420
Query: 353 LLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHV 412
++ E + A+ PF+P+SMK C + + L++ L+P+ + PE++
Sbjct: 421 IIFTEPDFPHAEALAPFQPLSMKAFHCPIDTSLNYSQANKLVRELRPRELALPEQYAASG 480
Query: 413 SFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKK-LNITRLKGRL 471
+ + S + HI + ++ + + R L + L L L
Sbjct: 481 GTAAGGGAAASGGAGGTRPHIGA-------DVPTVVVRRGAARSLGLRAGLRAAPLTAAL 533
Query: 472 FVNHGKHQLLPE---NEPGGSSQTRPFLHWGSPDPENLLAELSKMGIN 516
V + +L+ PG + P LHW + D E L+ L++ G++
Sbjct: 534 RVRDARLELVAPAACGTPGTEAAPAPVLHWSALDVEALVRALAREGVS 581
>gi|81878401|sp|Q8K114.1|INT9_MOUSE RecName: Full=Integrator complex subunit 9; Short=Int9
gi|20809846|gb|AAH28953.1| Ints9 protein [Mus musculus]
gi|33585775|gb|AAH55700.1| Ints9 protein [Mus musculus]
gi|74205768|dbj|BAE23199.1| unnamed protein product [Mus musculus]
gi|74213888|dbj|BAE29371.1| unnamed protein product [Mus musculus]
Length = 658
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 202/410 (49%), Gaps = 45/410 (10%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTMQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 271
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 366
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ + ++H ++++PC++F+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYRSIHG-DFSNDFRQPCVLFTGHPSLRFGDVVHFMELWGKSSLNTIIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 408
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 475
>gi|31981980|ref|NP_700463.2| integrator complex subunit 9 isoform 1 [Mus musculus]
gi|26346532|dbj|BAC36917.1| unnamed protein product [Mus musculus]
Length = 687
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 202/410 (49%), Gaps = 45/410 (10%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 136 MMALPYITEHTGFTGTVYATEPTMQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 190
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 191 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 244
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 245 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 300
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 301 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 335
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 336 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 395
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ + ++H ++++PC++F+ H SLR G +H + W N+++ E
Sbjct: 396 LIQTNKLKHYRSIHG-DFSNDFRQPCVLFTGHPSLRFGDVVHFMELWGKSSLNTIIFTEP 454
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 408
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 455 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 504
>gi|148704090|gb|EDL36037.1| DNA segment, Chr 14, ERATO Doi 231, expressed, isoform CRA_b [Mus
musculus]
Length = 695
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 202/410 (49%), Gaps = 45/410 (10%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 144 MMALPYITEHTGFTGTVYATEPTMQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 198
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 199 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 252
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 253 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 308
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 309 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 343
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 344 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 403
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ + ++H ++++PC++F+ H SLR G +H + W N+++ E
Sbjct: 404 LIQTNKLKHYRSIHG-DFSNDFRQPCVLFTGHPSLRFGDVVHFMELWGKSSLNTIIFTEP 462
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 408
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 463 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 512
>gi|195126435|ref|XP_002007676.1| GI12252 [Drosophila mojavensis]
gi|193919285|gb|EDW18152.1| GI12252 [Drosophila mojavensis]
Length = 659
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 138/549 (25%), Positives = 255/549 (46%), Gaps = 65/549 (11%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
+ ML LP++T GF K+Y TE +IG+ +EEL+ +Y + + + W
Sbjct: 106 LNMLALPYITENTGFKGKVYATEPTLQIGRFFLEELV----DYIEV-SPKACTARLWK-- 158
Query: 61 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
++L LLPS L + + + + V+ +SKV + + E+ G I S
Sbjct: 159 DKLHLLPSPLSEAFRAKKWRTIFS----LKDVQGSLSKVTIMGYDEKLDILGAFIATPVS 214
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NW++S A I Y+SGS+ + H + A++ +D+++ + L+
Sbjct: 215 SGYCLGSSNWVLSTAHEKICYVSGSSTLTTHPRPINQSALKHADVLIMTGLTQA------ 268
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+V KL +C +++ GS LIP GV
Sbjct: 269 -----------------------PTVNPDTKLGELCMNVALTIRNNGSALIPCYPSGVVY 305
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
L E + +E + L +P++ IS VA+ LAY+N + EWL +Q K++ D F H
Sbjct: 306 DLFECLTQNLENAGLNNVPMFFISPVADSSLAYSNILAEWLSSAKQNKVYLPDDPFPHAF 365
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 358
++ K+ + V S ++++PC+VF H SLR G +H + W + +NS++ E
Sbjct: 366 YLRNSKLKHYNHVFSEGFSKDFRQPCVVFCGHPSLRFGDAVHFIEMWGNNPNNSIIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVS---- 413
+ + PF+P++MK C + Q+ L+K L+P +++ P+ + + H +
Sbjct: 426 DFPYLQVLAPFQPLAMKAFYCPIDTSLNYQQANKLIKELKPNVLVIPDAYTKPHPTAPNL 485
Query: 414 FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFV 473
F + + + E I +P ++ + IA+++A K R + ++++ L G L V
Sbjct: 486 FIEQPDKKIITFKCGEIIRLPLKRKLDRIYIASELAQKITAREV-AAGVSLSTLTGVLQV 544
Query: 474 NHGKHQLLP-----ENEPGGSSQTRPFLHWGSPDPENLLA----ELSKMGINGSVERCMT 524
H + P ++EPG S L+ +P E++L E + ++ ++R
Sbjct: 545 KDKVHCIQPCADSIKDEPGTSGSG---LNAVAPSKEDVLKNIKYEYGTIDVDALMKRL-- 599
Query: 525 DAESEDGFT 533
++DGF+
Sbjct: 600 ---AQDGFS 605
>gi|148704089|gb|EDL36036.1| DNA segment, Chr 14, ERATO Doi 231, expressed, isoform CRA_a [Mus
musculus]
Length = 591
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 202/410 (49%), Gaps = 45/410 (10%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 122 MMALPYITEHTGFTGTVYATEPTMQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 176
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 177 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 230
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 231 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 286
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 287 -------------------ANPDGMVGE------FCSNLALTVRNGGNVLVPCYPSGVIY 321
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 322 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 381
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ + ++H ++++PC++F+ H SLR G +H + W N+++ E
Sbjct: 382 LIQTNKLKHYRSIHG-DFSNDFRQPCVLFTGHPSLRFGDVVHFMELWGKSSLNTIIFTEP 440
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 408
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 441 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 490
>gi|194751237|ref|XP_001957933.1| GF10658 [Drosophila ananassae]
gi|190625215|gb|EDV40739.1| GF10658 [Drosophila ananassae]
Length = 655
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 137/538 (25%), Positives = 245/538 (45%), Gaps = 62/538 (11%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
+ ML LP++T GF K+Y TE +IG+ +EEL+ +Y + + + W
Sbjct: 106 LNMLALPYITENTGFKGKVYATEPTLQIGRFFLEELV----DYIEV-SPKACTARLWK-- 158
Query: 61 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
E+L LLPS L + + + + V+ +SKV + + E+ G I S
Sbjct: 159 EKLHLLPSPLSEAFRAKKWRTIFS----LKDVQGSLSKVTIMGYDEKLDILGAFIATPVS 214
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NW++S A I Y+SGS+ + H + A++ +D+++ + L+
Sbjct: 215 SGYCLGSSNWVLSTAHEKICYVSGSSTLTTHPRPINQSALKHADVLIMTGLTQA------ 268
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+V KL +C +++ GS LIP GV
Sbjct: 269 -----------------------PTVNPDTKLGELCMNVALTIRNNGSALIPCYPSGVVY 305
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
L E + +E + L +P++ IS VA+ LAY+N + EWL +Q K++ D F H
Sbjct: 306 DLFECLTQNLENAGLNNVPMFFISPVADSSLAYSNILAEWLSSAKQNKVYLPDDPFPHAF 365
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 358
++ K+ + V S ++++PC+VF H SLR G +H + W + +NS++ E
Sbjct: 366 YLRNSKLKHYNHVFSEGFSKDFRQPCVVFCGHPSLRFGDAVHFIEMWGNNPNNSIIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVSFSDV 417
+ + PF+P++MK C + Q+ L+K L+P +++ PE + + H S S++
Sbjct: 426 DFPYLQVLAPFQPLAMKAFYCPIDTSLNYQQANKLIKELKPNVLVIPEAYTKPHPSASNL 485
Query: 418 ----TSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFV 473
+ + E I +P ++ + I +++A K R + + + L G L V
Sbjct: 486 FIEQPDKKIITFKCGEIIRLPLKRKLDRIYITSELAQKISPREV-AAGVTFSTLTGVLQV 544
Query: 474 NHGKHQLLP--------ENEPGGSSQTRPFL------HWGSPDPENLLAELSKMGING 517
H + P N G++ T+ + +GS D E L+ L++ G +
Sbjct: 545 KDKVHCIQPCADSTQDDSNSTTGTAPTKEDVMKNIKYEYGSIDVEALMKRLTQDGFSN 602
>gi|26332947|dbj|BAC30191.1| unnamed protein product [Mus musculus]
Length = 576
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 202/410 (49%), Gaps = 45/410 (10%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTMQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT---- 271
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGE------FCSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 366
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ + ++H ++++PC++F+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYRSIHG-DFSNDFRQPCVLFTGHPSLRFGDVVHFMELWGKSSLNTIIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 408
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 426 DFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 475
>gi|195378833|ref|XP_002048186.1| GJ11484 [Drosophila virilis]
gi|194155344|gb|EDW70528.1| GJ11484 [Drosophila virilis]
Length = 658
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 131/502 (26%), Positives = 234/502 (46%), Gaps = 53/502 (10%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
+ ML LP++T GF K+Y TE +IG+ +EEL+ +Y + + + W
Sbjct: 106 LNMLALPYITENTGFKGKVYATEPTLQIGRFFLEELV----DYIEV-SPKACTARLWK-- 158
Query: 61 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
E+L LLPS L + + + + V+ +SKV + + E+ G I S
Sbjct: 159 EKLHLLPSPLNEAFRAKKWRTIFS----LKDVQGSLSKVTIMGYDEKLDILGAFIATPVS 214
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NW++S A I Y+SGS+ + H + A++ +D+++ + L+
Sbjct: 215 SGYCLGSSNWVLSTAHEKICYVSGSSTLTTHPRPINQSALKHADVLIMTGLTQA------ 268
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+V KL +C +++ GS LIP GV
Sbjct: 269 -----------------------PTVNPDTKLGELCMNVALTIRNNGSALIPCYPSGVVY 305
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
L E + +E + L +P++ IS VA+ LAY+N + EWL +Q K++ D F H
Sbjct: 306 DLFECLTQNLENAGLNNVPMFFISPVADSSLAYSNILAEWLSSAKQNKVYLPDDPFPHAF 365
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 358
++ K+ + V S ++++PC+VF H SLR G +H + W + +NS++ E
Sbjct: 366 YLRNSKLKHYNHVFSEGFSKDFRQPCVVFCGHPSLRFGDAVHFIEMWGNNPNNSIIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVS---- 413
+ + PF+P++MK C + Q+ L+K L+P +++ PE + + H +
Sbjct: 426 DFPYLQVLAPFQPLAMKAFYCPIDTSLNYQQANKLIKELKPNVLVIPEAYTKPHPAAANL 485
Query: 414 FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFV 473
F + + + E I +P ++ + IA+++A K R + ++++ L G L V
Sbjct: 486 FIEQPDKKIITFKCGEIIRLPLKRKLDRIYIASELAQKIMAREV-VAGVSLSTLTGVLQV 544
Query: 474 NHGKHQLLP-----ENEPGGSS 490
H + P ++EP SS
Sbjct: 545 KDKVHCIQPCADSIKDEPSTSS 566
>gi|170038752|ref|XP_001847212.1| integrator complex subunit 9 [Culex quinquefasciatus]
gi|167882458|gb|EDS45841.1| integrator complex subunit 9 [Culex quinquefasciatus]
Length = 668
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 138/546 (25%), Positives = 247/546 (45%), Gaps = 74/546 (13%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LPF+T GFS +Y TE +IG+ +EEL+ EY + E ++ W++
Sbjct: 108 MMALPFITEGTGFSGTVYATEPTLQIGRFFLEELV----EYIEASPKENTA----RMWKD 159
Query: 63 LE-LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS 121
++ LLP L + ++ L + V +++VQ + ++ G L + SS
Sbjct: 160 IQHLLPQPLNDVFKPKNWRHLFS----LDAVNKSLARVQMTGYDQKLDIFGALQVTPVSS 215
Query: 122 GLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDID 181
G +G+ NWII + I+YISGS+ + H + A++ SD+I+ + L+
Sbjct: 216 GFCLGSSNWIIVSGQEKISYISGSSTLTTHPRPINQAALKYSDVIIMAGLTQAPHV---- 271
Query: 182 QSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQ 241
N D + E+ C + +++ GGSVLIP GV
Sbjct: 272 -------------------NPDGMLGEL------CMNVVMTLRNGGSVLIPCYPSGVVYD 306
Query: 242 LLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKL 300
L E ++ ++ +IP++ IS VA+ LAY+N + EWL +Q K++ D F H L
Sbjct: 307 LFECLSSSLDNQGFSQIPMFFISPVADSSLAYSNILAEWLSTSKQNKVYIPDEPFPHANL 366
Query: 301 IKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRW-SGDHNSLLVLENE 359
+K K+ F ++S +++PC+VF H SLR G +H + W S ++++ E +
Sbjct: 367 VKNAKLKHFKHIYSEGFSTEFRQPCVVFCGHPSLRFGDAVHFVELWGSNPQHTIIFTEPD 426
Query: 360 VDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW---------RT 410
A+ P++P+++K + C + Q+ L+K L+P +++ PE + +
Sbjct: 427 FPYLQALAPYQPLAIKTVYCPIETSLNFQQANKLIKELKPGVLVIPENYTQPPPIAPHKL 486
Query: 411 HVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
+ + + + E I +P ++ + + + +A + Q + I+ L G
Sbjct: 487 DLVIDQLPDKMIIKFKRGEVIKLPLKRKRSRIYLDPQMARSLVPHEI-QPGVTISTLTGV 545
Query: 471 LFVN---HGKHQLLPENE----------------PGGSSQTRPFLH-WGSPDPENLLAEL 510
L V H H L P E P G ++ R + WG+ D L +L
Sbjct: 546 LHVKDNIHDLHPLEPTPEELAEEQQKLSKKPHLQPPGQNRLRHIKYEWGTLDVNLFLKKL 605
Query: 511 SKMGIN 516
++ GI
Sbjct: 606 AQDGIT 611
>gi|195442762|ref|XP_002069115.1| GK23916 [Drosophila willistoni]
gi|194165200|gb|EDW80101.1| GK23916 [Drosophila willistoni]
Length = 659
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 138/551 (25%), Positives = 253/551 (45%), Gaps = 69/551 (12%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
+ ML LP++T GF K+Y TE +IG+ +EEL+ +Y + + + W
Sbjct: 106 LNMLALPYITENTGFKGKVYATEPTLQIGRFFLEELV----DYIEV-SPKACTARLWK-- 158
Query: 61 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
++L +LPS L + + + + V+ +SKV + + E+ G I S
Sbjct: 159 DKLHVLPSPLSEAFRAKKWRTIFS----LKDVQGSLSKVTIMGYDEKLDILGAFIATPVS 214
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NW++S A I Y+SGS+ + H + A++ +D+++ + L+
Sbjct: 215 SGYCLGSSNWVLSTAHEKICYVSGSSTLTTHPRPINQSALKHADVLIMTGLTQA------ 268
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+V KL +C +++ GS LIP GV
Sbjct: 269 -----------------------PTVNPDTKLGELCMNVALTIRNNGSALIPCYPSGVVY 305
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
L E + +E + L +P++ IS VA+ LAY+N + EWL +Q K++ D F H
Sbjct: 306 DLFECLTQNLENAGLNNVPMFFISPVADSSLAYSNILAEWLSSAKQNKVYLPDDPFPHAF 365
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 358
++ K+ + V S ++++PC+VF H SLR G +H + W + +NS++ E
Sbjct: 366 YLRNSKLKHYNHVFSEGFSKDFRQPCVVFCGHPSLRFGDAVHFIEMWGNNPNNSIIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVS---- 413
+ + PF+P++MK C + Q+ L+K L+P +++ PE + + H S
Sbjct: 426 DFPYLQVLAPFQPLAMKAFYCPIDTSLNYQQANKLIKELKPNVLVIPEAYTKPHPSAPNL 485
Query: 414 FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFV 473
F + + + E I +P ++ + I +++A K R + + ++ L G L V
Sbjct: 486 FIEQPDKKIITFKCGEIIRLPLKRKLDRIYITSELAQKISPREVTS-GVTLSTLTGVLQV 544
Query: 474 NHGKHQLLP-----ENEPGGSSQTRPFLHWGSPDP------ENLLAELSKMGINGSVERC 522
H + P +++P GSS + +P P +N+ E + ++ ++R
Sbjct: 545 KDKVHCIQPCADFVKDDPTGSSSS-----GTAPAPSKEEVLKNVKYEYGTIDVDVLMKRL 599
Query: 523 MTDAESEDGFT 533
++DGFT
Sbjct: 600 -----AQDGFT 605
>gi|340719906|ref|XP_003398385.1| PREDICTED: integrator complex subunit 9-like [Bombus terrestris]
Length = 661
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 143/591 (24%), Positives = 272/591 (46%), Gaps = 78/591 (13%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMK-WE 61
ML LPF+T GF IY TE +IG+ MEEL+ E+ E++ K W+
Sbjct: 109 MLALPFITEDTGFKGIIYATEPTLQIGRFFMEELV----EF-----IEQTPKATLAKHWK 159
Query: 62 E-LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
E L +LPS L + + I+ V +S +QT+ + ++ G L + S
Sbjct: 160 EMLHVLPSPLADALKPKSWKHIYS----ISAVNTALSYIQTVGYDQKLDIYGALTVTPIS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NW+IS +A++SGS+ + H + ++ +++++ + L+ +
Sbjct: 216 SGYCLGSSNWLISCDHEKVAFVSGSSTLTTHPRPMEQATLKHANMLILTGLTQTPT---- 271
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D + E+ C +++ GG VLIP GV
Sbjct: 272 -------------------ANPDTMLGEL------CMTVAITLRTGGCVLIPCYPSGVVY 306
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
L E ++ ++ S ++P++ IS VAE LAY+N + EWL +Q K++ + F H
Sbjct: 307 DLFECLSTHLDKSGFSQVPLFFISPVAETSLAYSNILAEWLSTNKQNKVYLPEEPFPHAF 366
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 358
L+K ++ F ++++ ++++PC+VF H SLR G +H ++ W + ++++ E
Sbjct: 367 LVKNARLKHFTSIYAEGFSSDYRQPCVVFCGHPSLRFGDAVHFVQLWGNNPQHTIIFTEP 426
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW---------R 409
+ A+ PF+P++MK + C + + L++ L+P+ ++ PE + R
Sbjct: 427 DFPYLDALAPFQPLAMKAVHCPIDTSLNFTQANKLIRDLKPEHLVIPECYTQPPITAPHR 486
Query: 410 THVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKG 469
T + V + + E I +P ++ + I ++A ++ L++ + G
Sbjct: 487 TDLVIEPVGEKPLITFKRGEVIKLPLKRKKGRVFIEPELAGNIIPNEIR-PGLSLASVTG 545
Query: 470 RLFVNHGKHQLLP-ENEPGG-----SSQTRPFL---------HWGSPDPENLLAELSKMG 514
L V + + E+ P G SS P +G+ DP+ LL +L++ G
Sbjct: 546 ELEVKDNVYTIKSIEDRPSGKRKASSSSPAPIKEEVLKERRHEYGNLDPQELLQKLNQEG 605
Query: 515 INGSVERCMTDAESEDGFTVKVQDPEKSMIEVRAAVT-VISAADKNLASRI 564
I G+ + S ++ +QD E ++I++ T + D+ + R+
Sbjct: 606 IQGAKLQ-----HSPTATSIHLQD-EDTLIQIGDNSTHIFCNGDQKIRRRL 650
>gi|194873287|ref|XP_001973177.1| GG13497 [Drosophila erecta]
gi|190654960|gb|EDV52203.1| GG13497 [Drosophila erecta]
Length = 654
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 226/489 (46%), Gaps = 48/489 (9%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
+ ML LP++T GF K+Y TE +IG+ +EEL+ +Y + + + W
Sbjct: 106 LNMLALPYITENTGFKGKVYATEPTLQIGRFFLEELV----DYIEV-SPKACTARLWK-- 158
Query: 61 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
E+L LLPS L + + + + V+ +SKV + + E+ G I S
Sbjct: 159 EKLHLLPSPLSEAFRAKKWRTIFS----LKDVQGSLSKVTIMGYDEKLDILGAFIATPVS 214
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NW++S A I Y+SGS+ + H + A++ +D+++ + L+
Sbjct: 215 SGYCLGSSNWVLSTAHEKICYVSGSSTLTTHPRPINQSALKHADVLIMTGLTQA------ 268
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+V KL +C +++ GS LIP GV
Sbjct: 269 -----------------------PTVNPDTKLGELCMNVALTIRNNGSALIPCYPSGVVY 305
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
L E + +E + L +P++ IS VA+ LAY+N + EWL +Q K++ D F H
Sbjct: 306 DLFECLTQNLENAGLNNVPMFFISPVADSSLAYSNILAEWLSSAKQNKVYIPDDPFPHAF 365
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 358
++ K+ + V S ++++PC+VFS H SLR G +H + W + +NS++ E
Sbjct: 366 YLRNNKLKHYNHVFSEGFSKDFRQPCVVFSGHPSLRFGDAVHFIEMWGNNPNNSIIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVS---- 413
+ + PF+P++MK C + Q+ L+K L+P +++ PE + + H S
Sbjct: 426 DFPYLQVLAPFQPLAMKAFYCPIDTSLNYQQANKLIKELKPNVLVIPEAYTKPHPSAPNL 485
Query: 414 FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFV 473
F + + + E I +P ++ + I +++A K + + + + L G L V
Sbjct: 486 FIEQPDKKIITFKCGEIIRLPLKRKLDRIYITSELAQKISPKEV-AAGVTFSTLTGVLQV 544
Query: 474 NHGKHQLLP 482
H + P
Sbjct: 545 KDKVHCIQP 553
>gi|116267933|ref|NP_001070738.1| integrator complex subunit 9 [Danio rerio]
gi|115528209|gb|AAI24794.1| Zgc:154012 [Danio rerio]
Length = 658
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 201/410 (49%), Gaps = 45/410 (10%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ + + A W E
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTLQIGRLLMEELVAFMERVPKAHAAS-----CWKNKEI 161
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLP L+ D E+ C + V +SKVQ + + ++ G + + S
Sbjct: 162 QRLLPGPLK------DAVEVWSWSKCYSLQEVNSALSKVQLVGYSQKVELFGAVQVTPLS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H + +++ SD+++ + L+ + +
Sbjct: 216 SGYSLGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMEQSSLKNSDVLILTGLTQIPT---- 271
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D + E CS +V+AGG+VL+P GV
Sbjct: 272 -------------------ANPDGMLGEF------CSNLAMTVRAGGNVLVPCYSSGVIY 306
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + FM+ ++L P Y IS VA L ++ EWLC+ +Q K++ +P F H +
Sbjct: 307 DLLECLYQFMDSANLGTTPFYFISPVANSSLEFSQIFAEWLCQNKQSKVYLPEPPFPHAE 366
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H +++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSSEFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTIIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 408
+ A+ P++P++MK + C + +V LLK +QP V+ PE +
Sbjct: 426 DFSYLDALAPYQPLAMKCVYCPIDTRLNFHQVSKLLKDIQPLHVVCPEPY 475
>gi|350408420|ref|XP_003488398.1| PREDICTED: integrator complex subunit 9-like isoform 2 [Bombus
impatiens]
Length = 661
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 142/591 (24%), Positives = 271/591 (45%), Gaps = 78/591 (13%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMK-WE 61
ML LPF+T GF IY TE +IG+ MEEL+ E+ E++ K W+
Sbjct: 109 MLALPFITEDTGFKGIIYATEPTLQIGRFFMEELV----EF-----IEQTPKATLAKHWK 159
Query: 62 E-LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
E L +LP L + + I+ V +S +QT+ + ++ G L + S
Sbjct: 160 EMLHVLPPPLADALKPKSWKHIYS----ISAVNTSLSYIQTVGYDQKLDIYGALTVTPIS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NW+IS +A++SGS+ + H + ++ +++++ + L+ +
Sbjct: 216 SGYCLGSSNWLISCDHEKVAFVSGSSTLTTHPRPMEQATLKHANMLILTGLTQTPT---- 271
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D + E+ C +++ GG VLIP GV
Sbjct: 272 -------------------ANPDTMLGEL------CMTVAITLRTGGCVLIPCYPSGVVY 306
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
L E ++ ++ S ++P++ IS VAE LAY+N + EWL +Q K++ + F H
Sbjct: 307 DLFECLSTHLDKSGFSQVPLFFISPVAETSLAYSNILAEWLSTNKQNKVYLPEEPFPHAF 366
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 358
L+K ++ F ++++ ++++PC+VF H SLR G +H ++ W + ++++ E
Sbjct: 367 LVKNARLKHFTSIYAEGFSSDYRQPCVVFCGHPSLRFGDAVHFVQLWGNNPQHTIIFTEP 426
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW---------R 409
+ A+ PF+P++MK + C + + L++ L+P+ ++ PE + R
Sbjct: 427 DFPYLDALAPFQPLAMKAVHCPIDTSLNFTQANKLIRDLKPEHLVIPECYTQPPITAPHR 486
Query: 410 THVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKG 469
T + V + + E I +P ++ + I ++A ++ L++ + G
Sbjct: 487 TDLVIEPVGEKPLITFKRGEVIKLPLKRKKGRVFIEPELAGNIIPNEIR-PGLSLASVTG 545
Query: 470 RLFVNHGKHQLLP-ENEPGG-----SSQTRPFL---------HWGSPDPENLLAELSKMG 514
L V + + E+ P G SS P +G+ DP+ LL +L++ G
Sbjct: 546 ELEVKDNVYTIKSIEDRPSGKRKASSSSPAPIKEEVLKERKHEYGNLDPQELLQKLNQEG 605
Query: 515 INGSVERCMTDAESEDGFTVKVQDPEKSMIEVRAAVT-VISAADKNLASRI 564
I G+ + S ++ +QD E ++I++ T + D+ + R+
Sbjct: 606 IQGAKLQ-----HSPTATSIHLQD-EDTLIQIGDNSTHIFCNGDQKIRRRL 650
>gi|332025996|gb|EGI66149.1| Integrator complex subunit 9 [Acromyrmex echinatior]
Length = 638
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 138/589 (23%), Positives = 271/589 (46%), Gaps = 74/589 (12%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
ML LPF+T GF IY TE +IG+ MEEL+ E+ + + + W +
Sbjct: 86 MLALPFITEGTGFKGIIYATEPTLQIGRFFMEELV----EFIE-RTPKATMAKHWK--DM 138
Query: 63 LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSG 122
L LPS L ++ + + + V +S +Q + + ++ G L + SSG
Sbjct: 139 LHTLPSPLAEVVKPKTWKHIYS----MTAVNSALSNIQMVGYDQKLDIYGALTVTPISSG 194
Query: 123 LDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQ 182
+G+ NW+IS +A++SGS+ + H D ++ ++L++ + L+ +
Sbjct: 195 FCLGSSNWLISSDHEKVAFVSGSSTLTTHPKPMDQVTLKHANLLILTGLTQTPT------ 248
Query: 183 SSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQL 242
+N D + E+ C +++AGG VLIP GV L
Sbjct: 249 -----------------ANPDTMLGEL------CMTVAVTLRAGGCVLIPCYPSGVVYDL 285
Query: 243 LEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLI 301
E ++ ++ S ++P++ IS VAE LAY+N + EWL +Q K++ + F H L+
Sbjct: 286 FECLSTHLDKSGFTQVPLFFISPVAETSLAYSNILAEWLSTNKQNKVYLPEEPFPHAFLV 345
Query: 302 KEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLENEV 360
K ++ + + ++ ++++PC+VF H SLR G +H ++ W G+ ++++ E +
Sbjct: 346 KNARLKHYTSTYAEGFSNDYRQPCVVFCGHPSLRFGDAVHFVQLWGGNPLHTVIFTEPDF 405
Query: 361 DAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW---------RTH 411
A+ PF+P+SMK + C + + L++ L+P+ ++ PE + RT
Sbjct: 406 PYLEALAPFQPLSMKAVHCPIDTSLNFTQANKLIRDLKPEHLVIPEVYTQPPGMAPHRTD 465
Query: 412 VSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRL 471
+ + + + E I +P ++ + I ++AS ++ L++ + G L
Sbjct: 466 LVIESIGEKPLITFKRGEVIKLPLKRKKGRVFIEPELASNIVPSEVR-PGLSLASVTGEL 524
Query: 472 FVNHGKHQLLP-ENEPGGSSQTR-----PFL---------HWGSPDPENLLAELSKMGIN 516
V + + E++ G + P + +G+ DP+ LL +L++ G +
Sbjct: 525 DVKDNVYTIKNIEDKLSGKRKMSLGSPAPIMEEVLKERKHEYGNLDPQELLQKLNQEGFH 584
Query: 517 GSVERCMTDAESEDGFTVKVQDPEKSMIEVRAAVT-VISAADKNLASRI 564
G+ + S ++ +QD E ++I++ T + D+ + R+
Sbjct: 585 GAKLQ-----HSPTSTSIHLQD-EDTLIQIGDNSTHIFCNGDQKIRKRL 627
>gi|410916073|ref|XP_003971511.1| PREDICTED: integrator complex subunit 9-like [Takifugu rubripes]
Length = 657
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 203/410 (49%), Gaps = 45/410 (10%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W E
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTLQIGRLLMEELV--NFMERV---PKAQSATCWKNKEI 161
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
+LP +L+ D ++ C + V +S+VQ + + ++ G + + S
Sbjct: 162 QRMLPGSLK------DAVDVWTWKRCYSMQEVNSALSRVQLVGYSQKVELFGAVQVSPLS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYSLGSSNWIIQSHHEKVSYVSGSSLLTTHPQPMDQSSLKNSDVLILTGLTQMPT---- 271
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D + E CS +++AGG+VL+P GV
Sbjct: 272 -------------------ANPDGMLGE------FCSNLAMTIRAGGNVLVPCYSSGVIY 306
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + F+E +SL P Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQFIESASLGTTPFYFISPVANSSLEFSQIFAEWLCNNKQSKVYLPEPPFPHAE 366
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H +++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSSEFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTIIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 408
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 426 DFSYLDALAPYQPLAMKCVYCPIDTRLNFHQVSKLLKEVQPLHVVCPEQY 475
>gi|432945663|ref|XP_004083710.1| PREDICTED: integrator complex subunit 9-like [Oryzias latipes]
Length = 656
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 203/410 (49%), Gaps = 45/410 (10%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTLQIGRLLMEELV--NFMERV---PKAQSATSWKNKDM 161
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLP L+ D ++ C I V +S+VQ + + ++ G + + S
Sbjct: 162 QRLLPGPLK------DAVDVWTWKRCYGIQEVNSALSRVQLVGYSQKVELFGAVQVSPLS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII +AY+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYSLGSSNWIIQSHHEKVAYVSGSSLLTTHPQPMDQSSLKNSDVLILTGLTQMPT---- 271
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D + E CS +++AGG+VL+P GV
Sbjct: 272 -------------------ANPDGMLGE------FCSNLAMTIRAGGNVLVPCYSSGVIY 306
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + F++ ++L P Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQFIDSANLGTTPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 366
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSSDFRQPCVVFTGHPSLRFGDVVHFMELWGKSGLNTIIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 408
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 426 DFSYLDALAPYQPLAMKCVYCPIDTRLNFHQVAKLLKEVQPLHVVCPEQY 475
>gi|28574894|ref|NP_648838.3| integrator 9 [Drosophila melanogaster]
gi|16184460|gb|AAL13803.1| LD26912p [Drosophila melanogaster]
gi|28380509|gb|AAF49538.2| integrator 9 [Drosophila melanogaster]
gi|220945816|gb|ACL85451.1| CG5222-PA [synthetic construct]
gi|220955566|gb|ACL90326.1| CG5222-PA [synthetic construct]
Length = 654
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/489 (25%), Positives = 225/489 (46%), Gaps = 48/489 (9%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
+ ML LP++T GF K+Y TE +IG+ +EEL+ +Y + + + W
Sbjct: 106 LNMLALPYITENTGFKGKVYATEPTLQIGRFFLEELV----DYIEV-SPKACTARLWK-- 158
Query: 61 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
E+L LLPS L + + + + V+ +SKV + + E+ G I S
Sbjct: 159 EKLHLLPSPLSEAFRAKKWRTIFS----LKDVQGSLSKVTIMGYDEKLDILGAFIATPVS 214
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NW++S A I Y+SGS+ + H + A++ +D+++ + L+
Sbjct: 215 SGYCLGSSNWVLSTAHEKICYVSGSSTLTTHPRPINQSALKHADVLIMTGLTQA------ 268
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+V KL +C +++ GS LIP GV
Sbjct: 269 -----------------------PTVNPDTKLGELCMNVALTIRNNGSALIPCYPSGVVY 305
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
L E + +E + L +P++ IS VA+ LAY+N + EWL +Q K++ D F H
Sbjct: 306 DLFECLTQNLENAGLNNVPMFFISPVADSSLAYSNILAEWLSSAKQNKVYLPDDPFPHAF 365
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 358
++ K+ + V S ++++PC+VF H SLR G +H + W + +NS++ E
Sbjct: 366 YLRNNKLKHYNHVFSEGFSKDFRQPCVVFCGHPSLRFGDAVHFIEMWGNNPNNSIIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVS---- 413
+ + PF+P++MK C + Q+ L+K L+P +++ PE + + H S
Sbjct: 426 DFPYLQVLAPFQPLAMKAFYCPIDTSLNYQQANKLIKELKPNVLVIPEAYTKPHPSAPNL 485
Query: 414 FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFV 473
F + + + E I +P ++ + I +++A K + + + + L G L V
Sbjct: 486 FIEQPDKKIITFKCGEIIRLPLKRKLDRIYITSELAQKISPKEV-AAGVTFSTLTGVLQV 544
Query: 474 NHGKHQLLP 482
H + P
Sbjct: 545 KDKVHCIQP 553
>gi|443696476|gb|ELT97170.1| hypothetical protein CAPTEDRAFT_153905 [Capitella teleta]
Length = 656
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 146/593 (24%), Positives = 266/593 (44%), Gaps = 64/593 (10%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWE- 61
M+ LPFLT F +Y TE +G+L MEEL+ +Y Q +++ + KW+
Sbjct: 108 MMALPFLTEYTNFRGVVYATEPTLHLGRLYMEELV----DYIQQCPSQKRAS----KWKR 159
Query: 62 ELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS 121
+L LP LR+ + ++ + ++K+ + F E G L SS
Sbjct: 160 QLNYLPPPLREAIRPSEWRQIYSK----HDIDSSLAKICCVGFNEIKDIFGALKATPVSS 215
Query: 122 GLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDID 181
G IG+CNWI++ I+Y+SG++ + H + ++ SD+++ S L+ +
Sbjct: 216 GYAIGSCNWILTSHHHKISYLSGTSTLTTHPRPMEKSPLKDSDILIMSSLTQI------- 268
Query: 182 QSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQ 241
++N D + E C A ++K GG+VL+P G+
Sbjct: 269 ----------------PMANPDVKIGEF------CVNAATTLKNGGNVLVPCYPSGITYD 306
Query: 242 LLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKL 300
L E ++ ++ L +P+Y IS VA LAY+N EWL +Q K++ +P F H +L
Sbjct: 307 LFECLSSHLDTIGLGGVPLYFISPVAASSLAYSNIYAEWLSSGKQSKVYLPEPPFPHAEL 366
Query: 301 IKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRW-SGDHNSLLVLENE 359
I+ ++ +P +H + PCIVF+ H SLR G +H L W N+++ E +
Sbjct: 367 IRSNRLKHYPGLHE-GFNKEIRSPCIVFTGHPSLRFGNVVHFLEIWGKSSSNTIIFTEPD 425
Query: 360 VDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRT-HVSFSDVT 418
A+ P +P+ MKV C + + L++ L P+ ++ P+++ V T
Sbjct: 426 FGYLEALAPHQPLHMKVSYCPIDTSLSFSQANKLIRELHPQHIVTPDQYTAPPVMMPHCT 485
Query: 419 SFSVS------HYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLF 472
+ + + E + +P +E +L++ +A + ++ L + L G L
Sbjct: 486 DLVIDPEYHPLTFKKAEVLTLPIKREFEQLDLDPQLAESLRPTEVR-PGLAVAMLSGSLV 544
Query: 473 VNHGKHQLLPENEPGG-----SSQTRPF-LHWGSPDPENLLAELSKMGINGSV-ERCMTD 525
+L P P S +T+P L P L L + S+ ++ + D
Sbjct: 545 SRDNHFKLTPAFNPVDNPLHFSEETKPSPLVKPVTSPTYLWGNLDVFELRDSLHQKGLMD 604
Query: 526 AESE---DGFTVKVQDPEKSMIEVRAAVTVISAADKNLASRIVKAMENILEGI 575
A+ E +GF + + E ++I++ T I +++ L ++I +++ L I
Sbjct: 605 AKVENVPNGFIIHIPS-EDTLIQIDQTSTHIMCSNEILRNKIKESLIKCLAKI 656
>gi|195327963|ref|XP_002030686.1| GM24446 [Drosophila sechellia]
gi|194119629|gb|EDW41672.1| GM24446 [Drosophila sechellia]
Length = 654
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/489 (25%), Positives = 225/489 (46%), Gaps = 48/489 (9%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
+ ML LP++T GF K+Y TE +IG+ +EEL+ +Y + + + W
Sbjct: 106 LNMLALPYITENTGFKGKVYATEPTLQIGRFFLEELV----DYIEV-SPKACTACLWK-- 158
Query: 61 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
E+L LLPS L + + + + V+ +SKV + + E+ G I S
Sbjct: 159 EKLHLLPSPLSEAFRAKKWRTIFS----LKDVQGSLSKVTIMGYDEKLDILGAFIATPVS 214
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NW++S A I Y+SGS+ + H + A++ +D+++ + L+
Sbjct: 215 SGYCLGSSNWVLSTAHEKICYVSGSSTLTTHPRPINQSALKHADVLIMTGLTQA------ 268
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+V KL +C +++ GS LIP GV
Sbjct: 269 -----------------------PTVNPDTKLGELCMNVALTIRNNGSALIPCYPSGVVY 305
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
L E + +E + L +P++ IS VA+ LAY+N + EWL +Q K++ D F H
Sbjct: 306 DLFECLTQNLENAGLNNVPMFFISPVADSSLAYSNILAEWLSSAKQNKVYLPDDPFPHAF 365
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 358
++ K+ + V S ++++PC+VF H SLR G +H + W + +NS++ E
Sbjct: 366 YLRNNKLKHYNHVFSEGFSKDFRQPCVVFCGHPSLRFGDAVHFIEMWGNNPNNSIIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVS---- 413
+ + PF+P++MK C + Q+ L+K L+P +++ PE + + H S
Sbjct: 426 DFPYLQVLAPFQPLAMKAFYCPIDTSLNYQQANKLIKELKPNVLVIPEAYTKPHPSAPNL 485
Query: 414 FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFV 473
F + + + E I +P ++ + I +++A K + + + + L G L V
Sbjct: 486 FIEQPDKKIITFKCGEIIRLPLKRKLDRIYITSELAQKISPKEV-AAGVTFSTLTGVLQV 544
Query: 474 NHGKHQLLP 482
H + P
Sbjct: 545 KDKVHCIQP 553
>gi|348506398|ref|XP_003440746.1| PREDICTED: integrator complex subunit 9-like [Oreochromis
niloticus]
Length = 657
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 202/410 (49%), Gaps = 45/410 (10%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W E
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTLQIGRLLMEELV--NFMERV---PKAQSATSWKNKEI 161
Query: 63 LELLPSALRKIALGEDGSE--LGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
+LP L+ D + + C + V +SKVQ + + ++ G + + S
Sbjct: 162 QRMLPGPLK------DAVDVWMWKRCYSMQEVNSALSKVQLVGYSQKVELFGAVQVSPLS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYSLGSSNWIIQSHHEKVSYVSGSSLLTTHPQPMDQSSLKNSDVLILTGLTQMPT---- 271
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D + E CS +++AGG+VL+P GV
Sbjct: 272 -------------------ANPDGMLGEF------CSNLAMTIRAGGNVLVPCYSSGVIY 306
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + F+E ++L P Y IS +A L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQFIESANLGTTPFYFISPIANSSLEFSQIFAEWLCHNKQTKVYLPEPPFPHAE 366
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
LI+ K+ +P++H +++PC+VF+ H SLR G +H + W N+++ E
Sbjct: 367 LIQTNKLKHYPSIHG-DFSSEFRQPCVVFTGHPSLRFGDVVHFMELWGKSSLNTIIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 408
+ A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 426 DFSYLDALAPYQPLAMKCVYCPIDTRLNFHQVSKLLKEVQPLHVVCPEQY 475
>gi|195590647|ref|XP_002085056.1| GD12515 [Drosophila simulans]
gi|194197065|gb|EDX10641.1| GD12515 [Drosophila simulans]
Length = 654
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/489 (25%), Positives = 225/489 (46%), Gaps = 48/489 (9%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
+ ML LP++T GF K+Y TE +IG+ +EEL+ +Y + + + W
Sbjct: 106 LNMLALPYITENTGFKGKVYATEPTLQIGRFFLEELV----DYIEV-SPKACTARLWK-- 158
Query: 61 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
E+L LLPS L + + + + V+ +SKV + + E+ G I S
Sbjct: 159 EKLHLLPSPLSEAFRAKKWRTIFS----LKDVQGSLSKVTIMGYDEKLDILGAFIATPVS 214
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NW++S A I Y+SGS+ + H + A++ +D+++ + L+
Sbjct: 215 SGYCLGSSNWVLSTAHEKICYVSGSSTLTTHPRPINQSALKHADVLIMTGLTQA------ 268
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+V KL +C +++ GS LIP GV
Sbjct: 269 -----------------------PTVNPDTKLGELCMNVALTIRNNGSALIPCYPSGVVY 305
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
L E + +E + L +P++ IS VA+ LAY+N + EWL +Q K++ D F H
Sbjct: 306 DLFECLTQNLENAGLNNVPMFFISPVADSSLAYSNILAEWLSSAKQNKVYLPDDPFPHAF 365
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 358
++ K+ + V S ++++PC+VF H SLR G +H + W + +NS++ E
Sbjct: 366 YLRNNKLKHYNHVFSEGFSKDFRQPCVVFCGHPSLRFGDAVHFIEMWGNNPNNSIIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVS---- 413
+ + PF+P++MK C + Q+ L+K L+P +++ PE + + H S
Sbjct: 426 DFPYLQVLAPFQPLAMKAFYCPIDTSLNYQQANKLIKELKPNVLVIPEAYTKPHPSAPNL 485
Query: 414 FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFV 473
F + + + E I +P ++ + I +++A K + + + + L G L V
Sbjct: 486 FIEQPDKKIITFKCGEIIRLPLKRKLDRIYITSELAQKISPKEV-AAGVTFSTLTGVLQV 544
Query: 474 NHGKHQLLP 482
H + P
Sbjct: 545 KDKVHCIQP 553
>gi|195478621|ref|XP_002086517.1| GE22809 [Drosophila yakuba]
gi|194186307|gb|EDW99918.1| GE22809 [Drosophila yakuba]
Length = 654
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/489 (25%), Positives = 225/489 (46%), Gaps = 48/489 (9%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
+ ML LP++T GF K+Y TE +IG+ +EEL+ +Y + + + W
Sbjct: 106 LNMLALPYITENTGFKGKVYATEPTLQIGRFFLEELV----DYIEV-SPKACTARLWK-- 158
Query: 61 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
E+L LLPS L + + + + V+ +SKV + + E+ G I S
Sbjct: 159 EKLHLLPSPLSEAFRAKKWRTIFS----LKDVQGSLSKVTIMGYDEKLDILGAFIATPVS 214
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NW++S A I Y+SGS+ + H + A++ +D+++ + L+
Sbjct: 215 SGYCLGSSNWVLSTAHEKICYVSGSSTLTTHPRPINQSALRHADVLIMTGLTQA------ 268
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+V KL +C +++ GS LIP GV
Sbjct: 269 -----------------------PTVNPDTKLGELCMNVALTIRNNGSALIPCYPSGVVY 305
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
L E + +E + L +P++ IS VA+ LAY+N + EWL +Q K++ D F H
Sbjct: 306 DLFECLTQNLENAGLNNVPMFFISPVADSSLAYSNILAEWLSSAKQNKVYLPDDPFPHAF 365
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 358
++ K+ + V S ++++PC+VF H SLR G +H + W + +NS++ E
Sbjct: 366 YLRNNKLKHYNHVFSEGFSKDFRQPCVVFCGHPSLRFGDAVHFIEMWGNNPNNSIIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVS---- 413
+ + PF+P++MK C + Q+ L+K L+P +++ PE + + H S
Sbjct: 426 DFPYLQVLAPFQPLAMKAFYCPIDTSLNYQQANKLIKELKPNVLVIPEAYTKPHPSAPNL 485
Query: 414 FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFV 473
F + + + E I +P ++ + I +++A K + + + + L G L V
Sbjct: 486 FIEQPDKKIITFKCGEIIRLPLKRKLDRIYITSELAQKISPKEV-AAGVTFSTLTGVLQV 544
Query: 474 NHGKHQLLP 482
H + P
Sbjct: 545 KDKVHCIQP 553
>gi|195495401|ref|XP_002095251.1| GE19796 [Drosophila yakuba]
gi|194181352|gb|EDW94963.1| GE19796 [Drosophila yakuba]
Length = 654
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/489 (25%), Positives = 225/489 (46%), Gaps = 48/489 (9%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
+ ML LP++T GF K+Y TE +IG+ +EEL+ +Y + + + W
Sbjct: 106 LNMLALPYITENTGFKGKVYATEPTLQIGRFFLEELV----DYIEV-SPKACTARLWK-- 158
Query: 61 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
E+L LLPS L + + + + V+ +SKV + + E+ G I S
Sbjct: 159 EKLHLLPSPLSEAFRAKKWRTIFS----LKDVQGSLSKVTIMGYDEKLDILGAFIATPVS 214
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NW++S A I Y+SGS+ + H + A++ +D+++ + L+
Sbjct: 215 SGYCLGSSNWVLSTAHEKICYVSGSSTLTTHPRPINQSALKHADVLIMTGLTQA------ 268
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+V KL +C +++ GS LIP GV
Sbjct: 269 -----------------------PTVNPDTKLGELCMNVALTIRNNGSALIPCYPSGVVY 305
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
L E + +E + L +P++ IS VA+ LAY+N + EWL +Q K++ D F H
Sbjct: 306 DLFECLTQNLENAGLNNVPMFFISPVADSSLAYSNILAEWLSSAKQNKVYLPDDPFPHAF 365
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 358
++ K+ + V S ++++PC+VF H SLR G +H + W + +NS++ E
Sbjct: 366 YLRNNKLKHYNHVFSEGFSKDFRQPCVVFCGHPSLRFGDAVHFIEMWGNNPNNSIIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVS---- 413
+ + PF+P++MK C + Q+ L+K L+P +++ PE + + H S
Sbjct: 426 DFPYLQVLAPFQPLAMKAFYCPIDTSLNYQQANKLIKELKPNVLVIPEAYTKPHPSAPNL 485
Query: 414 FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFV 473
F + + + E I +P ++ + I +++A K + + + + L G L V
Sbjct: 486 FIEQPDKKIITFKCGEIIRLPLKRKLDRIYITSELAQKISPKEV-AAGVTFSTLTGVLQV 544
Query: 474 NHGKHQLLP 482
H + P
Sbjct: 545 KDKVHCIQP 553
>gi|345498046|ref|XP_003428131.1| PREDICTED: LOW QUALITY PROTEIN: integrator complex subunit 9-like
[Nasonia vitripennis]
Length = 662
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/546 (24%), Positives = 245/546 (44%), Gaps = 73/546 (13%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
ML LPF+T GF IY TE +IG+ MEEL+ EY + ++ W E
Sbjct: 109 MLALPFITEGTGFKGAIYATEPTLQIGRFFMEELV----EYIE-QAPRDTMARHWK--EM 161
Query: 63 LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSG 122
L +LP L + + +A V ++ +Q + + ++ G L + SSG
Sbjct: 162 LHVLPPPLSDCLKPKSWKHIYS----MAAVNSALANIQLVGYDQKLDIFGALAVTPISSG 217
Query: 123 LDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQ 182
+G+ NW+IS +AY+SGS+ + H + ++ ++L++ + L+ + +
Sbjct: 218 YCLGSSNWLISSDHEKVAYVSGSSTLTTHPRPMEQTTLKHANLLILTGLAQMPA------ 271
Query: 183 SSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQL 242
+N D + E+ C ++++GG VLIP GV L
Sbjct: 272 -----------------ANPDTMLGEL------CMTVAMTLRSGGCVLIPCYPSGVVYDL 308
Query: 243 LEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLI 301
E ++ ++ S ++P++ IS VAE LAY+N + EWL +Q K++ + F H L+
Sbjct: 309 FECLSSHLDKSGFAQVPLFFISPVAETSLAYSNILAEWLSTNKQNKVYLPEEPFPHAFLV 368
Query: 302 KEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRW-SGDHNSLLVLENEV 360
K ++ F + ++ ++++PC+VF H SLR G +H ++ W + ++++ E +
Sbjct: 369 KNARLKYFTSTYAEGFSTDYRQPCVVFCGHPSLRFGDAVHFIQMWGNSPQHTIIFTEPDF 428
Query: 361 DAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW---------RTH 411
A+ PF+P++MK + C + + L++ L+P ++ PE + R
Sbjct: 429 PYIEALAPFQPLAMKAVHCPIDTSLNFTQANKLIRDLKPDNLVIPERYMQPPMTAPHRAD 488
Query: 412 VSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRL 471
+ V + + E I +P + + I ++A ++ L++ + G L
Sbjct: 489 LVIEPVGEKPLITFKRGEVIKLPLKRRRGRIFIEPELADNIIPSEIR-PGLSLASVSGEL 547
Query: 472 FVNHGKHQLLPENEP----------GGSSQTRPFL---------HWGSPDPENLLAELSK 512
V + + +N P G SS P +G+ DP+ LL +L +
Sbjct: 548 EVKDNVYTI--KNIPSRSNGDRKRKGSSSNPVPVKEELMKERKHEYGNLDPQELLQKLIQ 605
Query: 513 MGINGS 518
GI G+
Sbjct: 606 EGITGA 611
>gi|118786554|ref|XP_556128.2| AGAP005494-PA [Anopheles gambiae str. PEST]
gi|116126379|gb|EAL39840.2| AGAP005494-PA [Anopheles gambiae str. PEST]
Length = 665
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 137/564 (24%), Positives = 251/564 (44%), Gaps = 77/564 (13%)
Query: 2 GMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWE 61
ML LP++T GF ++Y TE +IG+ +EEL+ EY + E ++ W+
Sbjct: 109 NMLALPYITEGTGFCGEVYATEPTLQIGRFFLEELV----EYIEASPKESTA----RMWK 160
Query: 62 ELE-LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
E++ LP L + ++ L + V +++V+ + ++ G L + S
Sbjct: 161 EIQHQLPMPLNDVFKPKNWRHLFS----MDAVNKSLARVRMTGYDQKLDIFGALQVTPIS 216
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NW I + I+YISGS+ + H + A++ SD+++ + L+
Sbjct: 217 SGFCLGSSNWTIVSGQEKISYISGSSTLTTHPRPINQTALKYSDVVIMTGLTQAPHV--- 273
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
N D + E+ C + +++ GGSVLIP GV
Sbjct: 274 --------------------NPDAMLGEL------CMNVMMTLRNGGSVLIPCYPSGVVY 307
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
L E +++ ++ +IP++ IS VA+ LAY+N + EWL +Q K++ D F H
Sbjct: 308 DLFECLSVSLDNQGFTQIPMFFISPVADSSLAYSNILAEWLSTSKQNKVYIPDEPFPHAS 367
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRW-SGDHNSLLVLEN 358
L+K K+ F + S +++PC+VF H SLR G +H + W S ++++ E
Sbjct: 368 LVKNAKLKHFKHIDSEGFSTEFRQPCVVFCGHPSLRFGDAVHFVELWGSNPLHTIIFTEP 427
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW---------R 409
+ A+ P++P+++K + C + Q+ L+K L+P +++ PE + +
Sbjct: 428 DFPHMQALAPYQPLAIKTVYCPIETSLNFQQANKLIKELKPGVLVIPENYTQPPAIAPQK 487
Query: 410 THVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKG 469
+ + + + E I +P ++ + + +A + + Q + ++ + G
Sbjct: 488 LDLVIDPIPDKMIIKFKRGEVIKLPLKRKRGRVYLNPKMAKTICPQEV-QPGVTVSTVTG 546
Query: 470 RLFVNHGKHQLLP------------ENEPGGSSQTRPFLH-----WGSPDPENLLAELSK 512
L V H LLP +++P G Q L WG+ D LL +L++
Sbjct: 547 VLQVKDNIHDLLPLEPTKEELADEHKSKPAGPPQPYSQLRTVRYEWGTLDINLLLKKLAQ 606
Query: 513 MGIN------GSVERCMTDAESED 530
G GS + SED
Sbjct: 607 DGFTDLKVEQGSADEVTLLLPSED 630
>gi|312381856|gb|EFR27500.1| hypothetical protein AND_05771 [Anopheles darlingi]
Length = 966
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 144/587 (24%), Positives = 261/587 (44%), Gaps = 86/587 (14%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
ML LP++T GF +Y TE +IG+ +EEL+ EY + E ++ W+E
Sbjct: 410 MLALPYITEGTGFCGTVYATEPTLQIGRFFLEELV----EYIEASPKESTAK----MWKE 461
Query: 63 LE-LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS 121
LE LP+ L ++ ++ L + V +++VQ + ++ G L + SS
Sbjct: 462 LEHQLPAPLNEVFKPKNWRHLFS----MDAVNKSLARVQMTGYDQKLDIYGALQVTPISS 517
Query: 122 GLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDID 181
G +G+ NW I + IAYISGS+ + H + A++ SD+++ + L+
Sbjct: 518 GFCLGSSNWTIMSGQEKIAYISGSSTLTTHPRPINQAALKYSDVVIMTGLTQAPHV---- 573
Query: 182 QSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQ 241
N D + E+ C + +++ GGSVLIP GV
Sbjct: 574 -------------------NPDAMLGEL------CMNVMMTLRNGGSVLIPCYPSGVVYD 608
Query: 242 LLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKL 300
L E +++ ++ +IP++ IS VA+ LAY+N + EWL +Q K++ D F H L
Sbjct: 609 LFECLSVSLDNQGFTQIPMFFISPVADSSLAYSNILAEWLSTSKQNKVYIPDEPFPHASL 668
Query: 301 IKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRW-SGDHNSLLVLENE 359
+K K+ F + S +++PC+VF H SLR G +H + W S ++++ E +
Sbjct: 669 VKNSKLKHFKHIDSEGFSTEFRQPCVVFCGHPSLRFGDAVHFVELWGSNPLHTIIFTEPD 728
Query: 360 VDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW---------RT 410
A+ P++P+++K + C + Q+ L+K L+P +++ PE + +
Sbjct: 729 FPYLQALAPYQPLAIKTVFCPIETSLNFQQANKLIKELKPGVLVIPENYTQPPAIAPQKL 788
Query: 411 HVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
+ + + E I +P ++ + + +A + +K + ++ + G
Sbjct: 789 DLVIDQPPEKMIIKFKRGEVIKLPLKRKRGRVYLNPKMAKGIIPQEVK-PGVTVSTVTGV 847
Query: 471 LFVNHGKHQLLP---------ENEPGGSSQTRPFLH---------WGSPDPENLLAELSK 512
L V H LLP E+ G S P H WG+ D LL +L++
Sbjct: 848 LQVKDNIHDLLPLDAVKDEMEESSSKGKSTGPPQPHTQLRKIRYEWGTLDINLLLKKLAQ 907
Query: 513 MGINGSVERCMTDAESEDGFTVKVQDPEKSMIEVRAAVTVISAADKN 559
G +D + E G P++ + + + T+I ++K
Sbjct: 908 DG--------FSDIKVEQG------GPDEVTLVLPSEDTIIKVSEKT 940
>gi|198430712|ref|XP_002123221.1| PREDICTED: similar to Integrator complex subunit 9 (Int9) (Protein
related to CPSF subunits of 74 kDa) (RC-74) [Ciona
intestinalis]
Length = 656
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 191/412 (46%), Gaps = 44/412 (10%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELI--CMNMEYRQFYGAEESSGPQWMKW 60
M+ LP++T GF +Y TE +IG+L+MEEL+ C N + SG W K
Sbjct: 109 MMALPYITEYFGFKGTVYATEPTIQIGRLLMEELVQFCHN-------SPKNKSGGLWKKH 161
Query: 61 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
+ + LP A E C V+ +SK+ + + E G L + A S
Sbjct: 162 KYYQQLPGY---NAGCETSLATWRNCYSYDDVQTAVSKIHVVGYAELVSIFGALNVTAHS 218
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+CNW+I + YISGS+ H D + +Q SD+I+++ L+
Sbjct: 219 SGYSLGSCNWVIGTEFEKVVYISGSSSLVTHPQPLDQQPLQDSDVIIFTGLT-------- 270
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+ DN LA C +VK GG+VLIP G+
Sbjct: 271 HAPQHNPDNT---------------------LAEFFFCLAKTVKGGGNVLIPCLPTGLIY 309
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + ++ME +++ IPIY+IS A+ LA + EWL +Q K + + F H +
Sbjct: 310 DLLECLLLYMEKTNIINIPIYLISPSAKASLALSQIYAEWLHPNKQNKSYLPETPFPHDQ 369
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSG-DHNSLLVLEN 358
L+ ++ VF ++H L +++PCIVF+ H SLR+G +H + W NS++ +E
Sbjct: 370 LVSLGRLKVFSSIHD-GLSHGFKKPCIVFAGHPSLRMGDAVHFVEMWGKCSLNSIIFVEP 428
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRT 410
A+ PF+P++ + + Q ++ L P+ V+ P + T
Sbjct: 429 SYSHLDALAPFQPLTARAFHFPIDTRTTHQAASRMIDSLNPRQVVVPPSYMT 480
>gi|380023750|ref|XP_003695675.1| PREDICTED: integrator complex subunit 9-like isoform 1 [Apis
florea]
Length = 661
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 139/590 (23%), Positives = 268/590 (45%), Gaps = 76/590 (12%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
ML LPF+T GF IY TE +IG+ MEEL+ + + A+ W+E
Sbjct: 109 MLALPFITEDTGFKGIIYATEPTLQIGRFFMEELVEFIEQTPKAILAKH--------WKE 160
Query: 63 -LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS 121
L +LPS L + + ++ V +S +QT+ + ++ G L + SS
Sbjct: 161 MLHVLPSPLADALKPKSWKHIYS----MSAVNTALSYIQTVGYDQKLDIYGALTVTPISS 216
Query: 122 GLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDID 181
G +G+ NW+IS +A++SGS+ + H + ++ +++++ + L+ +
Sbjct: 217 GYCLGSSNWLISCDHEKVAFVSGSSTLTTHPRPMEQATLKHANMLILTGLTQTPT----- 271
Query: 182 QSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQ 241
+N D + E+ C +++ GG VLIP GV
Sbjct: 272 ------------------ANPDTMLGEL------CMTVAMTLRTGGCVLIPCYPSGVVYD 307
Query: 242 LLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKL 300
L E ++ ++ S ++P++ IS VAE LAY+N + EWL +Q K++ + F H L
Sbjct: 308 LFECLSTHLDKSGFAQVPLFFISPVAETSLAYSNILAEWLSTNKQNKVYLPEEPFPHAFL 367
Query: 301 IKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENE 359
+K ++ F + ++ ++++PC+VF H SLR G +H ++ W + ++++ E +
Sbjct: 368 VKNARLKHFTSTYAEGFSSDYRQPCVVFCGHPSLRFGDAVHFVQLWGNNPQHTIIFTEPD 427
Query: 360 VDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW---------RT 410
A+ PF+P++MK + C + + L++ L+P+ ++ PE + RT
Sbjct: 428 FPYLDALAPFQPLAMKAVHCPIDTSLNFTQANKLIRDLKPEHLVIPECYTQPPITAPHRT 487
Query: 411 HVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
+ V + + E I +P ++ + I ++A ++ L++ + G
Sbjct: 488 DLVIEPVGEKPLITFKRGEVIKLPLKRKKGRVFIEPELAGNIIPNEIR-PGLSLASVTGE 546
Query: 471 LFVNHGKHQLLP-ENEPGG-----SSQTRPFL---------HWGSPDPENLLAELSKMGI 515
L V + + E+ P G S P +G+ DP+ LL +L++ GI
Sbjct: 547 LEVKDNVYTIKSIEDRPSGKRKAPSGSPAPIKEEVLKERKHEYGNLDPQELLQKLNQEGI 606
Query: 516 NGSVERCMTDAESEDGFTVKVQDPEKSMIEVRAAVT-VISAADKNLASRI 564
G+ + S ++ +QD E ++I++ T + D+ + R+
Sbjct: 607 QGAKLQ-----HSPTATSIHLQD-EDTLIQIGDNSTHIFCNGDQKIRRRL 650
>gi|383862659|ref|XP_003706801.1| PREDICTED: integrator complex subunit 9-like [Megachile rotundata]
Length = 661
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 138/572 (24%), Positives = 262/572 (45%), Gaps = 77/572 (13%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMK-WE 61
ML LPF+T GF IY TE +IG+ MEEL+ E+ E++ K W+
Sbjct: 109 MLALPFITEDSGFKGIIYATEPTLQIGRFFMEELV----EF-----IEQTPKATLAKHWK 159
Query: 62 E-LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
E L +LP L + + ++ V +S +QT+ + ++ G L + S
Sbjct: 160 EMLHVLPPPLADALKPKSWKHIYS----MSAVNTALSYIQTVGYDQKLDIYGALTVTPIS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NW+IS +A++SGS+ + H + ++ +++++ + L+ +
Sbjct: 216 SGYCLGSSNWLISCDHEKVAFVSGSSTLTTHPRPMEQATLKHANMLILTGLTQTPT---- 271
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D + E+ C +++ GG VLIP GV
Sbjct: 272 -------------------ANPDTMLGEL------CMTVAMTLRTGGCVLIPCYPSGVVY 306
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
L E ++ ++ S ++P++ IS VAE LAY+N + EWL +Q K++ + F H
Sbjct: 307 DLFECLSTHLDKSGFSQVPLFFISPVAETSLAYSNILAEWLSTNKQNKVYLPEEPFPHAF 366
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 358
L+K ++ F + ++ ++++PC+VF H SLR G +H ++ W + ++++ E
Sbjct: 367 LVKNARLKHFTSTYAEGFSSDYRQPCVVFCGHPSLRFGDAVHFVQLWGNNPQHTIIFTEP 426
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW---------R 409
+ A+ PF+P++MK + C + + L++ L+P+ ++ PE + R
Sbjct: 427 DFPYLDALAPFQPLAMKAVHCPIDTSLNFTQANKLIRDLKPEHLVIPECYTQPPMTAPHR 486
Query: 410 THVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKG 469
T + V + + E I +P ++ + I ++A ++ L++ + G
Sbjct: 487 TDLVIEPVGEKPLITFKRGEVIKLPLKRKKGRVFIEPELAGNIIPNEIR-PGLSLASVTG 545
Query: 470 RLFVNHGKHQLLP-ENEPGG-----SSQTRPFL---------HWGSPDPENLLAELSKMG 514
L V + + E+ P G S P +G+ DP+ LL +LS+ G
Sbjct: 546 ELEVKDNVYTIKNIEDRPSGKRKVSSGSPAPIKEEVLKERKHEYGNLDPQELLQKLSQEG 605
Query: 515 INGSVERCMTDAESEDGFTVKVQDPEKSMIEV 546
I G+ + S ++ +QD E ++I++
Sbjct: 606 IQGAKLQ-----HSPTSTSIHLQD-EDTLIQI 631
>gi|350408417|ref|XP_003488397.1| PREDICTED: integrator complex subunit 9-like isoform 1 [Bombus
impatiens]
Length = 644
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 140/589 (23%), Positives = 271/589 (46%), Gaps = 76/589 (12%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMK-WE 61
ML LPF+T GF IY TE +IG+ MEEL+ E+ E++ K W+
Sbjct: 94 MLALPFITEDTGFKGIIYATEPTLQIGRFFMEELV----EF-----IEQTPKATLAKHWK 144
Query: 62 E-LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
E L +LP L + + I+ V +S +QT+ + ++ G L + S
Sbjct: 145 EMLHVLPPPLADALKPKSWKHIYS----ISAVNTSLSYIQTVGYDQKLDIYGALTVTPIS 200
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NW+IS +A++SGS+ + H + ++ +++++ + L+ +
Sbjct: 201 SGYCLGSSNWLISCDHEKVAFVSGSSTLTTHPRPMEQATLKHANMLILTGLTQTPT---- 256
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D + E+ C +++ GG VLIP GV
Sbjct: 257 -------------------ANPDTMLGEL------CMTVAITLRTGGCVLIPCYPSGVVY 291
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
L E ++ ++ S ++P++ IS VAE LAY+N + EWL +Q K++ + F H
Sbjct: 292 DLFECLSTHLDKSGFSQVPLFFISPVAETSLAYSNILAEWLSTNKQNKVYLPEEPFPHAF 351
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 358
L+K ++ F ++++ ++++PC+VF H SLR G +H ++ W + ++++ E
Sbjct: 352 LVKNARLKHFTSIYAEGFSSDYRQPCVVFCGHPSLRFGDAVHFVQLWGNNPQHTIIFTEP 411
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVSFSDV 417
+ A+ PF+P++MK + C + + L++ L+P+ ++ PE + + ++
Sbjct: 412 DFPYLDALAPFQPLAMKAVHCPIDTSLNFTQANKLIRDLKPEHLVIPECYTQPPITAPHR 471
Query: 418 TSFSVS------HYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRL 471
T + + E I +P ++ + I ++A ++ L++ + G L
Sbjct: 472 TDLVIEPEKPLITFKRGEVIKLPLKRKKGRVFIEPELAGNIIPNEIR-PGLSLASVTGEL 530
Query: 472 FVNHGKHQLLP-ENEPGG-----SSQTRPFL---------HWGSPDPENLLAELSKMGIN 516
V + + E+ P G SS P +G+ DP+ LL +L++ GI
Sbjct: 531 EVKDNVYTIKSIEDRPSGKRKASSSSPAPIKEEVLKERKHEYGNLDPQELLQKLNQEGIQ 590
Query: 517 GSVERCMTDAESEDGFTVKVQDPEKSMIEVRAAVT-VISAADKNLASRI 564
G+ + S ++ +QD E ++I++ T + D+ + R+
Sbjct: 591 GAKLQ-----HSPTATSIHLQD-EDTLIQIGDNSTHIFCNGDQKIRRRL 633
>gi|346467411|gb|AEO33550.1| hypothetical protein [Amblyomma maculatum]
Length = 518
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 213/440 (48%), Gaps = 45/440 (10%)
Query: 92 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 151
V +SKV+ + F E+ G++ + A SSG +G+CNWI++ I Y+SGS+ + H
Sbjct: 55 VNSSLSKVKVVGFAEKVDVFGMVQVSAVSSGYCLGSCNWIVTADHEKIVYMSGSSTLTTH 114
Query: 152 AMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEK 211
++ ++ +D ++ L+SL T L+N D + E
Sbjct: 115 PKPIEHAPLRNADALI---LTSLTQTP--------------------LANPDTMLGEF-- 149
Query: 212 LAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS-LKIPIYIISSVAEELL 270
C +VK GG+VLIP GV L E ++ +E + + +P+Y +S VAE L
Sbjct: 150 ----CITVAMTVKMGGNVLIPCYPSGVTYDLFECLSGHLETTGQVNVPMYFLSPVAENSL 205
Query: 271 AYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSP 330
AY++ + EWL +Q K++ + F H +L++ ++ F ++ + ++ PCIVF+
Sbjct: 206 AYSSILAEWLSSAKQAKVYIPEEPFPHAQLVRGGRLKPFSSIKAEGFTADFHTPCIVFAG 265
Query: 331 HWSLRLGPTIHLLRRWSGDHNSLLVL-ENEVDAELAVLPFKPISMKVLQCSFLSGKKLQK 389
H SLR G +H + W N++++ E + + A+ PF+P++MK L + +
Sbjct: 266 HPSLRFGDVVHFMELWGPSPNNVVIFTEPDFNLAEAIAPFQPMAMKALCFPIDTSLSFVQ 325
Query: 390 VQPLLKILQPKLVLFPEEWR----THVSFSDV---TSFSVSHYSENETIHIPSLKESAEL 442
L++ L+P ++ P ++ SD+ T V Y+ +HIP + +
Sbjct: 326 ANKLIRDLKPTNLVLPLQYTLPPLLQPHRSDLVIETECEVQTYTRGSIVHIPVQRRYQRI 385
Query: 443 EIAADIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQLLP-ENEPGGS----SQTRPFLH 497
E+++++AS +K L I L G L VN+ + L P + +P GS QT P ++
Sbjct: 386 EMSSELASSLVPVEVK-CGLGIATLTGALHVNNNRCVLKPLQKDPSGSKKWNGQTPPKIY 444
Query: 498 -WGSPDPENLLAELSKMGIN 516
WGS D +L K G
Sbjct: 445 TWGSLDVTEFARKLDKAGFT 464
>gi|125978461|ref|XP_001353263.1| GA18747 [Drosophila pseudoobscura pseudoobscura]
gi|195160209|ref|XP_002020968.1| GL25097 [Drosophila persimilis]
gi|54642017|gb|EAL30766.1| GA18747 [Drosophila pseudoobscura pseudoobscura]
gi|194118081|gb|EDW40124.1| GL25097 [Drosophila persimilis]
Length = 657
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 140/566 (24%), Positives = 256/566 (45%), Gaps = 51/566 (9%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
+ ML LP++T GF K+Y TE +IG+ +EEL+ +Y + + + W
Sbjct: 106 LNMLALPYITENTGFKGKVYATEPTLQIGRFFLEELV----DYIEV-SPKACTARLWK-- 158
Query: 61 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
E+L LLPS L + + + + V+ + KV + + E+ G I S
Sbjct: 159 EKLHLLPSPLCEAFRAKKWRTIFS----LKDVQGSLLKVTIMGYDEKLDILGAFIATPVS 214
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NW++S A I Y+SGS+ + H + A++ +D+++ + L+
Sbjct: 215 SGYCLGSSNWVLSTAHEKICYVSGSSTLTTHPRPINQSALKHADVLIMTGLTQA------ 268
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+V KL +C +++ GS LIP GV
Sbjct: 269 -----------------------PTVNPDTKLGELCMNVALTIRNNGSALIPCYPSGVVY 305
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
L E + +E + L +P++ IS VA+ LAY+N + EWL +Q K++ D F H
Sbjct: 306 DLFECLTQNLENAGLNNVPMFFISPVADSSLAYSNILAEWLSSAKQNKVYLPDDPFPHAF 365
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 358
++ K+ + V S ++++PC+VF H SLR G +H + W + +NS++ E
Sbjct: 366 YLRNNKLKHYNHVFSEGFSKDFRQPCVVFCGHPSLRFGDAVHFIEMWGNNPNNSIIFTEP 425
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVS---- 413
+ + PF+P++MK C + Q+ L+K L+P +++ PE + + H S
Sbjct: 426 DFPYLQVLAPFQPLAMKAFYCPIDTSLNYQQANKLIKELKPNVLVIPEAYTKPHPSAPNL 485
Query: 414 FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFV 473
F + + + E + +P ++ + + +++ K R + + + L G L V
Sbjct: 486 FIEQPDKKIITFKCGEILRLPLKRKLDRIYLTYELSQKIFPREV-AAGVTFSTLTGVLQV 544
Query: 474 NHGKHQLLPENEPGGSSQTRPFLHWGSPDPENLLAELSKMGINGSVERCMTDAESEDGFT 533
H + P E + +P E++L ++ + VE M ++DGFT
Sbjct: 545 KDKVHCIQPCAEIKEEPSSSSAGTAAAPTKEDVLQKVKYEYGSIDVEAVMKRL-TQDGFT 603
Query: 534 -VKVQDPEKSM-IEVRAAVTVISAAD 557
+K+ + S+ I++ T+I D
Sbjct: 604 NIKLDRTDGSLSIQLVNEDTIIKFED 629
>gi|322799917|gb|EFZ21058.1| hypothetical protein SINV_14498 [Solenopsis invicta]
Length = 675
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 142/605 (23%), Positives = 273/605 (45%), Gaps = 93/605 (15%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW-- 60
ML LPF+T GF IY TE +IG+ MEEL+ E+ E + K+
Sbjct: 110 MLALPFITEGTGFKGIIYATEPTLQIGRFFMEELV----EF-----IERTPKATMAKYWK 160
Query: 61 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
+ L +LPS L +I + +A V +S +QT+ + ++ G L + S
Sbjct: 161 DMLHMLPSPLAEIR-----PKSWKHIYSMAAVNSALSNIQTVGYDQKLDIYGALTVTPIS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NW+IS +A++SGS+ + H D ++ ++L++ + L+ +
Sbjct: 216 SGFCLGSSNWLISSDHEKVAFVSGSSTLTTHPKPMDQATLKHANLLILTGLTQTPT---- 271
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D + E+ C +++AGG VLIP GV
Sbjct: 272 -------------------ANPDTMLGEL------CMTVAVTLRAGGCVLIPCYPSGVVY 306
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
L E ++ ++ S ++P++ IS VAE LAY+N + EWL +Q K++ + F H
Sbjct: 307 DLFECLSTHLDKSGFTQVPLFFISPVAESSLAYSNILAEWLSTGKQNKVYLPEEPFPHAF 366
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
L+K ++ + + ++ ++++PC+VF H SLR G +H ++ W + ++++ E
Sbjct: 367 LVKNARLKHYTSTYAEGFSNDYRQPCVVFCGHPSLRFGDAVHFVQLWGNNPLHTVIFTEP 426
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW---------R 409
+ A+ PF+P++MK + C + + L++ L+P+ ++ PE + R
Sbjct: 427 DFPYIDALAPFQPLAMKAVHCPIDTSLNFTQANKLIRDLKPEHLVIPEVYTQPPAMAQHR 486
Query: 410 THVSFSDVTSFS--------------VSHYSENETIHIPSLKESAELEIAADIASKFQWR 455
T + + S + + E I +P ++ + I ++AS
Sbjct: 487 TDLVIEPIGRVSSKITCIISLFKDKPLITFKRGEVIKLPLKRKKGRVFIEPELASSIVPS 546
Query: 456 MLKQKKLNITRLKGRLFVNHGKHQLLP-ENEPGGSSQTR-----PFL---------HWGS 500
++ L++ + G L V + + E+ P G + P + +G+
Sbjct: 547 EVR-PGLSLASVTGELEVKDNVYTIKSVEDRPSGKRKMSLGSPAPIVEEVLKERKHEYGN 605
Query: 501 PDPENLLAELSKMGINGSVERCMTDAESEDGFTVKVQDPEKSMIEVRAAVT-VISAADKN 559
DP+ LL +L++ G +G+ + S ++ +QD E ++I++ T + D+
Sbjct: 606 LDPQELLQKLNQEGFHGAKLQ-----HSPTSTSIHLQD-EDTLIQIGDNSTHIFCNGDQK 659
Query: 560 LASRI 564
+ R+
Sbjct: 660 IRKRL 664
>gi|380023752|ref|XP_003695676.1| PREDICTED: integrator complex subunit 9-like isoform 2 [Apis
florea]
Length = 644
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 137/588 (23%), Positives = 268/588 (45%), Gaps = 74/588 (12%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
ML LPF+T GF IY TE +IG+ MEEL+ + + A+ W+E
Sbjct: 94 MLALPFITEDTGFKGIIYATEPTLQIGRFFMEELVEFIEQTPKAILAKH--------WKE 145
Query: 63 -LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS 121
L +LPS L + + ++ V +S +QT+ + ++ G L + SS
Sbjct: 146 MLHVLPSPLADALKPKSWKHIYS----MSAVNTALSYIQTVGYDQKLDIYGALTVTPISS 201
Query: 122 GLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDID 181
G +G+ NW+IS +A++SGS+ + H + ++ +++++ + L+ +
Sbjct: 202 GYCLGSSNWLISCDHEKVAFVSGSSTLTTHPRPMEQATLKHANMLILTGLTQTPT----- 256
Query: 182 QSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQ 241
+N D + E+ C +++ GG VLIP GV
Sbjct: 257 ------------------ANPDTMLGEL------CMTVAMTLRTGGCVLIPCYPSGVVYD 292
Query: 242 LLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKL 300
L E ++ ++ S ++P++ IS VAE LAY+N + EWL +Q K++ + F H L
Sbjct: 293 LFECLSTHLDKSGFAQVPLFFISPVAETSLAYSNILAEWLSTNKQNKVYLPEEPFPHAFL 352
Query: 301 IKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENE 359
+K ++ F + ++ ++++PC+VF H SLR G +H ++ W + ++++ E +
Sbjct: 353 VKNARLKHFTSTYAEGFSSDYRQPCVVFCGHPSLRFGDAVHFVQLWGNNPQHTIIFTEPD 412
Query: 360 VDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW-RTHVSFSDVT 418
A+ PF+P++MK + C + + L++ L+P+ ++ PE + + ++ T
Sbjct: 413 FPYLDALAPFQPLAMKAVHCPIDTSLNFTQANKLIRDLKPEHLVIPECYTQPPITAPHRT 472
Query: 419 SFSVS------HYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLF 472
+ + E I +P ++ + I ++A ++ L++ + G L
Sbjct: 473 DLVIEPEKPLITFKRGEVIKLPLKRKKGRVFIEPELAGNIIPNEIR-PGLSLASVTGELE 531
Query: 473 VNHGKHQLLP-ENEPGG-----SSQTRPFL---------HWGSPDPENLLAELSKMGING 517
V + + E+ P G S P +G+ DP+ LL +L++ GI G
Sbjct: 532 VKDNVYTIKSIEDRPSGKRKAPSGSPAPIKEEVLKERKHEYGNLDPQELLQKLNQEGIQG 591
Query: 518 SVERCMTDAESEDGFTVKVQDPEKSMIEVRAAVT-VISAADKNLASRI 564
+ + S ++ +QD E ++I++ T + D+ + R+
Sbjct: 592 AKLQ-----HSPTATSIHLQD-EDTLIQIGDNSTHIFCNGDQKIRRRL 633
>gi|241050126|ref|XP_002407379.1| cleavage and polyadenylation specificity factor, putative [Ixodes
scapularis]
gi|215492202|gb|EEC01843.1| cleavage and polyadenylation specificity factor, putative [Ixodes
scapularis]
Length = 644
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 120/460 (26%), Positives = 218/460 (47%), Gaps = 54/460 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQW-MKWE 61
ML LP++T GF +Y+TE IG+ M+EL+ E + P+ KW+
Sbjct: 108 MLALPYVTEGTGFKGTVYMTEPTLLIGRQFMDELVTY---------IERTPKPRTATKWK 158
Query: 62 ELELLPSALRKIALGEDGS--ELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAF 119
+ + L LG+ S +L + V +SKV+ + F E+ G++ + A
Sbjct: 159 QQAVKFPQLSSQDLGKPRSWKQLYN----MHDVNSSLSKVKVVGFAEKVDVFGMVQVSAV 214
Query: 120 SSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTED 179
SSG +G+CNWI++ Y+SGS+ + H ++ ++ +D+++ L+SL T
Sbjct: 215 SSGYCLGSCNWIVTADHEKAMYMSGSSTLTTHPKPIEHGPLRNADVLI---LTSLTQT-- 269
Query: 180 IDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVF 239
L+N D + E C +VK GG+VLIP GV
Sbjct: 270 ------------------PLANPDTMLGEF------CITVAMTVKMGGNVLIPCYPSGVT 305
Query: 240 LQLLEQIAIFMECSS-LKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHV 298
L E ++ +E + + +P+Y +S VA+ LAY++ + EWL +Q K++ + F H
Sbjct: 306 YDLFECLSGHLETTGQVNVPMYFLSPVADNSLAYSSILAEWLSSAKQAKVYLPEEPFPHA 365
Query: 299 KLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL-E 357
+L++ ++ F ++ + ++ PCIVF+ H SLR G +H + W N++++ E
Sbjct: 366 QLVRGGRLKPFSSIQAEGFTADFHTPCIVFAGHPSLRFGDVVHFMELWGPSSNNVVIFTE 425
Query: 358 NEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRT----HVS 413
+ + A+ PF+P++MK L + + L++ L+P ++ P +
Sbjct: 426 PDFNLADAIAPFQPMAMKALCFPIDTSLSFVQANKLVRDLKPSNLVLPRQHTVPPLLQPH 485
Query: 414 FSDVT---SFSVSHYSENETIHIPSLKESAELEIAADIAS 450
SD+ V ++ +HIP + +E+ A++AS
Sbjct: 486 RSDLVIEADCDVQTFTRGSIVHIPVHRRYQRIEMNAELAS 525
>gi|307202731|gb|EFN82022.1| Integrator complex subunit 9 [Harpegnathos saltator]
Length = 608
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 129/544 (23%), Positives = 247/544 (45%), Gaps = 71/544 (13%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMK-WE 61
ML LPF+T GF IY TE +IG+ MEEL+ +F E++ K W+
Sbjct: 78 MLALPFITEGTGFKGIIYATEPTLQIGRFFMEELV-------EF--IEQTPKTTLAKHWK 128
Query: 62 E-LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
E L +LP L + + + ++ + +S +Q + + ++ G LI+ S
Sbjct: 129 EMLHVLPCPLADVIKPKSWRHIYS----VSAINSALSNIQLVGYDQKLDIYGALIVTPIS 184
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NW+IS +A++SGS+ + H + ++ +++++ + L+ +
Sbjct: 185 SGYCLGSSNWLISSDHEKVAFVSGSSTLTTHPKPMEQATLKNANMLILTGLTQTPT---- 240
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D + E+ C +++AGG VLIP GV
Sbjct: 241 -------------------ANPDTMLGEL------CMTVAVTLRAGGCVLIPCYPSGVVY 275
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
L E ++ ++ S ++P++ IS VAE LAY+N + EWL +Q K++ + F H
Sbjct: 276 DLFECLSTHLDKSGFTQVPLFFISPVAETSLAYSNILAEWLSTNKQNKVYLPEEPFPHAF 335
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLEN 358
L+K ++ F + ++ ++++PC+VF H SLR G +H ++ W + ++++ E
Sbjct: 336 LVKNARLKHFTSTYAEGFSNDYRQPCVVFCGHPSLRFGDAVHFVQLWGNNPLHTIIFTEP 395
Query: 359 EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW---------R 409
+ A+ PF+P++MK + C + + L++ L+P+ ++ PE + R
Sbjct: 396 DFPYLDALAPFQPLAMKAVHCPIDTSLNFTQANKLIRDLKPEHLVIPECYTQPPLTASHR 455
Query: 410 THVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKG 469
+ V + + E I +P ++ + I ++A ++ L++ + G
Sbjct: 456 ADLVIEPVGEKPLITFKRGEVIKLPLKRKKGRVFIEPELAGSIVPNEIR-PGLSLASVTG 514
Query: 470 RLFVNHGKHQLLPENE------PGGSSQTRPFL---------HWGSPDPENLLAELSKMG 514
L V + + + SS P +G+ DP+ LL +LS+ G
Sbjct: 515 ELEVKDNVYTIKAIEDRSSIKRKASSSSPVPVKEEVLKERKHEYGNLDPQELLQKLSQEG 574
Query: 515 INGS 518
G+
Sbjct: 575 FQGA 578
>gi|391329424|ref|XP_003739174.1| PREDICTED: integrator complex subunit 9-like [Metaseiulus
occidentalis]
Length = 641
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 144/586 (24%), Positives = 267/586 (45%), Gaps = 80/586 (13%)
Query: 2 GMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMK-- 59
ML LPF+T F ++Y+TE A IG+L MEELI EY + P+ +
Sbjct: 106 NMLALPFITEDSNFRGEVYMTEPTALIGRLYMEELI----EY-----IDRCPKPKVAQKI 156
Query: 60 WEELELLPSALRKIALG---EDGSELG--GGCPCIAHVKDCISKVQTLRFGEEACYNGIL 114
++E+E LG DGS++ + +V +C++KV+T+ F ++ G L
Sbjct: 157 YKEIEFFGQ------LGPFHTDGSKVSLWQEIYTLKNVANCLTKVKTVGFNQKLSIFGNL 210
Query: 115 IIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSL 174
+ S+G +G+CNW+I I Y++ S+ + H +++ ++G D++L + L
Sbjct: 211 QVSCASAGYCVGSCNWMIQSDMEKIGYMASSSTFTTHPKPIEHQFLRGVDVLLIASL--- 267
Query: 175 DSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPIN 234
+Q+ ++ N EL C +++K+GG+VLIP +
Sbjct: 268 ------NQTPLANPNTLLGEL--------------------CQAVENTLKSGGNVLIPCS 301
Query: 235 RVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL 294
GV L E ++ +E + +Y +S VA + LAY+ + EWL +Q+K++ +
Sbjct: 302 SAGVVYDLFECLSGHLESKGILNTMYFVSPVAHKSLAYSGILAEWLTAAKQQKVYIPEEP 361
Query: 295 FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSL 353
F H L+K ++ V+ ++ + + P +VF+ H SLR G ++HL+ W D N++
Sbjct: 362 FPHSHLMKCGRLKVYESIADEAFMNEFHVPSVVFAGHPSLRFGDSVHLMELWQNDPSNAV 421
Query: 354 LVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLV----LFPEEWR 409
+ E + + AV PF+PIS+KVL + + LL+ ++P ++ ++ E
Sbjct: 422 IFTEPDFNYVDAVAPFQPISIKVLYYPIDTLLTFSQANKLLREMRPNVLVTHNVYNEAPA 481
Query: 410 THVSFSDVT---SFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKK-LNIT 465
+ S+V F E + IP + ++E+ +A + KK + ++
Sbjct: 482 NCTNRSEVALEPEFRFLTVKRPEVVQIPIKRRIQKVEMDPKLADDVVPVETEFKKGVAVS 541
Query: 466 RLKGRLFVNHGKHQLLPENEPGGSSQTRPFLH-WGSPDPENLLAELSKMGINGSVERCMT 524
L L V + + L G + T H +G + A+L+K G +
Sbjct: 542 SLTASLTVKNNQCTL------GKPTNTTKISHPYGELSVKQFTAKLAKQGFVDIKTETIG 595
Query: 525 DAES----EDGFTVKVQDPEKSMIEVRAAVTVISAADKNLASRIVK 566
+A + +G ++++D + + + D + SRI K
Sbjct: 596 NATTIHLPREGVLIRLED---------HSTHICDSVDTTVRSRIQK 632
>gi|307189043|gb|EFN73542.1| Integrator complex subunit 9 [Camponotus floridanus]
Length = 661
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 135/590 (22%), Positives = 266/590 (45%), Gaps = 76/590 (12%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
ML LPF+T GF IY TE +IG+ MEEL+ E+ + + W+E
Sbjct: 109 MLALPFITEGTGFKGIIYATEPTLQIGRFFMEELV----EFIE----QTPKATMAKHWKE 160
Query: 63 -LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS 121
L +LP L + + + + V +S +Q + + ++ G L + SS
Sbjct: 161 MLHMLPPPLADVIKPKSWRHIYS----TSAVNSALSHIQMVGYDQKLDIYGALTVTPISS 216
Query: 122 GLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDID 181
G +G+ NW+IS +A++SGS+ + H + ++ +++++ + L+ +
Sbjct: 217 GYCLGSSNWLISCDHEKVAFVSGSSTLTTHPRPMEQATLKHANMLILTGLTQTPT----- 271
Query: 182 QSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQ 241
+N D + E+ C +++AGG VLIP GV
Sbjct: 272 ------------------ANPDTMLGEL------CMTVAVTLRAGGCVLIPCYPSGVVYD 307
Query: 242 LLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKL 300
L E ++ ++ S ++P++ IS VAE LAY+N + EWL +Q K++ + F H L
Sbjct: 308 LFECLSTHLDKSGFTQVPLFFISPVAETSLAYSNILAEWLSTNKQNKVYLPEEPFPHAFL 367
Query: 301 IKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLENE 359
+K ++ + + ++ ++++PC+VF H SLR G +H ++ W + ++++ E +
Sbjct: 368 VKNARLKHYTSTYAEGFSNDYRQPCVVFCGHPSLRFGDAVHFVQLWGNNPLHTVIFTEPD 427
Query: 360 VDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW---------RT 410
A+ PF+P++MK + C + + L++ L+P+ ++ PE + RT
Sbjct: 428 FPYLDALAPFQPLAMKAVHCPIDTSLNFTQANKLIRDLKPEHLVIPEVYTQPPLTAPHRT 487
Query: 411 HVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGR 470
+ V + + E I +P ++ + I ++AS ++ L++ + G
Sbjct: 488 DLVIEPVGEKPLITFKRGEVIKLPLKRKKGRVFIEPELASNIIPNEVR-PGLSLASVTGE 546
Query: 471 LFVNHGKHQL--LPENEPG----GSSQTRPFL---------HWGSPDPENLLAELSKMGI 515
L V + + + + + G S P +G DP+ LL +L++ G
Sbjct: 547 LEVKDNVYTIKNIEDRQSGKRKASSGSPAPVKEEVLKERKHEYGILDPQELLQKLNQEGF 606
Query: 516 NGSVERCMTDAESEDGFTVKVQDPEKSMIEVRAAVT-VISAADKNLASRI 564
G+ + S ++ +QD E ++I++ T + D+ + R+
Sbjct: 607 QGAKLQ-----HSPTSTSIHLQD-EDTLIQIGDNSTHIFCNGDQKIRKRL 650
>gi|340373691|ref|XP_003385374.1| PREDICTED: integrator complex subunit 9-like [Amphimedon
queenslandica]
Length = 637
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 134/528 (25%), Positives = 236/528 (44%), Gaps = 58/528 (10%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
L LP+L GFS K+Y TE ++G+ +MEEL +F + W
Sbjct: 108 FSFLSLPYLFEF-GFSGKVYATEPTKQLGRQLMEELC-------EFLYRLPTPSKNWRDE 159
Query: 61 EELELLP-SALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAF 119
L+ LP A++ + + IS VQ + +G++ G + A
Sbjct: 160 SILQSLPECAVKTLTDVNSWKSFYKS----DDITSAISIVQGISYGQKLDLFGSVQATAL 215
Query: 120 SSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTED 179
SSG +G+CNW++ I Y+S S+ + H + +++ D ++ S L++ S
Sbjct: 216 SSGYCLGSCNWLMETKYSKIGYVSSSSTFTTHPCPMERQSLLSCDALILSSLTNAPS--- 272
Query: 180 IDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVF 239
+N D + E+ C+ +++ GG+VLIP GV
Sbjct: 273 --------------------ANPDTMLGEL------CTKMATTLRGGGNVLIPCYPTGVV 306
Query: 240 LQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHV 298
LLE + F++ + L +P+Y+IS VA+ L+ N EWLC+ +Q K++ + F H
Sbjct: 307 YDLLECLHTFLDNAGLVGVPVYMISPVAKNSLSLANIYAEWLCEAKQSKVYQPEHPFPHA 366
Query: 299 KLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRW-SGDHNSLLVLE 357
+ IK ++ FP ++ L +Q PC+VF+ H SLR G +H + W S NS++ E
Sbjct: 367 EFIKSGRLKHFPNIYG-DLGNVYQTPCVVFAGHPSLRCGDAVHFMEVWGSSSKNSVIFTE 425
Query: 358 NEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFS-- 415
D A+ P++P++MK LLK LQP++++ P ++ + +
Sbjct: 426 PGFDYLHALTPYQPLNMKAFYFPIDPCMNFFVANKLLKELQPQVLITPTDYLPSAAQTQK 485
Query: 416 DVTSFS--VSHYS--ENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRL 471
D T + Y + + + ++E+ +++AS + + + T L G L
Sbjct: 486 DTTCLQPEMPFYGVKRGSVVKVELASKYKKIEMTSELASTIFPQEINPGVM-ATSLSGLL 544
Query: 472 FVNHGKHQLLPENEPGGSSQTRPFLHWGSPDPENLLAELSKMGINGSV 519
+ G ++L P P +P WG + ++L+ L + GI V
Sbjct: 545 TIRSGNNKLHPLPHP------KPKNLWGHTNAQSLIEALKEHGITDIV 586
>gi|345317717|ref|XP_003429920.1| PREDICTED: integrator complex subunit 9 [Ornithorhynchus anatinus]
Length = 643
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 142/560 (25%), Positives = 252/560 (45%), Gaps = 64/560 (11%)
Query: 2 GMLGLPFLTRMEGFS--AKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMK 59
G G + +GF ++ +++ + +L+MEEL+ N R + S W
Sbjct: 104 GAAGRKLTSSSQGFPPGSRGLSADSSLPLPRLLMEELV--NFIERV---PKAQSASLWKN 158
Query: 60 WEELELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIK 117
E LLP+ L+ D E+ C + V +SK+Q + + ++ G + +
Sbjct: 159 KEVQRLLPAPLK------DAVEVATWRRCYTMPEVNSALSKIQLVGYSQKIELFGAVQVT 212
Query: 118 AFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDST 177
SSG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 213 PLSSGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGLTQIPT- 271
Query: 178 EDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVG 237
+N D V E CS +V+ GG+VL+P G
Sbjct: 272 ----------------------ANPDGMVGEF------CSSLAMTVRNGGNVLVPCYPSG 303
Query: 238 VFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFA 296
V LLE + +M+ + L +P+Y IS VA L ++ EWLC +Q K++ +P F
Sbjct: 304 VIYDLLECLYQYMDSAGLSNVPLYFISPVANSSLEFSQIFAEWLCHNKQTKVYLPEPPFP 363
Query: 297 HVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLV 355
H +LI+ K+ +P++ ++++PC+VF+ H SLR G +H + W N+++
Sbjct: 364 HAELIQTNKLKHYPSIPG-DFSNDFKQPCVVFTGHPSLRCGDVVHFMELWGRSGLNTVIF 422
Query: 356 LENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWR----TH 411
E + A+ P++P++MK + C + +V LLK +QP V+ PE++ T
Sbjct: 423 TEPDFSYLEALAPYQPLAMKCVYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQPPPTQ 482
Query: 412 VSFSDVT---SFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLK 468
D+ Y E + +P + ++EI ++A +K +++ +
Sbjct: 483 AHRVDLVIGCHPPAMSYRRAEVLTLPFKRRYEKIEIVPELADSLVPMEIK-PGISLATVS 541
Query: 469 GRLFVNHGKH--QLLPENEPGGSSQTRPFLHWGSPDPENLLAELSKMGINGSVE-RCMTD 525
L KH Q P++ P + R + PD + L LS GS+
Sbjct: 542 AMLHTKDNKHVLQPPPKSGPAPVGKKRKRVMDDIPDCKPLKPLLS-----GSIPVDQFVQ 596
Query: 526 AESEDGFT-VKVQDPEKSMI 544
A + GF+ VKV+D K I
Sbjct: 597 ALEKHGFSDVKVEDTAKGHI 616
>gi|324506537|gb|ADY42789.1| Integrator complex subunit 9 [Ascaris suum]
Length = 646
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 124/483 (25%), Positives = 221/483 (45%), Gaps = 54/483 (11%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
M +L LPF T F +Y T+ ++G+L+MEE+ +EY + + QW +
Sbjct: 101 MSLLALPFFTERSEFRGTVYATDPTLQLGRLVMEEM----LEYLE-RSEKTKVDEQWKQH 155
Query: 61 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
+ P+ D E G A ++ I++V L F + +L I A+S
Sbjct: 156 DVFANFPNVP-----SSDPREWIGFY-TRAQMQHAIARVHILSFHHTVNVSDVLTITAYS 209
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSD-LILYSDLSSLDSTED 179
SG IG+CNW+I I Y+S ++ + H D+ ++GSD LIL S + + D
Sbjct: 210 SGYSIGSCNWVIRTEHEKIGYLSATSSRNSHTKAVDWDQLRGSDALILTSICRFPEHSPD 269
Query: 180 IDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVF 239
NS+ N + + +++K GSVL+P+ GV
Sbjct: 270 -----------------NSVCN-------------VFTVMAETLKKNGSVLMPMCPTGVL 299
Query: 240 LQLLEQIAIFMECS--SLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAH 297
LLE I + ++ ++ IP+Y IS VAE +A++N PEWL ++Q + + F H
Sbjct: 300 YDLLEVITVQLDQQGVAMDIPVYFISPVAESSIAFSNIYPEWLSDKKQNMAYFPEEPFTH 359
Query: 298 VKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVL 356
L+K ++ VF ++H L + PCI+F+ H SLR G + L W + N++++
Sbjct: 360 AYLMKCGRLKVFESLHG-ALCHQLKTPCILFTGHPSLRFGEAVRFLELWGNNPRNAIIMT 418
Query: 357 ENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQP-LLKILQPKLVLFPEEW-RTHVSF 414
+ + + P++ ++++ + ++ P ++ L PKL+L PE + + +
Sbjct: 419 DPDYPLKDVYGPYQNLAIRAFFYPIDTRLDYSQLNPSIMPDLSPKLLLMPEAYVQPPATA 478
Query: 415 SDVTSFSVSH-----YSENETIHIPSLKESAELEIAADIASKFQWRML-KQKKLNITRLK 468
F V+H + + + IPS+ + + + ++ R +Q + I LK
Sbjct: 479 PQRVDFVVTHNPHTTFRYGDMLTIPSITKRKRIRLHPELLKSLNLRARGEQSDVGICALK 538
Query: 469 GRL 471
G L
Sbjct: 539 GYL 541
>gi|380793321|gb|AFE68536.1| integrator complex subunit 9 isoform 1, partial [Macaca mulatta]
Length = 423
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 171/347 (49%), Gaps = 44/347 (12%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 271
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 241 QLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + +++ + L +P+Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 307 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAE 366
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRW 346
LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W
Sbjct: 367 LIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLRFGDVVHFMELW 412
>gi|302803362|ref|XP_002983434.1| hypothetical protein SELMODRAFT_422724 [Selaginella moellendorffii]
gi|300148677|gb|EFJ15335.1| hypothetical protein SELMODRAFT_422724 [Selaginella moellendorffii]
Length = 624
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/340 (33%), Positives = 180/340 (52%), Gaps = 39/340 (11%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEE-SSGPQWMKWE 61
ML LPFLTR F+AKI+ T A +G+L+M+EL+ + ++ + YGA + P++ + E
Sbjct: 120 MLALPFLTRNPDFTAKIFATYPTATVGKLLMQELVSSHRDFLKLYGASSLENHPEFTQCE 179
Query: 62 ELELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAF 119
+P AL+ LGE S + V C+ ++QTLR+GEEA +G +++ +
Sbjct: 180 ----VPEALKDCLLGEHNSGILNWHKLYSAEDVLGCMERIQTLRYGEEAPIDGCVVLTPY 235
Query: 120 SSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDF--DYRAIQGSDLILYSDLSSLDST 177
SSG IGA NW+I G ++ Y+S + A+ A D ++ GS ++L S S
Sbjct: 236 SSGQGIGASNWVIKGPCSSVTYVSSCDVAAAAASCASQDLTSLDGSQVLLVSAKQPTSSV 295
Query: 178 EDIDQSS-------------------FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSC 218
E ++ + F +N + NS+ + ++ LA + +
Sbjct: 296 EKLEMDTEAEPRSRLTTRPWVNARVEFITSHNAKPRMANSVLSEKREPQQRSLLAQVANA 355
Query: 219 AIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPE 278
A D++ GGSVLIP + L A C S I+ +S A+E LA+TNT+PE
Sbjct: 356 AADALSKGGSVLIPTSVSDTVL------ARSFLCKS----IFYVSPSAQEFLAFTNTVPE 405
Query: 279 WLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLL 318
WL RQEKL++G+ LF HV+L+KE K+ FP++ SP+++
Sbjct: 406 WLSSSRQEKLYNGESLFGHVELLKEGKLSHFPSL-SPEVV 444
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 20/188 (10%)
Query: 393 LLKILQPKLVLFPEEWRTHVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKF 452
L+ LQPK + PE ++ V+ S + + IPSL+E +E++AD+AS+
Sbjct: 452 LIDRLQPKFAVVPERLKSVVT---------SDCAHRAPLKIPSLEEELNMELSADLASRI 502
Query: 453 QWRMLKQ-KKLNITRLKGRLFVNHGKHQLLPENEPGGSSQTR-PFLHWGSPDPENLLAEL 510
+ + + + + RL + + G L P S + P G+PD + LL L
Sbjct: 503 KPKQTRSGNNVALARLSAEMHFHDGNFYL---EMPRVSRMIQTPQRFCGTPDVDALLRAL 559
Query: 511 SKMGINGSVERCMTDAESEDGFTVKVQD---PEKSMIEVRAAVTVISAADKNLASRIVKA 567
+ G+ V+ + AE DG V V + IE+ + T+I +D L + A
Sbjct: 560 REKGL---VDIQQSFAEQPDGSKVPVISVTFQTSASIELNGSETIIKTSDPVLRRLVADA 616
Query: 568 MENILEGI 575
+ + L+ I
Sbjct: 617 VISCLQII 624
>gi|297299164|ref|XP_001111495.2| PREDICTED: integrator complex subunit 9-like [Macaca mulatta]
gi|221041112|dbj|BAH12233.1| unnamed protein product [Homo sapiens]
Length = 503
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 121/473 (25%), Positives = 221/473 (46%), Gaps = 51/473 (10%)
Query: 86 CPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGS 145
C + V +SK+Q + + ++ G + + SSG +G+ NWII ++Y+SGS
Sbjct: 26 CYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLSSGYALGSSNWIIQSHYEKVSYVSGS 85
Query: 146 NFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDES 205
+ + H D +++ SD+++ + L+ + + +N D
Sbjct: 86 SLLTTHPQPMDQASLKNSDVLVLTGLTQIPT-----------------------ANPDGM 122
Query: 206 VEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISS 264
V E CS +V+ GG+VL+P GV LLE + +++ + L +P+Y IS
Sbjct: 123 VGEF------CSNLALTVRNGGNVLVPCYPSGVIYDLLECLYQYIDSAGLSSVPLYFISP 176
Query: 265 VAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEP 324
VA L ++ EWLC +Q K++ +P F H +LI+ K+ +P++H ++++P
Sbjct: 177 VANSSLEFSQIFAEWLCHNKQSKVYLPEPPFPHAELIQTNKLKHYPSIHG-DFSNDFRQP 235
Query: 325 CIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLENEVDAELAVLPFKPISMKVLQCSFLS 383
C+VF+ H SLR G +H + W N+++ E + A+ P++P++MK + C +
Sbjct: 236 CVVFTGHPSLRFGDVVHFMELWGKSSLNTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDT 295
Query: 384 GKKLQKVQPLLKILQPKLVLFPEEW------RTHVS--FSDVTSFSVSHYSENETIHIPS 435
+V LLK +QP V+ PE++ ++H D ++S Y E + +P
Sbjct: 296 RLNFIQVSKLLKEVQPLHVVCPEQYTQPPPAQSHRMDLMIDCQPPAMS-YRRAEVLALPF 354
Query: 436 LKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQLLPENEPG--GSSQTR 493
+ ++EI ++A +K +++ + L KH L P P S + R
Sbjct: 355 KRRYEKIEIMPELADSLVPMEIK-PGISLATVSAVLHTKDNKHLLQPPPRPAQPTSGKKR 413
Query: 494 PFLHWGSPDPENLLAELSKMGINGS--VERCMTDAESEDGFTVKVQDPEKSMI 544
+ PD ++ K ++GS VE+ + E +KV+D K I
Sbjct: 414 KRVSDDVPD-----CKVLKPLLSGSIPVEQFVQTLEKHGFSDIKVEDTAKGHI 461
>gi|426359249|ref|XP_004046894.1| PREDICTED: integrator complex subunit 9 [Gorilla gorilla gorilla]
Length = 682
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 145/582 (24%), Positives = 256/582 (43%), Gaps = 88/582 (15%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W +
Sbjct: 107 MMALPYITEHTGFTGTVYATEPTVQIGRLLMEELV--NFIERV---PKAQSASLWKNKDI 161
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
LLPS L+ D E+ C + V +SK+Q + + ++ G + + S
Sbjct: 162 QRLLPSPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLS 215
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 216 SGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLVLTGLTQIPT---- 271
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D V E CS +V+ GG+VL+P GV
Sbjct: 272 -------------------ANPDGMVGEF------CSNLALTVRNGGNVLVPCYPSGVIY 306
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQE------------- 286
LLE + +++ + L +P+Y IS VA L ++ EW +R
Sbjct: 307 DLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQIFAEWYFIKRMSVQLADYLEGTWEF 366
Query: 287 KLFSGDPLFAHVK-----------LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLR 335
+ SG + K LI+ K+ +P++H ++++PC+VF+ H SLR
Sbjct: 367 DVCSGISIHIPSKHATADEDLQDSLIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSLR 425
Query: 336 LGPTIHLLRRWSGDH-NSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLL 394
G +H + W N+++ E + A+ P++P++MK + C + +V LL
Sbjct: 426 FGDVVHFMELWGKSSLNTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLL 485
Query: 395 KILQPKLVLFPEEW------RTHVS--FSDVTSFSVSHYSENETIHIPSLKESAELEIAA 446
K +QP V+ PE++ ++H D ++S Y E + +P + ++EI
Sbjct: 486 KEVQPLHVVCPEQYTQPPPAQSHRMDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIMP 544
Query: 447 DIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDPE 504
++A +K +++ + L KH L P P S + R + PD
Sbjct: 545 ELADSLVPMEIK-PGISLATVSAVLHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD-- 601
Query: 505 NLLAELSKMGINGS--VERCMTDAESEDGFTVKVQDPEKSMI 544
++ K ++GS VE+ + E +KV+D K I
Sbjct: 602 ---CKVLKPLLSGSIPVEQFVQTLEKHGFSDIKVEDTAKGHI 640
>gi|320163036|gb|EFW39935.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 642
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 130/495 (26%), Positives = 217/495 (43%), Gaps = 64/495 (12%)
Query: 2 GMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELI-CMNMEYRQF-YGAEESSGPQWMK 59
M LPF+T F+ ++Y T+A +L+MEE + C+ + Q YG+ S+G
Sbjct: 95 AMQALPFVTERTAFAGRVYATDATVPFARLLMEETMRCVTKHFVQSGYGSSWSTG----- 149
Query: 60 WEELELLPSALRKIALGEDGSELGGGCPC---IAHVKDCISKVQTLRFGEEACYNGILII 116
A A L C +A ++ CISK+ L F + + I
Sbjct: 150 --------RAHAATATEHFDITLPAFCASWYSLAELESCISKIHRLSFNQRVNLYNLCDI 201
Query: 117 KAFSSGLDIGACNWIISGAKGNIAYISGSNFASG--HAMDFDYRAIQGSDLILYSDLSSL 174
SSG IG CNW+I + Y++ ++ S HA FD L+ ++S
Sbjct: 202 IPTSSGFGIGCCNWVIETPTERVFYMAATSLPSSQFHAQAFDMSP-------LHLGVASE 254
Query: 175 DSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPIN 234
D ++ S + ++ L+ + N + + +CS + S++ GG+VL+P
Sbjct: 255 DPLSNLPPRSIMAPGSKFDVLVVADLNPAAPLPYSDATQKVCSTIVHSLQQGGNVLLPCT 314
Query: 235 RVGV-FLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGD 292
V L+L+E + + ++L ++PIY++S A +A+ N + EWL +RQE+++ +
Sbjct: 315 PASVATLELIEAVHHTLIAANLARVPIYLVSPEANAAVAFANIMSEWLASERQEQVYLPE 374
Query: 293 PLFAHVKLIKEKKIH------------VFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 340
F HV+ I +K+H PAV P + + Q CIV + H SLR G +
Sbjct: 375 NPFPHVEWIDSQKLHQVATVAASVRSLTTPAV--PAVFLQRQ--CIVLASHPSLRFGDAL 430
Query: 341 HLLRRWSGDHNSLLVLEN-EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQP 399
H LR W D ++ +L + E + PF+P+ M V V LLK ++P
Sbjct: 431 HFLRLWGNDSRNMTILTDPSYQPEDLLQPFQPLQMAVSYIPLDRRLATSDVGSLLKNVRP 490
Query: 400 KLV------LFPEEWRTHVSFSDVTS------------FSVSHYSENETIHIPSLKESAE 441
L+ L P + + D+TS +V +TI +PS
Sbjct: 491 DLIPSNIVLLLPGKSDQRSAIYDLTSDLEQNFHAALSPPAVHILEHGDTIRMPSTNRDCR 550
Query: 442 LEIAADIASKFQWRM 456
L+++ +AS RM
Sbjct: 551 LQVSHQLASSIIPRM 565
>gi|312074711|ref|XP_003140092.1| hypothetical protein LOAG_04507 [Loa loa]
gi|307764740|gb|EFO23974.1| hypothetical protein LOAG_04507 [Loa loa]
Length = 575
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 131/525 (24%), Positives = 226/525 (43%), Gaps = 70/525 (13%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQW-MK 59
M +L LPF T FS IY T+ ++G+L+MEEL+ F+ + +W
Sbjct: 101 MSLLALPFFTEETNFSGVIYATDPTLQLGRLVMEELL-------DFFDRVDRE--EWDYS 151
Query: 60 WEELELLPSALRKIALGEDGSELGGGCPCIA--HVKDCISKVQTLRFGEEACYNGILIIK 117
W++ L S A D E P + +++C++KVQ + F E +G +
Sbjct: 152 WKKPGLFMSFPNVPA--SDPREWR---PFYSREQMENCLAKVQRVSFREPINIHGAATVA 206
Query: 118 AFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDST 177
A+SSG IG+CNWI+ I Y+S ++ + H + ++G D ++
Sbjct: 207 AYSSGYSIGSCNWIVRTEHEKIGYLSATSSRNSHTKPVQWDQLRGCDALI---------- 256
Query: 178 EDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVG 237
+ S+ + E E A D++K GSVL+PI G
Sbjct: 257 ------------------LTSICRFPEHSPETSVCHAFAVIA-DTLKRNGSVLMPICPTG 297
Query: 238 VFLQLLEQIAIFMECSSL--KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLF 295
V LLE I++ ++ + +P+Y IS VAE LAY+N EWL +++Q + + F
Sbjct: 298 VLYDLLEVISMQLDQHDVPVDVPVYFISPVAESTLAYSNIYAEWLSEKKQNMVNIPEEPF 357
Query: 296 AHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLL 354
H + ++ V+ ++ + PC++F+ H SLR+G +H L W D N+L+
Sbjct: 358 KHGLTTRNGRLKVYDNIYG-DFCRQMRTPCVIFTGHPSLRIGNAVHFLEMWGNDSKNALI 416
Query: 355 VLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQP-LLKILQPKLVLFPEEWRTHVS 413
+ + + + P++ +S++ + ++ P +L L PKL++ PE R
Sbjct: 417 MTDPDYPIQNVYGPYEKLSIRAFFFPIETRLDFSQLNPSILPDLAPKLLVMPENARATFR 476
Query: 414 FSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLK-QKKLNITRLKGRLF 472
+ D T IPS ++ + + D + + + ++ LKG L
Sbjct: 477 YGD-------------TFTIPSTTKTKRVRLHPDTLRTIELHGHRDHSDIGLSSLKGVLS 523
Query: 473 VNHGKHQLLPENEPGGSSQTRPFLHWGSPDPENLLAELSKMGING 517
V +L P+ + LH PE L K G+ G
Sbjct: 524 VYDNILELNPDTGTKIRNVCVGKLH-----PEIFAQTLGKFGLRG 563
>gi|115451851|ref|NP_001049526.1| Os03g0243200 [Oryza sativa Japonica Group]
gi|113547997|dbj|BAF11440.1| Os03g0243200 [Oryza sativa Japonica Group]
Length = 233
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 122/183 (66%), Gaps = 17/183 (9%)
Query: 91 HVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASG 150
++++C+ K Q +++GEE C+NG+L++KA SSGL++G C W I G + ++ Y+ S F S
Sbjct: 38 NIEECMQKTQYVKYGEEVCFNGMLMLKASSSGLELGNCVWTIKGPRASMTYLPSSIFVSA 97
Query: 151 HAMDFDYRAIQGSDLILYSDLSSLDSTED---------IDQ--------SSFSDDNNNWE 193
HA+DFDY +++G+D+IL+SD SSL+ D +D+ S F DD + +
Sbjct: 98 HALDFDYSSLKGNDVILFSDFSSLNGMYDDNKKMGEHIVDETDILLASNSVFRDDGMDED 157
Query: 194 ELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECS 253
E + L + D+ EE+E+++FICSC ID++ +GGSVLIPI R+G+ L LLE ++ + S
Sbjct: 158 ETIKFLCSNDDIAEEIERISFICSCIIDAINSGGSVLIPIGRIGIILLLLEHMSETLHSS 217
Query: 254 SLK 256
++K
Sbjct: 218 NMK 220
>gi|66811780|ref|XP_640069.1| integrator complex subunit 9 [Dictyostelium discoideum AX4]
gi|74855024|sp|Q54SH0.1|INT9_DICDI RecName: Full=Integrator complex subunit 9 homolog
gi|60468086|gb|EAL66096.1| integrator complex subunit 9 [Dictyostelium discoideum AX4]
Length = 712
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 202/427 (47%), Gaps = 56/427 (13%)
Query: 2 GMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMK-W 60
+ LPF+T F KIY TE +IG+L++EEL+ M+ +Y ++ W
Sbjct: 127 NIYALPFITEYTNFQGKIYATEPTVQIGKLLLEELVQMDKQYSNSSINNNNNNNNLSDCW 186
Query: 61 EELELLPS------ALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGIL 114
+ +E+L + L D I ++ K+Q++RF E + G
Sbjct: 187 QNIEILEKLNVHNVGMENENLYRDSYRWKDLYKKID-IEKSFEKIQSIRFNESIKHYGFE 245
Query: 115 IIKAFSSGLDIGACNWIISGAKG--NIAYISGSNFA-SGHAMDFDYRAIQGSDLILYSDL 171
I + SSG +G+ NW+I +KG + YIS S+ + S + F I D+++ S +
Sbjct: 246 CIPS-SSGYGLGSANWVIE-SKGFERVVYISDSSLSLSRYPTPFQLSPIDNPDVLILSKI 303
Query: 172 SSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLI 231
+ NN +++++ L CS +++ GG+VLI
Sbjct: 304 NHY-------------PNNPPDQMLSEL----------------CSNIGSTLQQGGTVLI 334
Query: 232 PINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFS 290
P G+ L L E +A ++ L +PIY +SSV++ +L+Y + EWL K +QE+ F
Sbjct: 335 PSYSCGIILDLFEHLADYLNKVGLPYVPIYFVSSVSKAVLSYADIYSEWLNKSKQERAFM 394
Query: 291 GDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQ--EPCIVFSPHWSLRLGPTIHLLRRWSG 348
+ F H L+++ + + VHS N+Q +PCI+F+ H S R+G L++ +
Sbjct: 395 PETPFLHQDLMRKGQFQAYQHVHS-----NFQANDPCIIFTGHPSCRIGDITTLIKLYDN 449
Query: 349 DHNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGK---KLQKVQPLLKILQPKLVLFP 405
NS+L++E + D + VLPF S ++ + FL + L+ L PK ++ P
Sbjct: 450 PKNSILLIEPDFDFKSTVLPF---SKQISRIQFLPIDPRINFNEANLLISKLSPKHLIIP 506
Query: 406 EEWRTHV 412
++ +V
Sbjct: 507 RIYKNYV 513
>gi|330846631|ref|XP_003295119.1| hypothetical protein DICPUDRAFT_160278 [Dictyostelium purpureum]
gi|325074250|gb|EGC28355.1| hypothetical protein DICPUDRAFT_160278 [Dictyostelium purpureum]
Length = 717
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 203/427 (47%), Gaps = 56/427 (13%)
Query: 2 GMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWE 61
+ LPF+T F KI+ TE +IG+L++EEL+ M+ +Y ++ + KW+
Sbjct: 108 NIYSLPFITEYTNFQGKIFATEPTVQIGKLLLEELVQMDKQYSNHNYNINNNNNLFDKWQ 167
Query: 62 ELELLPSALRKIALGEDGSELGGGCPCIAHVKD---------CISKVQTLRFGEEACYNG 112
E+L KI + G+E KD K+QT+RF E + G
Sbjct: 168 NREML----TKINIANYGNENEIMYKDSYRWKDLYKKLDIEKSFEKIQTVRFNESIYFYG 223
Query: 113 ILIIKAFSSGLDIGACNWIISGAKG--NIAYISGSNFA-SGHAMDFDYRAIQGSDLILYS 169
A SSG +G+CNW+I AKG + Y+S ++ + S + F ++ D+++ S
Sbjct: 224 -FECSAVSSGFCLGSCNWVIE-AKGFERMVYMSDTSLSVSRYPTVFQMEPLEKPDILILS 281
Query: 170 DLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDS-VKAGGS 228
L NN+ L DE E+ S +I S +++GG+
Sbjct: 282 KL-----------------NNHPINLP------DEMFTEL-------SLSIGSTLQSGGN 311
Query: 229 VLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEK 287
V+IP G+ L LLE +A ++ +L IY ISSV++ +L+Y + EWL K +QE+
Sbjct: 312 VIIPSYSCGIILDLLEHLAEYLNQMNLASTQIYFISSVSKAVLSYADIYAEWLNKNKQER 371
Query: 288 LFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWS 347
F + F H L+K+ ++ F +HS EPCI+F+ H S R G L++++
Sbjct: 372 SFMPETPFLHQDLMKKGQLAAFQHIHSH---FQTSEPCIIFAGHPSCRFGDVTTLIKQY- 427
Query: 348 GDH--NSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFP 405
GD+ N++ ++E + D + VLPF ++ K + L+ L PK ++ P
Sbjct: 428 GDNPKNTVFLIEPDFDFKTLVLPFSKLTCKFQSIPIDPRINFKDANFLISKLAPKHLIIP 487
Query: 406 EEWRTHV 412
++ +
Sbjct: 488 NNFKNFI 494
>gi|47222695|emb|CAG00129.1| unnamed protein product [Tetraodon nigroviridis]
Length = 713
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 169/347 (48%), Gaps = 44/347 (12%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
M+ LP++T GF+ +Y TE +IG+L+MEEL+ N R + S W E
Sbjct: 104 MMALPYITEHTGFTGTVYATEPTLQIGRLLMEELV--NFMERV---PKAQSATCWKNKEI 158
Query: 63 LELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
+LP L+ D ++ C + V +S+VQ + + ++ G + + S
Sbjct: 159 QRMLPGCLK------DAVDVWTWKRCYSMQEVNSALSRVQLVGYSQKVELFGAVQVSPLS 212
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDI 180
SG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 213 SGYSLGSSNWIIQSHHEKVSYVSGSSLLTTHPQPMDQSSLKNSDVLILTGLTQMPT---- 268
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+N D + E CS +++AGG+VL+P GV
Sbjct: 269 -------------------ANPDGMLGEF------CSNLAMTIRAGGNVLVPCYSSGVIY 303
Query: 241 QLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVK 299
LLE + F+E ++L P Y IS VA L ++ EWLC +Q K++ +P F H +
Sbjct: 304 DLLECLYQFIESANLGTTPFYFISPVANSSLEFSQIFAEWLCNNKQSKVYLPEPPFPHAE 363
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRW 346
LI+ K+ +P++H +++PC+VF+ H SLR G +H + W
Sbjct: 364 LIQTNKLKHYPSIHG-DFSSEFRQPCVVFTGHPSLRFGDVVHFMELW 409
>gi|355696337|gb|AES00306.1| integrator complex subunit 9 [Mustela putorius furo]
Length = 298
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 151/299 (50%), Gaps = 32/299 (10%)
Query: 112 GILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDL 171
G + + SSG +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L
Sbjct: 4 GAVQVTPLSSGYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQASLKNSDVLILTGL 63
Query: 172 SSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLI 231
+ + + +N D V E CS +V+ GG+VL+
Sbjct: 64 TQIPT-----------------------ANPDGMVGEF------CSNLALTVRNGGNVLV 94
Query: 232 PINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFS 290
P GV LLE + +++ + L IP Y IS VA L ++ EWLC +Q K++
Sbjct: 95 PCYPSGVIYDLLECLYQYIDSAGLSNIPFYFISPVANSSLEFSQIFAEWLCHNKQTKVYL 154
Query: 291 GDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH 350
+P F H +LI+ K+ +P++H ++++PC+VF+ H SLR G +H + W
Sbjct: 155 PEPPFPHAELIQTNKLKHYPSLHG-DFSSDFRQPCVVFTGHPSLRFGDVVHFMELWGKSS 213
Query: 351 -NSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 408
N+++ E + A+ P++P++MK + C + +V LLK +QP V+ PE++
Sbjct: 214 LNTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQY 272
>gi|340385075|ref|XP_003391036.1| PREDICTED: integrator complex subunit 9-like [Amphimedon
queenslandica]
Length = 398
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 156/319 (48%), Gaps = 32/319 (10%)
Query: 92 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 151
+ IS VQ + +G++ G + A SSG +G+CNW++ I Y+S S+ + H
Sbjct: 50 ITSAISIVQGISYGQKLDLFGSVQATALSSGYCLGSCNWLMETKYSKIGYVSSSSTFTTH 109
Query: 152 AMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEK 211
+ +++ D ++ S L++ S +N D + E+
Sbjct: 110 PCPMERQSLLSCDALILSSLTNAPS-----------------------ANPDTMLGEL-- 144
Query: 212 LAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELL 270
C+ +++ GG+VLIP GV LLE + F++ + L +P+Y+IS VA+ L
Sbjct: 145 ----CTKMATTLRGGGNVLIPCYPTGVVYDLLECLHTFLDNAGLVGVPVYMISPVAKNSL 200
Query: 271 AYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSP 330
+ N EWLC+ +Q K++ + F H + IK ++ FP ++ L +Q PC+VF+
Sbjct: 201 SLANIYAEWLCEAKQSKVYQPEHPFPHAEFIKSGRLKHFPNIYG-DLGNVYQTPCVVFAG 259
Query: 331 HWSLRLGPTIHLLRRW-SGDHNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQK 389
H SLR G +H + W S NS++ E D A+ P++P++MK
Sbjct: 260 HPSLRCGDAVHFMEVWGSSSKNSVIFTEPGFDYLHALTPYQPLNMKAFYFPIDPCMNFFV 319
Query: 390 VQPLLKILQPKLVLFPEEW 408
LLK LQP++++ P ++
Sbjct: 320 ANKLLKELQPQVLITPTDY 338
>gi|281209154|gb|EFA83329.1| integrator complex subunit 9 [Polysphondylium pallidum PN500]
Length = 666
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 130/546 (23%), Positives = 247/546 (45%), Gaps = 88/546 (16%)
Query: 2 GMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWE 61
+ LPF+T F KIY TE + G+L+++EL+ ++ ++S + W+
Sbjct: 112 NIYALPFITEYTSFKGKIYATEPTLQYGRLLLDELVQID---------KQSKTTRNQYWQ 162
Query: 62 ELELLPSALRKIALGEDGSELGGGC---PCIAH--VKDCISKVQTLRFGEEACYNGILII 116
++LL ++I + + H + C K+QT+RF E + G I
Sbjct: 163 SIDLL----KQIGAAQSNNVFKYAYYWRDLYNHHDTEKCFEKIQTVRFNEYLKFYG-FTI 217
Query: 117 KAFSSGLDIGACNWIISGAKGNIAYIS-GSNFASGHAMDFDYRAIQGSDLILYSDLSSLD 175
+A SSG +G NWI+ I Y+S SN+ + + FD ++++ +DL++ + L
Sbjct: 218 RAVSSGYCLGGSNWIVENNYEKIVYLSDSSNYNTRYPEPFDRQSLRNADLVIATKL---- 273
Query: 176 STEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINR 235
N + + +A + S ++ +GG+VLIP
Sbjct: 274 -------------------------NVYPQITLNDAIAELFSNIGSTLSSGGNVLIPTYS 308
Query: 236 VGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL 294
G L LLE ++ ++ L + IY IS +A+ +L+Y + EWL + ++E+ + +
Sbjct: 309 CGTILDLLEPLSEYLSKVGLGFVHIYFISQIAKAVLSYADIYSEWLNRAKKERSYMPEAP 368
Query: 295 FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH--NS 352
F H +I+ + H P H +E IVF H S R+G +H++ W GD+ NS
Sbjct: 369 FLHQDMIRNQ--HFTPVTHITSRFQP-KEGSIVFVGHPSCRVGDVVHMINIW-GDNPKNS 424
Query: 353 LLVLENEVDAELAVLPFKPISMKVLQC--SFL---SGKKLQKVQPLLKILQPKLVLFPEE 407
+L++E E D + + PF + LQC F+ S ++ L+ + P ++
Sbjct: 425 ILLIEPEYDFKKTLQPFN----QQLQCRIQFIPIDSRFSTNEMNDLIMEISPSTLI---- 476
Query: 408 WRTHVSFSDVTSFSVSHYSENETIH-----IPSLKESAELE-----IAADIASKFQWRML 457
T ++++ S SE T + I +K+S++ + +A + Q ++L
Sbjct: 477 --TSYQYTNIIKNKQSSGSEGNTTYMNPNDIVKIKQSSKKRYENGHLDKTLAQQIQPKLL 534
Query: 458 ---KQKKLNITRLKGRLFVNHGKHQLLPENEPGGSSQTR---PFLHWGSPDPENLLAELS 511
+ +++ +++ L ++ K+ L N SS + +L WGS +N++ ++
Sbjct: 535 VDNGENSVSVAQIEAVLSLSDHKYHLTNPNISDLSSLSHWKEKYL-WGSLSIQNIIKQIY 593
Query: 512 KMGING 517
+ G N
Sbjct: 594 QKGYNN 599
>gi|357456771|ref|XP_003598666.1| Integrator complex subunit [Medicago truncatula]
gi|355487714|gb|AES68917.1| Integrator complex subunit [Medicago truncatula]
Length = 268
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 75/87 (86%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
MG++GLP+LTR +GFSAKIY+TEA+ARIGQLMME+L+ M+ E+RQFYG EES+ P W++
Sbjct: 179 MGIMGLPYLTRQKGFSAKIYVTEASARIGQLMMEDLVSMHAEFRQFYGPEESNFPPWLRQ 238
Query: 61 EELELLPSALRKIALGEDGSELGGGCP 87
EELE+LPS L++I +G+DG ELGG P
Sbjct: 239 EELEILPSVLKEILVGKDGVELGGWMP 265
>gi|1930149|gb|AAB67601.1| unknown protein CIT987SK_2A8_1 [Homo sapiens]
Length = 409
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 167/343 (48%), Gaps = 22/343 (6%)
Query: 216 CSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTN 274
CS +V+ GG+VL+P GV LLE + +++ + L +P+Y IS VA L ++
Sbjct: 33 CSNLALTVRNGGNVLVPCYPSGVIYDLLECLYQYIDSAGLSSVPLYFISPVANSSLEFSQ 92
Query: 275 TIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSL 334
EWLC +Q K++ +P F H +LI+ K+ +P++H ++++PC+VF+ H SL
Sbjct: 93 IFAEWLCHNKQSKVYLPEPPFPHAELIQTNKLKHYPSIHG-DFSNDFRQPCVVFTGHPSL 151
Query: 335 RLGPTIHLLRRWSGDH-NSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPL 393
R G +H + W N+++ E + A+ P++P++MK + C + +V L
Sbjct: 152 RFGDVVHFMELWGKSSLNTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKL 211
Query: 394 LKILQPKLVLFPEEW------RTHVS--FSDVTSFSVSHYSENETIHIPSLKESAELEIA 445
LK +QP V+ PE++ ++H D ++S Y E + +P + ++EI
Sbjct: 212 LKEVQPLHVVCPEQYTQPPPAQSHRMDLMIDCQPPAMS-YRRAEVLALPFKRRYEKIEIM 270
Query: 446 ADIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQLLPENEPG--GSSQTRPFLHWGSPDP 503
++A +K +++ + L KH L P P S + R + PD
Sbjct: 271 PELADSLVPMEIK-PGISLATVSAVLHTKDNKHLLQPPPRPAQPTSGKKRKRVSDDVPD- 328
Query: 504 ENLLAELSKMGINGS--VERCMTDAESEDGFTVKVQDPEKSMI 544
++ K ++GS VE+ + E +KV+D K I
Sbjct: 329 ----CKVLKPLLSGSIPVEQFVQTLEKHGFSDIKVEDTAKGHI 367
>gi|268555430|ref|XP_002635704.1| Hypothetical protein CBG22443 [Caenorhabditis briggsae]
Length = 644
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 117/501 (23%), Positives = 219/501 (43%), Gaps = 61/501 (12%)
Query: 2 GMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWE 61
+GLPF T GFS KIY TE A + G+L+MEE+ +E+ + A W K E
Sbjct: 97 NFIGLPFYTENTGFSGKIYATEIAFQYGKLLMEEM----LEFMERIEARPDDA-TWKKEE 151
Query: 62 ELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS 121
+ P+A + A + C++KV TL F + + + S
Sbjct: 152 ICQKFPNAPSMNPMT------WASFYKAADMHRCLTKVITLSFNQTIELFRVKVT-PIVS 204
Query: 122 GLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDID 181
G G+ NWI I Y++ SN S D + ++ L SD+ L
Sbjct: 205 GHTYGSANWIFETENEKIGYLTASNPIST-----DVKPMEIGPL--RSDIDYL------- 250
Query: 182 QSSFSDDNNNWEELMNSLSNY-DESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
++NS+S D S + M + D +K GSV++PI VG
Sbjct: 251 -------------IINSMSRLIDTSTQTMG--VSLTRTVTDYLKNHGSVILPICPVGPIF 295
Query: 241 QLLEQIAIFMECS---SLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAH 297
+++E I+ + + S PIY+IS VA+ +A + EW+ + RQ+ ++ + + H
Sbjct: 296 EMIEAISDIISSTTGISPDTPIYLISPVAKSAIAMASISAEWMSESRQKAVYLPEEPYYH 355
Query: 298 VKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVL 356
+ IK ++ ++ +++ ++ PC++ + H SLR+G H++ D N++++
Sbjct: 356 SQFIKSGRLRIYESLYG-NFSKEFKTPCVILASHPSLRVGDAAHMIEVLGSDPKNAVIIT 414
Query: 357 ENEVDAELAVLPFKPISMKVL------QCSFLS-GKKLQKVQPLLKILQPKLVLFPEEWR 409
++++ E PF+ + +K + + F + K LQ+ +P ++ P P R
Sbjct: 415 DSDLPCEEVREPFRNLPIKFINIPMDFRMDFATLDKNLQEWKPKASVICPSAYSQPVLNR 474
Query: 410 THVSFSDVTSFSVSHYSENETIHIPSL----KESAELEIAADIASKFQWRMLKQKKLNIT 465
+ + + + NET+ + + ++ + + D+ +++ KKL I
Sbjct: 475 PDLKITYENLWPIKF---NETVKLWKMTRDQTKTVTVSVHPDVVRDLRFKQHPTKKLAIA 531
Query: 466 RLKGRLFVNHGKHQLLPENEP 486
+ L + +L+P N P
Sbjct: 532 SVACNLSAYNDDFKLVPSNYP 552
>gi|17559896|ref|NP_504953.1| Protein F19F10.12 [Caenorhabditis elegans]
gi|373219402|emb|CCD67763.1| Protein F19F10.12 [Caenorhabditis elegans]
Length = 646
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 180/416 (43%), Gaps = 66/416 (15%)
Query: 2 GMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWE 61
+GLPF T GFS KIY+TE A + G+L+MEE++ +F E P KW+
Sbjct: 100 SFVGLPFYTEGSGFSGKIYVTEIAYQYGKLLMEEML-------EFISRIEVL-PSDKKWK 151
Query: 62 ELELL----------PSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYN 111
E P R D + C++KV TL F +
Sbjct: 152 REEFCGKFPNPPFQNPVEWRPYYTTTD-------------MHSCLAKVITLSFNQTIDLF 198
Query: 112 GILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDL 171
I + S G G+ W I AY+S SN ++ + ++ D IL + L
Sbjct: 199 RIKVTPVVS-GHTYGSAYWTIKTENEQFAYLSASNPSATDVKLMETAPLRAVDHILVTSL 257
Query: 172 SSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLI 231
S L +D ++ +E+ SL D +K GSVL+
Sbjct: 258 SRL-----VDTTA--------KEMGYSL----------------IKTITDVLKKHGSVLL 288
Query: 232 PINRVGVFLQLLEQIAIFMECSS---LKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKL 288
PI VG +++E ++ + ++ L PIY IS VA+ +A + EW+ + RQ +
Sbjct: 289 PICPVGPIFEMIEAVSDIITTTNGIPLDTPIYFISPVAKSAIAMASISAEWMSESRQNAV 348
Query: 289 FSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSG 348
+ + ++H LIK ++ ++ +++ ++ PC++F+ H SLR+G H++
Sbjct: 349 YLPEEPYSHSNLIKSGRVKIYDSLYG-SFSKEFKTPCVIFASHASLRIGDAAHMVEVLGS 407
Query: 349 D-HNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVL 403
D N+++V + ++ E PF+ + +K + ++ LL +PK VL
Sbjct: 408 DPKNAVIVTDPDLPCEDVREPFRNLPIKFINIPMDFRMDFASLERLLADAKPKYVL 463
>gi|341901353|gb|EGT57288.1| hypothetical protein CAEBREN_20924 [Caenorhabditis brenneri]
Length = 648
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 180/407 (44%), Gaps = 48/407 (11%)
Query: 2 GMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWE 61
LGLPF T F+ KIY+TE A + G+L+MEE+ +E+ + A W K E
Sbjct: 100 SFLGLPFYTERSDFTGKIYVTEIAYQYGKLLMEEM----LEFMERIEARTEVN-NWKKEE 154
Query: 62 ELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS 121
P+ + + + C++KV TL F + I I S
Sbjct: 155 ICGKFPNPPFQNPMEWKPFYTA------QEMHSCLTKVVTLSFNQTIDLFRIKIT-PIVS 207
Query: 122 GLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDID 181
G G+ W + IAY+S SN + + ++ D IL + LS L
Sbjct: 208 GHSYGSAYWTLKTENEKIAYLSASNQNALDVKPMEIDPLRNVDYILATSLSRL------- 260
Query: 182 QSSFSDDNNNWEELMNSLSNYDESVEEM-EKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
D +V+ M +L S + +K+ GSVL+P+ VG
Sbjct: 261 --------------------VDTTVQAMGHRLIKEIS---EVLKSHGSVLLPMCPVGPIF 297
Query: 241 QLLEQIAIFMECS---SLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAH 297
+L+E ++ + + SL PIY IS +A+ +A+ + EW+ + R ++ + F+H
Sbjct: 298 ELIEAVSDLITSTNGISLDTPIYFISPMAKSAIAFASISAEWMAESRHNTVYVPEEPFSH 357
Query: 298 VKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVL 356
LI+ ++ ++ +++ ++ PC++F+ H SLR+G H++ D N+++V
Sbjct: 358 NHLIRSGRLKIYDSLYG-NFSKEFKTPCVIFASHASLRVGDAAHMVEVLGSDPKNAVIVT 416
Query: 357 ENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVL 403
+ ++ E PF+ + +K L ++ LL ++PK VL
Sbjct: 417 DPDLPCEDVREPFRTLPIKFLNIPMDFRMDFGSMERLLADVKPKYVL 463
>gi|341887733|gb|EGT43668.1| hypothetical protein CAEBREN_15431 [Caenorhabditis brenneri]
Length = 601
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 180/407 (44%), Gaps = 48/407 (11%)
Query: 2 GMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWE 61
LGLPF T F+ KIY+TE A + G+L+MEE+ +E+ + A W K E
Sbjct: 53 SFLGLPFYTERSDFTGKIYVTEIAYQYGKLLMEEM----LEFMERIEARTEVN-NWKKEE 107
Query: 62 ELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS 121
P+ + + + C++KV TL F + I I S
Sbjct: 108 ICGKFPNPPFQNPMEWKPFYTA------QEMHSCLTKVVTLSFNQTIDLFRIKIT-PIVS 160
Query: 122 GLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDID 181
G G+ W + IAY+S SN + + ++ D IL + LS L
Sbjct: 161 GHSYGSAYWTLKTENEKIAYLSASNQNALDVKPMEIDPLRNVDYILATSLSRL------- 213
Query: 182 QSSFSDDNNNWEELMNSLSNYDESVEEM-EKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
D +V+ M +L S + +K+ GSVL+P+ VG
Sbjct: 214 --------------------VDTTVQAMGHRLIKEIS---EVLKSHGSVLLPMCPVGPIF 250
Query: 241 QLLEQIAIFMECS---SLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAH 297
+L+E ++ + + SL PIY IS +A+ +A+ + EW+ + R ++ + F+H
Sbjct: 251 ELIEAVSDLITSTNGISLDTPIYFISPMAKSAIAFASISAEWMAESRHNTVYVPEEPFSH 310
Query: 298 VKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVL 356
LI+ ++ ++ +++ ++ PC++F+ H SLR+G H++ D N+++V
Sbjct: 311 NHLIRSGRLKIYDSLYG-NFSKEFKTPCVIFASHASLRVGDAAHMVEVLGSDPKNAVIVT 369
Query: 357 ENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVL 403
+ ++ E PF+ + +K L ++ LL ++PK VL
Sbjct: 370 DPDLPCEDVREPFRTLPIKFLNIPMDFRMDFGSMERLLADVKPKYVL 416
>gi|290984007|ref|XP_002674719.1| hypothetical protein NAEGRDRAFT_80530 [Naegleria gruberi]
gi|284088311|gb|EFC41975.1| hypothetical protein NAEGRDRAFT_80530 [Naegleria gruberi]
Length = 786
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 121/466 (25%), Positives = 205/466 (43%), Gaps = 84/466 (18%)
Query: 2 GMLGLPFLTRMEGFSAK-----------IYITEAAARIGQLMMEELICMNMEYRQFYGAE 50
+L LPFL + AK IY TE ++G+ MM+ELI +Q E
Sbjct: 111 NLLALPFLYQHLKEIAKDQNSDKVKMPTIYATEPTVQLGKKMMQELIAY---VKQSEHLE 167
Query: 51 ESSGPQWMKWEEL----ELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGE 106
S Q K EE +L P K D V + ++++ + E
Sbjct: 168 LSRASQIFKPEENIFMNKLSPLLSEKFIYSNDD------------VLRVVESMKSVSYQE 215
Query: 107 E-ACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASG----HAMDFDYRAI- 160
A + G+ I A SSG +G CNW+I I Y+S S+ SG H + D +
Sbjct: 216 RVAVFGGVFEISALSSGYSLGYCNWLIRTEYEKIFYVSHSS-RSGVQVRHPAEMDLSTVT 274
Query: 161 ---------QGSDLILYSDLS-SLDSTEDIDQSSFSDDNNN-------WEELMNSLSNYD 203
G+ + S +S S+ +T I + + N +++L ++L
Sbjct: 275 SIVQAPGSSSGTVATIQSGVSGSMVNTVMIVSNICPKSDRNLQYFEQVYQQLASTLGPIS 334
Query: 204 ES------VEEMEKLAFICS----------CAI--DSVKAGGSVLIPINRVGVFLQLLEQ 245
+S E ++ + +C C I ++++GG VLIP + G+ L++
Sbjct: 335 KSQLYAIDTENIKIVKPLCHYYPEATLNDICRIIGKTIESGGDVLIPCHTTGLIYDLIDF 394
Query: 246 IAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
++ F L IY++S VA+ + Y N EWLC + +K + + FAHV L++ K
Sbjct: 395 LSTFFNSVHLGNTLIYLVSPVADHAIQYANISAEWLCDSKMDKTLTAESPFAHVNLLQNK 454
Query: 305 KIHVFPAVHSPKLLMNWQ-----EPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 358
+ VF +V+S K + +Q PC++F+ H SLR+G + L+ + + +N+++++E
Sbjct: 455 SLVVFDSVNS-KFMSYYQSHRVSNPCVIFAGHPSLRMGDILQLIPIFQRNSNNAMIMIEP 513
Query: 359 EVDAELAVLPFKPI----SMKVLQCSFLSGKKLQKVQPLLKILQPK 400
E + PF P SMK + C K V ++K + P+
Sbjct: 514 EYSFLDTIEPFLPPPGQQSMKFIHCPIDLRLKNSDVVHMVKQVAPQ 559
>gi|308507445|ref|XP_003115906.1| hypothetical protein CRE_09329 [Caenorhabditis remanei]
gi|308250850|gb|EFO94802.1| hypothetical protein CRE_09329 [Caenorhabditis remanei]
Length = 421
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 163/365 (44%), Gaps = 66/365 (18%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
GLPF T GFS KIY+TE A + G+L+MEEL +E+ + A P+ KW++ E
Sbjct: 103 GLPFYTENTGFSGKIYVTEIAFQYGKLLMEEL----LEFMERIEAR----PEDKKWKKEE 154
Query: 65 LL----------PSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGIL 114
+ P+ R ED + C++KV TL F + I
Sbjct: 155 VCGKFSNPPFQNPAEWRPFYTTED-------------MHRCLTKVITLSFNQTIDIFRIK 201
Query: 115 IIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSL 174
I S G G+ W NIAY++ SN + + ++ D IL + LS L
Sbjct: 202 ITPVVS-GHTYGSAYWTFKTENENIAYLTASNPNATDVKLMEIAPLRSVDYILVTSLSRL 260
Query: 175 DSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPIN 234
D +V+ M + + +K GSV++P+
Sbjct: 261 ---------------------------IDTTVQAMG--VGLTRTITEVLKNHGSVILPMC 291
Query: 235 RVGVFLQLLEQIAIFMECS---SLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSG 291
+G +L+E ++ + + S+ PIY IS VA+ +A + EW+ + RQ ++
Sbjct: 292 PIGPIFELVEAVSDVISATPGISMDTPIYFISPVAKSAIAMASISAEWMSESRQNAVYLP 351
Query: 292 DPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-H 350
+ ++H +LI+ ++ ++ +++ ++ PCI+F+ H SLR+G H++ D
Sbjct: 352 EEPYSHNQLIRSGRLKIYDSLYG-NFSKEFRTPCIIFASHASLRVGDAAHMVEILGSDPR 410
Query: 351 NSLLV 355
N+++V
Sbjct: 411 NAVIV 415
>gi|428182657|gb|EKX51517.1| hypothetical protein GUITHDRAFT_161545 [Guillardia theta CCMP2712]
Length = 650
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 159/381 (41%), Gaps = 56/381 (14%)
Query: 3 MLGLPFLTRMEG-FSAKIYITEAAARIGQLMMEELI-CMNMEYRQFYGAEESSGPQWMKW 60
MLGLP+ T F + TE A IG+LMM EL ++ G E +W K
Sbjct: 107 MLGLPYFTEGSAKFQGTVIATEPTAEIGKLMMMELTQYISTSSFGSSGMSEGGEGEWYK- 165
Query: 61 EELELLPSALRKIALGEDGSELGGGC-PCIAH-VKDCISKVQTLRFGEEACYNGILIIKA 118
G E+G G P A V+ C+S+V+ L FG+ + I
Sbjct: 166 ---------------GPGSVEMGPGRDPYTAQQVESCMSRVKRLNFGQSLALSEGYAITP 210
Query: 119 FSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTE 178
+ SG +G+ W++S + +A I +M F R DS
Sbjct: 211 YPSGYCLGSSFWLLSKPQCKVALIGAC------SMGFPLRT---------PLPPRFDSLR 255
Query: 179 DIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGV 238
+++ + F D + + + + + I ++++ GG+VL+PI G
Sbjct: 256 NVNVAIFGDLLPSDRLVTPAGMSVTQPPPPAWPFRDIGQAIQNTLQKGGNVLMPITLGGT 315
Query: 239 FLQLLEQIAIF---MECSSLKIPIYIISSVAEELLAYTNTIPEWLCK---QRQEKLFSGD 292
L LLE ++++ S + PIY+IS A L+ Y + EW+ R+E+ D
Sbjct: 316 SLDLLEALSMWCPDFGVSGMNAPIYLISPTANSLIGYLEILSEWVQTFDATRREREGRID 375
Query: 293 PLFAHVKLIKEKKIHVFPAVHSPKLLM---------------NWQEPCIVFSPHWSLRLG 337
F H +++ ++H+ VH + ++EPC+V + H SLR G
Sbjct: 376 SPFVHQSMLQNSRLHIISDVHDLRSSSSSTTTTNMPTQPPTSTYREPCLVLAGHPSLRFG 435
Query: 338 PTIHLLRRWSGDHNSLLVLEN 358
P +H L+RW + L+L +
Sbjct: 436 PCLHFLKRWGQKAENALILTD 456
>gi|339232886|ref|XP_003381560.1| integrator complex subunit 9 [Trichinella spiralis]
gi|316979622|gb|EFV62386.1| integrator complex subunit 9 [Trichinella spiralis]
Length = 961
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 114/491 (23%), Positives = 185/491 (37%), Gaps = 89/491 (18%)
Query: 4 LGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEEL 63
L LPF+T F +Y TE + +M +++ + + +S P + +E++
Sbjct: 123 LALPFITERSEFQGTVYATEPTVEFARCLMLDMVTYFERAKSATHRKLTSAP-FYTFEDV 181
Query: 64 ELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGL 123
E +C+SKV + + E G + +SGL
Sbjct: 182 E-----------------------------NCLSKVNIVNYNETVICPGFGHLIPTASGL 212
Query: 124 DIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQS 183
IG CNWI+ Y+S S HA + I+ L
Sbjct: 213 SIGGCNWIV--------YLSSFTCVSTHAKAMAVDKFDNATAIVVGSL------------ 252
Query: 184 SFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLL 243
N N + DE C+ +++ GG+VLIP + GV L+
Sbjct: 253 -------NQYPKKNPATVMDE----------FCTVVANTIATGGNVLIPSSPCGVTFDLI 295
Query: 244 EQI-AIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLI 301
E + A + S L + IS A+ A+ N EWLC ++ ++F F H
Sbjct: 296 EYLFARVLSRSPLPNCQVIFISETADTCFAFGNICGEWLCDSKKCRVFQPQEPFVHGSFF 355
Query: 302 KEKKIHVFPAVHSPKLLMNW----------QEPCIVFSPHWSLRLGPTIH-LLRRWSGDH 350
K + +W + P IVF+ H SLR+G + LL +
Sbjct: 356 FLKSCKLMSRFACISTACSWWTCETDEINKRSPYIVFASHPSLRVGDAVQFLLLMKDNEK 415
Query: 351 NSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFP-EEWR 409
N++++ + E + P+KPISMKV C + LL LQPK + P +E
Sbjct: 416 NTIILTDPEFSPNEVLFPYKPISMKVAFCPIDVRMNTVEAVSLLSSLQPKALCLPIQEKN 475
Query: 410 THVSFSDVTSFSV-------SHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKL 462
T +F + + V +YS + IP ++++ +AS L K
Sbjct: 476 TVENFCNTSEIVVRFRRSNTRYYSTSNICPIPPDHRLVKIKLDPKLASAVTLIDLGCGK- 534
Query: 463 NITRLKGRLFV 473
+I R+ GRL +
Sbjct: 535 SIGRVAGRLIL 545
>gi|168047035|ref|XP_001775977.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672635|gb|EDQ59169.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 801
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 95/199 (47%), Gaps = 30/199 (15%)
Query: 3 MLGLPFLTRMEGFSAK---------------------------IYITEAAARIGQLMMEE 35
MLGLPFLT+ F K ++ T+A A IG++MMEE
Sbjct: 179 MLGLPFLTKHPDFCGKARINYPFVLNYMSLLELSKNSTRAEDSVFATKATAEIGRMMMEE 238
Query: 36 LICMNMEYRQFYGA-EESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAH--V 92
L+ M+ ++ Q +G + P W+ L LP +R +L S P + +
Sbjct: 239 LVSMHADFIQGHGTVKNGQKPPWLHPSVLSSLPENMRGTSLDRCFSNRANWQPLYSKDDI 298
Query: 93 KDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHA 152
K+C VQ + FGEE +NG+ I SSG+ IGA NWIISGA + Y++ S HA
Sbjct: 299 KNCFDHVQKMSFGEEINFNGVFKISPSSSGMGIGASNWIISGAIHRVGYVAASLAMKNHA 358
Query: 153 MDFDYRAIQGSDLILYSDL 171
M D ++G ++ SD+
Sbjct: 359 MPLDIAPLEGCHALIISDV 377
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 212 LAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELL 270
+A C I+++K GGSVL PI G+FL+LLE++ + ++LK IPI+ IS AEE+L
Sbjct: 496 VAAACKWTIEAIKRGGSVLFPIGPSGLFLELLEELGTQLGAANLKHIPIHYISPAAEEML 555
Query: 271 AYTNTIPEWLCKQRQEK 287
AY NT+PEWLC RQEK
Sbjct: 556 AYCNTVPEWLCSARQEK 572
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 107/227 (47%), Gaps = 11/227 (4%)
Query: 357 ENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSD 416
+ E D +L + P+ P++M+VL+ S + ++V +L+ +QP++ L PE + + +
Sbjct: 572 KKESDMDLLLAPYMPLAMQVLELPTSSRLRSKEVASVLQSVQPQVALVPEFIQKSLEGAR 631
Query: 417 VTSFSVS-HYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
++ V Y +I +P+ + E++++A++A Q + +K K + +
Sbjct: 632 SSNTKVILGYKNGRSIPVPNFEIELEVDMSAELALLVQPKPVKSKNVAAAPFQAGFCSRD 691
Query: 476 GKHQL-LPENEPGGSSQTRPFLH-WGSPDPENLLAELSKMGIN----GSVERCMTDAESE 529
G H L +P + + + + WG + L L + G++ ++ +T E
Sbjct: 692 GIHSLQIPTSSSNLVMSSHEYHYRWGQVNVGALSRALQERGMSEVSFHELDESLTGREGP 751
Query: 530 DG----FTVKVQDPEKSMIEVRAAVTVISAADKNLASRIVKAMENIL 572
G V+++ P ++ IE+ + I A + +L I A+ ++L
Sbjct: 752 VGEHKPLMVEIRSPSRAWIELGPNSSHIKANEPSLRHLIADAVNSVL 798
>gi|348690830|gb|EGZ30644.1| hypothetical protein PHYSODRAFT_263811 [Phytophthora sojae]
Length = 620
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 178/438 (40%), Gaps = 65/438 (14%)
Query: 14 GFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKI 73
GF +IY T+ G++ +EEL + E E EL +L++I
Sbjct: 84 GFKGQIYATQLTLDFGRVFLEELAALTQGDDSAVFVFEGVAVGM----ETELPMHSLKEI 139
Query: 74 ALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIIS 133
+ C KV+ + + E + + A SSG +GA W+I
Sbjct: 140 -------------------EQCCKKVRCVEYSEVVSLAYGVQVTALSSGHSLGASIWLIE 180
Query: 134 GAKGNIAYISGSNFASG----HAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDN 189
G +AY++ ASG H + D + + +L +DL D+ S+
Sbjct: 181 GPNDRLAYVAA---ASGDYNRHPKELDLMPLVDCETLLLTDLKP-------DRDPHSNTE 230
Query: 190 NNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIF 249
E +++ ++ E GG ++P + GV L+E A++
Sbjct: 231 RMVEHVLSGVTRVLER--------------------GGVCIVPTSPCGVVFDLVE--AVY 268
Query: 250 MEC--SSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIH 307
C + +P+Y IS A ++ T EWLC+++ EKL++G+ F H L+K H
Sbjct: 269 AACLHNKQNVPMYFISDHASRVMELTQLGAEWLCEKKIEKLYAGEDAFLHESLLKNGLFH 328
Query: 308 VFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAV 366
V S +Q I+F+ H SL+ G L+R + N++L+++ VDA A
Sbjct: 329 AVADV-SAATAATFQNGSIIFAGHPSLKFGRAPELIRMLGNESRNAVLLIDPAVDATEAF 387
Query: 367 LPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTSFSV-SHY 425
PF+ ++++ + C + P ++ P E+ S S + SH+
Sbjct: 388 APFQDLNIEKIACPIDPRLSCGDANQFIARCCPHNLIVPYEYTIAPSASAAEGAEMSSHF 447
Query: 426 SENETIH-IPSLKESAEL 442
S +H + + K EL
Sbjct: 448 SRVLPLHELTAAKTKTEL 465
>gi|301119461|ref|XP_002907458.1| integrator complex subunit, putative [Phytophthora infestans T30-4]
gi|262105970|gb|EEY64022.1| integrator complex subunit, putative [Phytophthora infestans T30-4]
Length = 614
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 167/380 (43%), Gaps = 59/380 (15%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
+L LP LT + GF +IY T+ G++ ++EL ++ E+S+ +E
Sbjct: 73 LLALPLLTEIFGFKGEIYATQLTLDFGRVFLKELAALSQ-------GEDSA---IFTFE- 121
Query: 63 LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSG 122
+ +D + ++ C K++ + + E + I A SSG
Sbjct: 122 -----------GVADDIPMFS-----VEEIEKCCRKIRCVEYSEVVSLAYGVQITALSSG 165
Query: 123 LDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQ 182
+GA W++ G +AY++ ASG DF+ R + DL+ D +L T D
Sbjct: 166 FSLGASIWLVEGPNDKLAYVAA---ASG---DFN-RHPKELDLLPLVDCETLLLT---DL 215
Query: 183 SSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQL 242
D + N E ++ + S ++ GG ++P + GV L
Sbjct: 216 KPDRDPHANTERMVER----------------VLSGVTRVLERGGVCIMPTSPCGVVFDL 259
Query: 243 LEQIAIFMECSSLK--IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKL 300
+E A++ C K +P+Y IS A ++ T EWLC+++ +KL++G+ F H L
Sbjct: 260 VE--AVYAACVHNKQNVPMYFISDHAARVMELTQLGAEWLCEKKIDKLYAGEDAFLHESL 317
Query: 301 IKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENE 359
+K H V S + +Q I+F H SL+ G L++ + N++L+++
Sbjct: 318 LKNNVFHAVTDV-SAATAVTFQNGSILFVSHPSLKFGRAPELIQMLGNESRNAVLLIDPS 376
Query: 360 VDAELAVLPFKPISMKVLQC 379
VD A PF+ + ++ + C
Sbjct: 377 VDDTEAFAPFQDLPIEKISC 396
>gi|325186610|emb|CCA21159.1| integrator complex subunit putative [Albugo laibachii Nc14]
Length = 650
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 109/457 (23%), Positives = 186/457 (40%), Gaps = 72/457 (15%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICM-------NMEYRQFYGAEESS 53
+L L LT GF IY+TE + G++M++E++ + + E Q E +
Sbjct: 39 FSILNLAVLTTHFGFQGDIYMTEMTFKTGRVMVDEILHLVDTGVDVSFEVSQ---PLEVA 95
Query: 54 GPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGI 113
G + + AL +I+ + V D KV+++ F E
Sbjct: 96 GGELCTLNPFQANTGALYRISRND--------------VDDAYRKVRSVGFCEVIRLPYG 141
Query: 114 LIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASG-HAMDFDYRAIQGSDLILYSDLS 172
L I A SSGL +G+C W IS A + YI ++ S HA D +I +D IL +DL
Sbjct: 142 LQITALSSGLSMGSCLWTISDANEKLTYIPAASADSNRHAKKIDIASIGKTDAILLTDLR 201
Query: 173 SLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIP 232
+++ + E L+N +S + G+ LI
Sbjct: 202 -------VNRDPLTTTEKMMETLLNHVSRI--------------------LDQRGTALIL 234
Query: 233 INRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGD 292
+ L+E I + I +SS AE+ + TN +WLC++R +KLF+G+
Sbjct: 235 TPPCTINFDLIETIYALLYRKQQSTSIVYLSSCAEQFMELTNAGADWLCEKRIDKLFAGE 294
Query: 293 PLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-- 350
F L K+K +H ++ + L +VF+ + SL G L + + DH
Sbjct: 295 DPFLISVLKKKKILHPLSSITTAA-LTELNNGGVVFATYASLHSGNGAILFKSLA-DHER 352
Query: 351 NSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRT 410
N+LL+++ D + + F M++++C LL P+ ++ PEE+
Sbjct: 353 NALLLIDPSEDHQAPL--FSNTKMEIIRCPIDPRLNCGDANQLLACCCPESLIVPEEYTL 410
Query: 411 HV--------------SFSDVTSFSVSHYSENETIHI 433
+ S SD +S +S +H+
Sbjct: 411 NTTAESDDMSNRNNEGSISDANDQEISRFSRVLPLHL 447
>gi|313212744|emb|CBY36674.1| unnamed protein product [Oikopleura dioica]
Length = 519
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 180/418 (43%), Gaps = 51/418 (12%)
Query: 91 HVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASG 150
V C S V+T+ +GE GI + A SSG IG+CNW+I IAYI
Sbjct: 143 QVDACFSYVKTINYGEPIDLFGIASVIAHSSGFCIGSCNWMIEIYDKKIAYICDHTSLKT 202
Query: 151 HAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEME 210
HA D +A++ SD+++ + L S FS D SV +
Sbjct: 203 HASRVDTKALKDSDILILNGLKSC--------PGFSP---------------DRSVNDA- 238
Query: 211 KLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFM-ECSSLKIPIYIISSVAEEL 269
C+ ++VK GGSV+ P+ GV L LLE ++ + IP Y IS +A+
Sbjct: 239 -----CATLDETVKWGGSVMFPVYPTGVMLDLLEIFIDYLAQMGRGHIPFYFISPIAKAA 293
Query: 270 LAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFS 329
LA+ PE L + +QEK F H I++ K+ ++ + L ++ P + F
Sbjct: 294 LAHAQIYPEALSEAKQEKASLPQFPFDHDLAIEKGKLKIYEDTNE-GLSAIFRGPAVFFG 352
Query: 330 PHWSLRLGPTIHLLRRWSGD-HNSLLVLE----NEVDAELAVLPFKPISMKVLQCSFLSG 384
H S+ LG L + W+ + N +V E N A + P+ ++ +G
Sbjct: 353 GHPSMELGLARKLGKDWANNPKNKFIVTECGFQNNTFAGRLNVKHAPVDTRMTT----TG 408
Query: 385 KKLQKVQPLLKILQPK-LVLFPEEWRTHVSFSDVTSFSVSHYSENETIHIPSLKESAELE 443
KL +++ L+PK LV+ TH + + + +T S K +++
Sbjct: 409 AKL-----MVQELKPKELVICQAILHTHPKLRE-SVIPPRIFHPGKTHDFSSFKTYRDVK 462
Query: 444 IAADIASKFQWRMLKQK-KLNITRLKGRLFVNHGKHQLLPENEPGGSSQTRPFLHWGS 500
+ ASK R + + + + G L +++G+ + + E G+S L WG+
Sbjct: 463 MDVSAASKVTLRPTPGRPDVCVGPISGTLNISNGQFRFTTDYE--GTSNIEQKL-WGA 517
>gi|313234387|emb|CBY24586.1| unnamed protein product [Oikopleura dioica]
Length = 579
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 184/428 (42%), Gaps = 51/428 (11%)
Query: 91 HVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASG 150
V C S V+T+ +GE GI + A SSG IG+CNW+I IAYI
Sbjct: 143 QVDACFSYVKTINYGEPIDLFGIASVIAHSSGFCIGSCNWMIEIYDKKIAYICDHTSLKT 202
Query: 151 HAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEME 210
HA D +A++ SD+++ + L S FS D SV +
Sbjct: 203 HASRVDTKALKDSDILILNGLKSC--------PGFSP---------------DRSVNDA- 238
Query: 211 KLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFM-ECSSLKIPIYIISSVAEEL 269
C+ ++VK GGSV+ P+ GV L LLE ++ + IP Y IS +A+
Sbjct: 239 -----CATLDETVKRGGSVMFPVYPTGVMLDLLEIFIDYLAQMGRGHIPFYFISPIAKAA 293
Query: 270 LAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFS 329
LA+ PE L + ++EK F H I++ K+ ++ + L ++ P + F
Sbjct: 294 LAHAQIYPEALSEAKKEKASLPQFPFDHDLAIEKGKLKIYEDTNE-GLSAIFRGPAVFFG 352
Query: 330 PHWSLRLGPTIHLLRRWSGD-HNSLLVLE----NEVDAELAVLPFKPISMKVLQCSFLSG 384
H S+ LG L + W+ + N +V E N A + P+ ++ +G
Sbjct: 353 GHPSMELGLARKLGKDWANNPKNKFIVTECGFQNNTFAGRLNVKHAPVDTRMTT----TG 408
Query: 385 KKLQKVQPLLKILQPK-LVLFPEEWRTHVSFSDVTSFSVSHYSENETIHIPSLKESAELE 443
KL +++ L+PK LV+ TH + + + +T S K +++
Sbjct: 409 AKL-----MVQELKPKELVICQAILHTHPKLRE-SVIPPRIFHPGKTHDFSSFKTYRDVK 462
Query: 444 IAADIASKFQWRMLKQK-KLNITRLKGRLFVNHGKHQLLPENEPGGSSQTRPFLHWGSPD 502
+ ASK + + + + + G L +++G+ + + E G+S L WG+
Sbjct: 463 MDVSAASKVTLQPTPGRPDVCVGPISGTLNISNGQFRFTTDYE--GTSNIEQKL-WGAMT 519
Query: 503 PENLLAEL 510
E L +L
Sbjct: 520 VEGLAKQL 527
>gi|403356179|gb|EJY77680.1| hypothetical protein OXYTRI_00685 [Oxytricha trifallax]
Length = 822
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 203/434 (46%), Gaps = 68/434 (15%)
Query: 3 MLGLPFLTRME---GFSAKIYITEAAARIGQLMMEELICMNMEYRQFY--GAEESS---G 54
+ GLPF+TR++ F K+++T +IGQ ++ EL+ +N + Q G +S G
Sbjct: 172 LYGLPFITRLQEQKKFKGKVFMTVPVGQIGQHLLNELVILNDQRNQTKQKGQGDSGSDFG 231
Query: 55 PQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISK-VQTLRFGEEACYNGI 113
+ K E+++ + + L G E A + +C + V L + E ++ +
Sbjct: 232 GSYFKQEKMKGIFAKL--------GIEEWQNLYTQADIDECFEQHVTLLNYNESYTFDNL 283
Query: 114 LIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASG--HAMDFDYRAIQGSDLILYSDL 171
+ I SSG+ IG+CNWI++ + I +S S+ + + F+ A+Q DL+L +
Sbjct: 284 IKITPLSSGMHIGSCNWILNVGQQKIGLLSNSSEEGDFRYPLYFNAEALQDLDLLLVGSV 343
Query: 172 SSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLI 231
++ +QS+F W++ S S Y EKL S + +S V++
Sbjct: 344 VK----QNAEQSNF------WQQ---SKSFY-------EKLNMCLSQSPNS-----KVIL 378
Query: 232 PINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSG 291
P+ + LE + + + + I IS A +L+ Y+N E+L ++ Q K+ S
Sbjct: 379 PVQSPFI----LEIVDLLIHKIT-HARIIFISESANQLIQYSNINVEYLNQKLQTKILSS 433
Query: 292 DPLFAHVKLIKEKKIHVFPAV-----HSPKLLMNW-------QEPCIVFSPHWSLRLGPT 339
+ F+ KL KE+++ VF + + + M QE I SP+ LR+G
Sbjct: 434 ENPFSFDKLFKEERLFVFKNIKEYLEYKKEKAMGMAVIDEFCQELIITTSPN--LRIGEA 491
Query: 340 I---HLLRRWSGDHNSLLVLENEV-DAELAVLPFKPI-SMKVLQCSFLSGKKLQKVQPLL 394
+ H L ++ N +++ + + + +L + PF + +++VL Q++ L+
Sbjct: 492 VYWLHHLNKYQPSQNFMILTDPQYCNNDLLMKPFAKVNNIRVLHSPIDLNLSFQQLNNLV 551
Query: 395 KILQPKLVLFPEEW 408
L+PK V+ P ++
Sbjct: 552 NRLKPKRVICPRDY 565
>gi|395507652|ref|XP_003758136.1| PREDICTED: integrator complex subunit 9 [Sarcophilus harrisii]
Length = 410
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 110/240 (45%), Gaps = 38/240 (15%)
Query: 64 ELLPSALRKIALGEDGSELGG--GCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS 121
LLP+ L+ D E+ C + V +SK+Q + + ++ G + + SS
Sbjct: 70 RLLPAPLK------DAVEVSTWRRCYTMQEVNSALSKIQLVGYSQKIELFGAVQVTPLSS 123
Query: 122 GLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDID 181
G +G+ NWII ++Y+SGS+ + H D +++ SD+++ + L+ + +
Sbjct: 124 GYALGSSNWIIQSHYEKVSYVSGSSLLTTHPQPMDQTSLKNSDVLILTGLTQIPT----- 178
Query: 182 QSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQ 241
+N D V E CS +V+ GG+VLIP GV
Sbjct: 179 ------------------ANPDGMVGEF------CSNLALTVRNGGNVLIPCYPSGVIYD 214
Query: 242 LLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKL 300
LLE + +++ + L +P Y IS VA L + EWLC +Q K++ +P F H +L
Sbjct: 215 LLECLYQYIDSAGLSNVPFYFISPVANSSLEFAQIFAEWLCHNKQTKVYLPEPPFPHAEL 274
>gi|449670628|ref|XP_004207309.1| PREDICTED: integrator complex subunit 9-like, partial [Hydra
magnipapillata]
Length = 272
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 125/281 (44%), Gaps = 44/281 (15%)
Query: 2 GMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWE 61
+L LP++T GF+ K++ TE G+L MEEL+ N + Q + W +
Sbjct: 32 NILALPYVTEYSGFNGKVFATEPTLHFGRLYMEELVSYNESFLQ-----KKKFTLWKNKD 86
Query: 62 ELELLPSALRKIALGEDGSELGGGCPCIAHVKDC---ISKVQTLRFGEEACYNGILIIKA 118
+ LPS L D G I + +D ISK+Q + F E G++ + A
Sbjct: 87 IQKFLPSPLCDF---HDAVTWEG----IYNARDVSSSISKIQCVGFSERIDVLGLIRVTA 139
Query: 119 FSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTE 178
SSG IG+ NWI+ I YIS S+ + H++ + A++ SDL + L+SL T
Sbjct: 140 VSSGYAIGSSNWILETDYHKICYISSSSTYATHSLPMEQNALKNSDLCI---LNSLTPTS 196
Query: 179 DIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGV 238
++ + D ++L N C +++ ++L GV
Sbjct: 197 IVNPDAMLRD------FCSNLGNI---------------CYLENQFKRSTILTK----GV 231
Query: 239 FLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPE 278
L E + FM+ S L IPIY IS VA+ LAY N E
Sbjct: 232 IFDLFEYLCAFMDGSGLSFIPIYFISPVADSSLAYANIYAE 272
>gi|449674758|ref|XP_004208251.1| PREDICTED: integrator complex subunit 9 homolog [Hydra
magnipapillata]
Length = 304
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 118/247 (47%), Gaps = 11/247 (4%)
Query: 280 LCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPT 339
L +Q K++ +P F H +L+K +I + +HS L + + P IVF+ H SLR G
Sbjct: 9 LNTNKQAKVYLPEPPFLHHELVKNGRIKHYENLHS-GLSSSLKTPSIVFTGHPSLRFGDV 67
Query: 340 IHLLRRWSGDH-NSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQ 398
+H L W + N+++ +++E A+ P++P+SMK + C + LL+ ++
Sbjct: 68 VHFLNLWGHESGNTVIFIDSEFPYLEALTPYQPLSMKAVFCPIDPRLNFHQSNKLLRDIK 127
Query: 399 PKLVLFPEEWRT-------HVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASK 451
P LV+ PE ++T + T V + + I IP K A++ ++ ++A
Sbjct: 128 PGLVVIPEAYQTPPALMPQRTDLTINTDIPVRAFQYMDVIDIPLHKTFAKVTLSPEVAKS 187
Query: 452 FQWRMLKQKKLNITRLKGRLFVNHGKHQLLPENEPGGSSQTRPFLHWGSPDPENLLAELS 511
+ + + L I ++ ++ +H L P + S+ L +GS D ++ L
Sbjct: 188 LCPKQI-EDGLAIASVRAKVVTRDNRHTLKPVDLDNEISKVGKQL-FGSIDVNQFISALK 245
Query: 512 KMGINGS 518
GIN +
Sbjct: 246 MQGINNA 252
>gi|256078142|ref|XP_002575356.1| hypothetical protein [Schistosoma mansoni]
gi|353232819|emb|CCD80175.1| hypothetical protein Smp_143920 [Schistosoma mansoni]
Length = 910
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 127/306 (41%), Gaps = 55/306 (17%)
Query: 3 MLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 62
+LGLPFL F K++ TE + G++++++L+C E Q + +E +S +K ++
Sbjct: 115 ILGLPFLFENTNFRGKVFATEPVVKFGKILIDDLLC---ELDQLFESEVNSDLSKVKVDK 171
Query: 63 LELLPSALRKIALGEDGSELG-GGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS 121
L I + E V + + + + E G+L IK S+
Sbjct: 172 LN------NPIGYLLNSDEFNWTKFYTRESVIKALDNIHLVAYHEPVDLFGLLTIKGLSA 225
Query: 122 GLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDID 181
G IG+CNWII+ S FD + +D+++ ++ S E
Sbjct: 226 GYGIGSCNWIIT---------------SSTEKPFDDSTFEDTDVLIIGTVNMYASDE--- 267
Query: 182 QSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQ 241
+++VEE C + ++ GG+VL+P N G+
Sbjct: 268 --------------------LEKTVEEF------CHIVVQTLAHGGNVLVPSNPSGIIFD 301
Query: 242 LLEQ-IAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKL 300
LLE I + + PI+ IS+ LAY+N EWL ++ L++ D F L
Sbjct: 302 LLETAIQAKDNFNVARSPIFFISNQVHVSLAYSNAYGEWLNSVKESVLYNADAPFIFQSL 361
Query: 301 IKEKKI 306
++ K+
Sbjct: 362 LQCGKL 367
>gi|170578951|ref|XP_001894613.1| hypothetical protein [Brugia malayi]
gi|158598704|gb|EDP36544.1| conserved hypothetical protein [Brugia malayi]
Length = 545
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 114/238 (47%), Gaps = 10/238 (4%)
Query: 255 LKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHS 314
+ +P+Y IS VAE LAY+N EWL +++Q + + F H + ++ V+ ++
Sbjct: 245 VDVPVYFISPVAESTLAYSNIYVEWLSEKKQSMVNIPEEPFKHGLTSRNGRLKVYDNIYG 304
Query: 315 PKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFKPIS 373
+ PC++F+ H SLR+G +H L W D N+L++ + + + P++ +S
Sbjct: 305 -DFCRQMRTPCVIFTGHPSLRIGNAVHFLEMWGNDSKNALIMTDPDYPIQNVYGPYEKLS 363
Query: 374 MKVLQCSFLSGKKLQKVQP-LLKILQPKLVLFPEEW-RTHVSFSDVTSFSVSH-----YS 426
++ + ++ P +L L PKL++ PE + + + S T F V++ +
Sbjct: 364 IRAFFFPIETRLDFSQLNPSILPDLAPKLLVMPEVYTQPPPNSSQRTDFVVAYNARATFR 423
Query: 427 ENETIHIPSLKESAELEIAADIASKFQWR-MLKQKKLNITRLKGRLFVNHGKHQLLPE 483
+T IPS ++ + + D + R + ++ LKG L V +L P+
Sbjct: 424 YGDTFTIPSTAKTKRVRLHPDTLRCIELRGHYDHGDIGLSSLKGILSVYDNILELNPD 481
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 31/181 (17%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
M +L LPF T F+ +Y T+ ++G+L+MEEL +++ EE Q W
Sbjct: 70 MSLLALPFFTEETKFTGVVYATDPTLQLGRLVMEEL----LDFFDRVDREE----QDYSW 121
Query: 61 EELELL----------PSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACY 110
++ L P R E +++C++KVQ + F E
Sbjct: 122 KKPALFMSFPNVPTSDPREWRPFYSRE-------------QMENCLAKVQRVSFRESINI 168
Query: 111 NGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSD 170
+G + A+SSG IG+CNWI+ I Y+S ++ + H + ++G D ++ +
Sbjct: 169 HGAATVAAYSSGYSIGSCNWIVRTEHEKIGYLSATSSRNSHTKPVQWDQLRGCDALILTS 228
Query: 171 L 171
+
Sbjct: 229 I 229
>gi|328864962|gb|EGG13348.1| integrator complex subunit 9 [Dictyostelium fasciculatum]
Length = 622
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 112/246 (45%), Gaps = 26/246 (10%)
Query: 2 GMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWE 61
++ LP++T F+ KIY TE +IG+L++ EL+ +M Q +S+ Q+ W+
Sbjct: 118 NLISLPYITEHTSFNGKIYATEPTIQIGRLLLLELVQYDMNSNQ-----KSNINQY--WQ 170
Query: 62 ELELLPSALRKIALGEDGSELGGGCPCIAHVKD---CISKVQTLRFGEEACYNGILIIKA 118
ELL L + G + D C K+Q +R+ E I+A
Sbjct: 171 STELL--KLIGAEQANSAFKHAKGWKTLYSRFDTEKCFEKIQAVRYNEFINLYS-FTIRA 227
Query: 119 FSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTE 178
SSG +G+CNW+I I Y+S S+ + D ++IQ D+ +Y+ S ++
Sbjct: 228 TSSGYCLGSCNWVIESMNEKIVYLSDSSVYERYPEPIDLQSIQSPDVFIYA--SKINHPL 285
Query: 179 DIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGV 238
S+ ++ S + Y E++ E+ C +++ GGSVLIP+ G
Sbjct: 286 QQPPSTIGQ-----QQQQQSFNPYMENINEL------FHCIGNTISNGGSVLIPVYSCGT 334
Query: 239 FLQLLE 244
L L E
Sbjct: 335 VLDLFE 340
>gi|402581441|gb|EJW75389.1| hypothetical protein WUBG_13700, partial [Wuchereria bancrofti]
Length = 249
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 31/189 (16%)
Query: 111 NGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSD 170
+G + A+SSG IG+CNWI+ I Y+S ++ + H + ++G D ++
Sbjct: 74 HGAATVAAYSSGYSIGSCNWIVRTEHEKIGYLSATSSRNSHTKPVQWDQLRGCDALI--- 130
Query: 171 LSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVL 230
+ S+ + E E A D++K GSVL
Sbjct: 131 -------------------------LTSICRFPEHSPETSVCHAFAVIA-DTLKRNGSVL 164
Query: 231 IPINRVGVFLQLLEQIAIFMECSSL--KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKL 288
+PI G+ LLE I++ ++ + +P+Y IS VAE LAY+N EWL +++Q +
Sbjct: 165 MPICPTGILYDLLEVISMQLDQHDVPVDVPVYFISPVAESTLAYSNIYAEWLSEKKQNMV 224
Query: 289 FSGDPLFAH 297
+ F H
Sbjct: 225 NIPEEPFKH 233
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 231 IPINRVGVFLQLLEQIAIFMECSSL--KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKL 288
+PI G+ LLE I++ ++ + +P+Y IS VAE LAY+N EWL +++Q +
Sbjct: 1 MPICPTGILYDLLEVISMQLDQHDVPVDVPVYFISPVAESTLAYSNIYAEWLSEKKQNMV 60
Query: 289 FSGDPLFAH 297
+ F H
Sbjct: 61 NIPEEPFKH 69
>gi|167533421|ref|XP_001748390.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773202|gb|EDQ86845.1| predicted protein [Monosiga brevicollis MX1]
Length = 577
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 140/317 (44%), Gaps = 36/317 (11%)
Query: 92 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAK---GNIAYISGSNFA 148
V++C ++ ++ + E + + A S+G +G+ WI+S G + +I+ ++
Sbjct: 134 VQNCFDRITSVSYREHVKLHEGVQAWAVSAGYALGSAVWILSDGVEQVGLLRHIAPND-- 191
Query: 149 SGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEE 208
H F +A+ ++ S L D D +Q+
Sbjct: 192 RRHPKPFAQQALASCGTLVCSHLKMAD--HDPNQA------------------------- 224
Query: 209 MEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEE 268
+++LA ++V GG V+IP++ GVFL L+E + ++ + + ++ A+
Sbjct: 225 VQRLAMTVG---EAVSQGGHVVIPVDLNGVFLDLMELLMTHLQNCGVVANMVVVGRYAKA 281
Query: 269 LLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVF 328
+LAY + WL K ++ +++ P F + + I+ I +F +V P+ P + F
Sbjct: 282 VLAYADIYSAWLAKSKRSRVYEPKPPFPYNEFIQSGHIKLFSSVLDPEFSRLPTGPAVFF 341
Query: 329 SPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKL 387
SLR G + + G+ H++++ + VD V F + +V+Q +G
Sbjct: 342 VEDPSLRYGDGLAAVEMIMGNPHSAIIGISPTVDIVERVGVFSNVRARVIQLPIDAGLHP 401
Query: 388 QKVQPLLKILQPKLVLF 404
+ + LL+ +Q + V+
Sbjct: 402 KDLNNLLRHMQARKVIL 418
>gi|384498336|gb|EIE88827.1| hypothetical protein RO3G_13538 [Rhizopus delemar RA 99-880]
Length = 434
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 113/272 (41%), Gaps = 38/272 (13%)
Query: 92 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASG- 150
++ C+ K+Q +R+ E L + A SSG IG+ NW++ + I ++S S+
Sbjct: 45 IQGCLEKIQPVRYNESLFLFSTLSLVAHSSGYSIGSANWLLETSFKKIVFLSTSSLTPNL 104
Query: 151 HAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEME 210
H FD + +D ++ SD+ S D SF E
Sbjct: 105 HPAPFDQSLLTEADAVIVSDVVEPSS----DHVSF----------------------ERS 138
Query: 211 KLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK--------IPIYII 262
+ + A ++++ +VLI + + LL I + + + +PIY+
Sbjct: 139 RTKLLAHIA-RTIQSNNNVLIAAPSMHIVFDLLGDIESYFKSIGAREIGGENDQVPIYVA 197
Query: 263 SSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKL-LMNW 321
+ VA + L Y+N EW+ RQ L+ AH +L+ + + V S +L
Sbjct: 198 NPVANKSLQYSNICGEWMNPDRQCLLYEPTTPLAHGQLMAKGALQTIETVDSVELGARGI 257
Query: 322 QEPCIVFS-PHWSLRLGPTIHLLRRWSGDHNS 352
+EPCIVF+ ++ GP L W +S
Sbjct: 258 REPCIVFAGDSVFMQKGPIAWFLEHWKQSEHS 289
>gi|328872790|gb|EGG21157.1| hypothetical protein DFA_01032 [Dictyostelium fasciculatum]
Length = 610
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 103/245 (42%), Gaps = 39/245 (15%)
Query: 2 GMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWE 61
++ LP++T F+ KIY TE +IG+ + + + E + GAE+++ + +
Sbjct: 124 NLISLPYITEHTSFNGKIYATEPTIQIGRSNINQY-WQSTELLKLIGAEQANSA-FKHAK 181
Query: 62 ELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS 121
+ L S + C K+Q +R+ E I+A SS
Sbjct: 182 SWKTLYSRFD--------------------TEKCFEKIQAVRYNEFINLYS-FTIRATSS 220
Query: 122 GLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSS--LDSTED 179
G +G+CNW+I I Y+S S+ + D ++IQ D+ +Y+ + L
Sbjct: 221 GYCLGSCNWVIESMNEKIVYLSDSSVYERYPEPIDLQSIQSPDVFIYASKMNHPLQQPPS 280
Query: 180 IDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVF 239
I N + S + Y E++ E+ C +++ GGSVLIP+ G
Sbjct: 281 I--------NGQQQHQQQSFNPYMENINEL------FHCIGNTISNGGSVLIPVYSCGTV 326
Query: 240 LQLLE 244
L L E
Sbjct: 327 LDLFE 331
>gi|118370162|ref|XP_001018283.1| hypothetical protein TTHERM_01159920 [Tetrahymena thermophila]
gi|89300050|gb|EAR98038.1| hypothetical protein TTHERM_01159920 [Tetrahymena thermophila
SB210]
Length = 747
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 149/358 (41%), Gaps = 35/358 (9%)
Query: 6 LPFLTRMEGFSAKIYITEAAARIGQLMMEE---LICMNMEYRQFYGAEESSGPQWMKWEE 62
LPFL + AK+Y T A+IGQ +++E L+ +E +G + +
Sbjct: 140 LPFLFQQNKLKAKVYATVPVAQIGQHVLQEYYKLVQNRNRNIDLSSSENKNGQYFQNSQN 199
Query: 63 LELLPSALRKIALGEDGSELGGGCPCIAH--VKDCISKVQTLRFGEEACYNGI-LIIKAF 119
S + + E+ ++ +++ +SK+ T+ FG++ G+ II+
Sbjct: 200 SYFQESEFLDLFETQYDLEINQWADIFSYEDIQNALSKITTMNFGQKLQLEGVDTIIEPV 259
Query: 120 SSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTED 179
SSG IG+C WI+ +A + A H + Q S L DS +
Sbjct: 260 SSGYSIGSCVWILEYHSNRLAVFNN---ACKHNIRHTLNLDQSSKL--------KDSLDF 308
Query: 180 IDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVF 239
+ + F N +EL ++ S L A ++ +++IPI G+
Sbjct: 309 LFVTPFL---NTSKELTALTKQFNTSYLSEAYLIKFFQLAQQLLQQKQNLIIPIRDGGII 365
Query: 240 LQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLF---SGDPLFA 296
L LL+ + + +S YII A + + N+ E+L + Q+K+F +P A
Sbjct: 366 LDLLDILE--KKLASFIRHFYIICESALPYIHFGNSNVEFLNEILQKKIFCENPENPFSA 423
Query: 297 HVKLI-KEKKIHVFPAVHSPKLLMNWQ---------EPCIVFSPHWSLRLGPTIHLLR 344
+ + + K + I + P + + L Q P I F SLRLG T+ LL+
Sbjct: 424 YDQFVQKNQNISILPDFIAFQQLSKSQPLQSLIINRTPSIFFVVDSSLRLGNTMQLLK 481
>gi|256084683|ref|XP_002578556.1| cleavage and polyadenylation specificity factor [Schistosoma
mansoni]
gi|350644758|emb|CCD60512.1| cleavage and polyadenylation specificity factor,putative
[Schistosoma mansoni]
Length = 619
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/353 (20%), Positives = 139/353 (39%), Gaps = 79/353 (22%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP++T + G+ IY+T I +++E+ +N+E R +++ M +
Sbjct: 76 ALPYMTEVIGYDGPIYMTHPTKAICPILLEDYRKINVERR----GDQNFFTSDMIYR--- 128
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
C+ V+ C+ QT++ +E L I+AF +G
Sbjct: 129 -----------------------CMTKVR-CVYIHQTVKVDDE------LEIQAFYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA +++ ++ Y N + + + DL++ TE ++
Sbjct: 159 LGAAMFLVRVGTNSVLYTGDYNMTPDRHLGAAWVSRCRPDLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E E +EK+ V+AGG VLIP+ +G +L
Sbjct: 210 IRDSKRTRER------------EFLEKIH-------ARVEAGGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKE 303
+ + E ++ +PIY +AE+ Y W ++ +E + F H+K + +
Sbjct: 251 LLETYWERMNISVPIYFSMGMAEKANEYYKLFISWTNQKIKETFVKRNMFDFKHIKPLGQ 310
Query: 304 KKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
V +P P +VF+ L G ++H+ R+W+ D +++V+
Sbjct: 311 G------TVDNPG-------PMVVFATPGMLHAGQSLHIFRKWASDERNMVVI 350
>gi|74220481|dbj|BAE31460.1| unnamed protein product [Mus musculus]
Length = 600
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/353 (19%), Positives = 128/353 (36%), Gaps = 79/353 (22%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKE 303
+ F E +LK+PIY + + E+ Y W ++ ++ G+ F H+K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFITWTNQKIRKTFVQGNMFEFKHIKAFD- 309
Query: 304 KKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
+ + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 310 ------------RTFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|242013971|ref|XP_002427672.1| Endoribonuclease YSH1, putative [Pediculus humanus corporis]
gi|212512102|gb|EEB14934.1| Endoribonuclease YSH1, putative [Pediculus humanus corporis]
Length = 572
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 82/416 (19%), Positives = 151/416 (36%), Gaps = 95/416 (22%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+LT M G++ IY+T I +++E++ +++E K E+
Sbjct: 53 ALPYLTEMVGYNGPIYMTHPTKAISPILLEDMRKISVE----------------KKGEVN 96
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
S + +KDC+ KV T+ + + L IKA+ +G
Sbjct: 97 FFTSQM---------------------IKDCMKKVITVTLHQSIMVDSQLEIKAYYAGHV 135
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + DL++ TE ++
Sbjct: 136 LGAAMFWIRVGNLSVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------TESTYATT 186
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D + E + L + C ++ GG VLIP+ +G +L
Sbjct: 187 IRDS---------------KRCRERDFLKKVHEC----IEKGGKVLIPVFALGRAQELCI 227
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL--FAHVKLIK 302
+ + E +LK+PIY + E+ Y W Q+ K F + F H+K
Sbjct: 228 LLETYWERMNLKVPIYFAVGLTEKANNYYKMFITW-TNQKIRKTFVQRNMFDFKHIKPFD 286
Query: 303 EKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLL-------- 354
I W P +VF+ L G ++ + ++W+ + N+++
Sbjct: 287 RSYID-----------QAW--PMVVFATPGMLHAGLSLQIFKKWAPNENNMVIMPGFCVA 333
Query: 355 ------VLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLF 404
+L + E + M V SF + + + L++ +PK VL
Sbjct: 334 GTVGHKILSGQKKIEFENRQIVDVKMSVQYMSFSAHADAKGIMQLIQYCEPKNVLL 389
>gi|402589534|gb|EJW83466.1| hypothetical protein WUBG_05625, partial [Wuchereria bancrofti]
Length = 231
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 15/134 (11%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
M +L LPF T F+ +Y T+ ++G+L+MEEL +++ EE W K
Sbjct: 105 MSLLALPFFTEKTNFTGVVYATDPTLQLGRLVMEEL----LDFFDRVDREEQDS-SWKKP 159
Query: 61 EELELLPSALRKIALGEDGSELGGGCPCIA--HVKDCISKVQTLRFGEEACYNGILIIKA 118
P+ S+ P + +++C++KVQ + F E +G + A
Sbjct: 160 ALFMSFPNV--------PTSDPREWKPFYSREQMENCLAKVQRVSFRESINIHGAATVAA 211
Query: 119 FSSGLDIGACNWII 132
+SSG IG+CNWI+
Sbjct: 212 YSSGYSIGSCNWIV 225
>gi|12053137|emb|CAB66747.1| hypothetical protein [Homo sapiens]
gi|49065540|emb|CAG38588.1| FLJ20542 [Homo sapiens]
gi|117645260|emb|CAL38096.1| hypothetical protein [synthetic construct]
gi|208966056|dbj|BAG73042.1| cleavage and polyadenylation specific factor 3-like [synthetic
construct]
Length = 600
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 128/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T + I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHSTQAICPILLEDY---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|321457255|gb|EFX68345.1| hypothetical protein DAPPUDRAFT_218302 [Daphnia pulex]
Length = 597
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/355 (20%), Positives = 131/355 (36%), Gaps = 83/355 (23%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LPF+T M G++ IY+T I +++E++
Sbjct: 75 ALPFMTEMVGYNGPIYMTHPTKAIAPILLEDM---------------------------- 106
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RK+A+ G AH+KDC+ KV + + + + IKA+ +G
Sbjct: 107 ------RKVAVERKGET---NFFTSAHIKDCMKKVIAVTLHQTVQVDSEIEIKAYYAGHV 157
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + + ++ Y N + + ID+
Sbjct: 158 LGAAMFHVKVGNQSVVYTGDYNMTPDRHLGAAW----------------------IDKCR 195
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLA---FICSCAIDSVKAGGSVLIPINRVGVFLQ 241
++ S S Y ++ + ++ F+ D V GG VLIP+ +G +
Sbjct: 196 --------PNILISESTYATTIRDSKRCRERDFLKKVH-DCVDRGGKVLIPVFALGRAQE 246
Query: 242 LLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLI 301
L + + E +LK PIY + E+ Y W Q+ K F +F
Sbjct: 247 LCILLETYWERMNLKAPIYFAVGLTEKANNYYKMFITW-TNQKIRKTFVQRNMFEF---- 301
Query: 302 KEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
K I F ++ + P +VF+ L G ++ L ++W+ + N++L++
Sbjct: 302 --KHIRPFDKSYA-----DTPGPMVVFATPGMLHAGLSLQLFKKWAPNENNMLIM 349
>gi|321468347|gb|EFX79332.1| hypothetical protein DAPPUDRAFT_304859 [Daphnia pulex]
Length = 597
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/355 (20%), Positives = 131/355 (36%), Gaps = 83/355 (23%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LPF+T M G++ IY+T I +++E++
Sbjct: 75 ALPFMTEMVGYNGPIYMTHPTKAIAPILLEDM---------------------------- 106
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RK+A+ G AH+KDC+ KV + + + + IKA+ +G
Sbjct: 107 ------RKVAVERKGET---NFFTSAHIKDCMKKVIAVTLHQTVQVDSEIEIKAYYAGHV 157
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + + ++ Y N + + ID+
Sbjct: 158 LGAAMFHVKVGNQSVVYTGDYNMTPDRHLGAAW----------------------IDKCR 195
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLA---FICSCAIDSVKAGGSVLIPINRVGVFLQ 241
++ S S Y ++ + ++ F+ D V GG VLIP+ +G +
Sbjct: 196 --------PNILISESTYATTIRDSKRCRERDFLKKVH-DCVDRGGKVLIPVFALGRAQE 246
Query: 242 LLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLI 301
L + + E +LK PIY + E+ Y W Q+ K F +F
Sbjct: 247 LCILLETYWERMNLKAPIYFAVGLTEKANNYYKMFITW-TNQKIRKTFVQRNMFEF---- 301
Query: 302 KEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
K I F ++ + P +VF+ L G ++ L ++W+ + N++L++
Sbjct: 302 --KHIRPFDKSYA-----DTPGPMVVFATPGMLHAGLSLQLFKKWAPNENNMLIM 349
>gi|297279172|ref|XP_001092173.2| PREDICTED: integrator complex subunit 11 isoform 3 [Macaca mulatta]
Length = 579
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 55 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 86
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 87 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 137
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 138 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 188
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 189 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 229
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 230 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 282
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 283 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 329
>gi|395840791|ref|XP_003793235.1| PREDICTED: integrator complex subunit 11 isoform 1 [Otolemur
garnettii]
Length = 600
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|324504608|gb|ADY41989.1| Integrator complex subunit 11 [Ascaris suum]
Length = 588
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/421 (19%), Positives = 154/421 (36%), Gaps = 105/421 (24%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP++T M G+ IY+T I +++E+ + EYR E
Sbjct: 76 ALPYMTEMVGYEGPIYMTYPTKAIAPVLLEDFRKVQTEYRG----------------ETN 119
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
S + +K C+ KV + EE + L I+AF +G
Sbjct: 120 FFTSQM---------------------IKTCMRKVTPVNVNEEVNVDDKLSIQAFYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA ++I GS+ ++Y+ ++T D +
Sbjct: 159 LGAAMFLIK---------------------------VGSESVIYT--GDFNTTADRHLGA 189
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLA---FICSCAIDSVKAGGSVLIPINRVGVFLQ 241
+ +L+ S + Y ++ + ++ F+ D V GG VLIP+ +G +
Sbjct: 190 AHVEPGLKPDLLISETTYATTIRDSKRARERDFLKKVH-DCVANGGKVLIPVFALGRAQE 248
Query: 242 LLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLI 301
L + + E L +PI+ +AE+ Y W ++ + F H +
Sbjct: 249 LCILLESYWERMDLTVPIFFSHGLAEKATQYYRLFISWTNEKIKRT-------FVHRNMF 301
Query: 302 KEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLEN--- 358
K I F S + P ++FS L G ++ + ++W D +++++
Sbjct: 302 DFKHIRPFDQSFS-----DSPGPMVLFSTPGMLHGGQSLRVFKKWCSDEKNMVIMPGFCV 356
Query: 359 ---------------EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVL 403
E+D ++ I++ V SF + + + L++ +PK V+
Sbjct: 357 AGTIGAKVIGGAKKVEIDGKML-----DINLGVEYMSFSAHADAKGIMQLIRQCEPKNVM 411
Query: 404 F 404
F
Sbjct: 412 F 412
>gi|374253821|ref|NP_001243389.1| integrator complex subunit 11 isoform 3 [Homo sapiens]
gi|194386866|dbj|BAG59799.1| unnamed protein product [Homo sapiens]
Length = 571
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 47 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 78
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 79 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 129
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 130 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 180
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 181 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 221
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 222 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 274
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 275 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 321
>gi|74198351|dbj|BAE39661.1| unnamed protein product [Mus musculus]
Length = 600
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRTFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|149024842|gb|EDL81339.1| similar to RIKEN cDNA 2410006F12 [Rattus norvegicus]
Length = 601
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 77 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 108
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 109 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 159
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 160 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 210
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 211 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 251
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 252 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 304
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 305 HIKAF-----DRTFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 351
>gi|426327394|ref|XP_004024503.1| PREDICTED: integrator complex subunit 11 isoform 3 [Gorilla gorilla
gorilla]
Length = 571
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 47 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 78
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 79 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 129
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 130 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 180
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 181 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 221
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 222 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 274
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 275 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 321
>gi|354495797|ref|XP_003510015.1| PREDICTED: integrator complex subunit 11-like [Cricetulus griseus]
gi|344251677|gb|EGW07781.1| Integrator complex subunit 11 [Cricetulus griseus]
Length = 600
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRTFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|21312614|ref|NP_082296.1| integrator complex subunit 11 [Mus musculus]
gi|81904239|sp|Q9CWS4.1|INT11_MOUSE RecName: Full=Integrator complex subunit 11; Short=Int11; AltName:
Full=Cleavage and polyadenylation-specific factor 3-like
protein; Short=CPSF3-like protein
gi|12845859|dbj|BAB26928.1| unnamed protein product [Mus musculus]
gi|26355309|dbj|BAC41135.1| unnamed protein product [Mus musculus]
gi|74192536|dbj|BAE43054.1| unnamed protein product [Mus musculus]
gi|74219576|dbj|BAE29558.1| unnamed protein product [Mus musculus]
gi|148683102|gb|EDL15049.1| cleavage and polyadenylation specific factor 3-like, isoform CRA_b
[Mus musculus]
Length = 600
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRTFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|76559911|ref|NP_001029064.1| integrator complex subunit 11 [Rattus norvegicus]
gi|119371245|sp|Q3MHC2.1|INT11_RAT RecName: Full=Integrator complex subunit 11; Short=Int11; AltName:
Full=Cleavage and polyadenylation-specific factor 3-like
protein; Short=CPSF3-like protein
gi|75867808|gb|AAI05304.1| Cleavage and polyadenylation specific factor 3-like [Rattus
norvegicus]
Length = 600
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRTFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|444519369|gb|ELV12789.1| Integrator complex subunit 11 [Tupaia chinensis]
Length = 601
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 77 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 108
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 109 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 159
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 160 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 210
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 211 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 251
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 252 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 304
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 305 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 351
>gi|197099184|ref|NP_001124760.1| integrator complex subunit 11 [Pongo abelii]
gi|55725797|emb|CAH89679.1| hypothetical protein [Pongo abelii]
Length = 655
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFTDNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|296206477|ref|XP_002750225.1| PREDICTED: integrator complex subunit 11 isoform 1 [Callithrix
jacchus]
Length = 600
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|33300633|ref|NP_060341.2| integrator complex subunit 11 isoform 2 [Homo sapiens]
gi|118572557|sp|Q5TA45.2|INT11_HUMAN RecName: Full=Integrator complex subunit 11; Short=Int11; AltName:
Full=Cleavage and polyadenylation-specific factor 3-like
protein; Short=CPSF3-like protein; AltName: Full=Protein
related to CPSF subunits of 68 kDa; Short=RC-68
gi|14124912|gb|AAH07978.1| Cleavage and polyadenylation specific factor 3-like [Homo sapiens]
gi|60650138|tpg|DAA05669.1| TPA_exp: beta-lactamase fold protein family member RC-68 [Homo
sapiens]
gi|78100161|tpg|DAA05728.1| TPA_exp: integrator complex subunit 11 [Homo sapiens]
gi|119576636|gb|EAW56232.1| cleavage and polyadenylation specific factor 3-like, isoform CRA_a
[Homo sapiens]
gi|119576638|gb|EAW56234.1| cleavage and polyadenylation specific factor 3-like, isoform CRA_a
[Homo sapiens]
Length = 600
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|402852593|ref|XP_003891002.1| PREDICTED: integrator complex subunit 11 isoform 1 [Papio anubis]
gi|355557446|gb|EHH14226.1| hypothetical protein EGK_00111 [Macaca mulatta]
gi|387540112|gb|AFJ70683.1| integrator complex subunit 11 [Macaca mulatta]
Length = 600
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|348551496|ref|XP_003461566.1| PREDICTED: integrator complex subunit 11 [Cavia porcellus]
Length = 600
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|380798915|gb|AFE71333.1| integrator complex subunit 11 isoform 2, partial [Macaca mulatta]
Length = 588
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 64 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 95
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 96 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 146
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 147 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 197
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 198 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 238
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 239 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 291
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 292 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 338
>gi|118572558|sp|Q5NVE6.2|INT11_PONAB RecName: Full=Integrator complex subunit 11; Short=Int11; AltName:
Full=Cleavage and polyadenylation-specific factor 3-like
protein; Short=CPSF3-like protein
Length = 600
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|343958192|dbj|BAK62951.1| protein related to CPSF subunits 68 kDa [Pan troglodytes]
Length = 600
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|397476276|ref|XP_003809533.1| PREDICTED: integrator complex subunit 11 isoform 1 [Pan paniscus]
gi|410206788|gb|JAA00613.1| cleavage and polyadenylation specific factor 3-like [Pan
troglodytes]
gi|410251172|gb|JAA13553.1| cleavage and polyadenylation specific factor 3-like [Pan
troglodytes]
gi|410297680|gb|JAA27440.1| cleavage and polyadenylation specific factor 3-like [Pan
troglodytes]
gi|410349815|gb|JAA41511.1| cleavage and polyadenylation specific factor 3-like [Pan
troglodytes]
Length = 600
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|403297738|ref|XP_003939709.1| PREDICTED: integrator complex subunit 11 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 600
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVEH-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|426327390|ref|XP_004024501.1| PREDICTED: integrator complex subunit 11 isoform 1 [Gorilla gorilla
gorilla]
Length = 600
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|441671688|ref|XP_004093259.1| PREDICTED: LOW QUALITY PROTEIN: integrator complex subunit 11
[Nomascus leucogenys]
Length = 585
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/351 (20%), Positives = 127/351 (36%), Gaps = 77/351 (21%)
Query: 6 LPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELEL 65
LP+ + M G+ IY+T I +++E+
Sbjct: 77 LPYFSEMVGYDGPIYMTHPTQAICPILLEDY----------------------------- 107
Query: 66 LPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDI 125
RKIA+ + G +KDC+ KV + + + L IKA+ +G +
Sbjct: 108 -----RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVL 159
Query: 126 GACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSF 185
GA + I ++ Y N + + +L++ TE ++
Sbjct: 160 GAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATTI 210
Query: 186 SDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQ 245
D E + L E+VE GG VLIP+ +G +L
Sbjct: 211 RDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVXALGRAQELCIL 251
Query: 246 IAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKK 305
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 252 LETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------KH 304
Query: 306 IHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 305 IKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|351697497|gb|EHB00416.1| Integrator complex subunit 11 [Heterocephalus glaber]
Length = 672
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 149 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 180
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 181 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 231
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 232 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 282
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 283 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 323
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 324 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 376
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 377 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 423
>gi|343958314|dbj|BAK63012.1| protein related to CPSF subunits 68 kDa [Pan troglodytes]
Length = 600
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVHDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|358333178|dbj|GAA51732.1| integrator complex subunit 11 [Clonorchis sinensis]
Length = 649
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/413 (19%), Positives = 160/413 (38%), Gaps = 92/413 (22%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP++T + G+ IY+T I +++++ + +E R E++ M +
Sbjct: 145 ALPYMTEIVGYDGPIYMTHPTKAICPILLDDYRKITVERR----GEQNFFTSEMIYR--- 197
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
C++ VK C+ QT++ +E L ++AF +G
Sbjct: 198 -----------------------CMSKVK-CVYVHQTVKVDDE------LELQAFYAGHV 227
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA ++I ++ Y N + + + D+++ TE ++
Sbjct: 228 LGAAMFLIRVGSQSVLYTGDYNMTPDRHLGAAWVSRCCPDILI---------TESTYATT 278
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E E +EK+ V+AGG VLIP+ +G +L
Sbjct: 279 IRDSKRARER------------EFLEKIH-------ARVEAGGKVLIPVFALGRAQELCI 319
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKE 303
+ + E ++ +PIY +AE+ Y W ++ +E + F H+K + +
Sbjct: 320 LLETYWERMNISVPIYFSMGMAEKANEYYKLFISWTNQKIKETFVKRNMFEFKHIKPLGQ 379
Query: 304 KKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDA- 362
+++ P +VF+ L G ++H+ R+W+ D +++V+ A
Sbjct: 380 G-------------IVDNPGPMVVFATPGMLHAGQSLHIFRKWAPDERNMVVIPGYCVAG 426
Query: 363 --------ELAVLPFK----PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVL 403
+ L F ++M+V SF + + + L+ QP+ VL
Sbjct: 427 TVGYKILNGVKRLEFDRQALDVNMRVEYLSFSAHADARGIMQLISHCQPRNVL 479
>gi|193786492|dbj|BAG51775.1| unnamed protein product [Homo sapiens]
Length = 606
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 82 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 113
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 114 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 164
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 165 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 215
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 216 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 256
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 257 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 309
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 310 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 356
>gi|397476278|ref|XP_003809534.1| PREDICTED: integrator complex subunit 11 isoform 2 [Pan paniscus]
Length = 606
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 82 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 113
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 114 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 164
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 165 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 215
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 216 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 256
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 257 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 309
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 310 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 356
>gi|432090010|gb|ELK23618.1| Integrator complex subunit 11 [Myotis davidii]
Length = 561
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 128/351 (36%), Gaps = 77/351 (21%)
Query: 6 LPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELEL 65
LP+ + M G+ IY+T I +++E+
Sbjct: 111 LPYFSEMVGYDGPIYMTHPTQAICPILLEDY----------------------------- 141
Query: 66 LPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDI 125
RKIA+ + G +KDC+ KV +R + + L IKA+ +G +
Sbjct: 142 -----RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVRLHQTVQVDEELQIKAYYAGHVL 193
Query: 126 GACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSF 185
GA + I ++ Y N + + +L++ TE ++
Sbjct: 194 GAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATTI 244
Query: 186 SDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQ 245
D E + L E+VE GG VLIP+ +G +L
Sbjct: 245 RDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCIL 285
Query: 246 IAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKK 305
+ F E +LK PIY + + E+ Y W Q+ K F +F + K
Sbjct: 286 LETFWERMNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMF------EFKH 338
Query: 306 IHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 339 IKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 384
>gi|158256210|dbj|BAF84076.1| unnamed protein product [Homo sapiens]
Length = 606
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 82 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 113
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 114 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 164
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 165 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 215
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 216 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 256
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 257 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 309
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 310 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 356
>gi|374253819|ref|NP_001243385.1| integrator complex subunit 11 isoform 1 [Homo sapiens]
gi|119576642|gb|EAW56238.1| cleavage and polyadenylation specific factor 3-like, isoform CRA_f
[Homo sapiens]
Length = 606
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 82 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 113
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 114 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 164
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 165 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 215
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 216 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 256
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 257 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 309
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 310 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 356
>gi|221055181|ref|XP_002258729.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193808799|emb|CAQ39501.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 764
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 129/289 (44%), Gaps = 46/289 (15%)
Query: 113 ILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNF-ASGHAMDFDYRAIQGSDLILYSDL 171
I+ I +SSG +G+CN++I+ N+ I+ S + + D ++ +D +L++
Sbjct: 201 IVCITPYSSGHSVGSCNFLINTNLLNLCIINKSCYNVKRYPSPLDLACLEKADFVLFTAY 260
Query: 172 SSLDSTEDI---------------DQSSFSDDNNNWEELMNSL--SNYDESVEEMEKLAF 214
S ++ + + S S + +E +N NY +S+ +
Sbjct: 261 SRGNTGAEEPSERRNAPTEGDPKGESPSRSLASERTKERINMCIEKNYKDSLNK------ 314
Query: 215 ICSCAIDSVKAGGSVLIPIN-RVGVFLQLLEQIAIFME---CSSLKIPIYIISSVAEELL 270
ICS + ++K+ G VLIP++ FL+L+E I + + ++ I+ I ++
Sbjct: 315 ICSIVLRTIKSKGCVLIPVDLHFLYFLELIELIGVVISKYLAKEEQVLIFTIIGNISNVI 374
Query: 271 AYTNTIPEWLCKQRQEKL---------FSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNW 321
+ EW+ + R++K FS D + + +LI I+ + +
Sbjct: 375 HQADLCAEWVEESRKKKCSKVSNPQGPFSIDIMIKNNRLITGNDINDVTKL--------F 426
Query: 322 QEPCIVFSPHWSLRLGPTIHLLRRWS-GDHNSLLVLENEVDAELAVLPF 369
+ PC+ F SLR + LL +W+ ++NSLL+++ D + PF
Sbjct: 427 RYPCVCFVQDSSLRFFESSTLLEKWAMEENNSLLLIDPYYDPVSVLDPF 475
>gi|389583292|dbj|GAB66027.1| hypothetical protein PCYB_081880 [Plasmodium cynomolgi strain B]
Length = 878
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 129/304 (42%), Gaps = 61/304 (20%)
Query: 113 ILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFA-SGHAMDFDYRAIQGSDLILYSDL 171
I+ I +SSG +G+CN+++ N+ I+ S + H D ++ +D +L++
Sbjct: 300 IVCITPYSSGYSLGSCNFVVKTDLMNLCIINKSCYNIKRHPSTLDLTCLEKADFVLFTAY 359
Query: 172 SSLDST------------------EDIDQSSFSDDNNN------------WEELMNSL-- 199
D++ E ++S+ S N E +N
Sbjct: 360 VKGDTSTGEPPQSGNAPSGGASKGESPNRSTPSGSAQNSSVPSEGPPSERTREKINMCIE 419
Query: 200 SNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPIN-RVGVFLQLLEQIAIFME---CSSL 255
NY +S+ + ICS + ++K+ G VLIP++ FL+L+E I + +
Sbjct: 420 KNYKDSLNK------ICSIVLRTIKSKGCVLIPVDLNFLYFLELIELIGVVISKYLAKEE 473
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKL---------FSGDPLFAHVKLIKEKKI 306
++ I+ I ++ + EW+ + R++K FS + + + +LI I
Sbjct: 474 QVLIFTIIGNINNVIHQADLCAEWVEESRKKKCSKISNPQGPFSIEIMIKNNRLITGNDI 533
Query: 307 HVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWS-GDHNSLLVLENEVDAELA 365
+ + ++ PC+ F SLR + LL +W+ ++NSLL+++ D
Sbjct: 534 NDISKL--------FRYPCVCFVQDSSLRFFESSTLLEKWAMEENNSLLLIDPYYDPVAV 585
Query: 366 VLPF 369
+ PF
Sbjct: 586 LAPF 589
>gi|426327392|ref|XP_004024502.1| PREDICTED: integrator complex subunit 11 isoform 2 [Gorilla gorilla
gorilla]
Length = 606
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 82 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 113
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 114 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 164
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 165 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 215
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 216 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 256
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 257 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 309
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 310 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 356
>gi|126649161|ref|XP_001388253.1| hypothetical protein [Cryptosporidium parvum Iowa II]
gi|126117175|gb|EAZ51275.1| hypothetical protein cgd5_550 [Cryptosporidium parvum Iowa II]
Length = 1002
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 86/158 (54%), Gaps = 12/158 (7%)
Query: 221 DSVKAGGSVLIPINRVGVF-LQLLEQIA--IFMECSSLKIPIYIISSVAEELLAYTNTIP 277
D++ GS+LIPI+ G+ L+++E I I +++P+YII +L +
Sbjct: 574 DTLNKNGSILIPIDCFGLLCLEIVEFIGQKISELTMPIQVPMYIIGGGISTILLNADISS 633
Query: 278 EWLCKQRQEKLFSGDP----LFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWS 333
EW + R K+ +P LF+ +K K +++ F ++ +L ++EP I F+ + +
Sbjct: 634 EWTSQSRTRKVMLPNPNPPFLFSFLK--KSNRLYTFHTLN--ELSTVYREPAIFFATNSN 689
Query: 334 LRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK 370
++ GP+ L + + + +N+L+++++ VD E + FK
Sbjct: 690 MKFGPSYDLYKTLNKNPNNTLIIIDSLVDFENFINNFK 727
>gi|338722203|ref|XP_001496423.3| PREDICTED: integrator complex subunit 11 [Equus caballus]
Length = 571
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 126/352 (35%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 47 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 78
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 79 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 129
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 130 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 180
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 181 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 221
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 222 LLETFWERVNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 274
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 275 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 321
>gi|118572556|sp|Q2YDM2.2|INT11_BOVIN RecName: Full=Integrator complex subunit 11; Short=Int11; AltName:
Full=Cleavage and polyadenylation-specific factor 3-like
protein; Short=CPSF3-like protein
gi|158455110|gb|AAI10156.2| CPSF3L protein [Bos taurus]
Length = 599
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 125/352 (35%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T+ I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTQPTQAICPILLEDY---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + + SL TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAW---------IDKCRPSLLITESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMDLKAPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADSPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|274326663|ref|NP_001094578.1| integrator complex subunit 11 [Bos taurus]
gi|152941100|gb|ABS44987.1| related to CPSF subunits 68 kDa [Bos taurus]
Length = 599
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 125/352 (35%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T+ I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTQPTQAICPILLEDY---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + + SL TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAW---------IDKCRPSLLITESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMDLKAPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADSPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|440911726|gb|ELR61363.1| Integrator complex subunit 11 [Bos grunniens mutus]
Length = 599
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 125/352 (35%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T+ I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTQPTQAICPILLEDY---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + + SL TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAW---------IDKCRPSLLITESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMDLKAPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADSPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|426240429|ref|XP_004014105.1| PREDICTED: integrator complex subunit 11 [Ovis aries]
Length = 515
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T+ I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTQPTQAICPILLEDY---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E LK PIY + + E+ Y W Q+ K F +F + K
Sbjct: 251 LLETFWERMDLKAPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMF------EFK 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADSPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|359319514|ref|XP_003639102.1| PREDICTED: integrator complex subunit 11-like [Canis lupus
familiaris]
Length = 600
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 126/352 (35%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHEAVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|15029864|gb|AAH11155.1| Cleavage and polyadenylation specific factor 3-like [Mus musculus]
Length = 600
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 126/352 (35%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVADHLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRTFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|281348165|gb|EFB23749.1| hypothetical protein PANDA_020173 [Ailuropoda melanoleuca]
Length = 591
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 126/352 (35%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 67 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 98
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 99 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 149
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 150 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDRCRPNLLI---------TESTYATT 200
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 201 IRDSKRCRER--DFLKKVHEAVER-----------------GGKVLIPVFALGRAQELCI 241
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 242 LLETFWERMNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 294
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 295 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 341
>gi|301788922|ref|XP_002929872.1| PREDICTED: integrator complex subunit 11-like [Ailuropoda
melanoleuca]
Length = 600
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 126/352 (35%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDRCRPNLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHEAVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|296479091|tpg|DAA21206.1| TPA: cleavage and polyadenylation specific factor 3-like [Bos
taurus]
Length = 599
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 125/352 (35%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T+ I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTQPTQAICPILLEDY---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKXGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + + SL TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAW---------IDKCRPSLLITESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMDLKAPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADSPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|207079923|ref|NP_001128922.1| DKFZP459J1110 protein [Pongo abelii]
gi|56403907|emb|CAI29738.1| hypothetical protein [Pongo abelii]
Length = 600
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/352 (19%), Positives = 126/352 (35%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYVTHPTQAICPILLEDY---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ T ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TGSTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|119576648|gb|EAW56244.1| cleavage and polyadenylation specific factor 3-like, isoform CRA_j
[Homo sapiens]
Length = 476
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 103/265 (38%), Gaps = 40/265 (15%)
Query: 92 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 151
+KDC+ KV + + + L IKA+ +G +GA + I ++ Y N
Sbjct: 2 IKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVVYTGDYNMTPDR 61
Query: 152 AMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEK 211
+ + +L++ TE ++ D E + L E+VE
Sbjct: 62 HLGAAWIDKCRPNLLI---------TESTYATTIRDSKRCRER--DFLKKVHETVER--- 107
Query: 212 LAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLA 271
GG VLIP+ +G +L + F E +LK+PIY + + E+
Sbjct: 108 --------------GGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANH 153
Query: 272 YTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPH 331
Y W Q+ K F +F K I F + + P +VF+
Sbjct: 154 YYKLFIPW-TNQKIRKTFVQRNMFEF------KHIKAF-----DRAFADNPGPMVVFATP 201
Query: 332 WSLRLGPTIHLLRRWSGDHNSLLVL 356
L G ++ + R+W+G+ +++++
Sbjct: 202 GMLHAGQSLQIFRKWAGNEKNMVIM 226
>gi|431922648|gb|ELK19568.1| Integrator complex subunit 11 [Pteropus alecto]
Length = 603
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 126/352 (35%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDEELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIRVGSESVVYTGDYNMTPDRHLGAAWIDRCRPNLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|56403864|emb|CAI29717.1| hypothetical protein [Pongo abelii]
Length = 600
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/353 (19%), Positives = 127/353 (35%), Gaps = 79/353 (22%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQ-RQEKLFSGDPLFAHVKLIKE 303
+ F E +LK+PIY + + E+ Y W ++ R+ + F H+K
Sbjct: 251 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPWTNQKIRKTSVQRNMFEFKHIKAFD- 309
Query: 304 KKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
+ + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 310 ------------RAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|260790823|ref|XP_002590440.1| hypothetical protein BRAFLDRAFT_289082 [Branchiostoma floridae]
gi|229275634|gb|EEN46451.1| hypothetical protein BRAFLDRAFT_289082 [Branchiostoma floridae]
Length = 597
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/353 (19%), Positives = 127/353 (35%), Gaps = 79/353 (22%)
Query: 6 LPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELEL 65
LP++T M G+ IY+T I +++E+
Sbjct: 68 LPYMTEMVGYDGPIYMTHPTKAICPILLEDY----------------------------- 98
Query: 66 LPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDI 125
RKI + G E +KDC+ KV + + + L IKA+ +G +
Sbjct: 99 -----RKITVDRKG-ESQANFFTSQMIKDCMKKVIPVNLHQTVQVDDELEIKAYYAGHVL 152
Query: 126 GACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSF 185
GA ++I ++ Y N + + DL++ TE ++
Sbjct: 153 GAAMFLIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------TESTYATTI 203
Query: 186 SDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQ 245
D E + L E++E+ GG VLIP+ +G +L
Sbjct: 204 RDSKRCRER--DFLKKVHETIEK-----------------GGKVLIPVFALGRAQELCIL 244
Query: 246 IAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL--FAHVKLIKE 303
+ F E ++K PIY + + E+ Y W Q+ K F + F H+K
Sbjct: 245 LETFWERMNIKAPIYFSTGLTEKANNYYRLFITW-TNQKIRKTFVKRNMFEFKHIKAFDR 303
Query: 304 KKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I + P +VF+ L G ++ + ++W+ D +++++
Sbjct: 304 SYI-------------DNPGPMVVFATPGMLHAGLSLQIFKKWAPDSKNMVIM 343
>gi|410989914|ref|XP_004001198.1| PREDICTED: LOW QUALITY PROTEIN: integrator complex subunit 11
[Felis catus]
Length = 598
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHEAVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK PIY + + E+ Y W Q+ K F +F + K
Sbjct: 251 LLETFWERMNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMF------EFK 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|301618510|ref|XP_002938656.1| PREDICTED: integrator complex subunit 11 isoform 1 [Xenopus
(Silurana) tropicalis]
gi|301618512|ref|XP_002938657.1| PREDICTED: integrator complex subunit 11 isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 600
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/352 (19%), Positives = 129/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+++ M G+ IY+T I +++E+ YR+ ++ E
Sbjct: 76 ALPYMSEMVGYDGPIYMTHPTKAICPILLED-------YRKITVDKKG---------ETN 119
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
S + +KDC+ KV + + + L IKA+ +G
Sbjct: 120 FFTSQM---------------------IKDCMKKVVAVNLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + DL++ +E ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------SESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE+ GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVEK-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNDKNMVIM 350
>gi|355680857|gb|AER96662.1| cleavage and polyadenylation specific factor 3-like protein
[Mustela putorius furo]
Length = 440
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 126/352 (35%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 85 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 116
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 117 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 167
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 168 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 218
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 219 IRDSKRCRER--DFLKKVHEAVER-----------------GGKVLIPVFALGRAQELCI 259
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 260 LLETFWERMNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 312
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 313 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 359
>gi|350585498|ref|XP_003127541.3| PREDICTED: integrator complex subunit 11-like [Sus scrofa]
Length = 599
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/352 (19%), Positives = 125/352 (35%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T+ I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTQPTQAICPILLEDY---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ K + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKAVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMDLKAPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADSPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|344283025|ref|XP_003413273.1| PREDICTED: integrator complex subunit 11-like [Loxodonta africana]
Length = 719
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/351 (20%), Positives = 126/351 (35%), Gaps = 77/351 (21%)
Query: 6 LPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELEL 65
LP+ + M G+ IY+T I +++E+
Sbjct: 196 LPYFSEMVGYDGPIYMTPPTQAICPILLEDY----------------------------- 226
Query: 66 LPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDI 125
RKIA+ + G +KDC+ KV + + + L IKA+ +G +
Sbjct: 227 -----RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVL 278
Query: 126 GACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSF 185
GA + I ++ Y N + + +L++ TE ++
Sbjct: 279 GAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDRCRPNLLI---------TESTYATTI 329
Query: 186 SDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQ 245
D E + L E+VE GG VLIP+ +G +L
Sbjct: 330 RDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCIL 370
Query: 246 IAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKK 305
+ F E +LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 371 LETFWERMNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------KH 423
Query: 306 IHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 424 IKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 469
>gi|417403203|gb|JAA48419.1| Putative mrna cleavage and polyadenylation factor ii complex brr5
cpsf subunit [Desmodus rotundus]
Length = 603
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 125/352 (35%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDEELQIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPTLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|449268484|gb|EMC79348.1| Integrator complex subunit 11 [Columba livia]
Length = 600
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+ YR+ ++ E
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTKAICPILLED-------YRKITVDKKG---------ETN 119
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
S + +KDC+ KV + + + L IKA+ +G
Sbjct: 120 FFTSQM---------------------IKDCMKKVVAVHLHQTVQVDEELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + DL++ TE ++
Sbjct: 159 LGAAMFQIKVGCESVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|326932364|ref|XP_003212289.1| PREDICTED: integrator complex subunit 11-like [Meleagris gallopavo]
Length = 600
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+ YR+ ++ E
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTKAICPILLED-------YRKITVDKKG---------ETN 119
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
S + +KDC+ KV + + + L IKA+ +G
Sbjct: 120 FFTSQM---------------------IKDCMKKVVAVHLHQTVQVDEELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + DL++ TE ++
Sbjct: 159 LGAAMFQIKVGCESVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|61098197|ref|NP_001012854.1| integrator complex subunit 11 [Gallus gallus]
gi|75571225|sp|Q5ZIH0.1|INT11_CHICK RecName: Full=Integrator complex subunit 11; Short=Int11; AltName:
Full=Cleavage and polyadenylation-specific factor 3-like
protein; Short=CPSF3-like protein
gi|53135966|emb|CAG32473.1| hypothetical protein RCJMB04_26e19 [Gallus gallus]
Length = 600
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+ YR+ ++ E
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTKAICPILLED-------YRKITVDKKG---------ETN 119
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
S + +KDC+ KV + + + L IKA+ +G
Sbjct: 120 FFTSQM---------------------IKDCMKKVVAVHLHQTVQVDEELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + DL++ TE ++
Sbjct: 159 LGAAMFQIKVGCESVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|209875945|ref|XP_002139415.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209555021|gb|EEA05066.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 875
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 135/310 (43%), Gaps = 30/310 (9%)
Query: 161 QGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAI 220
+ S+++ Y + S+ E I + ++ N +L N LS Y + ++ I +
Sbjct: 432 EASNVVFYGSMISIKQAEYIHKIV---ESTNIVQLSN-LSYY------LTEIKIILNYIK 481
Query: 221 DSVKAGGSVLIPINRVGVF-LQLLEQIAIFMECSSLK--IPIYIISSVAEELLAYTNTIP 277
++ GS+LIP + G + ++L+E I ++ ++ +PIYI+ +L+ +
Sbjct: 482 HTLYRSGSILIPTDLYGQYCMELIEYIGQYVSELPIQYQVPIYIVGGGISTILSNADVSS 541
Query: 278 EWLCKQRQEKLFSGDPL--FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLR 335
EW C + K +P+ F +L +++ F + +L + ++EP I F+ L
Sbjct: 542 EWTCSNKSRKSMLPNPISPFLFSQLKSSNRLYTFHTIE--ELSIVYREPAIFFASSSDLS 599
Query: 336 LGPTIHLLRR-WSGDHNSLLVLENEVDAELAVLPFKPISMKV--LQCSFLSGKKLQKVQP 392
GP I +L + +S N+LL ++ D + + + K+ ++ + +
Sbjct: 600 FGPWIRILNQLYSDPKNTLLTIDPCTDISYLTMKYNLNNDKIDHIELVYFPLILFPTLNS 659
Query: 393 LLKIL-------QPKL-VLFPEEWRTHVSFSDVTSFSVSHYSENETIHIPSLKESAELEI 444
L+ + PK VL P H SDV +F + + + + + +P ++
Sbjct: 660 LMTEIFNNHNSKNPKFKVLIPLNKNNHSEDSDVINFPIEY--KTKILEVPRQIQTLTRRS 717
Query: 445 AADIASKFQW 454
+ K+ W
Sbjct: 718 NDENGVKYNW 727
>gi|302793925|ref|XP_002978727.1| hypothetical protein SELMODRAFT_109555 [Selaginella moellendorffii]
gi|300153536|gb|EFJ20174.1| hypothetical protein SELMODRAFT_109555 [Selaginella moellendorffii]
Length = 522
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 120/314 (38%), Gaps = 62/314 (19%)
Query: 54 GPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKV------QTLRF 104
GP +M + L P L RKI + G E H++ C+ KV QT+R
Sbjct: 84 GPVYMTYPTKALAPIMLEDYRKIMVDRRGEEEQFS---TLHIQQCMKKVIAVDLRQTIRV 140
Query: 105 GEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSD 164
++ L +A+ +G +GA + + + Y N +
Sbjct: 141 SKD------LAFRAYYAGHVLGAAMFYVKAGNSTVVYTGDYNMTPDRHL----------- 183
Query: 165 LILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEE--MEKLAFICSCAIDS 222
ID+ +L+ + S Y ++ E + K A +
Sbjct: 184 -----------GAAQIDRLK--------PDLLITESTYATTIRESRLAKEAEFLNVVHTC 224
Query: 223 VKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCK 282
V GG VLIPI+ +G +L + + E +LK+PIY + + + AY + W
Sbjct: 225 VSKGGKVLIPISALGRAQELCILLDEYWERMNLKVPIYFSAGLTMQSNAYYKLLISW-TN 283
Query: 283 QRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHL 342
QR + + F HVFP + ++ PCI+F+ L G ++ +
Sbjct: 284 QRIKDTYVTRNAFDFK--------HVFPF---DRTQLDGNGPCILFATPGMLTGGLSLEV 332
Query: 343 LRRWSGDHNSLLVL 356
L+ W+ +LL++
Sbjct: 333 LKHWAPVEQNLLII 346
>gi|417403209|gb|JAA48422.1| Putative mrna cleavage and polyadenylation factor ii complex brr5
cpsf subunit [Desmodus rotundus]
Length = 604
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/354 (19%), Positives = 123/354 (34%), Gaps = 80/354 (22%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKIAVDKKGE---ANFFTSQMIKDCMKKVVAVHLHQTVQVDEELQIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPTLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL--FAHVKLIK 302
+ F E +LK PIY + + E+ Y W Q+ K F + F H+K
Sbjct: 251 LLETFWERMNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEFKHIKAFD 309
Query: 303 EKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 310 RAXXXAHPCA------------MVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 351
>gi|440801023|gb|ELR22048.1| cleavage and polyadenylation specific factor 3like, putative
[Acanthamoeba castellanii str. Neff]
Length = 657
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/352 (19%), Positives = 130/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ T M G+ IY+T I +++E+ YR+ E G E
Sbjct: 75 ALPYFTEMCGYDGPIYMTHPTKAICPILLED-------YRKI--TVERKG-------ETN 118
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
S + +KDC+ KV L + + L I+A+ +G
Sbjct: 119 FFTSQM---------------------IKDCMKKVVGLNVHQTVQVDEELEIRAYYAGHV 157
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + + ++ Y N + + D+++ TE ++
Sbjct: 158 LGAAMFYVRVGDQSVVYTGDYNMTPDRHLGAAWIEKLRPDVLI---------TESTYATT 208
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D+ W E + L + SC V+ GG VLIP+ +G +L
Sbjct: 209 IR-DSKRW--------------RERDFLKRVHSC----VEKGGKVLIPVFALGRAQELCI 249
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ + E +L +PIY + + E+ Y W ++ + F H + K
Sbjct: 250 LLETYWERMNLTVPIYFSAGLTEKATNYYKLFIHWTNEKIKRT-------FVHRNMFDFK 302
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + L + P ++F+ L G ++ + ++W+ + +L+++
Sbjct: 303 HISTF-----ERGLADQPGPMVLFATPGMLHAGTSLEVFKKWAPNEKNLVII 349
>gi|83314583|ref|XP_730423.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23490141|gb|EAA21988.1| Drosophila melanogaster CG5222 gene product [Plasmodium yoelii
yoelii]
Length = 759
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 39/217 (17%)
Query: 185 FSDDNNNWEELMNSLSNYDESVEEM-----------------EKLAFICSCAIDSVKAGG 227
S+D+NN ++L N +N E+ E + + L ICS + ++K G
Sbjct: 222 LSNDSNNSKKLSNDFNNCKETNENINEKISNKINVCFDKTYKDTLNKICSIVLKTIKKKG 281
Query: 228 SVLIPINRVGV-FLQLLEQIAIFMECSSLKIPIYIISSVA---EELLAYTNTIPEWLCKQ 283
VLIP++ + FL+L+E I + + K +I SV ++ + EW+ +
Sbjct: 282 CVLIPVDLCYLYFLELVELIGVIISKYLTKDEQVLIFSVMPNINNIIHQADLCAEWVEES 341
Query: 284 RQEKL---------FSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSL 334
+++K FS D + + +LI E I+ + N++ PC+ F +L
Sbjct: 342 KKKKCSQISNPQGPFSIDIMIKNNRLIVENSIN--------DISKNFRYPCVCFIQDSTL 393
Query: 335 RLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK 370
R LL +W D +NS+++L+ D + P+K
Sbjct: 394 RFSEANILLEKWGMDQNNSIILLDPYYDPISVLYPYK 430
>gi|158298905|ref|XP_319042.4| AGAP009923-PA [Anopheles gambiae str. PEST]
gi|157014111|gb|EAA13845.4| AGAP009923-PA [Anopheles gambiae str. PEST]
Length = 608
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/354 (19%), Positives = 132/354 (37%), Gaps = 81/354 (22%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP++T M G++ IY+T I +++E++
Sbjct: 76 ALPYMTEMVGYTGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RK+A+ G E P + +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKVAVERKG-ESNFFTPQM--IKDCMKKVIAVTLHQSVMVDSELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + DL++ TE ++
Sbjct: 159 LGAAMFWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCKPDLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D + E + L + C V GG VLIP+ +G +L
Sbjct: 210 IRDS---------------KRCRERDFLKKVHEC----VAKGGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL--FAHVKLIK 302
+ + E +LK P+Y + E+ Y W Q+ K F + F H+K
Sbjct: 251 LLETYWERMNLKYPVYFAVGLTEKANNYYKMFITW-TNQKIRKTFVQRNMFDFKHIKPFD 309
Query: 303 EKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
+ I +P + +VF+ L G ++ + ++W+ + N+++++
Sbjct: 310 KGYI------DNPGAM-------VVFATPGMLHAGLSLQIFKKWAPNENNMVIM 350
>gi|302787435|ref|XP_002975487.1| hypothetical protein SELMODRAFT_52099 [Selaginella moellendorffii]
gi|300156488|gb|EFJ23116.1| hypothetical protein SELMODRAFT_52099 [Selaginella moellendorffii]
Length = 517
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 119/314 (37%), Gaps = 62/314 (19%)
Query: 54 GPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKV------QTLRF 104
GP +M + L P L RKI + G E H++ C+ KV QT+R
Sbjct: 79 GPVYMTYPTKALAPIMLEDYRKIMVDRRGEEEQFS---TLHIQQCMKKVIAVDLRQTIRV 135
Query: 105 GEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSD 164
+ L +A+ +G +GA + + + Y N +
Sbjct: 136 SRD------LAFRAYYAGHVLGAAMFYVKAGNSTVVYTGDYNMTPDRHL----------- 178
Query: 165 LILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEE--MEKLAFICSCAIDS 222
ID+ +L+ + S Y ++ E + K A +
Sbjct: 179 -----------GAAQIDRLK--------PDLLITESTYATTIRESRLAKEAEFLNVVHTC 219
Query: 223 VKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCK 282
V GG VLIPI+ +G +L + + E +LK+PIY + + + AY + W
Sbjct: 220 VSKGGKVLIPISALGRAQELCILLDEYWERMNLKVPIYFSAGLTMQSNAYYKLLISW-TN 278
Query: 283 QRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHL 342
QR + + F HVFP + ++ PCI+F+ L G ++ +
Sbjct: 279 QRIKDTYVTRNAFDFK--------HVFPF---DRTQLDGPGPCILFATPGMLTGGLSLEV 327
Query: 343 LRRWSGDHNSLLVL 356
L+ W+ +LL++
Sbjct: 328 LKHWAPVEQNLLII 341
>gi|170052069|ref|XP_001862054.1| cleavage and polyadenylation specificity factor subunit 3 [Culex
quinquefasciatus]
gi|167873079|gb|EDS36462.1| cleavage and polyadenylation specificity factor subunit 3 [Culex
quinquefasciatus]
Length = 615
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/354 (19%), Positives = 129/354 (36%), Gaps = 81/354 (22%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP++T M G++ IY+T I +++E++
Sbjct: 76 ALPYMTEMVGYTGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RK+A+ G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKVAVERKGES---NFFTTQMIKDCMKKVVAVTLHQSVMVDSELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + DL++ TE ++
Sbjct: 159 LGAAMFWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCKPDLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D + E + L + C V GG VLIP+ +G +L
Sbjct: 210 IRDS---------------KRCRERDFLKKVHEC----VAKGGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL--FAHVKLIK 302
+ + E +LK P+Y + E+ Y W Q+ K F + F H+K
Sbjct: 251 LLETYWERMNLKYPVYFAVGLTEKANNYYKMFITW-TNQKIRKTFVQRNMFDFKHIKPFD 309
Query: 303 EKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
+ I +P + +VF+ L G ++ + ++W+ + N+++++
Sbjct: 310 KGYI------DNPGAM-------VVFATPGMLHAGLSLQIFKKWAPNENNMVIM 350
>gi|312381513|gb|EFR27247.1| hypothetical protein AND_06171 [Anopheles darlingi]
Length = 624
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 70/354 (19%), Positives = 132/354 (37%), Gaps = 81/354 (22%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP++T M G++ IY+T I +++E++
Sbjct: 76 ALPYMTEMVGYTGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RK+A+ G E P + +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKVAVERKG-ESNFFTPQM--IKDCMKKVIAVTLHQSVMVDSELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + DL++ TE ++
Sbjct: 159 LGAAMFWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCKPDLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D + E + L + C V GG VLIP+ +G +L
Sbjct: 210 IRDS---------------KRCRERDFLKKVHEC----VAKGGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL--FAHVKLIK 302
+ + E +LK P+Y + E+ Y W Q+ K F + F H+K
Sbjct: 251 LLETYWERMNLKYPVYFAVGLTEKANNYYKMFITW-TNQKIRKTFVQRNMFDFKHIKPFD 309
Query: 303 EKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
+ I +P + +VF+ L G ++ + ++W+ + N+++++
Sbjct: 310 KGYI------DNPGAM-------VVFATPGMLHAGLSLQIFKKWAPNENNMVIM 350
>gi|432866809|ref|XP_004070946.1| PREDICTED: integrator complex subunit 11-like [Oryzias latipes]
Length = 599
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 69/352 (19%), Positives = 126/352 (35%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+++ M G+ IY+T I +++E+
Sbjct: 76 ALPYMSEMVGYDGPIYMTHPTKAICPILLEDF---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKI + + G +KDC+ KV L + + L IKA+ +G
Sbjct: 108 ------RKITVDKKGET---NFFTSQMIKDCMKKVVPLNLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA I ++ Y N + + D+++ +E ++
Sbjct: 159 LGAAMVYIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPDILI---------SESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L ES+E GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHESIER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKAPIYFSTGMTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F ++ + P +VF+ L G ++ + ++W+G+ +++++
Sbjct: 304 HIKAFDRSYA-----DNPGPMVVFATPGMLHAGQSLQIFKKWAGNEKNMVIM 350
>gi|410928941|ref|XP_003977858.1| PREDICTED: integrator complex subunit 11-like [Takifugu rubripes]
Length = 601
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 70/352 (19%), Positives = 126/352 (35%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LPF++ M G+ IY+T I +++E+
Sbjct: 76 ALPFMSEMVGYDGPIYMTHPTKAICPILLEDF---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKI + + G +KDC+ KV L + + L IKA+ +G
Sbjct: 108 ------RKITVDKKGET---NFFTSQMIKDCMKKVVPLNLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA I ++ Y N + + D+++ +E ++
Sbjct: 159 LGAAMVQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPDILI---------SESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L ES+E GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHESIER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F ++ + P +VF+ L G ++ + ++W+G+ +++++
Sbjct: 304 HIKAFDRSYA-----DNPGPMVVFATPGMLHAGQSLQIFKKWAGNEKNMVIM 350
>gi|224079882|ref|XP_002197797.1| PREDICTED: integrator complex subunit 11 [Taeniopygia guttata]
Length = 600
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 102/265 (38%), Gaps = 40/265 (15%)
Query: 92 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 151
+KDC+ KV + + + L IKA+ +G +GA + I ++ Y N
Sbjct: 126 IKDCMKKVVAVHLHQTVQVDEELEIKAYYAGHVLGAAMFQIKVGCESVVYTGDYNMTPDR 185
Query: 152 AMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEK 211
+ + DL++ TE ++ D E + L E+VE
Sbjct: 186 HLGAAWIDKCRPDLLI---------TESTYATTIRDSKRCRER--DFLKKVHETVER--- 231
Query: 212 LAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLA 271
GG VLIP+ +G +L + F E +LK PIY + + E+
Sbjct: 232 --------------GGKVLIPVFALGRAQELCILLETFWERMNLKAPIYFSTGLTEKANH 277
Query: 272 YTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPH 331
Y W Q+ K F +F K I F + + P +VF+
Sbjct: 278 YYKLFITW-TNQKIRKTFVQRNMFEF------KHIKAF-----DRAFADNPGPMVVFATP 325
Query: 332 WSLRLGPTIHLLRRWSGDHNSLLVL 356
L G ++ + R+W+G+ +++++
Sbjct: 326 GMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|157107341|ref|XP_001649735.1| cleavage and polyadenylation specificity factor [Aedes aegypti]
gi|108879612|gb|EAT43837.1| AAEL004757-PA [Aedes aegypti]
Length = 613
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 69/354 (19%), Positives = 129/354 (36%), Gaps = 81/354 (22%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP++T M G++ IY+T I +++E++
Sbjct: 76 ALPYMTEMIGYTGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RK+A+ G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKVAVERKGES---NFFTTQMIKDCMKKVIAVTLHQSVMVDSELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + DL++ TE ++
Sbjct: 159 LGAAMFWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCKPDLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D + E + L + C V GG VLIP+ +G +L
Sbjct: 210 IRDS---------------KRCRERDFLKKVHEC----VAKGGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL--FAHVKLIK 302
+ + E +LK PIY + E+ Y W Q+ K F + F H+K
Sbjct: 251 LLETYWERMNLKYPIYFAVGLTEKANNYYKMFITW-TNQKIRKTFVQRNMFDFKHIKPFD 309
Query: 303 EKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
+ I +P + +VF+ L G ++ + ++W+ + N+++++
Sbjct: 310 KGYI------DNPGAM-------VVFATPGMLHAGLSLQIFKKWAPNENNMVIM 350
>gi|34783058|gb|AAH00675.2| CPSF3L protein, partial [Homo sapiens]
Length = 473
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 101/263 (38%), Gaps = 40/263 (15%)
Query: 94 DCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAM 153
DC+ KV + + + L IKA+ +G +GA + I ++ Y N +
Sbjct: 1 DCMKKVVAVHLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVVYTGDYNMTPDRHL 60
Query: 154 DFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLA 213
+ +L++ TE ++ D E + L E+VE
Sbjct: 61 GAAWIDKCRPNLLI---------TESTYATTIRDSKRCRER--DFLKKVHETVER----- 104
Query: 214 FICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYT 273
GG VLIP+ +G +L + F E +LK+PIY + + E+ Y
Sbjct: 105 ------------GGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYY 152
Query: 274 NTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWS 333
W Q+ K F +F K I F + + P +VF+
Sbjct: 153 KLFIPW-TNQKIRKTFVQRNMFEF------KHIKAF-----DRAFADNPGPMVVFATPGM 200
Query: 334 LRLGPTIHLLRRWSGDHNSLLVL 356
L G ++ + R+W+G+ +++++
Sbjct: 201 LHAGQSLQIFRKWAGNEKNMVIM 223
>gi|355744837|gb|EHH49462.1| hypothetical protein EGM_00117, partial [Macaca fascicularis]
Length = 592
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/352 (19%), Positives = 125/352 (35%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 68 ALPYFSEMVGYDGPIYMTHPTQAICPILLEDY---------------------------- 99
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKIA+ + G +KDC+ K + + L IKA+ +G
Sbjct: 100 ------RKIAVDKKGE---ANFFTSQMIKDCMKKEVAGHLHQTVQVDDELEIKAYYAGHV 150
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + +L++ TE ++
Sbjct: 151 LGAAMFQIKVGSESVVYTGDYNMTPERHLGAAWIDKCRPNLLI---------TESTYATT 201
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 202 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 242
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK+PIY + + E+ Y W Q+ K F +F K
Sbjct: 243 LLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW-TNQKIRKTFVQRNMFEF------K 295
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 296 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 342
>gi|334321967|ref|XP_001364674.2| PREDICTED: integrator complex subunit 11-like [Monodelphis
domestica]
Length = 600
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/352 (19%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+ YR+ ++ E
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTKAICPILLED-------YRKITVDKKG---------ETN 119
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
S + +KDC+ KV + + + L IKA+ +G
Sbjct: 120 FFTSQM---------------------IKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I + Y N + + +L++ TE ++
Sbjct: 159 LGAAMFQIKVGSESAVYTGDYNMTPDRHLGAAWIDKCRPNLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK PIY + + E+ Y W Q+ K F +F + K
Sbjct: 251 LLETFWERMNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMF------EFK 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + R+W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIM 350
>gi|66472504|ref|NP_001018457.1| integrator complex subunit 11 [Danio rerio]
gi|82192739|sp|Q503E1.1|INT11_DANRE RecName: Full=Integrator complex subunit 11; Short=Int11; AltName:
Full=Cleavage and polyadenylation-specific factor 3-like
protein; Short=CPSF3-like protein
gi|63102425|gb|AAH95364.1| Zgc:110671 [Danio rerio]
Length = 598
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/352 (19%), Positives = 126/352 (35%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+++ M G+ IY+T I +++E+
Sbjct: 76 ALPYMSEMVGYDGPIYMTHPTKAICPILLEDF---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKI + + G +KDC+ KV L + + L IKA+ +G
Sbjct: 108 ------RKITVDKKGET---NFFTSQMIKDCMKKVVPLNLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA I ++ Y N + + D+++ +E ++
Sbjct: 159 LGAAMVQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPDILI---------SESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E+VE GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETVER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F ++ + P +VF+ L G ++ + ++W+G+ +++++
Sbjct: 304 HIKAFDRSYA-----DNPGPMVVFATPGMLHAGQSLQIFKKWAGNEKNMVIM 350
>gi|68075103|ref|XP_679468.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56500224|emb|CAH98858.1| conserved hypothetical protein [Plasmodium berghei]
Length = 848
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 100/223 (44%), Gaps = 39/223 (17%)
Query: 179 DIDQSSFSDDNNNWEELMNSLSNYDESVEEM-----------------EKLAFICSCAID 221
+I+QS +D+NN ++ N +N E+ E + + L ICS +
Sbjct: 307 EINQSVKKNDSNNSKKNSNDFNNCKETNENINDKISNKINVCFEKTYKDSLNKICSIVLK 366
Query: 222 SVKAGGSVLIPINRVGV-FLQLLEQIAIFMECSSLKIPIYIISSVA---EELLAYTNTIP 277
++K G VLIP++ + FL+L+E I + + K +I S ++ +
Sbjct: 367 TIKKKGCVLIPVDLCYLYFLELVELIGVIISKYLTKDEQVLIFSAMPNINNIIHQADLCA 426
Query: 278 EWLCKQRQEKL---------FSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVF 328
EW+ + +++K FS D + + +LI E I+ + N++ PC+ F
Sbjct: 427 EWVEESKKKKCSQISNPQGPFSIDIMIKNNRLIVENSIN--------DISKNFRYPCVCF 478
Query: 329 SPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK 370
+LR LL +W D +NS+++L+ D + P+K
Sbjct: 479 IQDSTLRFSEANILLEKWGMDQNNSIILLDPYYDPISVLYPYK 521
>gi|198413502|ref|XP_002128796.1| PREDICTED: similar to cleavage and polyadenylation specific factor
3-like [Ciona intestinalis]
Length = 605
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/415 (17%), Positives = 152/415 (36%), Gaps = 93/415 (22%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+++ M+G+ IY+T I +++E+ YR+ + E
Sbjct: 77 ALPYMSEMKGYDGPIYMTHPTKAICPILLED-------YRKITVDRKG---------ETN 120
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
S + +KDC+ KV + + + L IKA+ +G
Sbjct: 121 FFDSKM---------------------IKDCMKKVIPVNLHQTIHVDDQLEIKAYYAGHV 159
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA +++ ++ Y N + + D+++ TE ++
Sbjct: 160 LGAAMFLLKVGTDSVLYTGDYNMTPDRHLGAAWVDKCRPDVLI---------TESTYATT 210
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E VE+ GG VLIP+ +G +L
Sbjct: 211 IRDSKRCRER--DFLKKVHERVED-----------------GGKVLIPVFALGRAQELCI 251
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKE 303
+ + + +LK+PIY + + + Y W ++ ++ + F H+K
Sbjct: 252 LLESYWDRMNLKVPIYFSAGLTNKATEYYKLFITWTNQKIKDTFVERNMFDFKHIKEFNR 311
Query: 304 KKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLE------ 357
I + P +VF+ L G ++ + +RW + +++++
Sbjct: 312 SYI-------------DNPGPMVVFATPGMLHGGLSLEIFKRWCTNEKNMIIMPGYCVAG 358
Query: 358 ---NEVDAELAVLPFKP-----ISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLF 404
N++ + + + KP I M+V SF + + + L+++ +P V+
Sbjct: 359 TVGNKILSGMRKIELKPGQVVEIKMQVEYMSFSAHADAKGIMQLIRMCEPSNVML 413
>gi|195394529|ref|XP_002055895.1| GJ10637 [Drosophila virilis]
gi|194142604|gb|EDW59007.1| GJ10637 [Drosophila virilis]
Length = 597
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/352 (18%), Positives = 128/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+++ + G++ IY+T I +++E++
Sbjct: 76 ALPYMSEIVGYTGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RK+A+ G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKVAVERKGE---SNFFTTQMIKDCMKKVIPVTLHQSMMVDTDLEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + DL++ TE ++
Sbjct: 159 LGAAMFWIKVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D + E + L + C V GG VLIP+ +G +L
Sbjct: 210 IRDS---------------KRCRERDFLKKVHEC----VSKGGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ + E +LK PIY + E+ Y W ++ ++ F H + K
Sbjct: 251 LLETYWERMNLKYPIYFALGLTEKANTYYKMFITWTNQKIRKT-------FVHRNMFDFK 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F K ++ +VF+ L G ++ + ++W+ + N+++++
Sbjct: 304 HIKPF-----DKAYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNENNMVIM 350
>gi|124802126|ref|XP_001347374.1| conserved Plasmodium protein [Plasmodium falciparum 3D7]
gi|23494953|gb|AAN35287.1| conserved Plasmodium protein [Plasmodium falciparum 3D7]
Length = 915
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 22/181 (12%)
Query: 210 EKLAFICSCAIDSVKAGGSVLIPIN-RVGVFLQLLEQIAIFMECSSLK---IPIYIISSV 265
+ L ICS + ++K G VLIP++ F++L+E I + + K + I+ + S
Sbjct: 411 DSLNKICSLVLKTIKNKGCVLIPVDLHFLYFIELIELIGVIISKHLPKEEQVLIFSVLSN 470
Query: 266 AEELLAYTNTIPEWLCKQRQEKL---------FSGDPLFAHVKLIKEKKIHVFPAVHSPK 316
++++ N EW+ + R++K FS D + + +LI I+
Sbjct: 471 IQDVIHQLNLFAEWVEESRKKKCSKILNPQGPFSIDIMIKNNRLIIGNNIN--------D 522
Query: 317 LLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAELAVL-PFKPISMK 375
+ ++ PC+ F SLR + LL +W+ + N+ L+L + + VL PFK K
Sbjct: 523 ITKQFRYPCVCFIHDSSLRFFESSLLLEKWANEQNNTLILVDPFYDPIKVLYPFKIYEKK 582
Query: 376 V 376
+
Sbjct: 583 I 583
>gi|326435554|gb|EGD81124.1| integrator complex subunit 11 [Salpingoeca sp. ATCC 50818]
Length = 620
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LPF + M G+ IY+T I L++E+ YR+ + E G E
Sbjct: 109 ALPFFSEMCGYDKPIYMTYPTKAICPLLLED-------YRKI--SVERKG-------ERN 152
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
S + +KDC+SKVQ + + G + IKA+ +G
Sbjct: 153 FFTSQM---------------------IKDCMSKVQPVDLHQSVTLPGDIEIKAYYAGHV 191
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + + ++ Y N + + D I+ TE ++
Sbjct: 192 LGAAMFHVRVGDKSVVYTGDYNMTPDRHLGTAWIDFCQPDAII---------TESTYATT 242
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D + E + L + C VK GG VLIP+ +G +L
Sbjct: 243 IRDS---------------KRCRERDFLTKVHRC----VKNGGKVLIPVFALGRAQELCI 283
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ + E L PIY + + E+ Y + ++ ++ F L K
Sbjct: 284 LLETYWERYKLDTPIYFSTGLTEKANEYYRLFVMYTNQKIKDT-------FVDRNLFDFK 336
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F ++ + P ++F+ L G + + +W+GD ++++L
Sbjct: 337 HIRAFDRSYA-----DQPGPQVLFATPGMLHAGVALEVFAKWAGDPRNMVIL 383
>gi|348503157|ref|XP_003439132.1| PREDICTED: integrator complex subunit 11-like [Oreochromis
niloticus]
Length = 601
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/352 (19%), Positives = 126/352 (35%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+++ M G+ IY+T I +++E+
Sbjct: 76 ALPYMSEMVGYDGPIYMTHPTKAICPILLEDF---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKI + + G +KDC+ KV L + + L IKA+ +G
Sbjct: 108 ------RKITVDKKGET---NFFTSQMIKDCMKKVIPLNLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA I ++ Y N + + D+++ +E ++
Sbjct: 159 LGAAMVHIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPDILI---------SESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L ES+E GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHESIER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK PIY + + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKAPIYFSTGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F ++ + P +VF+ L G ++ + ++W+G+ +++++
Sbjct: 304 HIKAFDRSYA-----DNPGPMVVFATPGMLHAGQSLQIFKKWAGNEKNMVIM 350
>gi|300706889|ref|XP_002995677.1| hypothetical protein NCER_101357 [Nosema ceranae BRL01]
gi|239604869|gb|EEQ82006.1| hypothetical protein NCER_101357 [Nosema ceranae BRL01]
Length = 500
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 89/432 (20%), Positives = 161/432 (37%), Gaps = 110/432 (25%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LPF T + + IY+T+ + +++E+ +R+ A +SS ++ +++
Sbjct: 73 ALPFFTEICKYDGPIYMTKPTKAVIPILLED-------FRKI-SAPKSSDGKFFSYQD-- 122
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
+++C+ K+ T+ F E ++ I + +G
Sbjct: 123 ---------------------------IQNCLKKIITINFNETYKHDENFFITPYYAGHV 155
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
IGA + + ++ Y N M D S L DL +ST S
Sbjct: 156 IGAAMFHVQVGSRSVVYTGDYN------MTPDRHLGAASIPCLRPDLLITEST----YGS 205
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
+ D +E E K +D V GG VLIPI +G +L
Sbjct: 206 ITRDCRKSKE------------REFFK------AVLDCVSNGGKVLIPIFALGRAQELCL 247
Query: 245 QIAIFMECSSLKIPIYIISSVAE-------ELLAYTNTIPEWLCKQRQEKLFSGDPLFAH 297
+ E LK+PIY S + E + L+YTN E + K F H
Sbjct: 248 LLDSHWERMQLKVPIYFSSGLTEKANNIYKQFLSYTN---ETIKKNA----------FNH 294
Query: 298 VKLIKEKKIHVFPAVHSP---KLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLL 354
+VF H+ K ++ P ++F+ L G ++ + + W D +L+
Sbjct: 295 ---------NVFDFKHTTTFQKHFLDLNIPMVLFASPGMLHSGMSLKVFKEWCTDPKNLV 345
Query: 355 VLENEV------------DAELAVL-PFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKL 401
++ + E+ +L K I ++V +F + Q + L+K+ QPK
Sbjct: 346 IIPGYCVKGTVGDKVLNGNKEIEILGELKEIKIQVKNLAFSAHADAQGILNLIKMCQPKN 405
Query: 402 VLFPEEWRTHVS 413
V+ ++ +S
Sbjct: 406 VMLVHGEKSRIS 417
>gi|224129964|ref|XP_002328847.1| predicted protein [Populus trichocarpa]
gi|222839145|gb|EEE77496.1| predicted protein [Populus trichocarpa]
Length = 50
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
Query: 212 LAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK 256
L FI S ++SVKAGGSV+IP+N++G+ LQLLEQI +++E S++K
Sbjct: 7 LQFINS-QVNSVKAGGSVIIPLNQLGIVLQLLEQIPVYLESSAMK 50
>gi|193608339|ref|XP_001949326.1| PREDICTED: integrator complex subunit 11-like isoform 1
[Acyrthosiphon pisum]
gi|328710634|ref|XP_003244318.1| PREDICTED: integrator complex subunit 11-like isoform 2
[Acyrthosiphon pisum]
Length = 603
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 86/459 (18%), Positives = 165/459 (35%), Gaps = 103/459 (22%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
L +LT G+ IY+T I +++E++ +EY EE +
Sbjct: 79 ALSYLTEHLGYHGPIYMTHPTKAIAPILLEDMRKHLVEYE----------------EEAK 122
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
S+ ++DC+ KV + E + +KA+ +G
Sbjct: 123 YFTSSA---------------------IRDCMKKVTAVNLHEVVTVKDDIELKAYYAGHV 161
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y + + + L++ TE ++
Sbjct: 162 LGAAMFYIKVGNDSVVYTGDFSMTPDRHLGAAWIDKCRPTLLI---------TESTYATT 212
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L N E ++ GG VLIPI +G +L
Sbjct: 213 IRDSKRCRER--DFLKNVHECIDR-----------------GGKVLIPIFALGRAQELCI 253
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKE 303
I + + LK+P+Y + + E+ +Y W ++ ++ + F H+K +
Sbjct: 254 LIDTYWDRMGLKVPVYFAAGLTEKANSYYKMFITWTNQKVRQTFVQRNMFDFKHIKPFDK 313
Query: 304 KKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLL--------- 354
+H+P P +VF+ L G ++++ ++W+ D ++L
Sbjct: 314 ------TYMHNPG-------PMVVFATPGMLHAGLSLNIFKKWAPDEKNMLIVPGYCVSG 360
Query: 355 -----VLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLF---PE 406
VL E F + M V SF + + + L+K +P+ VL E
Sbjct: 361 TVGNKVLSGSKKIEAEPNKFIDVKMSVEYLSFSAHADGKGIIQLIKNCEPQNVLLVHGEE 420
Query: 407 EWRTHVSFSDVTSFSVSHYSENETIHIPSLKESAELEIA 445
E + + F+++ Y +P+ E+ E+E A
Sbjct: 421 EKMKFLRAKIMQEFNINCY-------MPANGETVEIETA 452
>gi|340381556|ref|XP_003389287.1| PREDICTED: integrator complex subunit 11-like [Amphimedon
queenslandica]
Length = 610
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 78/420 (18%), Positives = 149/420 (35%), Gaps = 104/420 (24%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEEL--ICMNMEYRQFYGAEESSGPQWMKWEE 62
LP+ T M G++ IY+T I +++E+ +C++ + Q + +
Sbjct: 77 ALPYFTEMCGYNGPIYMTHPTKAICPVLLEDFRRVCVDKKGEQNFFTSQM---------- 126
Query: 63 LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSG 122
+KDC+ KV T+ + + L IKA+ +G
Sbjct: 127 -----------------------------IKDCMRKVITVNLHQCVKVDDQLEIKAYYAG 157
Query: 123 LDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQ 182
+GA + + ++ Y N + + DL++ TE
Sbjct: 158 HVLGAAMFHVRVGHQSVVYTGDYNMTPDRHLGSAWIDRCRPDLLI---------TESTYA 208
Query: 183 SSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQL 242
++ D E + L E +E G VLIP+ +G +L
Sbjct: 209 TTIRDSKRCRER--DFLKKLHECLER-----------------DGKVLIPVFALGRAQEL 249
Query: 243 LEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIK 302
+ + E +LK PIY + + E+ Y W ++ + F H +
Sbjct: 250 CILLESYWERMNLKYPIYFSTGLTEKANHYYKLFISWTNQKIKNT-------FIHRNMFD 302
Query: 303 EKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLEN---- 358
K I F + ++ P IVF+ L G ++ + ++W+ D ++L++
Sbjct: 303 FKHIKAFDRSY-----IDQPGPMIVFATPGMLHAGLSLQIFKKWAEDEKNMLIMPGYCVP 357
Query: 359 --------------EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLF 404
E+D +L I + V SF + + + L+++ +PK VL
Sbjct: 358 GTIGHKVLSGTKKIEIDKKLV-----NIRLSVQYMSFSAHADAKGIMQLIQLAEPKNVLL 412
>gi|327288530|ref|XP_003228979.1| PREDICTED: integrator complex subunit 11-like [Anolis carolinensis]
Length = 600
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 68/352 (19%), Positives = 124/352 (35%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+
Sbjct: 76 ALPYFSEMVGYDGPIYMTHPTKAICPILLEDF---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKI + + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKITVDKKGET---NFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + DL++ +E ++
Sbjct: 159 LGAAMFQIKVGCESVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------SESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E++E GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHETIER-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ F E +LK PIY + E+ Y W Q+ K F +F K
Sbjct: 251 LLETFWERMNLKAPIYFSMGLTEKANHYYKLFITW-TNQKIRKTFVQRNMFEF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + + P +VF+ L G ++ + ++W+G+ +++++
Sbjct: 304 HIKAF-----DRAFADNPGPMVVFATPGMLHAGQSLQIFKKWAGNEKNMVIM 350
>gi|195112455|ref|XP_002000788.1| GI10422 [Drosophila mojavensis]
gi|193917382|gb|EDW16249.1| GI10422 [Drosophila mojavensis]
Length = 597
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/352 (18%), Positives = 128/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+++ + G++ IY+T I +++E++
Sbjct: 76 ALPYMSEIVGYTGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RK+A+ G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKVAVERKGE---SNFFTTQMIKDCMKKVIPVTLHQSMMVDTDLEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + DL++ TE ++
Sbjct: 159 LGAAMFWIKVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D + E + L + C + GG VLIP+ +G +L
Sbjct: 210 IRDS---------------KRCRERDFLKKVHECVL----KGGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ + E +LK PIY + E+ Y W ++ ++ F H + K
Sbjct: 251 LLETYWERMNLKYPIYFALGLTEKANTYYKMFITWTNQKIRKT-------FVHRNMFDFK 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F K ++ +VF+ L G ++ + ++W+ + N+++++
Sbjct: 304 HIKPF-----DKAYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNENNMVIM 350
>gi|147835406|emb|CAN74444.1| hypothetical protein VITISV_031469 [Vitis vinifera]
Length = 215
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 27/33 (81%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMM 33
MGM GLPFL+R+ GF AKIY+TE ARI +LMM
Sbjct: 161 MGMPGLPFLSRVNGFRAKIYVTEVIARIARLMM 193
>gi|414881435|tpg|DAA58566.1| TPA: putative RNA-metabolising metallo-beta-lactamase [Zea mays]
Length = 558
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 89/435 (20%), Positives = 166/435 (38%), Gaps = 70/435 (16%)
Query: 54 GPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACY 110
GP +M + L P L RK+ +G+ G E + C+ KV + +
Sbjct: 90 GPIYMTYPTKALAPFMLEDYRKVTMGQRGEEKQYS---YEDILRCMKKVTPMDLKQTVQV 146
Query: 111 NGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSD 170
+ L+I+A+ +G IGA +I G+ A + + + M D R + + + D
Sbjct: 147 DKDLVIRAYYAGHVIGAA--MIYAKVGDAAMV----YTGDYNMTPD-RHLGAAQI----D 195
Query: 171 LSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVL 230
LD I +S+++ + + E E L + C V GG VL
Sbjct: 196 RLKLDVL--ITESTYAKSIRD-----------SKPAREREFLKAVHKC----VSGGGKVL 238
Query: 231 IPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFS 290
IP +G +L + + E LK+PIY + + + Y + W ++ ++
Sbjct: 239 IPTFALGRAQELCMLLDDYWERMGLKVPIYFSAGLTIQANVYYKMLIGWTSQKIKDSHTV 298
Query: 291 GDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD 349
+P F HV H + +N PC++F+ + G ++ ++W+
Sbjct: 299 HNPFDFKHV-------------CHFERSFINNPGPCVLFATPGMITGGFSLEAFKKWAPS 345
Query: 350 HNSLLVLENE-VDAELA--VLPFKP-----------ISMKVLQCSFLSGKKLQKVQPLLK 395
+L+ L V + ++ KP + ++ Q +F + + L +
Sbjct: 346 EKNLVTLPGYCVSGTIGHKLMCGKPTRVDYEDTHIDVRCQIHQLAFSPHTDSKGIMDLTE 405
Query: 396 ILQPKLVLFPEEWRTHVSF-----SDVTSFSVSHYSENETIHIPS---LKESAELEIAAD 447
L PK V+ + ++F + NE++ IP+ LK SA
Sbjct: 406 FLSPKNVILVHGEKPQMAFLKERIESELGMPCYYPGNNESVSIPTTQNLKMSATERFITG 465
Query: 448 IASKFQWRMLKQKKL 462
A + R L ++ L
Sbjct: 466 CAVEQGKRSLHKRNL 480
>gi|195143691|ref|XP_002012831.1| GL23717 [Drosophila persimilis]
gi|194101774|gb|EDW23817.1| GL23717 [Drosophila persimilis]
Length = 597
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/352 (18%), Positives = 129/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+++ + G++ IY+T I +++E++
Sbjct: 76 ALPYMSEIVGYNGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RK+A+ G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKVAVERKGES---NFFTTQMIKDCMKKVIPVTLHQSMMVDTDLEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I+ ++ Y N + + DL++ +E ++
Sbjct: 159 LGAAMFWINVGSQSVVYTGDYNMTPDRHLGAAWIDNARPDLLI---------SESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D + E + L + C V GG VLIP+ +G +L
Sbjct: 210 IRDS---------------KRCRERDFLKKVHEC----VARGGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ + E +LK PIY + E+ Y W ++ ++ F H + K
Sbjct: 251 LLETYWERMNLKYPIYFALGLTEKANTYYKMFITWTNQKIRKT-------FVHRNMFDFK 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F K ++ +VF+ L G ++ + ++W+ + N+++++
Sbjct: 304 HIKPF-----DKAYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNENNMVIM 350
>gi|408404949|ref|YP_006862932.1| beta-lactamase [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408365545|gb|AFU59275.1| beta-lactamase domain protein [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 628
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 28/207 (13%)
Query: 210 EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEEL 269
E A + S +V AGG VL+P+ +G+ ++L + FM+ ++ + + S++E
Sbjct: 395 EAEARLASAISKTVSAGGHVLLPVPVIGISQEILLVLDRFMK--GVQARVLVEKSISEAT 452
Query: 270 LAYTNTIPEWLCKQ-RQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVF 328
Y PE+L K+ RQ L S F F V S L EP ++
Sbjct: 453 AVY-EAYPEFLSKEVRQRVLESETSQFGSQ----------FSIVESESLKNGSSEPAVIL 501
Query: 329 SPHWSLRLGPTIHLLRRWSGD-HNSLLVLENE-VDAELAVLP--FKPISMK----VLQC- 379
+P L GP++ L++ +GD HN L++L + VD ++ + +++K LQC
Sbjct: 502 APSSMLIGGPSVGYLKQIAGDPHNRLIMLSYQAVDTPGRIIQDGARQVTIKGEMINLQCQ 561
Query: 380 -----SFLSGKKLQKVQPLLKILQPKL 401
F S + +K L+PKL
Sbjct: 562 VERIDGFGSHSDYNQAMEYVKRLRPKL 588
>gi|170595519|ref|XP_001902415.1| RNA-metabolising metallo-beta-lactamase family protein [Brugia
malayi]
gi|158589929|gb|EDP28737.1| RNA-metabolising metallo-beta-lactamase family protein [Brugia
malayi]
Length = 589
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 136/330 (41%), Gaps = 60/330 (18%)
Query: 92 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 151
+K+C+ KV + E+ + L I+AF +G +GA
Sbjct: 126 IKNCMKKVIAINIHEKIDVDNELSIRAFYAGHVLGA------------------------ 161
Query: 152 AMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEK 211
AM ++ + GS+ +LY+ ++T D + + +L+ S S Y ++ + ++
Sbjct: 162 AM---FQIMVGSESVLYT--GDFNTTPDRHLGAARVEPGLKPDLLISESTYATTIRDSKR 216
Query: 212 LA---FICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEE 268
F+ D+V GG VLIP+ +G +L + + E +LK PI+ +AE+
Sbjct: 217 ARERDFLKKVH-DTVSNGGKVLIPVFALGRAQELCILLESYWERMNLKYPIFFSQGLAEK 275
Query: 269 LLAYTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIV 327
Y W ++ + + F H++ ++ I SP P ++
Sbjct: 276 ANQYYRLFISWTNEKIKRTFVERNMFDFKHIRPFEQSYI------ESPG-------PMVL 322
Query: 328 FSPHWSLRLGPTIHLLRRWSGDHNSLLVL-----ENEVDAEL--------AVLPFKPISM 374
FS L G ++ + +W D +L+++ N V A++ + I++
Sbjct: 323 FSTPGMLHGGQSLRVFTKWCSDEKNLIIMPGFCVANTVGAKVISGMKKIEIAGRVREINL 382
Query: 375 KVLQCSFLSGKKLQKVQPLLKILQPKLVLF 404
V SF + + + L++ QP+ V+F
Sbjct: 383 GVEYMSFSAHADAKGIMQLIRDCQPRNVMF 412
>gi|195503187|ref|XP_002098546.1| GE23879 [Drosophila yakuba]
gi|194184647|gb|EDW98258.1| GE23879 [Drosophila yakuba]
Length = 597
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/352 (18%), Positives = 128/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+++ + G++ IY+T I +++E++
Sbjct: 76 ALPYMSEIVGYTGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RK+A+ G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKVAVERKGE---SNFFTTQMIKDCMKKVIPVTLHQSMMVDTDLEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + DL++ +E ++
Sbjct: 159 LGAAMFWIKVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------SESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D + E + L + C V GG VLIP+ +G +L
Sbjct: 210 IRDS---------------KRCRERDFLKKVHEC----VAKGGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ + E +LK PIY + E+ Y W ++ ++ F H + K
Sbjct: 251 LLETYWERMNLKYPIYFALGLTEKANTYYKMFITWTNQKIRKT-------FVHRNMFDFK 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F K ++ +VF+ L G ++ + ++W+ + N+++++
Sbjct: 304 HIKPF-----DKAYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNENNMVIM 350
>gi|194906134|ref|XP_001981318.1| GG11690 [Drosophila erecta]
gi|190655956|gb|EDV53188.1| GG11690 [Drosophila erecta]
Length = 597
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/352 (18%), Positives = 128/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+++ + G++ IY+T I +++E++
Sbjct: 76 ALPYMSEIVGYTGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RK+A+ G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKVAVERKGE---SNFFTTQMIKDCMKKVIPVTLHQSMMVDTDLEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + DL++ +E ++
Sbjct: 159 LGAAMFWIKVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------SESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D + E + L + C V GG VLIP+ +G +L
Sbjct: 210 IRDS---------------KRCRERDFLKKVHEC----VAKGGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ + E +LK PIY + E+ Y W ++ ++ F H + K
Sbjct: 251 LLETYWERMNLKYPIYFALGLTEKANTYYKMFITWTNQKIRKT-------FVHRNMFDFK 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F K ++ +VF+ L G ++ + ++W+ + N+++++
Sbjct: 304 HIKPF-----DKAYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNENNMVIM 350
>gi|196007172|ref|XP_002113452.1| hypothetical protein TRIADDRAFT_57642 [Trichoplax adhaerens]
gi|190583856|gb|EDV23926.1| hypothetical protein TRIADDRAFT_57642 [Trichoplax adhaerens]
Length = 596
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 119/307 (38%), Gaps = 46/307 (14%)
Query: 53 SGPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEAC 109
GP +M + P L RKI + G + +KDC+ KV+ + +
Sbjct: 87 DGPIYMTHPTKAICPILLEDYRKITVDRKGEK---NFFTSQMIKDCMKKVKAINLHQTVK 143
Query: 110 YNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS 169
+ L IKA+ +G +GA +++ ++ Y N + + +L++
Sbjct: 144 VDDDLEIKAYYAGHVLGAAMFLVKVGCESVLYTGDYNMTPDRHLGAAWIDKCRPNLLI-- 201
Query: 170 DLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSV 229
TE ++ D E + L+ E VE GG V
Sbjct: 202 -------TESTYATTIRDSKRCRER--DFLTKVHECVER-----------------GGKV 235
Query: 230 LIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLF 289
LIP+ +G +L + + + +LK+PIY + + E+ Y W Q+ + F
Sbjct: 236 LIPVFALGRAQELCILLETYWDRMNLKVPIYFSTGLTEKANHYYKLFITW-TNQKIRRTF 294
Query: 290 SGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD 349
+F K I F + L++ P +VF+ L G ++ + ++W+ D
Sbjct: 295 VQHNMFEF------KHIKPF-----DRALIDNPNPMVVFATPGMLHGGLSLQIFKKWAPD 343
Query: 350 HNSLLVL 356
++++L
Sbjct: 344 DKNMVIL 350
>gi|402590428|gb|EJW84358.1| RNA-metabolising metallo-beta-lactamase [Wuchereria bancrofti]
Length = 579
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 136/330 (41%), Gaps = 60/330 (18%)
Query: 92 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 151
+K+C+ KV + E+ + L I+AF +G +GA
Sbjct: 97 IKNCMKKVIAINIHEKIDVDNELSIRAFYAGHVLGA------------------------ 132
Query: 152 AMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEK 211
AM ++ + GS+ +LY+ ++T D + + +L+ S S Y ++ + ++
Sbjct: 133 AM---FQIMVGSESVLYT--GDFNTTPDRHLGAARVEPGLKPDLLISESTYATTIRDSKR 187
Query: 212 LA---FICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEE 268
F+ D+V GG VLIP+ +G +L + + E +LK PI+ +AE+
Sbjct: 188 ARERDFLKKVH-DTVSNGGKVLIPVFALGRAQELCILLESYWERMNLKYPIFFSQGLAEK 246
Query: 269 LLAYTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIV 327
Y W ++ + + F H++ ++ I SP P ++
Sbjct: 247 ANQYYRLFISWTNEKIKRTFVERNMFDFKHIRPFEQSYI------DSPG-------PMVL 293
Query: 328 FSPHWSLRLGPTIHLLRRWSGDHNSLLVL-----ENEVDAEL--------AVLPFKPISM 374
FS L G ++ + +W D +L+++ N V A++ + I++
Sbjct: 294 FSTPGMLHGGQSLRVFTKWCSDEKNLIIMPGFCVANTVGAKVISGMKKIEIAGRMREINL 353
Query: 375 KVLQCSFLSGKKLQKVQPLLKILQPKLVLF 404
V SF + + + L++ QP+ V+F
Sbjct: 354 GVEYMSFSAHADAKGIMQLIRDCQPRNVMF 383
>gi|21358523|ref|NP_651721.1| integrator 11 [Drosophila melanogaster]
gi|7301822|gb|AAF56931.1| integrator 11 [Drosophila melanogaster]
gi|16768852|gb|AAL28645.1| LD08814p [Drosophila melanogaster]
gi|220943570|gb|ACL84328.1| CG1972-PA [synthetic construct]
gi|220953494|gb|ACL89290.1| CG1972-PA [synthetic construct]
Length = 597
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 64/352 (18%), Positives = 128/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+++ + G++ IY+T I +++E++
Sbjct: 76 ALPYMSEIVGYTGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RK+A+ G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKVAVERKGES---NFFTTQMIKDCMKKVIPVTLHQSMMVDTDLEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + DL++ +E ++
Sbjct: 159 LGAAMFWIKVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------SESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D + E + L + C V GG VLIP+ +G +L
Sbjct: 210 IRDS---------------KRCRERDFLKKVHEC----VAKGGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ + E +LK PIY + E+ Y W ++ ++ F H + K
Sbjct: 251 LLETYWERMNLKYPIYFALGLTEKANTYYKMFITWTNQKIRKT-------FVHRNMFDFK 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F K ++ +VF+ L G ++ + ++W+ + N+++++
Sbjct: 304 HIKPF-----DKAYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNENNMVIM 350
>gi|195445135|ref|XP_002070189.1| GK11920 [Drosophila willistoni]
gi|194166274|gb|EDW81175.1| GK11920 [Drosophila willistoni]
Length = 597
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 64/352 (18%), Positives = 128/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+++ + G++ IY+T I +++E++
Sbjct: 76 ALPYMSEIVGYTGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RK+A+ G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKVAVERKGE---SNFFTTQMIKDCMKKVIPVTLHQSMMVDTDLEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + DL++ +E ++
Sbjct: 159 LGAAMFWIKVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------SESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D + E + L + C V GG VLIP+ +G +L
Sbjct: 210 IRDS---------------KRCRERDFLKKVHEC----VAKGGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ + E +LK PIY + E+ Y W ++ ++ F H + K
Sbjct: 251 LLETYWERMNLKYPIYFALGLTEKANTYYKMFITWTNQKIRKT-------FVHRNMFDFK 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F K ++ +VF+ L G ++ + ++W+ + N+++++
Sbjct: 304 HIKPF-----DKAYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNENNMVIM 350
>gi|195062087|ref|XP_001996130.1| GH14325 [Drosophila grimshawi]
gi|193891922|gb|EDV90788.1| GH14325 [Drosophila grimshawi]
Length = 597
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 64/352 (18%), Positives = 128/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+++ + G++ IY+T I +++E++
Sbjct: 76 ALPYMSEIVGYAGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RK+A+ G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKVAVERKGES---NFFTTQMIKDCMKKVIPVTLHQSMMVDTDLEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + DL++ +E ++
Sbjct: 159 LGAAMFWIKVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------SESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D + E + L + C V GG VLIP+ +G +L
Sbjct: 210 IRDS---------------KRCRERDFLKKVHEC----VAKGGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ + E +LK PIY + E+ Y W ++ ++ F H + K
Sbjct: 251 LLETYWERMNLKYPIYFALGLTEKANTYYKMFITWTNQKIRKT-------FVHRNMFDFK 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F K ++ +VF+ L G ++ + ++W+ + N+++++
Sbjct: 304 HIKPF-----DKAYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNENNMVIM 350
>gi|356530858|ref|XP_003533996.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
2-like isoform 2 [Glycine max]
Length = 742
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 70/365 (19%), Positives = 138/365 (37%), Gaps = 92/365 (25%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + G SA +Y TE R+G L M Y Q+ ++ S E +
Sbjct: 70 ALPYAMKRLGLSAPVYSTEPVYRLGLLTM---------YDQYLSRKQVS--------EFD 112
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGI---LIIKAFSS 121
L + + V L + + ++G ++I +
Sbjct: 113 LF---------------------TLDDIDSAFQSVTRLTYSQNHHFSGKGEGIVIAPHVA 151
Query: 122 GLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRA---IQGSDLILYSDLSSLDSTE 178
G +G W I+ ++ Y A+DF++R + G+ L
Sbjct: 152 GHLLGGTIWKITKDGEDVIY----------AVDFNHRKERHLNGTVL------------- 188
Query: 179 DIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGV 238
SF + N+L+N + ++ + +++AGG+VL+P++ VG
Sbjct: 189 ----GSFVRPAVLITDAYNALNNQPYRRQNDKEFGGNHLFNLKTLRAGGNVLLPVDTVGR 244
Query: 239 FLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLC-------KQRQEKLFSG 291
L+L+ + ++ +L PIY ++ VA + Y + EW+ ++ +E +F
Sbjct: 245 VLELILMLELYWADENLNYPIYFLTYVASSTIDYVKSFLEWMSDTIAKSFEKTRENIF-- 302
Query: 292 DPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHN 351
L +V L+ ++ +L P +V + SL G + + W+ D
Sbjct: 303 --LLKYVTLL----------INKTELDNAPDGPKVVLASMASLEAGFSHDIFVEWANDVK 350
Query: 352 SLLVL 356
+L++
Sbjct: 351 NLVLF 355
>gi|388507878|gb|AFK42005.1| unknown [Medicago truncatula]
Length = 534
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 149/408 (36%), Gaps = 66/408 (16%)
Query: 53 SGPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEAC 109
SGP +M + L P L RK+ + G E H+ +C+ KV + +
Sbjct: 86 SGPVYMTYPIKALSPLMLEDYRKVMVDRRGEEEQFTSD---HIAECMKKVIAVDLKQTVQ 142
Query: 110 YNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS 169
+ L I+A+ +G IGA + + + Y N D A Q L L
Sbjct: 143 VDEDLQIRAYYAGHVIGAAMFYVKVGDAEMVYTGDYNMTP----DRHLGAAQIDRLRL-- 196
Query: 170 DLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSV 229
L TE ++ D S Y E E L + C V GG V
Sbjct: 197 ---DLLITESTYATTIRD------------SKY---AREREFLKAVHKC----VSGGGKV 234
Query: 230 LIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLF 289
LIP +G +L + + E +LK+PIY S + + Y + W Q+ + +
Sbjct: 235 LIPTFALGRAQELRILLDDYWERMNLKVPIYFSSGLTIQANTYHKMLIGW-TSQKIKDTY 293
Query: 290 SGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD 349
S F K +H F + +++ PC++F+ L G ++ + + W+
Sbjct: 294 STHNAFDF------KNVHKF-----ERSMLDAPGPCVLFATPGMLIGGFSLEVFKHWAPS 342
Query: 350 HNSLLVLENEVDAELA---VLPFKP------------ISMKVLQCSFLSGKKLQKVQPLL 394
+L+ L A + KP + ++ Q +F + + + L+
Sbjct: 343 EKNLVALPGYCMAGTVGHRLTSGKPTKVDTDPDTQIDVRCQIHQLAFSAHTDSKGIMDLV 402
Query: 395 KILQPKLVLF-----PEEWRTHVSFSDVTSFSVSHYSENETIHIPSLK 437
K L PK V+ P+ SH + NE + I S +
Sbjct: 403 KFLSPKHVMLVHGDKPKMVSLKERIDSELGIPCSHPANNEIVTISSTQ 450
>gi|357158307|ref|XP_003578085.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Brachypodium distachyon]
Length = 553
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 90/454 (19%), Positives = 159/454 (35%), Gaps = 99/454 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ T + G+ IY+T + LM+E+ YR+ + Q+ +E++
Sbjct: 79 ALPYFTEVCGYHGPIYMTYPTKALAPLMLED-------YRKVMVDQRGEEEQY-SYEDI- 129
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
LR C+ KV + + N L+I+A+ +G
Sbjct: 130 -----LR-----------------------CMKKVIPVDLKQTIQVNRDLVIRAYYAGHV 161
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + Y N D A Q L L L TE +
Sbjct: 162 LGAAMVYAKVGDAAMVYTGDYNMTP----DRHLGAAQIERLKL-----DLLITESTYAKT 212
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D + E E L + C V GG VLIP +G +L
Sbjct: 213 IRDSKH---------------AREREFLKAVHKC----VSEGGKVLIPTFALGRAQELCI 253
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKE 303
+ + E +LKIPIY + + + Y + W ++ ++ +P F HV
Sbjct: 254 LLDDYWERMNLKIPIYFSAGLTIQANMYYKMLIGWTSQKIKDSYTVQNPFDFKHV----- 308
Query: 304 KKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAE 363
H + +N PC++F+ + G ++ + +RW+ +L+ L A
Sbjct: 309 --------CHFERSFINDPGPCVLFATPGMISGGFSLEVFKRWATSDKNLVTLPGYCVAG 360
Query: 364 L---AVLPFKP------------ISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 408
++ KP + ++ Q SF + + L + L P V+
Sbjct: 361 TIGHKLMSGKPTRIDIDKDTHVDVRCQIHQLSFSPHTDSKGIMDLTEFLSPNHVILVHGE 420
Query: 409 RTHVSF-----SDVTSFSVSHYSENETIHIPSLK 437
+ ++F S + + NET+ IP+ +
Sbjct: 421 KPQMAFLKDRIESELGMSCYYPANNETVSIPTTQ 454
>gi|312083284|ref|XP_003143797.1| RNA-metabolising metallo-beta-lactamase [Loa loa]
gi|307761039|gb|EFO20273.1| RNA-metabolising metallo-beta-lactamase [Loa loa]
Length = 644
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 135/330 (40%), Gaps = 60/330 (18%)
Query: 92 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 151
+K+C+ KV + E+ + L I+AF +G +GA
Sbjct: 181 IKNCMKKVIAINIHEKIDIDNELSIRAFYAGHVLGA------------------------ 216
Query: 152 AMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEK 211
AM ++ + GS+ +LY+ ++T D + + +L+ S S Y ++ + ++
Sbjct: 217 AM---FQIMVGSESVLYT--GDFNTTPDRHLGAARVEPGLKPDLLISESTYATTIRDSKR 271
Query: 212 LA---FICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEE 268
F+ D+V GG VLIP+ +G +L + + E +LK PI+ +AE+
Sbjct: 272 ARERDFLKKVH-DTVSNGGKVLIPVFALGRAQELCILLESYWERMNLKYPIFFSQGLAEK 330
Query: 269 LLAYTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIV 327
Y W ++ + + F H++ ++ SP P ++
Sbjct: 331 ANQYYRLFISWTNEKIKRTFVERNMFDFKHIRPFEQS------YTDSPG-------PMVL 377
Query: 328 FSPHWSLRLGPTIHLLRRWSGDHNSLLVL-----ENEVDAEL--------AVLPFKPISM 374
FS L G ++ + +W D +L+++ N V A++ + I++
Sbjct: 378 FSTPGMLHGGQSLRVFTKWCSDEKNLIIMPGFCVANTVGAKVISGMKKIEIAGRMREINL 437
Query: 375 KVLQCSFLSGKKLQKVQPLLKILQPKLVLF 404
V SF + + + L++ QPK V+F
Sbjct: 438 GVEYMSFSAHADAKGIMQLIRDCQPKNVMF 467
>gi|91086147|ref|XP_969343.1| PREDICTED: similar to CG1972 CG1972-PA [Tribolium castaneum]
gi|270009886|gb|EFA06334.1| hypothetical protein TcasGA2_TC009205 [Tribolium castaneum]
Length = 595
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 67/355 (18%), Positives = 132/355 (37%), Gaps = 83/355 (23%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+++ M G+S IY+T I +++E++
Sbjct: 76 ALPYMSEMVGYSGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RK+++ + G + +KDC+ KV + + + + IKA+ +G
Sbjct: 108 ------RKVSVEKKGDQ---NFFTSQMIKDCMKKVIAVTLHQSLMVDNEIEIKAYYAGHV 158
Query: 125 IGACN-WIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQS 183
+GA WI GA+ ++ Y N + + DL++ +E +
Sbjct: 159 LGAAMFWIRVGAQ-SVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------SESTYAT 208
Query: 184 SFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLL 243
+ D + E + L + C + GG VLIP+ +G +L
Sbjct: 209 TIRDS---------------KRCRERDFLKKVHEC----MDRGGKVLIPVFALGRAQELC 249
Query: 244 EQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL--FAHVKLI 301
+ + E +LK P+Y + E+ Y W Q+ K F + F H+K
Sbjct: 250 ILLETYWERMNLKAPVYFALGLTEKANNYYKMFITW-TNQKIRKTFVQRNMFDFKHIKPF 308
Query: 302 KEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I + P +VF+ L G ++ + ++W+ + N+++++
Sbjct: 309 DRSYI-------------DNPGPMVVFATPGMLHAGLSLQIFKKWAPNENNMVIM 350
>gi|414881434|tpg|DAA58565.1| TPA: putative RNA-metabolising metallo-beta-lactamase [Zea mays]
Length = 400
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 122/307 (39%), Gaps = 48/307 (15%)
Query: 54 GPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACY 110
GP +M + L P L RK+ +G+ G E + C+ KV + +
Sbjct: 90 GPIYMTYPTKALAPFMLEDYRKVTMGQRGEEKQYS---YEDILRCMKKVTPMDLKQTVQV 146
Query: 111 NGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSD 170
+ L+I+A+ +G IGA +I G+ A + + + M D R + + + D
Sbjct: 147 DKDLVIRAYYAGHVIGAA--MIYAKVGDAAMV----YTGDYNMTPD-RHLGAAQI----D 195
Query: 171 LSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVL 230
LD I +S+++ + + E E L + C V GG VL
Sbjct: 196 RLKLDVL--ITESTYAKSIRD-----------SKPAREREFLKAVHKC----VSGGGKVL 238
Query: 231 IPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFS 290
IP +G +L + + E LK+PIY + + + Y + W ++ ++
Sbjct: 239 IPTFALGRAQELCMLLDDYWERMGLKVPIYFSAGLTIQANVYYKMLIGWTSQKIKDSHTV 298
Query: 291 GDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD 349
+P F HV H + +N PC++F+ + G ++ ++W+
Sbjct: 299 HNPFDFKHV-------------CHFERSFINNPGPCVLFATPGMITGGFSLEAFKKWAPS 345
Query: 350 HNSLLVL 356
+L+ L
Sbjct: 346 EKNLVTL 352
>gi|346472285|gb|AEO35987.1| hypothetical protein [Amblyomma maculatum]
Length = 510
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 65/354 (18%), Positives = 128/354 (36%), Gaps = 81/354 (22%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP++T M G+S IY+T I +++E+ YR+ + E
Sbjct: 47 ALPYMTEMVGYSGPIYMTHPTKAICPILLED-------YRKITVDRKG---------ETN 90
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
SA+ ++DC+ KV + + + L IKA+ +G
Sbjct: 91 FFTSAM---------------------IRDCMRKVVAVNLHQAVQVDDELEIKAYYAGHV 129
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + DL++ TE ++
Sbjct: 130 LGAAMFWIRVGSQSVVYTGDYNMTPDRHLGAAWVDKCRPDLLI---------TESTYATT 180
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D + E + L + C + GG VLIP+ +G +L
Sbjct: 181 IRDS---------------KRCRERDFLTKVHDC----IDKGGKVLIPVFALGRAQELCI 221
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL--FAHVKLIK 302
+ + + +L++PIY + E+ Y W Q+ K F + F H+K
Sbjct: 222 LLETYWDRMNLRVPIYFAVGLTEKATNYYKMFITW-TNQKIRKTFVQRNMFDFKHIKPFD 280
Query: 303 EKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
+ ++ P +VF+ L G ++ + ++W+ +++++
Sbjct: 281 -------------RAFIDNPGPMVVFATPGMLHAGLSLQIFKKWAPFEANMVIM 321
>gi|125773833|ref|XP_001358175.1| GA15164 [Drosophila pseudoobscura pseudoobscura]
gi|54637910|gb|EAL27312.1| GA15164 [Drosophila pseudoobscura pseudoobscura]
Length = 597
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 64/352 (18%), Positives = 128/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+++ + G++ IY+T I +++E++
Sbjct: 76 ALPYMSEIVGYNGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RK+A+ G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKVAVERKGES---NFFTTQMIKDCMKKVIPVTLHQSMMVDTDLEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + DL++ +E ++
Sbjct: 159 LGAAMFWIKVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------SESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D + E + L + C V GG VLIP+ +G +L
Sbjct: 210 IRDS---------------KRCRERDFLKKVHEC----VARGGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ + E +LK PIY + E+ Y W ++ ++ F H + K
Sbjct: 251 LLETYWERMNLKYPIYFALGLTEKANTYYKMFITWTNQKIRKT-------FVHRNMFDFK 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F K ++ +VF+ L G ++ + ++W+ + N+++++
Sbjct: 304 HIKPF-----DKAYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNENNMVIM 350
>gi|312621851|ref|YP_004023464.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202318|gb|ADQ45645.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor
kronotskyensis 2002]
Length = 821
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 132/312 (42%), Gaps = 65/312 (20%)
Query: 65 LLPSALRKIALGEDGSELGGGCPCIA--HVKDCISKVQTLRFGEEACYNGILIIKA--FS 120
LL +LR + + ED P A +V+D + + TL +G + I IK F
Sbjct: 92 LLYDSLRIMEIAEDE------IPIYAEKNVEDLLDR--TLTYGFNYTFEPIEGIKVTFFP 143
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQG--SDLILYSDLSSLDSTE 178
+G +GA I +G+I Y +F++ + D ++ D++
Sbjct: 144 AGHILGASMIFIQTQEGSILYTG--DFSADRQLTVDKASVPKIRPDVV------------ 189
Query: 179 DIDQSSFSD---DNNNWEE--LMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPI 233
I +S++ D N N+EE L N+++ + + GG VLIP
Sbjct: 190 -ICESTYGDRLHTNRNFEEERLFNTVA--------------------EVISQGGKVLIPA 228
Query: 234 NRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDP 293
+G +++ + FM+ + ++I V E + Y N P +L + +++ G+
Sbjct: 229 FAIGRAQEIILILRNFMKKRKVSFNVFIDGMVREVIRVYRNN-PTYLSSRYYKRVLKGEE 287
Query: 294 LF--AHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHN 351
+F ++ +I +KK + +++ +PC++ S L GP++ + + N
Sbjct: 288 IFLADNINVISDKK--------QREEIISSSDPCVIISSSGMLTGGPSVFYAEKIVQNQN 339
Query: 352 SLLVLENEVDAE 363
+L+ + D E
Sbjct: 340 ALIAITGYQDEE 351
>gi|307215032|gb|EFN89859.1| Integrator complex subunit 11 [Harpegnathos saltator]
Length = 594
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/354 (18%), Positives = 131/354 (37%), Gaps = 81/354 (22%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ T M G++ IY+T I +++E++
Sbjct: 75 ALPYFTEMVGYTGPIYMTHPTKAIAPILLEDM---------------------------- 106
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RK+A+ G +KDCI KV + + + L IKA+ +G
Sbjct: 107 ------RKVAVERKGES---NFFTSQMIKDCIKKVIAVTLHQSVMVDPDLEIKAYYAGHV 157
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + + +I Y N + + DL+ I +S+
Sbjct: 158 LGAAMFWVRVGSQSIVYTGDYNMTPDRHLGAAWIDKCRPDLL-------------ISEST 204
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
++ + + E + L + C + GG VLIP+ +G +L
Sbjct: 205 YATTIRD-----------SKRCRERDFLKKVHEC----IDRGGKVLIPVFALGRAQELCI 249
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL--FAHVKLIK 302
+ + E +LK+P+Y + E+ Y W Q+ +K F + F H+K
Sbjct: 250 LLETYWERMNLKVPVYFALGLTEKANNYYKMFITW-TNQKIKKTFVQRNMFDFKHIKPFD 308
Query: 303 EKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
+ I +P + +VF+ L G ++ + ++W+ + ++++++
Sbjct: 309 KAYI------DNPGAM-------VVFATPGMLHAGLSLQIFKKWAPNESNMVIM 349
>gi|195341281|ref|XP_002037239.1| GM12816 [Drosophila sechellia]
gi|195574829|ref|XP_002105386.1| GD21460 [Drosophila simulans]
gi|194131355|gb|EDW53398.1| GM12816 [Drosophila sechellia]
gi|194201313|gb|EDX14889.1| GD21460 [Drosophila simulans]
Length = 597
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/352 (18%), Positives = 128/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+++ + G++ IY+T I +++E++
Sbjct: 76 ALPYMSEIVGYTGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RK+A+ G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKVAVERKGE---SNFFTTQMIKDCMKKVIPVTLHQSMMVDTDLEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + DL++ +E ++
Sbjct: 159 LGAAMFWIKVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------SESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D + E + L + C V GG VLIP+ +G +L
Sbjct: 210 IRDS---------------KRCRERDFLKKVHEC----VAKGGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ + E +LK PIY + E+ Y W ++ ++ F H + K
Sbjct: 251 LLETYWERMNLKYPIYFALGLTEKANTYYKMFITWTNQKIRKT-------FVHRNMFDFK 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F K ++ +VF+ L G ++ + ++W+ + N+++++
Sbjct: 304 HIKPF-----DKNYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNENNMVIM 350
>gi|356530856|ref|XP_003533995.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
2-like isoform 1 [Glycine max]
Length = 736
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/365 (19%), Positives = 138/365 (37%), Gaps = 95/365 (26%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + G SA +Y TE R+G L M Y Q+ ++ S E +
Sbjct: 70 ALPYAMKRLGLSAPVYSTEPVYRLGLLTM---------YDQYLSRKQVS--------EFD 112
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGI---LIIKAFSS 121
L + + V L + + ++G ++I +
Sbjct: 113 LF---------------------TLDDIDSAFQSVTRLTYSQNHHFSGKGEGIVIAPHVA 151
Query: 122 GLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRA---IQGSDLILYSDLSSLDSTE 178
G +G W I+ ++ Y A+DF++R + G+ L
Sbjct: 152 GHLLGGTIWKITKDGEDVIY----------AVDFNHRKERHLNGTVL------------- 188
Query: 179 DIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGV 238
SF + N+L+N + ++ I +++AGG+VL+P++ VG
Sbjct: 189 ----GSFVRPAVLITDAYNALNNQPYRRQNDKEFGDILK---KTLRAGGNVLLPVDTVGR 241
Query: 239 FLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLC-------KQRQEKLFSG 291
L+L+ + ++ +L PIY ++ VA + Y + EW+ ++ +E +F
Sbjct: 242 VLELILMLELYWADENLNYPIYFLTYVASSTIDYVKSFLEWMSDTIAKSFEKTRENIF-- 299
Query: 292 DPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHN 351
L +V L+ ++ +L P +V + SL G + + W+ D
Sbjct: 300 --LLKYVTLL----------INKTELDNAPDGPKVVLASMASLEAGFSHDIFVEWANDVK 347
Query: 352 SLLVL 356
+L++
Sbjct: 348 NLVLF 352
>gi|168034228|ref|XP_001769615.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679157|gb|EDQ65608.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 563
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/353 (18%), Positives = 130/353 (36%), Gaps = 79/353 (22%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ T + G+ IY+T + LM+E+ YR+ E G Q E+
Sbjct: 69 ALPYFTEVCGYDGPIYMTYPTKALAPLMLED-------YRKV--MVERKGEQ----EQFS 115
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
+L ++ C+ KV + + L +A+ +G
Sbjct: 116 VL------------------------QIQKCMKKVTAVDLRQTIKVGADLEFRAYYAGHV 151
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + + + Y N + + + L+ I +S+
Sbjct: 152 LGAAMFWVKAGDDTVVYTGDYNMTPDRHLG-------------AAQIDRLEPDLLITEST 198
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
++ + + E E L + C V AGG VLIP+ +G +L
Sbjct: 199 YATTVRD-----------SKRAREREFLKAVHKC----VAAGGKVLIPVFALGRAQELCI 243
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKE 303
+ + E ++L +PIYI + + + Y + W ++ ++ + + F HV +
Sbjct: 244 LLDEYWERTNLDMPIYISAGLTMQANVYYKLLISWTNQKVKDTYVTRNTFDFKHVIPFER 303
Query: 304 KKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
KI + PC++F+ L G ++ + + W+ +++++L
Sbjct: 304 SKI-------------DAPGPCVLFATPGMLSGGLSLEVFKHWAPSESNMIIL 343
>gi|357624104|gb|EHJ75000.1| hypothetical protein KGM_18742 [Danaus plexippus]
Length = 595
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/354 (19%), Positives = 128/354 (36%), Gaps = 81/354 (22%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+++ M G++ IY+T I +++E++
Sbjct: 76 ALPYMSEMVGYTGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RK+A+ G +KDCI KV + + + L IKA+ +G
Sbjct: 108 ------RKVAVERKGE---SNFFTSQMIKDCIKKVTAVTLHQSVMVDNELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + DL++ +E ++
Sbjct: 159 LGAAMFWIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------SESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E VE+ GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLKKVHECVEK-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL--FAHVKLIK 302
+ + E +LK P+Y + E+ Y W Q+ K F + F H+K
Sbjct: 251 LLETYWERMNLKYPVYFALGLTEKANNYYKMFITW-TNQKIRKTFVQRNMFDFKHIKPFD 309
Query: 303 EKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
+ I +P + +VF+ L G ++++ ++W+ ++L++
Sbjct: 310 KSYI------DNPGAM-------VVFATPGMLHAGLSLNIFKKWAPYEQNMLIM 350
>gi|414881433|tpg|DAA58564.1| TPA: putative RNA-metabolising metallo-beta-lactamase [Zea mays]
Length = 400
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 122/307 (39%), Gaps = 48/307 (15%)
Query: 54 GPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACY 110
GP +M + L P L RK+ +G+ G E + C+ KV + +
Sbjct: 90 GPIYMTYPTKALAPFMLEDYRKVTMGQRGEEKQYS---YEDILRCMKKVTPMDLKQTVQV 146
Query: 111 NGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSD 170
+ L+I+A+ +G IGA +I G+ A + + + M D R + + + D
Sbjct: 147 DKDLVIRAYYAGHVIGAA--MIYAKVGDAAMV----YTGDYNMTPD-RHLGAAQI----D 195
Query: 171 LSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVL 230
LD I +S+++ + + E E L + C V GG VL
Sbjct: 196 RLKLDVL--ITESTYAKSIRD-----------SKPAREREFLKAVHKC----VSGGGKVL 238
Query: 231 IPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFS 290
IP +G +L + + E LK+PIY + + + Y + W ++ ++
Sbjct: 239 IPTFALGRAQELCMLLDDYWERMGLKVPIYFSAGLTIQANVYYKMLIGWTSQKIKDSHTV 298
Query: 291 GDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD 349
+P F HV H + +N PC++F+ + G ++ ++W+
Sbjct: 299 HNPFDFKHV-------------CHFERSFINNPGPCVLFATPGMITGGFSLEAFKKWAPS 345
Query: 350 HNSLLVL 356
+L+ L
Sbjct: 346 EKNLVTL 352
>gi|395840793|ref|XP_003793236.1| PREDICTED: integrator complex subunit 11 isoform 2 [Otolemur
garnettii]
Length = 499
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 280
++V+ GG VLIP+ +G +L + F E +LK+PIY + + E+ Y W
Sbjct: 126 ETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFITW- 184
Query: 281 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 340
Q+ K F +F K I F + + P +VF+ L G ++
Sbjct: 185 TNQKIRKTFVQRNMFEF------KHIKAF-----DRAFADNPGPMVVFATPGMLHAGQSL 233
Query: 341 HLLRRWSGDHNSLLVL 356
+ R+W+G+ +++++
Sbjct: 234 QIFRKWAGNEKNMVIM 249
>gi|384486005|gb|EIE78185.1| hypothetical protein RO3G_02889 [Rhizopus delemar RA 99-880]
Length = 613
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/354 (18%), Positives = 129/354 (36%), Gaps = 81/354 (22%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LPF T M G+ IY+T I +++E+ YR+ E G E
Sbjct: 53 ALPFFTEMLGYDGPIYMTHPTKAICPILLED-------YRKI--TVERKG-------ETN 96
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
SA+ +K+C+ KV + + + L IKA+ +G
Sbjct: 97 FFTSAM---------------------IKNCMKKVHAVSLHQTIKVDDELEIKAYYAGHV 135
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + + + ++ Y N + + D+++ TE ++
Sbjct: 136 LGAAMFYVRVGQESVVYTGDYNMTPDRHLGSAWIDKVRPDVLV---------TESTYATT 186
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D + E + L + C ++ GG+V+IP+ +G +L
Sbjct: 187 IRDSKRS---------------RERDFLTKVHECVLN----GGNVIIPVFALGRAQELCI 227
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL--FAHVKLIK 302
I + + L +PIY + + E + W Q+ + FS + F H+K
Sbjct: 228 LIESYWDRMGLDVPIYFSTGLTERATEFYKLFINW-TNQKIKSTFSQRNMFDFKHIKTWN 286
Query: 303 EKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I + P ++F+ L G ++ + ++W+ D +++++
Sbjct: 287 RNYI-------------DQPGPKVLFATPGMLNAGTSLEVFKKWAPDPKNMVIM 327
>gi|10433243|dbj|BAB13943.1| unnamed protein product [Homo sapiens]
Length = 499
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 108/260 (41%), Gaps = 35/260 (13%)
Query: 116 IKAFSSGLDIGACNWIISGAKGNIAYISGSN---------------FASGHAMDFDYRAI 160
+ +G D+G ++S A N+ G + + +GH + I
Sbjct: 6 VTPLGAGQDVGRSCILVSIAGKNVMLDCGMHMGFNDDVDDELEIKAYYAGHVLGAAMFQI 65
Query: 161 Q-GSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLA---FIC 216
+ GS+ ++Y+ ++ + + N L+ + S Y ++ + ++ F+
Sbjct: 66 KVGSESVVYTGDYNMTPDRHLGAAWIDKCRPN---LLITESTYATTIRDSKRCRERDFLK 122
Query: 217 SCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTI 276
++V+ GG VLIP+ +G +L + F E +LK+PIY + + E+ Y
Sbjct: 123 KVH-ETVERGGKVLIPVFALGRAQELCILLKTFWERMNLKVPIYFSTGLTEKANHYYKLF 181
Query: 277 PEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRL 336
W Q+ K F +F K I F + + P +VF+ L
Sbjct: 182 IPW-TNQKIRKTFVQRNMFEF------KHIKAF-----DRAFADNPGPMVVFATPGMLHA 229
Query: 337 GPTIHLLRRWSGDHNSLLVL 356
G ++ + R+W+G+ +++++
Sbjct: 230 GQSLQIFRKWAGNEKNMVIM 249
>gi|328776642|ref|XP_003249190.1| PREDICTED: integrator complex subunit 11-like [Apis mellifera]
Length = 603
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/354 (18%), Positives = 130/354 (36%), Gaps = 81/354 (22%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ T M G++ IY+T I +++E++
Sbjct: 76 ALPYFTEMVGYTGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RK+A+ G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKVAVERKGES---NFFTSQMIKDCMKKVIAVTLHQSVMVDSELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I +I Y N + + DL+ I +S+
Sbjct: 159 LGAAMFWIRVGSQSIVYTGDYNMTPDRHLGAAWIDKCRPDLL-------------ISEST 205
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
++ + + E + L + C + GG VLIP+ +G +L
Sbjct: 206 YATTIRD-----------SKRCRERDFLKKVHEC----IDRGGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL--FAHVKLIK 302
+ + E +LK+P+Y + E+ Y W Q+ +K F + F H+K
Sbjct: 251 LLETYWERMNLKVPVYFALGLTEKANNYYKMFITW-TNQKIKKTFVQRNMFDFKHIKPFD 309
Query: 303 EKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
+ I +P + +VF+ L G ++ + ++W+ + +++++
Sbjct: 310 KAYI------DNPGAM-------VVFATPGMLHAGLSLQIFKKWAPNEANMVIM 350
>gi|255570075|ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
gi|223534732|gb|EEF36424.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
Length = 963
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 139/370 (37%), Gaps = 61/370 (16%)
Query: 53 SGPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEAC 109
+GP +M + L P L RK+ + G E H+K C++KV + +
Sbjct: 86 NGPVYMTYPTKALSPLMLEDYRKVMVDRRGEEEQFTAD---HIKQCLNKVIAVDLKQTVQ 142
Query: 110 YNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS 169
+ L I+A+ +G +GA + + Y N D A Q L L
Sbjct: 143 VDKDLQIRAYYAGHVLGAAMFYAKVGDSAMVYTGDYNMTP----DRHLGAAQIDRLQL-- 196
Query: 170 DLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSV 229
L TE ++ D S Y E E L + C V GG V
Sbjct: 197 ---DLLITESTYATTIRD------------SKY---AREREFLKVVHKC----VAGGGKV 234
Query: 230 LIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLF 289
LIP +G +L + + E +LK+PIY + + + Y + W ++ +E
Sbjct: 235 LIPTFALGRAQELCLLLDDYWERMNLKVPIYFSAGLTIQANMYYKMLIGWTSQKIKETYT 294
Query: 290 SGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD 349
S + K ++ F + L++ PC++F+ + G ++ + +RW+
Sbjct: 295 SRNAF-------DFKNVYTF-----DRSLLDAPGPCVLFATPGMISGGFSLEVFKRWAPC 342
Query: 350 HNSLLVLENEVDAEL---AVLPFKP------------ISMKVLQCSFLSGKKLQKVQPLL 394
+L+ L A ++ KP + ++ Q SF + + L+
Sbjct: 343 EMNLVTLPGYCVAGTIGHKLMSGKPSKINLDKDTQIDVRCQIHQLSFSPHTDAKGIMDLV 402
Query: 395 KILQPKLVLF 404
K L PK V+
Sbjct: 403 KFLSPKHVIL 412
>gi|194765324|ref|XP_001964777.1| GF23370 [Drosophila ananassae]
gi|190615049|gb|EDV30573.1| GF23370 [Drosophila ananassae]
Length = 597
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/352 (17%), Positives = 128/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+++ + G++ IY+T I +++E++
Sbjct: 76 ALPYMSEIVGYTGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RK+A+ G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKVAVERKGE---SNFFTTQMIKDCMKKVIPVTLHQSMMVDTDLEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + DL++ +E ++
Sbjct: 159 LGAAMFWIKVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------SESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D + E + L + C V GG VLIP+ +G +L
Sbjct: 210 IRDS---------------KRCRERDFLKKVHEC----VAKGGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ + + +LK PIY + E+ Y W ++ ++ F H + K
Sbjct: 251 LLETYWDRMNLKYPIYFALGLTEKANTYYKMFITWTNQKIRKT-------FVHRNMFDFK 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F K ++ +VF+ L G ++ + ++W+ + N+++++
Sbjct: 304 HIKPF-----DKAYIDNPGAMVVFATPGMLHAGLSLQIFKKWAPNENNMVIM 350
>gi|383859336|ref|XP_003705151.1| PREDICTED: integrator complex subunit 11-like isoform 1 [Megachile
rotundata]
Length = 595
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/354 (18%), Positives = 130/354 (36%), Gaps = 81/354 (22%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ T M G++ IY+T I +++E++
Sbjct: 76 ALPYFTEMVGYTGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RK+A+ G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKVAVERKGES---NFFTSQMIKDCMKKVIAVTLHQSVMVDSELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I +I Y N + + DL+ I +S+
Sbjct: 159 LGAAMFWIRVGSQSIVYTGDYNMTPDRHLGAAWIDKCRPDLL-------------ISEST 205
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
++ + + E + L + C + GG VLIP+ +G +L
Sbjct: 206 YATTIRD-----------SKRCRERDFLKKVHEC----IDRGGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL--FAHVKLIK 302
+ + E +LK+P+Y + E+ Y W Q+ +K F + F H+K
Sbjct: 251 LLETYWERMNLKVPVYFALGLTEKANNYYKMFITW-TNQKIKKTFVQRNMFDFKHIKPFD 309
Query: 303 EKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
+ I +P + +VF+ L G ++ + ++W+ + +++++
Sbjct: 310 KAYI------DNPGAM-------VVFATPGMLHAGLSLQIFKKWAPNEANMVIM 350
>gi|303391170|ref|XP_003073815.1| putative beta-lactamase fold-containing exonuclease
[Encephalitozoon intestinalis ATCC 50506]
gi|303302963|gb|ADM12455.1| putative beta-lactamase fold-containing exonuclease
[Encephalitozoon intestinalis ATCC 50506]
Length = 496
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 119/309 (38%), Gaps = 52/309 (16%)
Query: 53 SGPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEAC 109
SGP +M E+ P L RKI G+ S + +C+ KV T+ E
Sbjct: 84 SGPIYMTLPTKEVCPVLLDDFRKIVGGKGDSIFS-----YQDISNCMKKVVTISMNETYK 138
Query: 110 YNGILIIKAFSSGLDIGACNWIISGAKGNIAYISG-SNFASGHAMDFDYRAIQGSDLILY 168
++ I + +G +GA + +S ++ Y S H + I+ LI
Sbjct: 139 HDENFYITPYYAGHVLGAAMFHVSVGDQSVVYTGDYSTTPDKHLGPASIKCIRPDLLITE 198
Query: 169 SDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGS 228
S S+ T D + V+E E L + C + GG
Sbjct: 199 STYGSI--TRDCRR-----------------------VKEREFLKAVSDC----IARGGR 229
Query: 229 VLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKL 288
VLIPI +G +L + + E + L+IP+Y S + E+ + + + K+
Sbjct: 230 VLIPIFALGRAQELCLLLDGYWERTGLEIPVYFSSGLTEKANEIYKKFIGYTNETVKRKI 289
Query: 289 FSGDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWS 347
F + + H+K + + M+ + P ++F+ L G ++ + + W
Sbjct: 290 FERNVFEYKHIKPFQ-------------RYYMDNKGPMVLFASPGMLHSGMSLRIFKEWC 336
Query: 348 GDHNSLLVL 356
D +L+++
Sbjct: 337 EDEKNLVII 345
>gi|380011463|ref|XP_003689822.1| PREDICTED: integrator complex subunit 11-like [Apis florea]
Length = 595
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/354 (18%), Positives = 130/354 (36%), Gaps = 81/354 (22%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ T M G++ IY+T I +++E++
Sbjct: 76 ALPYFTEMVGYTGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RK+A+ G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKVAVERKGES---NFFTSQMIKDCMKKVIAVTLHQSVMVDSELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I +I Y N + + DL+ I +S+
Sbjct: 159 LGAAMFWIRVGSQSIVYTGDYNMTPDRHLGAAWIDKCRPDLL-------------ISEST 205
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
++ + + E + L + C + GG VLIP+ +G +L
Sbjct: 206 YATTIRD-----------SKRCRERDFLKKVHEC----IDRGGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL--FAHVKLIK 302
+ + E +LK+P+Y + E+ Y W Q+ +K F + F H+K
Sbjct: 251 LLETYWERMNLKVPVYFALGLTEKANNYYKMFITW-TNQKIKKTFVQRNMFDFKHIKPFD 309
Query: 303 EKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
+ I +P + +VF+ L G ++ + ++W+ + +++++
Sbjct: 310 KAYI------DNPGAM-------VVFATPGMLHAGLSLQIFKKWAPNEANMVIM 350
>gi|340728535|ref|XP_003402577.1| PREDICTED: integrator complex subunit 11-like [Bombus terrestris]
gi|350421011|ref|XP_003492700.1| PREDICTED: integrator complex subunit 11-like [Bombus impatiens]
Length = 595
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/354 (18%), Positives = 130/354 (36%), Gaps = 81/354 (22%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ T M G++ IY+T I +++E++
Sbjct: 76 ALPYFTEMVGYTGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RK+A+ G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKVAVERKGES---NFFTSQMIKDCMKKVIAVTLHQSVMVDSELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I +I Y N + + DL+ I +S+
Sbjct: 159 LGAAMFWIRVGSQSIVYTGDYNMTPDRHLGAAWIDKCRPDLL-------------ISEST 205
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
++ + + E + L + C + GG VLIP+ +G +L
Sbjct: 206 YATTIRD-----------SKRCRERDFLKKVHEC----IDRGGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL--FAHVKLIK 302
+ + E +LK+P+Y + E+ Y W Q+ +K F + F H+K
Sbjct: 251 LLETYWERMNLKVPVYFALGLTEKANNYYKMFITW-TNQKIKKTFVQRNMFDFKHIKPFD 309
Query: 303 EKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
+ I +P + +VF+ L G ++ + ++W+ + +++++
Sbjct: 310 KAYI------DNPGAM-------VVFATPGMLHAGLSLQIFKKWAPNEANMVIM 350
>gi|328873132|gb|EGG21499.1| integrator complex subunit 11 [Dictyostelium fasciculatum]
Length = 645
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 103/490 (21%), Positives = 185/490 (37%), Gaps = 108/490 (22%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ T M G+ IY+T I +++E+
Sbjct: 75 ALPYFTEMCGYDGPIYMTLPTKAIVPILLEDY---------------------------- 106
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKI++ G E P + +KDC+ KV + + + L IKA+ +G
Sbjct: 107 ------RKISVDRKG-ETNFFTPQM--IKDCMKKVIPIALHQTIKVDDELSIKAYYAGHV 157
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + + ++ Y N + + +L++ TE ++
Sbjct: 158 LGAAMFYAKVGEESVVYTGDYNMTPDRHLGSAWIDQVRPNLLI---------TETTYATT 208
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E VE+ GG VLIP+ +G +L
Sbjct: 209 IRDSKRGRER--DFLKRVHECVEK-----------------GGKVLIPVFALGRVQELCI 249
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
I + E +L +PIY +AE+ Y W Q+ ++ F +F K IK
Sbjct: 250 LIDSYWEQMNLNVPIYFSEGLAEKANFYYKLFITW-TNQKIKQTFVKRNMF-DFKHIKPF 307
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLV--------- 355
H L + P ++F+ L G ++ + ++W+ + ++ +
Sbjct: 308 DRH----------LADAPGPMVLFATPGMLHAGASLEVFKKWAPNELNMTIIPGYCVVGT 357
Query: 356 -----LENEVDAELAVLPFKP---ISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEE 407
L N ++ + K + K+ SF + + + L+K+ QPK VL
Sbjct: 358 VGNKLLSNAGGPQMVEIDKKTTLEVKCKIHNLSFSAHADAKGIMQLIKMSQPKNVLLVHG 417
Query: 408 WRTHVSF-SDVTS--FSVSHY--SENETIHIPSLKESAELEIAADIASKFQWRMLKQKKL 462
+ + + SD S F V Y + T++I ES++L I DI+SK +LK++ L
Sbjct: 418 EKEKMRYLSDKISKDFGVPCYFPANGVTVNI----ESSKL-IPIDISSK----LLKRQIL 468
Query: 463 NITRLKGRLF 472
++ + F
Sbjct: 469 EYSQANSKQF 478
>gi|296206479|ref|XP_002750226.1| PREDICTED: integrator complex subunit 11 isoform 2 [Callithrix
jacchus]
Length = 499
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 280
++V+ GG VLIP+ +G +L + F E +LK+PIY + + E+ Y W
Sbjct: 126 ETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW- 184
Query: 281 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 340
Q+ K F +F K I F + + P +VF+ L G ++
Sbjct: 185 TNQKIRKTFVQRNMFEF------KHIKAF-----DRAFADNPGPMVVFATPGMLHAGQSL 233
Query: 341 HLLRRWSGDHNSLLVL 356
+ R+W+G+ +++++
Sbjct: 234 QIFRKWAGNEKNMVIM 249
>gi|426327396|ref|XP_004024504.1| PREDICTED: integrator complex subunit 11 isoform 4 [Gorilla gorilla
gorilla]
Length = 499
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 280
++V+ GG VLIP+ +G +L + F E +LK+PIY + + E+ Y W
Sbjct: 126 ETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW- 184
Query: 281 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 340
Q+ K F +F K I F + + P +VF+ L G ++
Sbjct: 185 TNQKIRKTFVQRNMFEF------KHIKAF-----DRAFADNPGPMVVFATPGMLHAGQSL 233
Query: 341 HLLRRWSGDHNSLLVL 356
+ R+W+G+ +++++
Sbjct: 234 QIFRKWAGNEKNMVIM 249
>gi|356559790|ref|XP_003548180.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
2-like isoform 2 [Glycine max]
Length = 743
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 93/450 (20%), Positives = 169/450 (37%), Gaps = 114/450 (25%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + G SA +Y TE R+G L M Y Q+ ++ S E +
Sbjct: 70 ALPYAMKQLGLSAPVYSTEPVYRLGLLTM---------YDQYLSRKQVS--------EFD 112
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGI---LIIKAFSS 121
L + + V L + + ++G ++I +
Sbjct: 113 LF---------------------TLDDIDSSFQSVTRLTYSQNHHFSGKGEGIVIAPHVA 151
Query: 122 GLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRA---IQGSDLILYSDLSSLDSTE 178
G +G W I+ ++ Y A+DF++R + G+ L
Sbjct: 152 GHLLGGTIWKITKDGEDVIY----------AVDFNHRKERHLNGTVL------------- 188
Query: 179 DIDQSSFSDDNNNWEELMNSLSN--YDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRV 236
SF + N+L+N Y ++ + + I +++ GG+VL+P++ V
Sbjct: 189 ----GSFVRPAVLITDAYNALNNQPYRRQNDKEFGGNHLFNLVIKTLREGGNVLLPVDTV 244
Query: 237 GVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLC-------KQRQEKLF 289
G L+L+ + + +L PIY ++ VA + Y + EW+ ++ +E +F
Sbjct: 245 GRVLELILMLESYWTDENLNYPIYFLTYVASSTIDYVKSFLEWMSDTIAKSFEKTRENIF 304
Query: 290 SGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD 349
L +V L+ ++ +L P +V + SL G + + W+ D
Sbjct: 305 ----LLKYVTLL----------INKTELDNAPDGPKVVLASMASLEAGFSHEIFVEWAND 350
Query: 350 -HNSLLVLENEVDAELAVL-----PFKPISMKVLQCSFLSGKKL---QKVQPLLKILQPK 400
N +L E A LA + P K + + V + L G++L ++ Q +K K
Sbjct: 351 VKNLVLFTERGQFATLARMLQADPPPKAVKVVVSKRVALVGEELIAYEEEQNRIKKEALK 410
Query: 401 LVLFPEEWRTHVSFSDVTSFSVSHYSENET 430
L EE F SH ++N T
Sbjct: 411 ASLMKEE-----------EFKTSHGADNNT 429
>gi|427785581|gb|JAA58242.1| Putative mrna cleavage and polyadenylation factor ii complex brr5
cpsf subunit [Rhipicephalus pulchellus]
Length = 587
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/354 (18%), Positives = 126/354 (35%), Gaps = 81/354 (22%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP++T M G+S +Y+T I +++E+
Sbjct: 76 ALPYMTEMVGYSGPVYMTHPTKAICPILLEDF---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKI + G A ++DC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKITVDRKGET---NFFTSAMIRDCMRKVVAVNLHQAVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + DL++ TE ++
Sbjct: 159 LGAAMFRIRVGSQSVVYTGDYNMTPDRHLGAAWLDKCRPDLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D + E + L + C + GG VLIP+ +G +L
Sbjct: 210 IRDS---------------KRCRERDFLTKVHDC----IDKGGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL--FAHVKLIK 302
+ + + +L++PIY + E+ Y W Q+ K F + F H+K
Sbjct: 251 LLETYWDRMNLRVPIYFAVGLTEKATNYYKMFITW-TNQKIRKTFVQRNMFDFKHIKPFD 309
Query: 303 EKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
+ ++ P +VF+ L G ++ + ++W+ +++++
Sbjct: 310 -------------RAFIDNPGPMVVFATPGMLHAGLSLQIFKKWAPFEANMVIM 350
>gi|402852595|ref|XP_003891003.1| PREDICTED: integrator complex subunit 11 isoform 2 [Papio anubis]
Length = 499
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 280
++V+ GG VLIP+ +G +L + F E +LK+PIY + + E+ Y W
Sbjct: 126 ETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW- 184
Query: 281 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 340
Q+ K F +F K I F + + P +VF+ L G ++
Sbjct: 185 TNQKIRKTFVQRNMFEF------KHIKAF-----DRAFADNPGPMVVFATPGMLHAGQSL 233
Query: 341 HLLRRWSGDHNSLLVL 356
+ R+W+G+ +++++
Sbjct: 234 QIFRKWAGNEKNMVIM 249
>gi|374253828|ref|NP_001243392.1| integrator complex subunit 11 isoform 5 [Homo sapiens]
gi|119576639|gb|EAW56235.1| cleavage and polyadenylation specific factor 3-like, isoform CRA_c
[Homo sapiens]
gi|119576644|gb|EAW56240.1| cleavage and polyadenylation specific factor 3-like, isoform CRA_c
[Homo sapiens]
Length = 499
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 280
++V+ GG VLIP+ +G +L + F E +LK+PIY + + E+ Y W
Sbjct: 126 ETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW- 184
Query: 281 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 340
Q+ K F +F K I F + + P +VF+ L G ++
Sbjct: 185 TNQKIRKTFVQRNMFEF------KHIKAF-----DRAFADNPGPMVVFATPGMLHAGQSL 233
Query: 341 HLLRRWSGDHNSLLVL 356
+ R+W+G+ +++++
Sbjct: 234 QIFRKWAGNEKNMVIM 249
>gi|397476280|ref|XP_003809535.1| PREDICTED: integrator complex subunit 11 isoform 3 [Pan paniscus]
Length = 499
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 108/260 (41%), Gaps = 35/260 (13%)
Query: 116 IKAFSSGLDIGACNWIISGAKGNIAYISGSN---------------FASGHAMDFDYRAI 160
+ +G D+G ++S A N+ G + + +GH + I
Sbjct: 6 VTPLGAGQDVGRSCILVSIAGKNVMLDCGMHMGFNDDVDDELEIKAYYAGHVLGAAMFQI 65
Query: 161 Q-GSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLA---FIC 216
+ GS+ ++Y+ ++ + + N L+ + S Y ++ + ++ F+
Sbjct: 66 KVGSESVVYTGDYNMTPDRHLGAAWIDKCRPN---LLITESTYATTIRDSKRCRERDFLK 122
Query: 217 SCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTI 276
++V+ GG VLIP+ +G +L + F E +LK+PIY + + E+ Y
Sbjct: 123 KVH-ETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLF 181
Query: 277 PEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRL 336
W Q+ K F +F K I F + + P +VF+ L
Sbjct: 182 IPW-TNQKIRKTFVQRNMFEF------KHIKAF-----DRAFADNPGPMVVFATPGMLHA 229
Query: 337 GPTIHLLRRWSGDHNSLLVL 356
G ++ + R+W+G+ +++++
Sbjct: 230 GQSLQIFRKWAGNEKNMVIM 249
>gi|307170840|gb|EFN62951.1| Integrator complex subunit 11 [Camponotus floridanus]
Length = 595
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/354 (18%), Positives = 130/354 (36%), Gaps = 81/354 (22%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ T M G++ IY+T I +++E++
Sbjct: 76 ALPYFTEMVGYTGPIYMTHPTKAIAPILLEDM---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RK+A+ G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKVAVERKGES---NFFTSQMIKDCMKKVVAVTLHQSVMVDPELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I +I Y N + + DL+ I +S+
Sbjct: 159 LGAAMFWIRVGSQSIVYTGDYNMTPDRHLGAAWIDKCRPDLL-------------ISEST 205
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
++ + + E + L + C + GG VLIP+ +G +L
Sbjct: 206 YATTIRD-----------SKRCRERDFLKKVHEC----IDKGGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL--FAHVKLIK 302
+ + E +LK+P+Y + E+ Y W Q+ +K F + F H+K
Sbjct: 251 LLETYWERMNLKVPVYFALGLTEKANNYYKMFITW-TNQKIKKTFVQRNMFEFKHIKPFD 309
Query: 303 EKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
+ I +P + +VF+ L G ++ + ++W+ + +++++
Sbjct: 310 KAYI------DNPGAM-------VVFATPGMLHAGLSLQIFKKWAPNEANMVIM 350
>gi|403297740|ref|XP_003939710.1| PREDICTED: integrator complex subunit 11 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 499
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 108/260 (41%), Gaps = 35/260 (13%)
Query: 116 IKAFSSGLDIGACNWIISGAKGNIAYISGSN---------------FASGHAMDFDYRAI 160
+ +G D+G ++S A N+ G + + +GH + I
Sbjct: 6 VTPLGAGQDVGRSCILVSIAGKNVMLDCGMHMGFNDDVDDELEIKAYYAGHVLGAAMFQI 65
Query: 161 Q-GSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLA---FIC 216
+ GS+ ++Y+ ++ + + N L+ + S Y ++ + ++ F+
Sbjct: 66 KVGSESVVYTGDYNMTPDRHLGAAWIDKCRPN---LLITESTYATTIRDSKRCRERDFLK 122
Query: 217 SCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTI 276
++V+ GG VLIP+ +G +L + F E +LK+PIY + + E+ Y
Sbjct: 123 KVH-ETVEHGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLF 181
Query: 277 PEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRL 336
W Q+ K F +F K I F + + P +VF+ L
Sbjct: 182 IPW-TNQKIRKTFVQRNMFEF------KHIKAF-----DRAFADNPGPMVVFATPGMLHA 229
Query: 337 GPTIHLLRRWSGDHNSLLVL 356
G ++ + R+W+G+ +++++
Sbjct: 230 GQSLQIFRKWAGNEKNMVIM 249
>gi|396082329|gb|AFN83939.1| putative beta-lactamase fold-containingexonuclease [Encephalitozoon
romaleae SJ-2008]
Length = 496
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 117/309 (37%), Gaps = 52/309 (16%)
Query: 53 SGPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEAC 109
+GP +M E+ P L RKI G+ G + +C+ KV T+ E
Sbjct: 84 NGPVYMTLPTKEVCPVLLDDFRKIVEGK-----GDSIFTYQDILNCMKKVTTINMNETYK 138
Query: 110 YNGILIIKAFSSGLDIGACNWIISGAKGNIAYISG-SNFASGHAMDFDYRAIQGSDLILY 168
++ I + +G +GA + + ++ Y S H + ++ LI
Sbjct: 139 HDEDFYITPYYAGHVLGAAMFHVVVGDQSVVYTGDYSTTPDKHLGPASIKCVRPDLLITE 198
Query: 169 SDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGS 228
S S+ T D + V+E E L + C + GG
Sbjct: 199 STYGSI--TRDCRR-----------------------VKEREFLKAVSDC----IARGGR 229
Query: 229 VLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKL 288
VLIPI +G +L + + E + LKIP+Y S + E+ + + + K+
Sbjct: 230 VLIPIFALGRAQELCLLLDGYWERTGLKIPVYFSSGLTEKANEIYKKFISYTNETVKRKI 289
Query: 289 FSGDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWS 347
F + + H+K + K M + P ++F+ L G ++ + + W
Sbjct: 290 FERNVFEYKHIKPFQ-------------KYYMENKGPMVLFASPGMLHSGMSLRMFKEWC 336
Query: 348 GDHNSLLVL 356
D +L+++
Sbjct: 337 EDEKNLVII 345
>gi|146296048|ref|YP_001179819.1| beta-lactamase domain-containing protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409624|gb|ABP66628.1| beta-lactamase domain protein [Caldicellulosiruptor saccharolyticus
DSM 8903]
Length = 821
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 121/284 (42%), Gaps = 57/284 (20%)
Query: 91 HVKDCISKVQTLRFGEEACYNGILIIKA--FSSGLDIGACNWIISGAKGNIAYISGSNFA 148
+V+D + + T+ +G + + IK F +G +GA I +G++ Y +F+
Sbjct: 114 NVEDLLDR--TITYGFNYTFEPLEGIKVTFFPAGHILGASMIFIQTQEGSVLYTG--DFS 169
Query: 149 SGHAMDFDYRAIQG--SDLILYSDLSSLDSTEDIDQSSFSD---DNNNWEE--LMNSLSN 201
+ + D +I D++ I +S++ D N N+EE L NS+
Sbjct: 170 TDKQLTVDKASIPKIRPDVV-------------ICESTYGDRLHTNRNYEEERLFNSIYE 216
Query: 202 YDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYI 261
+ + GG VLIP +G +++ + +M+ ++ ++I
Sbjct: 217 F--------------------ISKGGKVLIPAFAIGRAQEIILILRNYMKKKKVEFNVFI 256
Query: 262 ISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLF--AHVKLIKEKKIHVFPAVHSPKLLM 319
V E + Y N P +L + +K+ G+ +F ++ +I +KK + +M
Sbjct: 257 DGMVREVIRVYKNN-PTFLSSRYYKKVLKGEEIFLSDNIDIITDKK--------QREEIM 307
Query: 320 NWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAE 363
+ +PC++ S L GP++ + + N+L+ + D E
Sbjct: 308 SSSDPCVIISSSGMLTGGPSVFYAEKLVENQNALIAITGYQDEE 351
>gi|156403103|ref|XP_001639929.1| predicted protein [Nematostella vectensis]
gi|156227060|gb|EDO47866.1| predicted protein [Nematostella vectensis]
Length = 527
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/353 (18%), Positives = 127/353 (35%), Gaps = 79/353 (22%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + M G+ IY+T I +++E+ YR+ E G E
Sbjct: 47 ALPYFSEMVGYDGPIYMTHPTKAICPILLED-------YRKI--TVERKG-------ETN 90
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
S + +KDC+ KV + + + L IKA+ +G
Sbjct: 91 FFTSQM---------------------IKDCMKKVVPINLHQSIKVDDELEIKAYYAGHV 129
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + + ++ Y N + + D+++ TE ++
Sbjct: 130 LGAVMFHMRVGTESVVYTGDYNMTPDRHLGSAWIDKCRPDILI---------TESTYATT 180
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L E++E+ GG VLIP+ +G +L
Sbjct: 181 IRDSKRCRER--DFLKKVHETMEK-----------------GGKVLIPVFALGRAQELCI 221
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKE 303
+ + E +LK PIY + + E+ Y W ++ + + F H+K
Sbjct: 222 LLETYWERMNLKAPIYFSTGLTEKANHYYKLFITWTNQKIKNTFVQRNMFEFEHIKPFDR 281
Query: 304 KKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I + P +VF+ L G ++ + ++W+ + N+++V+
Sbjct: 282 SYI-------------DNPGPMVVFATPGMLHAGLSLQIFKKWASNENNMVVI 321
>gi|442751667|gb|JAA67993.1| Putative cleavage and polyadenylation specificity factor cpsf
subunit [Ixodes ricinus]
Length = 596
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/352 (18%), Positives = 126/352 (35%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP++T M G++ +Y+T I +++E+
Sbjct: 76 ALPYMTEMVGYAGPVYMTHPTKAICPILLEDF---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKI + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKITVDRKGET---NFFTSQMIKDCMKKVVAVNLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + DL++ TE ++
Sbjct: 159 LGAAMFHIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E + L+ + ++E GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER--DFLTKVHDCIDE-----------------GGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ + + +LK+PIY + E+ Y W Q+ K F +F K
Sbjct: 251 LLETYWDRMNLKVPIYFAVGLTEKATNYYKMFITW-TNQKIRKTFVQRNMFDF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + ++ P +VF+ L G ++ + ++W+ +++++
Sbjct: 304 HIKPF-----DRAFIDNPGPMVVFATPGMLHAGLSLQIFKKWAPVEGNMVIM 350
>gi|359415409|ref|ZP_09207872.1| mRNA cleavage/polyadenylation specificity factor, 100 kD subunit
[Candidatus Haloredivivus sp. G17]
gi|358034266|gb|EHK02708.1| mRNA cleavage/polyadenylation specificity factor, 100 kD subunit
[Candidatus Haloredivivus sp. G17]
Length = 623
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 17/196 (8%)
Query: 166 ILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNY----DESVEEMEKLAFICSCAID 221
ILY+ + D+TE + ++ D N E M + S Y DE E S
Sbjct: 341 ILYTGDYNYDTTETLREA---DTNFQRVETMITESTYGGRDDEQTPREEANKKFLSKVKQ 397
Query: 222 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLC 281
++ GG V++P+ VG ++L +A M+ S +YI + + +T PE+L
Sbjct: 398 TLSKGGKVIVPVFAVGRSQEVLALLADEMDRSYFDYNVYIDGMINDANALHT-AYPEFLS 456
Query: 282 KQRQEKLFSGDPLFAHVKLIKEKKIHVFP-AVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 340
+ Q+K++ + F K ++ P HS + + + CI+ + S+ GP +
Sbjct: 457 NKIQDKVYQDESPFL--------KDNIKPIGSHSERKEVFEDDACIILTTSGSITGGPVM 508
Query: 341 HLLRRWSGDHNSLLVL 356
L + + D ++ L+
Sbjct: 509 SYLEKEASDPDNSLIF 524
>gi|39645207|gb|AAH13904.2| CPSF3L protein, partial [Homo sapiens]
Length = 429
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 280
++V+ GG VLIP+ +G +L + F E +LK+PIY + + E+ Y W
Sbjct: 56 ETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW- 114
Query: 281 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 340
Q+ K F +F K I F + + P +VF+ L G ++
Sbjct: 115 TNQKIRKTFVQRNMFEF------KHIKAF-----DRAFADNPGPMVVFATPGMLHAGQSL 163
Query: 341 HLLRRWSGDHNSLLVL 356
+ R+W+G+ +++++
Sbjct: 164 QIFRKWAGNEKNMVIM 179
>gi|119576641|gb|EAW56237.1| cleavage and polyadenylation specific factor 3-like, isoform CRA_e
[Homo sapiens]
Length = 578
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 280
++V+ GG VLIP+ +G +L + F E +LK+PIY + + E+ Y W
Sbjct: 205 ETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW- 263
Query: 281 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 340
Q+ K F +F K I F + + P +VF+ L G ++
Sbjct: 264 TNQKIRKTFVQRNMFEF------KHIKAF-----DRAFADNPGPMVVFATPGMLHAGQSL 312
Query: 341 HLLRRWSGDHNSLLVL 356
+ R+W+G+ +++++
Sbjct: 313 QIFRKWAGNEKNMVIM 328
>gi|119576647|gb|EAW56243.1| cleavage and polyadenylation specific factor 3-like, isoform CRA_i
[Homo sapiens]
Length = 502
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 280
++V+ GG VLIP+ +G +L + F E +LK+PIY + + E+ Y W
Sbjct: 129 ETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW- 187
Query: 281 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 340
Q+ K F +F K I F + + P +VF+ L G ++
Sbjct: 188 TNQKIRKTFVQRNMFEF------KHIKAF-----DRAFADNPGPMVVFATPGMLHAGQSL 236
Query: 341 HLLRRWSGDHNSLLVL 356
+ R+W+G+ +++++
Sbjct: 237 QIFRKWAGNEKNMVIM 252
>gi|426327398|ref|XP_004024505.1| PREDICTED: integrator complex subunit 11 isoform 5 [Gorilla gorilla
gorilla]
Length = 502
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 280
++V+ GG VLIP+ +G +L + F E +LK+PIY + + E+ Y W
Sbjct: 129 ETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW- 187
Query: 281 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 340
Q+ K F +F K I F + + P +VF+ L G ++
Sbjct: 188 TNQKIRKTFVQRNMFEF------KHIKAF-----DRAFADNPGPMVVFATPGMLHAGQSL 236
Query: 341 HLLRRWSGDHNSLLVL 356
+ R+W+G+ +++++
Sbjct: 237 QIFRKWAGNEKNMVIM 252
>gi|401827835|ref|XP_003888210.1| putative RNA-processing beta-lactamase-fold exonuclease
[Encephalitozoon hellem ATCC 50504]
gi|392999410|gb|AFM99229.1| putative RNA-processing beta-lactamase-fold exonuclease
[Encephalitozoon hellem ATCC 50504]
Length = 496
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 120/309 (38%), Gaps = 52/309 (16%)
Query: 53 SGPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEAC 109
+GP +M E+ P L RKI +G G + + +C+ KV T+ E
Sbjct: 84 NGPIYMTLPTKEVCPVLLDDFRKI-VGAKGDNIFS----YQDIVNCMKKVTTISMSETYK 138
Query: 110 YNGILIIKAFSSGLDIGACNWIISGAKGNIAYISG-SNFASGHAMDFDYRAIQGSDLILY 168
++ I + +G +GA + + ++ Y S H + ++ LI
Sbjct: 139 HDEDFYITPYYAGHVLGAAMFHVVVGDQSVVYTGDYSTTPDKHLGPASIKCVRPDLLITE 198
Query: 169 SDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGS 228
S S+ T D + V+E E L I C + GG
Sbjct: 199 STYGSI--TRDCRR-----------------------VKEREFLKAISDC----IARGGR 229
Query: 229 VLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKL 288
VLIPI +G +L + + E + LK+P+Y S + E+ + + ++K+
Sbjct: 230 VLIPIFALGRAQELCLLLDGYWERTGLKVPVYFSSGLTEKANEIYKKFISYTNETVKKKI 289
Query: 289 FSGDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWS 347
F + + H+K + K M+ + P ++F+ L G ++ + + W
Sbjct: 290 FERNVFEYKHIKPFQ-------------KYYMDNEGPMVLFASPGMLHSGMSLRMFKEWC 336
Query: 348 GDHNSLLVL 356
D +L+++
Sbjct: 337 SDEKNLVII 345
>gi|374253826|ref|NP_001243391.1| integrator complex subunit 11 isoform 4 [Homo sapiens]
Length = 502
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 280
++V+ GG VLIP+ +G +L + F E +LK+PIY + + E+ Y W
Sbjct: 129 ETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW- 187
Query: 281 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 340
Q+ K F +F K I F + + P +VF+ L G ++
Sbjct: 188 TNQKIRKTFVQRNMFEF------KHIKAF-----DRAFADNPGPMVVFATPGMLHAGQSL 236
Query: 341 HLLRRWSGDHNSLLVL 356
+ R+W+G+ +++++
Sbjct: 237 QIFRKWAGNEKNMVIM 252
>gi|241245173|ref|XP_002402434.1| cleavage and polyadenylation specificity factor, putative [Ixodes
scapularis]
gi|215496345|gb|EEC05985.1| cleavage and polyadenylation specificity factor, putative [Ixodes
scapularis]
Length = 596
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/352 (18%), Positives = 125/352 (35%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP++T M G++ +Y+T I +++E+
Sbjct: 76 ALPYMTEMVGYAGPVYMTHPTKAICPILLEDF---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKI + G +KDC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKITVDRKGET---NFFTSQMIKDCMKKVVAVNLHQTVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + DL++ TE ++
Sbjct: 159 LGAAMFHIRVGSQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D + E + L + C + GG VLIP+ +G +L
Sbjct: 210 IRDS---------------KRCRERDFLTKVHDC----IDKGGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ + + +LK+PIY + E+ Y W Q+ K F +F K
Sbjct: 251 LLETYWDRMNLKVPIYFAVGLTEKATNYYKMFITW-TNQKIRKTFVQRNMFDF------K 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + ++ P +VF+ L G ++ + ++W+ +++++
Sbjct: 304 HIKPF-----DRAFIDNPGPMVVFATPGMLHAGLSLQIFKKWAPVEGNMVIM 350
>gi|356502382|ref|XP_003519998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Glycine max]
Length = 516
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 99/457 (21%), Positives = 175/457 (38%), Gaps = 79/457 (17%)
Query: 53 SGPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEAC 109
+GP +M + L P L RK+ + G E IA +C+ KV + +
Sbjct: 86 NGPVYMTYPTKALAPLMLEDYRKVMVDRRGEEELFSSDQIA---ECMKKVIAVDLRQTVQ 142
Query: 110 YNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS 169
L I+A+ +G IGA + + Y N D A Q L L
Sbjct: 143 VEKDLQIRAYYAGHVIGAAMFYAKVGDAEMVYTGDYNMTP----DRHLGAAQIDRLRL-- 196
Query: 170 DLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSV 229
L TE ++ D S Y E E L + C V GG V
Sbjct: 197 ---DLLITESTYATTIRD------------SRY---AREREFLKAVHKC----VSCGGKV 234
Query: 230 LIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLF 289
LIP +G +L + + E +LK+PIY + + + AY + W +Q+ + +
Sbjct: 235 LIPTFALGRAQELCILLEDYWERMNLKVPIYFSAGLTIQANAYYKMLIRW-TRQKIKDTY 293
Query: 290 SGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD 349
S F K + F + +++ PC++F+ L G ++ + + W+
Sbjct: 294 SKHNAFDF------KNVQKF-----ERSMIDAPGPCVLFATPGMLSGGFSVEVFKHWAVS 342
Query: 350 HNSLLVL-----------------ENEVDAELAVLPFKPISMK--VLQCSFLSGKKLQKV 390
N+L+ L ++VD + P I ++ + Q +F + +
Sbjct: 343 ENNLVSLPGYCVPGTIGHKLMSDKHDKVDLD----PNTKIDVRCQIHQLAFSPHTDSKGI 398
Query: 391 QPLLKILQPK-LVLFPEEWRTHVSFSDV--TSFSVSHY--SENETIHIPS----LKESAE 441
L+ L PK ++L E S + + + Y + NET+ IPS E+++
Sbjct: 399 MDLVNFLSPKHVILVHGEKHKMASLKEKIHSELGIQCYDPANNETVTIPSANYVYAETSD 458
Query: 442 LEIAADIASKFQWRMLKQKKLNITRL-KGRLFVNHGK 477
I + ++ F ++ ++ R+ +G L + GK
Sbjct: 459 TFIRSCLSPNFTFQKCSSLQVEDERVAEGVLVLEKGK 495
>gi|242053629|ref|XP_002455960.1| hypothetical protein SORBIDRAFT_03g028040 [Sorghum bicolor]
gi|241927935|gb|EES01080.1| hypothetical protein SORBIDRAFT_03g028040 [Sorghum bicolor]
Length = 558
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 96/481 (19%), Positives = 167/481 (34%), Gaps = 101/481 (20%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ T + G+ IY+T + M+E+ + M+ R G EE +E++
Sbjct: 78 ALPYFTEICGYHGPIYMTYPTKALAPFMLEDYRKVTMDQR---GEEEQ-----YSYEDI- 128
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
LR C+ KV + + + L+I+A+ +G
Sbjct: 129 -----LR-----------------------CMKKVIPMDLKQTIQVDKDLVIRAYYAGHV 160
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
IGA + Y N D A Q L L L TE +
Sbjct: 161 IGAAMIYAKVGDAAMVYTGDYNMTP----DRHLGAAQIDHLKL-----DLLITESTYAKT 211
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D + E E L + C V GG VLIP +G +L
Sbjct: 212 IRDSKH---------------AREREFLKAVHKC----VSGGGKVLIPTFALGRAQELCM 252
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKE 303
+ + E LK+PIY + + + Y + W ++ ++ +P F HV
Sbjct: 253 LLDDYWERMDLKVPIYFSAGLTIQANVYYKMLIGWTSQKIKDSHAVHNPFDFKHV----- 307
Query: 304 KKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL-----EN 358
H + +N PC++F+ + G ++ ++W+ +L+ L
Sbjct: 308 --------CHFERSFINNPGPCVLFATPGMISGGFSLEAFKKWAPSEKNLITLPGYCVSG 359
Query: 359 EVDAELAV-----LPFKPISMKVL----QCSFLSGKKLQKVQPLLKILQPKLVLFPEEWR 409
+ +L + +K I + V Q +F + + L + L PK V+ +
Sbjct: 360 TIGHKLMCGKPTRIDYKDIHIDVRCQIHQLAFSPHTDSKGIMDLTEFLSPKHVILVHGEK 419
Query: 410 THVSF-----SDVTSFSVSHYSENETIHIPS---LKESAELEIAADIASKFQWRMLKQKK 461
++F + NE++ IP+ LK SA A + R L ++
Sbjct: 420 PQMAFLKERIESELGMPCYYPGNNESVSIPTTQNLKMSATERFITSCAVEQGKRSLHKRN 479
Query: 462 L 462
L
Sbjct: 480 L 480
>gi|391330858|ref|XP_003739869.1| PREDICTED: integrator complex subunit 11-like [Metaseiulus
occidentalis]
Length = 601
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 75/418 (17%), Positives = 145/418 (34%), Gaps = 99/418 (23%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEEL--ICMNMEYRQFYGAEESSGPQWMKWEE 62
LPF++ M G++ IY+T I +++E+ IC++ + Q + ++
Sbjct: 76 ALPFMSEMIGYTGPIYMTHPTKAICPILLEDFRKICVDKKGEQNFFSQ------------ 123
Query: 63 LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSG 122
++DC+ KV E + L IKA+ +G
Sbjct: 124 ---------------------------GMIRDCMKKVIPCNLHETIKVDSELEIKAYYAG 156
Query: 123 LDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQ 182
+GA + I +I Y N + + DL++ TE
Sbjct: 157 HVLGAAMFHIKVGHISIVYTGDYNMTPDRHLGAAWIDRCRPDLLI---------TESTYA 207
Query: 183 SSFSDDNNNWE-ELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQ 241
++ D E + +N + D ++ GG VLIP +G +
Sbjct: 208 TTIRDSKRCRERDFLNKVH--------------------DCIERGGKVLIPAFALGRAQE 247
Query: 242 LLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL-FAHVKL 300
L + + E +LK PIY + + E+ Y W ++ + + F H+K
Sbjct: 248 LCILLETYWERMNLKCPIYFAAGLTEKATNYYKMFITWTNQKIRNTFVDHNMFDFKHIKP 307
Query: 301 IKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLL------ 354
I + P +VF+ L G ++ + ++W+ +++
Sbjct: 308 FDRAYI-------------DNPGPMVVFATPGMLHAGLSLQIFKKWAPFEENMVIMPGYC 354
Query: 355 --------VLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLF 404
+L E+ F + + V SF + + + L++ +PK VL
Sbjct: 355 VSGTVGAKILNGARRVEIEKGNFIDVKLSVEYLSFSAHADAKGIMQLIRQCEPKNVLL 412
>gi|427779771|gb|JAA55337.1| Putative mrna cleavage and polyadenylation factor ii complex brr5
cpsf subunit [Rhipicephalus pulchellus]
Length = 621
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/371 (17%), Positives = 132/371 (35%), Gaps = 81/371 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP++T M G+S +Y+T I +++E+
Sbjct: 76 ALPYMTEMVGYSGPVYMTHPTKAICPILLEDF---------------------------- 107
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKI + G A ++DC+ KV + + + L IKA+ +G
Sbjct: 108 ------RKITVDRKGET---NFFTSAMIRDCMRKVVAVNLHQAVQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I ++ Y N + + DL++ TE ++
Sbjct: 159 LGAAMFRIRVGSQSVVYTGDYNMTPDRHLGAAWLDKCRPDLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAF-----------------ICSCAIDSVKAGG 227
D E + L+ + +++ K+ + D + GG
Sbjct: 210 IRDSKRCRER--DFLTKVHDCIDKGGKVLIPVFXTTIRDSKRCRERDFLTKVHDCIDKGG 267
Query: 228 SVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEK 287
VLIP+ +G +L + + + +L++PIY + E+ Y W Q+ K
Sbjct: 268 KVLIPVFALGRAQELCILLETYWDRMNLRVPIYFAVGLTEKATNYYKMFITW-TNQKIRK 326
Query: 288 LFSGDPL--FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRR 345
F + F H+K + ++ P +VF+ L G ++ + ++
Sbjct: 327 TFVQRNMFDFKHIKPFD-------------RAFIDNPGPMVVFATPGMLHAGLSLQIFKK 373
Query: 346 WSGDHNSLLVL 356
W+ +++++
Sbjct: 374 WAPFEANMVIM 384
>gi|384484008|gb|EIE76188.1| hypothetical protein RO3G_00892 [Rhizopus delemar RA 99-880]
Length = 657
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 112/287 (39%), Gaps = 41/287 (14%)
Query: 88 CIAHVKDCISKVQTLRFGEEACYNGI---LIIKAFSSGLDIGACNWIISGAKGNIAYISG 144
+ V + K+ LR+ + G + I A+++ +G W I I Y
Sbjct: 67 TLEDVDNAFDKITPLRYSQPFSLPGKCQGITITAYAAAHTVGGTIWKIKQDTDEIVY--- 123
Query: 145 SNFASGHAMDFDYRAIQGSD-LILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYD 203
A+DF++R D +L+S LDS S D N + + +
Sbjct: 124 -------AVDFNHRKEYHLDGTVLHSGGVVLDSL--TRPSLLITDAYNSQVVHPA----- 169
Query: 204 ESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIIS 263
++ A + + S+ GGSVL+P + L+L + + L P+ ++S
Sbjct: 170 ----RKDRYAAMFDTMLTSLNKGGSVLLPTDSSARVLELAYLLDQHWSQNQLNYPLIMLS 225
Query: 264 SVAEELLAYTNTIPEWLCKQRQEKLFSG--DPL-FAHVKLIKEKKIHVFPAVHSPKLLMN 320
+ + + + + EW+ ++ K +P F +V+L H + L N
Sbjct: 226 NTSYHTVHFAKIMLEWMGEELTRKFSQSRENPYEFKYVRL-----------CHKIEDLDN 274
Query: 321 WQEPCIVFSPHWSLRLGPTIHLLRRWSGD--HNSLLVLENEVDAELA 365
+ P IV + H SL G L RW + N+L++ + LA
Sbjct: 275 YPGPKIVMASHHSLETGFARELFLRWMTNDPQNTLILTDRSAPGTLA 321
>gi|409095356|ref|ZP_11215380.1| RNA-metabolising metallo-beta-lactamase, beta-CASP family protein
[Thermococcus zilligii AN1]
Length = 648
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 21/173 (12%)
Query: 200 SNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPI 259
++Y EE EK + ++K GG VLIP VG +++ + + SL++PI
Sbjct: 396 NDYQMPREEAEKR--LMEVIHQTIKRGGKVLIPAMAVGRAQEIMMVLEEYARVGSLEVPI 453
Query: 260 YIISSVAEELLAYTNTIPEWLCKQRQEKLFSG------DPLFAHVKLIKEKKIHVFPAVH 313
Y+ + E +T PE+L K +E++F +P+F V +E++
Sbjct: 454 YLDGMIWEATAIHT-AYPEYLSKNLREQIFHEGYNPFLNPIFKSVANGRERQD------- 505
Query: 314 SPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 365
+++ EP I+ + L GP++ ++ + D NS++++ + + L
Sbjct: 506 ----IIDSGEPAIIIATSGMLVGGPSVEYFKQLAPDPKNSIILVSYQSEGTLG 554
>gi|222529916|ref|YP_002573798.1| beta-lactamase domain-containing protein [Caldicellulosiruptor
bescii DSM 6725]
gi|222456763|gb|ACM61025.1| beta-lactamase domain protein [Caldicellulosiruptor bescii DSM
6725]
Length = 821
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 131/312 (41%), Gaps = 65/312 (20%)
Query: 65 LLPSALRKIALGEDGSELGGGCPCIA--HVKDCISKVQTLRFGEEACYNGILIIKA--FS 120
LL +LR + + ED P A +V+D + + TL +G + I IK F
Sbjct: 92 LLYDSLRIMEIAEDE------IPIYAEKNVEDLLDR--TLTYGFNYTFEPIEGIKVTFFP 143
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQG--SDLILYSDLSSLDSTE 178
+G +GA I +G+I Y +F++ + D ++ D++
Sbjct: 144 AGHILGASMIFIQTQEGSILYTG--DFSADRQLTVDKASVPKIRPDVV------------ 189
Query: 179 DIDQSSFSD---DNNNWEE--LMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPI 233
I +S++ D N N+EE L N+++ + + GG VLIP
Sbjct: 190 -ICESTYGDRLHTNRNFEEERLFNTVA--------------------EVISQGGKVLIPA 228
Query: 234 NRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDP 293
+G +++ + +M+ + ++I V E + Y N P +L + +++ G+
Sbjct: 229 FAIGRAQEIILILRNYMKKRKVSFNVFIDGMVREVIRVYRNN-PTYLSSRYYKRVLKGEE 287
Query: 294 LF--AHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHN 351
+F ++ ++ +KK + +++ +PC++ S L GP++ + N
Sbjct: 288 IFFADNINVVSDKK--------QREEIISSSDPCVIISSSGMLTGGPSVFYAEKIVQSQN 339
Query: 352 SLLVLENEVDAE 363
+L+ + D E
Sbjct: 340 ALIAITGYQDEE 351
>gi|255553723|ref|XP_002517902.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
gi|223542884|gb|EEF44420.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
Length = 740
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 71/359 (19%), Positives = 132/359 (36%), Gaps = 82/359 (22%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + G SA +Y TE R+G L M Y Q+ + S ++++
Sbjct: 70 ALPYAMKQLGLSAPVYSTEPVYRLGLLTM---------YDQYLSRKAVSEFDLFSLDDID 120
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
+ ++ ++ G G GI+I + L
Sbjct: 121 SAFQNITRLTYSQNHHLSGKG-------------------------EGIVIAPHVAGHL- 154
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRA---IQGSDLILYSDLSSLDSTEDID 181
+G W I+ ++ Y A+DF++R + G+ L
Sbjct: 155 LGGTVWKITKDGEDVVY----------AVDFNHRKERHLNGTVL---------------- 188
Query: 182 QSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQ 241
SF + N+LSN + + F+ + +++AGG+VL+P++ G L+
Sbjct: 189 -ESFVRPAVLITDAYNALSN--QPPRQQRDKEFLEKTILKTLEAGGNVLLPVDTAGRVLE 245
Query: 242 LLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDP---LFAHV 298
LL + F L PI+ ++ V+ + Y + EW+ + + L HV
Sbjct: 246 LLLILEQFWAHRLLNYPIFFLTYVSSSTIDYVKSFLEWMSDSIAKSFETSRDNAFLLKHV 305
Query: 299 K-LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
LI + ++ P V P +V + SL G + + W+ D +L++
Sbjct: 306 TLLINKNELDNAPNV-----------PKVVLASMASLEAGFSHDIFVEWAADVKNLVLF 353
>gi|356559788|ref|XP_003548179.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
2-like isoform 1 [Glycine max]
Length = 738
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 92/448 (20%), Positives = 167/448 (37%), Gaps = 115/448 (25%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ + G SA +Y TE R+G L M Y Q+ ++ S E +
Sbjct: 70 ALPYAMKQLGLSAPVYSTEPVYRLGLLTM---------YDQYLSRKQVS--------EFD 112
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGI---LIIKAFSS 121
L + + V L + + ++G ++I +
Sbjct: 113 LF---------------------TLDDIDSSFQSVTRLTYSQNHHFSGKGEGIVIAPHVA 151
Query: 122 GLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRA---IQGSDLILYSDLSSLDSTE 178
G +G W I+ ++ Y A+DF++R + G+ L
Sbjct: 152 GHLLGGTIWKITKDGEDVIY----------AVDFNHRKERHLNGTVL------------- 188
Query: 179 DIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGV 238
SF + N+L+N + ++ I +++ GG+VL+P++ VG
Sbjct: 189 ----GSFVRPAVLITDAYNALNNQPYRRQNDKEFGDILK---KTLREGGNVLLPVDTVGR 241
Query: 239 FLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLC-------KQRQEKLFSG 291
L+L+ + + +L PIY ++ VA + Y + EW+ ++ +E +F
Sbjct: 242 VLELILMLESYWTDENLNYPIYFLTYVASSTIDYVKSFLEWMSDTIAKSFEKTRENIF-- 299
Query: 292 DPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-H 350
L +V L+ ++ +L P +V + SL G + + W+ D
Sbjct: 300 --LLKYVTLL----------INKTELDNAPDGPKVVLASMASLEAGFSHEIFVEWANDVK 347
Query: 351 NSLLVLENEVDAELAVL-----PFKPISMKVLQCSFLSGKKL---QKVQPLLKILQPKLV 402
N +L E A LA + P K + + V + L G++L ++ Q +K K
Sbjct: 348 NLVLFTERGQFATLARMLQADPPPKAVKVVVSKRVALVGEELIAYEEEQNRIKKEALKAS 407
Query: 403 LFPEEWRTHVSFSDVTSFSVSHYSENET 430
L EE F SH ++N T
Sbjct: 408 LMKEE-----------EFKTSHGADNNT 424
>gi|223997482|ref|XP_002288414.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975522|gb|EED93850.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 557
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 73/369 (19%), Positives = 143/369 (38%), Gaps = 76/369 (20%)
Query: 6 LPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELEL 65
LP+ T GF +I++T + +L++ + + + M + GA++ + E
Sbjct: 73 LPYFTERTGFKGRIFMTHPTKAVIRLLLGDYLKLMMMKKGSGGADKDDNQDVLYTE---- 128
Query: 66 LPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYN--GILIIKAFSSGL 123
A ++ C+ K++ + + + N L A ++G
Sbjct: 129 ------------------------ADLQSCVDKIELIDYHQTIDLNLPSGLKFHALNAGH 164
Query: 124 DIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS---DLSSLDSTEDI 180
+GA + I ++ Y ++M+ D R + ++L Y DL ++ST +
Sbjct: 165 VLGAAMFFIEVGGRSVLY------TGDYSMEED-RHLMAAELPKYHASPDLLIVESTYGV 217
Query: 181 DQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFL 240
+ E+ A V GG LIP+ +G
Sbjct: 218 QVHA----------------------SRAEREARFTGTIERIVTGGGRCLIPVFALGRAQ 255
Query: 241 QLLEQIAIF-MECSSLK-IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL-FAH 297
+LL + + E L+ IPIY S +A L T + + + ++ G+P F+H
Sbjct: 256 ELLLILDEYWQEHPHLQSIPIYYASKMASRALRVYQTYANMMNARIRAQMDLGNPFHFSH 315
Query: 298 VKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVL 356
++ +K ++ F + + P +VF+ L+ G + L RW+GD N +++
Sbjct: 316 IRNLKSIDVNNF----------DDRGPSVVFASPGMLQSGVSRQLFDRWAGDPKNGVMLA 365
Query: 357 ENEVDAELA 365
V+ LA
Sbjct: 366 GYAVEHTLA 374
>gi|313238583|emb|CBY13629.1| unnamed protein product [Oikopleura dioica]
Length = 618
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 77/386 (19%), Positives = 146/386 (37%), Gaps = 58/386 (15%)
Query: 92 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 151
+K+C+ KV+ + + + L IKA+ +G +GA + I+ ++ Y N
Sbjct: 130 IKNCMRKVEIVGLHQVINVDDELSIKAYYAGHVLGAAMFKITVGDESVLYTGDFNMTPDR 189
Query: 152 AMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEK 211
+ + A + +L S+ + + D +S E +
Sbjct: 190 HLGAAW-ADRCKPTVLISESTYATTIRDSKRS-----------------------RERDF 225
Query: 212 LAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLA 271
L I C V+ GG VLIP+ +G +L + + + L +P+Y + +AE+
Sbjct: 226 LKKIHRC----VENGGKVLIPVFALGRAQELCILLEQYWDRMKLNVPVYFTAGLAEKATN 281
Query: 272 YTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPH 331
Y W EK+ S F L K I F ++ MN P + F+
Sbjct: 282 YYKLFVNWT----NEKIKSS---FVERNLFDFKYIKAF----QKEIHMNQSGPQVCFATP 330
Query: 332 WSLRLGPTIHLLRRWSGDHNSLLVLENEVDAELA---------VLPFKPIS----MKVLQ 378
L G ++ + + W D + +++ A F ++ +KV
Sbjct: 331 GMLHAGMSLEIFQNWCTDEKNCIIMPGYCVAGTVGHRLLHGERHFKFNGVNVTSRIKVEY 390
Query: 379 CSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSF-----SDVTSFSVSHYSENETIHI 433
SF + + + ++K+ +PK V+F + F + ET++I
Sbjct: 391 MSFSAHADAKGIMQIIKMTEPKNVMFVHGEAAKMEFLAKKVQKDMGLPCFTPANGETVNI 450
Query: 434 PSLKESAELEIAADIASKFQWRMLKQ 459
S +++I +D+A K R L +
Sbjct: 451 -SCPPQIKVKIESDLARKIMKRSLNR 475
>gi|312127068|ref|YP_003991942.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor
hydrothermalis 108]
gi|311777087|gb|ADQ06573.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor
hydrothermalis 108]
Length = 822
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 132/312 (42%), Gaps = 65/312 (20%)
Query: 65 LLPSALRKIALGEDGSELGGGCPCIA--HVKDCISKVQTLRFGEEACYNGILIIKA--FS 120
LL +LR + + ED P A +V+D + + TL +G + I IK FS
Sbjct: 92 LLYDSLRIMEIAEDE------IPIYAEKNVEDLLDR--TLTYGFNYTFEPIEGIKVTFFS 143
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQG--SDLILYSDLSSLDSTE 178
+G +GA I +G+I Y +F++ + D ++ D++
Sbjct: 144 AGHILGASMIFIQTQEGSILYTG--DFSADKQLTVDKASVPKIRPDIV------------ 189
Query: 179 DIDQSSFSD---DNNNWEE--LMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPI 233
I +S++ D N ++EE L N+++ + + GG VLIP
Sbjct: 190 -ICESTYGDRLHTNRSFEEERLFNTVA--------------------EVISQGGKVLIPA 228
Query: 234 NRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDP 293
+G +++ + +M+ + ++I V E + Y N P +L + +++ G+
Sbjct: 229 FAIGRAQEIILILRNYMKKRKVSFNVFIDGMVREVIRVYRNN-PTYLSSRYYKRVLKGEE 287
Query: 294 LF--AHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHN 351
+F ++ ++ +KK + +++ +PC++ S L GP++ + N
Sbjct: 288 IFLADNINVVSDKK--------QREEIISSSDPCVIISSSGMLTGGPSVFYAEKIVQSQN 339
Query: 352 SLLVLENEVDAE 363
+L+ + D E
Sbjct: 340 ALIAITGYQDEE 351
>gi|224108267|ref|XP_002314781.1| predicted protein [Populus trichocarpa]
gi|222863821|gb|EEF00952.1| predicted protein [Populus trichocarpa]
Length = 639
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 92/451 (20%), Positives = 160/451 (35%), Gaps = 97/451 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ T + G++ IY+T + LM+E+
Sbjct: 75 ALPYFTEVCGYNGPIYMTYPTKALAPLMLEDF---------------------------- 106
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RK+ + G E H+ C+ KV + + + L I+A+ +G
Sbjct: 107 ------RKVLVDRRGEEEQFTS---LHISQCMEKVIAVDLKQTVQVDDDLQIRAYYAGHV 157
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + + Y N D A Q L L L TE ++
Sbjct: 158 LGAAMFYAKVGDSAMVYTGDYNMTP----DRHLGAAQIDRLEL-----DLLITESTYATT 208
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D S Y E E L + C V GG VLIP +G +L
Sbjct: 209 IRD------------SKY---AREREFLKAVHEC----VAGGGKVLIPTFALGRAQELCI 249
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ + E +LK+PIY + + + Y + W ++ +E +A K
Sbjct: 250 LLDDYWERMNLKVPIYFSAGLTIQANLYYKILISWTSQKVKET-------YATRNAFDFK 302
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAEL 364
+H F + L+N PC++F+ + G ++ + ++W+ +L+ L A
Sbjct: 303 HVHNF-----DRSLINAPGPCVLFATPGMISGGFSLEVFKQWAPCEMNLITLPGYCVAGT 357
Query: 365 A---VLPFKP------------ISMKVLQCSFLSGKKLQKVQPLLKILQPK-LVLFPEEW 408
++ KP + ++ Q SF + + L K L P+ ++L E
Sbjct: 358 VGHKLMSGKPTKINLDKDTQIDVRCQIHQLSFSPHTDSKGIMDLTKFLSPRNVILVHGEK 417
Query: 409 RTHVSFSDV--TSFSVSHY--SENETIHIPS 435
VS + T + Y + + +HIPS
Sbjct: 418 PKMVSLKERIQTELRIPCYLPANCDAVHIPS 448
>gi|71661559|ref|XP_817799.1| cleavage and polyadenylation specificity factor [Trypanosoma cruzi
strain CL Brener]
gi|70883012|gb|EAN95948.1| cleavage and polyadenylation specificity factor, putative
[Trypanosoma cruzi]
Length = 625
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 114/281 (40%), Gaps = 50/281 (17%)
Query: 92 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 151
++ I K++T+ + EE NGI + F++G +GA +++ A Y +G
Sbjct: 15 LQSTIEKIETVEYHEEVTVNGIRF-QPFNAGHVLGAALFMVDIAGMKTLY-------TGD 66
Query: 152 AMDFDYRAIQGSDLILYS-DLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEME 210
R + G+++ YS D+ +ST I + E
Sbjct: 67 FSRVPDRHLLGAEVPSYSPDILIAESTNGIRELE----------------------SREE 104
Query: 211 KLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--LKIPIYIISSVAEE 268
+ + D VK GG L+P+ +G +LL + + E IPIY SS+A+
Sbjct: 105 RETLFTTWVHDVVKGGGRCLVPVFALGRAQELLLILEEYWEAHKELQHIPIYYASSLAQR 164
Query: 269 LLA-YTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQE--PC 325
+ Y + + +Q+ +P VF +HS ++++ PC
Sbjct: 165 CMKLYQTFVSAMNDRVKQQHANHRNPF-------------VFKYIHSLMETRSFEDTGPC 211
Query: 326 IVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 365
+V + L+ G ++ L RW GD N +++ VD +A
Sbjct: 212 VVLASPGMLQSGISLELFERWCGDRRNGIIIAGYCVDGTIA 252
>gi|302846726|ref|XP_002954899.1| hypothetical protein VOLCADRAFT_65253 [Volvox carteri f.
nagariensis]
gi|300259874|gb|EFJ44098.1| hypothetical protein VOLCADRAFT_65253 [Volvox carteri f.
nagariensis]
Length = 477
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 220 IDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEW 279
+++V AGG VLIP +G +LL I E + L++PIY S++A L Y + W
Sbjct: 247 VETVAAGGKVLIPTFAMGRAQELLMLITDCWERNGLQVPIYFSSAMAARALVYYQLLLNW 306
Query: 280 LCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPT 339
+F +V + IH +M P ++F+ ++ G
Sbjct: 307 TNANHIHC------VFVNVHICVCTHIHT-------TWMMLAPGPALLFASPGNIASGVA 353
Query: 340 IHLLRRWSGDHNSLLVLEN 358
+ R W+G +LLVL
Sbjct: 354 LEAFRSWAGSSKNLLVLAG 372
>gi|119576637|gb|EAW56233.1| cleavage and polyadenylation specific factor 3-like, isoform CRA_b
[Homo sapiens]
Length = 329
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 12/134 (8%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 280
++V+ GG VLIP+ +G +L + F E +LK+PIY + + E+ Y W
Sbjct: 205 ETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPW- 263
Query: 281 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 340
Q+ K F +F + K I F + + P +VF+ L G ++
Sbjct: 264 TNQKIRKTFVQRNMF------EFKHIKAF-----DRAFADNPGPMVVFATPGMLHAGQSL 312
Query: 341 HLLRRWSGDHNSLL 354
+ R+W+G+ +++
Sbjct: 313 QIFRKWAGNEKNMV 326
>gi|21703178|gb|AAM76086.1|AF483006_1 FLJ10871-like protein [Boltenia villosa]
Length = 202
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 320 NWQEPCIVFSPHWSLRLGPTIHLLRRW-SGDHNSLLVLENEVDAELAVLPFKPISMKVLQ 378
+++EPCIVF+ H SLR G +H + W NS++ +E A+ PF+P+ M+
Sbjct: 7 SFKEPCIVFAGHPSLRFGDAVHFVEMWRKSAANSIIFVEPNFPYLEALAPFQPMQMRAFH 66
Query: 379 CSFLSGKKLQKVQPLLKILQPKLVLFPEEW 408
+ LL LQ K V+ P +
Sbjct: 67 FEIDTRTNHTGSSMLLNDLQSKNVIVPASY 96
>gi|443694305|gb|ELT95478.1| hypothetical protein CAPTEDRAFT_151615 [Capitella teleta]
Length = 600
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 66/352 (18%), Positives = 126/352 (35%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+++ M GF IY+T I +++E+ YR+ E G E
Sbjct: 76 ALPYMSEMVGFDGPIYMTHPTKAICPILLED-------YRKI--TVERKG-------ETN 119
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
S + +K C+ K + + + L IKA+ +G
Sbjct: 120 FFTSEM---------------------IKSCMKKTIAMNLHQTIQVDDELEIKAYYAGHV 158
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA I + ++ Y N + + DL++ TE ++
Sbjct: 159 LGAAMIHIRVGEQSVVYTGDYNMTPDRHLGAAWIDRCRPDLLI---------TESTYATT 209
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D E ++ + V D+V GG VLIP+ +G +L
Sbjct: 210 IRDSKRCRER------DFLKKVH-------------DAVDKGGKVLIPVFALGRAQELCI 250
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ + + +LK+PIY + E+ Y W ++ + F + K
Sbjct: 251 LLETYWDRMNLKVPIYFSMGLTEKANHYYKMFITWTNQKIKNT-------FVQRNMFDFK 303
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F V++ + P +VF+ L G ++ + ++W G +++++
Sbjct: 304 HIKPFDKVYA-----DNPGPMVVFATPGMLHGGLSLQIFKKWCGGEKNMVIM 350
>gi|115479027|ref|NP_001063107.1| Os09g0397900 [Oryza sativa Japonica Group]
gi|50252615|dbj|BAD28786.1| putative FEG protein [Oryza sativa Japonica Group]
gi|113631340|dbj|BAF25021.1| Os09g0397900 [Oryza sativa Japonica Group]
gi|218202115|gb|EEC84542.1| hypothetical protein OsI_31281 [Oryza sativa Indica Group]
gi|222641522|gb|EEE69654.1| hypothetical protein OsJ_29268 [Oryza sativa Japonica Group]
Length = 559
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 93/463 (20%), Positives = 162/463 (34%), Gaps = 102/463 (22%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ T + G+ +Y+T + LM+E+ + +++R G EE +E++
Sbjct: 78 ALPYFTEVCGYHGPVYMTYPTKALAPLMLEDYRKVMVDHR---GEEEQ-----YSYEDI- 128
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
LR C+ KV L + + L I+A+ +G
Sbjct: 129 -----LR-----------------------CMRKVIPLDLKQTIQVDKDLSIRAYYAGHV 160
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA I Y N D A Q L L L TE +
Sbjct: 161 LGAAMIYAKVGDAAIVYTGDYNMTP----DRHLGAAQIDRLKL-----DLLITESTYAKT 211
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D + E E L + C V GG VLIP +G +L
Sbjct: 212 VRDSKH---------------AREREFLKAVHKC----VSGGGKVLIPAFALGRAQELCI 252
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKE 303
+ + E +LKIPIY + + + Y + W ++ + +P F HV
Sbjct: 253 LLDDYWERMNLKIPIYFSAGLTIQANMYYKMLIGWTSQKIKNSYTVHNPFDFKHV----- 307
Query: 304 KKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAE 363
H + +N PC++F+ + G ++ + ++W+ +L+ L A
Sbjct: 308 --------CHFERSFINNPGPCVLFATPGMISGGFSLEVFKKWAPSEKNLVTLPGYCVAG 359
Query: 364 L---AVLPFKP------------ISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEW 408
++ KP + ++ Q SF + + L + L P V+
Sbjct: 360 TIGHKLMSGKPTRIDIDKDTHIDVRCQIHQLSFSPHTDSKGIMDLTEFLSPSHVILVHGE 419
Query: 409 RTHVSF-----SDVTSFSVSHYSENETIHIPSLKESAELEIAA 446
+ ++F + + NET+ IP+ S L+I A
Sbjct: 420 KPQMAFLKERIESELGMQCCYPANNETVSIPT---SQNLKINA 459
>gi|407411604|gb|EKF33594.1| cleavage and polyadenylation specificity factor, putative
[Trypanosoma cruzi marinkellei]
Length = 763
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 114/281 (40%), Gaps = 50/281 (17%)
Query: 92 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 151
++ I K++T+ + EE NGI + F++G +GA +++ A Y +G
Sbjct: 153 LQSTIEKIETVEYHEEVTVNGIRF-QPFNAGHVLGAALFMVDIAGMKTLY-------TGD 204
Query: 152 AMDFDYRAIQGSDLILYS-DLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEME 210
R + G+++ YS D+ +ST I + E
Sbjct: 205 FSRVPDRHLLGAEVPSYSPDILIAESTNGIRELE----------------------SREE 242
Query: 211 KLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--LKIPIYIISSVAEE 268
+ + D VK GG L+P+ +G +LL + + E IPIY SS+A+
Sbjct: 243 RETLFTTWVHDVVKGGGRCLVPVFALGRAQELLLILEEYWEAHKELQHIPIYYASSLAQR 302
Query: 269 LLA-YTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQE--PC 325
+ Y + + +Q+ +P VF +HS ++++ PC
Sbjct: 303 CMKLYQTFVSAMNDRVKQQHANHRNPF-------------VFKYIHSLMETRSFEDTGPC 349
Query: 326 IVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 365
+V + L+ G ++ L RW GD N +++ VD +A
Sbjct: 350 VVLASPGMLQSGISLELFERWCGDRRNGIIIAGYCVDGTIA 390
>gi|405958713|gb|EKC24813.1| Integrator complex subunit 11 [Crassostrea gigas]
Length = 575
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 66/352 (18%), Positives = 129/352 (36%), Gaps = 77/352 (21%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+++ M G+ IY+T I +++E+
Sbjct: 49 ALPYMSEMVGYDGPIYMTHPTKAICPILLEDY---------------------------- 80
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
RKI + G E +K+C+ KV + E + L IKA+ +G
Sbjct: 81 ------RKITVERKGEE---NFFTSEMIKNCMKKVVVVNLHETKQVDEELEIKAYYAGHV 131
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + I + ++ Y N + + DL++ TE ++
Sbjct: 132 LGAAMFHIKVGQQSVVYTGDYNMTPDRHLGAAWIDKCRPDLLI---------TESTYATT 182
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D + E + L + C V+ GG VLIP+ +G +L
Sbjct: 183 IRDS---------------KRCRERDFLKKVHDC----VEKGGKVLIPVFALGRAQELCI 223
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
+ + + ++K+PIY + E+ Y W Q+ +K F +F K
Sbjct: 224 LLESYWDRMNIKVPIYFSLGLTEKANHYYKLFITW-TSQKIKKTFVQRNMFEF------K 276
Query: 305 KIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
I F + ++ P +VF+ L G ++ + ++W+ + +++++
Sbjct: 277 HIKPF-----DRAFIDNPGPMVVFATPGMLHAGLSLQIFKKWAPNELNMVIM 323
>gi|357440035|ref|XP_003590295.1| Cleavage and polyadenylation specificity factor subunit [Medicago
truncatula]
gi|355479343|gb|AES60546.1| Cleavage and polyadenylation specificity factor subunit [Medicago
truncatula]
Length = 630
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 57/299 (19%), Positives = 116/299 (38%), Gaps = 75/299 (25%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
+ + LP+ + G SA +Y TE R+G L M Y F ++ S
Sbjct: 66 LHLAALPYAIKHLGLSAPVYSTEPVYRLGLLTM---------YDHFLSRKQVSDFDLFTL 116
Query: 61 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
++++ + ++ ++ G G GI +I +
Sbjct: 117 DDIDSAFQTVTRLTYSQNHHLSGKG-------------------------EGI-VIAPHT 150
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRA---IQGSDLILYSDLSSLDST 177
+G +G W I+ ++ Y A+DF++R + G+ L + + L +
Sbjct: 151 AGHLLGGTIWKITKDGEDVIY----------AVDFNHRKERHLNGTVLGSFVRPAVLIT- 199
Query: 178 EDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVG 237
+ N+L+N ++ ++ I +++AGG+VL+P++ G
Sbjct: 200 ----------------DAYNALNNQPYRRQKDKEFGDILK---KTLRAGGNVLLPVDTAG 240
Query: 238 VFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLC-------KQRQEKLF 289
L+L+ + + +L PIY ++ VA + Y + EW+ +Q +E +F
Sbjct: 241 RILELILMLESYWADENLNYPIYFLTYVASSTIDYVKSFLEWMSDSIAKSFEQTRENIF 299
>gi|342180524|emb|CCC90000.1| putative cleavage and polyadenylation specificity factor subunit
[Trypanosoma congolense IL3000]
Length = 766
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 136/367 (37%), Gaps = 88/367 (23%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ F +I++T A +++M + + R AE+ +W++
Sbjct: 105 ALPYFCEQTAFKGRIFMTSATKAFYKMVMNDFL------RVGASAEDIVNNEWLQ----- 153
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
I K++T+ + EE NGI + F++G
Sbjct: 154 -----------------------------STIEKIETVEYHEEVTVNGIHF-QPFNAGHV 183
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS-DLSSLDSTEDIDQS 183
+GA +++ A + Y +G R + G+++ YS D+ +ST I +
Sbjct: 184 LGAALFMVDIAGMKVLY-------TGDFSRVPDRHLLGAEVPPYSPDILIAESTNGIREL 236
Query: 184 SFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLL 243
E+ + D VK GG LIP+ +G +LL
Sbjct: 237 E----------------------SREERETLFTTWVHDVVKGGGRCLIPVFALGRAQELL 274
Query: 244 EQIAIFMECSS--LKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLI 301
+ + E IPIY SS+A+ + T + + +E+ + F
Sbjct: 275 LILEEYWEAHKELQHIPIYYASSLAQRCMKLYQTFVSAMNDRVKEQHENHRNPF------ 328
Query: 302 KEKKIHVFPAVHSPKLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 358
VF + S ++++ PC+V + L+ G ++ L RW GD N ++V
Sbjct: 329 ------VFKYIQSLLDTRSFEDTGPCVVLASPGMLQSGISLELFERWCGDKRNGIIVAGY 382
Query: 359 EVDAELA 365
VD +A
Sbjct: 383 CVDGTIA 389
>gi|407851025|gb|EKG05159.1| cleavage and polyadenylation specificity factor, putative
[Trypanosoma cruzi]
Length = 762
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 114/281 (40%), Gaps = 50/281 (17%)
Query: 92 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 151
++ I K++T+ + EE NGI + F++G +GA +++ A Y +G
Sbjct: 152 LQSTIEKIETVEYHEEVTVNGIRF-QPFNAGHVLGAALFMVDIAGMKTLY-------TGD 203
Query: 152 AMDFDYRAIQGSDLILYS-DLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEME 210
R + G+++ YS D+ +ST I + E
Sbjct: 204 FSRVPDRHLLGAEVPSYSPDILIAESTNGIRELE----------------------SREE 241
Query: 211 KLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--LKIPIYIISSVAEE 268
+ + D VK GG L+P+ +G +LL + + E IPIY SS+A+
Sbjct: 242 RETLFTTWVHDVVKGGGRCLVPVFALGRAQELLLILEEYWEAHKELQHIPIYYASSLAQR 301
Query: 269 LLA-YTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQE--PC 325
+ Y + + +Q+ +P VF +HS ++++ PC
Sbjct: 302 CMKLYQTFVSAMNDRVKQQHANHRNPF-------------VFKYIHSLMETRSFEDTGPC 348
Query: 326 IVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 365
+V + L+ G ++ L RW GD N +++ VD +A
Sbjct: 349 VVLASPGMLQSGISLELFERWCGDRRNGIIIAGYCVDGTIA 389
>gi|50363261|gb|AAT75333.1| cleavage polyadenylation specificity factor CPSF73 [Trypanosoma
cruzi]
Length = 762
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 114/281 (40%), Gaps = 50/281 (17%)
Query: 92 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 151
++ I K++T+ + EE NGI + F++G +GA +++ A Y +G
Sbjct: 152 LQSTIEKIETVEYHEEVTVNGIRF-QPFNAGHVLGAALFMVDIAGMKTLY-------TGD 203
Query: 152 AMDFDYRAIQGSDLILYS-DLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEME 210
R + G+++ YS D+ +ST I + E
Sbjct: 204 FSRVPDRHLLGAEVPSYSPDILIAESTNGIRELE----------------------SREE 241
Query: 211 KLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--LKIPIYIISSVAEE 268
+ + D VK GG L+P+ +G +LL + + E IPIY SS+A+
Sbjct: 242 RETLFTTWVHDVVKGGGRCLVPVFALGRAQELLLILEEYWEAHKELQHIPIYYASSLAQR 301
Query: 269 LLA-YTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQE--PC 325
+ Y + + +Q+ +P VF +HS ++++ PC
Sbjct: 302 CMKLYQTFVSAMNDRVKQQHANHRNPF-------------VFKYIHSLMETRSFEDTGPC 348
Query: 326 IVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 365
+V + L+ G ++ L RW GD N +++ VD +A
Sbjct: 349 VVLASPGMLQSGISLELFERWCGDRRNGIIIAGYCVDGTIA 389
>gi|4220489|gb|AAD12712.1| putative cleavage and polyadenylation specifity factor [Arabidopsis
thaliana]
Length = 837
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 78/377 (20%), Positives = 135/377 (35%), Gaps = 75/377 (19%)
Query: 53 SGPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEAC 109
+GP +M + L P L R++ + G E H+ +C+ KV + +
Sbjct: 86 NGPIYMSYPTKALSPLMLEDYRRVMVDRRGEE---ELFTTTHIANCMKKVIAIDLKQTIQ 142
Query: 110 YNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS 169
+ L I+A+ +G +GA I Y N + +
Sbjct: 143 VDEDLQIRAYYAGHVLGAVMVYAKMGDAAIVYTGDYNMTTDRHL---------------- 186
Query: 170 DLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVE------EMEKLAFICSCAIDSV 223
ID+ +L+ S S Y ++ E E L + C V
Sbjct: 187 ------GAAKIDRLQL--------DLLISESTYATTIRGSKYPREREFLQAVHKC----V 228
Query: 224 KAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQ 283
GG LIP +G +L + + E ++K+PIY S + + Y + W +
Sbjct: 229 AGGGKALIPSFALGRAQELCMLLDDYWERMNIKVPIYFSSGLTIQANMYYKMLISWTSQN 288
Query: 284 RQEKLFSGDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHL 342
+EK + +P F +VK IH P PC++F+ L G ++ +
Sbjct: 289 VKEKHNTHNPFDFKNVKDFDRSLIHA-PG------------PCVLFATPGMLCAGFSLEV 335
Query: 343 LRRWSGDHNSLLVLENEVDAELA---VLPFKPISM------------KVLQCSFLSGKKL 387
+ W+ +L+ L A ++ KP ++ KV Q +F
Sbjct: 336 FKHWAPSPLNLVALPGYSVAGTVGHKLMAGKPTTVDLYNGTKVDVRCKVHQVAFSPHTDA 395
Query: 388 QKVQPLLKILQPKLVLF 404
+ + L K L PK V+
Sbjct: 396 KGIMDLTKFLSPKNVVL 412
>gi|268552491|ref|XP_002634228.1| Hypothetical protein CBG01798 [Caenorhabditis briggsae]
Length = 722
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 97/510 (19%), Positives = 191/510 (37%), Gaps = 101/510 (19%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+L + F K ++T A I ++++ + + ++ ++ GA+ + Q ++LE
Sbjct: 78 ALPWLLQKTAFRGKCFMTHATKAIYRMLLGDYVRIS----KYGGADRN---QLYTEDDLE 130
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
++K++T+ F E+ NGI + +G
Sbjct: 131 -----------------------------KSMAKIETIDFREQKEVNGIRFW-PYVAGHV 160
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GAC ++I A + Y D+ ++ L +++ + I +S+
Sbjct: 161 LGACQFMIEIAGVRVLYTG------------DFSCLEDRHLCA-AEIPPVSPQVLITEST 207
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
+ + ++ D SV E + D V GG LIP +G +L+
Sbjct: 208 YG-----------TQTHEDRSVREKRFTQMVH----DIVTRGGRCLIPAFAIGPAQELML 252
Query: 245 QIAIFMECSS--LKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDP-LFAHVKLI 301
+ + E IP+Y SS+A++ ++ T + + Q+++ +P +F HV +
Sbjct: 253 ILDEYWEAHQELHDIPVYYASSLAKKCMSVYQTFVNGMNSRIQKQIAIKNPFIFKHVSTL 312
Query: 302 KEKKIHVFPAVHSPKLLMNWQE---PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLE 357
+ M+ E PC+V + L+ G + L W D N ++
Sbjct: 313 RG---------------MDQFEDAGPCVVLATPGMLQSGFSRELFENWCSDSKNGCIIAG 357
Query: 358 NEVDAELAVLPFK-------------PISMKVLQCSFLSGKKLQKVQPLLKILQP-KLVL 403
V+ LA P+ M+V SF + + +K L+P LVL
Sbjct: 358 YCVEGTLAKHILTEPEEIVSLSGEKLPMRMQVGYVSFSAHTDFNQTSNFVKTLKPPHLVL 417
Query: 404 FPEEWRTHVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAADIASKFQWRMLKQKKLN 463
E + +H P E EL+ + +K ++ ++ N
Sbjct: 418 VHGELHEMSRLKAGIERLFQDINIPIEVHNPRNTERLELQFRGEKTAKVIGKLAERMPEN 477
Query: 464 ITRLKGRLFVNHGKHQLLPENEPGGSSQTR 493
+ G L N+ + L+ ++E G + R
Sbjct: 478 NKIISGVLVKNNFSYSLMAKDELGSYTSLR 507
>gi|358060736|dbj|GAA93507.1| hypothetical protein E5Q_00148 [Mixia osmundae IAM 14324]
Length = 1378
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 115/278 (41%), Gaps = 27/278 (9%)
Query: 223 VKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--LKIPIYIISSVAEELLAYTNTIPEWL 280
+K GG VL+P GV +LL + F E + + PIY ++S+A +L
Sbjct: 272 LKRGGKVLLPAFSSGVSQELLLVLDDFWEKNPDLHEFPIYYVTSLASRVLKVYRQHISSQ 331
Query: 281 CKQRQEKLFSGD-PL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGP 338
++ Q++ SGD P F + +KE + S + + + PC+V + L+ G
Sbjct: 332 SQKIQQRAASGDNPYDFGKGRFVKE--------LRSIRRGVADKSPCVVVATPGMLQPGT 383
Query: 339 TIHLLRRWSGDHNSLLVL-----ENEVDAELAVLPFK---------PISMKVLQCSFLSG 384
+ LL RW+GD + L+L E + +L P + P + V SF
Sbjct: 384 SRELLERWAGDRRNGLILCGYSVEGSLARDLQAEPDEFMSVEGRRIPRRISVDVISFAQH 443
Query: 385 KKLQKVQPLLKILQP-KLVLFPEEWRTHVSFSDVTSFSVSHYSENETIHIPSLKESAELE 443
+ + ++P L+L E R + + + ++ P + ++
Sbjct: 444 VDFSQNASFIDAVRPANLILVHGEARNVTTLQAALQKIYADKKDEMKVYAPRNLQPIKIR 503
Query: 444 IAADIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQLL 481
IA + ++ + K+ + + G LFV ++ LL
Sbjct: 504 IARNQVARAVGGLAKEHLPDGAPVGGLLFVKDAQYTLL 541
>gi|344996811|ref|YP_004799154.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor
lactoaceticus 6A]
gi|343965030|gb|AEM74177.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor
lactoaceticus 6A]
Length = 822
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 131/312 (41%), Gaps = 65/312 (20%)
Query: 65 LLPSALRKIALGEDGSELGGGCPCIA--HVKDCISKVQTLRFGEEACYNGILIIKA--FS 120
LL +LR + + ED P A +V+D + + TL +G + I IK F
Sbjct: 92 LLYDSLRIMEIAEDE------IPIYAEKNVEDLLDR--TLTYGFNYTFEPIEGIKVTFFP 143
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQG--SDLILYSDLSSLDSTE 178
+G +GA I +G+I Y +F++ + D ++ D++
Sbjct: 144 AGHILGASMIFIKTQEGSILYTG--DFSADRQLTVDKASVPKIRPDVV------------ 189
Query: 179 DIDQSSFSD---DNNNWEE--LMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPI 233
I +S++ D N ++EE L N+++ + V GG VLIP
Sbjct: 190 -ICESTYGDRLHTNRSFEEERLFNTVA--------------------EVVSQGGKVLIPA 228
Query: 234 NRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDP 293
+G +++ + +M+ + ++I V E + Y N P +L + +++ G+
Sbjct: 229 FAIGRAQEIILILRNYMKKRKVSFNVFIDGMVREVIRVYRNN-PTYLSSRYYKRVLKGEE 287
Query: 294 LF--AHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHN 351
+F ++ ++ +KK + +++ +PC++ S L GP++ + N
Sbjct: 288 IFLADNINVVSDKK--------QREEIVSSSDPCVIISSSGMLTGGPSVFYAEKIVQSQN 339
Query: 352 SLLVLENEVDAE 363
+L+ + D E
Sbjct: 340 ALIAITGYQDEE 351
>gi|281201684|gb|EFA75892.1| integrator complex subunit 11 [Polysphondylium pallidum PN500]
Length = 648
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 97/481 (20%), Positives = 183/481 (38%), Gaps = 85/481 (17%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ T + G+ IY+T + + LI +++ Y+ Y + + Q ++
Sbjct: 75 ALPYFTEICGYDGPIYMT--------VCYKCLISISI-YKYNYNSL-TFMLQLIQLPTKA 124
Query: 65 LLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS 121
++P L RKI + G E P +KDC+ KV + + + L IK + +
Sbjct: 125 IVPILLEDYRKIVVDRKG-ETNFFTP--QMIKDCMKKVIPVALHQTIDVDDELSIKPYYA 181
Query: 122 GLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDID 181
G +GA + + ++ Y N + + L++ TE
Sbjct: 182 GHVLGAAMFYCKVGEESVVYTGDYNMTPDRHLGSAWIDAVNPTLLI---------TETTY 232
Query: 182 QSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQ 241
++ D E + L E VE+ GG VLIP+ +G +
Sbjct: 233 ATTIRDSKRGRER--DFLKRVHECVEK-----------------GGKVLIPVFALGRVQE 273
Query: 242 LLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL-FAHVKL 300
L I + E L +PIY +AE+ Y W ++ ++ + F H+K
Sbjct: 274 LCILIDTYWEQMGLSVPIYFSEGLAEKANFYYKLFIGWTNQKIKQTFVKRNMFDFKHIKP 333
Query: 301 IKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLV----- 355
++L++ P ++F+ L G ++ + ++W+ ++ +
Sbjct: 334 FD-------------RMLVDAPGPMVLFATPGMLHAGASLEVFKKWAPSELNMTIIPGYC 380
Query: 356 ---------LENEVDAELAVLPFKP---ISMKVLQCSFLSGKKLQKVQPLLKILQPKLVL 403
L N ++ + K + K+ SF + + + L+K+ QPK VL
Sbjct: 381 VVGTVGNKLLSNASGPQMVEIDKKTTLEVKCKIHNLSFSAHADAKGIMQLIKMSQPKNVL 440
Query: 404 FPEEWRTHVSF-SDVTS--FSVSHY--SENETIHIPSLKESAELEIAADIASKFQWRMLK 458
+ + F SD S F++ Y + T++I S K I DI+ K R +
Sbjct: 441 LVHGEKEKMRFLSDKISKDFNIPCYFPANGVTVNIESSK-----SIPIDISLKLLKRQIS 495
Query: 459 Q 459
+
Sbjct: 496 E 496
>gi|126458658|ref|YP_001054936.1| beta-lactamase domain-containing protein [Pyrobaculum calidifontis
JCM 11548]
gi|126248379|gb|ABO07470.1| beta-lactamase domain protein [Pyrobaculum calidifontis JCM 11548]
Length = 634
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEW 279
++V GG VLIP G ++L + ME + ++PIY+ + E L Y P +
Sbjct: 393 ETVAKGGKVLIPAFSTGRGQEILYILNKMMEGGLIPRVPIYVDGMIVETLNVYL-MYPHY 451
Query: 280 LCKQRQEKLFSGDPLF--AHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLG 337
L + E+++SG F + +I ++ V ++ + +EP ++ +PH L G
Sbjct: 452 LNPEVAEEIYSGVNPFTTSGAVVIVDRAKRVEDRINQVAKIAQSEEPAVIIAPHGMLNGG 511
Query: 338 PTIHLLRRWSGDHNSLLVL 356
P + + + D + L+
Sbjct: 512 PILDYFAQLAPDERNKLIF 530
>gi|289191606|ref|YP_003457547.1| RNA-metabolising metallo-beta-lactamase [Methanocaldococcus sp.
FS406-22]
gi|288938056|gb|ADC68811.1| RNA-metabolising metallo-beta-lactamase [Methanocaldococcus sp.
FS406-22]
Length = 421
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 98/213 (46%), Gaps = 35/213 (16%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEW 279
++++ GG V+IP+ +G ++L I +M LK +PIY S+ Y + I W
Sbjct: 204 ETIENGGKVIIPVFAIGRAQEILLIINNYMRSGGLKEVPIYTDGSLIHATAVYMSYI-NW 262
Query: 280 LCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP--KLLMNWQEPCIVFSPHWSLRLG 337
L + +K + E +I+ F + L+ N +EPCI+ S ++ G
Sbjct: 263 LNPK--------------IKNMVENRINPFGEIKKADENLVFN-KEPCIIVSTSGMVQGG 307
Query: 338 PTIHLLRRWSGDHNSLLVLENEVDAELA---------VLPFK---PISMKVLQCSFLS-G 384
P + L+ N L++ + + L + PFK PI KV++ F + G
Sbjct: 308 PVLKYLKLLKDPKNKLILTGYQAEGTLGRELEEGAKEIQPFKNKIPIRGKVVKIEFSAHG 367
Query: 385 KKLQKVQPLLKILQPK--LVLFPEEWRTHVSFS 415
V+ + KI +P+ +V+ E +++ +SF+
Sbjct: 368 DYNSLVRYIKKIPKPEKAIVMHGERYQS-LSFA 399
>gi|124505029|ref|XP_001351256.1| cleavage and polyadenylation specificity factor protein, putative
[Plasmodium falciparum 3D7]
gi|3758842|emb|CAB11127.1| cleavage and polyadenylation specificity factor protein, putative
[Plasmodium falciparum 3D7]
Length = 1017
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 151/379 (39%), Gaps = 85/379 (22%)
Query: 58 MKWEELELLPSALRKIALGEDGSE--LGGGCPCIA---------HVKDCISKVQTLRFGE 106
MKWE+ + R+I + + S+ L CI ++ +CI KV L+ E
Sbjct: 222 MKWEK----KNFERQIKMLNEKSDELLNYNINCIKKDPWNINEDNIYNCIDKVIGLQINE 277
Query: 107 EACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLI 166
G + I + +G +GAC + I ++ Y DY I L
Sbjct: 278 TFEL-GDMSITPYYAGHVLGACIYKIEVRNFSVIYTG------------DYNTIPDKHL- 323
Query: 167 LYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAG 226
+++ SL+ I +S+++ Y ++ +L +C+ + V G
Sbjct: 324 GSANIPSLNPEIFISESTYA--------------TYVRPTKKASELE-LCNLVHECVHKG 368
Query: 227 GSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL---C-K 282
G VLIP+ +G +L + + + + PIY + E Y W+ C
Sbjct: 369 GKVLIPVFAIGRAQELSILLDDYWKKMKIHYPIYFGCGLTENANKYYKIYSSWINSSCMS 428
Query: 283 QRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKL--LMNWQEPCIVFSPHWSLRLGPTI 340
+E LF FA++ SP L +N + P ++F+ L G ++
Sbjct: 429 NEKENLFD----FANI---------------SPFLNNYLNEKRPMVLFATPGMLHTGLSL 469
Query: 341 HLLRRWSGDHNSLLVL-----ENEVDAELAVLPFKPISM----------KVLQCSFLSGK 385
+ W+G+ +L+VL + V +L ++ K IS+ K++ SF +
Sbjct: 470 KAFKAWAGNPQNLIVLPGYCVQGTVGHKL-IMGEKQISLDGTTYIKVLCKIIYLSFSAHA 528
Query: 386 KLQKVQPLLKILQPKLVLF 404
+Q L+K + PK V+F
Sbjct: 529 DSNGIQQLIKHVSPKNVIF 547
>gi|19074744|ref|NP_586250.1| similarity to HYPOTHETICAL PROTEIN YO47_METJA [Encephalitozoon
cuniculi GB-M1]
gi|19069386|emb|CAD25854.1| similarity to HYPOTHETICAL PROTEIN YO47_METJA [Encephalitozoon
cuniculi GB-M1]
gi|449329879|gb|AGE96147.1| hypothetical protein ECU10_1350 [Encephalitozoon cuniculi]
Length = 496
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 116/308 (37%), Gaps = 52/308 (16%)
Query: 54 GPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACY 110
GP +M E+ P L RKI G+ S + +C+ KV T+ E +
Sbjct: 85 GPIYMTLPTKEVCPVLLDDFRKIVAGKGDSIF-----TYQDISNCMKKVVTISMNETYKH 139
Query: 111 NGILIIKAFSSGLDIGACNWIISGAKGNIAYISG-SNFASGHAMDFDYRAIQGSDLILYS 169
+ I + +G +GA + + ++ Y S H + I+ LI S
Sbjct: 140 DEDFYITPYYAGHVLGAAMFHVVVGDQSVVYTGDYSTTPDKHLGPASIKCIRPDLLITES 199
Query: 170 DLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSV 229
S+ T D + V+E E L + C V GG V
Sbjct: 200 TYGSI--TRDCRK-----------------------VKEREFLKAVSDC----VARGGRV 230
Query: 230 LIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLF 289
LIPI +G +L + + E + LK P+Y S + E+ + + ++K+F
Sbjct: 231 LIPIFALGRAQELCLLLDGYWERTGLKTPVYFSSGLTEKANEIYKKFISYTNETVRKKIF 290
Query: 290 SGDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSG 348
+ + H+K + + M + P ++F+ L G ++ + + W
Sbjct: 291 ERNMFEYKHIKPFQ-------------RHYMESKGPMVLFASPGMLHSGMSLKIFKEWCE 337
Query: 349 DHNSLLVL 356
D +L+++
Sbjct: 338 DEKNLVII 345
>gi|403337788|gb|EJY68117.1| Integrator complex subunit 11 [Oxytricha trifallax]
Length = 771
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 50/268 (18%), Positives = 103/268 (38%), Gaps = 45/268 (16%)
Query: 92 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 151
+K CI+K+ T++ E G + + A+ +G +GAC + + ++ Y N +
Sbjct: 143 IKACIAKISTIQLHETQVIKGDIKVTAYYAGHVLGACMFYVECNGESVVYTGDYNMTADR 202
Query: 152 AMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEK 211
+ + D+ + TE ++ D + E E K
Sbjct: 203 HLGAAWIDKLRPDVCI---------TETTYATTIRDSKRSRER-------------EFLK 240
Query: 212 LAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLA 271
+ +++ GG VLIP+ +G +L + + ++L+ PIY + E+
Sbjct: 241 VVH------ETLDNGGKVLIPVFALGRAQELCVLLETYWNRTNLQYPIYFSGGLTEKANF 294
Query: 272 YTNTIPEWLCKQRQEKLFSGDP---LFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVF 328
Y W ++ +K F+ + F HVK + I +P + F
Sbjct: 295 YYKLFINW-TNEKIKKTFTKNQNMFQFQHVKTLDTASI-------------KSDQPMVCF 340
Query: 329 SPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
+ L G ++ + + W+G + L++
Sbjct: 341 ASPGMLHGGYSLQIFKDWAGQEKNTLII 368
>gi|18312205|ref|NP_558872.1| mRNA 3'-end processing factor [Pyrobaculum aerophilum str. IM2]
gi|18159643|gb|AAL63054.1| mRNA 3'-end processing factor, conjectural [Pyrobaculum aerophilum
str. IM2]
Length = 634
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEW 279
D+V GG VLIP G ++L + ME + ++P+Y+ + E L Y P +
Sbjct: 393 DAVTRGGKVLIPAFSTGRGQEILYILNKMMEGGLIPRVPVYVDGMIVETLNVYL-MYPHY 451
Query: 280 LCKQRQEKLFSGDPLFAHVK--LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLG 337
L + E+++ G F +I ++ V ++ + +EP ++ +PH L G
Sbjct: 452 LNPEVAEEIYGGVNPFTTSGSVVIVDRAKRVEDRINQVAKIAQSEEPAVIIAPHGMLNGG 511
Query: 338 PTIHLLRRWSGDHNSLLVL 356
P + + + D + L+
Sbjct: 512 PVVDYFAQLAHDERNKLIF 530
>gi|297814408|ref|XP_002875087.1| hypothetical protein ARALYDRAFT_322516 [Arabidopsis lyrata subsp.
lyrata]
gi|297320925|gb|EFH51346.1| hypothetical protein ARALYDRAFT_322516 [Arabidopsis lyrata subsp.
lyrata]
Length = 819
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 77/377 (20%), Positives = 136/377 (36%), Gaps = 75/377 (19%)
Query: 53 SGPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEAC 109
+GP +M + L P L R++ + G + AH+ +C+ KV + +
Sbjct: 86 NGPIYMSYPTKALSPLMLEDYRRVMVDRRGED---ELFTTAHIANCMKKVIAIDLKQTIQ 142
Query: 110 YNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS 169
+ L I+A+ +G +GA I Y N + +
Sbjct: 143 VDEDLQIRAYYAGHVLGAVMVYAKVGDAAIVYTGDYNMTTDRHL---------------- 186
Query: 170 DLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVE------EMEKLAFICSCAIDSV 223
ID+ +L+ S S Y ++ E E L + C V
Sbjct: 187 ------GAAKIDRLQL--------DLLISESTYATTIRGSKYPREREFLQAVHKC----V 228
Query: 224 KAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQ 283
GG LIP +G +L + + E ++K+PIY S + + Y + W +
Sbjct: 229 AGGGKALIPSFALGRAQELCMLLDDYWERMNIKVPIYFSSGLTIQANMYYKMLISWTSQN 288
Query: 284 RQEKLFSGDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHL 342
+EK + +P F +VK IH P PC++F+ L G ++ +
Sbjct: 289 VKEKHNTHNPFDFKNVKDFDRSLIHA-PG------------PCVLFATPGMLCAGFSLEV 335
Query: 343 LRRWSGDHNSLLVLENEVDAELA---VLPFKPISM------------KVLQCSFLSGKKL 387
+ W+ +L+ L A ++ KP ++ K+ Q +F
Sbjct: 336 FKHWAPSPLNLVALPGYSVAGTVGHKLMSGKPTTVDLYNGTKVDVRCKIHQVAFSPHTDA 395
Query: 388 QKVQPLLKILQPKLVLF 404
+ + L K L PK V+
Sbjct: 396 KGIMDLTKFLSPKNVVL 412
>gi|146099573|ref|XP_001468678.1| putative cleavage and polyadenylation specificity factor
[Leishmania infantum JPCM5]
gi|134073046|emb|CAM71766.1| putative cleavage and polyadenylation specificity factor
[Leishmania infantum JPCM5]
Length = 756
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 72/368 (19%), Positives = 137/368 (37%), Gaps = 90/368 (24%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ F +I++T A +++M + + R GA + +W++
Sbjct: 93 ALPYFCNQTSFKGRIFMTSATKAFYKMVMNDFL------RIGAGASDLVTSEWLQ----- 141
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
I +++T+ + EE NGI + F++G
Sbjct: 142 -----------------------------STIDRIETVEYHEEVTVNGI-SFQPFNAGHV 171
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS-DLSSLDSTEDIDQS 183
+GA +++ A Y +G R + G+++ YS D+ +ST I +
Sbjct: 172 LGAAMFMVDIAGMRALY-------TGDFSRVPDRHLLGAEVPPYSPDILIAESTNGIREL 224
Query: 184 SFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLL 243
++ + S D V+ GG L+P+ +G +LL
Sbjct: 225 ESREEREH----------------------LFTSSVHDVVRRGGRCLVPVFALGRAQELL 262
Query: 244 EQIAIFMECSS--LKIPIYIISSVAEELLA-YTNTIPEWLCKQRQEKLFSGDPLFAHVKL 300
+ F + IPIY SS+A+ + Y + + +Q+ +P
Sbjct: 263 LILEEFWDAHKELQNIPIYYASSLAQRCMKLYQTFVSAMNDRVKQQHANHHNPF------ 316
Query: 301 IKEKKIHVFPAVHSPKLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLE 357
VF +HS ++++ PC+V + L+ G ++ L RW GD N +++
Sbjct: 317 -------VFKYIHSLMDTKSFEDNGPCVVLASPGMLQSGISLELFERWCGDRRNGIIMAG 369
Query: 358 NEVDAELA 365
VD +A
Sbjct: 370 YCVDGTIA 377
>gi|398022636|ref|XP_003864480.1| cleavage and polyadenylation specificity factor, putative
[Leishmania donovani]
gi|322502715|emb|CBZ37798.1| cleavage and polyadenylation specificity factor, putative
[Leishmania donovani]
Length = 756
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 72/368 (19%), Positives = 137/368 (37%), Gaps = 90/368 (24%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ F +I++T A +++M + + R GA + +W++
Sbjct: 93 ALPYFCNQTSFKGRIFMTSATKAFYKMVMNDFL------RIGAGASDLVTSEWLQ----- 141
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
I +++T+ + EE NGI + F++G
Sbjct: 142 -----------------------------STIDRIETVEYHEEVTVNGI-SFQPFNAGHV 171
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS-DLSSLDSTEDIDQS 183
+GA +++ A Y +G R + G+++ YS D+ +ST I +
Sbjct: 172 LGAAMFMVDIAGMRALY-------TGDFSRVPDRHLLGAEVPPYSPDILIAESTNGIREL 224
Query: 184 SFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLL 243
++ + S D V+ GG L+P+ +G +LL
Sbjct: 225 ESREEREH----------------------LFTSSVHDVVRRGGRCLVPVFALGRAQELL 262
Query: 244 EQIAIFMECSS--LKIPIYIISSVAEELLA-YTNTIPEWLCKQRQEKLFSGDPLFAHVKL 300
+ F + IPIY SS+A+ + Y + + +Q+ +P
Sbjct: 263 LILEEFWDAHKELQNIPIYYASSLAQRCMKLYQTFVSAMNDRVKQQHANHHNPF------ 316
Query: 301 IKEKKIHVFPAVHSPKLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLE 357
VF +HS ++++ PC+V + L+ G ++ L RW GD N +++
Sbjct: 317 -------VFKYIHSLMDTKSFEDNGPCVVLASPGMLQSGISLELFERWCGDRRNGIIMAG 369
Query: 358 NEVDAELA 365
VD +A
Sbjct: 370 YCVDGTIA 377
>gi|315426611|dbj|BAJ48239.1| beta-lactamase domain protein [Candidatus Caldiarchaeum
subterraneum]
Length = 635
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Query: 213 AFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQI-AIFMECSSLKIPIYIISSVAEELLA 271
A + ++ GG V+IP+ +G +++ + +F E ++ P+++ V E
Sbjct: 393 ALLAEKITATINRGGKVIIPVPAIGRAQEIMLVLNKLFTEKKLVETPVFLDGLVIEATAI 452
Query: 272 YTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPH 331
+T P++ + Q++L G+ +F K + ++ +EP +V S
Sbjct: 453 HTG-FPDYFTAELQQRLREGENIFLSEYFTPVK------GESQRQEILEMREPMVVISTS 505
Query: 332 WSLRLGPTIHLLRRWSGDHNSLLVL 356
L GP + L+ + GD N+LL+
Sbjct: 506 GMLEGGPVLKYLKAFGGDENNLLLF 530
>gi|312792978|ref|YP_004025901.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180118|gb|ADQ40288.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 822
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 131/312 (41%), Gaps = 65/312 (20%)
Query: 65 LLPSALRKIALGEDGSELGGGCPCIA--HVKDCISKVQTLRFGEEACYNGILIIKA--FS 120
LL +LR + + ED P A +V+D + + TL +G + I IK F
Sbjct: 92 LLYDSLRIMEIAEDE------IPIYAEKNVEDLLDR--TLTYGFNYTFEPIEGIKVTFFP 143
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQG--SDLILYSDLSSLDSTE 178
+G +GA I +G+I Y +F++ + D ++ D++
Sbjct: 144 AGHILGASMIFIQTQEGSILYTG--DFSADRQLTVDKASVPKIRPDVV------------ 189
Query: 179 DIDQSSFSD---DNNNWEE--LMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPI 233
I +S++ D N ++EE L N+++ + V GG VLIP
Sbjct: 190 -ICESTYGDRLHTNRSFEEERLFNTVA--------------------EVVSQGGKVLIPA 228
Query: 234 NRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDP 293
+G +++ + +M+ + ++I V E + Y N P +L + +++ G+
Sbjct: 229 FAIGRAQEIILILRNYMKKRKVSFNVFIDGMVREVIRVYRNN-PTYLSSRYYKRVLKGEE 287
Query: 294 LF--AHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHN 351
+F ++ ++ +KK + +++ +PC++ S L GP++ + N
Sbjct: 288 IFLADNINVVSDKK--------QREEIVSSSDPCVIISSSGMLTGGPSVFYAEKIVQSQN 339
Query: 352 SLLVLENEVDAE 363
+L+ + D E
Sbjct: 340 ALIAITGYQDEE 351
>gi|156096737|ref|XP_001614402.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148803276|gb|EDL44675.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 879
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 81/175 (46%), Gaps = 24/175 (13%)
Query: 210 EKLAFICSCAIDSVKAGGSVLIPIN-RVGVFLQLLEQIAIFME---CSSLKIPIYIISSV 265
+ L ICS + ++K+ G VLIP++ FL+L+E I + + ++ I+ I
Sbjct: 385 DSLNKICSIVLRTIKSKGCVLIPVDLHFLYFLELIELIGVVISKYLAKEEQVLIFTIIGN 444
Query: 266 AEELLAYTNTIPEWLCKQRQEKL---------FSGDPLFAHVKLIKEKKIHVFPAVHSPK 316
++ + EW+ + R++K FS + + + +LI I+
Sbjct: 445 ISNVIHQADLCAEWVEESRKKKCSKVSNPQGPFSIEIMIKNNRLITGNDIND-------- 496
Query: 317 LLMNW-QEPCIVFSPHWSLRLGPTIHLLRRWS-GDHNSLLVLENEVDAELAVLPF 369
+ W + PC+ F SLR + LL +W+ ++NSLL+++ D + PF
Sbjct: 497 -IAKWFRYPCVCFVQDSSLRFFESSTLLEKWAMEENNSLLLIDPYYDPVSVLAPF 550
>gi|315426553|dbj|BAJ48183.1| beta-lactamase domain protein [Candidatus Caldiarchaeum
subterraneum]
gi|343485301|dbj|BAJ50955.1| beta-lactamase domain protein [Candidatus Caldiarchaeum
subterraneum]
Length = 635
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Query: 213 AFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQI-AIFMECSSLKIPIYIISSVAEELLA 271
A + ++ GG V+IP+ +G +++ + +F E ++ P+++ V E
Sbjct: 393 ALLAEKITATINRGGKVIIPVPAIGRAQEIMLVLNKLFTEKKLVETPVFLDGLVIEATAI 452
Query: 272 YTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPH 331
+T P++ + Q++L G+ +F K + ++ +EP +V S
Sbjct: 453 HTG-FPDYFTAELQQRLREGENIFLSEYFTPVK------GESQRQEILEMREPMVVISTS 505
Query: 332 WSLRLGPTIHLLRRWSGDHNSLLVL 356
L GP + L+ + GD N+LL+
Sbjct: 506 GMLEGGPVLKYLKAFGGDENNLLLF 530
>gi|315425373|dbj|BAJ47039.1| mRNA 3'-end processing factor [Candidatus Caldiarchaeum
subterraneum]
Length = 638
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Query: 213 AFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQI-AIFMECSSLKIPIYIISSVAEELLA 271
A + ++ GG V+IP+ +G +++ + +F E ++ P+++ V E
Sbjct: 396 ALLAEKITATINRGGKVIIPVPAIGRAQEIMLVLNKLFTEKKLVETPVFLDGLVIEATAI 455
Query: 272 YTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPH 331
+T P++ + Q++L G+ +F K + ++ +EP +V S
Sbjct: 456 HTG-FPDYFTAELQQRLREGENIFLSEYFTPVK------GESQRQEILEMREPMVVISTS 508
Query: 332 WSLRLGPTIHLLRRWSGDHNSLLVL 356
L GP + L+ + GD N+LL+
Sbjct: 509 GMLEGGPVLKYLKAFGGDENNLLLF 533
>gi|30677952|ref|NP_178282.2| cleavage and polyadenylation specificity factor subunit 3-II
[Arabidopsis thaliana]
gi|332278175|sp|Q8GUU3.2|CPS3B_ARATH RecName: Full=Cleavage and polyadenylation specificity factor
subunit 3-II; AltName: Full=Cleavage and polyadenylation
specificity factor 73 kDa subunit II; Short=AtCPSF73-II;
Short=CPSF 73 kDa subunit II; AltName: Full=Protein
EMBRYO SAC DEVELOPMENT ARREST 26
gi|62320470|dbj|BAD94982.1| putative cleavage and polyadenylation specifity factor [Arabidopsis
thaliana]
gi|330250395|gb|AEC05489.1| cleavage and polyadenylation specificity factor subunit 3-II
[Arabidopsis thaliana]
Length = 613
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 78/377 (20%), Positives = 135/377 (35%), Gaps = 75/377 (19%)
Query: 53 SGPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEAC 109
+GP +M + L P L R++ + G E H+ +C+ KV + +
Sbjct: 86 NGPIYMSYPTKALSPLMLEDYRRVMVDRRGEE---ELFTTTHIANCMKKVIAIDLKQTIQ 142
Query: 110 YNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS 169
+ L I+A+ +G +GA I Y N + +
Sbjct: 143 VDEDLQIRAYYAGHVLGAVMVYAKMGDAAIVYTGDYNMTTDRHL---------------- 186
Query: 170 DLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVE------EMEKLAFICSCAIDSV 223
ID+ +L+ S S Y ++ E E L + C V
Sbjct: 187 ------GAAKIDRLQL--------DLLISESTYATTIRGSKYPREREFLQAVHKC----V 228
Query: 224 KAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQ 283
GG LIP +G +L + + E ++K+PIY S + + Y + W +
Sbjct: 229 AGGGKALIPSFALGRAQELCMLLDDYWERMNIKVPIYFSSGLTIQANMYYKMLISWTSQN 288
Query: 284 RQEKLFSGDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHL 342
+EK + +P F +VK IH P PC++F+ L G ++ +
Sbjct: 289 VKEKHNTHNPFDFKNVKDFDRSLIHA-PG------------PCVLFATPGMLCAGFSLEV 335
Query: 343 LRRWSGDHNSLLVLENEVDAELA---VLPFKPISM------------KVLQCSFLSGKKL 387
+ W+ +L+ L A ++ KP ++ KV Q +F
Sbjct: 336 FKHWAPSPLNLVALPGYSVAGTVGHKLMAGKPTTVDLYNGTKVDVRCKVHQVAFSPHTDA 395
Query: 388 QKVQPLLKILQPKLVLF 404
+ + L K L PK V+
Sbjct: 396 KGIMDLTKFLSPKNVVL 412
>gi|424814262|ref|ZP_18239440.1| putative metal-dependent Rnase [Candidatus Nanosalina sp. J07AB43]
gi|339757878|gb|EGQ43135.1| putative metal-dependent Rnase [Candidatus Nanosalina sp. J07AB43]
Length = 544
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 114/290 (39%), Gaps = 46/290 (15%)
Query: 83 GGGCPC-IAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGA--CNWIISGAKGNI 139
GG P +H+K + + T FGE + + ++G IG+ C+ + NI
Sbjct: 282 GGNAPYDSSHIKKAVKRTITPEFGEVTDITPDMRLTLKNAGHIIGSALCHIHVGEGLHNI 341
Query: 140 AYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSL 199
Y N+ DSTE + +D N E M +
Sbjct: 342 LYTGDYNY---------------------------DSTEML---RTADTNFQRVETMITE 371
Query: 200 SNY----DESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL 255
S Y D+ E S ++ GG V++P+ VG ++L +A M+
Sbjct: 372 STYGGKEDKQTSRDESNKKFLSKMKQTLNKGGKVIVPVFAVGRSQEILGLLADEMDRDYF 431
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
P++I + + +T PE+L ++ Q K++ F +KE + H+
Sbjct: 432 DYPVFIDGMIRDANALHT-AYPEFLSEKVQNKVYKDKSPF-----LKENIETI--GSHNE 483
Query: 316 KLLMNWQEPCIVFSPHWSLRLGPTIHLLRR-WSGDHNSLLVLENEVDAEL 364
+ ++ + P I+ + S+ GP + L+R S NSL+ + + + L
Sbjct: 484 RKQVHEEGPSIILTTSGSITGGPVMSYLKREASKSENSLIFVGYQFEGSL 533
>gi|341581963|ref|YP_004762455.1| cleavage and polyadenylation specificity factor subunit-like
protein [Thermococcus sp. 4557]
gi|340809621|gb|AEK72778.1| cleavage and polyadenylation specificity factor subunit-like
protein [Thermococcus sp. 4557]
Length = 651
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 79/173 (45%), Gaps = 21/173 (12%)
Query: 200 SNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPI 259
++Y EE EK + +++ GG VLIP VG +++ + + L++PI
Sbjct: 399 NDYQMPREEAEKR--LIEVIHQTIRRGGKVLIPAMAVGRAQEIMMVLEEYARIGGLEVPI 456
Query: 260 YIISSVAEELLAYTNTIPEWLCKQRQEKLFSG------DPLFAHVKLIKEKKIHVFPAVH 313
Y+ + E +T PE+L + +E++F +P+F V +E++
Sbjct: 457 YLDGMIWEATAIHT-AYPEYLSRHLREQIFHEGYNPFLNPIFKPVANSRERQD------- 508
Query: 314 SPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 365
+++ EP I+ + L GP++ ++ + D NS++ + + + L
Sbjct: 509 ----IIDSGEPAIIIATSGMLVGGPSVEYFKQLASDPKNSMVFVSYQAEGTLG 557
>gi|284174985|ref|ZP_06388954.1| mRNA 3'-end processing factor, putative [Sulfolobus solfataricus
98/2]
Length = 638
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 222 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWL 280
++ GG VLIP+ VG +++ I FM+ + ++P+Y ++ + +E+ A N PEWL
Sbjct: 405 TLNKGGKVLIPVLAVGRGQEIMLIINDFMKKKLIPEVPVY-VTGLVDEVTAIHNAYPEWL 463
Query: 281 CKQ-RQEKLFSGDPLFA--HVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLG 337
++ R+E L+ + F H K I+ K + EP I+ + L G
Sbjct: 464 GREVREEILYKDENPFTSEHFKRIEGYKEDIAKG-----------EPSIILATSGMLNGG 512
Query: 338 PTIHLLRRWSGDHNSLLVL 356
P + + + D + ++
Sbjct: 513 PAVEFFKTMAPDPKNAIIF 531
>gi|15897661|ref|NP_342266.1| mRNA 3'-end processing factor [Sulfolobus solfataricus P2]
gi|6015715|emb|CAB57542.1| mRNA 3'-end polyadenylation factor [Sulfolobus solfataricus P2]
gi|13813930|gb|AAK41056.1| mRNA 3'-end processing factor, putative [Sulfolobus solfataricus
P2]
Length = 639
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 222 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWL 280
++ GG VLIP+ VG +++ I FM+ + ++P+Y ++ + +E+ A N PEWL
Sbjct: 406 TLNKGGKVLIPVLAVGRGQEIMLIINDFMKKKLIPEVPVY-VTGLVDEVTAIHNAYPEWL 464
Query: 281 CKQ-RQEKLFSGDPLFA--HVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLG 337
++ R+E L+ + F H K I+ K + EP I+ + L G
Sbjct: 465 GREVREEILYKDENPFTSEHFKRIEGYKEDIAKG-----------EPSIILATSGMLNGG 513
Query: 338 PTIHLLRRWSGDHNSLLVL 356
P + + + D + ++
Sbjct: 514 PAVEFFKTMAPDPKNAIIF 532
>gi|374327735|ref|YP_005085935.1| mRNA 3'-end processing factor [Pyrobaculum sp. 1860]
gi|356643004|gb|AET33683.1| mRNA 3'-end processing factor, conjectural [Pyrobaculum sp. 1860]
Length = 644
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEW 279
D+V GG VLIP G ++L + +E + ++PIY+ + E L AY P +
Sbjct: 403 DTVSKGGKVLIPAFSTGRGQEILYILNKMIEGGLVPRVPIYVDGMIVETLNAYL-MYPHY 461
Query: 280 LCKQRQEKLFSGDPLFAHVK--LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLG 337
L + E+++ G F +I ++ V ++ + +EP ++ +PH L G
Sbjct: 462 LNPEVAEEIYGGVNPFTTSGSVVIVDRAKRVEDRINQVAKIAQSEEPAVIIAPHGMLNGG 521
Query: 338 PTIHLLRRWSGDHNSLLVL 356
P + + + D + L+
Sbjct: 522 PVLDYFAQLAYDERNKLIF 540
>gi|302832830|ref|XP_002947979.1| hypothetical protein VOLCADRAFT_103614 [Volvox carteri f.
nagariensis]
gi|300266781|gb|EFJ50967.1| hypothetical protein VOLCADRAFT_103614 [Volvox carteri f.
nagariensis]
Length = 1166
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 108/279 (38%), Gaps = 36/279 (12%)
Query: 92 VKDCISKVQTLRFGEEACYNGI-LIIKAFSSGLDIGACNWIISGAK---GNIAYISGSNF 147
V+ C+ +V+ +R+G+ + L A+SSG G W I+ + Y+ +
Sbjct: 578 VRYCLDRVRPVRYGQVVPLDSYELTAVAYSSGSGFGRAVWQIADGSERCRTVLYLPDAAA 637
Query: 148 ASGHAMDFDYRAIQGSD-LILYSD-LSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDES 205
A A + D LIL D L+ + EE++ +
Sbjct: 638 AHPFAPPMPLNLVSAPDALILGPDCLAPFPPSRPPQYHHHHHHQRVKEEVLRA------- 690
Query: 206 VEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISS 264
V GGS LIP+ G +LLE +A + + L +P+ I
Sbjct: 691 -----------------VVGGGSCLIPVYPTGEAWELLEGLAGALTSADLPHVPLMYIGP 733
Query: 265 VAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEP 324
+ LA + E L +RQ ++ FA L++ ++ V ++ P++
Sbjct: 734 RSGTSLALASVSLESLAPERQAAVYVPQHPFAFDALMQAGRLVVGSSLQDPEVQRCLAAG 793
Query: 325 C-----IVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLEN 358
C + + S R GP + LL R+ D +LL+L +
Sbjct: 794 CPRVVALAAADSLSYRGGPALELLLRFGPDPRNLLLLPH 832
>gi|154336691|ref|XP_001564581.1| putative cleavage and polyadenylation specificity factor
[Leishmania braziliensis MHOM/BR/75/M2904]
gi|134061616|emb|CAM38647.1| putative cleavage and polyadenylation specificity factor
[Leishmania braziliensis MHOM/BR/75/M2904]
Length = 756
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 71/368 (19%), Positives = 137/368 (37%), Gaps = 90/368 (24%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ F ++++T A +++M + + R GA + +W++
Sbjct: 93 ALPYFCNQTSFKGRVFMTSATKAFYKMVMNDFL------RIGAGASDLVTSEWLQ----- 141
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
I +++T+ + EE NGI + F++G
Sbjct: 142 -----------------------------STIDRIETIEYHEEVTVNGI-SFQPFNAGHV 171
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS-DLSSLDSTEDIDQS 183
+GA +++ A Y +G R + G+++ YS D+ +ST I +
Sbjct: 172 LGAAMFMVDIAGMRALY-------TGDFSRVPDRHLLGAEVPPYSPDILIAESTNGIREL 224
Query: 184 SFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLL 243
++ + S D V+ GG L+P+ +G +LL
Sbjct: 225 ESREEREH----------------------LFTSSVHDVVRRGGRCLVPVFALGRAQELL 262
Query: 244 EQIAIFMECSS--LKIPIYIISSVAEELLA-YTNTIPEWLCKQRQEKLFSGDPLFAHVKL 300
+ F + IPIY SS+A+ + Y + + +Q+ +P
Sbjct: 263 LILEEFWDAHKELQNIPIYYASSLAQRCMKLYQTFVSAMNDRVKQQHANHHNPF------ 316
Query: 301 IKEKKIHVFPAVHSPKLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLE 357
VF +HS ++++ PC+V + L+ G ++ L RW GD N +++
Sbjct: 317 -------VFKYIHSLIDTKSFEDNGPCVVLASPGMLQSGISLELFERWCGDRRNGIIMAG 369
Query: 358 NEVDAELA 365
VD +A
Sbjct: 370 YCVDGTIA 377
>gi|384434275|ref|YP_005643633.1| KH-domain/beta-lactamase-domain-containing protein [Sulfolobus
solfataricus 98/2]
gi|261602429|gb|ACX92032.1| KH-domain/beta-lactamase-domain protein [Sulfolobus solfataricus
98/2]
Length = 635
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 222 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWL 280
++ GG VLIP+ VG +++ I FM+ + ++P+Y ++ + +E+ A N PEWL
Sbjct: 402 TLNKGGKVLIPVLAVGRGQEIMLIINDFMKKKLIPEVPVY-VTGLVDEVTAIHNAYPEWL 460
Query: 281 CKQ-RQEKLFSGDPLFA--HVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLG 337
++ R+E L+ + F H K I+ K + EP I+ + L G
Sbjct: 461 GREVREEILYKDENPFTSEHFKRIEGYKEDIAKG-----------EPSIILATSGMLNGG 509
Query: 338 PTIHLLRRWSGDHNSLLVL 356
P + + + D + ++
Sbjct: 510 PAVEFFKTMAPDPKNAIIF 528
>gi|57641363|ref|YP_183841.1| cleavage and polyadenylation specficity factor subunit-like protein
[Thermococcus kodakarensis KOD1]
gi|57159687|dbj|BAD85617.1| cleavage and polyadenylation specficity factor subunit homolog
[Thermococcus kodakarensis KOD1]
Length = 648
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 21/173 (12%)
Query: 200 SNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPI 259
++Y EE EK + ++K GG VLIP VG +++ + + +++PI
Sbjct: 396 NDYQMPREEAEKR--LIEVIHQTLKRGGKVLIPAMAVGRAQEIMMVLEEYARVGGIEVPI 453
Query: 260 YIISSVAEELLAYTNTIPEWLCKQRQEKLFSG------DPLFAHVKLIKEKKIHVFPAVH 313
Y+ + E +T PE+L K +E++F +P+F V +E++
Sbjct: 454 YLDGMIWEATAIHT-AYPEYLSKHIREQIFHEGYNPFLNPIFKSVANSRERQD------- 505
Query: 314 SPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 365
+++ EP I+ + L GP++ ++ + D NS++ + + + L
Sbjct: 506 ----IIDSGEPAIIIATSGMLVGGPSVEYFKQLAPDPKNSIIFVSYQAEGTLG 554
>gi|71654879|ref|XP_816051.1| cleavage and polyadenylation specificity factor [Trypanosoma cruzi
strain CL Brener]
gi|70881152|gb|EAN94200.1| cleavage and polyadenylation specificity factor, putative
[Trypanosoma cruzi]
Length = 430
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 114/281 (40%), Gaps = 50/281 (17%)
Query: 92 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 151
++ I K++T+ + EE NGI + F++G +GA +++ A Y +G
Sbjct: 152 LQSTIEKIETVEYHEEVTVNGIRF-QPFNAGHVLGAALFMVDIAGMKTLY-------TGD 203
Query: 152 AMDFDYRAIQGSDLILYS-DLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEME 210
R + G+++ YS D+ +ST I + E
Sbjct: 204 FSRVPDRHLLGAEVPSYSPDILIAESTNGIRELE----------------------SREE 241
Query: 211 KLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--LKIPIYIISSVAEE 268
+ + D VK GG L+P+ +G +LL + + E IPIY SS+A+
Sbjct: 242 RETLFTTWVHDVVKGGGRCLVPVFALGRAQELLLILEEYWEAHKELQHIPIYYASSLAQR 301
Query: 269 LLA-YTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQE--PC 325
+ Y + + +Q+ +P VF +HS ++++ PC
Sbjct: 302 CMKLYQTFVSAMNDRVKQQHANHRNPF-------------VFKYIHSLMETRSFEDTGPC 348
Query: 326 IVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 365
+V + L+ G ++ L RW GD N +++ VD +A
Sbjct: 349 VVLASPGMLQSGISLELFERWCGDRRNGIIIAGYCVDGTIA 389
>gi|428177137|gb|EKX46018.1| hypothetical protein GUITHDRAFT_70813 [Guillardia theta CCMP2712]
Length = 485
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 65/354 (18%), Positives = 129/354 (36%), Gaps = 81/354 (22%)
Query: 6 LPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELEL 65
LP+ T + G+ +Y T I +++E+ +++E R EE ++
Sbjct: 76 LPYFTEVLGYDGPMYATHPTKAIMPILLEDYRKISVERRGV--------------EEKDM 121
Query: 66 LPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDI 125
S +KDC+ KV E I+ + +G +
Sbjct: 122 FSSQ---------------------QIKDCMMKVTPCALEETIMIEEDFEIRPYYAGHVL 160
Query: 126 GACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSF 185
GA + I + +I Y N M D L DL +ST ++
Sbjct: 161 GAAMFYIRVGQQSILYTGDYN------MTPDRHLGSARCDKLRPDLLITEST----YATT 210
Query: 186 SDDNNNWEE--LMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLL 243
++ W E ++N +S + V+ GG VLIP+ +G +L
Sbjct: 211 IRESKRWRERDMLNQVS--------------------ECVRNGGKVLIPVFALGRAQELC 250
Query: 244 EQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIK 302
+ F E + LK+PIY + + E+ Y W ++ ++ + F H++
Sbjct: 251 LLLDAFWERTGLKVPIYFSAGLTEKANLYYKMYISWTNQKIKDTFVKRNVFDFQHIQPFD 310
Query: 303 EKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
+ ++ P ++F+ L G ++ + ++W+ +L+++
Sbjct: 311 -------------RAFIDRPGPMVLFATPGMLHGGLSMEVFKKWAPSDKNLVIM 351
>gi|159487337|ref|XP_001701679.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280898|gb|EDP06654.1| predicted protein [Chlamydomonas reinhardtii]
Length = 460
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 15/139 (10%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 280
D+V AGG VLIP +G +LL +A L +PIY S++A L Y + W
Sbjct: 233 DTVAAGGKVLIPTFAMGRAQELLMLLADCWRRKGLTVPIYFSSAMASRALTYYQLLLNWT 292
Query: 281 CKQRQEKLFSGDPLFAHVKLIKEKKIH-VFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPT 339
A+V+ E ++ +F + L+ P ++F+ ++ G +
Sbjct: 293 N--------------ANVRKAVEADVYGMFRTRPWDRSLLQAPGPAVLFASPGNITSGVS 338
Query: 340 IHLLRRWSGDHNSLLVLEN 358
+ R W+G +L+VL
Sbjct: 339 LEAFRAWAGSSRNLVVLAG 357
>gi|401428833|ref|XP_003878899.1| cleavage and polyadenylation specificity factor,putative
[Leishmania mexicana MHOM/GT/2001/U1103]
gi|322495148|emb|CBZ30452.1| cleavage and polyadenylation specificity factor,putative
[Leishmania mexicana MHOM/GT/2001/U1103]
Length = 756
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 73/368 (19%), Positives = 139/368 (37%), Gaps = 90/368 (24%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ F +I++T A +++M + + R GA + +W++
Sbjct: 93 ALPYFCNQTSFKGRIFMTSATKAFYKMVMNDFL------RIGAGASDLVTSEWLQ----- 141
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
I +++T+ + EE NGI + F++G
Sbjct: 142 -----------------------------STIDRIETVEYHEEVTVNGI-SFQPFNAGHV 171
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS-DLSSLDSTEDIDQS 183
+GA +++ A Y +G R + G+++ YS D+ +ST I +
Sbjct: 172 LGAAMFMVDIAGMRALY-------TGDFSRVPDRHLLGAEVPPYSPDILIAESTNGIREL 224
Query: 184 SFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLL 243
++ + SV E+ V+ GG L+P+ +G +LL
Sbjct: 225 ESREEREQL---------FTGSVHEV-------------VRRGGRCLVPVFALGRAQELL 262
Query: 244 EQIAIFMECSS--LKIPIYIISSVAEELLA-YTNTIPEWLCKQRQEKLFSGDPLFAHVKL 300
+ F + IPIY SS+A+ + Y + + +Q+ +P
Sbjct: 263 LILEEFWDAHKELQNIPIYYASSLAQRCMKLYQTFVSAMNDRVKQQHANHHNPF------ 316
Query: 301 IKEKKIHVFPAVHSPKLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLE 357
VF +HS ++++ PC+V + L+ G ++ L RW GD N +++
Sbjct: 317 -------VFKYIHSLMDTKSFEDNGPCVVLASPGMLQSGISLELFERWCGDRRNGIIMAG 369
Query: 358 NEVDAELA 365
VD +A
Sbjct: 370 YCVDGTIA 377
>gi|223478352|ref|YP_002582770.1| RNA-metabolising metallo-beta-lactamase family protein
[Thermococcus sp. AM4]
gi|214033578|gb|EEB74405.1| RNA-metabolising metallo-beta-lactamase family [Thermococcus sp.
AM4]
Length = 648
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 79/173 (45%), Gaps = 21/173 (12%)
Query: 200 SNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPI 259
++Y EE EK + ++K GG VLIP VG +++ + + + +PI
Sbjct: 396 NDYQMPREEAEKR--LIEVIHHTIKRGGKVLIPAMAVGRAQEIMMVLEEYARVGGIDVPI 453
Query: 260 YIISSVAEELLAYTNTIPEWLCKQRQEKLFSG------DPLFAHVKLIKEKKIHVFPAVH 313
Y+ + E +T PE+L ++ +E++F +P+F V +E++
Sbjct: 454 YLDGMIWEATAIHT-AYPEYLSRRLREQIFHEGYNPFLNPIFKSVANSRERQD------- 505
Query: 314 SPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDH-NSLLVLENEVDAELA 365
+++ EP I+ + L GP++ ++ + D NS++ + + + L
Sbjct: 506 ----IIDSGEPAIIIATSGMLVGGPSVEYFKQLAPDEKNSIIFVSYQAEGTLG 554
>gi|291238246|ref|XP_002739041.1| PREDICTED: cleavage and polyadenylation specific factor 3-like
[Saccoglossus kowalevskii]
Length = 573
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 100/256 (39%), Gaps = 36/256 (14%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 280
D V+ GG VLIP+ +G +L + F + +LK PIY + + E+ Y W
Sbjct: 200 DCVEKGGKVLIPVFALGRAQELCILLETFWDRMNLKAPIYFSTGLTEKANHYYKLFITW- 258
Query: 281 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 340
Q+ K F +F H+ P S + P +VF+ L G ++
Sbjct: 259 TNQKIRKTFVQRNMFEFR--------HIKPFDRS---YTDNPGPMVVFATPGMLHGGLSL 307
Query: 341 HLLRRWSGDHNSLL--------------VLENEVDAELAVLPFKPISMKVLQCSFLSGKK 386
H+ ++W+ + +++ +L + EL + + V SF +
Sbjct: 308 HVFKKWASNEKNMVIMPGYCVAGTVGHKILNGQRKIELENRQTIDVKLSVQYMSFSAHAD 367
Query: 387 LQKVQPLLKILQPKLVLFPEEWRTHVSFSD---VTSFSVSHYSENETIHIPSLKESAELE 443
+ + L+K +PK V+ + F V F V + +P ES +E
Sbjct: 368 AKGIMQLIKQCEPKNVMLVHGEAKKMDFLKQKIVQQFGVQCF-------MPPNGESVVIE 420
Query: 444 IAADIASKFQWRMLKQ 459
++I + +LK+
Sbjct: 421 THSNIPADISVNLLKR 436
>gi|402578305|gb|EJW72259.1| hypothetical protein WUBG_16832, partial [Wuchereria bancrofti]
Length = 107
Score = 46.6 bits (109), Expect = 0.037, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 322 QEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFKPISMKVLQCS 380
+ PC++F+ H SLR+G +H L W D N+L++ + + + P++ + ++
Sbjct: 2 RTPCVIFTGHPSLRIGNAVHFLEMWGNDSKNALIMTDPDYPIQNVYGPYEKLPIRAFFFP 61
Query: 381 FLSGKKLQKVQP-LLKILQPKLVLFPE 406
+ ++ P +L L PKL++ PE
Sbjct: 62 IETRLDFSQLNPSILPDLAPKLLVMPE 88
>gi|385773323|ref|YP_005645889.1| beta-lactamase [Sulfolobus islandicus HVE10/4]
gi|323477437|gb|ADX82675.1| beta-lactamase domain protein [Sulfolobus islandicus HVE10/4]
Length = 638
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 17/149 (11%)
Query: 222 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWL 280
++ GG VLIP+ VG +++ I FM+ + ++P+Y ++ + +E+ A N PEWL
Sbjct: 405 TLNRGGKVLIPVLAVGRGQEIMLIINDFMKKKLIPEVPVY-VTGLVDEVTAIHNAYPEWL 463
Query: 281 CKQ-RQEKLFSGDPLFA--HVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLG 337
++ R+E L+ + F H K I+ K + EP I+ + L G
Sbjct: 464 GREVREEILYKDENPFTSEHFKRIEGYKEDIAKG-----------EPSIILATSGMLNGG 512
Query: 338 PTIHLLRRWSGD-HNSLLVLENEVDAELA 365
P + + + D N+++ + + + L
Sbjct: 513 PAVEFFKTMAPDPKNAIIFVSYQAEGTLG 541
>gi|387594235|gb|EIJ89259.1| integrator complex subunit 11 [Nematocida parisii ERTm3]
gi|387594982|gb|EIJ92609.1| integrator complex subunit 11 [Nematocida parisii ERTm1]
Length = 502
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 41/207 (19%)
Query: 219 AIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISS-------VAEELLA 271
+ VK GG VLIP+ +G +L + E + L IPIY ++ + ++ +
Sbjct: 225 VVQCVKNGGKVLIPVFALGRAHELCLLLDTHWEKTKLDIPIYTSATLTHKANDIYKQFID 284
Query: 272 YTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPH 331
YT+ +R LF F HVK L + + P I+FS
Sbjct: 285 YTHEHIRSTLHKRN--LFD----FRHVKQFDSN-------------LASLEGPMILFSSP 325
Query: 332 WSLRLGPTIHLLRRWSGDHNSLL--------------VLENEVDAELAVLPFKPISMKVL 377
L GP++ + ++W GD N+++ VL E+ + + P+ MKV
Sbjct: 326 GMLHSGPSLSIFKKWCGDPNNMVIFPGYCVRGTIGERVLNGASQIEVGGIVY-PVRMKVK 384
Query: 378 QCSFLSGKKLQKVQPLLKILQPKLVLF 404
F + + + L++ +P V+
Sbjct: 385 NMPFSAHADQKGILALVQQCEPDNVIL 411
>gi|227830349|ref|YP_002832129.1| beta-lactamase domain-containing protein [Sulfolobus islandicus
L.S.2.15]
gi|227456797|gb|ACP35484.1| beta-lactamase domain protein [Sulfolobus islandicus L.S.2.15]
Length = 638
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 17/149 (11%)
Query: 222 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWL 280
++ GG VLIP+ VG +++ I FM+ + ++P+Y ++ + +E+ A N PEWL
Sbjct: 405 TLNRGGKVLIPVLAVGRGQEIMLIINDFMKKKLIPEVPVY-VTGLVDEVTAIHNAYPEWL 463
Query: 281 CKQ-RQEKLFSGDPLFA--HVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLG 337
++ R+E L+ + F H K I+ K + EP I+ + L G
Sbjct: 464 GREVREEILYKDENPFTSEHFKRIEGYKEDIAKG-----------EPSIILATSGMLNGG 512
Query: 338 PTIHLLRRWSGD-HNSLLVLENEVDAELA 365
P + + + D N+++ + + + L
Sbjct: 513 PAVEFFKTMAPDPKNAIIFVSYQAEGTLG 541
>gi|229579166|ref|YP_002837564.1| beta-lactamase domain-containing protein [Sulfolobus islandicus
Y.G.57.14]
gi|229582079|ref|YP_002840478.1| beta-lactamase domain-containing protein [Sulfolobus islandicus
Y.N.15.51]
gi|284997854|ref|YP_003419621.1| beta-lactamase domain-containing protein [Sulfolobus islandicus
L.D.8.5]
gi|228009880|gb|ACP45642.1| beta-lactamase domain protein [Sulfolobus islandicus Y.G.57.14]
gi|228012795|gb|ACP48556.1| beta-lactamase domain protein [Sulfolobus islandicus Y.N.15.51]
gi|284445749|gb|ADB87251.1| beta-lactamase domain protein [Sulfolobus islandicus L.D.8.5]
Length = 638
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 17/149 (11%)
Query: 222 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWL 280
++ GG VLIP+ VG +++ I FM+ + ++P+Y ++ + +E+ A N PEWL
Sbjct: 405 TLNRGGKVLIPVLAVGRGQEIMLIINDFMKKKLIPEVPVY-VTGLVDEVTAIHNAYPEWL 463
Query: 281 CKQ-RQEKLFSGDPLFA--HVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLG 337
++ R+E L+ + F H K I+ K + EP I+ + L G
Sbjct: 464 GREVREEILYKDENPFTSEHFKRIEGYKEDIAKG-----------EPSIILATSGMLNGG 512
Query: 338 PTIHLLRRWSGD-HNSLLVLENEVDAELA 365
P + + + D N+++ + + + L
Sbjct: 513 PAVEFFKTMAPDPKNAIIFVSYQAEGTLG 541
>gi|227827653|ref|YP_002829433.1| beta-lactamase [Sulfolobus islandicus M.14.25]
gi|229584857|ref|YP_002843359.1| beta-lactamase domain-containing protein [Sulfolobus islandicus
M.16.27]
gi|238619821|ref|YP_002914647.1| beta-lactamase domain-containing protein [Sulfolobus islandicus
M.16.4]
gi|227459449|gb|ACP38135.1| beta-lactamase domain protein [Sulfolobus islandicus M.14.25]
gi|228019907|gb|ACP55314.1| beta-lactamase domain protein [Sulfolobus islandicus M.16.27]
gi|238380891|gb|ACR41979.1| beta-lactamase domain protein [Sulfolobus islandicus M.16.4]
Length = 638
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 17/149 (11%)
Query: 222 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWL 280
++ GG VLIP+ VG +++ I FM+ + ++P+Y ++ + +E+ A N PEWL
Sbjct: 405 TLNRGGKVLIPVLAVGRGQEIMLIINDFMKKKLIPEVPVY-VTGLVDEVTAIHNAYPEWL 463
Query: 281 CKQ-RQEKLFSGDPLFA--HVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLG 337
++ R+E L+ + F H K I+ K + EP I+ + L G
Sbjct: 464 GREVREEILYKDENPFTSEHFKRIEGYKEDIAKG-----------EPSIILATSGMLNGG 512
Query: 338 PTIHLLRRWSGD-HNSLLVLENEVDAELA 365
P + + + D N+++ + + + L
Sbjct: 513 PAVEFFKTMAPDPKNAIIFVSYQAEGTLG 541
>gi|348689662|gb|EGZ29476.1| hypothetical protein PHYSODRAFT_552782 [Phytophthora sojae]
Length = 513
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 26/182 (14%)
Query: 220 IDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEW 279
+ +V+ GG+VLIP + G L+L+ + + + L+ PI ++ ++ + EW
Sbjct: 5 LKTVRNGGNVLIPTDSSGRVLELMRVLDQYWIQNKLRDPIALLHDMSYYTPKAAQAMLEW 64
Query: 280 LCKQRQEKLFS---GDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLR 335
C R K F +P F+H+ L VH+ + L P +V + SL
Sbjct: 65 -CNDRIAKNFDVGRQNPFQFSHIHL-----------VHTLEELDALPSPKVVLATSPSLE 112
Query: 336 LGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK----PISMKVLQCS-----FLSGK 385
G + RW+ D NS++ + A K P + KV+ C+ FL G
Sbjct: 113 CGFAKDIFIRWAPDPRNSIIFTSTTPETSFASRVLKIAKDPSAAKVISCTVTKKVFLEGA 172
Query: 386 KL 387
+L
Sbjct: 173 EL 174
>gi|449446027|ref|XP_004140773.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
2-like [Cucumis sativus]
Length = 738
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 62/135 (45%), Gaps = 7/135 (5%)
Query: 222 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLC 281
+++A G+VL+P++ G L+L++ + + E SL PI+ ++ VA + Y + EW+
Sbjct: 225 TLRANGNVLLPVDTAGRVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMS 284
Query: 282 KQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIH 341
+ F H + HV ++ +L P +V + SL G +
Sbjct: 285 DTIAKS-------FEHTRNNAFLLKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHD 337
Query: 342 LLRRWSGDHNSLLVL 356
+ W+ D +L++
Sbjct: 338 IFVDWAMDAKNLVLF 352
>gi|452825586|gb|EME32582.1| RNA-metabolising metallo-beta-lactamase family protein [Galdieria
sulphuraria]
Length = 370
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 65/354 (18%), Positives = 135/354 (38%), Gaps = 67/354 (18%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP LT G+ IY++E ++ ++EE + + G +E + +W +
Sbjct: 43 ALPILTERWGYDGPIYMSEPTRKLSYYILEECV------GSWGGDDEWTDSSRSEWSYTQ 96
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
V+ C++KV + G+ + + ++ +G
Sbjct: 97 -------------------------REVESCLTKVTIMEPGQSISVGENVQVHSWMAGHV 131
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA ++ S N + +F S F + D+ D+ ++T +S
Sbjct: 132 LGA--YMFSIVVDNHRILYTGDFTS--CPTFHLPPARVDDIPYPPDVILSEATY---ATS 184
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
F D N ++E + + C +D GG VL+P+ +G +LL
Sbjct: 185 FKDGRLN---------------NQVEFIQNVLDCLLD----GGKVLVPVFAIGRAQELLL 225
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEW--LCKQRQEKLFSGDPLFAHVKLIK 302
+ ++ + L PI + A ++L W R E++ S ++ V+++
Sbjct: 226 LLEMYWQRFHLSFPILFSTKNAHQVLQIYTEFAHWTRTPSTRDEQMMSYQTWWSRVQVVD 285
Query: 303 EKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
+++ AV W P + + +L G ++ + RR + D +LL++
Sbjct: 286 PEQL--LDAVE------EWDRPLVALTTPGTLARGLSLQVFRRIAPDEKNLLII 331
>gi|397651897|ref|YP_006492478.1| cleavage and polyadenylation specifity factor protein [Pyrococcus
furiosus COM1]
gi|393189488|gb|AFN04186.1| cleavage and polyadenylation specifity factor protein [Pyrococcus
furiosus COM1]
Length = 648
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 13/162 (8%)
Query: 207 EEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVA 266
EE EK + +++ GG VLIP VG +++ + + + +PIY+ +
Sbjct: 403 EEAEKR--LIEVIHQTIRRGGKVLIPAMAVGRAQEIMMVLEEYARVGGIDVPIYLDGMIW 460
Query: 267 EELLAYTNTIPEWLCKQRQEKLFSGD--PLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEP 324
E +T PE+L K +E++F D P + + H + +++ EP
Sbjct: 461 EATAIHT-AYPEYLSKTLREQIFKEDYNPFLSEI-------FHPVANSKERQDIIDSNEP 512
Query: 325 CIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 365
I+ + L GP++ ++ + D NS++ + + + L
Sbjct: 513 AIIIASSGMLVGGPSVEYFKQLASDKRNSIIFVSYQAEGTLG 554
>gi|256810164|ref|YP_003127533.1| beta-lactamase [Methanocaldococcus fervens AG86]
gi|256793364|gb|ACV24033.1| beta-lactamase domain protein [Methanocaldococcus fervens AG86]
Length = 421
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 98/213 (46%), Gaps = 35/213 (16%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEW 279
++++ GG V+IP+ +G ++L I +M LK +PIY ++ Y + I W
Sbjct: 204 ETIENGGKVIIPVFAIGRAQEILLIINNYMRSGKLKEVPIYTDGALIHATAVYLSYI-NW 262
Query: 280 LCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP--KLLMNWQEPCIVFSPHWSLRLG 337
L + +K + E +I+ F V L+ N +EPCI+ S ++ G
Sbjct: 263 LNPK--------------IKNMVENRINPFGVVKKADESLVFN-KEPCIIVSTSGMVQGG 307
Query: 338 PTIHLLRRWSGDHNSLLVLENEVDAELA---------VLPFK---PISMKVLQCSFLS-G 384
P + L+ N L++ + + L + PFK P+ KV++ F + G
Sbjct: 308 PVLKYLKLLKDPKNKLILTGYQAEGTLGRELEEGAKEIQPFKNKIPVRGKVVKIEFSAHG 367
Query: 385 KKLQKVQPLLKILQPK--LVLFPEEWRTHVSFS 415
V+ + KI +P+ +V+ E +++ +SF+
Sbjct: 368 DYNSLVRYIKKIPKPEKAIVMHGERYQS-LSFA 399
>gi|18977777|ref|NP_579134.1| cleavage and polyadenylation specifity factor protein [Pyrococcus
furiosus DSM 3638]
gi|18893520|gb|AAL81529.1| cleavage and polyadenylation specifity factor protein [Pyrococcus
furiosus DSM 3638]
Length = 651
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 13/162 (8%)
Query: 207 EEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVA 266
EE EK + +++ GG VLIP VG +++ + + + +PIY+ +
Sbjct: 406 EEAEKR--LIEVIHQTIRRGGKVLIPAMAVGRAQEIMMVLEEYARVGGIDVPIYLDGMIW 463
Query: 267 EELLAYTNTIPEWLCKQRQEKLFSGD--PLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEP 324
E +T PE+L K +E++F D P + + H + +++ EP
Sbjct: 464 EATAIHT-AYPEYLSKTLREQIFKEDYNPFLSEI-------FHPVANSKERQDIIDSNEP 515
Query: 325 CIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 365
I+ + L GP++ ++ + D NS++ + + + L
Sbjct: 516 AIIIASSGMLVGGPSVEYFKQLASDKRNSIIFVSYQAEGTLG 557
>gi|392568293|gb|EIW61467.1| hypothetical protein TRAVEDRAFT_162694 [Trametes versicolor
FP-101664 SS1]
Length = 943
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 78/198 (39%), Gaps = 23/198 (11%)
Query: 88 CIAHVKDCISKVQTLRFGEEACYNGI---LIIKAFSSGLDIGACNW-IISGAKGNIAYIS 143
+ V D V LR+ + G L I F++G +G W I S + G I Y
Sbjct: 171 TVQQVHDAFDSVNVLRYSQPCHLQGKCQGLTIIPFNAGHTLGGTIWKIRSPSAGTILYAV 230
Query: 144 GSNFASGHAMDFDYRAIQGSDLILYSDLSSLDS-TEDIDQSSFSDDNNNWEELMNSLSNY 202
N +D QGS ++ L+ D D ++++ +
Sbjct: 231 DMNHMRERHLDGTVLIRQGSTGGVFESLARPDLLITDAERANVT---------------- 274
Query: 203 DESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYII 262
+ ++ + + C ++ + S+L+P + L+LL + S LK PI ++
Sbjct: 275 --TARRKDRDSALLDCVTATLSSRNSLLLPCDSSTRVLELLVLLDQHWNYSRLKYPICLL 332
Query: 263 SSVAEELLAYTNTIPEWL 280
S E+L + ++ EWL
Sbjct: 333 SRTGREMLTFVRSMMEWL 350
>gi|385775961|ref|YP_005648529.1| beta-lactamase [Sulfolobus islandicus REY15A]
gi|323474709|gb|ADX85315.1| beta-lactamase domain protein [Sulfolobus islandicus REY15A]
Length = 638
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 17/149 (11%)
Query: 222 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWL 280
++ GG VLIP+ VG +++ I FM+ + ++P+Y ++ + +E+ A N PEWL
Sbjct: 405 TLNRGGKVLIPVLAVGRGQEIMLIINDFMKKKLIPEVPVY-LTGLVDEVTAIHNAYPEWL 463
Query: 281 CKQ-RQEKLFSGDPLFA--HVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLG 337
++ R+E L+ + F H K I+ K + EP I+ + L G
Sbjct: 464 GREVREEILYKDENPFTSEHFKRIEGYKEDIAKG-----------EPSIILATSGMLNGG 512
Query: 338 PTIHLLRRWSGD-HNSLLVLENEVDAELA 365
P + + + D N+++ + + + L
Sbjct: 513 PAVEFFKTMAPDPKNAIIFVSYQAEGTLG 541
>gi|20094663|ref|NP_614510.1| metal-dependent RNase [Methanopyrus kandleri AV19]
gi|19887824|gb|AAM02440.1| Predicted metal-dependent RNase, consists of a
metallo-beta-lactamase domain and an RNA-binding KH
domain [Methanopyrus kandleri AV19]
Length = 652
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 10/138 (7%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 280
D++K GG VLIP VG +++ + L+ P+Y+ + E +T PE+L
Sbjct: 417 DTLKKGGKVLIPSFAVGRAQEVMLVLEDMHRKDELEGPVYLDGMIYEATAIHT-AYPEYL 475
Query: 281 CKQRQEKLF--SGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGP 338
++ Q ++ DP + V E H + +M EP ++ S L GP
Sbjct: 476 NRRLQHRILHEDDDPFTSEVFEPVEGSDHR-------QAIMEDDEPAVILSTSGMLEGGP 528
Query: 339 TIHLLRRWSGDHNSLLVL 356
+ LR S D + L+
Sbjct: 529 ILEYLRELSDDPKNTLIF 546
>gi|390960706|ref|YP_006424540.1| hypothetical protein CL1_0538 [Thermococcus sp. CL1]
gi|390519014|gb|AFL94746.1| hypothetical protein containing KH domain /beta-lactamase-domain
protein [Thermococcus sp. CL1]
Length = 648
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 79/173 (45%), Gaps = 21/173 (12%)
Query: 200 SNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPI 259
++Y EE EK + +++ GG VLIP VG +++ + + +++PI
Sbjct: 396 NDYQMPREEAEKR--LIEVIHQTIRRGGKVLIPAMAVGRAQEIMMVLEEYARVGGIEVPI 453
Query: 260 YIISSVAEELLAYTNTIPEWLCKQRQEKLFSG------DPLFAHVKLIKEKKIHVFPAVH 313
Y+ + E +T PE+L + +E++F +P+F V +E++
Sbjct: 454 YLDGMIWEATAIHT-AYPEYLSRHLREQIFHEGYNPFLNPIFKSVANSRERQD------- 505
Query: 314 SPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 365
+++ EP I+ + L GP++ ++ + D NS++ + + + L
Sbjct: 506 ----IIDSGEPAIIIATSGMLVGGPSVEYFKQLAPDPKNSIVFVSYQAEGTLG 554
>gi|119719226|ref|YP_919721.1| beta-lactamase domain-containing protein [Thermofilum pendens Hrk
5]
gi|119524346|gb|ABL77718.1| beta-lactamase domain protein [Thermofilum pendens Hrk 5]
Length = 639
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 128/309 (41%), Gaps = 45/309 (14%)
Query: 54 GPQWMKWEEL---ELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACY 110
GP +M L +LL K+A E +EL + V + TL +GE
Sbjct: 259 GPVYMTEPTLHLSKLLFEDYIKVAQREGKNELY----SMRDVNSLLLNTYTLSYGEVTDI 314
Query: 111 NGILIIKAFSSGLDIGACNWIISGAKG--NIAYISGSNFASGHAMDFDYRAIQGSDLILY 168
+ + + +G +G+ + +G NI Y +A +D Y +++++
Sbjct: 315 APEIRLTFYRAGHILGSAMVHLHIGEGLINIVYTGDMKYARTMLLDPAYNKFPRAEVLII 374
Query: 169 SDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGS 228
S+ S D+ L + D++ E+ K+ +++++ G
Sbjct: 375 E--STYGSKSDV------------------LPSEDDAKLELAKIV------LETIERKGV 408
Query: 229 VLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEK 287
VLIP+ VG ++L + M+ ++ ++PI+ I + +E+ A T PE+L +E
Sbjct: 409 VLIPVLAVGRAQEVLLALLDLMKKGAVPRVPIF-IEGMIDEVSAVHMTFPEYLSATIREM 467
Query: 288 LFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWS 347
++ + F + IHV + + ++P I+ + L GP + LR +
Sbjct: 468 IYRDENPFT------SENIHVIRG--EAREDITEKKPSIILATSGMLTGGPVLDYLRILA 519
Query: 348 GDHNSLLVL 356
D NS LV
Sbjct: 520 DDENSSLVF 528
>gi|70606450|ref|YP_255320.1| metallo-beta-lactamase superfamily protein [Sulfolobus
acidocaldarius DSM 639]
gi|449066664|ref|YP_007433746.1| metallo-beta-lactamase superfamily protein [Sulfolobus
acidocaldarius N8]
gi|449068938|ref|YP_007436019.1| metallo-beta-lactamase superfamily protein [Sulfolobus
acidocaldarius Ron12/I]
gi|68567098|gb|AAY80027.1| hypothetical metallo-beta-lactamase superfamily protein [Sulfolobus
acidocaldarius DSM 639]
gi|449035172|gb|AGE70598.1| metallo-beta-lactamase superfamily protein [Sulfolobus
acidocaldarius N8]
gi|449037446|gb|AGE72871.1| metallo-beta-lactamase superfamily protein [Sulfolobus
acidocaldarius Ron12/I]
Length = 631
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 73/166 (43%), Gaps = 17/166 (10%)
Query: 204 ESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYII 262
E+ EE E A + ++ GG VLIP+ VG +++ I M+ + ++P+YI
Sbjct: 382 ENREESE--AKLIDIINKTISKGGKVLIPVLSVGRGQEIMLVINDAMKNKKIPEVPVYI- 438
Query: 263 SSVAEELLAYTNTIPEWLCKQRQEKLFSGD--PLFAHVKLIKEKKIHVFPAVHSPKLLMN 320
+ + +E+ A PEWL ++ +E + D P + F + K +
Sbjct: 439 TGMVDEITAIHTAYPEWLSRELREAILYRDENPFMS----------EFFKRIEGYKEDIA 488
Query: 321 WQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 365
EP I+ + L GP + + + D NS++ + + + L
Sbjct: 489 QGEPSIIIATSGMLNGGPAVEFFKNMAHDTRNSIVFVSYQAEGTLG 534
>gi|432328821|ref|YP_007246965.1| universal archaeal KH-domain/beta-lactamase-domain protein
[Aciduliprofundum sp. MAR08-339]
gi|432135530|gb|AGB04799.1| universal archaeal KH-domain/beta-lactamase-domain protein
[Aciduliprofundum sp. MAR08-339]
Length = 647
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 80/186 (43%), Gaps = 27/186 (14%)
Query: 207 EEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSV 265
E E+L I S + GG +LIP+ VG +++ + FM L +IPIY+ +
Sbjct: 403 EAAERLKDIVSRTFER---GGKILIPVFAVGRSQEVMLVLESFMRNGELPEIPIYLDGMI 459
Query: 266 AEELLAYTNTIPEWLCKQRQEKLFSG--DPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQE 323
E + PE+L K +E +F +P + + H + + +++ +
Sbjct: 460 WEATTIHA-AYPEYLNKDLRELIFQKKENPFLSPI-------FHRVESSERREEVISSSD 511
Query: 324 PCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLV-------------LENEVDAELAVLPFK 370
P IV S + GP + + W+ D + L+ ++N + L L K
Sbjct: 512 PAIVLSTSGMMNGGPVLEYFKHWADDPRNTLIFVGYQAVGTLGRRIQNGLSEVLMSLGGK 571
Query: 371 PISMKV 376
PI++KV
Sbjct: 572 PITIKV 577
>gi|336121871|ref|YP_004576646.1| RNA-metabolising metallo-beta-lactamase [Methanothermococcus
okinawensis IH1]
gi|334856392|gb|AEH06868.1| RNA-metabolising metallo-beta-lactamase [Methanothermococcus
okinawensis IH1]
Length = 422
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 90/197 (45%), Gaps = 30/197 (15%)
Query: 222 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWL 280
+++ GG V+IP+ VG +++ I+ +M LK +P+Y+ S+ Y + EWL
Sbjct: 205 TIEKGGKVIIPVFAVGRAQEIMAIISNYMRSGLLKNVPVYVDGSLIHATGVYL-SYSEWL 263
Query: 281 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAV-HSPKLLMNWQEPCIVFSPHWSLRLGPT 339
+ + L E +I+ F V + + +++ ++ CIV S ++ GP
Sbjct: 264 NPKIRNGL--------------ENRINPFGDVKKANRQIIDKEDSCIVISTSGMVQGGPV 309
Query: 340 IHLLRRWSGDHNSLLVLENEVDAELA---------VLPFK---PISMKVLQCSFLS-GKK 386
+ L+ N +++ + + L + PFK PI+ +V++ F + G
Sbjct: 310 LQYLKLLKDPKNKIILTGYQAEDTLGRQLEEGAKEITPFKNKLPINGEVVKIEFSAHGDY 369
Query: 387 LQKVQPLLKILQPKLVL 403
++ L KI +PK V
Sbjct: 370 NSLIRYLKKIPKPKKVF 386
>gi|281208327|gb|EFA82503.1| beta-lactamase domain-containing protein [Polysphondylium pallidum
PN500]
Length = 738
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 107/266 (40%), Gaps = 54/266 (20%)
Query: 111 NGILIIKAFSSGLDIGACNWIISGAKGNIAY-ISGSNFASGHAMDFDYRAIQGSDLILYS 169
+ + I +S+G IG W I+ I Y I ++ GH F + +QG DL
Sbjct: 145 SATITITPYSAGHMIGGSVWKITKETDTIIYAIDFNHRKEGHLEGF-FPVLQGQDL---- 199
Query: 170 DLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSV 229
L T I + + +++ +EK + S + +++ GG+V
Sbjct: 200 ----LKPTHLITDARHA-------------RTPPTALKRIEKDKALYSTLLKTLREGGNV 242
Query: 230 LIPINRVGVFLQLLEQI--------------AIFMECSSLKIPIYIISSVAEELLAYTNT 275
L+P++ G L+LL+ I IF+ + Y + A+ L + +T
Sbjct: 243 LLPVDTAGRSLELLQSIESHWAQQRLSGAYTVIFLNNVT-----YNVCEFAKSQLEFMST 297
Query: 276 IPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLR 335
+QR E +F+ F ++KL +++ + LM +V + L
Sbjct: 298 AAGLKFEQRNENIFA----FKNIKLCH--------SIYDLENLMGLSSNYVVLASGKDLE 345
Query: 336 LGPTIHLLRRWSGDHNSLLVLENEVD 361
G L +W+ D +L+++ + V+
Sbjct: 346 SGYARELFIKWAADSKNLILMTDSVE 371
>gi|339244969|ref|XP_003378410.1| putative metallo-beta-lactamase domain protein [Trichinella
spiralis]
gi|316972680|gb|EFV56345.1| putative metallo-beta-lactamase domain protein [Trichinella
spiralis]
Length = 562
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 12/136 (8%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 280
D + GG VLIP+ +G +L + + E +L IPIY+ +AE+ + Y W
Sbjct: 194 DCINNGGKVLIPVFALGRAQELCILLESYWERMNLSIPIYVSKGMAEKAVDYYKLFVTW- 252
Query: 281 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 340
++ +K F +F HV P S + P +VF+ L G ++
Sbjct: 253 TSEKIKKTFVKRNMFDFK--------HVLPFEDS---FADTPGPMVVFATPGMLHSGQSL 301
Query: 341 HLLRRWSGDHNSLLVL 356
+ ++W+ + +++++
Sbjct: 302 KIFKKWATNEKNMVIM 317
>gi|27372065|gb|AAN87883.1| FEG protein [Arabidopsis thaliana]
Length = 613
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 78/377 (20%), Positives = 135/377 (35%), Gaps = 75/377 (19%)
Query: 53 SGPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEAC 109
+GP +M + L P L R++ + G E H+ +C+ KV + +
Sbjct: 86 NGPIYMSYPTKALSPLMLEDYRRVMVDRRGEE---ELFTTTHIANCMKKVIAIDLKQTIQ 142
Query: 110 YNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS 169
+ L I+A+ +G +GA I Y N + +
Sbjct: 143 VDEDLQIRAYYAGHVLGAVMVYAKMGDAAIVYTGDYNMTTDRHL---------------- 186
Query: 170 DLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVE------EMEKLAFICSCAIDSV 223
ID+ +L+ S S Y ++ E E L + C V
Sbjct: 187 ------GAAKIDRLQL--------DLLISESTYATTIRGSKYPREREFLQAVHKC----V 228
Query: 224 KAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQ 283
GG LIP +G +L + + E ++K+PIY S + + Y + W +
Sbjct: 229 AGGGKALIPSFALGRAQELCMLLDDYWERMNIKVPIYFSSGLTIQANMYYKMLISWTSQN 288
Query: 284 RQEKLFSGDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHL 342
+EK + +P F +VK IH P PC++F+ L G ++ +
Sbjct: 289 VKEKHNTHNPFDFKNVKDFDRSLIHA-PG------------PCVLFAIPGMLCAGLSLEV 335
Query: 343 LRRWSGDHNSLLVLENEVDAELA---VLPFKPISM------------KVLQCSFLSGKKL 387
+ W+ +L+ L A ++ KP ++ KV Q +F
Sbjct: 336 FKHWAPSPLNLVALLGYSVAGTVGHKLMAGKPTTVDLHNGTKVDVRCKVHQVAFSPHTDA 395
Query: 388 QKVQPLLKILQPKLVLF 404
+ + L K L PK V+
Sbjct: 396 KGIMDLTKFLSPKNVVL 412
>gi|379005388|ref|YP_005261060.1| universal KH-domain/beta-lactamase-domain protein [Pyrobaculum
oguniense TE7]
gi|375160841|gb|AFA40453.1| universal archaeal KH-domain/beta-lactamase-domain protein
[Pyrobaculum oguniense TE7]
Length = 635
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEW 279
++V GG VLIP G ++L + M+ + ++PIY+ + E L Y P +
Sbjct: 394 ETVSKGGKVLIPAFSTGRGQEILYVLNKMMDGGLVPRVPIYVDGMIVETLNVYL-MYPHY 452
Query: 280 LCKQRQEKLFSGDPLFAHVK--LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLG 337
L + E+++ G F +I ++ V ++ + +EP I+ +PH L G
Sbjct: 453 LNPEVAEEIYGGVNPFTTSGNVVIVDRAKRVEDRINQVAKIAQSEEPAIIIAPHGMLNGG 512
Query: 338 PTIHLLRRWSGDHNSLLVL 356
P + + + D + LV
Sbjct: 513 PVLDYFAQLAPDDKNKLVF 531
>gi|9280039|dbj|BAB01576.1| unnamed protein product [Macaca fascicularis]
Length = 328
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 62/134 (46%), Gaps = 12/134 (8%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 280
++V+ GG VLIP+ +G +L + F E +LK+PIY + + E+ Y W
Sbjct: 163 ETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPWT 222
Query: 281 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 340
++ ++ F + + K I F + + P +VF+ L G ++
Sbjct: 223 NQKIRKT-------FVQRNMFEFKHIKAF-----DRAFADNPGPMVVFATPGMLHAGQSL 270
Query: 341 HLLRRWSGDHNSLL 354
+ R+W+G+ +++
Sbjct: 271 QIFRKWAGNEKNMV 284
>gi|449528453|ref|XP_004171219.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 2-like, partial [Cucumis
sativus]
Length = 501
Score = 45.4 bits (106), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 61/135 (45%), Gaps = 7/135 (5%)
Query: 222 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLC 281
+++A G+VL+P++ G L+L++ + + E SL PI+ ++ VA + Y + EW+
Sbjct: 225 TLRANGNVLLPVDTAGRVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMS 284
Query: 282 KQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIH 341
+ F H + HV ++ +L P +V + SL G +
Sbjct: 285 DTIAKS-------FEHTRNNAFLLKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHD 337
Query: 342 LLRRWSGDHNSLLVL 356
W+ D +L++
Sbjct: 338 XFVDWAMDAKNLVLF 352
>gi|150399442|ref|YP_001323209.1| beta-lactamase domain-containing protein [Methanococcus vannielii
SB]
gi|150012145|gb|ABR54597.1| beta-lactamase domain protein [Methanococcus vannielii SB]
Length = 421
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 91/205 (44%), Gaps = 31/205 (15%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEW 279
++++ GG V+IP+ VG +++ I +M+ +LK +PIY+ S+ + Y EW
Sbjct: 204 ETIENGGKVIIPVFAVGRSQEIIVVINNYMKSGALKEVPIYVNGSLTHTIGMYMG-YSEW 262
Query: 280 LCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPT 339
L + +K E +I+ F + + +EPCI+ S ++ GP
Sbjct: 263 LNPK--------------IKNTIENRINPFGNLIKNSDEVFNKEPCIIISTSGMVQGGPI 308
Query: 340 IHLLRRWSGDHNSLLVLENEVDAELA---------VLPFK---PISMKVLQCSFLSGKKL 387
+ L N L++ + + + + PFK P++ V++ F +
Sbjct: 309 LQYLSLLKNPKNKLILTGYQAEGTIGRSLEEGVKEITPFKRAIPVNGTVIKVEFSAHADY 368
Query: 388 QK-VQPLLKILQPK--LVLFPEEWR 409
++ L KI +PK +V+ E ++
Sbjct: 369 NSLIRYLKKIPEPKKAIVMHGERYQ 393
>gi|240103777|ref|YP_002960086.1| RNA-metabolising metallo-beta-lactamase, beta-CASP family protein
[Thermococcus gammatolerans EJ3]
gi|239911331|gb|ACS34222.1| RNA-metabolising metallo-beta-lactamase, beta-CASP family protein
[Thermococcus gammatolerans EJ3]
Length = 651
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 79/173 (45%), Gaps = 21/173 (12%)
Query: 200 SNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPI 259
++Y +E EK + ++K GG VLIP VG +++ + + + +PI
Sbjct: 399 NDYQMPRDEAEKR--LIEVIHHTIKRGGKVLIPAMAVGRAQEIMMVLEEYARVGGIDVPI 456
Query: 260 YIISSVAEELLAYTNTIPEWLCKQRQEKLFSG------DPLFAHVKLIKEKKIHVFPAVH 313
Y+ + E +T PE+L ++ +E++F +P+F V +E++
Sbjct: 457 YLDGMIWEATAIHT-AYPEYLSRRLREQIFHEGYNPFLNPIFKSVANSRERQD------- 508
Query: 314 SPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 365
+++ EP I+ + L GP++ ++ + D NS++ + + + L
Sbjct: 509 ----IIDSGEPAIIIATSGMLVGGPSVEYFKQLAPDPKNSIIFVSYQAEGTLG 557
>gi|347522769|ref|YP_004780339.1| KH-domain/beta-lactamase-domain containing protein [Pyrolobus
fumarii 1A]
gi|343459651|gb|AEM38087.1| KH-domain/beta-lactamase-domain protein [Pyrolobus fumarii 1A]
Length = 649
Score = 45.4 bits (106), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 227 GSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQ 285
G VLIP+ VG +++ I ++ L K+PIY I + +E+ A T PE+L +
Sbjct: 409 GKVLIPVLAVGRAQEIILVIVDAIQKGYLRKVPIY-IDGMIDEVTAIHLTYPEYLAPSLR 467
Query: 286 EKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRR 345
+K+ G+ F LIK + + ++N EP ++ + L GP++ +
Sbjct: 468 KKILYGENPFTAEFLIKVE------GAQMREEIINSSEPAVIIATSGMLNGGPSVEYFKN 521
Query: 346 WSGDH-NSLLVLENEVDAELA 365
+ D N+L+ + +V L
Sbjct: 522 LAHDEKNTLIFVSYQVKGTLG 542
>gi|449549925|gb|EMD40890.1| hypothetical protein CERSUDRAFT_111471 [Ceriporiopsis subvermispora
B]
Length = 934
Score = 45.4 bits (106), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 76/197 (38%), Gaps = 20/197 (10%)
Query: 88 CIAHVKDCISKVQTLRFGEEACYNGI---LIIKAFSSGLDIGACNW-IISGAKGNIAYIS 143
I V D + LR+ + G L I F++G +G W I S G I Y
Sbjct: 170 TIQEVHDAFDSINVLRYSQPCHLQGKCQGLTIIPFNAGHTLGGTIWKIRSPTAGTILYAV 229
Query: 144 GSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYD 203
N H +D G+ LI ++ F + ++ +
Sbjct: 230 DMNHMREHHLD-------GTVLIRQANAGG---------GVFESLARPDLFITDAERAHV 273
Query: 204 ESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIIS 263
+ +++A + C ++ + S+L+P + L+LL + S LK PI ++S
Sbjct: 274 TTARRKDRVAALLDCVTATLTSRNSLLLPCDSSTRVLELLVLLDQHWNYSRLKFPICLLS 333
Query: 264 SVAEELLAYTNTIPEWL 280
E+L + ++ EWL
Sbjct: 334 RTGREMLTFVRSMMEWL 350
>gi|449460766|ref|XP_004148116.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Cucumis sativus]
Length = 649
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 71/370 (19%), Positives = 138/370 (37%), Gaps = 61/370 (16%)
Query: 53 SGPQWMKWEELELLPSAL---RKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEAC 109
+GP +M + + L P L RK+ + G H+ +C+ KV + +
Sbjct: 86 NGPIYMTYPTMALAPITLEDYRKVMVDRRGEAEQFTND---HIMECLKKVVPVDLKQTIQ 142
Query: 110 YNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS 169
+ L I+A+ +G +GA + + Y N + DL++
Sbjct: 143 VDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRMQLDLLI-- 200
Query: 170 DLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSV 229
TE ++ D S Y E E L + +C + +GG V
Sbjct: 201 -------TESTYATTIRD------------SKY---AREREFLKAVHNC----LASGGKV 234
Query: 230 LIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLF 289
LIP +G +L + + E +LK PIY+ + + + Y + W ++ +E
Sbjct: 235 LIPTFALGRAQELCVLLDDYWERMNLKFPIYVSAGLTVQANMYYKMLISWTSQKVKETYT 294
Query: 290 SGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD 349
+ + K + F + +++ PC++F+ + G ++ + +RW+
Sbjct: 295 TRNAF-------DFKNVQKF-----DRSMIDAPGPCVLFATPGMISSGFSLEVFKRWAPS 342
Query: 350 HNSLLVLENEVDAELA---VLPFKP------------ISMKVLQCSFLSGKKLQKVQPLL 394
+L+ L A ++ KP + +V Q +F + + L+
Sbjct: 343 KLNLITLPGYCVAGTVGHKLMSGKPTKIDLDKVTQIDVQCQVHQLAFSPHTDSKGIMDLV 402
Query: 395 KILQPKLVLF 404
K L PK V+
Sbjct: 403 KFLSPKHVIL 412
>gi|256810348|ref|YP_003127717.1| KH-domain/beta-lactamase-domain-containing protein
[Methanocaldococcus fervens AG86]
gi|256793548|gb|ACV24217.1| KH-domain/beta-lactamase-domain protein [Methanocaldococcus fervens
AG86]
Length = 634
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 14/140 (10%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 280
++ + GG VLIP+ VG +L+ + P+Y+ + E +T PE+L
Sbjct: 401 ETTEKGGKVLIPVFGVGRAQELMLVLEEGYNQGIFNAPVYLDGMIWEATAIHT-AYPEYL 459
Query: 281 CKQRQEKLF-SGDPLFAHVKLIKEKKIHVFPAVHSP---KLLMNWQEPCIVFSPHWSLRL 336
K+ ++K+F GD F VF V S + +++ EPCI+ + L
Sbjct: 460 SKEMRQKIFHEGDNPFLS---------EVFKRVGSTNERRKVIDSDEPCIILATSGMLTG 510
Query: 337 GPTIHLLRRWSGDHNSLLVL 356
GP++ L+ + D + ++
Sbjct: 511 GPSVEYLKHLAPDEKNAIIF 530
>gi|145590331|ref|YP_001152333.1| beta-lactamase domain-containing protein [Pyrobaculum arsenaticum
DSM 13514]
gi|145282099|gb|ABP49681.1| beta-lactamase domain protein [Pyrobaculum arsenaticum DSM 13514]
Length = 635
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEW 279
++V GG VLIP G ++L + M+ + ++PIY+ + E L Y P +
Sbjct: 394 ETVSKGGKVLIPAFSTGRGQEILYILNKMMDGGLVPRVPIYVDGMIVETLNVYL-MYPHY 452
Query: 280 LCKQRQEKLFSGDPLFAHVK--LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLG 337
L + E+++ G F +I ++ V ++ + +EP I+ +PH L G
Sbjct: 453 LNPEVAEEIYGGVNPFTTSGNVVIVDRAKRVEDRINQVAKIAQSEEPAIIIAPHGMLNGG 512
Query: 338 PTIHLLRRWSGDHNSLLVL 356
P + + + D + LV
Sbjct: 513 PVLDYFAQLAPDDKNKLVF 531
>gi|171184545|ref|YP_001793464.1| beta-lactamase domain-containing protein [Pyrobaculum neutrophilum
V24Sta]
gi|170933757|gb|ACB39018.1| beta-lactamase domain protein [Pyrobaculum neutrophilum V24Sta]
Length = 634
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEW 279
++V GG VLIP G ++L + +E + ++P+Y+ + E L AY P +
Sbjct: 393 EAVSRGGKVLIPAFSTGRGQEILYILNKMIEGGLIPRVPVYVDGMIVETLNAYL-MYPHY 451
Query: 280 LCKQRQEKLFSGDPLFAHVK--LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLG 337
L + E+++ G F +I ++ V ++ + +EP ++ +PH L G
Sbjct: 452 LNPEVAEEVYGGVNPFTTSGSVVIVDRAKRVEDRINQVAKIAQSEEPAVIIAPHGMLNGG 511
Query: 338 PTIHLLRRWSGDHNSLLVL 356
P + + + D + LV
Sbjct: 512 PVVDYFSQLAHDPRNKLVF 530
>gi|261403765|ref|YP_003247989.1| beta-lactamase [Methanocaldococcus vulcanius M7]
gi|261370758|gb|ACX73507.1| beta-lactamase domain protein [Methanocaldococcus vulcanius M7]
Length = 421
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 143/345 (41%), Gaps = 67/345 (19%)
Query: 92 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 151
+++ +S V+ L + EE N + K +++G +G+ + + I Y N
Sbjct: 101 IQNAMSSVECLNYYEERSINDNIKFKFYNAGHILGSASIYLEVDGKKILYTGDINENVSR 160
Query: 152 AM---DFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEE 208
+ D D+ I D+++ S+ S D+ + + + EE+ ++ N
Sbjct: 161 TLLSADTDFDEI---DVLIVE--STYGSPLDVKPARKTLERQLIEEIAETIEN------- 208
Query: 209 MEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAE 267
GG V+IP+ +G ++L + +M +L ++PIY S+
Sbjct: 209 -----------------GGKVIIPVFAIGRAQEILLILNNYMRSGNLTEVPIYTDGSLIH 251
Query: 268 E---LLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEP 324
++YTN WL + + + +G F +K + L+ N +EP
Sbjct: 252 ATAVYMSYTN----WLNPKIKNMIENGINPFGEIKKADDN------------LVFN-KEP 294
Query: 325 CIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL----ENEVDAEL-----AVLPFK---PI 372
CI+ S ++ GP + L+ N L++ E + EL + PFK PI
Sbjct: 295 CIIVSTSGMVQGGPILKYLKLLKDPKNKLILTGYQAEGTIGRELEEGAEEIQPFKNKIPI 354
Query: 373 SMKVLQCSFLS-GKKLQKVQPLLKILQP-KLVLFPEEWRTHVSFS 415
+ KV++ F + G V+ + KI +P K ++ E +SF+
Sbjct: 355 NGKVVKIEFSAHGDYNSLVRYIKKIPKPEKAIVMHGERYQALSFA 399
>gi|119872614|ref|YP_930621.1| beta-lactamase domain-containing protein [Pyrobaculum islandicum
DSM 4184]
gi|119674022|gb|ABL88278.1| beta-lactamase domain protein [Pyrobaculum islandicum DSM 4184]
Length = 640
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEW 279
++V GG VLIP G ++L + +E + ++P+Y+ + E L AY P +
Sbjct: 399 EAVSRGGKVLIPAFSTGRGQEILYILNKMIEGGLIPRVPVYVDGMIVETLNAYL-MYPHY 457
Query: 280 LCKQRQEKLFSGDPLFAHVK--LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLG 337
L + E+++ G F +I ++ V ++ + +EP ++ +PH L G
Sbjct: 458 LNPEVAEEIYGGVNPFTTSGSVVIVDRAKRVEDRINQVAKIAQSEEPAVIIAPHGMLNGG 517
Query: 338 PTIHLLRRWSGDHNSLLVL 356
P + + + D + LV
Sbjct: 518 PVVDYFSQLAHDPRNKLVF 536
>gi|333910570|ref|YP_004484303.1| beta-lactamase domain-containing protein [Methanotorris igneus Kol
5]
gi|333751159|gb|AEF96238.1| beta-lactamase domain protein [Methanotorris igneus Kol 5]
Length = 419
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 95/211 (45%), Gaps = 32/211 (15%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEW 279
++++ GG V+IP+ +G ++L I ++ LK +P+Y+ S+ Y + + +W
Sbjct: 203 ETIENGGKVIIPVFAIGRAQEILLIINNYIRSGKLKDVPVYVDGSLIHATGIYMSYL-DW 261
Query: 280 LCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPT 339
L + +K + E +++ F + + +EPCI+ S ++ GP
Sbjct: 262 LNPK--------------LKNMVENRVNPFGELKKADNSVFNKEPCIIISTSGMVQGGPV 307
Query: 340 IHLLRRWSGDHNSLLVLENEVDAELA---------VLPFK---PISMKVLQCSFLS-GKK 386
+ L N L++ + + L + PFK P+ KV++ F + G
Sbjct: 308 LQYLSLLKSPKNKLILTGYQAEGTLGRELEEGAEEITPFKNKIPVRGKVVKIEFSAHGDY 367
Query: 387 LQKVQPLLKILQPK--LVLFPEEWRTHVSFS 415
V+ + KI PK V+ E ++T +SF+
Sbjct: 368 NSLVRYIKKIPTPKKAFVVHGERYQT-LSFA 397
>gi|14591202|ref|NP_143278.1| mRNA 3'-end processing factor [Pyrococcus horikoshii OT3]
gi|294979445|pdb|3AF5|A Chain A, The Crystal Structure Of An Archaeal Cpsf Subunit, Ph1404
From Pyrococcus Horikoshii
gi|294979446|pdb|3AF6|A Chain A, The Crystal Structure Of An Archaeal Cpsf Subunit, Ph1404
From Pyrococcus Horikoshii Complexed With Rna-Analog
gi|3257827|dbj|BAA30510.1| 651aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 651
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 75/162 (46%), Gaps = 13/162 (8%)
Query: 207 EEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVA 266
EE EK + +++K GG VLIP VG +++ + + +++PIY+ +
Sbjct: 406 EEAEKR--LIEVIHNTIKRGGKVLIPAMAVGRAQEVMMVLEEYARIGGIEVPIYLDGMIW 463
Query: 267 EELLAYTNTIPEWLCKQRQEKLFSG--DPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEP 324
E +T PE+L ++ +E++F +P + + H + +++ EP
Sbjct: 464 EATAIHT-AYPEYLSRRLREQIFKEGYNPFLSEI-------FHPVANSRERQDIIDSNEP 515
Query: 325 CIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 365
I+ + L GP++ ++ + D NS++ + + + L
Sbjct: 516 AIIIASSGMLVGGPSVEYFKQLAPDPKNSIIFVSYQAEGTLG 557
>gi|357160194|ref|XP_003578687.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
2-like [Brachypodium distachyon]
Length = 738
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 106/287 (36%), Gaps = 76/287 (26%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
M + LP+ + G SA +Y+TE R+G L M Y F +W
Sbjct: 66 MHLGALPYAMKHLGLSAPVYVTEPVFRLGLLTM---------YDYFLS----------RW 106
Query: 61 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYN----GILII 116
+ + L I V L++ + N GI+I
Sbjct: 107 QVADFDLFTLDDI-------------------DAAFQNVVRLKYSQNHLLNDKGEGIVIA 147
Query: 117 KAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRA---IQGSDLILYSDLSS 173
S L +G W I+ ++ Y A+DF++R + G+ L
Sbjct: 148 PHVSGHL-LGGTVWKITKDGEDVVY----------AVDFNHRKERHLNGTAL-------- 188
Query: 174 LDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPI 233
SF + N+L+N + + + FI S + + +GGSVL+P+
Sbjct: 189 ---------GSFVRPAVLITDAYNALNN--QVYKRQQDQDFIDSM-VKVLASGGSVLLPV 236
Query: 234 NRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 280
+ G L+LL + + L PIY +++V+ + Y + EW+
Sbjct: 237 DTAGRVLELLLIMEQYWAQRHLVYPIYFLTNVSTSTVDYVKSFLEWM 283
>gi|312135668|ref|YP_004003006.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor
owensensis OL]
gi|311775719|gb|ADQ05206.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor
owensensis OL]
Length = 821
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 152/370 (41%), Gaps = 80/370 (21%)
Query: 65 LLPSALRKIALGEDGSELGGGCPCIA--HVKDCISKVQTLRFGEEACYNGILIIKA--FS 120
LL +LR + + ED P A +V+D + + TL +G + + I+ F
Sbjct: 92 LLYDSLRIMEIAEDE------IPIYAEKNVEDLLDR--TLTYGFNYTFEPVEGIRVTFFP 143
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQG--SDLILYSDLSSLDSTE 178
+G +GA I +G+I Y +F++ + D ++ D++
Sbjct: 144 AGHILGASMIFIQTQEGSILYTG--DFSADKQLTVDRASVPKIRPDIV------------ 189
Query: 179 DIDQSSFSD---DNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINR 235
I +S++ D N ++EE E+L + + + GG VLIP
Sbjct: 190 -ICESTYGDRLHTNRSFEE---------------ERL---FNTIFEVISQGGKVLIPAFA 230
Query: 236 VGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLF 295
+G +++ + +M+ + ++I V E + Y N P +L + +++ G+ +F
Sbjct: 231 IGRAQEVILILRNYMKKRKVSFNVFIDGMVREVIRVYRNN-PTYLSSRYYKRVLKGEEIF 289
Query: 296 --AHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSL 353
++ ++ +KK + +++ +PC++ S L GP++ + N+L
Sbjct: 290 LADNINVVSDKK--------QREEIISSSDPCVIISSSGMLTGGPSLFYAEKIVQSQNAL 341
Query: 354 LVLENEVDA--------ELAVLP--FKPISM---------KVLQCSFLSGKKLQKVQPLL 394
+ + D ELA LP K I++ +V + + K+ L
Sbjct: 342 VAITGYQDEEAPGRKLLELAELPESEKKINLNGKEYEVKCRVEKYGLSAHSDRDKILGFL 401
Query: 395 KILQPKLVLF 404
L+P+ V+F
Sbjct: 402 ATLRPRTVIF 411
>gi|221055463|ref|XP_002258870.1| RNA-metabolising metallo-beta-lactamase [Plasmodium knowlesi strain
H]
gi|193808940|emb|CAQ39643.1| RNA-metabolising metallo-beta-lactamase,putative [Plasmodium
knowlesi strain H]
Length = 914
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 129/332 (38%), Gaps = 64/332 (19%)
Query: 91 HVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASG 150
H+ CI KV L+ E G + I + +G +GAC + I ++ Y
Sbjct: 202 HIYSCIGKVVGLQINE-TYEMGNMSITPYYAGHVLGACIYKIEVNNFSVIYTG------- 253
Query: 151 HAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEME 210
DY + L + + SL+ I +S+++ Y +
Sbjct: 254 -----DYNTVPDKHL-GSTKIPSLNPEIFISESTYA--------------TYVRPTRKAS 293
Query: 211 KLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELL 270
+L +C+ + V GG VLIP+ +G +L + + + PIY + E
Sbjct: 294 ELD-LCNLVHECVHKGGKVLIPVFAIGRAQELSILLDSYWRKMKINYPIYFGCGLTENAN 352
Query: 271 AYTNTIPEWL---CKQRQEK-LFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCI 326
Y W+ C +K LF FA++ P V++ ++ P +
Sbjct: 353 KYYRIYSSWVNSNCVSTDKKNLFD----FANIS----------PFVNN---YLDENRPMV 395
Query: 327 VFSPHWSLRLGPTIHLLRRWSGDHNSLLVL-----ENEVDAELAVLPFK---------PI 372
+F+ L G ++ + W+G N+L+VL + V +L + K +
Sbjct: 396 LFATPGMLHTGLSLKAFKAWAGSSNNLIVLPGYCVQGTVGHKLIMGERKISFDGSSYLNV 455
Query: 373 SMKVLQCSFLSGKKLQKVQPLLKILQPKLVLF 404
+ +++ SF + +Q L++ + P+ VLF
Sbjct: 456 ACRIIYLSFSAHADSNGIQQLIRHVLPQNVLF 487
>gi|430813604|emb|CCJ29043.1| unnamed protein product [Pneumocystis jirovecii]
gi|430813606|emb|CCJ29045.1| unnamed protein product [Pneumocystis jirovecii]
Length = 772
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 99/233 (42%), Gaps = 26/233 (11%)
Query: 92 VKDCISKVQTLRFGEEACYNGIL---IIKAFSSGLDIGACNWIISGAKGNIAYISGSNFA 148
+ + + TLR+ + +G L I A++SG +G W I+ NI Y N
Sbjct: 106 IDNAFDSIITLRYSQPISLSGKLNGISITAYNSGHSLGGTIWKITKDSENIVYCVNWN-- 163
Query: 149 SGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEE 208
H+ D + GS ILYS+ + LD+ I + D N SN +
Sbjct: 164 --HSKD---SHLNGS--ILYSNGTILDAL--IRPTILITDAIN--------SNISIPSRK 206
Query: 209 MEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEE 268
AF S +++ G+VLIP + L+ + + + +L+ PIY +S +
Sbjct: 207 KRTEAFFDSIK-NTLAQQGNVLIPTDAATRSLEFCWILDRYWKQHNLQYPIYFLSHTGNK 265
Query: 269 LLAYTNTIPEWLCKQRQEKLFSGDPL--FAHVKLIKEKKIHVFPAVHSPKLLM 319
++Y ++ EW+ + S + F +VK+I + V PK+++
Sbjct: 266 AISYAQSMIEWMSDSIISEYGSSGSVFEFTYVKVITN-EFQFLSMVSGPKVIL 317
>gi|378756880|gb|EHY66904.1| cleavage and polyadenylation specificity factor subunit 3
[Nematocida sp. 1 ERTm2]
Length = 501
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 84/207 (40%), Gaps = 41/207 (19%)
Query: 219 AIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISS-------VAEELLA 271
+ VK GG VLIP+ +G +L + E S L IPIY ++ + ++ +
Sbjct: 225 VVQCVKNGGKVLIPVFALGRAHELCLLLDTHWEKSKLSIPIYTSATLTHKANDIYKQFID 284
Query: 272 YTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPH 331
YT+ +R LF F HVK L + + P I+FS
Sbjct: 285 YTHEHIRNTMHKRN--LFD----FQHVKQFDSN-------------LASLEGPMILFSSP 325
Query: 332 WSLRLGPTIHLLRRWSGDHNSLL--------------VLENEVDAELAVLPFKPISMKVL 377
L GP++ + ++W GD +++ VL E+ + + P+ MKV
Sbjct: 326 GMLHSGPSLSIFKKWCGDPKNMVIFPGYCVRGTIGERVLNGASQIEVGGIVY-PVRMKVK 384
Query: 378 QCSFLSGKKLQKVQPLLKILQPKLVLF 404
F + + + L++ +P+ ++
Sbjct: 385 NMPFSAHADQKGILSLVQQCEPENIIL 411
>gi|237842097|ref|XP_002370346.1| RNA-metabolising metallo-beta-lactamase domain-containing protein
[Toxoplasma gondii ME49]
gi|211968010|gb|EEB03206.1| RNA-metabolising metallo-beta-lactamase domain-containing protein
[Toxoplasma gondii ME49]
Length = 1089
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 58/142 (40%), Gaps = 8/142 (5%)
Query: 215 ICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTN 274
C+ D++ GG VLIP+ VG +L + + E L+ PIY + E AY
Sbjct: 366 FCAVVHDTLTKGGKVLIPVFAVGRAQELCMLLENYWERMHLRFPIYFAGGMTERANAYYR 425
Query: 275 TIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSL 334
W + + DP A H+ P S L++ P ++ + L
Sbjct: 426 LYVHW---SKADANVDADPEDALRTAFSFP--HILPFQSS---LLSAPTPLVLLATPGML 477
Query: 335 RLGPTIHLLRRWSGDHNSLLVL 356
G + L+ W GD +L++L
Sbjct: 478 HGGLALKALKAWGGDPATLVLL 499
>gi|221502797|gb|EEE28511.1| RNA-metabolising metallo-beta-lactamase domain-containing protein,
putative [Toxoplasma gondii VEG]
Length = 1072
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 58/142 (40%), Gaps = 8/142 (5%)
Query: 215 ICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTN 274
C+ D++ GG VLIP+ VG +L + + E L+ PIY + E AY
Sbjct: 366 FCAVVHDTLTKGGKVLIPVFAVGRAQELCMLLENYWERMHLRFPIYFAGGMTERANAYYR 425
Query: 275 TIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSL 334
W + + DP A H+ P S L++ P ++ + L
Sbjct: 426 LYVHW---SKADANVDADPEDALRTAFSFP--HILPFQSS---LLSAPTPLVLLATPGML 477
Query: 335 RLGPTIHLLRRWSGDHNSLLVL 356
G + L+ W GD +L++L
Sbjct: 478 HGGLALKALKAWGGDPATLVLL 499
>gi|15668334|ref|NP_247130.1| putative mRNA 3'-end processing factor 3 [Methanocaldococcus
jannaschii DSM 2661]
gi|2495836|sp|Q57626.1|Y162_METJA RecName: Full=Uncharacterized protein MJ0162
gi|1590919|gb|AAB98146.1| putative mRNA 3'-end processing factor 3 [Methanocaldococcus
jannaschii DSM 2661]
Length = 421
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 98/213 (46%), Gaps = 35/213 (16%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEW 279
++++ GG V+IP+ +G ++L I ++ L+ +PIY S+ Y + I W
Sbjct: 204 ETIENGGKVIIPVFAIGRAQEILLIINNYIRSGKLRDVPIYTDGSLIHATAVYMSYI-NW 262
Query: 280 LCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP--KLLMNWQEPCIVFSPHWSLRLG 337
L + +K + E +I+ F + L+ N +EPCI+ S ++ G
Sbjct: 263 LNPK--------------IKNMVENRINPFGEIKKADESLVFN-KEPCIIVSTSGMVQGG 307
Query: 338 PTIHLLRRWSGDHNSLLVLENEVDAELA---------VLPFK---PISMKVLQCSFLS-G 384
P + L+ N L++ + + L + PFK PI KV++ F + G
Sbjct: 308 PVLKYLKLLKDPKNKLILTGYQAEGTLGRELEEGAKEIQPFKNKIPIRGKVVKIEFSAHG 367
Query: 385 KKLQKVQPLLKILQPK--LVLFPEEWRTHVSFS 415
V+ + KI +P+ +V+ E +++ +SF+
Sbjct: 368 DYNSLVRYIKKIPKPEKAIVMHGERYQS-LSFA 399
>gi|157876175|ref|XP_001686447.1| putative cleavage and polyadenylation specificity factor
[Leishmania major strain Friedlin]
gi|68129521|emb|CAJ08064.1| putative cleavage and polyadenylation specificity factor
[Leishmania major strain Friedlin]
Length = 756
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 69/367 (18%), Positives = 136/367 (37%), Gaps = 88/367 (23%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ F ++++T A +++M + + R GA + +W++
Sbjct: 93 ALPYFCNQTSFKGRVFMTSATKAFYKMVMNDFL------RIGAGASDLVTSEWLQ----- 141
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
I +++T+ + EE NGI + F++G
Sbjct: 142 -----------------------------STIDRIETVEYHEEVTVNGI-SFQPFNAGHV 171
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS-DLSSLDSTEDIDQS 183
+GA +++ A Y +G R + G+++ YS D+ +ST I +
Sbjct: 172 LGAAMFMVDIAGMRALY-------TGDFSRVPDRHLLGAEVPPYSPDILIAESTNGIREL 224
Query: 184 SFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLL 243
++ + S D V+ GG L+P+ +G +LL
Sbjct: 225 ESREEREH----------------------LFTSSVHDVVRRGGRCLVPVFALGRAQELL 262
Query: 244 EQIAIFMECSS--LKIPIYIISSVAEELLA-YTNTIPEWLCKQRQEKLFSGDP-LFAHVK 299
+ F + IPIY SS+A+ + Y + + +Q+ +P +F +++
Sbjct: 263 LILEEFWDAHKELQNIPIYYASSLAQRCMKLYQTFVSAMNDRVKQQHANHHNPFVFKYIR 322
Query: 300 LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLEN 358
+ + K PC+V + L+ G ++ L RW GD N +++
Sbjct: 323 SLMDTKS------------FEDNGPCVVLASPGMLQSGISLELFERWCGDRRNGIIMAGY 370
Query: 359 EVDAELA 365
VD +A
Sbjct: 371 CVDGTIA 377
>gi|320170221|gb|EFW47120.1| integrator complex subunit 11 [Capsaspora owczarzaki ATCC 30864]
Length = 661
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 103/267 (38%), Gaps = 40/267 (14%)
Query: 90 AHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFAS 149
A++K C+ KV + E + + IKA+ +G +GA + + ++ Y N
Sbjct: 123 ANIKACMKKVIAVNLHESVRVDDEIEIKAYYAGHVLGAAMFHVRVGSESVVYTGDFNMTP 182
Query: 150 GHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEM 209
+ + DL++ TE ++ D N E
Sbjct: 183 DRHLGAAWIDRCRPDLLI---------TESTYATTIRDSKRN---------------REG 218
Query: 210 EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEEL 269
E L I C V+ GG VLIP+ +G +L + + E L +P+Y + + +
Sbjct: 219 EFLRKIHEC----VEQGGKVLIPVFALGRAQELCILVETYWERLGLTVPVYFSAGLTAKA 274
Query: 270 LAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFS 329
Y W Q+ ++ F +F + K I F + ++ P ++F+
Sbjct: 275 NNYYKLFITW-TNQKIKRTFVERNMF------EFKHIKPF-----DRAFLDNPGPMVLFA 322
Query: 330 PHWSLRLGPTIHLLRRWSGDHNSLLVL 356
L G ++ R+W+ + ++++L
Sbjct: 323 TPGMLHAGMSLDAFRKWAPNDKNMVIL 349
>gi|330835859|ref|YP_004410587.1| beta-lactamase domain-containing protein [Metallosphaera cuprina
Ar-4]
gi|329567998|gb|AEB96103.1| beta-lactamase domain-containing protein [Metallosphaera cuprina
Ar-4]
Length = 638
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 25/154 (16%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEW 279
+++ GG VLIP+ VG +++ I M+ + ++P+Y+ + + +E+ A PEW
Sbjct: 400 NTINRGGKVLIPVLAVGRGQEIMLVINDAMKKKMIPEVPVYV-TGLFDEVTAIHTAYPEW 458
Query: 280 LCKQ-------RQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHW 332
L K+ + E F+ D LF ++ +E H EP I+ +
Sbjct: 459 LGKEVRDSILFKDENPFTSD-LFKRIEGYREDVAH--------------GEPSIILATSG 503
Query: 333 SLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 365
L GP + + + D NSL+ + + + L
Sbjct: 504 MLNGGPAVEFFKELAPDSRNSLVFVSYQAEGTLG 537
>gi|221482308|gb|EEE20663.1| RNA-metabolising metallo-beta-lactamase domain-containing protein,
putative [Toxoplasma gondii GT1]
Length = 1090
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 58/142 (40%), Gaps = 8/142 (5%)
Query: 215 ICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTN 274
C+ D++ GG VLIP+ VG +L + + E L+ PIY + E AY
Sbjct: 374 FCAVVHDTLTKGGKVLIPVFAVGRAQELCMLLENYWERMHLRFPIYFAGGMTERANAYYR 433
Query: 275 TIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSL 334
W + + DP A H+ P S L++ P ++ + L
Sbjct: 434 LYVHW---SKADANVDADPEDALRTAFSFP--HILPFQSS---LLSAPTPLVLLATPGML 485
Query: 335 RLGPTIHLLRRWSGDHNSLLVL 356
G + L+ W GD +L++L
Sbjct: 486 HGGLALKALKAWGGDPATLVLL 507
>gi|289192183|ref|YP_003458124.1| KH-domain/beta-lactamase-domain protein [Methanocaldococcus sp.
FS406-22]
gi|288938633|gb|ADC69388.1| KH-domain/beta-lactamase-domain protein [Methanocaldococcus sp.
FS406-22]
Length = 634
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 280
++ GG VLIP+ VG +L+ + P+Y+ + E +T PE+L
Sbjct: 401 ETTDKGGKVLIPVFGVGRAQELMLVLEEGYNQGIFNAPVYLDGMIWEATAIHT-AYPEYL 459
Query: 281 CKQRQEKLF-SGDPLFAHVKLIKEKKIHVFPAVHSP---KLLMNWQEPCIVFSPHWSLRL 336
K+ ++K+F GD F VF V S + +++ EPC++ + L
Sbjct: 460 SKEMRQKIFHEGDNPFLS---------EVFKRVGSTNERRRVIDSDEPCVILATSGMLTG 510
Query: 337 GPTIHLLRRWSGDHNSLLVL 356
GP++ L+ + D + ++
Sbjct: 511 GPSVEYLKHLAPDEKNAIIF 530
>gi|440800837|gb|ELR21870.1| integrator complex subunit 9, putative, partial [Acanthamoeba
castellanii str. Neff]
Length = 229
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 92 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASG- 150
V++ ISKV + F + G++ SSG +G+ NWI+ + Y++ S+ + G
Sbjct: 25 VEEAISKVHRVSFHQHINLLGVMEAVPVSSGFALGSANWILRTDNEKVIYVADSSLSPGR 84
Query: 151 HAMDFDYRAIQGSDLILYSDLS 172
H D D+++ + LS
Sbjct: 85 HPQPLDNTLFSNCDMMIMTSLS 106
>gi|332159620|ref|YP_004424899.1| mRNA 3'-end processing factor [Pyrococcus sp. NA2]
gi|331035083|gb|AEC52895.1| mRNA 3'-end processing factor, putative [Pyrococcus sp. NA2]
Length = 651
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 73/162 (45%), Gaps = 13/162 (8%)
Query: 207 EEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVA 266
EE EK + ++K GG VLIP VG +++ + + + +PIY+ +
Sbjct: 406 EEAEKR--LIEVIHKTIKRGGKVLIPAMAVGRAQEVMMVLEEYARIGGIDVPIYLDGMIW 463
Query: 267 EELLAYTNTIPEWLCKQRQEKLFSG--DPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEP 324
E +T PE+L ++ +E++F +P + + H + +++ EP
Sbjct: 464 EATAIHT-AYPEYLSRRLREQIFKEGYNPFLSEI-------FHPVANSRERQDIIDSNEP 515
Query: 325 CIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 365
I+ + L GP++ ++ + D NS++ + + + L
Sbjct: 516 AIIIASSGMLVGGPSVEYFKQLAPDPKNSIIFVSYQAEGTLG 557
>gi|261402298|ref|YP_003246522.1| KH-domain/beta-lactamase-domain-containing protein
[Methanocaldococcus vulcanius M7]
gi|261369291|gb|ACX72040.1| KH-domain/beta-lactamase-domain protein [Methanocaldococcus
vulcanius M7]
Length = 634
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 280
++ GG VLIP+ VG +L+ + P+Y+ + E +T PE+L
Sbjct: 401 ETTDKGGKVLIPVFGVGRAQELMLVLEEGYNQGIFNAPVYLDGMIWEATAIHT-AYPEYL 459
Query: 281 CKQRQEKLF-SGDPLFAHVKLIKEKKIHVFPAVHSP---KLLMNWQEPCIVFSPHWSLRL 336
K+ ++K+F GD F VF V S + +++ EPC++ + L
Sbjct: 460 SKEMRQKIFHEGDNPFLS---------EVFKRVGSTNERRKVIDSDEPCVILATSGMLTG 510
Query: 337 GPTIHLLRRWSGDHNSLLVL 356
GP++ L+ + D + ++
Sbjct: 511 GPSVEYLKHLAPDEKNAIIF 530
>gi|254168266|ref|ZP_04875112.1| RNA-metabolising metallo-beta-lactamase family [Aciduliprofundum
boonei T469]
gi|254168398|ref|ZP_04875243.1| RNA-metabolising metallo-beta-lactamase family [Aciduliprofundum
boonei T469]
gi|289595800|ref|YP_003482496.1| KH-domain/beta-lactamase-domain protein [Aciduliprofundum boonei
T469]
gi|197622679|gb|EDY35249.1| RNA-metabolising metallo-beta-lactamase family [Aciduliprofundum
boonei T469]
gi|197622775|gb|EDY35344.1| RNA-metabolising metallo-beta-lactamase family [Aciduliprofundum
boonei T469]
gi|289533587|gb|ADD07934.1| KH-domain/beta-lactamase-domain protein [Aciduliprofundum boonei
T469]
Length = 647
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 27/186 (14%)
Query: 207 EEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSV 265
E E+L + D GG +LIP+ VG +++ + FM L ++PIY+ +
Sbjct: 403 EAAERLKDVVMRTYDK---GGKILIPVFAVGRSQEVMLVLESFMRNGELPEMPIYLDGMI 459
Query: 266 AEELLAYTNTIPEWLCKQRQEKLFSG--DPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQE 323
E + PE+L K +E +F +P + + H +V + +++ +
Sbjct: 460 WEATTIHA-AYPEYLNKDLRELIFQKKENPFLSPI-------FHRVESVERREEVISSSD 511
Query: 324 PCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLV-------------LENEVDAELAVLPFK 370
P IV S + GP + + W+ D + LV ++N + L L K
Sbjct: 512 PLIVLSTSGMMNGGPVLEYFKHWADDPRNTLVFVGYQAVGTLGRRIQNGLKEVLMSLGGK 571
Query: 371 PISMKV 376
P ++KV
Sbjct: 572 PFTVKV 577
>gi|302872375|ref|YP_003841011.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor
obsidiansis OB47]
gi|302575234|gb|ADL43025.1| RNA-metabolising metallo-beta-lactamase [Caldicellulosiruptor
obsidiansis OB47]
Length = 821
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 130/310 (41%), Gaps = 61/310 (19%)
Query: 65 LLPSALRKIALGEDGSELGGGCPCIA--HVKDCISKVQTLRFGEEACYNGILIIKA--FS 120
LL +LR + + ED P A +V+D + + TL +G + + I+ F
Sbjct: 92 LLYDSLRIMEIAEDE------IPIYAEKNVEDLLDR--TLTYGFNYTFEPVEGIRVTFFP 143
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQG--SDLILYSDLSSLDSTE 178
+G +GA I +G+I Y +F++ + D ++ D++
Sbjct: 144 AGHILGASMIFIQTQEGSILYTG--DFSADKQLTVDKASVPKIRPDIV------------ 189
Query: 179 DIDQSSFSD---DNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINR 235
I +S++ D N ++EE E+L + + + GG VLIP
Sbjct: 190 -ICESTYGDRLHTNRSFEE---------------ERL---FNTIYEVISQGGKVLIPAFA 230
Query: 236 VGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLF 295
+G +++ + +M+ + I+I V E + Y N P +L + +++ G+ +F
Sbjct: 231 IGRAQEVILILRNYMKKRKVSFNIFIDGMVREVIKVYRNN-PTYLSSRYYKRVLKGEEIF 289
Query: 296 --AHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSL 353
++ ++ +KK + +++ +PC++ S L GP++ + N+L
Sbjct: 290 LADNINVVSDKK--------QREEIISSSDPCVIISSSGMLTGGPSVFYAEKIVQSPNAL 341
Query: 354 LVLENEVDAE 363
+ + D E
Sbjct: 342 IAITGYQDEE 351
>gi|47229058|emb|CAG03810.1| unnamed protein product [Tetraodon nigroviridis]
Length = 698
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 62/134 (46%), Gaps = 12/134 (8%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 280
++++ GG VLIP+ +G +L + F E +LK PIY + + E+ Y W
Sbjct: 295 ETIERGGKVLIPVFALGRAQELCILLETFWERMNLKAPIYFSTGLTEKANHYYKLFITWT 354
Query: 281 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 340
++ ++ F + + K I F ++ + P +VF+ L G ++
Sbjct: 355 NQKIRKT-------FVQRNMFEFKHIKAFDRSYA-----DNPGPMVVFATPGMLHAGQSL 402
Query: 341 HLLRRWSGDHNSLL 354
+ ++W+G+ +++
Sbjct: 403 QIFKKWAGNEKNMV 416
>gi|261327437|emb|CBH10412.1| cleavage and polyadenylation specificity factor subunit, putative
[Trypanosoma brucei gambiense DAL972]
Length = 770
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 139/371 (37%), Gaps = 96/371 (25%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ F +I++T A +++M + + R AE+ +W++
Sbjct: 106 ALPYFCEQTSFRGRIFMTSATKAFYKMVMNDFL------RIGASAEDIVNNEWLQ----- 154
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
I K++T+ + EE NGI + F++G
Sbjct: 155 -----------------------------STIEKIETVEYHEEVTVNGIHF-QPFNAGHV 184
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS-DLSSLDSTEDIDQS 183
+GA +++ A + Y +G R + G+++ YS D+ +ST I +
Sbjct: 185 LGAALFMVDIAGMKLLY-------TGDFSRVPDRHLLGAEVPPYSPDILIAESTNGIREL 237
Query: 184 SFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLL 243
E+ + + D VK GG L+P+ +G +LL
Sbjct: 238 E----------------------SREERESLFTTWVHDVVKGGGRCLVPVFALGRAQELL 275
Query: 244 EQIAIFMECSS--LKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLI 301
+ + E IPIY SS+A QR KL+ + ++
Sbjct: 276 LILEEYWEAHKELQHIPIYYASSLA----------------QRCMKLYQTFVSAMNDRVK 319
Query: 302 KEKKIH----VFPAVHSPKLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLL 354
K+ + H VF + S ++++ PC+V + L+ G ++ L RW GD N ++
Sbjct: 320 KQHENHRNPFVFKYIQSLLDTRSFEDTGPCVVLASPGMLQSGISLELFERWCGDKRNGII 379
Query: 355 VLENEVDAELA 365
V VD +A
Sbjct: 380 VAGYCVDGTIA 390
>gi|72387720|ref|XP_844284.1| cleavage and polyadenylation specificity factor subunit
[Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|62359436|gb|AAX79873.1| cleavage and polyadenylation specificity factor subunit, putative
[Trypanosoma brucei]
gi|70800817|gb|AAZ10725.1| cleavage and polyadenylation specificity factor subunit, putative
[Trypanosoma brucei brucei strain 927/4 GUTat10.1]
Length = 770
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 74/370 (20%), Positives = 136/370 (36%), Gaps = 94/370 (25%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ F +I++T A +++M + + R AE+ +W++
Sbjct: 106 ALPYFCEQTSFRGRIFMTSATKAFYKMVMNDFL------RIGASAEDIVNNEWLQ----- 154
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
I K++T+ + EE NGI + F++G
Sbjct: 155 -----------------------------STIEKIETVEYHEEVTVNGIHF-QPFNAGHV 184
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS-DLSSLDSTEDIDQS 183
+GA +++ A + Y +G R + G+++ YS D+ +ST I +
Sbjct: 185 LGAALFMVDIAGMKLLY-------TGDFSRVPDRHLLGAEVPPYSPDILIAESTNGIREL 237
Query: 184 SFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLL 243
E+ + + D VK GG L+P+ +G +LL
Sbjct: 238 E----------------------SREERESLFTTWVHDVVKGGGRCLVPVFALGRAQELL 275
Query: 244 EQIAIFMECSS--LKIPIYIISSVAEELLAYTNTIPEWL---CKQRQEKLFSGDPLFAHV 298
+ + E IPIY SS+A+ + T + K++ E
Sbjct: 276 LILEEYWEAHKELQHIPIYYASSLAQRCMKLYQTFVSAMNDRVKKQHEN----------- 324
Query: 299 KLIKEKKIHVFPAVHSPKLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLV 355
+ VF + S ++++ PC+V + L+ G ++ L RW GD N ++V
Sbjct: 325 ----HRNPFVFKYIQSLLDTRSFEDTGPCVVLASPGMLQSGISLELFERWCGDKRNGIIV 380
Query: 356 LENEVDAELA 365
VD +A
Sbjct: 381 AGYCVDGTIA 390
>gi|340383473|ref|XP_003390242.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-like [Amphimedon queenslandica]
Length = 726
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 66/329 (20%), Positives = 131/329 (39%), Gaps = 64/329 (19%)
Query: 96 ISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDF 155
+ K++ + F +E +GI A+++G +GA ++I A + Y
Sbjct: 183 MDKIEIINFHQEVDVSGIKF-TAYNAGHVLGAAMFMIEIAGVKVLYTG------------ 229
Query: 156 DYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEM--EKLA 213
D+ ++ L+ ++ N+ +++ S S Y + E ++ A
Sbjct: 230 DFSRVEDRHLMA------------------AEVPNSSPDILISESTYGTHIHEKREQREA 271
Query: 214 FICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--LKIPIYIISSVAEELLA 271
+ D V GG LIP+ +G +LL + + C IPIY SS+A++ +A
Sbjct: 272 RFTTKIHDIVTRGGHCLIPVFALGRAQELLLILDEYWSCHPELHDIPIYYASSLAKKCMA 331
Query: 272 YTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQE--PCIVFS 329
T + ++ + ++ +P VF + S K + N+ + PC++ +
Sbjct: 332 VYQTYIGAMNERIRRQIGISNPF-------------VFKHISSLKNIDNFDDIGPCVILA 378
Query: 330 PHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA---------VLPFK----PISMK 375
++ G + L W D N ++V V+ LA V+ P+ M
Sbjct: 379 SPGMMQSGLSRQLFESWCTDKRNGVVVAGYCVEGTLAKHILSEPSEVVTMNGQKLPLRMS 438
Query: 376 VLQCSFLSGKKLQKVQPLLKILQPKLVLF 404
V SF + ++ ++IL P ++
Sbjct: 439 VDYISFSAHTDYEQTSEFIRILNPPHIVL 467
>gi|15669421|ref|NP_248231.1| putative mRNA 3'-end processing factor 2 [Methanocaldococcus
jannaschii DSM 2661]
gi|2496166|sp|Q58633.1|Y1236_METJA RecName: Full=Uncharacterized protein MJ1236
gi|1591868|gb|AAB99240.1| putative mRNA 3'-end processing factor 2 [Methanocaldococcus
jannaschii DSM 2661]
Length = 634
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 280
++ GG VLIP+ VG +L+ + P+Y+ + E +T PE+L
Sbjct: 401 ETTDRGGKVLIPVFGVGRAQELMLVLEEGYNQGIFNAPVYLDGMIWEATAIHT-AYPEYL 459
Query: 281 CKQRQEKLF-SGDPLFAHVKLIKEKKIHVFPAVHSP---KLLMNWQEPCIVFSPHWSLRL 336
K+ ++K+F GD F VF V S + +++ EPC++ + L
Sbjct: 460 SKEMRQKIFHEGDNPFLS---------EVFKRVGSTNERRKVIDSDEPCVILATSGMLTG 510
Query: 337 GPTIHLLRRWSGDHNSLLVL 356
GP++ L+ + D + ++
Sbjct: 511 GPSVEYLKHLAPDEKNAIIF 530
>gi|45358944|ref|NP_988501.1| beta-lactamase-like protein [Methanococcus maripaludis S2]
gi|340624691|ref|YP_004743144.1| beta-lactamase-like protein [Methanococcus maripaludis X1]
gi|45047810|emb|CAF30937.1| Beta-lactamase-like:ATP/GTP-binding site motif A (P-loop)
[Methanococcus maripaludis S2]
gi|339904959|gb|AEK20401.1| beta-lactamase-like protein [Methanococcus maripaludis X1]
Length = 422
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 88/205 (42%), Gaps = 31/205 (15%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEW 279
+++ GG V+IP+ VG +++ I +M+ +LK +PIYI S+ Y +W
Sbjct: 204 ETIDNGGKVIIPVFAVGRSQEIIVVINNYMKSGALKEVPIYINGSLTHTTGMYMG-YSDW 262
Query: 280 LCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPT 339
L + + + E +I+ F + + +EPCI+ S ++ GP
Sbjct: 263 LNPKIKNAI--------------ENRINPFGNLIKGGDEVFSREPCIIISTSGMVQGGPV 308
Query: 340 IHLLRRWSGDHNSLLVLENEVDAELA---------VLPFK---PISMKVLQCSFLSGKKL 387
+ L N +++ + + + V PFK P++ KV++ F +
Sbjct: 309 LQYLSLLKNPRNKIILTGYQAEGTIGRSLEEGATEVKPFKRAIPVNGKVVKIEFSAHADY 368
Query: 388 QKVQPLL-KILQPK--LVLFPEEWR 409
+ + KI QP +V+ E ++
Sbjct: 369 NSLLRFMKKIPQPDKAIVMHGERYQ 393
>gi|66357778|ref|XP_626067.1| CPSF metallobeta-lactamase [Cryptosporidium parvum Iowa II]
gi|46227299|gb|EAK88249.1| CPSF metallobeta-lactamase [Cryptosporidium parvum Iowa II]
Length = 751
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 57/141 (40%), Gaps = 17/141 (12%)
Query: 216 CSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNT 275
C +K GG VLIP+ +G +L + I+ ++ PI+ S+ E+ +Y
Sbjct: 243 CEMVYSCLKRGGKVLIPVFAIGRAQELCILLEIYWRRMQIRFPIFFGGSMTEKANSYYQL 302
Query: 276 IPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLR 335
W + +F+ HV P K ++ P ++F+ L
Sbjct: 303 FTNWTNTPLADNIFTFP--------------HVLPY---DKSILTLSGPAVLFATPGMLH 345
Query: 336 LGPTIHLLRRWSGDHNSLLVL 356
G ++ + W+ D N+L ++
Sbjct: 346 TGLSLQAFKMWAPDSNNLTII 366
>gi|134045242|ref|YP_001096728.1| beta-lactamase domain-containing protein [Methanococcus maripaludis
C5]
gi|132662867|gb|ABO34513.1| beta-lactamase domain protein [Methanococcus maripaludis C5]
Length = 422
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 88/205 (42%), Gaps = 31/205 (15%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEW 279
+++ GG V+IP+ VG +++ I +M+ +LK +PIYI S+ Y +W
Sbjct: 204 ETIDNGGKVIIPVFAVGRSQEIIVVINNYMKSGALKEVPIYINGSLTHTTGMYMG-YSDW 262
Query: 280 LCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPT 339
L + + + E +I+ F + + +EPCI+ S ++ GP
Sbjct: 263 LNPKIKNAI--------------ENRINPFGNLIKGGDEVFSREPCIIISTSGMVQGGPV 308
Query: 340 IHLLRRWSGDHNSLLVLENEVDAELA---------VLPFK---PISMKVLQCSFLSGKKL 387
+ L N +++ + + + V PFK P++ KV++ F +
Sbjct: 309 LQYLSLLKNPRNKIILTGYQAEGTIGRSLEEGATEVKPFKRAIPVNGKVVKIEFSAHADY 368
Query: 388 QKVQPLL-KILQPK--LVLFPEEWR 409
+ + KI QP +V+ E ++
Sbjct: 369 NSLLRFMKKIPQPSKAIVMHGERYQ 393
>gi|67624341|ref|XP_668453.1| ENSANGP00000013258 [Cryptosporidium hominis TU502]
gi|54659666|gb|EAL38233.1| ENSANGP00000013258 [Cryptosporidium hominis]
Length = 750
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 57/141 (40%), Gaps = 17/141 (12%)
Query: 216 CSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNT 275
C +K GG VLIP+ +G +L + I+ ++ PI+ S+ E+ +Y
Sbjct: 241 CEMVYSCLKRGGKVLIPVFAIGRAQELCILLEIYWRRMQIRFPIFFGGSMTEKANSYYQL 300
Query: 276 IPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLR 335
W + +F+ HV P K ++ P ++F+ L
Sbjct: 301 FTNWTNTPLADNIFTFP--------------HVLPY---DKSILTLSGPAVLFATPGMLH 343
Query: 336 LGPTIHLLRRWSGDHNSLLVL 356
G ++ + W+ D N+L ++
Sbjct: 344 TGLSLQAFKMWAPDSNNLTII 364
>gi|326495752|dbj|BAJ85972.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 726
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 117/311 (37%), Gaps = 71/311 (22%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
M + LP+ + G SA +Y TE R+G L M Y F +W
Sbjct: 54 MHLGALPYAIKHLGLSAPVYATEPVYRLGLLTM---------YDYFLS----------RW 94
Query: 61 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS 120
+ + +L ++ +A +K S+ L+ E ++I
Sbjct: 95 QVADFDLFSL---------DDIDAAFQNVARLK--YSQNHLLKDKGEG-----IVIAPHV 138
Query: 121 SGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRA---IQGSDLILYSDLSSLDST 177
SG +G W I+ ++ Y A+DF++R + G+ L
Sbjct: 139 SGHLLGGTVWKITKDGEDVVY----------AVDFNHRKERHLNGTTL------------ 176
Query: 178 EDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVG 237
SF + N+L+N + + + FI S + + GGSVL+P++ G
Sbjct: 177 -----GSFVRPAVLITDAYNALNN--QVYKRQQDQDFIDSM-VKVLSGGGSVLLPVDTAG 228
Query: 238 VFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLC---KQRQEKLFSGDPL 294
L+LL + + L PIY +++V+ + + + EW+ + E L
Sbjct: 229 RVLELLLTMEQYWAQRHLVYPIYFLTNVSTSTVDFVKSFLEWMSDSISKSFEHTRDNAFL 288
Query: 295 FAHVKLIKEKK 305
HV LI K+
Sbjct: 289 LRHVSLIINKE 299
>gi|429327273|gb|AFZ79033.1| hypothetical protein BEWA_018780 [Babesia equi]
Length = 878
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 111/289 (38%), Gaps = 48/289 (16%)
Query: 97 SKVQTLRFGEEACY-------NGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFAS 149
++ LR+ E CY N + + ++G IG W+I +I
Sbjct: 140 TQCSKLRYKETHCYSKSFNNTNVKISCRPINNGCSIGGALWVIDVGFSSI---------- 189
Query: 150 GHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSD----DNNNWEELMNSLSNYD-- 203
I G D +YS S L + D+D + D ++ + + +NY
Sbjct: 190 ----------ICGDDFRMYS--SVLLNPIDLDHIARPDVLIINHESSKVREEEKTNYKGR 237
Query: 204 ESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYII 262
E + + L + + + ++ GGSVLIP N + LL + + L I ++
Sbjct: 238 EKIYQFHDLDLLINKMVGTLNDGGSVLIPSNIDHTLINLLVTLNFVWATADLSHYKIVLV 297
Query: 263 SSVAEELLAYTNTIPEWLCKQRQEKLFSG--DPLFAHVKLIKEKKIHVFPAVHSPKLLMN 320
S VA+++L T E++ +PL + H+ P S LL
Sbjct: 298 SPVADKILLLVGTCLEYMKSNLYHNFIKTLWNPL--------QNINHITPLT-SLNLLSK 348
Query: 321 WQ-EPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAELAVLP 368
+Q P I S S+ G T L + H +L++L +D L +P
Sbjct: 349 YQYAPTIFISTCNSIHFGFTSFLFVSLASYHKNLIILSKPIDGILKYVP 397
>gi|147905468|ref|NP_001088278.1| cleavage and polyadenylation specific factor 3, 73kDa [Xenopus
laevis]
gi|54038587|gb|AAH84286.1| LOC495111 protein [Xenopus laevis]
Length = 692
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 150/393 (38%), Gaps = 71/393 (18%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 212 STYGTHIHEKREEREARFCNTVHDIVNRGGRSLIPVFALGRAQELLLILDEYWQNHPELH 271
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 272 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 318
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 319 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 378
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + + +
Sbjct: 379 EEIVTMSGQKLPLKMSVDYISFSAHTDYQQTSEFVRALKPPHVILVHGEQNEM--ARLKA 436
Query: 420 FSVSHYSENE----TIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLF-VN 474
+ Y +NE +H P E+ L + +K + +K R+ G L N
Sbjct: 437 ALIREYEDNEEVDIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQAQRISGILVKRN 496
Query: 475 HGKHQLLPENEPGGSS---------QTRPFLHWGSPDPENLL-AELSKMGINGSVERCMT 524
H L P + + Q PF P NLL +L ++ G VE
Sbjct: 497 FNYHILCPSDLSSYTDLAMSTVTQKQAIPF-----TGPFNLLFCQLQQL--TGDVE---- 545
Query: 525 DAESEDGFTVKVQDPEKSMIEVRAAVTVISAAD 557
+++ EK + V AVTV+ AD
Sbjct: 546 ----------EIEVNEKDALRVFKAVTVVKDAD 568
>gi|327408312|emb|CCA30123.1| unnamed protein product [Neospora caninum Liverpool]
Length = 1183
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 56/142 (39%), Gaps = 7/142 (4%)
Query: 215 ICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTN 274
C+ D++ GG VLIP+ VG +L + + E L PIY + E Y
Sbjct: 495 FCAVVHDTLTKGGKVLIPVFAVGRAQELCMLLENYWERMHLHFPIYFAGGMTERANVYYR 554
Query: 275 TIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSL 334
W +GD L H+ P S L++ P ++ + L
Sbjct: 555 LYVHWSKANGSVDAGAGDELPTSAFSFP----HILPFQSS---LLSAPTPLVLLATPGML 607
Query: 335 RLGPTIHLLRRWSGDHNSLLVL 356
G + L+ W+GD +L++L
Sbjct: 608 HGGLALKALKAWAGDQANLVLL 629
>gi|260942135|ref|XP_002615366.1| hypothetical protein CLUG_04248 [Clavispora lusitaniae ATCC 42720]
gi|238850656|gb|EEQ40120.1| hypothetical protein CLUG_04248 [Clavispora lusitaniae ATCC 42720]
Length = 940
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 111/255 (43%), Gaps = 31/255 (12%)
Query: 89 IAHVKDCISKVQTLRFGEE--ACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSN 146
++ V + K+ ++++ + A N IL+ A++SG +G W+I+ I Y N
Sbjct: 119 VSDVDEWFDKMTSVKYFQNMTALENRILLT-AYNSGHTLGGSFWLITKRLEKIIYAPTWN 177
Query: 147 FASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESV 206
H+ D + S +SSL I S+ EL +++S+
Sbjct: 178 ----HSKDSFLNSASFLSPTTGSPISSLVRPSAIITST---------ELGSNMSHK---- 220
Query: 207 EEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFM-ECSSLKIPIYIISSV 265
+ MEK + + + GG+VL+P G FL+LL I + IP+Y +S
Sbjct: 221 KRMEKFLQLVDATLAN---GGAVLLPTTISGRFLELLRIIDEHLANLQGAAIPVYFLSYS 277
Query: 266 AEELLAYTNTIPEWLCKQ---RQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQ 322
++L+Y + +W+ Q E + + D ++ V + K+ + + +P+ L+
Sbjct: 278 GTKVLSYAANLLDWMSSQLIKEYEGIAAEDRAYSRVPF-EPSKVDL---LSNPQELIQLP 333
Query: 323 EPCIVFSPHWSLRLG 337
P IVF+ + G
Sbjct: 334 GPKIVFASGIDFKDG 348
>gi|326916480|ref|XP_003204535.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-like [Meleagris gallopavo]
Length = 759
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 121/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 279 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 338
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 339 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 385
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 386 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 445
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + + +
Sbjct: 446 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEM--ARLKA 503
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 504 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADKKPEQGQRISGILVKRN 563
Query: 476 GKHQLL 481
+ +L
Sbjct: 564 FNYHIL 569
>gi|15920543|ref|NP_376212.1| cleavage and polyadenylation specificity factor large subunit
[Sulfolobus tokodaii str. 7]
gi|342306155|dbj|BAK54244.1| putative ribonuclease J [Sulfolobus tokodaii str. 7]
Length = 637
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 99/233 (42%), Gaps = 25/233 (10%)
Query: 138 NIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMN 197
N +I GS A H D G+ I+Y+ T+ +D+++ D+ + ++
Sbjct: 325 NAGHILGSAMAHLHIGD-------GTHNIVYTGDFKYARTKLLDKAN--DEFPRVDTIIM 375
Query: 198 SLSNYDESVEEMEKL-AFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL- 255
+ D E E+ A + ++ GG VLIP+ VG +++ + M+ +
Sbjct: 376 ETTYGDHEQENREEAEAKLIEIINRTISRGGRVLIPVLAVGRGQEIMLVLNDAMKKKLIP 435
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGD--PLFAHVKLIKEKKIHVFPAVH 313
++PIY+ + + EE+ A N PE L ++ +E + D P + F +
Sbjct: 436 EVPIYV-TGLVEEITAIHNAYPEMLSREVREAILYKDENPFMS----------EFFHRIE 484
Query: 314 SPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 365
+ + EP I+ + L GP + + + D NS++ + + + L
Sbjct: 485 GYREDIAQGEPSIILATSGMLNGGPAVEFFKTMAPDSRNSIIFVSYQAEGTLG 537
>gi|150401471|ref|YP_001325237.1| beta-lactamase domain-containing protein [Methanococcus aeolicus
Nankai-3]
gi|150014174|gb|ABR56625.1| beta-lactamase domain protein [Methanococcus aeolicus Nankai-3]
Length = 426
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 86/197 (43%), Gaps = 27/197 (13%)
Query: 222 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEWL 280
+++ GG V+IP+ VG +++ + +M LK +PIY+ S+ Y + EWL
Sbjct: 206 TIEKGGKVIIPVFAVGRSQEIIAVLHNYMRSKLLKRVPIYVEGSLVHTTGIYMSH-SEWL 264
Query: 281 CKQRQEKLFSGDPLFAHVKLI-KEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPT 339
+ + L + F V ++ KE ++ +EPCI+ S ++ GP
Sbjct: 265 NPKIRNNLENRINPFGDVTIVNKENSSEIY-----------NKEPCIIISTSGMVQGGPI 313
Query: 340 IHLLRRWSGDHNSLLVLENEVDAELA---------VLPFK---PISMKVLQCSFLSGKKL 387
+ L+ N +++ + + L + PF+ P+ +V++ F +
Sbjct: 314 LQYLKLLKSPKNKIILTGFQAEETLGRQLEDGAEEITPFRNKIPVRGEVVKVEFSAHSDY 373
Query: 388 QK-VQPLLKILQPKLVL 403
++ + KI +PK V
Sbjct: 374 NSLIRYMKKIPKPKKVF 390
>gi|357127861|ref|XP_003565596.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
2-like [Brachypodium distachyon]
Length = 738
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 105/287 (36%), Gaps = 76/287 (26%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
M + LP+ + G SA +Y TE R+G L M Y F +W
Sbjct: 66 MHLGALPYAMKHLGLSAPVYATEPVFRLGLLTM---------YDYFLS----------RW 106
Query: 61 EELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYN----GILII 116
+ + L I V L++ + N GI+I
Sbjct: 107 QVADFDLFTLDDI-------------------DAAFQNVVRLKYSQNHLLNDKGEGIVIA 147
Query: 117 KAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRA---IQGSDLILYSDLSS 173
S L +G W I+ ++ Y A+DF++R + G+ L
Sbjct: 148 PHVSGHL-LGGTVWKITKDGEDVVY----------AVDFNHRKERHLNGTAL-------- 188
Query: 174 LDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPI 233
SF + N+L+N + + + FI S + + +GGSVL+P+
Sbjct: 189 ---------GSFVRPAVLITDAYNALNN--QVYKRQQDQDFIDSM-VKVLASGGSVLLPV 236
Query: 234 NRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 280
+ G L+LL + + L PIY +++V+ + Y + EW+
Sbjct: 237 DTAGRVLELLLIMEQYWAQRHLVYPIYFLTNVSTSTVDYVKSFLEWM 283
>gi|375082947|ref|ZP_09729988.1| Cleavage and polyadenylation specificity factor subunit like
protein [Thermococcus litoralis DSM 5473]
gi|374742377|gb|EHR78774.1| Cleavage and polyadenylation specificity factor subunit like
protein [Thermococcus litoralis DSM 5473]
Length = 651
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 21/172 (12%)
Query: 201 NYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIY 260
+Y EE EK + + ++K G VLIP VG +++ + + L +PIY
Sbjct: 400 DYQMPREEAEKR--LIEVILQTIKRKGKVLIPAMAVGRAQEIMIALEDYARVGGLDVPIY 457
Query: 261 IISSVAEELLAYTNTIPEWLCKQRQEKLFSG------DPLFAHVKLIKEKKIHVFPAVHS 314
+ + E +T PE+L K + ++F + +F V E+K
Sbjct: 458 LDGMIWEATAIHT-AYPEYLSKNLRNQIFHEGYNPFLNEIFKPVANANERKD-------- 508
Query: 315 PKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 365
++ +EP I+ + L GP++ + + D NSL+ + + + L
Sbjct: 509 ---IIESEEPAIIIASSGMLVGGPSVEYFKHLAPDPRNSLIFVSYQAEGTLG 557
>gi|336054997|ref|YP_004563284.1| hypothetical protein WANG_1487 [Lactobacillus kefiranofaciens ZW3]
gi|333958374|gb|AEG41182.1| Hypothetical protein WANG_1487 [Lactobacillus kefiranofaciens ZW3]
Length = 242
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 20/147 (13%)
Query: 328 FSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKL 387
F PH LGPTI W N++DA + +L F + + + GK
Sbjct: 23 FIPHHYTNLGPTIKETMTWQN--------FNKIDANVNLLDFNLQASNHPKVVYHGGK-- 72
Query: 388 QKVQPLLKILQPKLVLFPEEWRTHVSFSDVTSFSVSHYSENETIHIPSLKESAELEIAAD 447
K++PL+K+ KL++ R H FS + S +Y TI++P K+ ++++ D
Sbjct: 73 -KIKPLVKVRDGKLII-----RNHHHFSININSSEDNY---LTIYLPK-KQLTKIKVNTD 122
Query: 448 IASKFQWRMLKQKKLNITRLKGRLFVN 474
+ + KKL + G + N
Sbjct: 123 DGDITSYGKVNAKKLALHSDDGDINAN 149
>gi|384499309|gb|EIE89800.1| hypothetical protein RO3G_14511 [Rhizopus delemar RA 99-880]
Length = 654
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 115/288 (39%), Gaps = 35/288 (12%)
Query: 223 VKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL--KIPIYIISSVAEELLAYTNTIPEWL 280
V GG L+P+ +G +LL + F E IPIY SS+A+ +A T +
Sbjct: 221 VTRGGRCLMPVFALGRAQELLLILDEFWEAHPELDSIPIYYASSLAKRCMAVYQTYINMM 280
Query: 281 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQE--PCIVFSPHWSLRLGP 338
+ +++ +P VF + + K + +++ PC++ + L+ G
Sbjct: 281 NARIRKQFAISNPF-------------VFKHISNLKNVEQFEDSGPCVMMASPGMLQNGL 327
Query: 339 TIHLLRRWSGDHNSLLVL-----ENEVDAELAVLP--FK-------PISMKVLQCSFLSG 384
+ L RW+ D + LV+ EN + + P F+ P+ M V SF +
Sbjct: 328 SRELFERWAPDKKNGLVITGYCVENTLARQAMNEPSDFQAMDGRKVPLKMSVDYISFSAH 387
Query: 385 KKL-QKVQPLLKILQPKLVLFPEEWRTHVSFSDVTSFSVSHYSENETIHIPSLKESAELE 443
Q + + ++ P ++L E S EN TI+ P ++ +L
Sbjct: 388 VDFTQNSKFIDEVKAPHVILVHGEANAMYRLKSALQSKYSEKEENVTIYTPKNCDTVKLH 447
Query: 444 IAADIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQLL-PE--NEPGG 488
+ +K R+ + L G L V + ++ PE NE GG
Sbjct: 448 FRGEKMAKTIGRLAAKYPTENQALNGVLLVKDFQLNIMSPEDLNELGG 495
>gi|374636870|ref|ZP_09708413.1| RNA-metabolising metallo-beta-lactamase [Methanotorris formicicus
Mc-S-70]
gi|373557613|gb|EHP84014.1| RNA-metabolising metallo-beta-lactamase [Methanotorris formicicus
Mc-S-70]
Length = 419
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 85/194 (43%), Gaps = 29/194 (14%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEW 279
++++ GG V+IP+ +G ++L I ++ LK +P+Y+ S+ Y + + +W
Sbjct: 203 ETIENGGKVIIPVFAIGRAQEILLIINNYIRSGKLKDVPVYVDGSLIHATGIYMSYL-DW 261
Query: 280 LCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPT 339
L + +K + E +I+ F + + +EPCI+ S ++ GP
Sbjct: 262 LNPK--------------LKNMVENRINPFGELKKADNGVFNKEPCIIVSTSGMVQGGPV 307
Query: 340 IHLLRRWSGDHNSLLVLENEVDAELA---------VLPFK---PISMKVLQCSFLS-GKK 386
+ L N L++ + + L + PFK P+ KV++ F + G
Sbjct: 308 LQYLSLLKSPKNKLILTGYQAEGTLGRALEEGVEEITPFKNKIPVRGKVVKIEFSAHGDY 367
Query: 387 LQKVQPLLKILQPK 400
V+ + KI PK
Sbjct: 368 NSLVRYIKKIPTPK 381
>gi|213409816|ref|XP_002175678.1| endoribonuclease ysh1 [Schizosaccharomyces japonicus yFS275]
gi|212003725|gb|EEB09385.1| endoribonuclease ysh1 [Schizosaccharomyces japonicus yFS275]
Length = 771
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 89/185 (48%), Gaps = 20/185 (10%)
Query: 209 MEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--LKIPIYIISSVA 266
++K A + + +V+ GG VL+P+ +G +LL + + + +PIY SS+A
Sbjct: 194 LDKEARLLNLVHTTVRNGGRVLMPVFALGRAQELLLILDEYWHSHAELRSVPIYYASSLA 253
Query: 267 EELLAYTNTIPEWLCKQRQEKLFSGDP-LFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPC 325
+ +A T + + ++ +P +F ++K + + I F + P
Sbjct: 254 RKCMAVYQTYINMMNDKIRKAFAERNPFIFRYIKSL--RSIDKFDDIG----------PS 301
Query: 326 IVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSG 384
++ + L+ G + LL RW+ D N+LL+ V+ +A L I+ + ++ + LSG
Sbjct: 302 VILASPGMLQNGVSRTLLERWAPDARNTLLLTGYSVEGTMAKL----IANEPIEITTLSG 357
Query: 385 KKLQK 389
+K+ +
Sbjct: 358 QKIPR 362
>gi|150402550|ref|YP_001329844.1| beta-lactamase domain-containing protein [Methanococcus maripaludis
C7]
gi|150033580|gb|ABR65693.1| beta-lactamase domain protein [Methanococcus maripaludis C7]
Length = 422
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 88/205 (42%), Gaps = 31/205 (15%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEW 279
++++ GG V+IP+ VG +++ I +M+ +LK +PIYI S+ Y +W
Sbjct: 204 ETIENGGKVIIPVFAVGRSQEIIVVINNYMKSGALKEVPIYINGSLTHTTGMYMG-YSDW 262
Query: 280 LCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPT 339
L + + + E +I+ F + +EPCI+ S ++ GP
Sbjct: 263 LNPKIKNAI--------------ENRINPFGNLIKGGDEAFSKEPCIIISTSGMVQGGPV 308
Query: 340 IHLLRRWSGDHNSLLVLENEVDAELA---------VLPFK---PISMKVLQCSFLSGKKL 387
+ L N +++ + + + V PFK P++ KV++ F +
Sbjct: 309 LQYLSLLKNPRNKIILTGYQAEGTIGRSLEEGATEVKPFKRAIPVNGKVVKIEFSAHADY 368
Query: 388 QKVQPLL-KILQPK--LVLFPEEWR 409
+ + KI QP +V+ E ++
Sbjct: 369 NSLLRFMKKIPQPSKAIVMHGERYQ 393
>gi|159905675|ref|YP_001549337.1| beta-lactamase domain-containing protein [Methanococcus maripaludis
C6]
gi|159887168|gb|ABX02105.1| beta-lactamase domain protein [Methanococcus maripaludis C6]
Length = 422
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 75/174 (43%), Gaps = 28/174 (16%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEW 279
++++ GG V+IP+ VG +++ I +M+ +LK +PIYI S+ Y +W
Sbjct: 204 ETIENGGKVIIPVFAVGRSQEIIVVINNYMKSGALKEVPIYINGSLTHTTGMYMG-YSDW 262
Query: 280 LCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPT 339
L + + + E +I+ F + +EPCI+ S ++ GP
Sbjct: 263 LNPKIKNAI--------------ENRINPFGNLIKGGDEAFSKEPCIIISTSGMVQGGPV 308
Query: 340 IHLLRRWSGDHNSLLVLENEVDAELA---------VLPFK---PISMKVLQCSF 381
+ L N +++ + + + V PFK P++ KV++ F
Sbjct: 309 LQYLSLLKNPRNKIILTGYQAEGTIGRSLEEGATEVKPFKRAIPVNGKVVKIEF 362
>gi|301092283|ref|XP_002997000.1| cleavage and polyadenylation specificity factor subunit, putative
[Phytophthora infestans T30-4]
gi|262112189|gb|EEY70241.1| cleavage and polyadenylation specificity factor subunit, putative
[Phytophthora infestans T30-4]
Length = 513
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 76/182 (41%), Gaps = 26/182 (14%)
Query: 220 IDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEW 279
+ +V+ GG+VLIP + G L+L+ + + + L+ PI ++ ++ + EW
Sbjct: 5 LKTVRNGGNVLIPTDSSGRVLELMRVLDQYWIQNKLRDPIALLHDMSYYTPKAAQAMLEW 64
Query: 280 LCKQRQEKLFS---GDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLR 335
C R K F +P F H+ L VH+ + L P +V + SL
Sbjct: 65 -CNDRIAKNFDVGRQNPFQFTHIHL-----------VHTLEELDALPNPKVVLATSPSLE 112
Query: 336 LGPTIHLLRRWSGD-HNSLLVLENEVDAELA--VLPF-------KPISMKVLQCSFLSGK 385
G + RW+ D NS++ + A V+ K IS V Q FL G
Sbjct: 113 CGFAKDIFIRWAPDPRNSIIFSSTTSETSFASRVVKLSKDPSAEKNISCTVTQKVFLEGA 172
Query: 386 KL 387
+L
Sbjct: 173 EL 174
>gi|402471873|gb|EJW05382.1| hypothetical protein EDEG_00046 [Edhazardia aedis USNM 41457]
Length = 507
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 80/415 (19%), Positives = 151/415 (36%), Gaps = 95/415 (22%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ T + G+ IY+T I Q+++E+ R+ A +++ E++E
Sbjct: 73 ALPYFTEVLGYDGPIYMTHPTKAICQILLEDT-------RKI--ARKNNDKMTYNKEDIE 123
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD 124
+C+ KV + E ++ IIK + +G
Sbjct: 124 -----------------------------NCMKKVIPINMNETYEHDVDFIIKPYPAGHV 154
Query: 125 IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSS 184
+GA + + ++ Y N + + DL + TE S+
Sbjct: 155 LGAAMFYVKVGCESLVYTGDYNTTPDRHLGGAWIDCLRPDLFI---------TESTYGST 205
Query: 185 FSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLE 244
D +E E L+ I C VK GG VLIP +G ++
Sbjct: 206 IRDC---------------RKAKEREFLSSIYEC----VKNGGKVLIPTFALGRAQEMCL 246
Query: 245 QIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEK 304
I + E +L +P+Y + +AE N I E + K I E+
Sbjct: 247 LIDSYWEKMNLSVPVYFTAGMAER----ANQIYRLYINYTNETI---------RKKILER 293
Query: 305 KIHVFPAVHS-PKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLL--------- 354
+ + + S K +++ P ++ + L G +++L + D N+++
Sbjct: 294 NLFEYKYIKSLDKGVIDLPGPMVILASPGMLHSGNSLNLFLKICHDKNNMIVIPGYCVRG 353
Query: 355 -----VLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLF 404
VL+ E E+ + +++KV +F + + + L+K QPK V+
Sbjct: 354 TVGDKVLKGEKTIEVGKKIYD-VNIKVKNLAFSAHADAKGIIELIKQCQPKNVML 407
>gi|352683091|ref|YP_004893615.1| mRNA 3'-end processing factor [Thermoproteus tenax Kra 1]
gi|350275890|emb|CCC82537.1| mRNA 3'-end processing factor [Thermoproteus tenax Kra 1]
Length = 635
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 6/140 (4%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEW 279
++++ GG VLIP G ++L + M SL K PIY+ + E L AY P +
Sbjct: 394 ETIERGGKVLIPAFSTGRAQEILYILNREMNKGSLKKAPIYVDGMIVETLNAYL-MYPHF 452
Query: 280 LCKQRQEKLFSGDPLF---AHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRL 336
L ++ E++++G F ++++I+ K K++ + Q P ++ +PH L
Sbjct: 453 LNREVAEEIYNGINPFTSSGNIQIIERAKRLEDRINQVAKIVQDGQ-PGVIIAPHGMLNG 511
Query: 337 GPTIHLLRRWSGDHNSLLVL 356
GP + + D + L+
Sbjct: 512 GPILEYFVHLAPDPANKLIF 531
>gi|209875817|ref|XP_002139351.1| RNA-metabolising metallo-beta-lactamase family protein
[Cryptosporidium muris RN66]
gi|209554957|gb|EEA05002.1| RNA-metabolising metallo-beta-lactamase family protein
[Cryptosporidium muris RN66]
Length = 797
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 71/353 (20%), Positives = 125/353 (35%), Gaps = 66/353 (18%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ T G+S I +T + +++ + C ME + S + E +
Sbjct: 78 ALPYFTEKIGYSGPIIMTYPTKAVSPILLADC-CKVMEQKNILSKFGSD----INTESTD 132
Query: 65 LL-PSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGL 123
+L P + ++G+ V C+ KV ++ + NGI I + +G
Sbjct: 133 ILKPVDPQHFSVGD--------------VWKCMEKVTAIQLHQTISVNGI-NITPYYAGH 177
Query: 124 DIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQS 183
+GA + + +I Y N M D S L+ D+ +ST
Sbjct: 178 VLGASMFHVEVGNESIVYTGDYN------MVRDRHLGPASIKKLFPDVLLSEST------ 225
Query: 184 SFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLL 243
+ Y + F C + ++ GG VLIP+ VG +L
Sbjct: 226 ---------------YATYIRPSRRSTERIF-CEMVLQCLEKGGKVLIPVFAVGRAQELC 269
Query: 244 EQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKE 303
+ F L+ PIY ++ E+ Y W + LFS
Sbjct: 270 ILLEFFWRRMQLRYPIYFGGAMTEKSSLYYQLYTNWTNTALSDDLFSFP----------- 318
Query: 304 KKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
HV P S ++ P ++F+ L G ++ + W+ D N+L ++
Sbjct: 319 ---HVLPYDRS---VLTNTGPAVLFATPGMLHAGLSLQAFKCWAPDPNNLTII 365
>gi|333910182|ref|YP_004483915.1| KH-domain/beta-lactamase-domain-containing protein [Methanotorris
igneus Kol 5]
gi|333750771|gb|AEF95850.1| KH-domain/beta-lactamase-domain protein [Methanotorris igneus Kol
5]
Length = 635
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 14/140 (10%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 280
++++ GG VLIP+ VG +L+ + P+Y+ + E +T PE+L
Sbjct: 402 ETLQRGGKVLIPVFGVGRAQELMLVLEEGYNQGVFNAPVYLDGMIWEATAIHT-AYPEYL 460
Query: 281 CKQRQEKLF-SGDPLFAHVKLIKEKKIHVFPAVHSP---KLLMNWQEPCIVFSPHWSLRL 336
K + ++F GD F VF V S + +++ EPCI+ + L
Sbjct: 461 SKVIRNRIFHEGDNPFLS---------EVFKRVGSTNERRRVIDSDEPCIILATSGMLTG 511
Query: 337 GPTIHLLRRWSGDHNSLLVL 356
GP++ + + D + LV
Sbjct: 512 GPSVEYFKNLAPDEKNTLVF 531
>gi|333897915|ref|YP_004471789.1| beta-lactamase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333113180|gb|AEF18117.1| beta-lactamase domain protein [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 820
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 101/251 (40%), Gaps = 39/251 (15%)
Query: 114 LIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDL-ILYSDLS 172
L + +S+G GA + I G +G S F SG F I+G+ + L D++
Sbjct: 140 LKVTFYSAGHIAGAASTYIVGNEG-------SFFYSGDFSRFRQNTIEGASIPKLRPDVA 192
Query: 173 SLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIP 232
+ST + D + EL E +EK+ ++ +K GG VLIP
Sbjct: 193 FFEST-------YGDKLHANREL--------EESRLVEKIGYV-------IKNGGKVLIP 230
Query: 233 INRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGD 292
+G +++ + + ++ +Y+ V + Y P +L + +K+F G
Sbjct: 231 AFALGRAQEIILILKKAINKGMIETKVYVDGMVKDICRIYKLN-PNYLRESLAKKIFKGG 289
Query: 293 PLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNS 352
+F ++ P S +EPC++ S L GP+ + +GD +
Sbjct: 290 EIFFDD--------NIMPVDKSEMREEIIKEPCVIVSSSGMLTGGPSQWYAEKLAGDEKN 341
Query: 353 LLVLENEVDAE 363
L+ + D E
Sbjct: 342 LIAITGYQDEE 352
>gi|294656507|ref|XP_002770276.1| DEHA2D07304p [Debaryomyces hansenii CBS767]
gi|199431523|emb|CAR65632.1| DEHA2D07304p [Debaryomyces hansenii CBS767]
Length = 959
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 222 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLC 281
++ GG+VL+P + G FL+LL I ++ S IP+Y +S ++L+Y + + EW+
Sbjct: 233 TLANGGAVLLPTSLSGRFLELLHLIDQHLQ--SAPIPVYFLSYSGTKVLSYASNLLEWMS 290
Query: 282 KQ 283
Q
Sbjct: 291 SQ 292
>gi|427779921|gb|JAA55412.1| Putative cleavage and polyadenylation specificity factor cpsf
subunit [Rhipicephalus pulchellus]
Length = 737
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 88/420 (20%), Positives = 163/420 (38%), Gaps = 66/420 (15%)
Query: 90 AHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFAS 149
A ++ + K++T+ F EE NGI +++G +GA ++I A + Y
Sbjct: 182 ADLESSMEKIETINFHEEKDVNGIRFW-CYNAGHVLGAAMFMIEIAGVKVLYTG------ 234
Query: 150 GHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEM 209
DF Q ++ +++ ++ I +S++ ++ E EE
Sbjct: 235 ----DFSR---QEDRHLMAAEIPNIHPDVLIIESTYG-------------THIHEKREER 274
Query: 210 EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--LKIPIYIISSVAE 267
E A D V GG LIP+ +G +LL + + IPIY SS+A+
Sbjct: 275 E--ARFTGLVHDIVNRGGRCLIPVFALGRAQELLLILDEYWSNHPELHDIPIYYASSLAK 332
Query: 268 ELLAYTNTIPEWLCKQRQEKLFSGDP-LFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCI 326
+ +A T + ++ + ++ +P +F H+ + K I F + PC+
Sbjct: 333 KCMAVYQTYVNAMNERIRRQITINNPFVFKHISNL--KSIEHFEDI----------GPCV 380
Query: 327 VFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-------------PI 372
V + ++ G + L W D N +++ V+ LA P+
Sbjct: 381 VMASPGMMQSGLSRELFESWCTDPKNGVIIAGYCVEGTLAKTILSEPEEISTMVGQKLPL 440
Query: 373 SMKVLQCSFLSGKKLQKVQPLLKILQ-PKLVLFPEEWRTHVSFSDVTSFSVSHYSEN-ET 430
M V SF + Q+ ++ L+ P +VL E + + V Y ++ ET
Sbjct: 441 KMSVDYISFSAHTDYQQTSEFIRTLKPPHIVLVHGEQN---EMGRLKAAIVREYEDDLET 497
Query: 431 ---IHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNHGKHQLLPENEPG 487
+H P ++ EL + +K + Q +L G L + + LL + G
Sbjct: 498 RIEVHNPRNTQAVELHFRGEKTAKVMGSLAVQPPEPGRQLSGVLVKRNFSYHLLAPTDLG 557
>gi|402217247|gb|EJT97328.1| Metallo-hydrolase/oxidoreductase [Dacryopinax sp. DJM-731 SS1]
Length = 780
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 128/330 (38%), Gaps = 40/330 (12%)
Query: 139 IAYISGSNFASGHAMDFDYRAIQGSDL-ILYSDLSSLDSTEDIDQSSFSDDNNNWEELMN 197
I +S + + +GH + IQ +DL ILY+ S + + + ++ ++
Sbjct: 150 IPGLSFTPYPAGHVLGASMFLIQLADLRILYTGDYSREESRHLVRAEVPPGAGIDVLIIE 209
Query: 198 SLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S + EK S + GG VL+P+ VG +LL + F E
Sbjct: 210 STFGVQSTEGRREKEERFTSLIHRILMRGGHVLMPVFAVGGAQELLLILDDFFEKHPELH 269
Query: 256 KIPIYIISSVAEELLA-YTNTIPEWLCKQRQEKLFSGDP-LFAHVKLIK-----EKKIHV 308
K PIY S++A + +A Y + RQ + +P +F HV I EKKI
Sbjct: 270 KFPIYYASALARKCMAVYQGYVHVMNNNIRQRFANNQNPFVFRHVSHIPRSSGWEKKIGE 329
Query: 309 FPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLE----------- 357
P PC++ + ++ G + LL W+ D + +VL
Sbjct: 330 GP-------------PCVILASPGMMQSGASRELLEMWAPDRRNGIVLTGYSVEGSMARN 376
Query: 358 --NEVDAELAVLPFKPISMK--VLQCSFLSGKKLQKVQPLLK-ILQPKLVLFPEEWRTHV 412
NE D E+ + PI ++ V SF + + + ++ I P +VL E
Sbjct: 377 IMNEPD-EINAMKGTPIPLRCTVDNISFSAHVDYAQNREFIEAIGAPHVVLVHGEQSQMF 435
Query: 413 SFSDVTSFSVSHYSENETIHIPSLKESAEL 442
+E+ TIH P E+ EL
Sbjct: 436 RLKAALQAGYKERNEHITIHTPKNCETLEL 465
>gi|374636367|ref|ZP_09707940.1| KH-domain/beta-lactamase-domain protein [Methanotorris formicicus
Mc-S-70]
gi|373559249|gb|EHP85554.1| KH-domain/beta-lactamase-domain protein [Methanotorris formicicus
Mc-S-70]
Length = 635
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 14/140 (10%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 280
++++ GG VLIP+ VG +L+ + P+Y+ + E +T PE+L
Sbjct: 402 ETLQRGGKVLIPVFGVGRAQELMLVLEEGYNQGIFNAPVYLDGMIWEATAIHT-AYPEYL 460
Query: 281 CKQRQEKLF-SGDPLFAHVKLIKEKKIHVFPAVHSP---KLLMNWQEPCIVFSPHWSLRL 336
K + ++F GD F VF V S + +++ EPCI+ + L
Sbjct: 461 SKVIRNRIFHEGDNPFLS---------EVFKRVGSTNERRRVIDGDEPCIILATSGMLTG 511
Query: 337 GPTIHLLRRWSGDHNSLLVL 356
GP++ + + D + LV
Sbjct: 512 GPSVEYFKNLAPDEKNTLVF 531
>gi|380741511|tpe|CCE70145.1| TPA: mRNA 3'-end processing factor, putative [Pyrococcus abyssi
GE5]
Length = 648
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 73/162 (45%), Gaps = 13/162 (8%)
Query: 207 EEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVA 266
EE EK + ++K GG VLIP VG +++ + + ++ PIY+ +
Sbjct: 403 EEAEKR--LIEVIHQTLKRGGKVLIPAMAVGRAQEVMMVLEDYARIGAIDAPIYLDGMIW 460
Query: 267 EELLAYTNTIPEWLCKQRQEKLFSG--DPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEP 324
E +T PE+L ++ +E++F +P + + H + +++ EP
Sbjct: 461 EATAIHT-AYPEYLSRRLREQIFKEGYNPFLSEI-------FHPVANSKERQDIIDSNEP 512
Query: 325 CIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 365
I+ + L GP++ ++ + D NS++ + + + L
Sbjct: 513 AIIIASSGMLVGGPSVEYFKQLAPDPRNSIIFVSYQAEGTLG 554
>gi|68077031|ref|XP_680435.1| cleavage and polyadenylation specificity factor protein [Plasmodium
berghei strain ANKA]
gi|56501360|emb|CAH96636.1| cleavage and polyadenylation specificity factor protein, putative
[Plasmodium berghei]
Length = 967
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 81/205 (39%), Gaps = 29/205 (14%)
Query: 215 ICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTN 274
+C+ + V GG VLIP+ +G +L + + E + PIY + E Y
Sbjct: 292 LCNLVNECVHKGGKVLIPVFAIGRAQELSILLEEYWEKMKINCPIYFGCGLTENANKYYK 351
Query: 275 TIPEWLCKQRQEKLFSGDPLFAHVK-LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWS 333
W+ S + + VK L I F + +N P ++F+
Sbjct: 352 IYSSWI---------SNNCVSTEVKNLFDFSNISQFSNNY-----LNENRPMVLFATPGM 397
Query: 334 LRLGPTIHLLRRWSGDHNSLLVL----------ENEVDAELAVL----PFKPISMKVLQC 379
L G + + W+ + N+L++L + E +L + ++ K++
Sbjct: 398 LHTGLALKAFKAWASNPNNLIILPGYCVQGTIGHKLIMGEKKILLDGSTYIYVNCKIIYL 457
Query: 380 SFLSGKKLQKVQPLLKILQPKLVLF 404
SF + +Q L+K + PK V+F
Sbjct: 458 SFSAHADSNGIQQLIKHVMPKNVIF 482
>gi|82704800|ref|XP_726704.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23482224|gb|EAA18269.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 954
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 81/205 (39%), Gaps = 29/205 (14%)
Query: 215 ICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTN 274
+C+ + V GG VLIP+ +G +L + + E + PIY + E Y
Sbjct: 292 LCNLVNECVHKGGKVLIPVFAIGRAQELSILLEEYWEKMKINCPIYFGCGLTENANKYYK 351
Query: 275 TIPEWLCKQRQEKLFSGDPLFAHVK-LIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWS 333
W+ S + + VK L I F + +N P ++F+
Sbjct: 352 IYSSWI---------SNNCVSTEVKNLFDFSNISQFSNNY-----LNENRPMVLFATPGM 397
Query: 334 LRLGPTIHLLRRWSGDHNSLLVL----------ENEVDAELAVL----PFKPISMKVLQC 379
L G + + W+ + N+L++L + E +L + ++ K++
Sbjct: 398 LHTGLALKAFKAWASNPNNLIILPGYCVQGTIGHKLIMGEKKILLDGNTYVYVNCKIIYL 457
Query: 380 SFLSGKKLQKVQPLLKILQPKLVLF 404
SF + +Q L+K + PK V+F
Sbjct: 458 SFSAHADSNGIQQLIKHVMPKNVIF 482
>gi|14520957|ref|NP_126432.1| mRNA 3'-end processing factor, [Pyrococcus abyssi GE5]
gi|5458174|emb|CAB49663.1| Cleavage and polyadenylation specficity factor [Pyrococcus abyssi
GE5]
Length = 651
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 73/162 (45%), Gaps = 13/162 (8%)
Query: 207 EEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVA 266
EE EK + ++K GG VLIP VG +++ + + ++ PIY+ +
Sbjct: 406 EEAEKR--LIEVIHQTLKRGGKVLIPAMAVGRAQEVMMVLEDYARIGAIDAPIYLDGMIW 463
Query: 267 EELLAYTNTIPEWLCKQRQEKLFSG--DPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEP 324
E +T PE+L ++ +E++F +P + + H + +++ EP
Sbjct: 464 EATAIHT-AYPEYLSRRLREQIFKEGYNPFLSEI-------FHPVANSKERQDIIDSNEP 515
Query: 325 CIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 365
I+ + L GP++ ++ + D NS++ + + + L
Sbjct: 516 AIIIASSGMLVGGPSVEYFKQLAPDPRNSIIFVSYQAEGTLG 557
>gi|240975718|ref|XP_002402161.1| cleavage and polyadenylation specificity factor, putative [Ixodes
scapularis]
gi|215491113|gb|EEC00754.1| cleavage and polyadenylation specificity factor, putative [Ixodes
scapularis]
Length = 694
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 90/412 (21%), Positives = 161/412 (39%), Gaps = 67/412 (16%)
Query: 96 ISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDF 155
+ K++T+ F EE NGI +++G +GA ++I A + Y DF
Sbjct: 145 MEKIETINFHEEKEVNGIRFW-CYNAGHVLGAAMFMIEIAGVKVLYTG----------DF 193
Query: 156 DYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFI 215
+ Q ++ +++ ++ I +S++ ++ E EE E A
Sbjct: 194 ---SRQEDRHLMAAEIPNIHPDVLIIESTYG-------------THIHEKREERE--ARF 235
Query: 216 CSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--LKIPIYIISSVAEELLAYT 273
D V GG LIP+ +G +LL + + IPIY SS+A++ +A
Sbjct: 236 TGLVHDIVNRGGRCLIPVFALGRAQELLLILDEYWSNHPELHDIPIYYASSLAKKCMAVY 295
Query: 274 NTIPEWLCKQRQEKLFSGDP-LFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHW 332
T + ++ + ++ +P +F H+ + K I F V PC+V +
Sbjct: 296 QTYVNAMNERIRRQITINNPFVFKHISNL--KSIEHFEDV----------GPCVVMASPG 343
Query: 333 SLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-------------PISMKVLQ 378
++ G + L W D N +++ V+ LA P+ M V
Sbjct: 344 MMQSGLSRELFESWCTDPKNGVIIAGYCVEGTLAKTILSEPEEISTMVGQKLPLKMSVDY 403
Query: 379 CSFLSGKKLQKVQPLLKILQ-PKLVLFPEEWRTHVSFSDVTSFSVSHYSEN-ET---IHI 433
SF + Q+ ++ L+ P +VL E + + V Y ++ ET +H
Sbjct: 404 ISFSAHTDYQQTSEFIRTLKPPHIVLVHGEQN---EMGRLKAAIVREYEDDVETRIEVHN 460
Query: 434 PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLF-VNHGKHQLLPEN 484
P ++ EL + +K + Q +L G L N H LLP +
Sbjct: 461 PRNTQAVELYFRGEKTAKVMGSLAVQAPEPGRQLSGVLVKRNFSYHLLLPAD 512
>gi|363732494|ref|XP_419942.3| PREDICTED: cleavage and polyadenylation specificity factor subunit
3 [Gallus gallus]
Length = 672
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 192 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 251
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 252 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 298
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 299 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 358
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 359 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 416
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 417 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADKKPEQGQRISGILVKRN 476
Query: 476 GKHQLL 481
+ +L
Sbjct: 477 FNYHIL 482
>gi|337284211|ref|YP_004623685.1| mRNA 3'-end processing factor [Pyrococcus yayanosii CH1]
gi|334900145|gb|AEH24413.1| mRNA 3'-end processing factor, putative [Pyrococcus yayanosii CH1]
Length = 648
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 69/149 (46%), Gaps = 15/149 (10%)
Query: 222 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLC 281
++K GG VLIP VG +++ + + + +PIY+ + E +T PE+L
Sbjct: 416 TIKRGGKVLIPAMAVGRAQEVMMVLEEYARIGGIDVPIYLDGMIWEATAIHT-AYPEYLS 474
Query: 282 KQRQEKLF--SGDPLFAHVKLIKEKKIHVFPAVHSPKL--LMNWQEPCIVFSPHWSLRLG 337
K+ +E++F +P V P +S + +++ EP I+ + L G
Sbjct: 475 KRLREQIFHEGYNPFLNEV---------FKPVANSRERQDIIDSNEPAIIIASSGMLVGG 525
Query: 338 PTIHLLRRWSGD-HNSLLVLENEVDAELA 365
P++ ++ + D NS++ + + + L
Sbjct: 526 PSVEYFKQLAPDPKNSMIFVSYQAEGTLG 554
>gi|449498153|ref|XP_002196255.2| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 3 [Taeniopygia guttata]
Length = 746
Score = 42.0 bits (97), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 267 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 326
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 327 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 373
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 374 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 433
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 434 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 491
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 492 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADKKPEQGQRISGILVKRN 551
Query: 476 GKHQLL 481
+ +L
Sbjct: 552 FNYHIL 557
>gi|296109857|ref|YP_003616806.1| KH-domain/beta-lactamase-domain protein [methanocaldococcus
infernus ME]
gi|295434671|gb|ADG13842.1| KH-domain/beta-lactamase-domain protein [Methanocaldococcus
infernus ME]
Length = 631
Score = 42.0 bits (97), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 71/165 (43%), Gaps = 15/165 (9%)
Query: 197 NSLSNYDESV-EEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL 255
++ YD+ + + E + I+ ++ GG +LIP+ VG +L+ +
Sbjct: 373 STYGGYDDVLPDRAEAEKELLRIVIEHIEKGGKILIPVFGVGRAQELMLVLEEGYNQGIF 432
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFS-GDPLFAHVKLIKEKKIHVFPAVHS 314
P+Y+ + E +T PE+L K + K+F GD F VF V +
Sbjct: 433 NAPVYLDGMIWEATAIHT-AYPEYLSKDMRRKIFQEGDNPFLS---------DVFQRVRN 482
Query: 315 P---KLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
+ +++ EPC++ + L GP++ + + D + ++
Sbjct: 483 TNDRRRIIDDSEPCVILATSGMLTGGPSLEYFKNLAPDEKNAIIF 527
>gi|449283675|gb|EMC90280.1| Cleavage and polyadenylation specificity factor subunit 3, partial
[Columba livia]
Length = 667
Score = 42.0 bits (97), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 188 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 247
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ ++ T + + ++++ +P VF + +
Sbjct: 248 DIPIYYASSLAKKCMSVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 294
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P IV + ++ G + L W D N +++ V+ LA
Sbjct: 295 KSMDHFDDIGPSIVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHVMSEP 354
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 355 EEITTMSGQKLPMKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 412
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 413 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADKKPEQGQRISGILVKRN 472
Query: 476 GKHQLL 481
+ +L
Sbjct: 473 FNYHIL 478
>gi|297619493|ref|YP_003707598.1| beta-lactamase domain-containing protein [Methanococcus voltae A3]
gi|297378470|gb|ADI36625.1| beta-lactamase domain protein [Methanococcus voltae A3]
Length = 422
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 89/205 (43%), Gaps = 30/205 (14%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK-IPIYIISSVAEELLAYTNTIPEW 279
++++ G V+IP+ VG +++ I ++ LK +P+Y+ S+ Y + EW
Sbjct: 204 ETIEENGKVIIPVFAVGRAQEIIVIINNYIRSGLLKKVPVYVCGSLTHTTGMYM-SYSEW 262
Query: 280 LCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPT 339
L + + +G F ++ + + + N EPCI+ S ++ GP
Sbjct: 263 LNPKINNLMNNGTNPFGNL-------------LKADDNIFNNNEPCIIISTSGMVQGGPV 309
Query: 340 IHLLRRWSGDHNSLLVLENEVDAELA---------VLPF-KPISM--KVLQCSFLS-GKK 386
+ L N L++ + + + + PF KPI + K+ + F + G
Sbjct: 310 LQYLSLLKNPKNKLILTGYQGEGTIGRSLEEGATEITPFKKPIQIKGKITKIEFSAHGDY 369
Query: 387 LQKVQPLLKILQPK--LVLFPEEWR 409
V+ L KI +PK +V+ E ++
Sbjct: 370 NSLVRYLKKIPEPKKAIVMHGERYQ 394
>gi|402466980|gb|EJW02370.1| hypothetical protein EDEG_03201 [Edhazardia aedis USNM 41457]
Length = 591
Score = 42.0 bits (97), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 220 IDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEW 279
+D +K ++IPI+ V +FL+++ I + KIPI I S + +L N EW
Sbjct: 171 VDILKTDSIIIIPIDFVTLFLEVIFHIFYVLGKKEDKIPITICSPIFNKLSKIVNIQSEW 230
Query: 280 LCKQRQEKLFSG 291
LC +LFSG
Sbjct: 231 LC-----ELFSG 237
>gi|146305000|ref|YP_001192316.1| beta-lactamase domain-containing protein [Metallosphaera sedula DSM
5348]
gi|145703250|gb|ABP96392.1| beta-lactamase domain protein [Metallosphaera sedula DSM 5348]
Length = 642
Score = 42.0 bits (97), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 74/169 (43%), Gaps = 19/169 (11%)
Query: 200 SNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIP 258
+N DES +++ ++ GG VLIP+ VG +++ I M+ + ++P
Sbjct: 385 TNRDESEKQL------IDVINKTLNRGGKVLIPVLAVGRGQEIMLVINDAMKRKLIPEVP 438
Query: 259 IYIISSVAEELLAYTNTIPEWLCKQ-RQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKL 317
+Y+ + + +E+ A PEWL K+ R LF + F F + +
Sbjct: 439 VYV-TGLFDEVTAIHTAYPEWLGKEVRDSILFRDENPFTS---------EFFKRIEGYRE 488
Query: 318 LMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 365
+ EP I+ + L GP + ++ + D NSL+ + + + L
Sbjct: 489 DIAEGEPSIILATSGMLNGGPAVEFFKQLAPDPKNSLIFVSYQAEGTLG 537
>gi|296109715|ref|YP_003616664.1| RNA-metabolising metallo-beta-lactamase [methanocaldococcus
infernus ME]
gi|295434529|gb|ADG13700.1| RNA-metabolising metallo-beta-lactamase [Methanocaldococcus
infernus ME]
Length = 419
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 92/208 (44%), Gaps = 34/208 (16%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEE---LLAYTNTIP 277
++++ GG V+IP+ VG ++L + ++ L+ I+ S+ L+YT
Sbjct: 202 ETIERGGKVIIPVFAVGRAQEILLVLNNYIRSGELEAKIFTDGSLIHATSIYLSYT---- 257
Query: 278 EWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLG 337
+WL + + + +G F +V+ E +I EPC++ S ++ G
Sbjct: 258 DWLNPKLKNLIETGINPFGNVEKADESRI------------FKKDEPCVIVSTSGMVQGG 305
Query: 338 PTIHLLRRWSGDHNSLLVLENEVDAELA---------VLPFK---PISMKVLQCSFLS-G 384
P + LR N L++ + + L + PFK PI +V++ F + G
Sbjct: 306 PVLKYLRLLKDPKNKLILTGYQAEGTLGRALEEGIKEIKPFKNKIPIRGEVVKIEFSAHG 365
Query: 385 KKLQKVQPLLKILQPK--LVLFPEEWRT 410
V+ + KI +P+ +V+ E +++
Sbjct: 366 DYNSLVRYIKKIPKPEKAIVMHGERYQS 393
>gi|429243009|ref|NP_594263.2| mRNA cleavage and polyadenylation specificity factor complex
endoribonuclease subunit Ysh1 [Schizosaccharomyces pombe
972h-]
gi|384872669|sp|O13794.2|YSH1_SCHPO RecName: Full=Endoribonuclease ysh1; AltName: Full=mRNA
3'-end-processing protein ysh1
gi|347834169|emb|CAB16227.2| mRNA cleavage and polyadenylation specificity factor complex
endoribonuclease subunit Ysh1 [Schizosaccharomyces
pombe]
Length = 757
Score = 42.0 bits (97), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 87/188 (46%), Gaps = 26/188 (13%)
Query: 209 MEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLL----EQIAIFMECSSLKIPIYIISS 264
+EK A + + +++ GG VL+P+ +G +LL E ++ S +PIY SS
Sbjct: 223 LEKEARLLNIIHSTIRNGGRVLMPVFALGRAQELLLILDEYWNNHLDLRS--VPIYYASS 280
Query: 265 VAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQE- 323
+A + +A T + + K+ E+ +F V S + L + +
Sbjct: 281 LARKCMAIFQTYVNMMNDNIR-------------KIFAERNPFIFRFVKSLRNLEKFDDI 327
Query: 324 -PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFKPISMKVLQCSF 381
P ++ + L+ G + LL RW+ D N+LL+ V+ +A K I+ + ++
Sbjct: 328 GPSVILASPGMLQNGVSRTLLERWAPDPRNTLLLTGYSVEGTMA----KQITNEPIEIVS 383
Query: 382 LSGKKLQK 389
LSG+K+ +
Sbjct: 384 LSGQKIPR 391
>gi|226492345|ref|NP_001151557.1| LOC100285191 [Zea mays]
gi|195647682|gb|ACG43309.1| cleavage and polyadenylation specificity factor, 100 kDa subunit
[Zea mays]
Length = 673
Score = 42.0 bits (97), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 109/291 (37%), Gaps = 78/291 (26%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
M + LP+ + G SA +Y TE R+G L M Y F +W
Sbjct: 2 MHLGALPYAMKHLGLSAPVYATEPVFRLGLLTM---------YDHFLS----------RW 42
Query: 61 E--ELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGI---LI 115
+ + +L + V V L++ + N ++
Sbjct: 43 QVSDFDLF---------------------TLDDVDAAFQNVVRLKYSQNYLLNDKGEGVV 81
Query: 116 IKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRA---IQGSDLILYSDLS 172
I +G +G W I+ ++ Y A+DF++R + G+ L
Sbjct: 82 IAPHVAGHLLGGTVWKITKDGEDVVY----------AVDFNHRKERHLNGTVL------- 124
Query: 173 SLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIP 232
SF + N+L+N + + + FI S I + GGSVL+P
Sbjct: 125 ----------GSFVRPAVLITDAYNALNN--QGYRKKQDQDFIDSL-IKVLATGGSVLLP 171
Query: 233 INRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQ 283
++ G L+LL + ++ + L+ PIY +++V+ + Y + EW+ Q
Sbjct: 172 VDTAGRVLELLLLLDMYWDERRLQYPIYFLTNVSTSTVDYVKSFLEWMGDQ 222
>gi|327261273|ref|XP_003215455.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-like [Anolis carolinensis]
Length = 651
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 121/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 171 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 230
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
+IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 231 EIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 277
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 278 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 337
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 338 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 395
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 396 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADKKPEQGQRVSGILVKRN 455
Query: 476 GKHQLL 481
+ +L
Sbjct: 456 FNYHIL 461
>gi|389583415|dbj|GAB66150.1| RNA-metabolising metallo-beta-lactamase domain containing protein
[Plasmodium cynomolgi strain B]
Length = 713
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 80/380 (21%), Positives = 141/380 (37%), Gaps = 82/380 (21%)
Query: 91 HVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASG 150
H+ CI KV L+ E G + I + +G +GAC + I ++ Y
Sbjct: 202 HIYSCIGKVVGLQI-NETFEMGNMSITPYYAGHVLGACIFKIEVNNFSVIYTG------- 253
Query: 151 HAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEME 210
DY + L + + SL I +S+++ Y +
Sbjct: 254 -----DYNTVPDKHL-GSTKIPSLTPEIFISESTYA--------------TYVRPTRKAS 293
Query: 211 KLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELL 270
+L +C+ + V GG VLIP+ +G +L + + + PIY + E
Sbjct: 294 ELD-LCNLVHECVHKGGKVLIPVFAIGRAQELSILLDSYWRKMKINYPIYFGCGLTENAN 352
Query: 271 AYTNTIPEWL---CKQRQEK-LFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCI 326
Y W+ C +K LF FA++ P V++ + P +
Sbjct: 353 KYYRIYSSWVNSSCVSTDKKNLFD----FANIS----------PFVNN---YLGENRPMV 395
Query: 327 VFSPHWSLRLGPTIHLLRRWSGDHNSLLVL-----ENEVDAELAV---------LPFKPI 372
+F+ L G ++ + W+G +L+VL + V +L + + I
Sbjct: 396 LFATPGMLHTGLSLKAFKAWAGSSKNLIVLPGYCVQGTVGHKLIMGERKISFDGNSYMNI 455
Query: 373 SMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFP-------EEWRTHVSFSDVTSFSVSHY 425
+ K++ SF + +Q L++ + P+ VLF E+ H+S SHY
Sbjct: 456 ACKIIYLSFSAHADSNGIQQLIRHVLPQNVLFVHGEKNGMEKLSKHIS---------SHY 506
Query: 426 SENETIHIPSLKESAELEIA 445
N PSL + E +
Sbjct: 507 LINSL--CPSLGQHCEFNFS 524
>gi|156936804|ref|YP_001434600.1| beta-lactamase domain-containing protein [Ignicoccus hospitalis
KIN4/I]
gi|156565788|gb|ABU81193.1| beta-lactamase domain protein [Ignicoccus hospitalis KIN4/I]
Length = 652
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 222 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK------IPIYIISSVAEELLAYTNT 275
+++ GG VLIP+ VG ++L + ++ +K +PIY+ + E A
Sbjct: 402 TIEKGGFVLIPVLAVGRAQEILLLLVDAVQNKLIKSPEGGAVPIYL-DGMVYEATAIHAA 460
Query: 276 IPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLR 335
PEWL K +E++ G+ F + K + + + + ++L + EP ++ + L
Sbjct: 461 YPEWLAKSVKERIIKGENPFLADFVHKVESVSIEGGISREEVLES--EPGVILATSGMLT 518
Query: 336 LGPTIHLLRRWSGDHNSLLVL 356
GP++ R+ + D + +V
Sbjct: 519 GGPSLEYFRKLAPDPKNSIVF 539
>gi|389852761|ref|YP_006354995.1| mRNA 3'-end processing factor [Pyrococcus sp. ST04]
gi|388250067|gb|AFK22920.1| putative mRNA 3'-end processing factor [Pyrococcus sp. ST04]
Length = 651
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 68/147 (46%), Gaps = 11/147 (7%)
Query: 222 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLC 281
++K GG VLIP VG +++ + + + PIY+ + E +T PE+L
Sbjct: 419 TIKRGGKVLIPAMAVGRAQEVMMVLEEYARIGGIDAPIYLDGMIWEATAIHT-AYPEYLS 477
Query: 282 KQRQEKLFSG--DPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPT 339
++ +E++F +P + + H + +++ +EP I+ + L GP+
Sbjct: 478 RRLREQIFKEGYNPFLSEI-------FHPVANSRERQDIIDSKEPAIIIASSGMLVGGPS 530
Query: 340 IHLLRRWSGD-HNSLLVLENEVDAELA 365
+ ++ + D N+++ + + + L
Sbjct: 531 VEYFKQLAPDPKNAIIFVSYQAEGTLG 557
>gi|330796066|ref|XP_003286090.1| hypothetical protein DICPUDRAFT_30371 [Dictyostelium purpureum]
gi|325083909|gb|EGC37349.1| hypothetical protein DICPUDRAFT_30371 [Dictyostelium purpureum]
Length = 468
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 133/359 (37%), Gaps = 90/359 (25%)
Query: 5 GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 64
LP+ T M G+ IY+T I +++E+
Sbjct: 75 ALPYFTEMVGYDGPIYMTLPTKAITPILLEDY---------------------------- 106
Query: 65 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKV------QTLRFGEEACYNGILIIKA 118
RKI + G + P + +KDC+ KV QT++ EE L IKA
Sbjct: 107 ------RKITVDRKG-DTNFFTPQM--IKDCMKKVIPIDLHQTIKVDEE------LSIKA 151
Query: 119 FSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTE 178
+ +G +GA + ++ Y N + + D+++ TE
Sbjct: 152 YYAGHVLGAAMFYAKVGDESVVYTGDYNMTPDRHLGSAWIDQVKPDVLI---------TE 202
Query: 179 DIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGV 238
++ D E + L E VE+ GG VLIP+ +G
Sbjct: 203 TTYATTIRDSKRGRER--DFLKRVHECVEK-----------------GGKVLIPVFALGR 243
Query: 239 FLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAH 297
+L I + E +L +PIY + +AE+ Y W Q+ ++ F +F
Sbjct: 244 VQELCILIDSYWEQMNLSHVPIYFSAGLAEKANLYYKLFINW-TNQKIKQTFVKRNMF-D 301
Query: 298 VKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
K IK + H+ V +P + ++F+ L G ++ + ++W+ + ++ ++
Sbjct: 302 FKHIKPFQSHL---VDAPGAM-------VLFATPGMLHAGASLEVFKKWAPNELNMTII 350
>gi|300676780|gb|ADK26656.1| cleavage and polyadenylation specific factor 3, 73kDa [Zonotrichia
albicollis]
Length = 721
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 121/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 242 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 301
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 302 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 348
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 349 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 408
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + + +
Sbjct: 409 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEM--ARLKA 466
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 467 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADKKPEQGQRISGILVKRN 526
Query: 476 GKHQLL 481
+ +L
Sbjct: 527 FNYHIL 532
>gi|268323698|emb|CBH37286.1| conserved hypothetical protein, RNA-metabolising
metallo-beta-lactamase family [uncultured archaeon]
Length = 628
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 63/136 (46%), Gaps = 13/136 (9%)
Query: 222 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLC 281
++K GG V+IP VG +++ I +E L++P+Y+ + E A + PE+L
Sbjct: 402 TLKQGGKVIIPAFAVG----RSQEVMIALEGMQLEVPVYL-DGMIWEATAIHSAYPEYLN 456
Query: 282 KQRQEKLFSG-DPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTI 340
K + ++ G +P + + + V A + ++ E I+ S L GP +
Sbjct: 457 KNLKNSIYQGANPFLSDIF------VQVDDA-EKRREIIEGDESSIILSTSGMLNGGPVL 509
Query: 341 HLLRRWSGDHNSLLVL 356
L+ +GD + L+
Sbjct: 510 EYLKGLAGDERNTLIF 525
>gi|448122146|ref|XP_004204382.1| Piso0_000226 [Millerozyma farinosa CBS 7064]
gi|358349921|emb|CCE73200.1| Piso0_000226 [Millerozyma farinosa CBS 7064]
Length = 948
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 222 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLC 281
++ GG+VL+P + G FL+LL + ++ S IP+Y +S +L Y + + EW+
Sbjct: 233 TLANGGTVLLPTSLAGRFLELLHLVDQHLQ--SAPIPVYFLSYSGTRVLNYASNLLEWMS 290
Query: 282 KQ 283
Q
Sbjct: 291 GQ 292
>gi|305662491|ref|YP_003858779.1| KH-domain/beta-lactamase-domain-containing protein [Ignisphaera
aggregans DSM 17230]
gi|304377060|gb|ADM26899.1| KH-domain/beta-lactamase-domain protein [Ignisphaera aggregans DSM
17230]
Length = 641
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 11/148 (7%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEW 279
++ GG VLIP VG +++ +A M+ + L KIP+Y I + E+ A P+
Sbjct: 401 ETYDRGGKVLIPSLSVGRAQEVMLILADAMKQNKLPKIPVY-IEGMIHEVTAIHTAYPDL 459
Query: 280 LCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKL-LMNWQEPCIVFSPHWSLRLGP 338
L K+ ++L SG+ F + I+ + P+ ++ EP I+ + L GP
Sbjct: 460 LSKELGQRLKSGENPFDYETFIRLEG-------REPRTEIVESSEPAIIIATSGMLTGGP 512
Query: 339 TIHLLRRWSGDHN-SLLVLENEVDAELA 365
+ + + + N SL+ + +V+ L
Sbjct: 513 AVEYFKLMASNPNHSLVFVSYQVEGTLG 540
>gi|297737628|emb|CBI26829.3| unnamed protein product [Vitis vinifera]
Length = 686
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 105/272 (38%), Gaps = 50/272 (18%)
Query: 194 ELMNSLSNYDESVE------EMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIA 247
+L+ + S Y +V E E L + C D GG VLIP +G +L +
Sbjct: 252 DLLITESTYATTVRDSKYAREREFLKAVHKCVAD----GGKVLIPTFALGRAQELCILLD 307
Query: 248 IFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIH 307
+ E +LK+PIY + + + Y + W QR ++ ++ F K +
Sbjct: 308 NYWERMNLKVPIYFSAGLTIQANMYYKMLISWT-NQRVKETYATHNAFDF------KNVR 360
Query: 308 VFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLEN--------- 358
F + L+N PC++F+ + G ++ + + W+ +L+ L
Sbjct: 361 SF-----DRSLINAPGPCVLFATPGMISGGFSLEVFKLWAPSEMNLVTLPGYCLAGTIGH 415
Query: 359 ----------EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLF---- 404
++D ++ + + ++ Q SF + + L+K L PK V+
Sbjct: 416 KLTTGKPTKIDLDKDIQI----SVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGE 471
Query: 405 -PEEWRTHVSFSDVTSFSVSHYSENETIHIPS 435
P+ + + N+T+ IPS
Sbjct: 472 KPKMASLKGKIESDLGIQCYYPANNDTVCIPS 503
>gi|417412420|gb|JAA52597.1| Putative cleavage and polyadenylation specificity factor cpsf
subunit, partial [Desmodus rotundus]
Length = 714
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 235 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 294
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 295 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 341
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 342 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 401
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 402 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 459
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 460 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGLLADKKPEQGQRVSGILVKRN 519
Query: 476 GKHQLL 481
+ +L
Sbjct: 520 FNYHIL 525
>gi|448124505|ref|XP_004204939.1| Piso0_000226 [Millerozyma farinosa CBS 7064]
gi|358249572|emb|CCE72638.1| Piso0_000226 [Millerozyma farinosa CBS 7064]
Length = 948
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 222 SVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLC 281
++ GG+VL+P + G FL+LL + ++ S IP+Y +S +L Y + + EW+
Sbjct: 233 TLANGGTVLLPTSLAGRFLELLHLVDQHLQ--SAPIPVYFLSYSGTRVLNYASNLLEWMS 290
Query: 282 KQ 283
Q
Sbjct: 291 GQ 292
>gi|414881945|tpg|DAA59076.1| TPA: hypothetical protein ZEAMMB73_548570 [Zea mays]
Length = 309
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 110/292 (37%), Gaps = 80/292 (27%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
M + LP+ + G SA +Y TE R+G L M Y F +W
Sbjct: 66 MHLGALPYAMKHLGLSAPVYATEPVFRLGLLTM---------YDHFLS----------RW 106
Query: 61 E--ELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYN----GIL 114
+ + +L + V V L++ + N G++
Sbjct: 107 QVSDFDLF---------------------TLDDVDAAFQNVVRLKYSQNYLLNDKGEGVV 145
Query: 115 IIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRA---IQGSDLILYSDL 171
I + L +G W I+ ++ Y A+DF++R + G+ L
Sbjct: 146 IAPHVAGHL-LGGTVWKITKDGEDVVY----------AVDFNHRKERHLNGTVL------ 188
Query: 172 SSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLI 231
SF + N+L+N + + + FI S I + GGSVL+
Sbjct: 189 -----------GSFVRPAVLITDAYNALNN--QGYRKKQDQDFIESL-IKVLATGGSVLL 234
Query: 232 PINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQ 283
P++ G L+LL + ++ + L+ PIY +++V+ + Y + EW+ Q
Sbjct: 235 PVDTAGRVLELLLLLDMYWDERRLQYPIYFLTNVSTSTVDYVKSFLEWMGDQ 286
>gi|289579410|ref|YP_003478037.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter
italicus Ab9]
gi|289529123|gb|ADD03475.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter
italicus Ab9]
Length = 829
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 115/276 (41%), Gaps = 41/276 (14%)
Query: 91 HVKDCISKV--QTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFA 148
HVKD + +V T + + + + + +G +GA + I+ A+G+I F
Sbjct: 115 HVKDMLDRVLCYTPGYTFTPFPDSQIKVTLYPAGHILGAASVYITSAEGSI-------FY 167
Query: 149 SGHAMDFDYRAIQGSDL-ILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVE 207
SG F I+G+ + L D++ +ST + D + EL E
Sbjct: 168 SGDFSGFRQNTIEGAFIPKLRPDVAIFEST-------YGDKLHANREL--------EETR 212
Query: 208 EMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAE 267
+EK++ I + GG V+IP +G +++ + + LK +Y+ V E
Sbjct: 213 LIEKVSSI-------INEGGKVIIPAFALGRAQEIILILKKAINKGLLKTKVYVDGMVRE 265
Query: 268 ELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIV 327
Y P +L + +K+F G+ +F +I+ +K + + +E C++
Sbjct: 266 VCRVYKLN-PNYLRQNLAKKIFKGNDIFFDDNVIEVEKPEMREEI--------IKESCVI 316
Query: 328 FSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAE 363
S + GP+ + + + D +L+ + D E
Sbjct: 317 LSSSGMITGGPSQWYVEKLAQDEKNLIAITGYQDEE 352
>gi|297545551|ref|YP_003677853.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
gi|296843326|gb|ADH61842.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
Length = 829
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 115/276 (41%), Gaps = 41/276 (14%)
Query: 91 HVKDCISKV--QTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFA 148
HVKD + +V T + + + + + +G +GA + I+ A+G+I F
Sbjct: 115 HVKDMLDRVLCYTPGYTFTPFPDSQIKVTLYPAGHILGAASVYITSAEGSI-------FY 167
Query: 149 SGHAMDFDYRAIQGSDL-ILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVE 207
SG F I+G+ + L D++ +ST + D + EL E
Sbjct: 168 SGDFSGFRQNTIEGAFIPKLRPDVAIFEST-------YGDKLHANREL--------EETR 212
Query: 208 EMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAE 267
+EK++ I + GG V+IP +G +++ + + LK +Y+ V E
Sbjct: 213 LIEKVSSI-------INEGGKVIIPAFALGRAQEIILILKKAINKGLLKTKVYVDGMVRE 265
Query: 268 ELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIV 327
Y P +L + +K+F G+ +F +I+ +K + + +E C++
Sbjct: 266 VCRVYKLN-PNYLRQNLAKKIFKGNDIFFDDNVIEVEKPEMREEI--------IKESCVI 316
Query: 328 FSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAE 363
S + GP+ + + + D +L+ + D E
Sbjct: 317 LSSSGMITGGPSQWYVEKLAQDEKNLIAITGYQDEE 352
>gi|359472593|ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
Length = 2299
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 105/272 (38%), Gaps = 50/272 (18%)
Query: 194 ELMNSLSNYDESVE------EMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIA 247
+L+ + S Y +V E E L + C D GG VLIP +G +L +
Sbjct: 1446 DLLITESTYATTVRDSKYAREREFLKAVHKCVAD----GGKVLIPTFALGRAQELCILLD 1501
Query: 248 IFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIH 307
+ E +LK+PIY + + + Y + W QR ++ ++ F K +
Sbjct: 1502 NYWERMNLKVPIYFSAGLTIQANMYYKMLISW-TNQRVKETYATHNAFDF------KNVR 1554
Query: 308 VFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLEN--------- 358
F + L+N PC++F+ + G ++ + + W+ +L+ L
Sbjct: 1555 SF-----DRSLINAPGPCVLFATPGMISGGFSLEVFKLWAPSEMNLVTLPGYCLAGTIGH 1609
Query: 359 ----------EVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLF---- 404
++D ++ + + ++ Q SF + + L+K L PK V+
Sbjct: 1610 KLTTGKPTKIDLDKDIQI----SVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGE 1665
Query: 405 -PEEWRTHVSFSDVTSFSVSHYSENETIHIPS 435
P+ + + N+T+ IPS
Sbjct: 1666 KPKMASLKGKIESDLGIQCYYPANNDTVCIPS 1697
>gi|431911821|gb|ELK13965.1| Cleavage and polyadenylation specificity factor subunit 3, partial
[Pteropus alecto]
Length = 667
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 188 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 247
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 248 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 294
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 295 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 354
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 355 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 412
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 413 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 472
Query: 476 GKHQLL 481
+ +L
Sbjct: 473 FNYHIL 478
>gi|355565449|gb|EHH21878.1| hypothetical protein EGK_05038 [Macaca mulatta]
Length = 650
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 202 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 261
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 262 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 308
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 309 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 368
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 369 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 426
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 427 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 486
Query: 476 GKHQLL 481
+ +L
Sbjct: 487 FNYHIL 492
>gi|429963288|gb|ELA42832.1| hypothetical protein VICG_00147 [Vittaforma corneae ATCC 50505]
Length = 513
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 58/304 (19%), Positives = 108/304 (35%), Gaps = 43/304 (14%)
Query: 54 GPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGI 113
GP +M + +LP L +K C+ K+ + E +
Sbjct: 85 GPIYMTYPTKAVLPILLEDCQKILSMKSHDSNIYSFEDIKKCMEKIVPINMNETVEVSKG 144
Query: 114 LIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSS 173
I A+ +G IGA + + ++ Y + + + + DL++
Sbjct: 145 FTITAYYAGHVIGAAMFYVKVGDQSVVYTGDYSTTADQHLGTAWIDTLRPDLMI------ 198
Query: 174 LDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPI 233
TE S D +E E L I +C ++ GG LIPI
Sbjct: 199 ---TESTYGSVIRDC---------------RKAKEREFLQSIHNC----IERGGKTLIPI 236
Query: 234 NRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDP 293
+G ++ + + E L+IP+Y + E+ + + +EK+ +
Sbjct: 237 FALGRAQEICLIVESYWERMGLEIPVYFAGGMTEKANEIYKRFINYTNESVREKILEKNV 296
Query: 294 L-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNS 352
F+H+K P +L Q PC++FS L G ++ + + D +
Sbjct: 297 FEFSHIK----------PYRKGSEL----QGPCVIFSSPGMLHSGTSLRIFKNICSDPRN 342
Query: 353 LLVL 356
L++L
Sbjct: 343 LVIL 346
>gi|15079675|gb|AAH11654.1| Cleavage and polyadenylation specific factor 3, 73kDa [Homo
sapiens]
gi|157929136|gb|ABW03853.1| cleavage and polyadenylation specific factor 3, 73kDa [synthetic
construct]
Length = 684
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 476 GKHQLL 481
+ +L
Sbjct: 490 FNYHIL 495
>gi|219886123|gb|ACL53436.1| unknown [Zea mays]
gi|414881946|tpg|DAA59077.1| TPA: cleavage and polyadenylation specificity factor, subunit
isoform 1 [Zea mays]
gi|414881947|tpg|DAA59078.1| TPA: cleavage and polyadenylation specificity factor, subunit
isoform 2 [Zea mays]
gi|414881948|tpg|DAA59079.1| TPA: cleavage and polyadenylation specificity factor, subunit
isoform 3 [Zea mays]
Length = 737
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 109/291 (37%), Gaps = 78/291 (26%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
M + LP+ + G SA +Y TE R+G L M Y F +W
Sbjct: 66 MHLGALPYAMKHLGLSAPVYATEPVFRLGLLTM---------YDHFLS----------RW 106
Query: 61 E--ELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGI---LI 115
+ + +L + V V L++ + N ++
Sbjct: 107 QVSDFDLF---------------------TLDDVDAAFQNVVRLKYSQNYLLNDKGEGVV 145
Query: 116 IKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRA---IQGSDLILYSDLS 172
I +G +G W I+ ++ Y A+DF++R + G+ L
Sbjct: 146 IAPHVAGHLLGGTVWKITKDGEDVVY----------AVDFNHRKERHLNGTVL------- 188
Query: 173 SLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIP 232
SF + N+L+N + + + FI S I + GGSVL+P
Sbjct: 189 ----------GSFVRPAVLITDAYNALNN--QGYRKKQDQDFIESL-IKVLATGGSVLLP 235
Query: 233 INRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQ 283
++ G L+LL + ++ + L+ PIY +++V+ + Y + EW+ Q
Sbjct: 236 VDTAGRVLELLLLLDMYWDERRLQYPIYFLTNVSTSTVDYVKSFLEWMGDQ 286
>gi|242037469|ref|XP_002466129.1| hypothetical protein SORBIDRAFT_01g001930 [Sorghum bicolor]
gi|241919983|gb|EER93127.1| hypothetical protein SORBIDRAFT_01g001930 [Sorghum bicolor]
Length = 738
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 109/292 (37%), Gaps = 80/292 (27%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
M + LP+ + G SA +Y TE R+G L M Y F +W
Sbjct: 66 MHLGALPYAMKHLGLSAPVYATEPVFRLGLLTM---------YDHFLS----------RW 106
Query: 61 E--ELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYN----GIL 114
+ + +L + V V L++ + N GI+
Sbjct: 107 QVSDFDLF---------------------TLDDVDAAFQNVVRLKYSQNYLLNDKGEGIV 145
Query: 115 IIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRA---IQGSDLILYSDL 171
I + L +G W I+ ++ Y A+DF++R + G+ L
Sbjct: 146 IAPHVAGHL-LGGTVWKITKDGEDVVY----------AVDFNHRKERHLNGTVL------ 188
Query: 172 SSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLI 231
SF + N+L+N + + + FI S I + GGSVL+
Sbjct: 189 -----------GSFVRPAVLITDAYNALNN--QGYRKKQDQDFIDSL-IKVLATGGSVLL 234
Query: 232 PINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQ 283
P++ G L+LL + + + L+ PIY +++V+ + Y + EW+ Q
Sbjct: 235 PVDTAGRVLELLLLLDTYWDERRLQYPIYFLTNVSTSTVDYVKSFLEWMRDQ 286
>gi|126303222|ref|XP_001371997.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-like [Monodelphis domestica]
Length = 684
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 121/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEM--ARLKA 429
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 476 GKHQLL 481
+ +L
Sbjct: 490 FNYHIL 495
>gi|414881949|tpg|DAA59080.1| TPA: hypothetical protein ZEAMMB73_548570 [Zea mays]
Length = 766
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 109/291 (37%), Gaps = 78/291 (26%)
Query: 1 MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKW 60
M + LP+ + G SA +Y TE R+G L M Y F +W
Sbjct: 66 MHLGALPYAMKHLGLSAPVYATEPVFRLGLLTM---------YDHFLS----------RW 106
Query: 61 E--ELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGI---LI 115
+ + +L + V V L++ + N ++
Sbjct: 107 QVSDFDLF---------------------TLDDVDAAFQNVVRLKYSQNYLLNDKGEGVV 145
Query: 116 IKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRA---IQGSDLILYSDLS 172
I +G +G W I+ ++ Y A+DF++R + G+ L
Sbjct: 146 IAPHVAGHLLGGTVWKITKDGEDVVY----------AVDFNHRKERHLNGTVL------- 188
Query: 173 SLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIP 232
SF + N+L+N + + + FI S I + GGSVL+P
Sbjct: 189 ----------GSFVRPAVLITDAYNALNN--QGYRKKQDQDFIESL-IKVLATGGSVLLP 235
Query: 233 INRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQ 283
++ G L+LL + ++ + L+ PIY +++V+ + Y + EW+ Q
Sbjct: 236 VDTAGRVLELLLLLDMYWDERRLQYPIYFLTNVSTSTVDYVKSFLEWMGDQ 286
>gi|348558392|ref|XP_003465002.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-like [Cavia porcellus]
Length = 684
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 123/306 (40%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDA---------- 362
K + ++ + P +V + ++ G + L W D N +++ V+
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 363 -ELAVLPFK--PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
E+A + + P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEIATMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 476 GKHQLL 481
+ +L
Sbjct: 490 FNYHIL 495
>gi|335285899|ref|XP_003354974.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-like [Sus scrofa]
Length = 684
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 476 GKHQLL 481
+ +L
Sbjct: 490 FNYHIL 495
>gi|291412514|ref|XP_002722528.1| PREDICTED: cleavage and polyadenylation specific factor 3, 73kDa
[Oryctolagus cuniculus]
Length = 684
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 476 GKHQLL 481
+ +L
Sbjct: 490 FNYHIL 495
>gi|224121102|ref|XP_002330904.1| predicted protein [Populus trichocarpa]
gi|222872726|gb|EEF09857.1| predicted protein [Populus trichocarpa]
Length = 740
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 9/138 (6%)
Query: 220 IDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEW 279
+ +++ GG+VL+P++ G L+LL + F L PI+ +S V+ + Y + EW
Sbjct: 223 LKTLEGGGNVLLPVDSAGRVLELLLILEQFWGQRFLNYPIFFLSYVSSSTIDYIKSFLEW 282
Query: 280 LCKQRQEKL-FSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGP 338
+ + S D F L+K HV + +L P +V + SL G
Sbjct: 283 MSDSIAKSFETSRDNAF----LMK----HVTLLISKDELDNASTGPKVVLASVASLEAGF 334
Query: 339 TIHLLRRWSGDHNSLLVL 356
+ + W+ D +L++
Sbjct: 335 SHDIFAEWAADVKNLVLF 352
>gi|194220982|ref|XP_001502516.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-like [Equus caballus]
gi|301775721|ref|XP_002923277.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-like [Ailuropoda melanoleuca]
Length = 684
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 476 GKHQLL 481
+ +L
Sbjct: 490 FNYHIL 495
>gi|351704796|gb|EHB07715.1| Cleavage and polyadenylation specificity factor subunit 3
[Heterocephalus glaber]
Length = 692
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 123/306 (40%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVHAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDA---------- 362
K + ++ + P +V + ++ G + L W D N +++ V+
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 363 -ELAVLPFK--PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
E+A + + P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEIATMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 476 GKHQLL 481
+ +L
Sbjct: 490 FNYHIL 495
>gi|212223311|ref|YP_002306547.1| cleavage and polyadenylation specficity factor subunit-like protein
[Thermococcus onnurineus NA1]
gi|212008268|gb|ACJ15650.1| cleavage and polyadenylation specficity factor subunit-like protein
[Thermococcus onnurineus NA1]
Length = 648
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 75/166 (45%), Gaps = 21/166 (12%)
Query: 207 EEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVA 266
EE EK + +++ G VLIP VG +++ + + +++PIY+ +
Sbjct: 403 EEAEKR--LIEVIHQTIRRKGKVLIPAMAVGRAQEIMMVLEEYARVGGIEVPIYLDGMIW 460
Query: 267 EELLAYTNTIPEWLCKQRQEKLFSG------DPLFAHVKLIKEKKIHVFPAVHSPKLLMN 320
E +T PE+L + +E++F +P+F V +E++ +++
Sbjct: 461 EATAIHT-AYPEYLSRHLREQIFHEGYNPFLNPIFKPVANSRERQD-----------IID 508
Query: 321 WQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 365
EP I+ + L GP++ ++ + D NS++ + + + L
Sbjct: 509 SGEPAIIIATSGMLVGGPSVEYFKQLAPDPKNSMIFVSYQAEGTLG 554
>gi|432100623|gb|ELK29151.1| Cleavage and polyadenylation specificity factor subunit 3 [Myotis
davidii]
Length = 684
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADRKPEQGQRVSGILVKRN 489
Query: 476 GKHQLL 481
+ +L
Sbjct: 490 FNYHIL 495
>gi|27805863|ref|NP_776709.1| cleavage and polyadenylation specificity factor subunit 3 [Bos
taurus]
gi|426223116|ref|XP_004005724.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3 [Ovis aries]
gi|18202362|sp|P79101.1|CPSF3_BOVIN RecName: Full=Cleavage and polyadenylation specificity factor
subunit 3; AltName: Full=Cleavage and polyadenylation
specificity factor 73 kDa subunit; Short=CPSF 73 kDa
subunit; AltName: Full=mRNA 3'-end-processing
endonuclease CPSF-73
gi|1707412|emb|CAA65151.1| Cleavage and Polyadenylation Specifity Factor protein [Bos taurus]
gi|75773721|gb|AAI04554.1| Cleavage and polyadenylation specific factor 3, 73kDa [Bos taurus]
gi|296482248|tpg|DAA24363.1| TPA: cleavage and polyadenylation specificity factor subunit 3 [Bos
taurus]
gi|440897562|gb|ELR49218.1| Cleavage and polyadenylation specificity factor subunit 3 [Bos
grunniens mutus]
Length = 684
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 476 GKHQLL 481
+ +L
Sbjct: 490 FNYHIL 495
>gi|359321645|ref|XP_003639652.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-like [Canis lupus familiaris]
Length = 717
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 121/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 238 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 297
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 298 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 344
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 345 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 404
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + + +
Sbjct: 405 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEM--ARLKA 462
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 463 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 522
Query: 476 GKHQLL 481
+ +L
Sbjct: 523 FNYHIL 528
>gi|281351872|gb|EFB27456.1| hypothetical protein PANDA_012399 [Ailuropoda melanoleuca]
Length = 648
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 169 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 228
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 229 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 275
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 276 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 335
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 336 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 393
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 394 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 453
Query: 476 GKHQLL 481
+ +L
Sbjct: 454 FNYHIL 459
>gi|74221128|dbj|BAE42066.1| unnamed protein product [Mus musculus]
Length = 684
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMIQNGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEKN--EMARLKA 429
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 476 GKHQLL 481
+ +L
Sbjct: 490 FNYHIL 495
>gi|242398880|ref|YP_002994304.1| Cleavage and polyadenylation specficity factor subunit like protein
[Thermococcus sibiricus MM 739]
gi|242265273|gb|ACS89955.1| Cleavage and polyadenylation specficity factor subunit like protein
[Thermococcus sibiricus MM 739]
Length = 648
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 73/172 (42%), Gaps = 21/172 (12%)
Query: 201 NYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIY 260
+Y EE EK + + ++K G VLIP VG +++ + + ++PIY
Sbjct: 397 DYQMPREEAEKK--LIETIMHTIKRKGKVLIPAMAVGRSQEIMIALEDYARVGGFEVPIY 454
Query: 261 IISSVAEELLAYTNTIPEWLCKQRQEKLFSG------DPLFAHVKLIKEKKIHVFPAVHS 314
+ + E +T PE+L K + ++F + +F V E+K
Sbjct: 455 LDGMIWEATAIHT-AYPEYLSKNLRNQIFHEGYNPFLNEIFKPVANANERKD-------- 505
Query: 315 PKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 365
++ +EP I+ + L GP++ + + D NSL+ + + + L
Sbjct: 506 ---IIESEEPAIIIASSGMLVGGPSVEYFKHLAPDPRNSLVFVSYQAEGTLG 554
>gi|402890043|ref|XP_003908303.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3 [Papio anubis]
Length = 684
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 476 GKHQLL 481
+ +L
Sbjct: 490 FNYHIL 495
>gi|7706427|ref|NP_057291.1| cleavage and polyadenylation specificity factor subunit 3 [Homo
sapiens]
gi|18203503|sp|Q9UKF6.1|CPSF3_HUMAN RecName: Full=Cleavage and polyadenylation specificity factor
subunit 3; AltName: Full=Cleavage and polyadenylation
specificity factor 73 kDa subunit; Short=CPSF 73 kDa
subunit; AltName: Full=mRNA 3'-end-processing
endonuclease CPSF-73
gi|6002955|gb|AAF00224.1|AF171877_1 cleavage and polyadenylation specificity factor 73 kDa subunit
[Homo sapiens]
gi|18044212|gb|AAH20211.1| Cleavage and polyadenylation specific factor 3, 73kDa [Homo
sapiens]
gi|62822309|gb|AAY14858.1| unknown [Homo sapiens]
gi|119621394|gb|EAX00989.1| cleavage and polyadenylation specific factor 3, 73kDa, isoform
CRA_a [Homo sapiens]
Length = 684
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 476 GKHQLL 481
+ +L
Sbjct: 490 FNYHIL 495
>gi|62898706|dbj|BAD97207.1| cleavage and polyadenylation specific factor 3, 73kDa variant [Homo
sapiens]
Length = 684
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 476 GKHQLL 481
+ +L
Sbjct: 490 FNYHIL 495
>gi|335775092|gb|AEH58456.1| cleavage and polyadenylation specificity facto subunit 3-like
protein, partial [Equus caballus]
Length = 499
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 62/312 (19%), Positives = 124/312 (39%), Gaps = 39/312 (12%)
Query: 194 ELMNSLSNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFME 251
+++ S S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 14 DILISESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQ 73
Query: 252 CSS--LKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVF 309
IPIY SS+A++ +A T + + ++++ +P VF
Sbjct: 74 NHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VF 120
Query: 310 PAVHSPKLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAV 366
+ + K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 121 KHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAK 180
Query: 367 LPFK-------------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVS 413
P+ M V SF + Q+ ++ L+P V+ +
Sbjct: 181 HIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--E 238
Query: 414 FSDVTSFSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKG 469
+ + + + Y +N+ +HI P E+ L + +K + +K R+ G
Sbjct: 239 MARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSG 298
Query: 470 RLFVNHGKHQLL 481
L + + +L
Sbjct: 299 ILVKRNFNYHIL 310
>gi|55741994|ref|NP_001006770.1| cleavage and polyadenylation specificity factor 3 [Xenopus
(Silurana) tropicalis]
gi|49522504|gb|AAH75564.1| cleavage and polyadenylation specific factor 3, 73kDa [Xenopus
(Silurana) tropicalis]
Length = 692
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 124/310 (40%), Gaps = 40/310 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 212 STYGTHIHEKREEREARFCNTVHDIVNRGGRALIPVFALGRAQELLLILDEYWQNHPELH 271
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 272 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 318
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDA---------- 362
K + ++ + P +V + ++ G + L W D N +++ V+
Sbjct: 319 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 378
Query: 363 -ELAVLPFK--PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
E+A + + P+ M V SF + Q+ ++ L+P V+ + + + + +
Sbjct: 379 EEIATMSGQKLPLKMSVDYISFSAHTDYQQTSEFVRALKPPHVILVHGEQNEM--ARLKA 436
Query: 420 FSVSHYSENE----TIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLF-VN 474
+ Y +N+ +H P E+ L + +K + +K R+ G L N
Sbjct: 437 ALIREYEDNDEVEIEVHNPRNTEAVTLNFRGEKLAKVMGLLADKKPEQGQRISGILVKRN 496
Query: 475 HGKHQLLPEN 484
H L P +
Sbjct: 497 FNYHILCPSD 506
>gi|395507218|ref|XP_003757924.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3 [Sarcophilus harrisii]
Length = 684
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 476 GKHQLL 481
+ +L
Sbjct: 490 FNYHIL 495
>gi|119621395|gb|EAX00990.1| cleavage and polyadenylation specific factor 3, 73kDa, isoform
CRA_b [Homo sapiens]
Length = 647
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 168 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 227
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 228 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 274
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 275 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 334
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 335 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 392
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 393 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 452
Query: 476 GKHQLL 481
+ +L
Sbjct: 453 FNYHIL 458
>gi|84489102|ref|YP_447334.1| exonuclease [Methanosphaera stadtmanae DSM 3091]
gi|84372421|gb|ABC56691.1| predicted exonuclease [Methanosphaera stadtmanae DSM 3091]
Length = 635
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 66/147 (44%), Gaps = 15/147 (10%)
Query: 215 ICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYT 273
+ D+++ GG +LIP+ VG +++ + F+ L K+P+Y+ + E +T
Sbjct: 396 LVKAIYDTIQKGGKILIPVFAVGRAQEIMIVLEEFINRGILGKVPVYLDGMIWEATAIHT 455
Query: 274 NTIPEWLCKQRQEKLF-SGDPLFAHVKLIKEKKIHVFPAV---HSPKLLMNWQEPCIVFS 329
PE+L + Q+++F +G+ F VF V + L+ EPC++ S
Sbjct: 456 -AHPEFLSNELQKQIFHAGENPFTS---------DVFNKVTNNEQRRKLLESNEPCVILS 505
Query: 330 PHWSLRLGPTIHLLRRWSGDHNSLLVL 356
L G ++ + D + ++
Sbjct: 506 TSGMLTGGNSVEYFKELCEDEKNRIIF 532
>gi|296224527|ref|XP_002758090.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3 [Callithrix jacchus]
Length = 684
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 476 GKHQLL 481
+ +L
Sbjct: 490 FNYHIL 495
>gi|350539083|ref|NP_001233296.1| cleavage and polyadenylation specificity factor subunit 3 [Pan
troglodytes]
gi|397513374|ref|XP_003826991.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3 [Pan paniscus]
gi|426334660|ref|XP_004028859.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3 [Gorilla gorilla gorilla]
gi|343961085|dbj|BAK62132.1| cleavage and polyadenylation specificity factor 73 kDa subunit [Pan
troglodytes]
gi|343961781|dbj|BAK62478.1| cleavage and polyadenylation specificity factor 73 kDa subunit [Pan
troglodytes]
gi|410254182|gb|JAA15058.1| cleavage and polyadenylation specific factor 3, 73kDa [Pan
troglodytes]
gi|410291448|gb|JAA24324.1| cleavage and polyadenylation specific factor 3, 73kDa [Pan
troglodytes]
gi|410339611|gb|JAA38752.1| cleavage and polyadenylation specific factor 3, 73kDa [Pan
troglodytes]
Length = 684
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 476 GKHQLL 481
+ +L
Sbjct: 490 FNYHIL 495
>gi|332247248|ref|XP_003272765.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3 [Nomascus leucogenys]
gi|67969340|dbj|BAE01022.1| unnamed protein product [Macaca fascicularis]
gi|355751093|gb|EHH55348.1| hypothetical protein EGM_04543 [Macaca fascicularis]
gi|380813676|gb|AFE78712.1| cleavage and polyadenylation specificity factor subunit 3 [Macaca
mulatta]
gi|383419123|gb|AFH32775.1| cleavage and polyadenylation specificity factor subunit 3 [Macaca
mulatta]
gi|384940728|gb|AFI33969.1| cleavage and polyadenylation specificity factor subunit 3 [Macaca
mulatta]
Length = 684
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 476 GKHQLL 481
+ +L
Sbjct: 490 FNYHIL 495
>gi|197102904|ref|NP_001127045.1| cleavage and polyadenylation specificity factor subunit 3 [Pongo
abelii]
gi|55733623|emb|CAH93488.1| hypothetical protein [Pongo abelii]
Length = 647
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 168 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 227
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 228 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 274
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 275 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 334
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 335 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 392
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 393 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 452
Query: 476 GKHQLL 481
+ +L
Sbjct: 453 FNYHIL 458
>gi|89267474|emb|CAJ83498.1| cleavage and polyadenylation specific factor 3 [Xenopus (Silurana)
tropicalis]
Length = 692
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 124/310 (40%), Gaps = 40/310 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 212 STYGTHIHEKREEREARFCNTVHDIVNRGGRALIPVFALGRAQELLLILDEYWQNHPELH 271
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 272 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 318
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDA---------- 362
K + ++ + P +V + ++ G + L W D N +++ V+
Sbjct: 319 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 378
Query: 363 -ELAVLPFK--PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
E+A + + P+ M V SF + Q+ ++ L+P V+ + + + + +
Sbjct: 379 EEIATMSGQKLPLKMSVDYISFSAHTDYQQTSEFVRALKPPHVILVHGEQNEM--ARLKA 436
Query: 420 FSVSHYSENE----TIHIPSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLF-VN 474
+ Y +N+ +H P E+ L + +K + +K R+ G L N
Sbjct: 437 ALIREYEDNDEVEIEVHNPRNTEAVTLNFRGEKLAKVMGLLADKKPEQGQRISGILVKRN 496
Query: 475 HGKHQLLPEN 484
H L P +
Sbjct: 497 FNYHILCPSD 506
>gi|308509314|ref|XP_003116840.1| hypothetical protein CRE_01624 [Caenorhabditis remanei]
gi|308241754|gb|EFO85706.1| hypothetical protein CRE_01624 [Caenorhabditis remanei]
Length = 612
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 62/332 (18%), Positives = 123/332 (37%), Gaps = 64/332 (19%)
Query: 92 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 151
+K+C+ KV E + L I+AF +G +GA + I ++ Y N
Sbjct: 130 IKNCMKKVIGCALHEIIQVDDQLSIRAFYAGHVLGAAMFEIRLGDHSVLYTGDYNMTPDR 189
Query: 152 AMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEK 211
+ G+ +L ++ +E ++ D E ++ V E
Sbjct: 190 HL--------GAARVLPGVRPTVLISESTYATTIRDSKRARER------DFLRKVHE--- 232
Query: 212 LAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLA 271
+V GG V+IP+ +G +L + + E +L +PIY +AE
Sbjct: 233 ----------TVMKGGKVIIPVFALGRAQELCILLESYWERMALSVPIYFSQGLAERANQ 282
Query: 272 YTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSP 330
Y W + ++ + F H++ + EK P P ++FS
Sbjct: 283 YYRLFISWTNENIKKTFVERNMFEFKHIRPM-EKGCEDQPG------------PQVLFST 329
Query: 331 HWSLRLGPTIHLLRRWSGDHNSLLVLEN------------------EVDAELAVLPFKPI 372
L G ++ + ++W GD +++++ E+D ++ I
Sbjct: 330 PGMLHGGQSLKVFKKWCGDPLNMIIMPGYCVAGTVGARVINGEKKIEIDGKM-----HDI 384
Query: 373 SMKVLQCSFLSGKKLQKVQPLLKILQPKLVLF 404
+ V SF + + + L++ +P+ V+F
Sbjct: 385 KLGVEYMSFSAHADAKGIMQLIRQCEPQHVMF 416
>gi|150400309|ref|YP_001324076.1| beta-lactamase domain-containing protein [Methanococcus vannielii
SB]
gi|150013012|gb|ABR55464.1| beta-lactamase domain protein [Methanococcus vannielii SB]
Length = 635
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 69/162 (42%), Gaps = 9/162 (5%)
Query: 197 NSLSNYDESVEEMEKLAF-ICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL 255
++ YD+ + E ++ + +++ GG V+IP+ +G +L+ +
Sbjct: 377 STYGGYDDVLPERDETEKEFLNVMLETTSRGGKVIIPVFGIGRAQELMLVLEEGYNQGIF 436
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLF-SGDPLFAHVKLIKEKKIHVFPAVHS 314
P+Y+ + E +T PE+L K + ++F GD F K K +
Sbjct: 437 NAPVYLDGMIWEATAIHT-AYPEYLSKAMRNRIFHEGDNPFLSEVFKKVKN------TND 489
Query: 315 PKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
+ +M+ E CI+ + L GP++ + + D + +V
Sbjct: 490 RRNIMDGDEACIILTTSGMLSGGPSVEYFKNLAEDEKNAIVF 531
>gi|325187176|emb|CCA21717.1| cleavage and polyadenylation specificity factor subunit putative
[Albugo laibachii Nc14]
gi|325187319|emb|CCA21858.1| cleavage and polyadenylation specificity factor subunit putative
[Albugo laibachii Nc14]
Length = 731
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 97/212 (45%), Gaps = 16/212 (7%)
Query: 148 ASGHAMDFD-YRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESV 206
ASGH + +R ++ +D I+Y+ + S + +S S + +SLS + +
Sbjct: 151 ASGHLIGGSMWRIMKETDEIIYAVDYNHRSEHVLPKSVLSSFTRPTLLITDSLSLHTKQP 210
Query: 207 EEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVA 266
+ ++ + I + ++++GG+VL+P + G L+L+ + + + L+ PI ++ ++
Sbjct: 211 KLKDRDSKIMVEILKTLRSGGNVLLPTDSAGRVLELMRVLDQYWIQNKLRDPIALLHDMS 270
Query: 267 EELLAYTNTIPEWLCKQRQEKLFSG--DPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQE 323
+ EW +Q +G +P F+H+ LI HS + L
Sbjct: 271 YYTPKAAEAMLEWCNEQIARNFDAGRQNPFQFSHIHLI-----------HSIEELEKLSS 319
Query: 324 PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLL 354
P +V + +L G L +++ D NS++
Sbjct: 320 PKVVLATSATLECGYAKELFIKYAADTRNSII 351
>gi|297619164|ref|YP_003707269.1| KH-domain/beta-lactamase-domain-containing protein [Methanococcus
voltae A3]
gi|297378141|gb|ADI36296.1| KH-domain/beta-lactamase-domain protein [Methanococcus voltae A3]
Length = 635
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 73/163 (44%), Gaps = 18/163 (11%)
Query: 197 NSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLK 256
+ L DE+ +E+ K+ +++ GG V++P+ +G +L+ +
Sbjct: 384 DVLPERDETEKELLKVIS------ETIAKGGKVILPVFGIGRAQELMLVLEEGYNQGIFN 437
Query: 257 IPIYIISSVAEELLAYTNTIPEWLCKQRQEKLF-SGD-PLFAHV-KLIKEKKIHVFPAVH 313
P+++ + E +T PE+L K + ++F GD P + V K +K+ K
Sbjct: 438 APVFLDGMIWEATAIHT-AYPEYLSKNMRNRIFHEGDNPFLSEVFKKVKDTK-------- 488
Query: 314 SPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL 356
+ ++ EPCI+ + L GP++ + + D + +V
Sbjct: 489 DRRNVIGRDEPCIILATSGMLTGGPSVEYFKTLADDEKNAIVF 531
>gi|237834371|ref|XP_002366483.1| hypothetical protein TGME49_028710 [Toxoplasma gondii ME49]
gi|211964147|gb|EEA99342.1| hypothetical protein TGME49_028710 [Toxoplasma gondii ME49]
Length = 1103
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 33/162 (20%)
Query: 227 GSVLIPINRVGV-FLQLLEQIAIFMECSSL-------------KIPIYIISSVAEELLAY 272
G+VLIP++ G+ FL++LE +A +S +P+Y + LL +
Sbjct: 356 GNVLIPLDLCGLSFLEVLETVASASSLASSLPSALATRPALLPAVPVYCVGPGLPALLQF 415
Query: 273 TNTIPEWLCKQRQEK---LFSGDPLF------AHVKLIKEKKIHVFPAVHS--------P 315
EW+ ++R E+ + S P F L+ + H AV S
Sbjct: 416 AVEAAEWVEERRAERTRDMQSPRPPFFLSACEDEELLLSGRLFHRESAVGSRTRNLIVGE 475
Query: 316 KLL--MNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLV 355
KLL M +EP I+ H SLR+G LL++W + LLV
Sbjct: 476 KLLDVMPLREPSILLLAHASLRVGEAPLLLQKWKKEETHLLV 517
>gi|315231930|ref|YP_004072366.1| polyadenylation specificity factor-like protein [Thermococcus
barophilus MP]
gi|315184958|gb|ADT85143.1| polyadenylation specificity factor-like protein [Thermococcus
barophilus MP]
Length = 648
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 78/173 (45%), Gaps = 21/173 (12%)
Query: 200 SNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPI 259
++Y E+ EK + ++K G VLIP VG +++ + + +++PI
Sbjct: 396 NDYQMPREDAEKK--LIEVIHQTIKRKGKVLIPAMAVGRAQEIMMVLEEYARVGGIEVPI 453
Query: 260 YIISSVAEELLAYTNTIPEWLCKQRQEKLFSG------DPLFAHVKLIKEKKIHVFPAVH 313
Y+ + E +T PE+L K ++++F + +F V KE++
Sbjct: 454 YLDGMIWEATAIHT-AYPEYLSKHLRDQIFHEGYNPFLNEIFKPVANSKERQD------- 505
Query: 314 SPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELA 365
+++ +EP I+ + L GP++ ++ + D NS++ + + + L
Sbjct: 506 ----IIDSEEPAIIIASSGMLVGGPSVEYFKQLAPDPRNSIIFVSYQAEGTLG 554
>gi|71795627|ref|NP_001025201.1| cleavage and polyadenylation specificity factor subunit 3 [Rattus
norvegicus]
gi|71121802|gb|AAH99817.1| Cleavage and polyadenylation specificity factor 3 [Rattus
norvegicus]
Length = 685
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMIQNGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 476 GKHQLL 481
+ +L
Sbjct: 490 FNYHIL 495
>gi|148702078|gb|EDL34025.1| cleavage and polyadenylation specificity factor 3, isoform CRA_b
[Mus musculus]
Length = 701
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 222 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 281
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 282 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 328
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 329 KSMDHFDDIGPSVVMASPGMIQNGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 388
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 389 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 446
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 447 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 506
Query: 476 GKHQLL 481
+ +L
Sbjct: 507 FNYHIL 512
>gi|221508463|gb|EEE34050.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 1103
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 33/162 (20%)
Query: 227 GSVLIPINRVGV-FLQLLEQIAIFMECSSLK-------------IPIYIISSVAEELLAY 272
G+VLIP++ G+ FL++LE +A +S +P+Y + LL +
Sbjct: 356 GNVLIPLDLCGLSFLEVLETVASASSLASSLPSALATRPALLPAVPVYCVGPGLPALLQF 415
Query: 273 TNTIPEWLCKQRQEK---LFSGDPLF------AHVKLIKEKKIHVFPAVHS--------P 315
EW+ ++R E+ + S P F L+ + H AV S
Sbjct: 416 AVEAAEWVEERRAERTRDMQSPRPPFFLSACEDEELLLSGRLFHRESAVGSRTRNLIVGE 475
Query: 316 KLL--MNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLV 355
KLL M +EP I+ H SLR+G LL++W + LLV
Sbjct: 476 KLLDVMPLREPSILLLAHASLRVGEAPLLLQKWKKEETHLLV 517
>gi|2394306|gb|AAB70268.1| 73 kDA subunit of cleavage and polyadenylation specificity factor
[Homo sapiens]
Length = 379
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 60/306 (19%), Positives = 119/306 (38%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 86 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELX 145
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
PIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 146 DXPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 192
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 193 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 252
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 253 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 310
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 311 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 370
Query: 476 GKHQLL 481
+ +L
Sbjct: 371 FNYHIL 376
>gi|31980904|ref|NP_061283.2| cleavage and polyadenylation specificity factor subunit 3 [Mus
musculus]
gi|341940395|sp|Q9QXK7.2|CPSF3_MOUSE RecName: Full=Cleavage and polyadenylation specificity factor
subunit 3; AltName: Full=Cleavage and polyadenylation
specificity factor 73 kDa subunit; Short=CPSF 73 kDa
subunit; Short=mRNA 3'-end-processing endonuclease
CPSF-73
gi|23271024|gb|AAH23297.1| Cleavage and polyadenylation specificity factor 3 [Mus musculus]
Length = 684
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMIQNGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 476 GKHQLL 481
+ +L
Sbjct: 490 FNYHIL 495
>gi|336121952|ref|YP_004576727.1| KH-domain/beta-lactamase-domain-containing protein
[Methanothermococcus okinawensis IH1]
gi|334856473|gb|AEH06949.1| KH-domain/beta-lactamase-domain protein [Methanothermococcus
okinawensis IH1]
Length = 635
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 61/137 (44%), Gaps = 8/137 (5%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 280
+++K G V+IP+ +G +L+ + P+Y+ + E +T PE+L
Sbjct: 402 ETIKRKGKVIIPVFGIGRAQELMLVLEEGYNQGIFNAPVYLDGMIWEATAIHT-AYPEYL 460
Query: 281 CKQRQEKLF-SGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPT 339
K + ++F GD F K K ++ + +++ EPCI+ + L GP+
Sbjct: 461 SKNIRNRIFHEGDNPFLSEVFRKVKN------TNNRRNIIDSNEPCIILTTSGMLSGGPS 514
Query: 340 IHLLRRWSGDHNSLLVL 356
+ + + D + +V
Sbjct: 515 VEYFKSLAEDEKNAIVF 531
>gi|150400487|ref|YP_001324253.1| beta-lactamase domain-containing protein [Methanococcus aeolicus
Nankai-3]
gi|150013190|gb|ABR55641.1| beta-lactamase domain protein [Methanococcus aeolicus Nankai-3]
Length = 635
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 64/138 (46%), Gaps = 10/138 (7%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 280
+++K G ++IP+ +G +L+ + P+Y+ + E +T PE+L
Sbjct: 402 ETIKRKGKIIIPVFGIGRAQELMLVLEEGYNQGIFNAPVYLDGMIWEATAIHT-AYPEYL 460
Query: 281 CKQRQEKLF-SGD-PLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGP 338
K + ++F GD P + V KK+ ++ + +++ EPCI+ + L GP
Sbjct: 461 SKNMRNRIFHEGDNPFLSEVF----KKVR---NTNNRRNIIDSDEPCIILTTSGMLSGGP 513
Query: 339 TIHLLRRWSGDHNSLLVL 356
++ + + D + +V
Sbjct: 514 SVEYFKSLAHDERNAIVF 531
>gi|344280152|ref|XP_003411849.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-like [Loxodonta africana]
Length = 903
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 424 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 483
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 484 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 530
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 531 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 590
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 591 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 648
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 649 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 708
Query: 476 GKHQLL 481
+ +L
Sbjct: 709 FNYHIL 714
>gi|74178650|dbj|BAE33998.1| unnamed protein product [Mus musculus]
Length = 684
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMIQNGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLRA 429
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 476 GKHQLL 481
+ +L
Sbjct: 490 FNYHIL 495
>gi|67969643|dbj|BAE01170.1| unnamed protein product [Macaca fascicularis]
Length = 684
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 476 GKHQLL 481
+ +L
Sbjct: 490 FNYHIL 495
>gi|444731702|gb|ELW72051.1| Cleavage and polyadenylation specificity factor subunit 3 [Tupaia
chinensis]
Length = 587
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 108 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 167
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 168 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 214
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 215 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 274
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 275 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 332
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 333 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 392
Query: 476 GKHQLL 481
+ +L
Sbjct: 393 FNYHIL 398
>gi|149641381|ref|XP_001505542.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-like, partial [Ornithorhynchus anatinus]
Length = 595
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 121/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 116 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 175
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 176 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 222
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 223 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 282
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + + +
Sbjct: 283 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEM--ARLKA 340
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 341 ALIREYEDNDDVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 400
Query: 476 GKHQLL 481
+ +L
Sbjct: 401 FNYHIL 406
>gi|354504216|ref|XP_003514173.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3 [Cricetulus griseus]
Length = 684
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMIQNGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 476 GKHQLL 481
+ +L
Sbjct: 490 FNYHIL 495
>gi|221486709|gb|EEE24970.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 1103
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 33/162 (20%)
Query: 227 GSVLIPINRVGV-FLQLLEQIAIFMECSSLK-------------IPIYIISSVAEELLAY 272
G+VLIP++ G+ FL++LE +A +S +P+Y + LL +
Sbjct: 356 GNVLIPLDLCGLSFLEVLETVASASSLASSLPSALATRPALLPAVPVYCVGPGLPALLQF 415
Query: 273 TNTIPEWLCKQRQEK---LFSGDPLF------AHVKLIKEKKIHVFPAVHS--------P 315
EW+ ++R E+ + S P F L+ + H AV S
Sbjct: 416 AVEAAEWVEERRAERTRDMQSPRPPFFLSACEDEELLLSGRLFHRESAVGSRTRNLIVGE 475
Query: 316 KLL--MNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLV 355
KLL M +EP I+ H SLR+G LL++W + LLV
Sbjct: 476 KLLDVMPLREPSILLLAHASLRVGEAPLLLQKWKKEETHLLV 517
>gi|344257704|gb|EGW13808.1| Cleavage and polyadenylation specificity factor subunit 3
[Cricetulus griseus]
Length = 647
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 168 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 227
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 228 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 274
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 275 KSMDHFDDIGPSVVMASPGMIQNGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 334
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 335 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 392
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 393 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 452
Query: 476 GKHQLL 481
+ +L
Sbjct: 453 FNYHIL 458
>gi|149050991|gb|EDM03164.1| cleavage and polyadenylation specificity factor 3, isoform CRA_a
[Rattus norvegicus]
Length = 685
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMIQNGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 476 GKHQLL 481
+ +L
Sbjct: 490 FNYHIL 495
>gi|156096985|ref|XP_001614526.1| RNA-metabolising metallo-beta-lactamase domain containing protein
[Plasmodium vivax Sal-1]
gi|148803400|gb|EDL44799.1| RNA-metabolising metallo-beta-lactamase domain containing protein
[Plasmodium vivax]
Length = 911
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 106/272 (38%), Gaps = 41/272 (15%)
Query: 194 ELMNSLSNYDESVEEMEKLA--FICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFME 251
E+ S S Y V K + +C+ + V GG VLIP+ +G +L + + +
Sbjct: 274 EIFISESTYATYVRPTRKASELDLCNLVHECVHKGGKVLIPVFAIGRAQELSILLDSYWK 333
Query: 252 CSSLKIPIYIISSVAEELLAYTNTIPEWL---CKQRQEK-LFSGDPLFAHVKLIKEKKIH 307
+ PIY + E Y W+ C +K LF FA++
Sbjct: 334 KMKINYPIYFGCGLTENANKYYRIYSSWVNSSCVSTDKKNLFD----FANIS-------- 381
Query: 308 VFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL-----ENEVDA 362
P V+S + P ++F+ L G ++ + WSG +L+VL + V
Sbjct: 382 --PFVNS---YLGENRPMVLFATPGMLHTGLSLKAFKAWSGCSKNLIVLPGYCVQGTVGH 436
Query: 363 ELAVLPFK---------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVS 413
+L + K ++ +++ SF + +Q L++ + P+ VLF +
Sbjct: 437 KLIMGERKISFDGNTYLNVACRIIYLSFSAHADSNGIQQLIRHVLPQNVLFVHGEKH--G 494
Query: 414 FSDVTSFSVSHYSENETIHIPSLKESAELEIA 445
++ SHY N PSL + E +
Sbjct: 495 MEKLSKHIASHYLINSL--CPSLGQHCEFSFS 524
>gi|71682600|gb|AAI00570.1| Cpsf3 protein [Mus musculus]
Length = 512
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 110/278 (39%), Gaps = 39/278 (14%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMIQNGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYVSFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQ 453
+ Y +N+ +HI P E+ L + +K Q
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVQ 467
>gi|32564696|ref|NP_495706.2| Protein F10B5.8 [Caenorhabditis elegans]
gi|26985793|emb|CAB54223.2| Protein F10B5.8 [Caenorhabditis elegans]
Length = 608
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 100/266 (37%), Gaps = 41/266 (15%)
Query: 92 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 151
+K+C+ KV E + L I+AF +G +GA + I ++ Y
Sbjct: 130 IKNCMKKVVGCALHEIIHVDNELSIRAFYAGHVLGAAMFEIRLGDHSVLYTG-------- 181
Query: 152 AMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEK 211
DY L L + T I +S+++ + + E +
Sbjct: 182 ----DYNMTPDRHLGAARVLPGVRPTVLISESTYATTIRD-----------SKRARERDF 226
Query: 212 LAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLA 271
L + C V GG V+IP+ +G +L + + E +L +PIY +AE
Sbjct: 227 LRKVHEC----VMKGGKVIIPVFALGRAQELCILLESYWERMALNVPIYFSQGLAERANQ 282
Query: 272 YTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSP 330
Y W + ++ + F H+K + EK P P ++FS
Sbjct: 283 YYRLFISWTNENIKKTFVERNMFEFKHIKPM-EKGCEDQPG------------PQVLFST 329
Query: 331 HWSLRLGPTIHLLRRWSGDHNSLLVL 356
L G ++ + ++W D +++++
Sbjct: 330 PGMLHGGQSLKVFKKWCSDPLNMIIM 355
>gi|149050992|gb|EDM03165.1| cleavage and polyadenylation specificity factor 3, isoform CRA_b
[Rattus norvegicus]
Length = 605
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMIQNGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 476 GKHQLL 481
+ +L
Sbjct: 490 FNYHIL 495
>gi|74211665|dbj|BAE29190.1| unnamed protein product [Mus musculus]
Length = 684
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYRTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMIQNGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 430 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 489
Query: 476 GKHQLL 481
+ +L
Sbjct: 490 FNYHIL 495
>gi|268530366|ref|XP_002630309.1| Hypothetical protein CBG00745 [Caenorhabditis briggsae]
Length = 637
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 62/332 (18%), Positives = 122/332 (36%), Gaps = 64/332 (19%)
Query: 92 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 151
+K+C+ KV E + L I+AF +G +GA + I ++ Y N
Sbjct: 156 IKNCMKKVIGCALHEIIQVDDQLSIRAFYAGHVLGAAMFEIRVGDHSVLYTGDYNMTPDR 215
Query: 152 AMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEK 211
+ G+ +L ++ +E ++ D E ++ V E
Sbjct: 216 HL--------GAARVLPGVRPTILISESTYATTIRDSKRARER------DFLRKVHE--- 258
Query: 212 LAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLA 271
+V GG V+IP+ +G +L + + E +L +PIY +AE
Sbjct: 259 ----------TVMKGGKVIIPVFALGRAQELCILLESYWERMALNVPIYFSQGLAERANQ 308
Query: 272 YTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSP 330
Y W + ++ + F H++ + EK P P ++FS
Sbjct: 309 YYRLFISWTNENIKKTFVERNMFEFKHIRPM-EKGCEDQPG------------PQVLFST 355
Query: 331 HWSLRLGPTIHLLRRWSGDHNSLLVLEN------------------EVDAELAVLPFKPI 372
L G ++ + ++W D +++++ E+D ++ I
Sbjct: 356 PGMLHGGQSLKVFKKWCSDPLNMIIMPGYCVAGTVGARVINGEKRIEIDGKV-----HEI 410
Query: 373 SMKVLQCSFLSGKKLQKVQPLLKILQPKLVLF 404
+ V SF + + + L++ +PK V+F
Sbjct: 411 KLGVEYMSFSAHADAKGIMQLIRQCEPKHVMF 442
>gi|393232375|gb|EJD39957.1| cyclic beta-1, 2 glucan synthetase, putative, cgs94A [Auricularia
delicata TFB-10046 SS5]
Length = 768
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 8/69 (11%)
Query: 514 GINGSVERCMTDAE------SEDG--FTVKVQDPEKSMIEVRAAVTVISAADKNLASRIV 565
G+N +V + M D + ++DG F VKV D K + ++ + AADK+ + RIV
Sbjct: 501 GLNAAVNKHMWDGDWFGRGITDDGVLFGVKVDDEGKIYLNPQSFALMGGAADKDQSDRIV 560
Query: 566 KAMENILEG 574
+A+E LEG
Sbjct: 561 RAVEQHLEG 569
>gi|284161558|ref|YP_003400181.1| RNA-metabolising metallo-beta-lactamase [Archaeoglobus profundus
DSM 5631]
gi|284011555|gb|ADB57508.1| RNA-metabolising metallo-beta-lactamase [Archaeoglobus profundus
DSM 5631]
Length = 631
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 63/142 (44%), Gaps = 17/142 (11%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEW 279
+++ GG VLIP VG +++ + + + ++P+YI + E +T PE+
Sbjct: 398 ETISKGGKVLIPAFAVGRSQEVMIVLEEAIRTKKIDEVPVYIDGMIYEATAIHT-AYPEY 456
Query: 280 LCKQRQEKLFSG--DPLFAHVKLIKEKKIHVFPAVHSP---KLLMNWQEPCIVFSPHWSL 334
L ++ +F +P + F V SP + +++ EPC++ S L
Sbjct: 457 LNAHLRDLIFHQGINPFISES----------FVRVDSPSKRQEVIDSSEPCVIISTSGML 506
Query: 335 RLGPTIHLLRRWSGDHNSLLVL 356
GP + R +GD + +V
Sbjct: 507 NGGPVMEYFRALAGDEKNTIVF 528
>gi|341903207|gb|EGT59142.1| hypothetical protein CAEBREN_31222 [Caenorhabditis brenneri]
Length = 571
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 61/332 (18%), Positives = 121/332 (36%), Gaps = 64/332 (19%)
Query: 92 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 151
+K+C+ K E + L I+AF +G +GA + I ++ Y N
Sbjct: 133 IKNCMKKCIGCALHEVIQVDDQLSIRAFYAGHVLGAAMFEIRVGDHSVLYTGDYNMTPDR 192
Query: 152 AMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEK 211
+ G+ +L ++ +E ++ D E ++ V E
Sbjct: 193 HL--------GAARVLPGVRPTVLISESTYATTIRDSKRARER------DFLRKVHE--- 235
Query: 212 LAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLA 271
SV GG V+IP+ +G +L + + E +L +PIY +AE
Sbjct: 236 ----------SVMKGGKVIIPVFALGRAQELCILLESYWERMALTVPIYFSQGLAERANQ 285
Query: 272 YTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSP 330
Y W + ++ + F H++ + EK P P ++FS
Sbjct: 286 YYRLFISWTNENIKKTFVERNMFEFKHIRPM-EKGCEDMPG------------PQVLFST 332
Query: 331 HWSLRLGPTIHLLRRWSGDHNSLLVLEN------------------EVDAELAVLPFKPI 372
L G ++ + ++W D +++++ E+D ++ I
Sbjct: 333 PGMLHGGQSLKVFKKWCSDPINMIIMPGYCVAGTVGAKVINGEKRIEIDGKM-----HDI 387
Query: 373 SMKVLQCSFLSGKKLQKVQPLLKILQPKLVLF 404
+ V SF + + + L++ +P+ V+F
Sbjct: 388 RLGVEYMSFSAHADAKGIMQLIRQCEPQHVMF 419
>gi|355680849|gb|AER96661.1| cleavage and polyadenylation specific factor 3, 73kDa [Mustela
putorius furo]
Length = 600
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 39/306 (12%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 154 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 213
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 214 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 260
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 261 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 320
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 321 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVVLVHGEQN--EMARLKA 378
Query: 420 FSVSHYSENETIHI----PSLKESAELEIAADIASKFQWRMLKQKKLNITRLKGRLFVNH 475
+ Y +N+ +HI P E+ L + +K + +K R+ G L +
Sbjct: 379 ALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRN 438
Query: 476 GKHQLL 481
+ +L
Sbjct: 439 FNYHIL 444
>gi|312136618|ref|YP_004003955.1| kh-domain/beta-lactamase-domain-containing protein [Methanothermus
fervidus DSM 2088]
gi|311224337|gb|ADP77193.1| KH-domain/beta-lactamase-domain protein [Methanothermus fervidus
DSM 2088]
Length = 650
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 12/139 (8%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEW 279
D++K GG VLIP+ VG +L+ + +++ L +IPI++ V E +T T PE+
Sbjct: 418 DTIKRGGKVLIPVFAVGRAQELMVVLDEYIKSGILEEIPIFVDGMVWEATAIHT-TRPEY 476
Query: 280 LCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNW--QEPCIVFSPHWSLRLG 337
L K +++F + + E +F V S + EPC++ S L G
Sbjct: 477 LSKTLSDQIFH----YGYNPFTSE----IFNKVSSSDERKDVVEGEPCVILSTSGMLAGG 528
Query: 338 PTIHLLRRWSGDHNSLLVL 356
++ + D + LV
Sbjct: 529 NSVEYFKWLCEDEKNTLVF 547
>gi|341890123|gb|EGT46058.1| hypothetical protein CAEBREN_05882 [Caenorhabditis brenneri]
Length = 618
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 61/332 (18%), Positives = 121/332 (36%), Gaps = 64/332 (19%)
Query: 92 VKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGH 151
+K+C+ K E + L I+AF +G +GA + I ++ Y N
Sbjct: 130 IKNCMKKCIGCALHEVIQVDDQLSIRAFYAGHVLGAAMFEIRVGDHSVLYTGDYNMTPDR 189
Query: 152 AMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEK 211
+ G+ +L ++ +E ++ D E ++ V E
Sbjct: 190 HL--------GAARVLPGVRPTVLISESTYATTIRDSKRARER------DFLRKVHE--- 232
Query: 212 LAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLA 271
SV GG V+IP+ +G +L + + E +L +PIY +AE
Sbjct: 233 ----------SVMKGGKVIIPVFALGRAQELCILLESYWERMALTVPIYFSQGLAERANQ 282
Query: 272 YTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSP 330
Y W + ++ + F H++ + EK P P ++FS
Sbjct: 283 YYRLFISWTNENIKKTFVERNMFEFKHIRPM-EKGCEDMPG------------PQVLFST 329
Query: 331 HWSLRLGPTIHLLRRWSGDHNSLLVLEN------------------EVDAELAVLPFKPI 372
L G ++ + ++W D +++++ E+D ++ I
Sbjct: 330 PGMLHGGQSLKVFKKWCSDPINMIIMPGYCVAGTVGAKVINGEKRIEIDGKM-----HDI 384
Query: 373 SMKVLQCSFLSGKKLQKVQPLLKILQPKLVLF 404
+ V SF + + + L++ +P+ V+F
Sbjct: 385 RLGVEYMSFSAHADAKGIMQLIRQCEPQHVMF 416
>gi|126030713|pdb|2I7T|A Chain A, Structure Of Human Cpsf-73
gi|126030714|pdb|2I7V|A Chain A, Structure Of Human Cpsf-73
Length = 459
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 102/254 (40%), Gaps = 35/254 (13%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 420 FSVSHYSENETIHI 433
+ Y +N+ +HI
Sbjct: 430 ALIREYEDNDEVHI 443
>gi|390933363|ref|YP_006390868.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389568864|gb|AFK85269.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 820
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 101/252 (40%), Gaps = 41/252 (16%)
Query: 114 LIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDL-ILYSDLS 172
L + +S+G GA + I G GS F SG F I+G+ + L D++
Sbjct: 140 LKVTFYSAGHIAGAASIYIVGN-------GGSFFYSGDFSRFRQNTIEGASIPKLRPDVA 192
Query: 173 SLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIP 232
+ST + D + EL E +EK+ + VK GG VLIP
Sbjct: 193 FFEST-------YGDKLHANREL--------EESRLVEKIGSV-------VKNGGKVLIP 230
Query: 233 INRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGD 292
+G +++ + + + +Y+ V + Y P +L + +K+F G
Sbjct: 231 AFALGRAQEIILILKKAINKGMINTKVYVDGMVKDICRIYKLN-PNYLRENLAKKIFKGG 289
Query: 293 PLFAHVKLIKEKKIHVFPAVHSPKLLMNW-QEPCIVFSPHWSLRLGPTIHLLRRWSGDHN 351
+F +V P V P++ +EPC++ S L GP+ + +GD
Sbjct: 290 EIFFDG--------NVMP-VDMPEMREEIIKEPCVIVSSSGMLTGGPSQWYAEKLAGDEK 340
Query: 352 SLLVLENEVDAE 363
+L+ + D E
Sbjct: 341 NLIAITGYQDEE 352
>gi|213407230|ref|XP_002174386.1| cleavage factor two Cft2/polyadenylation factor CPSF-73
[Schizosaccharomyces japonicus yFS275]
gi|212002433|gb|EEB08093.1| cleavage factor two Cft2/polyadenylation factor CPSF-73
[Schizosaccharomyces japonicus yFS275]
Length = 786
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 85/199 (42%), Gaps = 27/199 (13%)
Query: 88 CIAHVKDCISKVQTLRFGEEACY----NGILIIKAFSSGLDIGACNWIISGAKGNIAYIS 143
IA V + TLR+ + A NGI I AF++G +G W I+ ++ Y
Sbjct: 101 TIADVDLVFDSITTLRYSQPASLMGKCNGI-NITAFNAGHTLGGTLWSITKESESLVYAV 159
Query: 144 GSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYD 203
N H+ D + + G+ LYS+ L+ ++ D NN + + D
Sbjct: 160 DWN----HSKD---KHLNGT--ALYSNGQILEIL--TRPNTLVTDANNALISIPARKKRD 208
Query: 204 ESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--LKIPIYI 261
E++ E + ++ GGSVL+P++ ++L + S L PIY
Sbjct: 209 EALIE---------AVMSTLLKGGSVLLPMDAASRVIELCYFLDTHWASSQPPLSFPIYF 259
Query: 262 ISSVAEELLAYTNTIPEWL 280
+S + + + Y ++ EW+
Sbjct: 260 LSYSSAKTIGYAKSMIEWM 278
>gi|342319748|gb|EGU11695.1| Endoribonuclease YSH1 [Rhodotorula glutinis ATCC 204091]
Length = 857
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 146/384 (38%), Gaps = 70/384 (18%)
Query: 2 GMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMN--MEYRQFYGAEESSGPQWM- 58
GM LPFL ++ + T A I ++ C+ ME F +E +G +M
Sbjct: 67 GMAALPFLDELD------WSTVDAILITHFHLDHAACLTYVMEKTNF---KEGNGVVYMS 117
Query: 59 ---KWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEE------AC 109
K L+ +R G D + + + ++Q+ F +E +
Sbjct: 118 HPTKAVYRYLMSDFVRVSTAGSDDNLF-----TESEMLASFDQIQSFDFEQEILLPPSST 172
Query: 110 YNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS 169
+ + +F++G +GAC ++I A + Y DY
Sbjct: 173 SSASVRFTSFAAGHVLGACMFLIEVAGARVLYTG------------DY------------ 208
Query: 170 DLSSLDSTEDIDQSSFSDDNNNWE---ELMNSLSNYDESVEE--MEKLAFICSCAIDSVK 224
STE+ D+ NWE ++M S Y E +EK A + +K
Sbjct: 209 ------STEE-DRHLVPAKVPNWERPPDVMICESTYGVQSHEPRLEKEAQFTNLVRSILK 261
Query: 225 AGGSVLIPINRVGVFLQLLEQIAIF-MECSSLK-IPIYIISSVAEELLAYTNTIPEWLCK 282
GG VL+P+ +G +LL + + E L+ IPIY +SS+A + + +
Sbjct: 262 RGGRVLLPVFALGRAQELLLILDEYWAEHPELQHIPIYYVSSLAIKCMDVYRQYIHTMSP 321
Query: 283 QRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHL 342
+ K G F K K + P L N + PC+V + L G + L
Sbjct: 322 NVRSKFARGINPFD----FKRKDSFIRPLDRGISKL-NDRNPCVVMASPGFLTSGVSREL 376
Query: 343 LRRWSGD-HNSLLVLENEVDAELA 365
L +W+ D N L++ V+ +A
Sbjct: 377 LEKWAPDPRNGLIITGYSVEGVMA 400
>gi|304317834|ref|YP_003852979.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779336|gb|ADL69895.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 820
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 102/252 (40%), Gaps = 41/252 (16%)
Query: 114 LIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDL-ILYSDLS 172
L + +S+G GA + I G +G S F SG F I+G+ + L D++
Sbjct: 140 LKVTFYSAGHIAGAASIYIVGNEG-------SFFYSGDFSRFRQNTIEGASIPKLRPDVA 192
Query: 173 SLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIP 232
+ST + D + EL E +EK+ + VK GG VLIP
Sbjct: 193 FFEST-------YGDKLHANREL--------EESRLVEKIGSV-------VKNGGKVLIP 230
Query: 233 INRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGD 292
+G +++ + + + +Y+ V + Y P +L + +K+F G
Sbjct: 231 AFALGRAQEIILILKKAINKGMINTKVYVDGMVKDICRIYKLN-PNYLRENLAKKIFKGG 289
Query: 293 PLFAHVKLIKEKKIHVFPAVHSPKLLMNW-QEPCIVFSPHWSLRLGPTIHLLRRWSGDHN 351
+F +V P V P++ +EPC++ S L GP+ + +GD
Sbjct: 290 EIFFDD--------NVMP-VDIPEMREEIIKEPCVIVSSSGMLTGGPSQWYAEKLAGDEK 340
Query: 352 SLLVLENEVDAE 363
+L+ + D E
Sbjct: 341 NLIAITGYQDEE 352
>gi|403270697|ref|XP_003927303.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3 [Saimiri boliviensis boliviensis]
Length = 658
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 102/254 (40%), Gaps = 35/254 (13%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 209 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 268
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 269 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 315
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 316 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 375
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 376 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 433
Query: 420 FSVSHYSENETIHI 433
+ Y +N+ +HI
Sbjct: 434 ALIREYEDNDEVHI 447
>gi|385806123|ref|YP_005842521.1| beta-lactamase [Fervidicoccus fontis Kam940]
gi|383795986|gb|AFH43069.1| beta-lactamase domain protein [Fervidicoccus fontis Kam940]
Length = 619
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 88/217 (40%), Gaps = 42/217 (19%)
Query: 222 SVKAGGSVLIPINRVG----VFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIP 277
+V+ GG +L+P+ VG + L L E F + IP+YI V E +T+ P
Sbjct: 381 TVQRGGKILVPVMSVGRGQEIMLILSEA---FSKGQLQDIPVYIEGMVTEVTALHTHY-P 436
Query: 278 EWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEP--CIVFSPHWSLR 335
E + + ++ + G+ F + F V S EP CI+ + L
Sbjct: 437 ELMSQSVEKAIHLGENPFMNKN---------FVVVQSKDKRSEALEPGPCIILATSGMLN 487
Query: 336 LGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFKPISMKVLQCSFLSGKKLQKVQPLL 394
GP++ L+ + D NSL+ + +V+ L G+K++ Q L
Sbjct: 488 GGPSVEYLKSLAEDPKNSLIFVSYQVEGTL-------------------GRKIKDGQKEL 528
Query: 395 KILQPKLVLFPEEWRTHVSFSDVTSFSVSHYSENETI 431
L P + E + ++ + FS H +NE I
Sbjct: 529 TFLNPDGKI--ETIKINMEIHSIEGFS-GHSDKNELI 562
>gi|449518964|ref|XP_004166505.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 3-II-like, partial [Cucumis
sativus]
Length = 472
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 87/213 (40%), Gaps = 31/213 (14%)
Query: 207 EEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVA 266
E E L + +C + +GG VLIP +G +L + + E +LK PIY+ + +
Sbjct: 60 REREFLKAVHNC----LASGGKVLIPTFALGRAQELCVLLDDYWERMNLKFPIYVSAGLT 115
Query: 267 EELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCI 326
+ Y + W ++ +E + + K + F + +++ PC+
Sbjct: 116 VQANMYYKMLISWTSQKVKETYTTRNAF-------DFKNVQKF-----DRSMIDAPGPCV 163
Query: 327 VFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAELA---VLPFKP------------ 371
+F+ + G ++ + +RW+ +L+ L A ++ KP
Sbjct: 164 LFATPGMISSGFSLEVFKRWAPSKLNLITLPGYCVAGTVGHKLMSGKPTKIDLDKVTQID 223
Query: 372 ISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLF 404
+ +V Q +F + + L+K L PK V+
Sbjct: 224 VQCQVHQLAFSPHTDSKGIMDLVKFLSPKHVIL 256
>gi|410955844|ref|XP_003984560.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3 [Felis catus]
Length = 686
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 102/254 (40%), Gaps = 35/254 (13%)
Query: 200 SNYDESVEEM--EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--L 255
S Y + E E+ A C+ D V GG LIP+ +G +LL + + +
Sbjct: 205 STYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELH 264
Query: 256 KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP 315
IPIY SS+A++ +A T + + ++++ +P VF + +
Sbjct: 265 DIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF-------------VFKHISNL 311
Query: 316 KLLMNWQE--PCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFK-- 370
K + ++ + P +V + ++ G + L W D N +++ V+ LA
Sbjct: 312 KSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEP 371
Query: 371 -----------PISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLFPEEWRTHVSFSDVTS 419
P+ M V SF + Q+ ++ L+P V+ + + + +
Sbjct: 372 EEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQN--EMARLKA 429
Query: 420 FSVSHYSENETIHI 433
+ Y +N+ +HI
Sbjct: 430 ALIREYEDNDEVHI 443
>gi|320163729|gb|EFW40628.1| cleavage and polyadenylation specificity factor [Capsaspora
owczarzaki ATCC 30864]
Length = 744
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 109/291 (37%), Gaps = 50/291 (17%)
Query: 84 GGCP-CIAHVKDCISKVQTLRFGEE------ACYNGILIIKAFSSGLDIGACNWIISGAK 136
G P + V ++ TL+F + A I II ++G +G W I
Sbjct: 20 GALPFTLDDVDAAFERITTLKFQQRVVVPLGAKTKPITII-PHAAGHMVGGTIWRIITEG 78
Query: 137 GNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELM 196
+I Y N H ++ + DL Y S L S
Sbjct: 79 EDIVYAVDFN----HQLERHLNPTELKDLFQYERPSILIS-------------------- 114
Query: 197 NSLSNYDESVEEMEKLAFICSCAIDSV------KAGGSVLIPINRVGVFLQLLEQIAIFM 250
NS + ESV + ++++ AGGSVLIP + G L+L + +
Sbjct: 115 NSFNYGAESVPRKTRDRLFLDSIVNTLINPKDGSAGGSVLIPTDTAGRVLELAQVLDKQW 174
Query: 251 ECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFS--GDPL-FAHVKLIKEKKIH 307
E PI ++S ++ ++ + EW+ + Q++ + +P FAH+K+ +
Sbjct: 175 EKYK-NFPIVVLSHISRTVMNFAMAQIEWMSAKMQKEFETTRSNPFSFAHIKMCQ----- 228
Query: 308 VFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLEN 358
+ + P +V + L G L+ +W+ + +L++ N
Sbjct: 229 ---TMEELAQVAKEGTPVVVLASMEGLTSGFARDLMLKWAENPKNLIIFPN 276
>gi|401827745|ref|XP_003888165.1| putative RNA-processing beta-lactamase-fold exonuclease
[Encephalitozoon hellem ATCC 50504]
gi|392999365|gb|AFM99184.1| putative RNA-processing beta-lactamase-fold exonuclease
[Encephalitozoon hellem ATCC 50504]
Length = 643
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 28/187 (14%)
Query: 210 EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFME------CSSLKIPIYIIS 263
E+ S + V+ GG L+P+ +G +LL + +E S KIPIY S
Sbjct: 212 EREGRFTSIVQNVVQRGGRCLLPVFALGRAQELL----LILEEHWGSNASLQKIPIYYAS 267
Query: 264 SVAEELLAYTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQ 322
++A+ + T + ++ Q+ +P F +VK +K + S + +
Sbjct: 268 ALAKRCMGVYQTYIGMMNERIQKLSLVRNPFAFKYVKNLK--------GIDS----FDDE 315
Query: 323 EPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFKPISMKVLQCSF 381
PC++ + L+ G + L RW D N++++ VD LA K I + +
Sbjct: 316 GPCVIMASPGMLQSGLSRDLFERWCSDSRNAVIIPGYCVDGTLA----KEILSEPKEIEA 371
Query: 382 LSGKKLQ 388
L+GKKL+
Sbjct: 372 LNGKKLR 378
>gi|322790916|gb|EFZ15582.1| hypothetical protein SINV_14424 [Solenopsis invicta]
Length = 277
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 63/138 (45%), Gaps = 16/138 (11%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 280
+ + GG VLIP+ +G +L + + E +LK+P+Y + E+ Y W
Sbjct: 4 ECIDRGGKVLIPVFALGRAQELCILLETYWERMNLKVPVYFALGLTEKANNYYKMFITW- 62
Query: 281 CKQRQEKLFSGDPL--FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGP 338
Q+ +K F + F H+K + I +P + +VF+ L G
Sbjct: 63 TNQKIKKTFVQRNMFDFKHIKPFDKAYI------DNPGAM-------VVFATPGMLHAGL 109
Query: 339 TIHLLRRWSGDHNSLLVL 356
++ + ++W+ + ++++++
Sbjct: 110 SLQIFKKWAPNESNMVIM 127
>gi|308198072|ref|XP_001387057.2| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|149389019|gb|EAZ63034.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 934
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 102/231 (44%), Gaps = 28/231 (12%)
Query: 109 CYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILY 168
++ ++I +++G +G W+I+ + Y N H+ D + G+ +
Sbjct: 140 VFDNKVVITPYNAGHTLGGTFWLITKRSDRVIYAPAWN----HSKD---SFLNGASFLSS 192
Query: 169 SDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKA-GG 227
S + L ++ + ++F + M S+ ++ + E+ +L +D+ A GG
Sbjct: 193 SSGNPL--SQLLRPTAFITSTD-----MGSVMSHKKRTEKFLQL-------VDATLANGG 238
Query: 228 SVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEK 287
+ +IP + G FL+L I ++ + IP+Y +S ++L+Y + + +W+ Q +
Sbjct: 239 AAVIPTSLSGRFLELFHLIDEHLQGAP--IPVYFLSYSGTKVLSYASNLIDWMSSSVQSQ 296
Query: 288 LFSGDPLFAHVKL-IKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLG 337
+ + L K+ + + SP+ L+ P IVF LR G
Sbjct: 297 WEEAESSTNYKNLPFDPSKVDL---LLSPEELIQLSGPKIVFCSGIDLRNG 344
>gi|332030612|gb|EGI70300.1| Integrator complex subunit 11 [Acromyrmex echinatior]
Length = 536
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 63/138 (45%), Gaps = 16/138 (11%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 280
+ + GG VLIP+ +G +L + + E +LK+P+Y + E+ Y W
Sbjct: 168 ECIDRGGKVLIPVFALGRAQELCILLETYWERMNLKVPVYFALGLTEKANNYYKMFITW- 226
Query: 281 CKQRQEKLFSGDPL--FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGP 338
Q+ +K F + F H+K + I +P + +VF+ L G
Sbjct: 227 TNQKIKKTFVQRNMFDFKHIKPFDKAYI------DNPGAM-------VVFATPGMLHAGL 273
Query: 339 TIHLLRRWSGDHNSLLVL 356
++ + ++W+ + ++++++
Sbjct: 274 SLQIFKKWAPNESNMVIM 291
>gi|345018855|ref|YP_004821208.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter
wiegelii Rt8.B1]
gi|344034198|gb|AEM79924.1| RNA-metabolising metallo-beta-lactamase [Thermoanaerobacter
wiegelii Rt8.B1]
Length = 829
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 103/250 (41%), Gaps = 41/250 (16%)
Query: 116 IKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDL-ILYSDLSSL 174
+ + +G +GA + I+ +G++ F SG F I+G+ + L D++
Sbjct: 142 VTLYPAGHILGAASVYITSEEGSV-------FYSGDFSGFRQNTIEGAFIPKLRPDVAIF 194
Query: 175 DSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPIN 234
+ST + D + EL E +EK++ I + GG V+IP
Sbjct: 195 EST-------YGDKLHANREL--------EETRLIEKVSSI-------INEGGKVIIPAF 232
Query: 235 RVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL 294
+G +++ + + LK +Y+ V E Y P +L + +K+F G+ +
Sbjct: 233 ALGRAQEIILILKKAINKGILKTKVYVDGMVREVCRVYKLN-PNYLRQNLAKKIFKGNDI 291
Query: 295 FAHVKLIKEKKIHVFPAVHSPKLLMN-WQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSL 353
F +I AV P++ +E C++ S + GP+ + + + D +L
Sbjct: 292 FFDDNVI---------AVEKPEMREEIIKESCVILSSSGMITGGPSQWYVEKLAQDEKNL 342
Query: 354 LVLENEVDAE 363
+ + D E
Sbjct: 343 IAITGYQDEE 352
>gi|60681353|ref|YP_211497.1| hypothetical protein BF1862 [Bacteroides fragilis NCTC 9343]
gi|60492787|emb|CAH07561.1| hypothetical protein BF9343_1780 [Bacteroides fragilis NCTC 9343]
Length = 523
Score = 38.9 bits (89), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 114 LIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSS 173
+ +K +G+ +G W AKGN+ Y SGSNF + + QG ++ LSS
Sbjct: 347 ITVKITGNGITVGGATW----AKGNV-YKSGSNFYFESSQSGYHSGTQGGSFFGWNTLSS 401
Query: 174 LDSTEDIDQSSFSDDNN 190
++T SSFS DN+
Sbjct: 402 TNNT--YGGSSFSSDND 416
>gi|383118036|ref|ZP_09938779.1| hypothetical protein BSHG_3728 [Bacteroides sp. 3_2_5]
gi|251944319|gb|EES84808.1| hypothetical protein BSHG_3728 [Bacteroides sp. 3_2_5]
Length = 523
Score = 38.9 bits (89), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 114 LIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSS 173
+ +K +G+ +G W AKGN+ Y SGSNF + + QG ++ LSS
Sbjct: 347 ITVKITGNGITVGGATW----AKGNV-YKSGSNFYFESSQSGYHSGTQGGSFFGWNTLSS 401
Query: 174 LDSTEDIDQSSFSDDNN 190
++T SSFS DN+
Sbjct: 402 TNNT--YGGSSFSSDND 416
>gi|265763179|ref|ZP_06091747.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|375358128|ref|YP_005110900.1| hypothetical protein BF638R_1832 [Bacteroides fragilis 638R]
gi|263255787|gb|EEZ27133.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|301162809|emb|CBW22356.1| hypothetical protein BF638R_1832 [Bacteroides fragilis 638R]
Length = 523
Score = 38.9 bits (89), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 114 LIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSS 173
+ +K +G+ +G W AKGN+ Y SGSNF + + QG ++ LSS
Sbjct: 347 ITVKITGNGITVGGATW----AKGNV-YKSGSNFYFESSQSGYHSGTQGGSFFGWNTLSS 401
Query: 174 LDSTEDIDQSSFSDDNN 190
++T SSFS DN+
Sbjct: 402 TNNT--YGGSSFSSDND 416
>gi|423257937|ref|ZP_17238860.1| hypothetical protein HMPREF1055_01137 [Bacteroides fragilis
CL07T00C01]
gi|423265095|ref|ZP_17244098.1| hypothetical protein HMPREF1056_01785 [Bacteroides fragilis
CL07T12C05]
gi|387777383|gb|EIK39480.1| hypothetical protein HMPREF1055_01137 [Bacteroides fragilis
CL07T00C01]
gi|392704828|gb|EIY97963.1| hypothetical protein HMPREF1056_01785 [Bacteroides fragilis
CL07T12C05]
Length = 523
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 114 LIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSS 173
+ +K +G+ +G W AKGN+ Y SGSNF + + QG ++ LSS
Sbjct: 347 ITVKITGNGITVGGATW----AKGNV-YKSGSNFYFESSQSGYHSGTQGGSFFGWNTLSS 401
Query: 174 LDSTEDIDQSSFSDDNN 190
++T SSFS DN+
Sbjct: 402 TNNT--YGGSSFSSDND 416
>gi|423249709|ref|ZP_17230725.1| hypothetical protein HMPREF1066_01735 [Bacteroides fragilis
CL03T00C08]
gi|423255210|ref|ZP_17236139.1| hypothetical protein HMPREF1067_02783 [Bacteroides fragilis
CL03T12C07]
gi|392652210|gb|EIY45871.1| hypothetical protein HMPREF1067_02783 [Bacteroides fragilis
CL03T12C07]
gi|392655794|gb|EIY49436.1| hypothetical protein HMPREF1066_01735 [Bacteroides fragilis
CL03T00C08]
Length = 523
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 114 LIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSS 173
+ +K +G+ +G W AKGN+ Y SGSNF + + QG ++ LSS
Sbjct: 347 ITVKITGNGITVGGATW----AKGNV-YKSGSNFYFESSQSGYHSGTQGGSFFGWNTLSS 401
Query: 174 LDSTEDIDQSSFSDDNN 190
++T SSFS DN+
Sbjct: 402 TNNT--YGGSSFSSDND 416
>gi|383859338|ref|XP_003705152.1| PREDICTED: integrator complex subunit 11-like isoform 2 [Megachile
rotundata]
Length = 494
Score = 38.9 bits (89), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 62/138 (44%), Gaps = 16/138 (11%)
Query: 221 DSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 280
+ + GG VLIP+ +G +L + + E +LK+P+Y + E+ Y W
Sbjct: 126 ECIDRGGKVLIPVFALGRAQELCILLETYWERMNLKVPVYFALGLTEKANNYYKMFITW- 184
Query: 281 CKQRQEKLFSGDPL--FAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGP 338
Q+ +K F + F H+K + I +P + +VF+ L G
Sbjct: 185 TNQKIKKTFVQRNMFDFKHIKPFDKAYI------DNPGAM-------VVFATPGMLHAGL 231
Query: 339 TIHLLRRWSGDHNSLLVL 356
++ + ++W+ + +++++
Sbjct: 232 SLQIFKKWAPNEANMVIM 249
>gi|396082284|gb|AFN83894.1| putative beta-lactamase fold-containing exonuclease
[Encephalitozoon romaleae SJ-2008]
Length = 643
Score = 38.5 bits (88), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 28/187 (14%)
Query: 210 EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFME------CSSLKIPIYIIS 263
E+ S + V+ GG L+P+ +G +LL + +E S KIPIY S
Sbjct: 212 EREGRFTSIVQNVVQRGGRCLLPVFALGRAQELL----LILEEHWNSNTSLQKIPIYYAS 267
Query: 264 SVAEELLAYTNTIPEWLCKQRQEKLFSGDPL-FAHVKLIKEKKIHVFPAVHSPKLLMNWQ 322
++A+ + T + ++ Q+ +P F +VK +K + S + +
Sbjct: 268 ALAKRCMGVYQTYIGMMNERIQKLSLVRNPFAFKYVKNLK--------GIDS----FDDE 315
Query: 323 EPCIVFSPHWSLRLGPTIHLLRRWSGD-HNSLLVLENEVDAELAVLPFKPISMKVLQCSF 381
PC++ + L+ G + L RW D N++++ VD LA K I + +
Sbjct: 316 GPCVIMASPGMLQSGLSRDLFERWCSDSKNAVIIPGYCVDGTLA----KEILSEPKEIEA 371
Query: 382 LSGKKLQ 388
L+GKKL+
Sbjct: 372 LNGKKLR 378
>gi|71027091|ref|XP_763189.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350142|gb|EAN30906.1| hypothetical protein TP03_0171 [Theileria parva]
Length = 678
Score = 38.5 bits (88), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 82/213 (38%), Gaps = 36/213 (16%)
Query: 208 EMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAE 267
EME +C+ D++ GG VLIP+ VG +L + + S+ PIY ++E
Sbjct: 311 EME----LCTTVHDTLINGGKVLIPVFAVGRAQELAIILNNYWNNLSISFPIYFGGGLSE 366
Query: 268 ELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIV 327
+ Y W L +E + + + +N P ++
Sbjct: 367 KATNYYKLHSSWTNNNSITNL-------------RENPFSLRNLLQFDQSFLNDNRPMVL 413
Query: 328 FSPHWSLRLGPTIHLLRRWSGDHNSLLVL----------------ENEVDAELAVLPFKP 371
F+ + G ++ + WS + N+L+++ E + + V+ K
Sbjct: 414 FATPGMVHTGLSLKACKLWSQNPNNLILIPGYCVQGTVGNKLIAGEKTIKTNIGVMNIK- 472
Query: 372 ISMKVLQCSFLSGKKLQKVQPLLKILQPKLVLF 404
KV SF + + L+K ++PK ++F
Sbjct: 473 --CKVRYLSFSAHADSPGILQLIKHIRPKNIVF 503
>gi|388579831|gb|EIM20151.1| Metallo-hydrolase/oxidoreductase [Wallemia sebi CBS 633.66]
Length = 626
Score = 38.5 bits (88), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 17/148 (11%)
Query: 223 VKAGGSVLIPINRVGVFLQLLEQIAIFMECSS--LKIPIYIISSVAEELLAYTNTIPEWL 280
++ GG VL+P +G +LL + + + + IPIY S++A + +A +
Sbjct: 253 IRRGGRVLMPSFALGRAQELLLILDEYWQRNPDLHSIPIYYASNLARKCMAVYQAYIRTM 312
Query: 281 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQE--PCIVFSPHWSLRLGP 338
K + SG+ F K I E L WQ+ PC++ + L+ G
Sbjct: 313 NKNINRRFDSGENPF-QFKFISELGD-----------LRKWQDKGPCVMLASPGMLQSGT 360
Query: 339 TIHLLRRWSGD-HNSLLVLENEVDAELA 365
+ LL RW+ D N L++ V+ +A
Sbjct: 361 SRELLERWAPDPKNGLIICGYSVEGTMA 388
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,911,352,068
Number of Sequences: 23463169
Number of extensions: 373829353
Number of successful extensions: 916876
Number of sequences better than 100.0: 633
Number of HSP's better than 100.0 without gapping: 201
Number of HSP's successfully gapped in prelim test: 432
Number of HSP's that attempted gapping in prelim test: 915202
Number of HSP's gapped (non-prelim): 1110
length of query: 575
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 427
effective length of database: 8,886,646,355
effective search space: 3794597993585
effective search space used: 3794597993585
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.4 bits)