BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008170
(575 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449438199|ref|XP_004136877.1| PREDICTED: outer envelope protein 64, mitochondrial-like [Cucumis
sativus]
Length = 606
Score = 828 bits (2140), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/574 (69%), Positives = 468/574 (81%), Gaps = 4/574 (0%)
Query: 1 MSKSFNIIKTNTSNPKVWVVIGVSVVGFVVLAETLRRRRNPKLNGRVDFGAFLERFELIP 60
MS ++KTN SNPK+W++IGV V G V+LAET RR RN K+ DFGAF++RFEL P
Sbjct: 1 MSNPLKLLKTNASNPKLWILIGVGVAGVVILAETRRRGRNGKVLQGEDFGAFIQRFELRP 60
Query: 61 FPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGA 120
FPQP PPAARQ LAGL FA+KDVFDVK YVTGFG+PDWKR H AE+T +VTLLLKNGA
Sbjct: 61 FPQPSPPAARQSLAGLTFAVKDVFDVKDYVTGFGNPDWKRTHDVAEKTDEMVTLLLKNGA 120
Query: 121 TCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTI 180
C+GKTV+DE FGITGENK YGTP+NP++ S +PGGSSSGSAVAVA +LVDFALGTDT+
Sbjct: 121 ACVGKTVMDELGFGITGENKQYGTPINPKLSSFVPGGSSSGSAVAVAGELVDFALGTDTV 180
Query: 181 GCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAV 240
GC+R+PASFCGI +RPSHG + M VL NS SLDTVG AR+ S LHRVGHVLL+LN+V
Sbjct: 181 GCIRIPASFCGIFAFRPSHGVIPMNRVLSNSPSLDTVGWFARDPSTLHRVGHVLLKLNSV 240
Query: 241 EPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKG 300
EPRR RRL+ ADD+FQLSKVP KT+HV+ KAIE+LSGYQ+P+HMN G+Y+ASNVPSLKG
Sbjct: 241 EPRRMRRLVIADDLFQLSKVPLQKTVHVVEKAIENLSGYQSPKHMNFGEYLASNVPSLKG 300
Query: 301 LRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTT 360
QS + + G LKALSSVM+ LQR EFK +EEW+KS KP+LG N E VL AI T+
Sbjct: 301 FHNQSPTLQKGITILKALSSVMILLQRSEFKINHEEWIKSVKPKLGSNASEDVLAAIKTS 360
Query: 361 QDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSI 420
D+IK LYKVR E R AL+ LLKDD ILVIPTV+DPP K +TKK ++EF DRT LSSI
Sbjct: 361 YDDIKTLYKVRMETRIALKSLLKDDGILVIPTVADPPPKFSTKKGIASEFRDRTFALSSI 420
Query: 421 GSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIAS-NLVPL 479
SMSGCC+VA+P+GK ++ PISIS IT+HG DKFLLDTVLD++ +LQEQV +AS NL+P
Sbjct: 421 SSMSGCCEVAVPLGKQDDCPISISLITFHGADKFLLDTVLDIFSALQEQVGVASNNLLPF 480
Query: 480 PDTNGSIDASELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCF 539
DTNG +DASELLKEKGNAAFKG+QWNKAVNYY++AIKLNGT+ATYY NRAAAYLELGCF
Sbjct: 481 ADTNGDMDASELLKEKGNAAFKGRQWNKAVNYYTDAIKLNGTNATYYCNRAAAYLELGCF 540
Query: 540 QQAEEDCSKTISLDKK-VRA--RVGYVDCSMLIY 570
QQAE+DCSK I LDKK V+A R G S+L+Y
Sbjct: 541 QQAEDDCSKAILLDKKTVKAYLRRGTARESLLLY 574
>gi|255569802|ref|XP_002525865.1| amidase, putative [Ricinus communis]
gi|223534870|gb|EEF36559.1| amidase, putative [Ricinus communis]
Length = 607
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/575 (70%), Positives = 486/575 (84%), Gaps = 5/575 (0%)
Query: 1 MSKSFNIIKTNTSNPKVWVVIGVSVVGFVVLAETLRRRRNPKLN--GRVDFGAFLERFEL 58
M+K +IK + SNPKVW+VIGV+V G +V+AET RR R L R DFGAF+E+FE+
Sbjct: 1 MNKPLTLIKQHASNPKVWLVIGVTVAGIIVVAETRRRSRKAALMMIKREDFGAFIEKFEI 60
Query: 59 IPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKN 118
+PFPQ PPPAA+QPL+GL FAIKD+FDVK YVTGFG+PDW+R H AE+ AV VT LLKN
Sbjct: 61 LPFPQAPPPAAKQPLSGLSFAIKDIFDVKDYVTGFGNPDWRRTHEVAEKMAVAVTALLKN 120
Query: 119 GATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTD 178
GATC+GKT++DE GI+GEN HYGTP+NP MPS +PGGSSSGSAV VAA+LVDFALGTD
Sbjct: 121 GATCVGKTIMDELGLGISGENLHYGTPMNPIMPSFVPGGSSSGSAVTVAAELVDFALGTD 180
Query: 179 TIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLN 238
TIGC+R+PA+FCGI GYRPSHGTVSMIG +PN+QSLDTVG LAR+ SIL VGH LL+LN
Sbjct: 181 TIGCIRIPAAFCGIFGYRPSHGTVSMIGAIPNAQSLDTVGWLARDPSILRCVGHALLKLN 240
Query: 239 AVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSL 298
AVE R+ARR+IFADD+FQL KVPK KT +VISKAIE+LSGYQ+P+H+N GQYIASNVPSL
Sbjct: 241 AVEARKARRIIFADDLFQLCKVPKQKTEYVISKAIENLSGYQSPKHLNFGQYIASNVPSL 300
Query: 299 KGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAIN 358
KG QS + ++GT+ LKALSSVM+SLQRYEFKT +EEWVKS KP+L +V RVL AIN
Sbjct: 301 KGFLEQSGNLQSGTSALKALSSVMVSLQRYEFKTNHEEWVKSVKPKLAPDVSNRVLAAIN 360
Query: 359 TTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLS 418
T +N+K+LYK+R+EMRAA Q LLKDD ILVIPTV+DPPLKLNTKK YS E HDR ++LS
Sbjct: 361 ATYENVKVLYKIRSEMRAATQSLLKDDGILVIPTVADPPLKLNTKKGYSPESHDRVIILS 420
Query: 419 SIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNLVP 478
SI SMSGCCQVA+P+GK+++ PIS+SFI++HG DKFLLDT++D+Y SLQ Q++I SN
Sbjct: 421 SIASMSGCCQVAVPLGKHDDCPISVSFISFHGADKFLLDTIVDMYLSLQAQISIVSNSPL 480
Query: 479 LPDTNGSIDASELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGC 538
LPDTNG++DASELLKEKGNAAFKG +WNKAV+YY+EAIKLNG++AT+Y NRAAAYLELGC
Sbjct: 481 LPDTNGNMDASELLKEKGNAAFKGGKWNKAVDYYTEAIKLNGSNATFYCNRAAAYLELGC 540
Query: 539 FQQAEEDCSKTISLDKK-VRA--RVGYVDCSMLIY 570
FQQAEEDCS ISLDKK V+A R G S+L Y
Sbjct: 541 FQQAEEDCSMAISLDKKNVKAYLRRGTAKESLLYY 575
>gi|225448253|ref|XP_002268888.1| PREDICTED: outer envelope protein 64, mitochondrial [Vitis
vinifera]
gi|296086830|emb|CBI32979.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/575 (71%), Positives = 470/575 (81%), Gaps = 5/575 (0%)
Query: 1 MSKSFNIIKT--NTSNPKVWVVIGVSVVGFVVLAETLRRRRNPKLNGRVDFGAFLERFEL 58
MSK+ + +K + SNPK W+VI V G V+L ET RR+R L R GAF+ERFEL
Sbjct: 1 MSKALHQLKKHIDVSNPKAWIVIAAGVAGIVILVETRRRKRRAALLTREGLGAFVERFEL 60
Query: 59 IPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKN 118
+PFPQPPPPA+R L+G KFA+ D+FDVKGYVTGFGS WKR H EA +TAV VT LLKN
Sbjct: 61 LPFPQPPPPASRLLLSGFKFAVTDIFDVKGYVTGFGSTSWKRTHEEATKTAVAVTALLKN 120
Query: 119 GATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTD 178
GATC+GKTVLDE +FGITGEN +G+P NP +PSHIPGGSSSGSAVAVA+QLVDFA+GTD
Sbjct: 121 GATCVGKTVLDELSFGITGENMDFGSPANPVLPSHIPGGSSSGSAVAVASQLVDFAIGTD 180
Query: 179 TIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLN 238
TIG VRVPASFCGILGYRPSHG VS IGVLP+SQSLDTVG AR+ SILHRVGH+LLQ+N
Sbjct: 181 TIGGVRVPASFCGILGYRPSHGAVSTIGVLPSSQSLDTVGWFARDPSILHRVGHILLQIN 240
Query: 239 AVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSL 298
VEPRR R L+ ADD+FQLSKVPK KT+HV++K E+LSGYQ P+H+N GQYIASNVPSL
Sbjct: 241 PVEPRRVRNLMIADDLFQLSKVPKQKTVHVVNKVAENLSGYQPPKHVNFGQYIASNVPSL 300
Query: 299 KGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAIN 358
KG QS + +NG + LKALSSVM+SLQR EFKT +EEWVKS KPRLG V +RVL AIN
Sbjct: 301 KGFHEQSINVKNGISALKALSSVMISLQRCEFKTNHEEWVKSVKPRLGPEVSDRVLAAIN 360
Query: 359 TTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLS 418
TT +NIKI YKVR EMRAAL LLKDD ILVIPTV+DPPLKLN+KK +EFHDR L
Sbjct: 361 TTHENIKIFYKVRTEMRAALHSLLKDDGILVIPTVADPPLKLNSKKAVFSEFHDRAFTLL 420
Query: 419 SIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNLVP 478
SI SMSGCCQV +P+GK+ + PIS+SFI +HG DKFLLDTVLD+Y SLQEQ +I SN +P
Sbjct: 421 SIASMSGCCQVTVPLGKHEDFPISVSFIAFHGADKFLLDTVLDMYPSLQEQASITSNSLP 480
Query: 479 LPDTNGSIDASELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGC 538
LPDTNG +DASELLKEKGNAAFKG+QWNKAVNYY+EAIKLN T+ATYY NRAAAYLELGC
Sbjct: 481 LPDTNGDMDASELLKEKGNAAFKGRQWNKAVNYYTEAIKLNETNATYYCNRAAAYLELGC 540
Query: 539 FQQAEEDCSKTISLDKK-VRA--RVGYVDCSMLIY 570
FQQA EDCSK I LDKK V+A R G S+L Y
Sbjct: 541 FQQAVEDCSKAILLDKKNVKAYLRRGTARESLLCY 575
>gi|224054324|ref|XP_002298203.1| amidase family protein [Populus trichocarpa]
gi|222845461|gb|EEE83008.1| amidase family protein [Populus trichocarpa]
Length = 599
Score = 786 bits (2031), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/571 (69%), Positives = 467/571 (81%), Gaps = 9/571 (1%)
Query: 5 FNIIKTNTSNPKVWV-VIGVSV-VGFVVLAETLRRRRNPKLNGRVDFGAFLERFELIPFP 62
N +K N NPKVWV VIGV+V VG V AET RRR K + DFGAF++RF+++PFP
Sbjct: 1 MNTVKANIKNPKVWVLVIGVTVAVGMVAAAET--RRRKAKF--KEDFGAFVQRFQILPFP 56
Query: 63 QPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATC 122
QPPPPAA+Q LAGL FAI D+F+++ YVTGFG+PDW R H AE+TAV VT LLKNGA C
Sbjct: 57 QPPPPAAKQTLAGLTFAINDIFELEDYVTGFGNPDWARTHEAAEKTAVTVTALLKNGAVC 116
Query: 123 IGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGC 182
+GKTV+ E FG++GEN HYGTP+NP+MP+H+PGGSSSGSAVAVAA LVDFALGTDTIGC
Sbjct: 117 VGKTVMGELGFGVSGENIHYGTPINPEMPAHVPGGSSSGSAVAVAAGLVDFALGTDTIGC 176
Query: 183 VRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
+R+PA+FCG+L YRPSHG VS IG+LPNSQSLDTVG LAR+ SIL RVGH LL+LN VEP
Sbjct: 177 IRIPAAFCGLLSYRPSHGAVSTIGILPNSQSLDTVGWLARDPSILLRVGHTLLKLNTVEP 236
Query: 243 RRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLR 302
RRARRLIFADD+FQLSKVPK K VI+KAIE+LSGYQ +H+N GQ+I+ NVPSLKG
Sbjct: 237 RRARRLIFADDLFQLSKVPKQKAEVVINKAIENLSGYQPQQHINFGQHISLNVPSLKGFL 296
Query: 303 AQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQD 362
QST+ +NG + LKALSS M+SLQR+EFKT +E+WVKS +P+L +V + +L AINTT +
Sbjct: 297 DQSTNMQNGISNLKALSSAMVSLQRHEFKTNHEDWVKSVEPKLALDVSDNLLTAINTTHE 356
Query: 363 NIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGS 422
NIK L +R E+RA +Q LLKDD ILVIPTV+DPP KLN+KK + E H+R L+LSSI S
Sbjct: 357 NIKALCDIRKELRACMQILLKDDGILVIPTVADPPSKLNSKKRDTVESHNRALILSSIAS 416
Query: 423 MSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNLVPLPDT 482
MSGCCQV IP+GK + PIS+SFIT+HGGDKFLLDTVLD+Y SL+EQ+N SN PL D
Sbjct: 417 MSGCCQVTIPLGKNDGCPISVSFITFHGGDKFLLDTVLDMYSSLKEQINFLSNPAPLKDA 476
Query: 483 NGSIDASELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQQA 542
N + DASELLKEKGNAA+KGKQWNKAVNYYSEAIKLNG +ATYYSNRAAAYL+LGCFQ+A
Sbjct: 477 NENFDASELLKEKGNAAYKGKQWNKAVNYYSEAIKLNGKNATYYSNRAAAYLQLGCFQKA 536
Query: 543 EEDCSKTISLDKK-VRA--RVGYVDCSMLIY 570
EEDC+ ISLDKK V+A R G S+L Y
Sbjct: 537 EEDCNMAISLDKKNVKAYLRRGTARESLLFY 567
>gi|356512046|ref|XP_003524732.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like
[Glycine max]
Length = 603
Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/573 (67%), Positives = 461/573 (80%), Gaps = 5/573 (0%)
Query: 1 MSKSFNIIKTNTSNPKVWVVIGVSVVGFVVLAETLRRRRNPKLNGRVDFGAFLERFELIP 60
MS+S +IK + SNPK+W+VIG+ V G VVL ET RR R K + + DFGAF+ERFEL+P
Sbjct: 1 MSQSLKLIKEHASNPKLWLVIGIGVAGIVVLVETRRRTRRGKTH-KQDFGAFVERFELLP 59
Query: 61 FPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGA 120
FPQPPPPAA+Q L+ L FAI D FDVK YVTGFG+ WK H AE+TAVVVT LL +GA
Sbjct: 60 FPQPPPPAAKQSLSALTFAINDTFDVKDYVTGFGNSTWKSTHKAAEKTAVVVTALLMSGA 119
Query: 121 TCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTI 180
TC+GKTV+DEF+FGI+GENK+YGTP +PQMPS GGSS GSAVAVAA LVDFA+GTDT
Sbjct: 120 TCVGKTVVDEFSFGISGENKYYGTPTHPQMPSCKLGGSSCGSAVAVAAGLVDFAVGTDTT 179
Query: 181 GCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAV 240
GCVR+PASFCGI G+RPSHG VS IGVLPN+QSLDT+G AR+ SILHRVGHVLLQLN+V
Sbjct: 180 GCVRIPASFCGIFGFRPSHGAVSTIGVLPNAQSLDTIGWFARDPSILHRVGHVLLQLNSV 239
Query: 241 EPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKG 300
E +R+R IFADD+FQLSK+P TI+VI KAIE++SGYQ P+H+N+ QYI S VPSL+
Sbjct: 240 ETKRSRHFIFADDLFQLSKIPTQNTIYVIGKAIENMSGYQAPKHLNLCQYIDSRVPSLR- 298
Query: 301 LRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTT 360
L QST +N T+ LK LSSVMLSLQ YEFKT +EEWVKS K +LG V + V+ AINTT
Sbjct: 299 LHQQSTHQQNETSILKTLSSVMLSLQGYEFKTNHEEWVKSLKYKLGCGVSDHVIAAINTT 358
Query: 361 QDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSI 420
DNIK LYKVR EMR A Q LLKDD ILVIPTV+ LKLNTKK +S+EFHDRT LSSI
Sbjct: 359 YDNIKALYKVRTEMRGAFQSLLKDDGILVIPTVAGSQLKLNTKKGFSSEFHDRTFALSSI 418
Query: 421 GSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNLVPLP 480
S+SGCCQV IP+G +++ +S+SFI++HG DKFLLDT+LD+Y +LQEQV++ S +PLP
Sbjct: 419 ASVSGCCQVTIPLGYHDDCSLSVSFISFHGADKFLLDTILDIYSTLQEQVSVGSYSLPLP 478
Query: 481 DTNGSIDASELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQ 540
+ NG+ + SELLKEKGNAAFK +QW+KA++YYSEAIKLNGT+ TYY NRAAA+L+LGCFQ
Sbjct: 479 NINGNRETSELLKEKGNAAFKERQWSKALSYYSEAIKLNGTNTTYYCNRAAAHLKLGCFQ 538
Query: 541 QAEEDCSKTISLDKK-VRA--RVGYVDCSMLIY 570
QA EDC K I LDKK V+A R G S+L Y
Sbjct: 539 QAAEDCGKAILLDKKNVKAYLRRGTARESLLCY 571
>gi|297806973|ref|XP_002871370.1| hypothetical protein ARALYDRAFT_325494 [Arabidopsis lyrata subsp.
lyrata]
gi|297317207|gb|EFH47629.1| hypothetical protein ARALYDRAFT_325494 [Arabidopsis lyrata subsp.
lyrata]
Length = 621
Score = 754 bits (1946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/556 (64%), Positives = 451/556 (81%), Gaps = 3/556 (0%)
Query: 1 MSKSFNIIKTNTSNPKVWVVIGVSVVGFVVLAETLRRRRNPKLNGRVDFGAFLERFELIP 60
MS + +I++N SNPKVWVVIGV+V G V+LAET R+R K DFGAFL+RFEL+P
Sbjct: 1 MSNTLTLIQSNASNPKVWVVIGVTVAGIVILAET--RKRRIKALREEDFGAFLDRFELLP 58
Query: 61 FPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGA 120
FP PPPPAA+Q L+ L F+I D FDVK Y+TGFGSP WK+ H AE+TAVVVT LLKNGA
Sbjct: 59 FPPPPPPAAKQSLSALTFSISDAFDVKDYITGFGSPQWKKTHEAAEKTAVVVTTLLKNGA 118
Query: 121 TCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTI 180
TC+GKT++DE FGI GENKHYGTP+NP MPS++PGG SSGSAV+V A+LVDF+LG DT
Sbjct: 119 TCVGKTIMDELGFGIIGENKHYGTPINPLMPSNVPGGCSSGSAVSVGAELVDFSLGIDTT 178
Query: 181 GCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAV 240
G VR+PA+FCGILG+RPS GTVS +GVLPNSQSL+TVG A + S+L +VGH LL L+AV
Sbjct: 179 GGVRIPAAFCGILGFRPSQGTVSSVGVLPNSQSLETVGWFASDPSVLCQVGHALLNLSAV 238
Query: 241 EPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKG 300
RR R LIFADD+F+LS +PK K++HV+ KAIE+LSGYQ P+H+NVGQY+ASNVPSL
Sbjct: 239 AHRRQRSLIFADDLFELSDIPKQKSVHVVRKAIENLSGYQTPKHVNVGQYVASNVPSLAE 298
Query: 301 LRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTT 360
QS +N +TLKALSSVML++QR+EFKT +EEW ++ K LG V+ A+ +
Sbjct: 299 FCEQSGKSQNSASTLKALSSVMLAIQRHEFKTNHEEWSQTCKSFLGPRFSNDVVTALKSR 358
Query: 361 QDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYS-AEFHDRTLVLSS 419
++IK LY+V+ EMRA +Q LLK+D ILVIPTV+DPP KLNTK S EF DRT LSS
Sbjct: 359 NESIKSLYRVKTEMRATIQSLLKEDGILVIPTVADPPPKLNTKNKNSLNEFLDRTYALSS 418
Query: 420 IGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNLVPL 479
I SMSGCCQV IP+G++ + PIS+SF+TY+GGDKFLLDT+LD+Y SLQ+Q +ASNL P+
Sbjct: 419 IASMSGCCQVTIPLGQHGDRPISVSFLTYYGGDKFLLDTILDVYASLQDQAKLASNLAPV 478
Query: 480 PDTNGSIDASELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCF 539
DTNG+++ASE++KEKGNAA+KG+QWNKAVN+Y+EAIKLNG +ATY+ NRAAA+LELGCF
Sbjct: 479 SDTNGNMEASEVMKEKGNAAYKGRQWNKAVNFYTEAIKLNGANATYFCNRAAAFLELGCF 538
Query: 540 QQAEEDCSKTISLDKK 555
QQAE+DC++ + +DKK
Sbjct: 539 QQAEQDCTEAMLIDKK 554
>gi|356525874|ref|XP_003531546.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like
[Glycine max]
Length = 598
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/555 (68%), Positives = 447/555 (80%), Gaps = 7/555 (1%)
Query: 1 MSKSFNIIKTNTSNPKVWVVIGVSVVGFVVLAETLRRRRNPKLNGRVDFGAFLERFELIP 60
MSK K N SNPK+W++IG+ + G VV+ RRRR+ L + DFGAF+ER EL+P
Sbjct: 1 MSKMLK--KVNASNPKLWLLIGIGLAGAVVVVAETRRRRHRNLP-KEDFGAFVERIELLP 57
Query: 61 FPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGA 120
PQP Q L+ L FAIKD+FDVKGYVTGFG+P WK+ H EA +TA+V+T LL +GA
Sbjct: 58 IPQP---NQTQTLSALTFAIKDIFDVKGYVTGFGNPQWKKTHGEAGKTAIVITALLSDGA 114
Query: 121 TCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTI 180
TC+GKTV+DEF+FGI+GENK YGTP NPQMPS IPGGSSSGSAVAVAA+LVDFA+GTDT
Sbjct: 115 TCVGKTVMDEFSFGISGENKFYGTPTNPQMPSSIPGGSSSGSAVAVAARLVDFAIGTDTT 174
Query: 181 GCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAV 240
GCVR+PA+FCGILG+RPSHG +S IGVLPN+QSLDTVG AR+ S+LHRVG VLL L +V
Sbjct: 175 GCVRIPAAFCGILGFRPSHGVISTIGVLPNAQSLDTVGWFARDPSVLHRVGLVLLPLTSV 234
Query: 241 EPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKG 300
E +R RR+IFADD+FQLSK P KT ++I KAIE+LSGYQ+ +HMN+ QYIASNVPSLKG
Sbjct: 235 ELKRTRRIIFADDLFQLSKAPSQKTAYIIGKAIENLSGYQSLQHMNLCQYIASNVPSLKG 294
Query: 301 LRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTT 360
+ T +NG + LKAL+SVM SLQ YEFKT +EEWVKS KPRLG V ERV A+N T
Sbjct: 295 FHEKLTQQQNGLSILKALTSVMFSLQGYEFKTNHEEWVKSVKPRLGRGVSERVNAAMNAT 354
Query: 361 QDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSI 420
DNIK LYKVR EMR A Q LLKDD ILVIPTV+D PLKLNT+K +S+EFHDR LSSI
Sbjct: 355 HDNIKTLYKVRTEMRGAFQHLLKDDGILVIPTVADYPLKLNTEKGFSSEFHDRAFALSSI 414
Query: 421 GSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNLVPLP 480
S+SGCCQVAIP+G +N+ SIS I+ HG DKFLL+TVLD+Y +LQEQV++A L PL
Sbjct: 415 ASISGCCQVAIPLGCHNDCCASISLISAHGVDKFLLNTVLDMYSTLQEQVSVAYAL-PLL 473
Query: 481 DTNGSIDASELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQ 540
DTNGS++ SELLKEKGN AFKG+ WNKAV+YY+EAI LNGT+ATYYSNRAAAYLELGCFQ
Sbjct: 474 DTNGSMETSELLKEKGNTAFKGRLWNKAVDYYTEAINLNGTNATYYSNRAAAYLELGCFQ 533
Query: 541 QAEEDCSKTISLDKK 555
+AEEDC+ I DKK
Sbjct: 534 EAEEDCNMAILHDKK 548
>gi|30682691|ref|NP_196504.2| translocon at the outer membrane of chloroplasts 64-V [Arabidopsis
thaliana]
gi|357580466|sp|F4KCL7.1|OE64M_ARATH RecName: Full=Outer envelope protein 64, mitochondrial; AltName:
Full=Mitochondrial outer membrane protein 64;
Short=mtOM64; AltName: Full=Translocon at the outer
membrane of chloroplasts 64-V; Short=AtTOC64-V
gi|332004008|gb|AED91391.1| translocon at the outer membrane of chloroplasts 64-V [Arabidopsis
thaliana]
Length = 603
Score = 744 bits (1921), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/556 (64%), Positives = 449/556 (80%), Gaps = 3/556 (0%)
Query: 1 MSKSFNIIKTNTSNPKVWVVIGVSVVGFVVLAETLRRRRNPKLNGRVDFGAFLERFELIP 60
MS + ++I++N SNPKVWVVIGV+V G V+LAET R+RR L DFGAFL+RFEL+P
Sbjct: 1 MSNTLSLIQSNASNPKVWVVIGVTVAGIVILAET-RKRRIRALREE-DFGAFLDRFELLP 58
Query: 61 FPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGA 120
FP PPPPAA+Q L+GL F+I D FDVK Y+TGFG P WK+ H AE+TAVVVT LLKNGA
Sbjct: 59 FPPPPPPAAKQSLSGLTFSISDAFDVKDYITGFGCPQWKKTHEAAEKTAVVVTTLLKNGA 118
Query: 121 TCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTI 180
TC+GKT++DE FGI GENKHYGTP+NP MP ++PGG SSGSAV+V A+LVDF+LG DT
Sbjct: 119 TCVGKTIMDELGFGIIGENKHYGTPINPLMPDNVPGGCSSGSAVSVGAELVDFSLGIDTT 178
Query: 181 GCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAV 240
G VRVPA+FCGILG+RPS GTVS +GVLPNSQSL+TVG A + S+L +VGH LL L+AV
Sbjct: 179 GGVRVPAAFCGILGFRPSQGTVSSVGVLPNSQSLETVGWFASDPSVLCQVGHALLNLSAV 238
Query: 241 EPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKG 300
RR R LIFADD+F+LS +PK K++ V+ KAIE+LSGY+ P+H+NVGQY+ASNVPSL
Sbjct: 239 THRRQRSLIFADDLFELSDIPKQKSVQVVRKAIENLSGYKTPKHVNVGQYVASNVPSLAE 298
Query: 301 LRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTT 360
QS +N +TL+ALSSVML++QR+EFKT +EEW ++ K LG V+ A+ +
Sbjct: 299 FCEQSGKSQNSASTLRALSSVMLAIQRHEFKTNHEEWWQTCKSFLGPRFSNDVVTALKSK 358
Query: 361 QDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYS-AEFHDRTLVLSS 419
++IK LY+V+NEMRA +Q LLK+D ILVIPTV+DPP +LNTK+ S EF DRT LS
Sbjct: 359 NESIKSLYRVKNEMRATIQSLLKEDGILVIPTVADPPPRLNTKRNKSLNEFLDRTYALSC 418
Query: 420 IGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNLVPL 479
I SMSGCCQV IP+G++ + PIS+S +TY+GGDKFLLDT LD+Y SLQ+Q +ASNL P+
Sbjct: 419 IASMSGCCQVTIPLGEHGDRPISVSLLTYYGGDKFLLDTTLDVYASLQDQAKLASNLAPV 478
Query: 480 PDTNGSIDASELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCF 539
DTNG+++ASE++KEKGNAA+KGKQWNKAVN+Y+EAIKLNG +ATYY NRAAA+LEL CF
Sbjct: 479 SDTNGNMEASEVMKEKGNAAYKGKQWNKAVNFYTEAIKLNGANATYYCNRAAAFLELCCF 538
Query: 540 QQAEEDCSKTISLDKK 555
QQAE+DC+K + +DKK
Sbjct: 539 QQAEQDCTKAMLIDKK 554
>gi|9955529|emb|CAC05468.1| putative subunit of TOC complex [Arabidopsis thaliana]
Length = 616
Score = 743 bits (1919), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/556 (64%), Positives = 449/556 (80%), Gaps = 3/556 (0%)
Query: 1 MSKSFNIIKTNTSNPKVWVVIGVSVVGFVVLAETLRRRRNPKLNGRVDFGAFLERFELIP 60
MS + ++I++N SNPKVWVVIGV+V G V+LAET R+RR L DFGAFL+RFEL+P
Sbjct: 1 MSNTLSLIQSNASNPKVWVVIGVTVAGIVILAET-RKRRIRALREE-DFGAFLDRFELLP 58
Query: 61 FPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGA 120
FP PPPPAA+Q L+GL F+I D FDVK Y+TGFG P WK+ H AE+TAVVVT LLKNGA
Sbjct: 59 FPPPPPPAAKQSLSGLTFSISDAFDVKDYITGFGCPQWKKTHEAAEKTAVVVTTLLKNGA 118
Query: 121 TCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTI 180
TC+GKT++DE FGI GENKHYGTP+NP MP ++PGG SSGSAV+V A+LVDF+LG DT
Sbjct: 119 TCVGKTIMDELGFGIIGENKHYGTPINPLMPDNVPGGCSSGSAVSVGAELVDFSLGIDTT 178
Query: 181 GCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAV 240
G VRVPA+FCGILG+RPS GTVS +GVLPNSQSL+TVG A + S+L +VGH LL L+AV
Sbjct: 179 GGVRVPAAFCGILGFRPSQGTVSSVGVLPNSQSLETVGWFASDPSVLCQVGHALLNLSAV 238
Query: 241 EPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKG 300
RR R LIFADD+F+LS +PK K++ V+ KAIE+LSGY+ P+H+NVGQY+ASNVPSL
Sbjct: 239 THRRQRSLIFADDLFELSDIPKQKSVQVVRKAIENLSGYKTPKHVNVGQYVASNVPSLAE 298
Query: 301 LRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTT 360
QS +N +TL+ALSSVML++QR+EFKT +EEW ++ K LG V+ A+ +
Sbjct: 299 FCEQSGKSQNSASTLRALSSVMLAIQRHEFKTNHEEWWQTCKSFLGPRFSNDVVTALKSK 358
Query: 361 QDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSA-EFHDRTLVLSS 419
++IK LY+V+NEMRA +Q LLK+D ILVIPTV+DPP +LNTK+ S EF DRT LS
Sbjct: 359 NESIKSLYRVKNEMRATIQSLLKEDGILVIPTVADPPPRLNTKRNKSLNEFLDRTYALSC 418
Query: 420 IGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNLVPL 479
I SMSGCCQV IP+G++ + PIS+S +TY+GGDKFLLDT LD+Y SLQ+Q +ASNL P+
Sbjct: 419 IASMSGCCQVTIPLGEHGDRPISVSLLTYYGGDKFLLDTTLDVYASLQDQAKLASNLAPV 478
Query: 480 PDTNGSIDASELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCF 539
DTNG+++ASE++KEKGNAA+KGKQWNKAVN+Y+EAIKLNG +ATYY NRAAA+LEL CF
Sbjct: 479 SDTNGNMEASEVMKEKGNAAYKGKQWNKAVNFYTEAIKLNGANATYYCNRAAAFLELCCF 538
Query: 540 QQAEEDCSKTISLDKK 555
QQAE+DC+K + +DKK
Sbjct: 539 QQAEQDCTKAMLIDKK 554
>gi|356557561|ref|XP_003547084.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like
[Glycine max]
Length = 665
Score = 739 bits (1908), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/553 (68%), Positives = 450/553 (81%), Gaps = 5/553 (0%)
Query: 3 KSFNIIKTNTSNPKVWVVIGVSVVGFVVLAETLRRRRNPKLNGRVDFGAFLERFELIPFP 62
KS +IK N SNPK+W++IG+ +VG VV+ RRRR KL + DFGAF+ERFEL+P P
Sbjct: 68 KSLTLIKVNPSNPKLWLLIGIGLVGAVVVVAETRRRRRRKL-PKPDFGAFVERFELLPIP 126
Query: 63 QPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATC 122
QP Q L+ L FAIKD+FDVKGYVTGFG+P WK+ H+EA +TA+V+T LL NGATC
Sbjct: 127 QP---NQTQTLSALTFAIKDIFDVKGYVTGFGNPQWKKMHNEAGKTAIVITALLSNGATC 183
Query: 123 IGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGC 182
+GKTV+DEF+FGI+GENK YGTP NPQMPS IPGGSSSGSAVAVAA+LVDFA+GTDT GC
Sbjct: 184 VGKTVMDEFSFGISGENKFYGTPTNPQMPSSIPGGSSSGSAVAVAARLVDFAMGTDTTGC 243
Query: 183 VRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
VR+PA+FCGILG+RPSHG +S IGVLPN+QSLDTVG AR+ S+LHRVG VLL LN+VE
Sbjct: 244 VRIPAAFCGILGFRPSHGVISTIGVLPNAQSLDTVGWFARDPSVLHRVGLVLLPLNSVEL 303
Query: 243 RRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLR 302
+R RR+IFADD+FQL K P KT+++I KAIE+LSGYQ P+HMN+ QYIASNVPSLK R
Sbjct: 304 KRTRRIIFADDLFQLCKAPSQKTVYIIGKAIENLSGYQFPQHMNLCQYIASNVPSLKEFR 363
Query: 303 AQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQD 362
+ T +NG + LKAL+SVM LQ YEFKT +EEWVKS KPRLG + ERV A+N T D
Sbjct: 364 EKFTHQQNGVSILKALTSVMFYLQGYEFKTNHEEWVKSVKPRLGRGMSERVNAAMNATHD 423
Query: 363 NIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGS 422
NIK LYKVR EM A Q LLKDD ILVIPTV+D PLKLNT+K +S+EF DR LSSI S
Sbjct: 424 NIKTLYKVRTEMWGAFQHLLKDDGILVIPTVADYPLKLNTEKGFSSEFGDRAFALSSIAS 483
Query: 423 MSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNLVPLPDT 482
+SGCCQVAIP+G +N+ S+S I+ HG DKFLL+TVLD+Y +LQEQV++A L PLPDT
Sbjct: 484 ISGCCQVAIPLGCHNDCCASVSLISAHGADKFLLNTVLDMYSTLQEQVSVAYAL-PLPDT 542
Query: 483 NGSIDASELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQQA 542
NGS+ SELLKEKGNAAFKG+ WNKAV+YY+EAI LNGT+ATYYSNRAAAYLELGCFQ+A
Sbjct: 543 NGSMGTSELLKEKGNAAFKGRLWNKAVDYYTEAINLNGTNATYYSNRAAAYLELGCFQEA 602
Query: 543 EEDCSKTISLDKK 555
EEDC+ I DKK
Sbjct: 603 EEDCNMAILHDKK 615
>gi|357138060|ref|XP_003570616.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like
[Brachypodium distachyon]
Length = 609
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/548 (59%), Positives = 408/548 (74%), Gaps = 5/548 (0%)
Query: 12 TSNPKVWVVIGVSVVGFVVLAETLRRRRNPKLNGRV----DFGAFLERFELIPFPQPPPP 67
T NP+ W+V G++V G +V+AE RRRR L G+ D GAF ER EL P PQPPPP
Sbjct: 13 TGNPRAWIVAGIAVAGVIVVAEAARRRRR-WLRGKCTVPADSGAFCERLELAPPPQPPPP 71
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AARQ L+GL FA D F+++GYV GFG+PDWKR H A RTAV VT+LLK GATC+G+TV
Sbjct: 72 AARQLLSGLTFAASDNFEIEGYVAGFGNPDWKRTHKAASRTAVAVTMLLKQGATCVGRTV 131
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
+DE FG+TGEN H GTP+NP P+ +PGGS SGSAVAV+AQLVDFALGTDT G +R+PA
Sbjct: 132 MDELGFGVTGENLHCGTPINPVSPTVVPGGSCSGSAVAVSAQLVDFALGTDTTGDLRIPA 191
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
SFCG+L +RPSHG VS +G + NSQSLDT+G AR+ +LHRVG VLL + + ++
Sbjct: 192 SFCGLLCFRPSHGVVSTLGTIANSQSLDTIGWFARDPRVLHRVGDVLLPAASGGLKEKKQ 251
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
L+FADD F+L KVPK KT+H+I A+ +L GYQ P+H+N+GQYI+SNVPSLK +T
Sbjct: 252 LVFADDCFELLKVPKQKTMHIIENAVHTLPGYQPPKHINIGQYISSNVPSLKEFCQHATK 311
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
+ G + LKAL +VML LQRYEFK +E+WV + KP+LG ++ RVL+A+N T DNIK L
Sbjct: 312 LQGGISALKALCAVMLLLQRYEFKANHEDWVNTVKPKLGLDISTRVLQAVNFTDDNIKSL 371
Query: 368 YKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCC 427
Y VRNE RAAL+ LLKD ILV+PT++ PLK N++K S EF DR I ++SGCC
Sbjct: 372 YIVRNEWRAALKNLLKDTGILVLPTMAGYPLKRNSRKRLSPEFEDRMYAFVCIAALSGCC 431
Query: 428 QVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNLVPLPDTNGSID 487
Q +P+G +++HPIS+SF+ HG DKFLL +LD+Y ++QEQ+ AS L P N I
Sbjct: 432 QATVPLGNHSDHPISLSFVAPHGSDKFLLRAILDMYSTIQEQLVFASKLALRPVINNDIG 491
Query: 488 ASELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQQAEEDCS 547
ASELLKEKGN +FK K+W+KA+ +YSEAIKLN T+A YYSNRAAAYLELG F+QAE DC
Sbjct: 492 ASELLKEKGNNSFKIKEWSKAIEFYSEAIKLNDTNAAYYSNRAAAYLELGRFKQAEADCD 551
Query: 548 KTISLDKK 555
K + LDKK
Sbjct: 552 KALLLDKK 559
>gi|326497425|dbj|BAK05802.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 609
Score = 634 bits (1634), Expect = e-179, Method: Compositional matrix adjust.
Identities = 324/560 (57%), Positives = 407/560 (72%), Gaps = 6/560 (1%)
Query: 1 MSKSFNIIKTNTSNPKVWVVIGVSVVGFVVLAETLRRRRNPKLNGRVD----FGAFLERF 56
M S T +SNP+ W+V GV+V G +VLAE RR R L G+ GAF +R
Sbjct: 1 MDSSARSGATGSSNPRAWIVAGVAVAGVIVLAEVARRPRR-WLRGKSSPPPYSGAFCDRL 59
Query: 57 ELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLL 116
EL P PQPPPPAARQ L L FA+ D FD++G+V GFG+PDWKR H A TAV V +LL
Sbjct: 60 ELAPPPQPPPPAARQQLLDLAFAVSDNFDIEGHVAGFGNPDWKRTHKAASHTAVAVKVLL 119
Query: 117 KNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALG 176
K GATC+G+TV+DE FG+TGEN H GTP+NP PS +PGGS SG+AVAV+AQLV+FALG
Sbjct: 120 KQGATCVGRTVMDELGFGVTGENLHCGTPINPASPSVLPGGSCSGAAVAVSAQLVEFALG 179
Query: 177 TDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ 236
TDT G +R+PASFCG+LG+R SHG VS +G LPNS SLDT+G LAR+ IL RVG LL
Sbjct: 180 TDTTGDLRIPASFCGVLGFRSSHGVVSTLGTLPNSHSLDTIGWLARDPHILSRVGDALLP 239
Query: 237 LNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESL-SGYQNPEHMNVGQYIASNV 295
+ A + R+L+FADD F+L K+P KT+ VI A+ +L GYQ P+H+N+GQYI+SNV
Sbjct: 240 VAACGLKGKRQLVFADDCFELLKIPNQKTVDVIENAVHTLPGGYQPPKHINIGQYISSNV 299
Query: 296 PSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLE 355
PSLK ST + G + LKAL +VML LQRYEFK+ +E+WV + KP+LG V RVL+
Sbjct: 300 PSLKEFCEPSTKLQEGKSALKALCTVMLLLQRYEFKSNHEDWVNTVKPKLGLEVSTRVLQ 359
Query: 356 AINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTL 415
A+N T DNIK LY VR E RAAL+ LLKD ILV+PT++ PLK N+K+ S+EF D+
Sbjct: 360 AVNFTDDNIKSLYIVRTEWRAALKNLLKDTGILVLPTMAGHPLKRNSKQRLSSEFEDKMY 419
Query: 416 VLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASN 475
SI ++SGCCQ +P+G +N+HPISISF+ HG DKFLL +LD+Y ++QEQ+ +AS
Sbjct: 420 AFVSIAALSGCCQATVPLGNHNDHPISISFVAAHGSDKFLLRAILDMYSTIQEQIVLASK 479
Query: 476 LVPLPDTNGSIDASELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLE 535
L P + +DASELLKEKGN +FK KQW+KA+ +YS AIKLN T+ATYY NRAAAYLE
Sbjct: 480 LTLPPVIDRDVDASELLKEKGNNSFKRKQWSKAIEFYSGAIKLNETNATYYCNRAAAYLE 539
Query: 536 LGCFQQAEEDCSKTISLDKK 555
LG F+QAE DC + + LDKK
Sbjct: 540 LGRFKQAEADCDQALLLDKK 559
>gi|226491410|ref|NP_001148185.1| LOC100281793 [Zea mays]
gi|195609838|gb|ACG26749.1| amidase [Zea mays]
gi|195614940|gb|ACG29300.1| amidase [Zea mays]
gi|195616542|gb|ACG30101.1| amidase [Zea mays]
Length = 587
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 313/564 (55%), Positives = 406/564 (71%), Gaps = 11/564 (1%)
Query: 14 NPKVWVVIGVSVVGFVVLAETLRRRRNPKLNGR----VDFGAFLERFELIPFPQPPPPAA 69
NP+VW+V ++V G +VLAE + RRR L G D G+F +RFEL P QPPPPAA
Sbjct: 19 NPRVWIVASIAVAGVLVLAE-VARRRRRWLRGMSGTPADAGSFCDRFELHPPAQPPPPAA 77
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R L+GL FA D F+++GYV GFG+PDWK+ H A TAV VT+L K GATC+G+T++D
Sbjct: 78 RHILSGLTFAASDNFEIEGYVAGFGNPDWKKTHETARHTAVAVTMLRKQGATCVGRTIMD 137
Query: 130 EFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
E FG+TGEN H+GTP NP S +PGGS SGSAVAVAAQLVDFA+GTDTIG VR+PASF
Sbjct: 138 ELGFGVTGENLHHGTPANPVSSSLVPGGSCSGSAVAVAAQLVDFAIGTDTIGDVRIPASF 197
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
CG+L +RPS+G +S +G + NSQSLDT+G AR+ ILHRVG VLL ++ R+ +
Sbjct: 198 CGLLCFRPSYGVISTLGTIANSQSLDTIGWFARDPCILHRVGEVLLPAAVGGLKQTRQFV 257
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
FADD FQL KV KT+H I A+++L GYQ P+H+N+GQYI SNVPSLK +T E
Sbjct: 258 FADDCFQLLKVSNQKTVHAIKNAVQALHGYQPPKHINIGQYIYSNVPSLKEFCEPATKLE 317
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
GT+ LKA+S+VML LQRYEFK +EEWV + KP+LG ++ RVL+A+N ++NIK LY
Sbjct: 318 EGTSALKAISTVMLLLQRYEFKANHEEWVNTVKPKLGLDISTRVLQAVNFARENIKSLYA 377
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
+RNE+RAAL+ LLKD ILV+PT + PLK N+K+ S+ F DR + ++SGCC+V
Sbjct: 378 IRNELRAALKNLLKDTGILVLPTTAGYPLKRNSKERLSSGFEDRMYKFVGVAALSGCCEV 437
Query: 430 AIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNLVPLPDTNGSID-- 487
IP+ + H +S+SF+ HG DKFLL +LD Y +Q+QV +AS L P TN +D
Sbjct: 438 TIPMENLDHH-VSLSFVAAHGSDKFLLRNILDTYSLIQDQVVLASKLETAPVTNVDVDVN 496
Query: 488 ASELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQQAEEDCS 547
ASELLKEKGN+AFK +QW KA+ +YSEAI L+ T+ATYY NRAAAYLELG F+QAE DC
Sbjct: 497 ASELLKEKGNSAFKRRQWIKAIEFYSEAISLSDTNATYYCNRAAAYLELGRFKQAEADCD 556
Query: 548 KTISLDKKVRARVGYVDCSMLIYL 571
+ + LD+KV + + C++ + L
Sbjct: 557 RALLLDRKV---IDFCRCNIPVLL 577
>gi|413938943|gb|AFW73494.1| hypothetical protein ZEAMMB73_808672 [Zea mays]
Length = 614
Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust.
Identities = 308/547 (56%), Positives = 398/547 (72%), Gaps = 6/547 (1%)
Query: 14 NPKVWVVIGVSVVGFVVLAETLRRRRN--PKLNGRV-DFGAFLERFELIPFPQPPPPAAR 70
NP+VW+V ++V G +VLAE RRRR ++G D G+F +RFEL P QPPPPAAR
Sbjct: 19 NPRVWIVASIAVAGVLVLAEVARRRRRWLRGMSGTAPDAGSFCDRFELHPPAQPPPPAAR 78
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
L+GL FA D F+++GYV GFG+PDWK+ H A TAV VT+L K GATC+G+T++DE
Sbjct: 79 HILSGLTFAASDNFEIEGYVAGFGNPDWKKTHETARHTAVAVTMLRKQGATCVGRTIMDE 138
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FG+TGEN H+GTP NP S +PGGS SGSAVAVAAQL+DFA+GTDTIG VR+PASFC
Sbjct: 139 LGFGVTGENLHHGTPANPVSSSLVPGGSCSGSAVAVAAQLIDFAIGTDTIGDVRIPASFC 198
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIF 250
G+L +RPS+G +S +G + NSQSLDT+G AR+ ILHRVG VLL ++ R+ +F
Sbjct: 199 GLLCFRPSYGVISTLGTIANSQSLDTIGWFARDPCILHRVGEVLLPAAVGGLKQTRQFVF 258
Query: 251 ADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPEN 310
ADD FQL KV KT+H I A+++L GYQ P+H+N+GQYI SNVPSLK +T E
Sbjct: 259 ADDCFQLLKVSNQKTVHAIKNAVQALRGYQPPKHINIGQYIYSNVPSLKEFCEPATKLEE 318
Query: 311 GTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKV 370
GT+ LKA+S+VML LQRYEFK +EEWV + KP+LG ++ RVL+A+N ++NIK LY +
Sbjct: 319 GTSALKAISTVMLLLQRYEFKANHEEWVNTVKPKLGLDISTRVLQAVNFARENIKSLYAI 378
Query: 371 RNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVA 430
RNE+R AL+ LLKD ILV+PT + PLK N+K+ S+ F DR + ++SGCC+V
Sbjct: 379 RNELRVALKNLLKDTGILVLPTTAGYPLKRNSKERLSSGFEDRMYKFVGVAALSGCCEVT 438
Query: 431 IPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNLVPLPDTNGSID--A 488
IP+ + H +S+SF+ HG DKFLL +LD Y +Q+QV +AS L P TN +D A
Sbjct: 439 IPMENLDHH-VSLSFVAAHGSDKFLLRNILDTYSLIQDQVVLASKLETAPVTNVDVDVNA 497
Query: 489 SELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQQAEEDCSK 548
SELLKEKGN+AFK +QW KA+ +YSEAI L+ T+ATYY NRAAAYLELG F+QAE DC +
Sbjct: 498 SELLKEKGNSAFKRRQWIKAIEFYSEAISLSDTNATYYCNRAAAYLELGRFKQAEADCDR 557
Query: 549 TISLDKK 555
+ LD+K
Sbjct: 558 ALLLDRK 564
>gi|413938944|gb|AFW73495.1| amidase [Zea mays]
Length = 587
Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust.
Identities = 311/563 (55%), Positives = 406/563 (72%), Gaps = 9/563 (1%)
Query: 14 NPKVWVVIGVSVVGFVVLAETLRRRRN--PKLNGRV-DFGAFLERFELIPFPQPPPPAAR 70
NP+VW+V ++V G +VLAE RRRR ++G D G+F +RFEL P QPPPPAAR
Sbjct: 19 NPRVWIVASIAVAGVLVLAEVARRRRRWLRGMSGTAPDAGSFCDRFELHPPAQPPPPAAR 78
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
L+GL FA D F+++GYV GFG+PDWK+ H A TAV VT+L K GATC+G+T++DE
Sbjct: 79 HILSGLTFAASDNFEIEGYVAGFGNPDWKKTHETARHTAVAVTMLRKQGATCVGRTIMDE 138
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FG+TGEN H+GTP NP S +PGGS SGSAVAVAAQL+DFA+GTDTIG VR+PASFC
Sbjct: 139 LGFGVTGENLHHGTPANPVSSSLVPGGSCSGSAVAVAAQLIDFAIGTDTIGDVRIPASFC 198
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIF 250
G+L +RPS+G +S +G + NSQSLDT+G AR+ ILHRVG VLL ++ R+ +F
Sbjct: 199 GLLCFRPSYGVISTLGTIANSQSLDTIGWFARDPCILHRVGEVLLPAAVGGLKQTRQFVF 258
Query: 251 ADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPEN 310
ADD FQL KV KT+H I A+++L GYQ P+H+N+GQYI SNVPSLK +T E
Sbjct: 259 ADDCFQLLKVSNQKTVHAIKNAVQALRGYQPPKHINIGQYIYSNVPSLKEFCEPATKLEE 318
Query: 311 GTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKV 370
GT+ LKA+S+VML LQRYEFK +EEWV + KP+LG ++ RVL+A+N ++NIK LY +
Sbjct: 319 GTSALKAISTVMLLLQRYEFKANHEEWVNTVKPKLGLDISTRVLQAVNFARENIKSLYAI 378
Query: 371 RNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVA 430
RNE+R AL+ LLKD ILV+PT + PLK N+K+ S+ F DR + ++SGCC+V
Sbjct: 379 RNELRVALKNLLKDTGILVLPTTAGYPLKRNSKERLSSGFEDRMYKFVGVAALSGCCEVT 438
Query: 431 IPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNLVPLPDTNGSID--A 488
IP+ + H +S+SF+ HG DKFLL +LD Y +Q+QV +AS L P TN +D A
Sbjct: 439 IPMENLDHH-VSLSFVAAHGSDKFLLRNILDTYSLIQDQVVLASKLETAPVTNVDVDVNA 497
Query: 489 SELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQQAEEDCSK 548
SELLKEKGN+AFK +QW KA+ +YSEAI L+ T+ATYY NRAAAYLELG F+QAE DC +
Sbjct: 498 SELLKEKGNSAFKRRQWIKAIEFYSEAISLSDTNATYYCNRAAAYLELGRFKQAEADCDR 557
Query: 549 TISLDKKVRARVGYVDCSMLIYL 571
+ LD+KV + + C++ + L
Sbjct: 558 ALLLDRKV---IDFCRCNIPVLL 577
>gi|115448751|ref|NP_001048155.1| Os02g0754500 [Oryza sativa Japonica Group]
gi|46805946|dbj|BAD17240.1| putative Toc64 [Oryza sativa Japonica Group]
gi|113537686|dbj|BAF10069.1| Os02g0754500 [Oryza sativa Japonica Group]
gi|215697708|dbj|BAG91702.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623695|gb|EEE57827.1| hypothetical protein OsJ_08425 [Oryza sativa Japonica Group]
Length = 613
Score = 606 bits (1563), Expect = e-171, Method: Compositional matrix adjust.
Identities = 314/545 (57%), Positives = 395/545 (72%), Gaps = 5/545 (0%)
Query: 16 KVWVVIGVSVVGFVVLAETLRRRRNPKLNGRV---DFGAFLERFELIPFPQPPPPAARQP 72
+VW+V GV++ G +V E RRRR + DFGAF RFE+ P PQPPPPAARQ
Sbjct: 19 RVWMVAGVAIAGAIVFVEAARRRRRWLRDRSEVPPDFGAFCYRFEIAPAPQPPPPAARQL 78
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L+GL FA D F+++GYV GFG+PDWKR H A RTAV VT+L K G T +G TV+DE
Sbjct: 79 LSGLTFAASDNFEIEGYVAGFGNPDWKRTHKAATRTAVPVTMLQKQGGTYVGSTVMDELG 138
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
FG++G N H GTP+NP PS PGGS SGSAVAV+AQLVDFALGTDT G VR+PA FCG+
Sbjct: 139 FGVSGGNLHNGTPINPASPSLFPGGSCSGSAVAVSAQLVDFALGTDTTGDVRIPACFCGV 198
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
L ++ SHG VS +G + NSQSLDT+G AR+ S+LHRVG VLL + R+L FAD
Sbjct: 199 LCFKSSHGVVSTLGTIANSQSLDTIGWFARDPSVLHRVGDVLLPAATGGLTQTRQLFFAD 258
Query: 253 DIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGT 312
D FQL KVP KT++VI AI++L GYQ P+H+N+G+YI+S+VPSLK + G
Sbjct: 259 DCFQLLKVPNEKTVNVIENAIQTLPGYQPPKHINIGEYISSHVPSLKDFCEPTVEMLEGM 318
Query: 313 ATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRN 372
+ LKALS+VML LQRYEFKT +E+WV + KP+LG + RVL+A+N+ DNIK LY VRN
Sbjct: 319 SALKALSTVMLLLQRYEFKTNHEDWVNTVKPKLGLDTSTRVLQAVNSKSDNIKSLYIVRN 378
Query: 373 EMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIP 432
E+RAAL+ LLKD ILV+PT + PLK N ++ S F DR I ++SGCCQ IP
Sbjct: 379 ELRAALKNLLKDTGILVLPTTAGYPLKRNARQRLSPGFEDRMSAFVGIATLSGCCQAVIP 438
Query: 433 IGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNLVPLPDTNGSID--ASE 490
+G +N+HPIS+S + HG DKFLL VL ++ S++EQV +AS LV P N D A+E
Sbjct: 439 LGSHNDHPISLSLLAAHGSDKFLLRNVLYMFSSIKEQVVLASKLVTAPVINRDADFGAAE 498
Query: 491 LLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQQAEEDCSKTI 550
LLKEKGN+AFKG++W+KAV +YS+AIKLNGT+ATYYSNRAAAYLELG ++QAE DC + +
Sbjct: 499 LLKEKGNSAFKGRKWSKAVEFYSDAIKLNGTNATYYSNRAAAYLELGRYKQAEADCEQAL 558
Query: 551 SLDKK 555
LDKK
Sbjct: 559 LLDKK 563
>gi|218191602|gb|EEC74029.1| hypothetical protein OsI_08982 [Oryza sativa Indica Group]
Length = 613
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 312/545 (57%), Positives = 393/545 (72%), Gaps = 5/545 (0%)
Query: 16 KVWVVIGVSVVGFVVLAETLRRRRNPKLNGRV---DFGAFLERFELIPFPQPPPPAARQP 72
+VW+V GV++ G +V E RRRR + DFGAF RFE+ P PQPPPPAARQ
Sbjct: 19 RVWIVAGVAIAGAIVFVEAARRRRRWLRDRSEVPPDFGAFCYRFEIAPAPQPPPPAARQL 78
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L+GL FA D F+++GYV GFG+PDWKR H A RTAV VT+L K G T +G TV+DE
Sbjct: 79 LSGLTFAASDNFEIEGYVAGFGNPDWKRTHKAATRTAVPVTMLQKQGGTYVGSTVMDELG 138
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
FG++G N H GTP+NP PS PGGS SGSAVAV+AQLVDFALGTDT G VR+PA FCG+
Sbjct: 139 FGVSGGNLHNGTPINPASPSLFPGGSCSGSAVAVSAQLVDFALGTDTTGDVRIPACFCGV 198
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
L ++ SHG VS +G + NSQSLDT+G AR+ S+LHRVG VLL + R+L FAD
Sbjct: 199 LCFKSSHGVVSTLGTIANSQSLDTIGWFARDPSVLHRVGDVLLPAATGGLTQTRQLFFAD 258
Query: 253 DIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGT 312
D FQL KVP KT++VI AI++L GYQ P+H+N+G+YI+S+VPSLK + G
Sbjct: 259 DCFQLLKVPNEKTVNVIENAIQTLPGYQPPKHINIGEYISSHVPSLKDFCEPTVEMLEGM 318
Query: 313 ATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRN 372
+ LKALS+VML LQRYEFKT +E+WV + KP+LG + RVL+A+N+ DNIK LY VRN
Sbjct: 319 SALKALSTVMLLLQRYEFKTNHEDWVNTVKPKLGPDTSTRVLQAVNSKSDNIKSLYIVRN 378
Query: 373 EMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIP 432
E+RAAL+ LLKD ILV+PT + PLK N ++ S F DR I ++SGCCQ IP
Sbjct: 379 ELRAALKTLLKDTGILVLPTTAGYPLKRNARQRLSPGFEDRMSAFVGIATLSGCCQAVIP 438
Query: 433 IGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNLVPLPDTNGSID--ASE 490
+G +N+ PIS+S + HG DKFLL VL ++ S++EQV +AS LV P N D A+E
Sbjct: 439 LGSHNDDPISLSLLAAHGSDKFLLRNVLYMFSSIKEQVVLASKLVTAPIINRDADFGAAE 498
Query: 491 LLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQQAEEDCSKTI 550
LLKEKGN+AFKG++W+KAV +YS+AIKLNGT+ATYYSNRAAAYLEL ++QAE DC + +
Sbjct: 499 LLKEKGNSAFKGRKWSKAVEFYSDAIKLNGTNATYYSNRAAAYLELSRYKQAEADCEQAL 558
Query: 551 SLDKK 555
LDKK
Sbjct: 559 LLDKK 563
>gi|242065922|ref|XP_002454250.1| hypothetical protein SORBIDRAFT_04g027530 [Sorghum bicolor]
gi|241934081|gb|EES07226.1| hypothetical protein SORBIDRAFT_04g027530 [Sorghum bicolor]
Length = 572
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 289/548 (52%), Positives = 365/548 (66%), Gaps = 50/548 (9%)
Query: 14 NPKVWVVIGVSVVGFVVLAETLRRRRNPKLNGRV----DFGAFLERFELIPFPQPPPPAA 69
NP+VW+V G++V G +VLAE + RRR L G D G+F +RFEL P PQPPPPAA
Sbjct: 19 NPRVWIVAGIAVAGVIVLAE-VARRRRRWLRGMSGTPPDAGSFCDRFELHPPPQPPPPAA 77
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R L+GL FA D F+V+GYV GFG+PDWK H A TAV VT+L K GATC+G+T++D
Sbjct: 78 RHLLSGLTFAASDNFEVEGYVAGFGNPDWKNTHEAARHTAVAVTMLRKQGATCVGRTIMD 137
Query: 130 EFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
E FG+TGEN H+GTP NP PS +PGGS SGSAVAVAAQLVDFA
Sbjct: 138 ELGFGVTGENLHHGTPANPVSPSLVPGGSCSGSAVAVAAQLVDFA--------------- 182
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
+G AR+ ILHRVG VLL A ++ R+++
Sbjct: 183 ---------------------------IGWFARDPCILHRVGEVLLPTAAGGLKQTRQIV 215
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
FADD FQL KV KT+H I A+++L GYQ P+H+N+GQYI SNVPSLK +T +
Sbjct: 216 FADDCFQLLKVSNQKTVHAIKNAVQALRGYQPPKHINIGQYICSNVPSLKEFCEPATKLQ 275
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
GT+ LKA+S+VML LQRYEFK +EEWV + KP+LG ++ RVL+A+N +NIK LY
Sbjct: 276 EGTSALKAISTVMLLLQRYEFKANHEEWVNTVKPKLGLDISTRVLQAVNFAHENIKSLYA 335
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
VRNE+RAAL+ LLKD ILV+PT + PLK N+K+ S+ F DR I ++SGCC+V
Sbjct: 336 VRNELRAALKNLLKDTGILVLPTTAGYPLKRNSKERLSSGFEDRMYKFVGIAALSGCCEV 395
Query: 430 AIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNLVPLPDTNGSID-- 487
IP+ + H +S+SF+ HG DKFLL TVLD Y +Q+QV +AS L P TN ID
Sbjct: 396 TIPMENLDHH-VSLSFVAAHGLDKFLLHTVLDTYSLIQDQVVLASKLETAPVTNVDIDVN 454
Query: 488 ASELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQQAEEDCS 547
ASELLKEKGN+AFK +QW+KA+ +YSEAI L+ T+ATYY NRAAAYLELG +Q E DC
Sbjct: 455 ASELLKEKGNSAFKRRQWSKAIEFYSEAISLSDTNATYYCNRAAAYLELGRLKQVEGDCD 514
Query: 548 KTISLDKK 555
+ + LD+K
Sbjct: 515 RALLLDRK 522
>gi|225456155|ref|XP_002282402.1| PREDICTED: translocon at the outer membrane of chloroplasts 64
[Vitis vinifera]
gi|297734325|emb|CBI15572.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 282/517 (54%), Positives = 366/517 (70%)
Query: 39 RNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDW 98
R K R DFGAF++R +L+P PQP PP A PL L FA+ DVFD++GYVTGFG+PDW
Sbjct: 24 RKLKKTIREDFGAFVQRLQLLPPPQPAPPKAPHPLTNLSFAVSDVFDIEGYVTGFGNPDW 83
Query: 99 KRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGS 158
R H A RT+ VV+ L++ GATC GKTV+DE A+ I GENKHYGTP NP PS IPGGS
Sbjct: 84 ARTHDTASRTSPVVSALVEGGATCTGKTVVDEMAYSINGENKHYGTPTNPAAPSRIPGGS 143
Query: 159 SSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVG 218
SSG+AVAVAA VDF+LG DT+G VRVPA+FCG++G+RPSHG VS +G++ S SLDTVG
Sbjct: 144 SSGAAVAVAANFVDFSLGLDTVGGVRVPAAFCGVIGFRPSHGAVSHMGIIHVSSSLDTVG 203
Query: 219 LLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSG 278
A++ SIL RVGHVLLQL R R++IFADD FQ ++P + V+ K+ E L G
Sbjct: 204 WFAKDPSILRRVGHVLLQLTYAVQRSPRQIIFADDCFQSLRIPVDRVYQVVLKSTEKLFG 263
Query: 279 YQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWV 338
Q + N+ Y+ S VPSLK +Q T+ E + +++L +M LQR+EFK +EEW+
Sbjct: 264 RQVLKRENLENYLDSKVPSLKAFHSQKTNGETRNSLIRSLVKIMHCLQRHEFKHNHEEWI 323
Query: 339 KSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPL 398
S KP L ++ ++ + + I+ R E+R+AL LLKDD ILVIPTV+DPP
Sbjct: 324 NSVKPILDASISSQLHDVLEVADTEIENCQSSRMEIRSALNSLLKDDGILVIPTVADPPP 383
Query: 399 KLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDT 458
KL K++ S E+ +RTL L SI SMSGCCQV +P+G Y+++P+S+SF+ HGGD+FLLDT
Sbjct: 384 KLGGKESLSEEYQNRTLGLLSIASMSGCCQVTVPLGLYDKYPVSVSFMARHGGDRFLLDT 443
Query: 459 VLDLYDSLQEQVNIASNLVPLPDTNGSIDASELLKEKGNAAFKGKQWNKAVNYYSEAIKL 518
V +Y SLQEQ +IA+ + ++E+ KEKGN AFK KQW KAV +Y+EAIKL
Sbjct: 444 VQTMYASLQEQADIAAKSKLSSNAVDRETSAEIAKEKGNQAFKDKQWQKAVGFYTEAIKL 503
Query: 519 NGTSATYYSNRAAAYLELGCFQQAEEDCSKTISLDKK 555
+G +ATYYSNRAAAYLE+G F QAE DC++ I+LDKK
Sbjct: 504 SGNNATYYSNRAAAYLEMGSFLQAEADCTEAINLDKK 540
>gi|44662987|gb|AAS47584.1| chloroplast Toc64-1 [Physcomitrella patens]
Length = 592
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 272/537 (50%), Positives = 375/537 (69%), Gaps = 8/537 (1%)
Query: 19 VVIGVSVVGFVVLAETLRRRRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKF 78
V+ G+ + G +L RR +L G D GAF+E FEL+P P PPPP+A PL+GL F
Sbjct: 13 VLFGLGLAGIFIL-----RRNLFRLTGGKDNGAFIEYFELLPPPPPPPPSAPHPLSGLTF 67
Query: 79 AIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGE 138
AIKD+FD++G+VTGFG+PDW H A RTA V +L++ GATCIGK ++DE A+ I G+
Sbjct: 68 AIKDIFDIEGFVTGFGNPDWASTHEPATRTAAAVKVLVEAGATCIGKLIMDELAYSIIGD 127
Query: 139 NKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPS 198
NKHYGTPVNP P+ IPGGSSSGS VAVAA LVDF+LGTDT G VRVPA+FCGILG+RPS
Sbjct: 128 NKHYGTPVNPAAPNRIPGGSSSGSGVAVAADLVDFSLGTDTAGSVRVPAAFCGILGFRPS 187
Query: 199 HGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIFQLS 258
HG VS +GV P +QSLDTVG AR+ +IL +VGH+LLQL ++ R+ RR ADD F++S
Sbjct: 188 HGAVSTVGVTPMAQSLDTVGCFARDPAILRQVGHILLQLPYMDVRQPRRFFIADDCFKIS 247
Query: 259 KVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTATLKAL 318
+P ++ + K+I+ L G Q +H+N+G Y+A VPSLK L+ + + G+ L L
Sbjct: 248 LIPTELSLGTVVKSIQKLLGRQVLQHINLGDYVARTVPSLKELQKEISDSNLGSLAL--L 305
Query: 319 SSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNEMRAAL 378
+ M LQR+EFK +EEW+ + KP L + R A+ T+ + + +L K+++E R A+
Sbjct: 306 RTAMQILQRWEFKLNHEEWLTTVKPDLAPALAARTKLALETSSNLVPLLQKIKDETRYAI 365
Query: 379 QRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNE 438
LLK+D +LV+PTV D P KLNTK F ++TL L + MS CCQV +P G ++
Sbjct: 366 SELLKNDSLLVMPTVPDIPPKLNTKAEALEVFRNKTLDLICVAGMSSCCQVTMPAGNHDG 425
Query: 439 HPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNLVPLPDTNGSIDASELLKEKGNA 498
P+++S + G D+FLLDTVL +Y ++QE+ +A++ P ++G+ A+EL KEKGNA
Sbjct: 426 VPMAVSLLAKQGSDRFLLDTVLAIYSTVQEEDKVAAD-QPSIVSDGNSAAAELAKEKGNA 484
Query: 499 AFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQQAEEDCSKTISLDKK 555
AFK K + KAV +Y++AI+LNG +ATYY+NRA AYL+L F +AE DC+K ++LDK+
Sbjct: 485 AFKEKDYKKAVGFYTDAIRLNGNNATYYNNRAMAYLQLCSFSEAESDCTKALNLDKR 541
>gi|255579275|ref|XP_002530483.1| amidase, putative [Ricinus communis]
gi|223529980|gb|EEF31906.1| amidase, putative [Ricinus communis]
Length = 589
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 279/545 (51%), Positives = 380/545 (69%), Gaps = 10/545 (1%)
Query: 13 SNP-KVWVVIGVSVVGFVVLAETLRRRRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQ 71
SNP +WV++G+ + G +++ + L++ R DFGAF+++ +L+P P P PP A
Sbjct: 3 SNPANLWVLLGLGIAGILLVTKKLKKVI------REDFGAFVQKLQLLPPPPPAPPKAPH 56
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL GL FA+ DVFD++GYVTGFG PDW R H A +T++VV+ L++ GATCIGKTV+DE
Sbjct: 57 PLTGLTFAVSDVFDIEGYVTGFGHPDWARTHEAASQTSLVVSALVEGGATCIGKTVVDEL 116
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+ I GEN+HYGTP NP +P+ +PGGSSSG+AVAVAA LVDF+LG DT+G VRVPA FCG
Sbjct: 117 AYSINGENEHYGTPTNPAVPARVPGGSSSGAAVAVAANLVDFSLGVDTVGGVRVPAGFCG 176
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
I+G+RPS+G + G+LP S SLDTVG AR+ +++ RVGH+LLQL R +++I A
Sbjct: 177 IIGFRPSYGAIPNTGILPISASLDTVGWFARDPNVIRRVGHLLLQLPFGVQRNPKQIIIA 236
Query: 252 DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENG 311
DD FQL K+P + V+ K+ E + G Q H + + S V SLK L Q T+ E
Sbjct: 237 DDCFQLLKIPVDRIAQVVIKSTEKIFGRQVLRHEILEDVLFSRVRSLKLLHDQKTNGELR 296
Query: 312 TATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVR 371
T++++ L+++M L RYEF+ +EEW+ KP + +N+ ++ E ++ I+I +R
Sbjct: 297 TSSIRLLANIMRLLHRYEFRHNHEEWINIEKPNVDHNISAQIHEIVDIPDTEIEIFKSIR 356
Query: 372 NEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAI 431
EMRAA+ LLKDD ILVIPT + P KL K S ++ L SI S+SGCCQV I
Sbjct: 357 QEMRAAINSLLKDDGILVIPTTAHLPPKLGGKDMLSEDYQILLFSLLSIASLSGCCQVTI 416
Query: 432 PIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNLVPLPDTNGSIDAS-E 490
P+G Y + P+S+SFI HGGD+FL+DTV ++Y SLQEQV++ + P T+ + + S E
Sbjct: 417 PLGLYEKCPVSVSFIARHGGDRFLMDTVQNMYSSLQEQVDMLAK--PKSHTSDNQERSAE 474
Query: 491 LLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQQAEEDCSKTI 550
+ KEKGN A+K KQW KA++YY+EAIKLNG +ATYYSNRAAAYLELG F QAE DC+K I
Sbjct: 475 MAKEKGNQAYKEKQWQKAISYYTEAIKLNGKNATYYSNRAAAYLELGSFLQAEADCTKAI 534
Query: 551 SLDKK 555
+LDKK
Sbjct: 535 NLDKK 539
>gi|224135565|ref|XP_002322105.1| amidase family protein [Populus trichocarpa]
gi|222869101|gb|EEF06232.1| amidase family protein [Populus trichocarpa]
Length = 592
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 279/544 (51%), Positives = 374/544 (68%), Gaps = 8/544 (1%)
Query: 13 SNP-KVWVVIGVSVVGFVVLAETLRRRRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQ 71
SNP +WV++G+ + G + + ++ R DFGAF+ + +L+P PQP PP A
Sbjct: 3 SNPANLWVLLGLGLAGIFLFTKKFKKVL------REDFGAFIHKLQLLPPPQPAPPKAPH 56
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL GL FA+ D+FD++GYVTGFG PDW + H A RT+VVV+ L++ GATC+GKTV+DE
Sbjct: 57 PLTGLTFAVSDLFDIEGYVTGFGHPDWAKTHEAASRTSVVVSTLVEGGATCVGKTVIDEL 116
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+ ITGENKHYGTP NP P+ +PGGSSSG+AVAVAA LVDF+LG DT+G VRVPA FCG
Sbjct: 117 AYSITGENKHYGTPTNPVEPARVPGGSSSGAAVAVAANLVDFSLGVDTVGGVRVPAGFCG 176
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
I+G+RPS+G +S IGVLP S SLDTVG A++ +IL RVGHVLLQ R R++I A
Sbjct: 177 IIGFRPSYGAISKIGVLPVSVSLDTVGWFAKDPNILRRVGHVLLQSAFGGQRSPRQIIMA 236
Query: 252 DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENG 311
DD FQL K+P + V+ K+ E G Q +H + Y+ S VPSLK + T+ E
Sbjct: 237 DDCFQLLKIPVDRIAQVVVKSTEKHFGRQLLKHEILDVYLNSKVPSLKEFHNKKTNGEVK 296
Query: 312 TATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVR 371
T++++ L++VM L RYEF++ +EEW+ + KP L N+ ++ E + + I++ +R
Sbjct: 297 TSSIRLLANVMQLLHRYEFRSNHEEWINTVKPILEPNLSAQMNEIMELSDAEIELCKSIR 356
Query: 372 NEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAI 431
EMR+A+ LLKDD ILV+PT + P KL K+ S E+ + L SI S+SGCCQV +
Sbjct: 357 EEMRSAINSLLKDDGILVVPTTAYLPPKLGGKEILSEEYQSSSFGLLSIASLSGCCQVTV 416
Query: 432 PIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNLVPLPDTNGSIDASEL 491
P+G YN+ P+S+S I HG D+FLLDTV +Y +LQEQ N + + +++E+
Sbjct: 417 PLGYYNKCPVSVSLIARHGSDRFLLDTVQTMYKTLQEQAETYVN-SKSSNKDSRENSAEM 475
Query: 492 LKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQQAEEDCSKTIS 551
KEKGN AFK +QW KA++YY+EAIKLN +ATYYSNRAAAYLELG FQ AE DCS I+
Sbjct: 476 AKEKGNQAFKEQQWQKAISYYNEAIKLNDKNATYYSNRAAAYLELGSFQHAEADCSNAIN 535
Query: 552 LDKK 555
LDKK
Sbjct: 536 LDKK 539
>gi|168058781|ref|XP_001781385.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667196|gb|EDQ53832.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 603
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 269/556 (48%), Positives = 374/556 (67%), Gaps = 17/556 (3%)
Query: 19 VVIGVSVVGFVVLAETLRRRRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKF 78
++IG+ + GF VL RR +L + D GAF+E FEL P P +A QPL+GL F
Sbjct: 14 ILIGLGLAGFFVL------RRALRLAVKRDNGAFIEYFELPPATSPS--SAPQPLSGLTF 65
Query: 79 AIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGE 138
A+KD+FDV+G+VTGFG+PDW H A RTA+ V L+ +GATC+GK +DE A+ I G+
Sbjct: 66 AVKDIFDVEGFVTGFGNPDWAATHEPATRTALAVKYLVDSGATCVGKLHMDELAYSIIGD 125
Query: 139 NKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPS 198
NKHYGTPVNP P+ +PGGSSSGS VAVAA LVDF+LGTDT G VRVPA+FCGILG+RPS
Sbjct: 126 NKHYGTPVNPAAPTRVPGGSSSGSGVAVAADLVDFSLGTDTAGSVRVPAAFCGILGFRPS 185
Query: 199 HGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIFQLS 258
HG V +IGV+P +QS DTVG A++ +IL +VGH+LLQL+ + R+ +R + ADD F+LS
Sbjct: 186 HGAVPVIGVIPMAQSFDTVGCFAKDPTILRQVGHILLQLSYTDVRKPQRFLIADDCFELS 245
Query: 259 KVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTATLKAL 318
+P ++ + ++I+ L G + +H+N+G Y+AS VPSLK L+ + S + G +L L
Sbjct: 246 LIPNEASVGAVIRSIQKLFGRKALQHINLGDYVASAVPSLKVLQKEIGS-DMGAISL--L 302
Query: 319 SSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNEMRAAL 378
+ M +QR+EFK +E W+ +A P LG R A+ TT + +L ++++E R A+
Sbjct: 303 RTAMQMIQRWEFKVNHEGWLTTANPNLGPATAARTKAALETTSHLLPLLQRIKDEARYAI 362
Query: 379 QRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNE 438
LLKDD +LV+PTV D P KLNTK EF +R + L I MSGCCQV +P G++++
Sbjct: 363 NDLLKDDMLLVLPTVPDIPPKLNTKPESLEEFRNRAMDLICIAGMSGCCQVTMPAGEHDD 422
Query: 439 HPISISFITYHGGDKFLLDTVLDLYDSLQ-EQVNIASNLVPLPDTNGSIDASELLKEKGN 497
P+++S + G D+FLLDT+L LY ++Q E A+ L +NG DA+EL KEKGN
Sbjct: 423 VPMAVSLLARQGSDRFLLDTLLALYATVQVEDKADANQRASL--SNGHFDAAELAKEKGN 480
Query: 498 AAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQQAEEDCSKTISLDK--- 554
AAFK + A+++Y++AI++ G + TYY+NRA AYL+L + +AE DC+K + LDK
Sbjct: 481 AAFKRNDFKNAISHYTDAIRIRGNNPTYYNNRAMAYLQLRSYSEAEADCTKALILDKNSV 540
Query: 555 KVRARVGYVDCSMLIY 570
K R G SM Y
Sbjct: 541 KAYLRRGTARESMGYY 556
>gi|449497473|ref|XP_004160411.1| PREDICTED: translocon at the outer membrane of chloroplasts 64-like
[Cucumis sativus]
Length = 591
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 270/510 (52%), Positives = 359/510 (70%)
Query: 46 RVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEA 105
R DFGAF+E+F+L+P PQP PP A PL GL FA+ DVF+++G+VTGFG PDW + H A
Sbjct: 31 REDFGAFIEKFQLLPPPQPAPPKAPHPLTGLTFAVSDVFEIEGHVTGFGHPDWAKTHDAA 90
Query: 106 ERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVA 165
RT+ VV+ L++ GATCIGKTV +E + GI+GENK+Y TP NP S +PGGSSSG+AVA
Sbjct: 91 SRTSPVVSALVEGGATCIGKTVTNELSMGISGENKYYETPTNPASHSKVPGGSSSGAAVA 150
Query: 166 VAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNAS 225
VAA LVDF+LG DT+G VR+PASFCGILG+RPSHG+VS +G++P S SLDTVG+ A++ +
Sbjct: 151 VAANLVDFSLGIDTVGDVRIPASFCGILGFRPSHGSVSQVGIVPVSLSLDTVGMFAKDPN 210
Query: 226 ILHRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHM 285
+L RVGHVLLQL R R++I ADD FQL K+P + ++K+ E L G Q +H
Sbjct: 211 VLRRVGHVLLQLPYAVQRNPRQIIIADDCFQLLKIPVDRITQAVTKSTEKLFGRQALKHE 270
Query: 286 NVGQYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRL 345
N+G Y++S VP+LK L + T+ +A+++ L+++M +++R EFK + EW+ S KP L
Sbjct: 271 NLGSYLSSKVPNLKELIGKKTNGNLNSASIRVLANLMQTVERIEFKGNHGEWIDSVKPDL 330
Query: 346 GYNVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKT 405
+ E++ E + + I+ VRNEMR A+ LLKDD +LVIPT DPP KL K+
Sbjct: 331 DSALMEQLNEKLEISDTMIEKFKSVRNEMRMAINSLLKDDGVLVIPTTVDPPPKLGGKEI 390
Query: 406 YSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDS 465
+S E+ R SI S+SGCCQV +P+G ++ P+S+SF+ HG D+FLLD V +Y S
Sbjct: 391 FSEEYQTRVFSSLSIASISGCCQVTLPLGFHDSCPVSVSFLARHGADRFLLDIVQTMYKS 450
Query: 466 LQEQVNIASNLVPLPDTNGSIDASELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATY 525
LQE+ AS + ++E+ KEKGN A+K KQW KA+ Y+EAIKLN +ATY
Sbjct: 451 LQEEAEAASKSKFSKNAVSQEQSAEIAKEKGNQAYKEKQWEKAIGCYTEAIKLNSRNATY 510
Query: 526 YSNRAAAYLELGCFQQAEEDCSKTISLDKK 555
YSNRAAAYLELG F QAE DCSK I LDKK
Sbjct: 511 YSNRAAAYLELGRFHQAEADCSKAIDLDKK 540
>gi|326531444|dbj|BAJ97726.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 588
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 262/546 (47%), Positives = 365/546 (66%), Gaps = 9/546 (1%)
Query: 11 NTSNPKVWVVIGVSVVGFVVLAETLRRRRNPKLNGRVDFGAFLERFELIPFPQPPPPAAR 70
+++ +WV++G+ + G ++ A+ L+R P D GAF+ R EL+P PQPPPP AR
Sbjct: 3 SSTAANLWVLLGLGIAGVLLAAKRLKRPARP------DHGAFVSRLELLPPPQPPPPQAR 56
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
PL L FAI D F V GY+T FGS +W + H EA +T++VV+ L+ GA C+GKTV+DE
Sbjct: 57 HPLTDLCFAIADAFHVSGYITSFGSLEWAKTHDEATQTSLVVSTLVDGGAICVGKTVIDE 116
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
A+ I GENKH+GTP NP +PGG SSGSAVAVA +VDFALG D+IG VRVP +C
Sbjct: 117 MAYSIHGENKHFGTPTNPAASDRVPGGCSSGSAVAVAGGMVDFALGIDSIGGVRVPGGYC 176
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIF 250
G+L +RPSH +S GV+P + SLDT+G AR+ +L RVGH+LL+L+ + R R
Sbjct: 177 GVLAFRPSHAVISNSGVIPVAPSLDTIGWFARDPIVLRRVGHLLLKLSYTDIRLPRHFYI 236
Query: 251 ADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPEN 310
ADD F++SK+P + V++K++E L G Q H+N+G Y+AS +PSL+ + ++
Sbjct: 237 ADDCFEISKIPARRLTQVVTKSVEKLYGRQVLSHVNLGNYLASKIPSLRNYSNGQKNGDS 296
Query: 311 GTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKV 370
++L+ALSS M L ++EF+ + EW+ SAK + ++ + + ++T I I+ V
Sbjct: 297 KFSSLQALSSAMQLLHKHEFRDQHNEWINSAKSSVDASIVGNLSDDGDST---INIIQDV 353
Query: 371 RNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVA 430
R E+R AL LLKDD ILVIPT P K+N ++ S ++ TL L S+ SMSGCCQV
Sbjct: 354 RKEVRLALNTLLKDDGILVIPTALGCPPKINARELSSTSYNAETLYLQSLSSMSGCCQVT 413
Query: 431 IPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNLVPLPDTNGSIDASE 490
+PIG +++ PIS+SFI HGGD+FLLDT +Y ++QEQV I + + +A+E
Sbjct: 414 VPIGTHDKCPISVSFIARHGGDRFLLDTTQAIYATIQEQVEILAKSNASSKEAMNEEAAE 473
Query: 491 LLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQQAEEDCSKTI 550
KEKGN+AFK KQW KA+N Y+EAIKLNG ATYYSNRAAA+LEL ++QAE DC+ I
Sbjct: 474 AAKEKGNSAFKEKQWQKAINLYTEAIKLNGKVATYYSNRAAAFLELANYRQAETDCTSAI 533
Query: 551 SLDKKV 556
+D K+
Sbjct: 534 DIDPKI 539
>gi|44662989|gb|AAS47585.1| chloroplast Toc64-2 [Physcomitrella patens]
Length = 585
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 261/541 (48%), Positives = 369/541 (68%), Gaps = 18/541 (3%)
Query: 17 VWVVIGVSVVGFVVLAETLRRRRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGL 76
+ V++G+ + GF +L RR K + + D GAF+ FEL+P P PPPP+A PL+GL
Sbjct: 11 IGVLLGLGIAGFFIL------RRTLKSSSKKDNGAFIYYFELLPPPPPPPPSAPLPLSGL 64
Query: 77 KFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGIT 136
FA+KD+FDV+G++TGFG+P W H A TA V +L++ GA C+GK +DE A+ I
Sbjct: 65 TFAVKDIFDVEGFITGFGNPVWAETHEPATVTAPAVKVLVEAGAKCVGKLHMDELAYSIN 124
Query: 137 GENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYR 196
GENKHYGTPVNP P+ IPGGSSSGSAVAVAA VDF+LGTDT G VRVPA+FCGILG+R
Sbjct: 125 GENKHYGTPVNPAAPNRIPGGSSSGSAVAVAANCVDFSLGTDTGGSVRVPAAFCGILGFR 184
Query: 197 PSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIFQ 256
PSHG +S+ GVLP +QS DTVG A++ L +VGH LLQL + ++ RR++ ADD F+
Sbjct: 185 PSHGAISVSGVLPMAQSFDTVGWFAKDPKTLRQVGHALLQLPYSDSKQPRRVLIADDCFK 244
Query: 257 LSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGT--AT 314
LS +P + + ++++ L G Q +++N+G +I NVPSLK L + + NG+
Sbjct: 245 LSLIPNEDVVGAVIRSVQKLLGRQVLQYINLGDFIRRNVPSLKELEKEIS---NGSPIGA 301
Query: 315 LKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNEM 374
L L + M LQR+EFK ++EW+++AKP L ++ RV A++ D + ++ ++RNE
Sbjct: 302 LTLLRTAMQLLQRWEFKENHQEWLENAKPDLSSDIAARVQAALDMKGDQVSLVQQIRNEA 361
Query: 375 RAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIG 434
R A+ LLK+D ILV+PTV D P KL K + EF R L S+ MSGCCQV++P+G
Sbjct: 362 RFAINDLLKNDTILVMPTVPDIPPKLGIKADFPDEFRARAFDLLSVSGMSGCCQVSVPVG 421
Query: 435 KYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNLVPLPDTNGSIDASELLKE 494
+YN P ++S + G D+FLLDTVL Y ++QE+ AS+ S +A+E+ KE
Sbjct: 422 EYNNVPTAVSLLAKRGSDRFLLDTVLTAYPTIQEEAKGASDRF-------SAEAAEMAKE 474
Query: 495 KGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQQAEEDCSKTISLDK 554
KGNA+FK K + KA+++Y++AI+++ +AT+Y+NRA AYL+L FQ+AE DC+K + LDK
Sbjct: 475 KGNASFKEKDYKKAISHYTDAIRMDENNATFYNNRAMAYLQLCSFQEAEADCTKALGLDK 534
Query: 555 K 555
K
Sbjct: 535 K 535
>gi|356512970|ref|XP_003525187.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like
[Glycine max]
Length = 587
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 270/516 (52%), Positives = 355/516 (68%), Gaps = 2/516 (0%)
Query: 42 KLNG--RVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWK 99
KLN R DFGAF+ + +L+P PQP PP A PL L FA+ D+F + G+V FG PDW
Sbjct: 22 KLNKSVREDFGAFIHKLQLLPPPQPSPPKAPHPLTSLTFALSDLFHIHGHVPSFGHPDWA 81
Query: 100 RDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSS 159
R H + TA V+ L++ GATC+ TVLD+ A GI GENKH+GTP NP +P+ +PGGSS
Sbjct: 82 RTHEPSSSTAPAVSALVEGGATCVATTVLDDLALGIGGENKHFGTPTNPAVPARVPGGSS 141
Query: 160 SGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGL 219
SG+AVAVAA VDFALG DT G VRVPA FCGILG+RPSHG VS +G++P S SLDTVG
Sbjct: 142 SGAAVAVAANFVDFALGIDTTGGVRVPAGFCGILGFRPSHGAVSHMGIIPISTSLDTVGW 201
Query: 220 LARNASILHRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGY 279
A++ +IL RVGH+LLQ V R R+++ ADD FQ VP ++ V+ KA E L G
Sbjct: 202 FAKDPNILRRVGHILLQAPFVMQRSPRQIVIADDCFQHINVPLDRSSQVVVKATEKLFGR 261
Query: 280 QNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVK 339
Q +H+N+G Y++S VPSLKG Q + E ++LK L+ +M LQR+EF+ +++W+
Sbjct: 262 QVLKHINLGDYLSSRVPSLKGCSGQKPNGEVKASSLKLLAHIMQFLQRHEFRLKHDDWMN 321
Query: 340 SAKPRLGYNVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLK 399
+ KP L V ++ E + I+ VR+EMRAA+ LLKD+ ILVIPTV+DPP K
Sbjct: 322 TVKPDLHPGVSAQLHEKFEVSDAEIENSKSVRSEMRAAVNSLLKDEGILVIPTVADPPPK 381
Query: 400 LNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTV 459
L K+ S ++ R L SI S+SGCCQV+IP+G Y+++P+S+S I HGGD+FLLDT+
Sbjct: 382 LGGKEILSEDYQSRAFSLLSIASISGCCQVSIPLGFYDKYPVSVSLIARHGGDRFLLDTL 441
Query: 460 LDLYDSLQEQVNIASNLVPLPDTNGSIDASELLKEKGNAAFKGKQWNKAVNYYSEAIKLN 519
+Y +LQEQ +IAS + ++E+ KEKGN A+K KQW KA+ +Y+EAIKL
Sbjct: 442 QTVYTTLQEQADIASKSKSSGNVVSKEQSAEIAKEKGNQAYKDKQWQKAIGFYTEAIKLC 501
Query: 520 GTSATYYSNRAAAYLELGCFQQAEEDCSKTISLDKK 555
G +ATYYSNRA AYLEL + QA EDC+K ISLDKK
Sbjct: 502 GDNATYYSNRAQAYLELESYLQAVEDCTKAISLDKK 537
>gi|224118646|ref|XP_002317872.1| amidase family protein [Populus trichocarpa]
gi|222858545|gb|EEE96092.1| amidase family protein [Populus trichocarpa]
Length = 593
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 261/510 (51%), Positives = 355/510 (69%), Gaps = 1/510 (0%)
Query: 46 RVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEA 105
R DFGAF+E+ L+P PQPPPP A PL L FA+ D+F+++GYV+GFG P+W + H A
Sbjct: 32 RQDFGAFIEKLLLVPPPQPPPPKAPHPLTALTFAVSDLFEIEGYVSGFGHPEWAKTHQAA 91
Query: 106 ERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVA 165
RT++VV+ L+ GATC+GKTV+DE A+ I GENKHYGTP+NP +P+ +PGGS SG+AVA
Sbjct: 92 SRTSLVVSTLVDGGATCVGKTVIDELAYSIHGENKHYGTPINPVVPARVPGGSCSGAAVA 151
Query: 166 VAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNAS 225
VAA LVDF+LG DT+G VRVPA FCG++G+RPS+G +S GVLP S SLDTVG A++ +
Sbjct: 152 VAANLVDFSLGVDTVGGVRVPAGFCGVIGFRPSYGAISKTGVLPVSASLDTVGWFAKDPN 211
Query: 226 ILHRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHM 285
IL RVGHVLLQ R R++I A+D FQL K+P + V+ + E G Q +H
Sbjct: 212 ILRRVGHVLLQPAFGGQRSPRQIIMAEDCFQLLKIPVDRVAQVVVNSTEKHFGRQVLKHE 271
Query: 286 NVGQYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRL 345
+ Y+ S VPSLK + + + T++++ L+ VM L RYEF++ +EEW+ + KP L
Sbjct: 272 ILDVYLNSKVPSLKEFHNKKKNGDVKTSSIRLLAHVMQLLHRYEFRSNHEEWINTEKPIL 331
Query: 346 GYNVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKT 405
+ ++ E + ++ I++ +R EMR A+ LLKDD ILV+PT++ P KL+ K+
Sbjct: 332 EPDFSAQMNEIMKISEAEIELCKSIREEMRLAINSLLKDDGILVVPTMAYLPPKLDGKEI 391
Query: 406 YSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDS 465
S E+ + L SI S+SGCCQV +P+G Y++ P+S+S I HG D+FLLDT+ +Y S
Sbjct: 392 LSEEYKSSSFSLLSIASLSGCCQVTVPLGYYDKCPVSVSLIARHGNDRFLLDTLQTMYAS 451
Query: 466 LQEQVNIASNLVPLPDTNGSIDASELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATY 525
LQEQ +T+ +++E+ KEKGN AFK KQW KA++YY+EAIKLN +ATY
Sbjct: 452 LQEQAETHVK-SKSRNTDSGENSAEMAKEKGNQAFKEKQWKKAISYYNEAIKLNDKNATY 510
Query: 526 YSNRAAAYLELGCFQQAEEDCSKTISLDKK 555
YSNRAAAYLELG F QAE DCSK I+LDKK
Sbjct: 511 YSNRAAAYLELGSFHQAEADCSKAINLDKK 540
>gi|449439139|ref|XP_004137345.1| PREDICTED: LOW QUALITY PROTEIN: translocon at the outer membrane of
chloroplasts 64-like [Cucumis sativus]
Length = 585
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 266/510 (52%), Positives = 353/510 (69%), Gaps = 6/510 (1%)
Query: 46 RVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEA 105
R DFGAF+E+F+L+P PQP PP A PL GL FA+ DVF+++G+VTGFG PDW + H A
Sbjct: 31 REDFGAFIEKFQLLPPPQPAPPKAPHPLTGLTFAVSDVFEIEGHVTGFGHPDWAKTHDAA 90
Query: 106 ERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVA 165
+ L++ GATCIGKTV +E + GI+GENKHY TP NP S +PGGSSSG+AVA
Sbjct: 91 ------XSALVEGGATCIGKTVTNELSMGISGENKHYETPTNPASHSKVPGGSSSGAAVA 144
Query: 166 VAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNAS 225
VAA LVDF+LG DT+G VR+PASFCGILG+RPSHG+VS +G++P S SLDTVG+ A++ +
Sbjct: 145 VAANLVDFSLGIDTVGDVRIPASFCGILGFRPSHGSVSQVGIVPVSLSLDTVGMFAKDPN 204
Query: 226 ILHRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHM 285
+L RVGHVLLQL R R++I ADD FQL K+P + ++K+ E L G Q +H
Sbjct: 205 VLRRVGHVLLQLPYAVQRNPRQIIIADDCFQLLKIPVDRITQAVTKSTEKLFGRQALKHE 264
Query: 286 NVGQYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRL 345
N+G Y++S VP+LK L + T+ +A+++ L+++M +++R EFK + EW+ S KP L
Sbjct: 265 NLGSYLSSKVPNLKELIGKKTNGNLNSASIRVLANLMQTVERIEFKGNHGEWIDSVKPDL 324
Query: 346 GYNVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKT 405
+ E++ E + + I+ VRNEMR A+ LLKDD +LVIPT D P KL K+
Sbjct: 325 DSALMEQLNEKLEISDTMIEKFKSVRNEMRMAINSLLKDDGVLVIPTTVDSPPKLGGKEI 384
Query: 406 YSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDS 465
+S E+ R SI S+SGCCQV +P+G ++ P+S+SF+ HG D+FLLD V +Y S
Sbjct: 385 FSEEYQTRVFSSLSIASISGCCQVTLPLGFHDSCPVSVSFLARHGADRFLLDIVQTMYRS 444
Query: 466 LQEQVNIASNLVPLPDTNGSIDASELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATY 525
LQE+ AS + ++E+ KEKGN A+K KQW KA+ Y+EAIKLN +ATY
Sbjct: 445 LQEEAEAASKSKFSKNAVSQEQSAEIAKEKGNQAYKEKQWEKAIGCYTEAIKLNSRNATY 504
Query: 526 YSNRAAAYLELGCFQQAEEDCSKTISLDKK 555
YSNRAAAYLELG F QAE DCSK I LDKK
Sbjct: 505 YSNRAAAYLELGRFHQAEADCSKAIDLDKK 534
>gi|115454865|ref|NP_001051033.1| Os03g0707900 [Oryza sativa Japonica Group]
gi|13937285|gb|AAK50116.1|AC087797_1 chloroplast protein-translocon-like protein [Oryza sativa Japonica
Group]
gi|108710681|gb|ABF98476.1| chloroplast outer membrane translocon subunit, putative, expressed
[Oryza sativa Japonica Group]
gi|108710682|gb|ABF98477.1| chloroplast outer membrane translocon subunit, putative, expressed
[Oryza sativa Japonica Group]
gi|113549504|dbj|BAF12947.1| Os03g0707900 [Oryza sativa Japonica Group]
gi|218193613|gb|EEC76040.1| hypothetical protein OsI_13214 [Oryza sativa Indica Group]
Length = 586
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 265/550 (48%), Positives = 363/550 (66%), Gaps = 19/550 (3%)
Query: 11 NTSNPKVWVVIGVSVVGFVVLAETLRRRRNPKLNGRVDFGAFLERFELIPFPQPPPPAAR 70
+++ +WV++G+ + G ++ A+ LRR P D GAF+ R EL+P PQPPPP AR
Sbjct: 3 SSTAANLWVLLGLGIAGVLLAAKRLRRPARP------DNGAFIARLELLPPPQPPPPQAR 56
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
PL GL FAI D F V GY+T FGS +W + H A +T++VV+ L+ GA C+GKTV+DE
Sbjct: 57 HPLTGLCFAIADAFHVTGYITSFGSLEWAKTHDAATQTSLVVSSLVDGGAMCVGKTVIDE 116
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
AF I GENKH+GTP NP P +PGG SSGSAVAVAA +VDF+LG DTIG VRVP S+C
Sbjct: 117 MAFSIHGENKHFGTPTNPAAPDRVPGGCSSGSAVAVAAGIVDFSLGIDTIGGVRVPGSYC 176
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIF 250
G+L +RPSH V GV+P + SLD +G AR+ S+L RVGH+LL+L + R+ R
Sbjct: 177 GVLAFRPSHAVVPNNGVIPVAPSLDAIGWFARDPSVLRRVGHLLLRLPYADIRQPRHFYI 236
Query: 251 ADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPEN 310
ADD F++SKV + V++K++E L G Q H+N+ Y+AS +PSL+ + ++
Sbjct: 237 ADDCFEMSKVHARRLTQVVTKSVEKLFGRQVLGHVNLENYLASRIPSLR--NNSNGHGDS 294
Query: 311 GTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGY----NVFERVLEAINTTQDNIKI 366
++L ALS M L ++EFK + EW+ S KP + N+ + IN +QD
Sbjct: 295 KFSSLLALSRAMQFLHKHEFKDQHMEWINSVKPAVDACIVGNLSDDGESTINNSQD---- 350
Query: 367 LYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGC 426
R E+RAAL LLKDD ILVIPTV P KLN ++ S +++ +T L+S+ SMSGC
Sbjct: 351 ---ARKEVRAALGALLKDDGILVIPTVLGCPPKLNARELSSQDYNVQTSCLTSLASMSGC 407
Query: 427 CQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNLVPLPDTNGSI 486
CQV +P+G +++ P+S+S I HGGD+FLLDT+ +Y ++QEQV+ + S
Sbjct: 408 CQVTVPLGTHDKCPVSVSLIARHGGDRFLLDTIQTIYATIQEQVDALAKSNVSSKQAMSE 467
Query: 487 DASELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQQAEEDC 546
+A+E KEKGN AFK KQW KA+N+Y+EAIKLN ATYYSNRAAA+LEL ++QAE DC
Sbjct: 468 EAAEAAKEKGNIAFKEKQWQKAINFYTEAIKLNNKVATYYSNRAAAFLELASYRQAEADC 527
Query: 547 SKTISLDKKV 556
+ I +D K+
Sbjct: 528 TSAIDIDPKI 537
>gi|222625649|gb|EEE59781.1| hypothetical protein OsJ_12287 [Oryza sativa Japonica Group]
Length = 586
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 264/550 (48%), Positives = 363/550 (66%), Gaps = 19/550 (3%)
Query: 11 NTSNPKVWVVIGVSVVGFVVLAETLRRRRNPKLNGRVDFGAFLERFELIPFPQPPPPAAR 70
+++ +WV++G+ + G ++ A+ LRR P + GAF+ R EL+P PQPPPP AR
Sbjct: 3 SSTAANLWVLLGLGIAGVLLAAKRLRRPARP------ENGAFIARLELLPPPQPPPPQAR 56
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
PL GL FAI D F V GY+T FGS +W + H A +T++VV+ L+ GA C+GKTV+DE
Sbjct: 57 NPLTGLCFAIADAFHVTGYITSFGSLEWAKTHDAATQTSLVVSSLVDGGAMCVGKTVIDE 116
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
AF I GENKH+GTP NP P +PGG SSGSAVAVAA +VDF+LG DTIG VRVP S+C
Sbjct: 117 MAFSIHGENKHFGTPTNPAAPDRVPGGCSSGSAVAVAAGIVDFSLGIDTIGGVRVPGSYC 176
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIF 250
G+L +RPSH V GV+P + SLD +G AR+ S+L RVGH+LL+L + R+ R
Sbjct: 177 GVLAFRPSHAVVPNNGVIPVAPSLDAIGWFARDPSVLRRVGHLLLRLPYADIRQPRHFYI 236
Query: 251 ADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPEN 310
ADD F++SKV + V++K++E L G Q H+N+ Y+AS +PSL+ + ++
Sbjct: 237 ADDCFEMSKVHARRLTQVVTKSVEKLFGRQVLGHVNLENYLASRIPSLR--NNSNGHGDS 294
Query: 311 GTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGY----NVFERVLEAINTTQDNIKI 366
++L ALS M L ++EFK + EW+ S KP + N+ + IN +QD
Sbjct: 295 KFSSLLALSRAMQFLHKHEFKDQHMEWINSVKPAVDACIVGNLSDDGESTINNSQD---- 350
Query: 367 LYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGC 426
R E+RAAL LLKDD ILVIPTV P KLN ++ S +++ +T L+S+ SMSGC
Sbjct: 351 ---ARKEVRAALGALLKDDGILVIPTVLGCPPKLNARELSSQDYNVQTSCLTSLASMSGC 407
Query: 427 CQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNLVPLPDTNGSI 486
CQV +P+G +++ P+S+S I HGGD+FLLDT+ +Y ++QEQV+ + S
Sbjct: 408 CQVTVPLGTHDKCPVSVSLIARHGGDRFLLDTIQTIYATIQEQVDALAKSNVSSKQAMSE 467
Query: 487 DASELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQQAEEDC 546
+A+E KEKGN AFK KQW KA+N+Y+EAIKLN ATYYSNRAAA+LEL ++QAE DC
Sbjct: 468 EAAEAAKEKGNIAFKEKQWQKAINFYTEAIKLNNKVATYYSNRAAAFLELASYRQAEADC 527
Query: 547 SKTISLDKKV 556
+ I +D K+
Sbjct: 528 TSAIDIDPKI 537
>gi|357521651|ref|XP_003631114.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Medicago truncatula]
gi|355525136|gb|AET05590.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Medicago truncatula]
Length = 594
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 269/548 (49%), Positives = 371/548 (67%), Gaps = 6/548 (1%)
Query: 8 IKTNTSNPKVWVVIGVSVVGFVVLAETLRRRRNPKLNGRVDFGAFLERFELIPFPQPPPP 67
+ ++ S+ +WV++G+ + G VL L++ + D GAF+++ +L+P P P PP
Sbjct: 4 MASSQSSNNLWVLLGLGLAGIYVLTRKLKQ------TVKEDLGAFIQKLQLLPPPPPAPP 57
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
A PL L FAI D+FD++G+V+ FG P+W R H A T+ V+ L+++GATCI TV
Sbjct: 58 KAPHPLTSLTFAISDLFDIEGHVSTFGHPEWARTHEPASSTSPAVSTLVQSGATCIATTV 117
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
LD ++GI+GENKH+GTP NP +P+ +PGGSSSG+AVAVAA VDF+LG DT G VRVPA
Sbjct: 118 LDNLSYGISGENKHFGTPSNPAIPARVPGGSSSGAAVAVAANFVDFSLGVDTSGGVRVPA 177
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
FCGILG+RPSHG VS G++P S SLDTVG A++ IL RVGH+LLQ V R R+
Sbjct: 178 GFCGILGFRPSHGAVSHGGIIPVSTSLDTVGWFAKDPDILRRVGHILLQAPFVMQRSPRQ 237
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
+I ADD FQ VP ++ V+ KA E L G Q +H+N+ YI S VPSLK Q +
Sbjct: 238 IIIADDCFQHLNVPLDRSSQVVIKATEKLFGKQVLKHINLEGYIRSKVPSLKACSGQKAN 297
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
E +++L L+++M LQR+EF +++EW+ KP L V ++ E + ++ ++
Sbjct: 298 GELKSSSLILLANIMQFLQRHEFGHMHDEWMSIVKPDLHPAVSAQLHEKFDVSEVEMENS 357
Query: 368 YKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCC 427
VR+EMR A+ LLKD+ ILVIPTV+DPP KL K+ S ++ R L SI S+SGCC
Sbjct: 358 KSVRSEMRVAVNSLLKDEGILVIPTVADPPPKLGGKEILSQDYQSRAFSLLSIASISGCC 417
Query: 428 QVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNLVPLPDTNGSID 487
QV +P+G Y+++P+S+S I +GGD+FLLDT+ +Y SLQEQ +IA+ +
Sbjct: 418 QVTVPLGFYDKYPVSVSLIARYGGDRFLLDTLKTMYTSLQEQADIAATSKASRNVVSKEQ 477
Query: 488 ASELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQQAEEDCS 547
++E+ KEKGN A+K KQW KA+ +Y+EAIKL G +ATYYSNRA AYLELG + QAE DC+
Sbjct: 478 SAEIAKEKGNQAYKDKQWQKAIGFYTEAIKLCGNNATYYSNRAQAYLELGSYLQAEADCT 537
Query: 548 KTISLDKK 555
K ISLDKK
Sbjct: 538 KAISLDKK 545
>gi|356524688|ref|XP_003530960.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like
[Glycine max]
Length = 591
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 271/517 (52%), Positives = 358/517 (69%)
Query: 39 RNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDW 98
R K + R D GAF+E+ +L+P PQP PP A PL L FA+ D+FD++G+V+ FG P+W
Sbjct: 25 RKLKKSVRKDLGAFIEKLQLLPPPQPAPPKAPHPLTALTFALSDLFDIEGHVSTFGHPEW 84
Query: 99 KRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGS 158
R H A TA V+ L++ GATC+ TVLD+ A GI GENKHYGTP NP +P+ +PGGS
Sbjct: 85 ARTHEPASSTAPAVSALVEGGATCVATTVLDDLALGIGGENKHYGTPTNPAVPARVPGGS 144
Query: 159 SSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVG 218
SSG+AVAVAA VDFALG DT+G VRVPA FCGILG+RPSHG VS +G++P S SLDTVG
Sbjct: 145 SSGAAVAVAADFVDFALGIDTVGGVRVPAGFCGILGFRPSHGAVSHLGIIPISTSLDTVG 204
Query: 219 LLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSG 278
A++ +IL RVGH+LLQ R R+++ ADD FQ VP ++ V+ K E L G
Sbjct: 205 WFAKDPNILRRVGHILLQAPFAMQRSPRQIVIADDCFQHINVPLDRSSQVVVKTTEKLFG 264
Query: 279 YQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWV 338
Q +H+N+G Y++S VPSLKG Q T+ E + LK L+++M SLQR+EF+ ++EW+
Sbjct: 265 RQVLKHINLGDYLSSRVPSLKGCSGQKTNGEVKASALKLLANIMQSLQRHEFRLKHDEWM 324
Query: 339 KSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPL 398
+ KP L V ++ E + I+ VR+EM AA+ LLKD+ ILVIPTV+DPP
Sbjct: 325 NTVKPELHPGVSAQLHEKFEVSDAEIENSKSVRSEMCAAVNSLLKDEGILVIPTVADPPP 384
Query: 399 KLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDT 458
KL K+ S ++ R L SI S+SGCCQV+IP+G Y+++P+S+S I HGGD+FLLDT
Sbjct: 385 KLGGKEILSEDYQSRAFSLLSIASISGCCQVSIPLGFYDKYPVSVSLIARHGGDRFLLDT 444
Query: 459 VLDLYDSLQEQVNIASNLVPLPDTNGSIDASELLKEKGNAAFKGKQWNKAVNYYSEAIKL 518
+ +Y +LQEQ +IAS + ++E+ KEKGN A+K KQW KA+ +Y+EAIKL
Sbjct: 445 LQTVYTTLQEQADIASKSKSSGNAVSKEQSAEIAKEKGNQAYKDKQWQKAIGFYTEAIKL 504
Query: 519 NGTSATYYSNRAAAYLELGCFQQAEEDCSKTISLDKK 555
G +ATYYSNRA AYL LG + QA EDC+K ISLDKK
Sbjct: 505 CGDNATYYSNRAQAYLGLGSYLQAVEDCTKAISLDKK 541
>gi|75336680|sp|Q9MUK5.1|TOC64_PEA RecName: Full=Translocon at the outer membrane of chloroplasts 64
gi|7453538|gb|AAF62870.1|AF179282_1 Toc64 [Pisum sativum]
Length = 593
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 272/540 (50%), Positives = 367/540 (67%), Gaps = 6/540 (1%)
Query: 16 KVWVVIGVSVVGFVVLAETLRRRRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAG 75
++WV++G+ + G VL L + + DFGAFL + +L+P P P PP A PL+
Sbjct: 10 QIWVILGLGLAGIYVLTRKLTQAV------KEDFGAFLLKLKLLPPPPPAPPKAPHPLSS 63
Query: 76 LKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGI 135
L FAI D+FD++G+V+ FG P+W R H A TA V+ L+++GATCIG TV+DE A+GI
Sbjct: 64 LNFAISDIFDIEGHVSTFGHPEWARTHEPASSTASAVSALVESGATCIGTTVVDELAYGI 123
Query: 136 TGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGY 195
+GENKH+GTP NP +P+ +PGGSSSG+AVAVAA VDF+LG DT G VRVPA FCGILG+
Sbjct: 124 SGENKHFGTPTNPAVPNRVPGGSSSGAAVAVAANFVDFSLGVDTSGGVRVPAGFCGILGF 183
Query: 196 RPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIF 255
RPSHG VS +G++P S SLDTVG A++ +L RVGH+LLQ V R R++I ADD F
Sbjct: 184 RPSHGAVSHVGIIPVSTSLDTVGWFAKDPDVLRRVGHILLQAPFVMQRNPRQIIIADDCF 243
Query: 256 QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTATL 315
Q VP +T V+ KA E L G Q +H+N YI+S V SLK Q ++ +++L
Sbjct: 244 QHLNVPLDRTSQVVIKATEKLFGKQVLKHINFEDYISSKVSSLKACSIQKSNGVLKSSSL 303
Query: 316 KALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNEMR 375
K L++VM SLQR+EF+ + EW+ KP L V ++ E ++ I+ VR+E+R
Sbjct: 304 KLLANVMQSLQRHEFEHTHSEWMSIVKPDLHPAVSAQLHEKFEVSELEIENSKSVRSELR 363
Query: 376 AALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGK 435
A+ LLKD+ +LVIPTV+DPP KL K+ S ++ R L L SI S+SGCCQV +P+G
Sbjct: 364 VAVNSLLKDEGVLVIPTVADPPPKLGGKEFLSHDYQSRALSLLSIASISGCCQVTVPLGF 423
Query: 436 YNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNLVPLPDTNGSIDASELLKEK 495
++++P+S+S I HGGD+FLLDT+ +Y LQEQ +IA+ ++E+ KEK
Sbjct: 424 FDKNPVSVSLIARHGGDRFLLDTLKTMYTVLQEQADIAAPSKSSKSVVSKEQSAEISKEK 483
Query: 496 GNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQQAEEDCSKTISLDKK 555
GN A+K KQW KA+ +Y+EAIKL G +ATYYSNRA AYLELG + QAEEDC+ IS DKK
Sbjct: 484 GNQAYKDKQWQKAIGFYTEAIKLCGNNATYYSNRAQAYLELGSYLQAEEDCTTAISFDKK 543
>gi|302811504|ref|XP_002987441.1| hypothetical protein SELMODRAFT_42040 [Selaginella moellendorffii]
gi|300144847|gb|EFJ11528.1| hypothetical protein SELMODRAFT_42040 [Selaginella moellendorffii]
Length = 593
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 258/552 (46%), Positives = 359/552 (65%), Gaps = 36/552 (6%)
Query: 19 VVIGVSVVGFVVLAETLRRRRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKF 78
V++G+ + G ++ + RR+R R GAF++ EL P P PPPP A PLAGL F
Sbjct: 1 VLVGIGIAGLLIFS---RRQRK---GVRAGNGAFIQYLELNPPPAPPPPRAPPPLAGLTF 54
Query: 79 AIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGE 138
A+KD+FD++G++TGFG+PDW + H A +TA VV LL++ GA CIGKT +DE A+ I GE
Sbjct: 55 AVKDIFDIEGFITGFGNPDWLKTHGPATQTAFVVQLLVRAGAACIGKTHMDELAYSINGE 114
Query: 139 NKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPS 198
NKHYGTP+NP P+ +PGGSSSGSAVAVAA LVDFALGTDT G VRVPA+FCGI+G+RPS
Sbjct: 115 NKHYGTPINPASPNRVPGGSSSGSAVAVAAGLVDFALGTDTGGSVRVPAAFCGIIGFRPS 174
Query: 199 HGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIFQLS 258
HGT+S GV+P +QS DTVG A+ ++L +VG+ LLQ +EPR+ +R+I ADD F LS
Sbjct: 175 HGTISTSGVIPMAQSFDTVGWFAKEPNVLRQVGYALLQQPFMEPRQPQRVIMADDCFSLS 234
Query: 259 KVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTATLKAL 318
P +T V+++ E + G + +M++G Y+ S PSL Q+ E ++ L L
Sbjct: 235 SAPPERTKAVVARCFERVLGKKTMSNMDIGPYLLSKSPSL-----QAFCDETASSPLVGL 289
Query: 319 SSVMLSLQRY---------------EFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDN 363
S + +QRY EFKT +E W+ P LG + ERV A+ TT +
Sbjct: 290 SKALSLIQRYCFLATASFIACHLRFEFKTNHEAWLSGVNPDLGPGILERVRAALKTTAEE 349
Query: 364 IKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSM 423
I + V+ E+ L+DD +LV+PT PP KLNTK ++ ++ L +I M
Sbjct: 350 IVLAMSVKAEVA------LQDDVLLVLPTTPGPPPKLNTKGKALDDYREKAFALLAIAGM 403
Query: 424 SGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNLVPLPDTN 483
SGCCQV++P+G +++ P++ S + GGD+FLLD VL L+ ++E + ++ LP N
Sbjct: 404 SGCCQVSMPVGTFDDAPLAFSVMARQGGDRFLLDAVLALHVMVKEDLKNSA----LPLVN 459
Query: 484 GSIDASELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQQAE 543
+A+E KEKGN AFK K ++KAV++YSEAI+L+ ++TYY+NRA A+L + F Q E
Sbjct: 460 AKTNAAEAAKEKGNLAFKNKDYHKAVSHYSEAIRLDPLNSTYYNNRAVAHLSMCSFLQVE 519
Query: 544 EDCSKTISLDKK 555
EDCSK I LDKK
Sbjct: 520 EDCSKAIDLDKK 531
>gi|224285989|gb|ACN40706.1| unknown [Picea sitchensis]
Length = 458
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 248/463 (53%), Positives = 330/463 (71%), Gaps = 8/463 (1%)
Query: 13 SNPKVWVVIGVSVVGFVVLAETLRRRRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQP 72
S K+ V++G+ + G + + RRR ++ + DFGAF ER +L+P PQP PP + P
Sbjct: 2 SATKICVLLGLGLAGIFLAS----RRRKKEI--KEDFGAFTERIQLLPPPQPSPPESPYP 55
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L GL FAIK++FD++GYVTGFG+PDW++ H A +TA VVT +++ GATC+G+TV+DE A
Sbjct: 56 LTGLTFAIKEIFDIEGYVTGFGNPDWQQTHEPAAQTAPVVTFVVQGGATCVGRTVMDEMA 115
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+ I GENKHYGTP NP PS IPGGSSSGSAVAVAA+LVDFALGTDT G VRVPASFCGI
Sbjct: 116 YSINGENKHYGTPTNPAAPSRIPGGSSSGSAVAVAAELVDFALGTDTGGSVRVPASFCGI 175
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
LG+RPSHG VS +GV+P +QS DTVGL R+ +IL VGH+LLQL +E R+ R +I AD
Sbjct: 176 LGFRPSHGAVSTVGVVPMAQSFDTVGLFTRDPNILRHVGHILLQLPFMEYRQPRGIIIAD 235
Query: 253 DIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLR--AQSTSPEN 310
D FQL+K+P +T++V++++ E L G Q H+++G+YIA+ VPSLK + +S E
Sbjct: 236 DCFQLTKIPNDQTVNVVTRSTEKLFGRQVLNHISLGEYIATEVPSLKYFQNEEESRDGEC 295
Query: 311 GTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKV 370
G + LKAL S + LQRYEFK +EEW+ S KP LG + RV A+ T +NI+ K
Sbjct: 296 GISALKALCSALRLLQRYEFKMNHEEWINSVKPDLGPGISGRVRAALETNNENIEHCLKA 355
Query: 371 RNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVA 430
++E R A+ LLKDD IL+IPT P KLN K+ EF R L I MSGCCQV+
Sbjct: 356 KDEAREAVNSLLKDDAILIIPTTPGPAPKLNMKEMLLEEFRIRAFTLLCISGMSGCCQVS 415
Query: 431 IPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIA 473
IP+G++++ P+++S + HGGD+FLLDTV +Y +LQE+V IA
Sbjct: 416 IPVGQHDKCPLAVSMMARHGGDRFLLDTVRAMYPTLQEEVKIA 458
>gi|30684733|ref|NP_188424.2| translocon at the outer membrane of chloroplasts 64-III
[Arabidopsis thaliana]
gi|75335547|sp|Q9LVH5.1|OE64C_ARATH RecName: Full=Outer envelope protein 64, chloroplastic; AltName:
Full=Translocon at the outer membrane of chloroplasts
64-III
gi|9294499|dbj|BAB02718.1| unnamed protein product [Arabidopsis thaliana]
gi|332642509|gb|AEE76030.1| translocon at the outer membrane of chloroplasts 64-III
[Arabidopsis thaliana]
Length = 589
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 262/510 (51%), Positives = 343/510 (67%)
Query: 46 RVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEA 105
R DFGAF+++ L+P PQP PP A PL GL FA+ DVFD+ GYVTGFG PDW R H A
Sbjct: 31 REDFGAFIDKLMLLPPPQPAPPKAPHPLTGLTFAVSDVFDITGYVTGFGHPDWVRTHEAA 90
Query: 106 ERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVA 165
T+ VV+ L++ GATC+GKTV+DEFAF I+GENKHY +P NP P+ IPGG+ SG+AVA
Sbjct: 91 SSTSPVVSTLVEGGATCVGKTVVDEFAFSISGENKHYDSPTNPAAPTRIPGGACSGAAVA 150
Query: 166 VAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNAS 225
VA VDFALG DT+G VRVPA +CG+LG++ S+G +S G++P S SLD+VG AR+ +
Sbjct: 151 VATNAVDFALGIDTVGGVRVPAGYCGVLGFKSSYGAISNTGIIPVSSSLDSVGWFARDPN 210
Query: 226 ILHRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHM 285
L RVGHVLLQL R R++I ADD FQL K+P + V++K+ E L G Q +H
Sbjct: 211 TLRRVGHVLLQLPFATQRNPRQIILADDCFQLLKIPVDRITQVVTKSAEKLFGRQLLKHQ 270
Query: 286 NVGQYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRL 345
N+ Y + VPSLK +T + L++VM LQR+EF + +W+ + KP +
Sbjct: 271 NLETYFETKVPSLKEFARTKAIANTKVSTSRLLANVMQLLQRHEFLQNHGDWINTVKPAI 330
Query: 346 GYNVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKT 405
+ +V E T + + L +RNE R A+ LLKDD ILVIPT+ P KL +K+
Sbjct: 331 DPVILSQVCENPELTNEETENLNAIRNETRVAIGSLLKDDGILVIPTLPAVPPKLGSKEI 390
Query: 406 YSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDS 465
S ++ +R L SI S+SGCCQV +P+G + + PIS+SFI HGGD+FLLDTV +Y S
Sbjct: 391 TSEDYQNRASSLLSIASISGCCQVTVPLGHHEKCPISVSFIGRHGGDRFLLDTVQTMYPS 450
Query: 466 LQEQVNIASNLVPLPDTNGSIDASELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATY 525
LQE +I ++ +++E+ KEKGN AFK K W KA+ YSEAIKL+ +ATY
Sbjct: 451 LQEYSSIVTDPKSSKKAITKEESAEIAKEKGNQAFKEKLWQKAIGLYSEAIKLSDNNATY 510
Query: 526 YSNRAAAYLELGCFQQAEEDCSKTISLDKK 555
YSNRAAAYLELG F QAEEDC+K I+LDKK
Sbjct: 511 YSNRAAAYLELGGFLQAEEDCTKAITLDKK 540
>gi|357117973|ref|XP_003560735.1| PREDICTED: uncharacterized protein LOC100846161 [Brachypodium
distachyon]
Length = 588
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 260/552 (47%), Positives = 358/552 (64%), Gaps = 21/552 (3%)
Query: 11 NTSNPKVWVVIGVSVVGFVVLAETLRRRRNPKLNGRVDFGAFLERFELIPFPQPPPPAAR 70
+++ +WV++G+ + G ++ A+ LRR P D GAF+ R EL+P PQPPPP AR
Sbjct: 3 SSTAANLWVLLGLGIAGVLLAAKRLRRPARP------DSGAFISRLELLPPPQPPPPQAR 56
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
PL L FA+ D F + Y+T FGS +W + H A +T++VV+ L+ GA C+GKTV+DE
Sbjct: 57 HPLTDLCFAVADAFHISSYITSFGSLEWAKTHDAATQTSLVVSSLVDGGAICVGKTVIDE 116
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
A+ I GENKH+GTP NP +PGG SSGSAVAVAA +VDFALG D++G VRVP +C
Sbjct: 117 MAYSIHGENKHFGTPRNPAASDRVPGGCSSGSAVAVAAGMVDFALGIDSVGGVRVPGGYC 176
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIF 250
G+L +RPSH + GV+P + SLDT+G AR+ +L RVGH+LL+L+ E R R
Sbjct: 177 GVLAFRPSHAVIPNSGVIPVAPSLDTIGWFARDPIVLRRVGHLLLRLSYTEIRLPRNFYI 236
Query: 251 ADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPEN 310
ADD F+LSK+P + V++K+ E L G Q H+N+G Y+AS +PSL+ + ++
Sbjct: 237 ADDCFELSKIPARRLTQVVTKSAEKLYGRQVLSHVNLGNYLASRMPSLRNYSNGQKNGDS 296
Query: 311 GTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKV 370
+ +L ALSS M L ++EF+ + EW+ S K + + + + +T I + V
Sbjct: 297 KSCSLLALSSAMQLLHKHEFRDQHNEWINSVKSAVDACIVGNLSDNGAST---IDLCQDV 353
Query: 371 RNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVA 430
R E R+AL LLKDD ILVIPT P K+N+++ SA ++ TL LSS+ SMSGCCQV
Sbjct: 354 RKEARSALNALLKDDGILVIPTALGCPPKVNSRELSSASYNAETLCLSSLSSMSGCCQVT 413
Query: 431 IPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNLVPLPDTNGSIDASE 490
IP+G +++ PIS+SFI HGGD+FLLDT +Y ++QEQV I L +N S +
Sbjct: 414 IPVGTHDKCPISVSFIARHGGDRFLLDTTQAMYGTIQEQVEI------LATSNASSKQAM 467
Query: 491 L------LKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQQAEE 544
+ KEKGN AFK KQW KA+N Y+EAIKLN ATYYSNRAAA+LEL ++QAE
Sbjct: 468 IEEAAEAAKEKGNIAFKEKQWQKAINLYTEAIKLNDKVATYYSNRAAAFLELASYRQAET 527
Query: 545 DCSKTISLDKKV 556
DC+ I +D K+
Sbjct: 528 DCTSAIDIDPKI 539
>gi|226493135|ref|NP_001152345.1| LOC100285985 [Zea mays]
gi|195655363|gb|ACG47149.1| toc64 [Zea mays]
Length = 588
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 259/539 (48%), Positives = 350/539 (64%), Gaps = 10/539 (1%)
Query: 17 VWVVIGVSVVGFVVLAETLRRRRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGL 76
+WV++G+ + G ++ A LRR D GAF+ R EL+P PQPPPP A PL GL
Sbjct: 10 LWVLLGLGIAGVLLAARRLRRPAR------PDHGAFVARLELLPPPQPPPPQAPHPLTGL 63
Query: 77 KFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGIT 136
FAI D V GY+T FGS +W + H+ T+ VV+ L+ GA C+GKTV+DE A+ I
Sbjct: 64 CFAIADALHVSGYITSFGSLEWAKTHNAEVLTSSVVSALVDGGAICVGKTVIDEMAYSIH 123
Query: 137 GENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYR 196
GEN+++ TP NP P +PGG SSGSAVAVA +VDFALG D+IG VR+P ++CG+L +R
Sbjct: 124 GENRYFDTPTNPAAPDRVPGGCSSGSAVAVAGGMVDFALGIDSIGGVRIPGAYCGVLAFR 183
Query: 197 PSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIFQ 256
PSH VS GV+P + SLDT+G A++ S+LHRVGH+LL+L R+ R ADD F+
Sbjct: 184 PSHAVVSNSGVIPVAPSLDTIGWFAKDPSVLHRVGHLLLRLPYAGIRQPRIFYIADDCFE 243
Query: 257 LSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTATLK 316
LSK+P + V++K++E L G Q H+N+ Y++S + SL + ++ L
Sbjct: 244 LSKIPARRLTQVVTKSVEKLFGRQ-VRHVNLENYLSSRISSLGNYSNGHKNGDSKFPLLL 302
Query: 317 ALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNEMRA 376
AL + M+SL + EFK + EW+ S KP + + + E ++ D + VR E R+
Sbjct: 303 ALCNSMISLHKQEFKDKHMEWINSVKPAVDARIVSDLSEDGDSDIDGCQ---NVRKEARS 359
Query: 377 ALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKY 436
AL LLKDD ILVIPT P KLN K+ S ++ +TL L S+ SMSGCCQV+IP+G +
Sbjct: 360 ALSGLLKDDGILVIPTALGCPPKLNAKELSSESYNSQTLRLLSLASMSGCCQVSIPLGTH 419
Query: 437 NEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNLVPLPDTNGSIDASELLKEKG 496
++ PIS+S I HGGD+FLLDT +Y ++QEQV I + + +A+E KEKG
Sbjct: 420 DKCPISVSLIARHGGDRFLLDTTQTMYTTIQEQVEILAKSSVSSKQAMNEEAAEAAKEKG 479
Query: 497 NAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQQAEEDCSKTISLDKK 555
NAAFK KQW KAVN+Y+EAIKLNG ATYYSNRAAA+LEL ++QAE DC+ I LD K
Sbjct: 480 NAAFKEKQWQKAVNFYTEAIKLNGKVATYYSNRAAAFLELTSYRQAEADCTSAIELDSK 538
>gi|242033249|ref|XP_002464019.1| hypothetical protein SORBIDRAFT_01g010650 [Sorghum bicolor]
gi|241917873|gb|EER91017.1| hypothetical protein SORBIDRAFT_01g010650 [Sorghum bicolor]
Length = 588
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 264/542 (48%), Positives = 349/542 (64%), Gaps = 16/542 (2%)
Query: 17 VWVVIGVSVVGFVVLAETLRRRRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGL 76
+WV++G+ + G + A LRR D GAF+ R EL+P PQPPPP A PL GL
Sbjct: 10 LWVLLGLGIAGVFLAARRLRRPAR------PDHGAFIARLELLPPPQPPPPQAPHPLTGL 63
Query: 77 KFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGIT 136
FAI D V GY+T FGS +W + H +T+ VV+ L+ +GA C+GKTV+DE A+ I
Sbjct: 64 CFAIADALHVSGYITSFGSLEWAKTHDAEVQTSPVVSALVDSGAICVGKTVIDEMAYSIH 123
Query: 137 GENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYR 196
GENK++ TP NP P +PGG SSGSAVAVA +VDFALG D+IG VRVP ++CG+L +R
Sbjct: 124 GENKYFDTPTNPATPDRVPGGCSSGSAVAVAGGMVDFALGIDSIGGVRVPGAYCGVLAFR 183
Query: 197 PSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIFQ 256
PSH VS GV+P + SLDT+G AR+ S+LHRVGH+LL+L R+ R ADD F
Sbjct: 184 PSHAVVSSSGVIPVAPSLDTIGWFARDPSVLHRVGHLLLRLPYAGIRQPRNFYIADDCFG 243
Query: 257 LSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTAT-- 314
LSK+P + V++K++E L G Q H+N+ Y++S + GL S +NG +
Sbjct: 244 LSKIPVRRLTQVVTKSVEKLFGRQ-VRHVNLENYLSSRI---SGLSNYSNGHKNGDSKFP 299
Query: 315 -LKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNE 373
L AL + M SL + EFK + EW+ S KP + + + E ++ D + R E
Sbjct: 300 LLLALCNAMRSLHKREFKDQHMEWINSVKPAVDARIVSDLSEDGDSDIDGCQ---DARKE 356
Query: 374 MRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPI 433
R+AL LLKDD ILVIPT P KLN K+ S ++ +TL L S+ SMSGCCQV+IP+
Sbjct: 357 ARSALSELLKDDGILVIPTALGCPPKLNAKELSSESYNSQTLGLLSLASMSGCCQVSIPL 416
Query: 434 GKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNLVPLPDTNGSIDASELLK 493
G +++ PIS+S I HGGD+FLLDT +Y ++QEQV I + + +A+E K
Sbjct: 417 GTHDKCPISVSLIARHGGDRFLLDTTQTMYTTIQEQVEILAKSSVSSKQAMNEEAAEAAK 476
Query: 494 EKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQQAEEDCSKTISLD 553
EKGNAAFK KQW KAVN+Y+EAIKLNG ATYYSNRAAA+LEL ++QAE DC+ I LD
Sbjct: 477 EKGNAAFKEKQWQKAVNFYTEAIKLNGKVATYYSNRAAAFLELTSYRQAEADCTSAIDLD 536
Query: 554 KK 555
K
Sbjct: 537 PK 538
>gi|147801313|emb|CAN77023.1| hypothetical protein VITISV_015334 [Vitis vinifera]
Length = 433
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/427 (51%), Positives = 281/427 (65%), Gaps = 5/427 (1%)
Query: 48 DFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAER 107
D+GAF+ERF L QP + PL GL FA+KD+FDV GYVTGFG+PDW R H A
Sbjct: 6 DYGAFMERFIL----QPSSSSHELPLNGLTFAVKDIFDVDGYVTGFGNPDWARTHQAAML 61
Query: 108 TAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVA 167
TA V +LK GATC+GKTV+DE A+ I GENKHYGTP NPQ P +PGGSSSGSAVAV
Sbjct: 62 TAPSVLAVLKGGATCVGKTVMDEMAYSINGENKHYGTPTNPQAPDRVPGGSSSGSAVAVG 121
Query: 168 AQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASIL 227
A LVDF+LGTDT G VRVPAS+CGI G RPSHG VS GV+P +QS DTVG AR+ IL
Sbjct: 122 AMLVDFSLGTDTGGSVRVPASYCGIFGIRPSHGVVSTTGVIPMAQSFDTVGWFARDPEIL 181
Query: 228 HRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNV 287
+RVGHVLL V P + ++I +D F+L +P + V+ K++E L G +H+++
Sbjct: 182 NRVGHVLLPFPDVNPVKPSQIIIPEDCFRLLSIPIDRVTQVLIKSVEKLFGSDIVKHVSL 241
Query: 288 GQYIASNVPSLKGLRA-QSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLG 346
G Y+ V SLK + ++ + E +L ALS+ M LQRYEFK + EWV++ +P LG
Sbjct: 242 GDYVEDKVTSLKPFMSKENQTQEYNIPSLAALSTAMRLLQRYEFKNNHGEWVRAVQPDLG 301
Query: 347 YNVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTY 406
+ ERV EA+ TT + I + ++ E R+AL LL D +LV+PTV PP KL T T
Sbjct: 302 PGIRERVWEALGTTDEKIDVCQSLKTEFRSALTDLLGDSGVLVLPTVPGPPPKLQTDPTT 361
Query: 407 SAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSL 466
F R L SI +SG CQV+IP+G Y+ P+++S + HG D FLL+ V LY S+
Sbjct: 362 LESFRARAFSLLSIAGVSGFCQVSIPLGLYDNLPVAVSLLAKHGSDGFLLNLVQTLYGSI 421
Query: 467 QEQVNIA 473
+EQV +A
Sbjct: 422 KEQVEVA 428
>gi|359487733|ref|XP_002284823.2| PREDICTED: amidase 1-like [Vitis vinifera]
gi|296088312|emb|CBI36757.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/427 (50%), Positives = 280/427 (65%), Gaps = 5/427 (1%)
Query: 48 DFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAER 107
++GAF+ERF L QP + PL GL FA+KD+FDV GYVTGFG+PDW R H A
Sbjct: 6 NYGAFMERFIL----QPSSSSHELPLNGLTFAVKDIFDVDGYVTGFGNPDWARTHQAAML 61
Query: 108 TAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVA 167
TA V +LK GATC+GKTV+DE A+ I GENKHYGTP NPQ P +PGGSSSGSAVAV
Sbjct: 62 TAPSVLAVLKGGATCVGKTVMDEMAYSINGENKHYGTPTNPQAPDRVPGGSSSGSAVAVG 121
Query: 168 AQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASIL 227
A LVDF+LGTDT G VRVPAS+CGI G RPSHG VS GV+P +QS DTVG AR+ IL
Sbjct: 122 AMLVDFSLGTDTGGSVRVPASYCGIFGIRPSHGVVSTTGVIPMAQSFDTVGWFARDPEIL 181
Query: 228 HRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNV 287
+RVGHVLL V P + ++I +D F+L +P + V+ K++E L G +H+++
Sbjct: 182 NRVGHVLLPFPDVNPVKPSQIIIPEDCFRLLSIPIDRVTQVLIKSVEKLFGSDIVKHVSL 241
Query: 288 GQYIASNVPSLKG-LRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLG 346
G Y+ V SLK + ++ + E +L ALS+ M LQRYEFK + EWV+ +P LG
Sbjct: 242 GDYVEDKVTSLKPFMSKENQTQEYNIPSLAALSTAMRLLQRYEFKNNHGEWVREVQPDLG 301
Query: 347 YNVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTY 406
+ ERV EA+ TT + I + ++ E R+AL LL D +LV+PTV PP KL T T
Sbjct: 302 PGIRERVWEALGTTDEKIDVCQSLKTEFRSALTDLLGDSGVLVLPTVPGPPPKLQTDPTT 361
Query: 407 SAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSL 466
F R L SI +SG CQV+IP+G Y+ P+++S + HG D FLL+ V LY S+
Sbjct: 362 LESFRARAFSLLSIAGVSGFCQVSIPLGLYDNLPVAVSLLAKHGSDGFLLNLVQTLYGSI 421
Query: 467 QEQVNIA 473
+EQV +A
Sbjct: 422 KEQVEVA 428
>gi|255542602|ref|XP_002512364.1| amidase, putative [Ricinus communis]
gi|223548325|gb|EEF49816.1| amidase, putative [Ricinus communis]
Length = 500
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/440 (49%), Positives = 288/440 (65%), Gaps = 5/440 (1%)
Query: 32 AETLRRRRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVT 91
A++L R + D+GAF+E+F L +P + + PL L FA+KD+FDV GYVT
Sbjct: 62 AQSLTVRAVTDMAISPDYGAFMEKFVL----KPSSSSDQLPLHSLTFAVKDIFDVDGYVT 117
Query: 92 GFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMP 151
GFG+PDW R H A TA V +L+ GATC+GK ++DE A+ I GEN HYGTP NP P
Sbjct: 118 GFGNPDWARTHSAATATAPAVLAVLRGGATCVGKVIMDEMAYSINGENAHYGTPTNPSAP 177
Query: 152 SHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNS 211
+PGGSSSGSAVAV A+LVDF+LG+DT G VRVPAS+CGILG+RPSHG VS+ GV+P +
Sbjct: 178 DRVPGGSSSGSAVAVGAKLVDFSLGSDTGGSVRVPASYCGILGFRPSHGVVSVSGVIPMA 237
Query: 212 QSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISK 271
QS DTVG +RN IL VG +LLQL V+ + ++ A+D FQLS +PK + V+ K
Sbjct: 238 QSFDTVGWFSRNPVILKHVGRLLLQLPDVDRTKPNQIFIAEDCFQLSSIPKKRVSQVLVK 297
Query: 272 AIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQST-SPENGTATLKALSSVMLSLQRYEF 330
++E L G +H+N+G Y+ VPSL+ ++ E A L ALSS M LQRYEF
Sbjct: 298 SVEKLFGGDIVKHVNLGDYVEDKVPSLRHFMSKEIKEQEYNIAPLAALSSAMRMLQRYEF 357
Query: 331 KTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVI 390
KT + EWV + KP G + ER+ EA+ +T++NI VR E+RAAL LL++ I+ I
Sbjct: 358 KTNHGEWVTTVKPDFGPGLKERIWEAVRSTEENIDAFQSVRTELRAALTNLLEEFGIIAI 417
Query: 391 PTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHG 450
PTV P KLNT T F + L SI +SG CQV+IP+G ++ P+SIS + HG
Sbjct: 418 PTVPGVPPKLNTDPTTLEIFRAKAFSLLSITGVSGFCQVSIPLGMHDGLPVSISLLAKHG 477
Query: 451 GDKFLLDTVLDLYDSLQEQV 470
D FLL+ V LYD+LQE+V
Sbjct: 478 SDVFLLNVVETLYDTLQEEV 497
>gi|356576771|ref|XP_003556503.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like
[Glycine max]
Length = 433
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/424 (51%), Positives = 276/424 (65%), Gaps = 7/424 (1%)
Query: 48 DFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAER 107
D+GAF+E+F L PP A PL L FA+K++FDV+GYVTGFG+PDW R H A
Sbjct: 6 DYGAFMEKFTL-----PPNSAPSLPLNSLTFAVKEIFDVEGYVTGFGNPDWARTHTVATS 60
Query: 108 TAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVA 167
TA V LL+ GATC+GKTV+DE A+ I GEN HYGTP NP P +PGGSSSGSAVAV
Sbjct: 61 TAPTVLALLRAGATCVGKTVMDEMAYSINGENIHYGTPRNPCAPDRVPGGSSSGSAVAVG 120
Query: 168 AQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASIL 227
A+LVDF+LGTDT G VRVPAS+CGI G+RPSHG +S GV+P SQS DTVG AR+ IL
Sbjct: 121 AELVDFSLGTDTGGSVRVPASYCGIFGFRPSHGAISESGVIPMSQSFDTVGWFARDPMIL 180
Query: 228 HRVGHVLLQLNAVEPR-RARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMN 286
RVG V+LQL V P R +I A+D FQLS P + +A+E L G +H
Sbjct: 181 SRVGGVILQLPDVAPPIRPTCIIIAEDCFQLSSTPFDVVTGTVIQAVEKLYGGDVLKHEI 240
Query: 287 VGQYIASNVPSLKGLRAQSTSPE-NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRL 345
+G Y+ +NVPSLK ++ + + +L ALSS M LQRYEFK + EW+ + KP L
Sbjct: 241 LGDYVKTNVPSLKHFMSKENTDQIYSIPSLAALSSAMRLLQRYEFKNNHGEWISAVKPDL 300
Query: 346 GYNVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKT 405
G + ERV +A+ TT +NI I Y ++ E+ AL LL D L+IPTV PP KL T +
Sbjct: 301 GPGISERVSDALRTTGENIDICYSIKKELHDALAALLGDFGALMIPTVPGPPPKLQTNTS 360
Query: 406 YSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDS 465
F R L SI +SG CQV+IP+G YN P+SIS + HG D+FLL V LYDS
Sbjct: 361 DLEIFRARAFSLLSIAGVSGFCQVSIPLGMYNNLPLSISLVARHGADRFLLHLVESLYDS 420
Query: 466 LQEQ 469
++++
Sbjct: 421 IKDR 424
>gi|449435683|ref|XP_004135624.1| PREDICTED: amidase 1-like [Cucumis sativus]
Length = 428
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/423 (48%), Positives = 283/423 (66%), Gaps = 5/423 (1%)
Query: 49 FGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERT 108
+GAF+E+F L QP P+ + PL GL FA+KD+FD+ G+VTGFG+P+W R H A T
Sbjct: 6 YGAFMEKFLL----QPSSPSDQLPLTGLTFAVKDIFDMDGHVTGFGNPEWLRTHPPANHT 61
Query: 109 AVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAA 168
A V+ +L+ GATCIG+T++DE A+ I GEN HYGTP NP +PGGSSSGSAVAV A
Sbjct: 62 APTVSTILRGGATCIGRTIMDEMAYSINGENFHYGTPQNPCASDRVPGGSSSGSAVAVGA 121
Query: 169 QLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILH 228
LVDF+LGTDT G VRVPAS+CGILG+RPSHG VS GV+P +QS+DTVG AR+ +L
Sbjct: 122 NLVDFSLGTDTGGSVRVPASYCGILGFRPSHGAVSTSGVVPMAQSMDTVGWFARDPVVLK 181
Query: 229 RVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVG 288
+VG +LLQ VE ++ R+++ A+D F+LS +P + +++ L G + +++G
Sbjct: 182 KVGWLLLQQPEVEHQKPRQVLIAEDCFKLSSIPSERLTQAFVNSVKKLFGGHPIKEVSLG 241
Query: 289 QYIASNVPSLKGLRAQSTSP-ENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGY 347
Y+ VPSLK + + E+ +L AL+ + LQRYEFK +EEWV++ P LG
Sbjct: 242 NYVEEKVPSLKHFMIEGNAGNEHSIPSLAALARSLQLLQRYEFKINHEEWVRTYNPHLGP 301
Query: 348 NVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYS 407
+ ERV EA+ T +NI + + +R E+R AL LL+D +L IPTV PP KLNT +
Sbjct: 302 GISERVSEAMRATDENIDLCHSIRIELRKALAALLEDFGVLAIPTVPGPPPKLNTDVSEL 361
Query: 408 AEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
+F + L SI +SG CQV+IP+G YN P+SIS + HG D FLL+ V LY++L+
Sbjct: 362 QDFRAKAFSLLSIAGVSGFCQVSIPLGLYNGLPVSISLVANHGSDGFLLNVVHSLYNTLE 421
Query: 468 EQV 470
E+V
Sbjct: 422 EEV 424
>gi|449518011|ref|XP_004166037.1| PREDICTED: amidase 1-like [Cucumis sativus]
Length = 428
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/423 (48%), Positives = 283/423 (66%), Gaps = 5/423 (1%)
Query: 49 FGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERT 108
+GAF+E+F L QP P+ + PL GL FA+KD+FD+ G+VTGFG+P+W R H A T
Sbjct: 6 YGAFMEKFLL----QPSSPSDQLPLTGLTFAVKDIFDMDGHVTGFGNPEWLRTHPPANHT 61
Query: 109 AVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAA 168
A V+ +L+ GATCIG+T++DE A+ I GEN HYGTP NP +PGGSSSGSAVAV A
Sbjct: 62 APTVSTILRGGATCIGRTIMDEMAYSINGENFHYGTPQNPCASDRVPGGSSSGSAVAVGA 121
Query: 169 QLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILH 228
LVDF+LGTDT G VRVPAS+CGILG+RPSHG VS GV+P +QS+DTVG AR+ +L
Sbjct: 122 NLVDFSLGTDTGGSVRVPASYCGILGFRPSHGAVSTSGVVPMAQSMDTVGWFARDPVVLK 181
Query: 229 RVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVG 288
+VG +LLQ VE ++ R+++ A+D F+LS +P + +++ L G + +++G
Sbjct: 182 KVGWLLLQQPEVEHQKPRQVLIAEDCFKLSSIPSERLTQAFVNSVKKLFGGHPIKEVSLG 241
Query: 289 QYIASNVPSLKGLRAQSTSP-ENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGY 347
Y+ VPSLK + + E+ +L AL+ + LQRYEFK +EEWV++ P LG
Sbjct: 242 NYVEEKVPSLKHFMIEGNAGNEHSIPSLAALARSLQLLQRYEFKINHEEWVRTYNPHLGP 301
Query: 348 NVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYS 407
+ ERV EA+ T +NI + + +R E+R AL LL+D +L IPTV PP KLNT +
Sbjct: 302 GISERVSEAMRATDENIDLCHSIRIELRKALAALLEDFGVLAIPTVPGPPPKLNTDVSEL 361
Query: 408 AEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
+F + L SI +SG CQV+IP+G YN P+SIS + HG D FLL+ V LY++L+
Sbjct: 362 QDFRAKAFSLLSIAGVSGFCQVSIPLGLYNGLPVSISLVANHGSDGFLLNVVHSLYNTLE 421
Query: 468 EQV 470
E++
Sbjct: 422 EEI 424
>gi|356535097|ref|XP_003536085.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like
[Glycine max]
Length = 433
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/424 (51%), Positives = 273/424 (64%), Gaps = 7/424 (1%)
Query: 48 DFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAER 107
D+GAF E+F L PP A PL L FA+K++FD +GYVTGFG+PDW R H A
Sbjct: 6 DYGAFTEKFTL-----PPNSAPALPLKSLTFAVKEIFDTEGYVTGFGNPDWARTHPVATS 60
Query: 108 TAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVA 167
TA LL+ GATC+GKTV+DE A+ I GEN HYGTP NP P +PGGSSSGSAVAV
Sbjct: 61 TAPTALALLRAGATCVGKTVMDEMAYSINGENIHYGTPRNPCAPDRVPGGSSSGSAVAVG 120
Query: 168 AQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASIL 227
A+LVDF+LGTDT G VRVPAS+CGI G+RPSHG VS GV+P SQS DTVG AR+ IL
Sbjct: 121 AKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHGAVSESGVIPMSQSFDTVGWFARDPMIL 180
Query: 228 HRVGHVLLQLNAVEPR-RARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMN 286
RVG V+LQL V P R +I A+D FQLS P + KA+E L G +
Sbjct: 181 SRVGGVILQLPDVAPPIRPTSIIIAEDCFQLSSTPFDVVTGTVIKAVEKLYGGDVLKPEI 240
Query: 287 VGQYIASNVPSLKGLRAQSTSPE-NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRL 345
+G Y+ +NVPSLK ++ + + +L ALSS M LQR+EFK + EW+ + KP L
Sbjct: 241 LGDYVKTNVPSLKHFMSKDNTDQIYNIPSLAALSSAMRLLQRFEFKNNHGEWISAVKPDL 300
Query: 346 GYNVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKT 405
G + ERV +A+ TT +NI I Y ++ E+ AL LL D +L+IPTV PP KL T +
Sbjct: 301 GPGISERVSDALRTTGENIDICYSIKRELHDALSALLGDFGVLMIPTVPGPPPKLQTNTS 360
Query: 406 YSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDS 465
F R L SI +SG CQV+IP+G YN P+SIS + HG DKFLL V LYDS
Sbjct: 361 DLEIFRARAFSLLSIAGVSGFCQVSIPLGMYNNLPLSISLVARHGADKFLLHLVESLYDS 420
Query: 466 LQEQ 469
++++
Sbjct: 421 IEDR 424
>gi|224125294|ref|XP_002319550.1| amidase family protein [Populus trichocarpa]
gi|222857926|gb|EEE95473.1| amidase family protein [Populus trichocarpa]
Length = 427
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/426 (49%), Positives = 277/426 (65%), Gaps = 8/426 (1%)
Query: 48 DFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAER 107
D+GAF+++F L +P A QPL GL FA+KD+ +GYVTGFG PDW R H A
Sbjct: 6 DYGAFMDKFVL----EPTSSAHDQPLHGLTFAVKDM---EGYVTGFGHPDWARTHSAATS 58
Query: 108 TAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVA 167
TA V +L+ GATC+GKT++DE A+ I GEN HYGTP+NP P +PGGSSSGSAVAV
Sbjct: 59 TAPAVLAVLRGGATCVGKTIMDEMAYSINGENIHYGTPINPCAPDRVPGGSSSGSAVAVG 118
Query: 168 AQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASIL 227
A++VDF+LGTDT G VRVPAS+CGILG+RPSH V GV+P +QS DTVG AR+ IL
Sbjct: 119 AKIVDFSLGTDTGGSVRVPASYCGILGFRPSHDAVPSAGVIPMAQSFDTVGWFARDPVIL 178
Query: 228 HRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNV 287
RVGH+LLQ ++P + ++I A+D FQLS +P + V+ K++E + G +H +
Sbjct: 179 SRVGHILLQSPVMDPIKPSQVIIAEDCFQLSNIPNDRLGQVLVKSVEKIYGGHILKHTVL 238
Query: 288 GQYIASNVPSLKGLRAQSTSP-ENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLG 346
G Y+ VPSLK + E+ +L ALS+ M SL+RYEFK + EW+ + KP LG
Sbjct: 239 GDYVKEKVPSLKHFMSNEIKELEHNIPSLAALSNAMRSLERYEFKDNHGEWITAVKPELG 298
Query: 347 YNVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTY 406
+ ERV EA+ TT +N+ + V+ E+ AAL LL+D IL IPTVS P KL T
Sbjct: 299 PAISERVWEAVRTTGENVDACHSVKTELHAALATLLQDFGILAIPTVSGLPPKLQADPTT 358
Query: 407 SAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSL 466
F + L SI +SG CQV+IP+G Y+ P+S+S + G D FLL+ V LY +L
Sbjct: 359 LKIFRAKAFGLLSIAGVSGFCQVSIPLGMYDNLPVSVSLLAKQGSDAFLLNVVESLYGTL 418
Query: 467 QEQVNI 472
+EQV I
Sbjct: 419 KEQVEI 424
>gi|449534001|ref|XP_004173958.1| PREDICTED: outer envelope protein 64, mitochondrial-like, partial
[Cucumis sativus]
Length = 269
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 193/269 (71%), Positives = 223/269 (82%)
Query: 58 LIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLK 117
L PFPQP PPAARQ LAGL FA+KDVFDVK YVTGFG+PDWKR H AE+T +VTLLLK
Sbjct: 1 LRPFPQPSPPAARQSLAGLTFAVKDVFDVKDYVTGFGNPDWKRTHDVAEKTDEMVTLLLK 60
Query: 118 NGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGT 177
NGA C+GKTV+DE FGITGENK YGTP NP++ S +PGGSSSGSAVAVA +LVDFALGT
Sbjct: 61 NGAACVGKTVMDELGFGITGENKQYGTPTNPKLSSFVPGGSSSGSAVAVAGELVDFALGT 120
Query: 178 DTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQL 237
DT+GC+R+PASFCGI +RPSHG + M VL NS SLDTVG AR+ S LHRVGHVLL+L
Sbjct: 121 DTVGCIRIPASFCGIFAFRPSHGVIPMNRVLSNSPSLDTVGWFARDPSTLHRVGHVLLKL 180
Query: 238 NAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPS 297
N+VEPRR RRL+ ADD+FQLSKVP KT+HV+ KAIE+LSGYQ+P+HMN G+Y+ASNVPS
Sbjct: 181 NSVEPRRMRRLVIADDLFQLSKVPLQKTVHVVEKAIENLSGYQSPKHMNFGEYLASNVPS 240
Query: 298 LKGLRAQSTSPENGTATLKALSSVMLSLQ 326
LKG QS + + G LKALSSVM+ LQ
Sbjct: 241 LKGFHNQSPTLQKGITILKALSSVMILLQ 269
>gi|357441631|ref|XP_003591093.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Medicago truncatula]
gi|355480141|gb|AES61344.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Medicago truncatula]
gi|388518579|gb|AFK47351.1| unknown [Medicago truncatula]
Length = 423
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/422 (50%), Positives = 272/422 (64%), Gaps = 5/422 (1%)
Query: 48 DFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAER 107
D+GAF+E+F L P P PL L FA+KD+FDVKGYV GFG+PDW R H A
Sbjct: 6 DYGAFMEKFILPPNSSSP----DFPLNSLTFAVKDIFDVKGYVAGFGNPDWARTHQAATS 61
Query: 108 TAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVA 167
TA V +L GATC+GKTV+DE A+ I GEN HYGTP NP +PGGSSSGSAVAV
Sbjct: 62 TAPTVLAILSAGATCVGKTVMDEMAYSINGENIHYGTPRNPCAEDRVPGGSSSGSAVAVG 121
Query: 168 AQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASIL 227
A+LVDF+LGTDT G VRVPAS+CGI G+RPSHG +S GV+P +QS DTVG AR+ IL
Sbjct: 122 AKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHGRISKSGVVPMAQSFDTVGWFARDPKIL 181
Query: 228 HRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNV 287
VGHVLLQ + P R ++I A+D FQLS VP ++ KAI+ L G + +
Sbjct: 182 SAVGHVLLQSPRITPIRPTQIIIAEDCFQLSSVPFDVVSRIVIKAIQKLYGDGLLRYEFL 241
Query: 288 GQYIASNVPSLKGLRAQSTSPE-NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLG 346
G+Y+ + VP LK +Q + + +L ALSS M LQRYEFK + EW+ + KP LG
Sbjct: 242 GEYVKAQVPGLKHFMSQEKTDQIYNIPSLAALSSAMRLLQRYEFKNNHGEWINAVKPELG 301
Query: 347 YNVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTY 406
+ ERV +A+ TT++NI I + E+R AL LL D +L+IPTV PP KL T +
Sbjct: 302 PGISERVSDALRTTEENIDICRSIIRELRDALTSLLGDFGVLMIPTVPGPPPKLQTNSSD 361
Query: 407 SAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSL 466
F R L SI +SG CQV+IP+G YN+ P S+S + +G D+FLL V +YD++
Sbjct: 362 LEIFRARAFSLLSIVGVSGFCQVSIPLGMYNDLPASVSLVARNGADEFLLHLVESIYDNI 421
Query: 467 QE 468
++
Sbjct: 422 EK 423
>gi|215272285|dbj|BAG84637.1| indole-3-acetamide hydrolase [Nicotiana tabacum]
Length = 425
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/425 (49%), Positives = 271/425 (63%), Gaps = 6/425 (1%)
Query: 48 DFGAFLERFELIPFPQPPPPAARQ-PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAE 106
++GA +E+F L QP ++ Q PL GL FA+KD+FDV+G++TGFG+PDW + H A
Sbjct: 5 EYGALIEKFTL----QPICSSSEQLPLNGLTFAVKDIFDVEGHITGFGNPDWAKTHSAAT 60
Query: 107 RTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAV 166
TA V LLK GATCI KTV+DE A+ I GEN HYGTPVNP P +PGGSSSGSAVAV
Sbjct: 61 STATTVLTLLKAGATCIAKTVMDEMAYSINGENVHYGTPVNPVSPDRVPGGSSSGSAVAV 120
Query: 167 AAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASI 226
A+LVDF+LGTDT G VRVPAS+CGI G RPSHG VS +GV P +QS DTVG AR+ I
Sbjct: 121 GAKLVDFSLGTDTGGSVRVPASYCGIYGIRPSHGVVSTVGVTPMAQSFDTVGWFARDPLI 180
Query: 227 LHRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMN 286
L +VG VLLQ V +I A+D F+L + I V+ ++E L G ++ +
Sbjct: 181 LKQVGRVLLQSPQVNSVHPTNIIIAEDCFKLLDSKSNQLIEVLVSSVEKLYGSHMIKYAS 240
Query: 287 VGQYIASNVPSLKGLRAQST-SPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRL 345
VG I NVPSLK T + E+ +L ALS+ M LQRYEFK + EWV + KP L
Sbjct: 241 VGDCIEGNVPSLKKFMTLGTGNDESYIPSLLALSAAMRLLQRYEFKENHGEWVSTVKPSL 300
Query: 346 GYNVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKT 405
G + ERV EA+ T +NI + + V+ E+RAAL LL D IL IPTV PP KL T +
Sbjct: 301 GPGIAERVWEALKATDENIDVCHSVKAELRAALTALLGDSGILAIPTVPGPPPKLRTDTS 360
Query: 406 YSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDS 465
F + L SI +SG CQV+IP+G + PIS+S + HG D LLD V +++
Sbjct: 361 ALEGFRVKAFSLLSIAGVSGFCQVSIPLGMQDNLPISVSLLGKHGSDWLLLDAVEAIHNV 420
Query: 466 LQEQV 470
L+ Q+
Sbjct: 421 LKGQI 425
>gi|449435685|ref|XP_004135625.1| PREDICTED: amidase 1-like [Cucumis sativus]
Length = 430
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/427 (47%), Positives = 276/427 (64%), Gaps = 7/427 (1%)
Query: 48 DFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAER 107
D+GAF+E+F L Q P+ + PL+GL FA+KD+FD++GYV GFG+P+W R H A +
Sbjct: 5 DYGAFIEKFLL----QMSSPSDKLPLSGLTFAVKDIFDIEGYVAGFGNPEWLRTHPPANQ 60
Query: 108 TAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVA 167
TA V +L+ GATCIGKT++DE AF I GEN HYGTP NP IPGGSSSGS VAVA
Sbjct: 61 TAPAVLTILRGGATCIGKTIMDEMAFSINGENFHYGTPQNPHASDRIPGGSSSGSGVAVA 120
Query: 168 AQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASIL 227
A+LVDF+LGTDT G VRVPAS+CGILG+RPSHG VS GV+P +QS DTVG AR+++IL
Sbjct: 121 AKLVDFSLGTDTGGSVRVPASYCGILGFRPSHGVVSTSGVIPMTQSFDTVGWFARDSAIL 180
Query: 228 HRVGHVLLQLNAVEPRRARRLIFADDIFQ-LSKVPKLKTIHVISKAIESLSGYQNPEHMN 286
RVG +LLQ +E + ++ A+D F+ LS + + ++E L G + ++
Sbjct: 181 KRVGWLLLQEPEIEHYKPTKVFIAEDCFKLLSNITSERLTQAFVSSVEKLFGGHLIKQIS 240
Query: 287 VGQYIASNVPSLKGLRAQSTSP-ENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRL 345
+G+Y+ VPSLK + ++ +L AL LQR+EF + EWV+S L
Sbjct: 241 LGKYVEDKVPSLKHFMIEENDGYKHSIPSLAALVRSKRFLQRHEFNINHGEWVRSYHSHL 300
Query: 346 GYNVFERVLEAI-NTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKK 404
G + ER+LE I T +NI + ++ E+R AL LL+D +L IPTV PP KLNT
Sbjct: 301 GPGISERILEFIREVTDENIDLSRSIQIELREALAALLEDFGVLAIPTVPGPPPKLNTDI 360
Query: 405 TYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYD 464
+ +F + L +I ++SG CQV++P+G YN P+SIS + HG D FLL+ V LY
Sbjct: 361 SEQYDFRAKAFSLLTIAAVSGVCQVSVPLGLYNGLPVSISLLAKHGADGFLLNLVDSLYS 420
Query: 465 SLQEQVN 471
+L+E+V
Sbjct: 421 TLKEEVE 427
>gi|449518013|ref|XP_004166038.1| PREDICTED: amidase 1-like [Cucumis sativus]
Length = 430
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/427 (47%), Positives = 276/427 (64%), Gaps = 7/427 (1%)
Query: 48 DFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAER 107
D+GAF+E+F L Q P+ + PL+GL FA+KD+FD++GYV GFG+P+W R H A +
Sbjct: 5 DYGAFIEKFLL----QMSSPSDKLPLSGLTFAVKDIFDIEGYVAGFGNPEWLRTHPPANQ 60
Query: 108 TAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVA 167
TA V +L+ GATCIGKT++DE AF I GEN HYGTP NP IPGGSSSGS VAVA
Sbjct: 61 TAPAVLTILRGGATCIGKTIMDEMAFSINGENFHYGTPQNPHASDRIPGGSSSGSGVAVA 120
Query: 168 AQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASIL 227
A+LVDF+LGTDT G VRVPAS+CGILG+RPSHG VS GV+P +QS DTVG AR+++IL
Sbjct: 121 AKLVDFSLGTDTGGSVRVPASYCGILGFRPSHGVVSTSGVIPMTQSFDTVGWFARDSAIL 180
Query: 228 HRVGHVLLQLNAVEPRRARRLIFADDIFQ-LSKVPKLKTIHVISKAIESLSGYQNPEHMN 286
RVG +LLQ +E + ++ A+D F+ LS + + ++E L G + ++
Sbjct: 181 KRVGWLLLQEPEIEHYKPTKVFIAEDCFKLLSNITSERLTQAFVSSVEKLFGGHLIKQIS 240
Query: 287 VGQYIASNVPSLKGLRAQSTSP-ENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRL 345
+G+Y+ VPSLK + ++ +L AL LQR+EF + EWV+S L
Sbjct: 241 LGKYVEDKVPSLKHFMIEENDGYKHSIPSLAALVRSKRFLQRHEFNINHGEWVRSYHSHL 300
Query: 346 GYNVFERVLEAI-NTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKK 404
G + ER+LE I T +NI + ++ E+R AL L++D +L IPTV PP KLNT
Sbjct: 301 GPGISERILEFIREVTDENIDLSRSIQIELREALAALVEDFGVLAIPTVPGPPPKLNTDI 360
Query: 405 TYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYD 464
+ +F + L +I ++SG CQV++P+G YN P+SIS + HG D FLL+ V LY
Sbjct: 361 SEQYDFRAKAFSLLTIAAVSGVCQVSVPLGLYNGLPVSISLLAKHGADGFLLNLVDSLYS 420
Query: 465 SLQEQVN 471
+L+E+V
Sbjct: 421 TLKEEVE 427
>gi|297843692|ref|XP_002889727.1| hypothetical protein ARALYDRAFT_888131 [Arabidopsis lyrata subsp.
lyrata]
gi|297335569|gb|EFH65986.1| hypothetical protein ARALYDRAFT_888131 [Arabidopsis lyrata subsp.
lyrata]
Length = 425
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/423 (47%), Positives = 260/423 (61%), Gaps = 11/423 (2%)
Query: 48 DFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAER 107
DFGAF+E+ + P P + Q GL FAIKD+FDV+G VTGFG+PDW R H A
Sbjct: 6 DFGAFIEKVTISPTSTSSLPPSLQ---GLTFAIKDIFDVEGRVTGFGNPDWLRTHTAATS 62
Query: 108 TAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVA 167
TA VV+ LL+ GAT +G T++DE A+ I GEN HYGTP NP +PGGSSSGSAV VA
Sbjct: 63 TAPVVSSLLEAGATALGITIMDEMAYSINGENAHYGTPRNPIAFDRVPGGSSSGSAVVVA 122
Query: 168 AQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASIL 227
A+LVDF++GTDT G VRVPAS+CGI G+RPSHG VS +GV P +QS DTVG AR+ + L
Sbjct: 123 ARLVDFSIGTDTGGSVRVPASYCGIFGFRPSHGAVSTVGVTPMAQSFDTVGWFARDTATL 182
Query: 228 HRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIE-SLSGYQNPEHMN 286
RVG VLLQ + + P +LI ADD F+L VP + + ++E S G + +N
Sbjct: 183 KRVGCVLLQQDHLNPIEPSQLIIADDCFKLCSVPHDLLVQPLVGSVEKSFGGNTVVKEVN 242
Query: 287 VGQYIASNVPSLKGLRAQ---STSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKP 343
+G+YI NVPSLK +T E +L ALSS M LQR+EFK + W+ KP
Sbjct: 243 LGEYIEQNVPSLKHFMTSDDVTTQQELCIPSLMALSSSMRLLQRHEFKINHGAWISLVKP 302
Query: 344 RLGYNVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTK 403
G + R+ EAI T+++ I + V++E+ AL LL + +LVIPTV PP L
Sbjct: 303 EFGPGISARIEEAIRTSEEKIDLCRSVKSELITALSTLLGEKGVLVIPTVPGPPPHLQAN 362
Query: 404 KTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLY 463
F R L SI +SG CQV+IP+G + P+S+S + +G D FL L L
Sbjct: 363 VAALESFRSRAFSLLSIAGVSGFCQVSIPLGLHENLPVSVSLVAKYGSDGFL----LSLV 418
Query: 464 DSL 466
DSL
Sbjct: 419 DSL 421
>gi|242046326|ref|XP_002461034.1| hypothetical protein SORBIDRAFT_02g039510 [Sorghum bicolor]
gi|241924411|gb|EER97555.1| hypothetical protein SORBIDRAFT_02g039510 [Sorghum bicolor]
Length = 437
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 197/426 (46%), Positives = 262/426 (61%), Gaps = 10/426 (2%)
Query: 48 DFGAFLERFELIPFPQPPPPAARQ--PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEA 105
D+GAF+E+FEL+P P ++Q PL GL FAIKD+FD+ G VTGFG+PDW R H A
Sbjct: 6 DYGAFMEKFELLP------PQSQQHLPLHGLTFAIKDIFDISGRVTGFGNPDWARTHAPA 59
Query: 106 ERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVA 165
T+ VV L GA IGKTV+DE A+ I GEN HYGTP NP P +PGGSSSGSAVA
Sbjct: 60 GATSPVVLATLAAGAISIGKTVMDEMAYSINGENAHYGTPTNPCAPDRVPGGSSSGSAVA 119
Query: 166 VAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNAS 225
V A+LVDFALGTDT G VRVPA++CGI G RPSHG VS V+P SQ DTVG AR+ S
Sbjct: 120 VGAKLVDFALGTDTGGSVRVPAAYCGIFGLRPSHGLVSTENVIPMSQMFDTVGWFARDLS 179
Query: 226 ILHRVGHVLLQLNAVEP-RRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEH 284
L RV +VLL L A +R D F++ +T +++ ++ G ++
Sbjct: 180 TLSRVSNVLLPLPADNTIKRPTHFKIPKDCFEILGSLNDQTYQILNASVAKRFGNDAVDN 239
Query: 285 MNVGQYIASNVPSL-KGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKP 343
N+G++++SNVP++ K + S S L +S VM LQR EFK + EWV + +P
Sbjct: 240 RNLGEFVSSNVPTVGKFISDFSRSEAPSVPALSVISYVMRCLQRSEFKANHAEWVNTVRP 299
Query: 344 RLGYNVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTK 403
LG + ERV EAI + ++ + ++ E + AL L+KDD ILVIPTV P KL +
Sbjct: 300 NLGPGIRERVYEAIASEDGPMEDFHVLKTEFKLALSALIKDDGILVIPTVPGSPPKLRME 359
Query: 404 KTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLY 463
F R L SI +SG CQ++IP+G P+S+S + HG D+FLL +LY
Sbjct: 360 AVALENFRARAFSLLSIAGLSGFCQLSIPLGVRGGVPVSVSLVACHGADRFLLSVAQELY 419
Query: 464 DSLQEQ 469
++L+E+
Sbjct: 420 ETLKEE 425
>gi|18390964|ref|NP_563831.1| amidase 1 [Arabidopsis thaliana]
gi|75262859|sp|Q9FR37.1|AMI1_ARATH RecName: Full=Amidase 1; Short=AtAMI1; AltName: Full=Translocon at
the outer membrane of chloroplasts 64-I; Short=AtTOC64-I
gi|11493702|gb|AAG35612.1|AF202077_1 amidase [Arabidopsis thaliana]
gi|14335038|gb|AAK59783.1| At1g08980/F7G19_15 [Arabidopsis thaliana]
gi|28416539|gb|AAO42800.1| At1g08980/F7G19_15 [Arabidopsis thaliana]
gi|332190257|gb|AEE28378.1| amidase 1 [Arabidopsis thaliana]
Length = 425
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 202/423 (47%), Positives = 261/423 (61%), Gaps = 11/423 (2%)
Query: 48 DFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAER 107
DFGAF+E+ + P ++ L GL FAIKD+FDV+G VTGFG+PDW R H A
Sbjct: 6 DFGAFIEKVTISPTSTS---SSPPSLQGLTFAIKDIFDVEGRVTGFGNPDWLRTHSAATS 62
Query: 108 TAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVA 167
TA VV+ LL+ GAT +G T++DE A+ I GEN HYGTP NP +PGGSSSGSAVAVA
Sbjct: 63 TAPVVSSLLEAGATALGITIMDEMAYSINGENAHYGTPRNPIAFDRVPGGSSSGSAVAVA 122
Query: 168 AQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASIL 227
A+LVDF++GTDT G VRVPAS+CGI G+RPSHG VS +G+ P +QS DTVG AR+ + L
Sbjct: 123 ARLVDFSIGTDTGGSVRVPASYCGIFGFRPSHGAVSTVGLTPMAQSFDTVGWFARDTATL 182
Query: 228 HRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIE-SLSGYQNPEHMN 286
RVG VLLQ + + P +LI ADD F+L VP + + ++E S G + +N
Sbjct: 183 KRVGCVLLQQHHLNPIEPSQLIIADDCFKLCSVPHDLLVQPLVGSVEKSFGGNTVVKKVN 242
Query: 287 VGQYIASNVPSLKGLRAQ---STSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKP 343
+G+YI NVPSLK +T E +L ALSS M LQR+EFK + W+ S KP
Sbjct: 243 LGEYIGQNVPSLKHFMTSDDVTTQQEFCIPSLMALSSSMRLLQRHEFKINHGAWISSVKP 302
Query: 344 RLGYNVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTK 403
G + ER+ EAI T+ + I V++E+ AL LL + +LVIPTV PP L
Sbjct: 303 EFGPGISERIEEAIRTSDEKIDHCRSVKSELITALSTLLGEKGVLVIPTVPGPPPHLQAN 362
Query: 404 KTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLY 463
F R L SI +SG CQV+IP+G + P+S+S + +G D FL L L
Sbjct: 363 VAALESFRSRAFSLLSIAGVSGFCQVSIPLGLHENLPVSVSLVAKYGSDGFL----LSLV 418
Query: 464 DSL 466
DSL
Sbjct: 419 DSL 421
>gi|293337129|ref|NP_001170670.1| uncharacterized protein LOC100384731 [Zea mays]
gi|238006782|gb|ACR34426.1| unknown [Zea mays]
gi|414590908|tpg|DAA41479.1| TPA: hypothetical protein ZEAMMB73_492598 [Zea mays]
Length = 444
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 191/428 (44%), Positives = 263/428 (61%), Gaps = 4/428 (0%)
Query: 48 DFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAER 107
++GAF+E+F+++P + PL GL FAIKD+FD+ G VTGFG+PDW R H A
Sbjct: 9 EYGAFMEKFKMLP--SQSQHQQQLPLHGLTFAIKDIFDIGGRVTGFGNPDWARTHAPAGA 66
Query: 108 TAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVA 167
T+ VV L GA IGKTV+DE A+ I GEN HYGTP NP P +PGGSSSGSAVAVA
Sbjct: 67 TSPVVLAALAAGAISIGKTVMDEMAYSINGENAHYGTPTNPCAPDRVPGGSSSGSAVAVA 126
Query: 168 AQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASIL 227
A+LVDFALGTDT G VRVPA++CGI G RPSHG VS V+P SQ DTVG AR+ S+L
Sbjct: 127 AKLVDFALGTDTGGSVRVPAAYCGIFGLRPSHGLVSTENVIPMSQMFDTVGWFARDLSML 186
Query: 228 HRVGHVLLQLNAVEP-RRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMN 286
V +VLL L A ++ + D F++ +T +++ ++ G ++ N
Sbjct: 187 SCVSNVLLPLAADNTIKQPTHVTIPKDCFEILGSLSDQTYQILNASVAKRFGNDAVDNRN 246
Query: 287 VGQYIASNVPSL-KGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRL 345
+G+++++NVP++ K + S S L +S VM LQR EFK + EWVK+ KP L
Sbjct: 247 LGEFVSANVPTVGKFISDFSRSEAPSVPALSVISYVMRCLQRSEFKANHGEWVKTVKPNL 306
Query: 346 GYNVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKT 405
G + ERV EAI + ++ + ++ E ++AL L+KDD IL IPTV P KL +
Sbjct: 307 GPGIRERVHEAIASEDGPMEDFHVLKTEFKSALSALIKDDGILAIPTVPGSPPKLRMEAV 366
Query: 406 YSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDS 465
F R L SI +SG CQ++IP+G + P+S+S + HG D+FLL +LY +
Sbjct: 367 ALENFRARAFSLLSIAGLSGFCQLSIPLGVRHGVPVSVSLVACHGADRFLLSVAQELYGT 426
Query: 466 LQEQVNIA 473
L+++ A
Sbjct: 427 LKQETKKA 434
>gi|357166870|ref|XP_003580892.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like
[Brachypodium distachyon]
Length = 440
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 199/426 (46%), Positives = 263/426 (61%), Gaps = 5/426 (1%)
Query: 48 DFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAER 107
D GAF+E+F L+P P P + PL GL FAIKD+FD+ G VTGFG+PDW R H A
Sbjct: 7 DHGAFMEKFLLLPLP-PTEEQQQLPLHGLTFAIKDIFDIAGRVTGFGNPDWSRTHGPAAA 65
Query: 108 TAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVA 167
TA V LL GA +G+TV+DE A+ I GEN HYGTP NP P +PGGSSSGSAVAVA
Sbjct: 66 TAPAVLALLAAGAAAVGRTVMDEMAYSINGENAHYGTPANPCAPDRVPGGSSSGSAVAVA 125
Query: 168 AQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASIL 227
A L DF+LGTDT G VRVPA++CGI G RPSHG VS V+P +Q DTVG AR+ + L
Sbjct: 126 ASLADFSLGTDTGGSVRVPAAYCGIFGLRPSHGLVSTENVIPMAQMFDTVGWFARDLATL 185
Query: 228 HRVGHVLLQLNAVEPRRARRLIFADDIFQ-LSKVPKLKTIHVISKAIESLSGYQNPEHMN 286
RV +VLL L A E RR R++ D F+ L T +++ + + G ++ N
Sbjct: 186 SRVSNVLLPLPADEGRRPSRVMIPADCFEILGSSVDDHTYEILNASAAKIFGSDAVDNRN 245
Query: 287 VGQYIASNVPSLKGLRAQSTSPENGTA--TLKALSSVMLSLQRYEFKTIYEEWVKSAKPR 344
+G +++SN+PS+ + + S + T L A+S VM LQR EFK + EWV + KP
Sbjct: 246 LGDFVSSNIPSIGKFMSSAASVDEATCVPALSAISHVMRCLQRSEFKANHAEWVNTVKPN 305
Query: 345 LGYNVFERVLEAINTTQDNI-KILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTK 403
LG + ERV EAI + + + + L+ VR E + AL LLK++ IL IPTV P KL +
Sbjct: 306 LGLGIRERVEEAIASADEPVMEDLHAVRTEFKTALAALLKENGILAIPTVPGAPPKLRME 365
Query: 404 KTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLY 463
F R L SI +SG CQV+IP+G + P+S+S + HG D FL+ +LY
Sbjct: 366 AVKLENFRSRAFSLLSIAGLSGFCQVSIPLGTRDGVPVSVSLLARHGADHFLIGVAQELY 425
Query: 464 DSLQEQ 469
DSL+++
Sbjct: 426 DSLRDE 431
>gi|125547023|gb|EAY92845.1| hypothetical protein OsI_14646 [Oryza sativa Indica Group]
Length = 435
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 197/427 (46%), Positives = 260/427 (60%), Gaps = 7/427 (1%)
Query: 45 GRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHE 104
GR D+GAF+ERF L P P + PL GL FAIKD+FD+ G VTGFG+PDW R H
Sbjct: 7 GRGDYGAFMERFVLPPPPS-----QQLPLHGLTFAIKDIFDIAGRVTGFGNPDWARTHAP 61
Query: 105 AERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAV 164
A T+ VV L GAT +G T++DE A+ I GEN HYGTP NP P +PGGSSSGSAV
Sbjct: 62 AAATSPVVLAALAAGATSLGTTIMDEMAYSINGENTHYGTPTNPCAPGRVPGGSSSGSAV 121
Query: 165 AVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
AVAA LVDF+LGTDT G VRVPA++CGI G RPSHG VS V+P +Q DTVG +R+
Sbjct: 122 AVAANLVDFSLGTDTGGSVRVPAAYCGIFGLRPSHGLVSAENVIPMAQMFDTVGWFSRDL 181
Query: 225 SILHRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEH 284
S L RV VLL L ++ ++ D FQ+ +T +I+ ++ Q ++
Sbjct: 182 STLSRVTKVLLPLPDDIVKQPTQVTIPMDCFQILGSLNDRTYQIINASVAKRFDSQIIDN 241
Query: 285 MNVGQYIASNVPSL-KGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKP 343
N+G +I+ NVPS+ K + S S L +S VM LQR +FK + EWV + KP
Sbjct: 242 RNLGDFISDNVPSIGKFITDFSESELPSVPALSVISHVMRGLQRSQFKANHAEWVNTVKP 301
Query: 344 RLGYNVFERVLEAINT-TQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNT 402
LG + ER+LEAI + ++++ +R E ++AL LLKD IL IPTV PP K+
Sbjct: 302 NLGPGLRERILEAIASGDNESLEDFQAIRAEFKSALAALLKDHGILAIPTVPGPPPKVGM 361
Query: 403 KKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDL 462
+ F R L SI +SG CQV+IP+G N P+S+S + HG D FLL+ V +L
Sbjct: 362 EAAPLENFRARAFSLLSIAGLSGFCQVSIPLGMRNGLPVSVSLVARHGADHFLLNVVEEL 421
Query: 463 YDSLQEQ 469
Y +L ++
Sbjct: 422 YQTLIDE 428
>gi|116308869|emb|CAH66005.1| H0613H07.3 [Oryza sativa Indica Group]
Length = 435
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 197/427 (46%), Positives = 260/427 (60%), Gaps = 7/427 (1%)
Query: 45 GRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHE 104
GR D+GAF+ERF L P P + PL GL FAIKD+FD+ G VTGFG+PDW R H
Sbjct: 7 GRGDYGAFMERFVLPPPPS-----QQLPLHGLTFAIKDIFDIAGRVTGFGNPDWARTHAP 61
Query: 105 AERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAV 164
A T+ VV L GAT +G T++DE A+ I GEN HYGTP NP P +PGGSSSGSAV
Sbjct: 62 AAATSPVVLAALAAGATSLGTTIMDEMAYSINGENTHYGTPTNPCAPGRVPGGSSSGSAV 121
Query: 165 AVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
AVAA LVDF+LGTDT G VRVPA++CGI G RPSHG VS V+P +Q DTVG +R+
Sbjct: 122 AVAANLVDFSLGTDTGGSVRVPAAYCGIFGLRPSHGLVSAENVIPMAQMFDTVGWFSRDL 181
Query: 225 SILHRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEH 284
S L RV VLL L ++ ++ D FQ+ +T +I+ ++ Q ++
Sbjct: 182 STLSRVTKVLLPLPDDIVKQPTQVTIPMDCFQILGSLNDRTYQIINASVAKRFDSQIIDN 241
Query: 285 MNVGQYIASNVPSL-KGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKP 343
N+G +I+ NVPS+ K + S S L +S VM LQR +FK + EWV + KP
Sbjct: 242 RNLGDFISDNVPSIGKFITDFSESELPSVPALSVISHVMRGLQRSQFKANHAEWVNTVKP 301
Query: 344 RLGYNVFERVLEAINT-TQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNT 402
LG + ER+LEAI + ++++ +R E ++AL LLKD IL IPTV PP K+
Sbjct: 302 NLGPGLRERILEAIASGDNESLEDFQAIRAEFKSALAALLKDHGILAIPTVPGPPPKVGM 361
Query: 403 KKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDL 462
+ F R L SI +SG CQV+IP+G N P+S+S + HG D FLL+ V +L
Sbjct: 362 EAAPLENFRARAFSLLSIAGLSGFCQVSIPLGMRNGLPVSVSLVARHGADHFLLNVVEEL 421
Query: 463 YDSLQEQ 469
Y +L ++
Sbjct: 422 YQTLIDE 428
>gi|115456912|ref|NP_001052056.1| Os04g0118100 [Oryza sativa Japonica Group]
gi|32451277|emb|CAE01284.1| OSJNBa0020P07.1 [Oryza sativa Japonica Group]
gi|113563627|dbj|BAF13970.1| Os04g0118100 [Oryza sativa Japonica Group]
Length = 435
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 197/427 (46%), Positives = 260/427 (60%), Gaps = 7/427 (1%)
Query: 45 GRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHE 104
GR D+GAF+ERF L P P + PL GL FAIKD+FD+ G VTGFG+PDW R H
Sbjct: 7 GRGDYGAFMERFVLPPPPS-----QQLPLHGLTFAIKDIFDIAGRVTGFGNPDWARTHAP 61
Query: 105 AERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAV 164
A T+ VV L GAT +G T++DE A+ I GEN HYGTP NP P +PGGSSSGSAV
Sbjct: 62 AAATSPVVLAALAAGATSLGTTIMDEMAYSINGENTHYGTPTNPCAPGRVPGGSSSGSAV 121
Query: 165 AVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
AVAA LVDF+LGTDT G VRVPA++CGI G RPSHG VS V+P +Q DTVG +R+
Sbjct: 122 AVAANLVDFSLGTDTGGSVRVPAAYCGIFGLRPSHGLVSAENVIPMAQMFDTVGWFSRDL 181
Query: 225 SILHRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEH 284
S L RV VLL L ++ ++ D FQ+ +T +I+ ++ Q ++
Sbjct: 182 STLSRVTKVLLPLPDDIVKQPTQVTIPMDCFQILGSLDDRTYQIINASVAKRFDSQILDN 241
Query: 285 MNVGQYIASNVPSL-KGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKP 343
N+G +I+ NVPS+ K + S S L +S VM LQR +FK + EWV + KP
Sbjct: 242 RNLGDFISDNVPSIGKFITDFSESELPSVPALSVISHVMRGLQRSQFKANHAEWVNTVKP 301
Query: 344 RLGYNVFERVLEAINT-TQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNT 402
LG + ER+LEAI + ++++ +R E ++AL LLKD IL IPTV PP K+
Sbjct: 302 NLGPGLRERILEAIASGDNESLEDFQAIRAEFKSALAALLKDHGILAIPTVPGPPPKVGM 361
Query: 403 KKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDL 462
+ F R L SI +SG CQV+IP+G N P+S+S + HG D FLL+ V +L
Sbjct: 362 EAAPLENFRARAFSLLSIAGLSGFCQVSIPLGMRNGLPVSVSLVARHGADHFLLNVVEEL 421
Query: 463 YDSLQEQ 469
Y +L ++
Sbjct: 422 YQTLIDE 428
>gi|297602073|ref|NP_001052054.2| Os04g0117800 [Oryza sativa Japonica Group]
gi|116308868|emb|CAH66004.1| H0613H07.2 [Oryza sativa Indica Group]
gi|125547022|gb|EAY92844.1| hypothetical protein OsI_14645 [Oryza sativa Indica Group]
gi|125589165|gb|EAZ29515.1| hypothetical protein OsJ_13589 [Oryza sativa Japonica Group]
gi|215769387|dbj|BAH01616.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675132|dbj|BAF13968.2| Os04g0117800 [Oryza sativa Japonica Group]
Length = 434
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 191/426 (44%), Positives = 252/426 (59%), Gaps = 6/426 (1%)
Query: 48 DFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAER 107
DFGAF+ERF + P PPP + + PL GL FAIKD+FD+ G VTGFG+PDW R H A
Sbjct: 4 DFGAFMERF--VLPPPPPPSSQQLPLHGLTFAIKDIFDIAGRVTGFGNPDWARTHAPAAA 61
Query: 108 TAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVA 167
T+ VV L GAT +G T++DE A+ I GEN HYGTP NP P +PGGSSSGSAVAVA
Sbjct: 62 TSPVVLAALAAGATSLGTTIMDEMAYSIYGENAHYGTPANPCAPGRVPGGSSSGSAVAVA 121
Query: 168 AQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASIL 227
A LVDF+LGTDT G VRVPA++CGI G R SHG VS V+P +Q DTVG AR+ S L
Sbjct: 122 ANLVDFSLGTDTGGSVRVPAAYCGIFGLRTSHGLVSAQNVIPMAQMFDTVGWFARDLSTL 181
Query: 228 HRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNV 287
RV VLL L + + D FQ+ P T +++ ++ G ++ N+
Sbjct: 182 SRVTKVLLPLPDDTVKHPTHVTIPMDCFQILGSPDDHTYQIVNASVAKKFGSHAIDNANL 241
Query: 288 GQYIASNVPSLKGLRAQSTSPE-NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLG 346
G +++ NVPS+ A + E L +S VM SL R +FK + EWV S KP LG
Sbjct: 242 GDFVSDNVPSIGKFIADFSESELPSVPALSVISHVMFSLLRSQFKANHAEWVNSVKPNLG 301
Query: 347 YNVFERVLEAINTTQDN-IKILYKVRNEMRAALQRLLKDDKILVIPTVSDPP--LKLNTK 403
+ E + A+ + D ++ VR E ++AL LLKD IL IPTV PP + + +
Sbjct: 302 PGLRENIHGAVASGDDEPLEEFLAVRAEFKSALAALLKDHGILAIPTVPGPPPMVGIQAQ 361
Query: 404 KTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLY 463
+ R L I +SG CQV+IP+GK N P+S+S + HG D FLL+ +LY
Sbjct: 362 AAPLDNYQARAFSLLDIAVVSGFCQVSIPLGKRNGLPVSVSLVARHGADHFLLNVAEELY 421
Query: 464 DSLQEQ 469
+L ++
Sbjct: 422 QTLIDE 427
>gi|222628276|gb|EEE60408.1| hypothetical protein OsJ_13590 [Oryza sativa Japonica Group]
Length = 416
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 188/427 (44%), Positives = 247/427 (57%), Gaps = 26/427 (6%)
Query: 45 GRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHE 104
GR D+GAF+ERF L P P + PL GL FAIKD+FD+ G VTGFG+PDW R H
Sbjct: 7 GRGDYGAFMERFVLPPPPS-----QQLPLHGLTFAIKDIFDIAGRVTGFGNPDWARTHAP 61
Query: 105 AERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAV 164
A T+ VV I GEN HYGTP NP P +PGGSSSGSAV
Sbjct: 62 AAATSPVVLA-------------------AINGENTHYGTPTNPCAPGRVPGGSSSGSAV 102
Query: 165 AVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
AVAA LVDF+LGTDT G VRVPA++CGI G RPSHG VS V+P +Q DTVG +R+
Sbjct: 103 AVAANLVDFSLGTDTGGSVRVPAAYCGIFGLRPSHGLVSAENVIPMAQMFDTVGWFSRDL 162
Query: 225 SILHRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEH 284
S L RV VLL L ++ ++ D FQ+ +T +I+ ++ Q ++
Sbjct: 163 STLSRVTKVLLPLPDDIVKQPTQVTIPMDCFQILGSLDDRTYQIINASVAKRFDSQILDN 222
Query: 285 MNVGQYIASNVPSL-KGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKP 343
N+G +I+ NVPS+ K + S S L +S VM LQR +FK + EWV + KP
Sbjct: 223 RNLGDFISDNVPSIGKFITDFSESELPSVPALSVISHVMRGLQRSQFKANHAEWVNTVKP 282
Query: 344 RLGYNVFERVLEAINT-TQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNT 402
LG + ER+LEAI + ++++ +R E ++AL LLKD IL IPTV PP K+
Sbjct: 283 NLGPGLRERILEAIASGDNESLEDFQAIRAEFKSALAALLKDHGILAIPTVPGPPPKVGM 342
Query: 403 KKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDL 462
+ F R L SI +SG CQV+IP+G N P+S+S + HG D FLL+ V +L
Sbjct: 343 EAAPLENFRARAFSLLSIAGLSGFCQVSIPLGMRNGLPVSVSLVARHGADHFLLNVVEEL 402
Query: 463 YDSLQEQ 469
Y +L ++
Sbjct: 403 YQTLIDE 409
>gi|168042567|ref|XP_001773759.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674874|gb|EDQ61376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 402
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 165/398 (41%), Positives = 234/398 (58%), Gaps = 13/398 (3%)
Query: 84 FDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYG 143
FDV+ +TGFGS DW++ H A +TAV + +L++GA C GK +DEF + G NK G
Sbjct: 4 FDVESAITGFGSQDWEQTHAPATQTAVAIGRILQSGAACTGKQTMDEFGLSMFGRNKRDG 63
Query: 144 TPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVS 203
NP +P + GG++SGS VAVA+ DFAL DTIG VR PASFCGI GYR SH +S
Sbjct: 64 IAENPVVPKYFAGGAASGSGVAVASNTCDFALALDTIGGVRNPASFCGIFGYRASHEAIS 123
Query: 204 MIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKL 263
+GV P S SLD VG+L+R+ +LH+V +LLQ +E ++ ADD F S + +
Sbjct: 124 TVGVTPVSPSLDAVGVLSRDVHVLHQVVKLLLQQPDLERGLPSSVLVADDCFSQSSISTV 183
Query: 264 KTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKG-------LRAQSTSPENGTATLK 316
+T +I++A+ G H+N+G IAS+VP+L+ L Q TS T
Sbjct: 184 RTADLIARAVSETLGRSLVHHVNLGALIASSVPTLRNFLMEEERLLKQDTSRYT---TFD 240
Query: 317 ALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNI-KILYKVRNEMR 375
L ML + RY+F+ + +W K P L +V RV A+ D + K+ K++ E R
Sbjct: 241 GLRDAMLLILRYKFRDKHRKWFKDVDPELSSDVDVRVKFAMAPYIDGLHKMALKIKEETR 300
Query: 376 AALQRLLKDDKILVIP-TVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIG 434
AA+ +L D +LV+P T S PPLK K F R L + S+ SMSGCCQV +P+G
Sbjct: 301 AAMNEILLMDSLLVMPSTPSLPPLKEAKGKELEI-FESRALSMLSLASMSGCCQVTVPLG 359
Query: 435 KYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNI 472
PIS+S + HGGD FLL+++++L +Q +V++
Sbjct: 360 SARGIPISVSVLARHGGDMFLLESLMELNARIQMEVDV 397
>gi|168031234|ref|XP_001768126.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680564|gb|EDQ66999.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 406
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 164/398 (41%), Positives = 230/398 (57%), Gaps = 13/398 (3%)
Query: 84 FDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYG 143
+DV+ VTGFGS DW++ H A +TAV + ++K GA GK +D+F + G N G
Sbjct: 4 YDVESVVTGFGSYDWEQTHAPATQTAVAIDSVIKAGAVSTGKQTMDDFGLSMFGRNWRDG 63
Query: 144 TPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVS 203
NP P H GG++SGS VAVA+ VDFAL D+IG VR+PA+FCGI GYR SHG +S
Sbjct: 64 PAENPVAPKHFSGGAASGSGVAVASNAVDFALAIDSIGGVRIPAAFCGIFGYRASHGVIS 123
Query: 204 MIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKL 263
GV + SLD VG+ +R+ +LH+V VLL+ +E ++ ADD F LS + +
Sbjct: 124 TAGVTAVAPSLDVVGVFSRDPYVLHQVVKVLLKQPELEWGSPAEVLIADDCFGLSTISSV 183
Query: 264 KTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKG-------LRAQSTSPENGTATLK 316
+T ++++A+ G H+N+G +IASNVP+L+ L Q TS +T
Sbjct: 184 RTADLLARAVSDTIGRSLIHHVNLGTHIASNVPTLRNFLMEEERLLQQDTSR---YSTYD 240
Query: 317 ALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNI-KILYKVRNEMR 375
L M+ + R EFK + +W + P L +V RV A+ D + ++ KV++E R
Sbjct: 241 GLRDAMILILREEFKEKHRKWFEDVNPELAPDVDVRVKFAMAPHLDGLHRLALKVKDETR 300
Query: 376 AALQRLLKDDKILVIP-TVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIG 434
AA+ LL D +LVIP T S PP K K F R L + SI SMSGCCQV +PIG
Sbjct: 301 AAMNELLLTDTLLVIPSTPSLPPSKAARGKELEF-FESRALSILSIASMSGCCQVTVPIG 359
Query: 435 KYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNI 472
PIS+S + GGD FLLD+++ L LQ +V++
Sbjct: 360 DVRGIPISVSLMARCGGDLFLLDSLIKLNPKLQLEVDV 397
>gi|308809489|ref|XP_003082054.1| chloroplast Toc64-2 (ISS) [Ostreococcus tauri]
gi|116060521|emb|CAL55857.1| chloroplast Toc64-2 (ISS) [Ostreococcus tauri]
Length = 612
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 173/492 (35%), Positives = 258/492 (52%), Gaps = 16/492 (3%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEA-ERTAVVVTLLLKNGATCIGKTVLDE 130
PL G+KFA+KD+FDV+G GFGSP ++ E +R A V +L GA+ IG T +DE
Sbjct: 68 PLRGMKFAVKDIFDVRGRRCGFGSPAFEATAGETPKRNAECVDDVLNAGASAIGMTTMDE 127
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQL--VDFALGTDTIGCVRVPAS 188
A+ + GEN HY TP+NP+ + IPGGSSSGSAVA A L DFALGTDT G VR+PAS
Sbjct: 128 LAYAVNGENPHYRTPINPRARNLIPGGSSSGSAVACAGALRGCDFALGTDTGGSVRIPAS 187
Query: 189 FCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLL-QLNAVEPRR-AR 246
+CG+ G R SHG VSM GV + S DTVG AR+ +L RVG VLL + P + +
Sbjct: 188 YCGVFGIRTSHGLVSMRGVQALAPSFDTVGWFARSIDVLRRVGDVLLPSADEHAPTKPSA 247
Query: 247 RLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQST 306
+ D + P + V + A + MN+ +++ P + L +
Sbjct: 248 WYLLEDSVSDKRSSPHAQCAAVAAVAALNEIDRGKFRRMNLTEHLLVGCPKFQALVGRRE 307
Query: 307 SPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKI 366
+ G L+ + V + + +E W K +P L V R+ A + +++
Sbjct: 308 --DCGLDCLREVLRVTMGAEIWEN---LGPWYKKEQPVLDPAVEGRLEAAAKLSPTQVEL 362
Query: 367 LYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGC 426
++R E+R + RLL + +LV+PT + + + E+ + L+ I S+ G
Sbjct: 363 FKEIREEVRETMDRLLDNGVVLVLPTTPGKAPERGLGEKATEEWRKKCFELTCIASLCGL 422
Query: 427 CQVAIPIGKYN-EHPISISFITYHGGDKFLLDTVLDLYDSLQEQVN--IASNLVPLPDTN 483
QV+IP+ N E P +S I + D+ L+D DL L + + + L+ L N
Sbjct: 423 PQVSIPLIAPNVEGPQGLSLIGGYQTDRMLMDAARDLVVELVDAYPDILEAELLRL---N 479
Query: 484 GSIDASELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQQAE 543
+ + K KGN A K ++ A+ YY AI N + Y +NRA A+L+LG ++ E
Sbjct: 480 PPREPGDAEKAKGNEALKKGKYQDAIEYYGVAIGKNPKNPVYVANRAMAHLKLGNYELCE 539
Query: 544 EDCSKTISLDKK 555
+DC+ I LD+K
Sbjct: 540 DDCTTAIKLDRK 551
>gi|38344119|emb|CAE01726.2| OSJNBb0050O03.16 [Oryza sativa Japonica Group]
Length = 345
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 157/338 (46%), Positives = 203/338 (60%), Gaps = 4/338 (1%)
Query: 48 DFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAER 107
DFGAF+ERF + P PPP + + PL GL FAIKD+FD+ G VTGFG+PDW R H A
Sbjct: 4 DFGAFMERF--VLPPPPPPSSQQLPLHGLTFAIKDIFDIAGRVTGFGNPDWARTHAPAAA 61
Query: 108 TAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVA 167
T+ VV L GAT +G T++DE A+ I GEN HYGTP NP P +PGGSSSGSAVAVA
Sbjct: 62 TSPVVLAALAAGATSLGTTIMDEMAYSIYGENAHYGTPANPCAPGRVPGGSSSGSAVAVA 121
Query: 168 AQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASIL 227
A LVDF+LGTDT G VRVPA++CGI G R SHG VS V+P +Q DTVG AR+ S L
Sbjct: 122 ANLVDFSLGTDTGGSVRVPAAYCGIFGLRTSHGLVSAQNVIPMAQMFDTVGWFARDLSTL 181
Query: 228 HRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNV 287
RV VLL L + + D FQ+ P T +++ ++ G ++ N+
Sbjct: 182 SRVTKVLLPLPDDTVKHPTHVTIPMDCFQILGSPDDHTYQIVNASVAKKFGSHAIDNANL 241
Query: 288 GQYIASNVPSLKGLRAQSTSPE-NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLG 346
G +++ NVPS+ A + E L +S VM SL R +FK + EWV S KP LG
Sbjct: 242 GDFVSDNVPSIGKFIADFSESELPSVPALSVISHVMFSLLRSQFKANHAEWVNSVKPNLG 301
Query: 347 YNVFERVLEAINTTQDN-IKILYKVRNEMRAALQRLLK 383
+ E + A+ + D ++ VR E ++AL LLK
Sbjct: 302 PGLRENIHGAVASGDDEPLEEFLAVRAEFKSALAALLK 339
>gi|148909975|gb|ABR18072.1| unknown [Picea sitchensis]
Length = 274
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 125/222 (56%), Positives = 158/222 (71%)
Query: 334 YEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTV 393
+EEW+ S KP LG + RV A+ T +NI K ++E R AL LLKDD IL IPT
Sbjct: 3 HEEWINSVKPDLGPGISARVRAALETNNENIGHCLKAKDEAREALNALLKDDAILFIPTT 62
Query: 394 SDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDK 453
P KLN K+ +FH R L SI MSGCCQV+IP+G++++ P+++S + HGGD+
Sbjct: 63 PGPAPKLNMKQNLLDDFHIRAFTLLSIAGMSGCCQVSIPVGQHDKCPLAVSLMARHGGDR 122
Query: 454 FLLDTVLDLYDSLQEQVNIASNLVPLPDTNGSIDASELLKEKGNAAFKGKQWNKAVNYYS 513
FLLDTV +Y +LQE+V IAS+ P NG I+A+++ KEKGNAA+K KQW KA+N+YS
Sbjct: 123 FLLDTVRAMYPTLQEEVKIASSTQPTTSVNGKIEAADIAKEKGNAAYKDKQWQKAINFYS 182
Query: 514 EAIKLNGTSATYYSNRAAAYLELGCFQQAEEDCSKTISLDKK 555
EAIKLNG +ATYYSNRAAAYLELG F QAEEDC+ I LDKK
Sbjct: 183 EAIKLNGKNATYYSNRAAAYLELGSFAQAEEDCTAAIDLDKK 224
>gi|449534003|ref|XP_004173959.1| PREDICTED: outer envelope protein 64, mitochondrial-like, partial
[Cucumis sativus]
Length = 175
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 123/175 (70%), Positives = 142/175 (81%)
Query: 1 MSKSFNIIKTNTSNPKVWVVIGVSVVGFVVLAETLRRRRNPKLNGRVDFGAFLERFELIP 60
MS ++KTN SNPK+W++IGV V G V+LAET RR RN K+ DFGAF++RFEL P
Sbjct: 1 MSNPLKLLKTNASNPKLWILIGVGVAGVVILAETRRRGRNGKVLQGEDFGAFIQRFELRP 60
Query: 61 FPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGA 120
FPQP PPAARQ LAGL FA+KDVFDVK YVTGFG+PDWKR H AE+T +VTLLLKNGA
Sbjct: 61 FPQPSPPAARQSLAGLTFAVKDVFDVKDYVTGFGNPDWKRTHDVAEKTDEMVTLLLKNGA 120
Query: 121 TCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFAL 175
C+GKTV+DE FGITGENK YGTP NP++ S +PGGSSSGSAVAVA +LVDFAL
Sbjct: 121 ACVGKTVMDELGFGITGENKQYGTPTNPKLSSFVPGGSSSGSAVAVAGELVDFAL 175
>gi|145352000|ref|XP_001420347.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580581|gb|ABO98640.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 576
Score = 261 bits (668), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 179/498 (35%), Positives = 262/498 (52%), Gaps = 33/498 (6%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAE-----RTAVVVTLLLKNGATCIGK 125
+PL +KF +KD+FD++G GFGSP +KR + R A V LL+ GA+ +G
Sbjct: 38 RPLKNVKFVVKDIFDIEGRRCGFGSPAFKRTGGKGGTAGAKRHARCVRTLLEAGASAVGM 97
Query: 126 TVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQL--VDFALGTDTIGCV 183
T +DE A+ I GEN HYGTP+NP+ + +PGGSSSGSAVA AA L +FALGTDT G V
Sbjct: 98 TTMDELAYAINGENAHYGTPINPRARALVPGGSSSGSAVACAAALRGCEFALGTDTGGSV 157
Query: 184 RVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLL-QLNAVEP 242
RVPAS+CG+ G R SHG+VSM GV + S DTVG AR+ +L RVG VLL + + P
Sbjct: 158 RVPASYCGVYGIRTSHGSVSMRGVQALAPSFDTVGWFARSIDVLQRVGDVLLPEPDKHAP 217
Query: 243 RRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLR 302
R + +D + +H I+ A + + MN+ +++ P + L
Sbjct: 218 TEPSRWLLLEDACAAVAA--VTALHEIAPA--------DFKRMNLTEHLLVGCPKFRSL- 266
Query: 303 AQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQD 362
+ + G L+ + V++ + +E +W KP+LG V R+ A D
Sbjct: 267 -VNGREDYGLDCLREMVRVLMGAEIWEN---LGKWYTEEKPKLGAAVKARMEAASKLDAD 322
Query: 363 NIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGS 422
++ L +VR E+R + R+L I ++PT K + + + L I S
Sbjct: 323 EVERLKEVREEVREEVDRILDGGAIFILPTTPGKAPKRGQSDQATESWRRKCFELLCIAS 382
Query: 423 MSGCCQVAIPIGKYN-EHPISISFITYHGGDKFLLDTVLDLYDSLQEQVN--IASNLVPL 479
+ G QV+IP+ N E P +S I + DK L+ + +L E + + L L
Sbjct: 383 LCGLPQVSIPLEAPNIEGPQGLSLIAGYQMDKMLIGAARQIVPALVEAYPDILEAELERL 442
Query: 480 --PDTNGSIDASELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELG 537
P+ G E K KGN A K ++ A+ YYS AI N S + +NRA A+L+LG
Sbjct: 443 NPPEAPG-----ESEKTKGNEALKQGKYQDAIEYYSVAIGKNPKSKIFVANRAMAHLKLG 497
Query: 538 CFQQAEEDCSKTISLDKK 555
+Q AE+DC++ I LD +
Sbjct: 498 NYQLAEDDCTEAIKLDAR 515
>gi|381166975|ref|ZP_09876188.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related
amidase [Phaeospirillum molischianum DSM 120]
gi|380684027|emb|CCG41000.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related
amidase [Phaeospirillum molischianum DSM 120]
Length = 409
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 155/393 (39%), Positives = 214/393 (54%), Gaps = 32/393 (8%)
Query: 68 AARQ-PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKT 126
ARQ PLAGL FA KDVFD+ GYVTG G+PDW+R A +TA V+ LL++GA +GKT
Sbjct: 36 GARQGPLAGLTFAAKDVFDIAGYVTGAGNPDWRRLAEPARQTAWAVSALLESGARLVGKT 95
Query: 127 VLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
DE GI G+N HYGTP NP+ P H+PGGSSSGSAVAVA L D ALGTDT G RVP
Sbjct: 96 HTDELTRGIFGDNSHYGTPENPRAPGHVPGGSSSGSAVAVAGGLADMALGTDTAGSTRVP 155
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRAR 246
ASFCG+ G RP+ G + M GVL S + DTVGLLA + +L R+G VLL+ AR
Sbjct: 156 ASFCGVFGLRPTLGLIPMDGVLGQSNTFDTVGLLAADPDVLARMGEVLLRKKVGNQHPAR 215
Query: 247 RLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNV-PSLKGLRAQS 305
++ D + P+ ++ AIE+ V IA V P ++G R
Sbjct: 216 AVVLEDTMEAAD--PE------VAAAIEA-----------VLPRIAETVAPVVRGTR--- 253
Query: 306 TSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIK 365
SP L ++Q E ++ +W+ + PR G+ V + L +
Sbjct: 254 ISP----VPLPDWIEPQNAIQGREAWEVFGDWINRSNPRFGFEVADNFLRGSRVANRTLS 309
Query: 366 ILYKVRNEMRAALQRLLKDDKILVIPT--VSDPPLKLNTKKTYSAEFHDRTLVLSSIGSM 423
R R + L+ +LV+PT V+ PP++ + ++ + R + L++I M
Sbjct: 310 SSRGFRLRARRWVLDALEGHAVLVLPTTPVTAPPVQ--SPRSEMWDIRSRIISLTTIAGM 367
Query: 424 SGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+GC Q+++P+ N P+ +S I GGD LL
Sbjct: 368 AGCPQISLPLCTVNGRPVGVSLIGPRGGDSLLL 400
>gi|384249168|gb|EIE22650.1| amidase [Coccomyxa subellipsoidea C-169]
Length = 405
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 151/389 (38%), Positives = 206/389 (52%), Gaps = 15/389 (3%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA PL GL FA KD++DV+ YVTGFG+P WK H A TA V LL GA+ +GKT
Sbjct: 19 AAEGPLQGLTFAAKDLYDVENYVTGFGNPTWKETHEPATATAPAVQALLSAGASLVGKTH 78
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
+DE A+ + GEN HYGTPVNP P IPGGSSSGS VAVA + VD ALG+DT G VRVPA
Sbjct: 79 MDELAYSLNGENFHYGTPVNPACPDRIPGGSSSGSVVAVANESVDIALGSDTGGSVRVPA 138
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
S+CG G RP+HG VS+ G + S DT G ARNA +L R G VLL + +R
Sbjct: 139 SYCGAWGIRPTHGRVSLEGACTLAASYDTGGFFARNAELLRRAGDVLLDPATRSDVQFKR 198
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
+ A D F L+ + I + + + + Y ++P A +T
Sbjct: 199 WLVAKDAFDLADDATSEAIFRVGLI----------DLVFLDSYHRFSLPV-----ACTTK 243
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
+ + + V Q E EWV+SA+P+LG ER A T + +
Sbjct: 244 TASCSEGFELACCVFRVSQGAEVWEALGEWVQSAQPQLGPGTKERFEMASQLTTEEVARA 303
Query: 368 YKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCC 427
++R + L++LL +D +L +P+ P LNT + F R + L+ I +SG
Sbjct: 304 NELRARITQHLEQLLGEDGVLAVPSAPGPAPFLNTPQQDLDTFRKRLISLTCIAGLSGLP 363
Query: 428 QVAIPIGKYNEHPISISFITYHGGDKFLL 456
QV++P+ K P+ + I G D+ LL
Sbjct: 364 QVSLPVAKVEGCPVGLGLIGPRGSDEALL 392
>gi|412987786|emb|CCO19182.1| amidase [Bathycoccus prasinos]
Length = 669
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 181/581 (31%), Positives = 280/581 (48%), Gaps = 71/581 (12%)
Query: 48 DFGAFLERFELIPFPQPPPPAAR--QPLAGLKFAIKDVFDVKGY------VTGFGSPDWK 99
D GAF+E ++ P PPPP + LA LKF +KD+F+V G GFGSP WK
Sbjct: 46 DCGAFVE---IVDIPCPPPPEKHVVRKLANLKFVLKDIFEVSGRKGENDSSCGFGSPKWK 102
Query: 100 RDHHEAE---------------RTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGT 144
E + A ++ +LLKNGA+ +G T +DE A+ I G+N+HYGT
Sbjct: 103 EFMKEKRENSNSNGNNAGVHRVKNAAIMDMLLKNGASLVGITHMDELAYSIDGQNEHYGT 162
Query: 145 PVNPQMPSHIPGGSSSGSAVAVAAQL--VDFALGTDTIGCVRVPASFCGILGYRPSHGTV 202
P+NP +PGGSSSGSAVAVA++L DF +GTD+ G VRVPA++CG+ G+RPSHG V
Sbjct: 163 PINPAADKRLPGGSSSGSAVAVASRLRDCDFGIGTDSAGSVRVPAAYCGVYGFRPSHGMV 222
Query: 203 SMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP---RRARRLIFADDIFQLSK 259
S G +++ DTVG A+ + L VG VLL+ E + ++ D+ +L+
Sbjct: 223 STKGCQDFAKTFDTVGWFAKGSKTLKDVGDVLLKPADDEKYGIKEPKQFAILTDLMKLAD 282
Query: 260 VPKLKTIHVISKAIESLSGYQNP-EHMNVGQYIASNVPSLKGLRAQSTSPENGTATLKAL 318
+ KA Y +++G+ + PSL+ + T E + A
Sbjct: 283 PQGSAAVASALKAFGYDDRYAGKVSKLDLGERLKMLCPSLRTDTSGKTGLELIRDKMHAT 342
Query: 319 SSVMLSLQRYEFKTIYEEWVKSAKPR-------------------LGYNVFERVLEAINT 359
+ EF E+ S + LG +R+ A
Sbjct: 343 MGFEIHEALKEFLAFLEKQDGSDQATATATATISNKTTTTTTTSGLGKFTAQRIENAKKI 402
Query: 360 TQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSD-PPLKLNTKKTYSAEFHDRTLVLS 418
T+ + + L KVR E+R + +++ + +L+ PTV P++ + + +T
Sbjct: 403 TEQDYENLMKVRGEIREVMDQIMDNGTVLIFPTVPGVAPMREGRSEEEVQAWRMKTFQFL 462
Query: 419 SIGSMSGCCQVAIPIGKY--NEHPISISFITYHGGDKFLLDTVLDLYDSLQEQV------ 470
+I S G QVAIP+ +Y E P S+S + DK LL+ +QE
Sbjct: 463 AIASFCGLPQVAIPL-RYPDAEGPHSVSLLGGFQTDKMLLECAFRYSAQMQEHFPNYVIT 521
Query: 471 -NIASNLVPLPDTNGSIDASELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNR 529
+ SN P P G E K GN AF ++ A+++Y +A++ A YY+NR
Sbjct: 522 EMMKSN--PAPKVPG-----EEEKVNGNKAFAEGKYEDAISWYDKALEKKKLPA-YYANR 573
Query: 530 AAAYLELGCFQQAEEDCSKTISLDKK-VRARVGYVDCSMLI 569
A YL++G ++ E+DC++ + +D K V+A + M++
Sbjct: 574 ALVYLKMGKMEEVEKDCTEALEMDGKYVKAYLRRAKARMIL 614
>gi|384048378|ref|YP_005496395.1| peptidase M22, glycoprotease [Bacillus megaterium WSH-002]
gi|345446069|gb|AEN91086.1| Peptidase M22, glycoprotease [Bacillus megaterium WSH-002]
Length = 399
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 150/404 (37%), Positives = 216/404 (53%), Gaps = 32/404 (7%)
Query: 66 PPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGK 125
PP L L FA+KDVFDV+G+++ G+PDW H A A VV LLK GA G
Sbjct: 16 PPTGTGMLNNLSFALKDVFDVQGHISSAGNPDWLATHQPASEHADVVAALLKEGAALKGV 75
Query: 126 TVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
T DE +G+ GEN HYGTPVNP+ IPGGSSSGSAVAVAA + DFA+GTDT G VR+
Sbjct: 76 THTDELMYGLNGENAHYGTPVNPKSADRIPGGSSSGSAVAVAAGITDFAIGTDTGGSVRI 135
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRA 245
P+S+CGI GYRPSHG +S G++P + S DTVG++AR+ L +VG VLL ++
Sbjct: 136 PSSYCGIFGYRPSHGRISTNGLIPLAPSFDTVGVMARDGHTLQKVGSVLLNSTSLV-SGF 194
Query: 246 RRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQS 305
RL D+ +L V +++++L+ P +K +
Sbjct: 195 TRLYVPTDVMEL----------VDEQSMQALA------------------PPIKHVMKSF 226
Query: 306 TSPENGTATLKALSSVMLSLQRYEFKTIYE---EWVKSAKPRLGYNVFERVLEAINTTQD 362
++ E + S+ M + + + K I++ EW++ P G ++ R A T
Sbjct: 227 STTEEIVIAPQGFSTYMETFRLLQGKEIWQMHGEWIQKENPTFGDDIGSRFQWASTLTLL 286
Query: 363 NIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGS 422
N+ + + R E+R + L +D ILV+PT P + K RTL ++ I
Sbjct: 287 NMNYIEEKRRELRYFMYSQLGEDGILVLPTSPGPAPVKDAKGPELENRRLRTLQMTCIAG 346
Query: 423 MSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSL 466
+SG QV IP G+ + PI +SFI + D+ LL+ V + D +
Sbjct: 347 LSGLPQVTIPAGELDGLPIGLSFIAGYNQDEKLLNWVKENSDRI 390
>gi|294497803|ref|YP_003561503.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus megaterium
QM B1551]
gi|294347740|gb|ADE68069.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus megaterium
QM B1551]
Length = 399
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 149/404 (36%), Positives = 215/404 (53%), Gaps = 32/404 (7%)
Query: 66 PPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGK 125
PP L L FA+KDVFDV+G+++ G+PDW H A A VV LLK GA G
Sbjct: 16 PPTGTGMLNNLSFALKDVFDVQGHISSAGNPDWLATHQPASEHADVVAALLKEGAVLKGV 75
Query: 126 TVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
T DE +G+ GEN HYGTP+NP+ IPGGSSSGSAVAVAA + DFA+GTDT G VR+
Sbjct: 76 THTDELMYGLNGENAHYGTPINPKSADRIPGGSSSGSAVAVAAGITDFAIGTDTGGSVRI 135
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRA 245
P+S+CGI GYRPSHG +S G++P + S DTVG++AR+ L +VG VLL +
Sbjct: 136 PSSYCGIFGYRPSHGRISTNGLIPLAPSFDTVGVMARDGHTLQKVGAVLLN-STSRASGF 194
Query: 246 RRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQS 305
RL D+ +L V +++ +L+ PS+ +
Sbjct: 195 TRLYVPTDVMEL----------VDEQSMRALA------------------PSINHVMESF 226
Query: 306 TSPENGTATLKALSSVMLSLQRYEFKTIYE---EWVKSAKPRLGYNVFERVLEAINTTQD 362
++ E + S+ M + + + K I++ EW++ P G ++ R A T
Sbjct: 227 STIEEIAIAPQGFSTYMETFRLLQGKEIWQTHGEWIQKENPTFGEDIGSRFQWASTLTLL 286
Query: 363 NIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGS 422
N+ + + R E+R + L ++ ILV+PT P +TK RTL ++ I
Sbjct: 287 NMNYIEEKRRELRYFMYSQLGEEGILVLPTAPGPAPVKDTKGLELENRRLRTLQMTCIAG 346
Query: 423 MSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSL 466
+SG QV IP G+ + PI +SFI + D+ LL+ V + D +
Sbjct: 347 LSGLPQVTIPAGELDGLPIGLSFIAGYSQDEKLLNWVKENSDRI 390
>gi|452991628|emb|CCQ97050.1| Amidase 1 [Clostridium ultunense Esp]
Length = 401
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 150/419 (35%), Positives = 220/419 (52%), Gaps = 31/419 (7%)
Query: 47 VDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAE 106
D+ AF++ +I P L GL FA+KDVF +KGY G G+PDW R H AE
Sbjct: 3 ADWNAFVQEDVIIE------PYKDGRLRGLTFAVKDVFAIKGYTNGAGNPDWLRTHKPAE 56
Query: 107 RTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAV 166
+ AVVV LLL GA G T DE F + GEN HYGTP+NP+ P IPGGSSSGSAVAV
Sbjct: 57 KNAVVVDLLLAQGARLKGITHTDELMFSLNGENYHYGTPINPKAPGCIPGGSSSGSAVAV 116
Query: 167 AAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASI 226
A+ VDFALGTDT G VR+P+++CGI G+RP+HG+V + GV+P +QS DTVG +AR+A
Sbjct: 117 ASGSVDFALGTDTGGSVRIPSAYCGIYGFRPTHGSVPLDGVIPLAQSFDTVGWMARDAKT 176
Query: 227 LHRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMN 286
L RVG L ++++F D +++ + K+ +S+ ++ N
Sbjct: 177 LLRVGEALFDGMEDTEGEFQQILFGRDAWEMVEEDCRKSF------FKSIPLFERMTEKN 230
Query: 287 VGQYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLG 346
++I + +P+ L L ++Q YE + + +W++ PR G
Sbjct: 231 --EWI-------------TVAPQG----LPELFKTFRTIQGYEIWSNHGKWIRDENPRFG 271
Query: 347 YNVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTY 406
++ ER + + ++ + R+ + LL +++LVIPT S P K
Sbjct: 272 PDIAERFAWTSTLSDSEYEKARPLQEQFRSYMHELLGSNRLLVIPTSSCTPPKRGLTGDQ 331
Query: 407 SAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDS 465
+ RTL L+ I +S QV +P+ P IS I + D LL V + + +
Sbjct: 332 VEDRRTRTLQLTCIAGLSELPQVTLPMEDEEGLPFGISIIAGYRQDLKLLSWVHEKWSA 390
>gi|2342685|gb|AAB70409.1| Contains similarity to Rhodococcus amidase (gb|D16207). ESTs
gb|T20504,gb|H36650,gb|N97423,gb|H36595 come from this
gene [Arabidopsis thaliana]
Length = 273
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 140/284 (49%), Positives = 173/284 (60%), Gaps = 30/284 (10%)
Query: 48 DFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAER 107
DFGAF+E+ + ++ L GL FAIKD+FDV+G VTGFG+PDW R H A
Sbjct: 6 DFGAFIEK---VTISPTSTSSSPPSLQGLTFAIKDIFDVEGRVTGFGNPDWLRTHSAATS 62
Query: 108 TAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVA 167
TA VV+ LL+ GAT +G T++DE A+ I GEN HYGTP NP +PGGSSSGSAVAVA
Sbjct: 63 TAPVVSSLLEAGATALGITIMDEMAYSINGENAHYGTPRNPIAFDRVPGGSSSGSAVAVA 122
Query: 168 AQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASIL 227
A+LVDF++GTDT G VRVPAS+CGI G+RPSHG VS +G+ P +QS DTVG AR+ + L
Sbjct: 123 ARLVDFSIGTDTGGSVRVPASYCGIFGFRPSHGAVSTVGLTPMAQSFDTVGWFARDTATL 182
Query: 228 HRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNV 287
RVG VLLQ + + P +LI ADD F+L VP + +
Sbjct: 183 KRVGCVLLQQHHLNPIEPSQLIIADDCFKLCSVPHDLLVQPL------------------ 224
Query: 288 GQYIASNVPSLKGLRAQ---STSPENGTATLKALSSVMLSLQRY 328
NVPSLK +T E +L ALSS M LQRY
Sbjct: 225 ------NVPSLKHFMTSDDVTTQQEFCIPSLMALSSSMRLLQRY 262
>gi|295703180|ref|YP_003596255.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus megaterium
DSM 319]
gi|294800839|gb|ADF37905.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus megaterium
DSM 319]
Length = 399
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 145/397 (36%), Positives = 210/397 (52%), Gaps = 32/397 (8%)
Query: 66 PPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGK 125
PP L L FA+KDVFDV+G+++ G+PDW H A A VV LLK GA G
Sbjct: 16 PPTGTGMLNNLSFALKDVFDVQGHISSAGNPDWLATHQPASEHADVVAALLKEGAALKGV 75
Query: 126 TVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
T DE +G+ GEN HYGTPVNP+ IPGGSSSGSAVAVAA + DFA+GTDT G VR+
Sbjct: 76 THTDELMYGLNGENAHYGTPVNPKSADRIPGGSSSGSAVAVAAGITDFAIGTDTGGSVRI 135
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRA 245
P+S+CGI GYRPSHG +S G++P + S DTVG++AR+ L +VG VLL
Sbjct: 136 PSSYCGIFGYRPSHGRISTNGLIPLAPSFDTVGVMARDGHTLQKVGAVLLN--------- 186
Query: 246 RRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQS 305
S+V ++V + +E + Q + + PS+ +
Sbjct: 187 ----------STSRVSGFTRLYVPTDVMELVDE----------QSMRALAPSINHVMESF 226
Query: 306 TSPENGTATLKALSSVMLSLQRYEFKTIYE---EWVKSAKPRLGYNVFERVLEAINTTQD 362
++ E + S+ M + + + K I++ EW++ P G ++ R A T
Sbjct: 227 STIEEIAIAPQGFSTYMETFRLLQGKEIWQTHGEWIQKENPMFGEDIGSRFQWASTLTLL 286
Query: 363 NIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGS 422
N+ + + R E+R + L ++ IL++PT P + K RTL ++ I
Sbjct: 287 NMNYIEEKRRELRYFMYSQLGEEGILILPTAPGPAPVKDAKGPELENRRLRTLQMTFIAG 346
Query: 423 MSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTV 459
+SG QV IP G+ + P+ +SFI + D+ LL+ V
Sbjct: 347 LSGLPQVTIPAGELDGLPVGLSFIAGYNQDEKLLNWV 383
>gi|402300440|ref|ZP_10819942.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus
alcalophilus ATCC 27647]
gi|401724419|gb|EJS97783.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus
alcalophilus ATCC 27647]
Length = 390
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 148/393 (37%), Positives = 219/393 (55%), Gaps = 25/393 (6%)
Query: 67 PAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKT 126
P A L+G FA+KDVF ++GY + G+P+W H AE TA V+T+L NGA IG T
Sbjct: 17 PLATGILSGKSFAVKDVFAIEGYTSTAGNPNWFATHKPAEETAEVITILRNNGAKMIGTT 76
Query: 127 VLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
+ DE + + GEN HYGTPVNP+ P+ IPGGSSSGSA VAA LVDFA+GTDT G VR+P
Sbjct: 77 ITDELMYSLNGENIHYGTPVNPKAPTRIPGGSSSGSASVVAAGLVDFAIGTDTGGSVRIP 136
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRAR 246
+S+CGI G+RP+HG VS+ G++P ++S DTVG + + +L + +L+ R
Sbjct: 137 SSYCGIYGFRPTHGAVSVDGLIPLAKSFDTVGWMTEDKKLLIEIARLLISSQEKSESSFR 196
Query: 247 RLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQST 306
+L+F +D + L + N E + + + +P+ + + +
Sbjct: 197 KLLFPEDAWAL------------------VDKETNGELLKTIEKVKEVMPTHELIMLE-- 236
Query: 307 SPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKI 366
ENG +T K + + +Q YE + EWV + P+ G + ER A T++ K
Sbjct: 237 --ENGLSTWKEIFRI---IQGYEIWQEHGEWVSATNPQFGPGIKERFAMASKITEEEFKQ 291
Query: 367 LYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGC 426
+ K++ ++ L R+L +D +L++PTV LN + E +TL LS+I ++G
Sbjct: 292 MAKLQAVIKERLFRILTEDTLLIVPTVPGVAPLLNLPEDQVEERRSKTLQLSAIAGLAGL 351
Query: 427 CQVAIPIGKYNEHPISISFITYHGGDKFLLDTV 459
QV IPI E PIS+S I D LL+ V
Sbjct: 352 PQVTIPIDTNLEAPISVSIIAGPSQDIRLLEWV 384
>gi|402300179|ref|ZP_10819713.1| amidase [Bacillus alcalophilus ATCC 27647]
gi|401724661|gb|EJS98002.1| amidase [Bacillus alcalophilus ATCC 27647]
Length = 396
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 145/404 (35%), Positives = 211/404 (52%), Gaps = 28/404 (6%)
Query: 67 PAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKT 126
P + L+G FA+KDVFDVKG VTG G+PDW++ H A A VV L+ GA +G T
Sbjct: 18 PNKKGALSGASFAVKDVFDVKGVVTGAGNPDWEQTHLPATTHAKVVEQLINQGAKLVGTT 77
Query: 127 VLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
DE F + GEN HYGTPVNP+ P IPGGSSSGSAV VAA+LVDFA+GTDT G VR+P
Sbjct: 78 HTDELMFSLNGENVHYGTPVNPKAPERIPGGSSSGSAVVVAAELVDFAIGTDTGGSVRIP 137
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVG-HVLLQLNAVEPRRA 245
+S+CG+ G RP+HG VSM GV+P ++ DTVG +AR +L+ VG H+L Q+ P
Sbjct: 138 SSYCGVFGIRPTHGAVSMNGVIPLARYYDTVGWMARTPELLYEVGTHLLDQVENTNP--F 195
Query: 246 RRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQS 305
++I D+ L KLK + +E + +N YI
Sbjct: 196 SKVIIPQDVLALVD-EKLK--DPFANIVEQFQ-----QSINQVDYITL------------ 235
Query: 306 TSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIK 365
L+ + +LQ + + W++ P G ++ ER A T++ +
Sbjct: 236 -----AEGNLQNWLTTFRTLQGFGVWESHGNWIEKVNPNFGSDIAERFKWASTVTEEEAE 290
Query: 366 ILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSG 425
R ++R + LL +D ++++PT L T+ ++TL ++ I ++G
Sbjct: 291 EARLKREKIRQHVLELLGEDNVILMPTAPGVAPLLQTEGEGLEVQRNKTLQMTCISGLTG 350
Query: 426 CCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQ 469
+V +P+ N P+ +S I G D LL+ V + EQ
Sbjct: 351 FPEVTLPLLNINGTPVGLSIIAGPGQDLRLLNWVKNNITQQSEQ 394
>gi|251799861|ref|YP_003014592.1| amidase [Paenibacillus sp. JDR-2]
gi|247547487|gb|ACT04506.1| Amidase [Paenibacillus sp. JDR-2]
Length = 395
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 155/384 (40%), Positives = 210/384 (54%), Gaps = 27/384 (7%)
Query: 66 PPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGK 125
PP PL GL FA+KDVF +KGY +G G+PDW R H E+TA ++ LL +GA G
Sbjct: 16 PPVGEGPLRGLTFAVKDVFAIKGYTSGAGNPDWLRTHSPWEKTASSISKLLASGARLTGT 75
Query: 126 TVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
T DE + I G+N HYGTPVNP+ P IPGGSSSGSAVAVAA VDFALGTDT G VRV
Sbjct: 76 THTDELMYSINGQNDHYGTPVNPKAPDRIPGGSSSGSAVAVAAGAVDFALGTDTGGSVRV 135
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLL--QLNAVEPR 243
PA++CGI G+RP+H VS+ GV+P + S DTVG +AR+ S+L +VG VLL +A PR
Sbjct: 136 PAAYCGIYGFRPTHDFVSIDGVIPLAPSYDTVGWMARDISLLRQVGDVLLPGTTDAETPR 195
Query: 244 RA-RRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLR 302
+ RRLIFA++ ++ ++ K + + + G
Sbjct: 196 QDFRRLIFAEEAWEKAEPSCRKALGSVCIQLVQTEGMTQ--------------------E 235
Query: 303 AQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQD 362
+S +PE L+A S + Q E + EW+ KP G ++ R A +
Sbjct: 236 WRSVAPEG----LEAWSHAFRTTQGREIWQTHGEWIVREKPVFGESIGARFASASTISGA 291
Query: 363 NIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGS 422
+ +R +R L+ LL DD +L+IPT+ E RT+ LS I
Sbjct: 292 EAERDGALREIIRKRLRELLGDDGLLIIPTIPGTAPSRTIHGPAVEERRFRTMQLSCIAG 351
Query: 423 MSGCCQVAIPIGKYNEHPISISFI 446
+SG QV IP G+ + PI++S I
Sbjct: 352 LSGLPQVTIPAGEVDGAPIALSVI 375
>gi|223973013|gb|ACN30694.1| unknown [Zea mays]
Length = 292
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 130/271 (47%), Positives = 180/271 (66%), Gaps = 6/271 (2%)
Query: 8 IKTNTSNPKVWVVIGVSVVGFVVLAETLRRRRNPKLNGRVDFGAFLERFELIPFPQPPPP 67
+ ++ + +WV++G+ + G ++ A LRR D GAF+ R EL+P PQPPPP
Sbjct: 1 MASSGAAANLWVLLGLGIAGVLLAARRLRRPAR------PDHGAFVARLELLPPPQPPPP 54
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
A PL GL FAI D V GY+T FGS +W + H+ T+ VV+ L+ GA C+GKTV
Sbjct: 55 QAPHPLTGLCFAIADALHVSGYITSFGSLEWAKTHNAEVLTSSVVSALVDGGAICVGKTV 114
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
+DE A+ I GEN+++ TP NP P +PGG SSGSAVAVA +VDFALG D+IG VR+P
Sbjct: 115 IDEMAYSIHGENRYFDTPTNPAAPDRVPGGCSSGSAVAVAGGMVDFALGIDSIGGVRIPG 174
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
++CG+L +RPSH VS GV+P + SLDT+G A++ S+LHRVGH+LL+L R+ R
Sbjct: 175 AYCGVLAFRPSHAVVSNSGVIPVAPSLDTIGWFAKDPSVLHRVGHLLLRLPYAGIRQPRI 234
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSG 278
ADD F+LSK+P + V++K++E L G
Sbjct: 235 FYIADDCFELSKIPARRLTQVVTKSVEKLFG 265
>gi|317127613|ref|YP_004093895.1| amidase [Bacillus cellulosilyticus DSM 2522]
gi|315472561|gb|ADU29164.1| Amidase [Bacillus cellulosilyticus DSM 2522]
Length = 390
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 135/390 (34%), Positives = 209/390 (53%), Gaps = 28/390 (7%)
Query: 78 FAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITG 137
FA+KDVFD+KG G+PDW + H A A VV LL GA +G T+ DE + + G
Sbjct: 25 FAVKDVFDIKGIPASAGNPDWLKSHEPANSNAPVVEQLLAEGAALLGTTITDELMYSLNG 84
Query: 138 ENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRP 197
EN HYGTPVNP + +PGGSSSGSAVAVAA +VDF+LGTDT G +R+PA++CG G+RP
Sbjct: 85 ENMHYGTPVNPVEHTRVPGGSSSGSAVAVAANMVDFSLGTDTGGSIRIPAAYCGNFGFRP 144
Query: 198 SHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIFQL 257
+HG+V + G +P + S DTVG + ++ ++LH VG V+++ + + + +D ++L
Sbjct: 145 THGSVRIDGAIPLASSFDTVGWMTKDPALLHLVGQVIVKGDEHRNQAFDHVFLGEDCWEL 204
Query: 258 SKVPKLKTIHVISKA-IESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTATLK 316
+SK + +L Y + Y+ S + + G A+ L
Sbjct: 205 -----------VSKGMVHALKPYVH--------YVESELTATTGNVAKE--------GLM 237
Query: 317 ALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNEMRA 376
S+V +LQ E + EW++ +P ++ R A + ++R E+
Sbjct: 238 EWSNVFRTLQGLEIWKTHGEWIEKVQPEFAPDIRARFQWASALDPSLKEPNERMREEITE 297
Query: 377 ALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKY 436
A+Q+LL D IL+IPT D KL+ + + +T+ L+ I ++ QV +P+G
Sbjct: 298 AMQQLLGDHTILLIPTTPDIAPKLHLSENELEDRRTKTMQLTCIAGLAKLPQVTLPLGHT 357
Query: 437 NEHPISISFITYHGGDKFLLDTVLDLYDSL 466
+ P S+S + G D LL V + +L
Sbjct: 358 DGIPTSLSVVAGQGMDLPLLKWVKKHWPAL 387
>gi|226226445|ref|YP_002760551.1| putative amidase [Gemmatimonas aurantiaca T-27]
gi|226089636|dbj|BAH38081.1| putative amidase [Gemmatimonas aurantiaca T-27]
Length = 404
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 149/391 (38%), Positives = 200/391 (51%), Gaps = 26/391 (6%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
A PL GL F +KD FDV G+ TGFGSPDW R H A + V+ LL GA +GKT
Sbjct: 28 ATEGPLVGLTFGLKDNFDVAGHRTGFGSPDWFRTHPPAMQNTPVLDTLLAAGARMVGKTH 87
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
+E F +TGEN HYGTP+NP P +PGGSSSGSA AVA LVDFA+G+DT G VR PA
Sbjct: 88 TEEMTFSLTGENAHYGTPINPAAPDRVPGGSSSGSASAVAGGLVDFAIGSDTGGSVRAPA 147
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLL-QLNAVEPRRAR 246
SFCGI G RP+HG +S+ G P + DT G AR+ +L RVG VL A E
Sbjct: 148 SFCGIYGLRPTHGRISLAGACPLAPMFDTCGWFARDPELLRRVGQVLFASSGAHESGEPG 207
Query: 247 RLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQST 306
L++A D F +P + + A+ ++SG L LR +
Sbjct: 208 ALLYASDAFA-HTMPGVD--DALMPAVSAVSGV------------------LGALRPVTV 246
Query: 307 SPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKI 366
SP+ L A V LQ E + WV+ +P G + R A T ++
Sbjct: 247 SPDG----LPAWYEVFRVLQFGEIWKTHGGWVRQMRPTFGAQIAPRFEAASKVTVPEVEA 302
Query: 367 LYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGC 426
+ R ++ L LL D+ ++V+PTV D + + +R+L L I + G
Sbjct: 303 MTAERVRIQQRLDALLADNAVMVLPTVPDCAPRRGLPLPETVTVRERSLALLCIAGLGGL 362
Query: 427 CQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
Q+++P+ K PI +S I G D+ LLD
Sbjct: 363 PQLSMPLAKVEGGPIGLSLIAARGNDELLLD 393
>gi|56965491|ref|YP_177224.1| amidase [Bacillus clausii KSM-K16]
gi|56911736|dbj|BAD66263.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 388
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 138/391 (35%), Positives = 192/391 (49%), Gaps = 29/391 (7%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAG FA+KDVF VKGY G+PDW + A+ + + LL GA G V DE
Sbjct: 23 LAGKTFAVKDVFAVKGYTNSAGNPDWLKTAQPADADSPSIAKLLAAGADLRGMAVTDELM 82
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+ + GEN HYGTPVNP +PGGSSSGSAVAVAA+L DFA+GTDT G +R+P+S+CGI
Sbjct: 83 YSLNGENVHYGTPVNPYGADRVPGGSSSGSAVAVAAELTDFAIGTDTGGSIRIPSSYCGI 142
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G+RPSHG V + GV+P ++S DTVG +AR+ +L +G VLL VE +L+
Sbjct: 143 YGFRPSHGAVDISGVIPLAESFDTVGWMARDVELLKDIGTVLLGDQTVEEEAGEQLLID- 201
Query: 253 DIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGT 312
E+L G P + A + + R S + G
Sbjct: 202 ---------------------EALVGIAEPNVQALVLQAADRLGAKPISRWTSDRIDEGF 240
Query: 313 ATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRN 372
T + LQ E + EWV++AKP ++ R A Q + + +
Sbjct: 241 ETFR-------HLQAREIWRQHGEWVQAAKPAFAADIGARFQWASTLPQQELPLYKDKQT 293
Query: 373 EMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIP 432
M+ A + I+++PT + P K +T+ L+SI ++GC Q+ IP
Sbjct: 294 AMKRAFAADFAPNDIVLLPTAAGPAPKRGGSGQELEAIRAKTMKLTSIAGLAGCPQITIP 353
Query: 433 IGKYNEHPISISFITYHGGDKFLLDTVLDLY 463
PI +S I G D FLL L+
Sbjct: 354 FASVEGLPIGLSAIGCPGQDLFLLSWANRLF 384
>gi|168046070|ref|XP_001775498.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673168|gb|EDQ59695.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 306
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 127/306 (41%), Positives = 180/306 (58%), Gaps = 7/306 (2%)
Query: 84 FDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYG 143
FDV+ +TGFGSPDW+ H A +TA V+ L K GATCIGKT++DE F + G N+ G
Sbjct: 1 FDVEKKITGFGSPDWENSHEPAIKTAPVLVKLRKAGATCIGKTIMDEMGFCLLGANRWLG 60
Query: 144 TPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVS 203
TP NP S I GGSSSG+AV+V +++VDFA+G DT+G VRVPA+ CG+LG+R SHG +S
Sbjct: 61 TPENPFSTSRICGGSSSGAAVSVGSKVVDFAIGIDTVGDVRVPAACCGVLGFRSSHGAIS 120
Query: 204 MIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKL 263
+ G +P + S D VG ARNA +L VG L ++ + +R A D+F+LS V L
Sbjct: 121 LEGTIPVASSFDAVGWFARNAGLLRLVGRQLCPHVVMDGKGPKRFYMAHDVFKLSAVSHL 180
Query: 264 KTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSL----KGLRAQSTSPENGTATLKALS 319
+T V++++++ G ++N +Y+ + P++ K L TA L L
Sbjct: 181 RTADVLARSVQRTVGRHTLCNLNFIEYLEDHAPAIQTFKKELERMGLDSSQYTA-LDVLR 239
Query: 320 SVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNI--KILYKVRNEMRAA 377
ML QR+EFK + EW+ AKP L V RV +A+ I +VR E+ +
Sbjct: 240 ESMLLFQRHEFKGNHGEWIAKAKPYLTRTVESRVHKAVLLPDSEALRVIAIQVREEISSL 299
Query: 378 LQRLLK 383
+ LLK
Sbjct: 300 MNNLLK 305
>gi|374324241|ref|YP_005077370.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Paenibacillus terrae
HPL-003]
gi|357203250|gb|AET61147.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Paenibacillus terrae
HPL-003]
Length = 391
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 145/401 (36%), Positives = 206/401 (51%), Gaps = 26/401 (6%)
Query: 67 PAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKT 126
P + L+GL F +KDVF V+ G G+P W + H A A ++LLL+ GA G T
Sbjct: 16 PTGQGTLSGLSFMVKDVFAVRDNTNGAGNPCWLQTHGPAAEHAETLSLLLQQGARLTGTT 75
Query: 127 VLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
DE F + GEN HYGTPVNP+ P IPGGSSSGSAVAVAA L DFALGTDT G VRVP
Sbjct: 76 HTDELMFSLNGENVHYGTPVNPKAPDRIPGGSSSGSAVAVAAGLADFALGTDTGGSVRVP 135
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRAR 246
+S+CG+ G RP+ G VS GV+P + S DTVG +AR+ L RVG VLL A +R
Sbjct: 136 SSYCGVYGMRPTQGIVSENGVIPLAPSFDTVGWMARDPETLCRVGKVLLPQTASGSGFSR 195
Query: 247 RLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQST 306
LI +D ++L+ ++ ++ +E L G A
Sbjct: 196 VLI-GEDAWELADT---ESKDALASCLELLCGLAESHE------------------AVRI 233
Query: 307 SPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKI 366
+P+ L ++ ++Q YE + W++ +P G ++ R A + + +
Sbjct: 234 APQG----LPEWMAMFRTIQGYEIWQEHGAWIEREQPVFGPDIAGRFSWAGTIERADQEK 289
Query: 367 LYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGC 426
+ R E+R + LL D +LVIPT + KL E +T+ L+ I +SG
Sbjct: 290 EVERRLEVRKHMADLLGTDAVLVIPTTTGVAPKLGLNGPLIEERRVQTMRLTCIAGLSGL 349
Query: 427 CQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
Q+ IP + P+ IS I G D+ LL+ L +++
Sbjct: 350 PQLTIPAAEVLGCPVGISLIVGPGQDRRLLEWAASLVPAVK 390
>gi|83310767|ref|YP_421031.1| amidase [Magnetospirillum magneticum AMB-1]
gi|82945608|dbj|BAE50472.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related
amidase [Magnetospirillum magneticum AMB-1]
Length = 391
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 145/387 (37%), Positives = 208/387 (53%), Gaps = 29/387 (7%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAGL FA KDVFDV GYVTG G+PDW+R A+ TA + LL++GA +GKT DE
Sbjct: 23 PLAGLTFAAKDVFDVAGYVTGAGNPDWRRLAEPAKHTAWAIGTLLESGARLVGKTHTDEL 82
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
GI G+N HYGTP NP+ P H+PGGSSSGSA AVA L ALGTDT G RVPASFCG
Sbjct: 83 TRGIFGDNSHYGTPDNPRAPGHVPGGSSSGSAAAVAGGLCSMALGTDTAGSTRVPASFCG 142
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
+ G RP+ GT+ M GVL S + DTVGLLA + IL ++G LL+ + R A+ ++
Sbjct: 143 VFGLRPTLGTIPMDGVLSQSNTFDTVGLLADDPEILAKMGEALLRKKIKDTRPAQVVVLE 202
Query: 252 DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENG 311
D + + + E+++ P ++G R S P
Sbjct: 203 DALEASDPAVAAAIEAALPRIKEAVA------------------PIVRG-RKLSPVP--- 240
Query: 312 TATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVR 371
L ++Q E + EW+ ++ PR G+ V + L +Q + R
Sbjct: 241 ---LADWVEHQNAIQGREAWETFGEWINNSNPRFGFEVADNFLRGSKVSQRTLSAARGFR 297
Query: 372 NEMRAALQRLLKDDKILVIPT--VSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
+ +Q L+ + +LV+PT V+ PP +++ ++ E R + L++I M+GC Q+
Sbjct: 298 LRAKRWVQEALEGNAMLVLPTTPVTAPP--VHSPRSVMWEIRHRIVSLTTIAGMAGCPQI 355
Query: 430 AIPIGKYNEHPISISFITYHGGDKFLL 456
++P+ K + P+ +S I G D LL
Sbjct: 356 SLPLCKVDGLPVGLSLIGPRGSDALLL 382
>gi|297582895|ref|YP_003698675.1| amidase [Bacillus selenitireducens MLS10]
gi|297141352|gb|ADH98109.1| Amidase [Bacillus selenitireducens MLS10]
Length = 391
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 139/388 (35%), Positives = 206/388 (53%), Gaps = 26/388 (6%)
Query: 78 FAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITG 137
FA+KDVF ++G+ G+P W + H A+ TA + LL+ GAT G TV DE + + G
Sbjct: 29 FAVKDVFHIEGHRNTAGNPHWLQSHAPAKATAPALVHLLQAGATLKGTTVTDEMMYSLHG 88
Query: 138 ENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRP 197
EN HYGTPVNP S IPGGSSSGSAVA A L DFA+GTDT G VR+PAS+CG+ G+RP
Sbjct: 89 ENVHYGTPVNPFDKSLIPGGSSSGSAVATGAGLRDFAIGTDTGGSVRIPASYCGLFGFRP 148
Query: 198 SHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIFQL 257
SHG VS+ GV+P + S DTVG RNA++L VG VL+ + + +R + A D F L
Sbjct: 149 SHGKVSLEGVIPLADSFDTVGWFTRNAALLEDVGEVLIGDSMPDAPDFKRAVIARDAFSL 208
Query: 258 SKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTATLKA 317
L+ Q+ M+ + +S V S + R + L
Sbjct: 209 ------------------LTDTQHNALMSAVRSCSSKVKSHEEQRITNDD-------LGD 243
Query: 318 LSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNEMRAA 377
+ +Q YE + EWVK+ +P G + ER A + ++ + + ++ A
Sbjct: 244 WVDIFRVIQGYEIWLNHGEWVKAHEPDFGPGIRERFHMAEQIKEADVAEARRRQLMIQDA 303
Query: 378 LQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYN 437
+++ D +++IPT++ P + + RT+ L++I ++G QV IP+ +
Sbjct: 304 TADIMQPDTLMIIPTIAGEPPAVGLPPEEVDKIRQRTMKLTAIAGLNGLPQVTIPVKRGG 363
Query: 438 E-HPISISFITYHGGDKFLLDTVLDLYD 464
P++IS + G D+ LL V L D
Sbjct: 364 GLPPLAISILAPKGRDRDLLSFVTSLCD 391
>gi|255074227|ref|XP_002500788.1| predicted protein [Micromonas sp. RCC299]
gi|226516051|gb|ACO62046.1| predicted protein, partial [Micromonas sp. RCC299]
Length = 385
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 147/400 (36%), Positives = 196/400 (49%), Gaps = 35/400 (8%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERT-AVVVTLLLKNGATCIGKTVLDE 130
PLAGL FA+KD DV G+ TG G P W H E R A V LL GA C+GKT +DE
Sbjct: 6 PLAGLTFAVKDNLDVAGHRTGCGQPTWLDTHPEPARQHAPPVASLLAAGAACVGKTQMDE 65
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
A+ + GEN HYGTP+NP P +PGGSSSGSAVAVAA D ALGTDT G VRVPAS+C
Sbjct: 66 LAWALQGENHHYGTPINPAAPERVPGGSSSGSAVAVAAGYADVALGTDTAGSVRVPASYC 125
Query: 191 GILGYRPSHGTVSMI-GVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
G+ G+RP+HG V G +P + S D VG AR+A+ + R G VLL P A
Sbjct: 126 GLCGFRPTHGRVDATRGCVPLAPSFDVVGWFARDATTMLRCGSVLLP-----PWGAWDTA 180
Query: 250 F--------ADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGL 301
F A D F+L +T + +A+ G P G + +V
Sbjct: 181 FDLRFDGAIARDAFELCDE---ETRATLREAVARACG-PGPLGEAGGGTVEVDVGG---- 232
Query: 302 RAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQ 361
ST P L +V +Q E + WV +PR G V ER A T
Sbjct: 233 -GGSTPP------LTEWWNVFRVIQANEVWRAHGAWVSEHQPRFGPGVKERFEGAGGVTD 285
Query: 362 DNIKILYKVRNEMRAALQRLLKD-----DKILVIPTVSDPPLKLNTKKTYSAEFHDRTLV 416
K R+ + A+++ + D D+ L +PT PPL F +R L
Sbjct: 286 AEAAEASKTRDAIAASMESTMVDEATGKDRFLFLPTSPGPPLASGADAQTVESFRNRQLR 345
Query: 417 LSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
L++ ++ Q +P+ + + P+ +S + G D+ LL
Sbjct: 346 LTAAAGLARLPQATVPVPRRSGPPLGLSVVGPRGTDEALL 385
>gi|23015866|ref|ZP_00055631.1| COG0154: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and
related amidases [Magnetospirillum magnetotacticum MS-1]
Length = 391
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 145/387 (37%), Positives = 212/387 (54%), Gaps = 29/387 (7%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAGL FA KDVFDV GYVTG G+PDW+R A++TA V+ LL++GA +GKT DE
Sbjct: 23 PLAGLTFAAKDVFDVAGYVTGAGNPDWRRLAEPAKQTAWAVSALLESGARLVGKTHTDEL 82
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
GI G+N HYGTP NP+ P H+PGGSSSGSA AVA L ALGTDT G RVPASFCG
Sbjct: 83 TRGIFGDNSHYGTPDNPRAPGHVPGGSSSGSAAAVAGGLASMALGTDTAGSTRVPASFCG 142
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
+ G RP+ GT+ M GVL S + DTVGLLA +A IL +G LL+ + R A+ ++
Sbjct: 143 VYGLRPTLGTIPMDGVLSQSNTFDTVGLLADDAEILGLMGEALLRKKIKDVRPAQAVVLE 202
Query: 252 DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENG 311
D + + + ++++ + G+ + S VP + Q+
Sbjct: 203 DAMEASDPAVAAAIEAALPRIKDAVA------PITRGRKV-SPVPLADWVEHQN------ 249
Query: 312 TATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVR 371
++Q E + EW+ ++ PR G+ V + L +Q + R
Sbjct: 250 ------------AIQGREAWERFGEWINNSNPRFGFEVADNFLRGSKVSQRTLSAARGFR 297
Query: 372 NEMRAALQRLLKDDKILVIPT--VSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
+ +Q L+ + +LV+PT V+ PP +++ ++ E R + L++I M+GC Q+
Sbjct: 298 LRAKRWVQEALEGNAVLVLPTTPVTAPP--VHSPRSVMWEIRHRMVSLTTIAGMAGCPQI 355
Query: 430 AIPIGKYNEHPISISFITYHGGDKFLL 456
++P+ K + P+ +S I G D LL
Sbjct: 356 SLPLCKVDGLPVGLSLIGPRGSDALLL 382
>gi|255086029|ref|XP_002508981.1| chloroplast envelope protein translocase family [Micromonas sp.
RCC299]
gi|226524259|gb|ACO70239.1| chloroplast envelope protein translocase family [Micromonas sp.
RCC299]
Length = 582
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 154/514 (29%), Positives = 249/514 (48%), Gaps = 35/514 (6%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
A+ PL G++F+I+DVFDV+G VT GSP W H A R A V L GA CIG T +
Sbjct: 52 AKGPLRGIRFSIQDVFDVQGRVTSLGSPAWAATHAPATRDAPAVASLRAAGADCIGVTRM 111
Query: 129 DEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAA--QLVDFALGTDTIGCVRVP 186
DE ITG + G P+NP IPGGSSSG+AV+VA + VD AL D+ G VRV
Sbjct: 112 DELGCSITGCDAVDGAPINPVARDKIPGGSSSGAAVSVAGAPKEVDMALAVDSSGGVRVS 171
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRAR 246
A+ CG+ R +HGTV++ G + SL G ++R+ ++ L+ L + +R
Sbjct: 172 AAHCGLYAIRTTHGTVALDGASSTTGSLAAAGWMSRDPDVIAATATALIPLPKDQISVSR 231
Query: 247 RLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNP--EHMNVGQYIASNVPSLKGLRAQ 304
++ D I + + V + + ++N +N+G+++ PSL+ ++ +
Sbjct: 232 VMVLEDAIDLCDDI---ASCGVATACMLLKDAFKNGGISRLNLGKHLLMACPSLREMQNK 288
Query: 305 STSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNI 364
+ L L + + ++ E + W + KP G E +L A D++
Sbjct: 289 DCA-----TGLDVLRNCLRLIEGEEVWSQIGGWYSAEKPETGAKAKEYLLGASKIATDSL 343
Query: 365 KILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMS 424
+++ + R E+RAA+ LL + ++PT P +N +A + + L L+ + S++
Sbjct: 344 RVIKQAREEVRAAVDLLLDGVTVFLLPTTPCAPPPMNAGAEATATWERKVLQLTCLSSLT 403
Query: 425 GCCQVAIPIG-KYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVN--IASNLVPLPD 481
G Q+ IP+ + E P +S + D ++ L+E + + L L D
Sbjct: 404 GTPQLTIPLTYEQAEGPYGLSVVAGRKQDYMCIEFARMFGAQLREAFPDVVQAELTRLKD 463
Query: 482 -TNGSIDAS-------ELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGT------------ 521
NG D S E LK +GN FK +N+A+ Y+EA+ G
Sbjct: 464 EENGGKDDSDAVPSMCEELKAQGNKEFKAGNFNEAIVKYTEALTALGPPPNMRPDPHRAW 523
Query: 522 SATYYSNRAAAYLELGCFQQAEEDCSKTISLDKK 555
+ SNRA L+LG + AE+DC+ + L++K
Sbjct: 524 KSVVLSNRAMTNLKLGVYNDAEDDCTAALKLNEK 557
>gi|332528635|ref|ZP_08404617.1| amidase [Hylemonella gracilis ATCC 19624]
gi|332041951|gb|EGI78295.1| amidase [Hylemonella gracilis ATCC 19624]
Length = 412
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 150/406 (36%), Positives = 209/406 (51%), Gaps = 22/406 (5%)
Query: 64 PPPPAARQP-----LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKN 118
P P A R+P LAG++ A+KD+ DV G +TG G+PDW H EA A V L
Sbjct: 19 PGPRAEREPTGPGRLAGVRLAVKDLIDVGGTITGGGNPDWASSHGEAAADAPCVAALRAA 78
Query: 119 GATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTD 178
GA +GKTV DE AF + GEN +GTPV+P P +PGGSSSGSAVAVA D ALGTD
Sbjct: 79 GARVVGKTVTDELAFSLEGENAFFGTPVHPLDPGRLPGGSSSGSAVAVAWGEADLALGTD 138
Query: 179 TIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLL-QL 237
T G VRVPASFCG+ RP+HG +++ GVLP + SLDTVG AR+A++L G VLL
Sbjct: 139 TGGSVRVPASFCGLHALRPTHGRIALSGVLPFAPSLDTVGWFARDAALLRDAGQVLLGGS 198
Query: 238 NAVEPRRAR-RLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVP 296
+A P RA RL A D L+ P+++ + L E + G+
Sbjct: 199 SAPTPVRAPLRLCIAQDTLALAS-PEVREALLDWARRAGL----REERLAFGE------- 246
Query: 297 SLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEA 356
G + + E GTA + + +LQ E +T W+++ +PR G + R A
Sbjct: 247 ---GEGDAAVAQEQGTAPWRDWLTAYATLQGLEIRTHLGPWIRARRPRFGPAIAPRFAGA 303
Query: 357 INTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLV 416
+ + R + AL+ L D+ ++P L F+D L
Sbjct: 304 LALDESIGARWRAWRTDAARALRERLGQDEAWLVPAAPTVALHRGADAATRNAFYDHALA 363
Query: 417 LSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDL 462
L ++ ++G Q+ +P+ PI +SFI+ G D+ LLD + L
Sbjct: 364 LGALAGLAGLPQLVLPLRHTQGLPIGLSFISAPGHDERLLDLAVAL 409
>gi|298293565|ref|YP_003695504.1| amidase [Starkeya novella DSM 506]
gi|296930076|gb|ADH90885.1| Amidase [Starkeya novella DSM 506]
Length = 401
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 143/395 (36%), Positives = 199/395 (50%), Gaps = 31/395 (7%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL+GL FAIKDVFDV G TGFG P W H A +TA VT LL GA G+T+ DE
Sbjct: 32 PLSGLSFAIKDVFDVAGSCTGFGHPTWLATHTAATQTAAAVTRLLSTGAALRGRTISDEL 91
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
+ ++GEN HYG PVNP +PGGSSSGSAVAVAA VDFA+GTD G VRVPAS+CG
Sbjct: 92 CYSLSGENFHYGMPVNPAARERLPGGSSSGSAVAVAAGQVDFAIGTDCGGSVRVPASYCG 151
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
+ G RP+HG VS+ GV + DTVG AR+A++L RVG VL L + P+ R++ A
Sbjct: 152 LFGLRPTHGRVSLEGVSRFAPRFDTVGWFARDAALLKRVGEVL--LGSTAPQGFDRVLVA 209
Query: 252 DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENG 311
D F+ P+ + + + KA+E L G +P H+ SP
Sbjct: 210 TDAFEQCD-PQARAL--LEKAVERL-GSPSPLHL---------------------SPIG- 243
Query: 312 TATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVR 371
L +LQ +E W+ +P G V +R+ A + + + +
Sbjct: 244 ---LDRWLDTFRTLQAWEVWQSLGGWINQTRPSFGDGVGQRLAAAEQVGRADAEAARQRA 300
Query: 372 NEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAI 431
+ + L + D +L+ T PPL+ + R + L + G Q+ I
Sbjct: 301 DAIALELDEAIGDGLVLLPTTPGAPPLRATASTEIENAYRYRAMQLLCPAGLGGLPQLTI 360
Query: 432 PIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSL 466
P+G + P+ +S + G D L+D + L
Sbjct: 361 PVGTVDGAPVGLSIMARRGKDMDLMDLAAKAFADL 395
>gi|452963960|gb|EME69012.1| amidase [Magnetospirillum sp. SO-1]
Length = 391
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 143/387 (36%), Positives = 204/387 (52%), Gaps = 29/387 (7%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAGL FA KDVFDV GYVTG G+PDW+R A TA + LL++GA +GKT DE
Sbjct: 23 PLAGLTFAAKDVFDVAGYVTGAGNPDWRRLAEPARHTAWAIGTLLESGARLVGKTHTDEL 82
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
GI G+N HYGTP NP+ P H+PGGSSSGSA AVA L ALGTDT G RVPASFCG
Sbjct: 83 TRGIFGDNSHYGTPDNPRAPGHVPGGSSSGSAAAVAGGLASMALGTDTAGSTRVPASFCG 142
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
+ G RP+ G++ M GVL S + DTVGLLA + IL R+G LL+ + R A+ ++
Sbjct: 143 VFGLRPTLGSIPMDGVLSQSNTFDTVGLLADDPDILARMGEALLRKKIKDVRPAQVVVLE 202
Query: 252 DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENG 311
D + + + ++++ P ++G R SP
Sbjct: 203 DALAASDPAVAAAIEAALPRIKDAVA------------------PIVRGRR---VSP--- 238
Query: 312 TATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVR 371
L ++Q E + EW+ ++ PR G+ V + L + + R
Sbjct: 239 -VPLADWVEHQNAIQGREAWERFGEWINNSNPRFGFEVADNFLRGSKVSNRTLSAARGFR 297
Query: 372 NEMRAALQRLLKDDKILVIPT--VSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
R +Q L+ + +LV+PT V+ PP +++ ++ E R + L++I M+GC Q+
Sbjct: 298 LRARRWVQEALEGNAVLVLPTTPVTAPP--VHSPRSVMWEIRHRIVSLTTIAGMAGCPQI 355
Query: 430 AIPIGKYNEHPISISFITYHGGDKFLL 456
++P+ P+ +S I G D LL
Sbjct: 356 SLPLCTAGGLPVGLSLIGPRGSDALLL 382
>gi|307106484|gb|EFN54730.1| hypothetical protein CHLNCDRAFT_35982 [Chlorella variabilis]
Length = 449
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 149/398 (37%), Positives = 197/398 (49%), Gaps = 22/398 (5%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL GL +KD FDV G+ T GSP W H A+R A V LL GAT IG V+DE
Sbjct: 72 PLTGLTAVVKDCFDVAGHRTSNGSPAWLETHPPAQRNAAAVQALLDAGATIIGTNVMDEM 131
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+ + GEN HYGTP NP P IPGGSSSG+A AVAA D LG DT G VRVPA CG
Sbjct: 132 AYSLAGENAHYGTPANPAAPGRIPGGSSSGTAAAVAAGDADLGLGGDTGGSVRVPACHCG 191
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
ILG RP+HG VS+ G +P + S DT G AR+A +L VG VLL + P + RRL+ A
Sbjct: 192 ILGIRPTHGRVSLQGAVPLAPSFDTGGWFARDAGVLRAVGGVLLDGGSRRPAQLRRLLVA 251
Query: 252 DDIFQLSKVPKLKTIH-VISKAIESLSG-YQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
D F L++ K ++ +S I+ ++ P+ + VG S GL
Sbjct: 252 ADAFGLAEEATTKALYDALSPKIDQVAALLSKPQEVEVGS-------STGGLS------- 297
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
+A + Q +E + WV +P G + ER A ++ + +
Sbjct: 298 ------QAWFNAFRVHQAHEIWQQHGAWVTEHRPNFGPGIRERFQMAEGVSRKQYEEAAQ 351
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
R R L LL D +L++PT P LNT F + L+ I +SG QV
Sbjct: 352 QRGAARQRLAELLGGDGVLMLPTAPAPAPLLNTPSDQLDAFRTSLISLTCIAGLSGFPQV 411
Query: 430 AIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
+PI P+ + I G D+ LL+ L L+
Sbjct: 412 NVPIADVEGLPVGLGLIGPPGSDEDLLELTEQLLAVLR 449
>gi|403068359|ref|ZP_10909691.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Oceanobacillus sp.
Ndiop]
Length = 391
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 137/400 (34%), Positives = 213/400 (53%), Gaps = 29/400 (7%)
Query: 67 PAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKT 126
P+ L GL F++KDV +KG+ G G+PDW H EA R A V+ LL++GA G T
Sbjct: 17 PSGHSLLDGLTFSVKDVIAIKGHTNGAGNPDWLASHDEAGRHAPVIERLLQHGARLHGVT 76
Query: 127 VLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
DE + + GEN HYGTPVNP+ P IPGGSSSGSAVAV+ VDFALGTDT G VR+P
Sbjct: 77 HTDEIMYSLNGENYHYGTPVNPKAPDRIPGGSSSGSAVAVSGGSVDFALGTDTGGSVRIP 136
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRAR 246
+++CGI G+RP+HG +SM GV+P +QS DT+G +AR+ +I+ +VG+ LL
Sbjct: 137 SAYCGIFGFRPTHGAMSMEGVIPLAQSFDTIGWMARSPAIMRKVGNALLDEADQNDAGKT 196
Query: 247 RLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQST 306
IF + +A E L + +++ P + L ++S
Sbjct: 197 EFIF------------------LKQAWEFLD-------EDTSNVLSAFTPIFEKLGSKSI 231
Query: 307 SPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKI 366
+ +A+L ++ +Q E + +W++ +P G ++ R A +D +
Sbjct: 232 A----SASLSDWANAFRYIQGIEIWQEHGKWIRQTRPAFGPDIAARFEWASTLNKDGAEK 287
Query: 367 LYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGC 426
+++R E+ L L ++ + VIPT KLN E ++T+ L+ I ++G
Sbjct: 288 EFELRKELWKTLAEELGNNGVFVIPTTPGTAPKLNLASKELEERRNKTMQLTCIAGLAGL 347
Query: 427 CQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSL 466
QV IP + + P+ +S I D+ LL V +++++
Sbjct: 348 PQVTIPAAEIDGMPVGLSIIANRNQDRRLLMLVEKIFETI 387
>gi|414872364|tpg|DAA50921.1| TPA: toc64 isoform 1 [Zea mays]
gi|414872365|tpg|DAA50922.1| TPA: toc64 isoform 2 [Zea mays]
Length = 281
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/234 (50%), Positives = 155/234 (66%), Gaps = 3/234 (1%)
Query: 322 MLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNEMRAALQRL 381
M+SL + EFK + EW+ S KP + + + E ++ D + VR E R+AL L
Sbjct: 1 MISLHKQEFKDKHMEWINSVKPAVDARIVSDLSEDGDSDIDGCQ---NVRKEARSALSGL 57
Query: 382 LKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPI 441
LKDD ILVIPT P KLN K+ S ++ +TL L S+ SMSGCCQV+IP+G +++ PI
Sbjct: 58 LKDDGILVIPTALGCPPKLNAKELSSESYNSQTLRLLSLASMSGCCQVSIPLGTHDKCPI 117
Query: 442 SISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNLVPLPDTNGSIDASELLKEKGNAAFK 501
S+S I HGGD+FLLDT +Y ++QEQV I + + +A+E KEKGNAAFK
Sbjct: 118 SVSLIARHGGDRFLLDTTQTMYTTIQEQVEILAKSSVSSKQAMNEEAAEAAKEKGNAAFK 177
Query: 502 GKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQQAEEDCSKTISLDKK 555
KQW KAVN+Y+EAIKLNG ATYYSNRAAA+LEL ++QAE DC+ I LD K
Sbjct: 178 EKQWQKAVNFYTEAIKLNGKVATYYSNRAAAFLELTSYRQAEADCTSAIELDSK 231
>gi|187919949|ref|YP_001888980.1| amidase [Burkholderia phytofirmans PsJN]
gi|187718387|gb|ACD19610.1| Amidase [Burkholderia phytofirmans PsJN]
Length = 399
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 146/401 (36%), Positives = 204/401 (50%), Gaps = 32/401 (7%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
A PL GL+FA+KD+ DV G TG G+PDW H A A V LL GAT GKT+
Sbjct: 16 ASGPLDGLRFAVKDLIDVAGEPTGGGNPDWLSTHAAARVHAPCVDALLAAGATLDGKTIT 75
Query: 129 DEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPAS 188
DE A+ + GEN HYGTP+NP+ P +PGGSSSGSA AVA VDFALGTDT G VRVPA+
Sbjct: 76 DELAYSLEGENHHYGTPLNPRWPQALPGGSSSGSASAVANGDVDFALGTDTGGSVRVPAA 135
Query: 189 FCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQL----NAVEPRR 244
FCG+ G RPSHG +++ GVLP + DTVG AR+ ++L VG VLL + + R
Sbjct: 136 FCGLFGMRPSHGAIALDGVLPFAPCFDTVGWFARSIAVLQAVGDVLLPVMSRGDGASLNR 195
Query: 245 ARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQ 304
RL + F + + ++ ESL G NV S G R
Sbjct: 196 PVRLTRVAEAFAARERNEPDDAARLTALAESL-----------GAQSLRNVFSGGGAR-- 242
Query: 305 STSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNI 364
+ ++Q E EW++S +PR G ++ R +
Sbjct: 243 -------------WLACYQAVQDLEIDASLGEWIRSTQPRFGPSIAPRFARLETLDRQRA 289
Query: 365 KILYKVRNEMRAALQRLLKDDK--ILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGS 422
V E+R+AL L K+++ +LV+PT L+ + F++ +L ++S+ +
Sbjct: 290 TQWRTVLQELRSALDSLFKEEENTVLVMPTTPVSLLRKDASGEAIGRFYEDSLTMNSLAA 349
Query: 423 MSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLY 463
G Q+ +P + P+++S I G D+ LL DLY
Sbjct: 350 FGGLPQITLPFNDALDRPLALSLIGARGSDRALLSLARDLY 390
>gi|170694812|ref|ZP_02885962.1| Amidase [Burkholderia graminis C4D1M]
gi|170140172|gb|EDT08350.1| Amidase [Burkholderia graminis C4D1M]
Length = 405
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 138/408 (33%), Positives = 204/408 (50%), Gaps = 35/408 (8%)
Query: 67 PAARQPL------AGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGA 120
PAA PL G + A+KDVFDV G TG G+ W+ + A RTA+ V LL+ GA
Sbjct: 24 PAAALPLRTGGKLVGERLAVKDVFDVAGLRTGSGNLAWRDEQPVATRTALAVRALLEEGA 83
Query: 121 TCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTI 180
+GKTV DE + + G N HYGTPVNP P+ IPGGSSSGS VAVAA D ALGTD
Sbjct: 84 QWLGKTVTDELTYSLAGVNAHYGTPVNPSDPARIPGGSSSGSVVAVAAGHADIALGTDCG 143
Query: 181 GCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAV 240
G VR+PAS+CG+ G RP+HG ++ G L + S DTVG AR+A +L VL
Sbjct: 144 GSVRLPASYCGVWGMRPTHGRIAADGCLTLAHSFDTVGWFARDARLLADTFEVL------ 197
Query: 241 EPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKG 300
AR L+ AD VP+ +L +P +V +++P+L G
Sbjct: 198 ----ARSLVPADQAAFALHVPR------------NLLACVDP---DVAARFEASLPAL-G 237
Query: 301 LRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTT 360
RA+ +PE A+L + LQ E Y +W + G +V R ++ T
Sbjct: 238 ERARFVAPE---ASLADWAQAFRVLQAAEIAQRYGQWAREHAASFGADVGARFAMSLGIT 294
Query: 361 QDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSI 420
++ I ++R E A+ L + ++PTV + + R+ +
Sbjct: 295 REQIADAQRIRAEAIRAMAHALPERTYWLVPTVPGVAPRADASAQTLDHVRARSQQMLCA 354
Query: 421 GSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQE 468
++G QV++P +++ P+ +S I G D+ +L ++D +++
Sbjct: 355 AGLAGLPQVSMPWTRFDGVPVGLSVIGARGADEGVLAAARAVHDVMRD 402
>gi|336113566|ref|YP_004568333.1| amidase [Bacillus coagulans 2-6]
gi|335366996|gb|AEH52947.1| Amidase [Bacillus coagulans 2-6]
Length = 394
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 139/396 (35%), Positives = 204/396 (51%), Gaps = 35/396 (8%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G FA+KDVF VKG+ G+PDW H A A V+ LL GA G T DE
Sbjct: 23 LDGYTFAVKDVFAVKGHRNAAGNPDWYDFHPAAGENAPVIEWLLNEGARLTGMTHTDELM 82
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+ + GEN HYGTPVNP + IPGGSSSGSAVAVAA DFA+GTDT G VR+P+++CGI
Sbjct: 83 YSLNGENFHYGTPVNPVLKDRIPGGSSSGSAVAVAAGCTDFAIGTDTGGSVRIPSAYCGI 142
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G+RPSHG + M GV+P + S DT+G ++++ IL++VG VL + + + + FA+
Sbjct: 143 FGFRPSHGVIKMKGVIPLAPSFDTIGWMSKDPGILYKVGQVLFKPDQDIRPQFESIFFAE 202
Query: 253 DIFQLS-----KVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
D ++L+ K+ + K H++ ++ + V IA
Sbjct: 203 DAWELAGEETRKLLESKWHHLLKNRVQHV----------VRTAIADQ------------- 239
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQD-NIKI 366
TLK+ S LQ E + W++ A+P+ G ++ ER A T+D + +
Sbjct: 240 ------TLKSWSHAFRLLQGREVWKTHGAWIEHARPQFGPDIAERFKWASTITEDSHWEK 293
Query: 367 LYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGC 426
++R +R L+ LL +LV+PT P + + T+ LS I ++G
Sbjct: 294 ANQLRLNIRDKLRGLLGSSGLLVLPTTPGPAPATGRSMEEIEKTREHTMQLSCIAGLAGL 353
Query: 427 CQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDL 462
Q+ IP PI +S + + D LL V +L
Sbjct: 354 PQLTIPFLTATGEPIGLSVVAGYRQDVKLLAWVEEL 389
>gi|215272287|dbj|BAG84638.1| indole-3-acetamide hydrolase [Nicotiana tabacum]
Length = 167
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 104/167 (62%), Positives = 125/167 (74%), Gaps = 5/167 (2%)
Query: 48 DFGAFLERFELIPFPQPPPPAARQ-PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAE 106
++GA +E+F L QP ++ Q PL GL FA+KD+FDV+G++TGFG+PDW + H A
Sbjct: 5 EYGALIEKFTL----QPICSSSEQLPLNGLTFAVKDIFDVEGHITGFGNPDWAKTHSAAT 60
Query: 107 RTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAV 166
TA V LLK GATCI KTV+DE A+ I GEN HYGTPVNP P +PGGSSSGSAVAV
Sbjct: 61 STATTVLTLLKAGATCIAKTVMDEMAYSINGENVHYGTPVNPVSPDRVPGGSSSGSAVAV 120
Query: 167 AAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQS 213
A+LVDF+LGTDT G VRVPAS+CGI G RPSHG VS +GV P +QS
Sbjct: 121 GAKLVDFSLGTDTGGSVRVPASYCGIYGIRPSHGVVSTVGVTPMAQS 167
>gi|154247978|ref|YP_001418936.1| amidase [Xanthobacter autotrophicus Py2]
gi|154162063|gb|ABS69279.1| Amidase [Xanthobacter autotrophicus Py2]
Length = 393
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 146/389 (37%), Positives = 194/389 (49%), Gaps = 29/389 (7%)
Query: 66 PPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGK 125
P A PLAGL FA+KDV DV G TG G PDW H A R+AV V LL GA+ GK
Sbjct: 19 PGAPAGPLAGLTFAVKDVMDVAGTSTGNGHPDWLTTHPPAARSAVAVDRLLDAGASLAGK 78
Query: 126 TVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
T+ DE + +TGEN HYGTP+NP P +PGGSSSGSA A A +VDFALGTD G VRV
Sbjct: 79 TIADELCYSLTGENVHYGTPLNPAAPDRVPGGSSSGSASATAGSVVDFALGTDCGGSVRV 138
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRA 245
P+S+CG+ G RP+HG + + GV P + S D VG AR+A +L RVG VLL A P
Sbjct: 139 PSSYCGLFGMRPTHGRIPLEGVAPFAPSFDCVGWFARDAGLLERVGRVLLADAAPAPLLT 198
Query: 246 RRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQS 305
R L + LS + A E+++ G IA
Sbjct: 199 RLLAPREAFAMLSPEAAAALAPALRLAQETIA---------PGAEIA------------- 236
Query: 306 TSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIK 365
+P+ L A S+ +LQ E W+++ +P G V ER A + ++
Sbjct: 237 LAPDG----LDAWSATFRTLQAAEIWASVGPWIEAVRPAFGPGVKERFDAARTISPSAVE 292
Query: 366 ILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLS--SIGSM 423
+ R +RA L LL+ ++PTV P L T E R L ++ I +
Sbjct: 293 VACAHRAAIRARLDDLLQPGTAFLMPTVPRP-APLRGMATAQVEVVTRHLAMNLLCIAGL 351
Query: 424 SGCCQVAIPIGKYNEHPISISFITYHGGD 452
G QV++P+ + P +S + G D
Sbjct: 352 GGLPQVSLPLARLEGVPFGLSLVGPAGSD 380
>gi|147782193|emb|CAN72047.1| hypothetical protein VITISV_002654 [Vitis vinifera]
Length = 200
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/199 (60%), Positives = 142/199 (71%), Gaps = 19/199 (9%)
Query: 1 MSKSFNIIK--TNTSNPKVWVVIGVSVVGFVVLAETLRRRRNPKLNGRVDFGAFLERFEL 58
MSK+ + +K + SNPK W+VI V G V+L ET RR+R L R GAF+ERFEL
Sbjct: 1 MSKALHQLKKHIDVSNPKAWIVIAAGVAGIVILVETRRRKRRAALLTREGLGAFVERFEL 60
Query: 59 IPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKN 118
+PFPQPPPPA+R L+G KFA+ D+FDVKGYVTGFGS WKR H EA +TAV VT LLKN
Sbjct: 61 LPFPQPPPPASRLLLSGFKFAVTDIFDVKGYVTGFGSTSWKRTHEEATKTAVAVTALLKN 120
Query: 119 GATCIGKTVLDEFAFG-----------------ITGENKHYGTPVNPQMPSHIPGGSSSG 161
GATC+GKTVLDE +FG ITGEN +G+P NP +PSHIPGGSSSG
Sbjct: 121 GATCVGKTVLDELSFGFVVYFSFDFTCVFEIKRITGENMDFGSPANPVLPSHIPGGSSSG 180
Query: 162 SAVAVAAQLVDFALGTDTI 180
SAVAVA+QLVDFA+G D I
Sbjct: 181 SAVAVASQLVDFAIGIDKI 199
>gi|339627640|ref|YP_004719283.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfobacillus
acidophilus TPY]
gi|379007997|ref|YP_005257448.1| amidase [Sulfobacillus acidophilus DSM 10332]
gi|339285429|gb|AEJ39540.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfobacillus
acidophilus TPY]
gi|361054259|gb|AEW05776.1| Amidase [Sulfobacillus acidophilus DSM 10332]
Length = 399
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 146/395 (36%), Positives = 205/395 (51%), Gaps = 27/395 (6%)
Query: 66 PPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGK 125
PP PL+G +FA KDVF VKGY T G+PDW R H TA + LLK GA GK
Sbjct: 16 PPIQDGPLSGTRFAAKDVFAVKGYPTSGGNPDWFRTHPPETTTAPAILALLKAGAALDGK 75
Query: 126 TVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
T DE +G+ GEN HYGTPVNP+ P IPGGSSSGSAVAV+A +VDFA+GTDT G VR+
Sbjct: 76 THTDELMYGLNGENVHYGTPVNPKAPDRIPGGSSSGSAVAVSAGMVDFAIGTDTGGSVRI 135
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRA 245
PAS+ GI G RP+ G ++ GV+P SQ+ DTVG +R+ +L VG VLL ++ P +
Sbjct: 136 PASYTGIFGMRPTVGRTTLTGVIPLSQTFDTVGWFSRDPGLLALVGSVLLSGHS-RPAQF 194
Query: 246 RRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQS 305
RR+I A D + L + P + ++ V + + +
Sbjct: 195 RRVIIASDAWALMEPPYRPMLQ---------------------SWVDRIVQRFEQVEEEP 233
Query: 306 TSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIK 365
+PE L + +Q Y+ + EW+ KPR G ER T +
Sbjct: 234 IAPEG----LDQWAQGFRVIQGYDIWQNFGEWITHTKPRFGPGFRERFAWTATITVEERD 289
Query: 366 ILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSG 425
+ R ++ L L D I+++PT P + NT F DR L L++I + G
Sbjct: 290 MWNAKRQIWQSNLAERLGTDTIILLPTAPGPAPQRNTPLPILNAFRDRVLQLTAIAGLGG 349
Query: 426 CCQVAIP-IGKYNEHPISISFITYHGGDKFLLDTV 459
Q+++P + +P+ +S I G D+ L++ V
Sbjct: 350 LPQISLPGVVSPEGYPLGLSVIGGSGTDEALMEWV 384
>gi|433461543|ref|ZP_20419152.1| peptidase M22, glycoprotease [Halobacillus sp. BAB-2008]
gi|432190043|gb|ELK47094.1| peptidase M22, glycoprotease [Halobacillus sp. BAB-2008]
Length = 410
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 135/396 (34%), Positives = 202/396 (51%), Gaps = 32/396 (8%)
Query: 67 PAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKT 126
P L GL F +KDV V G+ G+PDW H A+ A V+ LL+ GA G T
Sbjct: 14 PTGSGILDGLTFGVKDVISVAGHTNAAGNPDWLNTHAPAQYNAPVIDRLLEEGALLHGMT 73
Query: 127 VLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
DE + + GEN HYGTP+NP+ P+ IPGGSSSGSA A + V FALGTDT G VR+P
Sbjct: 74 HTDELMYSLNGENVHYGTPINPKSPACIPGGSSSGSAAAASGGEVHFALGTDTGGSVRIP 133
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRAR 246
+S+CGI G+RP+HG + + GV+P + S DT+G +A + IL RVG + + PR
Sbjct: 134 SSYCGIYGFRPTHGAIDVQGVIPLAPSFDTIGWMADDPVILSRVGDIFFRRGKGSPR-LE 192
Query: 247 RLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQST 306
++ A D+++L P L Y P L+ ++A
Sbjct: 193 KIKIASDLWELLD-PDLHKC------------YAAP---------------LRQVKAMFK 224
Query: 307 SPENGTATLKALSSVMLSLQRYEFKTIYEE---WVKSAKPRLGYNVFERVLEAINTTQDN 363
E + L + + + + I++E W+ +PR Y+++ R+L A + + +
Sbjct: 225 EEETRLLSEDGLGKWADTFRVLQAQEIWQEHGGWITDVRPRFAYDIYRRLLWARSISGQD 284
Query: 364 IKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSM 423
+ RN+++A + DD +L++PT P K T + + +T+ LS I +
Sbjct: 285 MTERKAYRNKIKAWTNAWIGDDGVLLLPTTPAGPPKRGTPASRLEDIRTKTMKLSCIAGL 344
Query: 424 SGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTV 459
+G QV IP+ E P+SIS I G D LL+T
Sbjct: 345 AGLPQVTIPLPSTVEGPVSISLIAAKGQDLKLLETA 380
>gi|86749206|ref|YP_485702.1| amidase [Rhodopseudomonas palustris HaA2]
gi|86572234|gb|ABD06791.1| Amidase [Rhodopseudomonas palustris HaA2]
Length = 399
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 138/376 (36%), Positives = 197/376 (52%), Gaps = 30/376 (7%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAGL FA+KD FDV G TG GSP+W H +++ VV L G T +GKT DE A
Sbjct: 28 LAGLTFAVKDFFDVAGLPTGAGSPEWLATHPVPTQSSPVVDRLFAAGGTMVGKTHTDEMA 87
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+ + GEN HYGTP+NP P IPGGSSSGSA A A LVDFA+G+DT G VR+PAS+CG+
Sbjct: 88 WSLNGENAHYGTPINPAAPGRIPGGSSSGSAAATAGGLVDFAIGSDTGGSVRLPASYCGV 147
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G R +HG + + G +P + S DTVG +R+A+++ RVG VLL PRR +R++ A
Sbjct: 148 YGIRTTHGRIPLDGAVPLAPSYDTVGWFSRSAALMARVGEVLLD-GVRAPRRPKRVLIAR 206
Query: 253 DIFQLSKVPKLKTIHVISKAIESLSGY-QNPEHMNVGQYIASNVPSLKGLRAQSTSPENG 311
D+F + + + V+ + L+ PE + V A P
Sbjct: 207 DLFAALEP---RVVEVLQPGLAQLAAMLGEPEPVEV---------------AGDQRP--- 245
Query: 312 TATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVR 371
A + LQ E + WV + KP G V ER A + +R
Sbjct: 246 -----AWRNAFRVLQSAEAWAAHGAWVNAVKPAFGPGVKERFAAAAVLDPAEVVAAKALR 300
Query: 372 NEMRAALQRLLKDDKILVIPTVSD-PPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVA 430
+ + A ++ LL+DD +L+ PT PL+ +T + F R+L L +G Q++
Sbjct: 301 DTITATMRTLLQDDAVLIAPTAPGIAPLRNSTGEALE-TFRARSLELLCPAGHAGLPQLS 359
Query: 431 IPIGKYNEHPISISFI 446
+P+ ++ PI +S I
Sbjct: 360 LPLATLDDCPIGLSLI 375
>gi|390567075|ref|ZP_10247425.1| amidase [Burkholderia terrae BS001]
gi|389941018|gb|EIN02797.1| amidase [Burkholderia terrae BS001]
Length = 400
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 137/420 (32%), Positives = 205/420 (48%), Gaps = 33/420 (7%)
Query: 50 GAFL-ERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERT 108
GAF+ + F+ +P PP + LAGL+ A+KDVFD+ G TG G+ W+ A RT
Sbjct: 12 GAFVADGFDALPAAARPPRTGDK-LAGLRLAVKDVFDIAGLRTGSGNLAWRDQQPVAART 70
Query: 109 AVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAA 168
A+ V LL+ GA IGKTV DE + + G N HYGTPVNP P+ IPGGSSSGS VAVAA
Sbjct: 71 ALAVRGLLEEGAQWIGKTVTDELTYSLAGVNAHYGTPVNPADPARIPGGSSSGSVVAVAA 130
Query: 169 QLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILH 228
D ALGTD G VR+PAS+CG+ G RP+HG ++ G L + S DTVG AR+ L
Sbjct: 131 GHADIALGTDCGGSVRLPASYCGVWGMRPTHGRIATDGCLTLAHSFDTVGWFARDGRTLA 190
Query: 229 RVGHVLLQLNAVEPRRARRLIFA-DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNV 287
+ VL AR ++ A D+ F L VP+ ++++ ++ +
Sbjct: 191 DIFEVL----------ARSVVMAGDEPFAL-HVPR----NLLACVDTQVAARFEASLQVL 235
Query: 288 GQYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGY 347
G + P A+L + +LQ E Y W ++ G
Sbjct: 236 GDVVTFVAP---------------VASLADWAQAFRALQAAEIAQRYGPWARAHAASFGL 280
Query: 348 NVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYS 407
+V R ++ T D I +VR E A+ L ++PTV + +
Sbjct: 281 DVGARFAMSLTITPDQIADAQRVRIEAIRAMADALPQGSYWLVPTVPGVAPRADASAQTV 340
Query: 408 AEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
R+ + + ++G QV +P ++ P+ +S I G D+ +L T ++++++
Sbjct: 341 DNTRARSQQMLCVAGLAGLPQVNMPWTSFDGAPVGLSLIGARGADEGVLRTARAVHEAMR 400
>gi|402774032|ref|YP_006593569.1| amidase [Methylocystis sp. SC2]
gi|401776052|emb|CCJ08918.1| Amidase [Methylocystis sp. SC2]
Length = 391
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 136/390 (34%), Positives = 193/390 (49%), Gaps = 40/390 (10%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L+G F +K+ DV G V+ G P W H AER A VV LL GA +G+T +DE A
Sbjct: 22 LSGASFVVKENIDVAGNVSTNGHPKWAATHAPAERDAPVVDRLLDAGARLVGRTQMDEMA 81
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+ + G N HYGTP+NP + PGGSSSGSAVAVAA LV+FA+GTDT G R PA+FCG+
Sbjct: 82 YSLLGANPHYGTPINPAAQNRHPGGSSSGSAVAVAAGLVNFAIGTDTAGSCRAPAAFCGV 141
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G+R SHG V+M G++P + S D +G AR+ ++ VG LL NA
Sbjct: 142 FGFRASHGAVAMDGIIPLAPSFDAIGWFARDIGVMASVGEALLPANA------------- 188
Query: 253 DIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGT 312
+ +LK +++ A + M+ A V +LK TS
Sbjct: 189 ------ENAELKEAVLLTDAFSGVG-------MDFASAAAGPVDALK------TSGPWRE 229
Query: 313 ATL-----KALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
ATL K ++Q +E + W+ + P G V +R A T D K
Sbjct: 230 ATLGDDFFKTALGHFRNMQAFEAWASHGAWISANSPTFGKGVEQRFAYAAKITPDQKKAA 289
Query: 368 YKVRNEMRAALQRLLKDDKILVIPTVS-DPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGC 426
R++ R + LL LV PT PL +++T A+ + + + L I S G
Sbjct: 290 EAFRDDARKKIDALLGSQGFLVSPTAPFRAPLLTESEETLDAKRY-QMMRLFLIASFFGL 348
Query: 427 CQVAIPIGKYNEHPISISFITYHGGDKFLL 456
Q++IP+ + P+++SFI G D L+
Sbjct: 349 PQISIPL-PTTDAPVALSFIGRRGSDHALI 377
>gi|407782720|ref|ZP_11129930.1| amidase [Oceanibaculum indicum P24]
gi|407205378|gb|EKE75351.1| amidase [Oceanibaculum indicum P24]
Length = 391
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 148/386 (38%), Positives = 202/386 (52%), Gaps = 28/386 (7%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL+GL FA KD+FDV G+ TG G+ DW +++ A V LL GAT IGKT+ DE
Sbjct: 23 PLSGLSFAAKDLFDVAGHPTGGGNHDWAKNYRVPTAHAWTVQALLDAGATLIGKTITDEV 82
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
+ GI GE+ + GTP+N P +PGGSSSGSA AVAA L D ALGTDT G VRVP+SFCG
Sbjct: 83 SLGIFGESAYDGTPLNSAAPDRVPGGSSSGSAAAVAAGLCDTALGTDTGGSVRVPSSFCG 142
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
+ G RP+HG VS+ G++P + S DT G AR+A+ RV VLLQ A+ +L+ A
Sbjct: 143 LYGIRPTHGRVSVAGLMPQAPSSDTAGWFARDAATFARVSAVLLQ-EAIPEALPTKLLIA 201
Query: 252 DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENG 311
D F + + + + + SL G M A S+ G RAQ
Sbjct: 202 TDAFGFADEALAAALRPMVERLSSLLGASEEVLM------APPGLSVWG-RAQRV----- 249
Query: 312 TATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVR 371
LQ YE ++ W++SA PRL + V ++ TQ+ +R
Sbjct: 250 -------------LQPYEAWQTFQPWLESANPRLAFTVARGLIAGSQVTQEERNWANLMR 296
Query: 372 NEMRAALQRLLKDDKILVIPTVSDP-PLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVA 430
E+R L+ LL IL +PT P PL+ + A+ DR L L + G ++G QV
Sbjct: 297 QEVRGRLRYLLPAGTILCLPTTPFPAPLRGRSVPDQQAD-RDRILCLCAHGGLAGMPQVN 355
Query: 431 IPIGKYNEHPISISFITYHGGDKFLL 456
+P + PI +S + G D L+
Sbjct: 356 LPGSMVDGLPIGLSVLGGPGTDATLI 381
>gi|420248045|ref|ZP_14751419.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. BT03]
gi|398069433|gb|EJL60788.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. BT03]
Length = 400
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 136/419 (32%), Positives = 201/419 (47%), Gaps = 31/419 (7%)
Query: 50 GAFL-ERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERT 108
GAF+ + F+ +P PP + LAGL+ A+KDVFD+ G TG G+ W+ A RT
Sbjct: 12 GAFVADGFDALPAAARPPRTGDK-LAGLRLAVKDVFDIAGLRTGSGNLAWRDQQPVAART 70
Query: 109 AVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAA 168
A+ V LL+ GA IGKTV DE + + G N HYGTPVNP P+ IPGGSSSGS VAVAA
Sbjct: 71 ALAVRGLLEEGAQWIGKTVTDELTYSLAGVNAHYGTPVNPADPARIPGGSSSGSVVAVAA 130
Query: 169 QLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILH 228
D ALGTD G VR+PAS+CG+ G RP+HG ++ G L + S DTVG AR+ L
Sbjct: 131 GHADIALGTDCGGSVRLPASYCGVWGMRPTHGRIATDGCLTLAHSFDTVGWFARDGRTLA 190
Query: 229 RVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVG 288
+ VL AR ++ A D +HV + + Q
Sbjct: 191 DIFEVL----------ARSVVMAGD--------GPFALHVPRNLLACVDA-QVAARFEAS 231
Query: 289 QYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYN 348
+ +V + +PE A+L + +LQ E Y W + G +
Sbjct: 232 LQVLGDVVTF-------VAPE---ASLADWAQAFRALQAAEIAQRYGPWAREHAASFGPD 281
Query: 349 VFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSA 408
V R ++ T + I +VR E A+ L ++PTV + +
Sbjct: 282 VGARFAMSLTITPEQIADAQRVRVEAIRAMADALPQGSYWLVPTVPGVAPRADASAQTVD 341
Query: 409 EFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
R+ + + ++G QV +P ++ P+ +S I G D+ +L T ++++++
Sbjct: 342 NTRARSQQMLCVAGLAGLPQVNMPWMSFDGAPVGLSLIGARGADEGVLRTARAVHEAMR 400
>gi|296446117|ref|ZP_06888065.1| Amidase [Methylosinus trichosporium OB3b]
gi|296256311|gb|EFH03390.1| Amidase [Methylosinus trichosporium OB3b]
Length = 397
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 141/391 (36%), Positives = 188/391 (48%), Gaps = 36/391 (9%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLA +F +K DV G V+ G P W H A A V LL GA +GK +DE
Sbjct: 25 PLASARFVVKQNIDVDGVVSSNGHPTWAATHGPAPIAAPAVDRLLAAGAHLVGKAHMDEM 84
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+ + G N HYG P+NP P PGGSSSGSAVAVAA L DFALGTDT G R PASFCG
Sbjct: 85 AYSLLGANAHYGAPLNPAAPDRHPGGSSSGSAVAVAAGLADFALGTDTAGSCRAPASFCG 144
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
+ G+RPSHG VS GV+P +QSLDT+G AR+ +L RVG VLL + + R++
Sbjct: 145 VYGFRPSHGAVSSNGVIPLAQSLDTIGWFARDVDMLARVGAVLLPEDLCD-GPFERVVAL 203
Query: 252 DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENG 311
++ F S +T A E+L+ + +G+ S SL R
Sbjct: 204 EEAFAQSDA---ETNEAARPAREALARMYSVGEARLGEDFWSQ--SLHCFR--------- 249
Query: 312 TATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVR 371
+LQ +E + W++ A PR G V ER A T R
Sbjct: 250 ------------NLQAFEAWSAQGAWIERAAPRFGPGVAERFALAAKVTASEKAEADAFR 297
Query: 372 NEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSS----IGSMSGCC 427
R + +L + +LV+PT P ++ T S E DR L S G
Sbjct: 298 RAARMRVDEILPPNAVLVVPTT---PF-VSPLLTESEEELDRKRYLMFRTFLFASFFGLP 353
Query: 428 QVAIPIGKY-NEHPISISFITYHGGDKFLLD 457
Q++IP+ + P+ IS I D+ L++
Sbjct: 354 QISIPLPRAPGAPPLGISLIGPRWSDRRLIE 384
>gi|91779038|ref|YP_554246.1| amidase [Burkholderia xenovorans LB400]
gi|91691698|gb|ABE34896.1| Putative amidase [Burkholderia xenovorans LB400]
Length = 405
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 202/420 (48%), Gaps = 31/420 (7%)
Query: 50 GAFL-ERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERT 108
GAF+ + F +P PP + L G A+KDVFD+ G TG G+ W+ A RT
Sbjct: 13 GAFVADGFNALPAAALPPRTGTR-LVGRSLAVKDVFDIAGLRTGSGNLAWRAAQPVAART 71
Query: 109 AVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAA 168
A+ V LL+ GA IGKT+ DE + + G N HYGTPVNP P+ IPGGSSSGSAVAVAA
Sbjct: 72 ALAVRALLEEGAQWIGKTLTDELTYSLAGVNAHYGTPVNPADPARIPGGSSSGSAVAVAA 131
Query: 169 QLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILH 228
Q D A+GTD G VR+PAS+CGI G R +HG ++ G L + S DTVG AR+A L
Sbjct: 132 QHADIAIGTDCGGSVRLPASYCGIWGIRATHGRIAGDGCLTLAHSFDTVGWFARDAHTLA 191
Query: 229 RVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVG 288
V VL AR ++ DD VP+ H+++ A E ++ +G
Sbjct: 192 DVFEVL----------ARSIVTWDDEPFTLHVPR----HLLACADEEVATRFEASLQALG 237
Query: 289 QYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYN 348
++ P A+L + LQ E Y W + G +
Sbjct: 238 DNVSFVSPD---------------ASLAQWAQAFRVLQAAEIAQRYGHWAREHASSFGAD 282
Query: 349 VFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSA 408
V R ++ T++ + +VR + A+ L ++PTV + +
Sbjct: 283 VGARFAASLTITREQVADAQRVRVQANRAMAEALAPGTYWLVPTVPGVAPRADASAQAVD 342
Query: 409 EFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQE 468
R+ + + ++G QV++P + P+ +S I G D+ +L +++++++
Sbjct: 343 HTRARSQQMLCVAGLAGLPQVSMPWTTIDGAPVGMSVIGGRGTDEGVLRVARTVHEAMRK 402
>gi|377807550|ref|YP_004978742.1| amidase [Burkholderia sp. YI23]
gi|357938747|gb|AET92304.1| Amidase [Burkholderia sp. YI23]
Length = 401
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 140/419 (33%), Positives = 204/419 (48%), Gaps = 31/419 (7%)
Query: 50 GAFL-ERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERT 108
GAF+ + F +P P PP LA L+ A+KDVFD+ G TG G+P W+ A RT
Sbjct: 13 GAFVADGFGSLP-PAALPPRTGDRLATLRLAVKDVFDIGGLRTGGGNPVWRDQQPVAART 71
Query: 109 AVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAA 168
A+ V LL+ GA +GKTV DE + + G N HYGTPVNP P+ +PGGSSSGS VAVAA
Sbjct: 72 ALAVRALLEEGAQWVGKTVTDELTYSLAGVNAHYGTPVNPADPARMPGGSSSGSVVAVAA 131
Query: 169 QLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILH 228
+ D ALGTD G VR+PAS+CG+ G RP+HG ++ G L + S DTVG AR+ L
Sbjct: 132 RHADVALGTDCGGSVRLPASYCGVWGMRPTHGRIATDGCLTLAHSFDTVGWFARDPHTLA 191
Query: 229 RVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVG 288
+ VL Q + V P DD F + VP+ L+ P V
Sbjct: 192 LMFEVLAQ-SVVGPD--------DDAFAV-HVPR-----------NLLACADAP----VA 226
Query: 289 QYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYN 348
+++ +L G RA +P A+L + LQ E Y W + G +
Sbjct: 227 ARFEASLEAL-GERASFVAPR---ASLPDWAQAFRVLQAGEIAQRYGAWAREHSASFGAD 282
Query: 349 VFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSA 408
V R ++ T++ I +VR E A+ L ++PTV + +
Sbjct: 283 VGARFAMSLTITREQIAEAQRVRIEAIHAMAEALPHGTYWLVPTVPGAAPRTDASAETVD 342
Query: 409 EFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
R + + ++G QV++P + P+ +S I G D+ +L +++ ++
Sbjct: 343 HTRARAQQMLCVAGLAGLPQVSMPWTRIGGAPVGVSVIGARGADEGVLRVARAVHELMR 401
>gi|404330636|ref|ZP_10971084.1| Amidase [Sporolactobacillus vineae DSM 21990 = SL153]
Length = 395
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 132/423 (31%), Positives = 209/423 (49%), Gaps = 34/423 (8%)
Query: 48 DFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAER 107
D+GAF++ I PL GL FA+KDVF VKGY G+P W A
Sbjct: 6 DYGAFIDHSLHIS------SGNSGPLGGLHFAVKDVFSVKGYKNTAGNPTWLEHAKRASE 59
Query: 108 TAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVA 167
A V LL GA +G TV DE + + G+NKH+ +NP+ + GGSSSGSAVAVA
Sbjct: 60 NADAVDRLLTEGAALVGTTVTDELMYSLKGDNKHFPPTINPKAQNCYTGGSSSGSAVAVA 119
Query: 168 AQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASIL 227
+ DFA+GTDT G VRVP+S+CGI G RPSHG +SM GV+P + S DTV ++ +A L
Sbjct: 120 SHQTDFAMGTDTGGSVRVPSSYCGIFGMRPSHGRISMKGVIPLAPSFDTVSWMSGSADTL 179
Query: 228 HRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNV 287
+VG L L +P R +F + +KA E + Q+P+
Sbjct: 180 SKVG---LSLLPNQPVHTYRHLF-----------------IFNKAFELV---QDPDDFTD 216
Query: 288 GQYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGY 347
+ + L++ ++ + + L+ LQ E + +W+++ P G
Sbjct: 217 FTRLLRLIKERYKLQSVDLMQDH---SFEELTECFRILQGREAWLSHGKWIQACHPDFGK 273
Query: 348 NVFERVLEAINTTQDN-IKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTY 406
++ ER A +D + ++ E A +++LL D +++IPT +
Sbjct: 274 DIAERFESASKIKEDEAYSQMLSLKREFTAEMRKLLGTDSMVLIPTTPGTAPERGGDFVT 333
Query: 407 SAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSL 466
+ + +T+ L+ + +SG Q+ P + ++ P+ +SFI+ + D+ LL V ++ D
Sbjct: 334 AEQLRSKTMKLTCLAGLSGVPQITAPF-RQSKKPLGLSFISGYNTDRQLLSFVTEIGDLF 392
Query: 467 QEQ 469
+
Sbjct: 393 SDH 395
>gi|423683871|ref|ZP_17658710.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus
licheniformis WX-02]
gi|383440645|gb|EID48420.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Bacillus
licheniformis WX-02]
Length = 392
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 143/404 (35%), Positives = 200/404 (49%), Gaps = 40/404 (9%)
Query: 48 DFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAER 107
D+ AF+ R + PP+A L L FA+KDVF V+G+ G+PDW R H AE+
Sbjct: 4 DWSAFINRDLTVD-----PPSAEGSLKKLSFAVKDVFAVEGHANAAGNPDWLRTHEPAEK 58
Query: 108 TAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVA 167
A V LLL+ GA G DE + + GEN HYGTPVNP IPGGSSSGSAVA A
Sbjct: 59 NAEAVDLLLREGARLKGAAHTDELMYSLDGENVHYGTPVNPCAMDKIPGGSSSGSAVAAA 118
Query: 168 AQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASIL 227
+ + DFALGTDT G VR+P+S+CGI G+RP+HG VS+ GV+P ++S DTVG ++++ +L
Sbjct: 119 SGMTDFALGTDTGGSVRIPSSYCGIFGFRPTHGEVSVDGVIPLAKSFDTVGWMSKDIGVL 178
Query: 228 HRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNV 287
H G VLL R+ F + + L E +
Sbjct: 179 HAAGRVLLSGQEEAGACFNRVYFEKEAWSLL------------------------EESDR 214
Query: 288 GQYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEE---WVKSAKPR 344
Q A + + G + + G A V+ L+ I+EE W++ P
Sbjct: 215 TQVYAYALGLIDGEFDWCVAADGGLAEWAETFRVLQGLE------IWEEHGAWIERTNPV 268
Query: 345 LGYNVFERVLEAIN-TTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTK 403
G + ER A + D+++ K R R L L +D +LVIPT PP
Sbjct: 269 FGPGIAERFEWASSLVISDHVQAFMK-REAARKRLSEWLGEDGLLVIPTAPGPPPLRGLP 327
Query: 404 KTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFIT 447
+ E RT+ L+ I + G Q+ +P+ N P+ +SFI
Sbjct: 328 ENELNERRARTMKLTCIAGLGGLPQITVPLPAKNGEPLGLSFIA 371
>gi|146341317|ref|YP_001206365.1| amidase [Bradyrhizobium sp. ORS 278]
gi|146194123|emb|CAL78142.1| putative amidase [Bradyrhizobium sp. ORS 278]
Length = 400
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 133/388 (34%), Positives = 187/388 (48%), Gaps = 33/388 (8%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL+GL FA+KD+FDV G VTG G+PDW H ER A V + GAT GKT+ DE
Sbjct: 24 PLSGLSFAVKDLFDVAGDVTGCGNPDWAACHDTPERDAWAVDAMCCAGATLTGKTITDEI 83
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
+ G+ G N+ YGTP+NP+ P +PGGSSSGSA AVA LVD ALGTD+ G VR PASFCG
Sbjct: 84 SLGLLGINRFYGTPLNPRAPDRVPGGSSSGSASAVAGGLVDVALGTDSGGSVRTPASFCG 143
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ---LNAVEPRRARRL 248
I G RP+HG +S+ G++ + S DTVG R+A RVG VLL + ++P +
Sbjct: 144 IYGLRPTHGRISVAGLMTQAPSFDTVGYFTRDALTFGRVGSVLLAEPIADGLQP----DI 199
Query: 249 IFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSP 308
+ A D F L+ P + + + S+ A +T
Sbjct: 200 VIASDCFALADEPVRAALQPVVARLRSV--------------------------APATEA 233
Query: 309 ENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILY 368
L A LQ+ EF + +W+ PR V + ++
Sbjct: 234 ALADGELLAWGRHQRVLQKSEFHATFRDWIDRVNPRFSSEVAGAFADDGRIAPQDLATAE 293
Query: 369 KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQ 428
R L +L ++L +PT P+ + + R + L+ I ++G Q
Sbjct: 294 VFRAAASKRLDDVLDGRRMLCLPTTPILPIARDAGLSEMRTAVHRIVDLTCIAGLTGLPQ 353
Query: 429 VAIPIGKYNEHPISISFITYHGGDKFLL 456
V +P+ P+ +S I + GGD LL
Sbjct: 354 VNLPVATSGAVPVGLSLIGWRGGDASLL 381
>gi|260770441|ref|ZP_05879374.1| amidase [Vibrio furnissii CIP 102972]
gi|260615779|gb|EEX40965.1| amidase [Vibrio furnissii CIP 102972]
Length = 393
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 134/405 (33%), Positives = 204/405 (50%), Gaps = 29/405 (7%)
Query: 62 PQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGAT 121
P P A+ L+G +F KD+FDV+GY TG G+P W + H A T+ ++T LL GA
Sbjct: 13 PDTLPATAQGTLSGTRFVFKDLFDVEGYATGAGNPTWLKTHQMATATSPLITALLGQGAE 72
Query: 122 CIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIG 181
C+G+ DE A+ + G+N HYGTP+NP+ P+ IPGGSSSGSAVAVA DFA+GTDT G
Sbjct: 73 CVGRVQTDELAYSLNGQNSHYGTPINPKAPNCIPGGSSSGSAVAVAKNDCDFAIGTDTGG 132
Query: 182 CVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVE 241
+RVPAS+CG+ G RP+ GT+ + ++S DT G+ R+ ++ V VL+ +
Sbjct: 133 SIRVPASYCGLFGLRPTLGTLDLSHCFELAKSFDTAGIFTRDLRLMRDVWSVLVARHQSG 192
Query: 242 PRRARRLIFADDIFQLSKVPKLKTIHVISKA-IESLSGYQNPEHMNVGQYIASNVPSLKG 300
R R ++ D Q V+S A +E LS Q + + + I NV + G
Sbjct: 193 ERVTR--VYLDAQCQA----------VMSAARLERLS--QQCQRAGI-EIIQGNVLAQNG 237
Query: 301 LRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTT 360
+L LS + ++Q +E ++ W+ L + ERV A T
Sbjct: 238 W------------SLTDLSLLFRTIQGFEIIEHHDAWLTQYGDSLDPAIGERVEWARTIT 285
Query: 361 QDNIKILYKVRNEMRAALQRLLKDDKIL-VIPTVSDPPLKLNTKKTYSAEFHDRTLVLSS 419
+ + + + + LK + L IPT P L A + + + L+S
Sbjct: 286 CEQYDHAKGRQQDFQQQILTHLKQQRCLWAIPTTPSGPPSLTMPAGELAVYRSQLMGLTS 345
Query: 420 IGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYD 464
I +SG Q+ +P+ + E P IS + ++ LL T +Y+
Sbjct: 346 IAGLSGLPQLHLPMEELLEGPCGISLMGLPHQEETLLVTGEAVYN 390
>gi|317127954|ref|YP_004094236.1| amidase [Bacillus cellulosilyticus DSM 2522]
gi|315472902|gb|ADU29505.1| Amidase [Bacillus cellulosilyticus DSM 2522]
Length = 395
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/385 (34%), Positives = 206/385 (53%), Gaps = 28/385 (7%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ AIKDVF +KG + G G+PDW+R H A++ A VV LL+ G T G T DE
Sbjct: 20 LKGVTVAIKDVFSIKGLIAGAGNPDWERTHEPAQKNAEVVEQLLEEGVTITGTTHTDELM 79
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
F + GEN HYGTPVNP +PGGSSSGSAVAV+A LVD +GTDT G VR+P+S+CGI
Sbjct: 80 FSLNGENYHYGTPVNPTAQERVPGGSSSGSAVAVSAGLVDVGIGTDTGGSVRIPSSYCGI 139
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRA-RRLIFA 251
G+RP+HG VS G++P + DTVG + +++ +L+ VG L +N + + + +LI
Sbjct: 140 YGFRPTHGAVSTEGLIPLASQFDTVGWMTKSSELLYDVGLTL--INQPDYKTSFTKLIVP 197
Query: 252 DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENG 311
+DI L+ +T +K ++ + G N + I + +
Sbjct: 198 EDIVSLANDECTET---FTKHLDGMKG-------NFDKVITTTL---------------A 232
Query: 312 TATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVR 371
T ++ + +LQ YE + +W+K P+ G ++ +R A +++++ R
Sbjct: 233 TEGIETWFNTFRTLQGYEVWQTHGDWIKETNPKFGPDIEDRFNWASTIKEEDVEKARLKR 292
Query: 372 NEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAI 431
+++ +Q L+ D I+++PT LN + R L+++ I + G Q+++
Sbjct: 293 AQIQNRVQELIDQDSIVLMPTAPGVAPYLNGRGEVLENQRKRMLLMTCISGLLGYPQLSL 352
Query: 432 PIGKYNEHPISISFITYHGGDKFLL 456
P+ N P+ IS I D LL
Sbjct: 353 PVMHINGIPVGISMIAAKNQDLKLL 377
>gi|375265374|ref|YP_005022817.1| amidase [Vibrio sp. EJY3]
gi|369840695|gb|AEX21839.1| amidase [Vibrio sp. EJY3]
Length = 393
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 130/382 (34%), Positives = 197/382 (51%), Gaps = 28/382 (7%)
Query: 67 PAARQ-PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGK 125
PA +Q L GL F KD+FDV+GYVTG G+P W H +AE T++++ LL GA C G+
Sbjct: 17 PALKQGSLNGLSFVFKDLFDVEGYVTGAGNPKWLETHSKAESTSLLIISLLNAGAECKGR 76
Query: 126 TVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
DE A+ + G N HYGTPVNP P +PGGSSSGSAVAVA VDF++GTDT G VRV
Sbjct: 77 VQTDELAYSLNGINVHYGTPVNPLAPDCLPGGSSSGSAVAVAKGDVDFSIGTDTGGSVRV 136
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRA 245
PAS+CG+ G RP+ G +S+ ++S DT G+ +R+ S L V + L A
Sbjct: 137 PASYCGLFGLRPTLGQLSLESSFTLAESFDTAGVFSRDLSTLENV-YACLGPETQAQTVA 195
Query: 246 RRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQS 305
+ LI LSK + ++ +E L + + ++ + +Y S
Sbjct: 196 KTLILDQ---SLSKT-------LGNERLEELKQWADSANIQL-EY--------------S 230
Query: 306 TSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIK 365
+ ++ L LS++ ++Q YE + W+ + L + ERV+ A + + +
Sbjct: 231 NALQDAGYDLGELSALFRTIQGYEIIDRHSAWLDEWQHTLAPAIQERVVWARTISAQDYR 290
Query: 366 ILYKVRNEMRAALQRLLKD-DKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMS 424
+ + + + L L D D + V+PT KL T AE+ + L+S+ +S
Sbjct: 291 KGKEQQAKFTSWLAEQLADKDTLWVLPTTPGKSPKLTTPDADLAEYRSDLMGLTSLAGLS 350
Query: 425 GCCQVAIPIGKYNEHPISISFI 446
G Q+ IP+ P +S +
Sbjct: 351 GFPQLHIPMNNVTNGPCGVSLL 372
>gi|319940606|ref|ZP_08014949.1| amidase [Sutterella wadsworthensis 3_1_45B]
gi|319805972|gb|EFW02730.1| amidase [Sutterella wadsworthensis 3_1_45B]
Length = 410
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 138/403 (34%), Positives = 207/403 (51%), Gaps = 32/403 (7%)
Query: 58 LIPFPQPPPPAARQ-PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLL 116
+P+P+ P P A++ PL GL FA+KD+FDV GY T G+P + ++TA V LL
Sbjct: 26 FMPYPEVPVPHAKEGPLTGLTFAVKDIFDVAGYPTSAGNPTFLALQGIKQKTASCVEKLL 85
Query: 117 KNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALG 176
GA GKT+ DE AF + G N H+G P+N P GGSSSGSA AV+ LVDFALG
Sbjct: 86 AAGAEFQGKTITDELAFSMQGANFHFGAPINGGAPDRYTGGSSSGSASAVSCGLVDFALG 145
Query: 177 TDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ 236
+DT G +R PAS CG++G RP+ G ++ P S+S DTVG AR + +V VL
Sbjct: 146 SDTGGSIRCPASQCGVIGLRPTVGRAALDHCQPLSKSFDTVGFFARRMEVFEKVAAVLYG 205
Query: 237 LNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVP 296
+A RLIF DDI+ L K ++L + P VG +
Sbjct: 206 QDANPEDTKPRLIFVDDIWTLFG----------DKVQQAL---KKPYEAAVGLF------ 246
Query: 297 SLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYE---EWVKSAKPRLGYNVFERV 353
SP +G + + L L+ ++ + +E ++++ P LG V ER
Sbjct: 247 ---------GSPASGQFSPQGLERTFLAFRKLQTAEAWESDGSFIETYHPVLGPGVRERF 297
Query: 354 LEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDR 413
+ A +++ +++ E RA L LLKDD + ++PT+ D + + +T+ F +
Sbjct: 298 ILAKQWHVEDLSPEREIQAECRAHLTDLLKDDGLAILPTMPDAGIPVGASETFVERFRQK 357
Query: 414 TLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+ G +SG +++P+G N PI IS + G D +L+
Sbjct: 358 VSMCLCHGGLSGFPWISLPLGTINGAPIGISLVGPKGRDLWLI 400
>gi|163792910|ref|ZP_02186886.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related
amidase [alpha proteobacterium BAL199]
gi|159181556|gb|EDP66068.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related
amidase [alpha proteobacterium BAL199]
Length = 393
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 141/388 (36%), Positives = 199/388 (51%), Gaps = 31/388 (7%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDW-KRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
PL GL FA KD+FDV G+ TG GSPDW + D +R A V LL GA +GKTV DE
Sbjct: 24 PLTGLSFAAKDLFDVAGHRTGAGSPDWGQSDPVVPDRHAWAVQTLLDAGADLVGKTVTDE 83
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
+ GI GE+ GTP+N + P +PGGSSSGSA AVAA L D A+GTDT G VRVPASFC
Sbjct: 84 VSLGILGESAFDGTPLNSKAPDRVPGGSSSGSAAAVAAGLCDTAIGTDTGGSVRVPASFC 143
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIF 250
G+ G RP+HG + + G++P + S DT G AR+A+ RV +L A+ + RLI
Sbjct: 144 GLYGIRPTHGRLPLDGMMPQAPSSDTTGWFARDAATFARVSAAMLG-EAIPSKLPTRLIV 202
Query: 251 ADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKG-LRAQSTSPE 309
A D F G+ +PE + + + + +L G R +P
Sbjct: 203 AVDAF----------------------GFADPETASALRQLLDRLSALIGDTREDLLAPP 240
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
L +LQ E +++W+ PR+ +NV ++ ++ ++
Sbjct: 241 G----LSVWGRAQRTLQPAEAYATFKDWLDRDNPRMAFNVARGLVMGSMISEADLGWARL 296
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDP-PLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQ 428
+R E RA L LL IL +PT P PLK + +R L L++ G ++G Q
Sbjct: 297 MRQEARARLTYLLPPGTILAMPTTPFPAPLK-GLPLSQQNPIRERILCLAAHGGLAGFPQ 355
Query: 429 VAIPIGKYNEHPISISFITYHGGDKFLL 456
V+IP + P+ +S + G D L+
Sbjct: 356 VSIPGAEVGSLPVGLSILAARGADAQLV 383
>gi|409407551|ref|ZP_11256002.1| hypothetical protein GWL_31560 [Herbaspirillum sp. GW103]
gi|386433302|gb|EIJ46128.1| hypothetical protein GWL_31560 [Herbaspirillum sp. GW103]
Length = 412
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 142/401 (35%), Positives = 207/401 (51%), Gaps = 28/401 (6%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA PLAGL+FA KD+FDV G+ TG G+PDW R H R+ +V LL+ GAT +GKT+
Sbjct: 36 AASGPLAGLRFAAKDLFDVAGHPTGAGNPDWLRSHPIPMRSNALVGQLLQAGATLVGKTL 95
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
DE A+ I G+N HYGTPVN P +PGGSSSGSA AVAA+L DFALGTDT G RVPA
Sbjct: 96 TDELAYSIHGDNHHYGTPVNSAAPDRVPGGSSSGSAAAVAARLCDFALGTDTGGSTRVPA 155
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
S+CG+ G R S G +S + P S DT LA + RVG VLL + R+
Sbjct: 156 SYCGVWGLRTSFGLLSTASMAPLCPSFDTATWLAHDPDTFERVGQVLLPKTGS--LQVRK 213
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
++ D+ +L++ P+ + V+ + ++L EHM + S
Sbjct: 214 VLLPFDLLELAE-PEFQP--VVQRVYDALRSELPGEHMRM-------------------S 251
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
E G L+ + ++ + W+ SA+P G V R A + + D +
Sbjct: 252 GEEG--ELEKWRMAYIKASAFDAWQCHGAWISSARPVFGSAVQARWDMAQHISADTARAA 309
Query: 368 YKVRNEMRAALQRLLKDDKILVIPTVSD-PPLKLNTKKTYSAEFHDRTLVLSSIGSMSGC 426
+ ++ +R ++ LL D + V+P+ S PL+ + E RT L+ + ++G
Sbjct: 310 REKQDLVRHRVRSLLGADGVAVMPSASSVAPLR-DASAAAIDEVRARTFGLTCVAGLAGL 368
Query: 427 CQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
QV++P PI +S + G D L+ L+ +LQ
Sbjct: 369 PQVSMPFTTPAGLPIGVSLLGPAGSDLALIGLATRLWRNLQ 409
>gi|84517181|ref|ZP_01004536.1| amidase [Loktanella vestfoldensis SKA53]
gi|84508856|gb|EAQ05318.1| amidase [Loktanella vestfoldensis SKA53]
Length = 392
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 134/389 (34%), Positives = 181/389 (46%), Gaps = 30/389 (7%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA PLAGL A+KD+FDV GY TG G P A +TA LL GA +GKT
Sbjct: 22 AADGPLAGLTLAVKDIFDVAGYRTGSGCPTRLAQSPVARKTASAAQRLLDAGAQFVGKTH 81
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
DE A+ + G N H+GTPVNP P IPGGSSSGSAVAVA L D A+G+DT G VR PA
Sbjct: 82 TDELAWSMYGMNAHFGTPVNPAAPDRIPGGSSSGSAVAVAGGLADIAIGSDTGGSVRAPA 141
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
SFCGI G RP+HG V + GV P + S D VGL AR+ + L R LL +
Sbjct: 142 SFCGIWGLRPTHGRVCLDGVQPLAPSYDAVGLFARDGATLARAADALLGPDT-------- 193
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
+ +P + + I L+ Q +++V L+AQ
Sbjct: 194 ----------AALPPNPVLLRPTDMIAQLAAEQQAIYVSV----------FGALQAQDV- 232
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
E + A+ + L+ + K W+K++ L + RV A + I
Sbjct: 233 -EVFPQGVAAVYDIFLTTISGDAKAAIVPWIKASGMPLVRGIHGRVAAAEQLAEAQIADA 291
Query: 368 YKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCC 427
K R A + LL D +L+ P V + P +L+ + + L + + G
Sbjct: 292 RKARANYAAKIVALLGDTGVLLAPVVPEAPFRLDAPIEVFDTYRHDAMRLLCVAGLVGLP 351
Query: 428 QVAIPIGKYNEHPISISFITYHGGDKFLL 456
QV P G + P +S I G D L+
Sbjct: 352 QVTFPAGSIDGAPFGLSLIGPRGSDLSLI 380
>gi|385204948|ref|ZP_10031818.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. Ch1-1]
gi|385184839|gb|EIF34113.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. Ch1-1]
Length = 399
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 140/402 (34%), Positives = 197/402 (49%), Gaps = 34/402 (8%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
A PL GL+FA+KD+ DV TG G+P W H A A V LL GA GKT+
Sbjct: 16 ASGPLNGLRFAVKDLIDVASVTTGGGNPGWLASHAAARAHARCVDTLLAAGAALDGKTIT 75
Query: 129 DEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPAS 188
DE A+ + GEN HYGTP+NP+ P +PGGSSSGSA AVA VDFALGTDT G VRVPA+
Sbjct: 76 DELAYSLEGENHHYGTPLNPRWPHALPGGSSSGSASAVANGEVDFALGTDTGGSVRVPAA 135
Query: 189 FCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRL 248
FCG+ G RPSH + + GVLP + DTVG AR+ +L VG VLL +
Sbjct: 136 FCGLFGMRPSHDAIPLDGVLPFAPCFDTVGWFARSIDVLAAVGDVLLPV----------- 184
Query: 249 IFADDIFQLSKVPKLKTIHVISKAI------ESLSGYQNPEHMNVGQYIASNVPSLKGLR 302
P T + +A+ E+ + + E + A+ + +L
Sbjct: 185 -----------APSASTAYASGRAVRLTRVAEAFAARERNEADD-----AARLTALAERL 228
Query: 303 AQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQD 362
TS + + ++Q E W++SA+PR G + R +
Sbjct: 229 GARTSLDVFAGNQARWLACYQAVQDLEIDASLGAWIRSAQPRFGPGIAPRFARLDTLDRQ 288
Query: 363 NIKILYKVRNEMRAALQRLLKDDK-ILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIG 421
V +E+R+AL L + D+ +LV+PT L N F++ +L ++SI
Sbjct: 289 QAAQWRTVLHELRSALNTLFEIDRTVLVMPTTPVALLPKNASGDTIGRFYEDSLTMNSIA 348
Query: 422 SMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLY 463
+ G Q+ +P + P+++S I G D+ LL DLY
Sbjct: 349 AFGGLPQITLPFADELDRPLALSLIGARGSDRALLSLARDLY 390
>gi|385205231|ref|ZP_10032101.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. Ch1-1]
gi|385185122|gb|EIF34396.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. Ch1-1]
Length = 405
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/423 (31%), Positives = 200/423 (47%), Gaps = 31/423 (7%)
Query: 50 GAFL-ERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERT 108
GAF+ + F+ +P PP + L G A+KDVFD+ G TG G+ W+ A RT
Sbjct: 13 GAFVADGFDALPAAALPPRTGTK-LVGRSLAVKDVFDIAGLRTGSGNLAWRAAQPVAART 71
Query: 109 AVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAA 168
A+VV LL+ G IGKT+ DE + + G N HYGTPVNP + IPGGSSSGSAVAVAA
Sbjct: 72 ALVVRALLEEGVQWIGKTLTDELTYSLAGVNAHYGTPVNPADAARIPGGSSSGSAVAVAA 131
Query: 169 QLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILH 228
Q D A+GTD G VR+PAS+CGI G R +HG ++ G L + S DTVG AR+A L
Sbjct: 132 QHADIAMGTDCGGSVRLPASYCGIWGMRATHGRIAGDGCLTLAHSFDTVGWFARDARTLA 191
Query: 229 RVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVG 288
V VL AR ++ D + T+HV +
Sbjct: 192 DVFEVL----------ARSIVTWDG--------EPFTLHVPRNLLACADAEVATRFEASL 233
Query: 289 QYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYN 348
Q + NV + SP+ A+L + LQ E Y W + G +
Sbjct: 234 QALGDNVSFV--------SPD---ASLAQWAQAFRVLQAAEIAQRYGHWAREHASSFGAD 282
Query: 349 VFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSA 408
V R ++ T++ I +VR E A+ L ++PTV + +
Sbjct: 283 VGARFAASLTVTREQIADAQRVRVEANRAMAEALAPGTYWLVPTVPGVAPRADASAQAVD 342
Query: 409 EFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQE 468
R+ + + ++G QV++P ++ P+ +S I G D+ +L ++++ ++
Sbjct: 343 HTRARSQQMLCVAGLAGLPQVSMPWTTFDGAPVGMSVIGGRGTDEGVLRVARIVHEATRK 402
Query: 469 QVN 471
+
Sbjct: 403 SLR 405
>gi|407781884|ref|ZP_11129100.1| amidase [Oceanibaculum indicum P24]
gi|407206923|gb|EKE76867.1| amidase [Oceanibaculum indicum P24]
Length = 392
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 142/390 (36%), Positives = 196/390 (50%), Gaps = 35/390 (8%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL+GL FA KD+FD++G+VTG G+PDW H A TA V LL GA+ GKT+ DE
Sbjct: 25 PLSGLTFAAKDLFDIEGHVTGAGNPDWLATHAPATATASSVRKLLDAGASLYGKTITDEL 84
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+ + G N HYGTPVNP P +PGGSSSGSA AVA LVD ALGTDT G +RVPA+ CG
Sbjct: 85 AYSLAGVNMHYGTPVNPAGPDRLPGGSSSGSASAVAGGLVDTALGTDTGGSIRVPANNCG 144
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRA---RRL 248
+ G R +HG V+ G++P + S DTVG R+A + R+G VLL PR + RL
Sbjct: 145 LYGIRTTHGRVAKDGLVPLADSFDTVGWFTRDARTMARIGEVLLG-----PRESFPDGRL 199
Query: 249 IFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSP 308
+ A D F L + ++ L P H + +P
Sbjct: 200 VIATDCFDLVSA---DVRAALKPLVDRLIAAVGPRHY------------------ATLNP 238
Query: 309 ENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILY 368
+ A + Q +E + EW+ KP++ + ER T + +
Sbjct: 239 DGFDVWFAAFRQI----QGHEAWQAHGEWIAKTKPKMAPEIAERFNLGRQVTAEQVAEAG 294
Query: 369 KVRNEMRAALQRLLKDDKILVIPTVSDP-PLKLNTKKTYSAEFHDRTLVLSSIGSMSGCC 427
KVR + R L +L+ +L +P S P PLK + A + L L+ G ++G
Sbjct: 295 KVREKARQRLAAMLQPGDVLCLPASSGPAPLKSMSGAAEGA-YRAAMLKLTCTGGLTGMP 353
Query: 428 QVAIPIGKYNEHPISISFITYHGGDKFLLD 457
Q+ +P+ K + P+ IS G D LLD
Sbjct: 354 QMTLPLAKLDGCPLGISIAGLPGSDWMLLD 383
>gi|53804699|ref|YP_113430.1| amidase [Methylococcus capsulatus str. Bath]
gi|53758460|gb|AAU92751.1| amidase family protein [Methylococcus capsulatus str. Bath]
Length = 341
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/350 (36%), Positives = 176/350 (50%), Gaps = 24/350 (6%)
Query: 110 VVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQ 169
+ V L+ GA C+GKT DE AFG+TGEN YGTP+NP P +PGGSSSGSAVAVAA
Sbjct: 1 MCVEQCLQAGAVCLGKTCADELAFGLTGENAFYGTPLNPAAPDRVPGGSSSGSAVAVAAG 60
Query: 170 LVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHR 229
VDFALGTDT G +R+PAS CGI G RPSHG VS+ GV P + DTVG ARN L R
Sbjct: 61 EVDFALGTDTAGSIRLPASNCGIWGMRPSHGGVSVAGVNPLAPGFDTVGAFARNGETLQR 120
Query: 230 VGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQ 289
V +LL ++ + + RL + F ++ K + K
Sbjct: 121 VMSLLLNVDPLS-TVSGRLWLLQEGFDAAEPAVRKAFGPVLK------------------ 161
Query: 290 YIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNV 349
+A + PS + + +S E G + + V +Q E + W++SA+P LG
Sbjct: 162 RLAGSFPS-REISLRSIDGEAGVSGMDNWRQVFQPIQWAEIWSTLGTWIESARPALGERT 220
Query: 350 FERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDP-PLK--LNTKKTY 406
A + + R RAAL R+L + ++ PTV P PLK L +T
Sbjct: 221 RRNFELAKGLDRRLLPAALARRERYRAALARVLGPEDVICFPTVHAPAPLKGSLGLDRT- 279
Query: 407 SAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
++ R L +I + Q+++P + P+ +S + G D FL+
Sbjct: 280 QGDYFPRVLARMAIAGICRLPQISLPAVEVEGAPVGLSLLAAEGNDAFLM 329
>gi|119946077|ref|YP_943757.1| amidase [Psychromonas ingrahamii 37]
gi|119864681|gb|ABM04158.1| Amidase [Psychromonas ingrahamii 37]
Length = 398
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/414 (31%), Positives = 206/414 (49%), Gaps = 40/414 (9%)
Query: 62 PQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGAT 121
PQ P + L+G F KD+FDVKGYVTG G+P W H+ AE+T+ ++ LL GA
Sbjct: 17 PQRLLPISEGLLSGYTFVFKDLFDVKGYVTGAGNPTWLETHNMAEQTSPLILALLSQGAN 76
Query: 122 CIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIG 181
C+G+ DE A+ + G+N HYGTPVNP P+ +PGGSSSGSAVAVA++ DF++GTDT G
Sbjct: 77 CVGRVQSDELAYSLNGQNIHYGTPVNPIAPNCLPGGSSSGSAVAVASKDADFSIGTDTGG 136
Query: 182 CVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVE 241
VRVPAS+CG+ G RP+ ++ ++S DT G+ R+ ++H+V V L V+
Sbjct: 137 SVRVPASYCGLYGLRPTLAKFNLEHCFELAKSFDTAGIFTRDLDLMHKVFEV-LNGAPVK 195
Query: 242 PRRARRLIFADDIFQLSKVPKLKTIHV--ISKAIESLSG-YQNPEHMNVGQYIASNVPSL 298
A+ L + +LK + V I I L+G + H+
Sbjct: 196 GESAQTLYLDKTLAAQLSDQRLKRLQVCCIEAGITLLNGDFLAKYHL------------- 242
Query: 299 KGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAIN 358
+L+A+S + ++Q YE + EW+ L ++++RV +
Sbjct: 243 ---------------SLEAISLLFRTVQGYEIIAKHREWLAEFGHSLEPSIYQRVEWSRT 287
Query: 359 TTQDNIKILYKVRNEMR-AALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVL 417
+ + K + + R L + + ++PT P L+ A++ + L
Sbjct: 288 ISAEQYTQAKKRQTDFRLQLTVLLQQQGGLWLVPTTPSGPPSLSLAGDQLAKYRSNLMGL 347
Query: 418 SSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVN 471
+SI +SG Q+ +PI E P IS + L D+ DL+ + Q+ +
Sbjct: 348 TSIAGLSGFPQLHLPIKGLEEGPCGISLLG-------LPDSEGDLFATAQQLIQ 394
>gi|375132337|ref|YP_005048745.1| amidase [Vibrio furnissii NCTC 11218]
gi|315181512|gb|ADT88425.1| Amidase [Vibrio furnissii NCTC 11218]
Length = 393
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 130/399 (32%), Positives = 202/399 (50%), Gaps = 29/399 (7%)
Query: 62 PQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGAT 121
P+ P A+ L+G +F KD+FDV+GY TG G+P W + H A T+ ++T LL GA
Sbjct: 13 PETLPATAQGTLSGTRFVFKDLFDVEGYATGAGNPTWLKTHQIATATSPLITALLGQGAE 72
Query: 122 CIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIG 181
C+G+ DE A+ + G+N HYGTP+NP+ P+ IPGGSSSGSAVAVA + DFA+GTDT G
Sbjct: 73 CVGRVQTDELAYSLNGQNSHYGTPINPKAPNCIPGGSSSGSAVAVANEECDFAIGTDTGG 132
Query: 182 CVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVE 241
+RVPAS+CG+ G RP+ GT+ + ++S DT G+ R+ ++ V VL+
Sbjct: 133 SIRVPASYCGLFGLRPTLGTLDLSHCFELAKSFDTAGIFTRDLRLMRDVWSVLVARRQSG 192
Query: 242 PRRARRLIFADDIFQLSKVPKLKTIHVISKA-IESLSGYQNPEHMNVGQYIASNVPSLKG 300
R R ++ D Q V+S A +E LS Q + + + I ++ + G
Sbjct: 193 ERVTR--VYLDAQCQA----------VMSAARLECLS--QQCQRAGI-EIIQGHILAQNG 237
Query: 301 LRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTT 360
+L LS + ++Q +E ++ W+ L ++ ERV A T
Sbjct: 238 W------------SLTDLSLLFRTIQGFEIIEHHDMWLTQYGDSLDPSIGERVEWARTIT 285
Query: 361 QDNIKILYKVRNEMRAALQRLLKDDKIL-VIPTVSDPPLKLNTKKTYSAEFHDRTLVLSS 419
+ + + + + LK + L IPT P L A + + + L+S
Sbjct: 286 CEQYDHAKGRQQDFQQQILTHLKQQRCLWAIPTTPSGPPSLTMPADELAVYRSQLMGLTS 345
Query: 420 IGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDT 458
I +SG Q+ + + + E P IS + ++ LL T
Sbjct: 346 IAGLSGLPQLHLSMEELLEGPCGISLMGLPHQEETLLVT 384
>gi|388256728|ref|ZP_10133909.1| amidase [Cellvibrio sp. BR]
gi|387940428|gb|EIK46978.1| amidase [Cellvibrio sp. BR]
Length = 397
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 130/404 (32%), Positives = 193/404 (47%), Gaps = 27/404 (6%)
Query: 60 PFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNG 119
P +P P A LAGL+ +KD+F + G T G+PDW H E+T+ VVT LL G
Sbjct: 15 PNTKPNPCAESGRLAGLRLGVKDLFHIAGLPTAAGNPDWLASHPTPEQTSPVVTQLLNAG 74
Query: 120 ATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDT 179
+GKT DE A+ + G N HYG P+NP P +PGGSSSGSAVAVAA +D LGTDT
Sbjct: 75 TELVGKTQTDELAYSLNGLNIHYGAPINPACPECLPGGSSSGSAVAVAAGDIDIGLGTDT 134
Query: 180 IGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNA 239
G +RVPAS+ G+ G R SHG +S ++P + DTVG L R+A L +VG VLL
Sbjct: 135 GGSIRVPASYNGLFGIRTSHGLISSEQMVPLAPLFDTVGWLTRDAETLAQVGEVLLPAE- 193
Query: 240 VEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLK 299
+ PR R + A + L +PEH + + +P++K
Sbjct: 194 LAPRFPHRSLRAALLLPLQN-----------------GVLWSPEHQAWLKQ-QTLLPAVK 235
Query: 300 GLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINT 359
+ S L S +LQ + EW+ + +P ++ R
Sbjct: 236 PILLNSD-------WLTRASQCFRTLQGRAIWQTHGEWITANQPTFAPDIHTRFQWCATL 288
Query: 360 TQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSS 419
T + R ++A ++ D ++++PT P L + + + + L++
Sbjct: 289 TDADQTAAETERASLQADIEGWFTDVDLILLPTTPGPAPLLGADSQWMDSYRSQLMGLTA 348
Query: 420 IGSMSGCCQVAIPIGKYNE-HPISISFITYHGGDKFLLDTVLDL 462
++G QV +P+ + + P +S + G DK LL LDL
Sbjct: 349 PAGLAGLPQVHLPVLRDEQGAPYGVSLLGRRGDDKALLQLALDL 392
>gi|186473369|ref|YP_001860711.1| amidase [Burkholderia phymatum STM815]
gi|184195701|gb|ACC73665.1| Amidase [Burkholderia phymatum STM815]
Length = 400
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 138/423 (32%), Positives = 193/423 (45%), Gaps = 39/423 (9%)
Query: 50 GAFL-ERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERT 108
GAF+ + F+ +P PP + LAGL+ A+KDVFD+ G TG G+ W+ + RT
Sbjct: 12 GAFVADGFDALPAAARPPRVGDK-LAGLRLAVKDVFDIAGLRTGSGNLAWRDEQPVGLRT 70
Query: 109 AVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAA 168
A+ V LL+ A IGKTV DE + + G N HYGTPVNP P+ IPGGSSSGSAVAVAA
Sbjct: 71 ALAVRALLEEDARWIGKTVTDELTYSLAGVNAHYGTPVNPADPARIPGGSSSGSAVAVAA 130
Query: 169 QLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILH 228
D ALGTD G VR+PAS+CG+ G RP+HG V+ G L + S DTVG AR+A L
Sbjct: 131 GHADIALGTDCGGSVRLPASYCGVWGMRPTHGRVASDGCLTLAHSFDTVGWFARDARRLA 190
Query: 229 RVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVG 288
V VL + +E L + P L A+ + P+
Sbjct: 191 DVFEVLARSIVMERDEPINLHVPRSLLACVDAPVLACFEASLPALGDAVTFVEPK----- 245
Query: 289 QYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYN 348
A+L + LQ E Y W G +
Sbjct: 246 ------------------------ASLVDWAQAFRVLQAAEIAQRYGVWAYEHAASFGRD 281
Query: 349 VFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSA 408
V R + T + I +VR E + L D ++PTV + + SA
Sbjct: 282 VGARFAMSRTITCEQIADAQRVRVEAIRTMADALAQDTYWIVPTVP----GVAPRADASA 337
Query: 409 EFHDRTLVLSS----IGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYD 464
E D T S + ++G QV++P + P+ +S I G D+ +L ++
Sbjct: 338 ETVDHTRARSQQMLCVAGLAGLPQVSMPWTRIEGAPVGLSLIGARGTDEGVLRAARAVHA 397
Query: 465 SLQ 467
+++
Sbjct: 398 AMR 400
>gi|88798441|ref|ZP_01114026.1| amidase [Reinekea blandensis MED297]
gi|88778881|gb|EAR10071.1| amidase [Reinekea sp. MED297]
Length = 404
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 131/410 (31%), Positives = 199/410 (48%), Gaps = 43/410 (10%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAG++ A+KD+F V GY G+PDW R H A +TA V L+ G+ G T DE A
Sbjct: 30 LAGVRLAVKDLFAVAGYTNTAGNPDWLRTHGPATKTADAVQRLMDAGSVFCGFTQTDELA 89
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+ + G N+H+G NP++P H GGSS GSA AV ++ D LGTDT G +RVPAS+CG+
Sbjct: 90 YALEGNNEHFGKSENPKLPGHACGGSSMGSAAAVGSRWADVGLGTDTGGSIRVPASYCGL 149
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G RPSHG VS G++ + DTVG A +A++L +VG VLL A R +
Sbjct: 150 YGLRPSHGVVSTDGLIGLAPRFDTVGWFAGDAALLRQVGEVLLP--------ADRPVGKP 201
Query: 253 DIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGT 312
D + +++S+A+ + G+ + + + L G+ Q+ + + G
Sbjct: 202 DTLSVDP-------YLMSQALG-----------HCGEALNTVIDRLSGVFGQTRTVDLGL 243
Query: 313 ATLKA-LSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVR 371
A L+ V LQ + +W+ + +P + ER+ A+ T ++ R
Sbjct: 244 QQRFANLNDVFRVLQGRAIAHYHGDWLNATQPTFSKPITERLRMALALTDAEVEQAESQR 303
Query: 372 NEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAI 431
A +Q L DD +L++PT KL ++E + L L++I ++G QV +
Sbjct: 304 QAFHAHVQEQLGDDGVLLLPTTPSTAPKLGED---TSELRPKLLTLTAISGLTGSAQVHL 360
Query: 432 PI-----GKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNL 476
P+ + P S + G D LL L E V A NL
Sbjct: 361 PLMPLARKHHPSRPYGFSLLMPSGQDHTLL--------RLSEAVTDAWNL 402
>gi|307107250|gb|EFN55493.1| hypothetical protein CHLNCDRAFT_9137, partial [Chlorella
variabilis]
Length = 373
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 132/389 (33%), Positives = 185/389 (47%), Gaps = 38/389 (9%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVV------VTLLLKNGATCIGK 125
PLAGL FA KD ++V GY TG G+P W RDH A+ TA + LL GA GK
Sbjct: 2 PLAGLAFAAKDSYNVAGYATGLGNPSWARDHPPAKTTAPARKSPRCLQALLDAGANLAGK 61
Query: 126 TVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
+ E A+ +G+N HYGTP N P H+PGGSSSG A VA+ V FALG DT G VRV
Sbjct: 62 AAMSELAYDFSGQNYHYGTPPNTAAPCHMPGGSSSGCAALVASGEVAFALGGDTAGSVRV 121
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRA 245
PASFCG+ RPSHG VS+ G +P + S DT G AR+A +L VG LL +A P
Sbjct: 122 PASFCGVFSCRPSHGRVSLEGSVPLAPSFDTAGWFARDAELLSAVGKTLLAGSAPGP--- 178
Query: 246 RRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQS 305
A D + L T ++ L+G + + ++ L Q
Sbjct: 179 -----AVDSWN------LVTATTPARVACLLAGACGESELCLFPHL------LAAATYQC 221
Query: 306 TSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKS-AKPRLGYNVFERVLEAINTTQDNI 364
P + L+LQ E + WV KP + + +R+ A ++
Sbjct: 222 CWPL----------PLPLALQSKEVNEVLGPWVSGPTKPAVSAGIAQRLKAASLVSKQAA 271
Query: 365 KILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMS 424
+ + + L LL +L++PT P L + + R + L+SI S++
Sbjct: 272 AAARQQADAITTRLDSLLGTSSVLLLPTTPFPAPPLGSDLEAQPDNVGRLMALTSIASLA 331
Query: 425 GCCQVAIPIGKYNEH-PISISFITYHGGD 452
G QV++P+ + P+ +S I G D
Sbjct: 332 GLPQVSMPLATLEDGLPVGVSIIGPRGSD 360
>gi|239834477|ref|ZP_04682805.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Ochrobactrum
intermedium LMG 3301]
gi|444310065|ref|ZP_21145692.1| amidase [Ochrobactrum intermedium M86]
gi|239822540|gb|EEQ94109.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Ochrobactrum
intermedium LMG 3301]
gi|443486517|gb|ELT49292.1| amidase [Ochrobactrum intermedium M86]
Length = 395
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 134/395 (33%), Positives = 200/395 (50%), Gaps = 27/395 (6%)
Query: 63 QPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATC 122
+PP A PL G + A+KD++DV G VTG G+P + + AER+A VV LL GA
Sbjct: 16 KPPVHALEGPLEGERLAVKDIYDVAGMVTGCGNPQIEAESPRAERSAPVVERLLAAGAEF 75
Query: 123 IGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGC 182
+GK DE AF + G+N H+ P+NP P + GGSSSGSA AVA +L D ALG+DT G
Sbjct: 76 VGKAQTDELAFSLMGQNSHFPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGS 135
Query: 183 VRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
+R PASFCG++G R +HG + + G++P + SLDT+G AR+ + RVG +LL +A E
Sbjct: 136 IRAPASFCGLVGLRSTHGRIPLQGIMPLAPSLDTIGWFARDIELYDRVGAILLGDDARE- 194
Query: 243 RRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLR 302
F L+K+ + + + Y+ A P GL+
Sbjct: 195 ------------FNLTKLLYMPVLEQLLLGEAETDAYR--------AMFAEVRPHFTGLK 234
Query: 303 AQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQD 362
A S T ++ L V +Q E + W+ S +LG V +R D
Sbjct: 235 AASQP----TLSIDELYLVFRHIQGAEAWATHGGWISSGDRKLGPGVADRFAFGAEIAAD 290
Query: 363 NIKILYKVRNEMRAALQRLLKDDKILVIPTV-SDPPLKLNTKKTYSAEFHDRTLVLSSIG 421
+ R + L++++ +D +L +PTV PL +T A + ++ L L +
Sbjct: 291 LVASQRLRRAQFTQELEKIIGNDAVLALPTVPGAAPLAKEPFETLQA-YREQALRLLCLS 349
Query: 422 SMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+SG Q+ +P+G+ P ISFI G D+ L+
Sbjct: 350 VLSGLPQITLPLGQVQSAPFGISFIGPRGSDRALI 384
>gi|402850118|ref|ZP_10898330.1| hypothetical protein A33M_3273 [Rhodovulum sp. PH10]
gi|402499607|gb|EJW11307.1| hypothetical protein A33M_3273 [Rhodovulum sp. PH10]
Length = 399
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 136/401 (33%), Positives = 194/401 (48%), Gaps = 38/401 (9%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
A+ PLAGL A+KD++DV G TG GSP W H AER A +V LL GAT +GKTV
Sbjct: 21 ASTGPLAGLTAAVKDMYDVAGTRTGGGSPAWLAAHPPAERNAGLVEKLLGAGATIVGKTV 80
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
DEF + + G N HYGTPVNP+ P IPGGSSSGSA A A+ + D ALG+DT G VR+PA
Sbjct: 81 CDEFFYSVAGTNAHYGTPVNPRAPGRIPGGSSSGSASAAASGVCDVALGSDTGGSVRIPA 140
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
+FCG+ G RP+ G + + G + + S D G +A + +VG VLL +A +
Sbjct: 141 AFCGLYGLRPTLGRMDLSGAMAMAPSFDVPGWMAAGPGVFAKVGDVLLSGSAAR-TPVDK 199
Query: 248 LIFADDIFQLSKVPKL-----KTIHVISKAIESLS-GYQNPEHMNVGQYIASNVPSLKGL 301
+I DD F + P++ +T+ + A+ +S G PE +V +
Sbjct: 200 VIVLDDAFAQAD-PEVAAFLEETLAAMGDALPKMSHGAIAPEGFDVWR------------ 246
Query: 302 RAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQ 361
+Q +E + +V+S P G V ER A T
Sbjct: 247 ------------------EAFRVVQAFEVWKTFGAFVESKNPAFGPGVRERFETAAKITA 288
Query: 362 DNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIG 421
+ V+ + + +L +PT + + Y F R + L+
Sbjct: 289 EEADAARVVKRNATEWIHGVAAPGTVLALPTAPCIAPRADEPADYMESFRVRVMRLTCTA 348
Query: 422 SMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDL 462
+SG QV IP G + PI +SFI + G D+ LL+ + L
Sbjct: 349 GISGLPQVTIPAGTISGCPIGLSFIGWPGADEILLELAVTL 389
>gi|218202689|gb|ACK75962.1| amidase family protein [Proteus mirabilis]
Length = 408
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 146/427 (34%), Positives = 221/427 (51%), Gaps = 49/427 (11%)
Query: 50 GAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTA 109
GAF+E F + P+ + L GL FA+KD D+ Y T +GSP W+ H A A
Sbjct: 8 GAFVETFTIEPY-------SNGSLNGLTFAVKDNIDIAQYKTSYGSPSWQHKHKAAIYNA 60
Query: 110 VVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQ 169
+ V LL GATC+GKTV DEF + + GEN +GTP+NP++P IPGGSSSGSA AVA
Sbjct: 61 LCVDQLLGAGATCLGKTVSDEFTYSLDGENFFFGTPINPKVPDRIPGGSSSGSASAVACG 120
Query: 170 LVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHR 229
LVDFA+GTD+ G +RVPAS CG+ RP+ +S GVLP S TVG A + +L
Sbjct: 121 LVDFAIGTDSAGSIRVPASLCGVYAMRPTMHRISEAGVLPFVPSTSTVGAFANDIDVLGD 180
Query: 230 VGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQ 289
V H LL+ +V ++ + +D F S + +I +I +L +N+
Sbjct: 181 VMHTLLKSESVVSQKIETIYLLEDAFNTSDA---EVSALIKDSINNL-------LVNIDA 230
Query: 290 YIASNVPSLKGLRAQSTSPENGTATLKALS-SVMLSLQRYEFKTIYEEWVKSAKPRLG-- 346
+ S +L + + ATL L+ + + LQ +EF W++ P L
Sbjct: 231 DVVS--ITLSDILGEE-------ATLDMLNVNALRPLQTFEFLNTVGNWIEHESPELSPF 281
Query: 347 ----YNV---FERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKIL--VIPTVSDPP 397
Y FER L D++++ + M + L+ K D +L +PTV+ P
Sbjct: 282 FAMKYETVRKFERKL-----VSDSLRLCERYFRRMSSFLK---KGDLVLFPTVPTVA--P 331
Query: 398 LKLNTKKTYSA-EFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
LK + + +A +F+DRT+ ++S + +++IPI + P+ +S D+FL+
Sbjct: 332 LKHSLEDMETALDFYDRTMSITSFSGIGRLPEISIPIANIDNAPVGLSVAAGFYQDEFLI 391
Query: 457 DTVLDLY 463
+V L+
Sbjct: 392 SSVKQLF 398
>gi|192360244|ref|YP_001981097.1| amidase [Cellvibrio japonicus Ueda107]
gi|190686409|gb|ACE84087.1| amidase [Cellvibrio japonicus Ueda107]
Length = 393
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/406 (32%), Positives = 197/406 (48%), Gaps = 36/406 (8%)
Query: 63 QPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATC 122
P P + R L+GL+ +KD+F + G T G+PDW R H +T+ VV LL GA
Sbjct: 16 HPSPSSTR--LSGLRLGVKDLFHIAGLPTAAGNPDWLRTHPVPRQTSPVVEALLAAGAQL 73
Query: 123 IGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGC 182
IGKT DE A+ + G N HYG P NP P +PGGSSSGSAVAVAAQ +D LGTDT G
Sbjct: 74 IGKTQTDELAYSLNGLNSHYGAPRNPVTPERLPGGSSSGSAVAVAAQEIDIGLGTDTGGS 133
Query: 183 VRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL----LQLN 238
+RVPAS+ G+LG R SHG + ++P + + DTVG L R+A L VG VL L ++
Sbjct: 134 IRVPASYNGLLGIRTSHGIIPSDHMVPLAPAFDTVGWLTRDAQTLQAVGEVLLPPSLSVS 193
Query: 239 AVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSL 298
A +P R L+ P++ + + A + Q++ S P L
Sbjct: 194 ARKPWRVSLLL-----------PEMNGAALWTSAHQ--------------QWLDSQ-PVL 227
Query: 299 KGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAIN 358
+ + A L S LQ YE + W++ +PR ++ R
Sbjct: 228 QVFKPLFVK----QAWLARASETFRVLQGYEIWCTHGVWIQQQQPRFAPDIQARFQWCSQ 283
Query: 359 TTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLS 418
TQD + ++R ++ ++ ++V+PT P L + + + + L+
Sbjct: 284 LTQDQQQQAEQMRVQLCREIEHWFDQVDLVVMPTTPGPAPLLGADAAWMDAYRRQLMGLT 343
Query: 419 SIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYD 464
S ++ Q+ +P+ + P+ +S + H DK LL +L +
Sbjct: 344 SPAGLARLPQIHLPVLQQQGAPVGVSLLGPHRSDKALLQVATELMN 389
>gi|374711333|ref|ZP_09715767.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Sporolactobacillus
inulinus CASD]
Length = 389
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 145/425 (34%), Positives = 212/425 (49%), Gaps = 39/425 (9%)
Query: 43 LNGRVDFGAFL-ERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRD 101
++G+ GAF+ + L P L G FA KDVF V+G+VT G P W
Sbjct: 1 MDGQESLGAFVTDGLNLAPL-------GNGVLNGTVFAAKDVFAVRGHVTSAGQPLWAST 53
Query: 102 HHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSG 161
H AE A VV LL+ GA G TV DE + + G+N HY +NP++P GGSSSG
Sbjct: 54 HPAAEAHAPVVKSLLECGARLRGMTVTDELMYSLKGDNIHYPPTINPRVPDAYSGGSSSG 113
Query: 162 SAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLA 221
SAVA A++ VDFA+GTDT G VR+P+S+CG+ G RPSHG VS+ GV+P + S DTVG +A
Sbjct: 114 SAVATASEAVDFAIGTDTGGSVRIPSSYCGLFGIRPSHGAVSLEGVVPLAPSFDTVGWMA 173
Query: 222 RNASILHRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQN 281
R+A +L RVG LL P +A +QL + +
Sbjct: 174 RSAELLERVGSCLL------PEKASASF--QRFYQLKEA------------------WAQ 207
Query: 282 PEHMNVGQYIASNVPS-LKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKS 340
+H +V Q + + + L L+ + T + A L+ LQ YE + W++
Sbjct: 208 IDHPSVLQSLRAFIKEHLSDLKIEPT--QLPLAKPAELAETFRVLQGYEAWQSHGLWIEQ 265
Query: 341 AKPRLGYNVFERVLEAINTTQDNI-KILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLK 399
P +V R A +D + + + ++ L D +L+IPT P K
Sbjct: 266 NHPHFARDVGGRFEAASKMKKDKAYQQAAATKQQFTEKIRAFLGSDGLLIIPTTYGPAPK 325
Query: 400 LNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTV 459
+ S + RT+ L+ I +SG QV +PI + PI +SFI+ +G D+ LL V
Sbjct: 326 RGSGAEESDKVRARTMQLTCIAGVSGLPQVTVPILELAA-PIGLSFISGYGTDRQLLAFV 384
Query: 460 LDLYD 464
++++
Sbjct: 385 RNVFE 389
>gi|323137392|ref|ZP_08072470.1| Amidase [Methylocystis sp. ATCC 49242]
gi|322397379|gb|EFX99902.1| Amidase [Methylocystis sp. ATCC 49242]
Length = 389
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 134/387 (34%), Positives = 191/387 (49%), Gaps = 33/387 (8%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G FA+K+ DV G V+ G P W H A A VV LL GA +GKT +DE
Sbjct: 21 PLTGATFAVKENIDVAGQVSTNGHPQWAATHAAAHANAPVVDRLLAAGARLVGKTHMDEM 80
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+ + G N H+GTP+NP + PGGSSSGSAVAVAA LV FALGTDT G R PA+FCG
Sbjct: 81 AYSLLGANPHFGTPINPAAQNRHPGGSSSGSAVAVAAGLVSFALGTDTAGSCRAPAAFCG 140
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
I G+R SHG + + GV+P + SLD +G AR+ + VG VLL ++ + R +
Sbjct: 141 IFGFRSSHGAIPIDGVIPLAPSLDVIGWFARDLDRMVDVGDVLLPADS-DDGEFREAVLL 199
Query: 252 DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLR-AQSTSPEN 310
D F +E+ ++ AS P++ L+ A
Sbjct: 200 SDAFH---------------GVET-------------EFAASAAPAIDQLKSAPWREGRL 231
Query: 311 GTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKV 370
K + +LQ +E T + W+ + P G V ER+ A T + +
Sbjct: 232 DDEFFKTALAHFRNLQAHEAWTSHGGWIAAHHPTFGKGVEERLAIASKVTLEQKRAAEAF 291
Query: 371 RNEMRAALQRLLKDDKILVIPTVS-DPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
E R + +L DD +V PT PL ++ + A+ + + + L I S G Q+
Sbjct: 292 GAEARKKVDAMLGDDGFIVSPTTPFRAPLLADSDEQLDAKRY-QMMRLFLIASYFGLPQI 350
Query: 430 AIPIGKYNEHPISISFITYHGGDKFLL 456
A+P+ ++ P+ +SFI G D+ LL
Sbjct: 351 ALPL-PSSDAPVGLSFIGRRGSDRKLL 376
>gi|395007398|ref|ZP_10391148.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Acidovorax sp. CF316]
gi|394314606|gb|EJE51487.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Acidovorax sp. CF316]
Length = 407
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 135/402 (33%), Positives = 188/402 (46%), Gaps = 28/402 (6%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA PLAGL+FA KDVFDV G TG G+P W H R + +V LL GAT GK V
Sbjct: 30 AAHGPLAGLRFAAKDVFDVAGQPTGAGNPAWLASHPVPARHSALVQQLLDVGATLCGKLV 89
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
DE A+ I G N HYG P+N P IPGGSSSGS AVAA+LVDFALGTDT G RVPA
Sbjct: 90 TDELAYSIHGHNLHYGMPLNSAAPERIPGGSSSGSVAAVAARLVDFALGTDTGGSTRVPA 149
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
S+CG+ G R +HG VS G++P +S DT A + + RV LL RA +
Sbjct: 150 SYCGVWGLRTTHGLVSRAGLVPLHESFDTATWFAHDPTTFERVAQALLPATPFAALRAVQ 209
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
L A L VG+ +A+ +P G + +
Sbjct: 210 LQDAAAEADAEVAALLP---------------------RVGEVLATLLPQGVG----TAT 244
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
G+A L+ ++ +E + W+ + P + R A T +
Sbjct: 245 AAQGSA-LEDWRRHYVAWGAHEAWQAHGAWISANAPGFEAAIAGRWQAASEVTAEAAGAA 303
Query: 368 YKVRNEMRAALQRLLKDDKILVIPTVSD-PPLKLNTKKTYSAEFHDRTLVLSSIGSMSGC 426
RA ++ L+ +LV+P+ + PL+ A RTL + I ++G
Sbjct: 304 RAAGLAARAQVRALVGSGTVLVLPSAASVAPLRSAEGAEIDA-IRARTLRICCIAGLAGL 362
Query: 427 CQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQE 468
QV++P+ P +S I G D L+ + ++ +LQ+
Sbjct: 363 PQVSLPLATAGGLPAGVSLIGPAGSDLALVRLAVRVWQALQD 404
>gi|126728595|ref|ZP_01744410.1| amidase [Sagittula stellata E-37]
gi|126710525|gb|EBA09576.1| amidase [Sagittula stellata E-37]
Length = 390
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 142/407 (34%), Positives = 189/407 (46%), Gaps = 38/407 (9%)
Query: 61 FPQPP---PPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLK 117
P PP A PLAGL +KD++DV GY TG G P + A V LL+
Sbjct: 12 MPYPPVRVASAGGGPLAGLTLGVKDIYDVAGYRTGSGCPTALAMSEVKQANAPAVDALLE 71
Query: 118 NGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGT 177
GA +GKT DE A+ + G N H+GTPVNP P IPGGSSSGSAVAVAA L D A+G+
Sbjct: 72 AGAAFVGKTHTDELAWSMYGMNAHFGTPVNPAAPDRIPGGSSSGSAVAVAAGLCDIAVGS 131
Query: 178 DTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQL 237
DT G VR PASFCGI G RP+HG +S+ V + S DT GL AR+ L R VL++
Sbjct: 132 DTGGSVRAPASFCGIWGIRPTHGVISLEAVQKLASSYDTCGLFARDGETLLRAMSVLMED 191
Query: 238 NAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPS 297
+A P R + D + QL PE V Y A+
Sbjct: 192 SAPLPDVPRLMRPLDMLAQL-----------------------GPEQRAV--YDAA---- 222
Query: 298 LKGLRAQSTS--PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLE 355
G+ A S PE AT K L+ + K +++S+ L + R
Sbjct: 223 FGGMEATEVSVYPEGVEATYK----TFLTTMSADAKVDVVPFIRSSSMPLVRGIDGRADA 278
Query: 356 AINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTL 415
A T ++ R AA+ RLL + +L+ P V D P +L+ F +
Sbjct: 279 AEALTDAEAEVGRTARAAFTAAMDRLLGAEGVLLAPVVHDAPFRLDAPVEVFDGFRHDAM 338
Query: 416 VLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDL 462
L + ++G QV +P K + P +S I G D L+ + L
Sbjct: 339 RLLCVAGLAGLPQVVMPARKVDGAPYGVSLIGPRGSDLSLIRAAMAL 385
>gi|398837197|ref|ZP_10594507.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. YR522]
gi|398209188|gb|EJM95869.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. YR522]
Length = 393
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 131/401 (32%), Positives = 202/401 (50%), Gaps = 28/401 (6%)
Query: 58 LIPFPQPPPPAARQ-PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLL 116
+P+P P ++ PLAGL+ A+KD+FDV GY TG G+P R+A V LL
Sbjct: 8 FVPYPDAPVASSPDGPLAGLRLAVKDIFDVAGYPTGCGNPHMLAMSGIKTRSAPAVQALL 67
Query: 117 KNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALG 176
GA +GK DE AF + G N H+GTP N P IPGGSSSGSA AV+ L D ALG
Sbjct: 68 DAGARFVGKVHTDELAFSMNGRNAHFGTPRNGAAPDRIPGGSSSGSAAAVSNDLADIALG 127
Query: 177 TDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLL- 235
TDT G VR PAS CG++G RP+HG +S+ V+P S + DT G AR+ + RVG VLL
Sbjct: 128 TDTGGSVRTPASHCGLIGLRPTHGRISLADVMPLSPTFDTCGWFARDPGVFARVGEVLLG 187
Query: 236 QLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNV 295
+ + V P R ++ AD + L+ P+++ + + +
Sbjct: 188 EDSVVLPENPRAMVAADVLALLA--PRVQAV------------------------FCATL 221
Query: 296 PSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLE 355
G+ + + + +AL +Q Y+ + E ++ +LG V ER
Sbjct: 222 DRFAGVLGTPQPVKTASVSFEALFWAFRFIQGYQAWQSHGEHIRRHDFQLGPGVAERFAW 281
Query: 356 AINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTL 415
+ T ++ VR R RLL D +L++PTV D +L + ++ ++ +
Sbjct: 282 SATVTPQQMQQHSAVRWSFRDDFARLLGADGVLLLPTVPDIAPRLIDPEPALEDYRNQAV 341
Query: 416 VLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+ + +SG Q+++P+ + ++ P +S I G D+ L+
Sbjct: 342 RMLCLAGLSGLPQISLPLMRLDDAPFGLSLIGPPGSDRSLV 382
>gi|407697710|ref|YP_006822498.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Alcanivorax
dieselolei B5]
gi|407255048|gb|AFT72155.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Alcanivorax
dieselolei B5]
Length = 389
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 133/386 (34%), Positives = 194/386 (50%), Gaps = 29/386 (7%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL GL FA+KDVFD+ G VTG G P W+ A T+ ++ LL GA +GKT DE
Sbjct: 22 PLQGLTFAVKDVFDIAGTVTGVGQPSWRASQPPARHTSPMIETLLAAGAELVGKTHTDEL 81
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
+ + G+N HYGTP NP +P +PGGSSSGSA VAA LVDFALG+DT G VRVPAS+CG
Sbjct: 82 TYSLAGQNAHYGTPPNPAVPGAVPGGSSSGSASVVAAALVDFALGSDTGGSVRVPASYCG 141
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
I G RP+HG V ++S DT+G AR+A ++ R+G +LL A + RRL+
Sbjct: 142 IHGLRPTHGVVDYRHCAHLAKSFDTLGWFARDARLMARIGRILLP--AGDRPAPRRLLLV 199
Query: 252 DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENG 311
++ S V+S+ +E+ G P G N
Sbjct: 200 EEALAQSDA------DVVSQ-LEARVGNGLPGVTFGGSISVGN----------------- 235
Query: 312 TATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVR 371
L + LQ YE + W+++ +P G V ER A + + +
Sbjct: 236 ---LDTYFNAFRPLQAYEAWARFGSWIETEQPVFGPGVKERFEAASRISAAEAEDAREQC 292
Query: 372 NEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAI 431
+R ++ LL +D +L +PT L L + + RTL ++++ +G Q+++
Sbjct: 293 QALRTRIRALLGEDTLLCLPTTPTSALPLQADEARVEDIRGRTLRMTALAGTTGLPQLSL 352
Query: 432 PIGKYNEHPISISFITYHGGDKFLLD 457
P+ + P+ +S I D+ LLD
Sbjct: 353 PLLHDRDGPVGLSLIGPASSDQQLLD 378
>gi|153011561|ref|YP_001372775.1| amidase [Ochrobactrum anthropi ATCC 49188]
gi|151563449|gb|ABS16946.1| Amidase [Ochrobactrum anthropi ATCC 49188]
Length = 395
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 134/386 (34%), Positives = 198/386 (51%), Gaps = 27/386 (6%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G + A+KD++DV G TG G+P + + AER+A VV LL GA +GK DE
Sbjct: 25 PLKGERLAVKDIYDVAGMATGCGNPQIEAESPRAERSAPVVEKLLAAGAEFVGKAQTDEL 84
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
AF + G+N H+ P+NP P + GGSSSGSA AVA +L D ALG+DT G +R PASFCG
Sbjct: 85 AFSLMGQNSHFPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGSIRAPASFCG 144
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
++G R +HG + + G++P + SLDT+G AR+ + RVG +LL +A E R
Sbjct: 145 LVGLRTTHGRIPLEGIMPLAPSLDTIGWFARDIDLYDRVGSILLGNDAREFR-------- 196
Query: 252 DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENG 311
+ QL +P L+ + L G Q + A P GL+A S
Sbjct: 197 --LTQLLYMPVLEQL---------LLGQQETDAYRT--MFAQVRPHFSGLKAASQP---- 239
Query: 312 TATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVR 371
T ++ L V +Q E + W+ S +LG V +R D + R
Sbjct: 240 TLSIDELYLVFRHIQGAEAWATHGGWISSGDRKLGPGVADRFAFGAEIAADLVASQRMRR 299
Query: 372 NEMRAALQRLLKDDKILVIPTV-SDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVA 430
+ L++++ +D +L +PTV PL +T A + ++ L L + +SG Q+
Sbjct: 300 AQFTQELEQIVGNDAVLALPTVPGAAPLAKEPFETLQA-YREQALRLLCLSVLSGLPQIT 358
Query: 431 IPIGKYNEHPISISFITYHGGDKFLL 456
+P+G+ P ISFI G D+ L+
Sbjct: 359 LPLGQVQGAPFGISFIGPRGSDRALI 384
>gi|359396853|ref|ZP_09189904.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Halomonas
boliviensis LC1]
gi|357969531|gb|EHJ91979.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Halomonas
boliviensis LC1]
Length = 416
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 148/435 (34%), Positives = 217/435 (49%), Gaps = 43/435 (9%)
Query: 51 AFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAV 110
AF+E FE+ P+ A L GL FA+KD D++ T +GS W+ H A AV
Sbjct: 11 AFVELFEIAPY-------ASGTLDGLCFAVKDNIDIRDRFTSYGSKPWREAHPRAAYNAV 63
Query: 111 VVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQL 170
V LL GA C+GKT+ DEF + + GE+ YGTPVNP+ P IPGGSSSGSA AVA L
Sbjct: 64 CVEQLLMAGARCVGKTIADEFTYSLDGESYFYGTPVNPRAPDRIPGGSSSGSASAVACGL 123
Query: 171 VDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRV 230
VDFALGTD G +R+PAS CG+ G RPS +S GVLP + S+ TVG+LA+N IL +
Sbjct: 124 VDFALGTDCGGSIRIPASLCGVFGMRPSLHRISEAGVLPFAPSVSTVGVLAQNLPILRQT 183
Query: 231 GHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQY 290
VLL+ + V + + + F L+ P ++ + +S+ I L + N +V
Sbjct: 184 MRVLLRSHDVAVPPVKNIYLVKEAFALAD-PAIQ--NALSECITHLGNFPNVTVASV--- 237
Query: 291 IASNVPSLKGLRAQSTSPENGTATLKALSSVMLS-LQRYEFKTIYEEWVKSAKPRLGYNV 349
SL+ + S LK+ + L LQ E W++ +P G N
Sbjct: 238 ------SLRDITGLDVS-------LKSCNEDALRILQTAEVANAIGGWIQENRPEQGPN- 283
Query: 350 FERVLEAINTTQDNIKILYKVRNEMRAALQRL---LKDDKILVIPTVSDPPLKLNTKKTY 406
F+ N Q + + N A R+ + I PT P+ K T
Sbjct: 284 FQAGYR--NVEQFDRSTMSDALNLCEALFSRVAAFTQPGDIFCYPTA---PVLAPKKGTL 338
Query: 407 SA-------EFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTV 459
+ +++DRT+ ++S ++ ++ IP+ + N P+ +S H D+FLLD
Sbjct: 339 TGSNLNSVLDYYDRTMAVTSFAGVARLPEITIPLAQVNGIPVGLSLTAGHYQDEFLLDAS 398
Query: 460 LDLYDSLQEQVNIAS 474
L L+ S +++ S
Sbjct: 399 LHLWGSQPVGLDLCS 413
>gi|410621287|ref|ZP_11332136.1| amidase [Glaciecola pallidula DSM 14239 = ACAM 615]
gi|410159291|dbj|GAC27510.1| amidase [Glaciecola pallidula DSM 14239 = ACAM 615]
Length = 403
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 190/417 (45%), Gaps = 41/417 (9%)
Query: 63 QPPPPAARQ----------PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVV 112
QPPP + + PL +K A+KD+FD+KG T G+PDW R H T V
Sbjct: 14 QPPPYSDTKVKYAANCEIIPLQNMKLAVKDLFDIKGIPTAAGNPDWLRTHPLPSNTNSTV 73
Query: 113 TLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVD 172
L+K+GA GKT+ DE A+ + G+N HY T +NP P +PGGSSSGSAVAVAA+L D
Sbjct: 74 ASLIKHGAAYEGKTLTDELAYSLNGQNIHYPTLINPVNPERLPGGSSSGSAVAVAAELAD 133
Query: 173 FALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGH 232
LGTDT G +RVPAS+ G+ G R SHG + ++ + S DT+G + RN L +V
Sbjct: 134 IGLGTDTGGSIRVPASYNGLFGLRTSHGLIPTDNMVSLAPSFDTIGWMCRNIDDLEKVAK 193
Query: 233 VLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISK---AIESLSGYQNPEHMNVGQ 289
VLL P+ + T H K A +S + +H
Sbjct: 194 VLL------PKESAN----------------ATTHETVKFCIATNLISCSEQADH----- 226
Query: 290 YIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNV 349
I V LK A EN + +S +LQ +E + EW+ P ++
Sbjct: 227 -IEKMVEGLKSATALKLVQENINTSTYKISDTFRTLQGFEIWQQHGEWITRTHPTFADDI 285
Query: 350 FERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAE 409
+R T + I + + + L+ ++++PT L+T E
Sbjct: 286 QQRFDWCKTITLQDYNIAKQQQQSFTKYINSRLQKHDVILLPTTPGRAPLLSTAANQLGE 345
Query: 410 FHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSL 466
+ + + ++I ++G Q+ +P+ N P IS I D L++ L L
Sbjct: 346 YRNNLIKFTAIAGLAGLPQIHLPLFTINNAPCGISLIAPKNQDLRLINIAKKLMKHL 402
>gi|303280153|ref|XP_003059369.1| chloroplast envelope protein translocase family [Micromonas pusilla
CCMP1545]
gi|226459205|gb|EEH56501.1| chloroplast envelope protein translocase family [Micromonas pusilla
CCMP1545]
Length = 432
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 141/411 (34%), Positives = 189/411 (45%), Gaps = 51/411 (12%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDW--KRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
L+GL FA+KD D+ G+ TG G+PDW R A A V +L GATC+GKT +DE
Sbjct: 55 LSGLTFAVKDNLDLAGHRTGCGNPDWLRTRGGTPAATHAPCVAAMLDAGATCVGKTQMDE 114
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
A+ + GEN HYGTP NP PS +PGGSSSGSA AVAA VD ALGTDT G VRVPAS+
Sbjct: 115 LAWSLQGENAHYGTPSNPADPSRVPGGSSSGSACAVAAAHVDVALGTDTAGSVRVPASYV 174
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLN----AVEPRRAR 246
G+ G+RPSHG V + G + ++S D VG AR+A+ L G LL + + +
Sbjct: 175 GVYGFRPSHGRVPVDGCVALARSFDCVGWFARDAATLMACGAALLPPDRPSGTIHADGFK 234
Query: 247 RLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQST 306
RLI A D F T + AIE +
Sbjct: 235 RLIVATDAFATCDA---GTREALISAIERAA----------------------------- 262
Query: 307 SPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKI 366
+ G A +LQ E + W++ P G V ER A
Sbjct: 263 --KAGGDLEPAWWDSFRTLQTREVWLEHGAWIEETDPSFGPGVAERFAAAEAGGGAATDA 320
Query: 367 LYKVRNEMRAALQRL---LKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSM 423
+ A +RL L+ ++V+P+ P LK + F R L L++ M
Sbjct: 321 IAAANAARDAITRRLNAMLEGGGVIVLPSAPSPALKTGASAEATEAFRARQLRLTTAAGM 380
Query: 424 SGCCQ--------VAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSL 466
+G Q V+IP + P+ +SFI G D+ LL + L +L
Sbjct: 381 AGLPQARRFGRRIVSIPAATADGAPVGLSFIAARGRDEELLALTVSLERAL 431
>gi|404329658|ref|ZP_10970106.1| Amidase [Sporolactobacillus vineae DSM 21990 = SL153]
Length = 412
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 146/416 (35%), Positives = 209/416 (50%), Gaps = 38/416 (9%)
Query: 49 FGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERT 108
FGAF++ I P + L L FA KDVF V G+ G+PDW++ H A R
Sbjct: 23 FGAFIQDQLFIK------PKSSGMLDHLIFAAKDVFAVSGHRNSAGNPDWEKTHRPAVRN 76
Query: 109 AVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAA 168
A V+ LL++GAT G TV DE + + G+N HY +NP++P GGSSSGSAVAVA
Sbjct: 77 AQVIDRLLRSGATLRGMTVTDELMYSLRGDNIHYPPTINPRLPDAFSGGSSSGSAVAVAG 136
Query: 169 QLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILH 228
L DFA+GTDT G VR+P+S+CG+ G RPSHG+VS+ GV+P + S DTVG +A ++ +L
Sbjct: 137 GLADFAIGTDTGGSVRIPSSYCGLFGMRPSHGSVSLDGVIPLAPSFDTVGWMAGSSGLLQ 196
Query: 229 RVGHVLLQLNAVEPRRARRLIF-ADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNV 287
+G LL + R L+ A D+ S V V+++A V
Sbjct: 197 EIGQCLLPEQEIGTFRHFYLLREAWDLVASSTVGT-----VLNEA--------------V 237
Query: 288 GQYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGY 347
+Y S L+ +SPE LS LQ E + W++ PR G
Sbjct: 238 FRYFPSG---LEVCTLPYSSPE-------LLSETFRILQGREAWQSHGAWIEKNHPRFGS 287
Query: 348 NVFERVLEAINTTQDNI-KILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTY 406
++ R A QD++ + +V+ A+ RLL D ++V+PT P
Sbjct: 288 DIAGRFEAASQMKQDDVWRHAAEVKRHFAEAMSRLLGQDGLIVLPTTFGPAPARTDSAAA 347
Query: 407 SAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDL 462
+T+ L+ I ++G Q+ IP P+ +SFI+ G D+ LL V DL
Sbjct: 348 GGRVRAQTMKLTCIAGVAGLPQITIPFADQGR-PVGLSFISGAGTDRQLLAFVHDL 402
>gi|404319786|ref|ZP_10967719.1| amidase [Ochrobactrum anthropi CTS-325]
Length = 395
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 133/386 (34%), Positives = 197/386 (51%), Gaps = 27/386 (6%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G + A+KD++DV G TG G+P + + AER+A VV LL GA +GK DE
Sbjct: 25 PLKGERLAVKDIYDVAGMATGCGNPQIEAESPRAERSAPVVKKLLAAGAEFVGKAQTDEL 84
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
AF + G+N H+ P+NP P + GGSSSGSA AVA +L D ALG+DT G +R PASFCG
Sbjct: 85 AFSLMGQNSHFPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGSIRAPASFCG 144
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
++G R +HG + + ++P + SLDT+G AR+ + RVG +LL +A E R
Sbjct: 145 LVGLRTTHGRIPLEDIMPLAPSLDTIGWFARDIDLYDRVGSILLGNDAREFR-------- 196
Query: 252 DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENG 311
+ QL +P L+ + L G Q + A P GL+A S
Sbjct: 197 --LTQLLYMPVLEQL---------LLGQQETDAYRT--MFAQVRPHFSGLKAASQP---- 239
Query: 312 TATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVR 371
T ++ L V +Q E + W+ S +LG V +R D + R
Sbjct: 240 TLSIDELYLVFRHIQGAEAWATHGSWISSGDRKLGPGVADRFAFGAEIAADLVASQRMRR 299
Query: 372 NEMRAALQRLLKDDKILVIPTV-SDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVA 430
+ L++++ +D +L +PTV PL +T A + ++ L L + +SG Q+
Sbjct: 300 AQFTQELEQIVGNDAVLALPTVPGAAPLAKEPFETLQA-YREQALRLLCLSVLSGLPQIT 358
Query: 431 IPIGKYNEHPISISFITYHGGDKFLL 456
+P+G+ P ISFI G D+ L+
Sbjct: 359 LPLGQVQGAPFGISFIGPRGSDRALI 384
>gi|388568366|ref|ZP_10154785.1| amidase [Hydrogenophaga sp. PBC]
gi|388264411|gb|EIK89982.1| amidase [Hydrogenophaga sp. PBC]
Length = 393
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 127/381 (33%), Positives = 173/381 (45%), Gaps = 29/381 (7%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L GL+ A+KD+ DV G TG G+PDW H + A V +L GA IGKT+ DE A
Sbjct: 26 LDGLRLAVKDLIDVAGAPTGGGNPDWADSHPVPDADAACVAMLRAAGARVIGKTITDELA 85
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
F + GEN +GTP +P P +PGGSSSGSA AVA D ALGTDT G VRVPASFCG+
Sbjct: 86 FSLEGENAFFGTPRHPLQPDRLPGGSSSGSAAAVAWGEADIALGTDTGGSVRVPASFCGV 145
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
RPSHG V + GVLP + DTVG AR+ + LH VG VL A P R+
Sbjct: 146 AAMRPSHGRVPLAGVLPFAPGFDTVGWFARDVNTLHAVGQVLFG-GACGP---ARVPLRP 201
Query: 253 DIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGT 312
I + + A +G P G +
Sbjct: 202 CIALDALALADADVQQALLAWSRQAGIDAPREAFAGAW---------------------- 239
Query: 313 ATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRN 372
+A +LQ + + W++ +PR+G ++ R +A+ D R+
Sbjct: 240 ---QAWGDAYAALQGLDIREQLGPWIRQRRPRMGESIAPRFGQALALDPDTRPRWQAWRD 296
Query: 373 EMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIP 432
E AL L D+ ++P L + F+ R L L S+ + Q+ +P
Sbjct: 297 EAARALVNRLGPDEAWLVPAAPCVALHRFAGSGERSNFYARALALGSLAGHAALPQIVLP 356
Query: 433 IGKYNEHPISISFITYHGGDK 453
P+ +SFI G D+
Sbjct: 357 FAAARGLPVGVSFIAAPGQDE 377
>gi|312198777|ref|YP_004018838.1| amidase [Frankia sp. EuI1c]
gi|311230113|gb|ADP82968.1| Amidase [Frankia sp. EuI1c]
Length = 574
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 132/383 (34%), Positives = 184/383 (48%), Gaps = 28/383 (7%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL GL A+KD+F V+G+ TG G+P W + R A V LL GA G DE
Sbjct: 195 PLRGLTVAVKDLFAVQGHRTGAGNPTWLAEAAPEPRHAPAVAALLAAGADVAGIAQTDEL 254
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+ ++G N HYGTP NP P +PGGS+SG A AVA LVD LGTDT G VRVPAS+CG
Sbjct: 255 AYSLSGTNVHYGTPPNPTAPGVVPGGSTSGPASAVALGLVDVGLGTDTGGSVRVPASYCG 314
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLN--AVEPRRARRLI 249
+ G RP+HG VS GV+P + S DTVG L R+A L +VG VLL + A P RL+
Sbjct: 315 LFGIRPTHGAVSAAGVVPLAPSFDTVGWLTRDADTLAQVGAVLLPADPAAGAP---TRLL 371
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
ADD+ ++ P++ + + H VP + G R
Sbjct: 372 VADDLVAAAE-PEVGAALAAVLPALAAAVGLPTRH----------VPRVAGGR------- 413
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
L + Q +E + WV + LG V R A T+ ++ +
Sbjct: 414 -----LDDWVTAFRQNQGWEANATHGAWVAAHPGTLGPGVAARFAAAAAVTEGQLRTAQR 468
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
VR ++R L L +LV P S P +++ TL L+S ++G V
Sbjct: 469 VRTQVRDILGAALAGGTVLVAPASSSPAPRMDLAVDVKDRVRAATLTLTSGAGLAGLPVV 528
Query: 430 AIPIGKYNEHPISISFITYHGGD 452
+P+ + + P+ ++ I G D
Sbjct: 529 VLPMLRVRDRPVGVALIGAAGTD 551
>gi|383756560|ref|YP_005435545.1| putative amidase family protein [Rubrivivax gelatinosus IL144]
gi|381377229|dbj|BAL94046.1| putative amidase family protein [Rubrivivax gelatinosus IL144]
Length = 403
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 138/418 (33%), Positives = 204/418 (48%), Gaps = 31/418 (7%)
Query: 51 AFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAV 110
AF+E FE+ PP L GL FA+KD D++ T +GS W+ H A AV
Sbjct: 11 AFVELFEI-------PPYRSGALEGLSFAVKDNIDIRDRSTSYGSKPWRETHPPAAHHAV 63
Query: 111 VVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQL 170
V LL GA C+GKTV DE + + GEN YGTPVNP+ P IPGGSSSGSA AVA L
Sbjct: 64 CVEQLLMAGARCVGKTVADELTYSLDGENHFYGTPVNPRAPDRIPGGSSSGSASAVACGL 123
Query: 171 VDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRV 230
VDFALGTD G +RVPAS CG+ G RPS +S GVLP + S+ TVG+LAR +L +
Sbjct: 124 VDFALGTDCGGSIRVPASLCGVYGMRPSLHRISEAGVLPFAPSVSTVGVLARTLPVLRQA 183
Query: 231 GHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQY 290
VLL+ A R + D F+++ P ++ +S + S G H+ V
Sbjct: 184 MRVLLRSQAQALPPVRNIYLLQDAFEIAD-PAIR--DALSGCVASFDGL---PHVTVKSI 237
Query: 291 IASNVPSLK-GLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNV 349
+ L LR+ + + LQ E W+++++P G N
Sbjct: 238 SLREITGLDLSLRSYN-------------EDALRVLQTAEIANALGGWIRASQPEQGPNF 284
Query: 350 FERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVS--DPPLKLNTKKTYS 407
+ + + + + A + + + PTV P + T +
Sbjct: 285 RAGYRNVESFDRSAMSDALNLCEALFARVAAFTRPGDVFCYPTVPVLAPKKGVLTGRNLD 344
Query: 408 A--EFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLY 463
A +++DRT+ ++S ++ ++ +P+ + + P+ +S H D+FLLD L L+
Sbjct: 345 AVLDYYDRTMAVTSFAGVARLPEITVPLAQVDGLPVGLSLAAGHYQDEFLLDASLRLW 402
>gi|390571058|ref|ZP_10251314.1| amidase [Burkholderia terrae BS001]
gi|389937214|gb|EIM99086.1| amidase [Burkholderia terrae BS001]
Length = 383
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 141/401 (35%), Positives = 196/401 (48%), Gaps = 37/401 (9%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
AR L GL+FA+KD+ DV G TG G+PDW H A R A V LL GA+ GKT+
Sbjct: 16 ARGALDGLRFAVKDLIDVAGTTTGGGNPDWLATHSPAARHAPCVARLLDAGASVDGKTIT 75
Query: 129 DEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPAS 188
DE A+ + G N HYGTP+NP+ P +PGGSSSGSA AVA+ VDFALGTDT G VRVPA+
Sbjct: 76 DELAYSLEGVNAHYGTPLNPRWPFALPGGSSSGSASAVASGEVDFALGTDTGGSVRVPAA 135
Query: 189 FCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRL 248
FCG+ G RP+H VS+ GVLP + DTVG A ++L RV VLL
Sbjct: 136 FCGLWGIRPTHDAVSLEGVLPFAPCFDTVGWFAPTGAMLARVADVLL------------- 182
Query: 249 IFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSP 308
DD VP + + + E+ E + L+ L A
Sbjct: 183 ---DD------VPAVDAPSALVRCKEAFDARATNE--------PGDAQRLRELFATQHEI 225
Query: 309 ENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILY 368
E V LQ W+ + KP G ++ R A D ++
Sbjct: 226 EVIADDRARWLHVYQQLQDDAIGASLGAWIDATKPHFGADIAARF--ARLKMHDAAEV-- 281
Query: 369 KVRNEMRAAL-QRL--LKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSG 425
+ + MRAA QR+ + D ++V+PT L + + F+ L +++I + G
Sbjct: 282 ERCHVMRAAFAQRIDGIVGDTLIVLPTTPRSLLSKHETPERTDAFYRDALTMNAIAAFGG 341
Query: 426 CCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSL 466
QV +P+ +E P+++S I G D+ L+ L+ +L
Sbjct: 342 LPQVTVPVANESERPLALSIIGPRGSDRALIARARQLFPTL 382
>gi|424883497|ref|ZP_18307125.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WU95]
gi|392515158|gb|EIW39891.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WU95]
Length = 410
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 140/392 (35%), Positives = 197/392 (50%), Gaps = 37/392 (9%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
A+ LAGL FA+KD+ D+ G TG G+PDW+ A A VVT LL NGAT +GKTV
Sbjct: 45 AQGSLAGLTFAVKDLIDIAGRRTGGGNPDWRAAATPAAAHAPVVTRLLANGATFLGKTVT 104
Query: 129 DEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPAS 188
DE AF + G N HYG P NPQ P +PGGSSSGSA AV A+LVDFALGTDT G VRVPA+
Sbjct: 105 DELAFSLEGRNIHYGIPRNPQNPDWLPGGSSSGSAAAVGARLVDFALGTDTGGSVRVPAA 164
Query: 189 FCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRL 248
F GI G RPSH V + GVLP + S DT+G AR+A L RVG VLL
Sbjct: 165 FSGIWGMRPSHYAVPLDGVLPFAPSYDTIGWFARDAQTLARVGDVLL------------- 211
Query: 249 IFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSP 308
++ TI ++ ++ L + + +A+ P ++ P
Sbjct: 212 -------PPAQHVDCLTISIVEDTLDMLDPTDAHAFRDAARRLANAAP----MQVFEHWP 260
Query: 309 ENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILY 368
+A L+ S ++Q YE + + KPR ++ ER A + + +
Sbjct: 261 ---SAQLQWAYS---TIQGYEIARSLGSRLDALKPRFAMDIGERFASASAVSYADYETAA 314
Query: 369 KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQ 428
VR LQ L + ++P S P L+++ F+ TL L+++ +G Q
Sbjct: 315 AVRQSFAGWLQDRLPPGTVALLPVTSAPHLRIDAPSEEIGRFYASTLALTALAGHAGAPQ 374
Query: 429 VAIPIGKYNEHPISISFITYHGGDKFLLDTVL 460
+ + P+S+ + G D+ +L+ L
Sbjct: 375 L-----QCGSSPLSV--MGRCGSDRAILNFAL 399
>gi|389693422|ref|ZP_10181516.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Microvirga sp. WSM3557]
gi|388586808|gb|EIM27101.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Microvirga sp. WSM3557]
Length = 397
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 139/400 (34%), Positives = 196/400 (49%), Gaps = 26/400 (6%)
Query: 58 LIPFPQPP-PPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLL 116
+P+P P P A PL+GL FA KD+FDV GY T GSP RTA V LL
Sbjct: 11 FMPYPAVPVPHAPSGPLSGLTFAAKDLFDVAGYPTSAGSPHMLAMSGIKSRTAPTVQKLL 70
Query: 117 KNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALG 176
GA +GKT+ DE AF ++G+N H+GTPVN P IPGGSSSGSA AV+ DFALG
Sbjct: 71 DAGARLVGKTITDELAFSMSGKNAHFGTPVNGGAPDRIPGGSSSGSAAAVSNGSCDFALG 130
Query: 177 TDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ 236
TDT G VR PAS CG+ G RP+HG VS+ G + S DT G R+ + RVG VLL
Sbjct: 131 TDTGGSVRAPASHCGLFGIRPTHGRVSLEGCHDLAPSFDTCGYFTRDGATFVRVGEVLLG 190
Query: 237 LNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVP 296
++ ++ R++ A D F L K + ++L+ +GQ + ++V
Sbjct: 191 PDSAPLPQSPRVLLAQDAFGLLK----------REVRDALAPALRRAEAALGQPVPADV- 239
Query: 297 SLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEA 356
+PE T AL M +Q E + ++ P LG V +R +
Sbjct: 240 ----------APEGFT----ALYWAMRYIQSREAWNVDGPMIERYHPPLGPGVADRFEFS 285
Query: 357 INTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLV 416
T + +R R LL D +L++P++ D L ++ + L
Sbjct: 286 KAVTDAQVAEAQVIRAAFRKRFSALLADGAVLILPSMPDIAPLLAESDASLNDYRNNALN 345
Query: 417 LSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
L + +SG QV+IP+ + P+ +S + G D L+
Sbjct: 346 LLCLSVLSGLPQVSIPLASRSGAPLGLSIMGPAGSDLSLV 385
>gi|420253617|ref|ZP_14756664.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. BT03]
gi|398051850|gb|EJL44161.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. BT03]
Length = 383
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 137/405 (33%), Positives = 195/405 (48%), Gaps = 45/405 (11%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
AR L GL+FA+KD+ DV G TG G+PDW H A R A V LL GA+ GKT+
Sbjct: 16 ARGALDGLRFAVKDLIDVAGTTTGGGNPDWLATHSPAARHAPCVAKLLDAGASVDGKTIT 75
Query: 129 DEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPAS 188
DE A+ + G N HYGTP+NP+ P +PGGSSSGSA AVA+ VDFALGTDT G VRVPA+
Sbjct: 76 DELAYSLEGVNAHYGTPLNPRWPFALPGGSSSGSASAVASGEVDFALGTDTGGSVRVPAA 135
Query: 189 FCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRL 248
FCG+ G RP+H VS+ GVLP + DTVG +L RV VLL
Sbjct: 136 FCGLWGIRPTHNAVSLEGVLPFAPCFDTVGWFTATGEMLARVADVLLD------------ 183
Query: 249 IFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPE---HMNVGQYIASN--VPSLKGLRA 303
VP + + + E+ E +G+ A++ + + RA
Sbjct: 184 ----------GVPAVDAPSALVRCKEAFDARATNEPGDAQRLGELFATHDEIEVIADDRA 233
Query: 304 QSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDN 363
+ V LQ W+ + KP G ++ R A T D
Sbjct: 234 R-------------WLHVYQQLQDDAIGASLGAWIDATKPHFGADIAARF--ARLKTHDA 278
Query: 364 IKILYKVRNEMRAALQRL--LKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIG 421
++ + R A QR+ + D ++V+PT L + + F+ L +++I
Sbjct: 279 AEV-ERCRVMRDAFAQRIDGIVGDALIVLPTAPRSLLSKHETPERTDAFYRDALTMNAIA 337
Query: 422 SMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSL 466
+ G QV +P+ +E P+++S I G D+ L+ L+ +L
Sbjct: 338 AFGGLPQVTVPVANESERPLALSIIGPRGSDRALIARARQLFPTL 382
>gi|332528853|ref|ZP_08404827.1| amidase [Hylemonella gracilis ATCC 19624]
gi|332041712|gb|EGI78064.1| amidase [Hylemonella gracilis ATCC 19624]
Length = 395
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 138/402 (34%), Positives = 201/402 (50%), Gaps = 30/402 (7%)
Query: 58 LIPFPQPP-PPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLL 116
+P+P P A+ PLAGL F +KD+FDV GY TG G+P RTA V LL
Sbjct: 10 FVPYPDVPVAHASTGPLAGLSFGVKDLFDVAGYPTGGGNPIVLALSGLKTRTAPTVQKLL 69
Query: 117 KNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALG 176
GA GKTV DE AF + G N H+G P+N P I GGSSSGSA AV+++L DFALG
Sbjct: 70 DAGARFAGKTVTDELAFSMNGNNAHFGAPINGAAPDRITGGSSSGSASAVSSRLCDFALG 129
Query: 177 TDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ 236
TDT G VR PA+ CG+ G RP+HG VS+ G L + S DT G AR+ RV VLL
Sbjct: 130 TDTGGSVRAPANHCGLYGIRPTHGRVSLEGALDLAPSQDTCGWFARDVMTFARVADVLLD 189
Query: 237 LNAVEPRRAR-RLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNV 295
+ +P AR RL+ D++ L + + +E+L G +P H + +
Sbjct: 190 TDP-QPLPARVRLLRPTDVWALLVPEVTAALSPAVQRVETLLGTCSPVHAVLDSF----- 243
Query: 296 PSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLE 355
A+ +Q E T ++ P LG V ER
Sbjct: 244 --------------------DAMYWSFRHIQGREAWTTDGPLIERYAPPLGPGVAERFAW 283
Query: 356 AINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSD-PPLKLNTKKTYSAEFHDRT 414
A T ++ R R L +LL +D +L++PT+ D PL+ +T ++ ++ +R
Sbjct: 284 AREVTDAQVQAATTFRTRFRQHLTQLLGNDAVLLMPTMPDIAPLR-STSESALEDYRNRA 342
Query: 415 LVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+ + I ++G Q+++P+ + P+ +S + G D+ L+
Sbjct: 343 IQMLCIAGLAGFPQLSMPLAQREGAPLGLSLLGPAGSDRALI 384
>gi|399020129|ref|ZP_10722269.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. CF444]
gi|398096139|gb|EJL86468.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. CF444]
Length = 400
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 136/415 (32%), Positives = 207/415 (49%), Gaps = 32/415 (7%)
Query: 58 LIPFPQPPPPA-ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLL 116
+P+P P A + PL+G++FA+KD+FDV G+ TG G+P +A V L
Sbjct: 11 FVPYPAPASTAISAGPLSGIRFAVKDIFDVAGFPTGCGNPHMLAMSGVKTASAPSVVALA 70
Query: 117 KNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALG 176
+ GA +GKT DE AF + G+N H+GTP N P IPGGSSSGSA AV+ L D ALG
Sbjct: 71 QAGARFVGKTYTDELAFSMNGKNAHFGTPRNGGAPDRIPGGSSSGSASAVSNGLADVALG 130
Query: 177 TDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ 236
TDT G VR PAS CG++G RP+H VS+ G + + S DT G AR+ RVG VLL+
Sbjct: 131 TDTGGSVRAPASHCGLIGLRPTHARVSLKGCMDLAPSFDTCGWFARDIDSFSRVGEVLLR 190
Query: 237 LNAV-----EPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYI 291
+ P + L+ AD + L P+++ + + + +E L+G I
Sbjct: 191 EDTCLLPDGAPSMPQVLVAADVLALLE--PRVQAVFM--QTLERLAG-----------VI 235
Query: 292 ASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFE 351
+ +P + T + +AL +Q YE + E + +LG V E
Sbjct: 236 GTPLPV-----------KTATPSFEALYWAFRYIQGYEAWQSHGETIVRHDLQLGPGVAE 284
Query: 352 RVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFH 411
R + T ++ VR+ R RLL D+++V+PT+ D L+ + +
Sbjct: 285 RFAWSSQITPQQMEEHSNVRDRFREDFLRLLGSDRVIVLPTMPDVAPLLSESEQVLENYR 344
Query: 412 DRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSL 466
++ + + + +SGC Q+++P+ + P S I G D+ L+ L D L
Sbjct: 345 NQAVRMLCLAGLSGCPQISLPLMTLDGAPFGFSIIGPLGSDQALIRLSRKLIDEL 399
>gi|145589367|ref|YP_001155964.1| amidase [Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|145047773|gb|ABP34400.1| Amidase [Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 392
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 132/388 (34%), Positives = 190/388 (48%), Gaps = 27/388 (6%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL L F +KD+FD+ T FGSP W H TA ++ L+ GA+ +GKT DE
Sbjct: 28 PLKDLTFGVKDIFDIANIPTAFGSPAWLNSHPIPTETATFISSLVDAGASLVGKTHTDEL 87
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
+ I G N HYGTP+N P+ +PGGSSSGSA AVAA LVDFA+G+DT G VR PASFCG
Sbjct: 88 TYSILGMNAHYGTPLNTVAPNRVPGGSSSGSASAVAANLVDFAIGSDTGGSVRAPASFCG 147
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
I G+RP+HG +S+ P ++S DT+G AR+ IL +VG VL N R A +
Sbjct: 148 IYGFRPTHGRISLERARPLAKSFDTLGWFARDPEILLKVGEVL--FNESRTRNA-----S 200
Query: 252 DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENG 311
F L + L + +A E++ SL+ R Q + E G
Sbjct: 201 ASYFFLKEAFDLLPPSLSKQAQEAI--------------------SLRLGRTQIPTVEIG 240
Query: 312 TATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVR 371
LK + +Q E + W +G V +R A + T+D R
Sbjct: 241 NCELKDWAETFRIIQAGEIWEQHGNWASEHLSEMGPGVKDRFEAARSITEDQKIKARSDR 300
Query: 372 NEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAI 431
++ A + +LL ++ L++PTV D +L++ +F + L I + G QV +
Sbjct: 301 EKVIAKMAQLLSENTYLILPTVFDIAPRLDSSAKEFDDFRKNSFQLLCIAGLCGLPQVTL 360
Query: 432 PIGKYNEHPISISFITYHGGDKFLLDTV 459
P+ + P +S + D LL +
Sbjct: 361 PLLTIQDAPFGVSILAKQNMDMSLLGEI 388
>gi|326793479|ref|YP_004311299.1| amidase [Marinomonas mediterranea MMB-1]
gi|326544243|gb|ADZ89463.1| Amidase [Marinomonas mediterranea MMB-1]
Length = 401
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/375 (31%), Positives = 183/375 (48%), Gaps = 31/375 (8%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G++ A+KD+F + G T G+P W H +TA V L NGA GKT+ DE
Sbjct: 34 PLTGMRLAVKDLFHIAGLPTSAGNPTWLATHETPSQTASSVQTLFDNGACFCGKTITDEL 93
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+ + G+N HYGTP NP P +PGGS+SGSAVAVA+ D LGTDT G +RVPAS+ G
Sbjct: 94 AYSLNGQNIHYGTPCNPTNPDRLPGGSTSGSAVAVASDFADIGLGTDTGGSIRVPASYNG 153
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
+ G RP+HG +++ G++P + S DTVG LA++ L + LL E ++++ A
Sbjct: 154 LFGLRPTHGVIAVDGLVPLAPSFDTVGWLAQDLDHLEATANALLASKHSE--TIQKILIA 211
Query: 252 DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENG 311
D++ Q + EH N I + + + ++ S E
Sbjct: 212 DNLIQ------------------------SVEHAN---QIQTQLDTWLNNSEKTESLEID 244
Query: 312 TATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVR 371
KA S +LQ E + EW+ P + ++ R + + D+ K R
Sbjct: 245 LDAWKA-SETFRTLQGAEILEQHGEWLAEHNPIIAPDIRMRFNWCKSISSDDQKHAAIQR 303
Query: 372 NEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAI 431
+ + LK IL+IPT L+T A++ + L++I ++G Q+ +
Sbjct: 304 DTFTRWIDSELKG-AILIIPTTPGRSPLLSTPDDELADYRIHLMNLTAIAGLAGLPQLHL 362
Query: 432 PIGKYNEHPISISFI 446
P+ + P +S I
Sbjct: 363 PVCNIDGAPCGLSLI 377
>gi|296534565|ref|ZP_06896979.1| amidase [Roseomonas cervicalis ATCC 49957]
gi|296265105|gb|EFH11316.1| amidase [Roseomonas cervicalis ATCC 49957]
Length = 399
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 137/385 (35%), Positives = 187/385 (48%), Gaps = 24/385 (6%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAGL+FA KD+FD+ G+ TG G+PDW R H +R A +V LL GA GKTV E
Sbjct: 28 PLAGLRFAAKDLFDIAGHPTGAGNPDWPRSHPVPQRHAWMVQRLLDAGADLAGKTVTCEI 87
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
+ G+ G N+ GTP NP P +PGGSSSGSA AVAA V+ LGTDT G VRVPAS CG
Sbjct: 88 SLGLLGFNQFDGTPPNPAAPGCLPGGSSSGSASAVAAGEVEIGLGTDTGGSVRVPASLCG 147
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
I G RP+HG + GV + S DT G R+A+ RV +LL P L+ A
Sbjct: 148 IYGLRPTHGRLPFEGVCQQAVSFDTTGWFTRDAATFARVAAILLDEPIPAP-GPTPLLLA 206
Query: 252 DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENG 311
+D F L++ + + A+E+L G Q ++ P
Sbjct: 207 EDAFALAEAEVREALQAPLAALENLLG-------GPAQRVSLGTPG-------------- 245
Query: 312 TATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVR 371
L S LQR E + W+++A PR +NV + A T+ + VR
Sbjct: 246 --ELAVWSGQRNILQRREGWRQFRPWIEAANPRFAFNVARNLAIASAFTEAQEVVAASVR 303
Query: 372 NEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAI 431
+RA LL+ +L IP+ L +R L+S M+G Q+++
Sbjct: 304 ERVRARAAALLEGGAVLCIPSTPFTAPPLGLPLPELDALTERISQLTSFAGMAGLPQLSL 363
Query: 432 PIGKYNEHPISISFITYHGGDKFLL 456
P+G+ P +S I G D L+
Sbjct: 364 PLGRAGGKPCGLSIIGARGSDARLV 388
>gi|91786295|ref|YP_547247.1| amidase [Polaromonas sp. JS666]
gi|91695520|gb|ABE42349.1| Amidase [Polaromonas sp. JS666]
Length = 394
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 138/402 (34%), Positives = 209/402 (51%), Gaps = 29/402 (7%)
Query: 58 LIPFPQPPPPAA-RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLL 116
+P+P P P+A PLA L+F +KD+FDV GY TG GSP RTA V LL
Sbjct: 10 FVPYPDVPVPSAFTGPLADLRFGVKDLFDVAGYPTGGGSPTVLALSGIKTRTAPTVQKLL 69
Query: 117 KNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALG 176
GA GKTV DE AF + G N H+G P+N I GGSSSGSA AV++ L DFALG
Sbjct: 70 DAGALFAGKTVTDELAFSMNGNNAHFGAPLNGAAHDRITGGSSSGSASAVSSGLCDFALG 129
Query: 177 TDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ 236
TDT G VR PA+ CG+ G RP+HG VS+ VL + SLDT G AR+ RVG VLL
Sbjct: 130 TDTGGSVRAPANHCGLYGLRPTHGRVSLESVLDLAPSLDTCGWFARDVGTFVRVGDVLLG 189
Query: 237 LNAVEPRRARRLIFADDIFQLSKVPKLKTIHV-ISKAIESLSGYQNPEHMNVGQYIASNV 295
+ RL++ +D++ + P + + +++++SL G P + V + +
Sbjct: 190 EDVTPLPADVRLLWPEDVWAMMDAPARRVLESGAAQSVQSLLGPTTPVQV-VRESWDAMY 248
Query: 296 PSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLE 355
+ + ++++ +G ++RY P LG V ER
Sbjct: 249 WNFRYVQSREAWLTDGPL-----------IERY-------------APSLGPGVAERFAW 284
Query: 356 AINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSD-PPLKLNTKKTYSAEFHDRT 414
+ N T + + R RA L LL DD +L++PT+ D PL+ ++ + ++ +R
Sbjct: 285 SCNVTDEQVNAARAFRAAFRAQLAGLLGDDGVLLMPTMPDIAPLRSASEASLE-DYRNRA 343
Query: 415 LVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+ + I ++G Q+++P+ ++ P+ +S + G D+ LL
Sbjct: 344 IRMLCIAGLAGFPQLSMPMARHEGAPLGLSLLGPAGRDRSLL 385
>gi|398808822|ref|ZP_10567680.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Variovorax sp. CF313]
gi|398086831|gb|EJL77438.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Variovorax sp. CF313]
Length = 392
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 141/407 (34%), Positives = 193/407 (47%), Gaps = 40/407 (9%)
Query: 58 LIPFPQPP-PPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLL 116
+P+P P P AA PL L FA KD+FDV GY TG G+P RTA V LL
Sbjct: 10 FVPYPDAPVPRAATGPLVDLSFAAKDLFDVAGYPTGGGNPIVLAMSGIKTRTAPTVQKLL 69
Query: 117 KNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALG 176
GA GKTV DE AF + G N H+G PVN P I GGSSSGSA AV++ L DFALG
Sbjct: 70 DAGARFAGKTVTDELAFSMNGNNAHFGAPVNGGAPLRIAGGSSSGSASAVSSNLCDFALG 129
Query: 177 TDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ 236
TDT G VR PA+ CG+ G RP+HG VS+ G L + S DT G AR+ RV VLL
Sbjct: 130 TDTGGSVRAPANHCGLYGLRPTHGRVSLEGALDLAPSFDTCGWFARDVGTFARVADVLLG 189
Query: 237 LNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVP 296
+A RL+ DD++ L+ + + ++ L G
Sbjct: 190 ADAATLPERVRLLRPDDVWALAVPAAADALQGAAGRVQDLLG------------------ 231
Query: 297 SLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEW------VKSAKPRLGYNVF 350
P GT AL S + + E W ++ P LG V
Sbjct: 232 -----------PAQGTTV--ALESFDAMYWHFRYLQSREAWLTDGPLIERYAPPLGPGVA 278
Query: 351 ERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSD-PPLKLNTKKTYSAE 409
ER + T + R RA L LL D +L++PT+ D PL+ +++ + +
Sbjct: 279 ERFAWSREVTDAQVTTARIFRTAFRAHLTHLLGTDGVLLLPTMPDIAPLRSDSEASME-D 337
Query: 410 FHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+ +R + + I ++G Q++IP+ P+ IS + G D+ L+
Sbjct: 338 YRNRAIRMLCIAGLAGFPQLSIPLATREGAPLGISLLGPAGSDRSLV 384
>gi|159481398|ref|XP_001698766.1| amidase [Chlamydomonas reinhardtii]
gi|158273477|gb|EDO99266.1| amidase [Chlamydomonas reinhardtii]
Length = 507
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 141/421 (33%), Positives = 195/421 (46%), Gaps = 29/421 (6%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA PL GL FA+KD+FDV G+ TGFG+P W H A RTA V LL GAT GKT
Sbjct: 78 AAEGPLKGLTFAVKDLFDVAGHRTGFGNPVWLDTHPPATRTAPAVQALLDAGATLRGKTH 137
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
+DE A+ + GEN HYGTP NP P IPGGSSSGSAVA AA V ALG+DT G VRVPA
Sbjct: 138 MDELAYSLNGENVHYGTPRNPAAPGRIPGGSSSGSAVAAAAGDVPLALGSDTGGSVRVPA 197
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGL-------------------LARNASILH 228
++CG+ G RP+ G ++ G P + S DT G L +
Sbjct: 198 AYCGLFGIRPTWGRTNLEGARPLAPSFDTAGWSALRAAVQVAVAAGDVDIGLGTDTGGSI 257
Query: 229 RVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVG 288
RV L A+ P R + ++ L + + + + H + G
Sbjct: 258 RVPASFCGLLALRPTWGR--VSSEATTALGSLATRRRCVPPGLCCWTRHPGRPARHASPG 315
Query: 289 QY---IASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRL 345
+ S P+ R +T +A A S+ + +E + WV P
Sbjct: 316 GWWRVTPSGWPTRPQRRPSTTPCRRISARWAAPSA-----RGFEVWREHGAWVTEHNPAF 370
Query: 346 GYNVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKT 405
G + +R + A TQ+ + R +R+ L LL D +L +PT P +NT
Sbjct: 371 GPGIKDRFIMASRITQEQVDAANVKRALIRSHLLTLLGSDGVLALPTTPGPAPLVNTPPA 430
Query: 406 YSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDS 465
+ R + L+SI ++G QV +PI + P+ + I G D+ LL+ L
Sbjct: 431 ELDAWRTRLISLTSIAGLAGLPQVNLPIASVDGLPVGLGLIGPPGSDEALLELAEQLMGV 490
Query: 466 L 466
L
Sbjct: 491 L 491
>gi|109898372|ref|YP_661627.1| amidase [Pseudoalteromonas atlantica T6c]
gi|109700653|gb|ABG40573.1| Amidase [Pseudoalteromonas atlantica T6c]
Length = 405
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 184/388 (47%), Gaps = 31/388 (7%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A+KD+F +KG T G+PDW H ++T+ V LL GA+ +GKT+ DE A
Sbjct: 37 LNGVSLAVKDLFHIKGLPTTAGNPDWLASHPAPQQTSPAVNALLHAGASLVGKTITDELA 96
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+ + G+N HYGTP N P +PGGSSSGSAVAV LGTDT G +RVPAS+ G+
Sbjct: 97 YSLNGQNIHYGTPFNISAPDRLPGGSSSGSAVAVREGSAQVGLGTDTGGSIRVPASYNGL 156
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVE---PRRARRLI 249
G RP+HG VS ++ + S DTVG + R+ S L +V VLL + + P + ++
Sbjct: 157 FGLRPTHGRVSCEHMVSLAPSFDTVGWITRDLSTLDKVAQVLLNKDDDQTPCPVKDAKIG 216
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
FA+++ + Y + + + GL + +
Sbjct: 217 FAEELAAQCE-------------------YSDTLGTAYNRMVKRQCTLSSGLSSDLLTQA 257
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
+GT + LQ YE + +W+ KP ++ ER T+D + K
Sbjct: 258 SGTFRI---------LQGYEIWQTHGQWITELKPTFAPDIQERFEWCATITEDQQQNAKK 308
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
+ E + +Q L ++ +PT +NT A + + + L+ I + G Q+
Sbjct: 309 KQKEFISHIQHLFSQCDVIFLPTTPGAAPLINTPSEQLATYRNTLMNLTCIAGLCGLPQL 368
Query: 430 AIPIGKYNEHPISISFITYHGGDKFLLD 457
IP+ + PI S I DK L++
Sbjct: 369 HIPLAINPQAPIGFSLIGQKNHDKQLIE 396
>gi|424876493|ref|ZP_18300152.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. viciae WSM1455]
gi|393164096|gb|EJC64149.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. viciae WSM1455]
Length = 391
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 137/395 (34%), Positives = 196/395 (49%), Gaps = 41/395 (10%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
A+ LAGL FA+KD+ D+ TG G+PDW+ A A VVT LL NGATC+GKTV
Sbjct: 26 AQGSLAGLTFAVKDLIDIARRRTGGGNPDWRAAATPAAAHAPVVTRLLANGATCLGKTVT 85
Query: 129 DEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPAS 188
DE AF + G N HYG P NP+ P +PGGSSSGSA AV A++VDFA+GTDT G VRVPA+
Sbjct: 86 DELAFSLEGRNVHYGIPRNPRNPDWLPGGSSSGSAAAVGARVVDFAIGTDTGGSVRVPAA 145
Query: 189 FCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRL 248
F GI G RPSH V + GV+ + S DT+G AR+A L RVG VL
Sbjct: 146 FSGIWGMRPSHDAVPLDGVILFAPSYDTIGWFARDAQTLARVGDVL-------------- 191
Query: 249 IFADDIFQLSKVPKLK--TIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQST 306
L P + TI ++ ++ L + + A+ P +R
Sbjct: 192 --------LPPAPHVDCLTISIVEDTLDMLDPADAHAFRDAARRFANAAP----MRVFEH 239
Query: 307 SPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKI 366
P +A L+ S ++Q YE + + KPR ++ ER A + + +
Sbjct: 240 WP---SAQLQWAYS---TIQGYEIARSLGSRLDALKPRFAMDIGERFASASAISYADYET 293
Query: 367 LYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGC 426
VR LQ L + ++P S P L+++ F+ TL L+++ +G
Sbjct: 294 AAAVRRSFAGWLQERLPPGTVALLPVTSVPHLRIDALSEEIGRFYASTLALTALAGHAGT 353
Query: 427 CQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLD 461
Q+ + P+S+ + G D+ +L+ L+
Sbjct: 354 PQL-----QCGSSPLSV--MGGCGSDRAILNFALE 381
>gi|406669781|ref|ZP_11077044.1| hypothetical protein HMPREF9707_00947 [Facklamia ignava CCUG 37419]
gi|405581751|gb|EKB55760.1| hypothetical protein HMPREF9707_00947 [Facklamia ignava CCUG 37419]
Length = 411
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 190/383 (49%), Gaps = 32/383 (8%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA PL G+ FA+KDVFD+ G G P W + H A T+ + +L+ GA +GKT+
Sbjct: 36 AAEGPLKGMAFAVKDVFDIVGSTYSNGHPMWLQTHEPATETSSFIVNMLEAGADLVGKTI 95
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
DE + I+GEN +YG+P+NP P GGSSSG+ AVA VD A G+D +G VRVPA
Sbjct: 96 CDELCYSISGENWNYGSPLNPHDPRRYCGGSSSGTGAAVAGGYVDVAFGSDCLGSVRVPA 155
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
++ G+LG RP+ V G P +S+D +G +A++ + +V
Sbjct: 156 AYNGVLGIRPTLYRVDNSGEAPYCKSMDVLGYVAQDPDVFEQVS---------------E 200
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
I +D Q S LK + + ++ + NV +++ S++ +KG +
Sbjct: 201 FILGEDQHQQS----LKRLFIPVDLLDVVDD-------NVREHLKSSIGRIKGYFDEVVE 249
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
+ L+ V +Q YE Y W + +P+L R+ A T +
Sbjct: 250 GKICPGDLQDWVKVFQHIQGYEVWESYGGWYRKYRPQLSEGPGSRLEWASTITYAQYQAA 309
Query: 368 YKVRNEMRAALQRLLKDDKILVIPTVSD-PPLKLNTKKTYSAEFHDR--TLVLSSIGSMS 424
+ R E+ + +++ +D ++V+PT + PL+ +++++ + H R + L I +S
Sbjct: 310 LEAREEIIKQVDQVITEDTVVVLPTAASIAPLRTDSEESIN---HTRLQSSQLLCISPLS 366
Query: 425 GCCQVAIPIGKYNEHPISISFIT 447
G QV +PI E P+ +S ++
Sbjct: 367 GVPQVTLPIATMEEVPLGVSLLS 389
>gi|409408484|ref|ZP_11256919.1| Amidase [Herbaspirillum sp. GW103]
gi|386431806|gb|EIJ44634.1| Amidase [Herbaspirillum sp. GW103]
Length = 396
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 135/402 (33%), Positives = 207/402 (51%), Gaps = 30/402 (7%)
Query: 58 LIPFP-QPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLL 116
+P+P P P A+ PLAG++ A+KD+FDV GY TG G+P +A V LL
Sbjct: 11 FVPYPFVPQPHASSGPLAGVRLAVKDIFDVAGYPTGCGNPHMLALSGIKTDSAPAVQALL 70
Query: 117 KNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALG 176
+ GA +GK DE AF + G+N H+GTP N P IPGGSSSGSA AV+ L D ALG
Sbjct: 71 QAGAQFVGKVYTDELAFSMNGKNAHFGTPRNGGAPDRIPGGSSSGSASAVSNGLADLALG 130
Query: 177 TDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLL- 235
TDT G VRVPAS CG++G RP+HG V + V+ + S DT G AR+ + R G VLL
Sbjct: 131 TDTGGSVRVPASHCGLIGLRPTHGRVWLERVMELAGSFDTCGWFARDMDVFSRAGAVLLG 190
Query: 236 QLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNV 295
+ +A P + R L+ AD + L+ P+++ + ++ L G + Q + +
Sbjct: 191 EDSAPLPAQPRVLVAADVLALLA--PRVQA--QFGQLLDRLDGV-----LGTPQPVKAAG 241
Query: 296 PSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLE 355
PS AL +Q YE + E + +LG V ER
Sbjct: 242 PSFD-----------------ALYWAFRHIQGYEAWRAHGENISRHGFQLGPGVAERFAW 284
Query: 356 AINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSD-PPLKLNTKKTYSAEFHDRT 414
+ T ++ VR R + RLL D +L++P+ D PL +++++ ++ ++
Sbjct: 285 SSTITPQQMEEHSAVRRTFRESFTRLLGQDGVLLLPSAPDVAPLLTDSEQSLE-DYRNQA 343
Query: 415 LVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+ + + +SG Q+++P+ + + P +S I G D+ L+
Sbjct: 344 VRMLCLSGLSGFPQISLPLMQLDGAPFGLSLIAPPGSDRSLI 385
>gi|351731780|ref|ZP_08949471.1| amidase [Acidovorax radicis N35]
Length = 394
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 131/395 (33%), Positives = 194/395 (49%), Gaps = 39/395 (9%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
A+ PL+GL FA KD+FDV GY TG G+P RTA V LL GA +GKTV
Sbjct: 21 ASTGPLSGLCFAAKDLFDVAGYPTGGGNPVVLALSGTKTRTAPTVQKLLDAGARFVGKTV 80
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
DE AF + G N H+G P+N P I GGSSSGSA AV++ L DFALGTDT G VR PA
Sbjct: 81 TDELAFSMNGNNAHFGAPLNGAAPDRITGGSSSGSAAAVSSGLCDFALGTDTGGSVRAPA 140
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
+ CG+ G RP+HG VS+ G + + SLDT G AR+ RV VLL +A R
Sbjct: 141 NHCGLYGLRPTHGRVSLEGAMDLAPSLDTCGWFARDVQTFARVADVLLGDDAAPLPPRVR 200
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
L+ D++ L + + ++ + L G P +
Sbjct: 201 LLLPTDVWALLDPTVVGALQGATQQVTDLLGPSQPAN----------------------- 237
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSA------KPRLGYNVFERVLEAINTTQ 361
A L++ ++ + + + + E W+ P LG V ER + + T
Sbjct: 238 -----AVLESFDTMYWNFRYVQGR---EAWMTDGPLIERYAPPLGPGVAERFAWSRDVTD 289
Query: 362 DNIKILYKVRNEMRAALQRLLKDDKILVIPTVSD-PPLKLNTKKTYSAEFHDRTLVLSSI 420
+ R+ RA L LL D +L++PT+ D PL+ + + ++ +R + + I
Sbjct: 290 GQVASARAFRDRYRAHLAALLGRDGVLLLPTMPDIAPLRTAPESSLE-DYRNRAIQMLCI 348
Query: 421 GSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFL 455
+SG Q+++P+ + + P+ +S + G D+ L
Sbjct: 349 AGLSGFPQLSMPLARRDGAPLGLSLLGPAGSDRSL 383
>gi|354596671|ref|ZP_09014688.1| Amidase [Brenneria sp. EniD312]
gi|353674606|gb|EHD20639.1| Amidase [Brenneria sp. EniD312]
Length = 395
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 141/403 (34%), Positives = 201/403 (49%), Gaps = 37/403 (9%)
Query: 56 FELIPFPQPPPPAA-----RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAV 110
F +P+P PAA + PL+G FA+KD+FDV GY TG GSP RTA
Sbjct: 6 FAFMPYP----PAAVEHAPQGPLSGFTFAVKDLFDVAGYPTGGGSPHILAMSGIKRRTAP 61
Query: 111 VVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQL 170
V LL GA +GKT +E AF ++G+N HYGTP N P IPGGSSSGSA AV+ +L
Sbjct: 62 TVRRLLDAGAEFVGKTHTNEMAFSMSGKNAHYGTPRNGAAPERIPGGSSSGSAAAVSNRL 121
Query: 171 VDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRV 230
DFALGTDT G +R PAS+CG+ G RPSHG +S+ P + S+DT G R+A + RV
Sbjct: 122 CDFALGTDTGGSIRTPASYCGLFGLRPSHGRISLDDCQPLAPSMDTAGYFTRDADLFERV 181
Query: 231 GHVLL-QLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQ 289
G LL + +A P +A+ +I + +F L + + ++I+ ++G +P
Sbjct: 182 GECLLGEDDAPLPPQAQWVI-SHALFDLLPAASQQALRPALESIKDVAGELSP------- 233
Query: 290 YIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNV 349
++ +P+L+ + A L + RY F LG +V
Sbjct: 234 -LSGELPALEEAYWAFRFIQGREAWLTQGEKIT----RYGFA-------------LGPDV 275
Query: 350 FERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAE 409
R T + + +VR R A Q LL ++ILV+PTV D L+ + +
Sbjct: 276 AGRFAWGAGVTDEQYQNACRVRERFRDAWQALLG-NRILVLPTVPDIAPLLDARDEDIEQ 334
Query: 410 FHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGD 452
+ L SI + G Q+ +P+ P+ IS I G D
Sbjct: 335 TRQLSHHLLSIAVLCGIPQLNLPLTYKEGAPLGISLIGPRGSD 377
>gi|390449988|ref|ZP_10235586.1| amidase [Nitratireductor aquibiodomus RA22]
gi|389663123|gb|EIM74660.1| amidase [Nitratireductor aquibiodomus RA22]
Length = 395
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 134/410 (32%), Positives = 197/410 (48%), Gaps = 34/410 (8%)
Query: 58 LIPFPQPPPPAARQ-PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLL 116
+ +P PPPA+ + PLAGL +KD+FDV GY TG G+P H A T + LL
Sbjct: 11 FLDYPDAPPPASGEGPLAGLTLGVKDIFDVAGYPTGGGNPRRAEIHSRAPDTTPPIQSLL 70
Query: 117 KNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALG 176
GA IGKT DE F + G+N HY PVN P GGSSSGSA AVA L D A G
Sbjct: 71 DAGARFIGKTQTDELTFSMIGQNAHYPAPVNRAAPQRFTGGSSSGSAAAVAGGLADIAAG 130
Query: 177 TDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ 236
+DT G +R PAS+CG++G R +HG + + G +P + S DT G AR+A+ RVG VLL
Sbjct: 131 SDTNGSIRAPASYCGLIGLRTTHGRIPLDGAMPLAPSFDTFGWFARDAATYARVGEVLLG 190
Query: 237 LNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVP 296
+ + DD+ + ++P+ + + K E G +++ V
Sbjct: 191 NDPYD----------DDLARPVRIPEFEALLFGEK-----------ERAVYGTMLSTVVH 229
Query: 297 SLK---GLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERV 353
A SPE L +Q +E ++ ++++SAKP LG V ER
Sbjct: 230 HFDREAAFLALPGSPEQ-------LFECFRIIQTFEAWEVHGDFIRSAKPELGPGVRERF 282
Query: 354 LEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPT-VSDPPLKLNTKKTYSAEFHD 412
+ + R + L D +LV+PT + PLK T++ +
Sbjct: 283 EFGSRISAATVAGARAERRRFQQDFAALFDHDMVLVMPTQPTAAPLKSATQEELD-RYRG 341
Query: 413 RTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDL 462
L L++I + G ++ IP+G+ + P IS + G D+ L+ D+
Sbjct: 342 LALKLTAIAGLLGWPEITIPLGQVHGAPFGISLLGPAGSDRQLIRLAADI 391
>gi|424014997|emb|CCM43858.1| amidase family protein [Janthinobacterium agaricidamnosum]
Length = 430
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 141/422 (33%), Positives = 191/422 (45%), Gaps = 39/422 (9%)
Query: 50 GAFL-ERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERT 108
GAF+ E F + PP L GL+ A KDVF + G G G+P W A +
Sbjct: 41 GAFVSEGFGI----APPVAIYSDELGGLRLAAKDVFALAGQRIGAGNPAWLAGQQPASGS 96
Query: 109 AVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAA 168
A+ + LLL GA +GKTV DE AF + G N+HYGTPVNP P +PGGSSSGSAVAVAA
Sbjct: 97 ALAIELLLGAGAAWVGKTVTDELAFSLMGINRHYGTPVNPASPLRLPGGSSSGSAVAVAA 156
Query: 169 QLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILH 228
D ALGTD G R+PAS+CGI G RP+ G ++ G + S DTVG A + + L
Sbjct: 157 GHADIALGTDCGGSCRLPASYCGIWGIRPTQGVIAKNGCFALAHSFDTVGWFAADGASLG 216
Query: 229 RVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVG 288
V VL Q + + A L +DD P + A+ L+ + H
Sbjct: 217 AVFKVLAQ-QEIPSKHAAVLHISDDALAGCS-PAVN--RAFEAALADLAARFDKRH---- 268
Query: 289 QYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYN 348
VPS G L + LQ E + WV + LG +
Sbjct: 269 ------VPS-------------GRLPLPPWAQAHRVLQSAEIWQQHGAWVTAHGDSLGSD 309
Query: 349 VFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKD-DKILVIPTVSD-PPLKLNTKKTY 406
V R A T+ ++ VR + L LL L++PT D PL + T
Sbjct: 310 VRRRFDNAAAVTRQDVSSQQIVRIQAMTTLTALLPGLHDFLLLPTAPDIAPLCDASDATL 369
Query: 407 SAEFHDRTLV--LSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYD 464
H R L I ++G QV++P + + P+ +S I G D L+ ++
Sbjct: 370 D---HHRINAQHLLCIAGLAGLPQVSMPWIQIDGAPVGLSLIGCRGNDAGLIAAAQAVHA 426
Query: 465 SL 466
+L
Sbjct: 427 TL 428
>gi|319791578|ref|YP_004153218.1| amidase [Variovorax paradoxus EPS]
gi|315594041|gb|ADU35107.1| Amidase [Variovorax paradoxus EPS]
Length = 392
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 138/407 (33%), Positives = 195/407 (47%), Gaps = 40/407 (9%)
Query: 58 LIPFPQPP-PPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLL 116
+P+P P A PL+ L FA KD+FDV GY TG G+P RTA V LL
Sbjct: 10 FVPYPDAPVARAGTGPLSDLSFAAKDLFDVAGYPTGGGNPIVLAMSGIKTRTAPTVQKLL 69
Query: 117 KNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALG 176
GA GKTV DE AF + G N H+G P N P I GGSSSGSA AV++ L DFALG
Sbjct: 70 DAGARFAGKTVTDELAFSMNGNNAHFGAPANGGAPLRITGGSSSGSASAVSSNLCDFALG 129
Query: 177 TDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ 236
TDT G VR PA+ CG+ G RP+HG VS+ G L + S DT G AR+ RV VLL
Sbjct: 130 TDTGGSVRAPANHCGLYGLRPTHGRVSLEGALDLAPSFDTCGWFARDIGTFARVADVLLG 189
Query: 237 LNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVP 296
+A RL+ DD++ L+ + + + ++SL G
Sbjct: 190 ADAQALPERVRLLRPDDVWALAVPAAAEALQDAADRVQSLLG------------------ 231
Query: 297 SLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEW------VKSAKPRLGYNVF 350
P GT A+ S + + E W ++ P LG V
Sbjct: 232 -----------PAKGTTV--AMESFDAMYWHFRYLQSREAWLTDGPLIERYAPPLGPGVA 278
Query: 351 ERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSD-PPLKLNTKKTYSAE 409
ER + + T + R RA L LL D +L++PT+ D PL+ +++ + +
Sbjct: 279 ERFAWSRDVTDAQVATARVFRTAFRAHLANLLGTDGVLLMPTMPDIAPLRSDSEASME-D 337
Query: 410 FHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+ +R + L I ++G Q+++P+ + P+ IS + G D+ L+
Sbjct: 338 YRNRAIRLLCIAGLAGFPQLSMPLATRDGAPLGISLLGPAGSDRSLI 384
>gi|335421114|ref|ZP_08552141.1| amidase [Salinisphaera shabanensis E1L3A]
gi|334892696|gb|EGM30925.1| amidase [Salinisphaera shabanensis E1L3A]
Length = 404
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/400 (32%), Positives = 198/400 (49%), Gaps = 33/400 (8%)
Query: 62 PQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGAT 121
P P L+GL FA+KDVFD+ G TGFG P W H A+ A + LL G
Sbjct: 16 PAALAPTGEGVLSGLLFAVKDVFDIAGTRTGFGQPQWLASHPPADTNADCIDRLLAAGGE 75
Query: 122 CIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIG 181
+G+T+ DE + +TG+N HYG P N + GGSSSGSA AV A LVDFALGTD G
Sbjct: 76 LVGRTISDELCYSLTGDNIHYGAPANSWGLGRLAGGSSSGSAAAVCAGLVDFALGTDCGG 135
Query: 182 CVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVE 241
VRVP+S+CG+LG R +HG V+ G+L + D +G AR+A I RVG VLL +A E
Sbjct: 136 SVRVPSSYCGLLGLRTTHGRVATRGLLRFASQFDCIGWFARDAHIFERVGRVLLP-DARE 194
Query: 242 PRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGL 301
+R++ A D F+ A+++ + A+ +P+L+ L
Sbjct: 195 QGAFKRVLIATDAFE---------------AVDT-------------EIAAAFLPALETL 226
Query: 302 RAQSTSPENGTATLKALSSVMLSLQRYEFKTIYE---EWVKSAKPRLGYNVFERVLEAIN 358
AQ+ + L+ + + + +++ +WV +P LG V ER+ +A
Sbjct: 227 GAQADRMQEIQLAEDGLAEWFETFRIIQAADVWDALGDWVAQTRPTLGPGVRERIEQAGQ 286
Query: 359 TTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLN-TKKTYSAEFHDRTLVL 417
++ R E+ L L+ +D ++V+PT P T + + + + L
Sbjct: 287 INAAQLREAQAHRAEIVKRLDALIGEDDVVVLPTTPRPAPPRGATDEALETTYRYQAMSL 346
Query: 418 SSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
++G Q+ +P+ + P+ +S +T GD L++
Sbjct: 347 LCSAGLAGLPQMNLPLAMKDGLPLGLSIMTRRNGDMRLIE 386
>gi|94310875|ref|YP_584085.1| amidase [Cupriavidus metallidurans CH34]
gi|93354727|gb|ABF08816.1| Amidase [Cupriavidus metallidurans CH34]
Length = 396
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 143/413 (34%), Positives = 203/413 (49%), Gaps = 52/413 (12%)
Query: 58 LIPFPQPP-PPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLL 116
+P+P P P AA PL GL FA+KD+FDV GY TG G+P TA V LL
Sbjct: 11 FLPYPDAPVPNAANGPLRGLTFAVKDLFDVSGYPTGGGNPHVLARSGIKTTTAPTVQKLL 70
Query: 117 KNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALG 176
GA +GK DE AF + G+N HYG P N P I GGSSSGSA AV+ +L DFALG
Sbjct: 71 DAGAAFVGKVHTDELAFSMNGQNHHYGGPYNGAAPDRITGGSSSGSASAVSNKLCDFALG 130
Query: 177 TDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ 236
TDT G VR PAS CG+ G RPSHG +S+ +P ++LDT G AR+ + RV VLL
Sbjct: 131 TDTGGSVRAPASHCGLFGIRPSHGRISLTHCMPLCETLDTCGFFARDIATFARVADVLLG 190
Query: 237 LNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVP 296
+A RL+ A D+F+L K + + IE++ G +P ++V
Sbjct: 191 ADANPLPSRPRLLLAADLFELPTPEARKALAPATARIEAVLGKASP--VDVAD------- 241
Query: 297 SLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEW------VKSAKPRLGYNVF 350
+ LS + + + + +E W +++ +LG +V
Sbjct: 242 -------------------RPLSDLYWA---FRYVQGWEAWRADGALIENYGLQLGPDVA 279
Query: 351 ERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSD-PPLK------LNTK 403
R + T + VR E A L LL D IL++PT+ D PL+ L
Sbjct: 280 GRFAFSKEVTAAQFEKSSAVRREFTAHLGCLLGQDGILLLPTMPDIAPLRTTPMEALEDY 339
Query: 404 KTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+T +A TL L+ ++G Q+++P+ + P+ +S I G D+ L+
Sbjct: 340 RTTAAH----TLCLT---PLTGFPQLSLPLSGRDGAPLGVSLIGPMGSDRSLI 385
>gi|430810132|ref|ZP_19437247.1| amidase [Cupriavidus sp. HMR-1]
gi|429497366|gb|EKZ95899.1| amidase [Cupriavidus sp. HMR-1]
Length = 396
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 144/413 (34%), Positives = 204/413 (49%), Gaps = 52/413 (12%)
Query: 58 LIPFPQPP-PPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLL 116
+P+P P P AA PL GL FA+KD+FDV GY TG G+P TA V LL
Sbjct: 11 FLPYPDAPVPNAASGPLHGLTFAVKDLFDVSGYPTGGGNPHVLARSGIKTTTAPTVQKLL 70
Query: 117 KNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALG 176
GA +GK DE AF + G+N HYG P N P I GGSSSGSA AV+ +L DFALG
Sbjct: 71 DAGAAFVGKVHTDELAFSMNGQNHHYGGPYNGTAPDRITGGSSSGSASAVSNKLCDFALG 130
Query: 177 TDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ 236
TDT G VR PAS CG+ G RPSHG +S+ +P ++LDT G AR+ + RV VLL
Sbjct: 131 TDTGGSVRAPASHCGLFGIRPSHGRISLTHCMPLCETLDTCGFFARDIATFARVADVLLG 190
Query: 237 LNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVP 296
+A RL+ A D+F+L K + + IE++ G +P ++V
Sbjct: 191 ADANPLPSQPRLLLAADLFELPTPEARKALAPAAARIEAVLGKASP--VDVAD------- 241
Query: 297 SLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEW------VKSAKPRLGYNVF 350
+ LS + + + + +E W +++ +LG +V
Sbjct: 242 -------------------RPLSDLYWA---FRYVQGWEAWRADGALIENYGLQLGPDVA 279
Query: 351 ERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSD-PPLK------LNTK 403
R + T + VR E A L RLL D IL++PT+ D PL+ L
Sbjct: 280 GRFAFSKEVTAAQFEKSSAVRREFTAHLGRLLGQDGILLLPTMPDIAPLRTTPMEALEDY 339
Query: 404 KTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+T +A TL L+ ++G Q+++P+ + P+ +S I G D+ L+
Sbjct: 340 RTTAAH----TLCLT---PLTGFPQLSLPLSGRDGAPLGLSLIGPMGSDRSLI 385
>gi|261855471|ref|YP_003262754.1| amidase [Halothiobacillus neapolitanus c2]
gi|261835940|gb|ACX95707.1| Amidase [Halothiobacillus neapolitanus c2]
Length = 391
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 186/388 (47%), Gaps = 35/388 (9%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L GL+ +KD+FD+ G T G+PDW H E TA V L+ GA + KT+ DE A
Sbjct: 23 LCGLRVGVKDLFDIAGIPTSAGNPDWLATHAVPEHTAPAVLQLMHAGAHIVAKTLTDELA 82
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+ + G N HYGTP+N P +PGGSSSGSA VA L D LGTDT G +RVP+S+ G+
Sbjct: 83 YSLNGINTHYGTPINAASPERLPGGSSSGSAAMVAHGLADIGLGTDTGGSIRVPSSYNGL 142
Query: 193 LGYRPSHGTVS---MIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
G RP+HG +S M+G+ P S DTVG + R+ L V VLL P +
Sbjct: 143 FGLRPTHGVISVEHMVGLAP---SFDTVGWMTRDLGTLADVADVLL------PEQ----- 188
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
+ +LK + ++ I+ L + + ++A+N P + + + P
Sbjct: 189 ---------QPIELKNLCILKPQIDCLEDWD----LRASAWLATNGPLFESIH-EVVVPR 234
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
+ L+ S LQ E + WV A+PR ++ ER+ + T I+ +
Sbjct: 235 S---LLQLASQTFRILQGAEIWHTHGAWVSEARPRFAADIRERMNWCQSITSVQIEQAAR 291
Query: 370 VRNEMRAALQRLLKDDKIL-VIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQ 428
R E+ L L + L ++PT L A++ + L+++ +S Q
Sbjct: 292 DRIEITQILSHWLDGEHTLAILPTTPGAAPLLTESAECLADYRVALMGLTALAGLSSRPQ 351
Query: 429 VAIPIGKYNEHPISISFITYHGGDKFLL 456
+ +P+ + P +S I + D+ L+
Sbjct: 352 LHLPVLSDHGAPWGLSLIGHRNTDRSLI 379
>gi|347820309|ref|ZP_08873743.1| amidase [Verminephrobacter aporrectodeae subsp. tuberculatae At4]
Length = 400
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 136/403 (33%), Positives = 201/403 (49%), Gaps = 32/403 (7%)
Query: 58 LIPFPQPPPPAARQ-PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLL 116
+P+P PAA PL L+F +KD+FDV GY TG G+P R+A V LL
Sbjct: 11 FVPYPAVAVPAAPTGPLTDLRFGVKDLFDVAGYPTGGGNPILLALSGIKTRSAPTVQKLL 70
Query: 117 KNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALG 176
GA GKTV DEFAF + G N H+G P+N I GGSSSGSA V++ L DFALG
Sbjct: 71 DAGARFAGKTVTDEFAFSMNGNNAHFGAPLNGAARERITGGSSSGSASVVSSGLCDFALG 130
Query: 177 TDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ 236
TDT G VR PA+ CG+ G RP+HG VS+ G L + S DT G AR+ RV VLL
Sbjct: 131 TDTGGSVRAPANHCGLYGLRPTHGRVSLEGALDLAPSFDTCGWFARDVGSFARVADVLLG 190
Query: 237 LNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIAS--N 294
+A + RL++ DI+ + + P + ++ ++SL G P + + + A N
Sbjct: 191 ADAKPLPQRPRLLWPKDIWAMLEAPVRDALDGTAQRVQSLLGPATPLDVVLESWDAMYWN 250
Query: 295 VPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVL 354
L+G A T +G ++RY P LG +V ER
Sbjct: 251 FRYLQGREAWLT---DGPL-----------IERY-------------APPLGPDVAERFA 283
Query: 355 EAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSD-PPLKLNTKKTYSAEFHDR 413
+ T + R + RA L + L D +L++P++ D PL+ N + ++ +R
Sbjct: 284 WSRAVTDAQVNTARAFRLDFRARLAQTLGSDGVLLMPSMPDIAPLR-NATGSSLEDYRNR 342
Query: 414 TLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+ + + + G Q+++P+ + P+ IS + G D+ L+
Sbjct: 343 AIRMLCLAGLGGFPQLSMPLAQRAGAPLGISLLGPAGADRSLV 385
>gi|424919918|ref|ZP_18343281.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WSM597]
gi|392848933|gb|EJB01455.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WSM597]
Length = 389
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/396 (30%), Positives = 202/396 (51%), Gaps = 42/396 (10%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
A+ PL+GL+ A+KD+FDV GY T G+ TA +V LL+ GA +GKT
Sbjct: 19 ASTGPLSGLRLAVKDLFDVAGYPTSAGNAAVLAASGIKTATAPLVQTLLEAGACFVGKTN 78
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
DE A+ + G N H+G P+NP+ P+ IPGGSSSGSAVAVAA L D LGTDT G +R+PA
Sbjct: 79 TDELAYSLIGGNIHFGMPINPRDPTLIPGGSSSGSAVAVAAGLADLGLGTDTSGSIRLPA 138
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN----ASILHRVGHVLLQLNAVEPR 243
+ G++G+RP+HG++ + P + S D G + R+ A+++ VG
Sbjct: 139 AINGLVGWRPTHGSLDNRALRPLAPSFDVPGFMTRSLDPMAAVMSAVGMPAAN------D 192
Query: 244 RARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRA 303
R ++ A+DIF+ I AI + IAS S +R
Sbjct: 193 RPLSILIAEDIFE-----------TIDGAIAD-------------EMIASLRSSAMPIRR 228
Query: 304 QSTSPENGTATLKALSSVMLSLQRYEF-KTIYEEWVKSAKPRLGYNVFERVLEAINTTQD 362
+ L + +L + +E +T++E ++ P ++ R+ A +
Sbjct: 229 TAAICSFSLTDLALAFTTILQKEAWESNQTLFERGPEAIAP----DIAARLRSASRLDNE 284
Query: 363 NIKILYKVRNEMRAALQRLLKDDKILVIPTVS-DPPLKLNTKKTYSAEFHDRTLVLSSIG 421
++ Y++R A + RLL+++ ++ +PT++ PP + ++++A F + L +
Sbjct: 285 EVRTAYRIRKLFSAKVDRLLRENVVVALPTLAMSPPTRDAGPESFAA-FRSACVKLLCLS 343
Query: 422 SMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
+SGC Q+A PI ++ +S+S + D+ L++
Sbjct: 344 GLSGCPQLAFPIASRVKN-VSLSLLGARSADRMLMN 378
>gi|333909465|ref|YP_004483051.1| Amidase [Marinomonas posidonica IVIA-Po-181]
gi|333479471|gb|AEF56132.1| Amidase [Marinomonas posidonica IVIA-Po-181]
Length = 397
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 189/388 (48%), Gaps = 30/388 (7%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L GL+ A+KD+F ++G T G+P W H TA V L+ NGA +GKT+ DE A
Sbjct: 30 LTGLRLAVKDLFHMQGLPTTAGNPTWLATHPTPNSTAPSVVTLMANGAEFVGKTITDELA 89
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+ + G+N HYGTP NP P+ +PGGS+SGSAVAV+ L D LGTDT G +RVPAS+ G+
Sbjct: 90 YSLNGQNIHYGTPENPVTPNRLPGGSTSGSAVAVSLGLADIGLGTDTGGSIRVPASYQGL 149
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRA---RRLI 249
G RP+HG +S ++ + S DTVG + ++ +L + VLL L+ + + +R++
Sbjct: 150 FGLRPTHGAISAEHLVALAPSFDTVGWVTKHLDVLEKTAQVLLPLSTSDWSKNNTFKRVL 209
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
D++F+ +V + + + A + E + T
Sbjct: 210 VVDNLFR--QVAHQQALQDVLAAWRHDGKLSSEERFVI-----------------DTDKW 250
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
+AT + +LQ E + + +W+ P ++ +R ++ + +
Sbjct: 251 QTSATFR-------TLQGREIQREHGQWIAEVDPDFATDIAQRFDWCQTLSEADESAALR 303
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
R L L D +L++PT + + AE+ + + L++I ++G Q+
Sbjct: 304 QRALFTEWLTDAL-DGAVLLLPTTPGLAPLFSASEEDLAEYRHQLMDLTAIAGLAGLPQL 362
Query: 430 AIPIGKYNEHPISISFITYHGGDKFLLD 457
+P+ + P +S + G D L++
Sbjct: 363 HLPVCELEGAPCGLSLVGPKGSDLALIE 390
>gi|359789501|ref|ZP_09292446.1| amidase [Mesorhizobium alhagi CCNWXJ12-2]
gi|359254639|gb|EHK57624.1| amidase [Mesorhizobium alhagi CCNWXJ12-2]
Length = 437
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 149/430 (34%), Positives = 205/430 (47%), Gaps = 29/430 (6%)
Query: 46 RVDFGAFLERFELIPFPQPPPPAARQ-PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHE 104
R AFL+ PQ P A+ PLAGL+ A+KD+FDV GY TG G+P D
Sbjct: 5 RDPLNAFLD------LPQASVPHAKSGPLAGLRLAVKDIFDVAGYKTGCGNPQRYEDAAP 58
Query: 105 AERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAV 164
AE+TA V ++L GA +GKT DE AF + G+N H+ PVNP P + GGSSSGSA
Sbjct: 59 AEKTAPAVQVILDAGAEFVGKTQTDELAFSLMGQNAHFPHPVNPSAPDRVTGGSSSGSAA 118
Query: 165 AVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
AVA L D A G+DT G +R PASFCG++G R +HG +S+ G +P + SLDT G AR+
Sbjct: 119 AVAGGLADIATGSDTGGSIRAPASFCGLIGLRTTHGRISLDGTMPLAPSLDTFGWFARDI 178
Query: 225 SILHRVGHVLLQLNAVEPRRA--RRLIFADDIFQLSKV--PKLKTIHVISKAIESLSGYQ 280
+V V+L + A L D + P + K +
Sbjct: 179 GTYEKVAAVVLGAAPISDAGAAPHPLPVKDGERGAPTLVTPSPRPSRGEGKGEGQFTVLT 238
Query: 281 NP------EHMNVGQYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSL-------QR 327
NP + + +G A+ + + A AT ALS + L Q
Sbjct: 239 NPLRLAALDSLVLGPIEAAEYRRMTAIVAAVI---GEPATAPALSHSIDDLYWCFRKLQA 295
Query: 328 YEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKI 387
YE + +W+ LG V ER + + RN RA L LL D +
Sbjct: 296 YEAWAAHGDWILQRDRGLGPGVRERFEFGSTLDSEVAAAETQRRNAFRAELAALLGQDGV 355
Query: 388 LVIPTV-SDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFI 446
LV+PTV S PLK + + A + +R L L + +SG Q+ +PIG+ + P IS +
Sbjct: 356 LVLPTVPSAAPLKDSPAEDLQA-YRERALRLLCLSGLSGFPQITLPIGEVHGAPFGISLL 414
Query: 447 TYHGGDKFLL 456
G D L+
Sbjct: 415 GPAGSDLALI 424
>gi|410628301|ref|ZP_11339024.1| amidase [Glaciecola mesophila KMM 241]
gi|410152165|dbj|GAC25793.1| amidase [Glaciecola mesophila KMM 241]
Length = 401
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 181/388 (46%), Gaps = 31/388 (7%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A+KD+F +KG T G+PDW H E+T+ V LL GA+ +GKT+ DE A
Sbjct: 33 LNGVSLAVKDLFHIKGIPTTAGNPDWLASHPTPEQTSPAVDALLHAGASLVGKTITDELA 92
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+ + G+N HYGTP N P +PGGSSSGSAVAV LGTDT G +RVPAS+ G+
Sbjct: 93 YSLNGQNIHYGTPFNISAPERLPGGSSSGSAVAVREGSAQVGLGTDTGGSIRVPASYNGL 152
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVE---PRRARRLI 249
G RP+HG +S ++ + S DTVG + R+ S L +V VLL + + P + ++
Sbjct: 153 FGLRPTHGRISCEHMVSLAPSFDTVGWITRDLSTLDKVAQVLLNKDDEQTPYPVKDAKIG 212
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
FA+++ + + +S A + Q + S
Sbjct: 213 FAEEL-----AAQCEYSDALSSAYNKMVKRQ----------------CILSSGLSSDLLI 251
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
+ T + LQ YE + +W+ KP ++ ER T+ + K
Sbjct: 252 QASGTFRI-------LQGYEIWQTHGQWITKQKPTFAPDIQERFEWCATITEKQQQNAKK 304
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
+ E + + L ++ +PT +NT A + ++ + L+ I + G Q+
Sbjct: 305 KQKEFISHIHYLFSQCDVIFLPTTPGAAPLINTPSEQLATYRNKLMNLTCIAGLCGLPQL 364
Query: 430 AIPIGKYNEHPISISFITYHGGDKFLLD 457
IP+ P+ S I DK L++
Sbjct: 365 HIPLAINPHAPMGFSLIGQKNHDKQLIE 392
>gi|358460540|ref|ZP_09170722.1| Amidase [Frankia sp. CN3]
gi|357076239|gb|EHI85716.1| Amidase [Frankia sp. CN3]
Length = 558
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 135/389 (34%), Positives = 183/389 (47%), Gaps = 23/389 (5%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
A + PL GL A+KD+F V G+ G G+P W + A A V LL GA G
Sbjct: 182 ADQGPLRGLTVAVKDLFAVAGHRAGAGNPAWLAEAAPAAEHAPAVAALLAAGADVTGLAQ 241
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
DE A+ ++G N HYGTP NP P IPGGSSSG A AVA LVD LGTDT G VRVPA
Sbjct: 242 TDELAYSLSGTNVHYGTPPNPTAPGVIPGGSSSGPASAVALGLVDVGLGTDTGGSVRVPA 301
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
S+CG+ G RP+HG VS GV+P + S DTVG L R+A+ L RVG VLL
Sbjct: 302 SYCGLFGIRPTHGAVSAAGVVPLAPSFDTVGWLTRDAATLARVGAVLLPPADPALPAPGA 361
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
L+ ADD+ L++ T ++ A+ SL+ + VP++ R
Sbjct: 362 LLVADDLVALAEP---DTAAALAGAVPSLAAAVD--------LPVRRVPAIAAGR----- 405
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
L+ Q +E + WV + LG + R A T + +
Sbjct: 406 -------LRDWFLAFRHGQGFEANQAHGAWVAAHPGVLGPGIAGRFAGAAAVTDEELTTA 458
Query: 368 YKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCC 427
VR ++RA L L +LV+P S P ++ TL L+ ++G
Sbjct: 459 RAVRAQVRATLGAALGTGAVLVVPATSGPAPAIDLAVEAKDRLRAATLTLTCAAGLAGLP 518
Query: 428 QVAIPIGKYNEHPISISFITYHGGDKFLL 456
V +P+ P+ ++ I G D LL
Sbjct: 519 VVVLPLLLVRGRPVGLALIGAPGTDHALL 547
>gi|357023041|ref|ZP_09085256.1| amidase [Mesorhizobium amorphae CCNWGS0123]
gi|355545028|gb|EHH14089.1| amidase [Mesorhizobium amorphae CCNWGS0123]
Length = 399
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 131/398 (32%), Positives = 193/398 (48%), Gaps = 26/398 (6%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAGL+ A+KD++DV GY TG G+P + H A +TA V ++L GA +GKT DE
Sbjct: 26 PLAGLRLAVKDIYDVAGYRTGCGNPRKFAEAHAASQTAEAVQVILDAGARFVGKTQTDEL 85
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
AF + G+N H+ PVNP P + GGSSSGSA AVA L D A+G+DT G +R PASFCG
Sbjct: 86 AFSLMGQNAHFPFPVNPAAPDRVTGGSSSGSAAAVAGGLADIAVGSDTGGSIRAPASFCG 145
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRL-IF 250
++G R +HG +S+ G + + SLDT G A + VG +LL + + R L I
Sbjct: 146 LIGLRTTHGRISLEGAMKLAPSLDTFGWFADDIETYEAVGKLLLGRDPHQHALNRPLSIG 205
Query: 251 ADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPEN 310
D F + + ++A + P ++ Y ++VP
Sbjct: 206 WLDAFVTGPAEAAEYAEMKARAAAV---FGEPAPVD---YSFASVPD------------- 246
Query: 311 GTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKV 370
L LQ YE ++ EW+ + +PRLG V ER +
Sbjct: 247 ------ELYWCFRRLQAYEAWQVHGEWITAGEPRLGPGVDERFSFGRAVDARTAEAETAR 300
Query: 371 RNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVA 430
R R+ L RLL + L++PTV P +N + +R L L + +SG Q+
Sbjct: 301 RLVFRSELARLLGNHGFLLLPTVPGPAPLVNGTAEQLQAYRERALHLLCLSGLSGFPQIT 360
Query: 431 IPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQE 468
+P+G + P +S + G D L+ L D+ ++
Sbjct: 361 LPLGSVDGAPFGLSLVGPSGSDIALIRLGRKLLDAARK 398
>gi|237808703|ref|YP_002893143.1| amidase [Tolumonas auensis DSM 9187]
gi|237500964|gb|ACQ93557.1| Amidase [Tolumonas auensis DSM 9187]
Length = 400
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 132/403 (32%), Positives = 193/403 (47%), Gaps = 29/403 (7%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
A PL+ L+ KD++ V GY TG G+P W H A T+ V+ L+ G IG+
Sbjct: 20 ATEGPLSDLRLVYKDLYHVAGYPTGAGNPTWLNTHEPAAATSPVLLKLMNAGMQIIGRVQ 79
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
DE A+ + G N HYGTPVNP P +PGGSSSGSAVAVA D LGTDT G +RVPA
Sbjct: 80 TDELAYSLNGCNIHYGTPVNPAAPDRLPGGSSSGSAVAVARGDADVGLGTDTGGSIRVPA 139
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
+ G+ G RP+HG +S ++P + DT G L R+A+ L RVG L V+ R
Sbjct: 140 CYNGLFGIRPTHGRLSSEHMVPLAPRFDTPGWLCRDAATLERVGAQLFGATPVKTERV-D 198
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
L++A +F L +P+ ++ + Q +A+ V SL
Sbjct: 199 LLWATSLFDL--LPEDLCTAIVP----------------IKQQLAACVASLHEW------ 234
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
+ A L L++ +LQ E + WV ++ ER A T ++ +
Sbjct: 235 -DFAPARLSELNNTFRTLQGREVARTHSAWVSQHPDAFAADIAERFQWASQLTAEDEALA 293
Query: 368 YKVRNEMRAALQRLLKDDKILVIPTVSD-PPLKLNTKKTYSAEFHDRTLVLSSIGSMSGC 426
+ + +A + L + LVIPT D PL+ + A+F + L L+++ ++G
Sbjct: 294 EETCQQWKAEIIARL-ETACLVIPTTPDLAPLR-SASDADLADFRMKLLGLTALAGLAGL 351
Query: 427 CQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQ 469
QV +P+ K P S I G D LL V D + E+
Sbjct: 352 PQVHLPLVKVAGVPFGFSIIGKPGSDMQLLALVRLFSDVIGEE 394
>gi|319781639|ref|YP_004141115.1| amidase [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317167527|gb|ADV11065.1| Amidase [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 398
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 135/398 (33%), Positives = 193/398 (48%), Gaps = 27/398 (6%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAGL+ A+KD++DV GY TG G+ + H A RTA V ++L GA +GKT DE
Sbjct: 26 PLAGLRLAVKDIYDVAGYRTGCGNLQKFAESHAASRTAPAVQMILDAGARFVGKTQTDEL 85
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
AF + G+N H+ PVNP P + GGSSSGSA AVA +L D A G+DT G +R PASFCG
Sbjct: 86 AFALFGQNAHFSFPVNPAAPDRVTGGSSSGSAAAVAGRLADIATGSDTGGSIRAPASFCG 145
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
++G R +HG +S+ G + + SLDT G A + VG +LL + + R L
Sbjct: 146 LIGLRTTHGRISLDGTMKLAPSLDTFGWFADDIETYETVGKLLLGRDPHQHVLDRPLAL- 204
Query: 252 DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENG 311
D + L P +L+ Y + + + A P+++ S+SP+
Sbjct: 205 DWLDGLVARP-------------ALAEYAGMKGLAGAVFGAPATPAIR----FSSSPDE- 246
Query: 312 TATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVR 371
L LQ E ++ EW+ S + LG V ER D KVR
Sbjct: 247 ------LYWCFRRLQAKEAWAVHGEWITSGERDLGPGVEERFGFG-RAVDDKTAQAEKVR 299
Query: 372 N-EMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVA 430
R L LL D LV+PTV P +++ + +R L L + +SG Q+
Sbjct: 300 RLTFRGELSALLGKDGFLVLPTVPGPAPYVDSTPEQFQAYRERALQLLCLAGLSGFPQIT 359
Query: 431 IPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQE 468
+PIG P +S + G D L+ L D+ ++
Sbjct: 360 LPIGSVAGAPFGLSLLGPSGSDIALIRLGRKLLDAARK 397
>gi|423127971|ref|ZP_17115650.1| hypothetical protein HMPREF9694_04662 [Klebsiella oxytoca 10-5250]
gi|376395010|gb|EHT07660.1| hypothetical protein HMPREF9694_04662 [Klebsiella oxytoca 10-5250]
Length = 394
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 140/405 (34%), Positives = 193/405 (47%), Gaps = 40/405 (9%)
Query: 61 FPQPPPPAARQ---PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLK 117
P PP P A PL+GL FA+KD+FDV GY TG G+P RTA VV LL
Sbjct: 9 MPYPPHPVAHALSGPLSGLTFAVKDLFDVAGYPTGGGNPHLLALSGIKNRTAPVVQTLLD 68
Query: 118 NGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGT 177
NGA IGKT E A+ ++G N HYGTP N P+HIPGGSSSGSA AV+ ++ DFALGT
Sbjct: 69 NGARFIGKTHTSELAYSMSGHNVHYGTPRNGAAPNHIPGGSSSGSASAVSNEVCDFALGT 128
Query: 178 DTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQL 237
DT G VR PAS+CG+ G RP+HG +S+ G P ++DT G AR+ + V L
Sbjct: 129 DTGGSVRTPASYCGLFGLRPTHGRLSLDGCQPLCATMDTCGFFARSPEVFSAVAACL--- 185
Query: 238 NAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPS 297
FAD+ LS V + S+ P + ++ + P
Sbjct: 186 ------------FADERADLSGVRLACHDGLFSRLPLRSQQALQPVRQRLARFFGAVTPL 233
Query: 298 LKGLRAQSTSPENGTATLKALSSVMLS---LQRYEFKTIYEEWVKSAKPRLGYNVFERVL 354
TA L + + L+ +Q YE E ++ +LG +V ER
Sbjct: 234 --------------TAPLPDVDDIYLAFRQIQGYEAWQAQGETIERYGLQLGPDVRERFF 279
Query: 355 EAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSD--PPLKLNTKKTYSAEFHD 412
T+ + R A L D +LV+PTV D P L ++ +
Sbjct: 280 WGKAVTRAQFDAACQQRERFAAWWDAQLG-DAVLVMPTVPDGAPLLTAQAEEIEAVRRLS 338
Query: 413 RTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
L+L S+ M+ QV +P+ + P+ ISF+ G D+ L++
Sbjct: 339 HDLLLISV--MTQRPQVTLPVAQTGGLPLGISFLGPRGSDRLLVE 381
>gi|336117854|ref|YP_004572622.1| amidase [Microlunatus phosphovorus NM-1]
gi|334685634|dbj|BAK35219.1| putative amidase [Microlunatus phosphovorus NM-1]
Length = 534
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/406 (31%), Positives = 188/406 (46%), Gaps = 30/406 (7%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAGL A+KD+F ++GY G G+P W R+ + TA V+ LL+ GA+ G DEF
Sbjct: 146 PLAGLTVAVKDLFAIRGYRIGAGNPTWLRERRREQATAPAVSDLLRGGASLRGIARTDEF 205
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+ I G N HYGTP N +P +PGGSS+G A AVA D L +DT G +RVPAS+ G
Sbjct: 206 AYSIAGANVHYGTPPNGALPGALPGGSSNGPAAAVALGQADVGLASDTAGSIRVPASYQG 265
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
+ G R +HG V G+LP SQ+ DTVG LAR+A L RV +L ++ A
Sbjct: 266 LWGLRTTHGIVPRQGMLPLSQTFDTVGWLARDAETLDRVATWVLITDS----------SA 315
Query: 252 DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENG 311
DD + P + I+ E+L+ + ++ RA +T +G
Sbjct: 316 DDP-EADLTPDAQLPRRIAVPAEALACTEADTRDAFQAWLD---------RAAATDQVDG 365
Query: 312 -----TATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKI 366
L A V ++Q E WV++ LG ++ R+ A T + +
Sbjct: 366 VDIVEVGDLSAYLEVFRTVQSAEAWRNNGAWVEAHPGALGPDIAARLEMASRVTTEQERA 425
Query: 367 LYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGC 426
+ MR + R L D+ ILV+PT P TL ++S+ + G
Sbjct: 426 AQNELSRMRQRI-RALTDEAILVLPTAPGPAPARTADGPTIETVRAATLRMTSLAGIGGL 484
Query: 427 CQVAIPI----GKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQE 468
++ P+ P+ + F+ D LL V + + Q+
Sbjct: 485 PALSAPLLTVPSLLGPAPVGVCFVGPAERDLDLLRWVRAIEAATQD 530
>gi|113867483|ref|YP_725972.1| amidase [Ralstonia eutropha H16]
gi|113526259|emb|CAJ92604.1| Amidase [Ralstonia eutropha H16]
Length = 396
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 145/404 (35%), Positives = 196/404 (48%), Gaps = 34/404 (8%)
Query: 58 LIPFPQ-PPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLL 116
+P+PQ P AA PL GL FA+KD+FDV GY TG G+P TA V LL
Sbjct: 11 FMPYPQIAVPHAASGPLRGLSFAVKDLFDVAGYPTGGGNPHVLARSGIKAATAPAVQRLL 70
Query: 117 KNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALG 176
GA +GKT DE AF + G+N HYG PVN P I GGSSSGSA AV+ L DFALG
Sbjct: 71 DAGAAFVGKTHTDELAFSMNGQNAHYGRPVNGAAPERITGGSSSGSASAVSNGLCDFALG 130
Query: 177 TDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ 236
+DT G VR PAS CG+ G RP+HG +S+ LP S+SLDT G AR+ RV VL
Sbjct: 131 SDTGGSVRAPASHCGLFGIRPTHGRISLERCLPLSESLDTCGFFARDIGTFARVAEVLFG 190
Query: 237 LNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVP 296
+ A RL+FA D+F PE + + +
Sbjct: 191 ADPAPLPAAPRLLFATDLF----------------------AQPTPEARDALAPAVARIE 228
Query: 297 SLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEA 356
+ G A +T + L L +Q +E E ++ LG +V R +
Sbjct: 229 TALGRAAPATVADR---PLSDLWWAFRYVQGWEAWRSDGELIEQHGLELGADVAARFAFS 285
Query: 357 INTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSD-PPLK---LNTKKTYSAEFHD 412
T+ VR + A L RLL D +LV+PT+ D PL+ + + +TY
Sbjct: 286 KAVTRSQFDEASAVRRDFTAHLGRLLGPDGVLVLPTMPDIAPLRAEPIESLETYR-NLAA 344
Query: 413 RTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+TL L+ +SG Q+ +P+ + P+ IS + G D+ L+
Sbjct: 345 QTLCLT---PLSGFPQLNLPLAGRDGAPLGISLLGPAGSDRSLV 385
>gi|337266483|ref|YP_004610538.1| Amidase [Mesorhizobium opportunistum WSM2075]
gi|336026793|gb|AEH86444.1| Amidase [Mesorhizobium opportunistum WSM2075]
Length = 398
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 131/399 (32%), Positives = 190/399 (47%), Gaps = 29/399 (7%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAGL+ A+KD++DV GY +G G+P D A RTA V ++L GA +GKT DE
Sbjct: 26 PLAGLRLAVKDIYDVAGYRSGCGNPRKFADSPAASRTAPAVQVILDAGARFVGKTQTDEL 85
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
AF + G+N H+ PVNP P + GGSSSGSA AVA +L D A G+DT G +R PASFCG
Sbjct: 86 AFALFGQNAHFSFPVNPAAPDRVTGGSSSGSAAAVAGKLADIATGSDTGGSIRAPASFCG 145
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
++G R +HG +S+ G + + S DT G A + VG +LL + R+L
Sbjct: 146 LIGLRTTHGRISLDGTMKLAPSFDTFGWFADDIETYETVGKLLLGRDQHHHHLDRQLALG 205
Query: 252 --DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
D++ A +L+ Y + + + A P++ S+SP+
Sbjct: 206 WLDELV----------------ARPALAEYAGMKRLASAVFGAPATPTMP----FSSSPD 245
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
L LQ E ++ EW+ S + LG V ER + +
Sbjct: 246 E-------LYWCFRRLQAKEAWGVHGEWITSGERDLGPGVEERFGFGRAVDERTAQAEEV 298
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
R R L LL D LV+PTV P +++ + +R L L + +SG Q+
Sbjct: 299 RRLTFRGELGALLGKDGFLVLPTVPGPAPYVDSTPEQFQAYRERALHLLCLAGLSGFPQI 358
Query: 430 AIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQE 468
+PIG P +S + G D L+ L D+ Q+
Sbjct: 359 TLPIGSVAGAPFGLSLLGPSGSDIALIRLGRKLLDAAQK 397
>gi|332306574|ref|YP_004434425.1| Amidase [Glaciecola sp. 4H-3-7+YE-5]
gi|332173903|gb|AEE23157.1| Amidase [Glaciecola sp. 4H-3-7+YE-5]
Length = 411
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/388 (31%), Positives = 185/388 (47%), Gaps = 27/388 (6%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L+G+ A+KD+F +KG T G+PDW H TA V LL+NGA +GKT+ DE A
Sbjct: 40 LSGVTLAVKDLFHIKGLPTTAGNPDWLASHPIPVHTAPAVETLLENGAQLVGKTITDELA 99
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+ + G+N HYGTP N P IPGGSSSGSAVAV LGTDT G +RVPAS+ G+
Sbjct: 100 YSLNGQNIHYGTPFNISAPDRIPGGSSSGSAVAVREGSAQVGLGTDTGGSIRVPASYNGL 159
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G RP+HG +S ++ + S DTVG + R+ +L +V V ++ +
Sbjct: 160 FGLRPTHGRISSEHMVSLAPSFDTVGWITRDLDVLAKVASVFFGDKHIDDASNSQ----- 214
Query: 253 DIFQLSKVPKLKTIHVISKAIESL-SGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENG 311
DI Q SK+ + + + E+L + Y + M +I + GL + S
Sbjct: 215 DIAQNSKIGFAQELAQQCEYSEALTTAYHS---MVEAPFILES-----GLSSDS------ 260
Query: 312 TATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVR 371
L S LQ YE + EW+ P ++ +R A T DN + +
Sbjct: 261 ---LIEASETFRILQGYEIWQTHGEWITQQAPTFAPDIQQRF--AWCATIDNQQRQQALE 315
Query: 372 NEMR--AALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
+ + + + L ++ +PT P ++T A + + + L+ I + G Q+
Sbjct: 316 KQAKFISHINHLFTQCDVIFLPTTPGPAPFIDTPSDVLATYRNTLMKLTCIAGLCGLPQL 375
Query: 430 AIPIGKYNEHPISISFITYHGGDKFLLD 457
+P+ P+ S I DK L++
Sbjct: 376 HVPLPINPHAPMGFSLIGQKNHDKQLIE 403
>gi|410636966|ref|ZP_11347554.1| amidase [Glaciecola lipolytica E3]
gi|410143345|dbj|GAC14759.1| amidase [Glaciecola lipolytica E3]
Length = 395
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 180/388 (46%), Gaps = 28/388 (7%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
A QPL G A+KD+F + G VT G+PDW H +T+ V+ LL G +GKT+
Sbjct: 25 APQPLKGWTLAVKDLFHIDGIVTSAGNPDWADSHPLPTKTSETVSRLLDAGVQYVGKTIT 84
Query: 129 DEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPAS 188
DE A+ + G+N HY VN I GGSSSGSAVAV +L LGTDT G +R+PAS
Sbjct: 85 DELAYSLNGQNIHYPALVNCLDNERICGGSSSGSAVAVGRKLARIGLGTDTGGSIRIPAS 144
Query: 189 FCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRL 248
+ G++G+RPSHG +S+ V+P + S DT G + N +G LL P+ +
Sbjct: 145 YNGLVGFRPSHGLISLKDVVPLAPSFDTAGWITNNIEDAVEIGKFLL------PKSVEKH 198
Query: 249 IFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSP 308
A V++ +ES ++N + + N S + ++
Sbjct: 199 FMAAQPL------------VLNNLVESCE-FKNELYTWLDSKFDKNWQSSLAVTSE---- 241
Query: 309 ENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILY 368
LK S LQ E + +W+K+ +PR ++ +R + ++
Sbjct: 242 -----LLKDASDAFRVLQGREIWQTHGDWIKNTQPRFADDIQQRFQWCSTLSANDELAAI 296
Query: 369 KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQ 428
+ + + + +L +VIPT P + +T AE+ + + + I ++GC Q
Sbjct: 297 EQQQRLIKTVSLILNQQHYIVIPTTPGPAPRRDTSAREIAEYRKKLMQFTCIAGLTGCPQ 356
Query: 429 VAIPIGKYNEHPISISFITYHGGDKFLL 456
+ +P+ + +S I D LL
Sbjct: 357 LHMPLFQQKNTAYGVSIIGPKNSDLELL 384
>gi|410648703|ref|ZP_11359106.1| amidase [Glaciecola agarilytica NO2]
gi|410131712|dbj|GAC07505.1| amidase [Glaciecola agarilytica NO2]
Length = 404
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/389 (31%), Positives = 180/389 (46%), Gaps = 29/389 (7%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L+G+ A+KD+F +KG T G+PDW H TA V LL+NGA +GKT+ DE A
Sbjct: 33 LSGVSLAVKDLFHIKGLPTTAGNPDWLASHPIPVHTAPAVETLLENGARLVGKTITDELA 92
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+ + G+N HYGTP N P IPGGSSSGSAVAV LGTDT G +RVPAS+ G+
Sbjct: 93 YSLNGQNIHYGTPFNISAPDRIPGGSSSGSAVAVREGSAQVGLGTDTGGSIRVPASYNGL 152
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G RP+HG +S ++ + S DTVG + R+ +L +V V ++ +
Sbjct: 153 FGLRPTHGRISSEHMVSLAPSFDTVGWITRDLDVLAKVASVFFGDKHIDDASNSQ----- 207
Query: 253 DIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSL--KGLRAQSTSPEN 310
DI Q SK I A E + E + + P + GL + S
Sbjct: 208 DIAQNSK---------IGFAQELARQCEYSEALTTAYHSMVEDPCILESGLSSDS----- 253
Query: 311 GTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKV 370
L S LQ YE + EW+ P ++ +R A T DN + +
Sbjct: 254 ----LIEASETFRILQGYEIWQTHGEWITQQAPTFAPDIQQRF--AWCATIDNQQRQQAL 307
Query: 371 RNEMR--AALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQ 428
+ + + + L ++ +PT P ++T A + + + L+ I + G Q
Sbjct: 308 EKQAKFISHINHLFTQCDVIFLPTTPGPAPFIDTPSDVLATYRNTLMKLTCIAGLCGLPQ 367
Query: 429 VAIPIGKYNEHPISISFITYHGGDKFLLD 457
+ +P+ P+ S I DK L++
Sbjct: 368 LHVPLPINPHAPMGFSLIGQKNHDKQLIE 396
>gi|421724077|ref|ZP_16163321.1| amidase [Klebsiella oxytoca M5al]
gi|410375134|gb|EKP29771.1| amidase [Klebsiella oxytoca M5al]
Length = 394
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 141/407 (34%), Positives = 196/407 (48%), Gaps = 44/407 (10%)
Query: 61 FPQPPPPAARQ---PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLK 117
P PP P A PL+GL FA+KD+FDV GY TG G+P RTA VV LL
Sbjct: 9 MPYPPHPVAHALSGPLSGLTFAVKDLFDVAGYPTGGGNPHLLALSGIKNRTAPVVQTLLN 68
Query: 118 NGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGT 177
NGA IGKT E A+ ++G N HYGTP N P+HIPGGSSSGSA AV+ ++ DFALGT
Sbjct: 69 NGARFIGKTHTSELAYSMSGHNVHYGTPRNGAAPNHIPGGSSSGSASAVSNEVCDFALGT 128
Query: 178 DTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQL 237
DT G VR PAS+CG+ G RP+HG +S+ G P ++DT G AR+ + V L
Sbjct: 129 DTGGSVRTPASYCGLFGLRPTHGRLSLDGCQPLCATMDTCGFFARSPEVFSAVAACL--- 185
Query: 238 NAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPS 297
FAD+ LS V + S+ P + ++ + P
Sbjct: 186 ------------FADERADLSGVRLACHDGLFSRLPLRSQQALQPVRQRLARFFGAVTPL 233
Query: 298 LKGLRAQSTSPENGTATLKALSSVMLS---LQRYEFKTIYEEWVKSAKPRLGYNVFERVL 354
A L + + L+ +Q YE E ++ +LG +V ER
Sbjct: 234 --------------AAPLPDVDDIYLAFRQIQGYEAWQAQGETIERYGLQLGSDVRERFF 279
Query: 355 --EAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSD--PPLKLNTKKTYSAEF 410
+A+ Q + +VR AA D +LV+PTV D P L ++ +
Sbjct: 280 WGKAVTRAQFDAACQQRVRF---AAWWDAQLGDAVLVMPTVPDGAPLLTAQAEEIEAVRR 336
Query: 411 HDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
L+L S+ M+ QV +P+ + P+ ISF+ G D+ L++
Sbjct: 337 LSHDLLLISV--MTQRPQVTLPVAQTGGLPLGISFLGPRGSDRLLVE 381
>gi|433773331|ref|YP_007303798.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Mesorhizobium australicum WSM2073]
gi|433665346|gb|AGB44422.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Mesorhizobium australicum WSM2073]
Length = 398
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 145/421 (34%), Positives = 201/421 (47%), Gaps = 32/421 (7%)
Query: 49 FGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERT 108
F AFL+ ++ P A PLAGL+ A+KD++DV GY TG G+ + H A RT
Sbjct: 8 FNAFLDLRQM-----PVAHAELGPLAGLRLAVKDIYDVAGYRTGCGNLQKFANGHAASRT 62
Query: 109 AVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAA 168
A V +L GA IGKT DE AF + G+N H+ PVNP P + GGSSSGSA AVA
Sbjct: 63 APAVQAILDAGARFIGKTQTDELAFALFGQNAHFPFPVNPAAPDRVTGGSSSGSAAAVAG 122
Query: 169 QLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILH 228
+L D A G+DT G +R PASFCG++G R +HG +S+ G + + S DT G A +
Sbjct: 123 RLADIATGSDTGGSIRAPASFCGLIGLRTTHGRISLDGTMQLAPSFDTFGWFADDIETYE 182
Query: 229 RVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVG 288
VG +LL + + R L LS + ++ V A +G + VG
Sbjct: 183 TVGKLLLGRDPHQHSLDRPL-------ALSWLDEM----VARPAAAEYAGMK----ALVG 227
Query: 289 QYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYN 348
+ P++ R S+SP+ L LQ E T++ EW+ S + LG
Sbjct: 228 TVFGT--PAMPTTRF-SSSPDE-------LYWCFRRLQAREAWTVHGEWITSGERELGPG 277
Query: 349 VFERVLEAINTTQDNIKILYKVRN-EMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYS 407
V ER D KVR R L LL D LV+PTV P +++
Sbjct: 278 VEERFGFG-RAVDDRTAQTEKVRRLTFRGELSALLGKDGFLVLPTVPGPAPYIDSTPEQF 336
Query: 408 AEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
+ +R L L + +SG Q+ +PIG P +S + G D L+ L D+ Q
Sbjct: 337 QAYRERALHLLCLAGLSGFPQITLPIGSVAGAPFGLSLLGPSGSDIGLIRLGRKLLDAAQ 396
Query: 468 E 468
Sbjct: 397 R 397
>gi|410643240|ref|ZP_11353739.1| amidase [Glaciecola chathamensis S18K6]
gi|410137070|dbj|GAC11926.1| amidase [Glaciecola chathamensis S18K6]
Length = 404
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 121/389 (31%), Positives = 180/389 (46%), Gaps = 29/389 (7%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L+G+ A+KD+F +KG T G+PDW H TA V LL+NGA +GKT+ DE A
Sbjct: 33 LSGVSLAVKDLFHIKGLPTTAGNPDWLASHPIPIHTAPAVETLLENGARLVGKTITDELA 92
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+ + G+N HYGTP N P IPGGSSSGSAVAV LGTDT G +RVPAS+ G+
Sbjct: 93 YSLNGQNIHYGTPFNISAPDRIPGGSSSGSAVAVREGSAQVGLGTDTGGSIRVPASYNGL 152
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G RP+HG +S ++ + S DTVG + R+ +L +V V ++ +
Sbjct: 153 FGLRPTHGRISSEHMVSLAPSFDTVGWITRDLDVLAKVASVFFGDKHIDDASNSQ----- 207
Query: 253 DIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSL--KGLRAQSTSPEN 310
DI Q SK I A E + E + + P + GL + S
Sbjct: 208 DIAQNSK---------IGFAQELARQCEYSEALTTAYHSMVEDPCILESGLSSDS----- 253
Query: 311 GTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKV 370
L S LQ YE + EW+ P ++ +R A T DN + +
Sbjct: 254 ----LIEASETFRILQGYEIWQTHGEWITQQAPTFAPDIQQRF--AWCATIDNQQRQQAL 307
Query: 371 RNEMR--AALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQ 428
+ + + + L ++ +PT P ++T A + + + L+ I + G Q
Sbjct: 308 EKQAKFISHINHLFTQCDVIFLPTTPGPAPFIDTPSDVLATYRNTLMKLTCIAGLCGLPQ 367
Query: 429 VAIPIGKYNEHPISISFITYHGGDKFLLD 457
+ +P+ P+ S I DK L++
Sbjct: 368 LHVPLPINPHAPMGFSLIGQKNHDKQLIE 396
>gi|398829190|ref|ZP_10587390.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Phyllobacterium sp. YR531]
gi|398218048|gb|EJN04565.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Phyllobacterium sp. YR531]
Length = 396
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 127/385 (32%), Positives = 189/385 (49%), Gaps = 25/385 (6%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G A+KD+FDV G TG G+ + + A TA V LL GA IGKT DE
Sbjct: 24 PLKGETLAVKDIFDVAGLPTGCGNRQKQGESPVANETASAVQHLLDAGAKFIGKTQTDEL 83
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
AF + G+N HY PVNP P + GGSSSGSA AVA + A GTDT G +R PASFCG
Sbjct: 84 AFSLIGQNAHYPYPVNPASPDRVTGGSSSGSASAVAGGIASIATGTDTGGSIRAPASFCG 143
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
++G R SHG + + G +P + SLDT G AR+ + +VG++LL +A E + R L
Sbjct: 144 LIGLRTSHGRIPLDGTMPLAPSLDTFGWFARDIDLYEKVGNILLGADASEFKLKRPLF-- 201
Query: 252 DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENG 311
+P L+ H++ E + + + + +++N+ + S
Sbjct: 202 --------IPLLE--HLLVGEAE------DAAYRQMYKLVSNNL-------GHARSARQS 238
Query: 312 TATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVR 371
TA++ L +Q +E + W+ LG V ER A + ++ K R
Sbjct: 239 TASMDDLYLCFRQIQGFEAWATHGAWLSEKDRGLGPGVKERFEYAAAIDLETYQVQTKRR 298
Query: 372 NEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAI 431
+ + LL+DD +LV+PTV T + ++ L L + +SG Q+ +
Sbjct: 299 TLFTSEIADLLQDDGVLVMPTVPGAAPLAATPFDEIQTYREQALHLLMLSGLSGVPQITL 358
Query: 432 PIGKYNEHPISISFITYHGGDKFLL 456
P+G+ + P IS + G D L+
Sbjct: 359 PLGQVHGAPFGISLLGPKGSDMALI 383
>gi|331699129|ref|YP_004335368.1| amidase [Pseudonocardia dioxanivorans CB1190]
gi|326953818|gb|AEA27515.1| Amidase [Pseudonocardia dioxanivorans CB1190]
Length = 547
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 127/393 (32%), Positives = 181/393 (46%), Gaps = 30/393 (7%)
Query: 67 PAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKT 126
PA L GL A+KDV V G G G+P W D R+A V LL GA G
Sbjct: 165 PAGSGVLDGLTVAVKDVLAVAGERMGLGNPTWLADQEPEARSAPAVQQLLAAGAAITGIA 224
Query: 127 VLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
DEFA+ + G+N+HYGTP NP P + GGS+SG A AVA VD LGTDT G +RVP
Sbjct: 225 RTDEFAYSLAGQNRHYGTPPNPAAPGCLSGGSTSGPAAAVALGQVDIGLGTDTAGSLRVP 284
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRAR 246
AS+ G++G R SHG +S+ GV P + S DTVG L R+ + RV VLL
Sbjct: 285 ASYQGLVGVRTSHGAISVEGVHPLAPSFDTVGWLTRDVDVAARVADVLLA---------- 334
Query: 247 RLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQST 306
+ + P +T I +L G+ N E + + + + L G +
Sbjct: 335 --------HRPNVAPGSRT-----AVIPALRGWINAE---LDTRVTAALAELTGAGVLAP 378
Query: 307 SPENGTA--TLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNI 364
+ A + A + LQ +E W + G +V R A T D
Sbjct: 379 VEDADLAHDEITAWARAFRVLQAFEVWQGQGGWARDHPGAFGPDVGGRFAFAATVTADQA 438
Query: 365 KILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMS 424
+ + R L+RLL D +LV+P S P L+ K + T+ L+ + S++
Sbjct: 439 DTARETVRDARERLRRLLA-DTVLVLPASSGPAPSLHAGKDIVEDERTATVRLTQLASLA 497
Query: 425 GCCQVAIPIGKYNE-HPISISFITYHGGDKFLL 456
G VA+P+ ++ P+ + + D+ LL
Sbjct: 498 GAPAVALPVLWMSDGRPVGLCLVGAPDTDRALL 530
>gi|402487109|ref|ZP_10833934.1| amidase [Rhizobium sp. CCGE 510]
gi|401813939|gb|EJT06276.1| amidase [Rhizobium sp. CCGE 510]
Length = 378
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 191/393 (48%), Gaps = 44/393 (11%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL+ L+ A+KD+FDV GY T G+P TA +V LL GA +GKT DE
Sbjct: 15 PLSSLRLAVKDLFDVAGYPTAAGNPAVLAASGIKTATAPLVQTLLDTGACFVGKTNTDEL 74
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+ + G N H+G P+NP+ P+ IPGGSSSGSAVAVAA L D LGTDT G +R+PA+ G
Sbjct: 75 AYSLIGGNIHFGMPINPRDPTLIPGGSSSGSAVAVAAGLADLGLGTDTSGSIRLPAAING 134
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN----ASILHRVGHVLLQLNAVEPRRARR 247
++G+RP+HG++ + P + S D G + R+ A+++ VG R
Sbjct: 135 LIGWRPTHGSLDNRALRPLAPSFDVPGFMTRSLEPMAAVMSAVGMPAAH------DRPSS 188
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
++ +DIF+ I AI + IAS S +R +
Sbjct: 189 ILIPEDIFE-----------TIDGAIAD-------------EMIASLRSSAMPIRKIDSI 224
Query: 308 PENGTATLKALSSVMLSLQRYEF---KTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNI 364
A L + + LQR + KT++E + P ++ R+ + +
Sbjct: 225 ASFSLADLAV--AFITILQREAWTSNKTLFERSPDAIAP----DIAARLRSGSRLDDEEV 278
Query: 365 KILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMS 424
+ Y++R + A + RLL ++ ++ +PT++ P + + A F + L + +S
Sbjct: 279 RAAYRIRKLLSAEIDRLLCENVVVALPTLAMSPPTRDAQPESFAAFRSACIKLLCLSGLS 338
Query: 425 GCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
GC Q+A P + +S+S + D+ L++
Sbjct: 339 GCPQLAFPAASCAGN-VSLSLLGAQSTDRMLMN 370
>gi|410617704|ref|ZP_11328669.1| amidase [Glaciecola polaris LMG 21857]
gi|410162835|dbj|GAC32807.1| amidase [Glaciecola polaris LMG 21857]
Length = 404
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 122/390 (31%), Positives = 180/390 (46%), Gaps = 33/390 (8%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL+G+ A+KD+F +KG T G+PDW H AE T+ VV LL+ GA +GKT+ DE
Sbjct: 32 PLSGMTLAVKDLFHIKGLPTTAGNPDWLASHPIAEHTSPVVDKLLQQGAALVGKTITDEL 91
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+ + G+N HYGTP N P +PGGSSSGSAVAV LGTDT G +RVPAS+ G
Sbjct: 92 AYSLNGQNIHYGTPFNVSSPERLPGGSSSGSAVAVREGSAVIGLGTDTGGSIRVPASYNG 151
Query: 192 ILGYRPSHGTVS---MIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRL 248
+ G RP+HG +S M+G+ P S DTVG + R+ L V VL
Sbjct: 152 LFGLRPTHGRISCEHMVGLAP---SFDTVGWMTRDLDSLCAVADVL-------------- 194
Query: 249 IFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSP 308
F D + +P ++ + K SLS PE M +Y + + +
Sbjct: 195 -FTDSFS--NGLPNIQ----LKKPRISLS----PELMAQCEYSQVLDAAYHAMVNEPCPL 243
Query: 309 ENGTAT--LKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKI 366
+G + L S LQ YE + +W+ +P+ ++ +R +
Sbjct: 244 TSGLSDTLLSQASETFRILQGYEIWQTHGQWITEHQPKFAVDIQQRFTWCATINLRQYQQ 303
Query: 367 LYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGC 426
+ A + L ++ +PT P LNT + + + L+ I + G
Sbjct: 304 ALVQQQIFIAHINDLFTQCDMIFLPTTPGPAPFLNTPGDELTTYRNTLMRLTCIAGLCGL 363
Query: 427 CQVAIPIGKYNEHPISISFITYHGGDKFLL 456
Q+ +P+ P+ S I DK L+
Sbjct: 364 PQLHVPLAINPHAPMGFSLIGQKNHDKQLI 393
>gi|402844241|ref|ZP_10892608.1| amidase family protein [Klebsiella sp. OBRC7]
gi|402275145|gb|EJU24306.1| amidase family protein [Klebsiella sp. OBRC7]
Length = 394
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 140/405 (34%), Positives = 199/405 (49%), Gaps = 40/405 (9%)
Query: 61 FPQPPPPAARQ---PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLK 117
P PP P A PL+GL FA+KD+FDV GY TG G+P RTA VV LL
Sbjct: 9 MPYPPHPVAHALSGPLSGLTFAVKDLFDVAGYPTGGGNPHLLALSGIKNRTAPVVQKLLD 68
Query: 118 NGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGT 177
NGA IGKT E A+ ++G N HYGTP N P+HIPGGSSSGSA AV+ ++ DFALG+
Sbjct: 69 NGARFIGKTHTSELAYSMSGHNVHYGTPRNGAAPNHIPGGSSSGSASAVSNEVCDFALGS 128
Query: 178 DTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQL 237
DT G VR PAS+CG+ G RP+HG +S+ G P ++DT G AR+ + V L
Sbjct: 129 DTGGSVRTPASYCGLFGLRPTHGRLSLDGCQPLCATMDTCGFFARSPEVFSTVAACLFDD 188
Query: 238 NAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPS 297
+ RL + +F S++P L++ + + L+ + P
Sbjct: 189 ERAD-ITGVRLASHEGLF--SRLP-LRSQQALLPVRQRLARFFGP--------------- 229
Query: 298 LKGLRAQSTSPENGTATLKALSSVMLS---LQRYEFKTIYEEWVKSAKPRLGYNVFERVL 354
AQ +P L + L+ +Q YE E ++ +LG +V ER
Sbjct: 230 ----LAQLDAP------LPDADDIYLAFRQIQGYEAWQAQGETIERYDLQLGPDVRERFF 279
Query: 355 EAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSD--PPLKLNTKKTYSAEFHD 412
T+ ++R A LL D +LV+PTV D P L ++ +
Sbjct: 280 WGKAVTRAQFDAACQLRERFTAWWDALLG-DAVLVMPTVPDGAPLLTAQAEEIEAVRRLS 338
Query: 413 RTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
L+L S+ M+ QV +P+ + P+ ISF+ G D+ L++
Sbjct: 339 HDLLLISV--MTQRPQVTLPVAQTGGLPLGISFLGPRGSDRLLVE 381
>gi|239813857|ref|YP_002942767.1| amidase [Variovorax paradoxus S110]
gi|239800434|gb|ACS17501.1| Amidase [Variovorax paradoxus S110]
Length = 393
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 137/408 (33%), Positives = 193/408 (47%), Gaps = 42/408 (10%)
Query: 58 LIPFPQPP-PPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLL 116
+P+P P P A PLA L+FA KD+FDV GY TG GSP RTA V LL
Sbjct: 10 FVPYPDAPVPHAPTGPLADLRFAAKDLFDVAGYPTGGGSPIVLAMSGIKTRTAPTVQKLL 69
Query: 117 KNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALG 176
GA GKTV DE AF + G N H+G P+N I GGSSSGSA AV++ L DFALG
Sbjct: 70 DAGARFAGKTVTDELAFSMNGNNAHFGAPINGAAKDRITGGSSSGSASAVSSGLCDFALG 129
Query: 177 TDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ 236
TDT G VR PA+ CG+ G RP+HG VS+ G L + SLDT G AR+ RV VLL
Sbjct: 130 TDTGGSVRAPANHCGLYGLRPTHGRVSLEGALDLAPSLDTCGWFARDIGTFARVADVLLD 189
Query: 237 LN-AVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNV 295
+ A P R RL+ +D++ L+ + + + + G
Sbjct: 190 ADTAALPARV-RLLRPEDVWSLAVPAAADALADAAARAQRVLG----------------- 231
Query: 296 PSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSA------KPRLGYNV 349
+ AL S + + +E W+ P LG V
Sbjct: 232 --------------DAAGIEVALDSFDAMYWNFRYVQSHEAWLTDGPLIERYAPPLGPGV 277
Query: 350 FERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSD-PPLKLNTKKTYSA 408
ER + T I R R+ L +LL D +L++PT+ D PL+ +
Sbjct: 278 AERFAWSRGVTDAQIAAGRAFRTSFRSHLAKLLGSDGVLLMPTMPDIAPLRSEGEAGLE- 336
Query: 409 EFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
++ +R + + I ++G Q+++P+ + + P+ IS + G D+ L+
Sbjct: 337 DYRNRAIRMLCIAGLAGFPQLSMPLAQRHGAPLGISLLGPAGSDRSLI 384
>gi|423119157|ref|ZP_17106841.1| hypothetical protein HMPREF9690_01163 [Klebsiella oxytoca 10-5246]
gi|376399803|gb|EHT12417.1| hypothetical protein HMPREF9690_01163 [Klebsiella oxytoca 10-5246]
Length = 394
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 141/407 (34%), Positives = 200/407 (49%), Gaps = 40/407 (9%)
Query: 58 LIPFP-QPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLL 116
+P+P QP P A PL+G+ FA+KD+FDV GY TG G+P RTA VV LL
Sbjct: 8 FMPYPPQPVPHALSGPLSGMTFAVKDLFDVAGYPTGGGNPHLLALSGIKRRTAPVVQRLL 67
Query: 117 KNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALG 176
NGA IGKT E A+ ++G N HYGTP N P+HIPGGSSSGSA AV+ + DFALG
Sbjct: 68 DNGARFIGKTHTSELAYSMSGHNVHYGTPRNGAAPNHIPGGSSSGSASAVSNGVCDFALG 127
Query: 177 TDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ 236
TDT G VR PAS+CG+ G RP+HG +S+ G P ++DT G A+ + V L
Sbjct: 128 TDTGGSVRTPASYCGLFGLRPTHGRISLDGCQPLCATMDTCGFFAQTPEVFRAVADCL-- 185
Query: 237 LNAVEPRRAR-RLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNV 295
L+A P A L D +F + + + + + +E + G P +N
Sbjct: 186 LDAKPPAIAGVALACHDALFSCLPLRSQQALLPVRQRLERVFGTFTP--LN--------- 234
Query: 296 PSLKGLRAQSTSPENGTATLKALSSVMLS---LQRYEFKTIYEEWVKSAKPRLGYNVFER 352
A+L + + L+ +Q +E E ++ +LG +V ER
Sbjct: 235 -----------------ASLPDIDEIYLAFRQIQGFEAWQAQGETIERYGLQLGPDVRER 277
Query: 353 VLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSD--PPLKLNTKKTYSAEF 410
L T + + R LL D ILV+PTV D P L ++ +
Sbjct: 278 FLWGKAVTPAQYEAACQRREHFTRWWDALLG-DAILVLPTVPDGAPLLTAQAEEIETTRR 336
Query: 411 HDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
L+L S+ M+ QV +P+ + P+ ISF+ G D+ L++
Sbjct: 337 LSHDLLLISV--MTRRPQVTLPVAQAGGLPLGISFLGPCGSDRLLVE 381
>gi|359449031|ref|ZP_09238535.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Pseudoalteromonas sp. BSi20480]
gi|358045168|dbj|GAA74784.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Pseudoalteromonas sp. BSi20480]
Length = 402
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 182/402 (45%), Gaps = 34/402 (8%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L+ + A+KDVF VK G+P W + H A+RTA V L+ G G T DE A
Sbjct: 29 LSTKRLAVKDVFAVKKQKNSAGNPCWFKTHPLAQRTASSVNKLMDAGCIFKGFTHTDELA 88
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+ + G N HYG NP++ H GGSS GSA AVA L D LGTDT G +R+PAS+CG+
Sbjct: 89 YSLEGNNTHYGAAQNPKIKGHACGGSSMGSAAAVAGNLADIGLGTDTGGSIRIPASYCGL 148
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G RPSH + G++P + DT+G L ++A +L +VG+VLL A+ L+ +
Sbjct: 149 FGIRPSHNLIEKDGLIPLAPPFDTIGWLTQSAELLEKVGNVLLSNRAI--NSVNTLVICE 206
Query: 253 DIFQL-SKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENG 311
+F+L S + ++ K ++N E N+
Sbjct: 207 PLFELVSPALQAPLKQLLKKTKPFFKHHKNFELPNI------------------------ 242
Query: 312 TATLKALSSVMLSLQRYEFKTIYEEWVK--SAKPRLGYNVFERVLEAINTTQDNIKILYK 369
+ L L+ LQ ++++W++ P+ + R A+ T K
Sbjct: 243 -SLLSELADSFRILQGRAIAKVHKDWLQLPEHPPQFAPAIAARFKMALALTAQEEKEALN 301
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
V+ + + + + L L +PT KL ++ + + LS+I +S QV
Sbjct: 302 VQTQWQTLIAKNLNSTSCLFLPTTPTTAPKLGAD---TSALRMQIITLSAIAGLSRSAQV 358
Query: 430 AIPIGKY-NEHPISISFITYHGGDKFLLDTVLDLYDSLQEQV 470
+P+ N HP S + H DK LL L +++
Sbjct: 359 HLPLANLANGHPYGFSLMMSHNNDKSLLACATQLAAYFKQET 400
>gi|329902981|ref|ZP_08273325.1| Amidase [Oxalobacteraceae bacterium IMCC9480]
gi|327548533|gb|EGF33197.1| Amidase [Oxalobacteraceae bacterium IMCC9480]
Length = 562
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 131/411 (31%), Positives = 190/411 (46%), Gaps = 49/411 (11%)
Query: 58 LIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLK 117
IP+P P A PL+GL FA+KD+FDV GY TG G+P +A VV L +
Sbjct: 180 FIPYPDAPVAAGTGPLSGLTFAVKDIFDVAGYPTGCGNPHMLALSGIKPASASVVRTLAE 239
Query: 118 NGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGT 177
GA+ +GKT DE AF + G+N H+GTP N P IPGGSSSGSA AV+ L D ALGT
Sbjct: 240 AGASFVGKTCTDELAFSMNGKNAHFGTPRNGGAPDRIPGGSSSGSASAVSNGLADIALGT 299
Query: 178 DTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQL 237
DT G VR PAS CG++G RP+H VS+ G + + DT G R+ RVG VLL
Sbjct: 300 DTGGSVRAPASHCGLVGLRPTHARVSLQGAMDLAPDFDTCGWFTRDIDTFARVGDVLL-- 357
Query: 238 NAVEPRRARRLIFADDIFQLSKVPKL------------KTIHVISKAIESLSGYQNPEHM 285
DD L P++ + V + A+E LS
Sbjct: 358 -------------GDDTCALPDAPQVLLAVDVLDLLSPRVQQVFADALERLS-------- 396
Query: 286 NVGQYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRL 345
P L L +T+ + AL +Q Y+ + ++ +L
Sbjct: 397 ----------PVLGTLHEVTTA----APSFDALYWAFRHIQGYQAWQQHGACIEQYGLQL 442
Query: 346 GYNVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKT 405
G V +R + T + +R A LL +DK++V+P++ D L +T
Sbjct: 443 GPGVADRFSWSRTVTAAQMLEYSAIRATFAAHFAALLGNDKVMVLPSMPDIAPLLTDSET 502
Query: 406 YSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+ ++ + + + +SG Q+++P+ + P S I G D+ L+
Sbjct: 503 ALENYRNQAIRMLCLSGLSGLPQISLPLMTIDGAPFGFSVIGPAGSDQSLI 553
>gi|88809608|ref|ZP_01125115.1| amidase family protein [Synechococcus sp. WH 7805]
gi|88786358|gb|EAR17518.1| amidase family protein [Synechococcus sp. WH 7805]
Length = 400
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 134/398 (33%), Positives = 205/398 (51%), Gaps = 33/398 (8%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R PL G FA KD+FD+KG G G+P W++ + A V LL GA C G T +D
Sbjct: 18 RGPLQGHTFAAKDLFDLKGERRGCGNPHWRKRQSPSLSNATAVQQLLDAGAICTGSTTMD 77
Query: 130 EFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
EFAFG++GE+ G+P N P I GGSSSGSA AVA VD ALGTDT G +RVPAS+
Sbjct: 78 EFAFGLSGESPWTGSPPNSANPGCITGGSSSGSAAAVARGDVDLALGTDTGGSIRVPASW 137
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
CG+LG+RPSHG VS+ G+ P + SLDT GL +R+ +L VLL N + R+
Sbjct: 138 CGLLGWRPSHGAVSVQGLQPLAPSLDTTGLFSRDPQVLLAAAEVLLSSN-----KQRQSA 192
Query: 250 FADDIFQLSKVPKLKTI--HVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
A +L +P+L T H + A+ ++ E ++ Q I + +L +
Sbjct: 193 EAPAPTRLYWIPELWTDLEHPVRSAL-----IKSSEQLS--QTIHCEIEALPLATFGLKN 245
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPR---LGYNVFERVLEAI-NTTQDN 363
P+ L ++ ++Q E + +A P LG V ER L + N ++
Sbjct: 246 PQQ-------LQNLFQTIQWDEIAATF-----AALPNDLPLG-PVLERNLAMVRNRSKGA 292
Query: 364 IKILYKVRNEMRAALQRLLKDDKILVIPTV--SDPPLKLNTKKTYSAEFHDRTLVLSSIG 421
+ + + R ++R L +L D +L P + P + + + + ++L+++
Sbjct: 293 QEQVIQHRQQVRDTLATVLGDHGLLAQPITPCTAPAIGSFSLDRGAGSLVGQLILLNALA 352
Query: 422 SMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTV 459
+SG +++IP G + P+ + I G D+ LL T+
Sbjct: 353 GLSGAPELSIPTGGMDNKPLGLGLIASPGRDRLLLQTL 390
>gi|326402417|ref|YP_004282498.1| putative amidase [Acidiphilium multivorum AIU301]
gi|325049278|dbj|BAJ79616.1| putative amidase [Acidiphilium multivorum AIU301]
Length = 389
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 176/382 (46%), Gaps = 38/382 (9%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAGL +KD+FD+ G VT FG+PDW R A A +V+ LL+ GA GKT E
Sbjct: 28 PLAGLDVVVKDLFDIAGEVTAFGNPDWGRHFGPALSHAWIVSQLLEAGARVTGKTTTVEL 87
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
AFG+ G N HYGTP+NP P +PGGSSSGS VA+ +G+DT G VR+PAS+CG
Sbjct: 88 AFGLEGRNTHYGTPLNPAAPDRLPGGSSSGSVAMVASGRAHVGVGSDTGGSVRIPASYCG 147
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
+ G RP+ G +S+ G P + S DT G R+ A
Sbjct: 148 LYGLRPTQGLLSLAGAAPLAPSFDTPGWFTRD---------------------------A 180
Query: 252 DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS---P 308
+ + ++ + + ++ + + + N + +A+ P+L L + P
Sbjct: 181 ETMLRVGEALLPPAPPLAAQFLMIPAAFANADP----DVVAALEPALARLGPMGEADPVP 236
Query: 309 ENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILY 368
E L + + +++ E ++++ KP L R+ T +
Sbjct: 237 EG----LDRMLAWQNAVRGRETWLTLGGFIETVKPLLDPVTAGRIAATRGFTAEAAAEGR 292
Query: 369 KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQ 428
R A + LL +LVIPT P + ++ + RTL + I + +G +
Sbjct: 293 VARRAHTARMHALLAGGAVLVIPTSPCPAPPVAAEQAVYEDVRTRTLRVGIIAAFAGLPE 352
Query: 429 VAIPIGKYNEHPISISFITYHG 450
+ IP+GK N P+ +S I G
Sbjct: 353 LTIPVGKVNGAPVGLSLIAGPG 374
>gi|339325639|ref|YP_004685332.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Cupriavidus necator
N-1]
gi|338165796|gb|AEI76851.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Cupriavidus necator
N-1]
Length = 396
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 143/404 (35%), Positives = 194/404 (48%), Gaps = 34/404 (8%)
Query: 58 LIPFPQPP-PPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLL 116
+P+PQ P AA PL GL FA+KD+FDV GY TG G+P TA V LL
Sbjct: 11 FMPYPQVAVPHAASGPLQGLSFAVKDLFDVAGYPTGGGNPHVLARSGIKAATAPAVQRLL 70
Query: 117 KNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALG 176
GA +GKT DE AF + G+N HYG PVN P I GGSSSGSA AV+ L DFALG
Sbjct: 71 DAGAAFVGKTHTDELAFSMNGQNAHYGRPVNGAAPDRITGGSSSGSASAVSNGLCDFALG 130
Query: 177 TDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ 236
+DT G VR PAS CG+ G RP+HG +S+ LP S+SLDT G A + RV VL
Sbjct: 131 SDTGGSVRAPASHCGLFGIRPTHGRISLERCLPLSESLDTCGFFASDIGTFARVAEVLFG 190
Query: 237 LNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVP 296
+ A RL+ A D+F G PE + +
Sbjct: 191 ADPAPLPAAPRLLVATDLF----------------------GQPTPEARGALAPAVARIE 228
Query: 297 SLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEA 356
+ G A T + L L +Q +E E ++ LG +V R +
Sbjct: 229 AALGRAAPVTVADR---PLSELWWAFRYVQGWEAWHSDGELIEQHGLELGADVAARFAFS 285
Query: 357 INTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSD-PPLK---LNTKKTYSAEFHD 412
T+ VR + A + RLL D +LV+PT+ D PL+ + + +TY
Sbjct: 286 KAVTRSQFDEASAVRRDFTAHVGRLLGQDGVLVLPTMPDIAPLRAEPVESLETYR-NLAS 344
Query: 413 RTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+TL L+ +SG Q+ +P+ + + P+ IS + G D+ L+
Sbjct: 345 QTLCLT---PLSGFPQLNLPLARRDGAPLGISLLGPAGSDRSLV 385
>gi|359442241|ref|ZP_09232111.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Pseudoalteromonas sp. BSi20429]
gi|358035852|dbj|GAA68360.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Pseudoalteromonas sp. BSi20429]
Length = 400
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/393 (31%), Positives = 187/393 (47%), Gaps = 32/393 (8%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LA + A+KDVF VKG G+P W + A+ TA V L+ G IG T DE A
Sbjct: 27 LANNRLAVKDVFAVKGERNSAGNPHWFKTAKPAQNTASSVNKLMTAGCNFIGFTHTDELA 86
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+ + G N HYG NP++ H GGSS GSA AVAA L D LGTDT G +R+PAS+CG+
Sbjct: 87 YSLEGNNIHYGAAQNPKLKGHACGGSSMGSAAAVAANLADIGLGTDTGGSIRIPASYCGL 146
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G RPSH + G++P + S DT+G L ++A +L+ VG+VLL + + L+ +
Sbjct: 147 YGIRPSHNVIEKEGLIPLAPSFDTIGWLTQSAELLNDVGNVLLPNQVI--NKVNTLVICE 204
Query: 253 DIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGT 312
+F+L P L+ + K +E Y N +I +P +
Sbjct: 205 ALFELVD-PSLQA--PLGKLLEKTKPYFN-------HHIDFKLPK--------------S 240
Query: 313 ATLKALSSVMLSLQRYEFKTIYEEWVK--SAKPRLGYNVFERVLEAINTTQDNIKILYKV 370
+ L L+ LQ + +W++ + R A+ T+ + K+
Sbjct: 241 SLLSELADTFRILQGRAIAKTHRDWLELPDQLSHFAPAIAARFKMALALTEQEEQEALKI 300
Query: 371 RNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVA 430
++E + + + L L +PT KL ++ + + LS+I +SG QV
Sbjct: 301 QHEWQTIVAKNLNKHSCLFLPTTPTTAPKLGAD---TSALRMQIITLSAIAGLSGSAQVH 357
Query: 431 IPIGKY-NEHPISISFITYHGGDKFLLDTVLDL 462
+P+ N+HP S + HG DK LL V L
Sbjct: 358 LPLADLTNDHPYGFSLMMTHGNDKSLLACVKHL 390
>gi|359433203|ref|ZP_09223544.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Pseudoalteromonas sp. BSi20652]
gi|357920164|dbj|GAA59793.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Pseudoalteromonas sp. BSi20652]
Length = 406
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 120/389 (30%), Positives = 183/389 (47%), Gaps = 32/389 (8%)
Query: 77 KFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGIT 136
+ A+KDVF +K + G+P W + H A++TA V+ L+ G G T DE A+ +
Sbjct: 37 RLAVKDVFAIKDHKNSAGNPHWFKTHPPAQKTASSVSKLMDAGCIFTGYTHTDELAYSLE 96
Query: 137 GENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYR 196
G N HYG NP++ H GGSS GSA AVAA L D LGTDT G +R+PAS+CG+ G R
Sbjct: 97 GNNIHYGAAQNPKLKGHACGGSSMGSAAAVAANLADIGLGTDTGGSIRIPASYCGLYGIR 156
Query: 197 PSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIFQ 256
PSH + G++P + DT+G L +NA +L VG+VLL A+ L+ + +F+
Sbjct: 157 PSHNVIEKDGLIPLAPPFDTIGWLTQNAELLSDVGNVLLPNQAI--NNVNTLVICEPLFE 214
Query: 257 LSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTATLK 316
L S Q P + Q + P+ K + ++ L
Sbjct: 215 LVD-----------------SALQAP----LKQLLEKTKPNFKHHKEFELP---NSSLLN 250
Query: 317 ALSSVMLSLQRYEFKTIYEEWVK--SAKPRLGYNVFERVLEAINTTQDNIKILYKVRNEM 374
L+ LQ +++W++ P+ + R A+ T + KV+ +
Sbjct: 251 ELADSFRVLQGRAIAKTHKDWLQLPGQLPQFAPAIAARFNMALALTDQEEQEALKVQTQW 310
Query: 375 RAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIG 434
+ + + L + L +PT KL ++ + + LS+I SG QV +P+
Sbjct: 311 QTLIAKNLNTNSCLFLPTTPTTAPKLGAD---TSALRMQIITLSAIAGFSGSAQVHLPLA 367
Query: 435 KY-NEHPISISFITYHGGDKFLLDTVLDL 462
N+HP S + HG DK LL V L
Sbjct: 368 DLANDHPYGFSLMMSHGNDKSLLACVKHL 396
>gi|392538302|ref|ZP_10285439.1| amidase [Pseudoalteromonas marina mano4]
Length = 402
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 117/401 (29%), Positives = 184/401 (45%), Gaps = 32/401 (7%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L+ ++ A+KDVF VKG G+P W + A++TA V L+ G G T DE A
Sbjct: 29 LSTMRLAVKDVFAVKGERNSAGNPSWFKAAKPAQQTASSVNKLMDTGCIFKGFTHTDELA 88
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+ + G N HYG NP++ H GGSS GSA AVA L D LGTDT G +R+PAS+CG+
Sbjct: 89 YSLEGNNTHYGAAQNPKIKGHACGGSSMGSAAAVAGNLADIGLGTDTGGSIRIPASYCGL 148
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G RPSH + G++P + DT+G L ++A +L +VG+VLL A+ L+ +
Sbjct: 149 FGIRPSHNVIEKDGLIPLAPPFDTIGWLTQSAELLEKVGNVLLPNQAI--NSVNTLVICE 206
Query: 253 DIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGT 312
+F+L P L+ ++ L P + ++ N+
Sbjct: 207 PLFELVS-PALQA------PLKQLLKKTKPFFKHHKEFELPNI----------------- 242
Query: 313 ATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYN--VFERVLEAINTTQDNIKILYKV 370
+ L L+ LQ +++W++ +P + + R A+ T K V
Sbjct: 243 SLLSELADSFRILQGRAIAKAHKDWLQLPEPPPQFTPAIAARFKMALALTAQEEKEALNV 302
Query: 371 RNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVA 430
+ + + + + L L +PT KL ++ + + LS+I +S QV
Sbjct: 303 QIQWQTLIAKNLNSTSCLFLPTTPTTAPKLGAD---TSALRMQIITLSAIAGLSRSAQVH 359
Query: 431 IPIGKY-NEHPISISFITYHGGDKFLLDTVLDLYDSLQEQV 470
+PI N HP S + H DK LL L +++
Sbjct: 360 LPIANLANGHPYGFSLMMSHNNDKSLLACATQLAAYFKQET 400
>gi|407974607|ref|ZP_11155515.1| amidase [Nitratireductor indicus C115]
gi|407429690|gb|EKF42366.1| amidase [Nitratireductor indicus C115]
Length = 392
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 134/418 (32%), Positives = 196/418 (46%), Gaps = 38/418 (9%)
Query: 43 LNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDH 102
+ R AFL+ +E +P +A PLAG +KD+FDV GY T G P ++
Sbjct: 1 MTTRDALNAFLD-YEDVPVAN----SADGPLAGTTLGVKDIFDVAGYPTVGGQPSRLKEF 55
Query: 103 HEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGS 162
A TA V +LL GA IGKT DE + + G N HY PVN P + GGSSSGS
Sbjct: 56 PPAGETASAVQILLDAGARFIGKTQTDELTYSMMGMNAHYPAPVNRAAPQRVTGGSSSGS 115
Query: 163 AVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLAR 222
A AVA L D A+G+DT G +R PASFCG++G R +HG + + G +P + S DT G AR
Sbjct: 116 AAAVAGGLADIAVGSDTNGSIRAPASFCGLIGLRTTHGRIPLQGAMPLAPSFDTFGWFAR 175
Query: 223 NASILHRVGHVLLQLNAVEPRRARRLIFAD-DIFQLSKVPKLKTIHVISKAIESLSGYQN 281
+A+ +VG +LL + E R + A+ + + + ++ K + +
Sbjct: 176 DAATYAKVGELLLGEDPHEAPLTRPVRIAELEACLFGEAERSVYAGMLGKVLHQFE--RQ 233
Query: 282 PEHMNVGQYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSA 341
P + A +PE TA + LQ YE + +++ A
Sbjct: 234 PAFL-----------------ALPLAPERLTAAFR-------ELQAYEAWQTHGDFITRA 269
Query: 342 KPRLGYNVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLN 401
+P+LG V ER A + + R L DD +L++PT P
Sbjct: 270 EPKLGPGVKERFEAASRIDRSAFDMARGTRANFIQDFAALFDDDMVLIMPTQ---PTAAP 326
Query: 402 TKKTYSAE---FHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
K +AE + T LS++ M G Q+ IP+G+ +E P IS + G D+ L+
Sbjct: 327 MKSATAAELDSYRSLTAPLSALAGMLGWPQITIPLGRVHEAPFGISLLAPAGSDRQLI 384
>gi|423101800|ref|ZP_17089502.1| hypothetical protein HMPREF9686_00406 [Klebsiella oxytoca 10-5242]
gi|376390626|gb|EHT03309.1| hypothetical protein HMPREF9686_00406 [Klebsiella oxytoca 10-5242]
Length = 394
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 138/402 (34%), Positives = 196/402 (48%), Gaps = 34/402 (8%)
Query: 61 FPQPPPPAARQ---PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLK 117
P PP P A PL+GL FA+KD+FDV GY TG G+P RTA VV LL
Sbjct: 9 MPYPPHPVAHALSGPLSGLTFAVKDLFDVAGYPTGGGNPHLLALSGVKTRTAPVVQKLLD 68
Query: 118 NGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGT 177
NGA IGKT E A+ ++G N HYGTP N P+HIPGGSSSGSA AV+ + DFALG+
Sbjct: 69 NGARFIGKTHTSELAYSMSGHNVHYGTPRNGAAPNHIPGGSSSGSASAVSNEACDFALGS 128
Query: 178 DTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQL 237
DT G VR PAS+CG+ G RP+HG +S+ G P ++DT G AR+ + V L
Sbjct: 129 DTGGSVRTPASYCGLFGLRPTHGRLSLDGCQPLCATMDTCGFFARSPEVFSTVAACLFDD 188
Query: 238 NAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPS 297
+ RL + +F S++P L++ + + L+ + P
Sbjct: 189 GRAD-ITGVRLASHEGLF--SRLP-LRSQQALLPVRQRLARFFGP--------------- 229
Query: 298 LKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAI 357
L L A ++ + +Q YE E ++ +LG +V ER
Sbjct: 230 LAPLDAPLPDADD-------IYLAFRQIQGYEAWQAQGETIERYGLQLGPDVRERFFWGK 282
Query: 358 NTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSD--PPLKLNTKKTYSAEFHDRTL 415
T+ ++R A LL D +LV+PTV D P L ++ + L
Sbjct: 283 AVTRAQFDAACQLRERFTAWWDALLG-DAVLVMPTVPDGAPLLTAQAEEIEAVRRLSHDL 341
Query: 416 VLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
+L S+ M+ QV +P+ + P+ ISF+ G D+ L++
Sbjct: 342 LLISV--MTQRPQVTLPVAQTGGLPLGISFLGPRGSDRLLVE 381
>gi|23499864|ref|NP_699304.1| amidase [Brucella suis 1330]
gi|376278087|ref|YP_005108120.1| amidase [Brucella suis VBI22]
gi|384222649|ref|YP_005613814.1| amidase [Brucella suis 1330]
gi|23463436|gb|AAN33309.1| amidase [Brucella suis 1330]
gi|343384097|gb|AEM19588.1| amidase [Brucella suis 1330]
gi|358259525|gb|AEU07258.1| amidase [Brucella suis VBI22]
Length = 401
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 128/397 (32%), Positives = 197/397 (49%), Gaps = 35/397 (8%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA PLAG + A+KD++D+ G VTG G+P + A ++A VV LL GA IGK
Sbjct: 21 AASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEFIGKAQ 80
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
+DE AF + G+N HY P+NP P + GGSSSGSA AVA +L D ALG+DT G +R PA
Sbjct: 81 MDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGSIRTPA 140
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
SFCG++G R +HG + + G++P + SLDT+G AR+ ++ +VG VLL +A E
Sbjct: 141 SFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAVLLGDDAQE------ 194
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
F+L+++ + + + Y+ A P L+A S
Sbjct: 195 -------FKLTQLLYMPVLEQLLLGQAETDAYR--------AMFAKVRPHFATLKAASQP 239
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
T ++ L +Q E + W+ S +LG + +R T D +K
Sbjct: 240 ----TLSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAEMTADMVKNQ 295
Query: 368 YKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSA--EFHDRTLVLSSIGSMSG 425
R + ++ + +L +PTV P T + + A + ++ L L + +SG
Sbjct: 296 RARRARFAEEFEAIIGESAVLALPTV--PGAAPLTGEPFEALQAYREQALRLLCLSGLSG 353
Query: 426 CCQVAIPIGK------YNEHPISISFITYHGGDKFLL 456
Q+ +P+G ++ P ISFI G D+ L+
Sbjct: 354 LPQITLPLGSLRPGGTMHDAPFGISFIGPRGSDRTLI 390
>gi|260757078|ref|ZP_05869426.1| amidase [Brucella abortus bv. 6 str. 870]
gi|260882888|ref|ZP_05894502.1| amidase [Brucella abortus bv. 9 str. C68]
gi|297249999|ref|ZP_06933700.1| amidase [Brucella abortus bv. 5 str. B3196]
gi|260677186|gb|EEX64007.1| amidase [Brucella abortus bv. 6 str. 870]
gi|260872416|gb|EEX79485.1| amidase [Brucella abortus bv. 9 str. C68]
gi|297173868|gb|EFH33232.1| amidase [Brucella abortus bv. 5 str. B3196]
Length = 401
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 129/397 (32%), Positives = 196/397 (49%), Gaps = 35/397 (8%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA PLAG + A+KD++D+ G VTG G+P + A ++A VV LL GA IGK
Sbjct: 21 AASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEFIGKAQ 80
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
DE AF + G+N HY P+NP P + GGSSSGSA AVA +L D ALGTDT G +R PA
Sbjct: 81 TDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGTDTGGSIRTPA 140
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
SFCG++G R +HG + + G++P + SLDT+G AR+ ++ +VG VLL +A E
Sbjct: 141 SFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAVLLGDDAQE------ 194
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
F+L+++ + + + Y+ A P L+A S
Sbjct: 195 -------FKLTQLLYMPVLEQLLLGQAETDAYR--------AMFAKVRPHFATLKAASQP 239
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
T ++ L +Q E + W+ S +LG + +R T D +K
Sbjct: 240 ----TLSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAEMTADMVKNQ 295
Query: 368 YKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSA--EFHDRTLVLSSIGSMSG 425
R + ++ + +L +PTV P T + + A + ++ L L + +SG
Sbjct: 296 RARRARFAEEFEAIIGESAVLALPTV--PGAAPLTGEPFEALQAYREQALRLLCLSGLSG 353
Query: 426 CCQVAIPIGK------YNEHPISISFITYHGGDKFLL 456
Q+ +P+G ++ P ISFI G D+ L+
Sbjct: 354 LPQITLPLGSLRPGGTMHDAPFGISFIGPRGSDRTLI 390
>gi|375259537|ref|YP_005018707.1| amidase [Klebsiella oxytoca KCTC 1686]
gi|397656606|ref|YP_006497308.1| amidase [Klebsiella oxytoca E718]
gi|365909015|gb|AEX04468.1| amidase [Klebsiella oxytoca KCTC 1686]
gi|394345180|gb|AFN31301.1| Amidase [Klebsiella oxytoca E718]
Length = 394
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 137/401 (34%), Positives = 194/401 (48%), Gaps = 34/401 (8%)
Query: 62 PQPPPPAARQ---PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKN 118
P PP P A PL+GL FA+KD+FDV GY TG G+P RTA VV LL N
Sbjct: 10 PYPPHPVAHALSGPLSGLTFAVKDLFDVAGYPTGGGNPHLLALSGIKNRTAPVVQKLLDN 69
Query: 119 GATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTD 178
GA IGKT E A+ ++G N HYGTP N P+HIPGGSSSGSA AV+ DFALG+D
Sbjct: 70 GARFIGKTHTSELAYSMSGHNVHYGTPRNGAAPNHIPGGSSSGSASAVSNAACDFALGSD 129
Query: 179 TIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLN 238
T G VR PAS+CG+ G RP+HG +S+ G P ++DT G AR+ + V L
Sbjct: 130 TGGSVRTPASYCGLFGLRPTHGRLSLDGCQPLCATMDTCGFFARSPEVFSAVAACLFDAE 189
Query: 239 AVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSL 298
+ RL D +F S++P L++ + + L+ + P L
Sbjct: 190 RAD-FNGVRLACHDGLF--SRLP-LRSQQALLPVRQRLARFFGP---------------L 230
Query: 299 KGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAIN 358
L A ++ + +Q YE E ++ +LG +V ER
Sbjct: 231 APLDAPLPDADD-------IYLAFRQIQGYEAWQAQGETIERYGLQLGPDVRERFFWGKA 283
Query: 359 TTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSD--PPLKLNTKKTYSAEFHDRTLV 416
T+ ++R A L D +LV+PTV D P L ++ + L+
Sbjct: 284 VTRAQFDAACQLRERFTAWWDAQLG-DAVLVMPTVPDGAPLLTAQAEEIEAVRRLSHDLL 342
Query: 417 LSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
L S+ M+ QV +P+ + P+ +SF+ G D+ L++
Sbjct: 343 LISV--MTQRPQVTLPVAQTGGLPLGMSFLGPRGSDRLLVE 381
>gi|407780206|ref|ZP_11127451.1| amidase [Nitratireductor pacificus pht-3B]
gi|407297973|gb|EKF17120.1| amidase [Nitratireductor pacificus pht-3B]
Length = 416
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 127/388 (32%), Positives = 194/388 (50%), Gaps = 31/388 (7%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAGL +KD++DV GY TG G+PD + A TA + LL GA +GKT DE
Sbjct: 47 PLAGLTMGVKDMYDVAGYPTGGGNPDRETVSGPAAETAPAIQALLDAGARFLGKTQTDEL 106
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
+ + G N H+ PVN P + GGSSSGSA AVA L D A+G+DT G +R+PASFCG
Sbjct: 107 TYSMIGMNAHFPAPVNRAAPQRVTGGSSSGSAAAVAGGLADIAVGSDTNGSIRIPASFCG 166
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
+LG R +HG + + G +P + S DT+G A ++++ +VG VLL +
Sbjct: 167 LLGLRTTHGRIPLTGAMPLAPSFDTLGWFAADSTVYAKVGEVLLGEDT------------ 214
Query: 252 DDIFQLSKVPKLKTIHVISKAIES-LSGYQNPE-HMNVGQYIASNVPSLKGLRAQSTSPE 309
K P K + + +A+ES L G Q E + + + + + A P+
Sbjct: 215 ------HKTPLAKPVRL--EALESLLFGEQEREAYAAMLRQVVRHFDRQPAFLALPEPPD 266
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
L ++Q +E + ++ AKP LG V ER A + ++
Sbjct: 267 -------VLFGHFRAIQAFEAWQAHGSFITQAKPVLGPGVRERFAYARGIGNEALENARH 319
Query: 370 VRNEMRAALQRLLKDDKILVIPT-VSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQ 428
R ++ L DD +LV+PT + PLK T + + + R L L++ + G Q
Sbjct: 320 GRRRLQQEFSALFDDDMVLVLPTQPTAAPLKSATLEELDS-YRARALTLTAFAGLLGWPQ 378
Query: 429 VAIPIGKYNEHPISISFITYHGGDKFLL 456
++IP+G+ ++ P IS + G D+ L+
Sbjct: 379 ISIPVGQVHDAPFGISLLGPAGSDRQLI 406
>gi|85707490|ref|ZP_01038568.1| amidase [Roseovarius sp. 217]
gi|85668000|gb|EAQ22883.1| amidase [Roseovarius sp. 217]
Length = 364
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 180/383 (46%), Gaps = 31/383 (8%)
Query: 76 LKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGI 135
++ +KD FD+ G VTG G P+W + H A +T+ VV LL GA IGKT +DE A+ +
Sbjct: 1 MRVGVKDGFDIAGQVTGAGCPEWAKFHGVATKTSPVVRALLDAGAEIIGKTQMDELAYSL 60
Query: 136 TGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGY 195
G N YGTPVNP P +PGGSSSGSA VAA LV+ LG+DT G +R+PASFCG+ G+
Sbjct: 61 MGVNARYGTPVNPAAPDRVPGGSSSGSAAGVAAGLVEIGLGSDTGGSIRLPASFCGLFGW 120
Query: 196 RPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIF 255
RP+HG +S ++P + S DT G R+ + V V F
Sbjct: 121 RPTHGLISGDKLVPLAPSYDTPGFFTRDLGTMAAVASV---------------------F 159
Query: 256 QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTATL 315
Q ++ + + + SL+ V + + +P ++ + P + L
Sbjct: 160 QSAQTSAEQVNFWLPSDLWSLA------EEGVSAALRAALPVVE----HRSDPISRGDDL 209
Query: 316 KALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNEMR 375
V Q YE W+ +P G + ER A T+ + + + R +R
Sbjct: 210 AGWLEVFRIHQGYEIWQTLGPWIIQNQPNFGPGIRERFETASRITRQDFDLAVERRYNIR 269
Query: 376 AALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGK 435
A L++ + ++V PT +T++ + L + + +G Q+ IP+
Sbjct: 270 AHLEKAIDSKTVIVFPTSPGAAPLRSTQQGDLEVLRNAALTMLCVAGHAGLPQITIPLTT 329
Query: 436 YNEHPISISFITYHGGDKFLLDT 458
Y P+ +S G D LL+T
Sbjct: 330 YASAPVGLSLAGARGTDHLLLET 352
>gi|161620187|ref|YP_001594073.1| amidase [Brucella canis ATCC 23365]
gi|260568563|ref|ZP_05839032.1| amidase [Brucella suis bv. 4 str. 40]
gi|376277187|ref|YP_005153248.1| amidase [Brucella canis HSK A52141]
gi|161336998|gb|ABX63302.1| amidase [Brucella canis ATCC 23365]
gi|260155228|gb|EEW90309.1| amidase [Brucella suis bv. 4 str. 40]
gi|363405561|gb|AEW15855.1| amidase [Brucella canis HSK A52141]
Length = 401
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 128/397 (32%), Positives = 196/397 (49%), Gaps = 35/397 (8%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA PLAG + A+KD++D+ G VTG G+P + A ++A VV LL GA IGK
Sbjct: 21 AASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEFIGKAQ 80
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
DE AF + G+N HY P+NP P + GGSSSGSA AVA +L D ALG+DT G +R PA
Sbjct: 81 TDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGSIRTPA 140
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
SFCG++G R +HG + + G++P + SLDT+G AR+ ++ +VG VLL +A E
Sbjct: 141 SFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAVLLGDDAQE------ 194
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
F+L+++ + + + Y+ A P L+A S
Sbjct: 195 -------FKLTQLLYMPVLEQLLLGQAETDAYR--------AMFAKVRPHFATLKAASQP 239
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
T ++ L +Q E + W+ S +LG + +R T D +K
Sbjct: 240 ----TLSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGLGIADRFAYGAEMTADMVKNQ 295
Query: 368 YKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSA--EFHDRTLVLSSIGSMSG 425
R + ++ + +L +PTV P T + + A + ++ L L + +SG
Sbjct: 296 RARRARFAEEFEAIIGESAVLALPTV--PGAAPLTGEPFEALQAYREQALRLLCLSGLSG 353
Query: 426 CCQVAIPIGK------YNEHPISISFITYHGGDKFLL 456
Q+ +P+G ++ P ISFI G D+ L+
Sbjct: 354 LPQITLPLGSLRPGGTMHDAPFGISFIGPRGSDRTLI 390
>gi|392533768|ref|ZP_10280905.1| amidase [Pseudoalteromonas arctica A 37-1-2]
Length = 400
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/393 (30%), Positives = 186/393 (47%), Gaps = 32/393 (8%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LA + A+KDVF VKG G+P+W + A+ TA V L+ G IG T DE A
Sbjct: 27 LANNRLAVKDVFAVKGERNSAGNPNWFKTAKPAKNTASSVNKLMTAGCNFIGFTHTDELA 86
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+ + G N HYG NP++ H GGSS GSA AVAA L D LGTDT G +R+PAS+CG+
Sbjct: 87 YSLEGSNIHYGAAQNPKLKGHACGGSSMGSAAAVAANLADIGLGTDTGGSIRIPASYCGL 146
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G RPSH + G++P + DT+G L ++A +L VG +LL A+ + L+ +
Sbjct: 147 YGIRPSHNVIEKDGLIPLAPPFDTIGWLTQSAELLSSVGDILLPQQAI--NKVNTLVICE 204
Query: 253 DIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGT 312
+F+L + A+++ + Q + P+ K + N
Sbjct: 205 ALFEL-----------VDPALQA----------PLKQLLEKTKPNFKHHKEFELPNSN-- 241
Query: 313 ATLKALSSVMLSLQRYEFKTIYEEWVK--SAKPRLGYNVFERVLEAINTTQDNIKILYKV 370
L L+ LQ +++W++ P+ + R A+ T + KV
Sbjct: 242 -LLNELADSFRVLQGRAIAKTHKDWLQLPGQLPQFAPAIAARFNMALALTVQEEQEALKV 300
Query: 371 RNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVA 430
+ + + + + L + L +PT KL ++ + + LS+I +SG QV
Sbjct: 301 QTQWQTLIAKNLNTNSCLFLPTTPTTAPKLGAD---TSALRMQIITLSAIAGLSGSAQVH 357
Query: 431 IPIGKY-NEHPISISFITYHGGDKFLLDTVLDL 462
+P+ N+HP S + HG DK LL V L
Sbjct: 358 LPLADLANDHPYGFSLMMSHGNDKSLLACVKHL 390
>gi|332533367|ref|ZP_08409233.1| amidase [Pseudoalteromonas haloplanktis ANT/505]
gi|332037249|gb|EGI73705.1| amidase [Pseudoalteromonas haloplanktis ANT/505]
Length = 400
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/393 (31%), Positives = 184/393 (46%), Gaps = 32/393 (8%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LA + A+KDVF VKG G+P W + A+ TA V L+ G IG T DE A
Sbjct: 27 LANNRLAVKDVFAVKGERNSAGNPHWFKTAKPAQNTASSVNKLMTAGCNFIGFTHTDELA 86
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+ + G N HYG NP++ H GGSS GSA AVAA L D LGTDT G +R+PAS+CG+
Sbjct: 87 YSLEGNNIHYGAAQNPKLKGHACGGSSMGSAAAVAANLADIGLGTDTGGSIRIPASYCGL 146
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G RPSH + G++P + DT+G L ++A +L VG+VLL A+ L+ +
Sbjct: 147 YGIRPSHNVIEKDGLIPLAPPFDTIGWLTQSAELLSDVGNVLLPNQAI--NNVDTLVICE 204
Query: 253 DIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGT 312
+F+L S Q P + Q + P+ K + +
Sbjct: 205 PLFELVD-----------------SALQAP----LKQLLEKTKPNFKHHKEFELP---NS 240
Query: 313 ATLKALSSVMLSLQRYEFKTIYEEWVK--SAKPRLGYNVFERVLEAINTTQDNIKILYKV 370
+ L L+ LQ +++W++ P+ + R A+ T + KV
Sbjct: 241 SLLNELADSFRVLQGRAIAKTHKDWLQLQGQLPQFAPAIAARFNMALALTDQEEQEALKV 300
Query: 371 RNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVA 430
+ + + + + L + L +PT KL ++ + + LS+I +SG QV
Sbjct: 301 QTQWQTLIAKNLNTNSCLFLPTTPTTAPKLGAD---TSALRMQIITLSAIAGLSGSAQVH 357
Query: 431 IPIGKY-NEHPISISFITYHGGDKFLLDTVLDL 462
+P+ N+HP S + HG DK LL V L
Sbjct: 358 LPLADLANDHPYGFSLMMSHGNDKSLLACVKHL 390
>gi|241666569|ref|YP_002984653.1| Amidase [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240862026|gb|ACS59691.1| Amidase [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 378
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 130/399 (32%), Positives = 199/399 (49%), Gaps = 48/399 (12%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA PL+GL+ A+KD+FDV GY T G+ TA +V LL GA +GKT
Sbjct: 11 AAIGPLSGLRLAVKDLFDVAGYPTAAGNAAVLAASGIKTSTAPLVQTLLDAGACFVGKTN 70
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
DE A+ + G N H+G P+NP+ P +PGGSSSGSAVAVAA L D LGTDT G +R+PA
Sbjct: 71 TDELAYSLIGGNIHFGMPINPRDPHLVPGGSSSGSAVAVAAGLADIGLGTDTSGSIRLPA 130
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN----ASILHRVGHVLLQLNAVEPR 243
+ G++G+RP+HG++ + P + S D G + R+ A+++ VG + A +
Sbjct: 131 AVNGLIGWRPTHGSLDNRALRPLAPSFDVPGFMTRSLEPMAAVMSAVG-----MPAANDQ 185
Query: 244 RARRLIFADDIFQLSKVPKLKTIH--VISKAIESLSGYQNPEHMNVGQYIASNVPSLKGL 301
+ LI DIF TI V + I L P M IAS SL L
Sbjct: 186 PSSILI-PKDIF--------ATIDDAVADEMIARLRSAGMPIRMT--NAIASF--SLADL 232
Query: 302 RAQSTSPENGTATLKALSSVMLSLQRYEF---KTIYEEWVKSAKPRLGYNVFERVLEAIN 358
AL+ + + LQR + +T++E ++ P N+ R+L +
Sbjct: 233 ---------------ALTFITI-LQREAWESNRTLFERSPEAIAP----NIAARLLSGSH 272
Query: 359 TTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLS 418
+ ++ ++R A + RLL+++ ++ +PT++ P + + + A F + L
Sbjct: 273 LVDEEVREAGRIRKLFSAEIDRLLRENVVVALPTLATSPPRRDAEPESFAAFRSACIKLL 332
Query: 419 SIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
+ +SGC Q+A PI S+S G D+ L+D
Sbjct: 333 CLSGLSGCPQLAFPIVNCAGSG-SLSLFGARGADRMLID 370
>gi|62317057|ref|YP_222910.1| amidase [Brucella abortus bv. 1 str. 9-941]
gi|83269050|ref|YP_418341.1| amidase [Brucella melitensis biovar Abortus 2308]
gi|189022322|ref|YP_001932063.1| amidase [Brucella abortus S19]
gi|237816618|ref|ZP_04595610.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella abortus
str. 2308 A]
gi|260544293|ref|ZP_05820114.1| amidase [Brucella abortus NCTC 8038]
gi|260759552|ref|ZP_05871900.1| amidase [Brucella abortus bv. 4 str. 292]
gi|260762797|ref|ZP_05875129.1| amidase [Brucella abortus bv. 2 str. 86/8/59]
gi|376270643|ref|YP_005113688.1| amidase [Brucella abortus A13334]
gi|423169073|ref|ZP_17155775.1| hypothetical protein M17_02762 [Brucella abortus bv. 1 str. NI435a]
gi|423171494|ref|ZP_17158168.1| hypothetical protein M19_02026 [Brucella abortus bv. 1 str. NI474]
gi|423174775|ref|ZP_17161445.1| hypothetical protein M1A_02172 [Brucella abortus bv. 1 str. NI486]
gi|423176653|ref|ZP_17163319.1| hypothetical protein M1E_00915 [Brucella abortus bv. 1 str. NI488]
gi|423180925|ref|ZP_17167565.1| hypothetical protein M1G_02024 [Brucella abortus bv. 1 str. NI010]
gi|423184056|ref|ZP_17170692.1| hypothetical protein M1I_02024 [Brucella abortus bv. 1 str. NI016]
gi|423187205|ref|ZP_17173818.1| hypothetical protein M1K_02022 [Brucella abortus bv. 1 str. NI021]
gi|423189626|ref|ZP_17176235.1| hypothetical protein M1M_01307 [Brucella abortus bv. 1 str. NI259]
gi|62197250|gb|AAX75549.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82939324|emb|CAJ12263.1| Amidase [Brucella melitensis biovar Abortus 2308]
gi|189020896|gb|ACD73617.1| Amidase [Brucella abortus S19]
gi|237787431|gb|EEP61647.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Brucella abortus
str. 2308 A]
gi|260097564|gb|EEW81438.1| amidase [Brucella abortus NCTC 8038]
gi|260669870|gb|EEX56810.1| amidase [Brucella abortus bv. 4 str. 292]
gi|260673218|gb|EEX60039.1| amidase [Brucella abortus bv. 2 str. 86/8/59]
gi|363401815|gb|AEW18784.1| amidase [Brucella abortus A13334]
gi|374536916|gb|EHR08434.1| hypothetical protein M17_02762 [Brucella abortus bv. 1 str. NI435a]
gi|374537114|gb|EHR08628.1| hypothetical protein M19_02026 [Brucella abortus bv. 1 str. NI474]
gi|374538279|gb|EHR09788.1| hypothetical protein M1A_02172 [Brucella abortus bv. 1 str. NI486]
gi|374547455|gb|EHR18910.1| hypothetical protein M1G_02024 [Brucella abortus bv. 1 str. NI010]
gi|374547860|gb|EHR19313.1| hypothetical protein M1I_02024 [Brucella abortus bv. 1 str. NI016]
gi|374553230|gb|EHR24650.1| hypothetical protein M1E_00915 [Brucella abortus bv. 1 str. NI488]
gi|374556932|gb|EHR28332.1| hypothetical protein M1K_02022 [Brucella abortus bv. 1 str. NI021]
gi|374557180|gb|EHR28579.1| hypothetical protein M1M_01307 [Brucella abortus bv. 1 str. NI259]
Length = 401
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 129/397 (32%), Positives = 195/397 (49%), Gaps = 35/397 (8%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA PLAG + A+KD++D+ G VTG G+P + A ++A VV LL GA IGK
Sbjct: 21 AASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEFIGKAQ 80
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
DE AF + G+N HY P+NP P + GGSSSGSA AVA +L D ALGTDT G +R PA
Sbjct: 81 TDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGTDTGGSIRTPA 140
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
SFCG++G R +HG + + G++P + SLDT+G AR+ ++ +VG VLL +A E
Sbjct: 141 SFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAVLLGDDAQE------ 194
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
F+L+++ + + + Y+ A P L+A S
Sbjct: 195 -------FKLTQLLYMPVLEQLLLGQAETDAYR--------AMFAKVRPHFATLKAASQP 239
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
T ++ L Q E + W+ S +LG + +R T D +K
Sbjct: 240 ----TLSIDELYLAFRQTQGAEAWENHGAWISSGNRQLGPRIADRFAYGAEMTADMVKNQ 295
Query: 368 YKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSA--EFHDRTLVLSSIGSMSG 425
R + ++ + +L +PTV P T + + A + ++ L L + +SG
Sbjct: 296 RARRARFAEEFEAIIGESAVLALPTV--PGAAPLTGEPFEALQAYREQALRLLCLSGLSG 353
Query: 426 CCQVAIPIGK------YNEHPISISFITYHGGDKFLL 456
Q+ +P+G ++ P ISFI G D+ L+
Sbjct: 354 LPQITLPLGSLRPGGTMHDAPFGISFIGPRGSDRTLI 390
>gi|261216740|ref|ZP_05931021.1| amidase [Brucella ceti M13/05/1]
gi|261319607|ref|ZP_05958804.1| amidase [Brucella ceti M644/93/1]
gi|260921829|gb|EEX88397.1| amidase [Brucella ceti M13/05/1]
gi|261292297|gb|EEX95793.1| amidase [Brucella ceti M644/93/1]
Length = 401
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 128/397 (32%), Positives = 196/397 (49%), Gaps = 35/397 (8%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA PLAG + A+KD++D+ G VTG G+P + A ++A VV LL GA IGK
Sbjct: 21 AASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEFIGKAQ 80
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
DE AF + G+N HY P+NP P + GGSSSGSA AVA +L D ALG+DT G +R PA
Sbjct: 81 TDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGSIRTPA 140
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
SFCG++G R +HG + + G++P + SLDT+G AR+ ++ +VG VLL +A E
Sbjct: 141 SFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAVLLGDDAQE------ 194
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
F+L+++ + + + Y+ A P L+A S
Sbjct: 195 -------FKLTQLLYMPVLEQLLLGQAETDAYR--------AMFAKVRPHFATLKAASQP 239
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
T ++ L +Q E + W+ S +LG + +R T D +K
Sbjct: 240 ----TLSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAEMTADMVKNQ 295
Query: 368 YKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSA--EFHDRTLVLSSIGSMSG 425
R + ++ + +L +PTV P T + + A + ++ L L + +SG
Sbjct: 296 RARRARFAEEFEAIIGESAVLALPTV--PGAAPLTGEPFEALQAYREQALRLLCLSGLSG 353
Query: 426 CCQVAIPIGK------YNEHPISISFITYHGGDKFLL 456
Q+ +P+G ++ P ISFI G D+ L+
Sbjct: 354 LPQITLPLGSLRPSGTMHDAPFGISFIGPRGSDRTLI 390
>gi|256014891|ref|YP_003104900.1| amidase [Brucella microti CCM 4915]
gi|261313788|ref|ZP_05952985.1| amidase [Brucella pinnipedialis M163/99/10]
gi|265987024|ref|ZP_06099581.1| amidase [Brucella pinnipedialis M292/94/1]
gi|294853125|ref|ZP_06793797.1| amidase [Brucella sp. NVSL 07-0026]
gi|255997551|gb|ACU49238.1| amidase [Brucella microti CCM 4915]
gi|261302814|gb|EEY06311.1| amidase [Brucella pinnipedialis M163/99/10]
gi|264659221|gb|EEZ29482.1| amidase [Brucella pinnipedialis M292/94/1]
gi|294818780|gb|EFG35780.1| amidase [Brucella sp. NVSL 07-0026]
Length = 401
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/397 (32%), Positives = 196/397 (49%), Gaps = 35/397 (8%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA PLAG + A+KD++D+ G VTG G+P + A ++A VV LL GA IGK
Sbjct: 21 AASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEFIGKAQ 80
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
DE AF + G+N HY P+NP P + GGSSSGSA AVA +L D ALG+DT G +R PA
Sbjct: 81 TDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGSIRTPA 140
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
SFCG++G R +HG + + G++P + SLDT+G AR+ ++ +VG VLL +A E
Sbjct: 141 SFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAVLLGDDAQE------ 194
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
F+L+++ + + + Y+ A P L+A S
Sbjct: 195 -------FKLTQLLYMPVLEQLLLGQAETDAYR--------AMFAKVRPHFATLKAASQP 239
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
T ++ L +Q E + W+ S +LG + +R T D +K
Sbjct: 240 ----TLSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAEMTADMVKNQ 295
Query: 368 YKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSA--EFHDRTLVLSSIGSMSG 425
R + ++ + +L +PTV P T + + A + ++ L L + +SG
Sbjct: 296 RARRARFAEEFEAIIGESAVLALPTV--PGAAPLTGEPFEALQAYREQALRLLCLSGLSG 353
Query: 426 CCQVAIPIGK------YNEHPISISFITYHGGDKFLL 456
Q+ +P+G ++ P ISFI G D+ L+
Sbjct: 354 LPQITLPLGSLRPGGTMHDAPFGISFIGPRGSDRTLI 390
>gi|13472622|ref|NP_104189.1| amidase [Mesorhizobium loti MAFF303099]
gi|14023368|dbj|BAB49975.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Mesorhizobium loti
MAFF303099]
Length = 398
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/404 (31%), Positives = 192/404 (47%), Gaps = 39/404 (9%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAGL+ A+KD++DV GY TG G+ + + A RTA V +L GA +GKT DE
Sbjct: 26 PLAGLRLAVKDIYDVAGYRTGCGNSRKFTESNAASRTAPAVQTILDAGARFVGKTQTDEL 85
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
AF + G+N H+ PVNP P + GGSSSGSA AVA +L D A G+DT G +R PASFCG
Sbjct: 86 AFALFGQNAHFPFPVNPAAPDRVTGGSSSGSASAVAGRLADIATGSDTGGSIRAPASFCG 145
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRAR--RLI 249
++G R +HG +++ G + + S DT G A + VG +LL + + R L
Sbjct: 146 LIGLRTTHGRIALDGTMKLAPSFDTFGWFADDIETYETVGKLLLGRDPHQHSLDRPISLT 205
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
+ D++ + + + ++ A+ +P+ R S+SP+
Sbjct: 206 WLDEMVARPALGEYAAMKALAGAV-------------------FGMPATSTTRF-SSSPD 245
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNV-----FERVLEAINTTQDNI 364
L LQ E ++ EW+ S + LG V F R ++ +N+
Sbjct: 246 E-------LYWCFRRLQAREAWGVHGEWITSGERDLGPGVEERFGFGRAVDDRTAQAENV 298
Query: 365 KILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMS 424
+ R R L LL D LV+PTV P +++ + +R L L + +S
Sbjct: 299 R-----RLTFRGELSALLGQDGFLVLPTVPGPAPYVDSTPEQFQAYRERALHLLCLAGLS 353
Query: 425 GCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQE 468
G Q+ +PIG P +S + G D L+ L D+ Q
Sbjct: 354 GFPQITLPIGSVAGAPFGLSLLGPSGSDIALIRLGRKLLDAAQR 397
>gi|265985701|ref|ZP_06098436.1| amidase [Brucella sp. 83/13]
gi|306837381|ref|ZP_07470260.1| amidase [Brucella sp. NF 2653]
gi|264664293|gb|EEZ34554.1| amidase [Brucella sp. 83/13]
gi|306407573|gb|EFM63773.1| amidase [Brucella sp. NF 2653]
Length = 401
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 133/397 (33%), Positives = 198/397 (49%), Gaps = 35/397 (8%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA PLAG + AIKD++D+ G VTG G+P + A ++A VV LL GA IGK
Sbjct: 21 AASGPLAGERLAIKDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEFIGKAQ 80
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
DE AF + G+N HY P+NP P + GGSSSGSA AVA +L D ALG+DT G +R PA
Sbjct: 81 TDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGSIRTPA 140
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
SFCG++G R +HG + + G++P + SLDT+G AR+ ++ +VG VLL +A E +
Sbjct: 141 SFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAVLLGDDAQEFK---- 196
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
+ QL +P L+ + L G + V A P L+A S
Sbjct: 197 ------LTQLLYMPVLEQL---------LLGQAETDAYCV--MFAKVRPYFTNLKAASQP 239
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
T ++ L +Q E + W+ S +LG + +R T D +K
Sbjct: 240 ----TLSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAEMTADMVKNQ 295
Query: 368 YKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSA--EFHDRTLVLSSIGSMSG 425
R + ++ + +L +PTV P T + + A + ++ L L + +SG
Sbjct: 296 RARRARFAEEFEAIIGESAVLALPTV--PGAAPLTGEPFEALQAYREQALRLLCLSGLSG 353
Query: 426 CCQVAIPIGK------YNEHPISISFITYHGGDKFLL 456
Q+ +P+G ++ P ISFI G D+ L+
Sbjct: 354 LPQITLPLGSLRPGGTMHDAPFGISFIGPRGSDRALI 390
>gi|225685963|ref|YP_002733935.1| amidase [Brucella melitensis ATCC 23457]
gi|256262912|ref|ZP_05465444.1| amidase [Brucella melitensis bv. 2 str. 63/9]
gi|265993439|ref|ZP_06105996.1| amidase [Brucella melitensis bv. 3 str. Ether]
gi|384212637|ref|YP_005601720.1| amidase [Brucella melitensis M5-90]
gi|384409737|ref|YP_005598357.1| amidase [Brucella melitensis M28]
gi|384446267|ref|YP_005660485.1| amidase [Brucella melitensis NI]
gi|225642068|gb|ACO01981.1| amidase [Brucella melitensis ATCC 23457]
gi|262764309|gb|EEZ10341.1| amidase [Brucella melitensis bv. 3 str. Ether]
gi|263092750|gb|EEZ16959.1| amidase [Brucella melitensis bv. 2 str. 63/9]
gi|326410284|gb|ADZ67348.1| amidase [Brucella melitensis M28]
gi|326553577|gb|ADZ88216.1| amidase [Brucella melitensis M5-90]
gi|349744264|gb|AEQ09806.1| amidase [Brucella melitensis NI]
Length = 401
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/397 (32%), Positives = 195/397 (49%), Gaps = 35/397 (8%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA PLAG + A+KD++D+ G VTG G+P + A ++A VV LL GA IGK
Sbjct: 21 AASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEFIGKAQ 80
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
DE AF + G+N HY P+NP P + GGSSSGSA AVA +L D ALG+DT G +R PA
Sbjct: 81 TDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGSIRTPA 140
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
SFCG++G R +HG + + G++P + SLDT+G AR+ ++ +VG VLL +A E
Sbjct: 141 SFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAVLLGDDAQE------ 194
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
F+L+++ + + + Y+ A P L+A S
Sbjct: 195 -------FKLTQLLYMPVLEQLLLGQAETDAYR--------AMFAKVRPHFATLKAASQP 239
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
T ++ L +Q E + W+ S +LG + +R T D +K
Sbjct: 240 ----TLSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAEMTADMVKNQ 295
Query: 368 YKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSA--EFHDRTLVLSSIGSMSG 425
R + ++ + +L +PTV P T + + A + ++ L L + +SG
Sbjct: 296 RARRARFAEEFEAIIGESAVLALPTV--PGAAPLTGEPFEALQAYREQALRLLCLSGLSG 353
Query: 426 CCQVAIPIGKYN------EHPISISFITYHGGDKFLL 456
Q+ +P+G + P ISFI G D+ L+
Sbjct: 354 LPQITLPLGSLRPGGTMYDAPFGISFIGPRGSDRTLI 390
>gi|148558743|ref|YP_001257168.1| amidase [Brucella ovis ATCC 25840]
gi|148370028|gb|ABQ62900.1| amidase [Brucella ovis ATCC 25840]
Length = 401
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/397 (32%), Positives = 196/397 (49%), Gaps = 35/397 (8%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA PLAG + A+KD++D+ G VTG G+P + A ++A VV LL GA IGK
Sbjct: 21 AASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEFIGKAQ 80
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
DE AF + G+N HY P+NP P + GGSSSGSA AVA +L D ALG+DT G +R PA
Sbjct: 81 TDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGSIRTPA 140
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
SFCG++G R +HG + + G++P + SLDT+G AR+ ++ +VG VLL +A E
Sbjct: 141 SFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAVLLGDDAQE------ 194
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
F+L+++ + + + Y+ A P L+A S
Sbjct: 195 -------FKLTQLLYMPVLEQLLLGQAETDAYR--------AMFAKVRPHFATLKAASQP 239
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
T ++ L +Q E + W+ S +LG + +R T D +K
Sbjct: 240 ----TLSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFSYGAEMTADMVKNQ 295
Query: 368 YKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSA--EFHDRTLVLSSIGSMSG 425
R + ++ + +L +PTV P T + + A + ++ L L + +SG
Sbjct: 296 RARRARFAEEFEAIIGESAVLALPTV--PGAAPLTGEPFEALQAYREQALRLLCLSGLSG 353
Query: 426 CCQVAIPIGK------YNEHPISISFITYHGGDKFLL 456
Q+ +P+G ++ P ISFI G D+ L+
Sbjct: 354 LPQITLPLGSLRPGGTMHDAPFGISFIGPRGSDRTLI 390
>gi|17989479|ref|NP_542112.1| amidase [Brucella melitensis bv. 1 str. 16M]
gi|260564256|ref|ZP_05834741.1| amidase [Brucella melitensis bv. 1 str. 16M]
gi|265989461|ref|ZP_06102018.1| amidase [Brucella melitensis bv. 1 str. Rev.1]
gi|17985361|gb|AAL54376.1| amidase [Brucella melitensis bv. 1 str. 16M]
gi|260151899|gb|EEW86992.1| amidase [Brucella melitensis bv. 1 str. 16M]
gi|263000130|gb|EEZ12820.1| amidase [Brucella melitensis bv. 1 str. Rev.1]
Length = 401
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/397 (32%), Positives = 195/397 (49%), Gaps = 35/397 (8%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA PLAG + A+KD++D+ G VTG G+P + A ++A VV LL GA IGK
Sbjct: 21 AASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEFIGKAQ 80
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
DE AF + G+N HY P+NP P + GGSSSGSA AVA +L D ALG+DT G +R PA
Sbjct: 81 TDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGSIRTPA 140
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
SFCG++G R +HG + + G++P + SLDT+G AR+ ++ +VG VLL +A E
Sbjct: 141 SFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAVLLGDDAQE------ 194
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
F+L+++ + + + Y+ A P L+A S
Sbjct: 195 -------FKLTQLLYMPVLEQLLLGQAETDAYR--------AMFAKVRPHFATLKAASQP 239
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
T ++ L +Q E + W+ S +LG + +R T D +K
Sbjct: 240 ----TLSIDELYLAFSQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAEMTADMVKNQ 295
Query: 368 YKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSA--EFHDRTLVLSSIGSMSG 425
R + ++ + +L +PTV P T + + A + ++ L L + +SG
Sbjct: 296 RARRARFAEEFEAIIGESAVLALPTV--PGAAPLTGEPFEALQAYREQALRLLCLSGLSG 353
Query: 426 CCQVAIPIGKYN------EHPISISFITYHGGDKFLL 456
Q+ +P+G + P ISFI G D+ L+
Sbjct: 354 LPQITLPLGSLRPGGTMYDAPFGISFIGPRGSDRTLI 390
>gi|261318972|ref|ZP_05958169.1| amidase [Brucella pinnipedialis B2/94]
gi|340791861|ref|YP_004757325.1| amidase [Brucella pinnipedialis B2/94]
gi|261298195|gb|EEY01692.1| amidase [Brucella pinnipedialis B2/94]
gi|340560320|gb|AEK55557.1| amidase [Brucella pinnipedialis B2/94]
Length = 401
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 128/397 (32%), Positives = 196/397 (49%), Gaps = 35/397 (8%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA PLAG + A+KD++D+ G VTG G+P + A ++A VV LL GA IGK
Sbjct: 21 AASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEFIGKAQ 80
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
DE AF + G+N HY P+NP P + GGSSSGSA AVA +L D ALG+DT G +R PA
Sbjct: 81 TDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGSIRTPA 140
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
SFCG++G R +HG + + G++P + SLDT+G AR+ ++ +VG VLL +A E
Sbjct: 141 SFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAVLLGDDAQE------ 194
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
F+L+++ + + + Y+ A P L+A S
Sbjct: 195 -------FKLTQLLYMPVLEQLLLGQAETDAYR--------AMFAKVRPHFAILKAASQP 239
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
T ++ L +Q E + W+ S +LG + +R T D +K
Sbjct: 240 ----TLSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAEMTADMVKNQ 295
Query: 368 YKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSA--EFHDRTLVLSSIGSMSG 425
R + ++ + +L +PTV P T + + A + ++ L L + +SG
Sbjct: 296 RARRARFAEEFEAIIGESAVLALPTV--PGAAPLTGEPFEALQAYREQALRLLCLSGLSG 353
Query: 426 CCQVAIPIGK------YNEHPISISFITYHGGDKFLL 456
Q+ +P+G ++ P ISFI G D+ L+
Sbjct: 354 LPQITLPLGSLRPGGTMHDAPFGISFIGPRGSDRTLI 390
>gi|304393377|ref|ZP_07375305.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Ahrensia sp. R2A130]
gi|303294384|gb|EFL88756.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Ahrensia sp. R2A130]
Length = 390
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 134/429 (31%), Positives = 205/429 (47%), Gaps = 58/429 (13%)
Query: 39 RNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDW 98
+NP+LN ++ E ++ P A PLAGLK A+KD++ V GY G+GSP
Sbjct: 2 KNPELNAWCNY----EHAKV-------PHAETGPLAGLKLAVKDIYQVAGYPNGWGSPTR 50
Query: 99 KRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGS 158
+ T V+ +L G GK+ +E F +TG NKHYG PVN P + GGS
Sbjct: 51 LVEAEVDTETQSVIQQMLDAGIEVAGKSQCEELCFSLTGINKHYGAPVNAAAPDRVTGGS 110
Query: 159 SSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVG 218
SSGSA V+A +V+ A G+DT G VR PAS+CG++G RP++G +S+ +P + S D G
Sbjct: 111 SSGSASLVSAGVVEVATGSDTGGSVRGPASYCGLIGLRPTYGRLSLDRTMPLADSYDCFG 170
Query: 219 LLARNASILHRVGHVLLQLNAVEPRRARRLI---------FADDIFQLSKVPKLKTIHVI 269
++ +V V+L +A + + RRLI DD + + K +I
Sbjct: 171 WFTKDGETFGKVADVVLGEDA-DDTKLRRLIAVPELDAQLLGDDDY----LAYAKGAEII 225
Query: 270 SKAIESLSGYQNPEHMNVGQ-YIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRY 328
K + ++ P ++ + Y A V Q Y
Sbjct: 226 EKHFDDERHFE-PLPFDLEEAYWAFRV-----------------------------CQAY 255
Query: 329 EFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKIL 388
E W++ KP+LG V ER + T+ + + R E R AL+ L+ D +L
Sbjct: 256 EAWQSLGPWIEKNKPQLGPGVKERFEFGASITKADFEKQVPKRLECRLALEELIGSDGLL 315
Query: 389 VIPTV-SDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFIT 447
V+PT+ S PLK +++T A F +R L L + SG Q+ +P+ + P+ +S I
Sbjct: 316 VMPTMPSCAPLKNESEETLQA-FRERALRLLCLSGNSGLPQITLPLATVHGAPLGVSIIG 374
Query: 448 YHGGDKFLL 456
G D+ L+
Sbjct: 375 PRGSDRRLV 383
>gi|423113089|ref|ZP_17100780.1| hypothetical protein HMPREF9689_00837 [Klebsiella oxytoca 10-5245]
gi|376389631|gb|EHT02321.1| hypothetical protein HMPREF9689_00837 [Klebsiella oxytoca 10-5245]
Length = 394
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 133/402 (33%), Positives = 190/402 (47%), Gaps = 34/402 (8%)
Query: 61 FPQPPPPAARQ---PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLK 117
P PP P A PL+GL FA+KD+FDV GY TG G+P RTA VV LL
Sbjct: 9 MPYPPHPVAHALSGPLSGLTFAVKDLFDVAGYPTGGGNPHLLALSGVKTRTAPVVQKLLD 68
Query: 118 NGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGT 177
NGA IGKT E A+ ++G N HYGTP N P+HIPGGSSSGSA AV+ + DFALG+
Sbjct: 69 NGARFIGKTHTSELAYSMSGHNVHYGTPRNGAAPNHIPGGSSSGSASAVSNEACDFALGS 128
Query: 178 DTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQL 237
DT G VR PAS+CG+ G RP+HG +S+ G P ++DT G AR+ + V L
Sbjct: 129 DTGGSVRTPASYCGLFGLRPTHGRLSLDGCQPLCATMDTCGFFARSPEVFSTVAACLFDD 188
Query: 238 NAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPS 297
+ RL + +F + + + + + + L G P + + +P
Sbjct: 189 GRAD-ITGVRLASHEGLFSRLPLRSQQALLPVRQTLARLFGPVTP--------LGAPLPD 239
Query: 298 LKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAI 357
+ + +Q YE E ++ +LG +V ER
Sbjct: 240 VDDIYL-----------------AFRQIQGYEAWQAQGETIERYGLQLGPDVRERFFWGK 282
Query: 358 NTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSD--PPLKLNTKKTYSAEFHDRTL 415
T+ + R A L D +LV+PTV D P L ++ + L
Sbjct: 283 AVTRAQFDAACQQRERFTAWWDAQLG-DAVLVMPTVPDGAPLLTAQAEEIEAVRRLSHDL 341
Query: 416 VLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
+L S+ M+ QV +P+ + P+ ISF+ G D+ L++
Sbjct: 342 LLISV--MTQRPQVTLPVARTGGLPLGISFLGPRGSDRLLVE 381
>gi|414072378|ref|ZP_11408322.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Pseudoalteromonas sp. Bsw20308]
gi|410805194|gb|EKS11216.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Pseudoalteromonas sp. Bsw20308]
Length = 401
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 122/393 (31%), Positives = 184/393 (46%), Gaps = 32/393 (8%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LA + A+KDVF VKG G+P W + A+ TA V L+ G IG T DE A
Sbjct: 28 LANNRLAVKDVFAVKGERNSAGNPHWFKTAKPAQNTASSVNKLMTAGCNFIGFTHTDELA 87
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+ + G N HYG NP++ H GGSS GSA AVAA L D LGTDT G +R+PAS+CG+
Sbjct: 88 YSLEGNNIHYGAAQNPKLKGHACGGSSMGSAAAVAANLADIGLGTDTGGSIRIPASYCGL 147
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G RPSH + G++P + DT+G L ++A +L VG VLL A+ L+ +
Sbjct: 148 YGIRPSHNVIEKDGLIPLAPPFDTIGWLTQSAELLSDVGSVLLPNQAI--NNVDTLVICE 205
Query: 253 DIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGT 312
+F+L + A+++ + Q + P+ K + N
Sbjct: 206 PLFEL-----------VDPALQA----------PLKQLLEKTKPNFKHHKEFELPNSN-- 242
Query: 313 ATLKALSSVMLSLQRYEFKTIYEEWVK--SAKPRLGYNVFERVLEAINTTQDNIKILYKV 370
L L+ LQ +++W++ P+ + R A+ T + KV
Sbjct: 243 -LLNELADSFRVLQGRAIAKTHKDWLQLPGQLPQFAPAIAARFNMALALTDQEEQEALKV 301
Query: 371 RNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVA 430
+ + + + + L + L +PT KL ++ + + LS+I +SG QV
Sbjct: 302 QTQWQTLIAKNLNTNSCLFLPTTPTTAPKLGAD---TSALRMQIITLSAIAGLSGSAQVH 358
Query: 431 IPIGKY-NEHPISISFITYHGGDKFLLDTVLDL 462
+P+ N+HP S + HG DK LL V L
Sbjct: 359 LPLADLANDHPYGFSLMMSHGNDKSLLACVKHL 391
>gi|407972843|ref|ZP_11153756.1| putative amidase family protein [Nitratireductor indicus C115]
gi|407431614|gb|EKF44285.1| putative amidase family protein [Nitratireductor indicus C115]
Length = 399
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 135/431 (31%), Positives = 208/431 (48%), Gaps = 46/431 (10%)
Query: 43 LNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDH 102
L+ +D G +E+ +L P PL L+F +KD D+ G+ T +GSP W+ H
Sbjct: 2 LDRAIDLG-LVEQLDLAPLRH-------GPLDKLRFTVKDNIDIAGHKTSYGSPAWRNAH 53
Query: 103 HEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGS 162
A+ V LL GA C+GK V DEF + + GE+ H+GTP N + P IPGGSSSGS
Sbjct: 54 PAPVHNALCVDQLLAAGARCVGKAVADEFTYSLDGESFHFGTPRNAKAPDRIPGGSSSGS 113
Query: 163 AVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLAR 222
A +VA + DF+L TD G +RVPAS CG+ G RPS +S GVLP S+ TVG+LA
Sbjct: 114 AASVANGIADFSLCTDAGGSIRVPASLCGLWGMRPSTHRISEAGVLPFQPSVSTVGVLAE 173
Query: 223 NASILHRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTI------HVISKAIESL 276
+L V+L A P R+I +D ++ P ++ + S+A +L
Sbjct: 174 RLDVLDAAMRVMLNGPAAPPPSPGRIIILEDAMSIAS-PAVQDQAASALERIASRAGLAL 232
Query: 277 SGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEE 336
+ E +G+ + +L GLR LQ EF++
Sbjct: 233 ERVRFSEI--IGEQSELSACNLNGLR---------------------DLQTAEFQSTVGN 269
Query: 337 WVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNEMRAALQ--RLLKDDKILVIPTV- 393
W+++ KP LG+ F + D I L ++ N R Q D ++ PT
Sbjct: 270 WIEACKPELGFT-FSMAYGNVQRF-DRIAALDRLANRERLFRQINAFFTPDTVISFPTTP 327
Query: 394 SDPPLK--LNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGG 451
+ P K LNT + A F+D + +++ + +++ P+ P+ +SF+ +
Sbjct: 328 TIAPRKGSLNTLEAVMA-FYDPAMTITAFSGAARLPEISAPLLSVEHCPVGLSFVAGNYQ 386
Query: 452 DKFLLDTVLDL 462
D+FLL+ V ++
Sbjct: 387 DEFLLNAVREM 397
>gi|423107210|ref|ZP_17094905.1| hypothetical protein HMPREF9687_00456 [Klebsiella oxytoca 10-5243]
gi|376389336|gb|EHT02028.1| hypothetical protein HMPREF9687_00456 [Klebsiella oxytoca 10-5243]
Length = 394
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 133/402 (33%), Positives = 190/402 (47%), Gaps = 34/402 (8%)
Query: 61 FPQPPPPAARQ---PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLK 117
P PP P A PL+GL FA+KD+FDV GY TG G+P RTA VV LL
Sbjct: 9 MPYPPHPVAHALSGPLSGLTFAVKDLFDVAGYPTGGGNPHLLALSGVKTRTAPVVQKLLD 68
Query: 118 NGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGT 177
NGA IGKT E A+ ++G N HYGTP N P+HIPGGSSSGSA AV+ + DFALG+
Sbjct: 69 NGARFIGKTHTSELAYSMSGHNVHYGTPRNGAAPNHIPGGSSSGSASAVSNEACDFALGS 128
Query: 178 DTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQL 237
DT G VR PAS+CG+ G RP+HG +S+ G P ++DT G AR+ + V L
Sbjct: 129 DTGGSVRTPASYCGLFGLRPTHGRLSLDGCQPLCATMDTCGFFARSPEVFSTVAACLFDD 188
Query: 238 NAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPS 297
+ RL + +F + + + + + + L G P + + +P
Sbjct: 189 GRAD-ITGVRLASHEGLFSRLPLRSQQALLPVRQELARLFGPVTP--------LGAPLPD 239
Query: 298 LKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAI 357
+ + +Q YE E ++ +LG +V ER
Sbjct: 240 VDDIYL-----------------AFRQIQGYEAWQAQGETIERYGLQLGPDVRERFFWGK 282
Query: 358 NTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSD--PPLKLNTKKTYSAEFHDRTL 415
T+ + R A L D +LV+PTV D P L ++ + L
Sbjct: 283 AVTRAQFDAACQQRERFTAWWDAQLG-DAVLVMPTVPDGAPLLTAQAEEIEAVRRLSHDL 341
Query: 416 VLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
+L S+ M+ QV +P+ + P+ ISF+ G D+ L++
Sbjct: 342 LLISV--MTQRPQVTLPVARTGGLPLGISFLGPRGSDRLLVE 381
>gi|424877918|ref|ZP_18301558.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WU95]
gi|392520410|gb|EIW45139.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WU95]
Length = 378
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 129/399 (32%), Positives = 199/399 (49%), Gaps = 48/399 (12%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA PL+GL+ A+KD+FDV GY T G+ TA +V LL GA +GKT
Sbjct: 11 AAIGPLSGLRLAVKDLFDVAGYPTAAGNAAVLAASGIKTSTAPLVQTLLDAGACFVGKTN 70
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
DE A+ + G N H+G P+NP+ P +PGGSSSGSAVAVAA L D LGTDT G +R+PA
Sbjct: 71 TDELAYSLIGGNIHFGMPINPRDPHLVPGGSSSGSAVAVAAGLADIGLGTDTSGSIRLPA 130
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN----ASILHRVGHVLLQLNAVEPR 243
+ G++G+RP+HG++ + P + S D G + R+ A+++ VG + A +
Sbjct: 131 AVNGLIGWRPTHGSLDNRALRPLAPSFDVPGFMTRSLEPMAAVMSAVG-----MPAANDQ 185
Query: 244 RARRLIFADDIFQLSKVPKLKTIH--VISKAIESLSGYQNPEHMNVGQYIASNVPSLKGL 301
+ LI DIF TI V + I L P M IAS SL L
Sbjct: 186 PSSILI-PKDIF--------ATIDDAVADEMIARLRSAGMPIRMT--NAIASF--SLADL 232
Query: 302 RAQSTSPENGTATLKALSSVMLSLQRYEF---KTIYEEWVKSAKPRLGYNVFERVLEAIN 358
AL+ + + LQR + +T++E ++ P ++ R+L +
Sbjct: 233 ---------------ALTFITI-LQREAWESNRTLFERSPEAIAP----DIAARLLSGSH 272
Query: 359 TTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLS 418
+ ++ ++R A + RLL+++ ++ +PT++ P + + + A F + L
Sbjct: 273 LVDEEVREAGRIRKLFSAEIDRLLRENVVVALPTLATSPPRRDAEPESFAAFRSACIKLL 332
Query: 419 SIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
+ +SGC Q+A PI S+S G D+ L+D
Sbjct: 333 CLSGLSGCPQLAFPIVNCAGSG-SLSLFGARGADRMLID 370
>gi|359452027|ref|ZP_09241390.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Pseudoalteromonas sp. BSi20495]
gi|358050908|dbj|GAA77639.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Pseudoalteromonas sp. BSi20495]
Length = 401
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 121/397 (30%), Positives = 184/397 (46%), Gaps = 40/397 (10%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LA + A+KDVF VKG G+P W + A+ TA V L+ G IG T DE A
Sbjct: 28 LANNRLAVKDVFAVKGERNSAGNPHWFKTAKPAQNTASSVNKLMTVGCNFIGFTHTDELA 87
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+ + G N HYG NP++ H GGSS GSA AVAA L D LGTDT G +R+PAS+CG+
Sbjct: 88 YSLEGNNIHYGAAQNPKLKGHACGGSSMGSAAAVAANLADIGLGTDTGGSIRIPASYCGL 147
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G RPSH + G++P + DT+G L ++A +L VG+VLL A+ L+ +
Sbjct: 148 YGIRPSHNVIEKDGLIPLAPPFDTIGWLTQSAELLSDVGNVLLPNQAI--NNVDTLVICE 205
Query: 253 DIFQLS----KVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSP 308
+F+L +VP + + I + ++ P
Sbjct: 206 PLFELVDPVLQVPLKQLLEKIKPNFKHHKEFELPN------------------------- 240
Query: 309 ENGTATLKALSSVMLSLQRYEFKTIYEEWVK--SAKPRLGYNVFERVLEAINTTQDNIKI 366
++ L L+ LQ +++W++ P+ + R A+ T +
Sbjct: 241 ---SSLLSELADSFRVLQGRAIAKTHKDWLQLPGQLPQFAPAIAARFNMALALTDQEEQE 297
Query: 367 LYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGC 426
KV+ + + + + L + L +PT KL ++ + + LS+I +SG
Sbjct: 298 ALKVQTQWQTLIAKNLNTNSCLFLPTTPTTAPKLGAD---TSALRMQIITLSAIAGLSGS 354
Query: 427 CQVAIPIGKY-NEHPISISFITYHGGDKFLLDTVLDL 462
QV +P+ N+HP S + HG DK LL V L
Sbjct: 355 AQVHLPLADLANDHPYGFSLMMSHGNDKSLLACVKHL 391
>gi|336246966|ref|YP_004590676.1| amidase [Enterobacter aerogenes KCTC 2190]
gi|334733022|gb|AEG95397.1| amidase [Enterobacter aerogenes KCTC 2190]
Length = 381
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 129/392 (32%), Positives = 180/392 (45%), Gaps = 37/392 (9%)
Query: 76 LKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGI 135
L FA+KD D+ G+ T GSP + D A R A VV LL NG GKT L E AFG+
Sbjct: 27 LTFAVKDSLDIAGFPTRAGSPVLQ-DAPPAVRHAAVVEALLDNGCQLRGKTTLHELAFGV 85
Query: 136 TGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGY 195
TG N H GTP NP P IPGGSSSGSA VAA VDFA+GTDT G VR+PA+ CG+ G
Sbjct: 86 TGINPHSGTPRNPHYPQLIPGGSSSGSAAVVAAGEVDFAVGTDTGGSVRMPAACCGVAGL 145
Query: 196 RPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIF 255
+PS G +S GV+P SLD VGL AR+ + L + L +A RR
Sbjct: 146 KPSFGRLSRAGVMPTESSLDCVGLFARDIATLRQALAKALGESAPPARRD---------- 195
Query: 256 QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTATL 315
+ AI L+G PE + Q I S + ++ P A
Sbjct: 196 --------------APAISYLAGTATPE---IEQLIVSRLQQAGLAWTRAELPGFNEAHQ 238
Query: 316 KALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNEMR 375
L +V+ F +I P L +V R+ + VR +
Sbjct: 239 AGL-TVISQENWLAFHSIIN------APNLAPDVARRIHAGAEIGPQQRQAAESVRQQFS 291
Query: 376 AALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGK 435
AA+ L ++V+PT+ + P L + LV ++SG +++P+G+
Sbjct: 292 AAVDAQLAKTPLIVLPTLPECPPTLEEAADPLKVVNLTRLVRPF--NLSGHPALSLPLGE 349
Query: 436 YNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
N P+++ + + LL+ L + L+
Sbjct: 350 INHRPVALQLVANKNKEFDLLNYAEYLLEKLK 381
>gi|119469834|ref|ZP_01612672.1| amidase [Alteromonadales bacterium TW-7]
gi|119446817|gb|EAW28089.1| amidase [Alteromonadales bacterium TW-7]
Length = 402
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 182/401 (45%), Gaps = 32/401 (7%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L+ + A+KDVF VK G+P W + H A++TA V L+ G G T DE A
Sbjct: 29 LSTKRLAVKDVFAVKKQKNSAGNPCWFKTHPPAQQTASSVNNLMDAGCIFKGFTHTDELA 88
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+ + G N HYG NP++ H GGSS GSA AVA L D LGTDT G +R+PAS+CG+
Sbjct: 89 YSLEGNNTHYGAAQNPKIKGHACGGSSMGSAAAVAGNLADIGLGTDTGGSIRIPASYCGL 148
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G RPSH + G++P + DT+G L ++A +L +VG+VLL A+ L+ +
Sbjct: 149 FGIRPSHNVIEKDGLIPLAPHFDTIGWLTQSAELLEKVGNVLLPNQAI--NSVNTLVICE 206
Query: 253 DIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGT 312
+F+L P L+ ++ L P + ++ N+
Sbjct: 207 PLFELVS-PALQA------PLKQLLKKTKPYFKHHKEFELPNI----------------- 242
Query: 313 ATLKALSSVMLSLQRYEFKTIYEEWVK--SAKPRLGYNVFERVLEAINTTQDNIKILYKV 370
+ L L+ LQ +++W++ P+ + R A+ T K V
Sbjct: 243 SLLSELADSFRILQGRAIAKAHKDWLQLPEHPPQFAPAIAARFKMALALTDQEEKEALNV 302
Query: 371 RNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVA 430
+ + + + + L L +PT KL ++ + + LS+I +S QV
Sbjct: 303 QTQWQTLIAKNLNSTSCLFLPTTPTTAPKLGAD---TSALRMQIITLSAIAGLSRSAQVH 359
Query: 431 IPIGKY-NEHPISISFITYHGGDKFLLDTVLDLYDSLQEQV 470
+P+ + HP S + H DK LL L +++
Sbjct: 360 LPLANLASGHPYGFSLMMSHNNDKSLLACATQLAAYFKQET 400
>gi|306845477|ref|ZP_07478050.1| amidase [Brucella inopinata BO1]
gi|306274128|gb|EFM55947.1| amidase [Brucella inopinata BO1]
Length = 401
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 127/397 (31%), Positives = 195/397 (49%), Gaps = 35/397 (8%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA LAG + A+KD++D+ G VTG G+P + A ++A VV LL GA IGK
Sbjct: 21 AASGALAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEFIGKAQ 80
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
DE AF + G+N HY P+NP P + GGSSSGSA AVA +L D ALG+DT G +R PA
Sbjct: 81 TDELAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGSIRTPA 140
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
SFCG++G R +HG + + G++P + SLDT+G AR+ ++ +VG VLL +A E
Sbjct: 141 SFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAVLLGDDAQE------ 194
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
F+L+++ + + + Y+ A P L+A S
Sbjct: 195 -------FKLTQLLYMPVLEQLLLGQAETDAYR--------AMFAKVRPHFANLKAASQP 239
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
T ++ L +Q E + W+ S +LG + +R T D +K
Sbjct: 240 ----TLSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAEMTPDMVKNQ 295
Query: 368 YKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSA--EFHDRTLVLSSIGSMSG 425
R + ++ + +L +PTV P T + + A + ++ L L + +SG
Sbjct: 296 RARRARFAEEFEAIIGESAVLALPTV--PGAAPFTSEPFEALQAYREQALRLLCLSGLSG 353
Query: 426 CCQVAIPIGK------YNEHPISISFITYHGGDKFLL 456
Q+ +P+G ++ P ISFI G D+ L+
Sbjct: 354 LPQITLPLGSLRPGGTMHDAPFGISFIGPRGSDRTLI 390
>gi|406989082|gb|EKE08899.1| hypothetical protein ACD_16C00238G0004 [uncultured bacterium]
Length = 399
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 122/381 (32%), Positives = 195/381 (51%), Gaps = 29/381 (7%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G +FA+KDVFDVKG+ T G+PD+ + +TA VT+L + GA +GKT DE
Sbjct: 27 LKGYRFAVKDVFDVKGFRTQAGNPDYFAQIAPSVKTAQAVTILQEAGAILVGKTHTDELG 86
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+ G N+HYG P+N P+ +PGGSSSGSA AVAA L+DFALG DT G VR PASFCGI
Sbjct: 87 GSLFGLNEHYGPPINSYSPNCVPGGSSSGSAAAVAANLIDFALGADTSGSVRAPASFCGI 146
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G RP+ + GVLP S LDTVG+ AR+ I+ +V
Sbjct: 147 YGLRPTFDRIPTTGVLPISPHLDTVGVFARHPDIIAQVL--------------------- 185
Query: 253 DIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGT 312
D++ + + + + +I + SL + Q + +GL + S+
Sbjct: 186 DVYGIKEQREFSRLRIIPYLVNSL-------EETLKQSFQEKLTEFQGLTSSSSPFILDE 238
Query: 313 ATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRN 372
TL S+V+ ++ Y ++++W+ P G + ER+ A + + + K +
Sbjct: 239 ETLTQWSTVIRTIAMYGLWNVHKDWILKTTPTFGKLISERLKLASSISTEEYKRALLQQK 298
Query: 373 EMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIP 432
E++ + L+ + ++V PTV D L++ ++ +F +T + + ++SG ++ +P
Sbjct: 299 EIQTFMDDGLEPEDVVVFPTVHDIAPLLSSSLSHLKDFALKTSRHTCVAALSGFPEITLP 358
Query: 433 IGKYN-EHPISISFITYHGGD 452
+ N +SF+ G D
Sbjct: 359 LRNVNIRGCFGMSFLGKAGED 379
>gi|261323626|ref|ZP_05962823.1| amidase [Brucella neotomae 5K33]
gi|261299606|gb|EEY03103.1| amidase [Brucella neotomae 5K33]
Length = 401
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 127/397 (31%), Positives = 195/397 (49%), Gaps = 35/397 (8%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA PLAG + A+KD++D+ G VTG G+P + A ++A VV LL GA IGK
Sbjct: 21 AASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEFIGKAQ 80
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
DE AF + G+N HY P+NP P + GGSSSGSA AVA +L D ALG+DT G +R PA
Sbjct: 81 TDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGSIRTPA 140
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
SFCG++G R +HG + + G++P + SLDT+G AR+ ++ +VG V L +A E
Sbjct: 141 SFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAVPLGDDAQE------ 194
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
F+L+++ + + + Y+ A P L+A S
Sbjct: 195 -------FKLTQLLYMPVLEQLLLGQAETDAYR--------AMFAKVRPHFATLKAASQP 239
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
T ++ L +Q E + W+ S +LG + +R T D +K
Sbjct: 240 ----TLSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAEMTADMVKNQ 295
Query: 368 YKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSA--EFHDRTLVLSSIGSMSG 425
R + ++ + +L +PTV P T + + A + ++ L L + +SG
Sbjct: 296 RARRARFAEEFEAIIGESAVLALPTV--PGAAPLTGEPFEALQAYREQALRLLCLSGLSG 353
Query: 426 CCQVAIPIGK------YNEHPISISFITYHGGDKFLL 456
Q+ +P+G ++ P ISFI G D+ L+
Sbjct: 354 LPQITLPLGSLRPGGTMHDAPFGISFIGPRGSDRTLI 390
>gi|261749862|ref|ZP_05993571.1| amidase [Brucella suis bv. 5 str. 513]
gi|261739615|gb|EEY27541.1| amidase [Brucella suis bv. 5 str. 513]
Length = 404
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 131/398 (32%), Positives = 195/398 (48%), Gaps = 34/398 (8%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA PLAG + A+KD++D+ G VTG G+P + A ++A VV LL GA IGK
Sbjct: 21 AASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEFIGKAQ 80
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
DE AF + G+N HY P+NP P + GGSSSGSA AVA +L D ALG+DT G +R PA
Sbjct: 81 TDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGSIRTPA 140
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
SFCG++G R +HG + + G++P + SLDT+G AR+ ++ +VG VLL +A E
Sbjct: 141 SFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAVLLGDDAQE------ 194
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
F+L+++ + + + Y+ A P L+A S
Sbjct: 195 -------FKLTQLLYMPVLEQLLLGQAETDAYR--------AMFAKVRPHFATLKAASQP 239
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
T ++ L +Q E + W+ S +LG + +R T D +K
Sbjct: 240 ----TLSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAEMTADMVKNQ 295
Query: 368 YKVRNEMRAALQRLLKDDKILVIPTV-SDPPLKLNTKKTYSA--EFHDRTLVLSSIGSMS 424
R + ++ + +L +PTV PL + A E R L LS + +S
Sbjct: 296 RARRARFAEEFEAIIGESAVLALPTVPGAAPLTGEPFEALQAYREQALRLLCLSGLSGLS 355
Query: 425 GCCQVAIPIGK------YNEHPISISFITYHGGDKFLL 456
G Q+ +P+G ++ P ISFI G D+ L+
Sbjct: 356 GLPQITLPLGSLRPGGTMHDAPFGISFIGPRGSDRTLI 393
>gi|225628576|ref|ZP_03786610.1| amidase [Brucella ceti str. Cudo]
gi|261219970|ref|ZP_05934251.1| amidase [Brucella ceti B1/94]
gi|261756331|ref|ZP_06000040.1| amidase [Brucella sp. F5/99]
gi|225616422|gb|EEH13470.1| amidase [Brucella ceti str. Cudo]
gi|260918554|gb|EEX85207.1| amidase [Brucella ceti B1/94]
gi|261736315|gb|EEY24311.1| amidase [Brucella sp. F5/99]
Length = 401
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 127/397 (31%), Positives = 195/397 (49%), Gaps = 35/397 (8%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA PLAG + A+KD++D+ G VTG G+P + A ++A VV LL GA IGK
Sbjct: 21 AASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEFIGKAQ 80
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
DE AF + G+N HY P+NP P + GGSSSGSA AVA +L D ALG+DT G +R PA
Sbjct: 81 TDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGSIRTPA 140
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
SFCG++G R +HG + + G++P + SLDT+G AR+ ++ +VG VLL +A E
Sbjct: 141 SFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAVLLGDDAQE------ 194
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
F+L+++ + + + Y+ A P L+A S
Sbjct: 195 -------FKLTQLLYMPVLEQLLLGQAETDAYR--------AMFAKVRPHFATLKAASQP 239
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
T ++ L +Q E + W+ S +LG + +R T D +K
Sbjct: 240 ----TLSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAEMTADMVKNQ 295
Query: 368 YKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSA--EFHDRTLVLSSIGSMSG 425
R + ++ + +L +PTV P T + + A + ++ L L + +SG
Sbjct: 296 RARRARFAEEFEAIIGESAVLALPTV--PGAAPLTGEPFEALQAYREQALRLLCLSGLSG 353
Query: 426 CCQVAIPIGK------YNEHPISISFITYHGGDKFLL 456
Q+ +P+G ++ ISFI G D+ L+
Sbjct: 354 LPQITLPLGSLRPGGTMHDASFGISFIGPRGSDRTLI 390
>gi|152966046|ref|YP_001361830.1| amidase [Kineococcus radiotolerans SRS30216]
gi|151360563|gb|ABS03566.1| Amidase [Kineococcus radiotolerans SRS30216]
Length = 546
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/400 (30%), Positives = 184/400 (46%), Gaps = 36/400 (9%)
Query: 65 PPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIG 124
P A PL G++ A+KD+ V G TG G P W A + LL GA G
Sbjct: 158 PAGAGTGPLTGIRVAVKDLVAVAGQRTGGGVPRWLEQARTEPVNAPALQALLDAGAGIAG 217
Query: 125 KTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVR 184
DE AF + G N H+G P NP P +PGGSSSG A AVA+ D LGTDT G +R
Sbjct: 218 IAQTDELAFSLLGVNAHHGVPPNPAAPGRVPGGSSSGCAAAVASGTADLGLGTDTAGSLR 277
Query: 185 VPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRR 244
VP SF G+ +RP+HG V GVLP + + DTVGLLAR+A +L LL P R
Sbjct: 278 VPGSFSGLYAWRPTHGAVDAAGVLPLAPTFDTVGLLARDAGVLAVAAAALLTGPTHPPAR 337
Query: 245 ARRLIFADDIFQLSKVPKLKTIHVISKAIESLSG--YQNPEHMNV---GQYIASNVPSLK 299
R L+ + +FQ+++ + +A+ +G ++ + + V G+ + + + +
Sbjct: 338 PRALLRSRTLFQVAEPATALAVEAALRALAVQTGLPLRDVDDVGVDFTGEEVTAWTTAFR 397
Query: 300 GLRAQSTSPENG---TATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEA 356
++A +G TA ALS + A+ R G V L A
Sbjct: 398 TVQAAEAWASHGAFITANPGALSPAV-----------------EARFRAGEGVGAETLNA 440
Query: 357 INTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLV 416
TT + RA L +L+ L +P+ + P ++ TL
Sbjct: 441 ARTTIE----------ATRARLTAVLR-GGWLCLPSTATPAPRIEATPDRFEAVRAGTLP 489
Query: 417 LSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
L+++ S +G + +P G+ + P+ + + HG D+ LL
Sbjct: 490 LTTLASQTGVPALNLPWGRVGDLPVGLCVLAPHGQDRSLL 529
>gi|149204307|ref|ZP_01881274.1| Amidase [Roseovarius sp. TM1035]
gi|149142192|gb|EDM30239.1| Amidase [Roseovarius sp. TM1035]
Length = 364
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/385 (30%), Positives = 181/385 (47%), Gaps = 33/385 (8%)
Query: 76 LKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGI 135
++ +KD FD+ G+VTG G P+W + H A T+ VV +LL +GA IGKT +DE A+ +
Sbjct: 1 MRVGVKDGFDIAGHVTGAGCPEWGQFHGAATATSPVVQVLLDSGAEIIGKTQMDELAYSL 60
Query: 136 TGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGY 195
G N YGTP+NP +PGGSSSGSA +VAA LVD LG+DT G VR+PASFCG+ G+
Sbjct: 61 MGVNARYGTPLNPAAQDRVPGGSSSGSAASVAAGLVDIGLGSDTGGSVRLPASFCGVYGW 120
Query: 196 RPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNA-VEPRRARRLIFADDI 254
RP+HG +S ++P + S DT G R+ + V V A V+P + D+
Sbjct: 121 RPTHGLMSGDSLVPLAPSYDTPGFFTRDLMTMATVASVFQDAPATVKP---IKFWLPSDL 177
Query: 255 FQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTAT 314
+ L++ V + +P + R+ P+
Sbjct: 178 WSLAE-------------------------SGVSAALRDALPVVD-HRSDPILPDG---D 208
Query: 315 LKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNEM 374
L Q YE W+ +P G + ER A T+ + + R +
Sbjct: 209 LSDWLGAFRIHQGYEIWQTLGPWITQNQPDFGPGIRERFETASRITRQDFDSAVEKRCAI 268
Query: 375 RAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIG 434
R L++ + ILV PT +T+++ F + L + + +G Q++IP+
Sbjct: 269 REHLEKAIDPATILVFPTSPGAAPLRSTQQSDLELFRNAALTMLCVAGHAGLPQISIPLA 328
Query: 435 KYNEHPISISFITYHGGDKFLLDTV 459
Y P+ +S G D L+ T
Sbjct: 329 TYTGAPVGLSLAGAKGADHLLIKTA 353
>gi|261215607|ref|ZP_05929888.1| amidase [Brucella abortus bv. 3 str. Tulya]
gi|260917214|gb|EEX84075.1| amidase [Brucella abortus bv. 3 str. Tulya]
Length = 401
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 126/397 (31%), Positives = 195/397 (49%), Gaps = 35/397 (8%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA PLAG + A++D++D+ G VTG G+P + A ++A VV LL GA IGK
Sbjct: 21 AASGPLAGERLAVRDIYDIAGMVTGCGNPQILAESPVARKSAPVVEKLLAAGAEFIGKAQ 80
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
DE AF + G+N HY P+NP P + GGSSSGSA AVA +L D ALG+DT G +R PA
Sbjct: 81 TDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGSIRTPA 140
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
SFCG++G R +HG + + G++P + SLDT+G AR+ ++ +V VLL +A E
Sbjct: 141 SFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVCAVLLGDDAQE------ 194
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
F+L+++ + + + Y+ A P L+A S
Sbjct: 195 -------FKLTQLLYMPVLEQLLLGQAETDAYR--------AMFAKVRPHFATLKAASQP 239
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
T ++ L +Q E + W+ S +LG + +R T D +K
Sbjct: 240 ----TLSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAEMTADMVKNQ 295
Query: 368 YKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSA--EFHDRTLVLSSIGSMSG 425
R + ++ + +L +PTV P T + + A + ++ L L + +SG
Sbjct: 296 RARRARFAEEFEAIIGESAVLALPTV--PGAAPLTGEPFEALQAYREQALRLLCLSGLSG 353
Query: 426 CCQVAIPIGK------YNEHPISISFITYHGGDKFLL 456
Q+ +P+G ++ P ISFI G D+ L+
Sbjct: 354 LPQITLPLGSLRPGGTMHDAPFGISFIGPRGSDRTLI 390
>gi|163844297|ref|YP_001621952.1| amidase [Brucella suis ATCC 23445]
gi|163675020|gb|ABY39130.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
Length = 401
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 133/416 (31%), Positives = 205/416 (49%), Gaps = 37/416 (8%)
Query: 51 AFLERFE-LIPFPQPP-PPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERT 108
A+L+ F LI P+ P AA PLAG + A+KD++D+ G VTG G+P + A ++
Sbjct: 2 AYLDPFNALIAKPEKPLAHAASGPLAGERLAVKDIYDIAGMVTGCGNPQILAESPVARKS 61
Query: 109 AVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAA 168
A VV LL GA IGK DE AF + G+N HY P+NP P + GGSSSGSA AVA
Sbjct: 62 APVVEKLLAAGAEFIGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAG 121
Query: 169 QLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILH 228
+L + ALG+DT G +R PASFCG++G R +HG + + G++ + SLDT+G AR+ ++
Sbjct: 122 KLANIALGSDTGGSIRTPASFCGLIGLRSAHGRIPLEGIMSLAPSLDTIGWFARDIALYE 181
Query: 229 RVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVG 288
+VG VLL +A E F+L+++ + + + Y+
Sbjct: 182 KVGAVLLGDDAQE-------------FKLTQLLYMPVLEQLLLGQAETDAYR-------- 220
Query: 289 QYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYN 348
A P L+A S T ++ L +Q E + W+ S +LG
Sbjct: 221 AMFAKVRPHFATLKAASQP----TLSIDELYLAFRQIQGAEPWENHGAWISSGNRQLGPG 276
Query: 349 VFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSA 408
+ +R T D +K R + ++ + +L +PTV P T + + A
Sbjct: 277 IADRFAYGAEMTADMVKNQRARRARFAEEFEAIIGESAVLALPTV--PGAAPLTGEPFEA 334
Query: 409 --EFHDRTLVLSSIGSMSGCCQVAIPIGK------YNEHPISISFITYHGGDKFLL 456
+ ++ L L + +SG Q+ +P+G ++ P ISFI G D+ L+
Sbjct: 335 LQAYREQALRLLCLSGLSGLPQITLPLGSLRPGGTMHDAPFGISFIGPRGSDRTLI 390
>gi|407687341|ref|YP_006802514.1| amidase [Alteromonas macleodii str. 'Balearic Sea AD45']
gi|407290721|gb|AFT95033.1| amidase [Alteromonas macleodii str. 'Balearic Sea AD45']
Length = 409
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 194/387 (50%), Gaps = 27/387 (6%)
Query: 67 PAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKT 126
P A++PL GL A+KD+F ++G T G+PDW H E T+ V +L+ GA GKT
Sbjct: 36 PKAQKPLCGLGLAVKDLFHIQGLPTSAGNPDWLATHSIPENTSSCVAKMLQAGAVFKGKT 95
Query: 127 VLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
+ DE A+ + G+NKHY T VNP P+HIPGGSSSGSAVAV+A L D LGTDT G +RVP
Sbjct: 96 ITDELAYSLHGQNKHYETLVNPAAPAHIPGGSSSGSAVAVSAHLADIGLGTDTGGSIRVP 155
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ-LNAVEPRRA 245
+S+ G+ G R +HG V+ ++ + S DTVG + R+ L +V +V + +E
Sbjct: 156 SSYQGLWGLRTTHGVVACDNMVALAPSFDTVGWMTRDLDTLTKVSNVCIDSATQIEISGT 215
Query: 246 RRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQS 305
R A +F+ + L + + A +N + + + + L L+ +
Sbjct: 216 PRFGIAAHLFEQAAHKSLCKTWLAALA-------ENNDCITLSETQL----DLDTLQTAA 264
Query: 306 TSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIK 365
T +LQ E + EW+++ +P + ++ R+ T N++
Sbjct: 265 T---------------FRTLQGNEIWQQHGEWIENTQPDIAKDIVLRLNWCKAITTQNVQ 309
Query: 366 ILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSG 425
++ + L L +D +L+IPT + + +T A + L L++I ++G
Sbjct: 310 QAKAQQSVVINHLNALFEDIDVLIIPTTPGVAPRCDADETTLANDRNALLALTAIAGLAG 369
Query: 426 CCQVAIPIGKYNEHPISISFITYHGGD 452
Q+ +P+ + P +S + G D
Sbjct: 370 LPQLHLPLFTLHNAPCGLSLVGKKGND 396
>gi|406904039|gb|EKD45935.1| Amidase family protein [uncultured bacterium]
Length = 517
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 146/444 (32%), Positives = 215/444 (48%), Gaps = 44/444 (9%)
Query: 31 LAETLRRRRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYV 90
+ E +R R + K N + G F E F++ P+A+ L L FA+KD D+ GY
Sbjct: 62 ILEEVRDRVDAKNN--ISAGIFTESFKI-------EPSAQGKLNNLTFAVKDSIDICGYK 112
Query: 91 TGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQM 150
+G GSP W H +A AV V LL +GA C GKTV+ E G+TG N+ + NP+
Sbjct: 113 SGCGSPLWLESHSKAVVNAVCVDQLLYSGAACCGKTVMGELGCGLTGINRFFKLVPNPKF 172
Query: 151 PSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPN 210
+HIPGGSSSGSA AVAA +VDF+LGTD G +RVPAS+CG+ G RPS +S+ GV
Sbjct: 173 STHIPGGSSSGSAAAVAAGIVDFSLGTDAGGSIRVPASYCGVFGMRPSCEIMSLAGVSCL 232
Query: 211 SQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVIS 270
S S +TVG+ A + ++ +V VL+ +N + + DD+ TI+V+
Sbjct: 233 SPSFETVGIFANDIDVIDKVLSVLVPINFTKGSKKE-----DDV---------GTIYVLK 278
Query: 271 KAIESL-----SGYQNPEHMNVGQYIASNVPSLKGL-RAQSTSPENGTA-TLKALSSVML 323
+ L +G+ + YI V + A+ E G A T K +
Sbjct: 279 DCFDLLEDDLKNGFYGYIEILKNNYIGDVVEITSNMIDAEVYDSEQGWANTFKTIFC--- 335
Query: 324 SLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAIN-TTQDNIKILYKVRNEMRAALQRLL 382
YE WV+SA+ G N + N + + + K R + L
Sbjct: 336 ----YEAWNSLSPWVESARLEFGKNTYVDFSALRNHVARSKLDVAIKQREIQFHKINSFL 391
Query: 383 KDDKILVIPTV-SDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPI 441
+ + IPT S P + KT F R +S++G + Q+++P+ ++ PI
Sbjct: 392 YPNNLFCIPTTPSIAPRRNGDVKTEYPNF-TRLHSISNVGRLP---QISVPLFG-DKTPI 446
Query: 442 SISFITYHGGDKFLLDTVLDLYDS 465
+SFI H D LL TV L ++
Sbjct: 447 GLSFIGAHRSDFNLLATVKKLKET 470
>gi|440286737|ref|YP_007339502.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Enterobacteriaceae bacterium strain FGI 57]
gi|440046259|gb|AGB77317.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Enterobacteriaceae bacterium strain FGI 57]
Length = 373
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 128/387 (33%), Positives = 188/387 (48%), Gaps = 51/387 (13%)
Query: 76 LKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGI 135
L+FA+KD D+ G+ T G P D +A++ A +V +LL +G GKT L E AFG+
Sbjct: 21 LRFAVKDTLDIAGHPTRAGCPALA-DAPKAKQHARIVKVLLNSGCQLTGKTTLHELAFGV 79
Query: 136 TGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGY 195
TG N GTPVNPQ P+ IPGGSSSGSA VA VDFALGTDT G VR+PA+ CG+LG
Sbjct: 80 TGINPWSGTPVNPQYPTLIPGGSSSGSATVVANGDVDFALGTDTGGSVRMPAACCGVLGL 139
Query: 196 RPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRV-GHVLLQLNA-VEPRRARRLIFADD 253
+P +G +S GVLP SLD VG+ AR IL V V L ++A +E A IFA
Sbjct: 140 KPGYGVLSRQGVLPAYSSLDCVGIFAREPRILREVLARVALPVDAPLESLPAIGFIFAAQ 199
Query: 254 IFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTA 313
P + + V A+E+L IA+N T P G A
Sbjct: 200 -------PDIDALLV--DALEALG-------------IAAN---------SVTLPLLGEA 228
Query: 314 TLKALSSVMLSLQRYEFKTIYEEWVK----SAKPRLGYNVFERVLEAINTTQDNIKILYK 369
L+ + E W+ A + +V R+ + T + +
Sbjct: 229 HRAGLTIIN-----------RENWLAFNALLASHAVSPDVASRIQAGESITSEQLASAEN 277
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
VR + A + LL++ +L + T+ + P L + + + LV ++SG +
Sbjct: 278 VRTQFTAQVNALLEETPLLALATLPELPPTLEEAEDPLSVVNLTRLVRPF--NLSGHPAL 335
Query: 430 AIPIGKYNEHPISISFITYHGGDKFLL 456
++P+G+ P+++ + G + L+
Sbjct: 336 SLPMGELQGRPVALQLVAGFGEEGLLV 362
>gi|148259263|ref|YP_001233390.1| amidase [Acidiphilium cryptum JF-5]
gi|146400944|gb|ABQ29471.1| Amidase [Acidiphilium cryptum JF-5]
Length = 389
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 101/161 (62%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAGL +KD+FD+ G VT FG+PDW R A A +V+ LL+ GA GKT E
Sbjct: 28 PLAGLDVVVKDLFDIAGEVTAFGNPDWGRHFGPALSHAWIVSQLLEAGARVTGKTTTVEL 87
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
AFG+ G N HYGTP+NP P +PGGSSSGS VA+ +G+DT G VR+PAS+CG
Sbjct: 88 AFGLEGRNTHYGTPLNPAAPDRLPGGSSSGSVAMVASGRAHVGVGSDTGGSVRIPASYCG 147
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGH 232
+ G RP+ G +S+ G P + S DT G R+A + RVG
Sbjct: 148 LYGLRPTQGLLSLAGAAPLAPSFDTPGWFTRDAETMLRVGE 188
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 49/114 (42%)
Query: 337 WVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDP 396
++++ KP L R+ T + R A + LL +LVIPT P
Sbjct: 261 FIETVKPLLDPVTAGRIAATRGFTAEAAAEGRVARRAHTARMHALLAGGAVLVIPTSPCP 320
Query: 397 PLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHG 450
+ ++ + RTL + I + +G ++ IP+GK N P+ +S I G
Sbjct: 321 APPVAAEQAVYEDVRTRTLRVGIIAAFAGLPELTIPVGKVNGAPVGLSLIAGPG 374
>gi|424815583|ref|ZP_18240734.1| amidase [Escherichia fergusonii ECD227]
gi|325496603|gb|EGC94462.1| amidase [Escherichia fergusonii ECD227]
Length = 373
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 126/386 (32%), Positives = 183/386 (47%), Gaps = 49/386 (12%)
Query: 76 LKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGI 135
L+FA+KD D+ G T G P D +A++ A +V +LL +G GKT L E AFG+
Sbjct: 21 LRFAVKDTLDIAGRPTRAGCPALA-DAPKAKQHARIVKVLLNSGCQLTGKTTLHELAFGV 79
Query: 136 TGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGY 195
TG N GTPVNPQ P+ IPGGSSSGSA VA VDFALGTDT G VR+PA+ CG+LG
Sbjct: 80 TGINPWSGTPVNPQYPALIPGGSSSGSATVVARGDVDFALGTDTGGSVRMPAACCGVLGL 139
Query: 196 RPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIF 255
+P +G +S GVLP SLD VG+ AR IL V RL D
Sbjct: 140 KPGYGVLSRQGVLPAYSSLDCVGIFAREPRILRDV--------------LTRLALPVDA- 184
Query: 256 QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQS-TSPENGTAT 314
L +P + I I++L + + +L G+ A S T P G A
Sbjct: 185 PLDSLPAIGFIFAAQPDIDAL--------------LVDTLEAL-GIAANSVTLPLLGEAH 229
Query: 315 LKALSSVMLSLQRYEFKTIYEEWVK----SAKPRLGYNVFERVLEAINTTQDNIKILYKV 370
L+ + E W+ A + +V R+ + T D + V
Sbjct: 230 RAGLTIIN-----------RENWLAFNALLASHAVSPDVASRIQAGESITSDQLASAENV 278
Query: 371 RNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVA 430
R + A + LL+D +L + T+ + P L + + + LV ++SG ++
Sbjct: 279 RAQFTAQVNALLEDTPLLALATLPELPPTLEEAEDPLSVVNLTRLVRPF--NLSGHPAIS 336
Query: 431 IPIGKYNEHPISISFITYHGGDKFLL 456
+P+G+ P+++ + G + L+
Sbjct: 337 LPMGELQGRPVALQLVAGFGEEGLLV 362
>gi|328875581|gb|EGG23945.1| hypothetical protein DFA_06083 [Dictyostelium fasciculatum]
Length = 396
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 125/401 (31%), Positives = 198/401 (49%), Gaps = 56/401 (13%)
Query: 76 LKFAIKDVFDVKGYVT-----GFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
L+F +KD DVKGY + F S D ++H E +V LL G +GKT + E
Sbjct: 29 LEFGVKDTIDVKGYQSKACCRAFESVDVAKEHAE------IVERLLNAGCRVVGKTNMHE 82
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
A+G+TG N++ GTP N + P +PGGSSSGSA AVA + DFALGTDT G VR+PA+
Sbjct: 83 MAYGLTGINEYTGTPDNLKYPGIVPGGSSSGSATAVAHSMCDFALGTDTGGSVRIPAACT 142
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIF 250
G+ G +P+HG VS IGV P SLD VG AR+ + + +VL +LN + A++L+
Sbjct: 143 GVFGLKPTHGAVSRIGVHPPHSSLDCVGFFARD---IDTIINVLERLNP-QDLDAKQLL- 197
Query: 251 ADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPEN 310
++K+PK L+G N + ++ I S + SL + A+ + E
Sbjct: 198 ------ITKLPKFGV----------LTGLANVQE-DIDNLIKSKLTSL--VAAKQANGEG 238
Query: 311 GTATLKALSSVMLSLQRYEFKTIYEEWVK-----------SAKPRLGYNVFERVLEAINT 359
G V ++LQ +++ V + R+ +V R+ N
Sbjct: 239 GEI-------VPITLQDNTHDQVFQAGVNIIAFENYSAYANILDRVSPDVASRLGHGKNV 291
Query: 360 TQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLV-LS 418
T + + K R + + +LL+ I+ +PT+ P L ++ + F L L
Sbjct: 292 TSNILADSEKTRTQFTEQIDQLLQSTPIIALPTL--PVLPPTVEEVSNGSFQVMQLSRLV 349
Query: 419 SIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTV 459
+++G ++IP G+ + P+++ IT G + +L V
Sbjct: 350 RPFNVTGHPAISIPFGEISNRPVALQLITSKGNELYLCKVV 390
>gi|110635048|ref|YP_675256.1| amidase [Chelativorans sp. BNC1]
gi|110286032|gb|ABG64091.1| Amidase [Chelativorans sp. BNC1]
Length = 395
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 126/385 (32%), Positives = 187/385 (48%), Gaps = 27/385 (7%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L GL F +KD++DV GY TG G+P + + ++ + LL GA GKT DE A
Sbjct: 27 LRGLSFGVKDIYDVAGYPTGCGNPQKEAERGPVSHSSPAIQALLDAGAAFAGKTQTDELA 86
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
F + G N H+ PVNP+ P + GGSSSGSA AVA L DFA+G+DT G VR+PASFCG+
Sbjct: 87 FSMMGMNAHFPPPVNPRAPERVTGGSSSGSAAAVAGGLADFAIGSDTNGSVRIPASFCGL 146
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
+G R +HG +SM G +P + S DT G AR+A VG VLL +
Sbjct: 147 IGLRTTHGRISMEGAMPLAPSFDTFGWFARDARTYEAVGEVLL---------------GE 191
Query: 253 DIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGT 312
D + L++ IS+ L G E G+ + + P
Sbjct: 192 DFHGGT----LRSPVRISEFEARLFG--QAESAAYGEMLGRVLDHFGKSAGYVALP---- 241
Query: 313 ATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRN 372
++ L +Q +E ++ LG V ER + + + + + R
Sbjct: 242 GEIEDLYECFRQIQAHEAWLSQAYFLSQQDRELGPGVKERFAYGRSISDETAENARRRRR 301
Query: 373 EMRAALQRLLKDDKILVIPTV-SDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAI 431
E +A L++ D ++V+PT S PLK+ T + + H R L L+ I + G Q++I
Sbjct: 302 EFQADFNALMRPDMVVVMPTQPSAAPLKIATLEEQESYRH-RGLALTCIAGLLGWPQISI 360
Query: 432 PIGKYNEHPISISFITYHGGDKFLL 456
P+G+ + P IS + G D+ L+
Sbjct: 361 PLGEVHGAPFGISLLGPAGSDRQLI 385
>gi|407699706|ref|YP_006824493.1| amidase [Alteromonas macleodii str. 'Black Sea 11']
gi|407248853|gb|AFT78038.1| amidase [Alteromonas macleodii str. 'Black Sea 11']
Length = 409
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 192/387 (49%), Gaps = 27/387 (6%)
Query: 67 PAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKT 126
P A++PL GL A+KD+F ++G T G+PDW H E T+ V +L+ GA GKT
Sbjct: 36 PKAQKPLCGLGLAVKDLFHIQGLPTSAGNPDWLATHSIPENTSSCVAKMLQAGAVFKGKT 95
Query: 127 VLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
+ DE A+ + G+NKHY T VNP P+HIPGGSSSGSAVAV+A L D LGTDT G +RVP
Sbjct: 96 ITDELAYSLHGQNKHYETLVNPVAPAHIPGGSSSGSAVAVSAHLADIGLGTDTGGSIRVP 155
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ-LNAVEPRRA 245
+S+ G+ G R +HG V+ ++ + S DTVG + R+ L +V +V + E
Sbjct: 156 SSYQGLWGLRTTHGVVACDNMVALAPSFDTVGWMTRDLDTLTKVSNVCIDSATQSEISGT 215
Query: 246 RRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQS 305
R A +F+ + L + + A +N + + + + L L+ +
Sbjct: 216 PRFGIAAHLFEQAAHKSLCKTWLAALA-------ENNDCITLSETQL----DLDTLQTAA 264
Query: 306 TSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIK 365
T +LQ E + EW+++ +P + ++ R+ T ++
Sbjct: 265 T---------------FRTLQGNEIWQQHGEWIENTQPDIAKDIMLRLDWCKTITTQEVQ 309
Query: 366 ILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSG 425
++ + L L +D +LVIPT + + +T A + L L++I ++G
Sbjct: 310 QAKAQQSVVINHLNALFEDIDVLVIPTTPGVAPRCDADETTLANDRNTLLALTAISGLAG 369
Query: 426 CCQVAIPIGKYNEHPISISFITYHGGD 452
Q+ +P+ + P +S + G D
Sbjct: 370 LPQLHLPLFTLHNAPCGLSLVGKKGND 396
>gi|359400155|ref|ZP_09193145.1| amidase [Novosphingobium pentaromativorans US6-1]
gi|357598478|gb|EHJ60206.1| amidase [Novosphingobium pentaromativorans US6-1]
Length = 400
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/390 (31%), Positives = 179/390 (45%), Gaps = 25/390 (6%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAG + IKD+F V GY G G+P W A V L GA IG DE A
Sbjct: 31 LAGSQTVIKDLFAVAGYGIGAGNPTWLEQAPVETANAWAVQQWLDAGADVIGIAHTDELA 90
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
++G N HYGTP+N + P IPGGSSSGSA AVAA LV +A+ TDT G RVPAS+CGI
Sbjct: 91 LSLSGTNVHYGTPLNTRAPGRIPGGSSSGSAAAVAAGLVPYAMATDTGGSTRVPASYCGI 150
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G R +HG V + G++P + D VG+LA + + L R LL A +P AR L+ A
Sbjct: 151 FGIRTTHGRVPVDGLVPLAPRFDAVGVLASSGAWLARATGPLLPDFAEKP-AARCLVVAT 209
Query: 253 DIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGT 312
D+ L+ + KA+ +H+++ TS +G
Sbjct: 210 DVLALADRNAADAVDDAVKAVA--------KHLDI--------------ETVRTSFADG- 246
Query: 313 ATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRN 372
L+ L+ Q E + EW++ KP+ G + R A +
Sbjct: 247 -RLQEWKDAFLARQPVEVWKTHGEWIEGNKPKFGPGIGLRFEMASKADPARANLADMAAE 305
Query: 373 EMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIP 432
++ AA ++ + +L T S +L DRT+ ++ I ++G V++P
Sbjct: 306 QILAAFEKHVPPGGVLAFATASGAAPQLELPAPEKQSLRDRTIAMTCIAGLAGLPAVSLP 365
Query: 433 IGKYNEHPISISFITYHGGDKFLLDTVLDL 462
+ P+ + + G D+ LL T L
Sbjct: 366 VASVEGLPLGLCLLARRGEDETLLATAAAL 395
>gi|218548177|ref|YP_002381968.1| amidase [Escherichia fergusonii ATCC 35469]
gi|218355718|emb|CAQ88330.1| putative amidase [Escherichia fergusonii ATCC 35469]
Length = 376
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 125/386 (32%), Positives = 179/386 (46%), Gaps = 49/386 (12%)
Query: 76 LKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGI 135
L+FA+KD D+ G T G P D +A++ A +V +LL +G GKT L E AFG+
Sbjct: 24 LRFAVKDTLDIAGRPTRAGCPALA-DAPKAKQHARIVKVLLNSGCQLTGKTTLHELAFGV 82
Query: 136 TGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGY 195
TG N GTPVNPQ P+ IPGGSSSGSA VA VDFALGTDT G VR+PA+ CG+LG
Sbjct: 83 TGINPWSGTPVNPQYPALIPGGSSSGSATVVARGDVDFALGTDTGGSVRMPAACCGVLGL 142
Query: 196 RPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIF 255
+P +G +S GVLP SLD VG+ AR IL V RL D
Sbjct: 143 KPGYGVLSRQGVLPAYSSLDCVGIFAREPRILRDV--------------LTRLALPVDA- 187
Query: 256 QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTATL 315
L +P + I I++L V +L+ L + S TL
Sbjct: 188 PLDSLPAIGFIFAAQPDIDALL-----------------VDALEALGIAANS-----VTL 225
Query: 316 KALSSVMLSLQRYEFKTI-YEEWVK----SAKPRLGYNVFERVLEAINTTQDNIKILYKV 370
L R I E W+ A + +V R+ + T D + V
Sbjct: 226 PLLGEA----HRAGLTIINRENWLAFNALLASHAVSPDVASRIQAGESITSDQLASAENV 281
Query: 371 RNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVA 430
R + + LL+D +L + T+ + P L + + + LV ++SG ++
Sbjct: 282 RVQFTGQVNALLEDTPLLALATLPELPPTLEEAEDPLSVVNLTRLVRPF--NLSGHPAIS 339
Query: 431 IPIGKYNEHPISISFITYHGGDKFLL 456
+P+G+ P+++ + G + L+
Sbjct: 340 LPMGELQGRPVALQLVAGFGEEGLLV 365
>gi|338980776|ref|ZP_08632030.1| Amidase [Acidiphilium sp. PM]
gi|338208301|gb|EGO96170.1| Amidase [Acidiphilium sp. PM]
Length = 389
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 100/161 (62%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAGL +KD+FD+ G VT FG+PDW R A A +V+ LL+ GA GKT E
Sbjct: 28 PLAGLDVVVKDLFDIAGEVTAFGNPDWGRHFGPALSHAWIVSQLLEAGARVTGKTTTVEL 87
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
AFG+ G N HYGTP+NP P +PGGSSSGS VA+ +G+DT G VR+PAS+CG
Sbjct: 88 AFGLEGRNTHYGTPLNPAAPDRLPGGSSSGSVAMVASGRAHVGVGSDTGGSVRIPASYCG 147
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGH 232
+ G RP+ G +S+ G P + S DT G +A + RVG
Sbjct: 148 LYGLRPTQGLLSLAGAAPLAPSFDTPGWFTCDAETMLRVGE 188
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 49/114 (42%)
Query: 337 WVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDP 396
++++ KP L R+ T + R A + LL +LVIPT P
Sbjct: 261 FIETVKPLLDPVTAGRIAATRGFTAEAAAEGRVARRAHTARMHALLAGGAVLVIPTSPCP 320
Query: 397 PLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHG 450
+ ++ + RTL + I + +G ++ IP+GK N P+ +S I G
Sbjct: 321 APPVAAEQAVYEDVRTRTLRVGIIAAFAGLPELTIPVGKVNGAPVGLSLIAGPG 374
>gi|422806355|ref|ZP_16854787.1| amidase [Escherichia fergusonii B253]
gi|324112893|gb|EGC06869.1| amidase [Escherichia fergusonii B253]
Length = 373
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 125/386 (32%), Positives = 182/386 (47%), Gaps = 49/386 (12%)
Query: 76 LKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGI 135
L+FA+KD D+ G T G P D +A++ A +V +LL +G GKT L E AFG+
Sbjct: 21 LRFAVKDTLDIAGRPTRAGCPALA-DAPKAKQHARIVKVLLNSGCQLTGKTTLHELAFGV 79
Query: 136 TGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGY 195
TG N GTPVNPQ P+ IPGGSSSGSA VA VDFALGTDT G VR+PA+ CG+LG
Sbjct: 80 TGINPWSGTPVNPQYPALIPGGSSSGSATVVARGDVDFALGTDTGGSVRMPAACCGVLGL 139
Query: 196 RPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIF 255
+P +G +S GVLP SLD VG+ AR IL V RL D
Sbjct: 140 KPGYGVLSRQGVLPAYSSLDCVGIFAREPRILRDV--------------LTRLALPVDA- 184
Query: 256 QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQS-TSPENGTAT 314
L +P + I I++L + + +L G+ A S T P G A
Sbjct: 185 PLDSLPAIGFIFAAQPDIDAL--------------LVDALEAL-GIAANSVTLPLLGEAH 229
Query: 315 LKALSSVMLSLQRYEFKTIYEEWVK----SAKPRLGYNVFERVLEAINTTQDNIKILYKV 370
L+ + E W+ A + +V R+ + T D + V
Sbjct: 230 RAGLTIIN-----------RENWLAFNALLASHAVSPDVASRIQAGESITSDQLASAENV 278
Query: 371 RNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVA 430
R + + LL+D +L + T+ + P L + + + LV ++SG ++
Sbjct: 279 RVQFTGQVNALLEDTPLLALATLPELPPTLEEAEDPLSVVNLTRLVRPF--NLSGHPALS 336
Query: 431 IPIGKYNEHPISISFITYHGGDKFLL 456
+P+G+ P+++ + G + L+
Sbjct: 337 LPMGELQGRPVALQLVAGFGEEGLLV 362
>gi|209546084|ref|YP_002277974.1| amidase [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209538941|gb|ACI58874.1| Amidase [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 386
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 119/391 (30%), Positives = 191/391 (48%), Gaps = 42/391 (10%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L GL+ A+KD+FDV GY T G+ TA +V LL+ GA +GKT DE A
Sbjct: 24 LFGLRLAVKDLFDVAGYPTAAGNAAVLVASGIKRATAPLVQTLLEAGACFVGKTNTDELA 83
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+ + G N H+G P+NP+ P+ IPGGSSSGSAVAVAA L D LGTDT G +R+PA+ G+
Sbjct: 84 YSLIGGNIHFGMPINPRDPTLIPGGSSSGSAVAVAAGLADLGLGTDTSGSIRLPAAINGL 143
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARN----ASILHRVGHVLLQLNAVEPRRARRL 248
+G+RP+HG++ + P + S D G + R+ A+++ VG + A R L
Sbjct: 144 IGWRPTHGSLDNRALRPLAPSFDVPGFMTRSLESMAAVMSAVG-----MPAANDRPISIL 198
Query: 249 IFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSP 308
I +DIF E++ G E IAS + +R
Sbjct: 199 I-PEDIF------------------ETIDGTIADE------MIASIRSAAMPIRRIDFIS 233
Query: 309 ENGTATLKALSSVMLSLQRYEF-KTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
A L + +L + +E KT++E + P ++ R+ ++
Sbjct: 234 SFSLADLAVAFTTILQKEAWESNKTLFERSPDAIAP----DIAARLRAGSRLDDGEMREA 289
Query: 368 YKVRNEMRAALQRLLKDDKILVIPTVS-DPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGC 426
++R ++RLL ++ ++ +PT++ +PP + ++++A F + L + +SGC
Sbjct: 290 RRIRTLFSGEIERLLCENMVIALPTLAMNPPTRDAGPESFAA-FRSACIKLLCLAGLSGC 348
Query: 427 CQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
Q+A PI + S+S D L++
Sbjct: 349 PQLAFPIASRVGN-ASLSLFGARSTDSLLMN 378
>gi|332141007|ref|YP_004426745.1| amidase [Alteromonas macleodii str. 'Deep ecotype']
gi|327551029|gb|AEA97747.1| amidase [Alteromonas macleodii str. 'Deep ecotype']
Length = 423
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 186/382 (48%), Gaps = 29/382 (7%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L GL A+KD+F +KG T G+PDW+ H + T V +L GA+ GKT+ DE A
Sbjct: 56 LKGLGLAVKDLFHIKGLPTAAGNPDWQATHDIPQATNTCVATMLNAGASFKGKTITDELA 115
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+ + G+NKHY VNP P+HIPGGSSSGSAVAV+A L D LGTDT G +RVPAS+ G+
Sbjct: 116 YSLHGQNKHYAPLVNPVAPAHIPGGSSSGSAVAVSAHLADIGLGTDTGGSIRVPASYQGL 175
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G R +HG + ++ + S DT+G + R+ L +V H + + I A+
Sbjct: 176 WGLRTTHGLLPCDNMVALAPSFDTIGWMTRDLDTLQKVAHTCID------NTKQSTIKAN 229
Query: 253 DIFQLSKVPKLKTIH--VISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPEN 310
F ++ T H V +K + L+ + + +A L + Q+
Sbjct: 230 PCFGIATPLFANTAHSSVCNKWLTELA--------DNNRCVALTEEQLDLFKLQT----- 276
Query: 311 GTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKV 370
AT + LQ E + EW+++ +P + ++ R+ T ++ +
Sbjct: 277 -AATFRI-------LQGSEIWQQHGEWIETVQPDIAKDIMLRLAWCKTITTQDVTLAKAQ 328
Query: 371 RNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVA 430
+ + + L D +LVIPT + + +T A + L L++I ++G Q+
Sbjct: 329 QKVVIDHINALFNDFDVLVIPTTPGVAPRCDADETTLANDRNALLALTAIAGLAGLPQLH 388
Query: 431 IPIGKYNEHPISISFITYHGGD 452
+P+ + P +S + G D
Sbjct: 389 LPLFTLHNAPCGLSLVGKKGND 410
>gi|152981287|ref|YP_001352460.1| amidase [Janthinobacterium sp. Marseille]
gi|151281364|gb|ABR89774.1| amidase [Janthinobacterium sp. Marseille]
Length = 408
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 104/172 (60%), Gaps = 2/172 (1%)
Query: 50 GAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTA 109
GAFL +P P + L G++FA+KDVFD+ G TG G+P W + A + A
Sbjct: 21 GAFLAEAFGLPLQAHLPLGNK--LEGVRFAVKDVFDIAGTRTGAGNPVWLSGNPAANKHA 78
Query: 110 VVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQ 169
V LL +GA +GKT+ DE + + G N HYG P NP P +PGGSSSGS AVAA
Sbjct: 79 AAVERLLSDGARFVGKTLTDELTYSLAGINAHYGVPRNPASPDRLPGGSSSGSVAAVAAG 138
Query: 170 LVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLA 221
L D ALGTD G VR+PAS+CG+ G RP+HG +S G L + S DTVG A
Sbjct: 139 LADIALGTDCGGSVRLPASYCGVWGMRPTHGRLSGHGCLTLAHSFDTVGWFA 190
>gi|345299640|ref|YP_004828998.1| amidase [Enterobacter asburiae LF7a]
gi|345093577|gb|AEN65213.1| Amidase [Enterobacter asburiae LF7a]
Length = 374
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 179/386 (46%), Gaps = 49/386 (12%)
Query: 76 LKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGI 135
L+FA+KD D+ GY T G P A A VV+ LL+N GKT L E AFG+
Sbjct: 21 LRFAVKDTLDIAGYRTQAGCPALATSP-AAHSHASVVSQLLENRCVLTGKTTLHELAFGV 79
Query: 136 TGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGY 195
TG N GTPVN + P+ IPGGSSSGSA VA+ VDF+LGTDT G VR+PA+ CG++G
Sbjct: 80 TGINPRCGTPVNSRFPALIPGGSSSGSAAVVASGEVDFSLGTDTGGSVRMPAACCGVMGL 139
Query: 196 RPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIF 255
+P +G +S GV+P SLD VG+ R+A++L +V RL D
Sbjct: 140 KPGYGVLSRQGVMPAESSLDCVGVFTRDAAVLRQV--------------MTRLSVPVDA- 184
Query: 256 QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTATL 315
L+ +P + + I++ L L SP+ T L
Sbjct: 185 PLNALPPVAFVLAAEPDIDAC--------------------ILNALSQAGVSPQEITLPL 224
Query: 316 KALSSVMLSLQRYEFKTI-YEEWVK----SAKPRLGYNVFERVLEAINTTQDNIKILYKV 370
+ R I +E W+ A + +V R+ N +++ +++ KV
Sbjct: 225 ------LEEAHRAGLTLISHENWLALGPLLASGAVSPDVASRIRAGANVSREALELAEKV 278
Query: 371 RNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVA 430
R L +L+ +L + T+ + P L + + LV ++SG +
Sbjct: 279 RVAFSEHLDAVLEQTPLLALATLPELPPTLQEAQDPLTVVNLTRLVRPF--NLSGHPAIT 336
Query: 431 IPIGKYNEHPISISFITYHGGDKFLL 456
+P+G+ + P+++ + G D L+
Sbjct: 337 LPVGEIDGRPVALQLVARKGQDGLLV 362
>gi|423121983|ref|ZP_17109667.1| hypothetical protein HMPREF9690_03989 [Klebsiella oxytoca 10-5246]
gi|376393291|gb|EHT05951.1| hypothetical protein HMPREF9690_03989 [Klebsiella oxytoca 10-5246]
Length = 390
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 179/395 (45%), Gaps = 42/395 (10%)
Query: 76 LKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGI 135
L FA KD D+ GY T GSP + V+ LL G GKT L E AFG+
Sbjct: 27 LTFAAKDTLDIAGYPTRAGSPVLQNAPEATAHATVIQQLLDSGGCQLQGKTTLHELAFGV 86
Query: 136 TGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGY 195
TG N GTP+NP+ P+ IPGGSSSGSA VAA VDFA+GTDT G VR+PA+ CGI+G
Sbjct: 87 TGINAWSGTPLNPRYPALIPGGSSSGSATVVAAGEVDFAIGTDTGGSVRMPAACCGIVGL 146
Query: 196 RPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIF 255
+P+ G VS GV+P SLD VG +R+ + L +V
Sbjct: 147 KPTWGRVSRQGVMPADSSLDCVGFFSRDVATLRQV------------------------- 181
Query: 256 QLSKVPK--LKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTA 313
L+++P + A L G+ ++ Q I + + A +T P A
Sbjct: 182 -LARLPGEIAPAVSAHQAATAFLFGHAT---TDIEQLIRARLAQAGMFPADATLPAFAEA 237
Query: 314 TLKALSSVMLSLQRYE-FKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRN 372
L+ ++S + ++ F+++ E KP L +V R+ + + ++R
Sbjct: 238 HQAGLT--VISQENWQAFQSLAE------KPELAEDVAVRLRAGAEISPHQRQAAERIRQ 289
Query: 373 EMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIP 432
A+ L +++PT+ P L + LV ++SG + +P
Sbjct: 290 TFTEAVDAQLARTPFILLPTLPACPPTLEEAANPLNVVNLTRLVRPF--NLSGHPALTLP 347
Query: 433 IGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
+G+ N+ P+++ + D LL L LQ
Sbjct: 348 VGEINQRPVALQIVAGKNKDYELLCFAESLMAKLQ 382
>gi|308804720|ref|XP_003079672.1| amidase family protein (ISS) [Ostreococcus tauri]
gi|116058128|emb|CAL53317.1| amidase family protein (ISS) [Ostreococcus tauri]
Length = 447
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 136/418 (32%), Positives = 191/418 (45%), Gaps = 39/418 (9%)
Query: 66 PPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDW--KRDHHEAERTAVVVTLLLKNGATCI 123
P A L G++ A+KD DV+G G G+P + R A A V +L GA +
Sbjct: 27 PGGAHGALRGMRVAVKDNVDVRGMRAGAGNPTYLETRGREPATAHAPCVDKVLAAGARFV 86
Query: 124 GKTVLDEFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIG 181
GKT +DE A+ + GEN HYGTP N ++P IPGGSSSGSA AV D A+GTDTIG
Sbjct: 87 GKTHMDELAWSLQGENFHYGTPTNARGKIPGRIPGGSSSGSASAVCCGHADVAIGTDTIG 146
Query: 182 CVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVE 241
VR+PASFCG+ G RP+HG V GV+P S S DTVG ++A L +G +LL E
Sbjct: 147 SVRLPASFCGVYGARPTHGRVDATGVVPLSHSFDTVGWFTKDAKTLRVMGEILLD---PE 203
Query: 242 PRRAR--------RLIFADDIFQLSKVPKLK-------TIHVISKAIESLSGYQNPEHMN 286
R A RL D F+L P +K + + + + G P+ M
Sbjct: 204 TRDAETSAKIGRGRLAACSDAFRLVD-PAVKQAMNAVLSSEGVKRVFKDARGDAMPDAMG 262
Query: 287 VGQYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLG 346
+ + S+ L S E + S +Q E + W+K KP G
Sbjct: 263 IVHLVLSD------LALTDKSGERVLPPITEWSETFRVIQTREVWDAHGGWIKEHKPVFG 316
Query: 347 YNVFERVLEA-INTTQDNIKILYKVRNEMRAALQRLLKDDKILVI-------PTVSDPPL 398
+ +R A I + +R + L LL D IL++ P +D
Sbjct: 317 PGIRDRFRAAEIGVDAATMDHHVALRERITNHLDALLADGTILILPAARGPAPAATDYNS 376
Query: 399 KLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+ + KK AE L L + S++ V IP + P+ + ++ G D+ LL
Sbjct: 377 EASLKKL--AEARSVALALGAPASLARLPCVVIPAVEIEGEPVGLMLMSRRGTDEALL 432
>gi|111223659|ref|YP_714453.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Frankia alni ACN14a]
gi|111151191|emb|CAJ62902.1| putative glutamyl-tRNA(Gln) amidotransferase, subunit A [Frankia
alni ACN14a]
Length = 378
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 172/392 (43%), Gaps = 36/392 (9%)
Query: 67 PAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKT 126
P PL GL+ A+KD+F V GY G G+P W + A V L GA G
Sbjct: 12 PTGCGPLDGLRVAVKDLFAVGGYRIGAGNPRWLAEAPVEPVDAQAVRALRAAGAAIAGIA 71
Query: 127 VLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
DE AF ++G N HYGTP NP P +PGGS+SG A AVAA D LGTDT G +RVP
Sbjct: 72 QTDELAFSLSGANVHYGTPPNPAAPDRVPGGSTSGPASAVAAGQADVGLGTDTAGSIRVP 131
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRAR 246
AS CG+ G RP+HGTV GVL + S D VG L + +L VG+VLL A PR A
Sbjct: 132 ASVCGLYGLRPTHGTVGAGGVLGLAPSFDAVGWLTADPGLLRAVGNVLLPPPAGAPRPAA 191
Query: 247 RLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQST 306
RL A + + A+ +L+ + G + ++P L
Sbjct: 192 RLFVAGPL--------------PAAAVGTLTDALGADVRTGGVHELGDIPGLV------- 230
Query: 307 SPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPR-LGYNVFERVLEAINTTQDNIK 365
+ +Q E ++ W+ +A PR LG +V ER +
Sbjct: 231 -------------AAFRVVQAAEAWRLHGAWI-TAHPRALGADVEERFRFGAGVDAGAER 276
Query: 366 ILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSG 425
+ + RA L L D LV+P P + + TL + + S G
Sbjct: 277 VARRQIAAGRARLLDRLGADTWLVLPAAGGPGHLRGSGARDRDAWRQATLGCTVVASAYG 336
Query: 426 CCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
+P + P+ ++ + G D+ LLD
Sbjct: 337 LPSCVLPTPRTQGGPVGLALVGPPGADRGLLD 368
>gi|444354921|ref|YP_007391065.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related
amidases [Enterobacter aerogenes EA1509E]
gi|443905751|emb|CCG33525.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related
amidases [Enterobacter aerogenes EA1509E]
Length = 381
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 177/392 (45%), Gaps = 37/392 (9%)
Query: 76 LKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGI 135
L FA+KD D+ G+ T GSP + D A R A VV LL NG GKT L E AFG+
Sbjct: 27 LTFAVKDSLDIAGFPTRAGSPVLQ-DAPPAVRHAAVVEALLDNGCQLRGKTTLHELAFGV 85
Query: 136 TGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGY 195
TG N H GTP N P IPGGSSSGSA VAA VDFA+GTDT G VR+PA+ CG++G
Sbjct: 86 TGINPHSGTPRNTHYPQLIPGGSSSGSAAVVAAGEVDFAVGTDTGGSVRMPAACCGVVGL 145
Query: 196 RPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIF 255
+PS G +S GV+P SLD VGL AR+ + L R A +
Sbjct: 146 KPSFGRLSRAGVMPTESSLDCVGLFARDIATL-------------------RQALAKALG 186
Query: 256 QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTATL 315
+ + AI L+G PE + Q I S + ++ P A
Sbjct: 187 E-----SAPPARRAAPAISYLAGTATPE---IEQLIVSRLQQAGLAWTRAELPGFNEAHQ 238
Query: 316 KALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNEMR 375
L +V+ F +I P L +V R+ + VR +
Sbjct: 239 AGL-TVISQENWLAFHSIIN------APNLAPDVARRIRAGAEIGPQQRQAAESVRQQFS 291
Query: 376 AALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGK 435
A + L ++++PT+ + P L + LV ++SG +++P+G+
Sbjct: 292 ATVDAQLAKTPLILLPTLPECPPTLEEAADPLKVVNLTRLVRPF--NLSGHPALSLPLGE 349
Query: 436 YNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
N P+++ + + LL+ L + L+
Sbjct: 350 INHRPVALQLVANKNKEFDLLNYAEYLLEKLK 381
>gi|126731637|ref|ZP_01747442.1| pyrazinamidase/nicotinamidase [Sagittula stellata E-37]
gi|126707803|gb|EBA06864.1| pyrazinamidase/nicotinamidase [Sagittula stellata E-37]
Length = 384
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 182/385 (47%), Gaps = 46/385 (11%)
Query: 75 GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFG 134
GL A+KD D+ G+VT GS D A+ A VV LL +GA +GK + E A+G
Sbjct: 22 GLAVAVKDCIDIAGHVTASGSAALA-DGAPAKAHAKVVEDLLASGAHVVGKAKMHELAYG 80
Query: 135 ITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILG 194
+TG N +GTPVNP+ P IPGGSSSGSAVAVA L D A+GTDT G VR PA CG+ G
Sbjct: 81 MTGVNAAFGTPVNPRWPDRIPGGSSSGSAVAVAGDLCDAAVGTDTGGSVRQPAICCGLYG 140
Query: 195 YRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDI 254
+P+ G +S G P +LD VG+LAR+A +L R + A +P F +
Sbjct: 141 IKPTFGRISRDGCHPAESTLDCVGVLARSAKVLTRA------MQAADP------TFTPE- 187
Query: 255 FQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTAT 314
L+ P++ + V + +G+ + + ++GL PE G
Sbjct: 188 -PLTAAPRMARVRV------------DDLDPRIGEPLVYGL--MEGL------PEAGYVQ 226
Query: 315 L----KALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKV 370
L +A + M + ++ + PRLG +V R+ A T D ++ V
Sbjct: 227 LPGMEEAFDAAMTVIGAETYRACHALL---DDPRLGDDVRARLSAAGAITPDRLEQAEDV 283
Query: 371 RNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVA 430
R A + L +L+ P + P L+ + T A+ T L +++G +
Sbjct: 284 RTRFTAEVDAALASVDVLITPAMPTVPPTLD-EATDPAKVLPLTRFLRPF-NLTGHPAIV 341
Query: 431 IPIGKYNEHPISISFITYHGGDKFL 455
+P+ E P+ + + G D L
Sbjct: 342 LPV--LGELPLGLQIVGRKGADAQL 364
>gi|406596410|ref|YP_006747540.1| amidase [Alteromonas macleodii ATCC 27126]
gi|406373731|gb|AFS36986.1| amidase [Alteromonas macleodii ATCC 27126]
Length = 421
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 190/385 (49%), Gaps = 27/385 (7%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
++ PL+GL A+KD+F ++G T G+PDW H + T V +L+ GAT GKT+
Sbjct: 50 SKLPLSGLGLAVKDLFHIEGLPTAAGNPDWLATHAIPKNTNRCVAKMLQAGATFKGKTIT 109
Query: 129 DEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPAS 188
DE A+ + G+NKHY T VNP P+HIPGGSSSGSAVAV+A L D LGTDT G +RVP+S
Sbjct: 110 DELAYSLHGQNKHYETLVNPVAPAHIPGGSSSGSAVAVSAHLADIGLGTDTGGSIRVPSS 169
Query: 189 FCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ-LNAVEPRRARR 247
+ G+ G R +HG V+ ++ + S DTVG + R+ + L +V +V + E + R
Sbjct: 170 YQGLWGLRTTHGVVACDNMVALAPSFDTVGWMTRDLNTLTKVANVCIDSATQSEISGSPR 229
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
A +F+ + L + + A N ++ LK L+ +T
Sbjct: 230 FGIAAHLFEQAAHKSLCKTWLAALADN-----------NDCIVLSETQLDLKTLQTAAT- 277
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
+LQ E + EW++ +P + ++ R+ T ++
Sbjct: 278 --------------FRTLQGNEIWQQHGEWIEYTQPDIAKDIMLRLNWCKTITTQEVEQA 323
Query: 368 YKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCC 427
++ + L L ++ +L+IPT + + +T A + L L++I ++G
Sbjct: 324 KAQQSVVINHLNTLFEEIDVLIIPTTPGVAPRCDADETTLANDRNALLALTAIAGLAGLP 383
Query: 428 QVAIPIGKYNEHPISISFITYHGGD 452
Q+ +P+ + P +S + G D
Sbjct: 384 QLHLPLFTLHNAPCGLSLVGKKGND 408
>gi|334145700|ref|YP_004538910.1| amidase [Novosphingobium sp. PP1Y]
gi|333937584|emb|CCA90943.1| amidase [Novosphingobium sp. PP1Y]
Length = 402
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 125/390 (32%), Positives = 179/390 (45%), Gaps = 25/390 (6%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAG + IKD+F V G+ G G+P W A V L GA IG DE A
Sbjct: 31 LAGSQTVIKDLFRVAGHRIGAGNPVWLEQAPVQTANAWAVQQWLDAGADVIGIAHTDELA 90
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
++G N HYGTP+N + P IPGGSSSGSA AVAA LV +A+ TDT G RVPAS+CGI
Sbjct: 91 LSLSGTNVHYGTPLNTKAPDRIPGGSSSGSAAAVAAGLVPYAMATDTGGSTRVPASYCGI 150
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G R +HG V + G++P + DTVG+LA + + L R LL A +P AR L+ A
Sbjct: 151 FGIRTTHGRVPVDGLVPLAPRFDTVGVLASSGAWLARATGPLLPDYAAKP-AARCLVVAT 209
Query: 253 DIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGT 312
D+ L+ + KA+ H+++ TS +G
Sbjct: 210 DVLALADRDAADAVDDAVKAVAK--------HLDI--------------ETVRTSFADG- 246
Query: 313 ATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRN 372
L+ L+ Q E + EW++ KP+ G + R A +
Sbjct: 247 -RLQEWKDAFLARQPVEVWKTHGEWIEGNKPKFGPGIGLRFEMASKADPARANLADMAAE 305
Query: 373 EMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIP 432
++ AAL++ + +L T S KL DRT+ ++ I ++G V++P
Sbjct: 306 QILAALEKHVPPGGVLAFATASGAAPKLELPAAEKQSLRDRTIAMTCIAGLAGVPAVSVP 365
Query: 433 IGKYNEHPISISFITYHGGDKFLLDTVLDL 462
P+ + + G D+ LL T L
Sbjct: 366 AASVAGLPLGLCLLARRGEDEMLLATAAAL 395
>gi|407683360|ref|YP_006798534.1| amidase [Alteromonas macleodii str. 'English Channel 673']
gi|407244971|gb|AFT74157.1| amidase [Alteromonas macleodii str. 'English Channel 673']
Length = 421
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 189/385 (49%), Gaps = 27/385 (7%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
++ PL+GL A+KD+F ++G T G+PDW H + T V +L+ GA GKT+
Sbjct: 50 SKLPLSGLGLAVKDLFHIEGLPTAAGNPDWLATHSIPKNTNRCVAKMLQAGAAFKGKTIT 109
Query: 129 DEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPAS 188
DE A+ + G+NKHY T VNP P+HIPGGSSSGSAVAV+A L D LGTDT G +RVP+S
Sbjct: 110 DELAYSLHGQNKHYETLVNPVAPAHIPGGSSSGSAVAVSAHLADIGLGTDTGGSIRVPSS 169
Query: 189 FCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ-LNAVEPRRARR 247
+ G+ G R +HG V+ ++ + S DTVG + R+ + L +V +V + E + R
Sbjct: 170 YQGLWGLRTTHGVVACDNMVALAPSFDTVGWMTRDLNTLTKVANVCIDSATQSEISGSPR 229
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
A +F+ + L + + A N ++ LK L+ +T
Sbjct: 230 FGIAAHLFEQAAHKSLCKTWLAALADN-----------NDCIVLSETQLDLKTLQTAAT- 277
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
+LQ E + EW++ +P + ++ R+ T ++
Sbjct: 278 --------------FRTLQGNEIWQQHGEWIEYTQPDIAKDIMLRLNWCKTITTQEVEQA 323
Query: 368 YKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCC 427
++ + L L ++ +L+IPT + + +T A + L L++I ++G
Sbjct: 324 KAQQSVVINHLNTLFEEIDVLIIPTTPGVAPRCDADETTLANDRNALLALTAIAGLAGLP 383
Query: 428 QVAIPIGKYNEHPISISFITYHGGD 452
Q+ +P+ + P +S + G D
Sbjct: 384 QLHLPLFTLHNAPCGLSLVGKKGND 408
>gi|397164901|ref|ZP_10488356.1| amidase family protein [Enterobacter radicincitans DSM 16656]
gi|396094049|gb|EJI91604.1| amidase family protein [Enterobacter radicincitans DSM 16656]
Length = 389
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 130/393 (33%), Positives = 181/393 (46%), Gaps = 31/393 (7%)
Query: 66 PPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGK 125
P A PL+GL FA KD+FDV GY TG G+P TA V +LL GA +GK
Sbjct: 16 PQAESGPLSGLTFAAKDLFDVAGYPTGGGNPHVLAASGIKTTTAPAVQMLLDGGARFVGK 75
Query: 126 TVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
T E A+ ++G N HYGTP N P IPGGSSSGSA AV+ L D ALGTDT G VR
Sbjct: 76 THTSELAYSMSGHNIHYGTPRNGAAPLRIPGGSSSGSASAVSNGLCDIALGTDTGGSVRT 135
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRA 245
PAS+CG+ G RP+HG +S+ G P ++DT G AR LL
Sbjct: 136 PASYCGLFGLRPTHGRISLAGCQPLCATMDTCGFFARTPQAFSAAASCLL---------- 185
Query: 246 RRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQS 305
DD F +++ + +L + + V + +A + + L A
Sbjct: 186 -----GDDTFTPAQI----ELACHEALFAALPPHSQQALLPVREKLAQHFGEIALLDA-- 234
Query: 306 TSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIK 365
PE +A+ + +Q YE ++ +LG +V ER T+
Sbjct: 235 PLPER-----EAVYTAFRQIQGYEAWQSQGHNIERLGMQLGPDVAERFAYGKAVTEAEFA 289
Query: 366 ILYKVRNEMRAALQRLLKDDKILVIPTVSD--PPLKLNTKKTYSAEFHDRTLVLSSIGSM 423
++R A Q L D+IL++PTV D P L ++ + L+L I +
Sbjct: 290 AACQLREAFTAWWQTQL-GDRILLLPTVPDAAPLLTAAPEEIEATRRISHDLLL--IAVL 346
Query: 424 SGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+ QV IP+ + P+ IS I G D L+
Sbjct: 347 TRRPQVNIPVTTIDGAPLGISLIGPCGSDALLV 379
>gi|323357775|ref|YP_004224171.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Microbacterium
testaceum StLB037]
gi|323274146|dbj|BAJ74291.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Microbacterium
testaceum StLB037]
Length = 560
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 176/392 (44%), Gaps = 35/392 (8%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAGL A+KD+F + G+ G G+P + + + TA V LL+ GA+ G DEFA
Sbjct: 181 LAGLTVAVKDLFAIAGFRIGAGNPAFLEEARPEKVTAPAVADLLRAGASLRGIARTDEFA 240
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+ I G+N HYGTP N + +PGGSSSG A AVAA D L TDT G +RVPAS+ G+
Sbjct: 241 YSIAGDNVHYGTPPNGAVVGALPGGSSSGPASAVAAGHADIGLATDTAGSIRVPASYQGL 300
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G R +H V G+LP +QS DT+G L R+ L RV L + D
Sbjct: 301 WGLRTTHDLVPRQGMLPLAQSFDTIGWLTRDGDTLQRVADWCLSYDGSATTENVYGASGD 360
Query: 253 DIFQLSKVP-------KLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQS 305
D+ VP + T SK + +L+ +P P + +
Sbjct: 361 DLPWRFLVPEEILECAEPATREAFSKLVAALAASDDP-------------PPFRAVH--- 404
Query: 306 TSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIK 365
T L A + ++Q E EW+ + +G V ER A +
Sbjct: 405 ------TGDLDAAFAAFRTVQGAEAWRNNGEWMTAHPGAVGPAVAERFSVASRIAAADEA 458
Query: 366 ILYKVRNEMRAALQRLLKDDKILVIPTVSDP-PLKLNTKKTYSAEFHDRTLVLSSIGSMS 424
+ + A L L+ D +L+ PTV P P + A TL +++ +++
Sbjct: 459 AAREDLEPIAAHLAELV-DGAVLIFPTVPGPAPQRTADVDAVRAA----TLRMTAPAAIA 513
Query: 425 GCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
G +++P+ + P+ + ++ G D L+
Sbjct: 514 GLPSISVPLLTVDGAPVGLCLVSRAGTDIALV 545
>gi|421748755|ref|ZP_16186306.1| amidase [Cupriavidus necator HPC(L)]
gi|409772486|gb|EKN54495.1| amidase [Cupriavidus necator HPC(L)]
Length = 370
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 131/390 (33%), Positives = 180/390 (46%), Gaps = 41/390 (10%)
Query: 75 GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFG 134
GL+FA KD+FDV GY TG G+P TA V LL GA +GKT DE AF
Sbjct: 3 GLRFAAKDLFDVAGYPTGGGNPHVLAMSGVKSSTAPAVQCLLDAGAKFVGKTHTDELAFS 62
Query: 135 ITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILG 194
+ G N HYG PVN P I GGSSSGSA AV+ L D ALGTDT G VR PAS CG+ G
Sbjct: 63 MNGNNAHYGAPVNGAAPDRITGGSSSGSASAVSHGLCDLALGTDTGGSVRAPASHCGLFG 122
Query: 195 YRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNA-VEPRRARRLIFADD 253
RP+HG +S+ G LP SLDT G AR+ RV VLL +A P R L+ D
Sbjct: 123 IRPTHGRISLAGCLPLCDSLDTCGFFARDIGTFARVADVLLGPDANALPASVRLLLADDL 182
Query: 254 IFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTA 313
+ + V ++ ++L NG A
Sbjct: 183 FALAEPAARDALLPVAARIQDALG--------------------------------NGDA 210
Query: 314 TLKALSSVMLSLQRYEFKTIYEEW------VKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
A + + + +E W ++ RLG +V R + T
Sbjct: 211 VAAADRPIGDLYWAFRYVQGWEAWRSDGDMIERYGLRLGPDVAARFAFSKEVTAGQRDEA 270
Query: 368 YKVRNEMRAALQRLLKDDKILVIPTVSD-PPLKLNTKKTYSAEFHDRTLVLSSIGSMSGC 426
+VR A L LL DD +L++PT+ D PL+ T ++ +R + + + +SG
Sbjct: 271 MQVRRAFTAHLAALLGDDGVLLLPTMPDIAPLRDAALDTLE-DYRNRAVQMLCLAGLSGF 329
Query: 427 CQVAIPIGKYNEHPISISFITYHGGDKFLL 456
Q+ +P+ + N P+ +S + G D+ L+
Sbjct: 330 PQITLPLCRRNGAPLGLSLLGPAGSDRTLV 359
>gi|309800743|ref|ZP_07694878.1| Amidase [Bifidobacterium dentium JCVIHMP022]
gi|308222588|gb|EFO78865.1| Amidase [Bifidobacterium dentium JCVIHMP022]
Length = 543
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 123/390 (31%), Positives = 192/390 (49%), Gaps = 16/390 (4%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL GL A+KD++ V+GY G GS + + + + V LL GA +G + DEF
Sbjct: 154 PLQGLSVAVKDLYGVEGYAIGAGSEAFLAEGIPQQHNSWPVQRLLDAGADVLGISRTDEF 213
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+ + G N HYGTP NPQ P I GGSSSGSA A A VD LG+DT G VRVP+S+
Sbjct: 214 AYSLAGTNAHYGTPPNPQAPGRISGGSSSGSASATALGQVDIGLGSDTGGSVRVPSSYQH 273
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLL-QLNAVEPRRARRLIF 250
+ G R + G+V M GVLP SQS DTVG + R +L +V VL+ Q + VE + ++I+
Sbjct: 274 LWGIRTTCGSVPMEGVLPLSQSFDTVGWMTRTPDLLEKVAKVLITQESGVESALSGKVIW 333
Query: 251 ADDIFQLSKVPKLKTIHV-ISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
++++ + + +H IS+ ES +N +++ Q + + G R + P+
Sbjct: 334 SEELMSSTNIDVSAGLHAWISRLEESA---RNATDVSLEQI---RLDGILGPRFEGEGPD 387
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
+ L + V Q YE + W+ LG ++ R A T +N + +
Sbjct: 388 RLSDWLSSYKIV----QGYEAWRNHGTWLARHWNTLGADIESRFRTASELTAENYRNARE 443
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDR---TLVLSSIGSMSGC 426
+ + ++ +L +L++P+ S K+ D T+ L+ I ++G
Sbjct: 444 HMDFWKTNVRSILG-QSVLLVPSASSVAPKITDSAIGGTSIEDERTATMRLTCIAGLTGL 502
Query: 427 CQVAIPIGKYNEHPISISFITYHGGDKFLL 456
V IPI + P I + G D L+
Sbjct: 503 PAVNIPIRTEDGLPCGICAVGPAGSDTELI 532
>gi|283457056|ref|YP_003361620.1| aspartyl/glutamyl-tRNA(asn/Gln) amidotransferase subunit A
[Bifidobacterium dentium Bd1]
gi|283103690|gb|ADB10796.1| GatA Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
[Bifidobacterium dentium Bd1]
Length = 543
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 123/390 (31%), Positives = 192/390 (49%), Gaps = 16/390 (4%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL GL A+KD++ V+GY G GS + + + + V LL GA +G + DEF
Sbjct: 154 PLRGLSVAVKDLYGVEGYAIGAGSEAFLAEGIPQQHNSWPVQRLLDAGADVLGISRTDEF 213
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+ + G N HYGTP NPQ P I GGSSSGSA A A VD LG+DT G VRVP+S+
Sbjct: 214 AYSLAGTNAHYGTPPNPQAPGRISGGSSSGSASATALGQVDIGLGSDTGGSVRVPSSYQH 273
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLL-QLNAVEPRRARRLIF 250
+ G R + G+V M GVLP SQS DTVG + R +L +V VL+ Q + VE + ++I+
Sbjct: 274 LWGIRTTCGSVPMEGVLPLSQSFDTVGWMTRTPDLLEKVAKVLITQESGVESALSGKVIW 333
Query: 251 ADDIFQLSKVPKLKTIHV-ISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
++++ + + +H IS+ ES +N +++ Q + + G R + P+
Sbjct: 334 SEELMSSTNIDVSAGLHAWISRLEESA---RNATDVSLEQI---RLDGILGPRFEGEGPD 387
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
+ L + V Q YE + W+ LG ++ R A T +N + +
Sbjct: 388 RLSDWLSSYKIV----QGYEAWRNHGTWLARHWNTLGADIESRFRTASELTAENYRNARE 443
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDR---TLVLSSIGSMSGC 426
+ + ++ +L +L++P+ S K+ D T+ L+ I ++G
Sbjct: 444 HMDFWKTNVRSILG-QSVLLVPSTSSVAPKITDSAIGGTSIEDERTATMRLTCIAGLTGL 502
Query: 427 CQVAIPIGKYNEHPISISFITYHGGDKFLL 456
V IPI + P I + G D L+
Sbjct: 503 PAVNIPIRTEDGLPCGICAVGPAGSDTELI 532
>gi|326330930|ref|ZP_08197230.1| amidase [Nocardioidaceae bacterium Broad-1]
gi|325951288|gb|EGD43328.1| amidase [Nocardioidaceae bacterium Broad-1]
Length = 483
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 178/384 (46%), Gaps = 36/384 (9%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L+G A+KD+F V G+ G GSP W + A V LL GA+ G +EFA
Sbjct: 129 LSGETVAVKDLFAVAGFAVGAGSPAWLEQAPVSSTHAAAVAALLDAGASVRGIARTEEFA 188
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+ ++G N HYG P NP+ P IPGGSSSGSA AVA LG+DT G +RVPA++ G+
Sbjct: 189 YSLSGLNAHYGAPPNPKAPDRIPGGSSSGSATAVALGHASIGLGSDTGGSIRVPAAYQGL 248
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G R SHG VS G+LP +++ DTVG + R+A +L VG VLL AV A
Sbjct: 249 YGIRTSHGAVSREGLLPLAKAFDTVGWMTRSAFLLQAVGDVLLP-EAVPSSPA------- 300
Query: 253 DIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGT 312
+ ++ VP L + +V ++ +P + L + +P
Sbjct: 301 SVDEIHLVPSLVAL----------------AEEDVATAVSEALPEAQPL---AWAP---- 337
Query: 313 ATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRN 372
A L Q Y+ + W+++ LG V R A T+ V +
Sbjct: 338 ARLDEWRQAFAIGQAYQAWQAHGAWLETRLDTLGEAVRGRFEMARTVTRKQADEARAVLS 397
Query: 373 EMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIP 432
+ RA + ++ D++L P+ S + +A D TL L+ I ++G V+IP
Sbjct: 398 QARAEILDVVG-DRVLAYPSAS----SVAPTAAEAAGVRDDTLRLTCIAGIAGLPAVSIP 452
Query: 433 IGKYNEHPISISFITYHGGDKFLL 456
+ P + + G D+ LL
Sbjct: 453 VRTPTNLPAGLCLVAAPGRDRDLL 476
>gi|298717184|ref|YP_003729826.1| amidase [Pantoea vagans C9-1]
gi|298361373|gb|ADI78154.1| amidase [Pantoea vagans C9-1]
Length = 443
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 138/449 (30%), Positives = 209/449 (46%), Gaps = 52/449 (11%)
Query: 35 LRRRRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLA---GLKFAIKDVFDVKGYVT 91
L+ +NP+ G + F +R+ A+Q L+ GL +IKD+FDV+G VT
Sbjct: 26 LQAAQNPEQQGSL---VFTQRYAASGSAANARWQAKQALSAIDGLPVSIKDLFDVQGEVT 82
Query: 92 GFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNP--Q 149
GS D A A VV LL GA +GKT + EFAF G N HYGTPVNP +
Sbjct: 83 TAGS-RLLADAPVAVANASVVDKLLLAGAAIVGKTTMTEFAFSGLGINPHYGTPVNPWQR 141
Query: 150 MPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLP 209
IPGGSSSG+AVAVA + A+GTDT G VR+PA+ CG+ G++P+ ++ G LP
Sbjct: 142 EQQRIPGGSSSGAAVAVAEGMCLGAVGTDTGGSVRIPAALCGLAGFKPTAERINQRGTLP 201
Query: 210 NSQSLDTVGLLARNASILHRVGHVL----LQLNAVEPRRARRLIFADDIFQLSKVPKLKT 265
S SLD++G++A + + ++ L L ++ R AR FA VP+ +
Sbjct: 202 LSTSLDSIGVIADDVRSCWLLDSIIADRPLDLQLLDLRNAR---FA--------VPQTRV 250
Query: 266 IHVISKAIESLSGYQNPEHMNVGQYIAS-NVPSLKGLRAQSTSPENGTATLKALSSVMLS 324
+ + + + + G + +P L L A N + A
Sbjct: 251 LDGLDQHVAQAWQHAITLLKQAGATVIDVTLPELDELNAM-----NARGGITA------- 298
Query: 325 LQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTT-QDNIKILYKVRNEMRAALQRLLK 383
YE +++ V++ V R+ + T QD I+ LY+ R + + L
Sbjct: 299 ---YEAWQWHKKTVQAQPEAYDPQVLARIQRGSHLTGQDAIE-LYQQRAAWQQRINAALS 354
Query: 384 DDKILVIPTVSDPPL------KLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYN 437
D L++PTV PL LN + Y E + L SI +M C +++P +
Sbjct: 355 DFDALLMPTV---PLVAPTIASLNDAQRY-MEINASMLRNPSIINMLDGCALSLPCHRPG 410
Query: 438 EHPISISFITYHGGDKFLLDTVLDLYDSL 466
P+ +S + HG D L+ L + +L
Sbjct: 411 SAPVGLSLASIHGDDASLISWSLAVETAL 439
>gi|410861256|ref|YP_006976490.1| amidase [Alteromonas macleodii AltDE1]
gi|410818518|gb|AFV85135.1| amidase [Alteromonas macleodii AltDE1]
Length = 423
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 182/380 (47%), Gaps = 25/380 (6%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L GL A+KD+F +KG T G+PDW+ H + T V +L GA+ GKT+ DE A
Sbjct: 56 LKGLGLAVKDLFHIKGLPTAAGNPDWQATHDIPQATNTCVATMLNAGASFKGKTITDELA 115
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+ + G+NKHY VNP P++IPGGSSSGSAVAV+A + D LGTDT G +RVPAS+ G+
Sbjct: 116 YSLHGQNKHYAPLVNPVAPANIPGGSSSGSAVAVSAHIADIGLGTDTGGSIRVPASYQGL 175
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G R +HG + ++ + S DT+G + R+ L +V H + + I +
Sbjct: 176 WGLRTTHGLLPCDNMVALAPSFDTIGWMTRDLDTLQKVAHTCID------NTKQSTIKVN 229
Query: 253 DIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGT 312
F ++ T H S+ + L+ +A N P + Q + T
Sbjct: 230 PRFGIATPLFANTAHS-SECNKWLT------------ELADNNPCVALTEEQLDLSKLQT 276
Query: 313 ATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRN 372
A + LQ E + EW++ +P + ++ R+ T ++ + +
Sbjct: 277 A------ATFRILQGSEIWQQHGEWIEKVQPDIAKDIMLRLAWCKTITTQDVTLAKAQQK 330
Query: 373 EMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIP 432
+ + L D +LVIPT + + +T A + L L++I ++G Q+ +P
Sbjct: 331 VVIDHINALFNDFDVLVIPTTPGVAPRCDADETTLANDRNALLALTAIAGLAGLPQLHLP 390
Query: 433 IGKYNEHPISISFITYHGGD 452
+ + P +S + G D
Sbjct: 391 LFTLHNAPCGLSLVGKKGND 410
>gi|424884582|ref|ZP_18308197.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WSM2012]
gi|393178281|gb|EJC78321.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WSM2012]
Length = 456
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 129/404 (31%), Positives = 194/404 (48%), Gaps = 46/404 (11%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A KD++D++G VT GS D A+R A VV LL + G +G+T + EFA
Sbjct: 72 LDGIPIAWKDLYDIEGLVTTAGSVVLAADA-PAKRDAAVVNLLRQAGMIAVGRTNMSEFA 130
Query: 133 FGITGENKHYGTPVNPQ---MPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
F G N HYGTPVNP+ +P IPGGSSSG+ VAVAA LV A+GTDT G VR+PA+F
Sbjct: 131 FSGLGINPHYGTPVNPRGSDLP-RIPGGSSSGAGVAVAAGLVPVAMGTDTGGSVRIPAAF 189
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
GI+GY+ + G +M GV P ++SLD++G L RN +AV A R
Sbjct: 190 NGIVGYKATRGRHAMDGVYPLAKSLDSLGPLCRNVR------------DAVWIDAAMRGR 237
Query: 250 FADDIFQ--LSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
A DI + L + L +++ + E VG + A +L+ R Q
Sbjct: 238 TAPDIVERPLQGLELLVPENIV---------FDGAEPGVVGAFEA----ALE--RLQQAG 282
Query: 308 PENGTATLKALSSVMLSLQRY-------EFKTIYEEWVKSAKPRLGYNVFERVLEAINTT 360
A + A + + + RY F ++ R+ + V R TT
Sbjct: 283 ARVSRAVIPAFNEIFDLMTRYGPLVTAEAFALHHQRLAGPDADRMDHRVVMRTRLGAKTT 342
Query: 361 QDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSD--PPLK-LNTKKTYSAEFHDRTLVL 417
+ + + R + A ++RL+ D+++ PTV+ PP+ L +++TL
Sbjct: 343 LADYLAILEARGRLIADVERLVG-DRLIAFPTVAHVAPPIAPLEEDDELFFATNNKTLRN 401
Query: 418 SSIGSMSGCCQVAIPIGKYNEH-PISISFITYHGGDKFLLDTVL 460
+++G+ C V+IP G P+ + D+ LL L
Sbjct: 402 TALGNFLDWCGVSIPCGTGEAGVPVGLLLSATANRDEALLGIAL 445
>gi|222834269|gb|EEE72746.1| amidase family protein [Populus trichocarpa]
Length = 175
Score = 150 bits (378), Expect = 2e-33, Method: Composition-based stats.
Identities = 89/172 (51%), Positives = 105/172 (61%)
Query: 64 PPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCI 123
P P AA PL GL FA+KD+FDV GY TG G+P TA V LL GA +
Sbjct: 4 PVPNAANGPLRGLTFAVKDLFDVSGYPTGGGNPHVLARSGIKTTTAPTVQKLLDAGAAFV 63
Query: 124 GKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCV 183
GK DE AF + G+N HYG P N P I GGSSSGSA AV+ +L DFALGTDT G V
Sbjct: 64 GKVHTDELAFSMNGQNHHYGGPYNGAAPDRITGGSSSGSASAVSNKLCDFALGTDTGGSV 123
Query: 184 RVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLL 235
R PAS CG+ G RPSHG +S+ +P ++LDT G AR+ + RV VLL
Sbjct: 124 RAPASHCGLFGIRPSHGRISLTHCMPLCETLDTCGFFARDIATFARVADVLL 175
>gi|116255628|ref|YP_771461.1| hypothetical protein pRL110427 [Rhizobium leguminosarum bv. viciae
3841]
gi|115260276|emb|CAK03380.1| half-amidase [Rhizobium leguminosarum bv. viciae 3841]
Length = 456
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/377 (32%), Positives = 189/377 (50%), Gaps = 45/377 (11%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A KD+FD++G T GS ++ A+R A VV LL + G +G+T + EFA
Sbjct: 72 LDGIPIAWKDLFDIEGLPTTAGSVVLAKNM-PAKRDAAVVALLRQAGMVAVGRTNMSEFA 130
Query: 133 FGITGENKHYGTPVNPQ---MPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
F G N HYGTPVNP+ +P IPGGSSSG+ VAVAA LV A+GTDT G VR+PA+F
Sbjct: 131 FSGLGINPHYGTPVNPRGTDLP-RIPGGSSSGAGVAVAAGLVPVAMGTDTGGSVRIPAAF 189
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
GI+GY+ + G +M GV P ++SLD++G L R+ + +AV A R +
Sbjct: 190 NGIVGYKATRGRHAMAGVYPLAKSLDSLGPLCRSVT------------DAVWIDAAMRGL 237
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGL--RAQSTS 307
A D+ L+ + +I PE++ A V + + R Q
Sbjct: 238 TAPDVV----AHPLQGLELIV-----------PENIVFDGAEAGVVAAFEAALERLQKAG 282
Query: 308 PENGTATLKALSSVMLSLQRY------EFKTIYEEWVKSAKP-RLGYNVFERVLEAINTT 360
+ + A + + RY E +++E + A R+ + V R TT
Sbjct: 283 AKVARTVIPAFDEIFELMTRYGPLVTAEAFALHQERLAGADADRMDHRVVMRTRLGSKTT 342
Query: 361 QDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSD--PPL-KLNTKKTYSAEFHDRTLVL 417
+ + + R+ + A ++RL+ D++L PTV+ PP+ L +++TL
Sbjct: 343 LPDYLAILEARSRLIAVVERLVG-DRLLAFPTVAHVAPPIGPLEQDDELFFATNNKTLRN 401
Query: 418 SSIGSMSGCCQVAIPIG 434
+++G+ C V+IP G
Sbjct: 402 TALGNFLDWCGVSIPCG 418
>gi|408784981|ref|ZP_11196730.1| hypothetical protein C241_00899 [Rhizobium lupini HPC(L)]
gi|408489113|gb|EKJ97418.1| hypothetical protein C241_00899 [Rhizobium lupini HPC(L)]
Length = 452
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 127/400 (31%), Positives = 189/400 (47%), Gaps = 29/400 (7%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
+R L G+ A KD+FD++G VT GS D A R A VVT L + G CIG+T +
Sbjct: 66 SRGLLDGIPVAWKDLFDLEGTVTTAGSTVLA-DDEPASRDADVVTALKQAGMICIGRTNM 124
Query: 129 DEFAFGITGENKHYGTPVNP-QMPSH-IPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
EFAF G N HYGTP NP H +PGGSSSG+ VAVAA LV A+GTDT G VR+P
Sbjct: 125 SEFAFSGLGINPHYGTPRNPLSTDGHRLPGGSSSGAGVAVAAGLVPVAMGTDTGGSVRIP 184
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRAR 246
A+F G++GY+ S G SM GV P ++SLD++G L R +AV A
Sbjct: 185 AAFNGVVGYKASRGRYSMRGVYPLAKSLDSLGPLTRTVQ------------DAVWVDAAM 232
Query: 247 RLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQST 306
R + + +VP L ++ ++ G ++ Q + V + +R Q+
Sbjct: 233 R---GRTVADVQRVP-LSSLSLVVPETVFFDGIEDEVAAAFEQAVDRLVRAGASVRRQAF 288
Query: 307 SPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKI 366
+ L +++ + + E +A R+ V R N + +
Sbjct: 289 PIFSELFELIKEKGALVTAEAFALHKTRLEGADAA--RMDPRVVARTKLGANISVPDYIA 346
Query: 367 LYKVRNEMRAALQRLLKDDKILVIPTV-----SDPPLKLNTKKTYSAEFHDRTLVLSSIG 421
+ R M AA R++ ++L+ PT+ S PL L + + A + RTL + IG
Sbjct: 347 IIDARERMTAAFSRMIGKGELLLSPTLPHVAASVAPL-LESDDAFFA-MNARTLRNTQIG 404
Query: 422 SMSGCCQVAIPIGKYNE-HPISISFITYHGGDKFLLDTVL 460
+ C V+IP G + P+ + G D +L +
Sbjct: 405 NFLDLCGVSIPCGAGDAGMPVGLLLSGLDGTDDRVLGAAM 444
>gi|418532957|ref|ZP_13098850.1| amidase [Comamonas testosteroni ATCC 11996]
gi|371450017|gb|EHN63076.1| amidase [Comamonas testosteroni ATCC 11996]
Length = 417
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 123/414 (29%), Positives = 187/414 (45%), Gaps = 32/414 (7%)
Query: 64 PPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCI 123
PP LAG++ +KD+F V+G G G+P W A+ +A V L L+ GA I
Sbjct: 30 PPFTPTGNALAGMRMGVKDIFLVQGQRMGGGTPAWGAQQPIAQESAPAVQLCLEAGAHWI 89
Query: 124 GKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCV 183
GKTV DE A+ + G N HYG P N P +PGGSSSGSA AV+A VDFALGTD G
Sbjct: 90 GKTVTDELAYSLAGINHHYGMPYNAGAPGRLPGGSSSGSAAAVSAGDVDFALGTDAGGSC 149
Query: 184 RVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAV-EP 242
R+PAS+CGI G R + G + G + S DTVG A++ + R+ H ++ AV E
Sbjct: 150 RLPASYCGIWGIRTTQGRLPG-GGFKLAPSFDTVGWFAKSGEDMARI-HAVIDNEAVHEA 207
Query: 243 RRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLR 302
+ +++ +D + P ++T+ + L+G P A +P
Sbjct: 208 QPDLQILLFEDALHVCD-PDVRTMFMDDLQRLGLNGQWLP---------AGELP------ 251
Query: 303 AQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQD 362
L + L E +I+ +WV + LG +V R A Q+
Sbjct: 252 ------------LAHWAQAHRILAGAETWSIHGDWVTAHGAALGADVRARFGFASQAAQE 299
Query: 363 NIKILYKVRNEMRAALQRLLKDDKILV-IPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIG 421
++ + +R+ L +L D V +PTV P +T + L I
Sbjct: 300 DLAVWQALRDAATRMLDKLFADTGAFVLLPTVPGPAPMRDTAAHELQRMREMAQQLLCIA 359
Query: 422 SMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASN 475
++G QV+ P + P+ +S I D +L +D + + + A+
Sbjct: 360 GLAGLPQVSFPWRNVDGAPVGMSVIGPRDADAQVLAAAIDCHKRMTTDIPAAAK 413
>gi|374364534|ref|ZP_09622636.1| amidase [Cupriavidus basilensis OR16]
gi|373103831|gb|EHP44850.1| amidase [Cupriavidus basilensis OR16]
Length = 345
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 119/356 (33%), Positives = 170/356 (47%), Gaps = 39/356 (10%)
Query: 108 TAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVA 167
TA V LL NGA +GKT DE AF + G+N HYG PVN P I GGSSSGSA AV+
Sbjct: 11 TAPTVQRLLDNGAAFVGKTHTDELAFSMNGKNAHYGAPVNGAAPGRITGGSSSGSASAVS 70
Query: 168 AQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASIL 227
QL DFALGTDT G VR PAS CG+ G RP+ G +S+ L S DT G AR+
Sbjct: 71 NQLCDFALGTDTGGSVRAPASHCGLFGIRPTVGRISLAQTLALCDSFDTCGFFARDIRTF 130
Query: 228 HRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNV 287
RV VLL + + RL+ A+D+F++ P L + + IE+ G P
Sbjct: 131 ARVADVLLGGDPRPLPASPRLLLAEDLFRMPTAPALDALLPVVGGIEAAFGKATP----- 185
Query: 288 GQYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGY 347
++ P L+ + +Q +E ++ +LG
Sbjct: 186 --VTVADRP------------------LEDIWWAFRYVQGWEAWQTDGAMIEQYGLQLGP 225
Query: 348 NVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSD-PPL------KL 400
+V R + T+ + VR + A L LL +D +L++PT+ D PL +L
Sbjct: 226 DVAARFAFSKGVTEAQFEASSAVRRDFTAHLAALLGNDAVLILPTMPDIAPLSDAAGEEL 285
Query: 401 NTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
T + SA+ TL L+ +SG +++P+ P+ IS + G D+ L+
Sbjct: 286 ETYRNLSAQ----TLCLA---PLSGFPHLSLPLASRAGAPLGISLMGPAGSDRSLI 334
>gi|424919835|ref|ZP_18343198.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WSM597]
gi|392848850|gb|EJB01372.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WSM597]
Length = 456
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 124/376 (32%), Positives = 183/376 (48%), Gaps = 43/376 (11%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A KD+FD++G T GS D A+R A VV LL + G IG+T + EFA
Sbjct: 72 LDGIPIAWKDLFDIEGLATTAGSVVLGADA-PAKRDAAVVALLRQAGMIAIGRTNMSEFA 130
Query: 133 FGITGENKHYGTPVNPQ---MPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
F G N HYGTPVNP+ +P IPGGSSSG+ VAVAA LV A+GTDT G VR+PA+F
Sbjct: 131 FSGLGINPHYGTPVNPRGTDLP-RIPGGSSSGAGVAVAAGLVPVAMGTDTGGSVRIPAAF 189
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
GI+GY+ + G +M GV P ++SLD++G L R+ +AV A R
Sbjct: 190 NGIVGYKATRGRHAMDGVYPLAKSLDSLGPLCRSVR------------DAVWIDAAMRGR 237
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGL-RAQSTSP 308
A D+ + + P+ + V + + E + + A GL R Q
Sbjct: 238 IAPDVVE--RPPQGLDLLVPENIV-----FDGAEPGVIAAFEA-------GLERLQRAGV 283
Query: 309 ENGTATLKALSSVMLSLQRY-------EFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQ 361
A + A ++ + RY F +E R+ + V R T+
Sbjct: 284 HVARAVIPAFDAIFDLMTRYGPLVTAEAFALHHERLAGPDADRMDHRVVMRTRLGSRTSL 343
Query: 362 DNIKILYKVRNEMRAALQRLLKDDKILVIPTVSD--PPLK-LNTKKTYSAEFHDRTLVLS 418
+ + + R M A ++RL+ D++L PTV+ PP+ L +++TL +
Sbjct: 344 ADYLAILEARKRMIADVERLVG-DRLLAFPTVAHVAPPIGPLEGDDELFFATNNKTLRNT 402
Query: 419 SIGSMSGCCQVAIPIG 434
++G+ C V+IP G
Sbjct: 403 ALGNFLDWCGVSIPCG 418
>gi|333916681|ref|YP_004490413.1| Amidase [Delftia sp. Cs1-4]
gi|333746881|gb|AEF92058.1| Amidase [Delftia sp. Cs1-4]
Length = 456
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 126/410 (30%), Positives = 196/410 (47%), Gaps = 50/410 (12%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
AR P+ GL ++KD+FD+ G+ T G D A+RTA VV L + GA +G T +
Sbjct: 68 ARSPIEGLPVSVKDLFDIAGFPT-LGGSRLLADAPPAQRTAEVVQRLRQAGAVIVGTTNM 126
Query: 129 DEFAFGITGENKHYGTPVNP----QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVR 184
EFA+ G N HYGTP NP + IPGGSSSG+A++V + A+G+DT G VR
Sbjct: 127 TEFAYSGLGINPHYGTPRNPWQRDEDGGRIPGGSSSGAAISVTDGMAMAAIGSDTGGSVR 186
Query: 185 VPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLA---RNASILHRV--GHVLLQLNA 239
+P++ CG+ G++P+ VSM GVLP S +LD++G LA R + L + G L +L+A
Sbjct: 187 IPSALCGLTGFKPTARRVSMEGVLPLSANLDSIGPLAPSVRCCATLDAILSGEPLGELHA 246
Query: 240 VEPRRARRL-----IFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASN 294
P + RL + D + +T+ ++S+A G +I
Sbjct: 247 A-PLQGLRLLAPTNVVLDGMDATVAAAWERTLTLLSQA---------------GAHITHA 290
Query: 295 VPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVL 354
V + G A S TA + + R+ T E+ PR+G R+L
Sbjct: 291 VVAPFGELADINSKGGFTA------AEAWAWHRHHIATRLSEY----DPRVG----TRIL 336
Query: 355 EAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVS-DPPLKLNTKKTYSAEFHDR 413
+ + + L R + AA+ + D ++V+PTV P + ++ A F
Sbjct: 337 RGKDISAADYIDLLARRRQWIAAVSAQMADHDLIVMPTVPVVAPKIADLTQSDEAYFGAN 396
Query: 414 TLVLSS---IGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVL 460
L+L + I + GC +++P + E P+ +S G D+ LL L
Sbjct: 397 GLILRNPTLINFLDGCA-ISLPCQRAGEAPVGLSLAGLGGQDRRLLSVAL 445
>gi|402486979|ref|ZP_10833806.1| hypothetical protein RCCGE510_04727 [Rhizobium sp. CCGE 510]
gi|401814071|gb|EJT06406.1| hypothetical protein RCCGE510_04727 [Rhizobium sp. CCGE 510]
Length = 460
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 126/377 (33%), Positives = 183/377 (48%), Gaps = 45/377 (11%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A KD+FDV+G T GS D A+R A VV LL + G IG+T + EFA
Sbjct: 72 LDGIPIAWKDLFDVEGLPTTAGSVVLA-DEKPAKRDAAVVDLLRQAGMVAIGRTNMSEFA 130
Query: 133 FGITGENKHYGTPVNPQ---MPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
F G N HYGTPVNP+ +P IPGGSSSG+ VAVAA LV A+GTDT G VR+PA+
Sbjct: 131 FSGLGINPHYGTPVNPRSNDLP-RIPGGSSSGAGVAVAAGLVPVAMGTDTGGSVRIPAAL 189
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
GI+GY+ + G +M GV P ++SLD++G L R+ +AV A R +
Sbjct: 190 NGIIGYKATRGRHAMAGVYPLAKSLDSLGPLCRSVR------------DAVWIDAAMRGL 237
Query: 250 FADDIFQ--LSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
A D+ + L + L +V+ E PE IA+ +L R Q
Sbjct: 238 TAPDVGERPLQGLQLLVPENVVFDGAE-------PE------VIAAFEAALD--RLQKAG 282
Query: 308 PENGTATLKALSSVMLSLQRY-------EFKTIYEEWVKSAKPRLGYNVFERVLEAINTT 360
A + A + + RY F +E R+ + V R TT
Sbjct: 283 VHVARAVIPAFDEIFDLMTRYGPLVTAEAFALHHERLAGPDADRMDHRVVMRTRLGSRTT 342
Query: 361 QDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSD--PPL-KLNTKKTYSAEFHDRTLVL 417
+ + R+ + A ++RL+ D+++ PTV+ PP+ L +++TL
Sbjct: 343 LADYLAILDARSRLIADVERLVG-DRLIAFPTVAHVAPPIGPLEQDDELFFATNNKTLRN 401
Query: 418 SSIGSMSGCCQVAIPIG 434
+++G+ C V+IP G
Sbjct: 402 TALGNFLDWCGVSIPCG 418
>gi|241666612|ref|YP_002984696.1| hypothetical protein Rleg_6695 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240862069|gb|ACS59734.1| Amidase [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 456
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/375 (32%), Positives = 183/375 (48%), Gaps = 41/375 (10%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A KD+FD++G T GS +D A+R A VV LL + G +G+T + EFA
Sbjct: 72 LDGIPIAWKDLFDMEGLPTTAGSVVLAKDM-PAKRDAAVVALLRQAGMVAVGRTNMSEFA 130
Query: 133 FGITGENKHYGTPVNPQ---MPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
F G N HYGTPVNP+ +P IPGGSSSG+ V VAA LV A+GTDT G VR+PA+F
Sbjct: 131 FSGLGINPHYGTPVNPRGTDLP-RIPGGSSSGAGVVVAAGLVPVAMGTDTGGSVRIPAAF 189
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
GI+GY+ + G +M GV P ++SLD++G L R+ +AV A R +
Sbjct: 190 NGIVGYKATRGRHAMAGVYPLAKSLDSLGPLCRSVR------------DAVWIDVAMRGL 237
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
A D+ +L L+ + +I G + +A+ +L+ R Q +
Sbjct: 238 TAPDVVEL----PLQGLELIVPENIVFDGAEP-------GVVAAFEAALE--RLQKAGAK 284
Query: 310 NGTATLKALSSVMLSLQRY-------EFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQD 362
+ A + + RY F E R+ + V R TT
Sbjct: 285 VARTVIPAFDEIFELMTRYGPLVTAEAFALHRERLAGPDADRMDHRVVMRTRLGSKTTLP 344
Query: 363 NIKILYKVRNEMRAALQRLLKDDKILVIPTVSD--PPL-KLNTKKTYSAEFHDRTLVLSS 419
+ + R+ + A ++RL+ D++L PTV+ PP+ L +++TL ++
Sbjct: 345 DYLAILDARSRLIADVERLVG-DRLLAFPTVAHVAPPIGPLEQDDELFFATNNKTLRNTA 403
Query: 420 IGSMSGCCQVAIPIG 434
+G+ C V+IP G
Sbjct: 404 LGNFLDWCGVSIPCG 418
>gi|190895565|ref|YP_001985857.1| hypothetical protein RHECIAT_PA0000250 [Rhizobium etli CIAT 652]
gi|190699510|gb|ACE93594.1| probable glutamyl-tRNA amidotransferase protein, A subunit
[Rhizobium etli CIAT 652]
Length = 456
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/378 (32%), Positives = 175/378 (46%), Gaps = 47/378 (12%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A KD+FD++G T GS D AER A VV LL G IG+T + EFA
Sbjct: 72 LDGIPIAWKDLFDIEGVTTTAGSRVLAGDA-PAERDAAVVALLKNAGMIAIGRTNMSEFA 130
Query: 133 FGITGENKHYGTPVNPQMPSH--IPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
F G N HYGTPVNPQ IPGGSSSG+ VAVAA LV A+GTDT G VRVPA+F
Sbjct: 131 FSGLGINPHYGTPVNPQNSDRPRIPGGSSSGAGVAVAAGLVPVAMGTDTGGSVRVPAAFN 190
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVE----PRRAR 246
GI+GY+ + G +M GV P ++SLD++G L R + + L A E P +
Sbjct: 191 GIVGYKATRGRHAMDGVYPLAKSLDSLGPLCRTVKDAVWIDAAMRGLTAPEVAERPLQGL 250
Query: 247 RLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQST 306
L+ ++I P + + A+E R Q
Sbjct: 251 ELLVPENIVFDGAEPGV--VAAFEAALE---------------------------RLQRA 281
Query: 307 SPENGTATLKALSSVMLSLQRY------EFKTIYEEWVKSAKP-RLGYNVFERVLEAINT 359
T+ A ++ L +Y + +++E + + R+ + V R T
Sbjct: 282 GVRMSRITIPAFDEIIRLLTKYGPLVTAQAYALHQERLSGPEADRMDHRVVMRTRLGART 341
Query: 360 TQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSD--PPLK-LNTKKTYSAEFHDRTLV 416
T + L + R + A + R + D+++ PTV+ PP+ L +++TL
Sbjct: 342 TAPHYMALLEARGRLIADVDRFIG-DRLIAFPTVAHVAPPIAPLEQDDELFFATNNKTLR 400
Query: 417 LSSIGSMSGCCQVAIPIG 434
+ G+ C V+IP G
Sbjct: 401 NTMFGNFLDWCGVSIPCG 418
>gi|418405622|ref|ZP_12978942.1| hypothetical protein AT5A_00330 [Agrobacterium tumefaciens 5A]
gi|358007535|gb|EHJ99857.1| hypothetical protein AT5A_00330 [Agrobacterium tumefaciens 5A]
Length = 452
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 127/405 (31%), Positives = 187/405 (46%), Gaps = 47/405 (11%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A KD+FD++G VT GS D A R A VV+ L + G CIG+T + EFA
Sbjct: 70 LDGIPVAWKDLFDLEGTVTTAGSTVLSNDA-PASRDADVVSALKEAGMVCIGRTNMSEFA 128
Query: 133 FGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
F G N HYGTP NP +PGGSSSG+ VAVAA LV A+GTDT G VR+PA+F
Sbjct: 129 FSGLGINPHYGTPRNPASTDGHRLPGGSSSGAGVAVAAGLVPVAIGTDTGGSVRIPAAFN 188
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRA----- 245
G++GY+ S G SM GV P ++SLD++G L R V + AV+ R
Sbjct: 189 GVVGYKASRGRYSMRGVYPLAKSLDSLGPLTRTVQDAVWVDAAMRGKAAVDAARTPLSGL 248
Query: 246 ----RRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGL 301
+F D I + V + + +S+A S+ P + I
Sbjct: 249 SLVVPETVFFDGIEEGVAVAFEQAVERLSRAGASVRRQAFPVFSQLFDLI---------- 298
Query: 302 RAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQ 361
+ T +A + L+ + + V A+ RLG N+ +
Sbjct: 299 -----KEKGALVTAEAFALHKARLEGADAARMDPRVV--ARARLGANI---------SLP 342
Query: 362 DNIKILYKVRNEMRAALQRLLKDDKILVIPTVSD-----PPLKLNTKKTYSAEFHDRTLV 416
D I I+ + R M AA ++ +++L+ PT+ PL N + ++ + +TL
Sbjct: 343 DYIAII-EARERMTAAFSGMIGKNELLISPTLPHVAAKVAPLVENDETFFA--MNAKTLR 399
Query: 417 LSSIGSMSGCCQVAIPIGKYNE-HPISISFITYHGGDKFLLDTVL 460
+ IG+ C V+IP G P+ + HG D +L +
Sbjct: 400 NTQIGNFFDLCGVSIPCGTGEAGMPVGLLLSGLHGTDDHVLGVAM 444
>gi|72161974|ref|YP_289631.1| hypothetical protein Tfu_1572 [Thermobifida fusca YX]
gi|71915706|gb|AAZ55608.1| conserved hypothetical protein [Thermobifida fusca YX]
Length = 408
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 122/399 (30%), Positives = 185/399 (46%), Gaps = 31/399 (7%)
Query: 67 PAARQ-PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGK 125
PA R+ L+G + A+KD+F V GY G G+P W + A V LL GA +G
Sbjct: 37 PAIREGALSGFRVAVKDLFAVAGYAIGAGNPTWLHEAPVETDHAPAVRALLHAGADIVGI 96
Query: 126 TVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
EFA+G+TG N+HYGTP NP P +PGGSSSGSA AVA L D LG+DT G +R+
Sbjct: 97 VQTAEFAYGLTGINQHYGTPPNPASPGRVPGGSSSGSASAVALGLADIGLGSDTAGSIRI 156
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRA 245
PAS+CG+ RP+HG V G + + SLDTVG + R +L+RV VLL + P
Sbjct: 157 PASYCGLCSLRPTHGMVPTAGSIGLAPSLDTVGWITRTPRLLNRVSDVLLPQRSAPP--I 214
Query: 246 RRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQS 305
RRL+ A D+F L + P ++ + ++ +A E P H
Sbjct: 215 RRLLLAVDLFDLVE-PAVRDM-LVDEAHEWAQQTGLPLH--------------------- 251
Query: 306 TSPENGT--ATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDN 363
P + T A L+ + + +Q E + W++ + V + + +D
Sbjct: 252 --PVDSTCAAHLEEWAEAVGIIQAVEMWQTHGRWLREHAGAVSSLVADAIAAGEAIPEDY 309
Query: 364 IKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSM 423
++ + R L L+ LV + + + T++ SM
Sbjct: 310 LEWAQETACRGRRLLAELVPPGTALV-QPAAPTTPPPPEQAMSDLDLLTTTVMFVCAASM 368
Query: 424 SGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDL 462
+G + +P + + PI +S + G D+ L V +L
Sbjct: 369 AGLPVLTLPGVRTSAGPIGLSLLAAAGSDRALSALVAEL 407
>gi|381398558|ref|ZP_09923961.1| Amidase [Microbacterium laevaniformans OR221]
gi|380774049|gb|EIC07350.1| Amidase [Microbacterium laevaniformans OR221]
Length = 521
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 123/406 (30%), Positives = 185/406 (45%), Gaps = 27/406 (6%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL+GL A+KD+F +KGY G G+P + +A V LL+ GA+ G DEF
Sbjct: 138 PLSGLTVAVKDLFAIKGYRIGAGNPTYLDSARAETTSAPAVGDLLRGGASLRGIARTDEF 197
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+ I G+N HYGTP N +P +PGGSSSG A AVA D AL TDT G VRVPAS+ G
Sbjct: 198 AYSIAGDNAHYGTPPNAAVPGALPGGSSSGPASAVALGHADIALATDTAGSVRVPASYQG 257
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
+ G R +H V G+LP +QS DTVG L R+ + L V L + + + A
Sbjct: 258 LWGLRTTHDLVPRQGLLPLAQSFDTVGWLTRDGATLQAVADWCLSYDGSDSTDSVFGASA 317
Query: 252 DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENG 311
D+ +VP +E+L+ + IA++ L + S
Sbjct: 318 ADLPWRFRVP-----------VEALAAAEPATRAAFEAMIAASA-----LPVEHVS---- 357
Query: 312 TATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVR 371
L ++Q E +W+++ G V R A T +
Sbjct: 358 LGDLDEYLGPFRTVQGAEAWRNNGDWLRAHPGSTGPAVAARFRAAAAVTAADESAARAAL 417
Query: 372 NEMRAALQRLLKDDKILVIPTVSDP-PLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVA 430
+R L L++ D +L++PTV P P + T A D TL L++ + G ++
Sbjct: 418 QPLRDTLHALVR-DAVLLLPTVPGPAPSRSATGAQVEAVRTD-TLRLTTPAPVGGLPALS 475
Query: 431 IPI----GKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNI 472
+P+ G P+ +S ++ G D L+ L+ + E ++
Sbjct: 476 VPLLTVDGAGGSAPVGVSLVSRAGTDIALVRLGRALHARITETESV 521
>gi|312960888|ref|ZP_07775393.1| pyrazinamidase/nicotinamidase [Pseudomonas fluorescens WH6]
gi|311284546|gb|EFQ63122.1| pyrazinamidase/nicotinamidase [Pseudomonas fluorescens WH6]
Length = 366
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/149 (56%), Positives = 98/149 (65%), Gaps = 1/149 (0%)
Query: 75 GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFG 134
G AIKD DV G+ T GS ++ A+ A VV LL +G IGKTVL E AFG
Sbjct: 14 GRTVAIKDSLDVAGWPTRCGSRAFEH-APPAQDHATVVEALLDDGWQIIGKTVLHELAFG 72
Query: 135 ITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILG 194
+TG N+ GTPVNPQ P IPGGSSSGSAV VA VD ALGTDT G VR+PA+ CG+LG
Sbjct: 73 VTGINEWAGTPVNPQAPDRIPGGSSSGSAVIVAQGNVDVALGTDTGGSVRMPAACCGVLG 132
Query: 195 YRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
+PS G +S GV P S SLD VG +AR+
Sbjct: 133 LKPSFGRLSRHGVYPASSSLDVVGPMARD 161
>gi|332716026|ref|YP_004443492.1| amidase family protein [Agrobacterium sp. H13-3]
gi|325062711|gb|ADY66401.1| amidase family protein [Agrobacterium sp. H13-3]
Length = 452
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 126/405 (31%), Positives = 187/405 (46%), Gaps = 47/405 (11%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A KD+FD++G VT GS D A R A VV+ L + G C+G+T + EFA
Sbjct: 70 LDGIPVAWKDLFDLEGTVTTAGSTVLSNDA-PASRDADVVSALKEAGMVCVGRTNMSEFA 128
Query: 133 FGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
F G N HYGTP NP +PGGSSSG+ VAVAA LV A+GTDT G VR+PA+F
Sbjct: 129 FSGLGINPHYGTPRNPASTDGHRLPGGSSSGAGVAVAAGLVPVAIGTDTGGSVRIPAAFN 188
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRA----- 245
G++GY+ S G SM GV P ++SLD++G L R V + AV+ R
Sbjct: 189 GVVGYKASRGRYSMRGVYPLAKSLDSLGPLTRTVQDAVWVDAAMRGKAAVDAARTPLSGL 248
Query: 246 ----RRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGL 301
+F D I + V + + +S+A S+ P + I
Sbjct: 249 SLVVPETVFFDGIEEGVAVAFEQAVERLSRAGASVRRQAFPVFSQLFDLI---------- 298
Query: 302 RAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQ 361
+ T +A + L+ + + V A+ RLG N+ +
Sbjct: 299 -----KEKGALVTAEAFALHKARLEGADAARMDPRVV--ARARLGANI---------SLP 342
Query: 362 DNIKILYKVRNEMRAALQRLLKDDKILVIPTVSD-----PPLKLNTKKTYSAEFHDRTLV 416
D I I+ + R M AA ++ +++L+ PT+ PL N + ++ + +TL
Sbjct: 343 DYIAII-EARERMTAAFSGMIGKNELLISPTLPHVAAKVAPLVENDETFFA--MNAKTLR 399
Query: 417 LSSIGSMSGCCQVAIPIGKYNE-HPISISFITYHGGDKFLLDTVL 460
+ IG+ C V+IP G P+ + HG D +L +
Sbjct: 400 NTQIGNFFDLCGVSIPCGTGEAGMPVGLLLSGLHGTDDHVLGVAM 444
>gi|160896891|ref|YP_001562473.1| amidase [Delftia acidovorans SPH-1]
gi|160362475|gb|ABX34088.1| Amidase [Delftia acidovorans SPH-1]
Length = 456
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 126/405 (31%), Positives = 195/405 (48%), Gaps = 40/405 (9%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
AR P+ GL ++KD+FD+ G+ T G D A+RTA VV L + GA +G T +
Sbjct: 68 ARSPIEGLPVSVKDLFDIAGFPT-LGGSRLLADAPPAQRTAEVVQRLRQAGAVIVGTTNM 126
Query: 129 DEFAFGITGENKHYGTPVNP----QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVR 184
EFA+ G N HYGTP NP + IPGGSSSG+A++V + A+G+DT G VR
Sbjct: 127 TEFAYSGLGINPHYGTPRNPWQRDEGGGRIPGGSSSGAAISVTDGMAMAAIGSDTGGSVR 186
Query: 185 VPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLA---RNASILHRV--GHVLLQLNA 239
+P++ CG+ G++P+ VSM GVLP S +LD++G LA R + L + G L +L+A
Sbjct: 187 IPSALCGLTGFKPTARRVSMEGVLPLSANLDSIGPLAPSVRCCATLDAILSGEPLGELHA 246
Query: 240 VEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLK 299
P + RL+ ++ L + +A+ LS G +I V +
Sbjct: 247 A-PLQGLRLLAPTNVV-LDGM-DATVAAAWERALSLLS--------QAGAHITHVVVAPF 295
Query: 300 GLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINT 359
G A S TA + + R+ T E+ PR+G R+L +
Sbjct: 296 GELADINSKGGFTA------AEAWAWHRHHIATRLSEY----DPRVG----TRILRGKDI 341
Query: 360 TQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVS-DPPLKLNTKKTYSAEFHDRTLVLS 418
+ + L R + AA+ + D ++V+PTV P + ++ A F L+L
Sbjct: 342 SAADYIDLLARRRQWIAAVSAQMADHDLIVMPTVPVVAPKIADLTQSDEAYFGANGLILR 401
Query: 419 S---IGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVL 460
+ I + GC +++P + E P+ +S G D+ LL L
Sbjct: 402 NPTLINFLDGCA-ISLPCHRAGEAPVGLSLAGLGGQDRRLLSVAL 445
>gi|333893596|ref|YP_004467471.1| amidase [Alteromonas sp. SN2]
gi|332993614|gb|AEF03669.1| amidase [Alteromonas sp. SN2]
Length = 425
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/388 (30%), Positives = 183/388 (47%), Gaps = 18/388 (4%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G A+KD+F ++G T G+PDW H + V LL GAT GKT+ DE A
Sbjct: 43 LKGYGLAVKDLFHIEGLPTAAGNPDWLATHPVPTASNSTVEKLLDAGATFKGKTITDELA 102
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+ + G+NKHY VNP P+HIPGGSSSGSAVAV+A L D LGTDT G +RVPAS+ G+
Sbjct: 103 YSLHGQNKHYPQLVNPVAPAHIPGGSSSGSAVAVSAHLADIGLGTDTGGSIRVPASYQGL 162
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G R +H + ++ + S DTVG + R+ L +V HV L + E D
Sbjct: 163 WGLRTTHNAIPCDNMVALAPSFDTVGWMTRDLDTLEKVSHVCLADASQETLSNTADDATD 222
Query: 253 DIFQLSKVPKL----KTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSP 308
++ V L K + +K +E+L+ + + N G I L A +T+
Sbjct: 223 TTIRIGTVQHLLQSAKHGVLTTKWLETLN--EKADSDNAGFTITPITEHELDLSALNTA- 279
Query: 309 ENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILY 368
AT + LQ E + +W+ P + +++ R+ ++ +
Sbjct: 280 ----ATFRV-------LQGAEIWQQHGQWITDTSPDIAHDIMLRLNWCETISEQEVDDAK 328
Query: 369 KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQ 428
K + + + L + +L+IPT + + + A + L L+SI ++ Q
Sbjct: 329 KQQVAFQEYINSLFETVDVLLIPTTPGIAPRCDADEETLANDRNALLALTSIAGLAELPQ 388
Query: 429 VAIPIGKYNEHPISISFITYHGGDKFLL 456
+ +P+ P +S + G D L+
Sbjct: 389 IHMPLFTLQNAPCGLSLVGKKGSDLALI 416
>gi|146276040|ref|YP_001166200.1| amidase [Novosphingobium aromaticivorans DSM 12444]
gi|145322731|gb|ABP64674.1| Amidase [Novosphingobium aromaticivorans DSM 12444]
Length = 408
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 182/385 (47%), Gaps = 46/385 (11%)
Query: 76 LKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGA-TCIGKTVLDEFAFG 134
L+ AIKD D+ G+ T GS D A A VVT +L + IGK + EFA+G
Sbjct: 39 LRVAIKDCIDIAGWQTRQGSAVLA-DVPPAIANAEVVTCILSDPRWRIIGKARMHEFAYG 97
Query: 135 ITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILG 194
++G N GTP+NP P IPGGSSSGSAVAVA+ L D A+GTDT G VR+PA+ CG++G
Sbjct: 98 VSGLNPACGTPINPFWPDRIPGGSSSGSAVAVASGLADVAIGTDTGGSVRMPAACCGVIG 157
Query: 195 YRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDI 254
++P+ G VS G P SLD +G+ AR +G V + + P + A
Sbjct: 158 FKPTFGLVSRRGAHPAKSSLDCIGIFARE------MGLVEAMMETIAP----GFVPA--- 204
Query: 255 FQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTAT 314
LS+ P L G P N + + G+ +ST+ + A
Sbjct: 205 -TLSRSPTL--------------GLVTPGTSNGIAGYLAAAIAGAGIANRSTALDGMEA- 248
Query: 315 LKALSSVMLSLQRYEFKTIYEEWVKSA----KPRLGYNVFERVLEAINTTQDNIKILYKV 370
A ++ M + R E W A P +G +V R++ A T +++ V
Sbjct: 249 --AFAAGMTIIGR-------ETWAALAPFVSHPGMGDDVRTRLMRASALTDEDLGAAEDV 299
Query: 371 RNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVA 430
R R + L+ LV+PT+ P L+ + +A LV ++SG +A
Sbjct: 300 RAAFRDGVDAALEGVDALVLPTLPVVPPLLSEAEDAAALLPLTRLVRPF--NLSGHPAIA 357
Query: 431 IPIGKYNEHPISISFITYHGGDKFL 455
+P+ + P+S+ + HGGD L
Sbjct: 358 LPLRAAHGVPVSLQLVGRHGGDAAL 382
>gi|381406410|ref|ZP_09931093.1| amidase [Pantoea sp. Sc1]
gi|380735712|gb|EIB96776.1| amidase [Pantoea sp. Sc1]
Length = 443
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 131/415 (31%), Positives = 190/415 (45%), Gaps = 52/415 (12%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
A P+ GL +IKD+FDV+G T GS A +VV LLL GA +GKT +
Sbjct: 60 ALSPIDGLPVSIKDLFDVEGEATRAGSRLLADAPVAAANASVVDKLLLA-GAAIVGKTTM 118
Query: 129 DEFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
EFAF G N HYGTPVNP + IPGGSSSG+AVAVA + A+GTDT G VR+P
Sbjct: 119 TEFAFSGLGINPHYGTPVNPWQREQQRIPGGSSSGAAVAVAEGMCLAAVGTDTGGSVRIP 178
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL----LQLNAVEP 242
A+ CG+ G++P+ ++ G LP S SLD++G++A + + V+ L L +++
Sbjct: 179 AALCGLTGFKPTAKRINQRGTLPLSTSLDSIGVIADDVRSCWLLDSVIADRPLALQSLDV 238
Query: 243 RRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLR 302
R AR FA VP+ + + + + +V Q + LK
Sbjct: 239 RNAR---FA--------VPQTRVLDGLDQ--------------HVAQAWQHAITLLKQAG 273
Query: 303 AQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGY------NVFERVLEA 356
A T TL L + R T YE W K + V R+
Sbjct: 274 AMVTD-----ITLPELDELNAMNARGGI-TAYEAWQWHKKSAQAHPEAYDPQVLVRIQRG 327
Query: 357 INTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYS-----AEFH 411
+ T + LY+ R + + L D L++PTV PL T + S E +
Sbjct: 328 SHLTVQDATELYQQRAAWQQRINAALGDFDALLMPTV---PLVAPTIASLSDAQRYMEIN 384
Query: 412 DRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSL 466
L SI +M C +++P + P+ +S + HG D L+ L + +L
Sbjct: 385 ALMLRNPSIINMLDGCALSLPCHQPGSAPVGLSLASTHGDDARLISWSLAVETAL 439
>gi|424878276|ref|ZP_18301916.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WU95]
gi|392520768|gb|EIW45497.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WU95]
Length = 456
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 120/375 (32%), Positives = 182/375 (48%), Gaps = 41/375 (10%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A KD+FD++G T GS +D A+R A VV LL + G +G+T + EFA
Sbjct: 72 LDGIPIAWKDLFDMEGLPTTAGSVVLAKDM-PAKRDAAVVALLRQAGMVAVGRTNMSEFA 130
Query: 133 FGITGENKHYGTPVNPQ---MPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
F G N HYGTPVNP+ +P IPGGSSSG+ V VAA LV A+GTDT G VR+PA+F
Sbjct: 131 FSGLGINPHYGTPVNPRGTDLP-RIPGGSSSGAGVVVAAGLVPVAMGTDTGGSVRIPAAF 189
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
GI+GY+ + G +M GV P ++SLD++G L R+ + V A R +
Sbjct: 190 NGIVGYKATRGRHAMAGVYPLAKSLDSLGPLCRSVR------------DGVWIDVAMRGL 237
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
A D+ +L L+ + +I G + +A+ +L+ R Q +
Sbjct: 238 TAPDVVEL----PLQGLELIVPENIVFDGAEP-------GVVAAFEAALE--RLQKAGAK 284
Query: 310 NGTATLKALSSVMLSLQRY-------EFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQD 362
+ A + + RY F E R+ + V R TT
Sbjct: 285 VARTVIPAFDEIFELMTRYGPLVTAEAFALHRERLAGPDADRMDHRVVMRTRLGSKTTLP 344
Query: 363 NIKILYKVRNEMRAALQRLLKDDKILVIPTVSD--PPL-KLNTKKTYSAEFHDRTLVLSS 419
+ + R+ + A ++RL+ D++L PTV+ PP+ L +++TL ++
Sbjct: 345 DYLAILDARSRLIADVERLVG-DRLLAFPTVAHVAPPIGPLEQDDELFFATNNKTLRNTA 403
Query: 420 IGSMSGCCQVAIPIG 434
+G+ C V+IP G
Sbjct: 404 LGNFLDWCGVSIPCG 418
>gi|147834578|emb|CAN74137.1| hypothetical protein VITISV_032092 [Vitis vinifera]
Length = 130
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/90 (76%), Positives = 78/90 (86%)
Query: 466 LQEQVNIASNLVPLPDTNGSIDASELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATY 525
+ ++ + SN + LPDTNG +DASELLKEKGNAAFKG+QWNKAVNYY+EAIKLN T+ATY
Sbjct: 31 FKSKLVLHSNSLXLPDTNGDMDASELLKEKGNAAFKGRQWNKAVNYYTEAIKLNETNATY 90
Query: 526 YSNRAAAYLELGCFQQAEEDCSKTISLDKK 555
Y NRAAAYLELGCFQQA EDCSK I LDKK
Sbjct: 91 YCNRAAAYLELGCFQQAVEDCSKAILLDKK 120
>gi|418298732|ref|ZP_12910569.1| hypothetical protein ATCR1_14441 [Agrobacterium tumefaciens
CCNWGS0286]
gi|355536058|gb|EHH05337.1| hypothetical protein ATCR1_14441 [Agrobacterium tumefaciens
CCNWGS0286]
Length = 452
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 122/396 (30%), Positives = 182/396 (45%), Gaps = 29/396 (7%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A KD+FD++G T GS D A R A VVT L + G CIG+T + EFA
Sbjct: 70 LDGIPVAWKDLFDLEGMATTAGSTVLA-DDAPASRDADVVTALKQAGMICIGRTNMSEFA 128
Query: 133 FGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
F G N HYGTP NP +PGGSSSG+ V VAA LV A+GTDT G VR+PA+F
Sbjct: 129 FSGLGINPHYGTPRNPASKDGHRLPGGSSSGAGVTVAAGLVPVAIGTDTGGSVRIPAAFN 188
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIF 250
G++GY+ S G SM GV P ++SLD++G L +AV A R
Sbjct: 189 GVVGYKASRGRYSMRGVYPLAKSLDSLGPLTHTVQ------------DAVWVDAAMRGKA 236
Query: 251 ADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPEN 310
A D+ + P L + ++ G ++ Q + V + +R Q+ +
Sbjct: 237 AADV---QRAP-LAGLSLVVPETVFFDGIEDGVAAAFEQAVERLVRAGASVRRQAFPIFS 292
Query: 311 GTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKV 370
L +++ + + E V +A R+ V R N + + + +
Sbjct: 293 ELFDLIKEKGALVTAEAFTLHKTRLEGVDAA--RMDPRVVARTRLGANISMPDYIAIIEA 350
Query: 371 RNEMRAALQRLLKDDKILVIPTVSD-----PPLKLNTKKTYSAEFHDRTLVLSSIGSMSG 425
R M AA ++ ++LV PT+ PL N ++ + +TL + IG+
Sbjct: 351 RERMTAAFSGMIGRQELLVSPTLPHVAAKVAPLLDNDDAFFA--MNAKTLRNTQIGNFFD 408
Query: 426 CCQVAIPIGKYN-EHPISISFITYHGGDKFLLDTVL 460
C V+IP G + P+ + HG D +L +
Sbjct: 409 LCGVSIPCGTGEADMPVGLLLSGLHGSDDHVLSVAM 444
>gi|209546175|ref|YP_002278065.1| hypothetical protein Rleg2_5792 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209539032|gb|ACI58965.1| Amidase [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 456
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 120/383 (31%), Positives = 183/383 (47%), Gaps = 57/383 (14%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A KD+FD++G T GS D A+R A VV L + G IG+T + EFA
Sbjct: 72 LDGIPIAWKDLFDIEGLATTAGSVVLAADA-PAKRDAAVVGFLRQAGMVAIGRTNMSEFA 130
Query: 133 FGITGENKHYGTPVNPQ---MPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
F G N HYGTPVNP+ +P IPGGSSSG+ VAVAA LV A+GTDT G VR+PA+F
Sbjct: 131 FSGLGINPHYGTPVNPRGNDLP-RIPGGSSSGAGVAVAAGLVPVAMGTDTGGSVRIPAAF 189
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLAR--------NASILHRVGHVLLQLNAVE 241
GI+GY+ + G +M GV P ++SLD++G R +A++ R+ +++
Sbjct: 190 NGIVGYKATRGRHAMDGVYPLARSLDSLGPFCRGVKDAVWIDAAMRGRIAPDVVE----R 245
Query: 242 PRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGL 301
P +A L+ ++I P + I +E L G ++A
Sbjct: 246 PLQALELLVPENIVFDGAEPGV--IAAFEAGLERLQ--------RAGVHVAR-------- 287
Query: 302 RAQSTSPENGTATLKALSSVMLSLQRY-------EFKTIYEEWVKSAKPRLGYNVFERVL 354
A + A ++ + RY F +E R+ + V R
Sbjct: 288 -----------AVIPAFDAIFDLMTRYGPLVTAEAFALHHERLAGPDADRMDHRVVMRTR 336
Query: 355 EAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSD--PPLK-LNTKKTYSAEFH 411
T+ + + + R M A ++RL+ D++L PTV+ PP+ L +
Sbjct: 337 LGSRTSLADYLAILEARKRMIADVERLVG-DRLLAFPTVAHVAPPIGPLEGDDELFFATN 395
Query: 412 DRTLVLSSIGSMSGCCQVAIPIG 434
++TL +++G+ C V+IP G
Sbjct: 396 NKTLRNTALGNFLDWCGVSIPCG 418
>gi|424908949|ref|ZP_18332326.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. viciae USDA 2370]
gi|392844980|gb|EJA97502.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. viciae USDA 2370]
Length = 452
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 126/400 (31%), Positives = 188/400 (47%), Gaps = 29/400 (7%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
+R L G+ A KD+FD++G VT GS D A R A VVT L + G CIG+T +
Sbjct: 66 SRGLLDGIPVAWKDLFDLEGTVTTAGSTVLA-DDEPASRDADVVTALKQAGMICIGRTNM 124
Query: 129 DEFAFGITGENKHYGTPVNP-QMPSH-IPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
EFAF G N HYGTP NP H +PGGSSSG+ VAVAA LV A+GTDT G VR+P
Sbjct: 125 SEFAFSGLGINPHYGTPRNPLSTDGHRLPGGSSSGAGVAVAAGLVPVAIGTDTGGSVRIP 184
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRAR 246
A+F G++GY+ S G SM GV P ++SLD++G L R +AV A
Sbjct: 185 AAFNGVVGYKASRGRYSMRGVYPLAKSLDSLGPLTRTVQ------------DAVWVDAAM 232
Query: 247 RLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQST 306
R A D+ +VP L ++ ++ G ++ Q + V + +R Q+
Sbjct: 233 RGRTAADV---QRVP-LSSLSLVVPETVFFDGIEDEVAAAFKQAVDRLVRAGASVRRQAF 288
Query: 307 SPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKI 366
+ L +++ + + E +A R+ V R N + +
Sbjct: 289 PIFSELFELIKEKGALVTAEAFALHKTRLEGADAA--RMDPRVVARTKLGANISVPDYLA 346
Query: 367 LYKVRNEMRAALQRLLKDDKILVIPTVSD-----PPLKLNTKKTYSAEFHDRTLVLSSIG 421
+ R M AA ++ ++L+ PT+ PL L + + A + +TL + IG
Sbjct: 347 IIDARERMTAAFSGMIGKGELLMSPTLPHVAARVAPL-LQSDDAFFA-MNAKTLRNTQIG 404
Query: 422 SMSGCCQVAIPIGKYNE-HPISISFITYHGGDKFLLDTVL 460
+ C V+IP G + P+ + G D +L +
Sbjct: 405 NFFDLCGVSIPCGTGDAGMPVGLLLSGLDGTDDHVLGAAM 444
>gi|417862463|ref|ZP_12507516.1| hypothetical protein Agau_L300599 [Agrobacterium tumefaciens F2]
gi|338820867|gb|EGP54838.1| hypothetical protein Agau_L300599 [Agrobacterium tumefaciens F2]
Length = 452
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 127/404 (31%), Positives = 187/404 (46%), Gaps = 45/404 (11%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A KD+FD++G T GS D A R A VVT L + G IG+T + EFA
Sbjct: 70 LDGIPVAWKDLFDLEGMATTAGSTVLSNDA-PASRDADVVTALKEAGMISIGRTNMSEFA 128
Query: 133 FGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
F G N HYGTP NP + +PGGSSSG+ VAVAA LV A+GTDT G VR+PA+F
Sbjct: 129 FSGLGINPHYGTPRNPVSKDGHRLPGGSSSGAGVAVAAGLVPVAIGTDTGGSVRIPAAFN 188
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRA----- 245
G++GY+ S G SM GV P ++SLD++G L R V + +A + RA
Sbjct: 189 GVVGYKASRGRYSMRGVYPLAKSLDSLGPLTRTVQDAIWVDAAMRGRSAADIARAPLSGL 248
Query: 246 ----RRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGL 301
+F D I + V + + +++A S+ P + I
Sbjct: 249 SLVVPETVFFDGIEEGVAVAFEQAVERLARAGASVRRQAFPLFSELFDLI---------- 298
Query: 302 RAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQ 361
+ T +A + L+ + + V A+ RLG N+ +
Sbjct: 299 -----KEKGALVTAEAFALHKARLESADAARMDPRVV--ARTRLGANI---------SMP 342
Query: 362 DNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLK----LNTKKTYSAEFHDRTLVL 417
D I IL + R M AA ++ D++LV PT+ K +++ + A + +TL
Sbjct: 343 DYIGIL-EARESMTAAFSGMIGKDELLVSPTLPHVAAKVAPLIDSDDAFFA-MNAKTLRN 400
Query: 418 SSIGSMSGCCQVAIPIGKYNE-HPISISFITYHGGDKFLLDTVL 460
+ IG+ C V+IP G P+ + HG D +L +
Sbjct: 401 TQIGNFFDLCGVSIPCGTGEAGMPVGLLLSGLHGSDDHVLGVAM 444
>gi|414174784|ref|ZP_11429188.1| hypothetical protein HMPREF9695_02834 [Afipia broomeae ATCC 49717]
gi|410888613|gb|EKS36416.1| hypothetical protein HMPREF9695_02834 [Afipia broomeae ATCC 49717]
Length = 431
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 185/398 (46%), Gaps = 39/398 (9%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
+R PL G IKD+FD+KG VT GS A A +VT L + GA KT +
Sbjct: 51 SRGPLDGAVITIKDLFDIKGEVTRAGSKVLPARSKPATADAAIVTRLREAGAVIAAKTNM 110
Query: 129 DEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPAS 188
EFA+ G N HYGTP NP +PGGSSSG+AVAV + + A+GTDT G R+PA+
Sbjct: 111 TEFAYSGLGANPHYGTPGNPADRKRVPGGSSSGAAVAVGDGVGEIAIGTDTGGSTRIPAA 170
Query: 189 FCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRL 248
FCG+ G++P+ V G P S +LD++G +AR+ + +L
Sbjct: 171 FCGVTGFKPTVKRVPRTGAFPLSFTLDSIGPIARSVADCANADAIL-------------- 216
Query: 249 IFADDIFQLSKVPKLKTIH---VISKAIESLS---GYQNPEHM-NVGQYIASNVPSLKGL 301
A + P L + V S IE L G P + +G + + +L L
Sbjct: 217 --AGETPSPLSPPALGDVRVGLVQSYPIEGLDDVVGKAYPLALARLGSHWKGSDITLDAL 274
Query: 302 RAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQ 361
T+ E G + E I+ + A + NV R+L + +
Sbjct: 275 SIMHTANERG------------GVAPPEAYAIHRTLLAEAGEGVDPNVRARLLRSEKISA 322
Query: 362 DNIKILYKVRNEMRAALQRLLKDDKILVIPTVS--DPPL-KLNTKKTYSAEFHDRTLVLS 418
+ + + R A + L +LV+PTV P + +++T ++++ + + + L+ +
Sbjct: 323 ADYILALRDRERGIAQMDALFDKVDVLVMPTVQIVAPTMDEVSTPESFN-KRNVQALMNT 381
Query: 419 SIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+I + C +++PI N P+ + + HGGD+ LL
Sbjct: 382 AIWNFFDTCAISLPIRLGNALPVGLMLVGRHGGDRKLL 419
>gi|389863205|ref|YP_006365445.1| amidase [Modestobacter marinus]
gi|388485408|emb|CCH86952.1| Amidase [Modestobacter marinus]
Length = 535
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 171/384 (44%), Gaps = 27/384 (7%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ A+KD+ V G+ G G+P + A +A V+ LL GA G DE
Sbjct: 156 PLDGVGLAVKDLVGVAGHPIGAGNPVKLAESAPAAASAPVLAALLAAGAHVRGIARTDEL 215
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+ ++G N H G+P NP + GGS++G A AVA D +GTDT G +RVPAS+CG
Sbjct: 216 AYSLSGTNVHSGSPANPWGAGLVVGGSTNGPASAVARGTADVGVGTDTAGSIRVPASYCG 275
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
+ G RP+HG V + GVLP + S DT+G L R A +LHRV VLL A L+ A
Sbjct: 276 LHGLRPTHGAVPLDGVLPLAPSFDTLGWLTRGAGLLHRVAGVLLPAAA----PVTSLVLA 331
Query: 252 DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENG 311
+D+ L+ P + + + + SG +P + A S E
Sbjct: 332 EDLLALADPPVAAALAAAADELAAASG----------------LPLSRAALATSEERERW 375
Query: 312 TATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVR 371
+A +Q E + +W+ + LG + +R + T D +
Sbjct: 376 FTAFRA-------VQGAEAWAAHGDWITAHPGVLGPGIAQRFADGAAVTPDQLAAGRAAV 428
Query: 372 NEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAI 431
E RAAL L +++P S + AE+ TL L+ + + G
Sbjct: 429 AEGRAALAGRLPAGVAVLMPAASSTAPPITADPARKAEYRAATLRLTCLAGVGGLPVAVA 488
Query: 432 PIGKYNEHPISISFITYHGGDKFL 455
P + P+ ++ + G D L
Sbjct: 489 PAALVDGLPVGLAVLGAGGTDTAL 512
>gi|170695017|ref|ZP_02886166.1| Amidase [Burkholderia graminis C4D1M]
gi|170140115|gb|EDT08294.1| Amidase [Burkholderia graminis C4D1M]
Length = 462
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 120/396 (30%), Positives = 187/396 (47%), Gaps = 43/396 (10%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
P+AG+ +IKD+ DVKG VT G+ D A A VV+ L +G IG+T + F
Sbjct: 86 PIAGIPVSIKDLLDVKGEVTRAGALALD-DMPVAACDAPVVSRLRSSGVVLIGRTNMTPF 144
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
AF + G N H+GTP NP IPGGSSSG+AV+VA +V A+G+DT+G +RVPA+ CG
Sbjct: 145 AFSVVGLNSHFGTPGNPWDRDRIPGGSSSGAAVSVADGMVAAAIGSDTVGSIRVPAALCG 204
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLAR---NASILHRV--GHVLLQLNAVEPRRAR 246
++G++P+ TV + G +P S +LD++G LAR + + +H V G + L+ V R
Sbjct: 205 VVGFKPTQRTVPLSGAVPLSPTLDSIGPLARSVADCAAIHAVISGEAAVPLDMVG---VR 261
Query: 247 RLIFADDIFQLSKVPK---LKTIHV-ISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLR 302
L F VP+ L + + + +A E + + Q S K LR
Sbjct: 262 GLTFG--------VPREIVLDDLDIEVGRAFERACARISEAGARIEQV------SFKALR 307
Query: 303 AQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQD 362
NG ++ + + E + + SA+ R G + D
Sbjct: 308 --EVDALNGNRVIQLAEAYAWHRELLERRGADYDPHISARVRSGAQIL---------AAD 356
Query: 363 NIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGS 422
+ +L R MR L++PT S + + +AE RT +L + G
Sbjct: 357 YLSMLSHRRRLMR-EFDAATSGFDALLLPTTS--MIAPTFDECMAAEDAVRTKLLRNTGP 413
Query: 423 MS--GCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+ CC +++P+ + E P+ + + GD LL
Sbjct: 414 FNFLDCCSISLPVHRPGEAPVGLMVAGHRDGDWQLL 449
>gi|152994488|ref|YP_001339323.1| amidase [Marinomonas sp. MWYL1]
gi|150835412|gb|ABR69388.1| Amidase [Marinomonas sp. MWYL1]
Length = 411
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 189/405 (46%), Gaps = 40/405 (9%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL+GL+ A+KD+F + G T G+P W H +TA V+ LL GA GKT+ DE
Sbjct: 34 PLSGLRLAVKDLFHMAGLPTSAGNPTWLATHPIPTKTASSVSALLSEGAIFCGKTITDEL 93
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+ + G+N HYGTP NP P +PGGSSSGSAVAV++ L D LGTDT G +RVPAS+ G
Sbjct: 94 AYSLNGQNIHYGTPSNPVTPDRLPGGSSSGSAVAVSSGLADIGLGTDTGGSIRVPASYNG 153
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
+ G RP+HG + ++ + S DTVG L ++ + L + VLL+ + LI
Sbjct: 154 LFGLRPTHGVIPSDNMVALAPSFDTVGWLTKDLTTLEKTARVLLK-SKFSKEFGNVLIAN 212
Query: 252 DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENG 311
+ I Q++ V +L+T L ++ H I + + K
Sbjct: 213 NLIDQVAHVKELRT---------QLKTWREQGHFAKESSIVIDTKAWK------------ 251
Query: 312 TATLKALSSVMLSLQRYEFKTIYEEWVKSA-----------KPRLGYNVFERVLEAINTT 360
S +LQ E + +W+ S + +++ R +
Sbjct: 252 ------TSETFRTLQGAEIWHEHGKWINSLNSSDSLSEAEKQSVFAPDIWLRFHWCKTIS 305
Query: 361 QDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSI 420
++ + R L+ + + +L+IPT + + A + ++ + +++I
Sbjct: 306 AADVATAQQQRQRFVDWLEHEI-EGSVLIIPTTPGLAPLFDAAEDELAAYRNQLMDITAI 364
Query: 421 GSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDS 465
++G Q+ +P+ + P +S + G D L++ L +S
Sbjct: 365 AGLAGLPQLHLPVCILDGAPCGLSLVGSKGSDLALIEFAKHLMES 409
>gi|118592593|ref|ZP_01549984.1| Amidase [Stappia aggregata IAM 12614]
gi|118434940|gb|EAV41590.1| Amidase [Stappia aggregata IAM 12614]
Length = 383
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/330 (33%), Positives = 149/330 (45%), Gaps = 44/330 (13%)
Query: 75 GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFG 134
GL A+KD D+ G VT GS H A VV LL +G IGK + E AFG
Sbjct: 21 GLSVAVKDCIDIAGEVTACGS---AAVSHAPSEHADVVKSLLASGCKIIGKANMHELAFG 77
Query: 135 ITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILG 194
+TG N +GTPVNP P IPGGSSSGSAVAVAA L DF++GTDT G VR PA CGI G
Sbjct: 78 VTGVNTVFGTPVNPNWPDRIPGGSSSGSAVAVAAGLCDFSVGTDTGGSVRQPAICCGIYG 137
Query: 195 YRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDI 254
+P+ +S G P SLD VG+ AR ++ L + + A +P
Sbjct: 138 LKPTFARISRKGCHPADSSLDCVGVFARTSAGLTQA------MAASDPSFKTE------- 184
Query: 255 FQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTAT 314
+ P+L + +P+ G A+ L GL T
Sbjct: 185 -TCTTAPRLAWVST------------DPDPS--GDSFATLSRKLPGLE---------RIT 220
Query: 315 LKALSSVM---LSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVR 371
L A +++ YE + ++ A+P LG +V R+ +A + +K VR
Sbjct: 221 LDAFDEAFAAGMTIISYETAQAFGHLLE-AEPPLGQDVKARIAKAQSVKSAEVKAAEAVR 279
Query: 372 NEMRAALQRLLKDDKILVIPTVSDPPLKLN 401
A+ L+ L++P + P L
Sbjct: 280 TRFTEAVDTALEQCDALIMPALPTVPPTLE 309
>gi|119946560|ref|YP_944240.1| amidase [Psychromonas ingrahamii 37]
gi|119865164|gb|ABM04641.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
[Psychromonas ingrahamii 37]
Length = 411
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 185/410 (45%), Gaps = 25/410 (6%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R L+G +F KDVFDV+GYVTG G+P W H A T+ ++T LL GA C G+
Sbjct: 20 RGVLSGYRFVFKDVFDVQGYVTGAGNPTWLMSHEPALHTSPIITQLLIQGAHCSGRVQSS 79
Query: 130 EFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
E A G G N HYGT +N P G SS + AVA DFALG D G +R+ AS+
Sbjct: 80 ELACGFDGMNTHYGTAINHLAPKCQS-GGSSSCSAAVARGDGDFALGIDAAGEIRISASY 138
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
CG+ G R ++ + + ++S DT GLL RN +++ V L R +
Sbjct: 139 CGLFGLRATYAALPLDHSFSLAKSFDTAGLLTRNLTVMSNVVTSLF-------REQPPVD 191
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
+D+F I V +A+E + E N +A N + + + + +
Sbjct: 192 QFEDVF----------IFVEKRALELMDSEVKEELTNKLNRLARN----RYVVSTDSLLD 237
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDN-IKILY 368
+L+ L+ +Q YE + EW+ + + +V R ++ N + D ++
Sbjct: 238 ICEVSLEELAEWFSIIQGYELIQEHSEWLAEHQSAVTKDVSRRFDKSKNISIDEYVEAKQ 297
Query: 369 KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQ 428
K+ N + L L +PT P +L + R L L+++ S+ G Q
Sbjct: 298 KMANFSTLFIYLLKSKGGWLCLPTTPGLPPELKQSVNSLIYYRKRLLGLTALASLCGLPQ 357
Query: 429 VAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSL--QEQVNIASNL 476
+ +P+GK N +S I +K L+ L SL E VN S L
Sbjct: 358 LHLPLGKINGKSYGLSLIGMPNSEKKLIKQGQYLLQSLAVNESVNSKSWL 407
>gi|444377811|ref|ZP_21177019.1| hypothetical protein D515_1695 [Enterovibrio sp. AK16]
gi|443678182|gb|ELT84855.1| hypothetical protein D515_1695 [Enterovibrio sp. AK16]
Length = 384
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 174/391 (44%), Gaps = 30/391 (7%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LA + + D ++ VTG G P W H A+ A VV+ L+ +G IGK +D+F
Sbjct: 23 LARQRLVVSDNVGIQDMVTGIGIPAWADGHEPAKNDAHVVSTLMHSGCRLIGKAQVDDFG 82
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
I+G N NP P GGSSSG+A+AVA +G D G V +PAS+CG+
Sbjct: 83 TSISGLNPFLANLKNPVSPEARLGGSSSGAAIAVAKGKATIGIGNDCCGGVLIPASYCGL 142
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
GYRPS G V + G+ P S S D VG + R+ L +V +P RA RL
Sbjct: 143 YGYRPSQGMVDLRGITPFSPSFDAVGFMTRHLPTLEQVAEKCW----TKPPRAGRL---K 195
Query: 253 DIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGT 312
+I S + H + +IE+L ++ E ++ + +++P+L L
Sbjct: 196 NIVNASSL-----FHEL-LSIEALLEWE--EKLSKSKIFRNDMPNLSKL----------- 236
Query: 313 ATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRN 372
TL ++ + E Y +W+ KP+ E + + + + K R
Sbjct: 237 -TLTQAHNIHSVILGREIDLQYGQWLDVHKPKFSEETEEHLKQIRGKSFKDFVETKKKRE 295
Query: 373 EMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIP 432
+LQ ++L+IPT P + T+ F L +I ++G Q+ +P
Sbjct: 296 FFSDSLQGFFGSGEVLMIPT---SPGQAPTEMFMDETFLINQRRLYAIAEVAGLAQLTLP 352
Query: 433 IGKYNEHPISISFITYHGGDKFLLDTVLDLY 463
+ + P+ +S + + G D+ + + Y
Sbjct: 353 LLMVDGTPMGVSLLAHPGEDRLVFEAAARWY 383
>gi|390958544|ref|YP_006422301.1| amidase [Terriglobus roseus DSM 18391]
gi|390413462|gb|AFL88966.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Terriglobus roseus DSM 18391]
Length = 444
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 182/398 (45%), Gaps = 41/398 (10%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
QPL GL ++KD+FDV G VT GS + A + + VV L GA IG+T + E
Sbjct: 65 QPLLGLPVSVKDLFDVAGEVTTAGSVVLA-NAAPAAKDSSVVARLRAAGAVLIGRTNMTE 123
Query: 131 FAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPAS 188
FA+ G N HYGTP NP + IPGGSSSG+AV+V + A+GTDT G VR+PA+
Sbjct: 124 FAYSGLGLNPHYGTPANPWDRANRRIPGGSSSGAAVSVTDLMAAAAIGTDTGGSVRIPAA 183
Query: 189 FCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL-----LQLNAVEPR 243
CG++G++P+ V M G++P ++SLD+VG +A R+ VL L
Sbjct: 184 LCGLVGFKPTARRVPMDGIVPLARSLDSVGPIAPTVECCARLDAVLSGDFYRPLETKPLT 243
Query: 244 RARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRA 303
R R I + + P AI+S + +P H + I ++
Sbjct: 244 RMRFGILQGYVLEGLDEPTAFAFQEALLAIQSAGAHTDPVHFDALNRIPAS--------- 294
Query: 304 QSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDN 363
N TA +A + + ++S+ R +V R+L +
Sbjct: 295 ------NQTAAAEAFA-------------WHRNLLESSGHRYDPHVSARILHGAGMLAAD 335
Query: 364 IKILYKVRNEMRAALQRLLKDDKILVIPTVS--DPPLKLNTKKTYSAEFHDRTLVL--SS 419
L + R E+ A + L +++PT PP+ + + A FH +L +S
Sbjct: 336 FLDLMQARREIIAEAENLFAPYDAILLPTTPWIAPPIA-ELEASDDAYFHANGAMLRNTS 394
Query: 420 IGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
I + C ++IPI + P+ + G D+ +L+
Sbjct: 395 IFNFLDGCALSIPIHRPGTAPVGLMLANSAGLDRQVLE 432
>gi|402701981|ref|ZP_10849960.1| amidase [Pseudomonas fragi A22]
Length = 446
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 126/419 (30%), Positives = 188/419 (44%), Gaps = 89/419 (21%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAGL +IKD+FDV G +T GS + A R AVVV L GA +G+T + EFA
Sbjct: 68 LAGLPVSIKDLFDVAGQITASGS-SLLAEAPAASRDAVVVERLRAAGAIVLGRTNMSEFA 126
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
F G N HYGTP+ P I GGSSSG+AV+VA ++ LGTDT G +R+PA+FC +
Sbjct: 127 FSGLGLNPHYGTPLTPCAEQRIAGGSSSGAAVSVALEMAVAGLGTDTGGSIRIPAAFCNL 186
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G++PS V + G P + SLD++G L R+ AD
Sbjct: 187 TGFKPSASRVPLTGTFPLAPSLDSIGALTRS--------------------------VAD 220
Query: 253 DIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSP---- 308
I L ++ LSG Q +A+ +PSL GLR T
Sbjct: 221 SIL-LDRI---------------LSGEQ----------LATPMPSLAGLRLAVTRDFVLD 254
Query: 309 --ENGTA-----TLKALSSVMLSLQRYEFKTIYEEWVKSAKPRL----GYNVFERVLEAI 357
+ A +L L+ S++ ++F +++ +A L ++ + LE
Sbjct: 255 QLDETVAVAFERSLGLLAEAGASIRWFDFPELHQLPRINAAGGLTAAEAWHGHRQWLEGD 314
Query: 358 NTTQDNIKILYKVRN----------EMRAALQRL-------LKDDKILVIPTVSDPPLKL 400
+ Q + ++ ++R + +A QRL L D ++P+V+ P KL
Sbjct: 315 DAQQYDARVAQRIRRGAAIGAADYLDTQAERQRLIAIARERLGDADAWLMPSVAVVPPKL 374
Query: 401 NTKKTYSAEFHDRTLVL---SSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
T + F LVL S I + GC +++P E P+ +S HG D +L
Sbjct: 375 ADLATDESFFAANGLVLRNTSVINFLDGCA-LSLPCQLAEELPVGLSIAGLHGQDARVL 432
>gi|111022991|ref|YP_705963.1| amidase [Rhodococcus jostii RHA1]
gi|110822521|gb|ABG97805.1| possible amidase [Rhodococcus jostii RHA1]
Length = 454
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 177/402 (44%), Gaps = 31/402 (7%)
Query: 67 PAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKT 126
P PLAG++ A+ D++ V G G GS + TA VV LL GA +G
Sbjct: 77 PTGDGPLAGMRLAVTDLYAVAGQQIGAGSGRRLAEAPVETGTAAVVARLLGQGARVVGLA 136
Query: 127 VLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
D+ +G +G N+ +GTP NP+ +PGG++SG+A AVA D LG DT G VR+P
Sbjct: 137 QTDDLGYGHSGINQQFGTPPNPRAEDRLPGGATSGAASAVAQGSADIGLGIDTTGSVRIP 196
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRAR 246
AS+ G+ G+ PS G VS G+ P S + DT + + L V LL L A P R+
Sbjct: 197 ASYQGLYGFAPSRGAVSTDGLFPLSPTFDTPAWVCGDLDTLVAVSGALLPLTAETPFRS- 255
Query: 247 RLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQST 306
+ +D I +++ L + +L+ ++ S++P L T
Sbjct: 256 -ALTSDGINAVAEAGALGAVR------RALTAWEK-----------SSLPRL-------T 290
Query: 307 SPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKI 366
+ L ++++Q YE ++ +WV A LG +A +
Sbjct: 291 WTDTDIGRLPDWYDAVVAVQGYEAWRLHGDWVSGAMTSLGDEPGRNFADASRIWESTYGR 350
Query: 367 LYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDR---TLVLSSIGSM 423
E + + D +L+ T S PP + T F + T +L+ + ++
Sbjct: 351 KLIKLGEASQTITAYVGDSLLLLPATSSTPPER--TSYPSGDRFRNTMRATGMLTCLATI 408
Query: 424 SGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDS 465
SG +P+ + P+ + + HG D+ +L V L S
Sbjct: 409 SGLPNATVPLRTDDGVPVGLCLVGPHGRDRDVLAVVAGLGGS 450
>gi|226365496|ref|YP_002783279.1| amidase [Rhodococcus opacus B4]
gi|226243986|dbj|BAH54334.1| putative amidase [Rhodococcus opacus B4]
Length = 454
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 180/407 (44%), Gaps = 41/407 (10%)
Query: 67 PAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKT 126
P PL GL+ A+ D++ V G G GS + TA VV LL GA +G
Sbjct: 77 PTGDGPLTGLRLAVTDLYAVAGQQIGAGSGRRLAEAPVETGTAAVVARLLGQGARVVGLA 136
Query: 127 VLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
D+ +G +G N+ +GTP NP+ +PGG++SG+A AVA D LG DT G VR+P
Sbjct: 137 QTDDLGYGHSGVNQQFGTPPNPRAEDRLPGGATSGAASAVAQGGADIGLGVDTTGSVRIP 196
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRAR 246
AS+ G+ G+ PS G V+ G+ P S + DT + + L V LL L A P R
Sbjct: 197 ASYQGLYGFAPSRGAVATDGLFPLSPTFDTPAWVCSDLDTLVAVSGALLPLTAETPFRG- 255
Query: 247 RLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQST 306
+ +D I +++ L + +L+ ++ S++P L T
Sbjct: 256 -ALTSDGINAVAEAGALGAVR------RALTAWEK-----------SSLPRL-------T 290
Query: 307 SPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLG------YNVFERVLEAINTT 360
+ L ++ +Q YE ++ +WV A LG + R+ E T
Sbjct: 291 WTDTDIGRLPDWYDAVVDVQGYEAWRLHGDWVSQAMSSLGTEPGRNFADASRIWE--TTY 348
Query: 361 QDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSD--PPLKLNTKKTYSAEFHDRTLVLS 418
+ +L + + A + D +L++P S P K +T T +L+
Sbjct: 349 GRKLTMLAEASQTITAYVG-----DSLLLLPATSSVAPERKGDTSGGRFRNTMRTTGMLT 403
Query: 419 SIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDS 465
+ S+SG +P+ + P+ + + +G D+ +L V L D+
Sbjct: 404 CLASISGLPNATVPLRTDDGSPVGLCLVGPYGRDRDVLAVVASLGDT 450
>gi|374998840|ref|YP_004974339.1| putative amidase [Azospirillum lipoferum 4B]
gi|357426265|emb|CBS89165.1| putative amidase [Azospirillum lipoferum 4B]
Length = 400
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 112/339 (33%), Positives = 152/339 (44%), Gaps = 43/339 (12%)
Query: 75 GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFG 134
GL A+KD D+ G+ T GS + + A R A VV LL G +GKT + E A+G
Sbjct: 23 GLTVAVKDCLDIAGFPTRCGSAAFDQ-APAASRHAAVVDALLAAGCRIVGKTTMHELAYG 81
Query: 135 ITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILG 194
+TG N +GTPVNP P IPGGSSSGSAVAVAA LVDFA+GTDT G VR PA+ CG+ G
Sbjct: 82 MTGINARFGTPVNPGWPELIPGGSSSGSAVAVAAGLVDFAVGTDTGGSVRQPAACCGVFG 141
Query: 195 YRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDI 254
+P+ G + G P SLD +G LAR+ +L R ++ D
Sbjct: 142 MKPTFGRIDRRGASPADSSLDCIGPLARSIGMLERA-----------------MVAMDPG 184
Query: 255 F----QLSKVPKLKTI-HVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
F L + P+L + H + P H ++ +P L
Sbjct: 185 FLPAKGLDRPPRLALLRHPDGAGADREWTGLLPAHAAAMPWV--ELPLLD---------- 232
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
A + M + R + + A LG +V R+ A T + +
Sbjct: 233 ------DAFRAGMTVIARETHRAFGHLLSEPAA--LGDDVRARLDAAGRVTDEELARAED 284
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSA 408
VR A + LL D LV P + PP L+ + A
Sbjct: 285 VRARFTAEVDALLADCDALVTPALPMPPPGLDAARDPKA 323
>gi|269795028|ref|YP_003314483.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase subunit A [Sanguibacter
keddieii DSM 10542]
gi|269097213|gb|ACZ21649.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Sanguibacter keddieii DSM 10542]
Length = 535
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 177/393 (45%), Gaps = 26/393 (6%)
Query: 66 PPAARQ-PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIG 124
P AR PLAG+ A+KD+F V G TG G+P W A +T L GA G
Sbjct: 161 PSVARGLPLAGVGIAVKDLFAVAGQRTGAGNPAWLAQAEVETVDAAALTSFLTAGAHVEG 220
Query: 125 KTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVR 184
DE AF + G N H+GTP N P I GGS+SG A AVAA L D ALGTDT G VR
Sbjct: 221 VAHTDELAFSLAGTNVHHGTPPNAAAPGRITGGSTSGPAAAVAAGLADLALGTDTAGSVR 280
Query: 185 VPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRR 244
VPAS+CG+ G R +H VS G++ + S DTVG+L R +L LL V
Sbjct: 281 VPASYCGLYGLRTTHDAVSRAGLVGLAPSFDTVGVLTRGGPLLASAVETLLPEQDVT--T 338
Query: 245 ARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQ 304
RL+ + +L++ P ++ + S + + +P
Sbjct: 339 VDRLVVVPALLELAE-PDVRLAVEAALLALS---------------VRTGIPV------- 375
Query: 305 STSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNI 364
T+ E G L++ + +LQ+ E + +V++ V ER L T+ ++
Sbjct: 376 ETAGEVGPGALESWFAAFRTLQQAEAWETHGAFVQAHPGAFEPAVEERFLAGSAVTETDV 435
Query: 365 KILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMS 424
+ R L RLL +L +P+ S + + TL L+ + S+
Sbjct: 436 ARAQATITQARTTLARLLPHGTVLALPSTSSVAPRTDAGPAEIDLTRAATLRLTCLASLG 495
Query: 425 GCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
G +++P + P+ + + G D+ L+D
Sbjct: 496 GLPALSVPTPRVGSLPVGLCLVAAPGQDRTLVD 528
>gi|397736411|ref|ZP_10503093.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Rhodococcus sp. JVH1]
gi|396927601|gb|EJI94828.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Rhodococcus sp. JVH1]
Length = 454
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 177/402 (44%), Gaps = 31/402 (7%)
Query: 67 PAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKT 126
P PLAG++ A+ D++ V G G GS + TA VV LL GA +G
Sbjct: 77 PTGDGPLAGMRLAVTDLYAVAGQQIGAGSGRRLAEAPVETGTAAVVARLLGQGARVVGLA 136
Query: 127 VLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
D+ +G +G N+ +GTP NP+ +PGG++SG+A AVA D LG DT G +R+P
Sbjct: 137 QTDDLGYGHSGINQQFGTPPNPRAEDRLPGGATSGAASAVAQGSADIGLGIDTTGSIRIP 196
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRAR 246
AS+ G+ G+ PS G VS G+ P S + DT + + L V LL L A P R+
Sbjct: 197 ASYQGLYGFAPSRGAVSTDGLFPLSPTFDTPAWVCGDLDTLVAVSGALLPLTAETPFRS- 255
Query: 247 RLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQST 306
+ +D I +++ L + +L+ ++ S++P L T
Sbjct: 256 -ALTSDGINAVAEAGALGAVR------RALTAWEK-----------SSLPRL-------T 290
Query: 307 SPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKI 366
+ L ++++Q YE ++ +WV A LG +A +
Sbjct: 291 WTDTDIGRLPDWYDAVVAVQGYEAWRLHGDWVSGAMTSLGDEPDRNFADASRIWESTYGR 350
Query: 367 LYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDR---TLVLSSIGSM 423
E + + D +L+ T S PP + T F + T +L+ + ++
Sbjct: 351 KLIKLGEASQTITAYVGDSLLLLPATSSTPPER--TSYPSGDRFRNTMRATGMLTCLATI 408
Query: 424 SGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDS 465
SG +P+ + P+ + + HG D+ +L V L S
Sbjct: 409 SGLPNATVPLRTDDGVPVGLCLVGPHGRDRDVLAVVAGLGGS 450
>gi|83943390|ref|ZP_00955849.1| amidase [Sulfitobacter sp. EE-36]
gi|83845622|gb|EAP83500.1| amidase [Sulfitobacter sp. EE-36]
Length = 401
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 127/405 (31%), Positives = 183/405 (45%), Gaps = 50/405 (12%)
Query: 66 PPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGK 125
P PL+GL A+KD+FDV+G VT GS ++D A + AV V L GA +G
Sbjct: 28 PVEGEGPLSGLNVAVKDLFDVRGQVTRAGSL-VRKDASPAIKDAVTVARLRGAGAGLVGH 86
Query: 126 TVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
+ EFA+ G N HYGTP+ P I GGS+SG A AVA + D ALGTDT G R+
Sbjct: 87 ANMTEFAYSGLGLNPHYGTPLTPLKEGCIAGGSTSGGASAVARGVADIALGTDTGGSARI 146
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRA 245
PA+FCG+ G++ + T+S G +P S SLD+VG+L R+ +L V +VL R
Sbjct: 147 PAAFCGLFGFKATAQTISREGAVPLSHSLDSVGVLTRDVGLLRPVLNVL---------RD 197
Query: 246 RRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQS 305
R L S P+ VI + G + + + +L+ LRA
Sbjct: 198 RPL-------PASSAPR----AVIVPENFGMDGLDT-------EVVDAFEAALEVLRASG 239
Query: 306 TSPENGTATL----KALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQ 361
S T +AL + E + + + + L V R+ A T
Sbjct: 240 VSVRRQTLDFFEDYRALP--VWQFSAVESRAHHGAYFDQTRAELDPRVASRMARADGVTG 297
Query: 362 DNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLK---LNTKKTYSAEFHDRTLVL- 417
R + A RL D + +P+V+ P K LN TY DR +L
Sbjct: 298 IEFARTIAAREALIARADRLFGDTPV-ALPSVAIMPPKPDDLNDDATY-----DRINLLA 351
Query: 418 ---SSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTV 459
+S+ ++ C V+IPI +HP + +T G +L T+
Sbjct: 352 LRNTSLANVIDGCSVSIPI---TDHPGTGLMLTAPAGRDAMLITM 393
>gi|340516027|gb|EGR46278.1| predicted protein [Trichoderma reesei QM6a]
Length = 718
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 111/177 (62%), Gaps = 3/177 (1%)
Query: 66 PPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGK 125
P + PL G+ FA+KD DVKG VT + R + A TA + LL GA +GK
Sbjct: 316 PDESMPPLFGIPFAVKDNIDVKGVVT---TAACDRFAYTATATAPAIQHLLDAGAIYVGK 372
Query: 126 TVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
LD+ A G+TG YG P + H GGSSSG AVAVAA LV FA+GTDT G VR+
Sbjct: 373 LNLDQLATGLTGCRSPYGIPHSYHSEKHASGGSSSGCAVAVAAGLVSFAIGTDTAGSVRI 432
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
PA+F GI+G++P+ GT+S GV+P QSLDT+G+ AR+ +V +V+ Q +A++P
Sbjct: 433 PAAFNGIVGFKPTKGTISARGVVPACQSLDTMGIFARSVEEARQVWYVMDQYDALDP 489
>gi|86360596|ref|YP_472484.1| hypothetical protein RHE_PE00322 [Rhizobium etli CFN 42]
gi|86284698|gb|ABC93757.1| probable glutamyl-tRNA amidotransferase subunit A protein
[Rhizobium etli CFN 42]
Length = 456
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 122/379 (32%), Positives = 181/379 (47%), Gaps = 49/379 (12%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A KD+FD++G T GS A A +V LL + G IG+T + EFA
Sbjct: 72 LDGIPIAWKDLFDIEGLPTTAGSVVLAA-TAPASCDAAIVGLLRRAGMVAIGRTNMSEFA 130
Query: 133 FGITGENKHYGTPVNPQ---MPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
F G N HYGTPVNP+ +P IPGGSSSG+ VAVAA LV A+GTDT G VR+PA+F
Sbjct: 131 FSGLGINPHYGTPVNPRGTDLP-RIPGGSSSGAGVAVAAGLVPVAMGTDTGGSVRIPAAF 189
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
GI+GY+ + G M GV P ++SLD++G L R+ +AV A R +
Sbjct: 190 NGIVGYKATSGRHVMDGVYPLAKSLDSLGPLCRSVR------------DAVWIDAAMRGL 237
Query: 250 FADDIFQ--LSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
A D+ + L + L +V+ A E +A+ +L+ R QS
Sbjct: 238 TAPDVIERPLRGLELLVPENVVFDAAEP-------------GVVAAFEAALE--RFQSAG 282
Query: 308 PENGTATLKALSSVMLSLQRY-------EFKTIYEEWVKSAKPRLGYNVFERVLEAINTT 360
+ A + ++ + RY F E R+ + V R TT
Sbjct: 283 ASVSRTIIPAFNEILDLMTRYGPLVTAEAFALHQERLAGPDAERMDHRVVMRTRLGSRTT 342
Query: 361 QDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSD-----PPLKLNTKKTYSAEFHDRTL 415
+ + + R + + RL+ D+IL PTV+ PL+ N + ++ ++RTL
Sbjct: 343 APDYIAILEARRRLIGGVDRLVG-DRILAFPTVAHVAPPIAPLEENDELFFAT--NNRTL 399
Query: 416 VLSSIGSMSGCCQVAIPIG 434
+++G+ C +IP G
Sbjct: 400 RNTALGNFLDWCGASIPCG 418
>gi|91976358|ref|YP_569017.1| amidase [Rhodopseudomonas palustris BisB5]
gi|91682814|gb|ABE39116.1| Amidase [Rhodopseudomonas palustris BisB5]
Length = 463
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 127/412 (30%), Positives = 188/412 (45%), Gaps = 51/412 (12%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA P AG+ +IKD+FD+KG VT GS D+ AE A V L + G IG+T
Sbjct: 80 AAPSPFAGIPISIKDLFDIKGQVTRAGSRALD-DNPPAEADAPAVARLRRAGFVVIGRTN 138
Query: 128 LDEFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
+ EFA+ G N HYGTP + H+PGGSSSG+AV+VA + LGTDT G R+
Sbjct: 139 MTEFAYSGIGINPHYGTPKAAFNRDAGHVPGGSSSGAAVSVADGMAHAGLGTDTGGSCRI 198
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAV--EPR 243
PA+F GI+GY+PS V G +P S SLD++G LAR+ + VL V PR
Sbjct: 199 PAAFNGIVGYKPSQHRVPRDGAVPLSFSLDSIGPLARSVDCCAVLDAVLADAPIVPLAPR 258
Query: 244 RARRLIFA----------DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIAS 293
+ L A DD ++ LKT+ IE + + PE ++V +A
Sbjct: 259 SLKGLRLAVPTTVALDELDDAVSVAFERALKTLSGHGAIIEKI---ELPEFLDVAPMMA- 314
Query: 294 NVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERV 353
KG A + S + RY + + PR V ER+
Sbjct: 315 -----KGGFAAAES---------------YAWHRYLIVAQGDVY----DPR----VRERI 346
Query: 354 LEA-INTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHD 412
L + D + ++ ++ + A RL D LV+PT ++ P K+ A
Sbjct: 347 LRGETQSAADYVDLITARKSLIARACARLAPYDA-LVMPTTANTPPKIADLADDKAFTKA 405
Query: 413 RTLVL--SSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDL 462
L L ++ +M C +++P + E P+ + +G D+ + + L
Sbjct: 406 NLLALRNCTLINMIDGCAISLPCHRDGEAPVGLMLAGVNGADREIFEIAASL 457
>gi|398827651|ref|ZP_10585859.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Phyllobacterium sp. YR531]
gi|398219365|gb|EJN05848.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Phyllobacterium sp. YR531]
Length = 371
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 177/386 (45%), Gaps = 48/386 (12%)
Query: 75 GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFG 134
GL+ AIKD D+ G T G A AVVV L+L G +GKTV E AFG
Sbjct: 15 GLRVAIKDTIDIAGLPTRAGCRALD-STPAAAANAVVVDLILDAGCRIVGKTVPHELAFG 73
Query: 135 ITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILG 194
+TG N GTP NP+ P IPGGSSSGSAVAVA D A+GTDT G +R+PA+ C + G
Sbjct: 74 VTGINDWAGTPQNPKFPDLIPGGSSSGSAVAVAEGSADVAIGTDTGGSIRIPAACCSVWG 133
Query: 195 YRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDI 254
+P+ G VS GV+P +LD VG AR+ +G ++ + + P + +
Sbjct: 134 LKPTFGRVSRKGVMPERTTLDCVGPFARS------LGGIVQAMEIIAPDFVPTAVDGAKV 187
Query: 255 FQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTAT 314
+S + + H + K I + SG++ + AS P TA
Sbjct: 188 AMISGLANWEIDHQMDKTI-ARSGFET--------FKAS----------LELMPVAFTAG 228
Query: 315 LKALSSVMLSLQRYEFKTIYEEWVK----SAKPRLGYNVFERVLEAINTTQDNIKILYKV 370
L ++S E W A +G +V +R++ A + KV
Sbjct: 229 LSLINS--------------ETWAAVGHLVATGLVGTDVADRLIAASQVDASELNDAEKV 274
Query: 371 RNEMRAALQRLLKDDKILVIPTVSD-PPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
R + + LL + ++++PT+ PP L + SA R L ++SG +
Sbjct: 275 RRQFTEEVDALLNEVDVIILPTLPVFPPTVLEGRNNRSAVELTR---LVRPFNLSGHPVL 331
Query: 430 AIPIGKYNEHPISISFITYHGGDKFL 455
A+P+G P+S+ + G D+ +
Sbjct: 332 AMPLGPLEAGPVSLQIVGRKGEDELV 357
>gi|398794521|ref|ZP_10554568.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pantoea sp. YR343]
gi|398208526|gb|EJM95247.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pantoea sp. YR343]
Length = 447
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 190/394 (48%), Gaps = 32/394 (8%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R + GL +IKD+FDV G VT GS + A A +V L +GA +GKT +
Sbjct: 65 RSAIDGLPISIKDLFDVAGEVTTAGS-RLLSNASVATANASIVDRLQLSGAAIVGKTNMS 123
Query: 130 EFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
EFAF G N HYGTP NP + IPGGSSSG+AVAV+ + A+GTDT G VR+PA
Sbjct: 124 EFAFTGLGVNPHYGTPANPWQRAQQRIPGGSSSGAAVAVSDGMCLAAVGTDTGGSVRIPA 183
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
+ CG+ G++PS + G LP + SLD++G++A + R +L + A +P
Sbjct: 184 ALCGLTGFKPSASRIDQRGTLPLAASLDSIGVIAHDV----RSCWLLDSVIAAQP----- 234
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
D LS+ H + L+G EH++ A +V +G++ +
Sbjct: 235 --LEIDERNLSEA------HFVIPQTRVLAGLD--EHVSAAWLHALDVLRAQGVKI-TEL 283
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
P A L +++ + +E ++++ +S V R+ +++ L
Sbjct: 284 PLQELAELDTINA-RGGITAWEAWQWHQQYAQSQSEAYDPQVLTRIQRGSLLNEEDAAEL 342
Query: 368 YKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYS--AEFHDRTLVL---SSIGS 422
Y++R + + +++ + +++PTV PL T A + L++ +S+ +
Sbjct: 343 YQLRADWKQRVEQAVAPFDGILMPTV---PLIAPTLAELEDPARYMQVNLLMLRNTSVIN 399
Query: 423 MSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
M C +++P + P+ + + HG D LL
Sbjct: 400 MLDGCSISLPCHQPGAAPVGLMLSSTHGNDAALL 433
>gi|424891426|ref|ZP_18315009.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WSM2297]
gi|393185421|gb|EJC85457.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WSM2297]
Length = 456
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 123/404 (30%), Positives = 189/404 (46%), Gaps = 46/404 (11%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A KD+FD++G T GS A A VV LL + G +G+T + EFA
Sbjct: 72 LDGIPIAWKDLFDIEGLPTTAGSVVLA-GEAPARHDAAVVGLLRQAGMIAVGRTNMSEFA 130
Query: 133 FGITGENKHYGTPVNPQ---MPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
F G N HYGTPVNP+ +P IPGGSSSG+ VAVAA LV A+GTDT G VR+PA+F
Sbjct: 131 FSGLGINPHYGTPVNPRGADLP-RIPGGSSSGAGVAVAAGLVPVAMGTDTGGSVRIPAAF 189
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
GI+GY+ + G +M GV P ++SLD++G L R+ +AV A R +
Sbjct: 190 NGIVGYKATRGRHAMEGVYPLAKSLDSLGPLCRSVR------------DAVWIDAAMRGL 237
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
A D+ + + +H + + + E IA+ +L+ R Q
Sbjct: 238 TAPDVVE-------RPLHGLELLVPENIVFDGAEP----GVIAAFETALE--RLQRAGAR 284
Query: 310 NGTATLKALSSVMLSLQRY-------EFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQD 362
+ A + + RY F + S R+ + V R TT
Sbjct: 285 VSRTVIPAFGEIFDLMTRYGPLVTAEAFALHRDRLAGSNADRMDHRVVMRTRLGAKTTLA 344
Query: 363 NIKILYKVRNEMRAALQRLLKDDKILVIPTVSD-----PPLKLNTKKTYSAEFHDRTLVL 417
+ + + R + ++RL+ D+++ PTV+ PL+ N ++ +++TL
Sbjct: 345 DYLAILEARGRLIDEVERLVG-DRLIAFPTVAHVAPPIAPLEQNDDLFFAT--NNKTLRN 401
Query: 418 SSIGSMSGCCQVAIPIGKYNE-HPISISFITYHGGDKFLLDTVL 460
+++G+ C V+IP G P+ + D+ LL T L
Sbjct: 402 TALGNFLDWCGVSIPCGTGEAGMPVGLLLSATAHRDEALLGTAL 445
>gi|302832303|ref|XP_002947716.1| hypothetical protein VOLCADRAFT_116484 [Volvox carteri f.
nagariensis]
gi|300267064|gb|EFJ51249.1| hypothetical protein VOLCADRAFT_116484 [Volvox carteri f.
nagariensis]
Length = 308
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 148/311 (47%), Gaps = 19/311 (6%)
Query: 162 SAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLA 221
S VAVA VD LGTDT G +RVPASFCG+LG RP+ G V+ G + S T G A
Sbjct: 16 SHVAVACGDVDIGLGTDTGGSIRVPASFCGLLGIRPTWGRVARCGTTALAPSFTTPGWFA 75
Query: 222 RNASILHRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQN 281
R+ ++L VG VLL ++ R R + A D F L+ P K I+ ++LS Q
Sbjct: 76 RDPAVLRAVGAVLLDPSSRGSSRLGRWLVAKDAFALADPPTGKAIY------DTLSA-QF 128
Query: 282 PEHMN-VGQYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKS 340
P+ + +GQ L + +P +G L M + +E + WV +
Sbjct: 129 PKVVQLLGQP----------LEVEVAAPLSGEG-LGTFVDWMGVFRGFEVWQEHAAWVSA 177
Query: 341 AKPRLGYNVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKL 400
P G + ER A T++ ++ R +R+ L LL D +LV+PT P +
Sbjct: 178 HNPEFGPGIKERFAMAAAVTKEQHEVGSAKRRRIRSHLLELLGSDGLLVVPTTPGPAPPV 237
Query: 401 NTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVL 460
NT + R + L+SI ++G QV++PI + + P+ + I G D+ LL+
Sbjct: 238 NTPPADLDAWRTRLISLTSIAGLAGLPQVSLPIARVDGLPVGLGLIGPPGSDEALLEITE 297
Query: 461 DLYDSLQEQVN 471
L + + +
Sbjct: 298 HLMGVIAQPLQ 308
>gi|335036808|ref|ZP_08530127.1| hypothetical protein AGRO_4135 [Agrobacterium sp. ATCC 31749]
gi|333791789|gb|EGL63167.1| hypothetical protein AGRO_4135 [Agrobacterium sp. ATCC 31749]
Length = 453
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 124/396 (31%), Positives = 183/396 (46%), Gaps = 29/396 (7%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A KD+FD++G T GS D A R A VV L + G IG+T + EFA
Sbjct: 70 LDGIPVAWKDLFDLEGMPTTAGSKILS-DDAPASRDADVVAALKQAGMVSIGRTNMSEFA 128
Query: 133 FGITGENKHYGTPVNP-QMPSH-IPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
F G N HYGTP NP H +PGGSSSG+ V VAA LV A+GTDT G VR+PA+F
Sbjct: 129 FSGLGINPHYGTPRNPVSTDGHRLPGGSSSGAGVVVAAGLVPVAIGTDTGGSVRIPAAFN 188
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIF 250
G++GY+ S G SM GV P ++SLD++G L L +AV A R
Sbjct: 189 GVVGYKASRGRYSMHGVYPLAKSLDSLGPL------------TLTVQDAVWVDAAMRGRT 236
Query: 251 ADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPEN 310
A D L+++P L + ++ G + Q + V + +R Q+ +
Sbjct: 237 AAD---LARMP-LSGVSLVVPETVVFDGIEPGVAAAFEQAVERLVRAGASVRRQAFPVFS 292
Query: 311 GTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKV 370
L +++ + + E +A R+ V R N + + + +
Sbjct: 293 ELFDLIREKGALVTAEAFSLHKARLEGADAA--RMDPRVVVRTRLGANISMPDYIAIIEA 350
Query: 371 RNEMRAALQRLLKDDKILVIPTVSD-----PPLKLNTKKTYSAEFHDRTLVLSSIGSMSG 425
R+ M AA ++ D+IL+ PT+ PL N ++ + +TL + IG+
Sbjct: 351 RDRMTAAFSAMIGRDEILISPTLPHVAAKVAPLVENDDAFFA--MNAKTLRNTQIGNFLD 408
Query: 426 CCQVAIPIGKYNE-HPISISFITYHGGDKFLLDTVL 460
C V+IP G P+ + HG D LL +
Sbjct: 409 HCGVSIPCGTGEAGMPVGLLLSGLHGTDDRLLGVAM 444
>gi|134293034|ref|YP_001116770.1| amidase [Burkholderia vietnamiensis G4]
gi|161521291|ref|YP_001584718.1| amidase [Burkholderia multivorans ATCC 17616]
gi|189352537|ref|YP_001948164.1| amidase [Burkholderia multivorans ATCC 17616]
gi|134136191|gb|ABO57305.1| Amidase [Burkholderia vietnamiensis G4]
gi|160345341|gb|ABX18426.1| Amidase [Burkholderia multivorans ATCC 17616]
gi|189336559|dbj|BAG45628.1| amidase [Burkholderia multivorans ATCC 17616]
Length = 457
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 124/393 (31%), Positives = 185/393 (47%), Gaps = 38/393 (9%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAGL ++KD+FDV+G VT GS R A A V L + GA +G+T + EFA
Sbjct: 69 LAGLPVSVKDLFDVEGSVTAAGSA-LLRSAPPANGDAAAVQRLREAGAIIVGRTNMSEFA 127
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+ G N HYGTP NP I GGSSSG+AVAVA L +L TDT G +R+PA+ CGI
Sbjct: 128 YSGLGVNPHYGTPTNPVGAGRIAGGSSSGAAVAVARGLCAASLATDTGGSIRIPAALCGI 187
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA---SILHRVGHVLLQLNAVEPRRAR-RL 248
G++P+ VS GVLP S+SLD+VG +A A SI+H+V L EP + RL
Sbjct: 188 AGFKPTAQAVSRDGVLPLSRSLDSVGPIASTAECCSIVHQV------LTGGEPDTSTLRL 241
Query: 249 IFADDIFQLSKVPK--LKTIH-VISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQS 305
D +L+ V L + ++S+A + +V + +A P L +RA
Sbjct: 242 ----DTLRLAVVTDYLLDELDPMVSRAFDRALALLTAAGASV-ETVA--FPELNAIRAGG 294
Query: 306 TSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIK 365
+ + +++ + + F + W+ S V R+L + +
Sbjct: 295 YNAK------------IVAAEAFAF---HRSWLASHAHLYDPRVHTRLLAGKDLPAADYL 339
Query: 366 ILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLS--SIGSM 423
R E+ A +R L ++PTV+ K+ +A F +L S+ ++
Sbjct: 340 DALDARAELINAARRRLAAFDAWLMPTVAIVAPKIGDLDDDNAFFRANAAMLRNPSVVNL 399
Query: 424 SGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
C + +PI N P +S G D +L
Sbjct: 400 LDGCALTLPIPSDNPLPQGLSVCGLGGADADVL 432
>gi|378729632|gb|EHY56091.1| glutamyl-tRNA (Gln) amidotransferase [Exophiala dermatitidis
NIH/UT8656]
Length = 632
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 132/466 (28%), Positives = 201/466 (43%), Gaps = 54/466 (11%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
+PLAGL+FA+KD VKG TG+G+ W+ H ++TA + LLL+ GA +GK E
Sbjct: 173 RPLAGLRFAVKDTISVKGTRTGYGNQAWREIHDPEKKTAPCIKLLLQAGAVLVGKLKTTE 232
Query: 131 FAFGIT-GENKHYGTPVNPQMPS-HIPGGSSSGSAVAVAA-QLVDFALGTDTIGCVRVPA 187
FA G+ E P NP+ P SS+GSAVA AA +DF +GTDT G +R PA
Sbjct: 233 FAEGLDPNEWIDDDCPYNPRGDGRQKPSSSSTGSAVAAAAYDWIDFTVGTDTGGSIRHPA 292
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLL------------ 235
G+ G RPSHG +S+ GVL + +T+G+ AR+ASI RVG L+
Sbjct: 293 GVNGVYGQRPSHGLISLEGVLGATDLFNTIGIFARHASIFARVGAHLVHPTRTAFCTPIE 352
Query: 236 -QLNAVEPRRA-------------RRLIFADDIFQLSKVPKLKTIHVISKAIE-SLSGYQ 280
+ N + P RA RL S K I + + +E +L +
Sbjct: 353 PKYNLLYPTRAAQAADMNPTPSVQHRLFPHPSADVSSWTEAEKQIEAVMRKLEITLDCER 412
Query: 281 NPEHMNVGQYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKS 340
P ++N + P + R+ + + +T+ S+V L +F Y
Sbjct: 413 IPFNLN---ELWEATPPIGQPRSLDQAAGHIYSTITTASAVHGCLD--DFIHDYSAKNDG 467
Query: 341 AKPRLGYNVFERVLEAINTTQDNIKILYKVRNEMRAALQRLL------KDDKILVIPTVS 394
PR+ V R+ + + + I K R + + +L+ P
Sbjct: 468 RPPRISELVSRRLEHGRSASAERISDALKAMQSFRTWTESTIFGSYDQNATTLLIFPQCY 527
Query: 395 DPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKY----------NEHPISIS 444
P + + AE + T + S G + GC IP+ + P+SIS
Sbjct: 528 GRP-DYRHETSDRAELFNDTFSIYSFGYLVGCPDYTIPVAEVPYLSAVTNTIEYLPVSIS 586
Query: 445 FITYHGGDKFLLDTVLDLYDS-LQEQVNIASNLVP-LPDTNGSIDA 488
I G D L + + L+ + + V L P + + NGS D+
Sbjct: 587 LIGPPGSDLELFNVIASLHKAGVILDVAAGKQLFPHVGNNNGSFDS 632
>gi|159185658|ref|NP_357361.2| hypothetical protein Atu3243 [Agrobacterium fabrum str. C58]
gi|159140792|gb|AAK90146.2| glutamyl-tRNA amidotransferase subunit A [Agrobacterium fabrum str.
C58]
Length = 453
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 123/396 (31%), Positives = 183/396 (46%), Gaps = 29/396 (7%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A KD+FD++G T GS D A R A VV L + G IG+T + EFA
Sbjct: 70 LDGIPVAWKDLFDLEGMPTTAGSKVLS-DDAPASRDADVVAALKQAGMVSIGRTNMSEFA 128
Query: 133 FGITGENKHYGTPVNP-QMPSH-IPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
F G N HYGTP NP H +PGGSSSG+ V VAA LV A+GTDT G VR+PA+F
Sbjct: 129 FSGLGINPHYGTPRNPVSTDGHRLPGGSSSGAGVVVAAGLVPVAIGTDTGGSVRIPAAFN 188
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIF 250
G++GY+ S G SM GV P ++SLD++G L R +AV A R
Sbjct: 189 GVVGYKASRGRYSMHGVYPLAKSLDSLGPLTRTVQ------------DAVWVDAAMRGRT 236
Query: 251 ADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPEN 310
A D L+++P L + ++ G + Q + V + +R Q+ +
Sbjct: 237 AAD---LARMP-LSGVSLVVPETVVFDGIEPGVAAAFEQAVERLVRAGASVRRQAFPVFS 292
Query: 311 GTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKV 370
L +++ + + E +A R+ V R N + + + +
Sbjct: 293 ELFDLIREKGALVTAEAFSLHKARLEGADAA--RMDPRVVVRTRLGANISMPDYIAIIEA 350
Query: 371 RNEMRAALQRLLKDDKILVIPTVSD-----PPLKLNTKKTYSAEFHDRTLVLSSIGSMSG 425
R+ M AA ++ D+IL+ PT+ PL N ++ + +TL + IG+
Sbjct: 351 RDRMMAAFSAMISRDEILISPTLPHVAAKVAPLVENDDAFFA--MNAKTLRNTQIGNFLD 408
Query: 426 CCQVAIPIGKYNE-HPISISFITYHGGDKFLLDTVL 460
C V+IP G P+ + +G D LL +
Sbjct: 409 HCGVSIPCGTGEAGMPVGLLLSGLYGTDDRLLGVAM 444
>gi|15806394|ref|NP_295100.1| amidase [Deinococcus radiodurans R1]
gi|6459130|gb|AAF10946.1|AE001983_7 amidase, putative [Deinococcus radiodurans R1]
Length = 394
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 186/387 (48%), Gaps = 44/387 (11%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAGL F++KD++ V G+ + R +V+V LL+ GA +GKT L E
Sbjct: 34 PLAGLTFSVKDLYGVPGWPLTAST----RAPVPDPGASVLVGRLLELGAAALGKTHLHEV 89
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A GITG N + GT +P+ P +PGGSSSG+AV+VA VDFALGTDT G +RVPA++C
Sbjct: 90 ALGITGMNGYGGT-THPRDPERVPGGSSSGAAVSVALGQVDFALGTDTGGSIRVPAAWCS 148
Query: 192 ILGYRPS--HGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
++GY+P+ H S GVLP S + D G LAR+ S++ RV + L V P+ +
Sbjct: 149 VVGYKPTKGHPAWSTEGVLPLSWTCDHAGPLARDLSMVVRV-YQALGGGHVTPQDWQ--- 204
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
D+ +P+ T + A+ + Y + LK R + +P
Sbjct: 205 ---DVRVGLWLPEGWTDETVRDAVLA---YAD---------------DLKA-RGATVTPV 242
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
+ L A S ++LS E ++ E ++ P + +++ ++ ++
Sbjct: 243 DLPEMLDAYSPIVLS----EAARVHAEALQQPDPGFLPFTLMSLRNGAALSEEEVQAAHE 298
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAE----FHDRTLVLSSIGSMSG 425
R E R L RLL + +L+ P V PP + + E L L++ S+ G
Sbjct: 299 RRTEYRVLLDRLLAEFDVLLAPAVPTPPPLIGQDEVTLLEGPQVLRRAVLRLNTPFSLLG 358
Query: 426 CCQVAIPIGKYNEHPISISFITYHGGD 452
+++P + + + + HG D
Sbjct: 359 APVLSLPSSVPD---VGVQLVGRHGQD 382
>gi|338730589|ref|YP_004659981.1| amidase [Thermotoga thermarum DSM 5069]
gi|335364940|gb|AEH50885.1| Amidase [Thermotoga thermarum DSM 5069]
Length = 452
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 188/382 (49%), Gaps = 28/382 (7%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
+QPL G+ A+KD+ DVKG T GS +K + A+ A VV LL K GA +GKT L
Sbjct: 73 KQPLLGIPIAVKDLIDVKGVPTTAGSLFFKENI--AKEDAFVVKLLRKAGAIIVGKTNLH 130
Query: 130 EFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
E A G+T N H+G NP S I GGSS GSAVAVA + ALGTDT G +R+PA+
Sbjct: 131 EIALGVTNNNPHFGPCRNPYDKSKISGGSSGGSAVAVATGMALAALGTDTGGSIRIPAAL 190
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
CG++G +P++G VS GV+P + LD VG + + H + + + + P R
Sbjct: 191 CGVVGLKPTYGVVSTSGVIPLAWHLDHVGPITSSVEDAHLIFRITRKYDRNNPYSVTR-- 248
Query: 250 FADDIFQLSK-VPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSL-KGLRAQSTS 307
++++ + + +L+ + + IE Q I V + K L S
Sbjct: 249 ----VYKVKRNLSRLRVAVAVGEYIEE-----------ADQRILELVRDIAKSLEKMGFS 293
Query: 308 PENGTAT-LKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKI 366
E LK L++ + + + E T ++E + G +V ER+++ +NT+ + +
Sbjct: 294 VEQKKLDWLKDLAAANVLMTQVEAATFHKERLLKNPEMFGSDVRERLMQGLNTSGTDYAL 353
Query: 367 LYKVRNEMRAALQRLLKDDKILVIPT--VSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMS 424
K + E + + K+ ++++PT ++ PP++ + + T ++S
Sbjct: 354 ARKTQTEAKHIFREFFKEYDLILLPTTPITAPPIEGENAVAMARKLTRFTAPF----NIS 409
Query: 425 GCCQVAIPIGKYNEHPISISFI 446
G + +P+G + P + +
Sbjct: 410 GLPALTVPVGFVDGLPAGVQLV 431
>gi|399909744|ref|ZP_10778296.1| amidase [Halomonas sp. KM-1]
Length = 390
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/379 (30%), Positives = 178/379 (46%), Gaps = 43/379 (11%)
Query: 77 KFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGIT 136
+ +KD D+ GY T GS ER A +V L G +GK L E AFG+T
Sbjct: 16 RVVVKDSIDIAGYPTRAGSAALA-GVPAVERHAEIVERTLAAGYRIVGKANLHELAFGMT 74
Query: 137 GENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYR 196
G N GTP NP+ P+ IPGGSSSGSA AVAA L + +GTDT G +RVPA+ CG+ G +
Sbjct: 75 GLNAWTGTPENPRFPALIPGGSSSGSATAVAAGLAEIGIGTDTGGSIRVPAACCGVYGLK 134
Query: 197 PSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIFQ 256
P+ G + GV+P SLD VG L+ + + ++ + AV+ A + +
Sbjct: 135 PTFGRLGRRGVMPAHSSLDCVGPLSAD------LDELIAFMTAVDAGFA--------VGE 180
Query: 257 LSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTATLK 316
+ +P L + V + + + E VG +A L + +
Sbjct: 181 GAAMPSLCWLEVSADS----AILAAVEACLVGAGLAGKKSVLPLMD-------------E 223
Query: 317 ALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNEMRA 376
A + M + R + W+ S RLG +V R+ A TT ++ VR A
Sbjct: 224 AYQAAMALINRETYAAC-AAWLDSG--RLGCDVERRLRAAAETTDAELREAEAVRLAFTA 280
Query: 377 ALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIG---SMSGCCQVAIPI 433
++ RLL+ ++L +PT+ PL +AE + L +SS+ ++SG +++P+
Sbjct: 281 SVDRLLETYEVLALPTLPHFPL-----TRVAAEEGRQDLSVSSLVRPFNLSGHPALSLPL 335
Query: 434 GKYNEHPISISFITYHGGD 452
P+S+ I G D
Sbjct: 336 PPSRGRPVSLQLIGRRGDD 354
>gi|386361298|ref|YP_006059543.1| amidase [Thermus thermophilus JL-18]
gi|383510325|gb|AFH39757.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Thermus thermophilus JL-18]
Length = 434
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 174/393 (44%), Gaps = 37/393 (9%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R PL GL +KD+F VKG T G+ K A V L + GA KT +D
Sbjct: 62 RGPLHGLPLTVKDLFPVKGMPTRAGT---KAPLPPLPEEARAVRRLREAGALLFAKTNMD 118
Query: 130 EFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
E A GITGEN G N PS GGSS GSAVAVA + +LGTDT G +R+PA F
Sbjct: 119 EIALGITGENPWTGPVRNAVDPSRQAGGSSGGSAVAVALGIGLASLGTDTGGSIRIPAGF 178
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
G++G++PS+G VS+ G LP S+S D G L R+ H
Sbjct: 179 NGVVGFKPSYGRVSLEGALPLSRSTDHAGPLTRSVRDAH--------------------- 217
Query: 250 FADDIFQLSKVPKLKTIH--VISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
F +I +P L+ + V ++ L G E + ++P+L+ + +
Sbjct: 218 FLTEILAGESIP-LEAVQNPVFGVPLDFLEGRLGVEVRKAFTRLLEDLPALRAEVREVSL 276
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
P L+ + V L RYE I+E+ +K V E +L + T+ + +
Sbjct: 277 P------LEGVYEVYTRLVRYEAARIHEKALKEHPEGFSPQVREALLAGLALTEKDYRDA 330
Query: 368 YKVRNEMRAALQRLLKDDKILVIPT--VSDPPLKLNTKKTYSAEFHDRT--LVLSSIGSM 423
R +R L + L+ L++P + PPL + S R + L+ S+
Sbjct: 331 VAEREVLRLELAKALRGVDALLLPVQPLPAPPLGTEEVELESGRKGHREAFITLTLPFSL 390
Query: 424 SGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
G +A+P K P+ + + +G D +L
Sbjct: 391 LGVPTLALPFAKVEGMPVGLQVVGAYGEDGKVL 423
>gi|268318045|ref|YP_003291764.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Rhodothermus marinus
DSM 4252]
gi|262335579|gb|ACY49376.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Rhodothermus
marinus DSM 4252]
Length = 491
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 206/481 (42%), Gaps = 65/481 (13%)
Query: 9 KTNTSNPKVWVVIGVSVVGFVVLAETLRRRRNPKLNGRVDFGAFLERFELIPFPQPPPPA 68
+ NP++ I V G + A L R L R E +P
Sbjct: 30 RIEAENPRLNAFISVDPEGALAQARALDER--------------LARGEPLP-------- 67
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
PL GL A+KDV +K GS ++ + A V+T L + GA IGKT
Sbjct: 68 ---PLGGLVLAVKDVICIKDQRVTCGS--RMLENFVSLYDATVITRLREAGAIFIGKTNC 122
Query: 129 DEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPAS 188
DEFA G + E ++G NP P ++PGGSS GSAVAVAA++ ALG+DT G +R PA+
Sbjct: 123 DEFAMGSSNETSYFGPARNPINPDYVPGGSSGGSAVAVAARMCQAALGSDTGGSIRQPAA 182
Query: 189 FCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRL 248
FCGI+G +P++G VS G++ + S DT+G + R+ V+ ++ + A
Sbjct: 183 FCGIVGLKPTYGRVSRYGLVAYASSFDTIGPMTHTVEDAARILQVIAGVDRWDSTSAP-- 240
Query: 249 IFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSP 308
+ D + K P +K + I E + +PE V + A+ + + + + + P
Sbjct: 241 VEVPDYLEALKQP-IKGLR-IGLPREYFTEGLDPEFRQVLEERAAQLEAAGAVVQEVSLP 298
Query: 309 --ENGTATLKALSSVMLS--LQRYEF-----------------------KTIYEEWVKSA 341
E G AT L++ S L RY+ IY +V+S
Sbjct: 299 HTEYGIATYYILATAEASSNLARYDGIRYGYRADVQQIRRELAESDSDDSVIYRLYVRSR 358
Query: 342 KPRLGYNVFERVLEAINTTQDNIKILY-----KVRNEMRAALQRLLKDDKILVIPTVSDP 396
G V R++ Y +VR +R R + +L+ P P
Sbjct: 359 SEGFGTEVKRRIMLGTYVLSAGYYEAYYAKAQRVRRLIRQDFDRAFEQVDVLLTPASPTP 418
Query: 397 PLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNE-HPISISFITYHGGDKFL 455
P L +K + E + + V + +++G + +P+G ++ P+ + H + L
Sbjct: 419 PFPLGSKLSDPLEMY-LSDVYTVTANLAGIPGLVVPVGTHSSGFPVGAQLLGRHFDEATL 477
Query: 456 L 456
L
Sbjct: 478 L 478
>gi|445443617|ref|ZP_21442642.1| amidase [Acinetobacter baumannii WC-A-92]
gi|444762562|gb|ELW86923.1| amidase [Acinetobacter baumannii WC-A-92]
Length = 369
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 122/398 (30%), Positives = 190/398 (47%), Gaps = 49/398 (12%)
Query: 76 LKFAIKDVFDVKGYVTGFGSP---DWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LK +KD D++G T GS + + H +AE VV +LK IGKT L E A
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSKALLEVEPAHDDAE----VVKNILKADCEIIGKTNLHELA 70
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
FGITG N +GTP+NP+ P IPGGSSSGSA AVAA+ DF LGTDT G +R+PA+ CG+
Sbjct: 71 FGITGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGV 130
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G +P+ G VS GV P S SLD VG A + ++ + ++ D
Sbjct: 131 YGLKPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKAMQII-----------------D 173
Query: 253 DIF---QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
F + ++ PKL + V + + YQ + N+ +
Sbjct: 174 PTFKPAECTRTPKLAVLDVKADEVVWNCIYQALQKANLETVLEK---------------- 217
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
+A + + YE + E ++ +G +V R+L+A +TT + +K
Sbjct: 218 --VEHFEAAYDAGMQIINYENWQAFGELTQTG--LIGSDVNNRLLKAAHTTLEQVKQAEV 273
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
V+ ++ L LL+ LV+PT+ PLK++ + A + LV ++SG +
Sbjct: 274 VKAQLTQELDALLEKYDALVLPTLPQIPLKVSEAENTVAFLNLTGLVRPF--NLSGHPAI 331
Query: 430 AIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
++P+ P+ + F++ H D+ L D++Q
Sbjct: 332 SVPLETSEGLPVGLQFVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|419961071|ref|ZP_14477080.1| amidase [Rhodococcus opacus M213]
gi|414573392|gb|EKT84076.1| amidase [Rhodococcus opacus M213]
Length = 454
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 182/408 (44%), Gaps = 43/408 (10%)
Query: 67 PAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKT 126
P PLAG + A+ D++ V G G GS + TA VV LL GA +G
Sbjct: 77 PTGDGPLAGKRLAVTDLYAVAGQQIGAGSGRRLAEAPVETGTAAVVARLLGQGARVVGLA 136
Query: 127 VLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
D+ +G +G N+ +GTP NP+ +PGG++SG+A AVA D LG DT G VR+P
Sbjct: 137 QTDDLGYGHSGINQQFGTPPNPRAEDCLPGGATSGAASAVAQGSADIGLGVDTTGSVRIP 196
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRAR 246
AS+ G+ G+ PS G VS G+ P S + DT + + L V LL L A P R+
Sbjct: 197 ASYQGLYGFAPSRGAVSTDGLFPLSPTFDTPAWVCGDLDTLVAVSGALLPLTAETPFRS- 255
Query: 247 RLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQST 306
+ +D I +++ L + +L+ ++ S++P L T
Sbjct: 256 -ALTSDGINAVAEAGALGAVR------RALTAWEK-----------SSLPRL-------T 290
Query: 307 SPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLG------YNVFERVLEAINTT 360
+ L ++++Q YE ++ +WV A LG + R+ E+
Sbjct: 291 WTDTDIGRLPDWYDAVVAVQGYEAWRLHGDWVSGAMTSLGDEPGRNFAAASRIWESTYG- 349
Query: 361 QDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDR---TLVL 417
+ L K+ E + + D +L+ T S P + T F + T +L
Sbjct: 350 ----RKLIKL-AEASQTITAYVGDSLLLLPATSSTAPER--TSYPSGDRFRNTMRATGML 402
Query: 418 SSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDS 465
+ + S+SG +P+ + P+ + + HG D+ +L V L D+
Sbjct: 403 TCLASISGLPNATVPLRTDDGVPVGLCLVGPHGRDRDVLAVVASLGDT 450
>gi|410631137|ref|ZP_11341818.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Glaciecola arctica BSs20135]
gi|410149339|dbj|GAC18685.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Glaciecola arctica BSs20135]
Length = 373
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 175/387 (45%), Gaps = 47/387 (12%)
Query: 74 AGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAF 133
A L +KD DV G+VT GS A A VVT +L +G IGK + E AF
Sbjct: 14 ADLVAGVKDNIDVAGFVTQAGSESLCHTPI-ALSHADVVTTVLGSGVKLIGKLNMHELAF 72
Query: 134 GITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGIL 193
G+TG N++ GTP N P +I GGSSSG A AVA VDF++GTDT G +RVPA+ CG+
Sbjct: 73 GMTGVNEYLGTPTNYLFPDYITGGSSSGCATAVAQGKVDFSIGTDTGGSIRVPAACCGVF 132
Query: 194 GYRPSHGTVSMIGVLPNSQSLDTVGLLARNAS-ILHRVGHVLLQLNAVEP----RRARRL 248
G +P+ G +S GVLP SLD +G LA +A ++ + + + ++P + AR
Sbjct: 133 GLKPTFGRLSRRGVLPAESSLDCIGPLAFSADRLIDAMCSMDKTFSPIKPLANIKLARVS 192
Query: 249 IFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSP 308
+ A+ + Q+ LK E + V Q +++PS
Sbjct: 193 VNAESVIQMQVDNALKK-----------------EFLKVSQ---TDLPS----------- 221
Query: 309 ENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILY 368
A + L L +E Y V + K LG +V R+L A N +
Sbjct: 222 ------FTAAYDMALKLMNFEMWQAYGHLVGTGK--LGPDVENRLLGARNIDPSVVTEAE 273
Query: 369 KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQ 428
VR + L+ LV+PT++ PLK + H +L ++SG
Sbjct: 274 VVRKRFSQEVDSALRGVDALVLPTLAAFPLKRIEALAGQNDLHISSLTRPF--NLSGHPA 331
Query: 429 VAIPIGKYNEHPISISFITYHGGDKFL 455
+ IPI P+ + + G D+ +
Sbjct: 332 ITIPIRNNLGKPVGMQLVGAKGRDEVI 358
>gi|384100035|ref|ZP_10001102.1| amidase [Rhodococcus imtechensis RKJ300]
gi|383842413|gb|EID81680.1| amidase [Rhodococcus imtechensis RKJ300]
Length = 454
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 182/408 (44%), Gaps = 43/408 (10%)
Query: 67 PAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKT 126
P PLAG + A+ D++ V G G GS + TA VV LL GA +G
Sbjct: 77 PTGDGPLAGKRLAVTDLYAVAGQQIGAGSGRRLAEAPVETGTAAVVARLLGQGARVVGLA 136
Query: 127 VLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
D+ +G +G N+ +GTP NP+ +PGG++SG+A AVA D LG DT G VR+P
Sbjct: 137 QTDDLGYGHSGINQQFGTPPNPRAEDCLPGGATSGAASAVAQGSADIGLGVDTTGSVRIP 196
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRAR 246
AS+ G+ G+ PS G VS G+ P S + DT + + L V LL L A P R+
Sbjct: 197 ASYQGLYGFAPSRGAVSTDGLFPLSPTFDTPAWVCGDLDTLVAVSGALLPLTAETPFRS- 255
Query: 247 RLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQST 306
+ +D I +++ L + +L+ ++ S++P L T
Sbjct: 256 -ALTSDGINAVAEAGALGAVR------RALTAWEK-----------SSLPRL-------T 290
Query: 307 SPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLG------YNVFERVLEAINTT 360
+ L ++++Q YE ++ +WV A LG + R+ E+
Sbjct: 291 WTDTDIGRLPDWYDAVVAVQGYEAWRLHGDWVSGAMTSLGDEPGRNFAAASRIWESTYG- 349
Query: 361 QDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDR---TLVL 417
+ L K+ E + + D +L+ T S P + T F + T +L
Sbjct: 350 ----RKLIKL-AEASQTITAYVGDSLLLLPATSSTAPER--TSYPSGDRFRNTMRATGML 402
Query: 418 SSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDS 465
+ + S+SG +P+ + P+ + + HG D+ +L V L D+
Sbjct: 403 TCLASISGLPNATVPLRTDDGVPVGLCLVGPHGRDRDVLAVVASLGDT 450
>gi|432336008|ref|ZP_19587549.1| amidase [Rhodococcus wratislaviensis IFP 2016]
gi|430777076|gb|ELB92458.1| amidase [Rhodococcus wratislaviensis IFP 2016]
Length = 454
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 182/408 (44%), Gaps = 43/408 (10%)
Query: 67 PAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKT 126
P PLAG + A+ D++ V G G GS + TA VV LL GA +G
Sbjct: 77 PTGDGPLAGKRLAVTDLYAVAGQQIGAGSGRRLAEAPVETGTAAVVARLLGQGARVVGLA 136
Query: 127 VLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
D+ +G +G N+ +GTP NP+ +PGG++SG+A AVA D LG DT G VR+P
Sbjct: 137 QTDDLGYGHSGINQQFGTPPNPRAEDCLPGGATSGAASAVAQGSADIGLGVDTTGSVRIP 196
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRAR 246
AS+ G+ G+ PS G VS G+ P S + DT + + L V LL L A P R+
Sbjct: 197 ASYQGLYGFAPSRGAVSTDGLFPLSPTFDTPAWVCGDLDTLVAVSGALLPLTAETPFRS- 255
Query: 247 RLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQST 306
+ +D I +++ L + +L+ ++ S++P L T
Sbjct: 256 -ALTSDGINGVAEAGALGAVR------RALTAWEK-----------SSLPRL-------T 290
Query: 307 SPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLG------YNVFERVLEAINTT 360
+ L ++++Q YE ++ +WV A LG + R+ E+
Sbjct: 291 WTDTDIGRLPDWYDAVVAVQGYEAWRLHGDWVSGAMTSLGDEPGRNFAAASRIWESTYG- 349
Query: 361 QDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDR---TLVL 417
+ L K+ E + + D +L+ T S P + T F + T +L
Sbjct: 350 ----RKLIKL-AEASQTITAYVGDSLLLLPATSSTAPER--TSYPSGDRFRNTMRATGML 402
Query: 418 SSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDS 465
+ + S+SG +P+ + P+ + + HG D+ +L V L D+
Sbjct: 403 TCLASISGLPNATVPLRTDDGVPVGLCLVGPHGRDRDVLAVVASLGDT 450
>gi|300715728|ref|YP_003740531.1| amidase [Erwinia billingiae Eb661]
gi|299061564|emb|CAX58678.1| Amidase [Erwinia billingiae Eb661]
Length = 453
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 102/157 (64%), Gaps = 3/157 (1%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
A PL G+ +IKD+FD++G T GS D AE A +V LL+ GA +GKT +
Sbjct: 69 ALSPLDGVPVSIKDLFDLQGEATTGGSTVLA-DAPVAESHATIVDKLLQAGAVIVGKTNM 127
Query: 129 DEFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
EFA+ G N HYGTP NP + IPGGSSSG+AV+++ + A+G+DT G VR+P
Sbjct: 128 TEFAYSGLGINPHYGTPANPWDRAARRIPGGSSSGAAVSISDGMSLGAIGSDTGGSVRIP 187
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
A+FCG+ GY+P+ +SM GVLP S SLD+VG LA +
Sbjct: 188 AAFCGLTGYKPTARRISMAGVLPLSASLDSVGTLAHD 224
>gi|148254382|ref|YP_001238967.1| amidase [Bradyrhizobium sp. BTAi1]
gi|146406555|gb|ABQ35061.1| Putative Glu-tRNA amidotransferase [Bradyrhizobium sp. BTAi1]
Length = 450
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 121/404 (29%), Positives = 197/404 (48%), Gaps = 45/404 (11%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA P AG+ +IKD+FD+KG VT GS + D A+ A VV L + G IG+T
Sbjct: 67 AAPSPYAGIPVSIKDLFDIKGQVTRAGSRALE-DSAPADADAPVVARLRRAGFVVIGRTN 125
Query: 128 LDEFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
+ EFA+ G N HYGTP + + H+PGGSSSG+AV+V ++ ALGTDT G R+
Sbjct: 126 MTEFAYSGIGINPHYGTPKSAWKREIGHVPGGSSSGAAVSVVDRMAYGALGTDTGGSCRI 185
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ--LNAVEPR 243
PA+F GI G++P+ V + G +P S +LD+ G LA + + VL + + PR
Sbjct: 186 PAAFNGITGFKPTQARVPLDGGVPLSTTLDSFGPLANTVACCAVLDSVLADEPIRPLAPR 245
Query: 244 RARRLIFADDIFQLSKVPKLKTIHVISKAIESLSG-------YQNPEHMNVGQYIASNVP 296
+ L A + ++ +A+E+L+ + PE ++VG
Sbjct: 246 PVKGLRLAVPTTVVLDELDVEVAETFERALETLAKQGALIERIEFPEFLDVG-------- 297
Query: 297 SLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEA 356
L G++ + E+ A +L+ + +Y+ PR+ + EA
Sbjct: 298 -LIGMKGGFAAAES-----YAWHRFLLTAK----GDVYD-------PRVSVRIMRG--EA 338
Query: 357 INTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLK---LNTKKTYSAEFHDR 413
I T D I++L R+ + A R+ D LV+PT ++ P K L + ++ E + R
Sbjct: 339 I-TVPDYIEMLNARRSLVARAAARIAPYDA-LVMPTTANAPPKIADLADDQAFARE-NIR 395
Query: 414 TLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
L + +M C +++P ++ + P+ + G D+ LL+
Sbjct: 396 ALRNCTFINMIDGCAISLPAHRHGDVPVGLMLAQSGGNDRKLLE 439
>gi|163856545|ref|YP_001630843.1| amidase [Bordetella petrii DSM 12804]
gi|163260273|emb|CAP42575.1| putative amidase [Bordetella petrii]
Length = 451
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 78/155 (50%), Positives = 101/155 (65%), Gaps = 3/155 (1%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
AR P+ GL +IKD+FDV G T GS ++ A+ AVVV LL GA IG+T +
Sbjct: 65 ARSPIDGLPVSIKDLFDVAGETTLAGSVA-RQGEPAADEHAVVVQRLLAAGAVIIGRTNM 123
Query: 129 DEFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
EFA+ G N HYGTP+NP + IPGGSSSG+AV+V + A+G+DT G VR+P
Sbjct: 124 VEFAYSGLGINPHYGTPLNPWDRATGRIPGGSSSGAAVSVTDGMALGAIGSDTGGSVRIP 183
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLA 221
A+ CG+ G++PS VSM GVLP S SLD++G LA
Sbjct: 184 AALCGLAGFKPSAWRVSMAGVLPLSTSLDSIGPLA 218
>gi|389696150|ref|ZP_10183792.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Microvirga sp. WSM3557]
gi|388584956|gb|EIM25251.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Microvirga sp. WSM3557]
Length = 432
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 120/410 (29%), Positives = 192/410 (46%), Gaps = 40/410 (9%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ +IKD+FDV G T GS RD A++ A +V L + GA +GKT + EF
Sbjct: 52 PLDGVIVSIKDLFDVAGETTLAGSIAL-RDAPPADKDATIVRRLRQAGAVILGKTNMVEF 110
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
AF G N HYGTP N PS IPGGSSSG+ V VA + ++G+DT G VR+PA+ G
Sbjct: 111 AFSGIGLNPHYGTPGNAADPSRIPGGSSSGAGVTVAEGTSEISIGSDTGGSVRIPAALNG 170
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
++G++P+ V + G P + SLD++G LAR+ + FA
Sbjct: 171 VVGFKPTAHRVPLDGAFPLAPSLDSIGPLARD---------------------VQDCAFA 209
Query: 252 DDIFQLSKVPKLKTIH-VISKAIESLSG--YQNPEHMNVGQYIASNVPSLKGLRAQSTSP 308
D I + P+L H ++ I G + E M V + + + L G A+
Sbjct: 210 DAIMA-GEEPRLLNAHPLVGLRIGVPRGRLFAQTEPM-VEKAFEAALKHLSGAGARIV-- 265
Query: 309 ENGTATL---KALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIK 365
++G L A ++V S+ E ++ +W+++ + V + +
Sbjct: 266 DHGIDDLLEAMADTTVTSSIASIEASEVHADWLEAKVAEIDPRVHWWIARSGKVPAPIYI 325
Query: 366 ILYKVRNEMRAALQRLLKDDKILVIPT--VSDP---PLKLNTKKTYSAEFHDRTLVLSSI 420
+ + R + AA+ L +L +PT +S P PL+ + K + D L ++
Sbjct: 326 RMLRRRRTLVAAMDERLAPLDVLALPTTAISAPLIAPLEADIKLYNKTD--DLILRNTTF 383
Query: 421 GSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQV 470
G+ +++PI E P+ + + HG D+ LLD + L + V
Sbjct: 384 GNQFDLTGISLPI-PGTERPVGLMLVARHGHDQRLLDIAASVETMLAQGV 432
>gi|59712093|ref|YP_204869.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Vibrio fischeri
ES114]
gi|59480194|gb|AAW85981.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Vibrio fischeri
ES114]
Length = 387
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 185/391 (47%), Gaps = 43/391 (10%)
Query: 77 KFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGIT 136
KF + D D+K G G+P W + +A A V L+LK GA +GKT +DEF FG+
Sbjct: 27 KFVVSDCIDIKNTPNGQGNPTWLLEQRKARENAPAVDLILKKGAIFVGKTQMDEFGFGLH 86
Query: 137 GENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYR 196
G N HYG N GGSSSG+ AV D LG D G +RVPA + G+ G++
Sbjct: 87 GHNPHYGPIPNKNSEGRFIGGSSSGAVAAVVNGDADIGLGIDFGGGIRVPALYAGLYGFK 146
Query: 197 PSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIFQ 256
S V+M G+ ++ ++G +A+N S + +V VL ++ + R++ D +F
Sbjct: 147 ASASAVNMQGIDCIAKEDTSLGWVAKNLSDIRKVATVLTPMSPL--VTVERIVVLDSLF- 203
Query: 257 LSKVP-----KLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENG 311
+ +P KL+T+ I+S S Y+ ++ + I + A+S +
Sbjct: 204 -ADIPEEAKTKLETL------IKS-SPYEVIRSKSISKIITTKA-------AESFKVLSA 248
Query: 312 TATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVR 371
T L+ L E W + K +G + ++ + + +I + R
Sbjct: 249 TRGLRNL----------------ELWYEKNKAAVGNEIKMQMKWLASLKYKDERIALEQR 292
Query: 372 NEMRAALQRLLKDDKILVIPTVSD--PPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
+ + L+ +L + +L++PT ++ PP+ ++ Y + + + L +S+ S++ Q+
Sbjct: 293 ELVISVLESILDEKTLLLMPTTANIAPPITATDEQLY--KLNAQILKYTSLASLADLPQL 350
Query: 430 AIPIGKYNEHPISISFITYHGGDKFLLDTVL 460
+P N+ P IS + G D+ L+D +
Sbjct: 351 HLPWFTVNDSPWGISLVGQKGMDRQLIDVAI 381
>gi|209695179|ref|YP_002263108.1| amidase [Aliivibrio salmonicida LFI1238]
gi|208009131|emb|CAQ79370.1| putative amidase [Aliivibrio salmonicida LFI1238]
Length = 388
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 179/387 (46%), Gaps = 34/387 (8%)
Query: 77 KFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGIT 136
KF + D D+K G G+P W A+ A VV LLLK GA +GKT +DEF FG+
Sbjct: 27 KFVVSDCIDIKDTPNGLGNPVWLAQQKVAKDNAPVVDLLLKKGAIFVGKTQMDEFGFGLH 86
Query: 137 GENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYR 196
G N HY NP + GGSS G+ AVA L D LGTD G +RVPA + G+ G++
Sbjct: 87 GNNPHYAAIKNPNSEGRLIGGSSCGAIAAVANGLADIGLGTDLSGGIRVPAVYAGLYGFK 146
Query: 197 PSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIFQ 256
S +M GV ++ ++G +A++ S + +V L ++ + R++ D +F
Sbjct: 147 SSSYAANMKGVYCIAKEETSLGWVAKSLSDIRKVATTLTPMSPL--MTVDRIVVLDSLF- 203
Query: 257 LSKVPKLKTIHVISKAIESLSGYQNPEHMNVG-QYIASNVPSLKGLRAQSTSPENGTATL 315
PE V + + P K +R+++ S T+
Sbjct: 204 ----------------------LDVPEEAKVKLEQLLEASPYYKVVRSKAISK---IITM 238
Query: 316 KALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNEMR 375
KA S + + I E WV+ P L + ++ + + +I + R+ ++
Sbjct: 239 KAAESFKVITATRGLRNI-EPWVEKNHPMLSNEIKMQLKWLSSLKYKDERIALEQRDLVK 297
Query: 376 AALQRLLKDDKILVIPTVSD--PPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPI 433
+ L+ LL + +L++PT ++ PP ++ Y + + L +S+ S++ Q+ +P
Sbjct: 298 SVLESLLDEKTLLLLPTTANIAPPETATDEQLY--KLNSLILKYTSLASLADLPQLHLPW 355
Query: 434 GKYNEHPISISFITYHGGDKFLLDTVL 460
N P +S I G D+ L+D +
Sbjct: 356 FTVNNSPWGVSLIGKKGMDRQLIDAAI 382
>gi|392941923|ref|ZP_10307565.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Frankia sp. QA3]
gi|392285217|gb|EIV91241.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Frankia sp. QA3]
Length = 424
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/169 (47%), Positives = 96/169 (56%)
Query: 67 PAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKT 126
P PL GL+ A+KD+F V GY G G+P W + A V L GA G
Sbjct: 22 PTGSGPLDGLRVAVKDLFAVGGYRIGAGNPRWLAEAPVEPADAEAVRALRAAGAAIAGIA 81
Query: 127 VLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
DE AF ++G N HYGTP NP P + GGSSSG A AVAA D LGTDT G +RVP
Sbjct: 82 QTDELAFSLSGANVHYGTPPNPAAPDRVTGGSSSGPASAVAAGWADVGLGTDTAGSIRVP 141
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLL 235
AS CG+ G RP+ G V+ GVL + S DTVG L + +L VG VLL
Sbjct: 142 ASVCGLYGLRPTRGAVAAGGVLGLAPSFDTVGWLTADPGLLRAVGEVLL 190
>gi|374577275|ref|ZP_09650371.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Bradyrhizobium sp. WSM471]
gi|374425596|gb|EHR05129.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Bradyrhizobium sp. WSM471]
Length = 478
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 187/408 (45%), Gaps = 34/408 (8%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL GL F++KD DV G T P++ + A+ T+ VV + GA +GKT +D+F
Sbjct: 85 PLYGLVFSVKDCIDVAGEQTTSACPEFA---YTAKDTSPVVADAIAAGAIYLGKTNMDQF 141
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G+ G YG NP P +IPGGSSSG+AV+VA FA GTDT G RVPAS+CG
Sbjct: 142 ATGLVGVRSPYGIARNPHNPDYIPGGSSSGAAVSVATGTSSFAFGTDTGGSGRVPASYCG 201
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
+ G++P+ G S G++ +S DTV L R+ H V VL + +A + + FA
Sbjct: 202 VTGFKPAPGAFSQRGMVYACRSFDTVSLYTRDPRDGHDVYRVLARRDAEDCFSP--VDFA 259
Query: 252 DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENG 311
Q S + +++ + + LS + N E + + L+ L S +
Sbjct: 260 GWTEQASPA---RPLNIATPRPDQLSFFGNAETEAL---FGDGLRKLRQLDLSVASVD-- 311
Query: 312 TATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAIN--TTQDNIKILYK 369
A +++ +M + + A P G + ++ T D + LYK
Sbjct: 312 FAPFISVNDLMFFGPFLAERDVSVGAFLDANPDAGVKIVRDLVIGSRKFTAADAYRALYK 371
Query: 370 VRNEMRAALQRLLKDDKILVIPT---------VSDPPLKLNTKKTYSAEFHDRTLVLSSI 420
V+ E++ +L+ +D LV+PT V+ PL N Y + + L L++I
Sbjct: 372 VK-EVQRSLRDFWQDHDALVVPTVGTVLSIDDVARDPLTANFNNGYYTNYAN-PLGLAAI 429
Query: 421 GSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQE 468
+ +P G ++F+ G ++ L D ++ E
Sbjct: 430 AVPNAVTAAGVPYG--------VTFLAPAGRERLLTDLACAFTEAAAE 469
>gi|120404134|ref|YP_953963.1| amidase [Mycobacterium vanbaalenii PYR-1]
gi|119956952|gb|ABM13957.1| Amidase [Mycobacterium vanbaalenii PYR-1]
Length = 364
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 120/387 (31%), Positives = 167/387 (43%), Gaps = 36/387 (9%)
Query: 76 LKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGI 135
++ A+KD+FDV G VT G+P A A V LL AT + KT DE A G+
Sbjct: 1 MRVAVKDLFDVAGTVTAAGNPTLAAGPAAAHHAAAVAALLSAG-ATVVAKTATDELAMGM 59
Query: 136 TGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGY 195
G N HYGTP NP P +PGGSSSGSA VA + LGTDT G +RVPA+FCG+ G
Sbjct: 60 FGVNAHYGTPPNPAAPDRVPGGSSSGSASLVAGGQAELGLGTDTGGSIRVPAAFCGLAGL 119
Query: 196 RPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIF 255
R +HG + GV + DTVGL+A S L + VL PR L+ D+
Sbjct: 120 RTTHGRIDTAGVRAMAPEFDTVGLMAVETSFLAKAFSVLTTPR--TPREVTALVLLTDLA 177
Query: 256 QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTATL 315
L+ + E + GL ++ S G +
Sbjct: 178 ALASADVAARTRATAARWA--------ERL--------------GLPLRTASLGGGPDPV 215
Query: 316 KALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNEMR 375
+ +M S Q ++ WV A+P LG + ER+ A + T +++ R R
Sbjct: 216 RVFWPLM-SAQLWDTN---GAWVAEARPVLGTGIAERIRAAASVTDAEVEVAEAQRTRFR 271
Query: 376 AALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGK 435
L LL + V+PT D + DR L S++G Q+ +P G
Sbjct: 272 EHLHGLLA-GAVAVLPTTMDAAPARTADHAALMAYRDRNLAFVVPASLAGAPQLTMPQGT 330
Query: 436 Y------NEHPISISFITYHGGDKFLL 456
+ P+ S + G D+ LL
Sbjct: 331 VTDAGCGTDAPVGASLLGLPGDDELLL 357
>gi|410646870|ref|ZP_11357315.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Glaciecola agarilytica NO2]
gi|410133574|dbj|GAC05714.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Glaciecola agarilytica NO2]
Length = 373
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 196/417 (47%), Gaps = 55/417 (13%)
Query: 52 FLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVV 111
F E+FEL L G +KD DV G+VT GS + E A V
Sbjct: 4 FTEQFEL---------GQNDELTG---GVKDNIDVAGFVTQAGSEALAHNPKATEH-ADV 50
Query: 112 VTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLV 171
V +L +G +GK + E A+G+TG N + GTPVN P +IPGGSSS A AVA +
Sbjct: 51 VNAMLSSGVKLVGKLNMHELAYGMTGVNAYRGTPVNYLFPDYIPGGSSSACAAAVAQGAI 110
Query: 172 DFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVG 231
DF++GTDT G +RVPA+ CG+ G +P++G +S GVLP +LD VG LA +A L R
Sbjct: 111 DFSIGTDTGGSIRVPAACCGVYGLKPTYGRISRKGVLPQESTLDCVGPLAFSAEKLIRA- 169
Query: 232 HVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYI 291
+ +++ + + + DI +L KV + H I ++ G + E + Q
Sbjct: 170 -----MQSIDSTFSP--VASKDIIKLGKV-TVNAKHTIQALVD---GAIDKEFI---QLR 215
Query: 292 ASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFE 351
+ +PSL ++A V L L +E + +V++ K LG +V
Sbjct: 216 PAALPSL----------------VEAF-EVGLPLMNFEMCQAFGHFVETGK--LGNDVQN 256
Query: 352 RVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFH 411
R+L A + + + VR + + R L+ LV+PT++ PLK A
Sbjct: 257 RLLAARDIDESIVAKANVVRKKFTQEVDRALRGVDALVLPTLAAFPLKRT-----DALAG 311
Query: 412 DRTLVLSSIG---SMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDS 465
L +SS+ ++SG + IPI P+ + + G D+ + + DS
Sbjct: 312 QNDLQISSLTRPFNLSGHPAITIPIRNNLGKPVGMQLVGAKGNDEMICYIAQKISDS 368
>gi|313679128|ref|YP_004056867.1| amidase [Oceanithermus profundus DSM 14977]
gi|313151843|gb|ADR35694.1| Amidase [Oceanithermus profundus DSM 14977]
Length = 441
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 95/152 (62%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
P+ G+ +KD+ DV G VT GS R A A V L + GA +GK+ L+E
Sbjct: 62 PVDGVPVLVKDLLDVTGTVTAAGSAVLARLRPPAASDAPAVRNLQRAGAVVVGKSQLNEL 121
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
AF G N H+GTP N P +PGGSSSGSAVAVA LV A+GTDT G VR+PA+F G
Sbjct: 122 AFSGLGLNPHFGTPQNALNPDWVPGGSSSGSAVAVARGLVPLAVGTDTGGSVRIPAAFNG 181
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
++G++PS G +S GV P + SLDTVG LAR
Sbjct: 182 LVGFKPSWGRISTRGVTPLAVSLDTVGPLARR 213
>gi|398913736|ref|ZP_10656595.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM49]
gi|398179821|gb|EJM67420.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM49]
Length = 403
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 120/409 (29%), Positives = 186/409 (45%), Gaps = 32/409 (7%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
PLAGL +IKD+FDV+G VT GS + A A V L GA +G+T + E
Sbjct: 18 SPLAGLPISIKDLFDVRGQVTTAGSSLLAQ-APPALDDAFAVARLRAAGAVMLGRTNMSE 76
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FAF G N HYGTPVNP I GGSSSG+AV+VA + LGTDT G +R+PA+FC
Sbjct: 77 FAFSGLGLNPHYGTPVNPYDNDRIAGGSSSGAAVSVALDMAVAGLGTDTGGSLRIPAAFC 136
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLL-QLNAVEPR--RARR 247
++G++P+ V +G LP ++SLD++G +A + + + VL QL P R R
Sbjct: 137 ALVGFKPTASRVPTLGTLPLAESLDSIGAIAHSVADCILLDQVLSGQLLDTRPANLRGLR 196
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
+ D F L + + + A E + N + + S + L +
Sbjct: 197 VAVTRD-FVLDNLDR-----EVGAAFERVLKLLNDAGAVIHWFDFSELCELPSIN----- 245
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSA-KPRLGYNVFERVLEAINTTQDNIKI 366
E+G L E ++ W++S R V +R+ + + +
Sbjct: 246 -ESG------------GLTAAESWNFHQHWLQSELDTRYDPRVAQRIRRGASLSAADYLE 292
Query: 367 LYKVRNEMRAALQRLLKDDKILVIPTVS-DPPLKLNTKKTYSAEFHDRTLVL--SSIGSM 423
L R + + L D + ++PTV+ PL +K F LVL +S+ +
Sbjct: 293 LIGHRRRLSEEAKARLSDFDVWLMPTVACTAPLLKELEKNDELFFATNALVLRNTSVINF 352
Query: 424 SGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNI 472
C +++P E I +S +G D +L + L E +++
Sbjct: 353 IDGCAISVPCHLPGELAIGLSICGLNGHDARVLQAARSIEVLLSEYLSV 401
>gi|377563803|ref|ZP_09793134.1| putative amidase [Gordonia sputi NBRC 100414]
gi|377529017|dbj|GAB38299.1| putative amidase [Gordonia sputi NBRC 100414]
Length = 487
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/160 (45%), Positives = 97/160 (60%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
+A PL G A+KDVF V G+ TG G P +++ A A V LL +GA G
Sbjct: 132 SAPGPLTGTTVAVKDVFAVAGFATGGGVPAYEQSAPIATEHATAVARLLNSGAHIRGIAR 191
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
D+FA+ + G+N H+GTP N +P+ +PGGSSSG A AVA D L TDT G +R PA
Sbjct: 192 TDQFAYSMAGDNPHHGTPPNAAVPAALPGGSSSGPASAVAHGDADLGLATDTAGSIRTPA 251
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASIL 227
S+ G+ G R +HG+VS G+LP + D +GLL+R+ IL
Sbjct: 252 SYQGLWGLRSTHGSVSTRGLLPLAPDFDAIGLLSRDPDIL 291
>gi|37526114|ref|NP_929458.1| hypothetical protein plu2200 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36785544|emb|CAE14493.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 447
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/158 (50%), Positives = 103/158 (65%), Gaps = 5/158 (3%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R PL G+ FA+KD FD+KG VTG G+ + + +A TA VV LLK G GK
Sbjct: 69 RGPLHGIPFAVKDFFDLKGKVTGGGTNCFSQ---KAYVTAPVVATLLKQGMILTGKHRAV 125
Query: 130 EFAFGITGENKHYGTPVNPQMPSH--IPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
E G TG ++ TP+NP S PGGSS+GSAVAVAA L AL TDT G R+PA
Sbjct: 126 ELGMGATGIMENSPTPLNPWGQSQRVAPGGSSNGSAVAVAAGLTPIALVTDTGGSARIPA 185
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNAS 225
++CG+ G+RPS G +S G+LP SQ++DTVG++A++AS
Sbjct: 186 AWCGVSGFRPSMGNLSSSGMLPLSQTMDTVGIIAKHAS 223
>gi|384431978|ref|YP_005641338.1| amidase [Thermus thermophilus SG0.5JP17-16]
gi|333967446|gb|AEG34211.1| Amidase [Thermus thermophilus SG0.5JP17-16]
Length = 434
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 173/393 (44%), Gaps = 37/393 (9%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R PL GL IKD+F VKG T G+ K A V L + GA KT +
Sbjct: 62 RGPLHGLPLTIKDLFPVKGMPTRAGT---KAPLPPLPEEARAVRRLREAGALLFAKTNMH 118
Query: 130 EFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
E A GITGEN G N PS GGSS GSAVAVA + +LGTDT G +R+PA F
Sbjct: 119 EIALGITGENPWTGPVRNAVDPSRQAGGSSGGSAVAVALGIGLASLGTDTGGSIRIPAGF 178
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
G++G++PS+G +S+ G LP S+S D G L R+ H
Sbjct: 179 NGVVGFKPSYGRISLEGALPLSRSTDHAGPLTRSVRDAH--------------------- 217
Query: 250 FADDIFQLSKVPKLKTIH--VISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
F +I +P L+ + V ++ L G E + ++P+L+ + +
Sbjct: 218 FLTEILAGESIP-LEAVQNPVFGVPLDFLEGRLGVEVRKAFTRLLEDLPALRAEVREVSL 276
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
P L+ + V L RYE I+E+ +K V E +L + T+ + +
Sbjct: 277 P------LRGVYEVYTRLVRYEAARIHEKALKEHPEGFSPQVREALLAGLALTEKDYRDA 330
Query: 368 YKVRNEMRAALQRLLKDDKILVIPT--VSDPPLKLNTKKTYSAEFHDRT--LVLSSIGSM 423
R +R L + L+ L++P + PPL + S R + L+ S+
Sbjct: 331 VAEREVLRLELAKALRGVDALLLPVQPLPAPPLGTEEVELESGRKGHREAFITLTLPFSL 390
Query: 424 SGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
G +A+P K P+ + + +G D +L
Sbjct: 391 LGVPTLALPFAKVEGMPVGLQVVGAYGEDGKVL 423
>gi|423686252|ref|ZP_17661060.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Vibrio fischeri
SR5]
gi|371494320|gb|EHN69918.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Vibrio fischeri
SR5]
Length = 387
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 185/391 (47%), Gaps = 43/391 (10%)
Query: 77 KFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGIT 136
KF + D D+K G G+P W + +A+ A V L+LK GA +GKT +DEF FG+
Sbjct: 27 KFVVSDCIDIKNTPNGQGNPTWLLEQKKAKENAPAVDLILKKGAIFVGKTQMDEFGFGLH 86
Query: 137 GENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYR 196
G N HYG N GGSSSG+ AV D LG D G +RVPA + G+ G++
Sbjct: 87 GHNPHYGPIPNKNSEGRFIGGSSSGAVAAVVNGDADIGLGIDFGGGIRVPALYAGLYGFK 146
Query: 197 PSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIFQ 256
S V+M G+ ++ ++G +A+N S + +V VL ++ + R++ D +F
Sbjct: 147 ASASAVNMQGIDCIAKEDTSLGWVAKNLSDIRKVATVLTPMSPL--VTVERIVVLDSLF- 203
Query: 257 LSKVP-----KLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENG 311
+ +P KL+T+ I+S S Y+ ++ + I + A+S +
Sbjct: 204 -ADIPEEAKTKLETL------IKS-SPYEVIRSKSISKIITTKA-------AESFKVLSA 248
Query: 312 TATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVR 371
T L+ L E W + K +G + ++ + + +I + R
Sbjct: 249 TRGLRNL----------------ELWYEKNKAAVGNEIKMQMKWLASLKYKDERIALEQR 292
Query: 372 NEMRAALQRLLKDDKILVIPTVSD--PPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
+ + L+ +L + +L++PT ++ PP ++ Y + + + L +S+ S++ Q+
Sbjct: 293 ELVISVLESILDEKTLLLMPTTANIAPPTTATDEQLY--KLNAQILKYTSLASLADLPQL 350
Query: 430 AIPIGKYNEHPISISFITYHGGDKFLLDTVL 460
+P N+ P IS + G D+ L+D +
Sbjct: 351 HLPWFTVNDSPWGISLVGQKGMDRQLIDVAI 381
>gi|242240849|ref|YP_002989030.1| amidase [Dickeya dadantii Ech703]
gi|242132906|gb|ACS87208.1| Amidase [Dickeya dadantii Ech703]
Length = 447
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/158 (47%), Positives = 103/158 (65%), Gaps = 3/158 (1%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
A R L G+ ++KD+FDV G T GS RD A A VV LL+ GA +GKT
Sbjct: 65 APRSALEGIPVSVKDLFDVSGEPTTAGS-RVLRDVPAASGHAAVVARLLQAGAVVLGKTN 123
Query: 128 LDEFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
+ EFA+ G N HYGTP NP ++ IPGGSSSG+AV+VA + A+G+DT G VR+
Sbjct: 124 MTEFAYSGLGLNPHYGTPANPWDRLTRRIPGGSSSGAAVSVADGMCYGAIGSDTGGSVRI 183
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
PA+FCG++G++P+ + GVLP S +LD+VG++AR+
Sbjct: 184 PAAFCGLVGFKPTAQRIDRAGVLPLSTALDSVGVIARD 221
>gi|398848408|ref|ZP_10605225.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM84]
gi|398248513|gb|EJN33924.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM84]
Length = 371
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 133/400 (33%), Positives = 183/400 (45%), Gaps = 49/400 (12%)
Query: 74 AGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAF 133
AG + +KD DV G T S ++ AER A VV+ LL NGA GK L E AF
Sbjct: 13 AGPRVVVKDTIDVAGTATRASSQALEQAPL-AERHAEVVSQLLANGARLTGKVSLHELAF 71
Query: 134 GITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGIL 193
G TG N + GT NP+ P IPGGSSSGSA AVAA L DF+LGTDT G VR+PA CG+
Sbjct: 72 GTTGINHYTGTAANPRFPGRIPGGSSSGSAAAVAAGLADFSLGTDTGGSVRIPACCCGVF 131
Query: 194 GYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADD 253
G +P+ G VS GV+P SLD VG A A P R + D
Sbjct: 132 GLKPTFGRVSRKGVMPARSSLDCVGPFA-----------------ASLPMLVRAMSMIDP 174
Query: 254 IFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTA 313
F ++VP I V+ E + H G AS +P G
Sbjct: 175 TFVPAQVPAKARIGVLRVTAE--AAIHKVVH---GALTASGLPL-------------GNV 216
Query: 314 TLK----ALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
LK A + M+ + R F+ +++ K +G ++ R+ A TT + +
Sbjct: 217 ELKHFGAAYDAGMVVINRETFEGC-GHLLETGK--VGTDIAGRLAAAGKTTDSALAEAEE 273
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
VR + + L +L +PT+ D PL+L A +LV ++SG +
Sbjct: 274 VRRRFTEEVDQALASFDVLALPTMPDFPLRLEEAADTRAVLGMTSLVRPF--NLSGHPAL 331
Query: 430 AIPIGKYNEHPISISFITYHGGDKFLLDT----VLDLYDS 465
+IP+G P+ + + G D+ LL +L+LY S
Sbjct: 332 SIPLGSAAGLPVGLQLVAAKGADEKLLAVAERLLLNLYQS 371
>gi|147767325|emb|CAN68995.1| hypothetical protein VITISV_008861 [Vitis vinifera]
Length = 503
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/159 (58%), Positives = 111/159 (69%), Gaps = 1/159 (0%)
Query: 39 RNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDW 98
R K R DFGAF++R +L+P PQP PP A PL L FA+ DVFD++GYVTGFG+PDW
Sbjct: 24 RKLKKTIREDFGAFVQRLQLLPPPQPAPPKAPHPLTNLSFAVSDVFDIEGYVTGFGNPDW 83
Query: 99 KRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGS 158
R H A RT+ VV+ L++ GATC GKTV+DE A+ I GENKHYGTP NP PS IPGGS
Sbjct: 84 ARTHDTASRTSPVVSALVEGGATCTGKTVVDEMAYSINGENKHYGTPTNPAAPSRIPGGS 143
Query: 159 SSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGIL-GYR 196
SSG+AVAVAA VDF+L C+ A G L G+R
Sbjct: 144 SSGAAVAVAANFVDFSLAMKVFSCLLRRAISGGYLSGWR 182
>gi|430810142|ref|ZP_19437257.1| amidase [Cupriavidus sp. HMR-1]
gi|429497376|gb|EKZ95909.1| amidase [Cupriavidus sp. HMR-1]
Length = 440
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 123/397 (30%), Positives = 179/397 (45%), Gaps = 48/397 (12%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAGL +IKD+FDV+G VT GS A+ + V L GA IG+T + EF
Sbjct: 69 PLAGLPISIKDLFDVRGQVTRAGSKALD-GGAPAQADSPAVARLRAAGAVLIGRTNMSEF 127
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
AF G N HYGTP P P + GGS+SG AV+VA + ALGTDT G +R+P++FCG
Sbjct: 128 AFSGLGLNPHYGTPRTPFDPERVAGGSTSGGAVSVAEDMAVAALGTDTGGSIRIPSAFCG 187
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL----LQLNAVEPRRARR 247
+ G++P+ V + G +P S SLD+ G LAR+ + + VL L A + R R
Sbjct: 188 LTGFKPTARRVPLDGAVPLSTSLDSAGPLARSVACCVAMDAVLSGETLDTRAAD-LRGLR 246
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
D P+ +++A E+ + + + + + P L+ L
Sbjct: 247 FYVTRDFVCDGLDPE------VAQAFEAALARLSAQGATIVPF---DFPELRRL------ 291
Query: 308 PE-NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKI 366
PE NG L A S W ++ G +RV + I +
Sbjct: 292 PEINGGGGLTAAESW--------------AWHRTLLAAKGDQYDQRVAQRIRRGEKQSAA 337
Query: 367 LYKVRNEMRAALQR----LLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVL---SS 419
Y R A+Q+ LL+D ++PTV+ P +L+ + F LVL S
Sbjct: 338 DYIDLLAARCAMQQRAAVLLRDADAWLMPTVAVRPPRLDALERDEDFFAVNGLVLRNASV 397
Query: 420 IGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
I + GC +P G+ I + HG D +L
Sbjct: 398 INFLDGCAAT-LPAGEG----IGLGVCGLHGSDARVL 429
>gi|411119354|ref|ZP_11391734.1| amidohydrolase, AtzE family [Oscillatoriales cyanobacterium JSC-12]
gi|410711217|gb|EKQ68724.1| amidohydrolase, AtzE family [Oscillatoriales cyanobacterium JSC-12]
Length = 510
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 124/230 (53%), Gaps = 19/230 (8%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ F +KD+FD+ G +T GS + A + A ++T L + GA +G +DE+
Sbjct: 111 PLAGVPFGVKDLFDIAGVITLAGS-KINAERSPATQDATLITRLKQAGAILVGAQNMDEY 169
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+G EN HYG NP P+ + GGSS GS AVA+ +V F+LG+DT G +RVP++FCG
Sbjct: 170 AYGFVTENSHYGPSRNPHDPTRMTGGSSGGSVAAVASGMVPFSLGSDTNGSIRVPSAFCG 229
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRAR----- 246
I G +P++G +S P SLD +G AR+ + + +L + +P ++
Sbjct: 230 IFGLKPTYGRLSRARTYPFVGSLDHLGPFARSVRDIALIFDLLQGADPDDPVCSKRPPQP 289
Query: 247 ------------RLIFADDIFQLSKVPK-LKTIHVISKAIESLSGYQNPE 283
R+ ADD F S P+ L+ + +++A+ + PE
Sbjct: 290 CLPELAKGIEGLRIAIADDYFAKSAEPEALEAVTTVAQALSATQHVTIPE 339
>gi|358398411|gb|EHK47769.1| hypothetical protein TRIATDRAFT_316778 [Trichoderma atroviride IMI
206040]
Length = 715
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 107/171 (62%), Gaps = 3/171 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ FAIKD DV+G VT + + A TA + LL GA IGK L++
Sbjct: 312 PLFGIPFAIKDNIDVEGVVTTAACESYA---YTATFTAPSIQHLLDAGAIYIGKLNLEQL 368
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G+ G YG H+PGGSSSGSAVAVAA LV FA+GTDT G VR PA+F G
Sbjct: 369 ATGLVGRRSPYGDLHCFHSKDHVPGGSSSGSAVAVAAGLVSFAIGTDTAGSVRAPAAFNG 428
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
++G++P+ GT+S G +P QSLDT+G+LA + + +V +VL + ++++P
Sbjct: 429 VVGFKPTKGTISARGAVPACQSLDTIGVLAPSVADARQVWYVLDRHDSLDP 479
>gi|197104619|ref|YP_002129996.1| amidase [Phenylobacterium zucineum HLK1]
gi|196478039|gb|ACG77567.1| amidase [Phenylobacterium zucineum HLK1]
Length = 425
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 121/380 (31%), Positives = 181/380 (47%), Gaps = 47/380 (12%)
Query: 32 AETLRRRR--NPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGY 89
AE L R R +P+L AF+ F+ PP + L G FAIKD+FDV G
Sbjct: 4 AEALARIRTYDPRLK------AFVRVFD--------PPLLGEDLDGPTFAIKDLFDVAGV 49
Query: 90 VTGFGS-----PDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGT 144
TG G+ P R ER LL+ G + +GKT E A+G G N+ G
Sbjct: 50 PTGGGAQVPLDPSPTRHSRAVER-------LLQAGWSAVGKTHTVELAYGGWGTNRAVGA 102
Query: 145 PVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTV 202
P NP P PGGSSSGSAVAVAA L D ALG+DT G VR+PA+ CG++G +P G V
Sbjct: 103 PWNPWDPKVHRAPGGSSSGSAVAVAAGLCDAALGSDTGGSVRIPAAVCGVVGLKPGRGLV 162
Query: 203 SMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPK 262
S+ GV P S +LDTVG LAR+ + R L ++ + A R F D LS
Sbjct: 163 SLRGVHPLSPALDTVGTLARSVEMAAR---ALAAISGPDGAAAVREPF-DSEAALSM--D 216
Query: 263 LKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLK--GLRAQSTSPENGTATLKALSS 320
++ V + ++ L H +VG+ + L+ G+ + P + A +
Sbjct: 217 VRGRRVAAIPLDDLGEV----HPDVGRLYLEAIERLRSAGVAVEMVRPPSALEQSFAPNG 272
Query: 321 VMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNEMRAALQR 380
++++ + + I+ E ++ + + R + T ++ +++ R E +AA
Sbjct: 273 LLMAGEGWR---IWGERIQRHAEVMDPWIVRRFEAGRDVTDQRLEDVHRRRAEDQAAFHA 329
Query: 381 LLKDDKILVIPT--VSDPPL 398
+ L+ PT + PP+
Sbjct: 330 WIAGWDGLLSPTCPIPAPPI 349
>gi|337280584|ref|YP_004620056.1| amidase [Ramlibacter tataouinensis TTB310]
gi|334731661|gb|AEG94037.1| amidase-like protein [Ramlibacter tataouinensis TTB310]
Length = 466
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 113/370 (30%), Positives = 164/370 (44%), Gaps = 27/370 (7%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ A+KD+ +++G + GS WK A RTA + L+ G +GKT EF
Sbjct: 76 PLHGIPIALKDLVELEGKMVTGGSEVWKT--RRATRTATLAQKLIAQGMIVLGKTHTVEF 133
Query: 132 AFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A G G N GTP NP + PGGSSSGSAVAVAA L +A+GTDT G VR+PAS+
Sbjct: 134 AMGGWGTNSLRGTPWNPWDMARARTPGGSSSGSAVAVAAGLAPWAVGTDTGGSVRMPASW 193
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
CGI G + + G VS GVLP S +LDT G +AR+ LL + P R L
Sbjct: 194 CGITGLKTTIGRVSTHGVLPLSPTLDTPGPMARSVE-----DAALLYMAMQGPDRQDPLT 248
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESLSGYQNPE---HMNVGQYIASNVPSLKGLR--AQ 304
+P + + + + + + PE +A+ SL+ L
Sbjct: 249 LG--------LPFTDPMPTLKRGVRGMRLARMPEVERQFASADVLAAYDRSLQDLERLGA 300
Query: 305 STSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNI 364
P + +++ L + E +Y E + L +V R+ N + +
Sbjct: 301 EIVPVDLPFLFADVAAFNLRIMAAESYALYHELIDDESAPLDPHVRPRIAAGRNISAQSY 360
Query: 365 KILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMS 424
+VR EM+ + L+ L+ PT L L A H + G+
Sbjct: 361 IEALQVRQEMKRKFESALEGIDALLTPTTMTTALPLEEVDQTKAPAH-----FTRFGNFL 415
Query: 425 GCCQVAIPIG 434
C +A+P G
Sbjct: 416 DLCGLALPNG 425
>gi|293602932|ref|ZP_06685371.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Achromobacter
piechaudii ATCC 43553]
gi|292818726|gb|EFF77768.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Achromobacter
piechaudii ATCC 43553]
Length = 460
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/156 (50%), Positives = 101/156 (64%), Gaps = 4/156 (2%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ A+KD+ D+ G T GSP + A RTA +V L + GA +GKT + +F
Sbjct: 71 PLHGVPIALKDLIDITGRPTTIGSP--IHANTVAARTAELVQQLQRAGAIILGKTHMVQF 128
Query: 132 AFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A G G N+H GTP NP IPGGSSSGSAVAVA +L A+GTDT G VRVPAS+
Sbjct: 129 AMGAWGFNQHMGTPRNPWDDHVHRIPGGSSSGSAVAVAGRLAPAAIGTDTGGSVRVPASY 188
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNAS 225
CGI G +P+ G +S GV+ SQ+LD+VG+ A +A+
Sbjct: 189 CGITGLKPTVGRISSRGVVTLSQTLDSVGIFAHSAA 224
>gi|70606696|ref|YP_255566.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfolobus
acidocaldarius DSM 639]
gi|449066919|ref|YP_007434001.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfolobus
acidocaldarius N8]
gi|449069191|ref|YP_007436272.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfolobus
acidocaldarius Ron12/I]
gi|68567344|gb|AAY80273.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfolobus
acidocaldarius DSM 639]
gi|449035427|gb|AGE70853.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfolobus
acidocaldarius N8]
gi|449037699|gb|AGE73124.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfolobus
acidocaldarius Ron12/I]
Length = 395
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 192/415 (46%), Gaps = 60/415 (14%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L+ LKF+IKD+ D+KG T GS + + + A VV +L+ G IGKT EFA
Sbjct: 27 LSNLKFSIKDIIDIKGVPTTAGSRIL--NDYIPDTNAYVVEKILEEGGEIIGKTNTHEFA 84
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G T + +G NP I GGSS G+AV+VA LVD +GTDT G VR+PA+ CG+
Sbjct: 85 MGATNTSSIFGPAKNPYDIERISGGSSGGAAVSVALGLVDVGVGTDTGGSVRIPAALCGV 144
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR----- 247
+G++PS G + G++P S S+DTVG + ++ L+RV V L V + RR
Sbjct: 145 IGFKPSIGLIPTDGIIPFSWSIDTVGFIVKDMQTLNRVLEVTLTDKTVLVSQIRRRPRVG 204
Query: 248 -LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQST 306
+F DD ++S+ K +++L+ Y + +K + +
Sbjct: 205 LFLFGDD--EVSRALK--------PVVDTLNNYFD----------------IKEIHNEIL 238
Query: 307 SPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKI 366
+G K + S R FK +++ + R+LE + KI
Sbjct: 239 EKYSGDIRRKIVLPEAYSYHRKWFKERKDDYFPDVR---------RLLE------NGSKI 283
Query: 367 L-YKVRNEMRA------ALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSS 419
L Y+ + +R+ ++ D +L+ PT K++ F ++ + +
Sbjct: 284 LGYEYVDALRSRHVLIREYMKIFSDVDVLISPTTKVVAPKISEVIGNELTFREKLVSNTE 343
Query: 420 IGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIAS 474
I +++G ++IP+ + N P+ + G+ + TVLD+ + + V S
Sbjct: 344 IFNVTGAPSISIPVAQLNGLPVGLMV----SGELYQDGTVLDIAKRILDIVGFIS 394
>gi|398801495|ref|ZP_10560737.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pantoea sp. GM01]
gi|398091816|gb|EJL82244.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pantoea sp. GM01]
Length = 447
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 186/392 (47%), Gaps = 34/392 (8%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
AR P+ GL +IKD+FDV G VT GS + A A +V L + GA +GKT +
Sbjct: 64 ARSPIDGLPISIKDLFDVAGEVTLAGS-HLLSNGTPAAANASMVERLQQAGAALVGKTNM 122
Query: 129 DEFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
EFAF G N HYGTP NP + IPGGSSSG+AVAVA + A+GTDT G VR+P
Sbjct: 123 TEFAFTGLGINPHYGTPANPWQRTEKRIPGGSSSGAAVAVADGMCLAAVGTDTGGSVRIP 182
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRAR 246
A+ CG+ G++PS + G LP + SLD++G++A H V L L++V
Sbjct: 183 AALCGLTGFKPSASRIDQRGTLPLAASLDSIGVIA------HDVRSCWL-LDSV------ 229
Query: 247 RLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQST 306
AD + + +L H + L+G +H++ A+ + +L+ LRAQ
Sbjct: 230 ---IADQPLVMDQR-ELSDAHFVIPQTRVLAGLD--QHVS-----AAWLRALEVLRAQGV 278
Query: 307 S----PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQD 362
P + A L +++ + +E ++ + S V R+ +
Sbjct: 279 QLTELPLDELAELDTMNARG-GITAWEAWQWHQAYALSQPDAYDPQVLTRIKRGSLLNAE 337
Query: 363 NIKILYKVRNEMRAALQRLLKDDKILVIPTVS--DPPLKLNTKKTYSAEFHDRTLVLSSI 420
+ LY+ R + + ++ + +++PTV P L + + L +S+
Sbjct: 338 DAAELYQRRADWQQRVENAVAPFDGILMPTVPLIAPTLAELDDPARYMQVNMLMLRNTSV 397
Query: 421 GSMSGCCQVAIPIGKYNEHPISISFITYHGGD 452
+M C +++P + P+ + + HG D
Sbjct: 398 INMLDGCSISLPCHQPGAAPVGLMLSSTHGND 429
>gi|386775184|ref|ZP_10097562.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Brachybacterium paraconglomeratum LC44]
Length = 475
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 125/406 (30%), Positives = 190/406 (46%), Gaps = 52/406 (12%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L GL A+KD DV G VT GS + RDH +A VV L ++GA +G T L EFA
Sbjct: 72 LDGLPVAVKDNLDVAGRVTTMGS-EIFRDHVPTG-SAAVVDRLEEHGAVRLGATNLHEFA 129
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G+T EN H+G NP S PGGSS GSAVAVA+ + ALGTDT G +R+PA+ CGI
Sbjct: 130 LGVTTENPHHGICRNPWDTSRTPGGSSGGSAVAVASGMALAALGTDTSGSIRIPAAACGI 189
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
+G +P++G +S +G P + SLD VG+L S + +L L+ +PR
Sbjct: 190 VGLKPTYGRISSVGCYPEAWSLDHVGVL---TSSVADAALLLDTLSGHDPRGP------- 239
Query: 253 DIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQ----YIASNVPSLKGL-RAQSTS 307
S +P T S +P + +G + A P+++G+ R
Sbjct: 240 -----SSLPLPPTT--------SRQELDDPRPLRIGVEEEFFFAGIDPAVEGIVREALEG 286
Query: 308 PENGTATLKALSSVMLS--------LQRYEFKTIYEEWVKSAKPRLGYNVFERVLE--AI 357
ATL +S LS + E +E ++ G +V R++E A+
Sbjct: 287 LTRAGATLVPISLPSLSDAVFALTVIDTAETTAFHETQLRRHGELYGEDV-RRLVECGAL 345
Query: 358 NTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEF----HDR 413
T D ++ ++R+ +RA R D ++ PT+ P++ S E DR
Sbjct: 346 ATAVDYVRA-QQIRSLVRAEFARAFADVDVIASPTL---PIRTPRIGETSVEVGGVTRDR 401
Query: 414 TLVLSSI---GSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
L + +++G V++P G + P+ + I G+ +L
Sbjct: 402 DAELMRLVGPSNLAGIPSVSVPCGMLDGMPVGLQLIGPALGEGAVL 447
>gi|55981766|ref|YP_145063.1| amidase [Thermus thermophilus HB8]
gi|55773179|dbj|BAD71620.1| probable amidase [Thermus thermophilus HB8]
Length = 434
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 118/391 (30%), Positives = 173/391 (44%), Gaps = 33/391 (8%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R PL GL +KD+F VKG T G+ K A V L + GA KT +
Sbjct: 62 RGPLHGLPLTVKDLFPVKGMPTRAGT---KAPLPPLPEEARAVRRLREAGALLFAKTNMH 118
Query: 130 EFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
E A GITGEN G N PS GGSS GSAVAVA + +LGTDT G +R+PA F
Sbjct: 119 EIALGITGENPWTGPVRNAVDPSRQAGGSSGGSAVAVALGIGLASLGTDTGGSIRIPAGF 178
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
G++G++PS+G VS+ G LP S+S D G L R+ R H L + I
Sbjct: 179 NGVVGFKPSYGRVSLEGALPLSRSTDHAGPLTRSV----RDAHFLTE------------I 222
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
A + L V V ++ L G E + ++P+L+ + + P
Sbjct: 223 LAGESIPLEGVQN----PVFGVPLDFLEGRLGVEVRKAFTRLLEDLPALRAEVREVSLP- 277
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
L+ + V L RYE I+E+ +K V E +L + T+ + +
Sbjct: 278 -----LEGVYEVYTRLVRYEAARIHEKALKEHPEGFSPQVREALLAGLALTEKDYRDAVA 332
Query: 370 VRNEMRAALQRLLKDDKILVIPT--VSDPPLKLNTKKTYSAEFHDRT--LVLSSIGSMSG 425
R +R L + L+ L++P + PPL + S R + L+ S+ G
Sbjct: 333 EREALRLELVKALRGVDALLLPVQPLPAPPLGTEEVELESGRKGHREAFITLTLPFSLLG 392
Query: 426 CCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+A+P K P+ + + +G D +L
Sbjct: 393 VPTLALPFAKVEGMPVGLQVVGAYGEDGKVL 423
>gi|260554862|ref|ZP_05827083.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii ATCC 19606 = CIP 70.34]
gi|260411404|gb|EEX04701.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii ATCC 19606 = CIP 70.34]
gi|452947711|gb|EME53198.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acinetobacter
baumannii MSP4-16]
Length = 369
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 190/398 (47%), Gaps = 49/398 (12%)
Query: 76 LKFAIKDVFDVKGYVTGFGSP---DWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
+K +KD D++G T GS + + H +AE VV +LK IGKT L E A
Sbjct: 15 IKVMVKDTIDIQGLKTIAGSRALLEVEPAHDDAE----VVKNILKADCEIIGKTNLHELA 70
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
FGITG N +GTP+NP+ P IPGGSSSGSA AVAA+ DF LGTDT G +R+PA+ CG+
Sbjct: 71 FGITGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGV 130
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G +P+ G VS GV P S SLD VG A + ++ + ++ D
Sbjct: 131 FGLKPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKAMQII-----------------D 173
Query: 253 DIF---QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
F + ++ PKL ++V + + YQ + N+ +
Sbjct: 174 PTFKPAECTRTPKLALLNVKADEVVWNCIYQALQKANLETVLEK---------------- 217
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
+A + + YE + E ++ +G +V R+L+A +TT + +K
Sbjct: 218 --VEHFEAAYDAGMQIINYENWQAFGELTQTG--LIGSDVNNRLLKAAHTTLEQVKQAEV 273
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
V+ ++ L LL+ LV+PT+ P K++ + A + LV ++SG +
Sbjct: 274 VKAQLTQELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPF--NLSGHPAI 331
Query: 430 AIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
++P+ P+ + F++ H D+ L D++Q
Sbjct: 332 SVPLETSEGLPVGLQFVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|421664600|ref|ZP_16104738.1| amidase [Acinetobacter baumannii OIFC110]
gi|421696747|ref|ZP_16136328.1| amidase [Acinetobacter baumannii WC-692]
gi|404560820|gb|EKA66058.1| amidase [Acinetobacter baumannii WC-692]
gi|408712104|gb|EKL57292.1| amidase [Acinetobacter baumannii OIFC110]
Length = 369
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 121/398 (30%), Positives = 188/398 (47%), Gaps = 49/398 (12%)
Query: 76 LKFAIKDVFDVKGYVTGFGSP---DWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LK +KD D++G T GS + + H +AE VV +LK IGKT L E A
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSKALLEVEPAHDDAE----VVKNILKADCEIIGKTNLHELA 70
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
FGITG N +GTP+NP+ P IPGGSSSGSA AVAA+ DF LGTDT G +R+PA+ CG+
Sbjct: 71 FGITGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGV 130
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G +P+ G VS GV P S SLD VG A + ++ + ++ D
Sbjct: 131 FGLKPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKAMQII-----------------D 173
Query: 253 DIF---QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
F + ++ PKL ++V + + YQ + N+ +
Sbjct: 174 PTFKPAECTRTPKLALLNVKADEVVWNCIYQALQKANLETVLEK---------------- 217
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
+A + + YE + E ++ +G +V R+L+A TT + +K
Sbjct: 218 --VEHFEAAYDAGMQIINYENWQAFGELTQTG--LIGSDVNNRLLKAAATTLEQVKQAEV 273
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
VR ++ L LL+ LV+PT+ P K++ + A + LV ++SG +
Sbjct: 274 VRTQLTQELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPF--NLSGHPAI 331
Query: 430 AIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
++P+ P+ + ++ H D+ L D++Q
Sbjct: 332 SVPLETSEGLPVGLQIVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|167033221|ref|YP_001668452.1| amidase [Pseudomonas putida GB-1]
gi|166859709|gb|ABY98116.1| Amidase [Pseudomonas putida GB-1]
Length = 379
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 135/398 (33%), Positives = 183/398 (45%), Gaps = 49/398 (12%)
Query: 74 AGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAF 133
+G + AIKD DV G T S D A R A VV+ LL GA K L E AF
Sbjct: 15 SGPRVAIKDTIDVAGTAT-RASSQALEDAPLAVRHAEVVSHLLAAGARLTAKVGLHELAF 73
Query: 134 GITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGIL 193
G TG N+H GT NP+ P IPGGSSSGSA AVAA LVDF+LGTDT G VRVPA CG+
Sbjct: 74 GTTGINRHTGTAANPRFPGRIPGGSSSGSAAAVAAGLVDFSLGTDTGGSVRVPACCCGVF 133
Query: 194 GYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADD 253
G +P+ G VS GV+P S SLD VG A A P R + D
Sbjct: 134 GLKPTFGRVSRQGVMPASSSLDCVGPFA-----------------ASLPMLVRAMAMIDP 176
Query: 254 IFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTA 313
F ++VP I V+ E VG + A ++G + S P G
Sbjct: 177 TFVPAQVPAKARIGVLRVTAE------------VGIHKA-----VQGALSASGLPL-GNV 218
Query: 314 TLK----ALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
LK A + M+ + R F+ +++ K +G ++ R+ A T +
Sbjct: 219 ELKHFGAAYEAGMVVINRETFQAC-GHLLETGK--VGSDIAGRLAAAGQTHDAALAEAEA 275
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
VR + + L +L +PT+ D PL+L A +LV ++SG +
Sbjct: 276 VRQRFTEEVDQALARYDVLALPTMPDFPLRLEEASDTRAVLGMTSLVRPF--NLSGHPAL 333
Query: 430 AIPIGKYNEHPISISFITYHGGDKFLLDT----VLDLY 463
+IP+G P+ + + G D+ LL +L+LY
Sbjct: 334 SIPLGSEAGLPVGLQLVGAKGADEKLLAVAERLLLNLY 371
>gi|46199748|ref|YP_005415.1| amidase [Thermus thermophilus HB27]
gi|46197374|gb|AAS81788.1| amidase/amidotransferase [Thermus thermophilus HB27]
Length = 434
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 118/391 (30%), Positives = 173/391 (44%), Gaps = 33/391 (8%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R PL GL +KD+F VKG T G+ K A V L + GA KT +
Sbjct: 62 RGPLHGLPLTVKDLFPVKGMPTRAGT---KAPLPPLPEEARAVRRLREAGALLFAKTNMH 118
Query: 130 EFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
E A GITGEN G N PS GGSS GSAVAVA + +LGTDT G +R+PA F
Sbjct: 119 EIALGITGENPWTGPVRNAVDPSRQAGGSSGGSAVAVALGIGLASLGTDTGGSIRIPAGF 178
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
G++G++PS+G VS+ G LP S+S D G L R+ R H L + I
Sbjct: 179 NGVVGFKPSYGRVSLEGALPLSRSTDHAGPLTRSV----RDAHFLTE------------I 222
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
A + L V V ++ L G E + ++P+L+ + + P
Sbjct: 223 LAGESIPLEGVQN----PVFGVPLDFLEGRLGVEVRKAFTRLLEDLPALRAEVREVSLP- 277
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
L+ + V L RYE I+E+ +K V E +L + T+ + +
Sbjct: 278 -----LEGVYEVYTRLVRYEAARIHEKALKEHPEGFSPQVREALLAGLALTEKDYRDAVA 332
Query: 370 VRNEMRAALQRLLKDDKILVIPT--VSDPPLKLNTKKTYSAEFHDRT--LVLSSIGSMSG 425
R +R L + L+ L++P + PPL + S R + L+ S+ G
Sbjct: 333 EREALRLELVKALRGVDALLLPVHPLPAPPLGTEEVELESGRKGHREAFITLTLPFSLLG 392
Query: 426 CCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+A+P K P+ + + +G D +L
Sbjct: 393 VPTLALPFAKVEGMPVGLQVVGAYGEDGKVL 423
>gi|26553663|ref|NP_757597.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycoplasma
penetrans HF-2]
gi|26453669|dbj|BAC44001.1| glutamyl-tRNA amidotransferase subunit A [Mycoplasma penetrans
HF-2]
Length = 467
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 120/421 (28%), Positives = 199/421 (47%), Gaps = 24/421 (5%)
Query: 51 AFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAV 110
A+L E + P + L + +A+KD +V+ +T GS + +++++ TA
Sbjct: 40 AYLNLVENYQYATDNP---KSQLNKILYAVKDNINVRDTITTGGSLFF--ENYKSTYTAT 94
Query: 111 VVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQL 170
VV LL K GA I K+ LDEF G TG YG +NP + I GGSSSGSAV VA +L
Sbjct: 95 VVKLLDKAGAIPICKSNLDEFGLGGTGLFSAYGDVLNPFDETRIAGGSSSGSAVLVAKKL 154
Query: 171 VDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRV 230
V FALGTDT +R+PASF G+ GY+P++G VS GV P S S+D VG+ A + + V
Sbjct: 155 VTFALGTDTGDSIRMPASFLGVYGYKPTYGLVSRFGVFPYSPSIDHVGVFANSVDDVAIV 214
Query: 231 GHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQY 290
+ Q ++ + + I D + +L K+ K + ++ ++ L + N
Sbjct: 215 MDTINQHDSND--FTSQDIKLDFLIELDKIDKKAKLVTLTNVVDLLGKEEKELFTNTLNK 272
Query: 291 IASNVPSLKG-----------LRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVK 339
I+ +G + + S + + ++ + ++ + KT E+ +
Sbjct: 273 ISKEFKINEGSLSTDLIHLVPVVYEILSYSEAVSCYQNITGIPFG-KKGKGKTFEEKIID 331
Query: 340 SAKPRLGYNVFER-VLEAINTTQDNIKILY---KVRNEMRAALQRLLKDDKILVIPTVSD 395
+ G + R VL + T ++N ++L K+R + ++ L K +++P S
Sbjct: 332 ARTKNFGKELKRRFVLGSFVTLKENEELLLKCKKIRRLIVDKVEELFKKYDYIIMPGASS 391
Query: 396 PPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFL 455
K++ K + D L I + G + IP+GK PI I+ + D L
Sbjct: 392 IAPKVSDVKNNKTKPSDVDNYL-QIANFGGFPSLTIPMGKIKNMPIGINIMGKINSDNKL 450
Query: 456 L 456
L
Sbjct: 451 L 451
>gi|146339595|ref|YP_001204643.1| amidase [Bradyrhizobium sp. ORS 278]
gi|146192401|emb|CAL76406.1| Putative Glu-tRNA amidotransferase [Bradyrhizobium sp. ORS 278]
Length = 450
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 123/403 (30%), Positives = 194/403 (48%), Gaps = 43/403 (10%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA AG+ +IKD+FD+KG VT GS + D AE A V L K G IG+T
Sbjct: 67 AAPSAFAGIPVSIKDLFDIKGQVTRAGSRALE-DSAPAEADAPAVARLRKAGFVVIGRTN 125
Query: 128 LDEFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
+ EFA+ G N HYGTP + + ++PGGSSSG+AV+VA ++ ALGTDT G R+
Sbjct: 126 MTEFAYSGIGINPHYGTPKSAWKREVGYVPGGSSSGAAVSVADRMAYGALGTDTGGSCRI 185
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL----LQLNAVE 241
PA+F GI GY+P+ V + G +P S +LD+ G LA + + VL ++ A
Sbjct: 186 PAAFNGITGYKPTQARVPLDGGVPLSSTLDSFGPLANTVACCAVLDSVLADEPIRPLASR 245
Query: 242 PRRARRL-----IFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVP 296
P + RL I D++ + + +++ + + PE ++VG V
Sbjct: 246 PVKGLRLAVPTTIVLDELDAEVAETFERALDTLARQGALIERIEFPEFLDVG------VI 299
Query: 297 SLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEA 356
+KG A + S A +L+ + +Y+ PR+ + EA
Sbjct: 300 GMKGGFAAAES--------YAWHRFLLTAK----GDVYD-------PRVSVRILRG--EA 338
Query: 357 INTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHD--RT 414
I T D I++L R+ + A R+ D LV+PT ++ P K+ +A + R
Sbjct: 339 I-TVPDYIEMLNARRSLVTRAAARIAPYDA-LVMPTTANAPPKIADLADDAAFARENIRA 396
Query: 415 LVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
L + +M C +++P ++ E P+ + G D+ LL+
Sbjct: 397 LRNCTFINMIDGCAISLPAHRHGEVPVGLMLAQSGGNDRKLLE 439
>gi|94310865|ref|YP_584075.1| amidase [Cupriavidus metallidurans CH34]
gi|93354717|gb|ABF08806.1| amidase [Cupriavidus metallidurans CH34]
Length = 440
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 124/397 (31%), Positives = 175/397 (44%), Gaps = 48/397 (12%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAGL +IKD+FDV+G VT GS A+ + V L GA IG+T + EF
Sbjct: 69 PLAGLPISIKDLFDVRGQVTRAGSKALD-GGAPAQADSPAVARLRAAGAVLIGRTNMSEF 127
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
AF G N HYGTP P P + GGS+SG AV+VA + ALGTDT G +R+P++FCG
Sbjct: 128 AFSGLGLNPHYGTPRTPFDPERVAGGSTSGGAVSVAEDMAVAALGTDTGGSIRIPSAFCG 187
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL----LQLNAVEPRRARR 247
+ G++P+ V + G +P S SLD+ G LAR+ + + VL L A + R R
Sbjct: 188 LTGFKPTARRVPLDGAVPLSTSLDSAGPLARSVACCVAMDAVLSGETLDTRAAD-LRGLR 246
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
D P++ A+ LS + + P L+ L
Sbjct: 247 FYVTRDFVCDGLDPEVA--QTFEAALARLSAQG-------ATIVPFDFPELRRL------ 291
Query: 308 PE-NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKI 366
PE NG L A S W ++ G +RV + I +
Sbjct: 292 PEINGGGGLTAAES--------------WAWHRTLLAAKGDQYDQRVAQRIRRGEKQSAA 337
Query: 367 LYKVRNEMRAALQR----LLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVL---SS 419
Y R A+Q+ LL+D ++PTV+ P +L+ + F LVL S
Sbjct: 338 DYIDLLAARCAMQQRAAVLLRDADAWLMPTVAVRPPRLDALERDEDFFAVNGLVLRNASV 397
Query: 420 IGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
I + GC +P G+ I + HG D +L
Sbjct: 398 INFLDGCAAT-LPAGEG----IGLGVCGLHGSDARVL 429
>gi|399019362|ref|ZP_10721510.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. CF444]
gi|398097972|gb|EJL88265.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. CF444]
Length = 450
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 185/415 (44%), Gaps = 46/415 (11%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R P+ GL +IKD+FDV G T GS R + A +AVVV L+ GA +G+T +
Sbjct: 66 RSPIEGLPVSIKDLFDVAGETTLAGSVAL-RGYPAATESAVVVKRLIAAGAVIVGRTNMT 124
Query: 130 EFAFGITGENKHYGTPVNPQM----PSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
EFA+ G N HYGTP NP IPGGSSSG+A++V + +G+DT G +R+
Sbjct: 125 EFAYSGLGINPHYGTPRNPWQREVDGGRIPGGSSSGAAISVTDGMAVAGVGSDTGGSIRI 184
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAV----E 241
PA+FCGI G++P+ V M GVLP S++LD++G +A + VL V
Sbjct: 185 PAAFCGITGFKPTARRVPMQGVLPLSENLDSIGAMAPTVLCCAMMDAVLAGEEFVAPVAH 244
Query: 242 PRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKG- 300
P R RL++ +V+ ++ EH+ G A S G
Sbjct: 245 PLRGLRLLY--------------PTNVVRDGMD--------EHVAAGMQAAIAKLSAAGA 282
Query: 301 -LRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAIN- 358
+ Q N A + A + E + + + K V R+L +
Sbjct: 283 VIVEQDIPAFNELAAINAKGGFTAA----EAWAWHRQLIAERKDHYDQRVVSRILRGKDM 338
Query: 359 TTQDNIKILYKVRNEMRAALQRLLKDDKILV--IPTVSDPPLKLNTKKTYSAEFHDRTLV 416
+ D + +L+ R + Q+L D +L+ +P V+ L T A + L+
Sbjct: 339 SAADLLDVLHGRRRWIAKVEQQLAGYDALLMPTVPIVAPKIADLQTGD--DAYYAANGLI 396
Query: 417 LSS---IGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQE 468
L + + + GC V++P P+ +S G D LL L + L++
Sbjct: 397 LRNPTLVNFLDGCA-VSLPCHAAGTAPVGLSLAAAGGNDHRLLSIALAVETLLKQ 450
>gi|184158296|ref|YP_001846635.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii ACICU]
gi|332875666|ref|ZP_08443477.1| Amidase [Acinetobacter baumannii 6014059]
gi|384132404|ref|YP_005515016.1| Glu-tRNA amidotransferase [Acinetobacter baumannii 1656-2]
gi|384143403|ref|YP_005526113.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acinetobacter
baumannii MDR-ZJ06]
gi|385237733|ref|YP_005799072.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acinetobacter
baumannii TCDC-AB0715]
gi|387123750|ref|YP_006289632.1| amidase [Acinetobacter baumannii MDR-TJ]
gi|407933002|ref|YP_006848645.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acinetobacter
baumannii TYTH-1]
gi|416148268|ref|ZP_11602259.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii AB210]
gi|417568395|ref|ZP_12219258.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii OIFC189]
gi|417577859|ref|ZP_12228696.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii Naval-17]
gi|417871639|ref|ZP_12516569.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii ABNIH1]
gi|417873616|ref|ZP_12518483.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii ABNIH2]
gi|417878107|ref|ZP_12522739.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii ABNIH3]
gi|417883870|ref|ZP_12528080.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii ABNIH4]
gi|421204226|ref|ZP_15661355.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii AC12]
gi|421534365|ref|ZP_15980638.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii AC30]
gi|421629130|ref|ZP_16069873.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii OIFC180]
gi|421688851|ref|ZP_16128546.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii IS-143]
gi|421703775|ref|ZP_16143232.1| Glu-tRNA amidotransferase [Acinetobacter baumannii ZWS1122]
gi|421707558|ref|ZP_16146950.1| Glu-tRNA amidotransferase [Acinetobacter baumannii ZWS1219]
gi|421790568|ref|ZP_16226769.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii Naval-2]
gi|424052179|ref|ZP_17789711.1| hypothetical protein W9G_00868 [Acinetobacter baumannii Ab11111]
gi|424063678|ref|ZP_17801163.1| hypothetical protein W9M_00961 [Acinetobacter baumannii Ab44444]
gi|425752895|ref|ZP_18870794.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii Naval-113]
gi|445474976|ref|ZP_21453232.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii Naval-78]
gi|183209890|gb|ACC57288.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii ACICU]
gi|322508624|gb|ADX04078.1| Glu-tRNA amidotransferase [Acinetobacter baumannii 1656-2]
gi|323518233|gb|ADX92614.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii TCDC-AB0715]
gi|332736144|gb|EGJ67160.1| Amidase [Acinetobacter baumannii 6014059]
gi|333365041|gb|EGK47055.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii AB210]
gi|342224815|gb|EGT89831.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii ABNIH1]
gi|342230814|gb|EGT95638.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii ABNIH2]
gi|342233699|gb|EGT98411.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii ABNIH3]
gi|342234968|gb|EGT99597.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii ABNIH4]
gi|347593896|gb|AEP06617.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii MDR-ZJ06]
gi|385878242|gb|AFI95337.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Acinetobacter baumannii MDR-TJ]
gi|395554690|gb|EJG20692.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii OIFC189]
gi|395568556|gb|EJG29226.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii Naval-17]
gi|398326386|gb|EJN42535.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii AC12]
gi|404559690|gb|EKA64942.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii IS-143]
gi|404671629|gb|EKB39471.1| hypothetical protein W9G_00868 [Acinetobacter baumannii Ab11111]
gi|404674036|gb|EKB41801.1| hypothetical protein W9M_00961 [Acinetobacter baumannii Ab44444]
gi|407191596|gb|EKE62792.1| Glu-tRNA amidotransferase [Acinetobacter baumannii ZWS1122]
gi|407191939|gb|EKE63127.1| Glu-tRNA amidotransferase [Acinetobacter baumannii ZWS1219]
gi|407901583|gb|AFU38414.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii TYTH-1]
gi|408703273|gb|EKL48672.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii OIFC180]
gi|409987570|gb|EKO43750.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
baumannii AC30]
gi|410405628|gb|EKP57664.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii Naval-2]
gi|425498545|gb|EKU64619.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii Naval-113]
gi|444779577|gb|ELX03559.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii Naval-78]
Length = 369
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 188/398 (47%), Gaps = 49/398 (12%)
Query: 76 LKFAIKDVFDVKGYVTGFGSP---DWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LK +KD D++G T GS + + H +AE VV +LK IGKT L E A
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSKALLEVEPAHDDAE----VVKNILKADCEIIGKTNLHELA 70
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
FGITG N +GTP+NP+ P IPGGSSSGSA AVAA+ DF LGTDT G +R+PA+ CG+
Sbjct: 71 FGITGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGV 130
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G +P+ G VS GV P S SLD VG A + ++ + ++ D
Sbjct: 131 FGLKPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKAMQII-----------------D 173
Query: 253 DIF---QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
F + ++ PKL ++V + + YQ + N+ +
Sbjct: 174 PTFKPAECTRTPKLALLNVKADEVVWNCIYQALQKANLETVLEK---------------- 217
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
+A + + YE + E ++ +G +V R+L+A TT + +K
Sbjct: 218 --VEHFEAAYDAGMQIINYENWQAFGELTQTG--LIGSDVNNRLLKAAQTTLEQVKQAEV 273
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
V+ ++ L LL+ LV+PT+ P K++ + A + LV ++SG +
Sbjct: 274 VKAQLTEELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPF--NLSGHPAI 331
Query: 430 AIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
++P+ P+ + ++ H D+ L D++Q
Sbjct: 332 SVPLETSEGLPVGLQIVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|222106852|ref|YP_002547643.1| hypothetical protein Avi_5886 [Agrobacterium vitis S4]
gi|221738031|gb|ACM38927.1| glutamyl-tRNA amidotransferase subunit A [Agrobacterium vitis S4]
Length = 459
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 108/190 (56%), Gaps = 7/190 (3%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ A KD+FD+KG T GS D A R A VV L G IG+ + EF
Sbjct: 76 PLDGIPIAWKDLFDLKGVTTTAGSVVLD-DQPPASRDADVVAALASAGMVSIGQVNMSEF 134
Query: 132 AFGITGENKHYGTPVNPQM--PSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
AF G N HYGTP NP + +PGGSSSGSAVAVAA LV ++GTDT G VR+P++F
Sbjct: 135 AFSGLGVNPHYGTPRNPHGVGEARVPGGSSSGSAVAVAAGLVPVSIGTDTGGSVRIPSAF 194
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRA---- 245
GI+GY+ + G SM GV P S+SLD++G L R V + L + RA
Sbjct: 195 NGIVGYKATRGRYSMRGVFPLSKSLDSLGPLCRTVQDAVWVDAAMRGLTHPQVTRAALAG 254
Query: 246 RRLIFADDIF 255
RR + + +F
Sbjct: 255 RRFVVPETVF 264
>gi|445429699|ref|ZP_21438292.1| amidase [Acinetobacter baumannii OIFC021]
gi|444761137|gb|ELW85554.1| amidase [Acinetobacter baumannii OIFC021]
Length = 369
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 188/395 (47%), Gaps = 43/395 (10%)
Query: 76 LKFAIKDVFDVKGYVTGFGSP---DWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LK +KD D++G T GS + + H +AE VV +LK IGKT L E A
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSKALLEVEPAHDDAE----VVKNILKADCEIIGKTNLHELA 70
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
FGITG N +GTP+NP+ P IPGGSSSGSA AVAA+ DF LGTDT G +R+PA+ CG+
Sbjct: 71 FGITGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGV 130
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G +P+ G VS GV P S SLD VG A + ++ + + ++P R
Sbjct: 131 YGLKPTFGRVSRKGVYPPSSSLDCVGPFANSVEMIEKAMQI------IDPTFKRA----- 179
Query: 253 DIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGT 312
+ ++ PKL + V + + YQ + N+ +
Sbjct: 180 ---ECTRTPKLAVLDVKADEVVWNCIYQALQKANLETVLEK------------------V 218
Query: 313 ATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRN 372
+A + + YE + E ++ +G +V R+L+A +TT + +K V+
Sbjct: 219 EHFEAAYDAGMQIINYENWQAFGELTQTG--LIGSDVNNRLLKAAHTTLEQVKQAEVVKA 276
Query: 373 EMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIP 432
++ L LL L++PT+ P K++ + A + LV ++SG +++P
Sbjct: 277 QLTQELDALLDKYDALILPTLPQIPPKVSEAENTVAFLNLTGLVRPF--NLSGHPAISVP 334
Query: 433 IGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
+ P+ + ++ H D+ L D++Q
Sbjct: 335 LETSEGLPVGLQIVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|424875055|ref|ZP_18298717.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. viciae WSM1455]
gi|393170756|gb|EJC70803.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. viciae WSM1455]
Length = 483
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 122/404 (30%), Positives = 189/404 (46%), Gaps = 46/404 (11%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A KD+FD++G T GS ++ A+ A VV LL + G +G+T + EFA
Sbjct: 99 LDGIPIAWKDLFDIEGLPTTAGSVVLAKEM-PAKCDAAVVALLRQAGMVAVGRTNMSEFA 157
Query: 133 FGITGENKHYGTPVNPQ---MPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
F G N HYGTPVNP+ +P IPGGSSSG+ V VAA LV A+GTDT G VR+PA+F
Sbjct: 158 FSGLGINPHYGTPVNPRGTDLP-RIPGGSSSGAGVVVAAGLVPVAMGTDTGGSVRIPAAF 216
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
GI+GY+ + G +M GV P ++SLD++G L R+ +AV A R +
Sbjct: 217 NGIVGYKATRGRHAMAGVYPLAKSLDSLGPLCRSVR------------DAVWIDAAMRGL 264
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGL--RAQSTS 307
A D+ L+ + VI PE+ A V + + R Q
Sbjct: 265 TAPDV----ATHPLQGLEVIV-----------PENTVFDGAEAGVVAAFEAALGRLQRAG 309
Query: 308 PENGTATLKALSSVMLSLQRY-------EFKTIYEEWVKSAKPRLGYNVFERVLEAINTT 360
+ + A + + + RY F E + + V R TT
Sbjct: 310 AKVTRTVILAFNEIFDLMTRYGPLVTAEAFALHRERLAGPDADSMDHRVVMRTRLGSKTT 369
Query: 361 QDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSD--PPL-KLNTKKTYSAEFHDRTLVL 417
+ + + R+ + A ++RL+ ++++ PTV+ PP+ L +++TL
Sbjct: 370 LPDYLAILEARSRLIADVERLVG-NRLIAFPTVAHVAPPIGPLEQDDELFFATNNKTLRN 428
Query: 418 SSIGSMSGCCQVAIPIGKYN-EHPISISFITYHGGDKFLLDTVL 460
+++G+ C V+IP G + P+ + D+ LL L
Sbjct: 429 TALGNFLDWCGVSIPCGTGEADMPVGLLLSATPHRDEALLGIAL 472
>gi|445474084|ref|ZP_21453129.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii OIFC338]
gi|444768353|gb|ELW92569.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii OIFC338]
Length = 369
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 188/398 (47%), Gaps = 49/398 (12%)
Query: 76 LKFAIKDVFDVKGYVTGFGSP---DWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LK +KD D++G T GS + + H +AE VV +LK IGKT L E A
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSKALLEVEPAHDDAE----VVKNILKADCEIIGKTNLHELA 70
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
FGITG N +GTP+NP+ P IPGGSSSGSA AVAA+ DF LGTDT G +R+PA+ CG+
Sbjct: 71 FGITGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGV 130
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G +P+ G VS GV P S SLD VG A + ++ + ++ D
Sbjct: 131 FGLKPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKAMQII-----------------D 173
Query: 253 DIF---QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
F + ++ PKL ++V + + YQ + N+ +
Sbjct: 174 PTFKPAECTRTPKLALLNVKADEVVWNCIYQALQKANLETVLEK---------------- 217
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
+A + + YE + E ++ +G +V R+L+A TT + +K
Sbjct: 218 --VEHFEAAYDAGMQIINYENWQAFGELTQTG--LIGSDVNNRLLKAAQTTLEQVKQAEV 273
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
V+ ++ L LL+ LV+PT+ P K++ + A + LV ++SG +
Sbjct: 274 VKAQLTEELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPF--NLSGHPAI 331
Query: 430 AIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
++P+ P+ + ++ H D+ L D++Q
Sbjct: 332 SVPLETSEGLPVGLQIVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|417002180|ref|ZP_11941569.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Anaerococcus prevotii ACS-065-V-Col13]
gi|325479321|gb|EGC82417.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Anaerococcus prevotii ACS-065-V-Col13]
Length = 470
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 174/354 (49%), Gaps = 38/354 (10%)
Query: 108 TAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVA 167
A VV L+K A + K+ +DEFA G GE+ ++G NP S PGGSSSGSAVAVA
Sbjct: 97 NATVVENLIKEDAIIVAKSNMDEFAMGGRGESSYFGPTKNPLDESRAPGGSSSGSAVAVA 156
Query: 168 AQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASIL 227
V +LGTDT G VR PAS+C I+GY+P++ +S GV+ + +LD V L A+N + +
Sbjct: 157 KDDVLISLGTDTGGSVRCPASYCNIIGYKPTYSLMSRSGVVSMANTLDQVSLFAKNIADI 216
Query: 228 HRVGHVLLQLNAVEPRRARRLI------FADDIFQLSKVPKLKTIHVISKAIESLSGYQN 281
+ + ++ +P+ ++ + D F+ K+ + T + K IE G
Sbjct: 217 RVLANT---TSSPDPKDMTSILENYDYKYEDYDFKGKKIGYINTSSNLYKGIEDTVGKDY 273
Query: 282 PEHMNVGQYIASNVPSLKGLRAQSTSP-------ENGTATLKALSSVMLSLQRYEFKTIY 334
+ +N + + + + +K A+ +P ++ + V Q +++ +
Sbjct: 274 EKALNQLKELGAELEEVKLEYAKYANPVYNVVMNSEVSSNMSRFDGVRFGYQADKYENVE 333
Query: 335 EEWVKSAKPRLGYNVFERVLEAINT----TQDNIKIL---YKVRNEMRAALQRLLKDDKI 387
E +VKS LG V R+ A+ T D+ KI K+R+ ++ L+ L K
Sbjct: 334 ELFVKSRSEGLGEEVQRRI--ALGTMYLSANDDQKIYKKGLKIRSLIKNELEDLFKKYDF 391
Query: 388 LVIPTVSDPPLKLNTKKTYSAEFHD------RTLVLSSIGSMSGCCQVAIPIGK 435
++ PT ++ KL E +D R+ + I +++G C +++P+ K
Sbjct: 392 IITPTTTNLAPKL-------GEANDDPLSDFRSDGFNVIVNLAGMCGISLPVRK 438
>gi|197335992|ref|YP_002156298.1| amidase [Vibrio fischeri MJ11]
gi|197317482|gb|ACH66929.1| amidase, putative [Vibrio fischeri MJ11]
Length = 387
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 181/386 (46%), Gaps = 33/386 (8%)
Query: 77 KFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGIT 136
KF + D D+K G G+P W + +A A V L+LK GA +GKT +DEF FG+
Sbjct: 27 KFVVSDCIDIKNTPNGQGNPTWLLEQRKARENAPAVDLILKKGAIFVGKTQMDEFGFGLH 86
Query: 137 GENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYR 196
G N HY N GGSSSG+ AV D LG D G +RVPA + G+ G++
Sbjct: 87 GHNPHYAPIPNKNSEGRFIGGSSSGAVAAVVNGDADIGLGIDFGGGIRVPALYAGLYGFK 146
Query: 197 PSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIFQ 256
S V+M G+ ++ ++G +A+N S + +V VL ++ + R++ D +F
Sbjct: 147 ASASAVNMQGIDCIAKEDTSLGWVAKNLSDIRKVATVLTPMSPL--VTVERIVVLDSLF- 203
Query: 257 LSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTATLK 316
+ +P+ + + + + S Y+ ++ + I + A+S + T L+
Sbjct: 204 -ADIPEEAKTKL--ETLITSSPYEIVRSKSISKIITTKA-------AESFKVLSATRGLR 253
Query: 317 ALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNEMRA 376
L E W + K +G + ++ + + +I + R + +
Sbjct: 254 NL----------------ELWYEKNKAAVGNEIKMQMKWLASLKYKDERIALEQRELVIS 297
Query: 377 ALQRLLKDDKILVIPTVSD--PPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIG 434
L+ +L + +L++PT ++ PP+ ++ Y + + + L +S+ S++ Q+ +P
Sbjct: 298 VLESILDEKILLLMPTTANIAPPITATDEQLY--KLNAQILKYTSLASLADLPQLHLPWF 355
Query: 435 KYNEHPISISFITYHGGDKFLLDTVL 460
N+ P IS + G D+ L+D +
Sbjct: 356 TVNDSPWGISLVGQKGMDRQLIDVAI 381
>gi|306841125|ref|ZP_07473843.1| amidase [Brucella sp. BO2]
gi|306288846|gb|EFM60160.1| amidase [Brucella sp. BO2]
Length = 337
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 167/350 (47%), Gaps = 35/350 (10%)
Query: 115 LLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFA 174
LL GA IGK DE AF + G+N HY P+NP P + GGSSSGSA AVA +L D A
Sbjct: 4 LLAAGAEFIGKAQTDEVAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIA 63
Query: 175 LGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL 234
LG+DT G +R PASFCG++G R +HG + + G++P + SLDT+G AR+ ++ +VG VL
Sbjct: 64 LGSDTGGSIRTPASFCGLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAVL 123
Query: 235 LQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASN 294
L +A E F+L+++ + + + Y+ A
Sbjct: 124 LGDDAQE-------------FKLTQLLYMPVLEQLLLGQAETDAYR--------AMFAKV 162
Query: 295 VPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVL 354
P L+A S T ++ L +Q E + W+ S +LG + +R
Sbjct: 163 RPHFTNLKAASQP----TLSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFA 218
Query: 355 EAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSA--EFHD 412
T D +K R + ++ + +L +PTV P T + + A + +
Sbjct: 219 YGAEMTADMVKNQRARRARFAEEFEAIIGESAVLALPTV--PGAAPLTGEPFEALQAYRE 276
Query: 413 RTLVLSSIGSMSGCCQVAIPIGK------YNEHPISISFITYHGGDKFLL 456
+ L L + +SG Q+ +P+G ++ P ISFI G D+ L+
Sbjct: 277 QALRLLCLSGLSGLPQITLPLGSLRPGGTMHDAPFGISFIGPRGSDRTLI 326
>gi|293394591|ref|ZP_06638885.1| amidase [Serratia odorifera DSM 4582]
gi|291422900|gb|EFE96135.1| amidase [Serratia odorifera DSM 4582]
Length = 449
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 98/155 (63%), Gaps = 3/155 (1%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
A PL G+ +IKD+FDV G T GS D A+R A VV LL+ G +GKT +
Sbjct: 66 ALSPLDGVPVSIKDLFDVAGEATTGGSRVLT-DAAPAQRHAAVVARLLQAGVVIVGKTNM 124
Query: 129 DEFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
EFA+ G N HY TP NP + IPGGSSSG+AVAVA + A+G+DT G VR+P
Sbjct: 125 TEFAYSGLGINPHYATPANPWQRAARRIPGGSSSGAAVAVADGMGFGAIGSDTGGSVRIP 184
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLA 221
A+FCG+ GY+PS + M GV P S SLD+VG++A
Sbjct: 185 AAFCGLTGYKPSACRIDMAGVQPLSPSLDSVGVIA 219
>gi|398824037|ref|ZP_10582384.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Bradyrhizobium sp. YR681]
gi|398225271|gb|EJN11546.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Bradyrhizobium sp. YR681]
Length = 449
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 190/405 (46%), Gaps = 47/405 (11%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA AG+ +IKD+FD+KG VT GS D AE+ A V L K G IG+T
Sbjct: 66 AAPSRYAGIPVSIKDLFDIKGQVTRAGSRALD-DSPAAEQDAATVARLRKAGFVLIGRTN 124
Query: 128 LDEFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
+ EFA+ G N HYGTP + H+PGGSSSG+AV+V + LGTDT G R+
Sbjct: 125 MTEFAYSGIGINPHYGTPKGAWNRAEGHVPGGSSSGAAVSVFDGMAHGGLGTDTGGSCRI 184
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ--LNAVEPR 243
PA+F GI+GY+P+ V + G +P S SLD++G LAR+ S + VL + A++PR
Sbjct: 185 PAAFNGIVGYKPTQRRVPLDGAVPLSFSLDSIGPLARSVSCCAILDAVLANEPIVALKPR 244
Query: 244 RARRLIFA-------DDIFQLSKVPKLKTIHVISKAIESLSGYQN-PEHMNVGQYIASNV 295
+ + A DD+ + +A++SL+ + E + + ++
Sbjct: 245 PVKGMRLAVPTTIALDDL-------DAEVSETFERALKSLADHGAIIERIEMAEF----- 292
Query: 296 PSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLE 355
P N A S + RY + + + PR+ + +
Sbjct: 293 --------HDIGPMNAKGGFAASES--YAWHRYLITSKGDVY----DPRVSVRILRGEAQ 338
Query: 356 AINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLK---LNTKKTYSAEFHD 412
+ D I +L + R+ + R+ D LV+PT ++ P K L K ++ + +
Sbjct: 339 ---SAADYIDLLNERRSLIARVNARIAPYDA-LVLPTTANTPPKIADLADDKAFTTQ-NL 393
Query: 413 RTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
R L ++ +M+ C +++P + E P+ + G D+ + +
Sbjct: 394 RALRNCTLINMTDGCAISLPAHREGEIPVGLMLAGAGGSDRRIFE 438
>gi|452130268|ref|ZP_21942840.1| amidase [Bordetella holmesii H558]
gi|451920193|gb|EMD70339.1| amidase [Bordetella holmesii H558]
Length = 451
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 174/405 (42%), Gaps = 52/405 (12%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R P+ GL +IKD+FDV+G T GS + A + VV L+ GA +GKT +
Sbjct: 66 RSPIDGLPISIKDLFDVRGQTTMAGSIA-REGEPPATADSDVVCRLVAAGAVIVGKTNMS 124
Query: 130 EFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
EFA+ G N HYGTP NP + IPGGSSSG+AV+V + A+G+DT G VR+PA
Sbjct: 125 EFAYSGLGLNPHYGTPRNPWDRATGRIPGGSSSGAAVSVTDGMALAAIGSDTGGSVRIPA 184
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVE----PR 243
+ CG+ G++PS VSM G LP S SLD++G LA + + + VL A+ P
Sbjct: 185 ALCGLAGFKPSAWRVSMAGALPLSTSLDSIGPLASSVACCATLDAVLADDTALPADALPL 244
Query: 244 RARRLIF--------ADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNV 295
R RL DD + L T+ IE + +V
Sbjct: 245 RGLRLALPTAIVLDDVDDTVAQAFDAALSTLSAAGALIERI-----------------DV 287
Query: 296 PSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLE 355
P L AQ + TA+ E + + R V R+L
Sbjct: 288 PEFAQL-AQINAKGGFTAS--------------EAYAWHRSLLARKGDRYDPRVIARILR 332
Query: 356 AINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTL 415
+ T + L R A + + LV+PTV + + + F L
Sbjct: 333 GKDMTAADYIDLLSARQIWVAGVDARIAHYDALVLPTVPQVAPAIAPLEASNEAFTRMNL 392
Query: 416 VL----SSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+ + I + GC +++P E P+ + + +G D+ +L
Sbjct: 393 TMLRNCTLINFLDGCA-LSLPCQAPGEAPVGLMIASSNGNDRRVL 436
>gi|399010436|ref|ZP_10712809.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM17]
gi|398107159|gb|EJL97166.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM17]
Length = 386
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 126/402 (31%), Positives = 174/402 (43%), Gaps = 53/402 (13%)
Query: 75 GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFG 134
GL +KD D+ GY T S + D A A VV LL G GKT L E AFG
Sbjct: 30 GLSVMVKDTIDIAGYPT-RASSNALVDAPAAGEHAQVVRALLGAGCRITGKTSLHELAFG 88
Query: 135 ITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILG 194
TG N GT NP+ P +IPGGSSSGSA AVA L DFALGTDT G VR+PA+ CG+ G
Sbjct: 89 TTGLNAWTGTAANPRYPGYIPGGSSSGSAAAVAGGLCDFALGTDTGGSVRIPAACCGVFG 148
Query: 195 YRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDI 254
+P+ G +S GV+P +LD VG LAR+ RLI A I
Sbjct: 149 LKPTFGRISRQGVMPTHSTLDCVGPLARDMD---------------------RLIEAMGI 187
Query: 255 FQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTAT 314
+ P PEH+ +G ++ + Q+ G +
Sbjct: 188 IDPTFAP-----------------VPLPEHLAIGVVAVEVHEQIQAVVNQAL----GRSH 226
Query: 315 LKALSSVMLSLQRYEFKTI----YEEWVKSAK----PRLGYNVFERVLEAINTTQDNIKI 366
K L + + + E W R+G +V +R+ A TT ++
Sbjct: 227 FKLLEQTLPGMSAAYGAGMAIINAETWAACGHLLQTGRVGSDVADRLRAASLTTAKFVEE 286
Query: 367 LYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGC 426
R A + L IL +PT+ D PL++ A +LV + ++SG
Sbjct: 287 AEITRRAFTAEVDAALAITPILAMPTMPDFPLRVVDAADTRAALGMTSLVRAF--NLSGH 344
Query: 427 CQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQE 468
++IP+ + PI + I HG D+ L +L L+E
Sbjct: 345 PALSIPLESASGLPIGLQLIAAHGADELLCAVARELVRRLEE 386
>gi|421655592|ref|ZP_16095913.1| amidase [Acinetobacter baumannii Naval-72]
gi|408507897|gb|EKK09585.1| amidase [Acinetobacter baumannii Naval-72]
Length = 369
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 188/398 (47%), Gaps = 49/398 (12%)
Query: 76 LKFAIKDVFDVKGYVTGFGSP---DWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LK +KD D++G T GS + + H +AE VV +LK IGKT L E A
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSKALLEVEPAHDDAE----VVKNILKADCEIIGKTNLHELA 70
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
FGITG N +GTP+NP+ P IPGGSSSGSA AVAA+ DF LGTDT G +R+PA+ CG+
Sbjct: 71 FGITGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGV 130
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G +P+ G VS GV P S SLD VG A + ++ + ++ D
Sbjct: 131 FGLKPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKAMQII-----------------D 173
Query: 253 DIF---QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
F + ++ PKL ++V + + YQ + N+ +
Sbjct: 174 PTFKPAECTRTPKLALLNVKTDEVVWNCIYQALQKANLETVLEK---------------- 217
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
+A + + YE + E ++ +G +V R+L+A TT + +K
Sbjct: 218 --VEHFEAAYDAGMQIINYENWQAFGELTQTG--LIGSDVNNRLLKAAQTTLEQVKQAEV 273
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
V+ ++ L LL+ LV+PT+ P K++ + A + LV ++SG +
Sbjct: 274 VKAQLTEELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPF--NLSGHPAI 331
Query: 430 AIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
++P+ P+ + ++ H D+ L D++Q
Sbjct: 332 SVPLETSEGLPVGLQIVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|260905667|ref|ZP_05913989.1| Amidase [Brevibacterium linens BL2]
Length = 434
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 165/330 (50%), Gaps = 38/330 (11%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ FA+KDV DV G+ T GS + +A VV+LL + GA + KT E++
Sbjct: 49 LEGIPFAVKDVIDVAGFPTTMGSN--VSSGPDPSASAPVVSLLERAGALPVVKTNCQEYS 106
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+GI G+ +G +NP P+ GGSSSGSA VAA +V ALGTDT G VRVPA+ G+
Sbjct: 107 YGILGDESAFGRVINPVDPALCTGGSSSGSAALVAAGVVPLALGTDTAGSVRVPAACQGV 166
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
+G++P+ GTVS GV P S S DTVGL AR+ +L V + N + A
Sbjct: 167 IGFKPTFGTVSAEGVFPLSPSFDTVGLFARDLPLLTAAFRV-ISGNGADASPA------- 218
Query: 253 DIFQLSKVPKLKTIHVISKAIESLSGYQ--NPEHMNVGQYIASNVPSLKGLRAQSTSPEN 310
+ ++ P++ + +++ A ES +G + EH++ +A +TS
Sbjct: 219 -VSSPAETPRID-LSLLNAADESAAGVRAWASEHLS------------GSGKATTTS--- 261
Query: 311 GTATLKALSSVMLS-------LQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDN 363
A + L+ ++ ++RYE ++++++ + V+ ++L N T+
Sbjct: 262 --ANVDYLTELIERGIDFYDIVRRYEAYVLHKQFLDDQGEQYQPGVWAKILSGQNITEAE 319
Query: 364 IKILYKVRNEMRAALQRLLKDDKILVIPTV 393
+ E+RA + D ++ P +
Sbjct: 320 YQSNVASLEELRATAESFFDDVDFIITPAM 349
>gi|421786754|ref|ZP_16223141.1| amidase [Acinetobacter baumannii Naval-82]
gi|410410859|gb|EKP62748.1| amidase [Acinetobacter baumannii Naval-82]
Length = 369
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 189/398 (47%), Gaps = 49/398 (12%)
Query: 76 LKFAIKDVFDVKGYVTGFGSP---DWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
+K +KD D++G T GS + + H +AE VV +LK IGKT L E A
Sbjct: 15 IKVMVKDTIDIQGLKTIAGSRALLEVEPAHDDAE----VVKNILKADCEIIGKTNLHELA 70
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
FGITG N +GTP+NP+ P IPGGSSSGSA AVAA+ DF LGTDT G +R+PA+ CG+
Sbjct: 71 FGITGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGV 130
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G +P+ G VS GV P S SLD VG A + ++ + ++ D
Sbjct: 131 YGLKPTFGRVSRKGVYPPSSSLDCVGPFANSVEMIEKTMQII-----------------D 173
Query: 253 DIF---QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
F + ++ PKL + V + + YQ + N+ +
Sbjct: 174 PTFKPAECTRTPKLAVLDVKADEVVWNCIYQALQKANLETVLEK---------------- 217
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
+A + + YE + E ++ +G +V R+L+A +TT + +K
Sbjct: 218 --VEHFEAAYDAGMQIINYENWQAFGELTQTG--LIGSDVNNRLLKAAHTTLEQVKQAEV 273
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
V+ ++ L LL+ LV+PT+ P K++ + A + LV ++SG +
Sbjct: 274 VKAQLTQELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPF--NLSGHPAI 331
Query: 430 AIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
++P+ P+ + F++ H D+ L D++Q
Sbjct: 332 SVPLETSEGLPVGLQFVSKHQKDEQLCVIAKFCVDAMQ 369
>gi|122919913|pdb|2DC0|A Chain A, Crystal Structure Of Amidase
gi|122919914|pdb|2DC0|B Chain B, Crystal Structure Of Amidase
Length = 434
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 172/393 (43%), Gaps = 37/393 (9%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R PL GL +KD+F VKG T G+ K A V L + GA KT
Sbjct: 62 RGPLHGLPLTVKDLFPVKGMPTRAGT---KAPLPPLPEEARAVRRLREAGALLFAKTNXH 118
Query: 130 EFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
E A GITGEN G N PS GGSS GSAVAVA + +LGTDT G +R+PA F
Sbjct: 119 EIALGITGENPWTGPVRNAVDPSRQAGGSSGGSAVAVALGIGLASLGTDTGGSIRIPAGF 178
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
G++G++PS+G VS+ G LP S+S D G L R+ H
Sbjct: 179 NGVVGFKPSYGRVSLEGALPLSRSTDHAGPLTRSVRDAH--------------------- 217
Query: 250 FADDIFQLSKVPKLKTIH--VISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
F +I +P L+ + V ++ L G E + ++P+L+ + +
Sbjct: 218 FLTEILAGESIP-LEGVQNPVFGVPLDFLEGRLGVEVRKAFTRLLEDLPALRAEVREVSL 276
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
P L+ + V L RYE I+E+ +K V E +L + T+ + +
Sbjct: 277 P------LEGVYEVYTRLVRYEAARIHEKALKEHPEGFSPQVREALLAGLALTEKDYRDA 330
Query: 368 YKVRNEMRAALQRLLKDDKILVIPT--VSDPPLKLNTKKTYSAEFHDRT--LVLSSIGSM 423
R +R L + L+ L++P + PPL + S R + L+ S+
Sbjct: 331 VAEREALRLELVKALRGVDALLLPVQPLPAPPLGTEEVELESGRKGHREAFITLTLPFSL 390
Query: 424 SGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
G +A+P K P+ + + +G D +L
Sbjct: 391 LGVPTLALPFAKVEGXPVGLQVVGAYGEDGKVL 423
>gi|424059737|ref|ZP_17797228.1| hypothetical protein W9K_00851 [Acinetobacter baumannii Ab33333]
gi|404670475|gb|EKB38367.1| hypothetical protein W9K_00851 [Acinetobacter baumannii Ab33333]
Length = 369
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 121/398 (30%), Positives = 189/398 (47%), Gaps = 49/398 (12%)
Query: 76 LKFAIKDVFDVKGYVTGFGSP---DWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LK +KD D++G T GS + + H +AE VV +LK IGKT L E A
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSKALLEVEPAHDDAE----VVKNILKADCEIIGKTNLHELA 70
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
FGITG N +GTP+NP+ P IPGGSSSGSA AVAA+ DF LGTDT G +R+PA+ CG+
Sbjct: 71 FGITGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGV 130
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G +P+ G VS GV P S SLD VG A + ++ + ++ D
Sbjct: 131 YGLKPTFGRVSRKGVYPPSSSLDCVGPFANSVEMIEKAMQII-----------------D 173
Query: 253 DIF---QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
F + ++ PKL + V + + YQ + N+ +
Sbjct: 174 PTFKPAECTRTPKLAVLDVKADEVVWNCIYQALQKANLETVLEK---------------- 217
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
+A + + YE + E ++ +G +V R+L+A TT + +K
Sbjct: 218 --VEHFEAAYDAGMQIINYENWQAFGELTQTG--LIGSDVNGRLLKAAATTLEQVKQAEV 273
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
VR ++ L LL+ LV+PT+ P K++ + A F + T ++ ++SG +
Sbjct: 274 VRAQLTQELDALLEKYDALVLPTLPQIPPKVSEAENTVA-FLNLTALVRPF-NLSGHPAI 331
Query: 430 AIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
++P+ P+ + ++ H D+ L D++Q
Sbjct: 332 SVPLETSEGLPVGLQIVSKHQKDEQLCAIAKFCIDAMQ 369
>gi|422322042|ref|ZP_16403085.1| amidase [Achromobacter xylosoxidans C54]
gi|317403033|gb|EFV83570.1| amidase [Achromobacter xylosoxidans C54]
Length = 448
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/399 (28%), Positives = 177/399 (44%), Gaps = 40/399 (10%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R + GL +IKD+FDV+G T GS + A+ A VV L+ GA IG+T +
Sbjct: 66 RSAIEGLPISIKDLFDVEGETTMAGSVA-REGEPAADANAEVVQRLIAAGAVIIGRTNMT 124
Query: 130 EFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
EFA+ G N HYGTP+NP + IPGGSSSG+AV+VA + +G+DT G VR+PA
Sbjct: 125 EFAYSGLGINPHYGTPLNPWDRATGRIPGGSSSGAAVSVADGMAVAGIGSDTGGSVRIPA 184
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPR---- 243
+ CG+ G++PS VSM GVLP S +LD++G +A + + +L P
Sbjct: 185 ALCGLTGFKPSAWRVSMEGVLPLSANLDSIGPIAASVRCCAELDAILSGEGGPVPEALPL 244
Query: 244 RARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRA 303
R RL VP+ + + K +V A V LK A
Sbjct: 245 RGLRL----------AVPRTLALDGMDK--------------HVSDTFARAVARLK--EA 278
Query: 304 QSTSPENGTATLKALSSVML--SLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQ 361
+ E L+++ E + E + A R V R+L + +
Sbjct: 279 GALVDEIAIPEFAELANINAKGGFTAAEAWAWHRELIARAGKRYDPRVVSRILRGKDMSA 338
Query: 362 DNIKILYKVRNEMRAALQRLLKDDKILVIPTVSD-PPLKLNTKKTYSAEFHDRTLVLSS- 419
+ L R AA+ R + L++PT P + + + A + L+L +
Sbjct: 339 ADYLDLLDAREAWVAAVDRRIAGYDALIMPTTPIVAPAVADLQASDEAYYAANGLILRNP 398
Query: 420 --IGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
I + GC +++P P+ + +G D+ +L
Sbjct: 399 TLINFLDGCA-LSLPCHAAGTAPVGLMIAASNGADRRVL 436
>gi|21227329|ref|NP_633251.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methanosarcina
mazei Go1]
gi|23821593|sp|Q8PXJ1.1|GATA_METMA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|20905684|gb|AAM30923.1| Glutamyl-tRNA(Gln) amidotransferase, subunit A [Methanosarcina
mazei Go1]
Length = 476
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 128/418 (30%), Positives = 186/418 (44%), Gaps = 52/418 (12%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ AIKD V G GS + + A V+ LL GA +GKT +DEF
Sbjct: 61 PLAGVPIAIKDNISVVGLPNSCGSK--ILEGYVPPFNAHVIEKLLSAGAVILGKTNMDEF 118
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G + E H+G NP +PGGSS GSA VAA FALG+DT G VR PASFCG
Sbjct: 119 AMGSSTETSHFGPTANPWDLERVPGGSSGGSAAVVAAGEAPFALGSDTGGSVRCPASFCG 178
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
++G +P++G VS GV+ + SL+ VG LA N + VL+ + A RR I +
Sbjct: 179 VVGLKPTYGAVSRYGVVAYANSLEQVGPLANNVEDI----AVLMDVIAGYDRRDSTSIDS 234
Query: 252 DDIFQLSKVPKLKTIHV-ISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPEN 310
+Q + V +K + + + K + H +V + + + + L A T E
Sbjct: 235 KTEYQKALVDDVKGLKIGVPKEF-----FGEGIHPDVEKAVWDAIHKCESLGA--TWEEV 287
Query: 311 GTATLK---------ALSSVMLSL-----QRYEFKTIYEEW----VKSAKPRLGYNVFER 352
+K A+S +L RY F+ E W K+ G V R
Sbjct: 288 SMPHIKYALASYYIIAMSEASSNLARFDGTRYGFRAGGENWHAMVSKTRAEGFGTEVKRR 347
Query: 353 VLEAINTTQDNIKILY-----KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYS 407
+L Y KVR ++ + L +L+ PT+ +P K+ K
Sbjct: 348 ILLGTYALSAGYHDKYYLKALKVRTLVKQDFDKALSKVDLLMAPTMPNPAFKIGEK---- 403
Query: 408 AEFHD-RTLVLSSIGS----MSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVL 460
D TL LS I + ++G +++P G + PI + + G F +TVL
Sbjct: 404 --IEDPLTLYLSDINTCPINLAGVPSISVPCGFTDGLPIGLQIM----GKPFDEETVL 455
>gi|154245002|ref|YP_001415960.1| amidase [Xanthobacter autotrophicus Py2]
gi|154159087|gb|ABS66303.1| Amidase [Xanthobacter autotrophicus Py2]
Length = 369
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 125/383 (32%), Positives = 184/383 (48%), Gaps = 40/383 (10%)
Query: 75 GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFG 134
G + A+KD D+ G T GS D A A VV L G +GKT L E AFG
Sbjct: 14 GPRVAVKDTIDIAGEPTMAGSRALA-DAAPATEHAEVVARALAAGCRIVGKTTLHELAFG 72
Query: 135 ITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILG 194
+TG N GTP NP+ P +PGGSSSGSA AVAA L DFALGTDT G VR+PA+ CG+ G
Sbjct: 73 VTGINDWSGTPENPKWPHLVPGGSSSGSAAAVAAGLADFALGTDTGGSVRIPAACCGVFG 132
Query: 195 YRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDI 254
+P+ G VS GV+P ++D VG +A +A +L R + ++P ARR + A
Sbjct: 133 LKPTFGRVSRHGVMPTDSTIDCVGPIATSADMLMRA------MEIIDPTFARRSVNA--- 183
Query: 255 FQLSKVPKLKTIHVISKAIESLSGYQNPE-HMNVGQYIASNVPSLKGLRAQSTSPENGTA 313
P++ + V NP H V + +A++ G+ ++ A
Sbjct: 184 ------PRIGRVAV----------KANPAIHRAVNEALAAS-----GVESRDVK----LA 218
Query: 314 TLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNE 373
L+A S L++ E T +++ +G +V R+ +A T++ I VR
Sbjct: 219 GLEAAFSAGLAIINAENVTGLGHLLQTGL--VGDDVARRLAQAAAVTREEIAAAEFVRAA 276
Query: 374 MRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPI 433
A + LL+ +LV+PT+ + P L + + T V ++SG V +P+
Sbjct: 277 FTAEIDALLEALDVLVLPTMPEFPPALAEARGDLSAVGMTTFVRPF--NLSGHPAVTVPL 334
Query: 434 GKYNEHPISISFITYHGGDKFLL 456
N P + + G D +L
Sbjct: 335 LAENGAPAGLQIVGRKGEDALVL 357
>gi|311106567|ref|YP_003979420.1| amidase [Achromobacter xylosoxidans A8]
gi|310761256|gb|ADP16705.1| amidase family protein 10 [Achromobacter xylosoxidans A8]
Length = 449
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 182/398 (45%), Gaps = 38/398 (9%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R + GL +IKD+FD++G T GS + A+ A VV L+ GA IG+T +
Sbjct: 66 RSAIEGLPISIKDLFDIEGETTMAGSVA-REGEPAADADAEVVRRLVAAGAVIIGRTNMT 124
Query: 130 EFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
EFA+ G N HYGTP+NP + IPGGSSSG+AV+VA + A+G+DT G VR+PA
Sbjct: 125 EFAYSGLGINPHYGTPLNPYDRATGRIPGGSSSGAAVSVADGMAAAAIGSDTGGSVRIPA 184
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRA-- 245
+ CG+ G++PS VSM GVLP S +LD++G +A + + +L P A
Sbjct: 185 ALCGLTGFKPSAWRVSMEGVLPLSANLDSIGPIAASVRCCAELDAILSGDGGPVPEAAAL 244
Query: 246 RRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLK---GLR 302
R L A +P + + K +V A+ V LK L
Sbjct: 245 RGLRLA--------IPTTLALDAMDK--------------HVADSFAAAVSRLKDAGALV 282
Query: 303 AQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQD 362
+ PE A L A+++ E + + + A R V R++ + +
Sbjct: 283 EEIAIPE--FAELAAINA-KGGFTAAEAWAWHRDLIARAGKRYDPRVVSRIMRGKDMSAA 339
Query: 363 NIKILYKVRNEMRAALQRLLKDDKILVIPTVSD-PPLKLNTKKTYSAEFHDRTLVLSS-- 419
+ L R AA+ R + L++PT P + + + A + L+L +
Sbjct: 340 DYLDLLDAREAWVAAVDRRIAGYDALIMPTTPIVAPAVADLQASDDAYYAANGLILRNPT 399
Query: 420 -IGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
I + GC +++P P+ + +G D+ +L
Sbjct: 400 LINFLDGCA-LSLPCHASGTAPVGLMIAGSNGTDRRIL 436
>gi|115523813|ref|YP_780724.1| amidase [Rhodopseudomonas palustris BisA53]
gi|115517760|gb|ABJ05744.1| Amidase [Rhodopseudomonas palustris BisA53]
Length = 449
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 187/408 (45%), Gaps = 53/408 (12%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA AG+ A+KD+FD+KG VT GS D+ AE A V L + G IG+T
Sbjct: 66 AAPSAFAGIPIAVKDLFDIKGQVTRAGSRALD-DNPRAEADAPAVARLRRAGFVVIGRTN 124
Query: 128 LDEFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
+ EFA+ G N HYGTP + H+PGGS+SG AVAV + ALGTDT G R+
Sbjct: 125 MTEFAYSGIGINPHYGTPKGAWQRAIGHVPGGSTSGGAVAVVDGMAHGALGTDTGGSCRI 184
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ--LNAVEPR 243
PA+F G++G++P+ V G +P S +LD+VG LAR+ + VL L + PR
Sbjct: 185 PAAFNGLVGFKPTQSRVPRDGAVPLSFTLDSVGPLARSVQCCATLDSVLADQPLAELTPR 244
Query: 244 RARRLIFA-------DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVP 296
+ + A DD+ +T+ +S+A + + PE ++V VP
Sbjct: 245 SVQGMRLAVPTTMVLDDLDDAVAQAFERTLEALSRAGALIERIEVPEFLDV-------VP 297
Query: 297 -SLKGLRAQSTSPENGTATLKALSSVMLSLQRY---EFKTIYEEWVKSAKPRLGYNVFER 352
S KG A + S + RY +Y+ V+ +R
Sbjct: 298 MSAKGGFAAAES---------------YAWHRYLIVAHGDVYDPRVR-----------DR 331
Query: 353 VLEA-INTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFH 411
+L + D + ++ ++ + + RL D I V+PT ++ P K+ A
Sbjct: 332 ILRGESQSAADYVDLVSARKSLVERSTARLSPYDAI-VLPTAANTPPKIADLADDKAFTK 390
Query: 412 DRTLVL--SSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
L L ++ +M C +++P + E P+ + + G D+ + D
Sbjct: 391 ANLLALRNCTLINMIDGCAISLPCHREGEVPVGLMLASTAGTDRRIFD 438
>gi|421481278|ref|ZP_15928864.1| amidase [Achromobacter piechaudii HLE]
gi|400200728|gb|EJO33678.1| amidase [Achromobacter piechaudii HLE]
Length = 449
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 187/408 (45%), Gaps = 32/408 (7%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R + GL +IKD+FD++G T GS + A+ A VV L+ GA IG+T +
Sbjct: 66 RSAVEGLPISIKDLFDIEGETTMAGSVA-REGEPAADENAEVVQRLIAAGAVIIGRTNMT 124
Query: 130 EFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
EFA+ G N HYGTP+NP + IPGGSSSG+AV+VA + +G+DT G VR+PA
Sbjct: 125 EFAYSGLGINPHYGTPLNPYDRATGRIPGGSSSGAAVSVADGMAVAGIGSDTGGSVRIPA 184
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
+ CG+ G++PS VSM GVLP S +LD++G +A AS+ +L+AV
Sbjct: 185 ALCGLTGFKPSAWRVSMTGVLPLSANLDSIGPIA--ASV-----RCCAELDAV------- 230
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
+ D S VP+ + + A+ + E +V A+ V LK A +
Sbjct: 231 -LSGDG----SPVPEALPLRGLRLAVPTTLALDAMEK-HVADSFAAAVARLK--EAGAMV 282
Query: 308 PENGTATLKALSSV--MLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIK 365
E L ++ E + + + A R V R++ + + +
Sbjct: 283 DEIAIPEFAELGNINSKGGFTAAEAWAWHRDLIARAGKRYDPRVVSRIMRGQDMSAADYL 342
Query: 366 ILYKVRNEMRAALQRLLKDDKILVIPTVSD-PPLKLNTKKTYSAEFHDRTLVLSS---IG 421
L R AA+ R + L++PT P + + A + L+L + I
Sbjct: 343 DLLDAREAWVAAVDRRIAGYDALIMPTTPIVAPAVADLAASDEAYYAANGLILRNPTLIN 402
Query: 422 SMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQ 469
+ GC +++P P+ + +G D+ +L L + + L +
Sbjct: 403 FLDGCA-LSLPCHAQGTAPVGLMIAGSNGADRRILAIGLSVEERLAAR 449
>gi|262279246|ref|ZP_06057031.1| Glu-tRNA amidotransferase [Acinetobacter calcoaceticus RUH2202]
gi|262259597|gb|EEY78330.1| Glu-tRNA amidotransferase [Acinetobacter calcoaceticus RUH2202]
Length = 369
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 121/392 (30%), Positives = 186/392 (47%), Gaps = 37/392 (9%)
Query: 76 LKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGI 135
LK +KD D++G T GS D A+ A VV +LK I KT L E AFGI
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRAL-LDVEPAQYDAEVVKNILKADCEIIAKTNLHELAFGI 73
Query: 136 TGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGY 195
TG N +GTP+NP+ P IPGGSSSGSA A+AA+ DF LGTDT G +R+PA+ CG+ G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAIAAKQADFTLGTDTGGSIRMPAACCGVFGL 133
Query: 196 RPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIF 255
+P+ G VS GV P S SLD VG A + ++ + + ++P
Sbjct: 134 KPTFGRVSRKGVYPPSSSLDCVGPFANSVEMIEKAMQI------IDPSFKPA-------- 179
Query: 256 QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTATL 315
+ + PKL + V + + +Q + N L+ S E+ A
Sbjct: 180 ECTSAPKLAVLDVKADDVIWNCIHQALQKAN--------------LQTTSEKVEHFDAAY 225
Query: 316 KALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNEMR 375
A ++ YE + E K+ +G +V R+L+A TT + +K V+ ++
Sbjct: 226 DAGMQII----NYENWQAFGELTKTG--LIGPDVNNRLLKAAETTLEQVKQAEVVKQQLT 279
Query: 376 AALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGK 435
L LL+ L++PT+ P K+ + A + LV ++SG +++P+
Sbjct: 280 QELDALLEKYDALILPTLPQIPPKVAEAENTVAFLNLTALVRPF--NLSGHPAISVPLET 337
Query: 436 YNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
P+ + ++ H D+ L V D++Q
Sbjct: 338 SEGLPVGLQIVSKHQNDEKLCAIVKFCVDAMQ 369
>gi|445488017|ref|ZP_21458065.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii AA-014]
gi|444767986|gb|ELW92215.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii AA-014]
Length = 369
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 121/398 (30%), Positives = 188/398 (47%), Gaps = 49/398 (12%)
Query: 76 LKFAIKDVFDVKGYVTGFGSP---DWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LK +KD D++G T GS + + H +AE VV +LK IGKT L E A
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLEVEPAHDDAE----VVKNILKADCEIIGKTNLHELA 70
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
FGITG N +GTP+NP+ P IPGGSSSGSA AVAA+ DF LGTDT G +R+PA+ CG+
Sbjct: 71 FGITGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGV 130
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G +P+ G VS GV P S SLD VG A + ++ + ++ D
Sbjct: 131 YGLKPTFGRVSRKGVYPPSSSLDCVGPFANSVEMIEKAMQII-----------------D 173
Query: 253 DIF---QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
F + + PKL + V + + YQ + N+ +
Sbjct: 174 PTFKPAECTHTPKLALLDVKADEVVWNCIYQALQKANLETVLEK---------------- 217
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
+A + + YE + E ++ +G +V R+L+A +TT + +K
Sbjct: 218 --VEHFEAAYDAGMQIINYENWQAFGELTQTG--LIGSDVNNRLLKAAHTTLEQVKQAEV 273
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
V+ ++ L LL+ LV+PT+ P K++ + A + LV ++SG +
Sbjct: 274 VKAQLTQELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPF--NLSGHPAI 331
Query: 430 AIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
++P+ P+ + F++ H D+ L D++Q
Sbjct: 332 SVPLETSEGLPVGLQFVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|149238247|ref|XP_001525000.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451597|gb|EDK45853.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 497
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 91/155 (58%), Gaps = 21/155 (13%)
Query: 109 AVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAV-- 166
A VV LL + GATCIGK LDEF G N +YG VNP P +PGGS GSA AV
Sbjct: 84 ATVVELLSREGATCIGKANLDEFGMGSANRNSYYGDVVNPFRPGTVPGGSLGGSAAAVCI 143
Query: 167 -------------------AAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGV 207
L DFALGTDT G VR+PA++C ++G++P++G +S GV
Sbjct: 144 PNAKEKSNSEKEVRGGGEVGEALSDFALGTDTGGSVRLPAAYCNVIGFKPTYGRISRWGV 203
Query: 208 LPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
+P +Q+LDTVG+LAR I+ RV V+ + + +P
Sbjct: 204 IPYAQTLDTVGILARKVDIVQRVYDVVNRFDEKDP 238
>gi|72384146|ref|YP_293500.1| amidase [Ralstonia eutropha JMP134]
gi|72123489|gb|AAZ65643.1| Amidase [Ralstonia eutropha JMP134]
Length = 440
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 132/398 (33%), Positives = 184/398 (46%), Gaps = 50/398 (12%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAGL +IKD+FDV+G VT GS A A V L GA IG+T + EF
Sbjct: 69 PLAGLPISIKDLFDVRGQVTRAGSKVLD-GSVPAPADAPAVARLRAAGAVLIGRTNMSEF 127
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
AF G N H+GTP P S I GGS+SG AV+VA + ALGTDT G +R+P++FCG
Sbjct: 128 AFSGLGLNPHFGTPRTPFDASRIAGGSTSGGAVSVAEDMSVAALGTDTGGSIRIPSAFCG 187
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLL-QLNAVEPRRARRLIF 250
+ G++P+ V + G +P S SLD+ G LAR+ + VL ++ P + R L F
Sbjct: 188 LTGFKPTARRVPLDGAVPLSTSLDSAGPLARSVGCCVAMDAVLSGEVLDTSPTKLRELRF 247
Query: 251 --ADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSP 308
D S P+++ A+ LS + + I + P L+ L P
Sbjct: 248 YVTRDFVCDSLDPEVE--QAFDAALAKLSAHG-------ARIIPFDFPELRRL------P 292
Query: 309 E-NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQ-----D 362
E N L A S W +S G +RV + I Q D
Sbjct: 293 EINSGGGLTAAES--------------WAWHRSLLASHGDQYDQRVAQRIRRGQKQSAAD 338
Query: 363 NIKILYKVRN-EMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVL---S 418
I +L R + RAA+ LL+D ++PTV+ P +L+ + F LVL S
Sbjct: 339 YIDLLAARRAMQFRAAV--LLRDADAWLMPTVAVVPPRLDAVERDEDFFAVNGLVLRNPS 396
Query: 419 SIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
I + GC V++P G+ I + HG D +L
Sbjct: 397 VINFLDGCA-VSLPAGEG----IGLGVNALHGRDARVL 429
>gi|417546521|ref|ZP_12197607.1| amidase [Acinetobacter baumannii OIFC032]
gi|421666831|ref|ZP_16106915.1| amidase [Acinetobacter baumannii OIFC087]
gi|421672202|ref|ZP_16112164.1| amidase [Acinetobacter baumannii OIFC099]
gi|400384409|gb|EJP43087.1| amidase [Acinetobacter baumannii OIFC032]
gi|410380110|gb|EKP32701.1| amidase [Acinetobacter baumannii OIFC099]
gi|410386810|gb|EKP39276.1| amidase [Acinetobacter baumannii OIFC087]
Length = 369
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/398 (29%), Positives = 189/398 (47%), Gaps = 49/398 (12%)
Query: 76 LKFAIKDVFDVKGYVTGFGSP---DWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LK +KD D++G T GS + + H +AE V+ +LK IGKT L E A
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSKALLEVEPAHDDAE----VIKNILKADCEIIGKTNLHELA 70
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
FGITG N +GTP+NP+ P IPGGSSSGSA AVAA+ DF LGTDT G +R+PA+ CG+
Sbjct: 71 FGITGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGV 130
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G +P+ G VS GV P S SLD VG A + ++ + ++ D
Sbjct: 131 FGLKPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKAMQII-----------------D 173
Query: 253 DIF---QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
F + ++ PKL ++V + + YQ + N+ +
Sbjct: 174 PTFKPAECTRTPKLALLNVKADEVVWNCIYQALQKANLETVLEK---------------- 217
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
+A + + YE + E ++ +G +V R+L+A +TT + +K
Sbjct: 218 --VEHFEAAYDAGMQIINYENWQAFGELTQTG--LIGSDVNNRLLKAAHTTLEQVKQAEV 273
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
V+ ++ L LL+ LV+PT+ P K++ + A + LV ++SG +
Sbjct: 274 VKAQLTKELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPF--NLSGHPAI 331
Query: 430 AIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
++P+ P+ + ++ H D+ L D++Q
Sbjct: 332 SVPLETSEGLPVGLQIVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|417549156|ref|ZP_12200236.1| amidase [Acinetobacter baumannii Naval-18]
gi|417565340|ref|ZP_12216214.1| amidase [Acinetobacter baumannii OIFC143]
gi|421676025|ref|ZP_16115943.1| amidase [Acinetobacter baumannii OIFC065]
gi|421693108|ref|ZP_16132753.1| amidase [Acinetobacter baumannii IS-116]
gi|395557096|gb|EJG23097.1| amidase [Acinetobacter baumannii OIFC143]
gi|400387124|gb|EJP50197.1| amidase [Acinetobacter baumannii Naval-18]
gi|404558794|gb|EKA64071.1| amidase [Acinetobacter baumannii IS-116]
gi|410380985|gb|EKP33560.1| amidase [Acinetobacter baumannii OIFC065]
Length = 369
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 188/398 (47%), Gaps = 49/398 (12%)
Query: 76 LKFAIKDVFDVKGYVTGFGSP---DWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LK +KD D++G T GS + + H +AE VV +LK IGKT L E A
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLEVEPAHDDAE----VVKNILKADCEIIGKTNLHELA 70
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
FGITG N +GTP+NP+ P IPGGSSSGSA AVAA+ DF LGTDT G +R+PA+ CG+
Sbjct: 71 FGITGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGV 130
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G +P+ G VS GV P S SLD VG A + ++ + ++ D
Sbjct: 131 YGLKPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKAMQII-----------------D 173
Query: 253 DIF---QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
F + ++ PKL ++V + + YQ + N+ +
Sbjct: 174 PTFKPAECTRTPKLALLNVKADEVVWNCIYQALQKANLETVLEK---------------- 217
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
+A + + YE + E ++ +G +V R+L+A TT + +K
Sbjct: 218 --VEHFEAAYDAGMQIINYENWQAFGELTQTG--LIGSDVNNRLLKAAQTTLEQVKQAEV 273
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
V+ ++ L LL+ LV+PT+ P K++ + A + LV ++SG +
Sbjct: 274 VKAQLTEELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPF--NLSGHPAI 331
Query: 430 AIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
++P+ P+ + ++ H D+ L D++Q
Sbjct: 332 SVPLETSEGLPVGLQIVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|169795798|ref|YP_001713591.1| amidase [Acinetobacter baumannii AYE]
gi|213157510|ref|YP_002319555.1| Glu-tRNA amidotransferase [Acinetobacter baumannii AB0057]
gi|215483284|ref|YP_002325491.1| glutamyl-tRNA(Gln) amidotransferase subunit A(Glu-ADTsubunit A)
[Acinetobacter baumannii AB307-0294]
gi|301346133|ref|ZP_07226874.1| Glutamyl-tRNA(Gln) amidotransferase subunit A(Glu-ADTsubunit A)
[Acinetobacter baumannii AB056]
gi|301511349|ref|ZP_07236586.1| Glutamyl-tRNA(Gln) amidotransferase subunit A(Glu-ADTsubunit A)
[Acinetobacter baumannii AB058]
gi|301597072|ref|ZP_07242080.1| Glutamyl-tRNA(Gln) amidotransferase subunit A(Glu-ADTsubunit A)
[Acinetobacter baumannii AB059]
gi|332855507|ref|ZP_08435913.1| Amidase [Acinetobacter baumannii 6013150]
gi|332870331|ref|ZP_08439166.1| Amidase [Acinetobacter baumannii 6013113]
gi|417574089|ref|ZP_12224943.1| amidase [Acinetobacter baumannii Canada BC-5]
gi|421620457|ref|ZP_16061393.1| amidase [Acinetobacter baumannii OIFC074]
gi|421643750|ref|ZP_16084242.1| amidase [Acinetobacter baumannii IS-235]
gi|421649405|ref|ZP_16089799.1| amidase [Acinetobacter baumannii IS-251]
gi|421660217|ref|ZP_16100419.1| amidase [Acinetobacter baumannii Naval-83]
gi|421699438|ref|ZP_16138965.1| amidase [Acinetobacter baumannii IS-58]
gi|421796500|ref|ZP_16232562.1| amidase [Acinetobacter baumannii Naval-21]
gi|421801573|ref|ZP_16237531.1| amidase [Acinetobacter baumannii Canada BC1]
gi|169148725|emb|CAM86591.1| putative Amidase [Acinetobacter baumannii AYE]
gi|213056670|gb|ACJ41572.1| Glu-tRNA amidotransferase [Acinetobacter baumannii AB0057]
gi|213988289|gb|ACJ58588.1| Glutamyl-tRNA(Gln) amidotransferase subunit A(Glu-ADTsubunit A)
[Acinetobacter baumannii AB307-0294]
gi|332727410|gb|EGJ58841.1| Amidase [Acinetobacter baumannii 6013150]
gi|332732316|gb|EGJ63578.1| Amidase [Acinetobacter baumannii 6013113]
gi|400209657|gb|EJO40627.1| amidase [Acinetobacter baumannii Canada BC-5]
gi|404571619|gb|EKA76676.1| amidase [Acinetobacter baumannii IS-58]
gi|408507411|gb|EKK09106.1| amidase [Acinetobacter baumannii IS-235]
gi|408513677|gb|EKK15293.1| amidase [Acinetobacter baumannii IS-251]
gi|408700411|gb|EKL45863.1| amidase [Acinetobacter baumannii OIFC074]
gi|408705495|gb|EKL50832.1| amidase [Acinetobacter baumannii Naval-83]
gi|410399029|gb|EKP51230.1| amidase [Acinetobacter baumannii Naval-21]
gi|410405154|gb|EKP57202.1| amidase [Acinetobacter baumannii Canada BC1]
Length = 369
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/398 (29%), Positives = 189/398 (47%), Gaps = 49/398 (12%)
Query: 76 LKFAIKDVFDVKGYVTGFGSP---DWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LK +KD D++G T GS + + H +AE VV +LK IGKT L E A
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLEVEPAHDDAE----VVKNILKADCEIIGKTNLHELA 70
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
FGITG N +GTP+NP+ P IPGGSSSGSA AVAA+ DF LGTDT G +R+PA+ CG+
Sbjct: 71 FGITGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGV 130
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G +P+ G VS G+ P S SLD VG A + ++ + ++ D
Sbjct: 131 FGLKPTFGRVSREGIYPPSSSLDCVGPFANSVEMIEKAMQII-----------------D 173
Query: 253 DIF---QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
F + ++ PKL ++V + + YQ + N+ +
Sbjct: 174 PTFKPAECTRTPKLALLNVKADEVVWNCIYQALQKANLETVLQK---------------- 217
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
+A + + YE + E ++ +G +V R+L+A +TT + +K
Sbjct: 218 --VEHFEAAYDAGMQIINYENWQAFGELTQTG--LIGSDVNNRLLKAAHTTLEQVKQAEV 273
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
V+ ++ L LL+ LV+PT+ P K++ + A + LV ++SG +
Sbjct: 274 VKAQLTEELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPF--NLSGHPAI 331
Query: 430 AIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
++P+ P+ + ++ H D+ L D++Q
Sbjct: 332 SVPLETSEGLPVGLQIVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|218671321|ref|ZP_03520991.1| amidase [Rhizobium etli GR56]
Length = 182
Score = 134 bits (337), Expect = 1e-28, Method: Composition-based stats.
Identities = 75/163 (46%), Positives = 100/163 (61%), Gaps = 1/163 (0%)
Query: 59 IPFPQPP-PPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLK 117
+P+P AA L+GL+ A+KD+FDV GY T G+ TA +V LL
Sbjct: 1 MPYPDADIGHAAIGLLSGLRLAVKDLFDVAGYPTAAGNAAVLAASGIKTATAPLVQTLLD 60
Query: 118 NGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGT 177
GA +GKT DE A+ + G N H+G P NP+ P+ IPGGSSSGSAVAVAA L D LGT
Sbjct: 61 AGACFVGKTNTDELAYSLIGGNIHFGMPRNPRDPNLIPGGSSSGSAVAVAAGLADLGLGT 120
Query: 178 DTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLL 220
DT G +R+PA+ G++G+RP+HG++ V P + S D G +
Sbjct: 121 DTSGSIRLPAAINGLIGWRPTHGSLDNRAVRPLAPSFDVPGFM 163
>gi|92118200|ref|YP_577929.1| amidase [Nitrobacter hamburgensis X14]
gi|91801094|gb|ABE63469.1| Amidase [Nitrobacter hamburgensis X14]
Length = 449
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 183/404 (45%), Gaps = 45/404 (11%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA P AG+ +IKD+FD+KG V+ GS D A A VV L + G IG+T
Sbjct: 66 AAPSPFAGIPVSIKDLFDIKGQVSRAGSRALD-DAPPAANDAPVVARLRRAGFVVIGRTN 124
Query: 128 LDEFAFGITGENKHYGTPVN--PQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
+ EFA+ G N HYGTP N + H+PGGSSSG+AV++ + ALGTDT G R+
Sbjct: 125 MTEFAYSGLGINPHYGTPKNRWQRDVGHVPGGSSSGAAVSITDGMAHGALGTDTGGSCRI 184
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ--LNAVEPR 243
PA++CGI+GY+P+ + + G +P S +LD+ G +AR+ + VL + V PR
Sbjct: 185 PAAYCGIVGYKPTARRIPLDGGVPLSVTLDSYGPIARSVGCCAAMDAVLADEPIAPVVPR 244
Query: 244 RARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIAS-NVPSLKGLR 302
+ L A +P + +S A+ + N G I VP +
Sbjct: 245 PVKGLRLA--------MPTTVMLDDLSSAVARAFEHALDRLANAGAVIERIAVPEFAEVA 296
Query: 303 AQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQD 362
A++ A A +++ + +Y+ PR V R+ + +
Sbjct: 297 ARNVGGGFSAAESWAWHRALIAKK----AELYD-------PR----VISRIRHGESLSAA 341
Query: 363 NIKILYKVRNEMRAALQRLLKDDKILVIPTVS-DPPLKLNTKKTYSAEFHDRTLVLSSIG 421
+ L VR + A +R + L+ PTV+ PP+ + HD +++
Sbjct: 342 DYVDLLAVRRAIIAGFERRVAPYDALIAPTVAITPPVIADLA-------HDAAYAKANML 394
Query: 422 SMSGC--------CQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
S+ C C +++P + E P+ + G D+ + +
Sbjct: 395 SLRNCALINILDGCAISLPCHREGEAPVGLMLAAAGGSDRRIFE 438
>gi|405382677|ref|ZP_11036456.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium sp. CF142]
gi|397320899|gb|EJJ25328.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium sp. CF142]
Length = 456
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 187/384 (48%), Gaps = 36/384 (9%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A KD+FD++G T GS D AE+ A +V L G IG+T + EFA
Sbjct: 72 LDGIPIAWKDLFDIEGMATTAGSVVLAGDA-PAEQDAAIVATLKNAGMLAIGRTNMSEFA 130
Query: 133 FGITGENKHYGTPVNPQMPSH--IPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
F G N HYGTP NP IPGGSSSG+ VAVAA LV A+GTDT G VR+PA+
Sbjct: 131 FSGLGINPHYGTPENPHSKDEPRIPGGSSSGAGVAVAAGLVPVAMGTDTGGSVRIPAALN 190
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIF 250
GI+GY+ + G +M GV P + SLD++G L R+ V V+ L A P R+ +
Sbjct: 191 GIVGYKATRGRYAMEGVYPLAASLDSLGPLCRSVQDAVWVDAVMRGLTA--PTVTRQSLK 248
Query: 251 ADDIFQLSKVPKLKTIHVISKAI-ESLSGYQNPEHM-NVGQYIAS-NVPSLKGLRAQSTS 307
+I +P+ + + E+ G E + + G +I+ N+P+ + + A
Sbjct: 249 GVEIV----IPRNIVFDGLGSGVAEAFEG--GVERLRSAGAHISPINIPAFEEILA---- 298
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
L A +++ + + E R+ + V R T+ + +
Sbjct: 299 -------LMAKHGALVTAEAFALH--RERLAGPEAVRMDHRVVLRTRLGEKTSMADYIAI 349
Query: 368 YKVRNEMRAALQRLLKDDKILVIPTVSD--PP---LKLNTKKTYSAEFHDRTLVLSSIGS 422
R + A + RL+ ++ L P+V+ PP L+ + + ++A +TL +++G+
Sbjct: 350 LAGRTRLIAEVDRLVG-NRFLAFPSVAHVAPPIATLQRDDELFFAANV--KTLRNTALGN 406
Query: 423 MSGCCQVAIPIGKYNEHPISISFI 446
C V+IP GK E + + F+
Sbjct: 407 FLDWCGVSIPCGK-GEADMPVGFL 429
>gi|296534637|ref|ZP_06897042.1| allophanate hydrolase [Roseomonas cervicalis ATCC 49957]
gi|296265025|gb|EFH11245.1| allophanate hydrolase [Roseomonas cervicalis ATCC 49957]
Length = 449
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 103/177 (58%), Gaps = 3/177 (1%)
Query: 66 PPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGK 125
P ++PL G+ FA+KD DV G T P + + +R A V L++ GA + K
Sbjct: 62 PATGKKPLWGIPFAVKDNIDVAGMPTSAACPAFA---YAPDRDAGAVQRLVEAGAIPMAK 118
Query: 126 TVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
T LD+FA G+ G + P NP+ P +PGGSSSGSAVAVA L+ F+LGTDT G R+
Sbjct: 119 TNLDQFATGLVGVRTPHPVPRNPRAPGRVPGGSSSGSAVAVARGLLPFSLGTDTAGSGRI 178
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
PA CG++G +P+ G VS GV+P +SLD V L R + V VL +A +P
Sbjct: 179 PAGLCGLVGLKPTPGAVSSRGVVPACRSLDCVSLFTRGVAEAWAVQAVLAGPDAEDP 235
>gi|85716667|ref|ZP_01047636.1| amidase [Nitrobacter sp. Nb-311A]
gi|85696507|gb|EAQ34396.1| amidase [Nitrobacter sp. Nb-311A]
Length = 449
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 181/404 (44%), Gaps = 45/404 (11%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA P AG+ +IKD+FDV+G V+ GS K D A + A VV L + G IG+T
Sbjct: 66 AAPSPYAGIPVSIKDLFDVEGQVSRAGSLTLK-DAPPAAKDAPVVARLRRAGFVVIGRTN 124
Query: 128 LDEFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
+ EFA+ G N HYGTP NP + ++PGGSSSG+AV++ + ALGTDT G R+
Sbjct: 125 MTEFAYSGLGINPHYGTPKNPWRRDIGYVPGGSSSGAAVSITDGMAYGALGTDTGGSCRI 184
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLL--QLNAVEPR 243
PA++CGI+GY+P+ V + G +P S +LD+ G +AR+ + VL + V PR
Sbjct: 185 PAAYCGIVGYKPTARRVPLDGGIPLSVTLDSYGPIARSVGCCAVLDAVLTGEPIAQVVPR 244
Query: 244 RARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRA 303
R L A VP + + NP + + L
Sbjct: 245 PVRGLRLA--------VPTTVMLDDL-----------NPAVARAFERALDRLADAGALID 285
Query: 304 QSTSPENGTATLKALSSVMLSLQRYEF-KTIYEEWVKSAKPRLGYNVFERVLEAINTTQD 362
PE G + + + + + + + E + PR V R+ + +
Sbjct: 286 HIAVPEFGEVAALNVGGGFAAAESWAWHRALIAEKAELYDPR----VLSRIRRGESLSAA 341
Query: 363 NIKILYKVRNEMRAALQRLLKDDKILVIPTVS-DPPLKLNTKKTYSAEFHDRTLVLSSIG 421
+ L +R + A +R + L+ PTV+ PP+ + D V +++
Sbjct: 342 DYVDLLTIRRPIIAGFERRVAPYDALIAPTVAITPPVMADLA-------DDAAYVKANML 394
Query: 422 SMSGC--------CQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
S+ C C +++P + E P+ + G D+ + +
Sbjct: 395 SLRNCSLINILDGCAISLPCHREGEPPVGLMLAAAGGSDRRIFE 438
>gi|413961019|ref|ZP_11400248.1| amidase [Burkholderia sp. SJ98]
gi|413931733|gb|EKS71019.1| amidase [Burkholderia sp. SJ98]
Length = 380
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 122/355 (34%), Positives = 170/355 (47%), Gaps = 43/355 (12%)
Query: 51 AFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAV 110
AFL++F+L AA P AIKD D+ GY T S D A R A
Sbjct: 3 AFLQQFDLATHA-----AADAP----TIAIKDSIDIAGYPTTAASRALA-DAPPAPRHAQ 52
Query: 111 VVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQL 170
VV LL G K + E AFG+TG N GTPVNPQ P+ IPGGSSSGSA AV L
Sbjct: 53 VVQRLLDAGWRITAKANMHELAFGMTGLNDFSGTPVNPQDPARIPGGSSSGSASAVGLGL 112
Query: 171 VDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRV 230
VD ALGTDT G VR PA+ CG++G +P+ G VS GV P SLD VG AR ++ V
Sbjct: 113 VDAALGTDTGGSVRCPAACCGVIGLKPTFGRVSREGVAPRQTSLDCVGPFARE---MNTV 169
Query: 231 GHVLLQLN-AVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQ 289
V+L ++ + + RARR + A + +P ++ I A+ S
Sbjct: 170 IDVMLAIDPSFQGGRARRDVTAIRV----ALPDVQAEGRIRDAVASAVARSG-------- 217
Query: 290 YIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNV 349
+AS L+ ++ T+ G A + A E + V S K LG ++
Sbjct: 218 -LASRAVQLESIQDAFTA---GLAVINA-----------ETWRAFGHLVGSGK--LGPDI 260
Query: 350 FERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKK 404
R+ A NT + ++R + + R+L D +L++PT+ P+ + +
Sbjct: 261 LARLSAAANTPVSELDAAERIRRDFTDEVDRVLADADVLILPTMPSLPITIEAAR 315
>gi|412338126|ref|YP_006966881.1| amidase [Bordetella bronchiseptica 253]
gi|408767960|emb|CCJ52718.1| putative amidase [Bordetella bronchiseptica 253]
Length = 449
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/154 (48%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R + GL +IKD+FDV G T GS ++D A R AVVV L GA +G+T +
Sbjct: 66 RSAIDGLPLSIKDLFDVAGETTMAGSVA-RQDEPAAVRDAVVVRRLRAAGAVIVGRTNMT 124
Query: 130 EFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
EFA+ G N HYGTP NP + IPGGSSSG+AV+V + A+G+DT G VR+PA
Sbjct: 125 EFAYSGLGLNPHYGTPRNPWDRATGRIPGGSSSGAAVSVTDGMASGAIGSDTGGSVRIPA 184
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLA 221
+ CG+ G++PS VSM GVLP S +LD++G LA
Sbjct: 185 ALCGLAGFKPSAQRVSMQGVLPLSANLDSIGPLA 218
>gi|440232242|ref|YP_007346035.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Serratia marcescens FGI94]
gi|440053947|gb|AGB83850.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Serratia marcescens FGI94]
Length = 449
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/153 (49%), Positives = 99/153 (64%), Gaps = 7/153 (4%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHE--AERTAVVVTLLLKNGATCIGKTVLDE 130
L G+ ++KD+FDV G T GS + H A+R A VV LL+ GA IGKT + E
Sbjct: 70 LDGVPVSVKDLFDVAGEATRGGS---RALAHAPAAQRHAAVVQRLLQAGAVVIGKTNMTE 126
Query: 131 FAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPAS 188
FA+ G N HYGTP NP + IPGGSSSG+AVAV+ + A+G+DT G VR+PA+
Sbjct: 127 FAYSGLGINPHYGTPANPWRRQERRIPGGSSSGAAVAVSDGMGFGAIGSDTGGSVRIPAA 186
Query: 189 FCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLA 221
FCG+ GY+PS + M GV P S SLD+VG++A
Sbjct: 187 FCGLTGYKPSASRIDMAGVQPLSPSLDSVGVIA 219
>gi|425746237|ref|ZP_18864267.1| amidase [Acinetobacter baumannii WC-323]
gi|425486114|gb|EKU52486.1| amidase [Acinetobacter baumannii WC-323]
Length = 370
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 120/386 (31%), Positives = 181/386 (46%), Gaps = 46/386 (11%)
Query: 75 GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFG 134
LK +KD D++G T GS + A A VV +L KT L E AFG
Sbjct: 14 ALKVMVKDSIDIQGMKTMAGSQALMQSQ-AAPANAEVVDRILAADCQITAKTNLHELAFG 72
Query: 135 ITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILG 194
ITG N +GT +NP+ P IPGGSSSGSA A+AA L DF LGTDT G +R+PA+ CG+ G
Sbjct: 73 ITGINHTFGTAINPKYPELIPGGSSSGSAAAIAAGLADFTLGTDTGGSIRMPAACCGVYG 132
Query: 195 YRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDI 254
+ + G VS GV P S SLD VG A + +L + ++P +
Sbjct: 133 LKSTFGRVSRAGVHPASSSLDCVGPFANSVEMLESAMQI------IDPTFHAQA------ 180
Query: 255 FQLSKVPKLKTIHVI--SKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGT 312
+L++VPKL ++V S IE++ Y ++ V T
Sbjct: 181 -ELAQVPKLAWLNVAADSAVIETIQQYLTQANLTV-----------------------ST 216
Query: 313 ATLKALSSVM---LSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
T++ ++ + + YE Y E ++ LG +V R+L+A +TT +K +
Sbjct: 217 VTVEGFAAAFDAGMQIINYENWQAYGELTQTG--LLGADVNGRLLKAADTTLAQVKQAEQ 274
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
VR + A L LL L++PT+ P KL + A + LV ++SG +
Sbjct: 275 VRADFTAELDALLAQYDALILPTLPQLPPKLVDAENTVAFLNLTALVRPF--NLSGHPAI 332
Query: 430 AIPIGKYNEHPISISFITYHGGDKFL 455
++P+ P+ + + D++L
Sbjct: 333 SVPLQTEQGQPVGLQIVAKRNADEYL 358
>gi|153010121|ref|YP_001371335.1| amidase [Ochrobactrum anthropi ATCC 49188]
gi|151562009|gb|ABS15506.1| Amidase [Ochrobactrum anthropi ATCC 49188]
Length = 443
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 185/397 (46%), Gaps = 46/397 (11%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAGL +K FD +G+VT GS + + A+V L + GAT + +T + EF
Sbjct: 68 PLAGLTMTVKACFDTEGWVTSCGSKALQEAAPASASAALVRRLRM-GGATLLAQTNMTEF 126
Query: 132 AFGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A+G G N H+GTP P P+ I GGSSSG+AVAVA DFA+ +DT G R+PA+F
Sbjct: 127 AYGALGVNTHFGTPRTPLDPAGEAIAGGSSSGAAVAVARGYSDFAICSDTSGSARIPAAF 186
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
CG++G++PS G G+ S S D G+++ + + + V + A +PRR++++
Sbjct: 187 CGVVGFKPSRGRYETDGMHWLSTSFDVPGIISTSVAHCRLIDDVATGIPARKPRRSKQIR 246
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIAS-NVPSLKGLRAQSTSP 308
A VP+L + + +E L G G + +PSL + + +
Sbjct: 247 LA--------VPRLLSETALDNTVEDLFGACRSALEAAGIVVQDIELPSL--IESARIAV 296
Query: 309 ENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILY 368
+ G +A +L R ++ + P +G I ++N LY
Sbjct: 297 DGGMIGAEA-----YALHRERLAVDFDSY----DPLVGTR--------IQKGRENPAYLY 339
Query: 369 -KVRNEMRAALQRLLKDDKI-----LVIPTVSDPPLKLNT---KKTYSAEFHDRTLVLSS 419
N + A ++ D +I ++PTV P L T ++TY A + R L+
Sbjct: 340 VNALNALAACREQF--DAEIEGFDGFILPTVPMLPPALATLADEETYLA-LNRRAFSLTE 396
Query: 420 IGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+ +++PIGK HP + G D+ LL
Sbjct: 397 FANRLDLPSISLPIGK---HPAGLMLTGLRGEDETLL 430
>gi|404319588|ref|ZP_10967521.1| amidase [Ochrobactrum anthropi CTS-325]
Length = 443
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 185/397 (46%), Gaps = 46/397 (11%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAGL +K FD +G+VT GS + + A+V L + GAT + +T + EF
Sbjct: 68 PLAGLTMTVKACFDTEGWVTSCGSKALQEAAPASASAALVRRLRM-GGATLLAQTNMTEF 126
Query: 132 AFGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A+G G N H+GTP P P+ I GGSSSG+AVAVA DFA+ +DT G R+PA+F
Sbjct: 127 AYGALGVNTHFGTPRTPLDPAGEAIAGGSSSGAAVAVARGYSDFAICSDTSGSARIPAAF 186
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
CG++G++PS G G+ S S D G+++ + + + V + A +PRR++++
Sbjct: 187 CGVVGFKPSRGRYETDGMHWLSTSFDVPGIISTSVAHCRLIDDVATGIPARKPRRSKQIR 246
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIAS-NVPSLKGLRAQSTSP 308
A VP+L + + +E L G G + +PSL + + +
Sbjct: 247 LA--------VPRLLSETALDNTVEDLFGACRSALEATGIVVQDIELPSL--IESARIAV 296
Query: 309 ENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILY 368
+ G +A +L R ++ + P +G I ++N LY
Sbjct: 297 DGGMIGAEA-----YALHRERLAVDFDSY----DPLVGTR--------IQKGRENPAYLY 339
Query: 369 -KVRNEMRAALQRLLKDDKI-----LVIPTVSDPPLKLNT---KKTYSAEFHDRTLVLSS 419
N + A ++ D +I ++PTV P L T ++TY A + R L+
Sbjct: 340 VNALNALAACREQF--DAEIEGFDGFILPTVPMLPPALATLADEETYLA-LNRRAFSLTE 396
Query: 420 IGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+ +++PIGK HP + G D+ LL
Sbjct: 397 FANRLDLPSISLPIGK---HPAGLMLTGLRGEDETLL 430
>gi|75676462|ref|YP_318883.1| amidase [Nitrobacter winogradskyi Nb-255]
gi|74421332|gb|ABA05531.1| amidase [Nitrobacter winogradskyi Nb-255]
Length = 449
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 181/398 (45%), Gaps = 33/398 (8%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA P AG+ +IKD+FDV+G V+ GS K D A + A VV L + G IG+T
Sbjct: 66 AAPSPYAGIPVSIKDLFDVRGQVSRAGSLALK-DAPPAAKDAPVVARLRRAGFVVIGRTN 124
Query: 128 LDEFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
+ EFA+ G N HYGTP N + H+PGGSSSG+AV++ + ALGTDT G R+
Sbjct: 125 MTEFAYSGLGINPHYGTPKNGWRRDVGHVPGGSSSGAAVSITDGMAHGALGTDTGGSCRI 184
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ--LNAVEPR 243
PA++CGI+GY+P+ + + G +P S +LD+ G +AR+ + VL + AV PR
Sbjct: 185 PAAYCGIVGYKPTARRIPLDGGVPLSVTLDSYGPIARSVGCCAVLDAVLADEPVTAVAPR 244
Query: 244 RARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRA 303
R L FA + +A++ L+ + G I
Sbjct: 245 PVRGLRFAAPTTVMLDRLDPAVASAFERALDLLA--------DAGALI-----------D 285
Query: 304 QSTSPENGTATLKALSSVMLSLQRYEF-KTIYEEWVKSAKPRLGYNVFERVLEAINTTQD 362
PE G + + + + + + + E + PR V R+ +
Sbjct: 286 HIAVPEFGEVAELNIGGGFAAAESWAWHRALIAEKAELYDPR----VLSRIRYGEGLSAA 341
Query: 363 NIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVL---SS 419
+ L VR + + R + L+ PTV+ P ++ +A L L S
Sbjct: 342 DYVDLLSVRRAIIGSFGRRVAPYDGLLSPTVAITPPRIADLADDAAYVKANMLSLRNCSL 401
Query: 420 IGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
I + G C +++P + +E P+ + G D+ + +
Sbjct: 402 INILDG-CAISLPCHRESEPPVGLMLAGTGGADRRIFE 438
>gi|427814399|ref|ZP_18981463.1| putative amidase [Bordetella bronchiseptica 1289]
gi|410565399|emb|CCN22955.1| putative amidase [Bordetella bronchiseptica 1289]
Length = 449
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/154 (48%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R + GL +IKD+FDV G T GS ++D A R AVVV L GA +G+T +
Sbjct: 66 RSAIDGLPISIKDLFDVAGETTMAGSVA-RQDEPAAVRDAVVVRRLRAAGAVIVGRTNMT 124
Query: 130 EFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
EFA+ G N HYGTP NP + IPGGSSSG+AV+V + A+G+DT G VR+PA
Sbjct: 125 EFAYSGLGLNPHYGTPRNPWDRATGRIPGGSSSGAAVSVTDGMASGAIGSDTGGSVRIPA 184
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLA 221
+ CG+ G++PS VSM GVLP S +LD++G LA
Sbjct: 185 ALCGLAGFKPSAQRVSMQGVLPLSANLDSIGPLA 218
>gi|90418473|ref|ZP_01226385.1| putative amidase [Aurantimonas manganoxydans SI85-9A1]
gi|90338145|gb|EAS51796.1| putative amidase [Aurantimonas manganoxydans SI85-9A1]
Length = 441
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 123/397 (30%), Positives = 180/397 (45%), Gaps = 46/397 (11%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAGL AIKD+FD +G VT GS + + A R AV V L GA G+T + EF
Sbjct: 68 PLAGLLAAIKDLFDEEGEVTTSGSVHFA-GNAPATRDAVAVERLRAAGAIGCGRTNMSEF 126
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+ G N HYGTP N P IPGGS+SG A+AVA + DFALG+DT G VR+PA+F
Sbjct: 127 AYSGVGLNPHYGTPPNSHDPERIPGGSTSGGAIAVAFGIADFALGSDTGGSVRIPAAFNA 186
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
+ G++P+ V + G P S + D+VG LA + + V VL + P
Sbjct: 187 LAGFKPTQAAVPLDGASPLSGTYDSVGPLALDIATCAAVHAVLSGEDRPAP------TTG 240
Query: 252 DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPEN- 310
D +L + L T + M+ Q A +LK LR + +
Sbjct: 241 DKPLRLGVMRTLLT-----------------DDMDK-QVKADFEAALKALRDEGIELVDV 282
Query: 311 ---GTATLKALSSVMLSLQRYEFKTIYEEWVKSA-KPRLGYNVFERVLEAINTTQDNIKI 366
A A++ ++++ + Y + +++A PR V +R+ A +
Sbjct: 283 ELAEIAQAGAVNRILVASDAHAIHRGYLDALETAGDPR----VLKRIRAAESFGPGEAAA 338
Query: 367 LYKVRNEMRAALQRLLKDDKILVIPTVSD-PPLKLNTKKTYSAEFHDR--TLVL---SSI 420
+ R E A L ++ PTV PPL + + DR LVL S+I
Sbjct: 339 ARQTRAEAIVAFADLADGFDAIIAPTVPIVPPLLEEVEDDF-----DRLNALVLRNPSTI 393
Query: 421 GSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
+ GC +P+ + E P ++ G D +LD
Sbjct: 394 NFLDGCAAT-VPMHRSGELPTGLTIFGPGGRDWHVLD 429
>gi|307941425|ref|ZP_07656780.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Roseibium sp.
TrichSKD4]
gi|307775033|gb|EFO34239.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Roseibium sp.
TrichSKD4]
Length = 429
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/398 (29%), Positives = 191/398 (47%), Gaps = 44/398 (11%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
A+ PLAG ++K +FD+KG T + + D A + A V L + GA +G T +
Sbjct: 52 AKSPLAGALVSVKALFDLKGETTTSAAKVLQIDP-PASQDAPSVVRLDEAGAVFVGLTNM 110
Query: 129 DEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPAS 188
EFA+ G N HYGTP NP P PGGS+SG AV+VA L D A+G+DT G +R+PA+
Sbjct: 111 SEFAYSGLGLNPHYGTPQNPIYPGCAPGGSTSGGAVSVALGLADIAIGSDTGGSLRIPAA 170
Query: 189 FCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLL-QLNAVEPRRARR 247
FCGI G++PS +VS+ G P S SLD+ G +AR S V+ Q + P + R
Sbjct: 171 FCGITGFKPSQASVSLEGGNPLSDSLDSFGPMARTVSACELAWQVMSGQETSSAPAQKAR 230
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
L+ + F ++V + I++ +++ + +V + ++ S L Q
Sbjct: 231 LVVPRN-FGFTEVDQ-----AIAEGFKAVVSHLRKAGFDV---VERDLTSCADLYNQ-VP 280
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
P + T+ E + YE +++ G ++ +RV + ++ I
Sbjct: 281 PWHMTSV--------------ESRAHYETHFQNS----GADMDQRVHARMGKAEEISAIE 322
Query: 368 YKVRNEMRAALQRLLKD------DKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVL---S 418
Y+ R Q+L+ D D +L++PT P KL+ + A F+ L+
Sbjct: 323 YRQTLNRR---QKLIADFATEVGDDLLILPTTPILPPKLSDLED-DANFNRLNLLALRNP 378
Query: 419 SIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
S+ +++ C +A+P K +S + G D LL
Sbjct: 379 SLANVTDACSIALPY-KNGALTLSAMLVAPGGQDHKLL 415
>gi|27378071|ref|NP_769600.1| amidase [Bradyrhizobium japonicum USDA 110]
gi|27351217|dbj|BAC48225.1| glutamyl-tRNA(Gln) amidotransferase subunit [Bradyrhizobium
japonicum USDA 110]
Length = 449
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 120/402 (29%), Positives = 189/402 (47%), Gaps = 41/402 (10%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA AG+ +IKD+FD+KG VT GS D AE A V L K G IG+T
Sbjct: 66 AAPSRYAGIPISIKDLFDIKGQVTRAGSRALD-DSPAAEHDAATVERLRKAGFVLIGRTN 124
Query: 128 LDEFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
+ EFA+ G N HYGTP + H+PGGSSSG+AV+V + ALGTDT G R+
Sbjct: 125 MTEFAYSGIGINPHYGTPKGAWNRAEGHVPGGSSSGAAVSVLDGMAHGALGTDTGGSCRI 184
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ--LNAVEPR 243
PA+F GI+GY+P+ V + G +P S SLD++G LAR+ S + VL + A+ PR
Sbjct: 185 PAAFNGIVGYKPTQRRVPLDGAVPLSFSLDSIGPLARSVSCCAILDAVLANEPVVALRPR 244
Query: 244 RARRLIFA-DDIFQLSKVPKLKTIHVISKAIESLSGYQN-PEHMNVGQYIASNVPSLKGL 301
+ + A L + K +A+++L+ + E + + ++
Sbjct: 245 PVKGMRLAVPTTIALDDLDK-AVAETFERALKTLADHGAIIERIEMAEF----------- 292
Query: 302 RAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQ 361
P N A S + RY T + + PR+ + EA +
Sbjct: 293 --HDIGPMNAKGGFAASES--YAWHRYLITTKGDVY----DPRVSVRIMRG--EA-QSAA 341
Query: 362 DNIKILYKVRNEMRAALQRL---LKDDKILVIPTVSDPPLK---LNTKKTYSAEFHDRTL 415
D I +L NE R+ + R+ + LV+PT ++ P K L K ++ + + R L
Sbjct: 342 DYIDLL----NERRSLIARVNAHIAPYDALVLPTTANTPPKIADLADDKAFTTQ-NLRAL 396
Query: 416 VLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
++ +M C +++P + + P+ + G D+ + +
Sbjct: 397 RNCTLINMIDGCAISLPAHREGDVPVGLMLAGAGGSDRRIFE 438
>gi|33601974|ref|NP_889534.1| amidase [Bordetella bronchiseptica RB50]
gi|33576412|emb|CAE33490.1| putative amidase [Bordetella bronchiseptica RB50]
Length = 449
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/154 (48%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R + GL +IKD+FDV G T GS ++D A R AVVV L GA +G+T +
Sbjct: 66 RSAIDGLPISIKDLFDVAGETTMAGSVA-RQDEPAAVRDAVVVRRLRAAGAVIVGRTNMT 124
Query: 130 EFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
EFA+ G N HYGTP NP + IPGGSSSG+AV+V + A+G+DT G VR+PA
Sbjct: 125 EFAYSGLGLNPHYGTPRNPWDRATGRIPGGSSSGAAVSVTDGMASGAIGSDTGGSVRIPA 184
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLA 221
+ CG+ G++PS VSM GVLP S +LD++G LA
Sbjct: 185 ALCGLAGFKPSAQRVSMQGVLPLSANLDSIGPLA 218
>gi|421807819|ref|ZP_16243677.1| amidase [Acinetobacter baumannii OIFC035]
gi|410416390|gb|EKP68164.1| amidase [Acinetobacter baumannii OIFC035]
Length = 369
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 121/398 (30%), Positives = 186/398 (46%), Gaps = 49/398 (12%)
Query: 76 LKFAIKDVFDVKGYVTGFGSP---DWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LK +KD D++G T GS + + H +AE VV +LK IGKT L E A
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLEVEPAHDDAE----VVKNILKADCEIIGKTNLHELA 70
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
FGITG N +GTP+NP+ P IPGGSSSGSA AVAA+ DF LGTDT G +R+PA+ CG+
Sbjct: 71 FGITGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGV 130
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G +P+ G VS GV P S SLD VG A + ++ + ++ D
Sbjct: 131 YGLKPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKAMQII-----------------D 173
Query: 253 DIF---QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
F + + PKL + V + + YQ + N+ +
Sbjct: 174 PTFKPAECTLTPKLAVLDVKADEVVWNCIYQALQKANLETVLEK---------------- 217
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
+A + + YE + E ++ +G +V R+L+A TT + +K
Sbjct: 218 --VEHFEAAYDAGMQIINYENWQAFGELTQTG--LIGSDVNNRLLKAAATTLEQVKQAEV 273
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
VR ++ L LL+ LV+PT+ P K++ + A + LV ++SG +
Sbjct: 274 VRTQLTQELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPF--NLSGHPAI 331
Query: 430 AIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
++P+ P+ + ++ H D+ L D++Q
Sbjct: 332 SVPLETSEGLPVGLQIVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|164608860|gb|ABY62765.1| IacH [Pseudomonas putida]
Length = 374
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 132/400 (33%), Positives = 183/400 (45%), Gaps = 53/400 (13%)
Query: 74 AGLKFAIKDVFDVKGYVTGFGSPDWKRDHHE-AERTAVVVTLLLKNGATCIGKTVLDEFA 132
+G + +KD DV G T S +H AER A VV+ LL GA GK L E A
Sbjct: 13 SGPRVVVKDTLDVAGTATRASS--QALEHAPLAERHAEVVSNLLAAGARLTGKVSLHELA 70
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
FG TG N++ GT NP+ P IPGGSSSGSA AVAA L DF+LGTDT G VR+PA CG+
Sbjct: 71 FGTTGINRYTGTAANPRFPGRIPGGSSSGSAAAVAAGLADFSLGTDTGGSVRIPACCCGV 130
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G +P+ G VS GV+P SLD VG A A P R + D
Sbjct: 131 FGLKPTFGRVSRKGVMPARTSLDCVGPFA-----------------ASLPMLVRAMSMID 173
Query: 253 DIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNV-GQYIASNVPSLKGLRAQSTSPENG 311
F ++VP I V+ E+ H V G AS +P G
Sbjct: 174 PTFTPAQVPTKARIGVLRVTAEAAI------HKVVQGALAASGLPL-------------G 214
Query: 312 TATLK----ALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
LK A + M+ + R F+ +++ K +G ++ R+ A T+ +
Sbjct: 215 NVELKHFGAAYEAGMVVINRETFEGC-GHLLETGK--VGADIAGRLAAAGQTSDSALAEA 271
Query: 368 YKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCC 427
VR + R+L +L +PT+ D PL+L A +LV ++SG
Sbjct: 272 EGVRTRFTEEVDRMLASYDVLALPTMPDFPLRLEDATDTRAVLGMTSLVRPF--NLSGHP 329
Query: 428 QVAIPIGKYNEHPISISFITYHGGDKFLLDT----VLDLY 463
++IP+G P+ + + G D+ LL +L+LY
Sbjct: 330 ALSIPLGSECGLPVGLQLVAAKGADEKLLAVAERLLLNLY 369
>gi|227499504|ref|ZP_03929611.1| glutaminyl-tRNA synthase (glutamine-hydrolyzing) [Anaerococcus
tetradius ATCC 35098]
gi|227218383|gb|EEI83634.1| glutaminyl-tRNA synthase (glutamine-hydrolyzing) [Anaerococcus
tetradius ATCC 35098]
Length = 470
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 166/355 (46%), Gaps = 44/355 (12%)
Query: 108 TAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVA 167
A V+ LL A + KT +DEFA G G+ ++G NP +PGGSSSGSAVAVA
Sbjct: 97 NASVIENLLAEDAIIVAKTNMDEFAMGGRGKTSYFGPTKNPLDHQRVPGGSSSGSAVAVA 156
Query: 168 AQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASIL 227
V ALGTDT G VR PAS+C I+GY+PS+ +S GV+ + +LD V L A+N L
Sbjct: 157 QGDVLVALGTDTGGSVRCPASYCNIIGYKPSYSIMSRYGVVSMANTLDQVSLFAKNIEDL 216
Query: 228 HRVGHVLLQLNAVEPR------RARRLIFADDIFQLSKVPKLKT---------------I 266
R+ + + +P+ F D F K+ +KT
Sbjct: 217 RRLADISA---SADPKDMTSNLEKYNYTFEDYDFSNKKIAYIKTDSSLYEGIEDAVKEDY 273
Query: 267 HVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQ 326
+ +A+E L P +N +Y P + + S + + SV Q
Sbjct: 274 KIALEALEKLGADLQPIDLNYAKYAN---PVYNVVMSSEVS-----SNMSRYDSVRYGYQ 325
Query: 327 RYEFKTIYEEWVKSAKPRLGYNVFERVLEAINT----TQDNIKIL---YKVRNEMRAALQ 379
++ + + +VKS LG V R+ A+ T D+ KI K+R ++ L+
Sbjct: 326 ADSYENVEDLFVKSRSEGLGEEVQRRI--ALGTMYLSANDDQKIYKKGLKIRTLIKEELE 383
Query: 380 RLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHD-RTLVLSSIGSMSGCCQVAIPI 433
++ +D +++ PT ++ P K++ + D + + I ++SG C +++P+
Sbjct: 384 KIFEDYDLIITPTTTNLPPKMD--EDIDDPLSDFKADGFNVIVNLSGMCGISVPV 436
>gi|114707760|ref|ZP_01440654.1| putative amidase [Fulvimarina pelagi HTCC2506]
gi|114536749|gb|EAU39879.1| putative amidase [Fulvimarina pelagi HTCC2506]
Length = 448
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 98/153 (64%), Gaps = 4/153 (2%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R PL G+ AIKD+ D++G +TGFGS + A+ TA V L + G +GKT +
Sbjct: 71 RGPLHGIPIAIKDLADIEGDITGFGSRIYS--TRPAKTTAPFVQQLEEAGMVIVGKTQMV 128
Query: 130 EFAFGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
EFAFG G N G P NP+MP +I GGSSSGSAVAVAA +V A+G+DT G VR+PA
Sbjct: 129 EFAFGSWGTNSVLGAPRNPRMPDDYYIAGGSSSGSAVAVAADMVPAAIGSDTGGSVRIPA 188
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLL 220
+ CG +G + S+G+V + GV S S DT+G L
Sbjct: 189 ALCGTVGLKTSYGSVPVDGVAALSPSFDTIGPL 221
>gi|375134962|ref|YP_004995612.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acinetobacter
calcoaceticus PHEA-2]
gi|325122407|gb|ADY81930.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
[Acinetobacter calcoaceticus PHEA-2]
Length = 369
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 120/395 (30%), Positives = 184/395 (46%), Gaps = 43/395 (10%)
Query: 76 LKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGI 135
LK +KD D++G T GS + A+ A VV +LK IGKT L E AFGI
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRAL-LNVEPAQDDAEVVKNILKADCEIIGKTNLHELAFGI 73
Query: 136 TGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGY 195
TG N +GTP+NP+ P IPGGSSSGSA AVAA+ DF LGTDT G +R+PA+ CG+ G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVFGL 133
Query: 196 RPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIF 255
+P+ G VS GV P S SLD VG A + ++ + ++ D F
Sbjct: 134 KPTFGRVSRKGVYPPSSSLDCVGPFANSVEMIEKAMQII-----------------DPTF 176
Query: 256 ---QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGT 312
+ + PK+ + V + I YQ + N+ +
Sbjct: 177 KSTEFTSAPKIAVLDVKADEIIWNCIYQAFQKANLETVLEK------------------V 218
Query: 313 ATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRN 372
+A + + YE + E ++ +G +V R+L+A TT + +K VR
Sbjct: 219 EHFEAAYDAGMQIINYENWQAFGELTQTG--LIGSDVNGRLLKAAATTLEQVKQAEVVRA 276
Query: 373 EMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIP 432
++ L LL+ LV+PT+ P K++ + A + LV ++SG +++P
Sbjct: 277 QLTQELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTALVRPF--NLSGHPVISVP 334
Query: 433 IGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
+ P+ + ++ H D+ L D++Q
Sbjct: 335 LETSEGLPVGLQIVSKHQKDEQLCAIAKFFIDAMQ 369
>gi|167566815|ref|ZP_02359731.1| pyrazinamidase/nicotinamidase [Burkholderia oklahomensis EO147]
Length = 375
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 114/331 (34%), Positives = 154/331 (46%), Gaps = 34/331 (10%)
Query: 75 GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFG 134
G AIKD D+ G+ T G+ D AER A VV +L G GK + E AFG
Sbjct: 14 GPTIAIKDTIDIAGHRT-TGASRALADAPPAERHAEVVERVLDAGWRIAGKANMHELAFG 72
Query: 135 ITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILG 194
+TG N + GTPVNPQ P+ IPGGSSSGSA V VD ALGTDT G +R PA+ CG++G
Sbjct: 73 MTGINDYTGTPVNPQDPARIPGGSSSGSASLVGLGRVDAALGTDTGGSIRGPAACCGVIG 132
Query: 195 YRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDI 254
+P+ G VS GV P +LD VG AR+ + L V + A+ P
Sbjct: 133 LKPTFGRVSRRGVAPVDTTLDCVGPFARDVATLVAV------MAALAPG----------- 175
Query: 255 FQLS-KVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTA 313
F S P+L V +S + + GQ + P LR
Sbjct: 176 FDASVASPQLAACRVAIVETDSDAAIRAAVERAAGQADCAATP----LRLDD-------- 223
Query: 314 TLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNE 373
L A L++ E + +V S K LG ++ R+ A TT D + +VR
Sbjct: 224 -LAAAFDAGLAVINAETSRAFGRFVGSGK--LGADIDARLRVAATTTADQLDTAERVRAR 280
Query: 374 MRAALQRLLKDDKILVIPTVSDPPLKLNTKK 404
A + R L +LV+PT+ P+ L+ +
Sbjct: 281 FTAQVDRALDTADVLVLPTLPALPITLDEAR 311
>gi|20093308|ref|NP_619383.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methanosarcina
acetivorans C2A]
gi|23821598|sp|Q8THJ1.1|GATA_METAC RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|19918666|gb|AAM07863.1| glutamyl-tRNA (Gln) amidotransferase, subunit A [Methanosarcina
acetivorans C2A]
Length = 476
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 124/416 (29%), Positives = 184/416 (44%), Gaps = 48/416 (11%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ AIKD V G GS + + A V+ LL GA +GKT LDEF
Sbjct: 61 PLAGVPIAIKDNISVVGLPNSCGSK--ILEGYVPPFNAHVIEKLLDAGAVILGKTNLDEF 118
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G + E +YG NP +PGGSS GSA VAA FALG+DT G VR PA+FCG
Sbjct: 119 AMGSSTETSYYGPTANPWDLERVPGGSSGGSAAVVAAGEAPFALGSDTGGSVRCPAAFCG 178
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
++G +P++G VS GV+ + SL+ VG LA N + +L+ + A RR I +
Sbjct: 179 VVGLKPTYGAVSRYGVVAYANSLEQVGPLANNVEDI----AILMDVIAGYDRRDSTSIDS 234
Query: 252 DDIFQLSKVPKLKTIHV-ISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRA--QSTSP 308
+Q + V +K + + + K + H V + + + + + L A Q S
Sbjct: 235 KTEYQKALVDDVKGLKIGVPKEF-----FGEGIHPGVEKAVWNAIHKFESLGATRQEVSM 289
Query: 309 ENGTATLKALSSVMLSL----------QRYEFKTIYEEW----VKSAKPRLGYNVFERVL 354
N L + + +S RY F+ E W K+ G V R+L
Sbjct: 290 PNINYALASYYIIAMSEASSNLARFDGTRYGFRANGENWHAMVSKTRAEGFGTEVKRRIL 349
Query: 355 EAINTTQDNIKILY-----KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAE 409
Y KVR ++ + L +L+ PT+ +P ++ K
Sbjct: 350 LGTYALSAGYHDKYYLKALKVRTLVKQDFDKALSTVDLLMAPTMPNPAFRIGEK------ 403
Query: 410 FHDR-TLVLSSIGS----MSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVL 460
D TL LS + + ++G V++P G + P+ + + G F TVL
Sbjct: 404 IEDPLTLYLSDVNTCPINLAGVPSVSVPCGFTDGLPVGLQIM----GKPFDEPTVL 455
>gi|345304336|ref|YP_004826238.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Rhodothermus marinus
SG0.5JP17-172]
gi|345113569|gb|AEN74401.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Rhodothermus marinus
SG0.5JP17-172]
Length = 491
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 204/481 (42%), Gaps = 65/481 (13%)
Query: 9 KTNTSNPKVWVVIGVSVVGFVVLAETLRRRRNPKLNGRVDFGAFLERFELIPFPQPPPPA 68
+ NP++ I V G + A L R L R E +P
Sbjct: 30 RIEADNPRLNAFISVDPEGALAQARALDER--------------LARGEPLP-------- 67
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
PL GL A+KDV +K GS ++ + A V+ L + GA IGK
Sbjct: 68 ---PLGGLVLAVKDVICIKDQRVTCGS--RMLENFVSLYDATVIARLREAGAIFIGKANC 122
Query: 129 DEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPAS 188
DEFA G + E ++G NP P ++PGGSS GSAVAVAA++ ALG+DT G +R PA+
Sbjct: 123 DEFAMGSSNETSYFGPARNPINPDYVPGGSSGGSAVAVAARMCQAALGSDTGGSIRQPAA 182
Query: 189 FCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRL 248
FCGI+G +P++G VS G++ + S DT+G + R+ V+ ++ + A
Sbjct: 183 FCGIVGLKPTYGRVSRYGLVAYASSFDTIGPMTHTIEDAARLLQVIAGVDRWDSTSAP-- 240
Query: 249 IFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSP 308
+ D + P +K + I E + +PE V + A+ + ++ + + + P
Sbjct: 241 VEVPDYLEALDQP-IKGLR-IGLPREYFAEGLDPEFRQVLEERAAQLEAVGAVVQEVSLP 298
Query: 309 --ENGTATLKALSSVMLS--LQRYEF-----------------------KTIYEEWVKSA 341
E G AT L++ S L RY+ IY +V+S
Sbjct: 299 HTEYGIATYYILATAEASSNLARYDGIRYGYRADVQQIRRELAESDSDDSVIYRLYVRSR 358
Query: 342 KPRLGYNVFERVLEAINTTQDNIKILY-----KVRNEMRAALQRLLKDDKILVIPTVSDP 396
G V R++ Y +VR +R R + +L+ P P
Sbjct: 359 SEGFGTEVKRRIMLGTYVLSAGYYEAYYAKAQRVRRLIRQDFDRAFEQVDVLLTPASPTP 418
Query: 397 PLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNE-HPISISFITYHGGDKFL 455
P L +K + E + + + + +++G + +P+G ++ P+ + H + L
Sbjct: 419 PFPLGSKLSDPLEMY-LSDIYTVTANLAGIPGLVVPVGTHSSGFPVGAQLLGRHFDEATL 477
Query: 456 L 456
L
Sbjct: 478 L 478
>gi|167573883|ref|ZP_02366757.1| pyrazinamidase/nicotinamidase [Burkholderia oklahomensis C6786]
Length = 375
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 114/331 (34%), Positives = 154/331 (46%), Gaps = 34/331 (10%)
Query: 75 GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFG 134
G AIKD D+ G+ T G+ D AER A VV +L G GK + E AFG
Sbjct: 14 GPTIAIKDTIDIAGHRT-TGASRALADAPPAERHAEVVERVLDAGWRIAGKANMHELAFG 72
Query: 135 ITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILG 194
+TG N + GTPVNPQ P+ IPGGSSSGSA V VD ALGTDT G +R PA+ CG++G
Sbjct: 73 MTGINDYTGTPVNPQDPARIPGGSSSGSASLVGLGRVDAALGTDTGGSIRGPAACCGVIG 132
Query: 195 YRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDI 254
+P+ G VS GV P +LD VG AR+ + L V + A+ P
Sbjct: 133 LKPTFGRVSRRGVAPVDTTLDCVGPFARDVATLVAV------MAALAPG----------- 175
Query: 255 FQLS-KVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTA 313
F S P+L V +S + + GQ + P LR
Sbjct: 176 FDASVASPQLAACRVAIVETDSDAAIRAAVERAAGQADCAATP----LRLDD-------- 223
Query: 314 TLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNE 373
L A L++ E + +V S K LG ++ R+ A TT D + +VR
Sbjct: 224 -LAAAFDAGLAVINAETSRAFGRFVGSGK--LGADIDARLRVAATTTADQLDTAERVRAR 280
Query: 374 MRAALQRLLKDDKILVIPTVSDPPLKLNTKK 404
A + R L +LV+PT+ P+ L+ +
Sbjct: 281 FTAQVDRALGTADVLVLPTLPALPITLDEAR 311
>gi|94496799|ref|ZP_01303374.1| amidase [Sphingomonas sp. SKA58]
gi|94423812|gb|EAT08838.1| amidase [Sphingomonas sp. SKA58]
Length = 432
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 96/156 (61%), Gaps = 3/156 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
P G+ +KD FD+ G+ T GS RD A R AVVV L G +G+T + EF
Sbjct: 52 PYLGMPVTVKDNFDLMGHPTTAGS-RLLRDAPVARRDAVVVQRLRAAGFVLLGRTNMTEF 110
Query: 132 AFGITGENKHYGTPVNPQMPSH--IPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
AF G N H+GTP NP P IPGGSSSG+AV+VA L A+GTDT G +R+PA+
Sbjct: 111 AFSGLGINPHFGTPANPAYPGELRIPGGSSSGAAVSVALGLTRVAVGTDTGGSIRIPAAL 170
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNAS 225
CG+ G++P+ +S GVLP S +LD VG++ +A+
Sbjct: 171 CGVTGFKPTAAAISRDGVLPLSTTLDAVGIIGESAA 206
>gi|445407381|ref|ZP_21432304.1| amidase [Acinetobacter baumannii Naval-57]
gi|444780975|gb|ELX04899.1| amidase [Acinetobacter baumannii Naval-57]
Length = 369
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 186/398 (46%), Gaps = 49/398 (12%)
Query: 76 LKFAIKDVFDVKGYVTGFGSP---DWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LK +KD D++G T GS + + H +AE VV +LK IGKT L E A
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLEVEPAHDDAE----VVKNILKADCEIIGKTNLHELA 70
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
FGITG N +GTP+NP+ P IPGGSSSGSA AVAA+ DF LGTDT G +R+PA+ CG+
Sbjct: 71 FGITGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGV 130
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G +P+ G VS GV P S SLD VG A + ++ + ++ D
Sbjct: 131 YGLKPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKAMQII-----------------D 173
Query: 253 DIF---QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
F + + PKL + V + + YQ + N+ +
Sbjct: 174 PTFKPAECTLTPKLAVLDVKADEVVWNCIYQTLQKANLETVLEK---------------- 217
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
+A + + YE + E ++ +G +V R+L+A TT + +K
Sbjct: 218 --VEHFEAAYDAGMQIINYENWQAFGELTQTG--LIGSDVNNRLLKAAQTTLEQVKQAEV 273
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
V+ ++ L LL+ LV+PT+ P K++ + A + LV ++SG +
Sbjct: 274 VKAQLTKELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPF--NLSGHPAI 331
Query: 430 AIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
++P+ P+ + ++ H D+ L D++Q
Sbjct: 332 SVPLETSEGLPVGLQIVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|452209812|ref|YP_007489926.1| Aspartyl-tRNA amidotransferase subunit A [Methanosarcina mazei
Tuc01]
gi|452099714|gb|AGF96654.1| Aspartyl-tRNA amidotransferase subunit A [Methanosarcina mazei
Tuc01]
Length = 475
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 127/418 (30%), Positives = 185/418 (44%), Gaps = 52/418 (12%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ AIKD V G GS + + A V+ LL GA +GKT +DEF
Sbjct: 60 PLAGVPIAIKDNISVVGLPNSCGSK--ILEGYVPPFNAHVIEKLLSAGAVILGKTNMDEF 117
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G + E H+G NP +PGGSS GSA VAA FALG+DT G VR PASFCG
Sbjct: 118 AMGSSTETSHFGPTANPWDLERVPGGSSGGSAAVVAAGEAPFALGSDTGGSVRCPASFCG 177
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
++G +P++G VS GV+ + SL+ VG LA N + VL+ + A RR I +
Sbjct: 178 VVGLKPTYGAVSRYGVVAYANSLEQVGPLANNVEDI----AVLMDVIAGYDRRDSTSIDS 233
Query: 252 DDIFQLSKVPKLKTIHV-ISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPEN 310
+ + V +K + + + K + H +V + + + + L A T E
Sbjct: 234 KTEYLKALVDDVKGLKIGVPKEF-----FGEGIHPDVEKAVWDAIHKCESLEA--TWEEV 286
Query: 311 GTATLK---------ALSSVMLSL-----QRYEFKTIYEEW----VKSAKPRLGYNVFER 352
+K A+S +L RY F+ E W K+ G V R
Sbjct: 287 SMPHIKYALASYYIIAMSEASSNLARFDGTRYGFRAGGENWHAMVSKTRAEGFGTEVKRR 346
Query: 353 VLEAINTTQDNIKILY-----KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYS 407
+L Y KVR ++ + L +L+ PT+ +P K+ K
Sbjct: 347 ILLGTYALSAGYHDKYYLKALKVRTLVKQDFDKALSKVDLLMAPTMPNPAFKIGEK---- 402
Query: 408 AEFHD-RTLVLSSIGS----MSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVL 460
D TL LS I + ++G +++P G + PI + + G F +TVL
Sbjct: 403 --IEDPLTLYLSDINTCPINLAGVPSISVPCGFTDGLPIGLQIM----GKPFDEETVL 454
>gi|365895917|ref|ZP_09434011.1| putative Glu-tRNA amidotransferase [Bradyrhizobium sp. STM 3843]
gi|365423289|emb|CCE06553.1| putative Glu-tRNA amidotransferase [Bradyrhizobium sp. STM 3843]
Length = 450
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 192/404 (47%), Gaps = 45/404 (11%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA AG+ ++KD+FD+KG VT GS + D A+ A VV L + G IG+T
Sbjct: 67 AAPSRFAGIPVSVKDLFDIKGQVTRAGSRALE-DSAPADADAPVVARLRRAGFVVIGRTN 125
Query: 128 LDEFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
+ EFA+ G N HYGTP + + H+PGGSSSG+AV++A ++ ALGTDT G R+
Sbjct: 126 MTEFAYSGIGINPHYGTPKSAWKREVGHVPGGSSSGAAVSIADRMAYGALGTDTGGSCRI 185
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ--LNAVEPR 243
PA+F GI+GY+P+ V + G +P S +LD+ G LA + VL + ++PR
Sbjct: 186 PAAFNGIVGYKPTQRRVPLDGGVPLSTTLDSFGPLANTVECCAILDAVLADEPIKPLQPR 245
Query: 244 RARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGY-------QNPEHMNVGQYIASNVP 296
+ L A + + +A+E+LS + PE ++VG +
Sbjct: 246 AVKGLRLAVPTTVVLDQLDAEVAQTFDRALETLSKLGALVERIEFPEFLDVG------II 299
Query: 297 SLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEA 356
+KG A + S + R+ + + + PR+ + EA
Sbjct: 300 GMKGGFAAAES---------------YAWHRFLITSKGDVY----DPRVSVRIMRG--EA 338
Query: 357 INTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLK---LNTKKTYSAEFHDR 413
I T + I++L R+ + A R+ D LV+PT ++ P + L + + E + R
Sbjct: 339 I-TVPEYIEMLAGRRSLVARAAARIAPYDA-LVMPTTANAPPRIADLANDEAFGRE-NIR 395
Query: 414 TLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
L ++ +M C +++P E P+ + G D+ L +
Sbjct: 396 ALRNCTMINMMDGCAISLPAHPAGEVPVGLMLAQSGGQDRKLFE 439
>gi|417552111|ref|ZP_12203181.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii Naval-81]
gi|417560391|ref|ZP_12211270.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii OIFC137]
gi|421200069|ref|ZP_15657229.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii OIFC109]
gi|421457206|ref|ZP_15906543.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii IS-123]
gi|421632261|ref|ZP_16072922.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii Naval-13]
gi|421803669|ref|ZP_16239582.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii WC-A-694]
gi|395522973|gb|EJG11062.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii OIFC137]
gi|395563670|gb|EJG25322.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii OIFC109]
gi|400206930|gb|EJO37901.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii IS-123]
gi|400392370|gb|EJP59416.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii Naval-81]
gi|408710239|gb|EKL55472.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii Naval-13]
gi|410412629|gb|EKP64485.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii WC-A-694]
Length = 369
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 121/398 (30%), Positives = 186/398 (46%), Gaps = 49/398 (12%)
Query: 76 LKFAIKDVFDVKGYVTGFGSP---DWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LK +KD D++G T GS + + H +AE VV +LK IGKT L E A
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLEVEPAHDDAE----VVKNILKADCEIIGKTNLHELA 70
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
FGITG N +GTP+NP+ P IPGGSSSGSA AVAA+ DF LGTDT G +R+PA+ CG+
Sbjct: 71 FGITGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGV 130
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G +P+ G VS GV P S SLD VG A + ++ + ++ D
Sbjct: 131 YGLKPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKAMQII-----------------D 173
Query: 253 DIF---QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
F + + PKL + V + + YQ + N+ +
Sbjct: 174 PTFKPAECTLTPKLAVLDVKADEVVWNCIYQTLQKANLETVLEK---------------- 217
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
+A + + YE + E ++ +G +V R+L+A TT + +K
Sbjct: 218 --VEHFEAAYDAGMQIINYENWQAFGELTQTG--LIGSDVNGRLLKAAATTLEQVKQAEV 273
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
VR ++ L LL+ LV+PT+ P K++ + A + LV ++SG +
Sbjct: 274 VRAQLTQELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPF--NLSGHPAI 331
Query: 430 AIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
++P+ P+ + ++ H D+ L D++Q
Sbjct: 332 SVPLETSEGLPVGLQIVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|163796327|ref|ZP_02190288.1| Amidase [alpha proteobacterium BAL199]
gi|159178469|gb|EDP63011.1| Amidase [alpha proteobacterium BAL199]
Length = 451
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 180/401 (44%), Gaps = 42/401 (10%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
A +PL GL +IKD+FDV+G+VT GS D AE A +V L GA +G+T +
Sbjct: 69 APRPLEGLPISIKDLFDVRGHVTTAGSKVLA-DEPPAEVDAPIVARLRAAGAVLVGRTNM 127
Query: 129 DEFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
EFAF G N H GTP NP + IPGGSSSG+AV+VA + +G+DT G VR+P
Sbjct: 128 TEFAFSGIGINPHNGTPANPWDRDTRRIPGGSSSGAAVSVADGMATVGIGSDTGGSVRIP 187
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRR-- 244
+ CG+ G++P+ V +G S +LD++G LA + RV V+ A EP R
Sbjct: 188 SGLCGLAGFKPTQRRVPTVGACALSPTLDSIGPLAPTVACAARVHQVM----AGEPVRPI 243
Query: 245 ARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNP------EHMNVGQYIASNVPSL 298
RR V L+ S +E L G ++ + + +P
Sbjct: 244 GRR-----------SVAGLRFAVPQSLVLEDLDGTTAQCFEAALSRLSAAGAVITEIPFK 292
Query: 299 KGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAIN 358
+ L + + G A ++ YE ++ V A V R+ A
Sbjct: 293 ELLAISEANAKGGFAAVEC----------YE---LHSRHVIRAPDLFDPRVVVRIRRAGE 339
Query: 359 TTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSD--PPL-KLNTKKTYSAEFHDRTL 415
+ + L + R E++AA + +++PT + PP+ +L A+ + L
Sbjct: 340 QSAVDYITLVRRRAEIQAACNAVTAPFDAVLMPTTARIAPPIAELEASDEAFAKNNILML 399
Query: 416 VLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
S+G+ C +P+ + P+ + + GD LL
Sbjct: 400 RNCSVGNFLDRCAATVPVQEPGSAPVGLMLMGETMGDDALL 440
>gi|390576928|ref|ZP_10256973.1| amidase [Burkholderia terrae BS001]
gi|389931166|gb|EIM93249.1| amidase [Burkholderia terrae BS001]
Length = 451
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 127/227 (55%), Gaps = 10/227 (4%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAG+ ++KD+FD+KG VT GS RD A R A V L + GA +G+T + EFA
Sbjct: 68 LAGVPVSVKDLFDIKGQVTTAGS-RILRDATPAVRDAAAVARLREAGAVFVGRTNMSEFA 126
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
F G N HYGT +NP P + GGSSSG+AV+VA V ALGTDT G VR+PA+FCG+
Sbjct: 127 FSGLGLNPHYGTLLNPAHPKRLAGGSSSGAAVSVALGHVAAALGTDTGGSVRIPAAFCGL 186
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQL---NAVEPRRARRL- 248
+G++P+ V + G++P S S D++G +AR+ + ++ A P RL
Sbjct: 187 VGFKPTARRVPLDGIVPLSASFDSIGPIARSVDCCALIDSIVSGQALDTAPRPLAGLRLG 246
Query: 249 ----IFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPE-HMNVGQY 290
ADD+ + + I ++ +A S+ + PE H G+Y
Sbjct: 247 VTSDYVADDLDETVSTAFNRAIGMLRRAGASVERFAFPELHEVAGRY 293
>gi|325261862|ref|ZP_08128600.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium sp. D5]
gi|324033316|gb|EGB94593.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium sp. D5]
Length = 491
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/157 (46%), Positives = 98/157 (62%), Gaps = 8/157 (5%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGS---PDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
PLAG+ A+KD ++G +T S D+K + TA V L K GA IGKT +
Sbjct: 70 PLAGVPVAVKDNLCIEGQLTTCSSRILSDFKPVY-----TAEAVMNLQKAGAVIIGKTNM 124
Query: 129 DEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPAS 188
DEFA G T E YG NP P+H+PGGSS GS AVAAQ +ALG+DT G +R P+S
Sbjct: 125 DEFAMGSTTETSFYGPTKNPHNPAHVPGGSSGGSCAAVAAQECWYALGSDTGGSIRQPSS 184
Query: 189 FCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNAS 225
FCG++G +P++GTVS G++ SLD +G +A++ S
Sbjct: 185 FCGVVGLKPTYGTVSRYGLIAYGSSLDQIGPVAKDVS 221
>gi|293605663|ref|ZP_06688042.1| amidase [Achromobacter piechaudii ATCC 43553]
gi|292815947|gb|EFF75049.1| amidase [Achromobacter piechaudii ATCC 43553]
Length = 449
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R + GL +IKD+FD++G T GS + AE A VV L+ GA IG+T +
Sbjct: 66 RSAVEGLPISIKDLFDIEGETTMAGSVA-REGEPAAEENAEVVQRLIAAGAVIIGRTNMT 124
Query: 130 EFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
EFA+ G N HYGTP+NP + IPGGSSSG+AV+VA + +G+DT G VR+PA
Sbjct: 125 EFAYSGLGINPHYGTPLNPYDRATGRIPGGSSSGAAVSVADGMAVAGIGSDTGGSVRIPA 184
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLA 221
+ CG+ G++PS VSM GVLP S +LD++G +A
Sbjct: 185 ALCGLTGFKPSAWRVSMTGVLPLSANLDSIGPIA 218
>gi|420246927|ref|ZP_14750352.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. BT03]
gi|398072929|gb|EJL64121.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. BT03]
Length = 451
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/227 (39%), Positives = 125/227 (55%), Gaps = 10/227 (4%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAG+ ++KD+FD+KG VT GS RD A R A V L + GA +G+T + EFA
Sbjct: 68 LAGVPVSVKDLFDIKGQVTTAGS-RILRDATPAVRDAAAVARLREAGAVFVGRTNMSEFA 126
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
F G N HYGTPVNP + GGSSSG+AV+VA V ALGTDT G VR+PA+FCG+
Sbjct: 127 FSGLGLNPHYGTPVNPAHAKRLAGGSSSGAAVSVALGHVAAALGTDTGGSVRIPAAFCGL 186
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQL---NAVEPRRARRL- 248
+G++P+ V + G +P S S D++G +AR+ + ++ A P RL
Sbjct: 187 IGFKPTARRVPLDGTVPLSASFDSIGPIARSVDCCALIDSIVSGQALDTAPRPLAGLRLG 246
Query: 249 ----IFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPE-HMNVGQY 290
ADD+ + + I ++ A S+ + PE H G+Y
Sbjct: 247 VTSDYVADDLDETVSTAFNRAIGMLRHAGASVERFAFPELHEVAGRY 293
>gi|193077472|gb|ABO12292.2| Glu-tRNA amidotransferase [Acinetobacter baumannii ATCC 17978]
Length = 369
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 120/395 (30%), Positives = 187/395 (47%), Gaps = 43/395 (10%)
Query: 76 LKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGI 135
LK +KD D++G T GS + A+ A ++ +LK I KT L E AFGI
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRAL-LNVEPAQDDAEIIKNILKADCEIIAKTNLHELAFGI 73
Query: 136 TGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGY 195
TG N +GTP+NP+ P IPGGSSSGSA AVAA+ DF LGTDT G +R+PA+ CG+ G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVFGL 133
Query: 196 RPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIF 255
+P+ G VS GV P S SLD VG A + ++ + ++ D F
Sbjct: 134 KPTFGRVSRKGVYPPSSSLDCVGPFANSVEMIEKAMQII-----------------DPTF 176
Query: 256 ---QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGT 312
+ + P L + V + I YQ + N+ Q+TS +
Sbjct: 177 KPTEFTSAPNLAVLDVSADEIIWNCIYQAFQKANL----------------QTTSEK--V 218
Query: 313 ATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRN 372
+A + + YE + E ++ +G +V R+L+A +TT + +K VR
Sbjct: 219 EHFEAAYDAGMQIINYENWQAFGELTQTG--LIGSDVNGRLLKAAHTTLEQVKQAEVVRA 276
Query: 373 EMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIP 432
++ L LL+ LV+PT+ P K++ + A + LV ++SG +++P
Sbjct: 277 QLTQELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPF--NLSGHPAISVP 334
Query: 433 IGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
+ P+ + ++ H D+ L D++Q
Sbjct: 335 LETSEGLPVGLQIVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|260550278|ref|ZP_05824490.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
sp. RUH2624]
gi|424055457|ref|ZP_17792980.1| hypothetical protein W9I_01856 [Acinetobacter nosocomialis Ab22222]
gi|425739900|ref|ZP_18858081.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii WC-487]
gi|260406590|gb|EEX00071.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
sp. RUH2624]
gi|407438652|gb|EKF45195.1| hypothetical protein W9I_01856 [Acinetobacter nosocomialis Ab22222]
gi|425495718|gb|EKU61891.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii WC-487]
Length = 369
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 186/398 (46%), Gaps = 49/398 (12%)
Query: 76 LKFAIKDVFDVKGYVTGFGSP---DWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LK +KD D++G T GS + + H +AE VV +LK IGKT L E A
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSKALLEVEPAHDDAE----VVKNILKADCEIIGKTNLHELA 70
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
FGITG N +GTP+NP+ P IPGGSSSGSA AVAA+ DF LGTDT G +R+PA+ CG+
Sbjct: 71 FGITGINHTFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGV 130
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G +P+ G VS GV P S SLD VG A + ++ + ++ D
Sbjct: 131 FGLKPTFGRVSRKGVYPPSSSLDCVGPFANSVEMIEKAMQII-----------------D 173
Query: 253 DIF---QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
F + + PKL + V + I YQ + N+ +
Sbjct: 174 PTFKPAEYTHTPKLALLDVKADEIVWNCIYQALQKANLETVLEK---------------- 217
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
+A + + YE + E ++ +G +V R+L+A +TT + +K
Sbjct: 218 --VEHFEAAYDAGMQIINYENWQAFGELTQTG--LIGSDVNNRLLKAAHTTLEQVKQAEV 273
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
V+ ++ L LL L++PT+ P K++ + A + LV ++SG +
Sbjct: 274 VKAQLTQELDALLDKYDALILPTLPQIPPKVSEAENTVAFLNLTGLVRPF--NLSGHPAI 331
Query: 430 AIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
++P+ P+ + ++ H D+ L D++Q
Sbjct: 332 SVPLETSEGLPVGLQIVSKHQKDEQLCAITKFCVDAMQ 369
>gi|383773292|ref|YP_005452358.1| putative Glu-tRNA amidotransferase [Bradyrhizobium sp. S23321]
gi|381361416|dbj|BAL78246.1| putative Glu-tRNA amidotransferase [Bradyrhizobium sp. S23321]
Length = 449
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 121/405 (29%), Positives = 188/405 (46%), Gaps = 47/405 (11%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA AG+ +IKD+FD++G VT GS D AE+ A V L K G IG+T
Sbjct: 66 AAPSRYAGIPVSIKDLFDIRGQVTRAGSRALD-DSAPAEQDAATVARLRKAGFVVIGRTN 124
Query: 128 LDEFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
+ EFA+ G N HYGTP + H+PGGSSSG+AV+V + ALGTDT G R+
Sbjct: 125 MTEFAYSGIGINPHYGTPKGAWNRAEGHVPGGSSSGAAVSVLDGMAHGALGTDTGGSCRI 184
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAV----E 241
PA++ GI+GY+P+ V + G +P S SLD++G LAR+ S + VL V
Sbjct: 185 PAAYNGIVGYKPTQRRVPLDGSVPLSFSLDSIGPLARSVSCCAILDAVLANEPIVPLKPR 244
Query: 242 PRRARRL-----IFADDIFQLSKVPKLKTIHVISKAIESLSGYQN-PEHMNVGQYIASNV 295
P + RL I DD+ + +A++SL+ + E + + ++
Sbjct: 245 PVKGMRLAVPTTIALDDL-------DAEVSATFERALKSLADHGAIIERIEMAEF----- 292
Query: 296 PSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLE 355
P N A S + RY + + + PR+ + E
Sbjct: 293 --------HDIGPMNAKGGFAASES--YAWHRYLLTSKGDVY----DPRVSVRILRG--E 336
Query: 356 AINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLK---LNTKKTYSAEFHD 412
A + D I +L + R+ + RL D LV+PT ++ P K L K ++ E +
Sbjct: 337 A-QSAADYIDLLNERRSLIARVNARLAPYDA-LVLPTTANTPPKIADLADDKAFTTE-NL 393
Query: 413 RTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
R L ++ +M C +++P + E P+ + G D+ + +
Sbjct: 394 RALRNCTLINMIDGCAISLPAHREGEIPVGLMVAGAGGSDRRIFE 438
>gi|126666927|ref|ZP_01737903.1| amidase [Marinobacter sp. ELB17]
gi|126628643|gb|EAZ99264.1| amidase [Marinobacter sp. ELB17]
Length = 455
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 122/402 (30%), Positives = 186/402 (46%), Gaps = 35/402 (8%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAGL A+K +FDV G VT GS WK+ A+ A++V+ L GA G T + EFA
Sbjct: 81 LAGLPIALKALFDVAGEVTHSGSKWWKQ---IAQSDALIVSRLRSAGAVVTGHTNMTEFA 137
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+ G N HYG+P NP P I GGSSSG+A AVA + A+GTDT G VR+PA+FCG+
Sbjct: 138 YSGLGLNPHYGSPANPLAPGRICGGSSSGAASAVAQGMAVAAIGTDTGGSVRIPAAFCGL 197
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL----LQLNAVEPRRARRL 248
+G++PS + GV P S +LD++G +AR+ R+ VL Q +A R RR
Sbjct: 198 VGFKPSQQRIPRQGVFPLSNTLDSIGPIARSVECCARIDAVLAGQRWQPSAPVGLRGRRF 257
Query: 249 IFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSP 308
+ + F L V + S++++ L Q + + P L L P
Sbjct: 258 VVPTN-FMLDDV-SVAVSAAFSRSLQQLRDCG-------AQIVEAPAPVLDAL------P 302
Query: 309 ENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILY 368
E L A + E I+ +W++ V R+ + + L
Sbjct: 303 E-----LLAGGGFTAA----ESYHIHRDWLQQHGDEYDPRVRMRMERGAGISAADYLELV 353
Query: 369 KVRNEMRAALQRLLKDDKILVIPTVS-DPPL--KLNTKKTYSAEFHDRTLVLSSIGSMSG 425
+ R L L+ PTV +PPL +L T + Y A + L ++ ++
Sbjct: 354 RCRAARIKQADEWLASYDGLLAPTVPIEPPLLTELETDEDY-ARLNLLILRNPTVANLLD 412
Query: 426 CCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
C + +P + + P + + +G D LL+T + L+
Sbjct: 413 LCAITLPNHRSGDVPSGLMLVGRNGADTALLNTAQAMEKGLE 454
>gi|152994400|ref|YP_001339235.1| amidase [Marinomonas sp. MWYL1]
gi|150835324|gb|ABR69300.1| Amidase [Marinomonas sp. MWYL1]
Length = 423
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 101/178 (56%), Gaps = 6/178 (3%)
Query: 57 ELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLL 116
EL + +P + PL G +IKD+F V+GY T GS D A+ A V L
Sbjct: 37 ELFDYVEPQ----QGPLNGAIISIKDLFQVQGYKTQAGSV--FLDGSLAQEDAEAVVALR 90
Query: 117 KNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALG 176
K GA+ +G T + E A+ G N HYGTP NP I GGS+SG A +VA + D ALG
Sbjct: 91 KAGASLLGHTNMTELAYSGLGLNPHYGTPDNPINAGRITGGSTSGGAASVALGVADAALG 150
Query: 177 TDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL 234
TDT G +R+PA FCG+ G++PS TVS G LP S SLD+VG +A+ + +L
Sbjct: 151 TDTGGSLRIPAGFCGLTGFKPSQQTVSRKGCLPLSNSLDSVGPIAKTVEECELLWQIL 208
>gi|325676656|ref|ZP_08156332.1| amidase [Rhodococcus equi ATCC 33707]
gi|325552546|gb|EGD22232.1| amidase [Rhodococcus equi ATCC 33707]
Length = 446
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 171/395 (43%), Gaps = 33/395 (8%)
Query: 66 PPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGK 125
P P +GL+ A+ D+F ++G G G+P W TA V LL GAT G
Sbjct: 68 PATGSGPTSGLRVAVTDLFAIEGQRIGAGNPAWLGQAGTETATADSVARLLAGGATVAGI 127
Query: 126 TVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
F FG +G N YGTP N +PGG++SG++ AVA + LG DT G +R+
Sbjct: 128 AQTVGFGFGHSGINTSYGTPPNAAASGRVPGGATSGASTAVARRTATVGLGPDTTGSIRI 187
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRA 245
PA++ G+ G+ P+HG VS G +P S++ D VG + +A L VG LL +A E
Sbjct: 188 PAAYQGLYGFGPTHGAVSTAGAMPLSRTFDNVGWVCADAPTLATVGDALLP-SAPE---- 242
Query: 246 RRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQS 305
+ + ++ A Q + Q+ S +P L
Sbjct: 243 ---------IEFDAAVTWPGLLAVADA-----DVQPAVRAALAQWKRSGLPPL------- 281
Query: 306 TSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIK 365
T + A L ++++Q YE Y WV +A G E + + ++ +
Sbjct: 282 TEEDLDIAALPDWYDAVVAVQGYEAWQQYGGWVSTAT---GSVTDEARVNFLAASKVSAS 338
Query: 366 ILYKVRNEMRAALQ--RLLKDDKILVIPTVSD--PPLKLNTKKTYSAEFHDRTLVLSSIG 421
+ ++R A Q R ++L++PT P + + A T +L ++
Sbjct: 339 TYDRSLADVRRAAQTVRDFLGSRVLLLPTTGSAAPSSSDDPGSVHLAATLRTTGLLITVA 398
Query: 422 SMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+++G +P+ P+ +S I G D+ +L
Sbjct: 399 TVAGLPVATVPVRSEGGLPVGLSVIGPAGRDRDVL 433
>gi|157372138|ref|YP_001480127.1| amidase [Serratia proteamaculans 568]
gi|157323902|gb|ABV42999.1| Amidase [Serratia proteamaculans 568]
Length = 449
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 98/153 (64%), Gaps = 3/153 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ ++KD+FDV G T GS D A A VV LL+ GA IGKT + EFA
Sbjct: 70 LDGVPVSVKDLFDVAGEATAAGS-RVLADAPVANNHAAVVAQLLQAGAVVIGKTNMTEFA 128
Query: 133 FGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
+ G N HYGTP NP + IPGGSSSG+AVAVA + A+G+DT G VR+PA+FC
Sbjct: 129 YSGLGINPHYGTPANPWDRPAGRIPGGSSSGAAVAVADGMCFGAIGSDTGGSVRIPAAFC 188
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
G+ GY+P+ +S G+LP S SLD++G++A +
Sbjct: 189 GLTGYKPTARRISSRGLLPLSPSLDSIGVIAHD 221
>gi|374574268|ref|ZP_09647364.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Bradyrhizobium sp. WSM471]
gi|374422589|gb|EHR02122.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Bradyrhizobium sp. WSM471]
Length = 449
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/399 (29%), Positives = 187/399 (46%), Gaps = 47/399 (11%)
Query: 74 AGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAF 133
AG+ +IKD+FD+KG VT GS D AE+ A V L K G IG+T + EFA+
Sbjct: 72 AGIPVSIKDLFDIKGQVTRAGSRALD-DSSPAEQDAPTVARLRKAGFVVIGRTNMTEFAY 130
Query: 134 GITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
G N HYGTP + H+PGGSSSG+AV+V + ALGTDT G R+PA++ G
Sbjct: 131 SGIGINPHYGTPKGAWNRAEGHVPGGSSSGAAVSVLDGMAHGALGTDTGGSCRIPAAYNG 190
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ--LNAVEPRRARRLI 249
++GY+P+ V + G +P S SLD++G LAR+ S + VL + ++PR + +
Sbjct: 191 VVGYKPTQRRVPLDGAVPLSFSLDSIGPLARSVSCCAILDAVLANEPIAPLKPRSVKGMR 250
Query: 250 FA-------DDIFQLSKVPKLKTIHVISKAIESLSGYQN-PEHMNVGQYIASNVPSLKGL 301
A DD+ +A++SL+ + E + + ++
Sbjct: 251 LAVPTTIALDDL-------DAAVAGTFERALKSLADHGAIIERIEMAEF----------- 292
Query: 302 RAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQ 361
P N A S + RY + + + PR+ + EA +
Sbjct: 293 --HDIGPMNAKGGFAASES--YAWHRYLLTSKGDVY----DPRVSVRIMRG--EA-QSAA 341
Query: 362 DNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLK---LNTKKTYSAEFHDRTLVLS 418
D I +L + R+ + R+ D LV+PT ++ P K L K ++ E + R L
Sbjct: 342 DYIDLLNERRSLITRVNARIAPYDA-LVLPTTANTPPKISDLADDKEFTRE-NLRALRNC 399
Query: 419 SIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
++ +M C +++P + E P+ + G D+ + +
Sbjct: 400 TLINMIDGCAISLPAHREGEIPVGLMLAGAGGSDRRIFE 438
>gi|403675209|ref|ZP_10937390.1| Glu-tRNA amidotransferase [Acinetobacter sp. NCTC 10304]
Length = 369
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 119/398 (29%), Positives = 188/398 (47%), Gaps = 49/398 (12%)
Query: 76 LKFAIKDVFDVKGYVTGFGSP---DWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LK +KD D++G T GS + + H +AE VV +LK IGKT L E A
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLEVEPAHDDAE----VVKNILKADCEIIGKTNLHELA 70
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
FGITG N +GTP+NP+ P IPGGSSSGSA AVAA+ DF LGTDT G +R+PA+ CG+
Sbjct: 71 FGITGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGV 130
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G +P+ G VS GV P S SLD VG A + ++ + ++ D
Sbjct: 131 FGLKPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKAMQII-----------------D 173
Query: 253 DIF---QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
F + + PKL + V + + YQ + N+ +
Sbjct: 174 PTFKPAECTLTPKLAVLDVKADEVVWNCIYQALQKANLETVLEK---------------- 217
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
+A + + YE + E ++ +G +V R+L+A TT + +K
Sbjct: 218 --VEHFEAAYDAGMQIINYENWQAFGELTQTG--LIGSDVNNRLLKAAQTTLEQVKQAEV 273
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
V+ ++ L LL+ LV+PT+ P K++ + + F + T ++ ++SG +
Sbjct: 274 VKAQLTEELDALLEKYDALVLPTLPRIPPKVSEAEN-TVTFLNLTGLVRPF-NLSGHPAI 331
Query: 430 AIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
++P+ P+ + ++ H D+ L D++Q
Sbjct: 332 SVPLETSEGLPVGLQIVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|149195256|ref|ZP_01872345.1| glutamyl-tRNA amidotransferase subunit A [Caminibacter
mediatlanticus TB-2]
gi|149134598|gb|EDM23085.1| glutamyl-tRNA amidotransferase subunit A [Caminibacter
mediatlanticus TB-2]
Length = 451
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/446 (25%), Positives = 199/446 (44%), Gaps = 48/446 (10%)
Query: 35 LRRRRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFG 94
L++ N K G ++E+F + G+ AIKD +VKG+
Sbjct: 18 LKKDINKKAKEEKSLGGYIEQFLDSDLAESGD--------GVPIAIKDNINVKGWEITCA 69
Query: 95 SPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHI 154
S K ++A A V+ + +NG + G+ +DEFA G + E YG +NP P+ +
Sbjct: 70 SKILK--GYKAPYNATVIDKMFENGLSAYGRCNMDEFAMGSSTETSQYGKTLNPHNPNRV 127
Query: 155 PGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSL 214
PGGSS GSA V A L ALG+DT G +R PA+FCG++G +P++G VS G++ S SL
Sbjct: 128 PGGSSGGSAAVVGANLAIAALGSDTGGSIRQPAAFCGVVGMKPTYGRVSRYGLVAFSSSL 187
Query: 215 DTVGLLARN---ASILH--------------RVGHVLLQLNAVEPRRARRLIFADDIFQL 257
D +G + +N A+IL+ R+ H +++N E R+ + + + I +
Sbjct: 188 DQIGPITQNVEDAAILYNIIAGYDKNDSTSARIDHTPVEIN--ENRKLKIAVIDNYIDEA 245
Query: 258 SKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTATLKA 317
K + VI G + H + + + ++ + +T+ ++ L
Sbjct: 246 DNEIKNAILDVI-------KGLEKEGHTIIHKNLMNSKIDVATYYVVATA--EASSNLAR 296
Query: 318 LSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILY-----KVRN 372
M R E K + E + K + + G V R++ Y KVR+
Sbjct: 297 FDG-MRYGNRIEGKDLKETY-KLTRAQFGDEVKRRIMLGTFVLSSGYYDAYYIKAQKVRH 354
Query: 373 EMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIP 432
++ +L + +++ P + +KK E + + S+ +++G +++P
Sbjct: 355 IIKNEFDKLFAEADVIITPVTPTTAFEFGSKKD-PLEMYLSDIYTISV-NLAGVPAISLP 412
Query: 433 IGKYNEH-PISISFITYHGGDKFLLD 457
I K E PI + I H ++ L D
Sbjct: 413 IAKDKESMPIGMQIIAKHFDEQSLFD 438
>gi|312138921|ref|YP_004006257.1| amidase [Rhodococcus equi 103S]
gi|311888260|emb|CBH47572.1| putative secreted amidase [Rhodococcus equi 103S]
Length = 446
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 170/395 (43%), Gaps = 33/395 (8%)
Query: 66 PPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGK 125
P P +GL+ A+ D+F ++G G G+P W TA V LL GAT G
Sbjct: 68 PATGSGPTSGLRVAVTDLFAIEGQRIGAGNPAWLGQAATETATADSVARLLAGGATVAGI 127
Query: 126 TVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
F FG +G N YGTP N +PGG++SG++ AVA + LG DT G +R+
Sbjct: 128 AQTVGFGFGHSGINTSYGTPPNAAASGRVPGGATSGASTAVARRTATVGLGPDTTGSIRI 187
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRA 245
PA++ G+ G+ P+HG VS G +P S++ D VG + +A L VG LL +A E
Sbjct: 188 PAAYQGLYGFGPTHGAVSTAGAMPLSRTFDNVGWVCADAPTLATVGDALLP-SAPE---- 242
Query: 246 RRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQS 305
+ + ++ A Q + Q+ S +P L
Sbjct: 243 ---------IEFDAAVTWPGLLAVADA-----DVQPAVRAALAQWKRSGLPPLA------ 282
Query: 306 TSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIK 365
+ A L ++++Q YE Y WV +A G E + + ++ +
Sbjct: 283 -EEDLDIAALPDWYDAVVAVQGYEAWQQYGGWVSTAT---GSVTDEARVNFLAASKVSAS 338
Query: 366 ILYKVRNEMRAALQ--RLLKDDKILVIPTVSD--PPLKLNTKKTYSAEFHDRTLVLSSIG 421
+ ++R A Q R ++L++PT P + + A T +L ++
Sbjct: 339 TYDRSLADVRRAAQTVRDFLGSRVLLLPTTGSAAPASSDDPGSVHLAATLRTTGLLITVA 398
Query: 422 SMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+++G +P+ P+ +S I G D+ +L
Sbjct: 399 TVAGLPVATVPVRSEGGRPVGLSVIGPAGRDRDVL 433
>gi|227818637|ref|YP_002822608.1| allophanate hydrolase [Sinorhizobium fredii NGR234]
gi|36958892|gb|AAQ87317.1| Allophanate hydrolase [Sinorhizobium fredii NGR234]
gi|227337636|gb|ACP21855.1| predicted amidase [Sinorhizobium fredii NGR234]
Length = 601
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/171 (43%), Positives = 102/171 (59%), Gaps = 3/171 (1%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
+PL G+ FA+KD DV G T PD+ + AER A VV LL + GA +GKT LD+
Sbjct: 66 KPLWGIPFAVKDNIDVAGMPTTAACPDYA---YLAERDATVVRLLREAGALVVGKTNLDQ 122
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FA G+ G Y P N P+ +PGGSSSGSAVA A +V FALGTDT G R+PA
Sbjct: 123 FATGLVGVRTPYPAPRNAIDPALVPGGSSSGSAVATAHGIVSFALGTDTAGSGRIPAGLN 182
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVE 241
I+G +PS G +S GV+P ++LD V + A + +++ V + +A +
Sbjct: 183 NIVGLKPSIGALSTTGVVPACRTLDCVSIFALAVADAYQIFQVAARPDATD 233
>gi|298292829|ref|YP_003694768.1| amidase [Starkeya novella DSM 506]
gi|296929340|gb|ADH90149.1| Amidase [Starkeya novella DSM 506]
Length = 480
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 95/151 (62%), Gaps = 2/151 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAG+ F+ KDVFD T GS + D+ A R A + L +GA +GK L EF
Sbjct: 68 LAGIPFSCKDVFDTVTLPTTAGSRAMQ-DYRPA-RDAQALARLRVSGAILLGKNNLHEFC 125
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+GITG N +GTP NP + GGSSSGSAVAV + FALGTDT G VRVPAS CG+
Sbjct: 126 YGITGANPTFGTPANPHDRHRLAGGSSSGSAVAVTNRTAMFALGTDTGGSVRVPASLCGL 185
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
+G++P+ G +S+ GV+P SLD G+L R+
Sbjct: 186 VGFKPTRGQISLKGVVPFCWSLDHAGILTRS 216
>gi|226355863|ref|YP_002785603.1| Amidase [Deinococcus deserti VCD115]
gi|226317853|gb|ACO45849.1| putative Amidase [Deinococcus deserti VCD115]
Length = 398
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 107/175 (61%), Gaps = 8/175 (4%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL+GL F++KD+F V G+ + R +V+V LL GA+ GKT L E
Sbjct: 38 PLSGLTFSVKDLFGVPGWPLAAST----RAAVADPGPSVLVQQLLALGASATGKTHLHEI 93
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A GITG N + GT +P P +PGGSS G+AV+VA VDFALGTDT G +RVPA++CG
Sbjct: 94 ALGITGLNGYGGT-SHPFEPQRLPGGSSGGAAVSVALNQVDFALGTDTGGSIRVPAAWCG 152
Query: 192 ILGYRPS--HGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRR 244
++GY+P+ H S GVLP S + D G LAR+ + + RV H L V+P+R
Sbjct: 153 VVGYKPTKGHAAWSTEGVLPLSWTCDHAGPLARDLATVVRV-HEALTGATVQPQR 206
>gi|421625224|ref|ZP_16066079.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii OIFC098]
gi|408699405|gb|EKL44884.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii OIFC098]
Length = 369
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 187/398 (46%), Gaps = 49/398 (12%)
Query: 76 LKFAIKDVFDVKGYVTGFGSP---DWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LK +KD D++G T GS + + H +AE VV +LK IGKT L E A
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSKALLEVEPAHDDAE----VVKNILKADCEIIGKTNLHELA 70
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
FGITG N +GTP+NP+ P IPGGSSSGSA AVAA+ DF LGTDT G +R+PA+ CG+
Sbjct: 71 FGITGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGV 130
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G +P+ G VS GV P S SLD VG A + ++ + ++ D
Sbjct: 131 FGLKPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKAMQII-----------------D 173
Query: 253 DIFQLSK---VPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
F+ ++ PKL + V + + YQ + N+ +
Sbjct: 174 PTFKPAECTFTPKLAVLDVKADEVVWNCIYQALQKANLETVLEK---------------- 217
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
+A + + YE + E ++ +G +V R+L+A +TT + +K
Sbjct: 218 --VEHFEAAYDAGMQIINYENWQAFGELTQTG--LIGSDVNGRLLKAAHTTLEQVKQAEA 273
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
V+ ++ L LL+ LV+PT+ P K++ + A + LV ++SG +
Sbjct: 274 VKAQLTKELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPF--NLSGHPAI 331
Query: 430 AIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
++P+ P+ + ++ H D+ L D +Q
Sbjct: 332 SVPLETSEGLPVGLQIVSKHQKDEQLCAIAKFCIDVMQ 369
>gi|386396705|ref|ZP_10081483.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Bradyrhizobium sp. WSM1253]
gi|385737331|gb|EIG57527.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Bradyrhizobium sp. WSM1253]
Length = 449
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 188/405 (46%), Gaps = 47/405 (11%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA AG+ +IKD+FD+KG VT GS D AE+ A V L K G IG+T
Sbjct: 66 AAPSRYAGIPVSIKDLFDIKGQVTRAGSRALD-DSSPAEQDAPTVARLRKAGFVVIGRTN 124
Query: 128 LDEFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
+ EFA+ G N HYGTP + H+PGGSSSG+AV+V + ALGTDT G R+
Sbjct: 125 MTEFAYSGIGINPHYGTPKGAWNRAEGHVPGGSSSGAAVSVLDGMAHGALGTDTGGSCRI 184
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ--LNAVEPR 243
PA++ GI+GY+P+ V + G +P S SLD++G LAR+ S + VL + ++PR
Sbjct: 185 PAAYNGIVGYKPTQRRVPLDGAVPLSFSLDSIGPLARSVSCCAILDAVLANEPIAPLKPR 244
Query: 244 RARRLIFA-------DDIFQLSKVPKLKTIHVISKAIESLSGYQN-PEHMNVGQYIASNV 295
+ + A DD+ +A+++L+ + E + + ++
Sbjct: 245 PVKGMRLAVPTTIALDDL-------DAAVAGTFERALKTLADHGAIIERIEMAEF----- 292
Query: 296 PSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLE 355
P N A S + RY + + + PR+ + +
Sbjct: 293 --------HDIGPMNAKGGFAASES--YAWHRYLLTSKGDVY----DPRVSVRIMRGEAQ 338
Query: 356 AINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLK---LNTKKTYSAEFHD 412
+ D I +L + R+ + R+ D LV+PT ++ P K L K ++ E +
Sbjct: 339 ---SAADYIDLLNERRSLIARVNARIAPYDA-LVLPTTANTPPKIADLADDKAFTRE-NL 393
Query: 413 RTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
R L ++ +M C +++P + E P+ + G D+ + +
Sbjct: 394 RALRNCTLINMIDGCAISLPAHREGEIPVGLMLAGAGGSDRRIFE 438
>gi|320450505|ref|YP_004202601.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Thermus scotoductus
SA-01]
gi|320150674|gb|ADW22052.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Thermus scotoductus
SA-01]
Length = 471
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 125/412 (30%), Positives = 192/412 (46%), Gaps = 39/412 (9%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAGL A+KD KG T GS + E TAV L GA IGKT LDEF
Sbjct: 57 PLAGLVVAVKDNIVTKGIPTTAGSRLLEGFLPPYEATAVARLKAL--GALVIGKTNLDEF 114
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
G + E+ + NP P+ +PGGSS GSAVAVAA L ALG+DT G VR PA+FCG
Sbjct: 115 GMGSSTEHSAFFPSRNPFDPTRVPGGSSGGSAVAVAADLAPLALGSDTGGSVRQPAAFCG 174
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRL--- 248
I G +P++G VS G++ + SLD +G +AR+ + + ++ ++ +P A L
Sbjct: 175 IYGLKPTYGRVSRYGLIAYASSLDQIGPMARS---VRDLALLMDAISGPDPLDATSLDLK 231
Query: 249 -IFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
F + + +L +P L+ + V+ E+LSG N + A V GL+ + S
Sbjct: 232 PRFQEALAEL--LPSLR-LGVVR---EALSG--NSPGVEGALRQALEVFRGLGLQVKEVS 283
Query: 308 PENGTATLKAL-----SSVMLSLQRYE-----FKTIYEE-W--VKSAKPRLGYNVFERVL 354
+ L A + +L RY+ ++ EE W ++ + R G V R+L
Sbjct: 284 WPSLPLALNAYYILAPAEASSNLARYDGTLFGYRAEGEELWRVLEETRARFGLEVKRRIL 343
Query: 355 EAINTTQDNIKILY-----KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAE 409
Y R ++A Q L ++ +L++PT P L + A
Sbjct: 344 VGTFVLSSGYYEAYYGRAQAFRGRLKAEAQALFQEVDLLLLPTTPHPAFPLGGRPDPLAM 403
Query: 410 FHDRTLVLSSIGS-MSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVL 460
+ + L ++G+ ++G ++ P G + P+ + D+ LL L
Sbjct: 404 YRED---LYTVGANLAGLPALSFPAGFEDGLPVGLQLFAPWARDELLLQAAL 452
>gi|293607950|ref|ZP_06690253.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|427425982|ref|ZP_18916054.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii WC-136]
gi|292828523|gb|EFF86885.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|425697314|gb|EKU66998.1| putative aspartyl/glutamyl-tRNA amidotransferase subunit A
[Acinetobacter baumannii WC-136]
Length = 369
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 186/395 (47%), Gaps = 43/395 (10%)
Query: 76 LKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGI 135
LK +KD D++G T GS + A+ A VV +LK I KT L E AFGI
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRAL-LNVEPAQDDAEVVKNILKADCEIIAKTNLHELAFGI 73
Query: 136 TGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGY 195
TG N +GTP+NP+ P IPGGSSSGSA AVAA+ DF LGTDT G +R+PA+ CG+ G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVFGL 133
Query: 196 RPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIF 255
+P+ G VS GV P S SLD VG A + ++ + ++ D F
Sbjct: 134 KPTFGRVSRKGVYPPSSSLDCVGPFANSVEMIEKAMQII-----------------DPTF 176
Query: 256 ---QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGT 312
+ + PKL + V + + +Q + N+ +
Sbjct: 177 KPTEFTSAPKLAVLDVSADEVVWNCIHQALQKANLDTTLEK------------------V 218
Query: 313 ATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRN 372
+A + + YE + E ++ +G +V R+L+A +TT + +K VR
Sbjct: 219 EYFEAAYDAGMQIINYENWQAFGELTETG--LIGSDVNGRLLKAAHTTLEQVKQAEVVRA 276
Query: 373 EMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIP 432
++ L LL+ LV+PT+ P K++ + A F + T ++ ++SG +++P
Sbjct: 277 QLTQELDALLEKYDALVLPTLPQIPPKVSEAENTVA-FLNLTALVRPF-NLSGHPAISVP 334
Query: 433 IGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
+ P+ + ++ H D+ L D++Q
Sbjct: 335 LETSEGLPVGLQIVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|456356560|dbj|BAM91005.1| amidase [Agromonas oligotrophica S58]
Length = 450
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 190/409 (46%), Gaps = 55/409 (13%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA P AG+ ++KD+FD+KG VT GS + D A+ A VV L + G IG+T
Sbjct: 67 AAPSPFAGIPVSVKDLFDIKGQVTRAGSRALE-DSAPADADAPVVARLRRAGFVVIGRTN 125
Query: 128 LDEFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
+ EFA+ G N HYGTP + + H+PGGSSSG+AV+V ++ ALGTDT G R+
Sbjct: 126 MTEFAYSGIGINPHYGTPKSAWKRDIGHVPGGSSSGAAVSVVDRMAYGALGTDTGGSCRI 185
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL----LQLNAVE 241
PA+F GI+GY+P+ V + G +P S +LD+ G LA + + VL ++ A
Sbjct: 186 PAAFNGIVGYKPTQARVPLDGGVPLSTTLDSFGPLANTVACCAVLDSVLADEPIRPLARR 245
Query: 242 PRRARRL-----IFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVP 296
P + RL + D++ + + +++ + PE ++VG +
Sbjct: 246 PVKGLRLAVPTTVVLDELDAEVAETFERALDTLARQGALIERIAFPEFLDVG------II 299
Query: 297 SLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEA 356
+KG A + S + R+ + + + PR+ + EA
Sbjct: 300 GMKGGFAAAES---------------YAWHRFLLASKGDVY----DPRVSVRIARG--EA 338
Query: 357 INTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLV 416
I T D I++L R+ + A R+ D LV+PT + N + D+
Sbjct: 339 I-TVPDYIEMLNGRRSLVTRAAARIAPYDA-LVMPTTA------NAAPVIADLADDQVFA 390
Query: 417 LSSIGSMSGC--------CQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
+I S+ C C +++P ++ E P+ + G D+ LL+
Sbjct: 391 RENIRSLRNCTFINMIDGCAISLPAHRHGEVPVGLMLAQSGGNDRKLLE 439
>gi|291434939|ref|ZP_06574329.1| amidase [Streptomyces ghanaensis ATCC 14672]
gi|291337834|gb|EFE64790.1| amidase [Streptomyces ghanaensis ATCC 14672]
Length = 434
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 119/391 (30%), Positives = 174/391 (44%), Gaps = 30/391 (7%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L+G + A+KD+F V G+ G G+P W R+ A V LL+ GA G DE A
Sbjct: 61 LSGSRVAVKDLFAVAGHAIGAGNPAWLREAPIESAHAAAVQALLQAGADVTGIARADELA 120
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+G++G N HYG P NP P +PGGSSSGSA AVA L D LGTDT G VRVP S+CG+
Sbjct: 121 YGLSGLNTHYGMPPNPAAPGRVPGGSSSGSASAVALGLADIGLGTDTAGSVRVPTSYCGL 180
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
RPSHG V G + + S DTV + R +L RV VLL +P +RL+ A
Sbjct: 181 YSLRPSHGLVPDTGQIGLAPSFDTVSWITRTPQLLSRVSDVLLPRRPAQP--IKRLLLAT 238
Query: 253 DIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGT 312
D+F L P L+ P H + A + A P + T
Sbjct: 239 DLFDLVD-PALRL----------------PLH-DAAHAWADRL-------AVPLQPRSST 273
Query: 313 --ATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKV 370
A L+ + + LQ E ++ W+++ + + V + + + +
Sbjct: 274 CAAHLEEWAEALGVLQAVEMWQLHGSWLQTHREAVSPLVADAIAAGEGMPAEYLAWARDT 333
Query: 371 RNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVA 430
++ R+ L L+ LV P T A T+ L S++G +
Sbjct: 334 VSQARSTLAELIPPGTALVQPAAPTAAPLPGPAVTGMA-LRTATVQLICAASVAGLPVLT 392
Query: 431 IPIGKYNEHPISISFITYHGGDKFLLDTVLD 461
+P + P+ +S + G D+ L + D
Sbjct: 393 LPGVQSPAGPVGLSLVATAGSDRALTAALAD 423
>gi|421650552|ref|ZP_16090928.1| amidase [Acinetobacter baumannii OIFC0162]
gi|425750793|ref|ZP_18868748.1| amidase [Acinetobacter baumannii WC-348]
gi|445459234|ref|ZP_21447505.1| amidase [Acinetobacter baumannii OIFC047]
gi|408510187|gb|EKK11850.1| amidase [Acinetobacter baumannii OIFC0162]
gi|425485250|gb|EKU51647.1| amidase [Acinetobacter baumannii WC-348]
gi|444774445|gb|ELW98529.1| amidase [Acinetobacter baumannii OIFC047]
Length = 369
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 119/398 (29%), Positives = 187/398 (46%), Gaps = 49/398 (12%)
Query: 76 LKFAIKDVFDVKGYVTGFGSP---DWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LK +KD D++G T GS + + H +AE VV +LK IGKT L E A
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLEVEPAHDDAE----VVKNILKADCEIIGKTNLHELA 70
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
FGITG N +GTP+NP+ P IPGGSSSGSA AVAA+ DF LGTDT G +R+PA+ CG+
Sbjct: 71 FGITGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGV 130
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G +P+ G VS G+ P S SLD VG A + ++ + ++ D
Sbjct: 131 YGLKPTFGRVSREGIYPPSSSLDCVGPFANSVEMIEKAMQII-----------------D 173
Query: 253 DIF---QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
F + + PKL + V + + YQ + N+ +
Sbjct: 174 PTFKPAECTLTPKLAVLDVKADEVVWNCIYQALQKANLETVLEK---------------- 217
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
+A + + YE + E ++ +G +V R+L+A +TT + +K
Sbjct: 218 --VEHFEAAYDAGMQIINYENWQAFGELTQTG--LIGSDVNNRLLKAAHTTLEQVKQAEV 273
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
V+ ++ L LL+ LV+PT+ P K++ + A + LV ++SG +
Sbjct: 274 VKAQLTKELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPF--NLSGHPAI 331
Query: 430 AIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
++P+ P+ + ++ H D+ L D++Q
Sbjct: 332 SVPLETSEGLPVGLQIVSKHQKDEQLCVIAKFCVDAMQ 369
>gi|254560151|ref|YP_003067246.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Methylobacterium
extorquens DM4]
gi|254267429|emb|CAX23268.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Methylobacterium
extorquens DM4]
Length = 616
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 143/490 (29%), Positives = 217/490 (44%), Gaps = 85/490 (17%)
Query: 30 VLAETLRRRRNPKLNGRVDFGAFL------ERFE----LIPFPQPPPPAARQPLAGLKFA 79
VLAET RR L D G FL E F L PF A +PL G+ FA
Sbjct: 23 VLAETYRR-----LAAIDDPGIFLTLLPEAETFAAAAALGPFDP-----AEKPLWGVPFA 72
Query: 80 IKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGEN 139
+KD DV G T PD+ E TA V LL GA IGKT LD+FA G+ G
Sbjct: 73 VKDNLDVVGLPTTAACPDFAFVPSE---TAPCVARLLAAGAILIGKTNLDQFATGLVGLR 129
Query: 140 KHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSH 199
+ P N +PGGSSSGSAVAVA LV FALGTDT G RVPA ++G +PS
Sbjct: 130 TPHPAPRNALNADLVPGGSSSGSAVAVAHGLVAFALGTDTAGSGRVPAGLNNVVGLKPSL 189
Query: 200 GTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIFQLSK 259
G+VS G+LP ++LDTV + A + RV ++ +A +P ++ D+ ++
Sbjct: 190 GSVSSRGLLPACRTLDTVSVFAGTVADADRVFRIMAGYDAADP-------YSRDLPVTTQ 242
Query: 260 VPKLKT-IHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPEN-GTATLKA 317
P L + V SL +P ++ ++A L L + P+ A + A
Sbjct: 243 PPGLPPGLRVGMPDAASLRFGGDP--LSEAAFVA----GLDDLATLTGRPDAVDLAPMFA 296
Query: 318 LSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNI------------- 364
+++++ Y+ + E + ++ +P + ER +A++ T +
Sbjct: 297 IAALL-----YDGPWVAERY-QAVRP-----LIERSPQALHPTTRAVIGRATAFTAADAF 345
Query: 365 KILYKVRNEMRAALQRLLKDDKILVIPTVSDP---------PLKLNTKKTYSAEFHDRTL 415
LY++ E+R A L + +LV+PT P P+ N++ F +
Sbjct: 346 AGLYRL-AELRRAADTLWEHIDVLVVPTYPRPVTCAELEVDPIGPNSELGTYTNFVN--- 401
Query: 416 VLSSIGSMSGCCQVAIPIGKYNEH--PISISFITYHGGDKFLLDTVLDLYDSLQEQVNIA 473
+ C +A+P G++ P ++ I G D L L+ + + +
Sbjct: 402 -------LLDLCALAVP-GRFRTDGLPAGLTLIAPRGRDGLLAALGARLHAAAGVPIGTS 453
Query: 474 SNLVPLPDTN 483
VP+P+
Sbjct: 454 GEPVPVPEAG 463
>gi|445415424|ref|ZP_21434113.1| amidase [Acinetobacter sp. WC-743]
gi|444763079|gb|ELW87422.1| amidase [Acinetobacter sp. WC-743]
Length = 370
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 187/383 (48%), Gaps = 40/383 (10%)
Query: 75 GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFG 134
LK +KD D++G T GS + A + A VV +L GKT L E AFG
Sbjct: 14 ALKVMVKDSIDIQGMKTMAGS-QALMNTPAATQNAEVVDRILAADCQITGKTNLHELAFG 72
Query: 135 ITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILG 194
ITG N H+GT +NP+ P IPGGSSSGSA AVAA L DF LGTDT G +R+PA+ CG+ G
Sbjct: 73 ITGINHHFGTAINPKYPELIPGGSSSGSAAAVAAGLADFTLGTDTGGSIRMPAACCGVYG 132
Query: 195 YRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDI 254
+P+ VS GV P SLD VG A + +++ + ++P +
Sbjct: 133 LKPTFDRVSRQGVHPAVSSLDCVGPFAMSVNMIETAMQI------IDPSF-------HPL 179
Query: 255 FQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSP--ENGT 312
L++ PKL + V + A+ + QN Y+A+ +L ++++ P E G
Sbjct: 180 TDLAQAPKLAWLDVSADAV-VIESIQN--------YLANANLTLTKVKSKWFDPAFEAG- 229
Query: 313 ATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRN 372
+ + YE Y ++ +G +V R+L+A TT D ++ +++
Sbjct: 230 ----------MQIINYENWQAYAALTETG--LVGADVNGRLLKAAQTTMDQVQQAEQIKA 277
Query: 373 EMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIP 432
+A + LL L++PT+ P K++ + A + +LV ++SG ++IP
Sbjct: 278 NFKAEIDALLAQFDALILPTLPQIPPKVSEAENTVAFLNLTSLVRPF--NLSGHPAISIP 335
Query: 433 IGKYNEHPISISFITYHGGDKFL 455
+ + PI + + D++L
Sbjct: 336 LQTASGLPIGLQIVAKQNADEYL 358
>gi|374369303|ref|ZP_09627337.1| amidase [Cupriavidus basilensis OR16]
gi|373099216|gb|EHP40303.1| amidase [Cupriavidus basilensis OR16]
Length = 444
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 95/152 (62%), Gaps = 2/152 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAGL +IKD+FDV+G VT GS A+ A VV L GA IG+T + EF
Sbjct: 71 PLAGLPVSIKDLFDVRGQVTRAGSKALGGAPANAD--APVVARLRAAGAVLIGRTNMSEF 128
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
AF G N HYGTP P + I GGS+SG AV+VA + ALGTDT G +R+P++FCG
Sbjct: 129 AFSGLGLNPHYGTPRAPFDEARIAGGSTSGGAVSVALDMAVAALGTDTGGSIRIPSAFCG 188
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
+ G++P+ V + G +P S SLD+ G LAR+
Sbjct: 189 LTGFKPTASRVPLAGAVPLSTSLDSAGPLARS 220
>gi|410419939|ref|YP_006900388.1| amidase [Bordetella bronchiseptica MO149]
gi|427821660|ref|ZP_18988722.1| putative amidase [Bordetella bronchiseptica Bbr77]
gi|408447234|emb|CCJ58906.1| putative amidase [Bordetella bronchiseptica MO149]
gi|410586925|emb|CCN01954.1| putative amidase [Bordetella bronchiseptica Bbr77]
Length = 449
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/154 (48%), Positives = 97/154 (62%), Gaps = 3/154 (1%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R + GL +IKD+FDV G T GS ++ A R AVVV L GA +G+T +
Sbjct: 66 RSAIDGLPISIKDLFDVAGETTMAGSVA-RQGEPAAVRDAVVVRRLRAAGAVIVGRTNMT 124
Query: 130 EFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
EFA+ G N HYGTP NP + IPGGSSSG+AV+V + A+G+DT G VR+PA
Sbjct: 125 EFAYSGLGLNPHYGTPRNPWDRATGRIPGGSSSGAAVSVTDGMASGAIGSDTGGSVRIPA 184
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLA 221
+ CG+ G++PS VSM GVLP S +LD++G LA
Sbjct: 185 ALCGLAGFKPSAQRVSMQGVLPLSANLDSIGPLA 218
>gi|88602304|ref|YP_502482.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methanospirillum
hungatei JF-1]
gi|109891956|sp|Q2FQM9.1|GATA_METHJ RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|88187766|gb|ABD40763.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
[Methanospirillum hungatei JF-1]
Length = 431
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 188/408 (46%), Gaps = 34/408 (8%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL+G+ A+KD KG T S K + A VVTLL GA +GKT +DEF
Sbjct: 28 PLSGVTVAVKDNISTKGIETTCASKILK--GYIPPYDAHVVTLLKNAGAAIVGKTNMDEF 85
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
G T EN YG +NP +PGGSS GSA AVAA LVD A+G+DT G +R PA+FCG
Sbjct: 86 GMGTTTENSAYGPTLNPLDHQRVPGGSSGGSAAAVAAGLVDCAIGSDTGGSIRCPAAFCG 145
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL--------------LQL 237
I+G +P++G VS G++ + SL+ +G +AR+ L + V+ +
Sbjct: 146 IVGLKPTYGRVSRFGLIAYANSLEQIGPMARDVQTLSNLYSVIAGHDSRDATSVDKPYKH 205
Query: 238 NAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPS 297
N V ++ D+ F P + V+ +AI++L E M + +PS
Sbjct: 206 NPVSDITGLKIGVPDEFFGEGVNPNVA--EVVRQAIDTL------ESMGA-TAVPCTIPS 256
Query: 298 LK-GLRAQS-TSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLE 355
+K L A T ++ L V K+ ++ + + K G V R++
Sbjct: 257 MKYALSAYYVTCTSEASSNLARFDGVRYGPAVGTLKSWHDAYSEQRKAGFGKEVRRRIIL 316
Query: 356 AINTTQDNIKILY-----KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEF 410
+ Y R +R +R+ +D ++ PT+ D KL K +
Sbjct: 317 GTFSLAAGYYGRYYQKAQTARQMVRDDFERIFRDVDVIAGPTMPDIAFKLGEKSDPLQMY 376
Query: 411 HDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDT 458
L + + +++G +++P GK N P+ + I + D+ ++DT
Sbjct: 377 LSDILTVPA--NLAGVPALSVPCGKINSMPVGLQLIGRYFEDERIIDT 422
>gi|239504016|ref|ZP_04663326.1| Glutamyl-tRNA(Gln) amidotransferase subunit A(Glu-ADTsubunit A)
[Acinetobacter baumannii AB900]
gi|421679486|ref|ZP_16119358.1| amidase [Acinetobacter baumannii OIFC111]
gi|410391138|gb|EKP43514.1| amidase [Acinetobacter baumannii OIFC111]
Length = 369
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 187/398 (46%), Gaps = 49/398 (12%)
Query: 76 LKFAIKDVFDVKGYVTGFGSP---DWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LK +KD D++G T GS + + H +AE VV +LK IGKT L E A
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRALLEVEPAHDDAE----VVKNILKADCEIIGKTNLHELA 70
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
FGITG N +GTP+NP+ P IPGGSSSGSA AVAA+ DF LGTDT G +R+PA+ CG+
Sbjct: 71 FGITGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGV 130
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G +P+ G VS GV P S SLD VG A + ++ + ++ D
Sbjct: 131 YGLKPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKAMQII-----------------D 173
Query: 253 DIFQLSK---VPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
F+ ++ PKL + V + + YQ + N+ +
Sbjct: 174 PTFKPAECTLTPKLAVLDVKADEVVWNCIYQALQKANLETVLEK---------------- 217
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
+A + + YE + E ++ +G +V R+L+A +TT + +K
Sbjct: 218 --VEHFEAAYDAGMQIINYENWQAFGELTQTG--LIGSDVNNRLLKAAHTTLEQVKQAEV 273
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
V+ ++ L LL+ LV+PT+ P K++ + A + LV ++SG +
Sbjct: 274 VKAQLTKELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPF--NLSGHPAI 331
Query: 430 AIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
++P+ P+ + ++ H D L D++Q
Sbjct: 332 SVPLETSEGLPVGLQIVSKHQKDGQLCAIAKFCVDAMQ 369
>gi|410473301|ref|YP_006896582.1| amidase [Bordetella parapertussis Bpp5]
gi|408443411|emb|CCJ50065.1| putative amidase [Bordetella parapertussis Bpp5]
Length = 449
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/154 (48%), Positives = 97/154 (62%), Gaps = 3/154 (1%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R + GL +IKD+FDV G T GS ++ A R AVVV L GA +G+T +
Sbjct: 66 RSAIDGLPISIKDLFDVAGETTMAGSVA-RQGEPAAVRDAVVVRRLRAAGAVIVGRTNMT 124
Query: 130 EFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
EFA+ G N HYGTP NP + IPGGSSSG+AV+V + A+G+DT G VR+PA
Sbjct: 125 EFAYSGLGLNPHYGTPRNPWDRATGRIPGGSSSGAAVSVTDGMASGAIGSDTGGSVRIPA 184
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLA 221
+ CG+ G++PS VSM GVLP S +LD++G LA
Sbjct: 185 ALCGLAGFKPSAQRVSMQGVLPLSANLDSIGPLA 218
>gi|264680283|ref|YP_003280193.1| amidase [Comamonas testosteroni CNB-2]
gi|262210799|gb|ACY34897.1| Amidase [Comamonas testosteroni CNB-2]
Length = 454
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 98/157 (62%), Gaps = 5/157 (3%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
AR PL GL ++KD+FD+ G+ T G D A +TA VV L + GA +G T +
Sbjct: 66 ARSPLEGLPISVKDLFDIAGHPT-LGGSRLLADAAPATQTAEVVQRLRRAGAVIVGTTNM 124
Query: 129 DEFAFGITGENKHYGTPVNPQM----PSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVR 184
EFA+ G N HYGTP NP IPGGSSSG+A++V+ + A+G+DT G VR
Sbjct: 125 TEFAYSGLGLNPHYGTPRNPWQRDIDGGRIPGGSSSGAAISVSDGMALAAIGSDTGGSVR 184
Query: 185 VPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLA 221
+P++ CG+ G++P+ VSM GVLP S +LD++G LA
Sbjct: 185 IPSALCGLTGFKPTARRVSMQGVLPLSANLDSIGPLA 221
>gi|33592922|ref|NP_880566.1| amidase [Bordetella pertussis Tohama I]
gi|384204220|ref|YP_005589959.1| amidase [Bordetella pertussis CS]
gi|408415768|ref|YP_006626475.1| amidase [Bordetella pertussis 18323]
gi|33572570|emb|CAE42157.1| putative amidase [Bordetella pertussis Tohama I]
gi|332382334|gb|AEE67181.1| amidase [Bordetella pertussis CS]
gi|401777938|emb|CCJ63296.1| putative amidase [Bordetella pertussis 18323]
Length = 449
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/154 (48%), Positives = 97/154 (62%), Gaps = 3/154 (1%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R + GL +IKD+FDV G T GS ++ A R AVVV L GA +G+T +
Sbjct: 66 RSAIDGLPISIKDLFDVAGETTMAGSVA-RQGEPAAVRDAVVVRRLRAAGAVIVGRTNMT 124
Query: 130 EFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
EFA+ G N HYGTP NP + IPGGSSSG+AV+V + A+G+DT G VR+PA
Sbjct: 125 EFAYSGLGLNPHYGTPRNPWDRATGRIPGGSSSGAAVSVTDGMASGAIGSDTGGSVRIPA 184
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLA 221
+ CG+ G++PS VSM GVLP S +LD++G LA
Sbjct: 185 ALCGLAGFKPSAQRVSMQGVLPLSANLDSIGPLA 218
>gi|33597574|ref|NP_885217.1| amidase [Bordetella parapertussis 12822]
gi|33574002|emb|CAE38322.1| putative amidase [Bordetella parapertussis]
Length = 449
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/154 (48%), Positives = 97/154 (62%), Gaps = 3/154 (1%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R + GL +IKD+FDV G T GS ++ A R AVVV L GA +G+T +
Sbjct: 66 RSAIDGLPISIKDLFDVAGETTMAGSVA-RQGEPAAVRDAVVVRRLRAAGAVIVGRTNMT 124
Query: 130 EFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
EFA+ G N HYGTP NP + IPGGSSSG+AV+V + A+G+DT G VR+PA
Sbjct: 125 EFAYSGLGLNPHYGTPRNPWDRATGRIPGGSSSGAAVSVTDGMASGAIGSDTGGSVRIPA 184
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLA 221
+ CG+ G++PS VSM GVLP S +LD++G LA
Sbjct: 185 ALCGLAGFKPSAQRVSMQGVLPLSANLDSIGPLA 218
>gi|307730115|ref|YP_003907339.1| amidase [Burkholderia sp. CCGE1003]
gi|307584650|gb|ADN58048.1| Amidase [Burkholderia sp. CCGE1003]
Length = 451
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 123/386 (31%), Positives = 178/386 (46%), Gaps = 45/386 (11%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAGL ++KD+FD+KG VT GS + A R A V L + GA +G+T + EFA
Sbjct: 68 LAGLPVSVKDLFDIKGQVTTAGSRVLRD-AAPAARDAAAVARLREAGAVFVGRTNMSEFA 126
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
F G N HYGTP+NP + GGSSSG+AV+VA V ALGTDT G VR+PA+FCG+
Sbjct: 127 FSGLGLNPHYGTPLNPAHAGRLAGGSSSGAAVSVALGHVVAALGTDTGGSVRIPAAFCGL 186
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQL---NAVEPRRARRL- 248
G++P+ V + G +P S S D+VG +AR+ + V+ A P RL
Sbjct: 187 AGFKPTARRVPLDGAVPLSASFDSVGPIARSVDCCALLDSVISGQALDTAPRPLAGLRLG 246
Query: 249 ----IFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQ 304
ADD+ + + I ++ +A S+ + PE V +
Sbjct: 247 VTSDYVADDLDETVSTAFNRAIGMLRRAGASVERFVFPELYEVAGH-------------- 292
Query: 305 STSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAIN-TTQDN 363
P G ++A + + + + E + PR V +R+ + D
Sbjct: 293 --HPLAGITAVQAWA--------WHRRHVARE-ADAYDPR----VLKRLRAGEGRSAADY 337
Query: 364 IKILYKVRNEMRAALQRLLKDDKILVIPTVS-DPPLKLNTKKTYSAEFHDRTLVL---SS 419
I +L MR A RL + D L +PTV+ PP T A F VL S
Sbjct: 338 IDLLAARERFMRDARTRLARFDAWL-MPTVAVVPPAIAQTGSDDDAFFATNATVLRNPSV 396
Query: 420 IGSMSGCCQVAIPIGKYNEHPISISF 445
+ M GC + +P + E P+ +S
Sbjct: 397 VNFMDGCA-LTLPCHREGELPVGLSI 421
>gi|395500572|ref|ZP_10432151.1| hypothetical protein PPAM2_30997 [Pseudomonas sp. PAMC 25886]
Length = 447
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 109/186 (58%), Gaps = 8/186 (4%)
Query: 69 ARQPLA---GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGK 125
A QPL+ G+ A KD+FDV G +T G+ +RD A A V LL + G +GK
Sbjct: 57 AGQPLSVFDGVPLAWKDLFDVAGSITTAGAAH-RRDAPAALLDAPSVGLLCRAGMVSVGK 115
Query: 126 TVLDEFAFGITGENKHYGTPVNP---QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGC 182
T L E A+ G N H+GTP NP P IPGGSSSGSAVAVAA +V A+GTDT G
Sbjct: 116 TNLSELAYSGLGLNPHFGTPHNPSGIDQP-RIPGGSSSGSAVAVAADIVPIAMGTDTAGS 174
Query: 183 VRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
+R+PA+ G++GYR S S GV P + +LD++G L R+ + +L + +P
Sbjct: 175 IRIPAALNGVVGYRSSCRRYSRDGVFPLAHTLDSLGPLTRSVRDALAIDDLLNGRDQRQP 234
Query: 243 RRARRL 248
R+AR L
Sbjct: 235 RQARSL 240
>gi|359796667|ref|ZP_09299262.1| amidase [Achromobacter arsenitoxydans SY8]
gi|359365414|gb|EHK67116.1| amidase [Achromobacter arsenitoxydans SY8]
Length = 449
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 179/408 (43%), Gaps = 41/408 (10%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R + GL +IKD+FD++G T GS + A+ A VV L+ GA IG+T +
Sbjct: 66 RSAVEGLPISIKDLFDIEGETTMAGSVA-REGEPVADENAEVVQRLIAAGAVIIGRTNMT 124
Query: 130 EFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
EFA+ G N HYGTP+NP + IPGGSSSG+AV+VA + +G+DT G VR+PA
Sbjct: 125 EFAYSGLGINPHYGTPLNPYDRATGRIPGGSSSGAAVSVADGMAVAGIGSDTGGSVRIPA 184
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPR---- 243
+ CG+ G++PS VSM GVLP S +LD++G +A + + +L P+
Sbjct: 185 ALCGLTGFKPSAWRVSMKGVLPLSANLDSIGPIAASVRCCAELDAILSGDGGPVPQPLPV 244
Query: 244 RARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIAS-NVPSLKGLR 302
R RL +P + + K + + G + +P
Sbjct: 245 RGLRL----------AIPTKLALDAMDKHVSDTFAAAVQRLQDAGALVDRIEIPEF---- 290
Query: 303 AQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQD 362
A L A++S E + + + A R V R++ + T
Sbjct: 291 ----------AELAAINS-KGGFTAAEAWAWHRDLIARAGKRYDPRVVSRIMRGQDMTAA 339
Query: 363 NIKILYKVRNEMRAALQRLLKDDKILVIPTVSD-PPLKLNTKKTYSAEFHDRTLVLSS-- 419
+ L R AA+ + L++PT P + + + A + L+L +
Sbjct: 340 DYLDLLDAREAWVAAVDHRIAGYDALIMPTTPIVAPAVADLQASDDAYYAANGLILRNPT 399
Query: 420 -IGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD---TVLDLY 463
I + GC +++P P+ + +G D+ +L V DLY
Sbjct: 400 LINFLDGCA-LSLPCHAPGSAPVGLMIAGSNGADRRILGIGLAVEDLY 446
>gi|381150586|ref|ZP_09862455.1| allophanate hydrolase [Methylomicrobium album BG8]
gi|380882558|gb|EIC28435.1| allophanate hydrolase [Methylomicrobium album BG8]
Length = 602
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/162 (48%), Positives = 96/162 (59%), Gaps = 3/162 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ FAIKD D+ G T P + + E++A VV L+ GA IGKT LD+F
Sbjct: 72 PLYGIPFAIKDNIDLAGLETTAACPSFA---YRPEKSAFVVQRLIAAGAIPIGKTNLDQF 128
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G+ G YG N +I GGSSSGSAVAVA LV FALGTDT G RVPA+F
Sbjct: 129 ATGLVGTRSPYGICRNAFDADYIAGGSSSGSAVAVAKGLVSFALGTDTAGSGRVPAAFNN 188
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHV 233
++G +PS G +S GV+P QSLD V + A +A RV V
Sbjct: 189 LVGVKPSRGLLSASGVVPACQSLDCVSIFALSAQDAERVLQV 230
>gi|299533924|ref|ZP_07047287.1| amidase [Comamonas testosteroni S44]
gi|298718094|gb|EFI59088.1| amidase [Comamonas testosteroni S44]
Length = 225
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 97/157 (61%), Gaps = 5/157 (3%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
AR PL GL ++KD+FD+ G+ T G D A +TA VV L + GA +G T +
Sbjct: 66 ARSPLEGLPISVKDLFDIAGHPT-LGGSRLLADAAPATQTAEVVQRLRRAGAVIVGTTNM 124
Query: 129 DEFAFGITGENKHYGTPVNPQM----PSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVR 184
EFA+ G N HYGTP NP IPGGSSSG+A++V + A+G+DT G VR
Sbjct: 125 TEFAYSGLGLNPHYGTPRNPWQRDIDGGRIPGGSSSGAAISVTDGMALAAIGSDTGGSVR 184
Query: 185 VPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLA 221
+P++ CG+ G++P+ VSM GVLP S +LD++G LA
Sbjct: 185 IPSALCGLTGFKPTARRVSMQGVLPLSANLDSIGPLA 221
>gi|418532785|ref|ZP_13098682.1| amidase [Comamonas testosteroni ATCC 11996]
gi|371450111|gb|EHN63166.1| amidase [Comamonas testosteroni ATCC 11996]
Length = 454
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 97/157 (61%), Gaps = 5/157 (3%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
AR PL GL ++KD+FD+ G+ T G D A +TA VV L + GA +G T +
Sbjct: 66 ARSPLEGLPISVKDLFDIAGHPT-LGGSRLLADAAPATQTAEVVQRLRRAGAVIVGTTNM 124
Query: 129 DEFAFGITGENKHYGTPVNPQM----PSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVR 184
EFA+ G N HYGTP NP IPGGSSSG+A++V + A+G+DT G VR
Sbjct: 125 TEFAYSGLGLNPHYGTPRNPWQRDIDGGRIPGGSSSGAAISVTDGMALAAIGSDTGGSVR 184
Query: 185 VPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLA 221
+P++ CG+ G++P+ VSM GVLP S +LD++G LA
Sbjct: 185 IPSALCGLTGFKPTARRVSMQGVLPLSANLDSIGPLA 221
>gi|424744663|ref|ZP_18172952.1| amidase [Acinetobacter baumannii WC-141]
gi|422942707|gb|EKU37744.1| amidase [Acinetobacter baumannii WC-141]
Length = 369
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 120/395 (30%), Positives = 188/395 (47%), Gaps = 43/395 (10%)
Query: 76 LKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGI 135
LK +KD D++G T GS + A+ A VV +LK I KT L E AFGI
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRAL-LNVEPAQNDAEVVKNILKADCEIIAKTNLHELAFGI 73
Query: 136 TGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGY 195
TG N +GTP+NP+ P IPGGSSSGSA AVAA+ DF LGTDT G +R+PA+ CG+ G
Sbjct: 74 TGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVFGL 133
Query: 196 RPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIF 255
+P+ G VS GV P S SLD VG A + ++ + ++ D F
Sbjct: 134 KPTFGRVSRKGVYPPSSSLDCVGPFANSVEMIEKAMQII-----------------DPTF 176
Query: 256 ---QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGT 312
+ + PKL + V ++ + +Q + N+ Q+TS +
Sbjct: 177 KPTEFTSAPKLAVLDVKAEDVIWNCIHQVLQKANL----------------QTTSEK--V 218
Query: 313 ATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRN 372
+A + + YE + E ++ +G +V R+L+A TT + +K V+
Sbjct: 219 EHFEAAYDAGMQIINYENWQAFGELTQTG--LIGSDVNGRLLKAAETTLEQVKQAEVVKA 276
Query: 373 EMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIP 432
++ L LL+ LV+PT+ P K++ + A + LV ++SG +++P
Sbjct: 277 QLTQELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPF--NLSGHPVISVP 334
Query: 433 IGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
+ P+ + ++ H D+ L D++Q
Sbjct: 335 LETSEGLPVGLQIVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|365855896|ref|ZP_09395928.1| Amidase [Acetobacteraceae bacterium AT-5844]
gi|363718689|gb|EHM02021.1| Amidase [Acetobacteraceae bacterium AT-5844]
Length = 453
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 176/392 (44%), Gaps = 31/392 (7%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
A P AG+ +IKD+FD +G T GS K D A TA VV L + G +G+T +
Sbjct: 68 APSPWAGIPISIKDLFDQEGVRTRAGSVALK-DAPVATATAPVVARLQRAGFVVLGRTNM 126
Query: 129 DEFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
EFAF G N HYGTP +P + +PGGSSSG+AVAVA + ALG+DT G R P
Sbjct: 127 VEFAFSGLGVNPHYGTPRSPYDRATGRLPGGSSSGAAVAVADGMGLGALGSDTGGSCRAP 186
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN---ASILHRVGHVLLQLNAVEPR 243
A+ CGI+GY+P+ V + GVLP S SLD++G LA +ILH + ++ PR
Sbjct: 187 AALCGIVGYKPTAKRVPLEGVLPLSFSLDSIGPLANTVGCCAILHGLMAGEEEVAPPAPR 246
Query: 244 RARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRA 303
L F VP+ S E L P + Q + + +
Sbjct: 247 SVAGLRFG--------VPE------DSYLFEGL----EPAVVTAFQSALARLEAAGARIE 288
Query: 304 QSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDN 363
+ PE L + ++++ Y + + + ++ A P + R++ +
Sbjct: 289 RFAIPELADIPLANATGGFVAMESYAW---HRKLIEKAGPEYDQRILARIMRGATVGAAD 345
Query: 364 IKILYKVRNEMRAALQ-RLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGS 422
L K R + AA+ R D IL PT + P ++ L+L + +
Sbjct: 346 YIELMKERERIIAAVAPRTAPYDAILC-PTCAVTPPAISAVDEVDEYNRINLLILRNTAA 404
Query: 423 MS--GCCQVAIPIGKYNEHPISISFITYHGGD 452
+ C +++P E P+ + H GD
Sbjct: 405 FNFLDRCSISVPCHAPGEAPVGLMLTGAHDGD 436
>gi|404215136|ref|YP_006669331.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase
[Gordonia sp. KTR9]
gi|403645935|gb|AFR49175.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase
[Gordonia sp. KTR9]
Length = 404
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 119/390 (30%), Positives = 179/390 (45%), Gaps = 41/390 (10%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G A+KD++ +KG+ G G+ W R+ + TA V LL GA+ G + DEFA
Sbjct: 43 LQGKSVAVKDLYTIKGHRVGAGNEQWLRESQPSRTTARSVAALLAAGASVAGISRTDEFA 102
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+ + G N HYGTP NP+ + IPGGSSSGSA AVA LGTDT G +R+P+S+ G+
Sbjct: 103 YSLAGTNGHYGTPPNPKASNRIPGGSSSGSASAVALGQATIGLGTDTGGSIRIPSSYQGL 162
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G R +HG VS G+LP + S DTVG + R+ + L VL+ + R + ++D
Sbjct: 163 YGIRTTHGAVSRDGLLPLAPSFDTVGWMTRSRADLVATTSVLMP--GLPSRVDFPITYSD 220
Query: 253 DIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGT 312
DI L+ P + + I+ L G Q P L+ +R T
Sbjct: 221 DIIDLAS-PDVAA--AVRAGIKRL-GSQMP---------------LRAIRFD-------T 254
Query: 313 ATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNI----KILY 368
A L + Q +E + EWV L +V R A T ++ + L
Sbjct: 255 AVLPLWVKAFQTRQGWEAWRAHGEWVSRHWDSLNPDVRSRFETASKVTASDLAAADRTLA 314
Query: 369 KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHD---RTLVLSSIGSMSG 425
RN + +AL + IL++P+ S + + D RT L+ + ++G
Sbjct: 315 TARNRINSAL-----GETILLLPSASSTAPTRASAALGGSVIEDTRARTFQLTCLAGITG 369
Query: 426 CCQVAIPIGKYNEHPISISFITYHGGDKFL 455
V+ P+ P+ + + G D L
Sbjct: 370 RPAVSNPL-PVGGPPVGLCAVGPRGSDLAL 398
>gi|192289986|ref|YP_001990591.1| allophanate hydrolase [Rhodopseudomonas palustris TIE-1]
gi|192283735|gb|ACF00116.1| allophanate hydrolase [Rhodopseudomonas palustris TIE-1]
Length = 607
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 99/172 (57%), Gaps = 3/172 (1%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
+PL G+ FA+KD DV T P + E TA V LL GA IGKT LD+
Sbjct: 69 KPLWGIPFAVKDNIDVACLPTTAACPGFASTPSE---TAFAVQRLLDAGAVLIGKTNLDQ 125
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FA G+ G Y P N P ++PGGSSSGSAVAVA LV FALGTDT G RVPA+
Sbjct: 126 FATGLVGVRTPYPVPRNAIDPRYVPGGSSSGSAVAVAHGLVTFALGTDTAGSGRVPAALN 185
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
I+G +PS G+VS G++P ++LDT+ + A H + ++ + V+P
Sbjct: 186 NIVGLKPSLGSVSSRGMVPACRTLDTISVFAGTVDDAHAIYRIMATFDGVDP 237
>gi|332529378|ref|ZP_08405339.1| amidase [Hylemonella gracilis ATCC 19624]
gi|332041176|gb|EGI77541.1| amidase [Hylemonella gracilis ATCC 19624]
Length = 452
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 98/155 (63%), Gaps = 3/155 (1%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
AR PL GL +IKD+FDV G T GS RD A+ A+VV L+ GA +G+T +
Sbjct: 66 ARSPLEGLPVSIKDLFDVAGETTLAGS-VVLRDAPPAQAHALVVQRLIAAGAVIMGRTNM 124
Query: 129 DEFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
EFA+ G N HYGTP NP + IPGGS+SG AV+V+ + A+G+DT G VR+P
Sbjct: 125 TEFAYSGLGLNPHYGTPRNPWDRATGRIPGGSTSGGAVSVSDGMALAAIGSDTGGSVRIP 184
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLA 221
++ CG+ G++PS V M GVLP S LD++G LA
Sbjct: 185 SALCGLTGFKPSARRVPMDGVLPLSIQLDSIGPLA 219
>gi|73541082|ref|YP_295602.1| amidase [Ralstonia eutropha JMP134]
gi|72118495|gb|AAZ60758.1| Amidase [Ralstonia eutropha JMP134]
Length = 451
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 94/156 (60%), Gaps = 4/156 (2%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
PLAGL ++KD+FDV G VT S + D A A VV L GA +G+T + E
Sbjct: 65 HPLAGLPVSVKDLFDVAGEVTRAASA-VRHDAPPATADATVVARLRHAGAALVGRTNMTE 123
Query: 131 FAFGITGENKHYGTPVNPQMP---SHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
FAF G N H+GTPVNP + IPGGSSSG+AV+VA L ALG+DT G +R+PA
Sbjct: 124 FAFSGVGINPHFGTPVNPASADGIARIPGGSSSGAAVSVALGLAVAALGSDTGGSIRIPA 183
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
+ CG+ G++P+ V + G P S +LDT +AR
Sbjct: 184 ALCGLTGFKPTTRRVPLTGAFPLSYTLDTACAMART 219
>gi|381203203|ref|ZP_09910311.1| amidase [Sphingobium yanoikuyae XLDN2-5]
Length = 459
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 176/391 (45%), Gaps = 31/391 (7%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
P+ G +IKD+FDV G T GS D A A VV L + GA +GKT + EF
Sbjct: 82 PIDGAIVSIKDLFDVAGEPTRAGSLILA-DAPPATVDAPVVARLKQAGAVIVGKTNMVEF 140
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
AF G N HYGTP NP + +PGGS+SG VAVA + + A+GTDT G R+PA+ CG
Sbjct: 141 AFSGVGVNPHYGTPGNPADRARVPGGSTSGGGVAVADAMCEIAIGTDTGGSCRIPAALCG 200
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
++GY+P+ V G P S +LD++G +A + R +L RRL A
Sbjct: 201 VVGYKPTKARVQTDGAFPLSPTLDSIGPIATSVDACFRTDAILAG------EAPRRLELA 254
Query: 252 DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNV-PSLKGLRA-QSTSPE 309
+ +P+ + + + + + G ++ V P ++A QS P
Sbjct: 255 PLKGLRAGIPQGLPLADLDATVAACFADALAQLGKAGMTLSDEVFPQFDAMQALQSPVP- 313
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
++SV E I+ + + + V R+ + T + + +
Sbjct: 314 --------IASV-------EAYAIHRDRIATRAQDFDPIVLARMQAGRDVTPERHRQMLV 358
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAE-FHDRTLVL---SSIGSMSG 425
R + ++ L D IL +PT P + + +A+ F R +L + +G+
Sbjct: 359 ERAALVRSMDARLADLDILALPTT--PIVAPTQAEVANADAFVARNRLLLRNTGLGNSFD 416
Query: 426 CCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
C +++P+ + P+ + + G D+ L
Sbjct: 417 LCAISLPLPREGGLPVGLMLMARAGQDRRLF 447
>gi|384220476|ref|YP_005611642.1| glutamyl-tRNA(Gln) amidotransferase subunit [Bradyrhizobium
japonicum USDA 6]
gi|354959375|dbj|BAL12054.1| glutamyl-tRNA(Gln) amidotransferase subunit [Bradyrhizobium
japonicum USDA 6]
Length = 449
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 185/407 (45%), Gaps = 51/407 (12%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA AG+ +IKD+FD+KG VT GS D A++ A V L K G IG+T
Sbjct: 66 AAPSRYAGIPVSIKDLFDIKGQVTRAGSRALD-DSAPADQDAATVARLRKAGFVVIGRTN 124
Query: 128 LDEFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
+ EFA+ G N HYGTP + H+PGGSSSG+AV+V + ALGTDT G R+
Sbjct: 125 MTEFAYSGIGINPHYGTPKGAWNRAEGHVPGGSSSGAAVSVLDGMAHGALGTDTGGSCRI 184
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPR-- 243
PA+F GI+GY+P+ V + G +P S SLD++G LAR+ S + VL V P+
Sbjct: 185 PAAFNGIVGYKPTQRRVPLDGSVPLSFSLDSIGPLARSVSCCAILDAVLANEPIVPPKPR 244
Query: 244 --RARRL-----IFADDIFQLSKVPKLKTIHVISKAIESLSGYQNP-EHMNVGQYIASNV 295
+ RL I DD+ +A++SL+ + E + + ++
Sbjct: 245 PVKGMRLAVPTTIALDDL-------DADVASTFERALKSLADHGAVIERIEMAEF----- 292
Query: 296 PSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKT---IYEEWVKSAKPRLGYNVFER 352
P N A S + RY IY+ PR+ +
Sbjct: 293 --------HDIGPMNAKGGFAASES--YAWHRYLIAAKGDIYD-------PRVSVRIMRG 335
Query: 353 VLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPP--LKLNTKKTYSAEF 410
+ + D I +L + R+ + R+ D +++ T + PP L K ++ E
Sbjct: 336 EAQ---SAADYIDLLNERRSLIARVNARVAPYDALMLPTTANTPPKISDLADDKAFTRE- 391
Query: 411 HDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
+ R L ++ +M C +++P + + P+ + G D+ + +
Sbjct: 392 NLRALRNCTLINMIDGCAISLPAHREGDVPVGLMLAGAGGSDRRIFE 438
>gi|218768373|ref|YP_002342885.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Neisseria
meningitidis Z2491]
gi|385338205|ref|YP_005892078.1| aspartyl-tRNA(Asn) amidotransferase subunit A (Asp-ADT subunit A)
[Neisseria meningitidis WUE 2594]
gi|433475114|ref|ZP_20432455.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 88050]
gi|433479754|ref|ZP_20437044.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 63041]
gi|433513674|ref|ZP_20470464.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 63049]
gi|433515883|ref|ZP_20472651.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 2004090]
gi|433517747|ref|ZP_20474493.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 96023]
gi|433520129|ref|ZP_20476849.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 65014]
gi|433524114|ref|ZP_20480775.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 97020]
gi|433528423|ref|ZP_20485032.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM3652]
gi|433530624|ref|ZP_20487213.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM3642]
gi|433532893|ref|ZP_20489456.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 2007056]
gi|433534607|ref|ZP_20491147.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 2001212]
gi|433541207|ref|ZP_20497659.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 63006]
gi|24211723|sp|Q9JTZ5.1|GATA_NEIMA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|121052381|emb|CAM08713.1| Glu-tRNA(Gln) amidotransferase subunit A [Neisseria meningitidis
Z2491]
gi|319410619|emb|CBY90988.1| aspartyl-tRNA(Asn) amidotransferase subunit A (Asp-ADT subunit A)
[Neisseria meningitidis WUE 2594]
gi|432210932|gb|ELK66887.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 88050]
gi|432216093|gb|ELK71975.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 63041]
gi|432247206|gb|ELL02645.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 63049]
gi|432252809|gb|ELL08159.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 2004090]
gi|432253483|gb|ELL08827.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 96023]
gi|432254851|gb|ELL10185.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 65014]
gi|432259358|gb|ELL14629.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 97020]
gi|432265224|gb|ELL20420.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM3652]
gi|432266716|gb|ELL21898.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 2007056]
gi|432267131|gb|ELL22312.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM3642]
gi|432271349|gb|ELL26474.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 2001212]
gi|432277220|gb|ELL32269.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 63006]
Length = 481
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 99/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGIPVAYKDIFCQTGWRSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL G +G+T +DEFA G T EN YG NP P H+PGG
Sbjct: 92 -MLDNFISPYTATVVQKLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNPEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQA 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>gi|86750696|ref|YP_487192.1| amidase [Rhodopseudomonas palustris HaA2]
gi|86573724|gb|ABD08281.1| Amidase [Rhodopseudomonas palustris HaA2]
Length = 449
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 119/405 (29%), Positives = 189/405 (46%), Gaps = 47/405 (11%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA P AG+ +IKD+FD++G VT GS D+ AE A V L + G IG+T
Sbjct: 66 AAPSPYAGIPVSIKDLFDIRGQVTRAGSRALD-DNPPAEDDAPAVARLRRAGFVVIGRTN 124
Query: 128 LDEFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
+ EFA+ G N HYGTP + + ++PGGSSSG+AV+VA + LGTDT G R+
Sbjct: 125 MTEFAYSGIGINPHYGTPKSAYGRDVGYVPGGSSSGAAVSVADGMAHAGLGTDTGGSCRI 184
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAV----E 241
PA+F GI+GY+PS V G +P S SLD++G LAR+ + + VL V
Sbjct: 185 PAAFNGIVGYKPSQQRVPRDGAVPLSFSLDSIGPLARSVACCAVLDAVLADEEIVPLAPR 244
Query: 242 PRRARRLIFADDIF--QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLK 299
P + RL + +L + +L +A+++L+G H + + I VP
Sbjct: 245 PLKGLRLAVPTTVALDELDEAVRL----AFERALKALAG-----HGAIIEKI--EVPEF- 292
Query: 300 GLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEA-IN 358
+P + L A S + RY + + PR V ER+L
Sbjct: 293 ----NDVAPLSAKGGLTAAES--YAWHRYLIVAQGDVY----DPR----VRERILRGESQ 338
Query: 359 TTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPP--LKLNTKKTYSA----EFHD 412
+ D + + ++ + A RL D +++ T + PP L K ++ +
Sbjct: 339 SAADYVDTITARKSLIARATTRLAPYDAVVMPTTANTPPAIADLADDKAFTKANLLALRN 398
Query: 413 RTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
TL+ +M C +++P + E P+ + +G D+ + +
Sbjct: 399 CTLI-----NMIDGCAISLPCHQDGEAPVGLMVAGVNGADRDVFE 438
>gi|161870226|ref|YP_001599396.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Neisseria
meningitidis 053442]
gi|189045255|sp|A9M003.1|GATA_NEIM0 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|161595779|gb|ABX73439.1| Glu-tRNA(Gln) amidotransferase subunit A [Neisseria meningitidis
053442]
Length = 481
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 99/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGIPVAYKDIFCQTGWRSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL G +G+T +DEFA G T EN YG NP P H+PGG
Sbjct: 92 -MLDNFISSYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGATKNPWNPEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQA 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>gi|440224646|ref|YP_007338042.1| allophanate hydrolase [Rhizobium tropici CIAT 899]
gi|440043518|gb|AGB75496.1| allophanate hydrolase [Rhizobium tropici CIAT 899]
Length = 600
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 126/469 (26%), Positives = 198/469 (42%), Gaps = 64/469 (13%)
Query: 47 VDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAE 106
VD G L E + P A +PL G+ FA+KD DV G T PD+ + +
Sbjct: 46 VDIGDLLVEAEALGAFDP----ATKPLWGIPFAVKDNIDVAGMPTTAACPDYA---YMPD 98
Query: 107 RTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAV 166
A VV LL + GA IGKT LD+FA G+ G Y P N +PGGSSSGSAVA
Sbjct: 99 TDATVVRLLKEAGALVIGKTNLDQFATGLVGVRTPYPVPRNAMDADLVPGGSSSGSAVAT 158
Query: 167 AAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASI 226
A +V FALGTDT G R+PA I+G +PS G +S GV+P ++LD V + A
Sbjct: 159 AQGIVSFALGTDTAGSGRIPAGLNNIVGMKPSLGALSTSGVIPACRTLDCVSIFALTVDD 218
Query: 227 LHRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMN 286
RV F+++ P K + SK I + Q P +
Sbjct: 219 AWRV------------------------FEVAGCPDAKDAY--SKTIPANGFRQAPPVLT 252
Query: 287 VGQYIASNVPS-----LKGLRAQSTSPENGTATLKALSSVMLSLQRYEF----KTIYE-E 336
+G VP+ G + ++ L L ++ + +F +YE
Sbjct: 253 IG------VPAKADRLFFGDAVMEAAYDDALRMLTKLGHRLVEVPFGDFYKVANLLYEGA 306
Query: 337 WV--KSAKPRLGYNVFERVLEAIN----------TTQDNIKILYKVRNEMRAALQRLLKD 384
WV + A + ++ E + + D K LY ++ ++ + +L+
Sbjct: 307 WVAERYAAVKDFFDATEASFHPVTRGIYGGARQLSAADAFKGLYALQ-ALKQKVAQLIAS 365
Query: 385 DKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIG-KYNEHPISI 443
+ +PT + + + E + R ++ ++ C +A+P G + + P S+
Sbjct: 366 VDLFCVPTAPTHYTRADLEAEPIRE-NSRLGTYTNFVNLLDMCGIAVPTGTRSDGRPASV 424
Query: 444 SFITYHGGDKFLLDTVLDLYDSLQEQVNIASNLVPLPDTNGSIDASELL 492
+ +T G D D++ S + L P P S+D + L+
Sbjct: 425 TLLTSSGRDGLAASLARDIHASSSLTLGATGWLQPKPKDAISVDEAGLI 473
>gi|116696062|ref|YP_841638.1| amidase [Ralstonia eutropha H16]
gi|113530561|emb|CAJ96908.1| Amidase [Ralstonia eutropha H16]
Length = 451
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/168 (44%), Positives = 101/168 (60%), Gaps = 1/168 (0%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ F +K + DV+G+ T G+ + A R A V L+ GA + +DE+
Sbjct: 69 PLAGVPFVVKSLLDVRGHATLAGAAP-RAQEPPALRHADTVEALVAAGAVPVALAAMDEY 127
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G TGEN G NP PS I GGSS+G+A VAA +V F LG+DT G +R PA+FCG
Sbjct: 128 ACGATGENVIGGPVRNPLDPSRITGGSSAGTAALVAAGVVPFGLGSDTNGSIRAPAAFCG 187
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNA 239
I G RP+ G +S+ G +P +QSLDTVG +A +A L +L ++A
Sbjct: 188 IWGLRPTTGRLSLAGCVPYAQSLDTVGPMAGSACDLALAYAAMLGVDA 235
>gi|377820829|ref|YP_004977200.1| amidase [Burkholderia sp. YI23]
gi|357935664|gb|AET89223.1| amidase [Burkholderia sp. YI23]
Length = 380
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 120/355 (33%), Positives = 169/355 (47%), Gaps = 43/355 (12%)
Query: 51 AFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAV 110
AFL+ F+L P AIKD D+ GY T S + D A R A
Sbjct: 3 AFLQEFDLASHATDDAP---------TIAIKDSIDIAGYPTTAAS-EALADSAPALRHAP 52
Query: 111 VVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQL 170
VV LL G GK + E AFG+TG N+ GTPVNPQ P+ IPGGSSSGSA AV L
Sbjct: 53 VVQRLLDAGWRISGKANMHELAFGMTGINEFSGTPVNPQDPARIPGGSSSGSASAVGLGL 112
Query: 171 VDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRV 230
VD ALGTDT G VR PA+ CG++G +P+ G VS GV P SLD VG AR+ ++ +
Sbjct: 113 VDAALGTDTGGSVRCPAACCGVIGLKPTFGRVSREGVAPRQTSLDCVGPFARD---MNTI 169
Query: 231 GHVLLQLN-AVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQ 289
V+L ++ + + RARR D +P+++ I A+ +
Sbjct: 170 IDVMLAIDPSFQGGRARR----DATGLRVALPEVEAAGEIRHAVAAAVARSR-------- 217
Query: 290 YIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNV 349
AS L+ +R T+ G A + A E + V S K LG ++
Sbjct: 218 -FASRGVQLEFMRDAFTA---GLAIINA-----------ETWRAFGHLVDSGK--LGADI 260
Query: 350 FERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKK 404
R+ A NT + ++R + + +L+D +LV+PT+ P+ + +
Sbjct: 261 LARLRTAANTQVSELDAAERIRRDFTNEVDHVLEDADVLVLPTMPSLPITIEAAR 315
>gi|284045816|ref|YP_003396156.1| amidase [Conexibacter woesei DSM 14684]
gi|283950037|gb|ADB52781.1| Amidase [Conexibacter woesei DSM 14684]
Length = 416
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/179 (46%), Positives = 101/179 (56%), Gaps = 2/179 (1%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
A +PLAG+ A+KD+ V G G GS + D A +V L GAT +G L
Sbjct: 49 ATRPLAGITVAVKDLVAVAGQPLGAGSA-VRADAAPEPADAPIVARLRACGATIVGLVTL 107
Query: 129 DEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPAS 188
EFAFG+TG N GTP NP+ IPGGSSSGSAVAVA A+GTDT G VR+PA+
Sbjct: 108 HEFAFGVTGLNAWAGTPENPRAAGCIPGGSSSGSAVAVADGSARVAIGTDTGGSVRIPAA 167
Query: 189 FCGILGYRPSHGTV-SMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRAR 246
CG+ G++PS T GV P + SLDTVG LA + L V L +L R AR
Sbjct: 168 LCGVAGFKPSGSTTYPTTGVFPLAPSLDTVGTLASTVADLAAVHAALGELPGPPVRPAR 226
>gi|398835571|ref|ZP_10592932.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. YR522]
gi|398216147|gb|EJN02703.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. YR522]
Length = 459
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 121/393 (30%), Positives = 184/393 (46%), Gaps = 20/393 (5%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R PL G+ A KD+FD +G T GS W R+ A A +V + G CIGKT L
Sbjct: 68 RGPLDGVPIAWKDLFDAQGTPTTAGSALW-RNAPPAFADAQLVARAARAGLVCIGKTNLS 126
Query: 130 EFAFGITGENKHYGTPVNPQMP--SHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
EFAF G N HYGTPVN P + +PGGSSSGSA+AVA +V A+GTDT G +RVPA
Sbjct: 127 EFAFSGLGINAHYGTPVNTLHPGAARVPGGSSSGSALAVALGIVPLAMGTDTAGSIRVPA 186
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
+ G++G++ S + GV S++LD +G +AR+ + + VL ++ V+
Sbjct: 187 ALNGVVGFKSSSARYAFGGVTGLSETLDCLGPIARDVADCLALDPVLRGMSPVD-----V 241
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
L A L + V+ A + +N E A + + L+A S++
Sbjct: 242 LAVAPGDGALEGIRIRAPRDVLDDARVTPGVRRNTERALDALQRAGAIVDARPLQAVSST 301
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
E + + +L+RY + + + S R+ V R+ A + L
Sbjct: 302 FE--LIATRGWLGALEALERY--RNLLQ---TSDAARIDARVRTRLQAANGFPPERHAEL 354
Query: 368 YKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDR---TLVLSSIGSMS 424
R ++ AAL+ L LV+P+V+ L ++ F D TL L+ +GS
Sbjct: 355 MAQRWQLMAALKDELA-GAALVMPSVAHEAPLLAQVESSPEAFADTNLATLRLTMLGSFL 413
Query: 425 GCCQVAIPIGKYNEH-PISISFITYHGGDKFLL 456
+++PI + P + G D+ LL
Sbjct: 414 DLTALSLPISSDGDTLPTGLQLALPCGQDQALL 446
>gi|220908629|ref|YP_002483940.1| allophanate hydrolase [Cyanothece sp. PCC 7425]
gi|219865240|gb|ACL45579.1| allophanate hydrolase [Cyanothece sp. PCC 7425]
Length = 607
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 95/150 (63%), Gaps = 3/150 (2%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ FAIKD D G T G P++ + +R+A VV L+ GA IGKT LD+F
Sbjct: 67 PLYGIPFAIKDNLDWAGTPTTAGCPEFA---YIPKRSAPVVEKLIAAGAIPIGKTNLDQF 123
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G+ G YG NP ++IPGGSS+GSAVAV+A LV F LGTDT G RVPA+F
Sbjct: 124 ATGLVGTRTPYGICRNPFHQNYIPGGSSAGSAVAVSAGLVSFGLGTDTAGSGRVPAAFTN 183
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLA 221
I+G +PS G +S G++P +SLD V + +
Sbjct: 184 IVGLKPSRGYLSTTGLVPAVRSLDCVSIFS 213
>gi|307725904|ref|YP_003909117.1| Amidase [Burkholderia sp. CCGE1003]
gi|307586429|gb|ADN59826.1| Amidase [Burkholderia sp. CCGE1003]
Length = 380
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 115/356 (32%), Positives = 161/356 (45%), Gaps = 41/356 (11%)
Query: 49 FGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERT 108
AFL+ F+L+ + P AIKD D+ GY T S D A R
Sbjct: 1 MSAFLQEFDLVAHARADAP---------TIAIKDSIDIAGYATTAASRALA-DAPPATRH 50
Query: 109 AVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAA 168
A VV LL G GKT + E AFG+TG N GTP NPQ + IPGGSSSGSA AV
Sbjct: 51 ADVVQRLLDAGWRITGKTNMHELAFGMTGINDFCGTPRNPQDAARIPGGSSSGSASAVGL 110
Query: 169 QLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILH 228
+LVD ALGTDT G VR PA+ CG++G +P+ G VS GV P +LD VG AR+ + +
Sbjct: 111 RLVDAALGTDTGGSVRGPAACCGVIGLKPTFGRVSREGVAPRITTLDCVGPFARDMNTIV 170
Query: 229 RVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVG 288
V + A++P D +P ++ I A+ + NV
Sbjct: 171 DV------MQAIDPSFQHNRARGDAANLRIAMPDVEADDAIRNAVAAAVVRSGLSSRNV- 223
Query: 289 QYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYN 348
L +R T+ G A + A E + V S K LG +
Sbjct: 224 --------RLAAMRDAFTA---GLAVINA-----------ETWRAFGHLVDSGK--LGAD 259
Query: 349 VFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKK 404
+ R+ A NTT ++ ++R + +L+ +LV+PT+ P+ + +
Sbjct: 260 IEARLRTAANTTASDLDSAERIRRAFTDEVDSVLQHADVLVLPTMPSVPITIEAAR 315
>gi|268682309|ref|ZP_06149171.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
gonorrhoeae PID332]
gi|268622593|gb|EEZ54993.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
gonorrhoeae PID332]
Length = 481
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 99/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWCSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL G +G+T +DEFA G T EN YG NP P H+PGG
Sbjct: 92 -MLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNPEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQA 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>gi|427410189|ref|ZP_18900391.1| hypothetical protein HMPREF9718_02865 [Sphingobium yanoikuyae ATCC
51230]
gi|425712322|gb|EKU75337.1| hypothetical protein HMPREF9718_02865 [Sphingobium yanoikuyae ATCC
51230]
Length = 454
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 95/163 (58%), Gaps = 1/163 (0%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
P+ G +IKD+FDV G T GS D A A VV L + GA +GKT + EF
Sbjct: 77 PIDGAIVSIKDLFDVAGEPTRAGSLILA-DAPPATVDAPVVARLKQAGAVIVGKTNMVEF 135
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
AF G N HYGTP NP + +PGGS+SG VAVA Q+ + A+GTDT G R+PA+ CG
Sbjct: 136 AFSGVGVNPHYGTPGNPADRARVPGGSTSGGGVAVADQMCEIAIGTDTGGSCRIPAALCG 195
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL 234
++GY+P+ V G P S +LD++G +A + R +L
Sbjct: 196 VVGYKPTKARVPTDGAFPLSPTLDSIGPIATSVDACFRTDAIL 238
>gi|75909879|ref|YP_324175.1| amidase [Anabaena variabilis ATCC 29413]
gi|75703604|gb|ABA23280.1| Amidase [Anabaena variabilis ATCC 29413]
Length = 464
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 97/162 (59%), Gaps = 1/162 (0%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAG+ FA+K++FD+ G T G+ ++ A R A V L + GA +G +DE+A
Sbjct: 67 LAGVPFAVKNLFDLVGLTTLAGA-KINAENPPASRDATAVAKLKQAGAVLVGALNMDEYA 125
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+G EN HYG NP + GGSS GSAVAVAA LV F LG+DT G +RVPA+ CG+
Sbjct: 126 YGFVTENSHYGVTRNPHDLQRVAGGSSGGSAVAVAAGLVPFTLGSDTNGSIRVPAALCGV 185
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL 234
G++P++G +S GV S S D +G AR+ + + +L
Sbjct: 186 FGFKPTYGRLSRGGVTLFSSSFDHIGPFARSVGDIATIFDIL 227
>gi|421557454|ref|ZP_16003359.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 80179]
gi|402335092|gb|EJU70367.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 80179]
Length = 481
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 99/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGIPVAYKDIFCQTGWRSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL G +G+T +DEFA G T EN YG NP P H+PGG
Sbjct: 92 -MLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNPEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQA 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>gi|410461848|ref|ZP_11315485.1| glutamyl-tRNA(gln) amidotransferase subunit a [Bacillus
azotoformans LMG 9581]
gi|409925106|gb|EKN62335.1| glutamyl-tRNA(gln) amidotransferase subunit a [Bacillus
azotoformans LMG 9581]
Length = 469
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 95/167 (56%), Gaps = 11/167 (6%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGS---PDWKRDHHEAERTAVVVTLLLKNGATCIGKT 126
R PL G+ A+KD+ G T GS W D AV V L + GA IGK
Sbjct: 69 RGPLHGIPIAVKDILQTAGVKTTGGSKIFEGWVPDED-----AVAVQKLREAGAIIIGKA 123
Query: 127 VLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
L EFA G T EN HYG+ NP IPGGSS GSAVA A + A+GTDT G +R+P
Sbjct: 124 NLHEFAMGATTENPHYGSTKNPWNEKRIPGGSSGGSAVATATGMAFGAVGTDTAGSIRLP 183
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLA---RNASILHRV 230
A+ CG +G++P++G VS G LP S SLD VG + R+A+I+ V
Sbjct: 184 AAMCGTVGFKPTYGVVSRRGCLPFSWSLDHVGPMTRTVRDAAIMLEV 230
>gi|222106661|ref|YP_002547452.1| allophanate hydrolase [Agrobacterium vitis S4]
gi|221737840|gb|ACM38736.1| Allophanate hydrolase [Agrobacterium vitis S4]
Length = 597
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 186/437 (42%), Gaps = 70/437 (16%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
+PL G+ FA+KD DV G T PD+ + E A VV LL GA IGKT LD+
Sbjct: 66 KPLWGIPFAVKDNIDVAGLPTTAACPDYA---YTPEIDATVVRLLKDAGALVIGKTNLDQ 122
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FA G+ G + P N P +PGGSSSGSAVA A +V FALGTDT G R+PA
Sbjct: 123 FATGLVGVRTPHAIPRNAIDPKLVPGGSSSGSAVATAQGIVSFALGTDTAGSGRIPAGLN 182
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIF 250
I+G +PS G +S GV+P ++LD V + A H+V V + +A + +R +
Sbjct: 183 NIVGLKPSVGALSATGVIPACRTLDCVSIFALTVEDAHKVFTVAAKHDAAD-AYSRTMPT 241
Query: 251 ADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPEN 310
L+ P L+ I V +K+ G E S E
Sbjct: 242 GH---ALASAPVLR-IGVPAKSDREFFGDSLME----------------------ASFEK 275
Query: 311 GTATLKALSSVMLSLQRYEF----KTIYE-EWVKS----------AKPRLGYNVFERVLE 355
A L A+ ++ L F +YE WV AKP + V ++
Sbjct: 276 ALAELSAMGHTLVDLPFSGFYEVANLLYEGAWVAERYAAVKEFFDAKPESFHPVTHKIYS 335
Query: 356 AIN--TTQDNIKILYKVRNEMRAALQRLLKDDKILVIPT---------VSDPPLKLNTKK 404
A T D +Y+++ ++ L ++ ++ +PT + P+K N++
Sbjct: 336 AAKTLTAADAFSGMYRLQ-ALKQQLAPVIASVDVICVPTAPTHYTLADLEAEPIKANSRL 394
Query: 405 TYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEH-PISISFITYHGGDKFLLDTVLDLY 463
F + + C +A+P G N+ P S++ + G D L+
Sbjct: 395 GTYTNFVN----------LLDMCGIAVPTGTRNDGLPSSVTLLAPFGADGLTAALGSALH 444
Query: 464 DSLQEQVNIASNLVPLP 480
+ L I + PLP
Sbjct: 445 NRL--GTTIGATGWPLP 459
>gi|398913724|ref|ZP_10656583.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM49]
gi|398179809|gb|EJM67408.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM49]
Length = 449
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 98/158 (62%), Gaps = 3/158 (1%)
Query: 68 AARQP--LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGK 125
A R P LAGL +IKD+FDVKG VT GS A+ A+ V+ L GA +G+
Sbjct: 61 AGRVPSLLAGLPVSIKDLFDVKGQVTRAGSI-LLDTAMPAKADAIAVSRLRAAGAILLGR 119
Query: 126 TVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
T + EFAF G N HYGTP Q PS + GGSSSG+AV+V + LGTDT G VR+
Sbjct: 120 TNMSEFAFSGLGLNPHYGTPRVRQAPSRVAGGSSSGAAVSVVEGMAVAGLGTDTGGSVRI 179
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
P++FCG+ G++P+ V + G P +QSLD++G LA +
Sbjct: 180 PSAFCGLTGFKPTASRVPLDGAFPLAQSLDSIGPLAHS 217
>gi|221065103|ref|ZP_03541208.1| Amidase [Comamonas testosteroni KF-1]
gi|220710126|gb|EED65494.1| Amidase [Comamonas testosteroni KF-1]
Length = 454
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 97/157 (61%), Gaps = 5/157 (3%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
AR PL GL ++KD+FD+ G+ T G D A +TA VV L + GA +G T +
Sbjct: 66 ARSPLEGLPISVKDLFDIAGHPT-LGGSRLLADAAPATQTAEVVQRLRRAGAVIVGTTNM 124
Query: 129 DEFAFGITGENKHYGTPVNPQMPSH----IPGGSSSGSAVAVAAQLVDFALGTDTIGCVR 184
EFA+ G N HYGTP NP + IPGGSSSG+A++V + A+G+DT G VR
Sbjct: 125 TEFAYSGLGLNPHYGTPRNPWQRENDGGRIPGGSSSGAAISVTDGMALAAIGSDTGGSVR 184
Query: 185 VPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLA 221
+P++ CG+ G++P+ V M GVLP S +LD++G LA
Sbjct: 185 IPSALCGLTGFKPTARRVPMQGVLPLSANLDSIGPLA 221
>gi|158425811|ref|YP_001527103.1| amidase [Azorhizobium caulinodans ORS 571]
gi|158332700|dbj|BAF90185.1| putative Glu-tRNA amidotransferase [Azorhizobium caulinodans ORS
571]
Length = 449
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 187/399 (46%), Gaps = 36/399 (9%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA P AG+ AIKD+FDV G VT GS + A A V L G IG++
Sbjct: 65 AAPSPFAGIPVAIKDLFDVAGEVTTSGS-KVLASNTPATADATAVARLRNAGFVVIGRSN 123
Query: 128 LDEFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
+ EFA+ G N HYGTP +P + +PGGS+SG AVAVA ALGTDT G R+
Sbjct: 124 MVEFAYSGLGLNPHYGTPKSPWKRDEGRVPGGSTSGGAVAVADGFAHLALGTDTGGSCRI 183
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ--LNAVEPR 243
PA+FCGI GY+P+ V G LP SQSLD++G L R+ + +L + A+EP
Sbjct: 184 PAAFCGITGYKPTASRVPQEGCLPLSQSLDSIGPLGRSVACCAAADAILAGAPVTALEP- 242
Query: 244 RARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRA 303
+ + L+ + + A+++L +PE + + + + S G R
Sbjct: 243 --------------ADLSGLRFLVPATVALDAL----DPEVASAFEAAVARI-SKAGARI 283
Query: 304 QSTSPENGTATLKALSSV--MLSLQRYEF-KTIYEEWVKSAKPRLGYNVFERVLEAINTT 360
T+P A + +++ + + Y + + + E PR+ + +R E
Sbjct: 284 V-TAPVPEFAEIAGINAKGGFTAAESYAWHRALLAEKEAEYDPRVSVRI-KRGRE--QEA 339
Query: 361 QDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVL--- 417
D I IL R+ + A R+ D +L +PTV+ P K+ + A + ++
Sbjct: 340 ADYIDILAARRSLIARANARIAPFDALL-MPTVAILPPKIADLASDDAAYAKANILSLRN 398
Query: 418 SSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
++ +M C +++PI + P+ + G D L
Sbjct: 399 CTLVNMIDGCAISLPIPAPGDAPVGLMVAAAGGMDARLF 437
>gi|424851475|ref|ZP_18275872.1| amidase [Rhodococcus opacus PD630]
gi|356666140|gb|EHI46211.1| amidase [Rhodococcus opacus PD630]
Length = 454
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 176/402 (43%), Gaps = 31/402 (7%)
Query: 67 PAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKT 126
P PLAG + A+ D++ V G G GS + TA VV LL GA +G
Sbjct: 77 PTGDGPLAGKRLAVTDLYAVAGQQIGAGSGRRLAEAPVETGTAAVVARLLGQGARVVGLA 136
Query: 127 VLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
D+ +G +G N+ +GTP NP+ +PGG++SG+A AVA D LG DT G VR+P
Sbjct: 137 QTDDLGYGHSGINQQFGTPPNPRAEDCLPGGATSGAASAVAQGAADIGLGVDTTGSVRIP 196
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRAR 246
AS+ G+ G+ PS G VS G+ P + + DT + + L V LL L A P R+
Sbjct: 197 ASYQGLYGFAPSRGAVSTDGLFPLAPTFDTPAWVCGDLDTLVAVSGALLPLTAETPFRS- 255
Query: 247 RLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQST 306
+ +D I +++ L + +L+ ++ S++P L T
Sbjct: 256 -ALTSDGINAVAEAGALGAVR------RALTAWEK-----------SSLPRL-------T 290
Query: 307 SPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKI 366
+ L ++++Q YE ++ +WV A LG A +
Sbjct: 291 WTDTDIGRLPDWYDAVVAVQGYEAWRLHGDWVGGAMTSLGDEPGRNFAAASRIWESTYGR 350
Query: 367 LYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDR---TLVLSSIGSM 423
+ E + + D +L+ T S P + T F + T +L+ + ++
Sbjct: 351 KLIMLGEASQTITAYVGDSLLLLPATSSTAPER--TSYPSGDRFRNTMRATGMLTCLATI 408
Query: 424 SGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDS 465
SG +P+ + P+ + + +G D+ +L V L D+
Sbjct: 409 SGLPNATVPLRTDDGVPVGLCLVGPYGRDRDVLAVVASLGDT 450
>gi|291549446|emb|CBL25708.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
[Ruminococcus torques L2-14]
Length = 496
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 112/197 (56%), Gaps = 5/197 (2%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ A+KD ++G +T S + + TA V L K GA IGKT +DEF
Sbjct: 70 PLAGVPVAVKDNMCIEGQLTTCSSKILS--NFKPTYTAEAVENLRKAGAVIIGKTNMDEF 127
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G T E +YG NP +H+PGGSS GS AVAA +ALG+DT G +R P+SFCG
Sbjct: 128 AMGSTTETSYYGPTRNPHNTAHVPGGSSGGSCAAVAASECYYALGSDTGGSIRQPSSFCG 187
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
++G +P++GTVS G++ SLD +G +A++ S +L + + +P+ + +
Sbjct: 188 VVGLKPTYGTVSRYGLIAYGSSLDQIGPVAKDVS---DCAAILEAIASHDPKDSTSMDRD 244
Query: 252 DDIFQLSKVPKLKTIHV 268
D F + V +K + +
Sbjct: 245 DCDFTEALVDDVKGLRI 261
>gi|296274229|ref|YP_003656860.1| allophanate hydrolase [Arcobacter nitrofigilis DSM 7299]
gi|296098403|gb|ADG94353.1| allophanate hydrolase [Arcobacter nitrofigilis DSM 7299]
Length = 598
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 102/179 (56%), Gaps = 3/179 (1%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
+ +PL G+ F +KD DV+G T P + + A+ A +V +L + GA CIGKT L
Sbjct: 64 SEKPLWGIPFTVKDNIDVEGIPTTAACPAY---EYIAKEDAFIVKVLKQAGAICIGKTNL 120
Query: 129 DEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPAS 188
D+FA G+ G YG P N IPGGSS GSAVAV+ QL F+LGTDT G R+PA+
Sbjct: 121 DQFATGLVGIRTPYGAPKNALDEKIIPGGSSCGSAVAVSHQLFSFSLGTDTAGSGRIPAA 180
Query: 189 FCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
++G +P+ G S GV+P ++DTV + A N + + + + + +P +R
Sbjct: 181 LNNLVGLKPTLGAFSKRGVVPACLTVDTVSVFALNIEDAYDIFEIASKHDEKDPYSKKR 239
>gi|257067691|ref|YP_003153946.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Brachybacterium faecium DSM 4810]
gi|256558509|gb|ACU84356.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Brachybacterium faecium DSM 4810]
Length = 461
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/154 (48%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R PL GL A+KD V G VT GS + R H AE A VV L +GA +G T L
Sbjct: 66 RGPLDGLPLAVKDNLAVAGRVTTMGSAIY-RSHLPAE-NAGVVDRLDTHGAVRLGATNLH 123
Query: 130 EFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
EFA G+T EN H+G NP PGGSS GSAVAV+A + ALG+DT G +R+PA+
Sbjct: 124 EFALGVTTENPHFGICRNPWDTERTPGGSSGGSAVAVSAGMALGALGSDTSGSIRIPAAA 183
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
CGI+G +P++G VS G P + SLD VG+L +
Sbjct: 184 CGIVGLKPTYGRVSSYGCYPEAWSLDHVGVLTQT 217
>gi|334116530|ref|ZP_08490622.1| allophanate hydrolase [Microcoleus vaginatus FGP-2]
gi|333461350|gb|EGK89955.1| allophanate hydrolase [Microcoleus vaginatus FGP-2]
Length = 604
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 110/209 (52%), Gaps = 32/209 (15%)
Query: 13 SNPKVWVVIGVSVVGFVVLAETLRRRRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQP 72
++P VW+ + LAETL R + LE + PQ + P
Sbjct: 41 ADPAVWIYL-------APLAETLERAKA------------LENLD----PQ------QLP 71
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ FAIKD D G T G P + R++ VV L GA IGKT +D+FA
Sbjct: 72 LYGIPFAIKDNLDWAGVPTTAGCPPFA---STPARSSAVVERLCAAGAIAIGKTNMDQFA 128
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G+ G YG NP +IPGGSSSGSA AV+A LV FALGTDT G RVPA+F I
Sbjct: 129 TGLVGTRTPYGVCRNPFDSRYIPGGSSSGSATAVSAGLVSFALGTDTAGSGRVPAAFTNI 188
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLA 221
+G +PS G++ G+LP +SLD V + A
Sbjct: 189 VGLKPSCGSIGTRGLLPAVRSLDCVSVFA 217
>gi|372269524|ref|ZP_09505572.1| hypothetical protein MstaS_00544 [Marinobacterium stanieri S30]
Length = 453
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 127/405 (31%), Positives = 190/405 (46%), Gaps = 38/405 (9%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
+ PL G+ A KD+FD+ VT GS A + A V G IGKT +
Sbjct: 69 KGPLDGVPIAWKDLFDLASMVTTAGSKILSST--PATKDARAVYNASAAGLVSIGKTNMT 126
Query: 130 EFAFGITGENKHYGTPVNPQM--PSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
E A+ G N H+GTP++ + +PGGSSSGSA+AVA +V A+GTDT G +RVPA
Sbjct: 127 ELAYSGLGLNPHFGTPLSIASGDKARVPGGSSSGSALAVAQGIVPAAIGTDTAGSLRVPA 186
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
+F G+ YRPS S GV P +++LDT+G++A H L A++
Sbjct: 187 AFNGLTSYRPSQARHSREGVTPLAKTLDTIGVIA----------HSLSDCIAIDDS---- 232
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASN-VPSLKGLRAQST 306
D++Q P+ T H A + PE +++ + +N + ++ LR+
Sbjct: 233 --MRGDMYQ----PRRPTPH---NACRFVVDTGLPERIDIEPAVWANLMQAVDTLRSAGY 283
Query: 307 SPENGT--ATLKALSSVMLS--LQRYEFKTIYEEWVKSA-KPRLGYNVFERVLEAINTTQ 361
E A + L + L L E Y V S+ R+ V R+ A + +
Sbjct: 284 RVEERKVGAVHETLDCIELHGWLGAVEAYAEYGHLVSSSLSDRMDPRVRHRLAAASDISG 343
Query: 362 DNIKILYKVRNEMRAALQRLLKDDKILVIPTVSD--PPLK-LNTKKTYSAEFHDRTLVLS 418
+ L++ RN + ALQR L + IL+ PTV+ P LK L A+ + +TL LS
Sbjct: 344 STLLTLFQTRNSLIDALQREL-EGAILITPTVAHVAPELKPLEADPELFAKTNLKTLKLS 402
Query: 419 SIGSMSGCCQVAIPIGKYNEHPI-SISFITYHGGDKFLLDTVLDL 462
+ S+ +A+P G SI T G D+ LL L++
Sbjct: 403 MVASLLDSPAIALPSGTDTAGQFTSIQLSTPKGDDEHLLRAALNV 447
>gi|170750954|ref|YP_001757214.1| allophanate hydrolase [Methylobacterium radiotolerans JCM 2831]
gi|170657476|gb|ACB26531.1| allophanate hydrolase [Methylobacterium radiotolerans JCM 2831]
Length = 601
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/179 (43%), Positives = 101/179 (56%), Gaps = 3/179 (1%)
Query: 64 PPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCI 123
PP A PL G+ FA+KD DV G T PD+ H TA V L GA I
Sbjct: 57 PPFDPATMPLWGVPFAVKDNIDVAGLPTTAACPDFA---HTPAETAPAVARLRAAGAILI 113
Query: 124 GKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCV 183
GKT LD+FA G+ G Y P N P+++PGGSSSGSAVAVA +V FALGTDT G
Sbjct: 114 GKTNLDQFATGLVGLRTPYPAPRNAIDPAYVPGGSSSGSAVAVAHGIVAFALGTDTAGSG 173
Query: 184 RVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
RVPA+ ++G +PS G +S G+LP ++LDT+ + A + V+L + +P
Sbjct: 174 RVPAALNNVVGLKPSLGAISSRGMLPACRTLDTLSVFAGTVADADAAFRVMLGPDGADP 232
>gi|398385175|ref|ZP_10543200.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Sphingobium sp. AP49]
gi|397721107|gb|EJK81657.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Sphingobium sp. AP49]
Length = 459
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 175/392 (44%), Gaps = 33/392 (8%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
P+ G +IKD+FDV G T GS D A A VV L + GA +GKT + EF
Sbjct: 82 PIDGAIVSIKDLFDVAGEPTRAGSLILA-DASPATVDAPVVARLKQAGAVIVGKTNMVEF 140
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
AF G N HYGTP NP + +PGGS+SG VAVA + + A+GTDT G R+PA+ CG
Sbjct: 141 AFSGVGANPHYGTPGNPADRARVPGGSTSGGGVAVADAMCEIAIGTDTGGSCRIPAALCG 200
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
++GY+P+ V G P S +LD++G +A + R +L RRL A
Sbjct: 201 VVGYKPTKARVPTDGAFPLSPTLDSIGPIATSVDACFRTDAILAG------ETPRRLDLA 254
Query: 252 DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNV-PSLKGLRA-QSTSPE 309
+ +P+ + + + + G ++ V P ++A QS P
Sbjct: 255 PLKGLRAGIPQGLPLADLDATVAARFADALARLGKAGVTLSDEVFPQFDAMQALQSPVP- 313
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
+ S++ Y I+ + + + V R+ + T + + +
Sbjct: 314 ------------IASIEAY---AIHRDRIATRAQDFDPIVLARMQAGRDVTPERHRQMLA 358
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAE--FHDRTLVL---SSIGSMS 424
R + ++ L +LV+PT P+ T+ + F R +L + +G++
Sbjct: 359 ERTALVRSMDARLAGLDMLVLPTT---PIVAPTQAEVANPDIFVARNRLLLRNTGLGNVF 415
Query: 425 GCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
C +++P+ + P+ + + G D+ L
Sbjct: 416 DLCAISLPLPRQGGLPVGLMLMARAGQDQRLF 447
>gi|240016436|ref|ZP_04722976.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Neisseria
gonorrhoeae FA6140]
gi|268599161|ref|ZP_06133328.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
gonorrhoeae MS11]
gi|268601507|ref|ZP_06135674.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
gonorrhoeae PID18]
gi|268686776|ref|ZP_06153638.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
gonorrhoeae SK-93-1035]
gi|293398951|ref|ZP_06643116.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
gonorrhoeae F62]
gi|268583292|gb|EEZ47968.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
gonorrhoeae MS11]
gi|268585638|gb|EEZ50314.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
gonorrhoeae PID18]
gi|268627060|gb|EEZ59460.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
gonorrhoeae SK-93-1035]
gi|291610365|gb|EFF39475.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
gonorrhoeae F62]
Length = 481
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 99/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL G +G+T +DEFA G T EN YG NP P H+PGG
Sbjct: 92 -MLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNPEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQA 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>gi|261400354|ref|ZP_05986479.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria lactamica
ATCC 23970]
gi|269209989|gb|EEZ76444.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria lactamica
ATCC 23970]
Length = 481
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 99/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITLNPEKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL G +G+T +DEFA G T EN YG NP P H+PGG
Sbjct: 92 -MLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGATKNPWNPEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQA 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>gi|421554955|ref|ZP_16000894.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 98008]
gi|421559230|ref|ZP_16005105.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 92045]
gi|402332108|gb|EJU67439.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 98008]
gi|402336625|gb|EJU71885.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 92045]
Length = 481
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 99/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL G +G+T +DEFA G T EN YG NP P H+PGG
Sbjct: 92 -MLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNPEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQA 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>gi|39934478|ref|NP_946754.1| allophanate hydrolase [Rhodopseudomonas palustris CGA009]
gi|39648327|emb|CAE26847.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Rhodopseudomonas
palustris CGA009]
Length = 608
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 99/172 (57%), Gaps = 3/172 (1%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
+PL G+ FA+KD DV G T P + E TA V LL GA IGKT LD+
Sbjct: 70 KPLWGIPFAVKDNIDVAGLPTTAACPGFASTPSE---TAFAVQRLLDAGAVLIGKTNLDQ 126
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FA G+ G Y P N P ++PGGSSSGSAV VA LV FALGTDT G RVPA+
Sbjct: 127 FATGLVGVRTPYPVPRNAIDPRYVPGGSSSGSAVVVAHGLVTFALGTDTAGSGRVPAALN 186
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
I+G +PS G+VS G++P ++LDT+ + A + H V V+ + +P
Sbjct: 187 NIVGLKPSLGSVSSRGMVPACRTLDTISVFAGTVADAHAVYGVIAAFDREDP 238
>gi|409440848|ref|ZP_11267843.1| Amidase [Rhizobium mesoamericanum STM3625]
gi|408747143|emb|CCM79038.1| Amidase [Rhizobium mesoamericanum STM3625]
Length = 454
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 123/403 (30%), Positives = 187/403 (46%), Gaps = 36/403 (8%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
+R L G+ A KD+FD+KG T GS A+ A VV L + G IG T +
Sbjct: 68 SRGMLDGIPIAWKDLFDIKGRTTTAGSTVLA-SGPVAQADATVVATLEQAGMVSIGCTNM 126
Query: 129 DEFAFGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
EFAF G N HYGTP NP+ IPGGSSSG+ V VAA LV A+GTDT G VR+P
Sbjct: 127 SEFAFSGLGINPHYGTPHNPRSSDVPRIPGGSSSGAGVVVAAGLVPVAMGTDTGGSVRIP 186
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA--SILHRVGHVLLQLNAVEPRR 244
A+ GI+GY+ + G M GV P ++SLD++G L R ++ G ++ AV
Sbjct: 187 AALNGIVGYKATWGRYPMTGVYPLAKSLDSLGPLTRTVQDAVWIDAG---MRGAAVPSIV 243
Query: 245 ARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQ 304
AR L D + + V V++ A E+ + E ++ ++ +P+ + A
Sbjct: 244 ARPLKGLDIVIPDNVVLDGAEAGVVA-AFETAVDWLAAEGASISRF---RIPAFDEILAL 299
Query: 305 STSPENGTATLKAL-SSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDN 363
AT AL ++ +L R E + + V R+ T+ N
Sbjct: 300 -------MATYGALVTAEAFALHR-------ERLSGPQAADMDHRVVMRIKLGEKTSLSN 345
Query: 364 IKILYKVRNEMRAALQRLLKDDKILVIPTVSD-----PPLKLNTKKTYSAEFHDRTLVLS 418
+ R ++ A ++RL+ D + PTV+ PL+ N ++ + +TL +
Sbjct: 346 YLAILDAREKLIADVERLVG-DSFVAFPTVAHVAPPIAPLEANDDLFFAT--NGKTLRNT 402
Query: 419 SIGSMSGCCQVAIPIGKYN-EHPISISFITYHGGDKFLLDTVL 460
+G+ C V+IP G + + P+ D+ LL L
Sbjct: 403 MLGNFLDWCGVSIPCGTGDADMPVGFLLSAMRKRDEALLSAAL 445
>gi|194098807|ref|YP_002001870.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Neisseria
gonorrhoeae NCCP11945]
gi|254493876|ref|ZP_05107047.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
gonorrhoeae 1291]
gi|268594936|ref|ZP_06129103.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
gonorrhoeae 35/02]
gi|268596685|ref|ZP_06130852.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
gonorrhoeae FA19]
gi|268603845|ref|ZP_06138012.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
gonorrhoeae PID1]
gi|268684466|ref|ZP_06151328.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
gonorrhoeae SK-92-679]
gi|291043648|ref|ZP_06569364.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
gonorrhoeae DGI2]
gi|385335846|ref|YP_005889793.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Neisseria
gonorrhoeae TCDC-NG08107]
gi|229486006|sp|B4RM85.1|GATA_NEIG2 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|193934097|gb|ACF29921.1| putative Glu-tRNA(Gln) amidotransferase subunit [Neisseria
gonorrhoeae NCCP11945]
gi|226512916|gb|EEH62261.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
gonorrhoeae 1291]
gi|268548325|gb|EEZ43743.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
gonorrhoeae 35/02]
gi|268550473|gb|EEZ45492.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
gonorrhoeae FA19]
gi|268587976|gb|EEZ52652.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
gonorrhoeae PID1]
gi|268624750|gb|EEZ57150.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
gonorrhoeae SK-92-679]
gi|291012111|gb|EFE04100.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
gonorrhoeae DGI2]
gi|317164389|gb|ADV07930.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Neisseria
gonorrhoeae TCDC-NG08107]
Length = 481
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 99/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL G +G+T +DEFA G T EN YG NP P H+PGG
Sbjct: 92 -MLDNFVSPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNPEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQA 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>gi|304387329|ref|ZP_07369521.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis ATCC 13091]
gi|304338580|gb|EFM04698.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis ATCC 13091]
Length = 481
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 99/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL G +G+T +DEFA G T EN YG NP P H+PGG
Sbjct: 92 -MLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNPEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQA 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>gi|421563556|ref|ZP_16009375.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM2795]
gi|421907086|ref|ZP_16336974.1| aspartyl-tRNA amidotransferase subunit A [Neisseria meningitidis
alpha704]
gi|393292050|emb|CCI72947.1| aspartyl-tRNA amidotransferase subunit A [Neisseria meningitidis
alpha704]
gi|402341252|gb|EJU76439.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM2795]
Length = 481
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 99/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITLNPEKTLAEARAADKRIAQGNASALTGVPVAYKDIFCQTGWRSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL G +G+T +DEFA G T EN YG NP P H+PGG
Sbjct: 92 -MLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNPEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQA 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>gi|384438679|ref|YP_005653403.1| Amidase/amidotransferase [Thermus sp. CCB_US3_UF1]
gi|359289812|gb|AEV15329.1| Amidase/amidotransferase [Thermus sp. CCB_US3_UF1]
Length = 434
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 174/391 (44%), Gaps = 33/391 (8%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R PL GL +KD+F VKG T G+ + A V L + GA KT +
Sbjct: 62 RGPLHGLPLTVKDLFPVKGMPTRAGT---QAPLPPLPEEAQAVRRLKEAGALIFAKTHMH 118
Query: 130 EFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
E A GITGEN G N P+ GGSS GSAVAVA + +LGTDT G +R+PA+F
Sbjct: 119 EIALGITGENPWTGPVRNAIDPTRQAGGSSGGSAVAVALGIGLASLGTDTGGSIRIPAAF 178
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
G++G++PS G +S+ G LP S+S D G LAR R H L + I
Sbjct: 179 NGVVGFKPSFGRISLEGALPLSRSTDHAGPLARTV----RDAHFLTE------------I 222
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
A + L P+ T V ++ L G Q + ++P L+ + + P
Sbjct: 223 LAGESIPLEG-PQNPTFGV---PLDFLEGRLGQGVRKAFQRLLEDLPLLRAEVREVSLP- 277
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
L V L RYE I+E+ +K +V E +L + T+ + +
Sbjct: 278 -----LPGAYEVYTRLVRYEAARIHEKALKEHPEGFSPSVREALLAGLALTEKDYRDAVA 332
Query: 370 VRNEMRAALQRLLKDDKILVIPT--VSDPPLKLNTKKTYSAEFHDRT--LVLSSIGSMSG 425
R +R +L + L+ L++P + PPL + S R L L+ S+ G
Sbjct: 333 EREALRLSLTKALRGVDALLLPVQPLPAPPLGTEEVELESGRKGHREAFLTLTLPFSLLG 392
Query: 426 CCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+++P + + P+ + + + D +L
Sbjct: 393 VPALSLPFARVDGMPVGLQVVGPYAEDGKVL 423
>gi|121635062|ref|YP_975307.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Neisseria
meningitidis FAM18]
gi|416177881|ref|ZP_11610250.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis M6190]
gi|416191909|ref|ZP_11616290.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis ES14902]
gi|433492749|ref|ZP_20449842.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM586]
gi|433494883|ref|ZP_20451951.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM762]
gi|433497049|ref|ZP_20454087.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis M7089]
gi|433499111|ref|ZP_20456120.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis M7124]
gi|433501087|ref|ZP_20458073.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM174]
gi|433503078|ref|ZP_20460039.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM126]
gi|166217690|sp|A1KUH8.1|GATA_NEIMF RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|120866768|emb|CAM10521.1| Glu-tRNA(Gln) amidotransferase subunit A [Neisseria meningitidis
FAM18]
gi|325132451|gb|EGC55144.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis M6190]
gi|325138225|gb|EGC60794.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis ES14902]
gi|432228535|gb|ELK84235.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM586]
gi|432230086|gb|ELK85765.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM762]
gi|432233542|gb|ELK89169.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis M7089]
gi|432234945|gb|ELK90565.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis M7124]
gi|432236378|gb|ELK91987.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM174]
gi|432239843|gb|ELK95387.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM126]
Length = 481
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 99/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL G +G+T +DEFA G T EN YG NP P H+PGG
Sbjct: 92 -MLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNPEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQA 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>gi|299769940|ref|YP_003731966.1| glutamyl-tRNA(Gln) amidotransferase subunit A(Glu-ADTsubunit A)
[Acinetobacter oleivorans DR1]
gi|298700028|gb|ADI90593.1| Glutamyl-tRNA(Gln) amidotransferase subunit A(Glu-ADTsubunit A)
[Acinetobacter oleivorans DR1]
Length = 369
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 188/395 (47%), Gaps = 43/395 (10%)
Query: 76 LKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGI 135
LK +KD D++G T GS + A+ A VV +LK I KT L E AFGI
Sbjct: 15 LKVMVKDTIDIQGLKTIAGSRAL-LNVEPAQDDAEVVKNILKADCEIIAKTNLHELAFGI 73
Query: 136 TGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGY 195
TG N +GTP+NP+ IPGGSSSGSA AVAA+ DF LGTDT G +R+PA+ CG+ G
Sbjct: 74 TGINHAFGTPINPKYSELIPGGSSSGSAAAVAAKQADFTLGTDTGGSIRMPAACCGVFGL 133
Query: 196 RPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIF 255
+P+ G VS GV P S SLD VG A + ++ + ++ D F
Sbjct: 134 KPTFGRVSRKGVYPPSSSLDCVGPFANSVEMIEKAMQII-----------------DPTF 176
Query: 256 ---QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGT 312
+ ++ PK+ + V + + +Q +L+ QSTS +
Sbjct: 177 KPTEFTRTPKIAVLDVKADEVVWNCIHQ----------------ALQKANLQSTSEK--V 218
Query: 313 ATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRN 372
+A + + YE + E ++ +G +V R+L+A +TT + +K V+
Sbjct: 219 EHFEAAYDAGMQIINYENWQAFGELTQTG--LIGSDVNGRLLKAAHTTLEQVKQAEVVKA 276
Query: 373 EMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIP 432
++ L LL+ LV+PT+ P K++ + A + LV ++SG +++P
Sbjct: 277 QLTQELDALLEKYDALVLPTLPQIPPKVSEAENTVAFLNLTGLVRPF--NLSGHPVISVP 334
Query: 433 IGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
+ P+ + ++ H D+ L D++Q
Sbjct: 335 LETSEGLPVGLQIVSKHQKDEQLCAIAKFCVDAMQ 369
>gi|298368771|ref|ZP_06980089.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria sp. oral
taxon 014 str. F0314]
gi|298282774|gb|EFI24261.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria sp. oral
taxon 014 str. F0314]
Length = 485
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 90/152 (59%), Gaps = 2/152 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A KD+F G+ + GS D+ + TA VV LL G +G+T +DEFA
Sbjct: 68 LTGVPIAYKDIFCQTGWRSACGSK--MLDNFVSPYTATVVQNLLNEGMVTLGRTNMDEFA 125
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G T E YG NP P H+PGGSS GSA VAA+L ALG+DT G +R PAS CGI
Sbjct: 126 MGSTNETSFYGATKNPWNPEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGI 185
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
G +P++GTVS G++ + S D G +A+ A
Sbjct: 186 TGIKPTYGTVSRFGMVAYASSFDQAGPMAQTA 217
>gi|385340256|ref|YP_005894128.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis G2136]
gi|416203837|ref|ZP_11620123.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis 961-5945]
gi|433467497|ref|ZP_20424951.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 87255]
gi|325142536|gb|EGC64936.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis 961-5945]
gi|325198500|gb|ADY93956.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis G2136]
gi|432202331|gb|ELK58395.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 87255]
Length = 481
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 99/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL G +G+T +DEFA G T EN YG NP P H+PGG
Sbjct: 92 -MLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNPEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQA 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>gi|385323982|ref|YP_005878421.1| aspartyl-tRNA(Asn) amidotransferase subunit A (Asp-ADT subunit A)
[Neisseria meningitidis 8013]
gi|261392369|emb|CAX49909.1| aspartyl-tRNA(Asn) amidotransferase subunit A (Asp-ADT subunit A)
[Neisseria meningitidis 8013]
Length = 481
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 99/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL G +G+T +DEFA G T EN YG NP P H+PGG
Sbjct: 92 -MLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNPEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQA 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>gi|422110301|ref|ZP_16380363.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309378844|emb|CBX22549.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 481
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 99/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITLNPEKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL G +G+T +DEFA G T EN YG NP P H+PGG
Sbjct: 92 -MLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGATKNPWNPEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGISGIKPTYGTVSRFGMVAYASSFDQA 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>gi|240013995|ref|ZP_04720908.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Neisseria
gonorrhoeae DGI18]
gi|240121561|ref|ZP_04734523.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Neisseria
gonorrhoeae PID24-1]
Length = 481
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 99/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL G +G+T +DEFA G T EN YG NP P H+PGG
Sbjct: 92 -MLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNPEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQA 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>gi|403052113|ref|ZP_10906597.1| glutamyl-tRNA(Gln) amidotransferase subunit A(Glu-ADTsubunit A)
[Acinetobacter bereziniae LMG 1003]
Length = 370
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 185/383 (48%), Gaps = 40/383 (10%)
Query: 75 GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFG 134
LK +KD D++G T GS + A + A VV +L KT L E AFG
Sbjct: 14 ALKVMVKDSIDIQGMKTMAGS-QALMNTPAATQNAEVVDRILAADCQITAKTNLHELAFG 72
Query: 135 ITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILG 194
ITG N H+GT +NP+ P IPGGSSSGSA AVAA L DF LGTDT G +R+PA+ CG+ G
Sbjct: 73 ITGINHHFGTAINPKYPELIPGGSSSGSAAAVAAGLADFTLGTDTGGSIRMPAACCGVYG 132
Query: 195 YRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDI 254
+P+ VS GV P SLD VG A + +++ + ++P +
Sbjct: 133 LKPTFDRVSRQGVHPAVSSLDCVGPFAMSVNMIETAMQI------IDPSF-------HPL 179
Query: 255 FQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSP--ENGT 312
L++ PKL + V + A+ + QN Y+A +L ++++ P E G
Sbjct: 180 TDLAQAPKLAWLDVSADAV-VIESIQN--------YLAKANLTLTKVKSKWFDPAFEAG- 229
Query: 313 ATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRN 372
+ + YE Y ++ +G +V R+L+A TT D ++ +++
Sbjct: 230 ----------MQIINYENWQAYAALTETG--LVGADVNGRLLKAAQTTMDQVQQAEQIKA 277
Query: 373 EMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIP 432
+A + LL L++PT+ P K++ + A + +LV ++SG ++IP
Sbjct: 278 NFKAEIDALLAQFDALILPTLPQIPPKVSEAENTVAFLNLTSLVRPF--NLSGHPAISIP 335
Query: 433 IGKYNEHPISISFITYHGGDKFL 455
+ + PI + + D++L
Sbjct: 336 LETASGLPIGLQIVAKQNADEYL 358
>gi|225025269|ref|ZP_03714461.1| hypothetical protein EIKCOROL_02166 [Eikenella corrodens ATCC
23834]
gi|224942027|gb|EEG23236.1| hypothetical protein EIKCOROL_02166 [Eikenella corrodens ATCC
23834]
Length = 482
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 90/152 (59%), Gaps = 2/152 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A KD+F G+ + GS D+ + TA VV LL G +G+T +DEFA
Sbjct: 68 LTGVPIAYKDIFCQTGWRSACGSK--MLDNFVSPYTATVVQNLLDEGMVTLGRTNMDEFA 125
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G T E YG NP P H+PGGSS GSA VAA+L ALG+DT G +R PAS CGI
Sbjct: 126 MGSTNETSFYGATKNPWNPEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGI 185
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
G +P++GTVS G++ + S D G +A+ A
Sbjct: 186 TGIKPTYGTVSRFGMVAYASSFDQAGPMAQTA 217
>gi|429220977|ref|YP_007182621.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase
subunit A [Deinococcus peraridilitoris DSM 19664]
gi|429131840|gb|AFZ68855.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A
subunit [Deinococcus peraridilitoris DSM 19664]
Length = 484
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 97/156 (62%), Gaps = 2/156 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ +KD +VKG T GS + H + TA V L++ GA +GK +DEF
Sbjct: 64 PLAGVPVVVKDNLNVKGTRTTCGSRALENYH--SPYTATAVQRLIEAGAVVVGKANMDEF 121
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G + EN +G NP + +PGGSS GSAVAVAA +V ALG+DT G VR PA+F G
Sbjct: 122 AMGSSSENSAFGVVRNPWDHTRVPGGSSGGSAVAVAAGMVPVALGSDTGGSVRQPAAFNG 181
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASIL 227
+ G++P++G VS G++ + SLD +G AR+A L
Sbjct: 182 VYGFKPTYGRVSRYGLVAYASSLDQIGPFARSAEDL 217
>gi|378951512|ref|YP_005209000.1| asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase
[Pseudomonas fluorescens F113]
gi|359761526|gb|AEV63605.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase
[Pseudomonas fluorescens F113]
Length = 451
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 191/407 (46%), Gaps = 39/407 (9%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ +A+KD+ DV G T GS + D A A V+ L G +GKT L EFA
Sbjct: 64 LDGIPYAVKDLLDVAGSRTTAGSIT-RIDAPMAAVDAAVIAALTAQGMIPMGKTNLTEFA 122
Query: 133 FGITGENKHYGTPVNPQM--PSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
+ G N H+GTPV+ M S +PGGSSSGSA+AV +V A+GTDT G +R+PA+F
Sbjct: 123 YSGLGLNPHFGTPVSDLMGDDSRVPGGSSSGSAIAVQRGIVSSAIGTDTAGSIRIPAAFN 182
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIF 250
G++GY+ S G SM GV P + +LD++G AR + + + + V
Sbjct: 183 GLVGYKASTGRYSMAGVHPLAVTLDSLGSFARTVADCAALDAAMRGFSGV---------- 232
Query: 251 ADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPEN 310
+ Q + + L+ ++ + + Q H N+ V ++ LR E
Sbjct: 233 ---VIQAANLSGLR--FLVDDGVMADPALQPAVHHNL-------VSMMERLREAGAQVEY 280
Query: 311 GTATLKALSSVMLSLQRYEFKTIYEEWV---KSAKPRLGYNVFERVLEAINTTQD-NIKI 366
T A + ++S R + E W + LG + RV + + ++ ++
Sbjct: 281 RTIVTVAHTRELIS--RSGWLGAIEAWRLLGPVVEGPLGARMDRRVQARLRSAKEIDLAT 338
Query: 367 LYKVRNEMRAALQRLLKDD---KILVIPTVSD--PPLK-LNTKKTYSAEFHDRTLVLSSI 420
++R+ +R L ++D+ ILV+PTV PP+ L A + TL L+ I
Sbjct: 339 EARIRH-LREGLMAAIEDELDGAILVMPTVKHVAPPMAPLENDDALFAAVNLETLSLTMI 397
Query: 421 GSMSGCCQVAIPIGKYNEH-PISISFITYHGGDKFLLDTVLDLYDSL 466
GS+ VAIP GK + S F T G D LL L + +L
Sbjct: 398 GSLLDMPGVAIPSGKDSVGLATSTLFSTTRGHDDQLLSAALAIESTL 444
>gi|398376672|ref|ZP_10534854.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium sp. AP16]
gi|397727866|gb|EJK88290.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium sp. AP16]
Length = 455
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 107/179 (59%), Gaps = 3/179 (1%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
+R L G+ A KD+F ++G T GS R+ +E A +V L + G +G+ +
Sbjct: 68 SRGLLDGIPIAWKDLFAIRGLPTTAGSTVLAREAPASE-DADIVQALAEAGMVSVGRVNM 126
Query: 129 DEFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
EFAF G N HYGTP+NP + +PGGSSSGSAVAVAA LV ++GTDT G VR+P
Sbjct: 127 SEFAFSGLGLNPHYGTPLNPLSKDVERVPGGSSSGSAVAVAAGLVPVSIGTDTGGSVRIP 186
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRA 245
++F G++GY+ S G SM GV P + SLD++G L R+ V + +L A + RA
Sbjct: 187 SAFNGLVGYKASRGRYSMAGVFPLATSLDSLGPLCRSVQDAIWVDAAMRRLTAPQIVRA 245
>gi|254805149|ref|YP_003083370.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Neisseria
meningitidis alpha14]
gi|254668691|emb|CBA06430.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Neisseria
meningitidis alpha14]
Length = 481
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 99/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITLNPEKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL +G+T +DEFA G T EN YG NP P H+PGG
Sbjct: 92 -MLDNFISPYTATVVQNLLDESMVTLGRTNMDEFAMGSTNENSFYGATKNPWNPEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSAV VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAVVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQA 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>gi|398867113|ref|ZP_10622582.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM78]
gi|398237968|gb|EJN23706.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM78]
Length = 372
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 117/365 (32%), Positives = 168/365 (46%), Gaps = 47/365 (12%)
Query: 75 GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFG 134
G + AIKD D+ GY T GS + D A + A VV +L G +GKT L E AFG
Sbjct: 14 GKRVAIKDSIDIAGYPTRSGSRAFA-DAPAATKNAEVVDAILNAGWQIVGKTNLHELAFG 72
Query: 135 ITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILG 194
+TG N GTPVNPQ P +PGGSSSGSA AVAA L D ALGTDT G VRVPA+ CGI G
Sbjct: 73 VTGINDWTGTPVNPQAPDRVPGGSSSGSASAVAAGLADIALGTDTGGSVRVPAACCGIAG 132
Query: 195 YRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVE--PRRARRLIFAD 252
+P++G VS IG P SLD VG AR L V+ ++ P ++ F D
Sbjct: 133 LKPTYGRVSRIGAHPLESSLDCVGPFARTMEDLIAAMQVICPGFNMQGLPGDGAKVGFLD 192
Query: 253 DIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGT 312
V + A +G++ H+ + ++ A+ L +
Sbjct: 193 -------VACDAHLQASLGAAADRAGWRR-SHLQLSEFEAAFAAGLTVIN---------- 234
Query: 313 ATLKALSSVMLSLQRYEFKTIYEEWVK----SAKPRLGYNVFERVLEAINTTQDNIKILY 368
+E W + K +G +V R+L A TT++ +
Sbjct: 235 ---------------------FENWAAFGHLTGKGLIGADVETRLLAASRTTREELAEAE 273
Query: 369 KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQ 428
VR + L+D +L++PT+ P L+ ++ S T ++ ++SG
Sbjct: 274 AVRTRFTQQVDAALEDFAVLLLPTMPSLPPTLSEARSGSKAVAGMTPLVRPF-NLSGHPA 332
Query: 429 VAIPI 433
+ +P+
Sbjct: 333 LTVPV 337
>gi|313668490|ref|YP_004048774.1| Glu-tRNAGln amidotransferase subunit A [Neisseria lactamica 020-06]
gi|313005952|emb|CBN87409.1| Glu-tRNAGln amidotransferase subunit A [Neisseria lactamica 020-06]
Length = 481
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 99/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITLNPEKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL +G+T +DEFA G T EN YG NP P H+PGG
Sbjct: 92 -MLDNFISPYTATVVQNLLDESMVTLGRTNMDEFAMGSTNENSFYGATKNPWNPEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSAV VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAVVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQA 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>gi|330835108|ref|YP_004409836.1| amidase [Metallosphaera cuprina Ar-4]
gi|329567247|gb|AEB95352.1| amidase [Metallosphaera cuprina Ar-4]
Length = 388
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 183/404 (45%), Gaps = 58/404 (14%)
Query: 49 FGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERT 108
+ AF+ FE PLAGL F +KDV + +G T GS + ++ +R
Sbjct: 12 YNAFITTFE--------KKGGDGPLAGLTFGVKDVIETEGIKTTAGSRILR--NNVPKRD 61
Query: 109 AVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAA 168
A +V +L G T +GKT EFA G T + G NP+ I GGSS GSAVAVA
Sbjct: 62 AWIVKAILSAGGTILGKTNTHEFAIGATNTSSLVGPARNPRDKERISGGSSGGSAVAVAL 121
Query: 169 QLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILH 228
+VD +GTDT G +R+PAS CG++GY+PS+G GV+P S SLDT+G L R+ L
Sbjct: 122 NMVDVGVGTDTGGSIRIPASLCGVIGYKPSYGVFPTEGVIPFSWSLDTIGFLTRDLETLW 181
Query: 229 RVGHVLLQLNAVE-----PRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPE 283
+L + V+ R + R+ +F + K V+ K +E + N +
Sbjct: 182 MTIKGILPASKVKYFLQYVRSSPRV----GLFMFDETTK----DVLEKVLEF---FPNSK 230
Query: 284 HMNVGQYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKP 343
+N LR + K S V + E + + W+K+ +
Sbjct: 231 EVN--------------LRLMT----------KYGSQVRRIIAGSEGASYHTTWLKTMRD 266
Query: 344 RLGYNVFERVLEAINTTQDNIKILY----KVRNEMRAALQRLLKDDKILVIPTVSDPPLK 399
F VL+ +++ Q + Y ++R + R D +++ PT K
Sbjct: 267 MY----FPDVLKVLDSGQKTSAVDYINSLRMRKLILEEYVRTFNDFDVIISPTTKITAPK 322
Query: 400 LNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISI 443
++ AEF D + ++ + ++ G +++PI + PI I
Sbjct: 323 ISEVLGKEAEFRDGLVSITELFNLVGAPSISVPIMERQGLPIGI 366
>gi|414167803|ref|ZP_11424007.1| hypothetical protein HMPREF9696_01862 [Afipia clevelandensis ATCC
49720]
gi|410887846|gb|EKS35650.1| hypothetical protein HMPREF9696_01862 [Afipia clevelandensis ATCC
49720]
Length = 432
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 183/397 (46%), Gaps = 34/397 (8%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
++R PL G IKD+FDVKG VT GS AE AV+V L + GA KT
Sbjct: 50 SSRGPLDGAILTIKDLFDVKGEVTRAGSRVLASRGKPAEADAVIVQRLREAGAVIAAKTN 109
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
+ EFA+ G N H+GTP NP +PGGSSSG+AVA A + A+GTDT G R+PA
Sbjct: 110 MTEFAYSGLGANPHFGTPGNPADRRRVPGGSSSGAAVAAADAFCEIAIGTDTGGSTRIPA 169
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
+FCG+ G++P+ V G P S +LD++G +AR+ + VL
Sbjct: 170 AFCGVTGFKPTVKRVPRAGAFPLSFTLDSIGPIARSVADCADADAVL------------- 216
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
A + P LK + + G + Q +A P K
Sbjct: 217 ---AGETPSPLASPSLKDVRAGFVQGYPIDGLDDIVGKAYPQALAKLAPHWK-------- 265
Query: 308 PENGTATLKALSSVMLSLQRY-----EFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQD 362
TLKAL + + +R E I+ + A + NV R+L + +
Sbjct: 266 -SGADVTLKALDIMHTANERGGVAPPEAYAIHRTLLAEAGEGVDPNVRARLLRSEKISAA 324
Query: 363 NIKILYKVRNEMRAALQRLLKDDKILVIPTVS--DPPL-KLNTKKTYSAEFHDRTLVLSS 419
+ + + R A + + +LV+PTV P + +++T ++++ + + + L+ +S
Sbjct: 325 DYILALRDRERGIAQMDAVFDQVDVLVMPTVQIVAPTMDEISTPESFN-KRNVQALMNTS 383
Query: 420 IGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
I + C +++PI N P+ + + HG D+ LL
Sbjct: 384 IWNFFDVCAISLPIRFGNALPVGLMLVGRHGDDRRLL 420
>gi|359397012|ref|ZP_09190062.1| Urea amidolyase [Halomonas boliviensis LC1]
gi|357968806|gb|EHJ91255.1| Urea amidolyase [Halomonas boliviensis LC1]
Length = 606
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 94/155 (60%), Gaps = 5/155 (3%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ FA+KD D+ G T GSP + E A VV L+ GA +GKT LD+F
Sbjct: 68 PLYGIPFAMKDNIDLAGIPTTAGSPAYAYTPTE---NAFVVQQLIDAGAIPMGKTNLDQF 124
Query: 132 AFGITGEN--KHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A G+ GE + YGTP N P+ +PGGSSSGSAV AA +V FALGTDT G RVPA F
Sbjct: 125 ATGLVGERALEVYGTPANAFDPTLVPGGSSSGSAVVTAAGMVSFALGTDTAGSGRVPACF 184
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
+ G +PS G +S GV+P +LDT+ L A A
Sbjct: 185 HNLYGVKPSLGLLSTRGVVPACATLDTISLFALTA 219
>gi|357417637|ref|YP_004930657.1| amidase [Pseudoxanthomonas spadix BD-a59]
gi|355335215|gb|AER56616.1| amidase [Pseudoxanthomonas spadix BD-a59]
Length = 477
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/196 (45%), Positives = 112/196 (57%), Gaps = 7/196 (3%)
Query: 39 RNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDW 98
RNP L AF F + P Q A LAG+ FA+KD+FDV+G T G+
Sbjct: 69 RNPALM------AFTRIFAVDPSGQGVRTPAEGALAGVPFAVKDLFDVQGLPTTAGA-AM 121
Query: 99 KRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGS 158
+ D A R A VV L GA +G T +DEFA+G N H+GT NP P+ + GGS
Sbjct: 122 RVDAAPAARDAEVVRRLKAAGAVLVGTTNMDEFAYGFATVNAHFGTTRNPHDPARLAGGS 181
Query: 159 SSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVG 218
S GSA AVAA LV FALG+DT G +RVPA+ CGI G R +HG V + GV P Q+LD G
Sbjct: 182 SGGSAAAVAAGLVQFALGSDTNGSIRVPAALCGIYGLRSTHGQVPLQGVFPFVQALDVAG 241
Query: 219 LLARNASILHRVGHVL 234
AR+ +L V V+
Sbjct: 242 PFARSLDLLQTVHEVM 257
>gi|73668422|ref|YP_304437.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Methanosarcina
barkeri str. Fusaro]
gi|109891955|sp|Q46E35.1|GATA_METBF RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|72395584|gb|AAZ69857.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
[Methanosarcina barkeri str. Fusaro]
Length = 475
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 183/402 (45%), Gaps = 44/402 (10%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ AIKD V G GS + + A V+ LL GA +GKT +DEF
Sbjct: 60 PLAGVPIAIKDNISVVGLPNSCGSK--ILEDYIPPFNAYVIEKLLAAGAVILGKTNMDEF 117
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G + E ++G NP +PGGSS GSA VAA FALG+DT G VR PA+FCG
Sbjct: 118 AMGSSTETSYFGPTANPWDLERVPGGSSGGSAAVVAAGEAPFALGSDTGGSVRCPAAFCG 177
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
++G +P++G VS GV+ + SL+ VG LA N + + VL+ + A R+ I +
Sbjct: 178 VVGLKPTYGAVSRYGVVAYANSLEQVGPLANNVTDI----AVLMDVIAGYDRKDSTSIDS 233
Query: 252 DDIFQLSKVPKLKTIHV-ISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRA---QSTS 307
+Q + + +K + + + K + H +V + + + + + L A + +
Sbjct: 234 KTEYQKALIEDVKGLKIGVPKEF-----FGEGIHPDVEKAVWNAIHKCEDLGASWEEVSM 288
Query: 308 PENGTAT----LKALSSVMLSL-----QRYEFKTIYEEW----VKSAKPRLGYNVFERVL 354
P A + A+S +L RY ++ E W K+ G V R+L
Sbjct: 289 PHIKYALASYYIIAMSEASSNLARFDGTRYGYRASGENWHAMVSKTRAEGFGTEVKRRIL 348
Query: 355 EAINTTQDNIKILY-----KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAE 409
Y KVR ++ + L +L+ PT+ +P K+ K
Sbjct: 349 LGTYALSAGYHDKYYLKALKVRTLVKQDFDKALSKVDVLMAPTMPNPAFKIGEK------ 402
Query: 410 FHDR-TLVLSSIGS----MSGCCQVAIPIGKYNEHPISISFI 446
D TL LS + + ++G +++P G + PI + +
Sbjct: 403 IEDPLTLYLSDVNTCPINLAGVPSLSVPCGFTDGLPIGLQIM 444
>gi|237798727|ref|ZP_04587188.1| hypothetical protein POR16_07822 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|237806160|ref|ZP_04592864.1| hypothetical protein POR16_36874 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331021580|gb|EGI01637.1| hypothetical protein POR16_07822 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331027273|gb|EGI07328.1| hypothetical protein POR16_36874 [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 457
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/154 (47%), Positives = 97/154 (62%), Gaps = 3/154 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
P G+ A KD+FDV G VT G+ + + A A V LL ++G +GKT L EF
Sbjct: 72 PFDGVPIAWKDLFDVAGSVTTAGAA-VRNNLSPALLDAPSVGLLARSGMVSLGKTNLSEF 130
Query: 132 AFGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A+ G N H+GTP+NP S IPGGSSSGSAVAVAA +V A+GTDT G +RVPA+F
Sbjct: 131 AYSGLGLNPHFGTPINPLSDSTPRIPGGSSSGSAVAVAAGIVPIAMGTDTAGSIRVPAAF 190
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
G++G+R + S GV P + +LD++G L R+
Sbjct: 191 NGLVGFRSTSRRYSRDGVFPLALTLDSIGPLTRS 224
>gi|410697813|gb|AFV76881.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Thermus oshimai JL-2]
Length = 434
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 174/395 (44%), Gaps = 41/395 (10%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGS----PDWKRDHHEAERTAVVVTLLLKNGATCIGK 125
R PL GL +KD+F V+G T G+ P + ER L + GA K
Sbjct: 62 RGPLHGLPLTVKDLFPVRGMPTRAGTRAPLPPLPEEARAVER-------LREAGALLFAK 114
Query: 126 TVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
T + E A GITGEN G N P+ GGSS GSAVAVA + +LG+DT G +R+
Sbjct: 115 TNMHEIALGITGENPWTGPVRNALDPTRQAGGSSGGSAVAVALGIGLASLGSDTGGSIRI 174
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRA 245
PA+F G++G++PS+G VS+ G LP S+S D G +A+ R H L +
Sbjct: 175 PAAFNGVVGFKPSYGRVSLEGALPLSRSTDHAGPIAKTV----RDAHFLTE--------- 221
Query: 246 RRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQS 305
I A + L P+ T V +E G + V + + L GLRA+
Sbjct: 222 ---ILAGEAIPLEG-PQNPTFGVPLDFLEGRLG------VGVRKAFQRLLEDLPGLRAEV 271
Query: 306 TSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIK 365
+ L++ V L RYE I+E+ +K V + E + T+ + +
Sbjct: 272 ---REVSLPLRSAYEVYTRLTRYEAARIHEKALKEHPEGFSPQVRLALEEGLKLTEKDYR 328
Query: 366 ILYKVRNEMRAALQRLLKDDKILVIPT--VSDPPLKLNTKKTYSAEFHDRT--LVLSSIG 421
R +R L + L+ L++PT + PPL + S R + L+
Sbjct: 329 DAVAEREALRLELAKALRGVDALLLPTQPLPAPPLGTEVVELESGPKSHREAFITLTLPF 388
Query: 422 SMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
S+ G + + + P+ + + +G D +L
Sbjct: 389 SLLGVPTLTLTFARVEGMPVGVQVVGPYGEDGRVL 423
>gi|418062273|ref|ZP_12700072.1| allophanate hydrolase [Methylobacterium extorquens DSM 13060]
gi|373564185|gb|EHP90315.1| allophanate hydrolase [Methylobacterium extorquens DSM 13060]
Length = 611
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/215 (42%), Positives = 115/215 (53%), Gaps = 26/215 (12%)
Query: 29 VVLAETLRRRRNPKLNGRVDFGAFLERFE----------LIPFPQPPPPAARQPLAGLKF 78
VVLAE RR + D G FL R L PF A +PL G+ F
Sbjct: 24 VVLAEIDRR-----IAAADDPGIFLARVPAAEMQAAARALGPFDP-----ANKPLWGVPF 73
Query: 79 AIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGE 138
A+KD D+ G T PD+ + + TA V LL GA +GKT LD+FA G+ G
Sbjct: 74 AVKDDVDIAGLPTTAACPDFA---YTPQATAPAVERLLAAGAILVGKTNLDQFATGLVGV 130
Query: 139 NKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPS 198
Y P N P+ +PGGSSSGSAVAVA LV FALGTDT G RVPA I+G +PS
Sbjct: 131 RTPYPVPKNAIDPAIVPGGSSSGSAVAVARGLVTFALGTDTAGSGRVPAGLNNIVGLKPS 190
Query: 199 HGTVSMIGVLPNSQSLDTVGLLA---RNASILHRV 230
G+VS GV+P ++LDT+ + A A ++ RV
Sbjct: 191 LGSVSGRGVVPACRTLDTLSVFAGTVTEADVVFRV 225
>gi|427427139|ref|ZP_18917184.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Caenispirillum
salinarum AK4]
gi|425883840|gb|EKV32515.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Caenispirillum
salinarum AK4]
Length = 455
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 182/419 (43%), Gaps = 52/419 (12%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL GL ++KD+FDVKG VT GS + D A A V L GA +G+T + EF
Sbjct: 70 PLLGLPVSVKDLFDVKGQVTAAGSV-VRADDPPATADAPAVRRLRAAGAVVVGRTNMTEF 128
Query: 132 AFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
AF G N H+GTP NP + IPGGSS+G+AV+V + ALGTDT G VR+PA
Sbjct: 129 AFSGVGLNPHHGTPRNPWDRATGRIPGGSSAGAAVSVTDGMAAAALGTDTGGSVRIPAGL 188
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAV--EPRRARR 247
CG+ G++P+ V G P S ++D+VG LA + + VL V EP +
Sbjct: 189 CGLAGFKPTQARVPRDGAFPLSYAMDSVGPLAPTVACCALLDAVLAGAEPVVPEPMPIKD 248
Query: 248 LIFA-------DDIFQLSKVPKLKT-IHVISKAIESLSGYQNPEHMNVGQYIASNVPSLK 299
L A DD+ + S + +T +H +S A + G + ++ Y+A
Sbjct: 249 LRVAVPQGLVLDDMDE-SVAERFETALHTLSAAGVHVDGLGVADLLDT-TYVAR------ 300
Query: 300 GLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINT 359
+AL + E +I+ + R V R+ A
Sbjct: 301 ----------------QALEVTV------EAWSIHRHRAATDAARFDQRVLARMKAADGL 338
Query: 360 TQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEF---HDRTLV 416
+ ++ L R + + L D L+ PT+ P L + + E H L+
Sbjct: 339 SAADVIDLQLWRKDFQRRWNVLAADYDALLWPTL--PTLAPTIAQVDADEESYNHWNRLM 396
Query: 417 LSS---IGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNI 472
L + + + GC IPI + E + + + G D L L L +L E ++
Sbjct: 397 LRNTRLVNVLDGCAAT-IPIHRPREAAVGLQVVGPTGADTRTLRVALALEAALSEMRDV 454
>gi|328543589|ref|YP_004303698.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Polymorphum gilvum
SL003B-26A1]
gi|326413334|gb|ADZ70397.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Polymorphum gilvum
SL003B-26A1]
Length = 607
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 95/153 (62%), Gaps = 3/153 (1%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
+PL G+ FA+KD DV G T PD+ +H AE A VV L GA +GKT LD+
Sbjct: 86 KPLWGVPFAVKDNIDVAGMPTTAACPDYL--YHPAE-DATVVARLKAAGAIVVGKTNLDQ 142
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FA G+ G Y P N P+ +PGGSSSGSAVAVA +V F+LGTDT G RVPA+
Sbjct: 143 FATGLVGVRSPYPIPRNAVDPALVPGGSSSGSAVAVAQGIVTFSLGTDTAGSGRVPAALN 202
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
++G +PS G++S GV+P ++LDTV + A
Sbjct: 203 DLVGLKPSLGSLSATGVVPACRTLDTVSIFAHT 235
>gi|46133813|ref|XP_389222.1| hypothetical protein FG09046.1 [Gibberella zeae PH-1]
Length = 669
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 98/169 (57%), Gaps = 4/169 (2%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
+QPLAGL+ IKD+FD+KG T FGS W TA+ V L+ GA +GK L
Sbjct: 180 KQPLAGLRIGIKDLFDMKGVKTSFGSKAWYDMSKIKTETAIAVQKLIDAGAIIVGKNKLS 239
Query: 130 EFAFG--ITGENKHYGTPVNPQMPSH-IPGGSSSGSAVAVAA-QLVDFALGTDTIGCVRV 185
EFAF E+ Y PVNP+ + P SS GSA AVA+ +D +LG+DT G +R
Sbjct: 240 EFAFAGMFVTEHIDYLLPVNPRGDGYQSPSDSSGGSAAAVASYDWLDASLGSDTGGSIRG 299
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL 234
PAS G+ G RP+ V++ G LP S S+DT G+L R+ + R+ VL
Sbjct: 300 PASTNGVHGGRPTQDAVNLTGALPLSVSMDTAGILVRDPRMWARINKVL 348
>gi|254511785|ref|ZP_05123852.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A)
[Rhodobacteraceae bacterium KLH11]
gi|221535496|gb|EEE38484.1| glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A)
[Rhodobacteraceae bacterium KLH11]
Length = 455
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ ++KD+ D++G VT S + RD A+R A+V L G CIGK L EF
Sbjct: 73 PLDGVPISLKDLIDLEGEVTTAASALY-RDAPAAKRDAIVAQNLSAAGMICIGKVNLTEF 131
Query: 132 AFGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A+ G N H+GT +NP P PGGSSSG+AV++++ +V ++G+DT G VR+PASF
Sbjct: 132 AYSGIGLNPHFGTAINPLSPDVPRAPGGSSSGTAVSISSGIVPCSIGSDTGGSVRIPASF 191
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
G++GY+ S G +S GV S+ DT+G LAR+
Sbjct: 192 NGLVGYKSSEGRISTQGVFALSRMFDTMGPLARS 225
>gi|240140543|ref|YP_002965023.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Methylobacterium
extorquens AM1]
gi|240010520|gb|ACS41746.1| glutamyl-tRNA(Gln) amidotransferase (subunit A) [Methylobacterium
extorquens AM1]
Length = 611
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/215 (42%), Positives = 115/215 (53%), Gaps = 26/215 (12%)
Query: 29 VVLAETLRRRRNPKLNGRVDFGAFLERFE----------LIPFPQPPPPAARQPLAGLKF 78
VVLAE RR + D G FL R L PF A +PL G+ F
Sbjct: 24 VVLAEIDRR-----IAAADDPGIFLARVPAAEMQAAARALGPFDP-----ANKPLWGVPF 73
Query: 79 AIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGE 138
A+KD D+ G T PD+ + + TA V LL GA +GKT LD+FA G+ G
Sbjct: 74 AVKDNVDIAGLPTTAACPDFA---YTPQATAPAVERLLAAGAILVGKTNLDQFATGLVGV 130
Query: 139 NKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPS 198
Y P N P+ +PGGSSSGSAVAVA LV FALGTDT G RVPA I+G +PS
Sbjct: 131 RTPYPVPKNAIDPAIVPGGSSSGSAVAVARGLVTFALGTDTAGSGRVPAGLNNIVGLKPS 190
Query: 199 HGTVSMIGVLPNSQSLDTVGLLA---RNASILHRV 230
G+VS GV+P ++LDT+ + A A ++ RV
Sbjct: 191 LGSVSGRGVVPACRTLDTLSVFAGTVTEADVVFRV 225
>gi|126728353|ref|ZP_01744169.1| amidase [Sagittula stellata E-37]
gi|126711318|gb|EBA10368.1| amidase [Sagittula stellata E-37]
Length = 604
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 193/415 (46%), Gaps = 29/415 (6%)
Query: 49 FGAFLERFELIPFPQPPPPAARQ--PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAE 106
F A +R E++ PP + PL G+ FA+KD DV+G T P + +E
Sbjct: 46 FIALRDRAEVVAEAMALPPFDPEAYPLWGVPFAVKDNIDVEGLPTTAACPAFA---YEPA 102
Query: 107 RTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAV 166
A VV L GA IGKT LD+FA G+ G Y P N P +PGGSSSGSAVAV
Sbjct: 103 EDAFVVARLRAAGALVIGKTNLDQFATGLVGMRSPYAVPFNAVDPEIVPGGSSSGSAVAV 162
Query: 167 AAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASI 226
A +V FALGTDT G RVPA+ I+G++PS G +S G++P ++LDT+ + + +
Sbjct: 163 AQGIVSFALGTDTAGSGRVPAALNNIVGFKPSLGLLSATGMVPACRTLDTISIFSAGVAD 222
Query: 227 LHRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMN 286
R V +A + +R L P L T ++ AI + + + +
Sbjct: 223 GWRALQVAAGYDAAD-AYSRDL----------PAPALDTRETLTVAIPDAASAKFFD--D 269
Query: 287 VGQYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLG 346
Q A + + + T E ++ ++ S + E + + +P +
Sbjct: 270 TLQAEAFAAATARLMDMGVTVEEIDLTPFYDVAQMLYSGAWVAERKAAMEDIMAVEPDVV 329
Query: 347 YNVFERVLEAIN--TTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKK 404
+ V ++ A + T D + Y++ ++R A+Q +L+ +L++PTV T+
Sbjct: 330 HPVTRAIVSAADRLTAVDAFRGFYRL-ADLRRAVQPVLERYDMLIVPTVP----TFYTRA 384
Query: 405 TYSA---EFHDRTLVLSSIGSMSGCCQVAIPI-GKYNEHPISISFITYHGGDKFL 455
A E + R ++ ++ C +A+P + + P S++ + G D L
Sbjct: 385 DLEADPVEPNSRFGTYTNFVNLLDMCGLAVPTRPRSDGRPGSLTLLAASGRDGLL 439
>gi|385678337|ref|ZP_10052265.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Amycolatopsis sp.
ATCC 39116]
Length = 406
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 100/186 (53%), Gaps = 23/186 (12%)
Query: 48 DFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAER 107
DFGA++ERF L P G+ FA+KD DV G T G+P HH A
Sbjct: 11 DFGAYVERFPL-------------PETGIPFAVKDFLDVAGQTTRNGTPGLG--HHLAAE 55
Query: 108 TAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVA 167
A VV L G + +T + E A+ + NP P+ GGSS GSAVAVA
Sbjct: 56 DAEVVARLRAAGYVPVARTTVPELAWSVRTPGCR-----NPWAPNRDAGGSSGGSAVAVA 110
Query: 168 AQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNAS-- 225
V ALGTDT G +R+PA+ CG+ G RP+HGTV + GV P S+DTVG +AR A+
Sbjct: 111 TGDVPVALGTDTGGSIRIPAALCGVAGLRPTHGTVPVRGVTPLVPSMDTVGPIARTAADC 170
Query: 226 -ILHRV 230
+HR+
Sbjct: 171 LTVHRI 176
>gi|425469635|ref|ZP_18848554.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 9701]
gi|389880465|emb|CCI38759.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 9701]
Length = 443
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/212 (41%), Positives = 120/212 (56%), Gaps = 6/212 (2%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ FA+K++FD++G VT GS RDH A + A+ + L GA +G T +DE+
Sbjct: 67 PLAGVPFAVKNLFDIEGIVTLAGS-KINRDHPAAGQDAIAIQTLEAAGAVLVGATNMDEY 125
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+G EN HYG NP PS + GGSS GSA AVAA LV ALG+DT G VRVPA+ CG
Sbjct: 126 AYGFVTENAHYGATANPLDPSRVSGGSSGGSAAAVAANLVPLALGSDTNGSVRVPAACCG 185
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP---RRARRL 248
++G +P+ G VS G+ SLD +G + N + + + V + N P ++
Sbjct: 186 VVGLKPTFGRVSRQGLFLFVSSLDHLGFFSGNVADMAAIWRVFAKNNLKAPLNGLEGVKI 245
Query: 249 IFADDIFQLSKVPKLKTIHVISKAIESLSGYQ 280
ADD FQ P++ I ++ E L Q
Sbjct: 246 ALADDYFQQGAEPEV--IEAVTAIAERLGVSQ 275
>gi|299067850|emb|CBJ39061.1| putative Glutamyl-tRNA amidotransferase/amidase (gatA) [Ralstonia
solanacearum CMR15]
Length = 448
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 118/398 (29%), Positives = 170/398 (42%), Gaps = 47/398 (11%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAGL +IKD+FDV G VT GS A A V L GA +G+T + EFA
Sbjct: 73 LAGLPVSIKDLFDVAGQVTAAGSRALAH-QRAATSDATAVARLRAAGAVLLGRTNMSEFA 131
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
F G N HYGTP P + GGS+SG AV VA + ALGTDT G +R+PA+FC +
Sbjct: 132 FSGLGLNPHYGTPRTPADGTRAAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPAAFCAL 191
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL----LQLNAVEPRRARRL 248
G++P+ V M G +P S SLD+ G LA + V VL L +AV P RL
Sbjct: 192 TGFKPTARRVPMAGGVPLSTSLDSGGPLANSVDCCAIVDAVLSGQALDTDAV-PLAGLRL 250
Query: 249 -----IFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRA 303
A D+ + + + +A + ++ PE + +
Sbjct: 251 GLTRDYVAADLDDTVATAFARAVARLERAGAHIVRFEFPELLQL---------------- 294
Query: 304 QSTSPE-NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQD 362
PE NG L A E + + A+ + V R+ +
Sbjct: 295 ----PEINGGGGLPA----------AEAWAWHRPHLARAEAQYDRRVATRIRRGEQMSAA 340
Query: 363 NIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAE-FHDRTLVL---S 418
+ R M AA ++ L + ++PTV+ P ++ + A F LVL S
Sbjct: 341 AYLDVMAAREHMIAAARKRLGNLDAWLMPTVAVVPPEVAPLEADDARFFRTNALVLRNPS 400
Query: 419 SIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+I + GC + +PI E P+ +S D +L
Sbjct: 401 AINFLDGCA-LTLPIHAAGELPVGLSLCGLADDDARIL 437
>gi|302387682|ref|YP_003823504.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Clostridium
saccharolyticum WM1]
gi|302198310|gb|ADL05881.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium
saccharolyticum WM1]
Length = 498
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 97/166 (58%), Gaps = 8/166 (4%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGS---PDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
PLAG+ A+KD ++G T GS D+ + TA V L K GA +GKT +
Sbjct: 73 PLAGVPVAVKDNICIQGMKTTCGSKILSDFVPSY-----TASAVENLKKAGAVILGKTNM 127
Query: 129 DEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPAS 188
DEFA G T E YG NP P H+PGGSS GS AVAA +ALG+DT G +R PAS
Sbjct: 128 DEFAMGSTTETSAYGVTRNPWNPDHVPGGSSGGSCAAVAAAECFYALGSDTGGSIRQPAS 187
Query: 189 FCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL 234
FCG+ G +P++GT+S G++ SLD +G +A++ + + VL
Sbjct: 188 FCGVTGLKPTYGTISRYGLIAYGSSLDQIGPVAKDVTDCAAILEVL 233
>gi|339325668|ref|YP_004685361.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Cupriavidus necator
N-1]
gi|338165825|gb|AEI76880.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Cupriavidus necator
N-1]
Length = 454
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 127/405 (31%), Positives = 189/405 (46%), Gaps = 42/405 (10%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
PLAGL ++KD++DV G VT S ++D A A VV L GA +G+T + E
Sbjct: 68 HPLAGLPVSVKDLYDVAGEVTSAASL-VRKDAAPATADATVVARLRAAGAALVGRTNMTE 126
Query: 131 FAFGITGENKHYGTPVNPQMP---SHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
FAF G N HYGTPVNP + IPGGSSSG+AV+VA L ALG+DT G +R+PA
Sbjct: 127 FAFSGVGINPHYGTPVNPAGTDGVARIPGGSSSGAAVSVALGLAVAALGSDTGGSIRIPA 186
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPR---- 243
+ CGI G++P+ V + G P S +LDT +AR S + V+ +AV PR
Sbjct: 187 ALCGITGFKPTTRRVPLTGAFPLSYTLDTACAMARTVSDCIAMDSVIAD-SAVIPRVTNP 245
Query: 244 RARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRA 303
A RL + P V+++A + G + + + + L GL A
Sbjct: 246 AATRLAIPRQVLLDDLDP------VVARAFDRALGRLSAAGVQLEHVDLPELGELAGLNA 299
Query: 304 QSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDN 363
Q G ++ +A ++ R+ E + PR V R+ N + +
Sbjct: 300 Q-----GGFSSAEA-----FAIHRHLLAGRRELY----DPR----VASRIDRGANISAAD 341
Query: 364 IKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVL----SS 419
L + R + A +Q L +V PTV ++ +T A+F +L S+
Sbjct: 342 YIDLGRARLDWIARMQARLARFDAVVCPTVPMVAPEIAPLRTDDAQFFRVNALLLRNTSA 401
Query: 420 IGSMSGCCQVAIPIGKYNEHPISISFITYHGG--DKFLLDTVLDL 462
+ G C +++P +E P+ + + HG D LL T L L
Sbjct: 402 FNFLDG-CSISMPCHAPDELPVGL--MLSHGPMRDADLLGTALAL 443
>gi|59801089|ref|YP_207801.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Neisseria
gonorrhoeae FA 1090]
gi|75432518|sp|Q5F8U8.1|GATA_NEIG1 RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|59717984|gb|AAW89389.1| putative Glu-tRNA(Gln) amidotransferase subunit [Neisseria
gonorrhoeae FA 1090]
Length = 481
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 98/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ TA VV LL G +G+T +DEFA G T EN YG NP P H+PGG
Sbjct: 92 -MLDNFIFPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNPEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQA 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>gi|422299795|ref|ZP_16387346.1| amidase [Pseudomonas avellanae BPIC 631]
gi|407988199|gb|EKG30806.1| amidase [Pseudomonas avellanae BPIC 631]
Length = 457
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/154 (47%), Positives = 97/154 (62%), Gaps = 3/154 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
P G+ A KD+FDV G VT G+ + + A A V LL + G +GKT L EF
Sbjct: 72 PFDGVPVAWKDLFDVAGCVTTAGA-TVRNNLSPALLDAPSVGLLARAGMVSLGKTNLSEF 130
Query: 132 AFGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A+ G N H+GTP+NP+ S IPGGSSSGSAVAVAA +V A+GTDT G +R+PA+F
Sbjct: 131 AYSGLGLNPHFGTPINPKSDSSPRIPGGSSSGSAVAVAAGIVPIAMGTDTAGSIRIPAAF 190
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
G++G+R + S GV P + +LD+VG L R+
Sbjct: 191 NGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRS 224
>gi|304321845|ref|YP_003855488.1| amidase [Parvularcula bermudensis HTCC2503]
gi|303300747|gb|ADM10346.1| amidase [Parvularcula bermudensis HTCC2503]
Length = 517
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/193 (46%), Positives = 110/193 (56%), Gaps = 1/193 (0%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ +A+KD+F V G T G+ + EA+ + L GA IG T++DE+
Sbjct: 133 PLAGVPYAVKDLFGVAGEPTTAGAQSRETAPPEAD-DCEAIRRLGDAGAILIGSTMMDEY 191
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+G N HYGT NP + GGSS GSA AVAA LV FALG+DT G VRVPAS CG
Sbjct: 192 AYGFVTVNSHYGTTKNPHALDRLAGGSSGGSAAAVAAGLVPFALGSDTNGSVRVPASLCG 251
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
+ G RPSHG + GV P SLDTVG AR+A+ L V VL V RA R+ +
Sbjct: 252 VFGLRPSHGDIPTEGVFPFVPSLDTVGAFARSAADLALVHAVLRDRAFVGSERALRIGWL 311
Query: 252 DDIFQLSKVPKLK 264
D F P L+
Sbjct: 312 DGYFTAPLDPSLR 324
>gi|218531927|ref|YP_002422743.1| allophanate hydrolase [Methylobacterium extorquens CM4]
gi|218524230|gb|ACK84815.1| allophanate hydrolase [Methylobacterium extorquens CM4]
Length = 611
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 117/223 (52%), Gaps = 23/223 (10%)
Query: 30 VLAETLRRRRNPKLNGRVDFGAFLERFE----------LIPFPQPPPPAARQPLAGLKFA 79
VLAE RR + D G FL R L PF A +PL G+ FA
Sbjct: 25 VLAEIDRR-----IAAADDPGIFLARVPAAEMQAAARALGPFDP-----ANKPLWGVPFA 74
Query: 80 IKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGEN 139
+KD DV G T PD+ + + TA+ V LL GA +GKT LD+FA G+ G
Sbjct: 75 VKDNVDVAGLPTTAACPDFA---YTPQATALAVERLLAAGAILVGKTNLDQFATGLVGVR 131
Query: 140 KHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSH 199
Y P N P+ +PGGSSSGSAVAVA LV FALGTDT G RVPA I+G +PS
Sbjct: 132 TPYPVPKNAIDPAIVPGGSSSGSAVAVARGLVTFALGTDTAGSGRVPAGLNNIVGLKPSL 191
Query: 200 GTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
G+VS GV+P ++LDT+ + A + V ++ + +P
Sbjct: 192 GSVSGRGVVPACRTLDTLSVFAGTVTEADTVFRIMAGYDPQDP 234
>gi|422651429|ref|ZP_16714224.1| hypothetical protein PSYAC_07615 [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|330964507|gb|EGH64767.1| hypothetical protein PSYAC_07615 [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 457
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/154 (47%), Positives = 97/154 (62%), Gaps = 3/154 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
P G+ A KD+FDV G VT G+ + + A A V LL + G +GKT L EF
Sbjct: 72 PFDGVPVAWKDLFDVAGCVTTAGA-TVRNNLSPALLDAPSVGLLARAGMVSLGKTNLSEF 130
Query: 132 AFGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A+ G N H+GTP+NP+ S IPGGSSSGSAVAVAA +V A+GTDT G +R+PA+F
Sbjct: 131 AYSGLGLNPHFGTPINPKSDSSPRIPGGSSSGSAVAVAAGIVPIAMGTDTAGSIRIPAAF 190
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
G++G+R + S GV P + +LD+VG L R+
Sbjct: 191 NGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRS 224
>gi|121999140|ref|YP_001003927.1| allophanate hydrolase [Halorhodospira halophila SL1]
gi|121590545|gb|ABM63125.1| Amidase [Halorhodospira halophila SL1]
Length = 596
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 100/173 (57%), Gaps = 6/173 (3%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
A PL G+ FAIKD D+ G T G PD+ + E +A VV L+ GA +GKT L
Sbjct: 61 AELPLYGVPFAIKDNIDLAGVPTTAGCPDYA---YTPETSAFVVQRLIDAGAVPVGKTNL 117
Query: 129 DEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPAS 188
D+FA G+ G YG N +I GGSSSGSA+A A V FALGTDT G RVPA+
Sbjct: 118 DQFATGLVGTRSPYGACPNAFHRDYIAGGSSSGSALATALGQVPFALGTDTAGSGRVPAA 177
Query: 189 FCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVE 241
F ++G +P+ G +S GV+P +SLDTV + A AS GH+L A +
Sbjct: 178 FNNLIGLKPTCGRLSTRGVVPACRSLDTVSIFAGTAS---DAGHILAAAGAYD 227
>gi|239820716|ref|YP_002947901.1| Amidase [Variovorax paradoxus S110]
gi|239805569|gb|ACS22635.1| Amidase [Variovorax paradoxus S110]
Length = 458
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 99/155 (63%), Gaps = 5/155 (3%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R PL G+ A+KD+ +++G T GSP + A++ A +V + G +GKT +
Sbjct: 75 RGPLHGIPLALKDLVNIQGKPTTAGSPLLSAN--IAQQDAAIVRRIADAGGVIVGKTHMV 132
Query: 130 EFAFGITGENKHYGTPVNPQMPSH---IPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
+FA G G N H GTP NP + + GGSSSGSAVAVAA LV +A+G+DT G VRVP
Sbjct: 133 QFALGAWGTNTHMGTPRNPAGRATDMLVAGGSSSGSAVAVAAHLVPWAIGSDTGGSVRVP 192
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLA 221
A+FCGI+G++P+ + GV S+SLD+VGLLA
Sbjct: 193 AAFCGIVGFKPTIDALPREGVYALSESLDSVGLLA 227
>gi|330808987|ref|YP_004353449.1| amidase [Pseudomonas brassicacearum subsp. brassicacearum NFM421]
gi|327377095|gb|AEA68445.1| putative amidase [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 458
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 96/154 (62%), Gaps = 5/154 (3%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A KD+FDV G T G+ +RD A A VV LL K G +GKT L EFA
Sbjct: 74 LDGVPVAWKDMFDVAGSPTTAGAA-VRRDITPALLDANVVGLLAKAGMVSVGKTNLSEFA 132
Query: 133 FGITGENKHYGTPVNP---QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
+ G N H+GTP NP P IPGGSSSGSAVAVAA +V A+GTDT G +R+PA+F
Sbjct: 133 YSGLGLNPHFGTPHNPVGLDQP-RIPGGSSSGSAVAVAAGIVPIAMGTDTAGSIRIPAAF 191
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
G++G+R S S GV P + +LD+VG L R+
Sbjct: 192 NGLVGFRSSCRRYSREGVFPLAHTLDSVGPLTRS 225
>gi|389877134|ref|YP_006370699.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Tistrella mobilis
KA081020-065]
gi|388527918|gb|AFK53115.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Tistrella mobilis
KA081020-065]
Length = 452
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 167/400 (41%), Gaps = 47/400 (11%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAGL +IKD+FDV G T GS K +V L GA GKT + EF
Sbjct: 71 PLAGLPISIKDLFDVAGETTMAGSVVMKDAAPAMADAPIVARLR-AAGAVITGKTNMTEF 129
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
AF G N HYGTP N IPGGSS+G+ ++V + A+GTDT G +R+PA+F G
Sbjct: 130 AFSGVGLNPHYGTPGNVFDADRIPGGSSAGAGISVVKGMAAAAIGTDTGGSIRIPANFAG 189
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLL--QLNAVEPRRARRLI 249
I+G++PS V + G LP S + D++G LA + V VL + PR L
Sbjct: 190 IVGFKPSQARVPLEGALPLSSTQDSIGPLAPTVACCALVDAVLAGEAPRILRPRAPETLT 249
Query: 250 FA----------DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLK 299
FA DD + LK + A L + PE V Q A+
Sbjct: 250 FAVARGLPMDGVDDQVANAYDAALKRLR---DAGVRLIELELPEIAEVPQLNAAG----- 301
Query: 300 GLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINT 359
G A + + R +T E + PR V R+
Sbjct: 302 GFSAAES----------------WAWHRAIIQTGAERY----DPR----VLSRIRRGEAM 337
Query: 360 TQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVL-- 417
+ L K R M AA L+ L++PTV P ++ + LVL
Sbjct: 338 GAADYIDLIKRRRRMVAAADLALRPFDALLMPTVPIVPPRIADLADDADYTRLNLLVLRN 397
Query: 418 SSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
+ G++ C V +PI + P + + +G D LLD
Sbjct: 398 PTFGNVLDLCGVTLPIAEPGALPAGLMLLGRNGADHDLLD 437
>gi|118470455|ref|YP_887305.1| amidohydrolase [Mycobacterium smegmatis str. MC2 155]
gi|118171742|gb|ABK72638.1| amidohydrolase, AtzE family protein [Mycobacterium smegmatis str.
MC2 155]
Length = 447
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 178/395 (45%), Gaps = 41/395 (10%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGS---PDWKRDHHEAERTAVVVTLLLKNGATCIGKT 126
R L G+ A+KD+ DV G+VT GS P A A V L GA +G+
Sbjct: 79 RGVLHGIPVAVKDLVDVAGHVTTRGSVVHPG------PATADAECVRRLRTAGAVIVGRN 132
Query: 127 VLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
VL EFAFG TG+ +G NP PS I GGSS GSAVA AA +V A+GTDT G VRVP
Sbjct: 133 VLHEFAFGATGDRSAHGASRNPWDPSRISGGSSGGSAVATAAGMVPLAVGTDTAGSVRVP 192
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRAR 246
A+ CG++G++P++G + GV P + SLD VG+ AR A+ + + +P RA+
Sbjct: 193 AALCGVVGFKPAYGAIPAQGVWPLAASLDHVGVFARTATGAAAAYTAMAG-RSPDPVRAQ 251
Query: 247 RLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQST 306
R+ + D P +I+ E+L Q VG A+
Sbjct: 252 RVAWLDPACLGPCDPA-----IIAALSETLRAAQITVDGTVGLPFAAG------------ 294
Query: 307 SPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKI 366
+ALS + S E+ E+ P V R+L +T
Sbjct: 295 ------EVFEALSVLQSSEAYTEYSAETEQRASDIDP----EVLGRLLRGRDTPAWQYVR 344
Query: 367 LYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTK----KTYSAEFHDRTLVLSSIGS 422
+ R+ +RAA LL +L +P +++ + ++ E L L+ +
Sbjct: 345 ACRQRDRLRAAADTLLTRFDVLAMPAAPTVATEIDQRAHQIDGHAVEVRSALLSLTCPWN 404
Query: 423 MSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
++G +++P G + P+ + I+ G + L D
Sbjct: 405 LTGHPALSVPAGVVSGLPVGLQLISAPGNEGMLFD 439
>gi|399987321|ref|YP_006567670.1| amidase [Mycobacterium smegmatis str. MC2 155]
gi|399231882|gb|AFP39375.1| Amidase [Mycobacterium smegmatis str. MC2 155]
Length = 438
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 178/395 (45%), Gaps = 41/395 (10%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGS---PDWKRDHHEAERTAVVVTLLLKNGATCIGKT 126
R L G+ A+KD+ DV G+VT GS P A A V L GA +G+
Sbjct: 70 RGVLHGIPVAVKDLVDVAGHVTTRGSVVHPG------PATADAECVRRLRTAGAVIVGRN 123
Query: 127 VLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
VL EFAFG TG+ +G NP PS I GGSS GSAVA AA +V A+GTDT G VRVP
Sbjct: 124 VLHEFAFGATGDRSAHGASRNPWDPSRISGGSSGGSAVATAAGMVPLAVGTDTAGSVRVP 183
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRAR 246
A+ CG++G++P++G + GV P + SLD VG+ AR A+ + + +P RA+
Sbjct: 184 AALCGVVGFKPAYGAIPAQGVWPLAASLDHVGVFARTATGAAAAYTAMAG-RSPDPVRAQ 242
Query: 247 RLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQST 306
R+ + D P +I+ E+L Q VG A+
Sbjct: 243 RVAWLDPACLGPCDPA-----IIAALSETLRAAQITVDGTVGLPFAAG------------ 285
Query: 307 SPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKI 366
+ALS + S E+ E+ P V R+L +T
Sbjct: 286 ------EVFEALSVLQSSEAYTEYSAETEQRASDIDP----EVLGRLLRGRDTPAWQYVR 335
Query: 367 LYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTK----KTYSAEFHDRTLVLSSIGS 422
+ R+ +RAA LL +L +P +++ + ++ E L L+ +
Sbjct: 336 ACRQRDRLRAAADTLLTRFDVLAMPAAPTVATEIDQRAHQIDGHAVEVRSALLSLTCPWN 395
Query: 423 MSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
++G +++P G + P+ + I+ G + L D
Sbjct: 396 LTGHPALSVPAGVVSGLPVGLQLISAPGNEGMLFD 430
>gi|325283276|ref|YP_004255817.1| Amidase [Deinococcus proteolyticus MRP]
gi|324315085|gb|ADY26200.1| Amidase [Deinococcus proteolyticus MRP]
Length = 388
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 177/401 (44%), Gaps = 52/401 (12%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAGL F++KD+F V G+ + R + +VT LL+ GA+ GKT L E
Sbjct: 28 PLAGLTFSVKDLFGVAGWPLSAST----RALLPEVAPSPLVTHLLQLGASAAGKTHLHEI 83
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A GI G N GT +P +P H+ GGSSSG+AV A + VDFALGTDT G +R+PA++CG
Sbjct: 84 AMGILGANAFGGT-EHPFLPGHVTGGSSSGAAVTAALEQVDFALGTDTGGSIRIPAAWCG 142
Query: 192 ILGYRPS--HGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
+ GY+P+ H GVLP S + D G LAR + RV H L V P+ L
Sbjct: 143 LYGYKPTKDHPAWPTAGVLPLSPTCDHAGPLAREFGTIMRV-HEALSGETVPPQDWAGL- 200
Query: 250 FADDIFQLSKVPKLKTIH----VISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQS 305
++ H + + A ++LSG +A + L +
Sbjct: 201 ------------RVGVWHPQGWLGADAQQALSG------------MAQRLEQLGAVLQPV 236
Query: 306 TSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIK 365
T P+ L A S ++ +E ++ + A P + E++ ++
Sbjct: 237 TLPD----MLDAYSPIV----GHEAAQVHAAALAQADPGFSPEILEKLRAGQALGPAEMQ 288
Query: 366 ILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTY----SAEFHDRTLVLSSIG 421
Y R E R L + +L+ P V P ++ ++ A L L++
Sbjct: 289 AAYARREEYRTLLAGVFSSCDLLLAPAVPCCPPRIGVEEVALAGGPANIRPAVLRLTAPF 348
Query: 422 SMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDL 462
SM G VA+P + + + G D LL V +L
Sbjct: 349 SMLGSPAVAVPSAVDW---LGVQLVAPWGEDARLLGLVREL 386
>gi|296130614|ref|YP_003637864.1| amidase [Cellulomonas flavigena DSM 20109]
gi|296022429|gb|ADG75665.1| Amidase [Cellulomonas flavigena DSM 20109]
Length = 579
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 155/362 (42%), Gaps = 32/362 (8%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLA A+KD++ V G G G+P W D A V LL GA G T DE
Sbjct: 142 PLARRTVAVKDLYAVAGQRVGAGNPTWLADAPVESEHADAVARLLAAGADVRGVTRTDEL 201
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+ + G N H GTP NP+ P +PGGSSSGSA AVA D LGTDT G VRVPAS+ G
Sbjct: 202 AYSLAGTNAHSGTPPNPRAPGRVPGGSSSGSAAAVALGQADVGLGTDTGGSVRVPASYQG 261
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
+ G R +HG VS G++P + + D VG L R+A +L VG VLL
Sbjct: 262 LYGIRTTHGAVSTRGLVPLAPTFDAVGWLTRDADLLVAVGDVLLP--------------- 306
Query: 252 DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENG 311
+ P+ + V + G + V T +G
Sbjct: 307 ---PETDTAPRSPRLRVSPALLAHAQGDVAARVAVFAADAGATV----------TDTWDG 353
Query: 312 TATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVR 371
L A + V Q +E + WV + LG +V R A + R
Sbjct: 354 V-DLAAWAEVFRVHQAWEAWREHGAWVSAHPGALGPDVAGRFAAASRIDDADGAAAAVRR 412
Query: 372 NEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAI 431
++R + L+ DD +LV+P P + + + TL L+ + + G V +
Sbjct: 413 EQLRERVLDLVGDD-VLVLPAAPSVPPRPDPVGLEAVRAA--TLRLTCVAGIGGLPAVVL 469
Query: 432 PI 433
P+
Sbjct: 470 PM 471
>gi|441208125|ref|ZP_20973851.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Mycobacterium smegmatis MKD8]
gi|440627599|gb|ELQ89407.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Mycobacterium smegmatis MKD8]
Length = 447
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 178/395 (45%), Gaps = 41/395 (10%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGS---PDWKRDHHEAERTAVVVTLLLKNGATCIGKT 126
R L G+ A+KD+ DV G+VT GS P A A V L GA +G+
Sbjct: 79 RGVLHGIPVAVKDLVDVAGHVTTRGSVVHPG------PATADAECVRRLRTAGAVIVGRN 132
Query: 127 VLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
VL EFAFG TG+ +G NP PS I GGSS GSAVA AA +V A+GTDT G VRVP
Sbjct: 133 VLHEFAFGATGDRSAHGASRNPWDPSRISGGSSGGSAVATAAGMVPLAVGTDTAGSVRVP 192
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRAR 246
A+ CG++G++P++G + GV P + SLD VG+ AR A+ + + +P RA+
Sbjct: 193 AALCGVVGFKPAYGAIPAQGVWPLAASLDHVGVFARTATGAAAAYTAMAG-RSPDPVRAQ 251
Query: 247 RLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQST 306
R+ + D P +I+ E+L Q VG A+
Sbjct: 252 RVAWLDPACLGPCDPA-----IIAALSETLRAAQITVDGTVGLPFAAG------------ 294
Query: 307 SPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKI 366
+ALS + S E+ E+ P V R+L +T
Sbjct: 295 ------EVFEALSVLQSSEAYTEYSAETEQRASDIDP----EVLGRLLRGRDTPAWQYVR 344
Query: 367 LYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTK----KTYSAEFHDRTLVLSSIGS 422
+ R+ +RAA LL +L +P +++ + ++ E L L+ +
Sbjct: 345 ACRQRDRLRAAADTLLTRFDVLAMPAAPTVATEIDQRAHQIDGHAVEVRSALLSLTCPWN 404
Query: 423 MSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
++G +++P G + P+ + I+ G + L D
Sbjct: 405 LTGHPALSVPAGVVSGLPVGLQLISAPGNEGMLFD 439
>gi|402757984|ref|ZP_10860240.1| Glu-tRNA amidotransferase [Acinetobacter sp. NCTC 7422]
Length = 370
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 176/388 (45%), Gaps = 50/388 (12%)
Query: 75 GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFG 134
LK +KD D++G T GS + A R A VV +L KT L E AFG
Sbjct: 14 ALKVMVKDSIDIQGMQTMAGSKALMQSQ-AATRNAAVVDRILAADCQITAKTNLHELAFG 72
Query: 135 ITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILG 194
ITG N +GT VNP+ P IPGGSSSGSA AVAA L DF LGTDT G +R+PA+ CG+ G
Sbjct: 73 ITGINHVFGTAVNPKYPELIPGGSSSGSAAAVAAGLADFTLGTDTGGSIRMPAACCGVYG 132
Query: 195 YRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDI 254
+P+ G VS GV P + SLD VG A + ++ + ++P +
Sbjct: 133 LKPTFGRVSRAGVHPATSSLDCVGPFANSIDMIETAMQI------IDPTFHQST------ 180
Query: 255 FQLSKVPKLKTIHVI--SKAIESLSGY-----QNPEHMNVGQYIASNVPSLKGLRAQSTS 307
+L++ PKL + V S E + Y +P H+ V +
Sbjct: 181 -ELTQAPKLAWLDVQADSTVAECIQHYLAQADLHPIHVTVKSF----------------- 222
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
A + + YE Y E ++ LG +V R+L+A TT ++
Sbjct: 223 --------DAAFDAGMQIINYENWQAYGELTQTG--LLGTDVNARLLKAAATTLAQVEQA 272
Query: 368 YKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCC 427
+V+ A + LL L++PT+ P K+ + A + LV ++SG
Sbjct: 273 EQVKASFTAEIDALLDQYDALILPTLPQLPPKVAEAENTVAFLNLTGLVRPF--NLSGHP 330
Query: 428 QVAIPIGKYNEHPISISFITYHGGDKFL 455
++IP+ P+ + + H D++L
Sbjct: 331 AISIPLQTNEGLPVGLQIVAKHNADEYL 358
>gi|429215382|ref|ZP_19206544.1| amidase [Pseudomonas sp. M1]
gi|428154609|gb|EKX01160.1| amidase [Pseudomonas sp. M1]
Length = 385
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 120/344 (34%), Positives = 160/344 (46%), Gaps = 53/344 (15%)
Query: 74 AGLKFAIKDVFDVKGYVTGFGS---PDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
AG + A+KD D+ G+ T GS D H AE VV +L G +GKT L E
Sbjct: 17 AGKRVAVKDTIDIAGHPTRCGSRALADSAPVQHHAE----VVQRVLDAGWRIVGKTNLHE 72
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
AFG+TG N GTP+NPQ P +PGGSSSGSA AV A L D ALGTDT G VRVPA+ C
Sbjct: 73 LAFGVTGINDWSGTPLNPQAPERVPGGSSSGSAAAVGAGLADIALGTDTGGSVRVPAACC 132
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLL-QLNAVE-PRRARRL 248
G+ G +PS G VS +GV P SLD VG A N + L VL AV P R+
Sbjct: 133 GVAGLKPSFGRVSHVGVHPEHSSLDCVGPFAANMADLVAAMQVLCPGFGAVNLPGANARV 192
Query: 249 IFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSP 308
F + VP I A +G++ + +G++ A+
Sbjct: 193 AFLE-------VPADPHIQACLGAAADRAGWRRAS-LYLGEFEAAF-------------- 230
Query: 309 ENGTATLKALSSVMLSLQRYEFKTIYEEWVK----SAKPRLGYNVFERVLEAINTTQDNI 364
E G + +E W + K LG +V +R+L A T+ +
Sbjct: 231 EAGLVVIN-----------------HENWAALGQFTGKGLLGADVEQRLLAAGRTSAAQL 273
Query: 365 KILYKVRNEMRAALQRLLKDDKILVIPTVSD-PPLKLNTKKTYS 407
VR A+ L D +IL++PT++ PPL + + S
Sbjct: 274 AEAEGVRASFTRAIDSALDDYEILLLPTLASLPPLLSDARSGKS 317
>gi|163853123|ref|YP_001641166.1| allophanate hydrolase [Methylobacterium extorquens PA1]
gi|163664728|gb|ABY32095.1| allophanate hydrolase [Methylobacterium extorquens PA1]
Length = 611
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 146/540 (27%), Positives = 220/540 (40%), Gaps = 115/540 (21%)
Query: 30 VLAETLRRRRNPKLNGRVDFGAFLERFE----------LIPFPQPPPPAARQPLAGLKFA 79
VLAE RR + D G FL R L PF A +PL G+ FA
Sbjct: 25 VLAEIDRR-----IAAADDPGIFLARVPAAEMQAAARALGPFDP-----ANKPLWGVPFA 74
Query: 80 IKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGEN 139
+KD DV G T PD+ + + TA V LL GA +GKT LD+FA G+ G
Sbjct: 75 VKDNVDVAGLPTTAACPDFA---YTPQATAPAVERLLAAGAILVGKTNLDQFATGLVGVR 131
Query: 140 KHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSH 199
Y P N P+ +PGGSSSGSAVAVA LV FALGTDT G RVPA I+G +PS
Sbjct: 132 TPYPVPKNAIDPAIVPGGSSSGSAVAVARGLVTFALGTDTAGSGRVPAGLNNIVGLKPSL 191
Query: 200 GTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLN---------AVEPR------- 243
G+VS GV+P ++LDT+ + A + V ++ + V PR
Sbjct: 192 GSVSGRGVVPACRTLDTLSVFAGTVTEADAVFRIMAGYDPQDPYSRALPVPPRPGALPPG 251
Query: 244 ------RARRLIFADDIFQLSKVP-KLKTIHVIS----KAIESLSGYQNPEHMNVGQYIA 292
A LIFA D S L +H ++ A++ + + G ++A
Sbjct: 252 LRVGVPDAAGLIFAGDALSASAFDGALADLHTVTGAAATAVDLAPFFAVAGLLYAGPWVA 311
Query: 293 SNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFER 352
+++G + PE T +A+ S
Sbjct: 312 ERYQAIRGFMEE--RPEALHPTTRAIISAATG---------------------------- 341
Query: 353 VLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDP---------PLKLNTK 403
++ D LY++ E+R A + + + +LV+PT P P+ N++
Sbjct: 342 -----HSAADAFAGLYRL-AELRRATEPVWRGIDVLVVPTYPRPRRVADLAADPVGPNSE 395
Query: 404 KTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEH--PISISFITYHGGDKFLLDTVLD 461
F + + C +A+P G++ P ++ I G D + +
Sbjct: 396 LGTYTNFVN----------LLDLCALAVP-GRFRADGLPSGVTLIAPRGADGLIAELGAR 444
Query: 462 LYDSLQEQVNIASNLVPLPDTNGSIDASELLKEKGNAAFKGKQWNKA-VNYYSEAIKLNG 520
L+ + + ++ VP+P AS + +G +G + A V + + LNG
Sbjct: 445 LHAAAGG--TLGASGVPIPAEA----ASPGKRAQGRDRAQGDEIEIAVVGAHLSGLPLNG 498
>gi|260221605|emb|CBA30337.1| hypothetical protein Csp_C23040 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 623
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 95/159 (59%), Gaps = 3/159 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ FAIKD D+ G T G PD+ + E++A VV LL GA IGKT LD+F
Sbjct: 89 PLWGIPFAIKDNIDLAGVPTTAGCPDYA---YIPEQSATVVQRLLDAGAIAIGKTNLDQF 145
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G+ G YG +N P + GGSS+GSAV+VA V F+LGTDT G RVPA F
Sbjct: 146 ATGLNGSRSPYGACLNSHNPGFVSGGSSAGSAVSVALGQVSFSLGTDTAGSGRVPAGFNH 205
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRV 230
++G +PS G +S GV+P ++LD V + A A +V
Sbjct: 206 LVGLKPSLGLLSTHGVVPACRTLDVVSIFALTADDAQQV 244
>gi|325268114|ref|ZP_08134760.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Kingella
denitrificans ATCC 33394]
gi|324980499|gb|EGC16165.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Kingella
denitrificans ATCC 33394]
Length = 482
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 89/152 (58%), Gaps = 2/152 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A KD+F G+ + S D+ + TA VV LL G +G+T +DEFA
Sbjct: 68 LTGVPIAYKDIFCQTGWRSACSSK--MLDNFVSPYTATVVQNLLDEGMVTLGRTNMDEFA 125
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G T E YG NP P H+PGGSS GSA VAA+L ALG+DT G +R PAS CGI
Sbjct: 126 MGSTNETSFYGATKNPWNPEHVPGGSSGGSAAVVAARLAPVALGSDTGGSIRQPASHCGI 185
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
G +P++GTVS G++ + S D G +A+ A
Sbjct: 186 TGIKPTYGTVSRFGMVAYASSFDQAGPMAQTA 217
>gi|445420878|ref|ZP_21435700.1| amidase [Acinetobacter sp. WC-743]
gi|444758445|gb|ELW82945.1| amidase [Acinetobacter sp. WC-743]
Length = 448
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 124/420 (29%), Positives = 194/420 (46%), Gaps = 63/420 (15%)
Query: 69 ARQPLA---GLKFAIKDVFDVKGYVTGFGSPDWKRDHHE-AERTAVVVTLLLKNGATCIG 124
A PL+ G+ A KD+FDV+G VT GS + R+HH A++ A V L + G +G
Sbjct: 58 AHAPLSLFDGVPIAWKDLFDVQGTVTTAGSKN--REHHAVAQQDADGVMQLTRMGMVNLG 115
Query: 125 KTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVR 184
KT L EFA+ G N H+GTP N P IPGGSSSG+A +V ++V ++GTDT G +R
Sbjct: 116 KTNLTEFAYSGLGLNPHFGTPKNVVDPRCIPGGSSSGAATSVGQKIVPISMGTDTAGSIR 175
Query: 185 VPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLA---RNASILHRVGHVLLQLN-AV 240
+PASF G++GYR S S GV P + SLD+VG ++ R+ +L ++ +Q N
Sbjct: 176 IPASFNGLVGYRSSSSRYSKKGVFPLAASLDSVGPISHSVRDCIVLDQLMLGQIQSNIPS 235
Query: 241 EPRRARRLIFAD---------------DIFQLSKVPKLKTIHVISKAIESLSGYQNPEHM 285
+P+ I+ D + Q ++ + I V+ K I + + Q +
Sbjct: 236 QPQSKNMQIYVDLDMLNHPSVQDCVKHNFLQTIEILEQAEIRVVHKRIGAFNQAQTL--I 293
Query: 286 NVGQYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRL 345
+ GQ++ G A L +L + EF +
Sbjct: 294 DSGQWL-------------------GAAEAYTLHEALLHCDQAEF--------------M 320
Query: 346 GYNVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPP--LKLNTK 403
V +R+L A +T + LY++ ++A+L+ L + +L T P L
Sbjct: 321 DQRVRKRLLSAKDTLASSQIHLYQMAQHLKASLKTELAEGFLLTPTTAHTAPELAPLEAD 380
Query: 404 KTYSAEFHDRTLVLSSIGSMSGCCQVAIPIG-KYNEHPISISFITYHGGDKFLLDTVLDL 462
+ + + TL L+ GS +++P G N P I +Y G D+ LL L +
Sbjct: 381 EALFIQTNLNTLRLTMPGSYLDMPSISLPNGTDSNGRPTGILLSSYSGNDQSLLSAALSI 440
>gi|241518431|ref|YP_002979059.1| Amidase [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240862844|gb|ACS60508.1| Amidase [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 447
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 96/152 (63%), Gaps = 2/152 (1%)
Query: 75 GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFG 134
G+ A+KD+ D+ G VT GS + +R+ A A VV+ + G IGKT L EFAF
Sbjct: 66 GVPIAVKDLLDIAGTVTTAGS-EIRRNLAPAREDAEVVSSIHGVGLISIGKTNLSEFAFS 124
Query: 135 ITGENKHYGTPVNPQMPSH-IPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGIL 193
G N H+GTP+ P +PGGSSSGSA+AV +V A+G+DT G +RVPA+F G+
Sbjct: 125 GLGINPHFGTPIPGYAPEQRVPGGSSSGSAIAVERGVVLAAIGSDTAGSIRVPAAFNGLH 184
Query: 194 GYRPSHGTVSMIGVLPNSQSLDTVGLLARNAS 225
G+RPS G M GV P + S DT+G +AR+AS
Sbjct: 185 GFRPSTGRYPMRGVHPLASSFDTLGPIARSAS 216
>gi|340362919|ref|ZP_08685279.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria macacae
ATCC 33926]
gi|339886856|gb|EGQ76472.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria macacae
ATCC 33926]
Length = 482
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 89/152 (58%), Gaps = 2/152 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A KD+F G+ + S D+ + TA VV LL G +G+T +DEFA
Sbjct: 68 LTGVPIAYKDIFCQTGWRSACSSK--MLDNFVSPYTATVVQNLLDEGMVTLGRTNMDEFA 125
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G T E YG NP P H+PGGSS GSA VAA+L ALG+DT G +R PAS CGI
Sbjct: 126 MGSTNETSFYGATKNPWNPEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGI 185
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
G +P++GTVS G++ + S D G +A+ A
Sbjct: 186 TGIKPTYGTVSRFGMVAYASSFDQAGPMAQTA 217
>gi|420249771|ref|ZP_14753009.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. BT03]
gi|398063480|gb|EJL55210.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. BT03]
Length = 473
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 91/151 (60%), Gaps = 2/151 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L GL IKD+ D G T +GS + H A VV L+ GA IGKT EFA
Sbjct: 79 LEGLPIGIKDLIDTNGIETRYGSAAYV--GHVPTVDADVVKALVDQGAIIIGKTTTHEFA 136
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+G++ + +G +NP + IPGGSS G+AVA+A+ V +GTDT G VR+PA+ CG+
Sbjct: 137 WGVSTASAKFGDTLNPLDSTRIPGGSSGGAAVAIASGAVRAGVGTDTGGSVRIPAALCGV 196
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
+G++P+HGT+S GV P + + D VGLL
Sbjct: 197 VGFKPTHGTISTRGVFPLAPTCDHVGLLGEQ 227
>gi|424878940|ref|ZP_18302575.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WU95]
gi|392519611|gb|EIW44342.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WU95]
Length = 447
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 96/152 (63%), Gaps = 2/152 (1%)
Query: 75 GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFG 134
G+ A+KD+ D+ G VT GS + +R+ A A VV+ + G IGKT L EFAF
Sbjct: 66 GVPIAVKDLLDIAGTVTTAGS-EIRRNLPPAREDAEVVSSIHGVGLISIGKTNLSEFAFS 124
Query: 135 ITGENKHYGTPVNPQMPSH-IPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGIL 193
G N H+GTP+ P +PGGSSSGSA+AV +V A+G+DT G +RVPA+F G+
Sbjct: 125 GLGINPHFGTPIPGYAPEQRVPGGSSSGSAIAVERGVVLAAIGSDTAGSIRVPAAFNGLH 184
Query: 194 GYRPSHGTVSMIGVLPNSQSLDTVGLLARNAS 225
G+RPS G M GV P + S DT+G +AR+AS
Sbjct: 185 GFRPSTGRYPMRGVHPLASSFDTLGPIARSAS 216
>gi|408377409|ref|ZP_11175010.1| allophanate hydrolase [Agrobacterium albertimagni AOL15]
gi|407748400|gb|EKF59915.1| allophanate hydrolase [Agrobacterium albertimagni AOL15]
Length = 600
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 99/165 (60%), Gaps = 9/165 (5%)
Query: 57 ELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLL 116
EL P+ Q +PL G+ FA+KD +V G T PD++ + A A VV L
Sbjct: 58 ELGPYDQ------ERPLYGIPFAVKDNINVAGMPTTCACPDFE---YAATADAFVVAKLK 108
Query: 117 KNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALG 176
GA IGKT LD+FA G+ G Y P N PS +PGGSSSGSAVAVA +V FALG
Sbjct: 109 AAGALPIGKTNLDQFATGLVGIRSPYTIPRNAIDPSIVPGGSSSGSAVAVARGIVPFALG 168
Query: 177 TDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLA 221
TDT G RVPA+ I+G +P+ GT+S G++P ++LDT+ + A
Sbjct: 169 TDTAGSGRVPAALNNIVGLKPTLGTLSATGMVPACRTLDTISIFA 213
>gi|338975420|ref|ZP_08630773.1| putative amidase [Bradyrhizobiaceae bacterium SG-6C]
gi|338231490|gb|EGP06627.1| putative amidase [Bradyrhizobiaceae bacterium SG-6C]
Length = 432
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 186/400 (46%), Gaps = 40/400 (10%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
++R PL G IKD+FDVKG VT GS AE AV+V L + GA KT
Sbjct: 50 SSRGPLDGAILTIKDLFDVKGDVTRAGSKVLASRGKPAEADAVIVQRLREAGAVIAAKTN 109
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
+ EFA+ G N H+GTP NP +PGGSSSG+AVA A + A+GTDT G R+PA
Sbjct: 110 MTEFAYSGLGANPHFGTPGNPADRKRVPGGSSSGAAVAAADAFCEIAIGTDTGGSTRIPA 169
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
+FCG+ G++P+ V G P S +LD++G +AR+ + VL
Sbjct: 170 AFCGVTGFKPTVKRVPRTGAFPLSFTLDSIGPIARSVADCADADAVL------------- 216
Query: 248 LIFADDIFQLSKVPKLKTIH---VISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQ 304
A ++ P LK + V I+ L + +AS+ S
Sbjct: 217 ---AGEMPSPLVPPSLKEVRAGFVQGYPIDGLDDIVGKAYPQALAKLASHWKS------- 266
Query: 305 STSPENGTATLKALSSVMLSLQRY-----EFKTIYEEWVKSAKPRLGYNVFERVLEAINT 359
TLKAL + + +R E I+ + A + NV R+L +
Sbjct: 267 -----GADVTLKALDIMHTANERGGVAPPEAYAIHRTLLAEAGEGVDPNVRARLLRSEKI 321
Query: 360 TQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVS--DPPL-KLNTKKTYSAEFHDRTLV 416
+ + + + R A + + +LV+PTV P + +++T ++++ + + + L+
Sbjct: 322 SAADYILALRDRERGIAQMDAVFDQVDVLVMPTVQIVAPTMDEISTPESFN-KRNVQALM 380
Query: 417 LSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+SI + C V++PI N P+ + + HG D+ LL
Sbjct: 381 NTSIWNFFDVCAVSLPIRFGNALPVGLMLVGRHGDDRRLL 420
>gi|261364025|ref|ZP_05976908.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria mucosa
ATCC 25996]
gi|288568055|gb|EFC89615.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria mucosa
ATCC 25996]
Length = 485
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 89/152 (58%), Gaps = 2/152 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A KD+F G+ + S D+ + TA VV LL G +G+T +DEFA
Sbjct: 68 LTGVPIAYKDIFCQTGWRSACSSK--MLDNFVSPYTATVVQNLLDEGMVTLGRTNMDEFA 125
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G T E YG NP P H+PGGSS GSA VAA+L ALG+DT G +R PAS CGI
Sbjct: 126 MGSTNETSFYGATKNPWNPEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGI 185
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
G +P++GTVS G++ + S D G +A+ A
Sbjct: 186 TGIKPTYGTVSRFGMVAYASSFDQAGPMAQTA 217
>gi|167761365|ref|ZP_02433492.1| hypothetical protein CLOSCI_03773 [Clostridium scindens ATCC 35704]
gi|167661031|gb|EDS05161.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Clostridium scindens ATCC 35704]
Length = 516
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 98/163 (60%), Gaps = 6/163 (3%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ AIKD K +T S ++ + TA V L K GA IGKT +DEF
Sbjct: 70 PLAGVPVAIKDNLCTKDMLTTCSSKIL--ENFKPTFTAEAVRNLEKAGAVIIGKTNMDEF 127
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G T E ++G NP H+PGGSS GS AVAA+ FALGTDT G +R P+S+CG
Sbjct: 128 AMGSTTETSYFGETRNPWNLKHVPGGSSGGSCTAVAAEECAFALGTDTGGSIRQPSSYCG 187
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN----ASILHRV 230
++G +P++GTVS G++ SLD VG +A++ A+IL +
Sbjct: 188 VVGIKPTYGTVSRYGLVAYGSSLDQVGPIAKDVTDCAAILEAI 230
>gi|349610959|ref|ZP_08890277.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria sp.
GT4A_CT1]
gi|348615256|gb|EGY64782.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria sp.
GT4A_CT1]
Length = 482
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 89/152 (58%), Gaps = 2/152 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A KD+F G+ + S D+ + TA VV LL G +G+T +DEFA
Sbjct: 68 LTGVPIAYKDIFCQTGWRSACSSK--MLDNFVSPYTATVVQNLLDEGMVTLGRTNMDEFA 125
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G T E YG NP P H+PGGSS GSA VAA+L ALG+DT G +R PAS CGI
Sbjct: 126 MGSTNETSFYGATKNPWNPEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGI 185
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
G +P++GTVS G++ + S D G +A+ A
Sbjct: 186 TGIKPTYGTVSRFGMVAYASSFDQAGPMAQTA 217
>gi|255065646|ref|ZP_05317501.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria sicca ATCC
29256]
gi|255049964|gb|EET45428.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria sicca ATCC
29256]
Length = 482
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 89/152 (58%), Gaps = 2/152 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A KD+F G+ + S D+ + TA VV LL G +G+T +DEFA
Sbjct: 68 LTGVPIAYKDIFCQTGWRSACSSK--MLDNFVSPYTATVVQNLLNEGIVTLGRTNMDEFA 125
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G T E YG NP P H+PGGSS GSA VAA+L ALG+DT G +R PAS CGI
Sbjct: 126 MGSTNETSFYGATKNPWNPEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGI 185
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
G +P++GTVS G++ + S D G +A+ A
Sbjct: 186 TGIKPTYGTVSRFGMVAYASSFDQAGPMAQTA 217
>gi|254786061|ref|YP_003073490.1| amidohydrolase, AtzE family [Teredinibacter turnerae T7901]
gi|237685241|gb|ACR12505.1| amidohydrolase, AtzE family [Teredinibacter turnerae T7901]
Length = 463
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/166 (49%), Positives = 104/166 (62%), Gaps = 1/166 (0%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
A PLAG FA+K++FD+ G VT GS +R H A + A ++ L GA G +
Sbjct: 62 AEMPLAGATFAVKNLFDIAGEVTLAGSKLNER-HSPASQDATLIERLENAGAILTGALNM 120
Query: 129 DEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPAS 188
E+A+ TGEN H+G NP H+ GGSSSGSA AVAA LVDF+LG+DT G +RVPAS
Sbjct: 121 GEYAYDFTGENCHHGNCGNPYKLDHMAGGSSSGSAAAVAAGLVDFSLGSDTNGSIRVPAS 180
Query: 189 FCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL 234
FCGI G +P++G + G P S SLD +G LAR+ L RV VL
Sbjct: 181 FCGIFGLKPTYGRLPRTGTFPFSDSLDHLGPLARSTQDLARVYDVL 226
>gi|344167864|emb|CCA80112.1| putative Glutamyl-tRNA amidotransferase/amidase (gatA) [blood
disease bacterium R229]
Length = 448
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 121/395 (30%), Positives = 174/395 (44%), Gaps = 41/395 (10%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERT--AVVVTLLLKNGATCIGKTVLDE 130
LAGL +IKD+FDV G VT GS + H+ T A V L GA +G+T + E
Sbjct: 73 LAGLPVSIKDLFDVAGQVTAAGS---RALAHQPAATSDATAVARLRAAGAVLLGRTNMSE 129
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FAF G N HYGTP P + GGS+SG AV VA + ALGTDT G +R+P++FC
Sbjct: 130 FAFSGLGLNPHYGTPRTPADGTRAAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPSAFC 189
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL----LQLNAVEPRRAR 246
+ G++P+ V M G +P S SLD+ G LA + V VL L +AV P
Sbjct: 190 ALTGFKPTARRVPMAGGVPLSTSLDSGGPLANSVDCCAIVDAVLSGQTLDTDAV-PLAGL 248
Query: 247 RLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQST 306
RL D + T +A+ L EH + + + P L L
Sbjct: 249 RLGLTRDYVGADLDDTVTT--AFERAVARL------EHAGA-RIVRFDFPELLRL----- 294
Query: 307 SPE-NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIK 365
PE NG L A E + + A+ + + V R+ +
Sbjct: 295 -PEINGGGGLPA----------AEAWAWHRPHLARAEAQYDHRVAARIRRGEQMSAAAYL 343
Query: 366 ILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAE-FHDRTLVL---SSIG 421
+ R M AA ++ L + ++PTV+ P ++ + A+ F LVL S I
Sbjct: 344 DVMAARERMIAAARKRLGNLDAWLMPTVAIVPPEVAPLEADDAQFFRANALVLRNPSVIN 403
Query: 422 SMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+ GC + +P+ E P+ +S D +L
Sbjct: 404 FLDGCA-LTLPVHAAGELPVGLSLCGLAEDDARIL 437
>gi|421464879|ref|ZP_15913568.1| amidase [Acinetobacter radioresistens WC-A-157]
gi|400204808|gb|EJO35791.1| amidase [Acinetobacter radioresistens WC-A-157]
Length = 370
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 119/380 (31%), Positives = 175/380 (46%), Gaps = 36/380 (9%)
Query: 76 LKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGI 135
L +KD +++G T GS + D A R A VV +L KT L E AFGI
Sbjct: 15 LTVMVKDSINIQGVKTISGSRALE-DTAPAARNAEVVEHILNADCMITAKTNLHELAFGI 73
Query: 136 TGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGY 195
TG N YGTPVNP+ IPGGSSSGSA AVAA L DF LGTDT G +R+PA+ CG+ G
Sbjct: 74 TGINHAYGTPVNPKYLELIPGGSSSGSAAAVAANLADFTLGTDTGGSIRMPAACCGVYGL 133
Query: 196 RPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIF 255
+P+ G VS GV P SLD VG A + ++ + ++P A D
Sbjct: 134 KPTFGRVSRQGVHPAQSSLDCVGPFANSVEMIETAMQI------IDPT-----FTAQDSA 182
Query: 256 QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTATL 315
K+ LK ++ E + Y ++ V P +
Sbjct: 183 AAPKLAWLKVQQAEAEVTECIENYLKQANLQV-------------------EPVEAASFE 223
Query: 316 KALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNEMR 375
KA + M + YE Y E +K+ +G +V R+L+A TT + ++ +V+ E
Sbjct: 224 KAFHAGM-QIINYENWQAYGELIKTG--LIGADVQGRLLKAAETTLEQVQQAEQVKAEFT 280
Query: 376 AALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGK 435
+ LL+ L++PT+ P K+ + A + LV ++SG ++IP+
Sbjct: 281 QEIDALLEQYDALLLPTLPKIPPKVADAENTVAFLNLTGLVRPF--NLSGHPAISIPLET 338
Query: 436 YNEHPISISFITYHGGDKFL 455
P+ + +T D+ L
Sbjct: 339 EQGSPVGLQIVTKRNADEQL 358
>gi|294668799|ref|ZP_06733892.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria elongata
subsp. glycolytica ATCC 29315]
gi|291309316|gb|EFE50559.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria elongata
subsp. glycolytica ATCC 29315]
Length = 482
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 89/152 (58%), Gaps = 2/152 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A KD+F G+ + S D+ + TA VV LL G +G+T +DEFA
Sbjct: 68 LTGVPIAYKDIFCQTGWRSACSSK--MLDNFVSPYTATVVQNLLDEGMVTLGRTNMDEFA 125
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G T E YG NP P H+PGGSS GSA VAA+L ALG+DT G +R PAS CGI
Sbjct: 126 MGSTNETSFYGATKNPWNPEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGI 185
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
G +P++GTVS G++ + S D G +A+ A
Sbjct: 186 TGIKPTYGTVSRFGMVAYASSFDQAGPMAQTA 217
>gi|346308921|ref|ZP_08851025.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Dorea
formicigenerans 4_6_53AFAA]
gi|345901470|gb|EGX71269.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Dorea
formicigenerans 4_6_53AFAA]
Length = 488
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 104/188 (55%), Gaps = 7/188 (3%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ AIKD KG T S ++ T+ V L K GA IGKT +DEF
Sbjct: 70 PLAGVPVAIKDNMCTKGMRTTCSSKIL--ENFVPTFTSEAVLNLEKAGAVIIGKTNMDEF 127
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G T E +YG NP H+PGGSS GS AVAA +ALG+DT G +R P+SFCG
Sbjct: 128 AMGSTTETSYYGVTRNPWNLGHVPGGSSGGSCAAVAAGECAYALGSDTGGSIRQPSSFCG 187
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN----ASILHRVG-HVLLQLNAVEPRRAR 246
+ G +P++GTVS G++ SLD +G +A++ A+IL + H + +VE
Sbjct: 188 VTGIKPTYGTVSRYGLIAYGSSLDQIGPIAKDVTDCATILETIASHDVKDSTSVEREYDF 247
Query: 247 RLIFADDI 254
ADD+
Sbjct: 248 TSALADDV 255
>gi|225375174|ref|ZP_03752395.1| hypothetical protein ROSEINA2194_00798 [Roseburia inulinivorans DSM
16841]
gi|225212984|gb|EEG95338.1| hypothetical protein ROSEINA2194_00798 [Roseburia inulinivorans DSM
16841]
Length = 482
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 96/163 (58%), Gaps = 6/163 (3%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ AIKD K +T S + + TA V L K GA IGKT +DEF
Sbjct: 67 PLAGVPVAIKDNMCTKDLLTTCSSKILY--NFKPTYTAEAVENLEKAGAVIIGKTNMDEF 124
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G T E YG NP +H+PGGSS GS AVAA+ +ALG+DT G +R P+SFCG
Sbjct: 125 AMGSTTETSAYGATKNPWNEAHVPGGSSGGSCAAVAAEECSYALGSDTGGSIRQPSSFCG 184
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN----ASILHRV 230
+ G +P++GTVS G++ SLD +G +A++ A+IL +
Sbjct: 185 VTGIKPTYGTVSRYGLIAYGSSLDQIGPIAKDVTDCATILEAI 227
>gi|254563032|ref|YP_003070127.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Methylobacterium
extorquens DM4]
gi|254270310|emb|CAX26306.1| glutamyl-tRNA(Gln) amidotransferase (subunit A) [Methylobacterium
extorquens DM4]
Length = 611
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 91/224 (40%), Positives = 115/224 (51%), Gaps = 23/224 (10%)
Query: 29 VVLAETLRRRRNPKLNGRVDFGAFLERFE----------LIPFPQPPPPAARQPLAGLKF 78
VLAE RR + D G FL R L PF A +PL G+ F
Sbjct: 24 AVLAEIDRR-----IAAADDPGIFLARVPEAEMQAAARALGPFDP-----ANKPLWGVPF 73
Query: 79 AIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGE 138
A+KD DV G T PD+ + + TA LL GA +GKT LD+FA G+ G
Sbjct: 74 AVKDNVDVAGLPTTAACPDFA---YTPQATAPAAERLLAAGAILVGKTNLDQFATGLVGV 130
Query: 139 NKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPS 198
Y P N P+ +PGGSSSGSAVAVA LV FALGTDT G RVPA I+G +PS
Sbjct: 131 RTPYPVPKNAIDPAIVPGGSSSGSAVAVARGLVTFALGTDTAGSGRVPAGLNNIVGLKPS 190
Query: 199 HGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
G+VS GV+P ++LDT+ + A + V V+ + +P
Sbjct: 191 LGSVSGRGVVPACRTLDTLSIFAGTVAEADAVFRVMAGYDPQDP 234
>gi|300692394|ref|YP_003753389.1| glutamyl-tRNA amidotransferase/amidase (gatA) [Ralstonia
solanacearum PSI07]
gi|299079454|emb|CBJ52129.1| putative Glutamyl-tRNA amidotransferase/amidase (gatA) [Ralstonia
solanacearum PSI07]
Length = 448
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 121/395 (30%), Positives = 174/395 (44%), Gaps = 41/395 (10%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERT--AVVVTLLLKNGATCIGKTVLDE 130
LAGL +IKD+FDV G VT GS + H+ T A V L GA +G+T + E
Sbjct: 73 LAGLPVSIKDLFDVAGQVTAAGS---RALAHQPAATSDATAVARLRAAGAVLLGRTNMSE 129
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FAF G N HYGTP P + GGS+SG AV VA + ALGTDT G +R+P++FC
Sbjct: 130 FAFSGLGLNPHYGTPRTPADGTRAAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPSAFC 189
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL----LQLNAVEPRRAR 246
+ G++P+ V M G +P S SLD+ G LA + V VL L +AV P
Sbjct: 190 ALTGFKPTARRVPMAGGVPLSTSLDSGGPLANSVDCCAIVDAVLSGQTLDTDAV-PLAGL 248
Query: 247 RLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQST 306
RL D + T +A+ L EH + + + P L L
Sbjct: 249 RLGLTRDYVGADLDDTVTT--AFERAVARL------EHAGA-RIVRFDFPELLRL----- 294
Query: 307 SPE-NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIK 365
PE NG L A E + + A+ + + V R+ +
Sbjct: 295 -PEINGGGGLPA----------AEAWAWHRPHLARAEAQYDHRVAARIRRGEQMSAAAYL 343
Query: 366 ILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAE-FHDRTLVL---SSIG 421
+ R M AA ++ L + ++PTV+ P ++ + A+ F LVL S I
Sbjct: 344 DVMAARERMIAAARKRLGNLDAWLMPTVAIVPPEVAPLEADDAQFFRANALVLRNPSVIN 403
Query: 422 SMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+ GC + +P+ E P+ +S D +L
Sbjct: 404 FLDGCA-LTLPVHAAGELPVGLSLCGLAEDDARIL 437
>gi|254672151|emb|CBA04948.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Neisseria
meningitidis alpha275]
Length = 481
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 98/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL G +G+T +DEFA G T EN YG NP H+PGG
Sbjct: 92 -MLDNFISPYTATVVQKLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNLEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQA 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>gi|344231944|gb|EGV63823.1| amidase signature enzyme [Candida tenuis ATCC 10573]
Length = 467
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 100/170 (58%), Gaps = 5/170 (2%)
Query: 75 GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFG 134
G KF +KD G T GS E+ A VV LL G +GKT LDEF G
Sbjct: 36 GEKFTVKDNILTIGTTT-CGSKILS--EFESPFDATVVKLLQDKGYNLVGKTNLDEFGMG 92
Query: 135 ITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+ N ++G VNP + ++ GGSS GSA VA L +F+LGTDT G +R+PAS CG+
Sbjct: 93 SSNTNSNFGPSVNPLFEDGEYVTGGSSGGSAATVAGGLCEFSLGTDTGGSIRLPASNCGV 152
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
G++PS+G +S GV+P +Q+LDTVG++AR + V VL + ++ +P
Sbjct: 153 YGFKPSYGRLSRWGVIPYAQTLDTVGIIARTCEKVQEVFEVLDKYDSKDP 202
>gi|255505923|ref|ZP_05348905.3| glutamyl-tRNA(Gln) amidotransferase, A subunit [Bryantella
formatexigens DSM 14469]
gi|255265092|gb|EET58297.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Marvinbryantia formatexigens DSM 14469]
Length = 498
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 90/154 (58%), Gaps = 2/154 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ AIKD KG +T S ++ TA V L G +GKT +DEF
Sbjct: 78 PLAGVPAAIKDNMCTKGLLTTCSSRIL--ENFVPTYTAQAVENLEAAGVVVLGKTNMDEF 135
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G T E YG NP P H+PGGSS GS AVAA FALG+DT G +R P+SFCG
Sbjct: 136 AMGSTTETSAYGVTRNPWNPEHVPGGSSGGSCAAVAANECSFALGSDTGGSIRQPSSFCG 195
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNAS 225
+ G +P++GTVS G++ SLD +G +A++ S
Sbjct: 196 VTGIKPTYGTVSRYGLIAYGSSLDQIGPVAKDVS 229
>gi|298290657|ref|YP_003692596.1| amidohydrolase, AtzE family [Starkeya novella DSM 506]
gi|296927168|gb|ADH87977.1| amidohydrolase, AtzE family [Starkeya novella DSM 506]
Length = 469
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 104/176 (59%), Gaps = 1/176 (0%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ FA+K++FD+KG T GS RD A R A +V L GA C+G + E+
Sbjct: 77 PLAGVPFAVKNLFDLKGLPTLAGS-KINRDRPPAARDATLVERLSAAGAVCLGGLSMGEY 135
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+ TGEN H G NP P H+ GGSS GS AV +LV F+LG+DT G +RVP+SFCG
Sbjct: 136 AYDFTGENLHDGRSANPHDPEHMTGGSSGGSGAAVGGKLVPFSLGSDTNGSIRVPSSFCG 195
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
I G +P++G +S P SLD +G AR+ L L+ L+ +P +A R
Sbjct: 196 IFGLKPTYGRLSRARSFPFVASLDHLGPFARHVGDLAATYDALVGLDPDDPAQADR 251
>gi|421540606|ref|ZP_15986751.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 93004]
gi|402318760|gb|EJU54276.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 93004]
Length = 481
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 98/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL G +G+T +DEFA G T EN YG NP H+PGG
Sbjct: 92 -MLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNHEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQA 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>gi|113867520|ref|YP_726009.1| amidase [Ralstonia eutropha H16]
gi|113526296|emb|CAJ92641.1| Glutamyl/Aspartyl-tRNA(Gln/Asp) amidotransferasesubunit A
[Ralstonia eutropha H16]
Length = 451
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 127/410 (30%), Positives = 190/410 (46%), Gaps = 42/410 (10%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
PLAGL ++KD++DV G VT S ++D A A VV L GA +G+T + E
Sbjct: 65 HPLAGLPVSVKDLYDVAGEVTSAASL-VRKDAAPATADATVVARLRAAGAALVGRTNMTE 123
Query: 131 FAFGITGENKHYGTPVNPQMP---SHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
FAF G N HYGTP NP + IPGGSSSG+AV+VA L ALG+DT G +R+PA
Sbjct: 124 FAFSGVGINPHYGTPANPAGTDGVARIPGGSSSGAAVSVALGLAVAALGSDTGGSIRIPA 183
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPR---- 243
+ CGI G++P+ V + G P S +LDT +AR S V V+ +AV PR
Sbjct: 184 ALCGITGFKPTARRVPLTGAFPLSYTLDTACAMARTVSDCIAVDSVIAD-SAVIPRVTNP 242
Query: 244 RARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRA 303
A RL + P V+++A + G + + + + L GL A
Sbjct: 243 AATRLAIPRQVLLDDLDP------VVARAFDRALGRLSAAGVQLEHVDLPELGELAGLNA 296
Query: 304 QSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDN 363
Q +A A+ +L+ +R +Y+ V S R+ N + +
Sbjct: 297 QGGF---SSAEAFAIHRHLLAARR----DLYDPRVAS-----------RIDRGANVSAAD 338
Query: 364 IKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVL----SS 419
L + R + A ++ L +V PTV ++ +T A+F +L S+
Sbjct: 339 YIDLGRARLDWIARMEARLARFDAVVCPTVPMVAPEIAPLRTDDAQFFRVNALLLRNTSA 398
Query: 420 IGSMSGCCQVAIPIGKYNEHPISISFITYHGG--DKFLLDTVLDLYDSLQ 467
+ G C +++P +E P+ + + HG D LL T L L +Q
Sbjct: 399 FNFLDG-CSISLPCHAPDELPVGL--MLSHGPMRDAGLLGTALALERIVQ 445
>gi|433536972|ref|ZP_20493477.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 77221]
gi|432273908|gb|ELL29005.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 77221]
Length = 481
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 98/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGIPVAYKDIFCQTGWRSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL G +G+T +DEFA G T EN YG NP H+PGG
Sbjct: 92 -MLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNLEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQT 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>gi|209963508|ref|YP_002296423.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Rhodospirillum
centenum SW]
gi|209956974|gb|ACI97610.1| glutamyl-tRNA(Gln) amidotransferase subunit A, putative
[Rhodospirillum centenum SW]
Length = 461
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 177/388 (45%), Gaps = 27/388 (6%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG A+KD+FD++G T G+ D EA TA + LL+ G +GK E
Sbjct: 65 PLAGRTLAVKDLFDLRGVPTAAGARTPVVD--EAPATATALDHLLRAGMIPLGKAATVEL 122
Query: 132 AFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
AFG G N+ GTP NP + +PGGSSSGSAVAVAA L D ALG+DT G +R+P +
Sbjct: 123 AFGTWGINRATGTPRNPWDMTVARVPGGSSSGSAVAVAAGLADMALGSDTGGSIRIPCAL 182
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
GI G + + G VS GV+P S +LDTVG +A + + + + + +P R
Sbjct: 183 NGISGIKTTVGRVSRAGVVPLSPTLDTVGPMAWSVAEAAALLEAMAGPDPADPATLERPG 242
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
F L++ + + V+ A L+ +P + A +V +G R Q P
Sbjct: 243 FG-AAAALARSVRGCRLAVLGDA--DLASVADP--VGAAYLEALSVLERQGARLQEVRPA 297
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
+ ++ + + + + V+ P + R+ A ++T+ + L
Sbjct: 298 VAPGACVEPTGRLIGAEGWRR---WSDRVERFAPEMDPGTLARLQAAASSTEADHARLLA 354
Query: 370 VRNEMRAALQRLLKDDKILVIPT--VSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCC 427
R + ++D L+ PT V+ PPL + TL SS M+
Sbjct: 355 ARAADQGRFHAWMQDFDALLTPTVPVTAPPLDTADET---------TLPFSSFTRMANWL 405
Query: 428 Q---VAIPIGKYNEH-PISISFITYHGG 451
VA+P G+ E P+S+ + G
Sbjct: 406 DLPAVALPCGQSGEGLPVSLQVLALPWG 433
>gi|421544648|ref|ZP_15990724.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM140]
gi|421546763|ref|ZP_15992808.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM183]
gi|421549015|ref|ZP_15995039.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM2781]
gi|421552966|ref|ZP_15998938.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM576]
gi|402323008|gb|EJU58458.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM183]
gi|402323839|gb|EJU59281.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM140]
gi|402325694|gb|EJU61103.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM2781]
gi|402330145|gb|EJU65494.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM576]
Length = 481
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 98/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL G +G+T +DEFA G T EN YG NP H+PGG
Sbjct: 92 -MLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNLEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQA 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>gi|421565652|ref|ZP_16011425.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM3081]
gi|402344087|gb|EJU79229.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM3081]
Length = 481
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 98/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL G +G+T +DEFA G T EN YG NP H+PGG
Sbjct: 92 -MLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNLEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQT 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>gi|336423353|ref|ZP_08603484.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lachnospiraceae
bacterium 5_1_57FAA]
gi|336004781|gb|EGN34838.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Lachnospiraceae
bacterium 5_1_57FAA]
Length = 516
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 98/163 (60%), Gaps = 6/163 (3%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ AIKD K +T S ++ + TA V L K GA IGKT +DEF
Sbjct: 70 PLAGVPVAIKDNLCTKDMLTTCSSKIL--ENFKPTFTAEAVRNLEKAGAVIIGKTNMDEF 127
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G T E ++G NP H+PGGSS GS AVAA+ FALGTDT G +R P+S+CG
Sbjct: 128 AMGSTTETSYFGETRNPWNLKHVPGGSSGGSCTAVAAEECAFALGTDTGGSIRQPSSYCG 187
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN----ASILHRV 230
++G +P++GTVS G++ SLD +G +A++ A+IL +
Sbjct: 188 VVGIKPTYGTVSRYGLVAYGSSLDQIGPIAKDVTDCAAILEAI 230
>gi|265983701|ref|ZP_06096436.1| amidase [Brucella sp. 83/13]
gi|306838702|ref|ZP_07471537.1| amidase [Brucella sp. NF 2653]
gi|264662293|gb|EEZ32554.1| amidase [Brucella sp. 83/13]
gi|306406189|gb|EFM62433.1| amidase [Brucella sp. NF 2653]
Length = 445
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 94/154 (61%), Gaps = 1/154 (0%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G +IKD+FDV G T GS +RD A AV+V L GA IGKT + EF
Sbjct: 52 PLDGRIVSIKDLFDVAGEPTLAGSV-VRRDAPPAGCDAVIVQRLRNAGAVIIGKTHMTEF 110
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
AF G N HYG P N P+ IPGGSSSG+AV+VA + A+G+DT G VR+PA+ G
Sbjct: 111 AFTPVGLNPHYGEPGNAIDPARIPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPAALNG 170
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNAS 225
++G++P+ + + G P + SLD+VG L R +
Sbjct: 171 LVGFKPTARRIPLEGAFPLAPSLDSVGPLTRTVA 204
>gi|385328621|ref|YP_005882924.1| Glu-tRNA(Gln) amidotransferase subunit A [Neisseria meningitidis
alpha710]
gi|385341729|ref|YP_005895600.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis M01-240149]
gi|385851054|ref|YP_005897569.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis M04-240196]
gi|385855408|ref|YP_005901921.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis M01-240355]
gi|385857425|ref|YP_005903937.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis NZ-05/33]
gi|416170473|ref|ZP_11608321.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis OX99.30304]
gi|416187522|ref|ZP_11614235.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis M0579]
gi|416187633|ref|ZP_11614245.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis M0579]
gi|308389473|gb|ADO31793.1| Glu-tRNA(Gln) amidotransferase subunit A [Neisseria meningitidis
alpha710]
gi|325130407|gb|EGC53171.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis OX99.30304]
gi|325136142|gb|EGC58750.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis M0579]
gi|325136451|gb|EGC59058.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis M0579]
gi|325201935|gb|ADY97389.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis M01-240149]
gi|325204349|gb|ADY99802.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis M01-240355]
gi|325205877|gb|ADZ01330.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis M04-240196]
gi|325208314|gb|ADZ03766.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis NZ-05/33]
Length = 481
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 98/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL G +G+T +DEFA G T EN YG NP H+PGG
Sbjct: 92 -MLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNLEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQA 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>gi|187924147|ref|YP_001895789.1| amidase [Burkholderia phytofirmans PsJN]
gi|187715341|gb|ACD16565.1| Amidase [Burkholderia phytofirmans PsJN]
Length = 374
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 161/350 (46%), Gaps = 46/350 (13%)
Query: 74 AGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAF 133
AG AIKD D+ GY T S D A++ A VV L+ +G +GK + E AF
Sbjct: 13 AGPSIAIKDTIDIAGYATTAASRALA-DTPPAQQHAEVVERLIASGWHIVGKANMHELAF 71
Query: 134 GITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGIL 193
G+TG N + GTP NPQ + IPGGSSSGSA AV +L D ALGTDT G +R PA+ CG++
Sbjct: 72 GMTGINDYTGTPQNPQDAARIPGGSSSGSAAAVGLKLADAALGTDTGGSIRGPAACCGVI 131
Query: 194 GYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADD 253
G +P+ G VS +GV P +LD VG AR+ +L
Sbjct: 132 GLKPTFGRVSRLGVAPRESTLDCVGPFARDMRML-------------------------- 165
Query: 254 IFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQS-------T 306
V ++ I V A + +Q + + Q A+ RA T
Sbjct: 166 ------VAAMQAIAVNFDA-NTAHAWQGACKVGIVQAEAAAEIVEAVTRAADKASCVAHT 218
Query: 307 SPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKI 366
P G L A L++ E + V S K LG ++ R+ A NTT +
Sbjct: 219 LPLAG---LAAAFDAGLTVINVETSRAFGHLVASGK--LGADLDARLRAAANTTAAQLDA 273
Query: 367 LYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLV 416
+VR + AA+ L + +L++PT+ P+ L ++ ++ +L+
Sbjct: 274 AEQVRRDFTAAVDHALDNVDVLILPTLPALPITLEQARSGTSVIAMSSLI 323
>gi|421538303|ref|ZP_15984480.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 93003]
gi|402317122|gb|EJU52661.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 93003]
Length = 481
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 98/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL G +G+T +DEFA G T EN YG NP H+PGG
Sbjct: 92 -MLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNLEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQA 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>gi|423696671|ref|ZP_17671161.1| amidase family protein [Pseudomonas fluorescens Q8r1-96]
gi|388003770|gb|EIK65097.1| amidase family protein [Pseudomonas fluorescens Q8r1-96]
Length = 461
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 95/154 (61%), Gaps = 5/154 (3%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A KD+FDV G T G+ +RD A A VV LL K G +GKT L EFA
Sbjct: 77 LDGVPVAWKDMFDVAGSPTTAGAA-VRRDITPALLDANVVGLLAKAGMVSVGKTNLSEFA 135
Query: 133 FGITGENKHYGTPVNP---QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
+ G N H+GTP NP P IPGGSSSGSAVAVAA +V A+GTDT G +R+PA+F
Sbjct: 136 YSGLGLNPHFGTPHNPVGLDQP-RIPGGSSSGSAVAVAAGIVPIAMGTDTAGSIRIPAAF 194
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
G++G R S S GV P + +LD+VG L R+
Sbjct: 195 NGLVGVRSSCRRYSREGVFPLAHTLDSVGPLTRS 228
>gi|416182759|ref|ZP_11612195.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis M13399]
gi|325134409|gb|EGC57054.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis M13399]
Length = 481
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 98/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL G +G+T +DEFA G T EN YG NP H+PGG
Sbjct: 92 -MLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNLEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQA 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>gi|15677221|ref|NP_274374.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Neisseria
meningitidis MC58]
gi|385853020|ref|YP_005899534.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis H44/76]
gi|416196331|ref|ZP_11618101.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis CU385]
gi|418288541|ref|ZP_12901016.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis NM233]
gi|418290774|ref|ZP_12902888.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis NM220]
gi|421542656|ref|ZP_15988763.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM255]
gi|421567704|ref|ZP_16013438.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM3001]
gi|427828036|ref|ZP_18995055.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A
subunit [Neisseria meningitidis H44/76]
gi|433465298|ref|ZP_20422780.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM422]
gi|433488636|ref|ZP_20445798.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis M13255]
gi|433490678|ref|ZP_20447804.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM418]
gi|433505060|ref|ZP_20461999.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 9506]
gi|433507361|ref|ZP_20464269.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 9757]
gi|433509572|ref|ZP_20466441.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 12888]
gi|433511567|ref|ZP_20468394.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 4119]
gi|24211724|sp|Q9JYZ9.1|GATA_NEIMB RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|7226601|gb|AAF41730.1| Glu-tRNA(Gln) amidotransferase, subunit A [Neisseria meningitidis
MC58]
gi|316984162|gb|EFV63140.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A
subunit [Neisseria meningitidis H44/76]
gi|325140425|gb|EGC62946.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis CU385]
gi|325200024|gb|ADY95479.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis H44/76]
gi|372201016|gb|EHP14996.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis NM220]
gi|372201673|gb|EHP15566.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis NM233]
gi|389605519|emb|CCA44436.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Neisseria
meningitidis alpha522]
gi|402317486|gb|EJU53024.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM255]
gi|402343737|gb|EJU78883.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM3001]
gi|432203242|gb|ELK59296.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM422]
gi|432223469|gb|ELK79250.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis M13255]
gi|432227669|gb|ELK83378.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM418]
gi|432241185|gb|ELK96715.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 9506]
gi|432241726|gb|ELK97255.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 9757]
gi|432246960|gb|ELL02406.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 12888]
gi|432247615|gb|ELL03052.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 4119]
Length = 481
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 98/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL G +G+T +DEFA G T EN YG NP H+PGG
Sbjct: 92 -MLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNLEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQT 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>gi|222081229|ref|YP_002540592.1| hypothetical protein Arad_7518 [Agrobacterium radiobacter K84]
gi|221725908|gb|ACM28997.1| amidase family protein [Agrobacterium radiobacter K84]
Length = 456
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 106/179 (59%), Gaps = 3/179 (1%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
+R L G+ A KD+F ++G T GS R+ +E A +V L + G +G+ +
Sbjct: 68 SRGLLDGIPIAWKDLFAIRGLPTTAGSTVLAREAPASE-DADIVQALAEAGMVSVGRVNM 126
Query: 129 DEFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
EFAF G N HYGT +NP + +PGGSSSGSAVAVAA LV ++GTDT G VR+P
Sbjct: 127 SEFAFSGLGLNPHYGTSLNPLSKDVERVPGGSSSGSAVAVAAGLVPVSIGTDTGGSVRIP 186
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRA 245
++F G++GY+ S G SM GV P + SLD++G L R+ V + +L A + RA
Sbjct: 187 SAFNGLVGYKASRGRYSMAGVFPLATSLDSLGPLCRSVQDAIWVDAAMRRLTAPQIVRA 245
>gi|86136120|ref|ZP_01054699.1| amidase family protein [Roseobacter sp. MED193]
gi|85826994|gb|EAQ47190.1| amidase family protein [Roseobacter sp. MED193]
Length = 423
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 175/394 (44%), Gaps = 31/394 (7%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G A+K D++G + GS ++ + A+ A +V + G IG T + EF
Sbjct: 48 PLDGQFLAVKANIDIQGLRSHSGSRLYRPE--PAQSDAPIVARMRAAGLIVIGHTNMSEF 105
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
AF G N H+GTP N +PGGSSSGSA AVA L D ALGTDT G VR+PA+ G
Sbjct: 106 AFSGLGLNPHFGTPPNALRQDLVPGGSSSGSATAVALGLADLALGTDTSGSVRIPAACQG 165
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
I+G+RPS G IG+ P + SLDT G LAR + + LL + + +R+I
Sbjct: 166 IIGFRPSIGRYDDIGIFPLAPSLDTPGPLARRVESIRSLDS-LLTRDRNPGQNCKRIICL 224
Query: 252 DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENG 311
D+ P++ ++ I +E L+ + + A R +G
Sbjct: 225 DEKSLDDYAPEIGAMYRI--VVEQLADTEFDLEVRTIHSFA---------RVNDLFHTHG 273
Query: 312 TATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVR 371
T L E + + V++ L V +R+ + + +N++ L R
Sbjct: 274 T------------LVGAEAYRLLKNVVQADHIALDPRVRDRLSHSATISDENMRTLLAAR 321
Query: 372 NEMRAALQRLLKDDKILVIPTVSDPPLKLNT---KKTYSAEFHDRTLVLSSIGSMSGCCQ 428
M + L+ +L+ PT+ PP + T A + L +S +
Sbjct: 322 RMMIETFEAELQ-GGMLLYPTLPSPPPSIQDVIGDPTIFARENAHILSVSMKAAFLNAPT 380
Query: 429 VAIPIGKYNEHPISISFITYHGGDKFLLDTVLDL 462
+ +P+G S+S + G DK LL T + L
Sbjct: 381 ITLPVGS-GVPGCSLSLTSSTGADKDLLTTAVRL 413
>gi|421561436|ref|ZP_16007283.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM2657]
gi|254670551|emb|CBA06398.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Neisseria
meningitidis alpha153]
gi|402338367|gb|EJU73602.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis NM2657]
Length = 481
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 98/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL G +G+T +DEFA G T EN YG NP H+PGG
Sbjct: 92 -MLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNLEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQT 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>gi|306842156|ref|ZP_07474825.1| amidase [Brucella sp. BO2]
gi|306287743|gb|EFM59174.1| amidase [Brucella sp. BO2]
Length = 471
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 94/154 (61%), Gaps = 1/154 (0%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G +IKD+FDV G T GS +RD A AV+V L GA IGKT + EF
Sbjct: 78 PLDGRIVSIKDLFDVAGEPTLAGSV-VRRDAPPAGCDAVIVQRLRNAGAVIIGKTHMTEF 136
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
AF G N HYG P N P+ IPGGSSSG+AV+VA + A+G+DT G VR+PA+ G
Sbjct: 137 AFTPVGLNPHYGEPGNAIDPARIPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPAALNG 196
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNAS 225
++G++P+ + + G P + SLD+VG L R +
Sbjct: 197 LVGFKPTARRIPLEGAFPLAPSLDSVGPLTRTVA 230
>gi|421550849|ref|ZP_15996850.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 69166]
gi|433471350|ref|ZP_20428736.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 68094]
gi|433477800|ref|ZP_20435120.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 70012]
gi|433522070|ref|ZP_20478760.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 61103]
gi|433526297|ref|ZP_20482927.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 69096]
gi|433539134|ref|ZP_20495610.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 70030]
gi|402329386|gb|EJU64747.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 69166]
gi|432208202|gb|ELK64180.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 68094]
gi|432215465|gb|ELK71354.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 70012]
gi|432259141|gb|ELL14415.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 61103]
gi|432261061|gb|ELL16318.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 69096]
gi|432273496|gb|ELL28594.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 70030]
Length = 481
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 98/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL G +G+T +DEFA G T EN YG NP H+PGG
Sbjct: 92 -MLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNLEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQA 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>gi|301384870|ref|ZP_07233288.1| hypothetical protein PsyrptM_19645 [Pseudomonas syringae pv. tomato
Max13]
gi|302062330|ref|ZP_07253871.1| hypothetical protein PsyrptK_20261 [Pseudomonas syringae pv. tomato
K40]
Length = 457
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 95/154 (61%), Gaps = 3/154 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
P G+ A KD+FDV G VT G+ + + A A V LL + G +GKT L EF
Sbjct: 72 PFDGVPVAWKDLFDVAGCVTTAGA-TVRNNLSPALLDAPSVGLLARAGMVSLGKTNLSEF 130
Query: 132 AFGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A+ G N H+GTP+NP IPGGSSSGSAVAVAA +V A+GTDT G +R+PA+F
Sbjct: 131 AYSGLGLNPHFGTPINPMSDGSPRIPGGSSSGSAVAVAAGIVPIAMGTDTAGSIRIPAAF 190
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
G++G+R + S GV P + +LD+VG L R+
Sbjct: 191 NGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRS 224
>gi|213971106|ref|ZP_03399225.1| amidase family protein [Pseudomonas syringae pv. tomato T1]
gi|213924095|gb|EEB57671.1| amidase family protein [Pseudomonas syringae pv. tomato T1]
Length = 442
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 95/154 (61%), Gaps = 3/154 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
P G+ A KD+FDV G VT G+ + + A A V LL + G +GKT L EF
Sbjct: 57 PFDGVPVAWKDLFDVAGCVTTAGA-TVRNNLSPALLDAPSVGLLARAGMVSLGKTNLSEF 115
Query: 132 AFGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A+ G N H+GTP+NP IPGGSSSGSAVAVAA +V A+GTDT G +R+PA+F
Sbjct: 116 AYSGLGLNPHFGTPINPMSDGSPRIPGGSSSGSAVAVAAGIVPIAMGTDTAGSIRIPAAF 175
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
G++G+R + S GV P + +LD+VG L R+
Sbjct: 176 NGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRS 209
>gi|337266663|ref|YP_004610718.1| allophanate hydrolase [Mesorhizobium opportunistum WSM2075]
gi|336026973|gb|AEH86624.1| allophanate hydrolase [Mesorhizobium opportunistum WSM2075]
Length = 614
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 182/402 (45%), Gaps = 28/402 (6%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
A +PL G+ FA+KD DV G T P++ + E+ A VV L GA +GKT L
Sbjct: 63 ATKPLWGIPFAVKDNIDVAGMPTTAACPEYT---YWPEKDATVVARLKAAGALVVGKTNL 119
Query: 129 DEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPAS 188
D+FA G+ G + P N + +PGGSSSGSAVA A +V FALGTDT G R+PA
Sbjct: 120 DQFATGLVGVRTPWPIPRNAIDEALVPGGSSSGSAVATARGIVAFALGTDTAGSGRIPAG 179
Query: 189 FCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRL 248
I+G +P+ G +S GV+P ++LD V + A +RV V +A +P
Sbjct: 180 LNNIVGLKPTVGALSAAGVVPACRTLDCVSVFALTVDDAYRVFSVASARDAADP------ 233
Query: 249 IFADDIF--QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQST 306
++ DI L++ + T+ V +KA G M G + + S G R
Sbjct: 234 -YSRDIAVQPLARRQPVLTVGVPAKADLEFFG---DTAMQAGFEASLAMLSRLGCRLVEI 289
Query: 307 SPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAIN--TTQDNI 364
+ AT L +RY + E ++A + V +++ + D
Sbjct: 290 PFGDFYATANLLYEGAWVAERYAAIRDFMEANEAAL----HPVTRKIIGGARNLSAADAF 345
Query: 365 KILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYS--AEFHDRTLVLSSIGS 422
+ LY ++ +A L ++ + +PT P T + E + R ++ +
Sbjct: 346 RGLYALQ-AYKAKLAPVIASVDLFCVPTA---PTHYTTATVLADPVETNSRLGTYTNFVN 401
Query: 423 MSGCCQVAIPIGKYNEH-PISISFITYHGGDKFLLDTVLDLY 463
+ C +A+P GK + P+S++ + G D DL+
Sbjct: 402 LLDMCGIAVPTGKRGDGLPMSVTLLAPAGCDALTAMLARDLH 443
>gi|408393181|gb|EKJ72447.1| hypothetical protein FPSE_07328 [Fusarium pseudograminearum CS3096]
Length = 649
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 98/169 (57%), Gaps = 4/169 (2%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
+QPLAGL+ IKD+FD+KG T FG+ W TA+ V L+ GA +GK L
Sbjct: 169 KQPLAGLRIGIKDLFDMKGVKTSFGNKAWYDMSKVKTETAIAVQKLIDAGAVIVGKNKLS 228
Query: 130 EFAFG--ITGENKHYGTPVNPQMPSH-IPGGSSSGSAVAVAA-QLVDFALGTDTIGCVRV 185
EFAF E+ Y PVNP+ + P SS GSA AVA+ +D +LG+DT G +R
Sbjct: 229 EFAFAGMFVTEHIDYLLPVNPRGDGYQSPSDSSGGSAAAVASYDWLDASLGSDTGGSIRG 288
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL 234
PAS G+ G RP+ V++ G LP S S+DT G++ R+ + R+ VL
Sbjct: 289 PASTNGVHGGRPTQDAVNLTGALPLSVSMDTAGIIVRDPRMWARINKVL 337
>gi|433469549|ref|ZP_20426970.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 98080]
gi|432203819|gb|ELK59869.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 98080]
Length = 481
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 98/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL G +G+T +DEFA G T EN YG NP H+PGG
Sbjct: 92 -MLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNLEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQT 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>gi|404379044|ref|ZP_10984115.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Simonsiella muelleri
ATCC 29453]
gi|294483394|gb|EFG31079.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Simonsiella muelleri
ATCC 29453]
Length = 482
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 89/152 (58%), Gaps = 2/152 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A KD+F G+ T S D+ A TA VV LL G +G+T +DEFA
Sbjct: 68 LTGVPIAFKDIFCHTGWRTACASK--MLDNFVAPYTATVVQNLLDAGMVTLGRTNMDEFA 125
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G T EN +YG NP H+ GGSS GSAV VAA+L ALG+DT G +R PAS CGI
Sbjct: 126 MGSTNENSYYGAAKNPFNHHHVTGGSSGGSAVVVAARLAPVALGSDTGGSIRQPASHCGI 185
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
G +P++G VS G++ + S D G +A+ A
Sbjct: 186 TGLKPTYGVVSRFGMIAYASSFDQAGPMAQTA 217
>gi|386397044|ref|ZP_10081822.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Bradyrhizobium sp. WSM1253]
gi|385737670|gb|EIG57866.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Bradyrhizobium sp. WSM1253]
Length = 468
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/233 (37%), Positives = 119/233 (51%), Gaps = 15/233 (6%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
A+ PL G+ F +KD DV GY T G P++ + ER A VV LL+ GA + K L
Sbjct: 75 AKMPLYGVPFVVKDNIDVVGYDTTAGCPEYA---YRPERNAFVVDRLLEAGAILVAKANL 131
Query: 129 DEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPAS 188
D+FA G+TG YG P NP HI GGSSSGS VA+A + F+LGTDT G R+PA
Sbjct: 132 DQFATGLTGMRSVYGFPQNPYSADHIVGGSSSGSGVAIACKTAHFSLGTDTAGSGRIPAG 191
Query: 189 FCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRL 248
F GI G+RPS G +S GV+P+ + LD+ + R L V +A +P
Sbjct: 192 FLGIYGFRPSGGVLSNTGVVPSGRMLDSCSVFCRWPDDLRLVMSAAGVYDAADP------ 245
Query: 249 IFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGL 301
F+ ++ K K + +I E G + A+ + L+GL
Sbjct: 246 -FSKEVLGRRKAFKDPVVGIIDPKEEYFLG-----DAEAKRVYAAGIERLRGL 292
>gi|374340234|ref|YP_005096970.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase
subunit A [Marinitoga piezophila KA3]
gi|372101768|gb|AEX85672.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A
subunit [Marinitoga piezophila KA3]
Length = 448
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 170/371 (45%), Gaps = 36/371 (9%)
Query: 101 DHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSS 160
+++ + TA + LL G +GKT LDEFA G + EN +G NP IPGGSS
Sbjct: 61 ENYNSTYTATAIQKLLNEGFKIVGKTNLDEFAMGGSNENSAFGPVKNPWDLERIPGGSSG 120
Query: 161 GSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLL 220
GSA VAA +V FA+G+DT G VR PASFCGI+GY+P++G +S G+ + SLD +G+L
Sbjct: 121 GSAAVVAAGIVPFAIGSDTGGSVRQPASFCGIVGYKPTYGAISRYGLSAFASSLDQIGVL 180
Query: 221 ARNASILHRVGHVL----------LQLN-------AVEPRRARRLIFADDIFQLSKVPKL 263
A N V V+ L +N EP + ++ ++F++ +
Sbjct: 181 ATNVKDAATVVEVMSGKDEKDSTTLDINWDLTSEIEKEPEKI-KIAIPKEVFEVEGIDP- 238
Query: 264 KTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRA--QSTSPENGTATLKALSSV 321
K + + IE L N + +P LK + +P ++ L +
Sbjct: 239 KVLEKFKENIERL-------KENGIEIEEVEIPHLKYTVSIYYIIAPSEASSNLSRYDGM 291
Query: 322 MLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILY-----KVRNEMRA 376
+L R E +++ + ++++ G V R+ T Y K+R +
Sbjct: 292 RFAL-REEKESLKDTYMETRDKGFGIEVKRRIFMGAFTLSSAYYDAYFSKAAKIRKLLND 350
Query: 377 ALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKY 436
+++ + ++ PT + P K+ K+ E++ L S +M G ++IP G
Sbjct: 351 DFEKVFEKYDAVLTPTTTMLPPKIGELKS-PLEYYLMDLFTIS-ANMIGAPAISIPSGLI 408
Query: 437 NEHPISISFIT 447
+ P I I+
Sbjct: 409 DNLPFGIHLIS 419
>gi|416213152|ref|ZP_11622136.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis M01-240013]
gi|325144510|gb|EGC66809.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis M01-240013]
Length = 481
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 98/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL G +G+T +DEFA G T EN YG NP H+PGG
Sbjct: 92 -MLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNLEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQA 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>gi|416161289|ref|ZP_11606348.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis N1568]
gi|433473749|ref|ZP_20431110.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 97021]
gi|433482311|ref|ZP_20439570.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 2006087]
gi|433484294|ref|ZP_20441519.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 2002038]
gi|433486563|ref|ZP_20443758.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 97014]
gi|325128454|gb|EGC51335.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
meningitidis N1568]
gi|432210047|gb|ELK66013.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 97021]
gi|432215561|gb|ELK71448.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 2006087]
gi|432220392|gb|ELK76213.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 2002038]
gi|432221848|gb|ELK77652.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria meningitidis 97014]
Length = 481
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 98/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITIDQDKTLAEARAADKRIAQGNASALTGVPVAYKDIFCQTGWRSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL G +G+T +DEFA G T EN YG NP H+PGG
Sbjct: 92 -MLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNLEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQT 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>gi|332797954|ref|YP_004459454.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acidianus
hospitalis W1]
gi|332695689|gb|AEE95156.1| aspartyl/glutamyl-tRNA amidotransferase subunit A, GatA [Acidianus
hospitalis W1]
Length = 393
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 181/409 (44%), Gaps = 58/409 (14%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L GL F IKD+ KG T GS K + R A +V +L+ G T +GKT EFA
Sbjct: 27 LKGLTFGIKDIILTKGIKTTAGSKILK--DYIPNRNAWIVDKILEEGGTIVGKTNTHEFA 84
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G T + G NP P I GGSS GSAVAVA ++VD +GTDT G +R+PAS CG+
Sbjct: 85 IGATNTSSIAGPARNPYDPERISGGSSGGSAVAVALKMVDVGVGTDTGGSIRIPASLCGV 144
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRV---------GHVLLQLNAVEPR 243
+G++P+ G + + GV+P S +LDT+G + R+ L RV HVL+ PR
Sbjct: 145 IGFKPTTGIIPIDGVIPFSWTLDTIGFITRDIPTLRRVLDAVIPIENKHVLVSKVRTRPR 204
Query: 244 RARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQN--PEHMNVGQYIASNVPSLKGL 301
+F DD S LK+I + LS Y + +N + SNV
Sbjct: 205 LG-VFLFKDDPASNS----LKSI------LNKLSSYFDLIDLRLNFLEGFGSNV------ 247
Query: 302 RAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQ 361
GT L SS + +W++S +V E +++ +
Sbjct: 248 --------RGTIALAEGSSY------------HRDWIESTPGMYFPDVKELLMQGLQIRA 287
Query: 362 DNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIG 421
+ + R + R ++ PT P K++ E+ + + +
Sbjct: 288 IDYIDALRARRVIFEEYVRAFDSVDAIISPTTKIPAPKISEVVGREKEYRKLLVSNTELF 347
Query: 422 SMSGCCQVAIPIGKYNEHPIS--ISFITYHGGDKFLLDTVLDLYDSLQE 468
++ +++P+ K N+ PI +S + Y G +LD+ + + E
Sbjct: 348 NLVNAPSISLPVSKVNDLPIGLMVSGLPYEDG------IILDIAEKILE 390
>gi|395786650|ref|ZP_10466377.1| hypothetical protein ME5_01695 [Bartonella tamiae Th239]
gi|423716456|ref|ZP_17690646.1| hypothetical protein MEG_00186 [Bartonella tamiae Th307]
gi|395422948|gb|EJF89144.1| hypothetical protein ME5_01695 [Bartonella tamiae Th239]
gi|395429385|gb|EJF95453.1| hypothetical protein MEG_00186 [Bartonella tamiae Th307]
Length = 445
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 92/152 (60%), Gaps = 1/152 (0%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
P G+ A KD+FDV G +T G+ + +A+ A VV L + G CIGKT L EF
Sbjct: 62 PFDGVPIAYKDLFDVAGTLTTAGAATCLK-APKAQNDASVVAKLAQFGMVCIGKTNLTEF 120
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+ G NK++GTP N +IPGGS SG+AV VA +V + GTDT G + +PA F G
Sbjct: 121 AYSGLGLNKYFGTPSNACDEDYIPGGSLSGAAVCVAKNIVPLSFGTDTAGSICIPACFNG 180
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
++GYR S + GV P + SLDT+G LA++
Sbjct: 181 VIGYRSSMKRYAQQGVYPLASSLDTIGPLAKS 212
>gi|294055598|ref|YP_003549256.1| allophanate hydrolase [Coraliomargarita akajimensis DSM 45221]
gi|293614931|gb|ADE55086.1| allophanate hydrolase [Coraliomargarita akajimensis DSM 45221]
Length = 574
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 92/153 (60%), Gaps = 3/153 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ FAIKD D+ T + + E +A VV LL+ GA +GKT LD+F
Sbjct: 65 PLYGIPFAIKDNIDLACVPTTAACEAY---GYTPELSAPVVEKLLQAGAIPMGKTNLDQF 121
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G+ G YG P NP P +PGGSSSGSAVA++ LV F+LGTDT G RVPA F
Sbjct: 122 ATGLVGVRSPYGVPRNPIAPDRVPGGSSSGSAVALSEGLVSFSLGTDTAGSGRVPAMFNK 181
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
+ G +PS G +S GV+P ++LD V + A NA
Sbjct: 182 LWGLKPSRGRLSTSGVVPACRTLDCVSIFALNA 214
>gi|294627516|ref|ZP_06706099.1| amidase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122]
gi|292598147|gb|EFF42301.1| amidase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122]
Length = 486
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/163 (50%), Positives = 100/163 (61%), Gaps = 3/163 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDH-HEAERTAVVVTLLLKNGATCIGKTVLDEF 131
LAG+ F +KD+FDV G VT G+ R H A R A VV L + GA +G +DEF
Sbjct: 108 LAGVPFVVKDLFDVAGQVTTAGA--AVRAHCPPASRDAAVVQRLGEAGAVLVGTANMDEF 165
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+G N HYGT NP H+ GGSS GSA AVAA LV FALG+DT G +RVPA+ CG
Sbjct: 166 AYGFATVNAHYGTTANPHDDQHLAGGSSGGSAAAVAAGLVPFALGSDTNGSIRVPAALCG 225
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL 234
I G RP+HG V + GV P +LD VG A + + L RV VL
Sbjct: 226 IYGLRPTHGAVPLDGVFPFVDALDVVGPFATSVADLRRVYDVL 268
>gi|295700687|ref|YP_003608580.1| amidase [Burkholderia sp. CCGE1002]
gi|295439900|gb|ADG19069.1| Amidase [Burkholderia sp. CCGE1002]
Length = 380
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 117/360 (32%), Positives = 162/360 (45%), Gaps = 49/360 (13%)
Query: 49 FGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERT 108
AFL+ F L P AIKD D+ GY T S D A
Sbjct: 1 MSAFLQTFNLSATDNADAP---------TIAIKDSIDIAGYATTAASRALA-DAPPAAEH 50
Query: 109 AVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAA 168
A VV LL G +GKT + E AFG+TG N GTPVNPQ + IPGGSSSGSA AV
Sbjct: 51 AAVVQRLLDAGWRIVGKTNMHELAFGMTGINDFSGTPVNPQDATRIPGGSSSGSASAVGQ 110
Query: 169 QLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILH 228
+LVD ALGTDT G VR PA+ CG++G +P+ G VS GV P +LD VG R L
Sbjct: 111 KLVDAALGTDTGGSVRGPAACCGVIGLKPTFGRVSRHGVAPRVTTLDCVGPFTREMDTLV 170
Query: 229 RVGHVLLQLNAVEPR----RARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEH 284
RV + A++P ARR D+ QL + V++
Sbjct: 171 RV------MTAIDPSFRTDDARR-----DVSQLR-------VGVVA-------------- 198
Query: 285 MNVGQYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPR 344
++ I + + ++ P A+ K + L++ E + V+S K
Sbjct: 199 VDADDDITKAIAAAVAQAGLASQPVE-LASFKDAFTAGLAVINAETARAFGHLVESGK-- 255
Query: 345 LGYNVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKK 404
LG ++ R+ A T+ ++ +VR + R L +LV+PT+ P+ L +
Sbjct: 256 LGADIDARLRAAATTSAADLDAAERVRQVFTDEVDRALDHVDVLVLPTMPSLPITLEAAR 315
>gi|395799160|ref|ZP_10478442.1| hypothetical protein A462_27878 [Pseudomonas sp. Ag1]
gi|395336847|gb|EJF68706.1| hypothetical protein A462_27878 [Pseudomonas sp. Ag1]
Length = 441
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 98/160 (61%), Gaps = 6/160 (3%)
Query: 69 ARQPLA---GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGK 125
A QPL+ G+ A KD+FDV G +T G+ ++R+ A A V LL + G +GK
Sbjct: 51 AGQPLSVFDGVPLAWKDLFDVAGSITTAGAA-YRRNAPAALLDAPSVGLLCRAGMVSVGK 109
Query: 126 TVLDEFAFGITGENKHYGTPVNPQMPSH--IPGGSSSGSAVAVAAQLVDFALGTDTIGCV 183
T L E A+ G N H+GTP NP IPGGSSSGSAVAVAA +V A+GTDT G +
Sbjct: 110 TNLSELAYSGLGLNPHFGTPHNPASVDQPRIPGGSSSGSAVAVAAGIVPIAMGTDTAGSI 169
Query: 184 RVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
R+PA+ G++GYR S S GV P + +LD++G L R+
Sbjct: 170 RIPAALNGVVGYRSSCRRYSRDGVFPLAHTLDSLGPLTRS 209
>gi|294667814|ref|ZP_06733024.1| amidase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535]
gi|292602440|gb|EFF45881.1| amidase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535]
Length = 469
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/163 (50%), Positives = 100/163 (61%), Gaps = 3/163 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDH-HEAERTAVVVTLLLKNGATCIGKTVLDEF 131
LAG+ F +KD+FDV G VT G+ R H A R A VV L + GA +G +DEF
Sbjct: 108 LAGVPFVVKDLFDVAGQVTTAGAA--VRAHCPPASRDAAVVQRLGEAGAVLVGTANMDEF 165
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+G N HYGT NP H+ GGSS GSA AVAA LV FALG+DT G +RVPA+ CG
Sbjct: 166 AYGFATVNAHYGTTANPHDDQHLAGGSSGGSAAAVAAGLVPFALGSDTNGSIRVPAALCG 225
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL 234
I G RP+HG V + GV P +LD VG A + + L RV VL
Sbjct: 226 IYGLRPTHGAVPLDGVFPFVDALDVVGPFATSVADLRRVYDVL 268
>gi|325914412|ref|ZP_08176759.1| amidohydrolase, AtzE family [Xanthomonas vesicatoria ATCC 35937]
gi|325539420|gb|EGD11069.1| amidohydrolase, AtzE family [Xanthomonas vesicatoria ATCC 35937]
Length = 486
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 118/396 (29%), Positives = 172/396 (43%), Gaps = 50/396 (12%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAG+ F +KD+FDV G VT G+ + A R A VV L GA +G +DEFA
Sbjct: 108 LAGVPFVVKDLFDVAGQVTTAGA-AIRAQCAPATRDAAVVQRLCDAGAVLVGTANMDEFA 166
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+G N HYGT NP H+ GGSS GSA AVAA LV FALG+DT G +RVPA+ CG+
Sbjct: 167 YGFATVNAHYGTTANPHDHRHLAGGSSGGSAAAVAAGLVPFALGSDTNGSIRVPAALCGV 226
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRV-----GHVLLQLNAVEPRRARR 247
G RP+HG + + GV P +LD VG A + + + RV GH L N R AR
Sbjct: 227 YGLRPTHGALPLEGVFPFVDALDVVGPFATSVADVRRVYEVMHGHALHSCNVANLRIAR- 285
Query: 248 LIFADDIFQLSKVPKLKT-IHVISKAIESLSGYQNP--EHMNVGQYIASNVPSLKGLRAQ 304
FQ + P+L I + A S + + P E ++
Sbjct: 286 ---LGGWFQRNLDPELDAGIGALLAACHSTTLIELPQAERARAAAFVL------------ 330
Query: 305 STSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNI 364
T+ E G R T +++ + + +R+L + +
Sbjct: 331 -TAAEGG------------HRHRAALGTHGDQFDPATR--------DRLLAGLQLPASAV 369
Query: 365 KILYKVRNEMRAALQRLLKDDKILVIPTVS--DPPLKLNTKKTYSAEFHDRT--LVLSSI 420
+ RAA+Q+L D +L+ P P + +T R + +
Sbjct: 370 ADARRFAQWFRAAMQQLWDDVDVLIAPATPCVAPRIDQDTIVIDGLPVSARANLGIFTQP 429
Query: 421 GSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
++GC +A P+ + P+ + I G + L
Sbjct: 430 LGLAGCPVLAAPLPRPGRLPLGVQLIAAPGREDRLF 465
>gi|422303654|ref|ZP_16391005.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 9806]
gi|389791410|emb|CCI12836.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 9806]
Length = 438
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 116/198 (58%), Gaps = 10/198 (5%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ FA+K++FD+KG VT GS RDH A + A+ + L GA +G T +DE+
Sbjct: 67 PLAGVPFAVKNLFDIKGIVTLAGS-KINRDHPAAGQDAIAIQTLEAVGAVLVGATNMDEY 125
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+G EN HYG NP+ PS + GGSS GSA AVAA LV ALG+DT G VRVPA+ CG
Sbjct: 126 AYGFVTENAHYGATPNPRDPSRVSGGSSGGSAAAVAANLVPLALGSDTNGSVRVPAACCG 185
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ------LNAVEPRRA 245
++G +P+ G VS G+ SLD G + N + + + + + LN +E
Sbjct: 186 VVGLKPTFGRVSRQGLFLFVSSLDHPGFFSGNVADMAAIWSLFAKNNLKASLNGLE---G 242
Query: 246 RRLIFADDIFQLSKVPKL 263
++ ADD FQ P++
Sbjct: 243 VKIALADDYFQQGAEPEV 260
>gi|302132260|ref|ZP_07258250.1| hypothetical protein PsyrptN_12753 [Pseudomonas syringae pv. tomato
NCPPB 1108]
Length = 457
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 95/154 (61%), Gaps = 3/154 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
P G+ A KD+FDV G VT G+ + + A A V LL + G +GKT L EF
Sbjct: 72 PFDGVPVAWKDLFDVAGCVTTAGA-TVRNNLSPALLDAPSVGLLARAGMVSLGKTNLSEF 130
Query: 132 AFGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A+ G N H+GTP+NP IPGGSSSGSAVAVAA +V A+GTDT G +R+PA+F
Sbjct: 131 AYSGLGLNPHFGTPINPMSDGSPRIPGGSSSGSAVAVAAGIVPIAMGTDTAGSIRIPAAF 190
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
G++G+R + S GV P + +LD+VG L R+
Sbjct: 191 NGLVGFRSTTRRYSRDGVFPLALTLDSVGPLTRS 224
>gi|163759846|ref|ZP_02166930.1| Amidase [Hoeflea phototrophica DFL-43]
gi|162282804|gb|EDQ33091.1| Amidase [Hoeflea phototrophica DFL-43]
Length = 534
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 102/178 (57%), Gaps = 5/178 (2%)
Query: 66 PPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGK 125
P A R LAG +A KD+F +GY G+ +K A+ T+ V+ L G IG+
Sbjct: 128 PSAERGILAGAPYARKDLFKREGYRAENGALIFK--GQIADNTSTVIERLDAAGGIDIGR 185
Query: 126 TVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
+ E A TG N H P NP P+H+ GGSSSGSAVAVAA V FALGTDT G +R
Sbjct: 186 LAMAELAMSPTGFNAHTKHPRNPWNPAHVTGGSSSGSAVAVAAGYVRFALGTDTGGSIRH 245
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPR 243
PA+ G+ G +P+ VS GV P S SLD VG LAR+A G VL ++ ++PR
Sbjct: 246 PAAMSGLTGIKPTANRVSRAGVWPLSWSLDCVGPLARSA---RDCGLVLDLISGLDPR 300
>gi|383769955|ref|YP_005449018.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Bradyrhizobium sp. S23321]
gi|381358076|dbj|BAL74906.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Bradyrhizobium sp. S23321]
Length = 451
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 96/165 (58%), Gaps = 3/165 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL GL F++KD DV G T P++ + A+ T+ VV + GA +GKT +D+F
Sbjct: 66 PLYGLVFSVKDCIDVAGEQTTSACPEFA---YVAKDTSPVVADAIAAGAIYVGKTNMDQF 122
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G+ G YG NP P +IPGGSSSG+AV+VA FA GTDT G RVPAS+CG
Sbjct: 123 ATGLVGVRSPYGIARNPHNPDYIPGGSSSGAAVSVATGTSSFAFGTDTGGSGRVPASYCG 182
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ 236
+ G++P+ G S G++ +S DT+ L + + + VL +
Sbjct: 183 VTGFKPAPGAFSQRGMVYACRSFDTISLYTQQPDDAYDIYRVLAR 227
>gi|357386734|ref|YP_004901458.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase
[Pelagibacterium halotolerans B2]
gi|351595371|gb|AEQ53708.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase
[Pelagibacterium halotolerans B2]
Length = 436
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 97/177 (54%), Gaps = 2/177 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ +IKD+FD KG VT GS D A A V L GA G+T + EF
Sbjct: 66 PLAGILVSIKDLFDEKGQVTSAGSTILA-DAEPANADAEAVGRLRAAGAIGCGRTTMSEF 124
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+ G N H+G P N S I GGS+SG A++VA + D ALG+DT G VR+PA+ G
Sbjct: 125 AYSGVGLNPHFGNPGNIFDSSRISGGSTSGGALSVALGIADVALGSDTGGSVRIPAALNG 184
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRL 248
+ G++PS V + G P SQS D++G LAR V H +L A P + L
Sbjct: 185 LCGFKPSQSAVPLDGAFPLSQSYDSIGPLARTIKHCSAV-HAVLSATAASPAKRESL 240
>gi|296314452|ref|ZP_06864393.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
polysaccharea ATCC 43768]
gi|296838741|gb|EFH22679.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
polysaccharea ATCC 43768]
Length = 481
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 98/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPTLNGYITIDQDKTLAEARAADERIAQGNGSVLTGVPVAYKDIFCQTGWRSACSSK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL G +G+T +DEFA G T EN YG NP H+PGG
Sbjct: 92 -MLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNLEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQA 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>gi|254502596|ref|ZP_05114747.1| Amidase, putative [Labrenzia alexandrii DFL-11]
gi|222438667|gb|EEE45346.1| Amidase, putative [Labrenzia alexandrii DFL-11]
Length = 456
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 100/180 (55%), Gaps = 3/180 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG ++K +FDV G VT + K + A A + L GA G T + EF
Sbjct: 85 PLAGALVSVKALFDVAGEVTTSATTVLK-NSPPATEDAPAIARLDAAGAVFTGLTNMSEF 143
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+ G N HYGTP N P PGGS+SG AVAVA L D A+G+DT G +R+PA+F G
Sbjct: 144 AYSGLGLNPHYGTPENALYPGCAPGGSTSGGAVAVALGLCDIAIGSDTGGSLRIPAAFNG 203
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAV--EPRRARRLI 249
I G++P+ TVSM G P S SLD+ G +A+ + V+ + EP+ AR ++
Sbjct: 204 ITGFKPTQSTVSMAGGRPLSDSLDSFGPMAKTVAECELTWQVMAGRETIPEEPKAARLVV 263
>gi|365880052|ref|ZP_09419438.1| putative Glu-tRNA amidotransferase [Bradyrhizobium sp. ORS 375]
gi|365291934|emb|CCD91969.1| putative Glu-tRNA amidotransferase [Bradyrhizobium sp. ORS 375]
Length = 450
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 121/405 (29%), Positives = 196/405 (48%), Gaps = 47/405 (11%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA P AG+ +IKD+FD+KG VT GS + D A+ A V L K G IG+T
Sbjct: 67 AAPSPYAGIPVSIKDLFDIKGQVTRAGSRALE-DSAPADADAPAVARLRKAGFVVIGRTN 125
Query: 128 LDEFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
+ EFA+ G N HYGTP + + ++PGGSSSG+AV+V ++ ALGTDT G R+
Sbjct: 126 MTEFAYSGIGINPHYGTPKSAWKRDVGYVPGGSSSGAAVSVVDRMAYGALGTDTGGSCRI 185
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL----LQLNAVE 241
PA+F GI GY+P+ V + G +P S +LD+ G LA + + VL ++
Sbjct: 186 PAAFNGITGYKPTQSRVPLDGGVPLSTTLDSFGPLANTVACCAVLDSVLADEPIRPLVAR 245
Query: 242 PRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLS-------GYQNPEHMNVGQYIASN 294
P + RL + L ++ + +A+E+L+ + PE ++VG
Sbjct: 246 PVKGLRLAVPTTVV-LDEL-DAEVAQTFERALETLARQGALIERIEFPEFLDVG------ 297
Query: 295 VPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVL 354
+ +KG A + S A +L+ + +Y+ PR+ +
Sbjct: 298 IIGIKGGFAAAES--------YAWHRFLLTAK----GDVYD-------PRVSVRIARG-- 336
Query: 355 EAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHD-- 412
EAI T D I++L R+ ++ A R+ D LV+PT ++ P K+ +A +
Sbjct: 337 EAI-TVPDYIEMLNARRSLVKRAAARIAPYDA-LVMPTTANAPPKIADLADDAAFARENI 394
Query: 413 RTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
R+L + +M C +++P ++ E P+ + D+ LL+
Sbjct: 395 RSLRNCTFINMIDGCAISLPAHRHGEVPVGLMLAQSGVQDRKLLE 439
>gi|440224690|ref|YP_007338086.1| putative amidase [Rhizobium tropici CIAT 899]
gi|440043562|gb|AGB75540.1| putative amidase [Rhizobium tropici CIAT 899]
Length = 461
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/158 (48%), Positives = 97/158 (61%), Gaps = 5/158 (3%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
+R L G+ A KD+F + G T GS A+ A VV L G +G+ +
Sbjct: 68 SRGLLDGIPVAWKDLFAIAGLPTTAGSIVLAD-AAPAQDDADVVRALQAAGMVAVGRVNM 126
Query: 129 DEFAFGITGENKHYGTPVNP---QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
EFAF G N HYGTP+NP +P IPGGSSSGSAVAVAA LV A+GTDT G VR+
Sbjct: 127 SEFAFSGIGLNPHYGTPLNPLATDVP-RIPGGSSSGSAVAVAAGLVPVAIGTDTGGSVRI 185
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
P++F G++GY+ SHG SM GV P S SLD++G L R+
Sbjct: 186 PSAFNGLVGYKASHGRYSMAGVFPLSTSLDSLGPLCRS 223
>gi|220936247|ref|YP_002515146.1| allophanate hydrolase [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|219997557|gb|ACL74159.1| allophanate hydrolase [Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 614
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/168 (44%), Positives = 98/168 (58%), Gaps = 3/168 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ FAIKD D+ G T P + + E +A VV L++ GA IGKT LD+F
Sbjct: 69 PLYGIPFAIKDNIDLAGVPTTAACPAFA---YTPEHSAFVVERLIEAGALPIGKTNLDQF 125
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G+ G YG N P++I GGSS+GSAV VA +V F+LGTDT G RVPA+F
Sbjct: 126 ATGLVGTRSPYGACANAFDPAYISGGSSAGSAVTVATGVVSFSLGTDTAGSGRVPAAFNN 185
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNA 239
++G +P+ G +S GV+P +SLDTV + A RV V +A
Sbjct: 186 LIGVKPTRGLLSASGVVPACRSLDTVSIFALTVPDAERVLAVTAAFDA 233
>gi|91783714|ref|YP_558920.1| Asp-tRNA Asn/Glu-tRNAGln amidotransferase A subunit [Burkholderia
xenovorans LB400]
gi|91687668|gb|ABE30868.1| Putative Asp-tRNA Asn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia xenovorans LB400]
Length = 374
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/338 (33%), Positives = 155/338 (45%), Gaps = 44/338 (13%)
Query: 74 AGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAF 133
+G AIKD D+ GY T S D A R A VV LL G +GKT + E AF
Sbjct: 13 SGPSIAIKDTIDIAGYPTTAASRALA-DTPPARRHAQVVERLLAAGWHIVGKTNMHELAF 71
Query: 134 GITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGIL 193
G+TG N + GTP NPQ + IPGGSSSGSA AV +L D ALGTDT G +R PA+ CG++
Sbjct: 72 GMTGINDYTGTPQNPQDATRIPGGSSSGSAAAVGLKLADAALGTDTGGSIRGPAACCGVI 131
Query: 194 GYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADD 253
G +P+ G VS +GV P +LD VG AR+ +L A I AD
Sbjct: 132 GLKPTFGRVSRLGVAPRESTLDCVGPFARDMRML---------------AAAMLAITAD- 175
Query: 254 IFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTA 313
F + + +Q P VG A + A++ N TA
Sbjct: 176 -FDAN----------------AAHAWQGP--CKVGIVQADATADILAAVARAADTANCTA 216
Query: 314 ------TLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
L A L++ E + V K +G ++ R+ A NTT +
Sbjct: 217 HTLQLTGLAAAFDAGLTVINAETSRAFGHLVAGGK--IGADLDARLRAAANTTAAQVDAA 274
Query: 368 YKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKT 405
+VR + AA+ L + +L++PT+ P+ L ++
Sbjct: 275 EQVRRQFTAAIDHALDNADVLILPTLPALPITLEEARS 312
>gi|347532293|ref|YP_004839056.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Roseburia hominis
A2-183]
gi|345502441|gb|AEN97124.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Roseburia hominis
A2-183]
Length = 483
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 96/170 (56%), Gaps = 20/170 (11%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGS-------PDWKRDHHEAERTAVVVTLLLKNGATCIG 124
PLAG+ AIKD KG +T S P + TA V L K GA +G
Sbjct: 67 PLAGVPVAIKDNMCTKGLLTTCSSKILYNFVPTY---------TAEAVLNLEKAGAVILG 117
Query: 125 KTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVR 184
KT +DEFA G T E YG NP H+PGGSS GS AVAA+ +ALG+DT G +R
Sbjct: 118 KTNMDEFAMGSTTETSAYGVTKNPWNTGHVPGGSSGGSCAAVAAEECSYALGSDTGGSIR 177
Query: 185 VPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN----ASILHRV 230
P+SFCG+ G +P++GTVS G++ SLD +G +A++ A+IL +
Sbjct: 178 QPSSFCGVTGIKPTYGTVSRYGLIAYGSSLDQIGPIAKDVTDCATILEAI 227
>gi|430746988|ref|YP_007206117.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase
subunit A [Singulisphaera acidiphila DSM 18658]
gi|430018708|gb|AGA30422.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A
subunit [Singulisphaera acidiphila DSM 18658]
Length = 497
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 94/162 (58%), Gaps = 5/162 (3%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL GL AIKDV V G T GS ++ A V+ L GA GKT +DEF
Sbjct: 69 PLGGLPVAIKDVLCVNGEPTTCGS--RMLENFRPPYDATVIARLKSAGAILFGKTNMDEF 126
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G + EN YG NP IPGGSS GSAVA+AA L +LGTDT G +R PA+ CG
Sbjct: 127 AMGSSTENSAYGPTRNPWDEERIPGGSSGGSAVAIAADLAPLSLGTDTGGSIRQPAALCG 186
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLAR---NASILHRV 230
++G +P++G VS G++ + SLD VG A +A++L +V
Sbjct: 187 VVGLKPTYGRVSRYGLIAYASSLDQVGPFAHDLADAALLLKV 228
>gi|323484766|ref|ZP_08090123.1| hypothetical protein HMPREF9474_01874 [Clostridium symbiosum
WAL-14163]
gi|323691835|ref|ZP_08106091.1| hypothetical protein HMPREF9475_00953 [Clostridium symbiosum
WAL-14673]
gi|355627783|ref|ZP_09049414.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Clostridium sp.
7_3_54FAA]
gi|323401872|gb|EGA94213.1| hypothetical protein HMPREF9474_01874 [Clostridium symbiosum
WAL-14163]
gi|323504117|gb|EGB19923.1| hypothetical protein HMPREF9475_00953 [Clostridium symbiosum
WAL-14673]
gi|354820108|gb|EHF04534.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Clostridium sp.
7_3_54FAA]
Length = 494
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 109/218 (50%), Gaps = 33/218 (15%)
Query: 24 SVVGFVVLAETLRRRRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDV 83
+V F+ L E + ++ R+D G PLAG+ A+KD
Sbjct: 39 TVHAFITLEEEKALKNAEEVQARIDAGVL-----------------SGPLAGVPMAVKDN 81
Query: 84 FDVKGYVTGFGS-------PDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGIT 136
+G T GS P + +A VT L K GA +GKT +DEFA G T
Sbjct: 82 ICTEGMKTTCGSRILYNFVPAY---------SAQAVTNLKKAGAVIVGKTNMDEFAMGST 132
Query: 137 GENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYR 196
E +G NP H+PGGSS GS AVA+ V +ALG+DT G +R P+SFCG+ G +
Sbjct: 133 TETSWFGPTANPWNKKHVPGGSSGGSCAAVASGEVFYALGSDTGGSIRQPSSFCGVTGIK 192
Query: 197 PSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL 234
P++GTVS G++ SLD +G +AR+ + V +L
Sbjct: 193 PTYGTVSRYGLIAYGSSLDQIGPVARDTADCAAVLEIL 230
>gi|187479140|ref|YP_787165.1| amidase [Bordetella avium 197N]
gi|115423727|emb|CAJ50277.1| putative amidase [Bordetella avium 197N]
Length = 442
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 92/149 (61%), Gaps = 1/149 (0%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAGL +IKD+FDV+G V+ GS A + A VV L + GA +G+T + EFA
Sbjct: 68 LAGLPISIKDLFDVQGQVSTAGSRALD-GAAPAVQDAPVVARLRQAGAILLGRTNMSEFA 126
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
F G N HYGTP P + I GGS+SG AV VA + ALGTDT G +R+P++FCG+
Sbjct: 127 FSGLGLNPHYGTPRAPHDENRIAGGSTSGGAVTVARGMAVAALGTDTGGSIRIPSAFCGL 186
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLA 221
G++P+ V G +P S SLD++G LA
Sbjct: 187 TGFKPTASRVPRTGAVPLSSSLDSIGPLA 215
>gi|288960643|ref|YP_003450983.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Azospirillum sp. B510]
gi|288912951|dbj|BAI74439.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Azospirillum sp. B510]
Length = 469
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 90/152 (59%), Gaps = 1/152 (0%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ A+K++FD+ G T GS RD A AV++ L GA +G + E+
Sbjct: 72 PLAGVPVAVKNLFDIGGLPTRAGS-RINRDRPPATADAVLLRRLTAAGAVLVGGLNMGEY 130
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+ TGEN H G NP PS + GGSSSG A AA L +LG+DT G +RVP+SFCG
Sbjct: 131 AYDFTGENAHDGACRNPHDPSRMAGGSSSGCGAATAAGLAPLSLGSDTNGSIRVPSSFCG 190
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
I G +P++G ++ G P SLD +G AR+
Sbjct: 191 IFGLKPTYGRLTRHGSFPFCDSLDHLGPFARS 222
>gi|429743346|ref|ZP_19276911.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria sp. oral taxon 020 str. F0370]
gi|429165781|gb|EKY07815.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria sp. oral taxon 020 str. F0370]
Length = 483
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 91/152 (59%), Gaps = 2/152 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A KD+F G+ + S D+ + TA VV LL G +G+T +DEFA
Sbjct: 68 LTGVPVAYKDIFCQTGWRSACASK--MLDNFISPYTATVVQNLLDQGMVTLGRTNMDEFA 125
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G EN +YG NP +H+PGGSS GSA +AA+L +LG+DT G +R PAS CGI
Sbjct: 126 MGSANENSYYGATRNPWNTAHVPGGSSGGSAAVIAARLAPASLGSDTGGSIRQPASHCGI 185
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
G +P++GTVS G++ + SLD G +A+ A
Sbjct: 186 TGLKPTYGTVSRFGMIAYASSLDQAGPMAQTA 217
>gi|367476638|ref|ZP_09476014.1| putative Glu-tRNA amidotransferase [Bradyrhizobium sp. ORS 285]
gi|365271051|emb|CCD88482.1| putative Glu-tRNA amidotransferase [Bradyrhizobium sp. ORS 285]
Length = 450
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 194/403 (48%), Gaps = 43/403 (10%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA P AG+ +IKD+FD+KG VT GS + D A+ A V L K G IG+T
Sbjct: 67 AAPSPYAGIPVSIKDLFDIKGQVTRAGSRALE-DSAPADADAPAVARLRKAGFVVIGRTN 125
Query: 128 LDEFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
+ EFA+ G N HYGTP + + ++PGGSSSG+AV+V ++ ALGTDT G R+
Sbjct: 126 MTEFAYSGIGINPHYGTPKSAWKRDIGYVPGGSSSGAAVSVVDRMAYGALGTDTGGSCRI 185
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL----LQLNAVE 241
PA+F GI+GY+P+ V + G +P S +LD+ G LA + VL ++
Sbjct: 186 PAAFNGIVGYKPTQSRVPLDGGVPLSTTLDSFGPLANTVGCCAVLDSVLADEPIRPLVAR 245
Query: 242 PRRARRL-----IFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVP 296
P + RL + D++ + + + +++ + + PE ++VG +
Sbjct: 246 PVKGLRLAVPTTVVLDELDAVITETFERALDTLARQGALIERIEFPEFLDVG------II 299
Query: 297 SLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEA 356
+KG A + S A +L+ + +Y+ PR+ + EA
Sbjct: 300 GMKGGFAAAES--------YAWHRFLLTAK----GDVYD-------PRVSVRIARG--EA 338
Query: 357 INTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHD--RT 414
I T D I++L R+ ++ A R+ D LV+PT ++ P + +A + R
Sbjct: 339 I-TVPDYIEMLNARRSLVKRAAARIAPYDA-LVMPTTANAPPAIADLADDAAFARENIRA 396
Query: 415 LVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
L + +M C +++P ++ E P+ + G D+ LL+
Sbjct: 397 LRNCTFINMIDGCAISLPAHRHGEVPVGLMLAQSGGHDRKLLE 439
>gi|166030612|ref|ZP_02233441.1| hypothetical protein DORFOR_00278 [Dorea formicigenerans ATCC
27755]
gi|166029614|gb|EDR48371.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Dorea
formicigenerans ATCC 27755]
Length = 488
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 103/188 (54%), Gaps = 7/188 (3%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ AIKD KG T S ++ T+ V L K GA IGKT +DEF
Sbjct: 70 PLAGVPVAIKDNMCTKGTRTTCSSKIL--ENFVPTFTSEAVLNLEKAGAVIIGKTNMDEF 127
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G T E +YG NP H+PGGSS GS AVAA +ALG+DT G +R P+SFCG
Sbjct: 128 AMGSTTETSYYGVTRNPWNLGHVPGGSSGGSCAAVAAGECAYALGSDTGGSIRQPSSFCG 187
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN----ASILHRVG-HVLLQLNAVEPRRAR 246
+ G +P++GTVS G++ SLD +G +A++ A+IL + H + +VE
Sbjct: 188 VTGIKPTYGTVSRYGLIAYGSSLDQIGPIAKDVTDCATILETIASHDVKDSTSVEREYDF 247
Query: 247 RLIFADDI 254
DD+
Sbjct: 248 TSALTDDV 255
>gi|192290373|ref|YP_001990978.1| amidase [Rhodopseudomonas palustris TIE-1]
gi|192284122|gb|ACF00503.1| Amidase [Rhodopseudomonas palustris TIE-1]
Length = 449
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 96/158 (60%), Gaps = 3/158 (1%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA P AG+ +IKD+FD+KG VT GS D+ A+ A V L + G IG+T
Sbjct: 66 AAPSPFAGIPISIKDLFDIKGQVTRAGSRALD-DNPPADSDAPAVARLRRAGFVVIGRTN 124
Query: 128 LDEFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
+ EFA+ G N HYGTP + ++PGGSSSG+AV+VA + LGTDT G R+
Sbjct: 125 MTEFAYSGIGINPHYGTPKAAYRRDVGYVPGGSSSGAAVSVADGMAHAGLGTDTGGSCRI 184
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
PA+F GI+GY+PS V G +P S SLD++G LAR
Sbjct: 185 PAAFNGIVGYKPSQYRVPRDGAVPLSFSLDSIGPLARG 222
>gi|398826108|ref|ZP_10584372.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Bradyrhizobium sp. YR681]
gi|398221825|gb|EJN08221.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Bradyrhizobium sp. YR681]
Length = 451
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 97/170 (57%), Gaps = 3/170 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL GL F++KD DV G T P++ + A+ T+ VV + GA IGKT +D+F
Sbjct: 66 PLYGLVFSVKDCIDVAGEQTTSACPEFA---YVAQHTSPVVADAIAAGAIYIGKTNMDQF 122
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G+ G YG NP +IPGGSSSG+AV+VA FA GTDT G RVPAS+CG
Sbjct: 123 ATGLVGVRSPYGIARNPHHADYIPGGSSSGAAVSVATGTSSFAFGTDTGGSGRVPASYCG 182
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVE 241
+ G++P+ G S G++ +S DT+ L + + V VL + + +
Sbjct: 183 VTGFKPAPGAFSQRGMVYACRSFDTISLYTQQPDDAYDVYRVLARHDPAD 232
>gi|392561290|gb|EIW54472.1| amidase signature enzyme [Trametes versicolor FP-101664 SS1]
Length = 661
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 104/193 (53%), Gaps = 4/193 (2%)
Query: 67 PAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKT 126
P +PLAG + A+KD++D+KG TG G+ + + + ERTA + LL G +GK
Sbjct: 224 PTPEKPLAGFRLAVKDIYDIKGLQTGCGNRAFWQLYPAKERTAPAIQRLLDGGMVLVGKA 283
Query: 127 VLDEFAFGITGENKHYG--TPVNPQMPSHIPGGSSS-GSAVAVAA-QLVDFALGTDTIGC 182
+FA G T + P NP+ + G SSS G A AA +DFA+G+DT G
Sbjct: 284 KTSQFANGETATDDWVDLHAPYNPRGDGYQDGSSSSTGPGTATAAYPWLDFAVGSDTGGS 343
Query: 183 VRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
+R PA G+ G RPSHG V++ V+P S LDT G+ AR+A + GH Q
Sbjct: 344 MRGPAGANGVFGNRPSHGAVALDDVMPLSPELDTAGIFARDAKLWATAGHWWYQNFTSFS 403
Query: 243 RRARRLIFADDIF 255
+ +++IF D F
Sbjct: 404 KFPKKVIFPVDFF 416
>gi|420243236|ref|ZP_14747184.1| allophanate hydrolase, partial [Rhizobium sp. CF080]
gi|398062991|gb|EJL54752.1| allophanate hydrolase, partial [Rhizobium sp. CF080]
Length = 460
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 96/172 (55%), Gaps = 3/172 (1%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
+PL G+ FA+KD DV G T PD+ + E+ A VV LL GA IGKT LD
Sbjct: 64 EKPLFGIPFAVKDNIDVAGMPTTAACPDYA---YMPEKDATVVGLLKAAGAFVIGKTNLD 120
Query: 130 EFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
+FA G+ G Y P N +PGGSSSGSAVA A +V FALGTDT G R+PA
Sbjct: 121 QFATGLVGVRSPYPIPRNAIDAKLVPGGSSSGSAVATAQGIVSFALGTDTAGSGRIPAGL 180
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVE 241
I+G +PS G +S G++P ++LD V + A A +V V + + +
Sbjct: 181 NNIVGLKPSVGALSTTGIIPACRTLDCVSIFALTADDAWKVFSVAAKYDETD 232
>gi|373458897|ref|ZP_09550664.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Caldithrix abyssi
DSM 13497]
gi|371720561|gb|EHO42332.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Caldithrix abyssi
DSM 13497]
Length = 472
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 92/152 (60%), Gaps = 2/152 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ AIKD ++ G T S + + A V+ L GA IGKT +DEF
Sbjct: 64 PLTGVIMAIKDNINIAGERTTCASKIL--ETFVSPFDATVIQRLRDAGAIFIGKTNMDEF 121
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G + EN H+G NP PS++ GGSS GSAVAVA D ALG++T G +R PASF G
Sbjct: 122 AMGSSSENSHFGAVKNPLNPSYVAGGSSGGSAVAVAIGACDAALGSETGGSIRQPASFTG 181
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
++G +P++G VS G++ + SLD +G+ ARN
Sbjct: 182 LVGVKPTYGRVSRYGLVAYASSLDQIGVFARN 213
>gi|339021337|ref|ZP_08645440.1| amidase [Acetobacter tropicalis NBRC 101654]
gi|338751567|dbj|GAA08744.1| amidase [Acetobacter tropicalis NBRC 101654]
Length = 449
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/164 (47%), Positives = 100/164 (60%), Gaps = 1/164 (0%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ F +KD+FD++G VT GS + A R A VV L GA + +DEF
Sbjct: 65 PLAGVPFGVKDLFDLEGQVTTAGSVVLN-NSPPATRDAEVVQRLCAAGAIPVASLNMDEF 123
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+G EN HYGT NP P + GGSS GSA AVAA L+ F LG+DT G +RVPAS CG
Sbjct: 124 AYGFATENAHYGTTRNPHDPQRLAGGSSGGSAAAVAANLLPFTLGSDTNGSIRVPASLCG 183
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLL 235
+ G RP+ G V + GV P + SLD +G A+N + + V VL+
Sbjct: 184 VWGLRPTQGLVPLAGVYPFACSLDVIGPFAQNVADIRSVSEVLI 227
>gi|399040291|ref|ZP_10735692.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium sp. CF122]
gi|398061661|gb|EJL53449.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium sp. CF122]
Length = 453
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/157 (47%), Positives = 94/157 (59%), Gaps = 3/157 (1%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
+R L G+ A KD+FD+KG T GS A+ A VV L + G IG T +
Sbjct: 68 SRGMLDGIPIAWKDLFDIKGRTTTAGSTVLA-SGPAAQADAPVVATLKQAGMVSIGCTNM 126
Query: 129 DEFAFGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
EFAF G N HY TP NP+ +PGGSSSG+ VAVAA LV A+GTDT G VR+P
Sbjct: 127 SEFAFSGLGLNPHYDTPHNPRSSDVPRVPGGSSSGAGVAVAAGLVPVAMGTDTGGSVRIP 186
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
A+F GI+GY+ + G M GV P ++SLD++G L R
Sbjct: 187 AAFNGIVGYKATRGRYPMAGVYPLAKSLDSLGPLCRT 223
>gi|90423196|ref|YP_531566.1| amidase [Rhodopseudomonas palustris BisB18]
gi|90105210|gb|ABD87247.1| Amidase [Rhodopseudomonas palustris BisB18]
Length = 449
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 115/404 (28%), Positives = 185/404 (45%), Gaps = 45/404 (11%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA AG+ +IKD+FD+KG VT GS D+ AE A V L + G IG+T
Sbjct: 66 AAPSAFAGIPVSIKDLFDIKGQVTRAGSRALD-DNPPAEADAAAVARLRRAGFVVIGRTN 124
Query: 128 LDEFAFGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
+ EFA+ G N HYGTP + H+PGGSS+G+AV+VA + ALGTDT G R+
Sbjct: 125 MTEFAYSGIGINPHYGTPKSTWQRDVGHVPGGSSAGAAVSVADGMAHGALGTDTGGSCRI 184
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ--LNAVEPR 243
PA+F G++G++P+ V + G +P S +LD++G LAR+ + VL L ++ R
Sbjct: 185 PAAFNGVVGFKPTQARVPLDGAVPLSPTLDSIGPLARSVQCCATLDAVLADQPLTTLQSR 244
Query: 244 RARRLIFA-------DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVP 296
R + A DD+ + + +S+A + PE ++V
Sbjct: 245 PVRGMRLAVPTTVALDDLDDAVAQAFERALETLSRAGAWIERIAVPEFLDV--------- 295
Query: 297 SLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEA 356
+P + A S + RY + + PR V +R++
Sbjct: 296 ----------APMSAKGGFTAAES--FAWHRYLIVANGDVY----DPR----VRDRIIRG 335
Query: 357 -INTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTL 415
+ D I ++ ++ + A QRL D I V+PT ++ P K+ A L
Sbjct: 336 ETQSAADYIDLINARKSLVARATQRLSPYDAI-VLPTTANTPPKIADLADDKAFTKANLL 394
Query: 416 VL--SSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
L ++ +M C +++P + E P+ + G D+ + +
Sbjct: 395 ALRNCTLINMIDGCAISLPCHRDGEVPVGLMLAGSAGTDQRIFE 438
>gi|171915812|ref|ZP_02931282.1| Amidase [Verrucomicrobium spinosum DSM 4136]
Length = 434
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 129/390 (33%), Positives = 193/390 (49%), Gaps = 49/390 (12%)
Query: 65 PPPAA----RQPLAG---LKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLK 117
PPP A R P G LK +KD+ D+KG VT GS + + A + A + L+ K
Sbjct: 41 PPPHAFISHRAPPDGNTKLKLGVKDLIDMKGEVTTAGSERYYKQGRPAAQDAECLRLIRK 100
Query: 118 -NGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALG 176
N +GKT L EFA G++G N ++GTPVNP + +PGGSSSGSA AV L D ALG
Sbjct: 101 RNDVVIVGKTNLSEFAVGVSGSNDYFGTPVNPVDKTRVPGGSSSGSASAVGLGLADVALG 160
Query: 177 TDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQS-LDTVGLLARNASILHRVGHVLL 235
TDT G +RVPA+ CG+ G + + G +S GV P S + LDTVG +AR+ + L G LL
Sbjct: 161 TDTAGSIRVPAACCGVAGLKTTFGAISTKGVYPISPNYLDTVGPIARDVNGLV-TGMGLL 219
Query: 236 QLNAVEPRRARRLIFADDIFQLSKVPKLK---TIHVISKAIE---SLSGYQ----NPEHM 285
+ R ++ A + ++ +LK T I +AI+ + G+Q + + +
Sbjct: 220 EEGFAS--RYAKVKAAKPTAAVVRIGRLKVPGTDPAIDRAIDARLAARGFQVVPMDKDFL 277
Query: 286 NVGQYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRL 345
N + L+AQ ENG L A ++ + Q+ E E + A +
Sbjct: 278 N------------QWLKAQ----ENG--GLVAAAASWYNNQKIENDEGIENRARKAF-FV 318
Query: 346 GYNVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKT 405
G +F R + Q I R++ A L + + +V+P + PPLKLN T
Sbjct: 319 GDIIFSRRYKDEAKRQAAI----AERDQFVALLNQKFTEVDAIVLPVIRKPPLKLNWFFT 374
Query: 406 --YSAEFHDRTLVLSSIGSMSGCCQVAIPI 433
+ A+F ++ S +G +A+P+
Sbjct: 375 GLFEAKFMKIQCTMAP--SYAGVPALAVPV 402
>gi|398352606|ref|YP_006398070.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sinorhizobium fredii
USDA 257]
gi|390127932|gb|AFL51313.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sinorhizobium fredii
USDA 257]
Length = 601
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 99/172 (57%), Gaps = 3/172 (1%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
+PL G+ FA+KD DV T PD+ + AE A VV LL + GA +GKT LD+
Sbjct: 66 KPLWGIPFAVKDNIDVARMPTTAACPDYA---YLAEGDATVVRLLREAGALVVGKTNLDQ 122
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FA G+ G Y P N + +PGGSSSGSAVA A +V FALGTDT G R+PA
Sbjct: 123 FATGLVGVRTPYPVPRNAIDQALVPGGSSSGSAVATAHGIVSFALGTDTAGSGRIPAGLN 182
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
I+G +PS G +S GV+P ++LD V + A + +RV V + + +P
Sbjct: 183 NIVGLKPSIGALSTTGVVPACRTLDCVSIFALTVADAYRVFKVSARPDETDP 234
>gi|395794061|ref|ZP_10473397.1| amidase [Pseudomonas sp. Ag1]
gi|395341794|gb|EJF73599.1| amidase [Pseudomonas sp. Ag1]
Length = 375
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 118/341 (34%), Positives = 162/341 (47%), Gaps = 48/341 (14%)
Query: 74 AGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAF 133
+G + AIKD D+ GY T GS + D A R A VV +L G +GKT L E AF
Sbjct: 13 SGRRVAIKDSIDIAGYPTRSGSRAFA-DAPPATRHAHVVQAVLDAGWQIVGKTSLHELAF 71
Query: 134 GITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGIL 193
G+TG N GTPVNPQ P +PGGSSSGSA AVAA L D A+GTDT G VRVPA+ CGI
Sbjct: 72 GVTGINDWSGTPVNPQAPDRVPGGSSSGSAAAVAAGLADIAIGTDTGGSVRVPAACCGIA 131
Query: 194 GYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL---LQLNAVEPRRARRLIF 250
G +P++G VS IG P SLD VG LA N L V+ Q A P + + F
Sbjct: 132 GLKPTYGRVSRIGAQPAVSSLDCVGPLAANMQDLIAAMQVICPGFQAQAA-PSGSVPVGF 190
Query: 251 ADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPEN 310
D ++ P LK + A+++ Q H++ +
Sbjct: 191 LD----VACEPWLKA--SLMAAVDAAGWRQQRLHLD----------------------DF 222
Query: 311 GTATLKALSSVMLSLQRYEFKTIYEEWVK----SAKPRLGYNVFERVLEAINTTQDNIKI 366
TA L+ + + E W + K +G +V +R+L A T+ ++
Sbjct: 223 DTAFGAGLTVINV-----------ENWAAFGHLTGKGLIGADVEQRLLAASRTSAADLAE 271
Query: 367 LYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYS 407
VR + L++ +L++PT+ D P L + S
Sbjct: 272 AEVVRTRFSHQVDAALEEFSVLLLPTMPDLPPTLAEARNGS 312
>gi|153856066|ref|ZP_01996957.1| hypothetical protein DORLON_02985 [Dorea longicatena DSM 13814]
gi|149751728|gb|EDM61659.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Dorea
longicatena DSM 13814]
Length = 521
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 97/163 (59%), Gaps = 6/163 (3%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ AIKD KG +T S + + TA V L GA +GKT +DEF
Sbjct: 102 PLAGVPVAIKDNMCTKGMLTTCSSKIL--GNFQPMFTAEAVKNLEAAGAVILGKTNMDEF 159
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G T E ++G NP H+PGGSS GS AVAA+ +ALG+DT G +R P+SFCG
Sbjct: 160 AMGSTTETSYFGPTKNPWNLEHVPGGSSGGSCAAVAAEEAPYALGSDTGGSIRQPSSFCG 219
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN----ASILHRV 230
++G +P++GTVS G++ SLD +G +A++ A+IL +
Sbjct: 220 VVGIKPTYGTVSRYGLIAYGSSLDQIGPVAKDVTDCATILETI 262
>gi|345875921|ref|ZP_08827708.1| glutamyl-tRNA amidotransferase subunit A [Neisseria weaveri LMG
5135]
gi|343968218|gb|EGV36450.1| glutamyl-tRNA amidotransferase subunit A [Neisseria weaveri LMG
5135]
Length = 484
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 98/186 (52%), Gaps = 2/186 (1%)
Query: 39 RNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDW 98
RNP +NG + L E + L G+ A KD+F KG+ + S
Sbjct: 34 RNPSINGYITLDKDLTLAEARAADERIAAGNAGILTGVPIAYKDIFCQKGWKSACSSK-- 91
Query: 99 KRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGS 158
D+ + TA VV LL G +G+T +DEFA G T E YG NP ++PGGS
Sbjct: 92 MLDNFISPYTATVVQNLLNEGMVTLGRTNMDEFAMGSTNETSFYGATKNPWNLENVPGGS 151
Query: 159 SSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVG 218
S GSA VAA+L ALG+DT G +R PAS CGI G +P++G VS G++ + S D G
Sbjct: 152 SGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGLKPTYGVVSRFGMVAYASSFDQAG 211
Query: 219 LLARNA 224
+A+ A
Sbjct: 212 PMAQTA 217
>gi|66047165|ref|YP_237006.1| hypothetical protein Psyr_3938 [Pseudomonas syringae pv. syringae
B728a]
gi|63257872|gb|AAY38968.1| Amidase [Pseudomonas syringae pv. syringae B728a]
Length = 457
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 94/154 (61%), Gaps = 3/154 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
P G+ A KD+FDV G VT G+ + + A A V LL ++G +GKT L EF
Sbjct: 72 PFDGVPIAWKDLFDVAGSVTTAGAA-VRNNLSPALLDAPSVGLLARSGMVSLGKTNLSEF 130
Query: 132 AFGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A+ G N H+GTP+NP S IPGGSSSGSAVAVA V A+GTDT G +RVPA+
Sbjct: 131 AYSGLGLNPHFGTPINPNSDSSPRIPGGSSSGSAVAVANGTVPIAMGTDTAGSIRVPAAL 190
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
G++G+R + S GV P + +LD+VG L R+
Sbjct: 191 NGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRS 224
>gi|384429834|ref|YP_005639195.1| glu-trnAgln amidotransferase a subunit [Xanthomonas campestris pv.
raphani 756C]
gi|341938938|gb|AEL09077.1| glu-trnAgln amidotransferase a subunit [Xanthomonas campestris pv.
raphani 756C]
Length = 486
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/162 (48%), Positives = 99/162 (61%), Gaps = 1/162 (0%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAG+ F +KD+FDV G VT G+ + A R A VV L GA +G +DEFA
Sbjct: 108 LAGVPFVVKDLFDVAGQVTTAGA-ALRAQSAPATRDAAVVQRLSDAGAVLVGTANMDEFA 166
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+G N+HYGT NP H+ GGSS GSA AVAA V FALG+DT G +RVPA+ CG+
Sbjct: 167 YGFATVNEHYGTTANPHDHRHLAGGSSGGSAAAVAAGWVPFALGSDTNGSIRVPAALCGV 226
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL 234
G RP+HGT+ + GV P +LD VG A + + L RV V+
Sbjct: 227 YGLRPTHGTLPLEGVFPFVDALDVVGPFATSVADLRRVYEVM 268
>gi|188583116|ref|YP_001926561.1| allophanate hydrolase [Methylobacterium populi BJ001]
gi|179346614|gb|ACB82026.1| allophanate hydrolase [Methylobacterium populi BJ001]
Length = 603
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 100/172 (58%), Gaps = 3/172 (1%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
+PL G+ FA+KD DV G T PD+ + +A V LL GA +GKT LD+
Sbjct: 66 KPLWGVPFAVKDNVDVAGLPTTAACPDFA---FTPQASAPAVERLLAAGALLVGKTNLDQ 122
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FA G+ G Y P N P+ +PGGSSSGSAVAVA LV F+LGTDT G RVPA
Sbjct: 123 FATGLVGVRTPYPVPRNAIDPAVVPGGSSSGSAVAVARGLVGFSLGTDTAGSGRVPAGLN 182
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
I+G +PS G+VS GV+P ++LDT+ + A + V ++ +A +P
Sbjct: 183 NIVGLKPSLGSVSSRGVVPACRTLDTLSVFAGTVAEADAVYRIMAGYDAEDP 234
>gi|422644242|ref|ZP_16707380.1| hypothetical protein PMA4326_04349 [Pseudomonas syringae pv.
maculicola str. ES4326]
gi|330957794|gb|EGH58054.1| hypothetical protein PMA4326_04349 [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 456
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 95/154 (61%), Gaps = 3/154 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
P G+ A KD+FDV G VT G+ + A A V LL + G +GKT L EF
Sbjct: 72 PFDGVPIAWKDLFDVAGCVTTAGAA-LRHTLSPALLDAPSVGLLARAGMISLGKTNLSEF 130
Query: 132 AFGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A+ G N H+GTPVNP + IPGGSSSGSAVAVA+ +V A+GTDT G +R+PA+F
Sbjct: 131 AYSGLGLNPHFGTPVNPLSDAVPRIPGGSSSGSAVAVASGIVPIAMGTDTAGSIRIPAAF 190
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
G++G+R + S GV P + +LD+VG L R+
Sbjct: 191 NGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRS 224
>gi|218529262|ref|YP_002420078.1| allophanate hydrolase [Methylobacterium extorquens CM4]
gi|218521565|gb|ACK82150.1| allophanate hydrolase [Methylobacterium extorquens CM4]
Length = 625
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 98/172 (56%), Gaps = 3/172 (1%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
+PL G+ FA+KD DV G T D+ E TA V LL GA IGKT LD+
Sbjct: 73 KPLWGVPFAVKDNLDVAGLPTTAACADFAFVPSE---TAPCVARLLAAGAILIGKTNLDQ 129
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FA G+ G + P N +PGGSSSGSAVAVA LV FALGTDT G RVPA
Sbjct: 130 FATGLVGLRTPHPAPRNALNADLVPGGSSSGSAVAVAHGLVAFALGTDTAGSGRVPAGLN 189
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
++G +PS G+VS G+LP ++LDTV + A + RV ++ +A +P
Sbjct: 190 NVVGLKPSLGSVSSRGLLPACRTLDTVSVFAGTVADADRVFRIMAAYDAADP 241
>gi|422675326|ref|ZP_16734671.1| hypothetical protein PSYAR_21412 [Pseudomonas syringae pv. aceris
str. M302273]
gi|330973045|gb|EGH73111.1| hypothetical protein PSYAR_21412 [Pseudomonas syringae pv. aceris
str. M302273]
Length = 457
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 94/154 (61%), Gaps = 3/154 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
P G+ A KD+FDV G VT G+ + + A A V LL ++G +GKT L EF
Sbjct: 72 PFDGVPIAWKDLFDVAGSVTTAGAA-VRNNLSPALLDAPSVGLLARSGMVSLGKTNLSEF 130
Query: 132 AFGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A+ G N H+GTP+NP S IPGGSSSGSAVAVA V A+GTDT G +RVPA+
Sbjct: 131 AYSGLGLNPHFGTPINPNSDSSPRIPGGSSSGSAVAVANGTVPIAMGTDTAGSIRVPAAL 190
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
G++G+R + S GV P + +LD+VG L R+
Sbjct: 191 NGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRS 224
>gi|91788558|ref|YP_549510.1| amidase [Polaromonas sp. JS666]
gi|91697783|gb|ABE44612.1| Amidase [Polaromonas sp. JS666]
Length = 457
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 100/190 (52%), Gaps = 6/190 (3%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ +IKD+FDV G T GS AE V L GA G+T + EF
Sbjct: 76 PLAGIPVSIKDLFDVAGQTTAAGSTVLANARPAAEDCPAVARLR-AAGAVIAGRTNMVEF 134
Query: 132 AFGITGENKHYGTPVNPQ--MPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
AF G N HYGTPVNP IPGGSSSG+AV+VA LG+DT G +R+PA+
Sbjct: 135 AFSGVGINPHYGTPVNPADTATERIPGGSSSGAAVSVATGAAMVGLGSDTGGSIRIPAAL 194
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLN---AVEPRRAR 246
CGI+G++ + V G +P S SLDTV L R+ S V VL A +P A
Sbjct: 195 CGIVGFKSTARLVPTSGAVPLSTSLDTVCALTRSVSDAITVHEVLAARTVTLAGKPLSAC 254
Query: 247 RLIFADDIFQ 256
RL A Q
Sbjct: 255 RLAVARTQMQ 264
>gi|255723325|ref|XP_002546596.1| hypothetical protein CTRG_06074 [Candida tropicalis MYA-3404]
gi|240130727|gb|EER30290.1| hypothetical protein CTRG_06074 [Candida tropicalis MYA-3404]
Length = 459
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 109/176 (61%), Gaps = 2/176 (1%)
Query: 67 PAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKT 126
P + PL+G K+ +KD K + S ++++ A +V LL G+T +GK+
Sbjct: 39 PTSTGPLSGTKYILKDNIVTKNSTSTAASKTLS--NYKSPFNATIVDLLSSQGSTLVGKS 96
Query: 127 VLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
LDEF G N ++G +NPQ I GGSS GSA AV++ + DF++GTDT G VR+P
Sbjct: 97 NLDEFGMGSANLNSYFGPVINPQDKPKITGGSSGGSAAAVSSGICDFSIGTDTGGSVRLP 156
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
AS+C + G++P++G +S GV+P +Q+LDTVG+L N I+H V +VL + + +P
Sbjct: 157 ASYCQVFGFKPTYGRISRWGVIPYAQTLDTVGILGNNIDIIHEVYNVLNKYDEKDP 212
>gi|350571846|ref|ZP_08940162.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
wadsworthii 9715]
gi|349791031|gb|EGZ44924.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria
wadsworthii 9715]
Length = 484
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 98/186 (52%), Gaps = 2/186 (1%)
Query: 39 RNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDW 98
RNP +NG + L E + L G+ A KD+F KG+ + S
Sbjct: 34 RNPAINGYITLDQDLTLAEAKAADERIAAGNAGILTGVPIAYKDIFCQKGWKSACSSK-- 91
Query: 99 KRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGS 158
D+ + TA VV LL G +G+T +DEFA G T E YG NP ++PGGS
Sbjct: 92 MLDNFISPYTATVVQNLLNEGMVTLGRTNMDEFAMGSTNETSFYGATQNPWNLENVPGGS 151
Query: 159 SSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVG 218
S GSA VAA+L ALG+DT G +R PAS CGI G +P++G VS G++ + S D G
Sbjct: 152 SGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGLKPTYGVVSRFGMVAYASSFDQAG 211
Query: 219 LLARNA 224
+A+ A
Sbjct: 212 PMAQTA 217
>gi|121602953|ref|YP_980282.1| allophanate hydrolase [Polaromonas naphthalenivorans CJ2]
gi|120591922|gb|ABM35361.1| Ankyrin [Polaromonas naphthalenivorans CJ2]
Length = 600
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 93/159 (58%), Gaps = 3/159 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ FAIKD D+ G T G PD+ + E +A VV LL GA IGKT LD+F
Sbjct: 68 PLWGIPFAIKDNIDLAGVPTTAGCPDYA---YTPEASATVVQRLLDAGAIAIGKTNLDQF 124
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G+ G YG N P ++ GGSS+GSAV+VA F+LGTDT G RVPA F
Sbjct: 125 ATGLNGTRSPYGACRNAFNPDYVSGGSSAGSAVSVALGHASFSLGTDTAGSGRVPAGFNH 184
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRV 230
++G +PS G +S GV+P +SLD V + A A +V
Sbjct: 185 LVGLKPSLGLLSTQGVVPACRSLDVVSIFALTADDAQQV 223
>gi|443646845|ref|ZP_21129523.1| amidohydrolase, AtzE family protein [Microcystis aeruginosa
DIANCHI905]
gi|159028871|emb|CAO90676.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443335674|gb|ELS50138.1| amidohydrolase, AtzE family protein [Microcystis aeruginosa
DIANCHI905]
Length = 439
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 112/194 (57%), Gaps = 4/194 (2%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAG+ FA+K++FD+KG VT GS RDH A + A+ + L GA +G T +DE+A
Sbjct: 64 LAGVPFAVKNLFDIKGIVTLAGS-KINRDHPAARQDAIAIQTLEAAGAVLVGATNMDEYA 122
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+G EN HY NP+ PS I GGSS GSA AVAA LV ALG+DT G VRVPA+ CG+
Sbjct: 123 YGFVTENAHYRATPNPRDPSRISGGSSGGSAAAVAANLVPLALGSDTNGSVRVPAACCGV 182
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP---RRARRLI 249
+G +P+ G VS G+ SLD G + N + + + + + N P ++
Sbjct: 183 VGLKPTFGRVSRQGLFLFVSSLDHPGFFSDNVADMAAIWSLFAKNNLKAPLSGLEGVKIA 242
Query: 250 FADDIFQLSKVPKL 263
ADD FQ P++
Sbjct: 243 LADDYFQQGAEPEV 256
>gi|297539390|ref|YP_003675159.1| allophanate hydrolase [Methylotenera versatilis 301]
gi|297258737|gb|ADI30582.1| allophanate hydrolase [Methylotenera versatilis 301]
Length = 457
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 175/378 (46%), Gaps = 30/378 (7%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
A PL G+ FAIKD D+ G T P++ + +A VV L+ GA IGKT L
Sbjct: 61 ADLPLYGVPFAIKDNIDLAGIPTTAACPEYA---YIPTVSATVVQKLIDAGAIPIGKTNL 117
Query: 129 DEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPAS 188
D+FA G+ G YG N P +I GGSS+GSAV+VA + F+LGTDT G RVPAS
Sbjct: 118 DQFATGLVGTRSPYGACQNSFNPDYISGGSSAGSAVSVALGMASFSLGTDTAGSGRVPAS 177
Query: 189 FCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRL 248
F ++G++PS G +S GV+P ++LD V + A A VL + A
Sbjct: 178 FNNLVGHKPSCGLLSTSGVVPACRTLDCVSIFALTA---EDAAQVLESAQGFDEEDAYSR 234
Query: 249 IFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSP 308
++ +++ K T V + + L+ + N E + + + +L G +A
Sbjct: 235 KAVAEVLTIAE--KGFTFGVPKQ--DQLAFFNNNETPELFKQAIEQLKALGG-KAVEIDF 289
Query: 309 ENGTATLKALSSVMLSLQRY-EFKTIYEEWVKSAKPRLGYNVFERVLEAIN--TTQDNIK 365
E T + L +RY + +E AKP + V ++++ + D
Sbjct: 290 EPFLETARLLYEGPWVAERYAAIREFFE-----AKPEAIFPVTKQIIGGATKFSAADTYL 344
Query: 366 ILYKVRNEMRAALQRLLKDDKILVIPT---------VSDPPLKLNTKKTYSAEFHDRTLV 416
YK++ R A + + D ++V PT V+ P++ N+ Y F + L
Sbjct: 345 SQYKLKALQRKA-EAVWNDIDVMVTPTAGTIYTIDEVNADPIRCNSNLGYYTNFMN-LLD 402
Query: 417 LSSIGSMSGCCQVAIPIG 434
LS+ +G Q +P G
Sbjct: 403 LSATAVPTGFQQDGMPFG 420
>gi|377807684|ref|YP_004978876.1| amidase [Burkholderia sp. YI23]
gi|357938881|gb|AET92438.1| amidase [Burkholderia sp. YI23]
Length = 447
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 187/406 (46%), Gaps = 59/406 (14%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGS---PDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
PLAG+ ++KD+FDV+G +T GS P+ A R A + L GA +G+T +
Sbjct: 67 PLAGVPISVKDLFDVQGEITRAGSRILPE-----QAATRDAPAIGRLRAAGAVFVGRTNM 121
Query: 129 DEFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
EFA+ G N HYGTP NP + + IPGGSSSG+AV+V + A+G+DT G R+P
Sbjct: 122 TEFAYSGLGINPHYGTPANPFERHTARIPGGSSSGAAVSVTDGMAAAAIGSDTGGSCRIP 181
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRAR 246
A+ CG+ G++P+ + + G LP S S D++G +A + + + ++ A E A
Sbjct: 182 AALCGLAGFKPTAARIPLQGALPLSSSYDSIGSIAPSVACCASLDSIM----AGEAEAA- 236
Query: 247 RLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQ--NPEHMNVGQYIASNVPSLKGLRAQ 304
++ +P L+G + P H+ + A + + A+
Sbjct: 237 ---------SIASLP--------------LTGLRLAMPAHIVLDDMDAHVAATFERAIAR 273
Query: 305 STSPENGTATLKALS----SVMLSLQRYEFKTIYEEWVKSAK--PRLGYNVFERVLEAIN 358
T+ AT++ +S + + +L ++ E W R + RV+ I
Sbjct: 274 LTA---AGATVREVSFESWTHLATLGQHGGLVAAEAWAWHVGLIKRHADDYDPRVIARIR 330
Query: 359 TTQDNIKILYKVRNEMRAALQRLLKD-----DKIL--VIPTVSDPPLKLNTKKTYSAEFH 411
++ Y +R L R D D I+ +P V+ L+ + Y+A
Sbjct: 331 LGSEHSTAEYLRNRALREQLCRQADDELRPYDAIVCPTVPIVAPRIADLDDEPAYTAA-- 388
Query: 412 DRTLVLS-SIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+R L+ + SI +M C V+IP + P+ + + H D+ LL
Sbjct: 389 NRLLLRNPSIANMLDLCAVSIPCHANGDAPVGLMLMGRHMSDRRLL 434
>gi|320333783|ref|YP_004170494.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Deinococcus
maricopensis DSM 21211]
gi|319755072|gb|ADV66829.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Deinococcus
maricopensis DSM 21211]
Length = 483
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 98/163 (60%), Gaps = 2/163 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ IKD +++G T GS + + TA V L GA IGK +DEF
Sbjct: 65 PLAGVPVVIKDNLNLQGTHTTCGS--RALGGYVSPYTATAVQRLRAAGAVIIGKANMDEF 122
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G + E+ +G NP P+ +PGGSS GSAVAVA+ +V +LG+DT G VR PA+F G
Sbjct: 123 AMGSSTESGAFGRARNPWDPARVPGGSSGGSAVAVASGMVPLSLGSDTGGSVRQPAAFTG 182
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL 234
+ G++P++G VS G++ + SLD VG AR+A L V V+
Sbjct: 183 VYGFKPTYGRVSRYGLVAYASSLDQVGPFARHAEDLATVMDVI 225
>gi|422618149|ref|ZP_16686848.1| hypothetical protein PSYJA_13642 [Pseudomonas syringae pv. japonica
str. M301072]
gi|330898528|gb|EGH29947.1| hypothetical protein PSYJA_13642 [Pseudomonas syringae pv. japonica
str. M301072]
Length = 414
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 93/154 (60%), Gaps = 3/154 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
P G+ A KD+FDV G VT G+ + A A V LL ++G +GKT L EF
Sbjct: 29 PFDGVPIAWKDLFDVAGSVTTAGA-AVRTSLSPALLDAPTVGLLARSGMVSLGKTNLSEF 87
Query: 132 AFGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A+ G N H+GTPVNP S +PGGSSSGSAVAVA V A+GTDT G +RVPA+
Sbjct: 88 AYSGLGLNPHFGTPVNPSSDSSPRVPGGSSSGSAVAVANGTVPIAMGTDTAGSIRVPAAL 147
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
G++G+R + S GV P + +LD+VG L R+
Sbjct: 148 NGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRS 181
>gi|409079397|gb|EKM79758.1| hypothetical protein AGABI1DRAFT_113062 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 696
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 127/444 (28%), Positives = 196/444 (44%), Gaps = 62/444 (13%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG++FA+KD+FDVKG TG GS +++ + E TA + LL GA+ +GKT +F
Sbjct: 238 PLAGMRFAVKDIFDVKGLATGAGSHAYRKALGQVEETAPSIQRLLDLGASIVGKTRTSQF 297
Query: 132 AFGIT-GENKHYGTPVNPQMPSHIPGGSSSGSAVAVAA--QLVDFALGTDTIGCVRVPAS 188
A G E + NP+ ++ G+SS + + A +DFA+G+DT G +R PA+
Sbjct: 298 AHGAQPWEYADFEYSWNPRGDGYLTAGASSSGSASAIAAYDWIDFAVGSDTRGSIRKPAA 357
Query: 189 FCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRR---- 244
G G RPSHGT+ M GV+P S+ +DT G+ AR+ I +G + + RR
Sbjct: 358 LVGAFGLRPSHGTLDMKGVVPLSEEMDTAGVFARDYIIFEALGRNWYANSDIINRRPTLR 417
Query: 245 -ARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQN--PEHMNVGQYIASNVPSLKGL 301
+ L++ D F L P + I + L + N P+ +N+ + + PS
Sbjct: 418 LPKNLLYPIDHFPLQN-PDAQMF--IERFKHHLRKHLNIVPKPINMTDTLTPHFPSQSFE 474
Query: 302 RAQSTSPENGTATLKALSSVMLSLQR-YEFKTIYEEWVKSAKPRLGYNVFERVLEAINTT 360
+ + S N ++ SV L R Y K EE + + + +F++ + T
Sbjct: 475 KFHTMS--NRLVEWRSWQSVGKPLYRAYAQKFGAEELIDFELDPVPHRMFKKGKQL--TQ 530
Query: 361 QDNIKILYKVR------NEMRAALQRLLKDDKILVI--PTVSDPPLKLNTKKTYSAEFHD 412
D ++ L R NE D I + T P ++ T F D
Sbjct: 531 SDFVEALAAKRKFEEALNEEVFPFHAKTCSDSIFMYDASTGGRPSFRVEEMNT----FED 586
Query: 413 RT-LVLSS---------------------IGSMSGCCQVAIPI----------GKYNEHP 440
T LVL+S +GSM G +V IP+ GK P
Sbjct: 587 ATQLVLTSPATGTNDEEPTEPKLEHFLHYVGSMGGLPEVTIPLGQVQYKSPVTGKLEYMP 646
Query: 441 ISISFITYHGGDKFLLDTVLDLYD 464
+++ T G D L + V +L D
Sbjct: 647 VAVQLATRKGCDGVLYELVKELGD 670
>gi|39934847|ref|NP_947123.1| amidase [Rhodopseudomonas palustris CGA009]
gi|39648697|emb|CAE27219.1| putative Glu-tRNA amidotransferase [Rhodopseudomonas palustris
CGA009]
Length = 452
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 97/158 (61%), Gaps = 3/158 (1%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA P AG+ +IKD+FD+KG VT GS D+ A+ A V L + G IG++
Sbjct: 69 AAPSPFAGIPISIKDLFDIKGQVTRAGSRALD-DNPPADSDAPAVARLRRAGFVVIGRSN 127
Query: 128 LDEFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
+ EFA+ G N HYGTP + ++PGGSSSG+AV+VA + LGTDT G R+
Sbjct: 128 MTEFAYSGIGINPHYGTPKAAYRRNVGYVPGGSSSGAAVSVADGMAHAGLGTDTGGSCRI 187
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
PA+F GI+GY+PS V G +P S SLD++G LAR+
Sbjct: 188 PAAFNGIVGYKPSQYRVPRDGAVPLSFSLDSIGPLARS 225
>gi|426192663|gb|EKV42599.1| hypothetical protein AGABI2DRAFT_195883 [Agaricus bisporus var.
bisporus H97]
Length = 696
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 193/445 (43%), Gaps = 64/445 (14%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG++FA+KD+FDVKG TG GS +++ + E TA + LL GA+ +GKT +F
Sbjct: 238 PLAGMRFAVKDIFDVKGLATGAGSHAYRKALGQVEETAPSIQRLLDLGASIVGKTRTSQF 297
Query: 132 AFGIT-GENKHYGTPVNPQMPSHIPGGSSSGSAVAVAA--QLVDFALGTDTIGCVRVPAS 188
A G E + NP+ ++ G+SS + + A + +DFA+G+DT G +R PA+
Sbjct: 298 AHGAQPWEYADFEYSWNPRGDGYLTAGASSSGSASAIAAYEWIDFAVGSDTRGSIRKPAA 357
Query: 189 FCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRR---- 244
G G RPSHGT+ M GV+P S+ +DT G+ AR+ I + + + RR
Sbjct: 358 LVGAFGLRPSHGTLDMKGVVPLSEEMDTAGVFARDYIIFEALARNWYANSEIINRRPTLR 417
Query: 245 -ARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQN--PEHMNVGQYIASNVPSLKGL 301
+ L++ D F L P + I + L + N P+ +N+ + + PS
Sbjct: 418 LPKNLLYPIDHFPLQN-PDAQMF--IERFKHHLRKHLNIVPKPINMTDTLTPHFPSQSFE 474
Query: 302 RAQSTSPENGTATLKALSSVMLSLQR-------------YEFKTIYEEWVKSAKPRLGYN 348
+ + S N ++ SV L R +E + K K +
Sbjct: 475 KFHTMS--NRLVEWRSWQSVGKPLYRAYAQKFGAEELIDFELDPVPHRMFKKGKQLTQSD 532
Query: 349 VFE------RVLEAIN---------TTQDNIKILYKV----RNEMRAALQRLLKDDKILV 389
E + EA+N T D+I +Y R R +D LV
Sbjct: 533 FVEALAVKRKFEEALNEEVFPFHAKTCSDSI-FMYDASTGGRPSFRVEEMNTFEDATQLV 591
Query: 390 IPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPI----------GKYNEH 439
+ + P N +++ + L +GSM G +V IP+ GK
Sbjct: 592 L---TSPATGTNDEESTEPKLEH---FLHYVGSMGGLPEVTIPLGQIQYKSPVTGKLEYM 645
Query: 440 PISISFITYHGGDKFLLDTVLDLYD 464
P+++ T G D L + V +L D
Sbjct: 646 PVAVQLATRKGCDGVLYELVKELGD 670
>gi|21229770|ref|NP_635687.1| amidase [Xanthomonas campestris pv. campestris str. ATCC 33913]
gi|66766646|ref|YP_241408.1| amidase [Xanthomonas campestris pv. campestris str. 8004]
gi|21111262|gb|AAM39611.1| Glu-tRNAGln amidotransferase A subunit [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66571978|gb|AAY47388.1| Glu-tRNAGln amidotransferase A subunit [Xanthomonas campestris pv.
campestris str. 8004]
Length = 486
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/162 (48%), Positives = 98/162 (60%), Gaps = 1/162 (0%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAG+ F +KD+FDV G VT G+ + A R A VV L GA +G +DEFA
Sbjct: 108 LAGVPFVVKDLFDVAGQVTTAGA-ALRAQSAPATRDAAVVQRLSDAGAVLVGTANMDEFA 166
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+G N HYGT NP H+ GGSS GSA AVAA V FALG+DT G +RVPA+ CG+
Sbjct: 167 YGFATVNAHYGTTANPHDHRHLAGGSSGGSAAAVAAGWVPFALGSDTNGSIRVPAALCGV 226
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL 234
G RP+HGT+ + GV P +LD VG A + + L RV V+
Sbjct: 227 YGLRPTHGTLPLQGVFPFVDALDVVGPFATSVADLRRVYEVM 268
>gi|374849521|dbj|BAL52534.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[uncultured Chloroflexi bacterium]
Length = 451
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 129/430 (30%), Positives = 210/430 (48%), Gaps = 46/430 (10%)
Query: 31 LAETLRRR---RNPKLNGRVDFGAFLERFEL-IPFPQPPPPAARQPLAGLKFAIKDVFDV 86
L + R+R NP+LN AFL E + FP P PLAG+ AIKD+ DV
Sbjct: 23 LFQAFRQRIEAENPRLN------AFLSLAEPPLEFPSP-----ETPLAGVPLAIKDLIDV 71
Query: 87 KGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPV 146
G T GSP + A + A V+ L + GAT +GKT E A GITG N HYG
Sbjct: 72 AGLPTTAGSPRFF-GAQPAVKDAEVIRRLKQAGATILGKTHTHEIALGITGINPHYGAAR 130
Query: 147 NPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIG 206
NP P I GGSSSGSA AVAA L ALGTDT G VR+PAS CG++G++P+ G +S G
Sbjct: 131 NPHDPQRITGGSSSGSAAAVAAGLALAALGTDTGGSVRIPASLCGVVGFKPTFGRISTRG 190
Query: 207 VLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTI 266
VLP S +LD VG+L R + + +L + +P A + + ++
Sbjct: 191 VLPLSWNLDHVGVLTRTVADAALLYQILAGYDPQDP--ASQDVLVEE------------- 235
Query: 267 HVISKAIESLSGYQNPEHMNVGQYI-ASNVPSLKGLRAQSTSPENGTATL--KALSSVML 323
V+S + G++ + VG+YI A++ L+G+R + ++ AT+ K ++ +
Sbjct: 236 -VLSGLEGGVEGWRI--ALAVGEYIEAADSLVLEGVREAAARFQSLGATVVEKEITPLHE 292
Query: 324 SLQRYEFKTI------YEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNEMRAA 377
+ Q I + + + G +V +R+ + + + + ++E R
Sbjct: 293 AAQANGLMVIADAAAFHRQRLAEHPDWFGEDVRQRLERGRALSSTDYVLARRTQSEARRY 352
Query: 378 LQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYN 437
+ + +L++PT + P + SA + + ++ +++G +++P G+
Sbjct: 353 FELFFQQFDLLLLPTTATPAAPIEGLD--SAAYAPKMTRFTAPFNLTGLPAISLPCGRDE 410
Query: 438 EH-PISISFI 446
+ P+ + +
Sbjct: 411 QGLPVGLQIV 420
>gi|421139242|ref|ZP_15599284.1| hypothetical protein MHB_08126 [Pseudomonas fluorescens BBc6R8]
gi|404509617|gb|EKA23545.1| hypothetical protein MHB_08126 [Pseudomonas fluorescens BBc6R8]
Length = 441
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 97/160 (60%), Gaps = 6/160 (3%)
Query: 69 ARQPLA---GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGK 125
A QPL+ G+ A KD+FDV G +T G+ ++R+ A V LL + G +GK
Sbjct: 51 AGQPLSVFDGVPLAWKDLFDVAGSITTAGAA-YRRNAPAVLLDAPSVGLLCRAGMVSVGK 109
Query: 126 TVLDEFAFGITGENKHYGTPVNPQMPSH--IPGGSSSGSAVAVAAQLVDFALGTDTIGCV 183
T L E A+ G N H+GTP NP IPGGSSSGSAVAVAA +V A+GTDT G +
Sbjct: 110 TNLSELAYSGLGLNPHFGTPHNPASVDQPRIPGGSSSGSAVAVAAGIVPIAMGTDTAGSI 169
Query: 184 RVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
R+PA+ G++GYR S S GV P + +LD++G L R+
Sbjct: 170 RIPAALNGVVGYRSSCRRYSRDGVFPLAHTLDSLGPLTRS 209
>gi|381205845|ref|ZP_09912916.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [SAR324 cluster
bacterium JCVI-SC AAA005]
Length = 489
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 88/152 (57%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAGL AIKD ++ G D + + A VV L + A IG T +DEFA
Sbjct: 71 LAGLPVAIKDNISIEDPNLTTGCSSKILDGYHSPYDATVVKSLKEQDALVIGTTNMDEFA 130
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G + EN YG +NP S +PGGSS G+AVAVA + ALG+DT G VR PASFCGI
Sbjct: 131 MGSSNENSSYGPTLNPWDSSRVPGGSSGGAAVAVATGMAVAALGSDTGGSVRQPASFCGI 190
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
G++P++G +S G++ SLD VG L R A
Sbjct: 191 TGFKPTYGALSRYGLVAYGSSLDQVGCLTRTA 222
>gi|315427137|dbj|BAJ48752.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Candidatus Caldiarchaeum subterraneum]
gi|315427156|dbj|BAJ48770.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Candidatus Caldiarchaeum subterraneum]
gi|343485771|dbj|BAJ51425.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Candidatus Caldiarchaeum subterraneum]
Length = 443
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/165 (48%), Positives = 107/165 (64%), Gaps = 4/165 (2%)
Query: 61 FPQPPPPAA--RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKN 118
FP+P + R+ L G+ F +KDVF +KGY T GS + + RTA VV+ +L+
Sbjct: 49 FPKPVVERSFRRRFLRGISFGVKDVFHIKGYPTTAGSRLL--SNMVSSRTAAVVSRILEA 106
Query: 119 GATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTD 178
G GKT L EFAFG++ N YG +NP S + GGSS GSAVAVA + D LGTD
Sbjct: 107 GGAVNGKTNLHEFAFGVSNINPFYGACLNPFDTSRVSGGSSGGSAVAVALGMCDIGLGTD 166
Query: 179 TIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
T G VRVPA+FCG++G++P+ G +S GV+P S S+D VG+L+RN
Sbjct: 167 TAGSVRVPAAFCGVVGFKPTSGQLSTDGVIPLSWSMDHVGILSRN 211
>gi|196228326|ref|ZP_03127193.1| Amidase [Chthoniobacter flavus Ellin428]
gi|196227729|gb|EDY22232.1| Amidase [Chthoniobacter flavus Ellin428]
Length = 431
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 66 PPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGK 125
P A +P GLK A+KD D++G VT GS +++ A+ A + + G +GK
Sbjct: 45 PKEAHKP--GLKLAVKDNIDMRGVVTTAGSEYLAKNNPPAKADAQCLAIARARGVPIVGK 102
Query: 126 TVLDEFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCV 183
T L EFA +G N++YGTP +P M IPGGSS GSAVAVA D + GTDT G V
Sbjct: 103 TNLSEFAVAPSGFNEYYGTPKSPLSHMHRLIPGGSSCGSAVAVARGYADVSFGTDTAGSV 162
Query: 184 RVPASFCGILGYRPSHGTVSMIGVLP-NSQSLDTVGLLARN 223
RVPA+ CG++G + + G VS+ GV+P + LDTVG + +N
Sbjct: 163 RVPAACCGVVGLKTTFGLVSLHGVVPVEPKHLDTVGPIGKN 203
>gi|289669967|ref|ZP_06491042.1| amidase [Xanthomonas campestris pv. musacearum NCPPB 4381]
Length = 486
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/167 (49%), Positives = 99/167 (59%), Gaps = 6/167 (3%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAG+ F +KD+FDV G VT G+ + A R A VV L GA +G +DEFA
Sbjct: 108 LAGVPFVVKDLFDVAGQVTTAGAAG-RAQCAPAARDAAVVQRLGDAGAVLVGTANMDEFA 166
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+G N HYGT NP H+ GGSS GSA AVAA LV FALG+DT G +RVPA+ CG+
Sbjct: 167 YGFATVNAHYGTTTNPHDHQHLAGGSSGGSAAAVAAGLVPFALGSDTNGSIRVPAALCGV 226
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRV-----GHVL 234
G RP+HG V + GV P +LD VG A + S L RV GH L
Sbjct: 227 YGLRPTHGAVPVDGVFPFVDALDVVGPFATSVSDLRRVYEVMCGHAL 273
>gi|316935070|ref|YP_004110052.1| amidase [Rhodopseudomonas palustris DX-1]
gi|315602784|gb|ADU45319.1| Amidase [Rhodopseudomonas palustris DX-1]
Length = 449
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/169 (43%), Positives = 101/169 (59%), Gaps = 3/169 (1%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA P AG+ +IKD+FD+KG VT GS D+ A+ A V L + G IG++
Sbjct: 66 AAPSPFAGIPISIKDLFDIKGQVTRAGSRALD-DNPPADSDAPAVARLRRAGFVVIGRSN 124
Query: 128 LDEFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
+ EFA+ G N HYGTP + ++PGGSSSG+AV+VA + LGTDT G R+
Sbjct: 125 MTEFAYSGIGINPHYGTPKAAYRRDVGYVPGGSSSGAAVSVADGMAHAGLGTDTGGSCRI 184
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL 234
PA+F GI+GY+PS V G +P S SLD++G LAR+ + + +L
Sbjct: 185 PAAFNGIVGYKPSQYRVPRDGAVPLSFSLDSIGPLARSVACCATLDAIL 233
>gi|440722768|ref|ZP_20903142.1| hypothetical protein A979_18090 [Pseudomonas syringae BRIP34876]
gi|440725660|ref|ZP_20905924.1| hypothetical protein A987_06417 [Pseudomonas syringae BRIP34881]
gi|440360689|gb|ELP97948.1| hypothetical protein A979_18090 [Pseudomonas syringae BRIP34876]
gi|440368455|gb|ELQ05491.1| hypothetical protein A987_06417 [Pseudomonas syringae BRIP34881]
Length = 457
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 185/407 (45%), Gaps = 48/407 (11%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
P G+ A KD+FDV G VT G+ + A A V LL ++G +GKT L EF
Sbjct: 72 PFDGVPIAWKDLFDVAGSVTTAGAA-VRTSLSPALLDAPTVGLLARSGMVSLGKTNLSEF 130
Query: 132 AFGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A+ G N H+GTPVNP S +PGGSSSGSAVAVA V A+GTDT G +RVPA+
Sbjct: 131 AYSGLGLNPHFGTPVNPSSDSSPRVPGGSSSGSAVAVANGTVPIAMGTDTAGSIRVPAAL 190
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
G++G+R + S GV P + +LD+VG L R+ R +
Sbjct: 191 NGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRS---------------------VRDAL 229
Query: 250 FADDIFQLSKVPKLKTIHVISKAIES---LSGYQNPEHMNVGQYIASNV-PSLKGLRAQS 305
DD+ + K +I +++ L E V + N+ +++ LRA
Sbjct: 230 VIDDLL----CARSKPSSLIPRSLAGQRFLLDQAVLEDERVTPAVRDNLWRAVEALRASG 285
Query: 306 TSPENGTATLKALSSVMLSLQRYEFKTIYEEWV-------KSAKPRLGYNVFERVLEAIN 358
E +A + +L +Q+ + E + A +L V +R LEA
Sbjct: 286 ALIE--VKPCQAFQATLLLIQQQGWLGAAEAFALHQALLDSDAASQLDPRVRKR-LEAAR 342
Query: 359 TTQDNIKI-LYKVRNEMRAALQRLLKDDKILVIPTVSD--PPLK-LNTKKTYSAEFHDRT 414
+ ++ + LY R ++ L L D +L+ PTV+ PPL L T + + T
Sbjct: 343 SMPASLLVNLYAARERLQEQLT-LELDGALLITPTVAHVAPPLAPLLTDDDLFVQTNLAT 401
Query: 415 LVLSSIGSMSGCCQVAIPIGK-YNEHPISISFITYHGGDKFLLDTVL 460
L L+ GS+ V++P G+ + P + G D LL L
Sbjct: 402 LRLTMPGSLLNMPGVSLPSGRDASGLPTGLLLSAPAGEDARLLRAAL 448
>gi|166365160|ref|YP_001657433.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Microcystis
aeruginosa NIES-843]
gi|166087533|dbj|BAG02241.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Microcystis
aeruginosa NIES-843]
Length = 438
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 114/194 (58%), Gaps = 4/194 (2%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAG+ FA+K++FD++G VT GS RDH A + A+ + L GA +G T +DE+A
Sbjct: 68 LAGVPFAVKNLFDIEGIVTLAGS-KINRDHPVAGQDAIAIQTLEAAGAVLVGATNMDEYA 126
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+G EN HYG NP+ PS + GGSS GSA AVAA LV ALG+DT G VRVPA+ CG+
Sbjct: 127 YGFVTENAHYGATANPRDPSRVSGGSSGGSAAAVAANLVPLALGSDTNGSVRVPAACCGV 186
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP---RRARRLI 249
+G +P+ G VS G+ SLD +G + N + + + + + N P ++
Sbjct: 187 VGLKPTFGRVSRQGLFLFVSSLDHLGFFSGNVADMAAIWGLFAKNNLKAPLNGLEGVKIA 246
Query: 250 FADDIFQLSKVPKL 263
ADD FQ P++
Sbjct: 247 LADDYFQQGAEPEV 260
>gi|388569021|ref|ZP_10155429.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Hydrogenophaga sp.
PBC]
gi|388263798|gb|EIK89380.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Hydrogenophaga sp.
PBC]
Length = 504
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 96/156 (61%), Gaps = 2/156 (1%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R PL G+ A KD+F + + + GS + +++ A VVT L + GA +GK D
Sbjct: 67 RTPLLGVPIAHKDIFVTRDFPSTAGSK--MLEGYQSPFDATVVTKLAQAGAVSLGKLNCD 124
Query: 130 EFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
EFA G + +N YG NP + +PGGSS G+AVAVAA+L+ A GTDT G +R PASF
Sbjct: 125 EFAMGGSNQNSAYGPAHNPWDTTRVPGGSSGGTAVAVAARLLPAATGTDTGGSIRQPASF 184
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNAS 225
CG+ G +P++G S G++ + SLD G +AR+A+
Sbjct: 185 CGVTGIKPTYGRCSRYGMVAFASSLDQAGAMARSAA 220
>gi|302188198|ref|ZP_07264871.1| hypothetical protein Psyrps6_17715 [Pseudomonas syringae pv.
syringae 642]
Length = 457
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 94/154 (61%), Gaps = 3/154 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
P G+ A KD+FDV G VT G+ + + A A V LL ++G +GKT L EF
Sbjct: 72 PFDGVPIAWKDLFDVAGSVTTAGAA-VRNNLSPALLDAPSVGLLARSGMVSLGKTNLSEF 130
Query: 132 AFGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A+ G N H+GTP+NP S IPGGSSSGSAVAVA V A+GTDT G +RVPA+
Sbjct: 131 AYSGLGLNPHFGTPINPNSDSSPRIPGGSSSGSAVAVANGTVPIAMGTDTAGSIRVPAAL 190
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
G++G+R + S GV P + +LD+VG L R+
Sbjct: 191 NGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRS 224
>gi|425457005|ref|ZP_18836711.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 9807]
gi|389801772|emb|CCI19114.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 9807]
Length = 443
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 113/194 (58%), Gaps = 4/194 (2%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAG+ FA+K++FD+KG VT GS RDH A + A+ + L GA +G T +DE+A
Sbjct: 68 LAGVPFAVKNLFDIKGIVTLAGS-KINRDHPAAGQDAIAIQTLEAAGAVLVGATNMDEYA 126
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+G EN HYG NP PS + GGSS GSA AVAA LV ALG+DT G VRVPA+ CG+
Sbjct: 127 YGFVTENAHYGATPNPCDPSRVSGGSSGGSAAAVAANLVPLALGSDTNGSVRVPAACCGV 186
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP---RRARRLI 249
+G +P+ G VS G+ SLD +G + N + + + + + N P ++
Sbjct: 187 VGLKPTFGRVSRQGLFLFVSSLDHLGFFSGNVADMAAIWSLFAKNNLKAPLSGLEGVKIA 246
Query: 250 FADDIFQLSKVPKL 263
ADD FQ P++
Sbjct: 247 LADDYFQQGAEPEV 260
>gi|289628158|ref|ZP_06461112.1| hypothetical protein PsyrpaN_24013 [Pseudomonas syringae pv.
aesculi str. NCPPB 3681]
gi|289649876|ref|ZP_06481219.1| hypothetical protein Psyrpa2_19319 [Pseudomonas syringae pv.
aesculi str. 2250]
gi|422585889|ref|ZP_16660945.1| hypothetical protein PSYAE_29038 [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330871226|gb|EGH05935.1| hypothetical protein PSYAE_29038 [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 457
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 94/154 (61%), Gaps = 3/154 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
P G+ A KD+FDV G VT G+ + + A A V LL ++G +GKT L EF
Sbjct: 72 PFDGVPIAWKDLFDVAGSVTTAGAA-VRNNLSPALLDAPSVGLLARSGMVSLGKTNLSEF 130
Query: 132 AFGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A+ G N H+GTP+NP IPGGSSSGSAVAVA + V A+GTDT G +RVPA+
Sbjct: 131 AYSGLGLNPHFGTPINPNSDGSPRIPGGSSSGSAVAVANRTVPIAMGTDTAGSIRVPAAL 190
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
G++G+R + S GV P + +LD+VG L R+
Sbjct: 191 NGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRS 224
>gi|71733453|ref|YP_276071.1| hypothetical protein PSPPH_3935 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|422598745|ref|ZP_16673001.1| hypothetical protein PLA107_28625 [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|71554006|gb|AAZ33217.1| amidase family protein [Pseudomonas syringae pv. phaseolicola
1448A]
gi|298156763|gb|EFH97854.1| predicted amidase [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|330989018|gb|EGH87121.1| hypothetical protein PLA107_28625 [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 457
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 94/154 (61%), Gaps = 3/154 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
P G+ A KD+FDV G VT G+ + + A A V LL ++G +GKT L EF
Sbjct: 72 PFDGVPIAWKDLFDVAGSVTTAGAA-VRNNLSPALLDAPSVGLLARSGMVSLGKTNLSEF 130
Query: 132 AFGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A+ G N H+GTP+NP IPGGSSSGSAVAVA + V A+GTDT G +RVPA+
Sbjct: 131 AYSGLGLNPHFGTPINPNSDGSPRIPGGSSSGSAVAVANRTVPIAMGTDTAGSIRVPAAL 190
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
G++G+R + S GV P + +LD+VG L R+
Sbjct: 191 NGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRS 224
>gi|443642601|ref|ZP_21126451.1| Amidase superfamily protein [Pseudomonas syringae pv. syringae B64]
gi|443282618|gb|ELS41623.1| Amidase superfamily protein [Pseudomonas syringae pv. syringae B64]
Length = 457
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 93/154 (60%), Gaps = 3/154 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
P G+ A KD+FDV G VT G+ + A A V LL ++G +GKT L EF
Sbjct: 72 PFDGVPIAWKDLFDVAGSVTTAGAA-VRTSLSPALLDAPTVGLLARSGMVSLGKTNLSEF 130
Query: 132 AFGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A+ G N H+GTPVNP S +PGGSSSGSAVAVA V A+GTDT G +RVPA+
Sbjct: 131 AYSGLGLNPHFGTPVNPSSDSSPRVPGGSSSGSAVAVANGTVPIAMGTDTAGSIRVPAAL 190
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
G++G+R + S GV P + +LD+VG L R+
Sbjct: 191 NGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRS 224
>gi|197302921|ref|ZP_03167972.1| hypothetical protein RUMLAC_01649 [Ruminococcus lactaris ATCC
29176]
gi|197298002|gb|EDY32551.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Ruminococcus lactaris ATCC 29176]
Length = 498
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ AIKD ++G +T S + TA V L GA +GKT +DEF
Sbjct: 72 PLAGVPVAIKDNMCIEGQLTTCSSKILS--GFKPTYTAQAVENLKNAGAVILGKTNMDEF 129
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G T E +YG NP +H+PGGSS GS AVAA +ALG+DT G +R P+SFCG
Sbjct: 130 AMGSTTETSYYGPTKNPHNTAHVPGGSSGGSCAAVAACECYYALGSDTGGSIRQPSSFCG 189
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNAS 225
++G +P++GTVS G++ SLD +G +A++ +
Sbjct: 190 VVGLKPTYGTVSRYGLVAYGSSLDQIGPVAKDVA 223
>gi|83951505|ref|ZP_00960237.1| amidase [Roseovarius nubinhibens ISM]
gi|83836511|gb|EAP75808.1| amidase [Roseovarius nubinhibens ISM]
Length = 434
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 124/397 (31%), Positives = 196/397 (49%), Gaps = 47/397 (11%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG +IKD+FDV G+VT G+ + ++ A+ A V L + GA +G T + E
Sbjct: 63 PLAGALVSIKDLFDVAGHVTRAGT-RFMAENAPAKEDAEAVARLRRAGAVIMGHTNMTEL 121
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+ G N HYGTP N + P IPGGSSSG AV+VA L D A+GTDT G +R+PA+F G
Sbjct: 122 AYSGLGLNPHYGTPENARYPGAIPGGSSSGGAVSVAQGLCDIAIGTDTGGSLRIPAAFNG 181
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILH-RVGH-VLLQLNAVEPRRARRLI 249
I+G++P+ +VS G L S+SLD+VG +AR S+ H R+G+ L Q P R
Sbjct: 182 IVGFKPTQASVSRRGCLALSRSLDSVGPMAR--SVAHVRLGYEALKQPTKCTPNALVREF 239
Query: 250 FADDIFQLSKV-PKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSP 308
+ F + + P + T + A +G+ K RA
Sbjct: 240 VIPENFGMEDLEPAVATGFAAAVARIEAAGH-------------------KVSRAS---- 276
Query: 309 ENGTATLKALSSVML-SLQRYEFKTIYEEWVKSAKPRLGYNVFE-RVLEAINTTQDNIKI 366
A+L+A+ S+ + E + YE+ +S + ++F+ RV + ++ +
Sbjct: 277 ---LASLEAMKSLAVWQFSAVECRGEYEDAYQSQR-----DLFDPRVASRMARAEETSAV 328
Query: 367 LYKVRNEMRAALQRLLKDD---KILVIPTVSD-PP--LKLNTKKTYSAEFHDRTLVLSSI 420
Y+ RAAL + + ++L++PTV PP + ++Y + + L +I
Sbjct: 329 GYRQTLNQRAALIEAFEAELAGRVLLMPTVPILPPSFAAMEDDESYG-RVNLQALRNPTI 387
Query: 421 GSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
++ C +++P + I + I HG D LLD
Sbjct: 388 ANVMDGCAISLPYAHGGDW-IGVMMIAGHGRDTALLD 423
>gi|422669252|ref|ZP_16729101.1| hypothetical protein PSYAP_24076 [Pseudomonas syringae pv. aptata
str. DSM 50252]
gi|330981610|gb|EGH79713.1| hypothetical protein PSYAP_24076 [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 457
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 93/154 (60%), Gaps = 3/154 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
P G+ A KD+FDV G VT G+ + A A V LL ++G +GKT L EF
Sbjct: 72 PFDGVPIAWKDLFDVAGSVTTAGAA-VRTSLSPALLDAPTVGLLARSGMVSLGKTNLSEF 130
Query: 132 AFGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A+ G N H+GTPVNP S +PGGSSSGSAVAVA V A+GTDT G +RVPA+
Sbjct: 131 AYSGLGLNPHFGTPVNPSSDSSPRVPGGSSSGSAVAVANGTVPIAMGTDTAGSIRVPAAL 190
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
G++G+R + S GV P + +LD+VG L R+
Sbjct: 191 NGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRS 224
>gi|416014913|ref|ZP_11562630.1| hypothetical protein PsgB076_06135 [Pseudomonas syringae pv.
glycinea str. B076]
gi|320325581|gb|EFW81643.1| hypothetical protein PsgB076_06135 [Pseudomonas syringae pv.
glycinea str. B076]
Length = 459
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 94/154 (61%), Gaps = 3/154 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
P G+ A KD+FDV G VT G+ + + A A V LL ++G +GKT L EF
Sbjct: 74 PFDGVPIAWKDLFDVAGSVTTAGAA-VRNNLSPALLDAPSVGLLARSGMVSLGKTNLSEF 132
Query: 132 AFGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A+ G N H+GTP+NP IPGGSSSGSAVAVA + V A+GTDT G +RVPA+
Sbjct: 133 AYSGLGLNPHFGTPINPNSDGSPRIPGGSSSGSAVAVANRTVPIAMGTDTAGSIRVPAAL 192
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
G++G+R + S GV P + +LD+VG L R+
Sbjct: 193 NGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRS 226
>gi|390440116|ref|ZP_10228468.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis sp. T1-4]
gi|389836482|emb|CCI32592.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis sp. T1-4]
Length = 443
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/207 (40%), Positives = 119/207 (57%), Gaps = 6/207 (2%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAG+ FA+K++FD++G VT GS RDH A + A+ + L GA +G T +DE+A
Sbjct: 68 LAGVPFAVKNLFDIEGIVTLAGS-KINRDHPVAGQDAIAIQPLEAAGAVLVGATNMDEYA 126
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+G EN HYG NP+ PS + GGSS GSA AVAA LV ALG+DT G VRVPA+ CG+
Sbjct: 127 YGFVTENAHYGATPNPRDPSRVSGGSSGGSAAAVAANLVPLALGSDTNGSVRVPAACCGV 186
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP---RRARRLI 249
+G +P+ G VS G+ SLD +G + N + + + + + N P ++
Sbjct: 187 VGLKPTFGRVSRQGLFLFVSSLDHLGFFSDNVADMAAIWSLFAKNNLKAPLNGLEGVKIA 246
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESL 276
ADD FQ P++ I ++ E L
Sbjct: 247 LADDYFQQGAEPEV--IEAVTAIAERL 271
>gi|425434498|ref|ZP_18814967.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 9432]
gi|389676042|emb|CCH94914.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 9432]
Length = 443
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 118/211 (55%), Gaps = 6/211 (2%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAG+ FA+K++FD+KG VT GS RDH A + A+ + L GA +G T +DE+A
Sbjct: 68 LAGVPFAVKNLFDIKGIVTLAGS-KINRDHPAAGQDAIAIQTLEAAGAVLVGATNMDEYA 126
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+G EN HY NP+ PS I GGSS GSA AVAA LV ALG+DT G VRVPA+ CG+
Sbjct: 127 YGFVTENAHYRATPNPRDPSRISGGSSGGSAAAVAANLVPLALGSDTNGSVRVPAACCGV 186
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP---RRARRLI 249
+G +P+ G VS G+ SLD G + N + + + + + N P ++
Sbjct: 187 VGLKPTFGRVSRQGLFLFVSSLDHPGFFSDNVADMAAIWSLFAKNNLKAPLSGLEGVKIA 246
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESLSGYQ 280
ADD FQ +L+ I ++ E L Q
Sbjct: 247 LADDYFQQGA--ELEVIEAVTAIAERLGVSQ 275
>gi|381191321|ref|ZP_09898831.1| amidase [Thermus sp. RL]
gi|380450681|gb|EIA38295.1| amidase [Thermus sp. RL]
Length = 434
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 142/314 (45%), Gaps = 29/314 (9%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R PL GL IKD+F VKG T G+ K A V L + GA KT +
Sbjct: 62 RGPLHGLPLTIKDLFPVKGMPTRAGT---KAPLPPLPEEARAVRRLREAGALLFAKTNMH 118
Query: 130 EFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
E A GITGEN G N P GGSS GSAVAVA + +LGTDT G +R+PA F
Sbjct: 119 EIALGITGENPWTGPVRNAVDPXRQAGGSSGGSAVAVALGIGLASLGTDTGGSIRIPAGF 178
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
G++G++PS+G VS+ G LP S+S D G L R+ R H L + I
Sbjct: 179 NGVVGFKPSYGRVSLEGALPLSRSTDHAGPLTRSV----RDAHFLTE------------I 222
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
A + L P+ T V ++ L G E Q + ++PSL+ + P
Sbjct: 223 LAGESIPLEG-PQNPTFGV---PLDFLEGRLGVEVRKAFQRLLEDLPSLRAEVREVALP- 277
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
L + V L RYE I+E+ +K V E +L + T+ + +
Sbjct: 278 -----LPGVYEVYTRLVRYEAARIHEKALKEHPEGFSPQVREALLAGLALTEKDYRDAVA 332
Query: 370 VRNEMRAALQRLLK 383
R +R L + L+
Sbjct: 333 EREALRLQLVKALR 346
>gi|315499521|ref|YP_004088324.1| amidohydrolase, atze family [Asticcacaulis excentricus CB 48]
gi|315417533|gb|ADU14173.1| amidohydrolase, AtzE family [Asticcacaulis excentricus CB 48]
Length = 440
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 110/197 (55%), Gaps = 13/197 (6%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDH---HEAERTAVVVTLLLKNGATCIGKTVL 128
PLAG+ FA+KD+FDV G VT G+ R H A A VV L GA IG +
Sbjct: 63 PLAGVPFAVKDLFDVAGQVTTAGA----RLHLGAPAASEDAEVVRRLKAAGAILIGTLNM 118
Query: 129 DEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPAS 188
DEFA+G N H+GT NP P+ + GGSS GSA AVAA V +LG+DT G VRVPAS
Sbjct: 119 DEFAYGFATVNAHFGTTQNPHDPARLAGGSSGGSAAAVAAGFVPLSLGSDTNGSVRVPAS 178
Query: 189 FCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ---LNAVEPRRA 245
CG+ G RP+ G V + GV P ++LDTVG AR + L R+ VL EP R
Sbjct: 179 LCGVWGMRPAQGAVPLNGVFPFVEALDTVGPFARGSRDLRRLYEVLAGETLTGGSEPLRV 238
Query: 246 RRLIFADDIFQLSKVPK 262
RL D F + P+
Sbjct: 239 ARL---DGFFARNAAPE 252
>gi|78045871|ref|YP_362046.1| amidase [Xanthomonas campestris pv. vesicatoria str. 85-10]
gi|346723230|ref|YP_004849899.1| amidase [Xanthomonas axonopodis pv. citrumelo F1]
gi|78034301|emb|CAJ21946.1| glu-tRNAGln amidotransferase A subunit [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|346647977|gb|AEO40601.1| amidase [Xanthomonas axonopodis pv. citrumelo F1]
Length = 486
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 98/163 (60%), Gaps = 3/163 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDH-HEAERTAVVVTLLLKNGATCIGKTVLDEF 131
LAG+ F +KD+FDV G VT G+ R H A R A VV L GA +G +DEF
Sbjct: 108 LAGVPFVVKDLFDVAGQVTTAGAA--VRAHCPPASRDAAVVQRLSDAGAVLVGTANMDEF 165
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+G N HYGT NP H+ GGSS GSA AVAA LV FALG+DT G +RVPA+ CG
Sbjct: 166 AYGFATVNAHYGTTANPHDLQHLAGGSSGGSAAAVAAGLVPFALGSDTNGSIRVPAALCG 225
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL 234
I G RP+HG V + GV P +LD G A + + L R+ VL
Sbjct: 226 IYGLRPTHGAVPLDGVFPFVDALDVAGPFATSVADLRRIHEVL 268
>gi|422657056|ref|ZP_16719499.1| hypothetical protein PLA106_06545 [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|331015616|gb|EGH95672.1| hypothetical protein PLA106_06545 [Pseudomonas syringae pv.
lachrymans str. M302278]
Length = 457
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 94/154 (61%), Gaps = 3/154 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
P G+ A KD+FDV G VT G+ + + A A V LL + G +GKT L EF
Sbjct: 72 PFDGVPVAWKDLFDVAGCVTTAGA-TVRNNLSPALLDAPSVGLLARAGMVSLGKTNLSEF 130
Query: 132 AFGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A+ G N H+GTP+NP IPGGSSSGSAVAVAA +V A+GTDT G +R+PA+F
Sbjct: 131 AYSGLGLNPHFGTPINPMSDGSPRIPGGSSSGSAVAVAAGIVPIAMGTDTAGSIRIPAAF 190
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
++G+R + S GV P + +LD+VG L R+
Sbjct: 191 NSLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRS 224
>gi|28871346|ref|NP_793965.1| hypothetical protein PSPTO_4204 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28854597|gb|AAO57660.1| amidase family protein [Pseudomonas syringae pv. tomato str.
DC3000]
Length = 442
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 94/154 (61%), Gaps = 3/154 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
P G+ A KD+FDV G VT G+ + + A A V LL + G +GKT L EF
Sbjct: 57 PFDGVPVAWKDLFDVAGCVTTAGA-TVRNNLSPALLDAPSVGLLARAGMVSLGKTNLSEF 115
Query: 132 AFGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A+ G N H+GTP+NP IPGGSSSGSAVAVAA +V A+GTDT G +R+PA+F
Sbjct: 116 AYSGLGLNPHFGTPINPMSDGSPRIPGGSSSGSAVAVAAGIVPIAMGTDTAGSIRIPAAF 175
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
++G+R + S GV P + +LD+VG L R+
Sbjct: 176 NSLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRS 209
>gi|424069061|ref|ZP_17806509.1| amidase [Pseudomonas syringae pv. avellanae str. ISPaVe013]
gi|407995652|gb|EKG36171.1| amidase [Pseudomonas syringae pv. avellanae str. ISPaVe013]
Length = 457
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 94/154 (61%), Gaps = 3/154 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
P G+ A KD+FDV G VT G+ + + A A V LL ++G +GKT L EF
Sbjct: 72 PFDGVPIAWKDLFDVAGSVTTAGAA-VRTNLSPALLDAPSVGLLARSGMVSLGKTNLSEF 130
Query: 132 AFGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A+ G N H+GTP+NP S IPGGSSSGSAVAVA V A+GTDT G +RVPA+
Sbjct: 131 AYSGLGLNPHFGTPINPGSDSSPRIPGGSSSGSAVAVANGTVPIAMGTDTAGSIRVPAAL 190
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
G++G+R + S GV P + +LD+VG L R+
Sbjct: 191 NGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRS 224
>gi|344300777|gb|EGW31098.1| hypothetical protein SPAPADRAFT_63024 [Spathaspora passalidarum
NRRL Y-27907]
Length = 459
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 115/179 (64%), Gaps = 5/179 (2%)
Query: 66 PPAARQPLAGLKFAIKDVFDVK-GYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIG 124
P + PLAG + KD K G+ T S +++++ A VV+LL + G+ IG
Sbjct: 40 PTTGQGPLAGSTYICKDNIVTKVGFTT---SASKSLENYKSPFNATVVSLLAQAGSKLIG 96
Query: 125 KTVLDEFAFGITGENKHYGTPVNPQMPSH-IPGGSSSGSAVAVAAQLVDFALGTDTIGCV 183
K+ LDEF G + N H+G +NP P +PGGSS GSA AVAA L DF+LGTDT G V
Sbjct: 97 KSNLDEFGMGSSNTNSHFGPTMNPVYPDQRVPGGSSGGSAAAVAAGLADFSLGTDTGGSV 156
Query: 184 RVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
R+PAS+C ++G++PS+G +S GV+P +Q+LDTVG+++++ +++ +V VL + +P
Sbjct: 157 RLPASYCSVIGFKPSYGRISRWGVVPYAQTLDTVGIISKSLNVVRKVFSVLDVYDEKDP 215
>gi|258511317|ref|YP_003184751.1| amidase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM
446]
gi|257478043|gb|ACV58362.1| Amidase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM
446]
Length = 454
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 119/425 (28%), Positives = 199/425 (46%), Gaps = 50/425 (11%)
Query: 68 AARQP-----LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATC 122
AAR P LAG+ ++KD+ D T +G ++ H +RTA+ V L + A
Sbjct: 63 AARFPEGLGTLAGIPISVKDLIDTSFLPTTYGHGRFR--EHVPDRTALCVARLQRAHALI 120
Query: 123 IGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGC 182
IGK L EFAFG+T EN H+G NP+ PS I GGSS GSA +V + ++GTDT G
Sbjct: 121 IGKAHLHEFAFGVTNENPHFGPARNPRDPSRITGGSSGGSAASVVGGMAQASVGTDTGGS 180
Query: 183 VRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNA--- 239
VR+PA+ G +G++PS+G V GVLP + +LD VG LA + V V+ ++
Sbjct: 181 VRIPAALTGCVGFKPSYGLVPTDGVLPLAPTLDHVGTLANSVEDAAIVTAVMAGIDPDTW 240
Query: 240 -VEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSL 298
P A RL +++ +P L +S + +PE +++ L
Sbjct: 241 LSPPSPAGRL-------RVAVIPGL------------VSRFASPE-------VSAWFEGL 274
Query: 299 KG-LRAQSTSPENGTATLKA--LSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLE 355
L+++ T G+ L A ++ ++ E + W+ + G +V ER+ +
Sbjct: 275 THVLQSRGTIELAGSIDLDADEIARHQANILGAEAYATHRAWLAEHRDAYGADVRERLED 334
Query: 356 AINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTY--SAEFHDR 413
+ + R R A++ + +++PT P ++ K + E R
Sbjct: 335 GARVDTASYAESLRFRARFRDAIREVFARYDCILLPTTPIPATRIGEKAVWIHGEERAVR 394
Query: 414 TLV--LSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVN 471
L+ ++ ++SG ++IP G+ + P+ + + GGD LL + + +
Sbjct: 395 PLLTRFTNPWNLSGAPAISIPAGQVSGLPMGLQIVGKPGGDARLLRIARRI------EAD 448
Query: 472 IASNL 476
IAS+L
Sbjct: 449 IASHL 453
>gi|424073501|ref|ZP_17810917.1| amidase [Pseudomonas syringae pv. avellanae str. ISPaVe037]
gi|407995981|gb|EKG36480.1| amidase [Pseudomonas syringae pv. avellanae str. ISPaVe037]
Length = 457
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 94/154 (61%), Gaps = 3/154 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
P G+ A KD+FDV G VT G+ + + A A V LL ++G +GKT L EF
Sbjct: 72 PFDGVPIAWKDLFDVAGSVTTAGAA-VRTNLSPALLDAPSVGLLARSGMVSLGKTNLSEF 130
Query: 132 AFGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A+ G N H+GTP+NP S IPGGSSSGSAVAVA V A+GTDT G +RVPA+
Sbjct: 131 AYSGLGLNPHFGTPINPGSDSSPRIPGGSSSGSAVAVANGTVPIAMGTDTAGSIRVPAAL 190
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
G++G+R + S GV P + +LD+VG L R+
Sbjct: 191 NGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRS 224
>gi|407974857|ref|ZP_11155765.1| amidase [Nitratireductor indicus C115]
gi|407429940|gb|EKF42616.1| amidase [Nitratireductor indicus C115]
Length = 474
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/209 (39%), Positives = 120/209 (57%), Gaps = 5/209 (2%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LA L FA KDVF G++ G G+P R A ++ L GA +G T LD F+
Sbjct: 106 LANLPFAFKDVFFAHGHLPGDGTP--YRFPSRGVEQAPLLERLFAAGAIPVGATNLDPFS 163
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+ TGEN YG P+NP P + GGSSSGS+VAV A +V FA+GTDT G +R+PA+FCG+
Sbjct: 164 YSTTGENPFYGAPINPLDPELLVGGSSSGSSVAVGAGIVPFAIGTDTGGSIRIPAAFCGV 223
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRAR---RLI 249
G++P++G + G++P S S D ++A +A +L RV L+ ++ R+A R+
Sbjct: 224 WGWKPTNGLLDASGLVPLSHSHDCPAIVASDARMLRRVAETLIGKSSPAWRKAESGMRIG 283
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESLSG 278
A ++F S K ++ A S SG
Sbjct: 284 IAQELFAASDADTAKALNRFLAAARSGSG 312
>gi|288960642|ref|YP_003450982.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Azospirillum sp. B510]
gi|288912950|dbj|BAI74438.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Azospirillum sp. B510]
Length = 608
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/157 (49%), Positives = 94/157 (59%), Gaps = 5/157 (3%)
Query: 67 PAARQ--PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIG 124
PA R PL G+ FA+KD DV G T P+ + A TA V LL GA +G
Sbjct: 74 PAERAALPLYGVPFAVKDNIDVAGLPTTAACPE---YTYTATDTATAVQRLLDAGAILVG 130
Query: 125 KTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVR 184
K LD+FA G+ G YG NP P +PGGSSSGSAVAVA+ LV FALGTDT G R
Sbjct: 131 KANLDQFATGLVGVRSPYGVARNPIDPLCVPGGSSSGSAVAVASGLVGFALGTDTAGSGR 190
Query: 185 VPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLA 221
VPA+F I+G +P+ G VS GV+P +SLD V + A
Sbjct: 191 VPAAFTNIVGLKPTKGLVSTAGVVPACRSLDCVSVFA 227
>gi|416028865|ref|ZP_11571754.1| hypothetical protein PsgRace4_25331 [Pseudomonas syringae pv.
glycinea str. race 4]
gi|320327132|gb|EFW83146.1| hypothetical protein PsgRace4_25331 [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 457
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 94/154 (61%), Gaps = 3/154 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
P G+ A KD+FDV G VT G+ + + A A V LL ++G +GKT L EF
Sbjct: 72 PFDGVLIAWKDLFDVAGSVTTAGAA-VRNNLSPALLDAPSVGLLARSGMVSLGKTNLSEF 130
Query: 132 AFGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A+ G N H+GTP+NP IPGGSSSGSAVAVA + V A+GTDT G +RVPA+
Sbjct: 131 AYSGLGLNPHFGTPINPNSDGSPRIPGGSSSGSAVAVANRTVPIAMGTDTAGSIRVPAAL 190
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
G++G+R + S GV P + +LD+VG L R+
Sbjct: 191 NGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRS 224
>gi|419796173|ref|ZP_14321734.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria sicca VK64]
gi|385699759|gb|EIG30035.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Neisseria sicca VK64]
Length = 484
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 88/152 (57%), Gaps = 2/152 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A KD+F G+ + S D+ + TA VV LL G +G+T +DEFA
Sbjct: 68 LTGVPIAYKDIFCQTGWRSACSSK--MLDNFVSPYTATVVQNLLNEGMVTLGRTNMDEFA 125
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G T E YG NP H+PGGSS GSA VAA+L ALG+DT G +R PAS CGI
Sbjct: 126 MGSTNETSFYGATKNPWNLEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGI 185
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
G +P++GTVS G++ + S D G +A+ A
Sbjct: 186 TGIKPTYGTVSRFGMVAYASSFDQAGPMAQTA 217
>gi|422680715|ref|ZP_16738986.1| hypothetical protein PSYTB_10263 [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
gi|331010060|gb|EGH90116.1| hypothetical protein PSYTB_10263 [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
Length = 457
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 94/154 (61%), Gaps = 3/154 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
P G+ A KD+FDV G VT G+ + + A A V LL ++G +GKT L EF
Sbjct: 72 PFDGVPIAWKDLFDVAGSVTTPGA-AVRNNLSPALLDAPSVGLLARSGMVSLGKTNLSEF 130
Query: 132 AFGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A+ G N H+GTP+NP IPGGSSSGSAVAVA + V A+GTDT G +RVPA+
Sbjct: 131 AYSGLGLNPHFGTPINPNSDGSPRIPGGSSSGSAVAVANRTVPIAMGTDTAGSIRVPAAL 190
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
G++G+R + S GV P + +LD+VG L R+
Sbjct: 191 NGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRS 224
>gi|171185088|ref|YP_001794007.1| amidase [Pyrobaculum neutrophilum V24Sta]
gi|170934300|gb|ACB39561.1| Amidase [Pyrobaculum neutrophilum V24Sta]
Length = 403
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/221 (41%), Positives = 122/221 (55%), Gaps = 17/221 (7%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A+KD +V G T G+P K+ ++RTA VV LL GA +GKT + E A
Sbjct: 43 LCGVALAVKDNIEVAGMPTTNGAPYMKK---MSDRTAPVVKTLLSEGAVVVGKTNMHELA 99
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G T N H+G NP P I GGSS GSA AVA D +GTDT G VR+PA+ CG+
Sbjct: 100 LGATNVNPHFGPAKNPHDPGRITGGSSGGSAGAVAVGAADLGIGTDTGGSVRIPAALCGV 159
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAV--EPR---RARR 247
+GY+P +G + GVLP +QSLD VG LAR L V L+AV PR R +R
Sbjct: 160 VGYKPPYGKIPTEGVLPLAQSLDHVGFLARTVKELVDV------LSAVGWAPRGLQRPKR 213
Query: 248 LIFADDIFQLSKVPKL--KTIHVISKAIESLSGYQNPEHMN 286
FA + +S+ + K A+ES+ G ++ E +N
Sbjct: 214 FRFA-VLLGISEPTRYVEKAFWRAVAALESIGGERDEEFLN 253
>gi|148254039|ref|YP_001238624.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Bradyrhizobium sp.
BTAi1]
gi|146406212|gb|ABQ34718.1| putative glutamyl-tRNA(Gln) amidotransferase subunit A
[Bradyrhizobium sp. BTAi1]
Length = 471
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 101/178 (56%), Gaps = 5/178 (2%)
Query: 67 PAARQ--PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIG 124
PA R+ PL G+ F++KD D G+ T P + + + V LL GA IG
Sbjct: 67 PAQREALPLWGIPFSVKDCIDAAGFATTSACPGFS---YLPAANSPSVERLLAAGAILIG 123
Query: 125 KTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVR 184
KT +D+FA G+ G YG NP ++IPGGSSSG+AV+VA+ LV ALGTDT G R
Sbjct: 124 KTNMDQFATGLVGTRSPYGVARNPFDAAYIPGGSSSGAAVSVASGLVSVALGTDTGGSGR 183
Query: 185 VPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
VPA+F I+G +P+ G +S G +P +S++TV + A RV V +A +P
Sbjct: 184 VPAAFNNIVGLKPTRGLISGAGTVPACRSIETVSIFALTVPDARRVFDVARGYDAHDP 241
>gi|421855698|ref|ZP_16288074.1| putative amidase [Acinetobacter radioresistens DSM 6976 = NBRC
102413]
gi|403188923|dbj|GAB74275.1| putative amidase [Acinetobacter radioresistens DSM 6976 = NBRC
102413]
Length = 370
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 118/382 (30%), Positives = 176/382 (46%), Gaps = 40/382 (10%)
Query: 76 LKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGI 135
LK +KD D++G T GS + A A VV L+LK KT L E AFGI
Sbjct: 15 LKVMVKDSIDIRGLRTMAGSKAL-MEVEPALANAEVVDLILKADCVITAKTNLHELAFGI 73
Query: 136 TGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGY 195
TG N +GTPVNP+ P IPGGSSSGSA AVAA L DF+LGTDT G +R+PA+ CG+ G+
Sbjct: 74 TGINPVFGTPVNPKYPDLIPGGSSSGSAAAVAAGLADFSLGTDTGGSIRMPAACCGVFGF 133
Query: 196 RPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIF 255
+PS G VS GV P SLD VG A + V ++ + ++P
Sbjct: 134 KPSFGRVSRKGVYPVQSSLDCVGPFASS------VEMIITAMQIIDPTFKSSE------- 180
Query: 256 QLSKVPKLKTIHV--ISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTA 313
++ PKL ++V S + + Y ++ V P T
Sbjct: 181 KIQHQPKLAVLNVEADSAVWDCVKDYLTQTNLKV-------------------EPVQVTT 221
Query: 314 TLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNE 373
+A + M + YE Y +S K + +V +R+L A TT + ++ V+
Sbjct: 222 FSEAFQAGM-QIINYENWQAYGTLTESGK--ISPDVQQRLLNAAKTTLEQVRQAEDVKAR 278
Query: 374 MRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPI 433
+ LL+ +L++PT+ P ++ + A + LV ++SG + IP+
Sbjct: 279 FTQEIDELLEQYDVLILPTLPQIPPRVAEAENTVAFLNLTALVRPF--NLSGHPALNIPL 336
Query: 434 GKYNEHPISISFITYHGGDKFL 455
P+ + + D+ L
Sbjct: 337 QTMTGMPVGLQLVGRKNADEQL 358
>gi|320334835|ref|YP_004171546.1| amidase [Deinococcus maricopensis DSM 21211]
gi|319756124|gb|ADV67881.1| Amidase [Deinococcus maricopensis DSM 21211]
Length = 388
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 102/174 (58%), Gaps = 8/174 (4%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLA L F+ KD++ V G+ G S R A + +V L GAT +GKT L E
Sbjct: 24 PLADLTFSAKDLYGVPGWPLGGSS----RAALPAVAPSPLVAHLRALGATLVGKTHLHEV 79
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G+TG N GT NP + + GGSSSG+AV+VA VDFALGTDT G +RVPA++CG
Sbjct: 80 ALGVTGANAFGGT-RNPLDATRVAGGSSSGAAVSVATGEVDFALGTDTGGSIRVPAAWCG 138
Query: 192 ILGYRPS--HGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPR 243
++G++P+ H GVLP S + D G LAR+ ++ RV H L + PR
Sbjct: 139 VVGFKPTKGHAAWPTDGVLPLSLTCDHAGPLARDVQVVARV-HGALTDQVITPR 191
>gi|425465376|ref|ZP_18844685.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 9809]
gi|389832377|emb|CCI24026.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 9809]
Length = 443
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/207 (40%), Positives = 118/207 (57%), Gaps = 6/207 (2%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAG+ FA+K++FD++G VT GS RDH A + A+ + L GA +G T +DE+A
Sbjct: 68 LAGVPFAVKNLFDIEGIVTLAGS-KINRDHPVAGQDAIAIQTLEAAGAVLVGATNMDEYA 126
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+G EN HYG NP PS + GGSS GSA AVAA LV ALG+DT G VRVPA+ CG+
Sbjct: 127 YGFVTENAHYGATANPLDPSRVSGGSSGGSAAAVAANLVPLALGSDTNGSVRVPAACCGV 186
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP---RRARRLI 249
+G +P+ G VS G+ SLD +G + N + + + + + N P ++
Sbjct: 187 VGLKPTFGRVSRQGLFLFVSSLDHLGFFSGNVADMAAIWSLFAKNNLKAPLNGLEGVKIA 246
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESL 276
ADD FQ P++ I ++ E L
Sbjct: 247 LADDYFQQGAEPEV--IEAVTAIAERL 271
>gi|417956737|ref|ZP_12599689.1| glutamyl-tRNA amidotransferase subunit A [Neisseria weaveri ATCC
51223]
gi|343970384|gb|EGV38562.1| glutamyl-tRNA amidotransferase subunit A [Neisseria weaveri ATCC
51223]
Length = 484
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 97/186 (52%), Gaps = 2/186 (1%)
Query: 39 RNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDW 98
RNP +NG L E + L G+ A KD+F +G+ + S
Sbjct: 34 RNPAINGYTTLNKELTLAEAKAADERLAAGNAGILTGVPIAFKDIFCQQGWRSACSSK-- 91
Query: 99 KRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGS 158
D+ + TA VV LL G +G+T +DEFA G T E YG NP ++PGGS
Sbjct: 92 MLDNFVSPYTATVVQNLLNEGMVTLGRTNMDEFAMGSTNETSFYGATKNPWNVENVPGGS 151
Query: 159 SSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVG 218
S GSA VAA+L ALG+DT G +R PAS CGI G +P++G VS G++ + S D G
Sbjct: 152 SGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGVVSRFGMVAYASSFDQAG 211
Query: 219 LLARNA 224
+A+ A
Sbjct: 212 PMAQTA 217
>gi|226322860|ref|ZP_03798378.1| hypothetical protein COPCOM_00632 [Coprococcus comes ATCC 27758]
gi|225208646|gb|EEG91000.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Coprococcus comes ATCC 27758]
Length = 496
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ AIKD +G T S + +A V L K GA IGKT +DEF
Sbjct: 70 PLAGVPVAIKDNMCTEGVTTTCSSKILS--NFVPTFSAEAVLNLEKAGAVVIGKTNMDEF 127
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G T E +YG NP H+PGGSS GS AVA V +ALG+DT G +R P+S+CG
Sbjct: 128 AMGSTTETSYYGETKNPWNLEHVPGGSSGGSCAAVATLEVPYALGSDTGGSIRQPSSYCG 187
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNAS 225
I+G +P++GTVS G++ SLD +G +AR+ +
Sbjct: 188 IVGIKPTYGTVSRYGLIAYGSSLDQIGPVARDVT 221
>gi|241759948|ref|ZP_04758048.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A
subunit [Neisseria flavescens SK114]
gi|241319956|gb|EER56352.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A
subunit [Neisseria flavescens SK114]
Length = 482
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 96/186 (51%), Gaps = 2/186 (1%)
Query: 39 RNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDW 98
+NP +NG V E L G+ A KD+F G+ + S
Sbjct: 34 KNPAINGYVTIDQDKTLAEAKAADARIAAGNTTALTGVPVAYKDIFCQTGWRSACSSK-- 91
Query: 99 KRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGS 158
D+ + TA VV LL G +G+T +DEFA G T E YG NP H+PGGS
Sbjct: 92 MLDNFVSPYTATVVQNLLDAGMVTLGRTNMDEFAMGSTNETSFYGATKNPWNLEHVPGGS 151
Query: 159 SSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVG 218
S GSA +AA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D G
Sbjct: 152 SGGSAAVIAARLAPVALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQAG 211
Query: 219 LLARNA 224
+A+ A
Sbjct: 212 PMAQTA 217
>gi|261377509|ref|ZP_05982082.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria cinerea
ATCC 14685]
gi|269146244|gb|EEZ72662.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria cinerea
ATCC 14685]
Length = 481
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 97/187 (51%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACSSK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL G +G+T +DEFA G T E YG NP H+PGG
Sbjct: 92 -MLDNFVSPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNETSFYGATKNPWNLEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L +LG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPASLGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQA 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>gi|354610922|ref|ZP_09028878.1| Amidase [Halobacterium sp. DL1]
gi|353195742|gb|EHB61244.1| Amidase [Halobacterium sp. DL1]
Length = 495
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/221 (42%), Positives = 122/221 (55%), Gaps = 20/221 (9%)
Query: 40 NPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWK 99
+P L+ +F AF+ F L+ PL L A+KD V G G
Sbjct: 53 DPDLSAD-EFNAFVSTFALV--------GDGGPLGDLDLAVKDNVAVAGVPLTAG----V 99
Query: 100 RDHHEA--ERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
R +A ER A VV+ LL GAT +GKT +DE A+G TGE +G NP+ +H+ GG
Sbjct: 100 RAFEDATPERHAPVVSRLLDAGATLVGKTNMDELAYGPTGETGGFGPTRNPRHSAHVAGG 159
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS+GS AVAA LVD ALGTDT G VR+PASFCG++GY+PS G V GV+P + SLD V
Sbjct: 160 SSAGSGAAVAAGLVDAALGTDTGGSVRIPASFCGVVGYKPSAGAVPRAGVVPLAPSLDQV 219
Query: 218 GLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIFQLS 258
G+LA + RV VL P R+ R + +L+
Sbjct: 220 GVLADSVRDAARVADVL-----AGPHRSDRATLGRSVGRLA 255
>gi|440752298|ref|ZP_20931501.1| amidohydrolase, AtzE family protein [Microcystis aeruginosa
TAIHU98]
gi|440176791|gb|ELP56064.1| amidohydrolase, AtzE family protein [Microcystis aeruginosa
TAIHU98]
Length = 443
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 119/211 (56%), Gaps = 6/211 (2%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAG+ FA+K++FD+KG VT GS RDH A + A+ + L GA +G T +DE+A
Sbjct: 68 LAGVPFAVKNLFDIKGIVTLAGS-KINRDHPAAGQDAIAIQTLEAAGAVLVGATNMDEYA 126
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+G EN HY NP+ PS + GGSS GSA AVAA LV ALG+DT G VRVPA+ CG+
Sbjct: 127 YGFVTENAHYRATPNPRDPSRVSGGSSGGSAAAVAANLVPLALGSDTNGSVRVPAACCGV 186
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP---RRARRLI 249
+G +P+ G VS G+ SLD +G + N + + + + + N P ++
Sbjct: 187 VGLKPTFGRVSRQGLFLFVSSLDHLGFFSGNVADMAAIWSLFAKNNLKAPLNGLEGVKIA 246
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESLSGYQ 280
ADD FQ P++ I ++ E L Q
Sbjct: 247 LADDYFQQGAEPEV--IEAVTAIAERLGVSQ 275
>gi|421785303|ref|ZP_16221734.1| glutamyl/Aspartyl-tRNA(Gln/Asp) amidotransferasesubunit A [Serratia
plymuthica A30]
gi|407752567|gb|EKF62719.1| glutamyl/Aspartyl-tRNA(Gln/Asp) amidotransferasesubunit A [Serratia
plymuthica A30]
Length = 449
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 98/153 (64%), Gaps = 3/153 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ ++KD+FDV G T GS A + A VV LL+ GA IGKT + EFA
Sbjct: 70 LDGVPVSVKDLFDVAGEATAAGSRVLAA-APAAAKHAAVVERLLQAGAVVIGKTNMTEFA 128
Query: 133 FGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
+ G N HYGTP NP + IPGGSSSG+AVAVA + ++G+DT G VR+PA+FC
Sbjct: 129 YSGLGINPHYGTPANPWDRAARRIPGGSSSGAAVAVADGMCFGSIGSDTGGSVRIPAAFC 188
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
G+ G++P+ ++ G+LP S SLD++G++A +
Sbjct: 189 GLTGFKPTARRINDGGLLPLSPSLDSIGVIAHD 221
>gi|399018226|ref|ZP_10720410.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. CF444]
gi|398101862|gb|EJL92062.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. CF444]
Length = 447
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 105/186 (56%), Gaps = 6/186 (3%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAGL +IKD+FDV+G VT GS + A A V L GA +G+T + EFA
Sbjct: 68 LAGLPVSIKDLFDVQGEVTAAGS-KALANAPAATADAPAVARLRHAGAILLGRTNMSEFA 126
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
F G N HYGTP NP + GGS+SG AV VA + ALGTDT G +R+P++FCG+
Sbjct: 127 FSGLGLNPHYGTPRNPFDEQRVSGGSTSGGAVTVALDMAVAALGTDTGGSIRIPSAFCGL 186
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL----LQLNAVEPRRARRL 248
G++P+ VS+ G +P S +LD+ G L+R+ V +L L+ +AV P R
Sbjct: 187 TGFKPTARRVSLQGAVPLSTTLDSAGPLSRSVDCCAIVDAILSGEVLETDAV-PLAGLRF 245
Query: 249 IFADDI 254
DD
Sbjct: 246 GVTDDF 251
>gi|254417618|ref|ZP_05031354.1| Amidase, putative [Coleofasciculus chthonoplastes PCC 7420]
gi|196175588|gb|EDX70616.1| Amidase, putative [Coleofasciculus chthonoplastes PCC 7420]
Length = 485
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 176/403 (43%), Gaps = 43/403 (10%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKN-GATCIGKTVLDEF 131
LAG+ IKD +G T S + E T VT LK+ GA +GKT LDEF
Sbjct: 67 LAGIPIGIKDNMCTQGIPTTCASRILENFVPPYEST---VTQKLKDAGAVMVGKTNLDEF 123
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G + E Y NP S +PGGSS GSA AVAA ALG+DT G +R+PASFCG
Sbjct: 124 AMGSSCETSAYQQTANPWDLSRVPGGSSGGSATAVAASECVVALGSDTGGSIRLPASFCG 183
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAV---EPRRARRL 248
I+G +P++G VS G++ + SLD +G R+ V + LNA+ +P + L
Sbjct: 184 IVGMKPTYGLVSRYGLVAYASSLDQIGPFGRS------VEDAAILLNAIAGYDPNDSTSL 237
Query: 249 IFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMN--VGQYIASNVPSLKGLRAQST 306
+ S P LK+ + I+ G E ++ + Q + + + LK L A+
Sbjct: 238 KLEIPDYTKSLQPDLKSKGLKIGIIKETFG----EGLDPVIAQTVQNAIDQLKSLGAEVQ 293
Query: 307 -----------------SPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNV 349
+P +A L V + E + + E + K+ G V
Sbjct: 294 EISCPRFRYGLPAYYIIAPSEASANLARYDGVKYGFRTPEAENLLEMYKKTRAAGFGAEV 353
Query: 350 FERVLEAINTTQDNIKILY-----KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKK 404
R++ Y KVR ++ ++ + +LV PT P K K
Sbjct: 354 KRRIMLGTYALSAGYYDAYYLKAQKVRTLIKQDFEQAFEKVDVLVCPTAPTPAFKAGEKI 413
Query: 405 TYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEH-PISISFI 446
+ + L+ + ++SG ++IP G ++ PI + I
Sbjct: 414 SDPLTMYLSDLMTIPV-NLSGLPGMSIPCGFDDQGLPIGMQLI 455
>gi|291541008|emb|CBL14119.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
[Roseburia intestinalis XB6B4]
Length = 489
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 95/170 (55%), Gaps = 20/170 (11%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGS-------PDWKRDHHEAERTAVVVTLLLKNGATCIG 124
PLAG+ AIKD K +T S P + TA V L K GA +G
Sbjct: 74 PLAGVPVAIKDNMCTKDLLTTCSSKILYNFIPTY---------TAEAVLNLEKAGAVILG 124
Query: 125 KTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVR 184
KT +DEFA G T E YG NP H+PGGSS GS AVAA+ FALG+DT G +R
Sbjct: 125 KTNMDEFAMGSTTETSAYGETKNPWNTEHVPGGSSGGSCAAVAAEECVFALGSDTGGSIR 184
Query: 185 VPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN----ASILHRV 230
P+SFCG+ G +P++GTVS G++ SLD +G +A++ A+IL +
Sbjct: 185 QPSSFCGVTGIKPTYGTVSRYGLIAYGSSLDQIGPVAKDVTDCATILEAI 234
>gi|291536652|emb|CBL09764.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
[Roseburia intestinalis M50/1]
Length = 489
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 95/170 (55%), Gaps = 20/170 (11%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGS-------PDWKRDHHEAERTAVVVTLLLKNGATCIG 124
PLAG+ AIKD K +T S P + TA V L K GA +G
Sbjct: 74 PLAGVPVAIKDNMCTKDLLTTCSSKILYNFIPTY---------TAEAVLNLEKAGAVILG 124
Query: 125 KTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVR 184
KT +DEFA G T E YG NP H+PGGSS GS AVAA+ FALG+DT G +R
Sbjct: 125 KTNMDEFAMGSTTETSAYGETKNPWNTEHVPGGSSGGSCAAVAAEECVFALGSDTGGSIR 184
Query: 185 VPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN----ASILHRV 230
P+SFCG+ G +P++GTVS G++ SLD +G +A++ A+IL +
Sbjct: 185 QPSSFCGVTGIKPTYGTVSRYGLIAYGSSLDQIGPVAKDVTDCATILEAI 234
>gi|240146776|ref|ZP_04745377.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Roseburia
intestinalis L1-82]
gi|257201061|gb|EEU99345.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Roseburia
intestinalis L1-82]
Length = 489
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 95/170 (55%), Gaps = 20/170 (11%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGS-------PDWKRDHHEAERTAVVVTLLLKNGATCIG 124
PLAG+ AIKD K +T S P + TA V L K GA +G
Sbjct: 74 PLAGVPVAIKDNMCTKDLLTTCSSKILYNFIPTY---------TAEAVLNLEKAGAVILG 124
Query: 125 KTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVR 184
KT +DEFA G T E YG NP H+PGGSS GS AVAA+ FALG+DT G +R
Sbjct: 125 KTNMDEFAMGSTTETSAYGETKNPWNTEHVPGGSSGGSCAAVAAEECVFALGSDTGGSIR 184
Query: 185 VPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN----ASILHRV 230
P+SFCG+ G +P++GTVS G++ SLD +G +A++ A+IL +
Sbjct: 185 QPSSFCGVTGIKPTYGTVSRYGLIAYGSSLDQIGPVAKDVTDCATILEAI 234
>gi|17545308|ref|NP_518710.1| amidase [Ralstonia solanacearum GMI1000]
gi|17427600|emb|CAD14119.1| probable amidase protein [Ralstonia solanacearum GMI1000]
Length = 448
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 94/164 (57%), Gaps = 5/164 (3%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERT--AVVVTLLLKNGATCIGKTVLDE 130
LAGL +IKD+FDV G VT GS + H++ T A V L GA +G+T + E
Sbjct: 73 LAGLPVSIKDLFDVAGQVTAAGS---RALAHQSAATSDATAVARLRAAGAVLLGRTNMSE 129
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FAF G N HYGTP P + GGS+SG AV VA + ALGTDT G +R+PA+FC
Sbjct: 130 FAFSGLGLNPHYGTPRTPADGTRAAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPAAFC 189
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL 234
+ G++P+ V M G +P S SLD+ G LA + V VL
Sbjct: 190 ALTGFKPTARRVPMAGGVPLSTSLDSGGPLANSVDCCAIVDAVL 233
>gi|358635180|dbj|BAL22477.1| glutamyl-tRNA(Gln) amidotransferase, subunit A [Azoarcus sp. KH32C]
Length = 488
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ A KDVF +G +T GS + + A VV+LL GA +GKT +DEF
Sbjct: 67 PLTGIPLAHKDVFCTEGLLTTCGSK--MLSNFVSPYDAHVVSLLKTAGAVTLGKTNMDEF 124
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G + EN HYG NP + IPGGSS GSAVAVAA+L A GTDT G VR PA+ G
Sbjct: 125 AMGSSNENSHYGPVKNPWDTTRIPGGSSGGSAVAVAARLAPIATGTDTGGSVRQPAAHTG 184
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNAS 225
+ G +P++G VS G++ + SLD G +A+
Sbjct: 185 VTGIKPTYGIVSRYGMIAYASSLDQGGAFGASAA 218
>gi|241664945|ref|YP_002983305.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Ralstonia
pickettii 12D]
gi|240866972|gb|ACS64633.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Ralstonia pickettii
12D]
Length = 495
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 90/153 (58%), Gaps = 2/153 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ A KDVF +G+ GS ++ + A VV L G +GKT +DEF
Sbjct: 66 PLTGVPIAHKDVFVTRGWRATAGSK--MLGNYTSPFDATVVERLGAAGMVTLGKTNMDEF 123
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G + EN +G NP H+PGGSS GSAVAVAA LV A GTDT G +R PASF G
Sbjct: 124 AMGSSNENSAFGAVKNPWNLEHVPGGSSGGSAVAVAADLVPAATGTDTGGSIRQPASFSG 183
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
I G +P++G VS G++ + SLD G +AR A
Sbjct: 184 ITGIKPTYGRVSRYGMIAFASSLDQGGPMARTA 216
>gi|270264918|ref|ZP_06193182.1| amidase [Serratia odorifera 4Rx13]
gi|270041216|gb|EFA14316.1| amidase [Serratia odorifera 4Rx13]
Length = 449
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/155 (45%), Positives = 99/155 (63%), Gaps = 3/155 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ ++KD+FDV G T GS A + A VV LL+ GA IGKT + EFA
Sbjct: 70 LDGVPVSVKDLFDVAGEATAAGSRVLAA-APAAAKHAAVVERLLQAGAVLIGKTNMTEFA 128
Query: 133 FGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
+ G N HYGTP NP + IPGGSSSG+AVAVA + ++G+DT G VR+PA+FC
Sbjct: 129 YSGLGINPHYGTPANPWDRAARRIPGGSSSGAAVAVADGMCFGSIGSDTGGSVRIPAAFC 188
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNAS 225
G+ G++P+ ++ G+LP S SLD++G++A + +
Sbjct: 189 GLTGFKPTARRINDGGLLPLSPSLDSIGVIAHDVA 223
>gi|146303538|ref|YP_001190854.1| amidase [Metallosphaera sedula DSM 5348]
gi|145701788|gb|ABP94930.1| Amidase [Metallosphaera sedula DSM 5348]
Length = 388
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 102/174 (58%), Gaps = 5/174 (2%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL GL F +KDV + G T GS + +R A++V +L G T +GKT EF
Sbjct: 27 PLTGLTFGVKDVIETSGVRTTAGSRILL--DNVPKRNALIVDRILSMGGTILGKTNTHEF 84
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G T + G NP+ I GGSS GSAVAVA +VD +GTDT G VR+PAS CG
Sbjct: 85 AVGATNTSSVAGPARNPRDRDRISGGSSGGSAVAVALNMVDVGVGTDTGGSVRIPASLCG 144
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRA 245
++G++PS+G M GV+P S SLDT+G L R+ L R VL+ L E ++A
Sbjct: 145 VIGFKPSYGLFPMSGVIPFSWSLDTLGFLTRDHETLWR---VLVALTPAEGKKA 195
>gi|384920003|ref|ZP_10020026.1| amidase, partial [Citreicella sp. 357]
gi|384466121|gb|EIE50643.1| amidase, partial [Citreicella sp. 357]
Length = 164
Score = 120 bits (302), Expect = 1e-24, Method: Composition-based stats.
Identities = 74/151 (49%), Positives = 87/151 (57%), Gaps = 3/151 (1%)
Query: 62 PQPPPP---AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKN 118
P PP P A PLAGL +KD++DV GY TG G P TA + LL
Sbjct: 13 PYPPVPVENAPDGPLAGLTLGVKDIYDVAGYRTGCGCPIRLAMSDIKTATAPAIQALLDA 72
Query: 119 GATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTD 178
GA GK DE A+ + G N H+G PVNP P IPGGSSSGS A A L D +G+D
Sbjct: 73 GAAFNGKLHTDELAWSMYGMNAHFGMPVNPNAPGRIPGGSSSGSGAACAGGLADITVGSD 132
Query: 179 TIGCVRVPASFCGILGYRPSHGTVSMIGVLP 209
T G VR PASFCG G RP+HG +S+ GV+P
Sbjct: 133 TGGSVRAPASFCGTWGIRPTHGLISLDGVMP 163
>gi|261753105|ref|ZP_05996814.1| amidase [Brucella suis bv. 3 str. 686]
gi|261742858|gb|EEY30784.1| amidase [Brucella suis bv. 3 str. 686]
Length = 318
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 158/334 (47%), Gaps = 35/334 (10%)
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
AF + G+N HY P+NP P + GGSSSGSA AVA +L D ALG+DT G +R PASFC
Sbjct: 1 MAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGSIRTPASFC 60
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIF 250
G++G R +HG + + G++P + SLDT+G AR+ ++ +VG VLL +A E
Sbjct: 61 GLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAVLLGDDAQE--------- 111
Query: 251 ADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPEN 310
F+L+++ + + + Y+ A P L+A S
Sbjct: 112 ----FKLTQLLYMPVLEQLLLGQAETDAYR--------AMFAKVRPHFATLKAASQP--- 156
Query: 311 GTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKV 370
T ++ L +Q E + W+ S +LG + +R T D +K
Sbjct: 157 -TLSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGLGIADRFAYGAEMTADMVKNQRAR 215
Query: 371 RNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSA--EFHDRTLVLSSIGSMSGCCQ 428
R + ++ + +L +PTV P T + + A + ++ L L + +SG Q
Sbjct: 216 RARFAEEFEAIIGESAVLALPTV--PGAAPLTGEPFEALQAYREQALRLLCLSGLSGLPQ 273
Query: 429 VAIPIGK------YNEHPISISFITYHGGDKFLL 456
+ +P+G ++ P ISFI G D+ L+
Sbjct: 274 ITLPLGSLRPGGTMHDAPFGISFIGPRGSDRTLI 307
>gi|440742154|ref|ZP_20921483.1| hypothetical protein A988_02191 [Pseudomonas syringae BRIP39023]
gi|440377977|gb|ELQ14611.1| hypothetical protein A988_02191 [Pseudomonas syringae BRIP39023]
Length = 457
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 93/154 (60%), Gaps = 3/154 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
P G+ A KD+FDV G VT G+ + + A A V LL ++G +GKT L EF
Sbjct: 72 PFDGVPIAWKDLFDVAGSVTTAGAA-VRNNLSPALLDAPSVGLLARSGMVSLGKTNLSEF 130
Query: 132 AFGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A+ G N H+GTP+NP IPGGSSSGSAVAVA V A+GTDT G +RVPA+
Sbjct: 131 AYSGLGLNPHFGTPINPNSDGSPRIPGGSSSGSAVAVANGTVPIAMGTDTAGSIRVPAAL 190
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
G++G+R + S GV P + +LD+VG L R+
Sbjct: 191 NGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRS 224
>gi|116694449|ref|YP_728660.1| glutamyl/aspartyl-tRNA(Gln/Asp) amidotransferasesubunit A
[Ralstonia eutropha H16]
gi|113528948|emb|CAJ95295.1| Glutamyl/Aspartyl-tRNA(Gln/Asp) amidotransferasesubunit A
[Ralstonia eutropha H16]
Length = 447
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 180/408 (44%), Gaps = 39/408 (9%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ ++KD+FDV+G VT G+ A A V+ L GA +G+T + EF
Sbjct: 67 PLAGVPVSVKDLFDVQGDVTRAGARVLP--ERAASADAPVIARLRAAGAVFVGRTNMTEF 124
Query: 132 AFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A+ G N HYGTP NP + IPGGSSSG+AV+V + A+G+DT G R+PA+
Sbjct: 125 AYSGVGINPHYGTPRNPYDRQAGRIPGGSSSGAAVSVTDGMALAAIGSDTGGSCRIPAAL 184
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLL-QLNAVEPRRARRL 248
CGI G++P+ V + G +P S S D+VG LA + V V+ ++ P L
Sbjct: 185 CGIAGFKPTARRVPLQGTVPLSPSYDSVGCLANTVACCAAVDAVMAGEVPPAGPAPLAGL 244
Query: 249 IFADDIFQLSKVPKLKTIHVISKAIESLSG----YQNPEHMNVGQYIASNVPSLKGLRAQ 304
A + + + V S+ + LS Q+ + Q + + + GL A
Sbjct: 245 RLAVPTGLVLEGMSDEVAEVFSRTLRRLSAAGALLQDVSFDSWDQL--AGIGANGGLVAA 302
Query: 305 STSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERV-LEAINTTQDN 363
S +G ++ E PR V R+ L D
Sbjct: 303 EASAWHG--------------------SLLAEQADRYDPR----VLSRIRLADGQRAADY 338
Query: 364 IKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLS--SIG 421
+++L + R A L D + V+PTV ++ A F L+L +I
Sbjct: 339 LRMLQRRGELCRQADAELAGFDAV-VLPTVPVVAPRIADLDDDEAFFSTNRLLLRNPAIA 397
Query: 422 SMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQ 469
+M C +++P + + P+ + H D+ LL + + +L+ +
Sbjct: 398 NMLDLCALSVPCHRPGDAPVGLMLFGRHLSDRRLLAIGMGIEGALRHE 445
>gi|257457941|ref|ZP_05623100.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Treponema vincentii
ATCC 35580]
gi|257444654|gb|EEV19738.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Treponema vincentii
ATCC 35580]
Length = 486
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 91/152 (59%), Gaps = 2/152 (1%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
+PL GL FA+KD ++G + S + ++A A V+T L++ GA IG+ +DE
Sbjct: 73 KPLLGLPFAVKDNISIRGKLCTCCSKIL--EGYKAPYNATVITRLIEAGAIPIGRANMDE 130
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FA G + E YG NP S PGGSS GSA VA FALGT+T G VR+PAS+C
Sbjct: 131 FAMGSSTEYSVYGPSRNPVDRSLTPGGSSGGSAAVVAGFQAPFALGTETGGSVRLPASYC 190
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLAR 222
GI G +P++G +S GV+ SLD VGL AR
Sbjct: 191 GIYGLKPTYGAISRYGVVAFGSSLDQVGLFAR 222
>gi|29833239|ref|NP_827873.1| allophanate hydrolase [Streptomyces avermitilis MA-4680]
gi|29610361|dbj|BAC74408.1| putative amidase family protein [Streptomyces avermitilis MA-4680]
Length = 550
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 87/154 (56%), Gaps = 3/154 (1%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R PLAG FA+K DV G T G P + + E A V L GA +G T LD
Sbjct: 48 RLPLAGRLFAVKGNIDVHGLATTAGCPAYA---YLPEADAPAVARLRAAGAIVLGTTNLD 104
Query: 130 EFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
+FA G+ G YG P+ I GGSS+GSAVAVA +VDFALGTDT G RVPA+F
Sbjct: 105 QFATGLVGTRSPYGAVRGAYDPARISGGSSAGSAVAVALGIVDFALGTDTAGSGRVPAAF 164
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
GI+G +P+ G V G +P SLD V + AR
Sbjct: 165 NGIVGLKPTRGLVPTTGTVPACASLDCVTVFART 198
>gi|357023884|ref|ZP_09086051.1| amidase [Mesorhizobium amorphae CCNWGS0123]
gi|355544164|gb|EHH13273.1| amidase [Mesorhizobium amorphae CCNWGS0123]
Length = 432
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 93/152 (61%), Gaps = 1/152 (0%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G +IKD+FDV G T GS + A R AV+V L + GA +GKT + EF
Sbjct: 52 PLDGTIVSIKDLFDVAGEPTTAGSLMLA-NAAPAGRDAVIVRRLRQAGAVILGKTNMTEF 110
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
AF G+N HYG P N S IPGGSSSG+ VAV + ++G+DT G VR+PAS G
Sbjct: 111 AFTAIGDNLHYGIPGNAADASLIPGGSSSGAGVAVGEGTSEVSIGSDTGGSVRIPASLNG 170
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
++G++P+ V G P S++LD++G LAR+
Sbjct: 171 VVGFKPTARRVPRDGAFPLSRTLDSIGPLARS 202
>gi|407711726|ref|YP_006836499.1| amidase [Burkholderia phenoliruptrix BR3459a]
gi|407240409|gb|AFT90606.1| amidase [Burkholderia phenoliruptrix BR3459a]
Length = 446
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 100/162 (61%), Gaps = 5/162 (3%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ F++KD VKG G+P + A+R A +V L GA GK + E
Sbjct: 62 PLFGIPFSLKDNICVKGLPVTAGTP--GMEDCIAKRDASIVRKLKSLGAVVAGKNNMHEL 119
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
+FGIT N +GT VNP P H+ GGSS G A AVAA +V A+GTDT G VR+PASFCG
Sbjct: 120 SFGITSVNPQWGTVVNPAAPEHLAGGSSGGCAAAVAAGIVPIAIGTDTGGSVRIPASFCG 179
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLL---ARNASILHRV 230
I G+RP+ G S G++P S++ D+ GLL A++A +L+ +
Sbjct: 180 ITGFRPTSGRWSSAGIIPVSRTKDSPGLLTKTAKDAQLLYEL 221
>gi|398808504|ref|ZP_10567367.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Variovorax sp. CF313]
gi|398087536|gb|EJL78122.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Variovorax sp. CF313]
Length = 463
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/155 (45%), Positives = 92/155 (59%), Gaps = 5/155 (3%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAGL ++KD++DV G T GS + A A V L GA +GKT + EF
Sbjct: 70 PLAGLPVSVKDLYDVAGETTMAGSAVCAGEA-PAAHDATAVARLRAQGAAIVGKTNMTEF 128
Query: 132 AFGITGENKHYGTPVNP---QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPAS 188
AF G N HYGTP NP Q P IPGGSSSG+AV+VA L LG+DT G +R+PA+
Sbjct: 129 AFSGVGINPHYGTPRNPADAQTP-RIPGGSSSGAAVSVALGLAVAGLGSDTGGSIRIPAA 187
Query: 189 FCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
CG++G++ + V G ++SLDTV +AR+
Sbjct: 188 LCGLVGFKSTQSRVPRTGAFELARSLDTVCAMARS 222
>gi|172063473|ref|YP_001811124.1| amidase [Burkholderia ambifaria MC40-6]
gi|171995990|gb|ACB66908.1| Amidase [Burkholderia ambifaria MC40-6]
Length = 446
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 96/175 (54%), Gaps = 4/175 (2%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG +K FD +G+VT GS D A A +V++L + GA + +T + EF
Sbjct: 65 PLAGAVLTVKACFDCEGWVTHAGSRVLA-DEPPARTDAAMVSMLRRAGAVLVAQTAMTEF 123
Query: 132 AFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A+G G N+ YGTP P + GGSSSG+AV+VA D +LG+DT G R+PA+F
Sbjct: 124 AYGALGVNRAYGTPTTPLDARRERVAGGSSSGAAVSVALGAADLSLGSDTSGSARIPAAF 183
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRR 244
CG+ G++PS G + G+ S S D GLLA L R V L V RR
Sbjct: 184 CGVTGFKPSRGRYASDGMQYLSTSFDVPGLLAATVE-LCRQADVALHGRDVRRRR 237
>gi|374636672|ref|ZP_09708229.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanotorris
formicicus Mc-S-70]
gi|373558227|gb|EHP84581.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanotorris
formicicus Mc-S-70]
Length = 432
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 186/413 (45%), Gaps = 43/413 (10%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
+PL G AIK +VKGY S +++ A A V+ L NGA IG T LDE
Sbjct: 46 KPLYGKIIAIKANINVKGYTISCASKTL--ENYIAPYDATVIKKLKANGALIIGMTNLDE 103
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FA G +GE ++G NP+ IPGGSSSGSA AV+A L D ALG+DT G +R PAS C
Sbjct: 104 FACGSSGETSYFGATKNPKAEDRIPGGSSSGSAAAVSADLCDMALGSDTGGSIRNPASHC 163
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIF 250
G++G++PS+G VS G+ + S D +G + +NA LL N ++ +
Sbjct: 164 GVVGFKPSYGVVSRQGLCDLAMSFDQIGPITKNAE------DALLLTNIIKGKDPSDSTT 217
Query: 251 ADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPEN 310
+ PK + V + + + + + + I + K L +
Sbjct: 218 VE-------TPKFEKESVENYKVGVVKEFMDVADDKIRDKIEKGIEVFKDLGCEIVEL-- 268
Query: 311 GTATLKALSSVMLSLQRYEFKTIYEEWVKSAKP----RLGYNVFE--------RVLEAIN 358
+ V L+L Y + Y E+ + + R GY + E R+L +
Sbjct: 269 ------SYKYVDLALPTY-YLINYVEFFSATRKYDGRRYGYRIEEVCGEEVLRRILIGKH 321
Query: 359 TTQDNIKILY-----KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDR 413
++ Y + RN MR + ++LKD ++V PTV P KL K + +
Sbjct: 322 ISEKEYSGKYYKRALQARNVMRKEMMKILKDVDVIVGPTVPKLPHKLGEKLSPMEMYAYD 381
Query: 414 TLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSL 466
L + + ++ G C +P G N P+ + D+ +L +++ +L
Sbjct: 382 VLTVPT--NICGICAGVVPCGDVNGVPVGLQIQAKSFEDQKVLSAMIEFEKAL 432
>gi|412340038|ref|YP_006968793.1| amidase [Bordetella bronchiseptica 253]
gi|408769872|emb|CCJ54658.1| probable amidase [Bordetella bronchiseptica 253]
Length = 424
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 97/190 (51%), Gaps = 15/190 (7%)
Query: 47 VDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAE 106
VD L + + +P P R+PLAGL A+KD+ D T +GSP + H
Sbjct: 47 VDAAGALRKARAMAGARPDP---RRPLAGLPIAVKDIIDTADMPTAYGSPIYA--GHRPA 101
Query: 107 RTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPV--NPQMPSHIPGGSSSGSAV 164
+A V + G +GKT EFA H P NP P H PGGSS GSA
Sbjct: 102 WSAYCVAAIEAAGGIILGKTATSEFA--------HSAPPATRNPHAPQHTPGGSSGGSAA 153
Query: 165 AVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
VA + AL T T G PA+FCG++GY+PS G + GV P ++SLDTVGL+AR
Sbjct: 154 CVADFMAPAALATQTGGSTIRPAAFCGVVGYKPSLGLIDRTGVKPMAESLDTVGLMARAV 213
Query: 225 SILHRVGHVL 234
+ + + VL
Sbjct: 214 ADIQLLAGVL 223
>gi|410418467|ref|YP_006898916.1| amidase [Bordetella bronchiseptica MO149]
gi|408445762|emb|CCJ57424.1| probable amidase [Bordetella bronchiseptica MO149]
Length = 424
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 94/178 (52%), Gaps = 12/178 (6%)
Query: 67 PAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKT 126
P R+PLAGL A+KD+ D T +GSP + H +A V + G +GKT
Sbjct: 64 PDPRRPLAGLPIAVKDIIDTADMPTAYGSPIYA--GHRPAWSAYCVAAIEAAGGIILGKT 121
Query: 127 VLDEFAFGITGENKHYGTPV--NPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVR 184
EFA H P NP P+H PGGSS GSA VA + AL T T G
Sbjct: 122 ATSEFA--------HSAPPATRNPHAPAHTPGGSSGGSAACVADFMAPAALATQTGGSTI 173
Query: 185 VPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
PA+FCG++GY+PS G + GV P +++LDTVGL+AR + + + VL + A P
Sbjct: 174 RPAAFCGVVGYKPSLGLIDRTGVRPMAEALDTVGLMARAVADIQLLAGVLAGVPASTP 231
>gi|422405004|ref|ZP_16482052.1| hypothetical protein Pgy4_14141, partial [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330879198|gb|EGH13347.1| hypothetical protein Pgy4_14141 [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 325
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 94/154 (61%), Gaps = 3/154 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
P G+ A KD+FDV G VT G+ + + A A V LL ++G +GKT L EF
Sbjct: 74 PFDGVLIAWKDLFDVAGSVTTAGAA-VRNNLSPALLDAPSVGLLARSGMVSLGKTNLSEF 132
Query: 132 AFGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A+ G N H+GTP+NP IPGGSSSGSAVAVA + V A+GTDT G +RVPA+
Sbjct: 133 AYSGLGLNPHFGTPINPNSDGSPRIPGGSSSGSAVAVANRTVPIAMGTDTAGSIRVPAAL 192
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
G++G+R + S GV P + +LD+VG L R+
Sbjct: 193 NGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRS 226
>gi|427812930|ref|ZP_18979994.1| probable amidase [Bordetella bronchiseptica 1289]
gi|410563930|emb|CCN21468.1| probable amidase [Bordetella bronchiseptica 1289]
Length = 424
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 97/190 (51%), Gaps = 15/190 (7%)
Query: 47 VDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAE 106
VD L + + +P P R+PLAGL A+KD+ D T +GSP + H
Sbjct: 47 VDAAGALRKARAMAGARPDP---RRPLAGLPIAVKDIIDTADMPTAYGSPIYA--GHRPA 101
Query: 107 RTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPV--NPQMPSHIPGGSSSGSAV 164
+A V + G +GKT EFA H P NP P H PGGSS GSA
Sbjct: 102 WSAYCVAAIEAAGGIILGKTATSEFA--------HSAPPATRNPHAPQHTPGGSSGGSAA 153
Query: 165 AVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
VA + AL T T G PA+FCG++GY+PS G + GV P ++SLDTVGL+AR
Sbjct: 154 CVADFMAPAALATQTGGSTIRPAAFCGVVGYKPSLGLIDRTGVKPMAESLDTVGLMARAV 213
Query: 225 SILHRVGHVL 234
+ + + VL
Sbjct: 214 ADIQLLAGVL 223
>gi|403050049|ref|ZP_10904533.1| hypothetical protein AberL1_00550 [Acinetobacter bereziniae LMG
1003]
Length = 448
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 123/418 (29%), Positives = 196/418 (46%), Gaps = 59/418 (14%)
Query: 69 ARQPLA---GLKFAIKDVFDVKGYVTGFGSPDWKRDHHE-AERTAVVVTLLLKNGATCIG 124
A PL+ G+ A KD+FDV+G VT GS R HH A++ A V L + G +G
Sbjct: 58 AHAPLSLFDGVPIAWKDLFDVQGTVTTAGSK--TRVHHAVAQQDADGVMQLTRMGMVNLG 115
Query: 125 KTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVR 184
KT L EFA+ G N H+GTP N P IPGGSSSG+A +V ++V ++GTDT G +R
Sbjct: 116 KTNLTEFAYSGLGLNPHFGTPKNVVDPRCIPGGSSSGAATSVGQKIVPISMGTDTAGSIR 175
Query: 185 VPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNAS---ILHRVGHVLLQLNAVE 241
+PASF G++GYR S S GV P + SLD+VG ++R+ +L ++ +Q N
Sbjct: 176 IPASFNGLVGYRSSSSRYSKKGVFPLAASLDSVGPISRSVRDCIVLDQLMLGQIQSNIPS 235
Query: 242 PRRARRL-IFAD-DIFQLSKVPK------LKTIHVISKA-----IESLSGYQNPEHM-NV 287
++R++ I+ D D+ V L+TI ++ +A + + + + + +
Sbjct: 236 QPQSRKMQIYVDLDMLNHPSVQDCVKHNFLQTIEILQQADIGVVYKRIGAFDQAQTLIDS 295
Query: 288 GQYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGY 347
GQ++ G A L +L + EF +
Sbjct: 296 GQWL-------------------GAAEAYTLHEALLHSDQAEF--------------MDQ 322
Query: 348 NVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPP--LKLNTKKT 405
V +R+L A +T + LY++ ++A+L+ L + +L T P L +
Sbjct: 323 RVRKRLLSAKDTLASSQIHLYQMAQHLKASLKTELAEGYLLTPTTAHTAPELAPLEVDEA 382
Query: 406 YSAEFHDRTLVLSSIGSMSGCCQVAIPIG-KYNEHPISISFITYHGGDKFLLDTVLDL 462
+ + TL L+ GS +++P G N +I +Y G D+ LL L +
Sbjct: 383 LFIQTNLNTLRLTMPGSYLDMPSISLPNGTDSNGRSTAILLSSYSGNDQSLLSAALSI 440
>gi|154483459|ref|ZP_02025907.1| hypothetical protein EUBVEN_01162 [Eubacterium ventriosum ATCC
27560]
gi|149735711|gb|EDM51597.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Eubacterium ventriosum ATCC 27560]
Length = 491
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 97/176 (55%), Gaps = 2/176 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ AIKD + +T S + AV+ L K GA IGKT +DEF
Sbjct: 71 PLAGVPVAIKDNMCTRDKLTTCSSKILGNFYPTYSAEAVIN--LEKAGAVIIGKTNMDEF 128
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G T E YG NP H+PGGSS GS AVAA+ +ALG+DT G +R P+SFCG
Sbjct: 129 AMGSTTETSFYGPTKNPWNKEHVPGGSSGGSCAAVAAEECSYALGSDTGGSIRQPSSFCG 188
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
+ G +P++GTVS G++ SLD +G +A++ + + + ++ + +R
Sbjct: 189 VTGIKPTYGTVSRYGLIAYGSSLDQIGPVAKDVTDCTTILETIASYDSKDSTSVKR 244
>gi|319638538|ref|ZP_07993300.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria mucosa
C102]
gi|317400287|gb|EFV80946.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria mucosa
C102]
Length = 482
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 96/186 (51%), Gaps = 2/186 (1%)
Query: 39 RNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDW 98
+NP +NG V E L G+ A KD+F G+ + S
Sbjct: 34 KNPAINGYVTIDQDKTLAEAKAADARIAAGNATALTGVPVAYKDIFCQTGWRSACSSK-- 91
Query: 99 KRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGS 158
D+ + TA VV LL G +G+T +DEFA G T E YG NP H+PGGS
Sbjct: 92 MLDNFVSPYTATVVQNLLDAGMVTLGRTNMDEFAMGSTNETSFYGATKNPWNLEHVPGGS 151
Query: 159 SSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVG 218
S GSA +AA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D G
Sbjct: 152 SGGSAAVIAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQAG 211
Query: 219 LLARNA 224
+A+ A
Sbjct: 212 PMAQTA 217
>gi|33599684|ref|NP_887244.1| amidase [Bordetella bronchiseptica RB50]
gi|33567281|emb|CAE31194.1| probable amidase [Bordetella bronchiseptica RB50]
Length = 424
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 97/190 (51%), Gaps = 15/190 (7%)
Query: 47 VDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAE 106
VD L + + +P P R+PLAGL A+KD+ D T +GSP + H
Sbjct: 47 VDAAGALRKARAMAGARPDP---RRPLAGLPIAVKDIIDTADMPTAYGSPIYA--GHRPA 101
Query: 107 RTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPV--NPQMPSHIPGGSSSGSAV 164
+A V + G +GKT EFA H P NP P H PGGSS GSA
Sbjct: 102 WSAYCVAAIEAAGGIILGKTATSEFA--------HSAPPATRNPHAPQHTPGGSSGGSAA 153
Query: 165 AVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
VA + AL T T G PA+FCG++GY+PS G + GV P ++SLDTVGL+AR
Sbjct: 154 CVADFMAPAALATQTGGSTIRPAAFCGVVGYKPSLGLIDRTGVKPMAESLDTVGLMARAV 213
Query: 225 SILHRVGHVL 234
+ + + VL
Sbjct: 214 ADIQLLAGVL 223
>gi|261380503|ref|ZP_05985076.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria subflava
NJ9703]
gi|284796756|gb|EFC52103.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Neisseria subflava
NJ9703]
Length = 482
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 96/186 (51%), Gaps = 2/186 (1%)
Query: 39 RNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDW 98
+NP +NG V E L G+ A KD+F G+ + S
Sbjct: 34 KNPAINGYVTIDQDKTLAEAKAADARIAAGNATALTGVPVAYKDIFCQTGWRSACSSK-- 91
Query: 99 KRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGS 158
D+ + TA VV LL G +G+T +DEFA G T E YG NP H+PGGS
Sbjct: 92 MLDNFVSPYTATVVQNLLDAGMVTLGRTNMDEFAMGSTNETSFYGATKNPWNLEHVPGGS 151
Query: 159 SSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVG 218
S GSA +AA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D G
Sbjct: 152 SGGSAAVIAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQAG 211
Query: 219 LLARNA 224
+A+ A
Sbjct: 212 PMAQTA 217
>gi|171682542|ref|XP_001906214.1| hypothetical protein [Podospora anserina S mat+]
gi|170941230|emb|CAP66880.1| unnamed protein product [Podospora anserina S mat+]
Length = 601
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 81/133 (60%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ A+KD +D++GY T GSP+ D + T+ V + GA +GK + EF
Sbjct: 183 PLDGVPTAVKDEYDMEGYSTTLGSPNVYADSSTNKTTSWCVQQIEAAGALILGKLSMHEF 242
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
TG N HYGTP NP ++ GGSSSG+A AVAA L+ LG+D G +R+P+S CG
Sbjct: 243 GLDTTGNNPHYGTPRNPHNSNYYTGGSSSGTAYAVAAGLIPIGLGSDGGGSIRIPSSLCG 302
Query: 192 ILGYRPSHGTVSM 204
I G +P+HG +S
Sbjct: 303 IYGLKPTHGRLSF 315
>gi|358062323|ref|ZP_09148969.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Clostridium
hathewayi WAL-18680]
gi|356699452|gb|EHI60966.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Clostridium
hathewayi WAL-18680]
Length = 506
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ AIKD +G +T S ++ TA V L K GA +GKT +DEF
Sbjct: 70 PLAGVPVAIKDNLCTEGLLTTCASRIL--ENFVPSYTAEAVRNLEKAGAVILGKTNMDEF 127
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G T E YG NP H+PGGSS GS AVAA+ +ALG+DT G +R P+S+CG
Sbjct: 128 AMGSTTETSAYGVTRNPWNLEHVPGGSSGGSCAAVAAEECFYALGSDTGGSIRQPSSYCG 187
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNAS 225
++G +P++GTVS G++ SLD +G +A++ +
Sbjct: 188 VVGIKPTYGTVSRYGLVAYGSSLDQIGPIAKDVT 221
>gi|390572286|ref|ZP_10252506.1| Amidase [Burkholderia terrae BS001]
gi|389935770|gb|EIM97678.1| Amidase [Burkholderia terrae BS001]
Length = 379
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 119/354 (33%), Positives = 170/354 (48%), Gaps = 41/354 (11%)
Query: 51 AFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAV 110
AF+ F L PAA+ P AIKD DV GY T G+ D A A
Sbjct: 3 AFISEFTL-----SADPAAQGP----TIAIKDSIDVAGYPT-TGASRSLADAPPAAAHAE 52
Query: 111 VVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQL 170
VV LL G GKT + E AFG+TG N + GTPVNPQ + IPGGSSSGSA AV A+L
Sbjct: 53 VVQRLLDAGWRITGKTNMHELAFGMTGINDYTGTPVNPQDAARIPGGSSSGSASAVGAKL 112
Query: 171 VDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRV 230
VD ALGTDT G +R PA+ CG++G +P+ G VS G +P +LD VG R+ + L V
Sbjct: 113 VDAALGTDTGGSIRGPAACCGVIGLKPTFGRVSRKGAVPRESTLDCVGPFTRDIATL--V 170
Query: 231 GHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQY 290
+ A + A+R+ + ++ +S + +A++ ++G+
Sbjct: 171 DAMAAIAPAFDTNAAKRVNASANVAIVSVDADAAIRQGVERAVQ-IAGF----------- 218
Query: 291 IASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVF 350
AS L L+ + E G A + E + V++ K LG +V
Sbjct: 219 -ASRAIELDHLK---EAFEAGLAVIN-----------VETARAFAHLVETGK--LGADVD 261
Query: 351 ERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKK 404
R+ A TTQ + R AA+ R L++ +LV+PT+ P+ + +
Sbjct: 262 ARLRVAAQTTQAQLDAAEHARRAFTAAVDRALENADVLVLPTLPTLPITIEAAR 315
>gi|295110403|emb|CBL24356.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
[Ruminococcus obeum A2-162]
Length = 491
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 90/154 (58%), Gaps = 2/154 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ AIKD +KG T S ++ + A V+ L K G IGKT +DEF
Sbjct: 70 PLAGVPIAIKDNICIKGKKTTCASRIL--ENFVPQYNAEVIDRLEKAGMIIIGKTNMDEF 127
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G T E YG NP H+PGGSS GS AVAA ALG+DT G +R P+SFCG
Sbjct: 128 AMGSTTETSAYGVTRNPWNTEHVPGGSSGGSCAAVAAGETFMALGSDTGGSIRQPSSFCG 187
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNAS 225
+ G +P++GTVS G++ + SLD +G + +N +
Sbjct: 188 VTGIKPTYGTVSRYGLVAYASSLDQIGPVGKNVA 221
>gi|425448168|ref|ZP_18828147.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 9443]
gi|389731149|emb|CCI04784.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 9443]
Length = 438
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 111/194 (57%), Gaps = 4/194 (2%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAG+ FA+K++FD+KG VT GS RDH A + A+ + L GA +G T +DE+A
Sbjct: 68 LAGVPFAVKNLFDIKGIVTLAGS-KINRDHPAAGQDAIAIQTLEAAGAVLVGATNMDEYA 126
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+G EN HYG NP+ S I GGSS GSA AVAA LV ALG+DT G VRVPA+ CG+
Sbjct: 127 YGFVTENAHYGATPNPRDTSRISGGSSGGSAAAVAANLVPLALGSDTNGSVRVPAACCGV 186
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP---RRARRLI 249
+G +P+ G VS G+ SLD G N + + + + + N P ++
Sbjct: 187 VGLKPTFGRVSRQGLFLFVSSLDHPGFFTANVADMVAIWSLFAKNNLKAPLSGLEGVKIA 246
Query: 250 FADDIFQLSKVPKL 263
ADD FQ P++
Sbjct: 247 LADDYFQQGAEPEV 260
>gi|390991028|ref|ZP_10261303.1| amidohydrolase, AtzE family protein [Xanthomonas axonopodis pv.
punicae str. LMG 859]
gi|372554288|emb|CCF68278.1| amidohydrolase, AtzE family protein [Xanthomonas axonopodis pv.
punicae str. LMG 859]
Length = 486
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 99/163 (60%), Gaps = 3/163 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDH-HEAERTAVVVTLLLKNGATCIGKTVLDEF 131
LAG+ F +KD+FDV G VT G+ R H A R A VV L + GA +G +DEF
Sbjct: 108 LAGVPFVVKDLFDVAGQVTTAGAA--VRAHCAPASRDAAVVQRLGEAGAVLVGTANMDEF 165
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+G N HYGT NP H+ GGSS GSA AVAA LV FALG+DT G +RVPA+ CG
Sbjct: 166 AYGFATVNAHYGTTANPHDDQHLAGGSSGGSAAAVAAGLVPFALGSDTNGSIRVPAALCG 225
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL 234
I G RP+HG V + GV P +LD VG A + + L V VL
Sbjct: 226 IYGLRPTHGAVPLDGVFPFVDALDVVGPFATSVADLRCVYDVL 268
>gi|332285564|ref|YP_004417475.1| amidase [Pusillimonas sp. T7-7]
gi|330429517|gb|AEC20851.1| amidase [Pusillimonas sp. T7-7]
Length = 451
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/171 (42%), Positives = 100/171 (58%), Gaps = 3/171 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAGL IK FDV+G+ T GS A++ + +V+ L ++ A + +T + EF
Sbjct: 56 PLAGLSCTIKACFDVEGWTTHAGSVALL-GAPPAQQDSALVSRLRQSDALILAQTNMTEF 114
Query: 132 AFGITGENKHYGTPVNPQM--PSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A+G G N ++GTP P H+ GGSSSG+AV+VA VDFAL +DT G VR+PA+F
Sbjct: 115 AYGALGLNTYFGTPRTPLCVDGEHVAGGSSSGAAVSVALGFVDFALCSDTSGSVRIPAAF 174
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAV 240
CG +G PS G G+L S S D G++A++ S+ RV L AV
Sbjct: 175 CGAVGMMPSAGRFDTRGMLGLSPSFDVPGIIAKSVSVCTRVYETLCDKPAV 225
>gi|170695011|ref|ZP_02886160.1| Amidase [Burkholderia graminis C4D1M]
gi|170140109|gb|EDT08288.1| Amidase [Burkholderia graminis C4D1M]
Length = 490
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 91/156 (58%), Gaps = 2/156 (1%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R+ L GL +KD + T FG+ RD A A VVT + G +GK L
Sbjct: 83 RRALPGLPIGVKDSYLTMDLPTSFGTA-VARDFKPAT-DAKVVTAMKDAGCVVLGKNNLV 140
Query: 130 EFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
E ++G+TG N HYG NP HI GGSS G A +VAA+LV ALG DT+G +RVPA+
Sbjct: 141 EMSYGLTGLNGHYGQAKNPYNVLHITGGSSCGGAASVAARLVPAALGGDTVGSIRVPAAL 200
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNAS 225
CG++G++P+ G S GV P S +LDT G +AR S
Sbjct: 201 CGVVGFKPTPGRWSGSGVAPISNTLDTTGPIARRVS 236
>gi|452204002|ref|YP_007484135.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit A
[Dehalococcoides mccartyi DCMB5]
gi|452111061|gb|AGG06793.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit A
[Dehalococcoides mccartyi DCMB5]
Length = 486
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 89/154 (57%), Gaps = 2/154 (1%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
+PL G+ A+KDV KG T S ++ A VV L K GA +GKT +DE
Sbjct: 69 RPLTGIPMALKDVLCTKGIRTTCSSK--MLENFVPPYNAHVVDKLAKEGAVLLGKTNMDE 126
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FA G + EN Y T NP +PGGSS GSA VAA F+LG+DT G +R PASFC
Sbjct: 127 FAMGSSTENSAYFTTRNPWNTDKVPGGSSGGSAACVAASEAVFSLGSDTGGSIRQPASFC 186
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
+ GY+PS+G VS G++ + SLD +G ++A
Sbjct: 187 SVTGYKPSYGMVSRYGLVAFASSLDQIGPFTKDA 220
>gi|418520101|ref|ZP_13086151.1| amidase [Xanthomonas axonopodis pv. malvacearum str. GSPB2388]
gi|410704055|gb|EKQ62540.1| amidase [Xanthomonas axonopodis pv. malvacearum str. GSPB2388]
Length = 486
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 99/163 (60%), Gaps = 3/163 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDH-HEAERTAVVVTLLLKNGATCIGKTVLDEF 131
LAG+ F +KD+FDV G VT G+ R H A R A VV L + GA +G +DEF
Sbjct: 108 LAGVPFVVKDLFDVAGQVTTAGA--AVRAHCPPASRDAAVVQRLGEAGAVLVGTANMDEF 165
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+G N HYGT NP H+ GGSS GSA AVAA LV FALG+DT G +RVPA+ CG
Sbjct: 166 AYGFATVNAHYGTTANPHDDQHLAGGSSGGSAAAVAAGLVPFALGSDTNGSIRVPAALCG 225
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL 234
I G RP+HG V + GV P +LD VG A + + L V VL
Sbjct: 226 IYGLRPTHGAVPLDGVFPFVDALDVVGPFATSVADLRCVYDVL 268
>gi|422628880|ref|ZP_16694087.1| hypothetical protein PSYPI_03582 [Pseudomonas syringae pv. pisi
str. 1704B]
gi|330937625|gb|EGH41544.1| hypothetical protein PSYPI_03582 [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 287
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 93/154 (60%), Gaps = 3/154 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
P G+ A KD+FDV G VT G+ + A A V LL ++G +GKT L EF
Sbjct: 29 PFDGVPIAWKDLFDVAGSVTTAGAA-VRTSLSPALLDAPSVGLLARSGMVSLGKTNLSEF 87
Query: 132 AFGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A+ G N H+GTP+NP S +PGGSSSGSAVAVA V A+GTDT G +RVPA+
Sbjct: 88 AYSGLGLNPHFGTPINPSSDSSPRVPGGSSSGSAVAVANGTVPIAMGTDTAGSIRVPAAL 147
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
G++G+R + S GV P + +LD+VG L R+
Sbjct: 148 NGLVGFRSTSRRYSRDGVFPLALTLDSVGPLTRS 181
>gi|73749019|ref|YP_308258.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Dehalococcoides
sp. CBDB1]
gi|109829693|sp|Q3ZYM5.1|GATA_DEHSC RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|73660735|emb|CAI83342.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Dehalococcoides sp.
CBDB1]
Length = 486
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 89/154 (57%), Gaps = 2/154 (1%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
+PL G+ A+KDV KG T S ++ A VV L K GA +GKT +DE
Sbjct: 69 RPLTGIPMALKDVLCTKGIRTTCSSK--MLENFVPPYNAHVVDKLAKEGAVLLGKTNMDE 126
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FA G + EN Y T NP +PGGSS GSA VAA F+LG+DT G +R PASFC
Sbjct: 127 FAMGSSTENSAYFTTRNPWNTDKVPGGSSGGSAACVAASEAVFSLGSDTGGSIRQPASFC 186
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
+ GY+PS+G VS G++ + SLD +G ++A
Sbjct: 187 SVTGYKPSYGMVSRYGLVAFASSLDQIGPFTKDA 220
>gi|398897016|ref|ZP_10647903.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM55]
gi|398177449|gb|EJM65129.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM55]
Length = 373
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/149 (53%), Positives = 95/149 (63%), Gaps = 1/149 (0%)
Query: 75 GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFG 134
G + AIKD D+ GY T GS + D A + A VV +L G +GKT L E AFG
Sbjct: 14 GKRVAIKDSIDIAGYPTCSGSRAFA-DAPAASKNAEVVDAILNAGWQIVGKTNLHELAFG 72
Query: 135 ITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILG 194
+TG N GTPVNPQ P +PGGSSSGSA AVAA L D A+GTDT G VRVPA+ CG+ G
Sbjct: 73 VTGINDWTGTPVNPQAPDRVPGGSSSGSASAVAAGLADIAIGTDTGGSVRVPAACCGVAG 132
Query: 195 YRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
+P++G VS +G P + SLD VG AR
Sbjct: 133 LKPTYGRVSRVGAHPLASSLDCVGPFART 161
>gi|289433014|ref|YP_003462887.1| glutamyl-tRNA(Gln) amidotransferase subunit alpha [Dehalococcoides
sp. GT]
gi|452205501|ref|YP_007485630.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit A
[Dehalococcoides mccartyi BTF08]
gi|288946734|gb|ADC74431.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Dehalococcoides sp.
GT]
gi|452112557|gb|AGG08288.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit A
[Dehalococcoides mccartyi BTF08]
Length = 486
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 89/154 (57%), Gaps = 2/154 (1%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
+PL G+ A+KDV KG T S ++ A VV L K GA +GKT +DE
Sbjct: 69 RPLTGIPMALKDVLCTKGIRTTCSSK--MLENFVPPYNAHVVDKLAKEGAVLLGKTNMDE 126
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FA G + EN Y T NP +PGGSS GSA VAA F+LG+DT G +R PASFC
Sbjct: 127 FAMGSSTENSAYFTTRNPWNTDKVPGGSSGGSAACVAASEAVFSLGSDTGGSIRQPASFC 186
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
+ GY+PS+G VS G++ + SLD +G ++A
Sbjct: 187 SVTGYKPSYGMVSRYGLVAFASSLDQIGPFTKDA 220
>gi|239625353|ref|ZP_04668384.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239519583|gb|EEQ59449.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 498
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 106/209 (50%), Gaps = 33/209 (15%)
Query: 24 SVVGFVVLAETLRRRRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDV 83
S+ +V + E +R ++ GR++ G P+AG+ A+KD
Sbjct: 39 SIHAYVTVDEEGALKRASEVQGRIEAGTLT-----------------GPVAGVPMAVKDN 81
Query: 84 FDVKGYVTGFGS-------PDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGIT 136
KG T S P + TA V L + GA +GKT +DEFA G T
Sbjct: 82 MCTKGLKTTCSSRILYNFIPTY---------TAQAVLNLEQAGAVILGKTNMDEFAMGST 132
Query: 137 GENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYR 196
E +G NP P H+PGGSS GS AVAA +ALG+DT G +R P+SFCG+ G +
Sbjct: 133 TETSAFGVTRNPWNPEHVPGGSSGGSCAAVAAGECFYALGSDTGGSIRQPSSFCGVTGIK 192
Query: 197 PSHGTVSMIGVLPNSQSLDTVGLLARNAS 225
P++GTVS G++ SLD +G +A++ S
Sbjct: 193 PTYGTVSRYGLIAYGSSLDQIGPVAKDVS 221
>gi|399039338|ref|ZP_10734942.1| allophanate hydrolase [Rhizobium sp. CF122]
gi|398062626|gb|EJL54396.1| allophanate hydrolase [Rhizobium sp. CF122]
Length = 609
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 120/424 (28%), Positives = 187/424 (44%), Gaps = 38/424 (8%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
A +PL G+ A+KD DV G T PD+ + A VV LL + GA IGKT
Sbjct: 63 AEAKPLWGIPLAVKDNIDVAGMPTTAACPDYS---YLPTVDATVVRLLKEAGALVIGKTN 119
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
LD+FA G+ G Y P N + +PGGSSSGSAVA A +V FALGTDT G RVPA
Sbjct: 120 LDQFATGLVGVRSPYPIPRNAIDANLVPGGSSSGSAVATAQGIVSFALGTDTAGSGRVPA 179
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
I+G +PS G +S +GV+P ++LD V + A RV + + + +
Sbjct: 180 GLNNIVGLKPSVGALSTMGVIPACRTLDCVSIFALTVDDAWRVFGTVARYDVAD------ 233
Query: 248 LIFADDI--FQLSKVPKLKTIHVISKAIESLSGYQNPE--HMNVGQYIASNVPSLKGLRA 303
++ DI +P + TI +KA G E + N + +A+ G R
Sbjct: 234 -AYSKDIPAAGYGLLPPVLTIGTPAKADRQFFGDAAMEASYENALELLAT-----LGHRL 287
Query: 304 QSTSPENGTATLKALSSVMLSLQRY-EFKTIYEEWVKSAKPRLGYNVFERVLEAINT--T 360
E+ L +RY K ++ S P V ++ A T
Sbjct: 288 VEVPFEDFYKVANLLYEGAWVAERYVAVKAFFDANETSFHP-----VTRKIYGAARTLSA 342
Query: 361 QDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAE---FHDRTLVL 417
D LY ++ ++ +Q ++ +L +PT T ++AE + R
Sbjct: 343 ADAFNGLYALQ-ALKKTVQPIIDSVDLLCVPTAP----SHYTLADFAAEPIRENSRLGTY 397
Query: 418 SSIGSMSGCCQVAIPIGKYNEH-PISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNL 476
++ ++ C +A+P GK + P S++ + G D +++ + V++ +
Sbjct: 398 TNFVNLLDMCGIAVPTGKRTDGLPASVTLLALSGRDSLTAALAREIHQA--AGVSLGATG 455
Query: 477 VPLP 480
PLP
Sbjct: 456 WPLP 459
>gi|262375781|ref|ZP_06069013.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase
[Acinetobacter lwoffii SH145]
gi|262309384|gb|EEY90515.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase
[Acinetobacter lwoffii SH145]
Length = 492
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 89/152 (58%), Gaps = 2/152 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A KD+F +G T GS D+ + A VV G +GK +DEFA
Sbjct: 71 LTGVPIAHKDIFCTQGIKTTAGSK--MLDNFISPYDATVVAKGKAAGLVTLGKVNMDEFA 128
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G T E+ ++G+ NP H+PGGSS GSA VAA L FA GTDT G +R PASFCG+
Sbjct: 129 MGSTSESSYFGSTKNPWALDHVPGGSSGGSAAVVAADLAPFATGTDTGGSIRQPASFCGL 188
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
G +P++G VS G++ + SLD G +AR+A
Sbjct: 189 TGLKPTYGRVSRFGMIAYASSLDQGGPMARSA 220
>gi|255318454|ref|ZP_05359687.1| Asp-trnaasn/glu-trnagln amidotransferase a subunit [Acinetobacter
radioresistens SK82]
gi|262378684|ref|ZP_06071841.1| Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase A subunit
[Acinetobacter radioresistens SH164]
gi|255304446|gb|EET83630.1| Asp-trnaasn/glu-trnagln amidotransferase a subunit [Acinetobacter
radioresistens SK82]
gi|262299969|gb|EEY87881.1| Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase A subunit
[Acinetobacter radioresistens SH164]
Length = 370
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 175/383 (45%), Gaps = 40/383 (10%)
Query: 75 GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFG 134
LK +KD D++G T GS + A A VV L+LK KT L E AFG
Sbjct: 14 ALKVMVKDSIDIRGLRTMAGSKAL-MEVEPALANAEVVDLILKADCVITAKTNLHELAFG 72
Query: 135 ITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILG 194
ITG N +GTPVNP+ P IPGGSSSGSA AVAA L DF+LGTDT G +R+PA+ CG+ G
Sbjct: 73 ITGINPVFGTPVNPKYPDLIPGGSSSGSAAAVAAGLADFSLGTDTGGSIRMPAACCGVFG 132
Query: 195 YRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDI 254
++PS G VS GV P SLD VG A + V ++ + ++P
Sbjct: 133 FKPSFGRVSRKGVYPVQSSLDCVGPFASS------VEMIITAMQIIDPTFKSSE------ 180
Query: 255 FQLSKVPKLKTIHV--ISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGT 312
++ PKL ++V S + + Y ++ V P T
Sbjct: 181 -KIQHQPKLAVLNVEADSAVWDCIKDYLTQTNLKV-------------------EPVQVT 220
Query: 313 ATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRN 372
+A + M + YE Y +S K + +V +R+L A TT + ++ V+
Sbjct: 221 TFSEAFQAGM-QIINYENWQAYGTLTESGK--ISPDVQQRLLNAAKTTLEQVRQAEDVKA 277
Query: 373 EMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIP 432
+ LL+ L++PT+ P ++ + A + LV ++SG + IP
Sbjct: 278 RFTQEIDELLEQYDALILPTLPQIPPRVAEAENTVAFLNLTALVRPF--NLSGHPALNIP 335
Query: 433 IGKYNEHPISISFITYHGGDKFL 455
+ P+ + + D+ L
Sbjct: 336 LQTMTGMPVGLQLVGRKNADEQL 358
>gi|425450214|ref|ZP_18830046.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 7941]
gi|389769070|emb|CCI05998.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Microcystis aeruginosa PCC 7941]
Length = 443
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 112/194 (57%), Gaps = 4/194 (2%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAG+ FA+K++FD+KG VT GS RD+ A + A+ + L GA +G T +DE+A
Sbjct: 68 LAGVPFAVKNLFDIKGIVTLAGS-KINRDNPPARQDAIAIQTLEAAGAVLVGATNMDEYA 126
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+G EN HY NP+ PS I GGSS GSA AVAA LV ALG+DT G VRVPA+ CG+
Sbjct: 127 YGFVTENAHYRATPNPRDPSRISGGSSGGSAAAVAANLVPLALGSDTNGSVRVPAACCGV 186
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP---RRARRLI 249
+G +P+ G VS G+ SLD G + N + + + + + N P ++
Sbjct: 187 VGLKPTFGRVSRQGLFLFVSSLDHPGFFSDNVADMAAIWSLFAKNNLKAPLSGLEGVKIA 246
Query: 250 FADDIFQLSKVPKL 263
ADD FQ P++
Sbjct: 247 LADDYFQQGAEPEV 260
>gi|21241080|ref|NP_640662.1| amidase [Xanthomonas axonopodis pv. citri str. 306]
gi|21106376|gb|AAM35198.1| Glu-tRNAGln amidotransferase A subunit [Xanthomonas axonopodis pv.
citri str. 306]
Length = 470
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 99/163 (60%), Gaps = 3/163 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDH-HEAERTAVVVTLLLKNGATCIGKTVLDEF 131
LAG+ F +KD+FDV G VT G+ R H A R A VV L + GA +G +DEF
Sbjct: 92 LAGVPFVVKDLFDVAGQVTTAGA--AVRAHCPPASRDAAVVQRLGEAGAVLVGTANMDEF 149
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+G N HYGT NP H+ GGSS GSA AVAA LV FALG+DT G +RVPA+ CG
Sbjct: 150 AYGFATVNAHYGTTANPHDDQHLAGGSSGGSAAAVAAGLVPFALGSDTNGSIRVPAALCG 209
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL 234
I G RP+HG V + GV P +LD VG A + + L V VL
Sbjct: 210 IYGLRPTHGAVPLDGVFPFVDALDVVGPFATSVADLRCVYDVL 252
>gi|20804027|emb|CAD31604.1| PUTATIVE AMIDASE PROTEIN [Mesorhizobium loti R7A]
Length = 445
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 117/191 (61%), Gaps = 3/191 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ +A KD+F+ +G T GS +++ + +A + +L GA IGKT L EF
Sbjct: 69 PLDGIPYAAKDMFETRGIRTTGGS--RVLENNVPDTSAAAICMLDAAGAALIGKTNLHEF 126
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+G TGEN+ GT VNP + + GGSSSGSA AVAA +V FALGTDT G VRVPA+ CG
Sbjct: 127 AYGATGENRWAGTVVNPHDETRLAGGSSSGSAAAVAAGIVPFALGTDTGGSVRVPAALCG 186
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQL-NAVEPRRARRLIF 250
I GY+PS+G +S+ GV+P SLD G+LA + L V + +L A +P A R+
Sbjct: 187 IAGYKPSYGLISLDGVIPYCWSLDHAGVLATSVEDLELVVRHIAKLPPATQPSAALRVAL 246
Query: 251 ADDIFQLSKVP 261
+ + + P
Sbjct: 247 VEGFEEKCEEP 257
>gi|218290490|ref|ZP_03494610.1| Amidase [Alicyclobacillus acidocaldarius LAA1]
gi|218239511|gb|EED06706.1| Amidase [Alicyclobacillus acidocaldarius LAA1]
Length = 452
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 181/398 (45%), Gaps = 33/398 (8%)
Query: 67 PAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKT 126
P PLAG+ ++KD+ D T +G ++ H +RTA+ V L + A IGK
Sbjct: 65 PEGLGPLAGIPISVKDLIDTSFLPTTYGHGRFR--EHVPDRTALCVARLQRAHALIIGKA 122
Query: 127 VLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
L EFAFG+T EN H+G NP+ P I GGSS GSA +V + ++GTDT G VR+P
Sbjct: 123 HLHEFAFGVTNENPHFGPARNPRDPGRITGGSSGGSAASVVGGMAQASVGTDTGGSVRIP 182
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRAR 246
A+ G +G++PS+G V GVLP + +LD VG LA + + V + ++P
Sbjct: 183 AALTGCVGFKPSYGLVPTDGVLPLAPTLDHVGTLANS---VEDAAVVTAVMAGIDPDAWL 239
Query: 247 RLIFADDIFQLSKVPKLKTIHV---ISKAIESLSG-YQNPEHMNVGQYIASNVPSLKGLR 302
L + + +P L + +S E L+ QN + + + +V + R
Sbjct: 240 SLPAPGGRLRAAVIPNLVSRFAAPEVSAWFEGLTHVLQNRGTIEITGSVDLDVDEIA--R 297
Query: 303 AQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQD 362
Q+ +L + Y + W+ K G +V ER+ +
Sbjct: 298 HQAN---------------ILGAEAY---ATHRAWLTEHKDAYGADVRERLEDGARVDAA 339
Query: 363 NIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTY--SAEFHDRTLV--LS 418
+ + R R A++ + +++PT P ++ + E R L+ +
Sbjct: 340 SYAESLRFRARFRDAIRDVFAQYDCILLPTTPIPATRIGETTVWINGEERAVRPLLTRFT 399
Query: 419 SIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+ ++SG ++IP G+ + P+ + + GGD L+
Sbjct: 400 NPWNLSGAPAISIPAGQVSGLPMGLQIVGKPGGDAELI 437
>gi|13507976|ref|NP_109925.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Mycoplasma
pneumoniae M129]
gi|377822549|ref|YP_005175475.1| aspartyl/glutamyl-tRNA amidotransferase, A subunit [Mycoplasma
pneumoniae 309]
gi|385326830|ref|YP_005881262.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase
subunit A [Mycoplasma pneumoniae FH]
gi|2492833|sp|P75534.1|GATA_MYCPN RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|1674296|gb|AAB96242.1| Glu-tRNA amidotransferase, subunit A [Mycoplasma pneumoniae M129]
gi|301633219|gb|ADK86773.1| glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A
subunit [Mycoplasma pneumoniae FH]
gi|358640517|dbj|BAL21811.1| aspartyl/glutamyl-tRNA amidotransferase, A subunit [Mycoplasma
pneumoniae 309]
gi|440453403|gb|AGC04162.1| Glu-tRNAGln amidotransferase, A subunit [Mycoplasma pneumoniae
M129-B7]
Length = 478
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 94/160 (58%), Gaps = 2/160 (1%)
Query: 63 QPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATC 122
Q P ++ PL + F +KD KG VT GS + + +A V LL +GA
Sbjct: 50 QAPKNRSKSPLNNIPFVLKDNIATKGIVTTGGSR--FLEDYIPPFSATVFELLNNSGALL 107
Query: 123 IGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGC 182
+GK LDEF G TG + +G +P + IPGGSSSGSA AVA +V F++GTDT
Sbjct: 108 VGKANLDEFGLGGTGLHSGFGFVHHPWNETLIPGGSSSGSAYAVARGIVPFSIGTDTGDS 167
Query: 183 VRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLAR 222
VR PAS C I+G++P++G +S GV P + SLD VG+ AR
Sbjct: 168 VRRPASICNIVGFKPTYGLISRNGVYPYAPSLDHVGIFAR 207
>gi|357383908|ref|YP_004898632.1| allophanate hydrolase [Pelagibacterium halotolerans B2]
gi|351592545|gb|AEQ50882.1| allophanate hydrolase [Pelagibacterium halotolerans B2]
Length = 601
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/160 (45%), Positives = 92/160 (57%), Gaps = 3/160 (1%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
+PL G+ +A+KD DV G T P + D E A VV L GA C+GKT LD+
Sbjct: 63 RPLWGIPYAVKDNIDVAGMPTTAACPAFSYDPGE---DAFVVARLRAAGAICLGKTNLDQ 119
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FA G+ G Y P N P +PGGSSSGSAVAVA + F LGTDT G RVPA+
Sbjct: 120 FATGLVGVRTPYPVPNNAIDPEIVPGGSSSGSAVAVAHGIACFTLGTDTAGSGRVPAALN 179
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRV 230
++G +PS G +S GV+P ++LDTV + A S + V
Sbjct: 180 NLVGLKPSLGLLSARGVVPACRTLDTVSIFAFTVSDAYEV 219
>gi|398995023|ref|ZP_10697914.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM21]
gi|398131079|gb|EJM20407.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM21]
Length = 382
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 159/341 (46%), Gaps = 45/341 (13%)
Query: 74 AGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAF 133
+G + AIKD D+ G+ T GS + D A R A VV +L G +GKT + E AF
Sbjct: 13 SGKRVAIKDSIDIAGHATRSGSRAFA-DAAPATRNADVVDAILDAGWQIVGKTNMHELAF 71
Query: 134 GITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGIL 193
G+TG N GTP+NPQ P +PGGSSSGSA AVA L D A+GTDT G VRVPA+ CGI
Sbjct: 72 GVTGINDWTGTPINPQAPDRVPGGSSSGSAAAVAGGLADIAIGTDTGGSVRVPAACCGIA 131
Query: 194 GYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADD 253
G +P++G VS +G P SLD VG A + + ++ + + P
Sbjct: 132 GLKPTYGRVSRVGAHPAESSLDCVGPFAAD------MADLIAAMQVICPG---------- 175
Query: 254 IFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKG-LRAQSTSPENGT 312
FQ+ +P + +VG P L+ L A +
Sbjct: 176 -FQVQGLPS--------------------SNASVGFLEVDCDPHLQASLGAAADRAGWRR 214
Query: 313 ATLKALSSVMLSLQRYEFKTIYEEWVK----SAKPRLGYNVFERVLEAINTTQDNIKILY 368
+TL+ LS + +E W + K +G +V +R+L A T+ ++
Sbjct: 215 STLR-LSEFEAAFAAGLTVINFENWAAFGHLTGKGLIGADVEQRLLAASRTSAADLAQAE 273
Query: 369 KVRNEMRAALQRLLKDDKILVIPTV-SDPPLKLNTKKTYSA 408
KVR + L+ +L++PT+ S PP + + A
Sbjct: 274 KVRERFSQQVDAALEQFAVLLLPTMPSLPPTLIEARSASKA 314
>gi|407787573|ref|ZP_11134713.1| putative amidase [Celeribacter baekdonensis B30]
gi|407199273|gb|EKE69293.1| putative amidase [Celeribacter baekdonensis B30]
Length = 386
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 153/335 (45%), Gaps = 44/335 (13%)
Query: 75 GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFG 134
G IKD D+ G VTG GS + E AVVV LL G IGK + E AFG
Sbjct: 21 GPTVVIKDCIDIAGTVTGCGSEAFASAAPALEN-AVVVDALLTAGCRIIGKANMHELAFG 79
Query: 135 ITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILG 194
+TG N +GTPVNP P IPGGSSSGSA AVA+ L DFA+GTDT G VR PA CG++G
Sbjct: 80 MTGVNGFHGTPVNPNWPDRIPGGSSSGSAAAVASGLCDFAIGTDTGGSVRQPAICCGVIG 139
Query: 195 YRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPR-RARRLIFADD 253
+P+ G +S G+ P + SLD VG AR+ ++ + A++P L+ A
Sbjct: 140 IKPTFGRISRKGLSPKNSSLDCVGAFARDMDMIETA------MAAMDPTFTPETLVNAPK 193
Query: 254 IFQLSKVPKLKT----IHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
+ ++ P + ++ + A + GY+ H
Sbjct: 194 LTRIKSDPVAEVGDPLVYALMDAYPGM-GYECLPH------------------------- 227
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
+A +++ YE + + P LG ++ +R+ A + T+ +
Sbjct: 228 -----FEAAFQAGMTVISYETAAAFGHLLDEGAP-LGADIHKRLTAARHVTEAQLAEAEA 281
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKK 404
VR A + LL+ LV P + P L+ +
Sbjct: 282 VRTAFTAEVDALLEQYDALVTPALPVIPPTLSEAQ 316
>gi|354598223|ref|ZP_09016240.1| Amidase [Brenneria sp. EniD312]
gi|353676158|gb|EHD22191.1| Amidase [Brenneria sp. EniD312]
Length = 449
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 94/151 (62%), Gaps = 3/151 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ +IKD+FDV G T GS A AVV LL + G +GKT + EFA
Sbjct: 70 LDGVPVSIKDLFDVAGEPTAAGSRVLAAAPPAASHAAVVARLL-QAGVVVVGKTNMTEFA 128
Query: 133 FGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
+ G N HYGTP NP + IPGGSSSG+AVAVA + A+G+DT G VR+PA+FC
Sbjct: 129 YSGLGINPHYGTPANPWDRDARRIPGGSSSGAAVAVADGMCFGAVGSDTGGSVRIPAAFC 188
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLA 221
G+ GY+P+ + G+LP S SLD++G++A
Sbjct: 189 GLTGYKPTARRIDDAGLLPLSPSLDSIGVIA 219
>gi|421138438|ref|ZP_15598501.1| Amidase [Pseudomonas fluorescens BBc6R8]
gi|404510325|gb|EKA24232.1| Amidase [Pseudomonas fluorescens BBc6R8]
Length = 375
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 116/341 (34%), Positives = 160/341 (46%), Gaps = 48/341 (14%)
Query: 74 AGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAF 133
+G + AIKD D+ GY T GS + D A R A VV +L G +GKT L E AF
Sbjct: 13 SGRRVAIKDSIDIAGYPTRSGSRAFA-DAPPATRHAHVVQAVLDAGWQIVGKTSLHELAF 71
Query: 134 GITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGIL 193
G+TG N GTPVNPQ P +PGGSSSGSA AVAA L D A+GTDT G VRVPA+ CGI
Sbjct: 72 GVTGINDWSGTPVNPQAPDRVPGGSSSGSAAAVAAGLADIAIGTDTGGSVRVPAACCGIA 131
Query: 194 GYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL---LQLNAVEPRRARRLIF 250
G +P++G VS G P SLD VG A N L V+ Q A P + + F
Sbjct: 132 GLKPTYGRVSRTGAQPAVSSLDCVGPFAANMQDLIAAMQVICPGFQAQAA-PSGSVPVGF 190
Query: 251 ADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPEN 310
D ++ P LK + A+++ Q H++ +
Sbjct: 191 LD----VACEPWLKA--SLMAAVDAAGWRQQRLHLD----------------------DF 222
Query: 311 GTATLKALSSVMLSLQRYEFKTIYEEWVK----SAKPRLGYNVFERVLEAINTTQDNIKI 366
TA L+ + + E W + K +G +V +R+L A T+ ++
Sbjct: 223 DTAFGAGLTVINV-----------ENWAAFGHLTGKGLIGADVEQRLLAASRTSAADLAE 271
Query: 367 LYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYS 407
VR + L++ +L++PT+ D P L + S
Sbjct: 272 AEVVRTRFSHQVDAALEEFSVLLLPTMPDLPPTLAEARNGS 312
>gi|393760451|ref|ZP_10349261.1| amidase [Alcaligenes faecalis subsp. faecalis NCIB 8687]
gi|393161308|gb|EJC61372.1| amidase [Alcaligenes faecalis subsp. faecalis NCIB 8687]
Length = 451
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 98/155 (63%), Gaps = 3/155 (1%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
+R + GL ++K++ D+ GY+T GS K D AE+ A +V LL+ GA IG T +
Sbjct: 65 SRSLVEGLPMSVKNLHDIAGYITLGGSTVLK-DAEPAEQHATIVERLLRAGAILIGSTNM 123
Query: 129 DEFAFGITGENKHYGTP--VNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
EFAF G N HYGTP V + + IPGGSSSG+ VAVA + F++GTDT G +R+P
Sbjct: 124 TEFAFSGLGINPHYGTPRSVWDRDNARIPGGSSSGAGVAVAQGMSVFSIGTDTGGSIRIP 183
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLA 221
++F G+ G++P+ V G +P S+SLD+ G LA
Sbjct: 184 SAFNGLTGFKPTAERVPSEGTMPLSRSLDSNGPLA 218
>gi|147669785|ref|YP_001214603.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Dehalococcoides
sp. BAV1]
gi|189045247|sp|A5FQ07.1|GATA_DEHSB RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|146270733|gb|ABQ17725.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
[Dehalococcoides sp. BAV1]
Length = 486
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 89/154 (57%), Gaps = 2/154 (1%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
+PL G+ A+KDV KG T S ++ A VV L K GA +GKT +DE
Sbjct: 69 RPLTGIPMALKDVLCTKGIRTTCSSK--MLENFVPPYNAHVVDKLAKEGAVLLGKTNMDE 126
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FA G + EN Y T NP +PGGSS GSA VAA F+LG+DT G +R PASFC
Sbjct: 127 FAMGSSTENSAYFTTRNPWNTDKVPGGSSGGSAACVAASEAVFSLGSDTGGSIRQPASFC 186
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
+ GY+PS+G VS G++ + SLD +G ++A
Sbjct: 187 SVTGYKPSYGMVSRYGLVAFASSLDQIGPFTKDA 220
>gi|225075633|ref|ZP_03718832.1| hypothetical protein NEIFLAOT_00649 [Neisseria flavescens
NRL30031/H210]
gi|224953055|gb|EEG34264.1| hypothetical protein NEIFLAOT_00649 [Neisseria flavescens
NRL30031/H210]
Length = 482
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 96/186 (51%), Gaps = 2/186 (1%)
Query: 39 RNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDW 98
+NP +NG V E L G+ A KD+F G+ + S
Sbjct: 34 KNPAINGYVTIDQDKTLAEAKAADARIAAGNATALTGVPVAYKDIFCQTGWRSACSSK-- 91
Query: 99 KRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGS 158
D+ + TA VV LL G +G+T +DEFA G T E YG NP H+PGGS
Sbjct: 92 MLDNFVSPYTATVVQNLLDAGMVTLGRTNMDEFAMGSTNETSFYGAIKNPWNLEHVPGGS 151
Query: 159 SSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVG 218
S GSA +AA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D G
Sbjct: 152 SGGSAAVIAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQAG 211
Query: 219 LLARNA 224
+A+ A
Sbjct: 212 PMAQTA 217
>gi|344205326|ref|YP_004790468.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
[Mycoplasma putrefaciens KS1]
gi|343957249|gb|AEM68964.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
[Mycoplasma putrefaciens KS1]
Length = 484
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 188/420 (44%), Gaps = 57/420 (13%)
Query: 73 LAGLKFAIKDVFDVK------------GYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGA 120
L G+ + KD F K GYV GF +A V+ L +GA
Sbjct: 67 LCGIPYLAKDNFSTKDIPTSCSSKILEGYVPGF--------------SATVIERLDDSGA 112
Query: 121 TCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTI 180
+GKT LDE G TG + G VNP+ + + GGSSSGSA VA +V FA G+DT
Sbjct: 113 ILLGKTALDELGMGGTGLSSCNGKIVNPRDKARLVGGSSSGSAYLVAKGIVPFATGSDTG 172
Query: 181 GCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAV 240
+R PAS+ GI+G++P++G +S G+LP + SLDT G RN + +
Sbjct: 173 DSIRKPASYNGIVGFKPTYGALSRYGLLPYAPSLDTCGYFTRNVDDMAVLCDASF---GF 229
Query: 241 EPRRARRLIFADDIF--QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSL 298
+P+ + + F QL+ K+ ++ +++L +++++ + + + ++
Sbjct: 230 DPKDFTSIEVNETNFYRQLNNFDNTKSFGYLTNVLDALDQEHKQKYLDLFEQLKTKGYAV 289
Query: 299 KGLR-----AQSTSP-------ENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLG 346
K + + SP G +T L + R E K E K+ + G
Sbjct: 290 KPIDFSQELLDAVSPVYMMISFSEGVSTNANLDGIKFG-SRVEGKDYIEIMTKTRSQKFG 348
Query: 347 YNVFERVL-EAINTTQDN-IKILY---KVRNEMRAALQRLLKD-DKILVIPTVSDPPLKL 400
V R L ++N ++N IK L KVR + A+ ++ + D +L+ P S PL
Sbjct: 349 PVVKRRFLIGSLNLKRENQIKYLIKAKKVRTLINQAIDKVFETVDVLLLPPARSVAPLID 408
Query: 401 NTKK----TYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
++ + EF D L+LS + SG + IP + + P+ I+ T D L
Sbjct: 409 KAEEVDENSSQNEFLDDILILS---NFSGTPSITIPFFEIEKMPVGINITTKAKSDLLTL 465
>gi|333928941|ref|YP_004502520.1| amidase [Serratia sp. AS12]
gi|333933894|ref|YP_004507472.1| amidase [Serratia plymuthica AS9]
gi|386330764|ref|YP_006026934.1| amidase [Serratia sp. AS13]
gi|333475501|gb|AEF47211.1| Amidase [Serratia plymuthica AS9]
gi|333493001|gb|AEF52163.1| Amidase [Serratia sp. AS12]
gi|333963097|gb|AEG29870.1| Amidase [Serratia sp. AS13]
Length = 449
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 98/155 (63%), Gaps = 3/155 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ ++KD+FDV G T GS A + A VV LL+ G IGKT + EFA
Sbjct: 70 LDGVPVSVKDLFDVAGEATAAGS-RLLAAAPAAAKHAAVVERLLQAGTVVIGKTNMTEFA 128
Query: 133 FGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
+ G N HYGTP NP + IPGGSSSG+AVAVA + ++G+DT G VR+PA+FC
Sbjct: 129 YSGLGINPHYGTPANPWDRAARRIPGGSSSGAAVAVADGMCFGSIGSDTGGSVRIPAAFC 188
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNAS 225
G+ G++P+ ++ G+LP S SLD++G++A + +
Sbjct: 189 GLTGFKPTARRINDGGLLPLSPSLDSIGVIAHDVA 223
>gi|218439121|ref|YP_002377450.1| amidohydrolase, AtzE family [Cyanothece sp. PCC 7424]
gi|218171849|gb|ACK70582.1| amidohydrolase, AtzE family [Cyanothece sp. PCC 7424]
Length = 457
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 119/221 (53%), Gaps = 25/221 (11%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ FA+K++FD+ G VT GS +D+ A R A ++ L K GA +G +DE+
Sbjct: 70 PLAGVPFAVKNLFDIAGVVTLAGS-KINQDNSPAIREATALSRLKKAGAILVGALNMDEY 128
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+G EN HYG NP + I GGSS GSA AVA LV F+LG+DT G +RVPA+FCG
Sbjct: 129 AYGFVTENSHYGATPNPLDITRISGGSSGGSAAAVAGDLVTFSLGSDTNGSIRVPAAFCG 188
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPR-------- 243
+ G++P++G +S G S SLD +G AR+ + + + L +PR
Sbjct: 189 LYGFKPTYGRLSRAGTFLFSSSLDHIGPFARS---VRDIATIFDLLQGEDPRDPVCTKRP 245
Query: 244 ------------RARRLIFADDIFQLSKVPK-LKTIHVISK 271
R+ ADD F P+ LK + I++
Sbjct: 246 PHPCLPELDAGIEGVRIAIADDYFSEGAEPEALKAVEAIAE 286
>gi|389714625|ref|ZP_10187200.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acinetobacter
sp. HA]
gi|388609807|gb|EIM38952.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acinetobacter
sp. HA]
Length = 492
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 88/152 (57%), Gaps = 2/152 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A KD+F +G T GS D+ + A VV G +GK +DEFA
Sbjct: 71 LTGVPIAHKDIFCTQGIKTTAGSK--MLDNFISPYDATVVAKGKAAGLVTLGKVNMDEFA 128
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G T E+ ++G NP H+PGGSS GSA VAA L FA GTDT G +R PASFCG+
Sbjct: 129 MGSTSESSYFGATKNPWALDHVPGGSSGGSAAVVAADLAPFATGTDTGGSIRQPASFCGL 188
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
G +P++G VS G++ + SLD G +AR+A
Sbjct: 189 TGLKPTYGRVSRFGMIAYASSLDQGGPMARSA 220
>gi|33595385|ref|NP_883028.1| amidase [Bordetella parapertussis 12822]
gi|33565463|emb|CAE40096.1| probable amidase [Bordetella parapertussis]
Length = 424
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 97/190 (51%), Gaps = 15/190 (7%)
Query: 47 VDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAE 106
VD L + + +P P R+PLAGL A+KD+ D T +GSP + H
Sbjct: 47 VDATGALRKARAMTGARPDP---RRPLAGLPIAVKDIIDTADMPTAYGSPIYA--GHRPA 101
Query: 107 RTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPV--NPQMPSHIPGGSSSGSAV 164
+A V + G +GKT EFA H P NP P H PGGSS GSA
Sbjct: 102 WSAYCVAAIETAGGIILGKTATSEFA--------HSAPPATRNPHAPQHTPGGSSGGSAA 153
Query: 165 AVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
VA + AL T T G PA+FCG++GY+PS G + GV P ++SLDTVGL+AR
Sbjct: 154 CVADFMAPAALATQTGGSTIRPAAFCGVVGYKPSLGLIDRTGVKPMAESLDTVGLMARAV 213
Query: 225 SILHRVGHVL 234
+ + + VL
Sbjct: 214 ADIQLLAGVL 223
>gi|186474731|ref|YP_001863702.1| amidase [Burkholderia phymatum STM815]
gi|184198690|gb|ACC76652.1| Amidase [Burkholderia phymatum STM815]
Length = 446
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 100/162 (61%), Gaps = 5/162 (3%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ F++KD VKG G+P + A+R A +V L GA GK + E
Sbjct: 62 PLFGIPFSLKDNICVKGLPVTAGTP--GMEDCIAKRDASIVRKLKSLGAVVAGKNNMHEL 119
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
+FGIT N +GT VNP P H+ GGSS G A AVAA +V A+GTDT G VR+PA+FCG
Sbjct: 120 SFGITSVNPQWGTVVNPAAPEHLAGGSSGGCAAAVAAGIVPIAIGTDTGGSVRIPAAFCG 179
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLL---ARNASILHRV 230
I G+RP+ G S G++P S++ D+ GLL A++A +L+ +
Sbjct: 180 ITGFRPTSGRWSSAGIIPVSRTKDSPGLLTKTAKDAQLLYEL 221
>gi|115358738|ref|YP_775876.1| amidase [Burkholderia ambifaria AMMD]
gi|115284026|gb|ABI89542.1| Amidase [Burkholderia ambifaria AMMD]
Length = 446
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 98/177 (55%), Gaps = 6/177 (3%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG +K FD +G+VT GS D A A +V++L + GA + +T + EF
Sbjct: 65 PLAGAVLTVKACFDCEGWVTHAGSRVLA-DEPPARTDAAMVSMLRRAGAVLVAQTAMTEF 123
Query: 132 AFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A+G G N+ YGTP P + GGSSSG+AV+VA D +LG+DT G R+PA+F
Sbjct: 124 AYGALGVNRAYGTPTTPLDTRRERVAGGSSSGAAVSVALGAADLSLGSDTSGSARIPAAF 183
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRAR 246
CG+ G++PS G + G+ S S D GLLA + + + L+ + RR R
Sbjct: 184 CGVTGFKPSRGRYASDGMQLLSTSFDVPGLLAATVGLCRQAD---VALHGRDARRRR 237
>gi|153813416|ref|ZP_01966084.1| hypothetical protein RUMOBE_03836 [Ruminococcus obeum ATCC 29174]
gi|149830508|gb|EDM85599.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Ruminococcus obeum ATCC 29174]
Length = 491
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 102/187 (54%), Gaps = 5/187 (2%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ A+KD +KG T S ++ + A V+ L K G IGKT +DEF
Sbjct: 70 PLAGVPIAVKDNICIKGKKTTCASKIL--ENFVPQYNAEVIDRLEKAGMIIIGKTNMDEF 127
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G T E YG NP H+PGGSS GS AVAA ALG+DT G +R P+SFCG
Sbjct: 128 AMGSTTETSAYGVTRNPWNLEHVPGGSSGGSCAAVAAGETFMALGSDTGGSIRQPSSFCG 187
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
+ G +P++GTVS G++ + SLD +G + +N + +L ++ +P+ + L
Sbjct: 188 VTGIKPTYGTVSRYGLVAYASSLDQIGPVGKNVA---DCAALLEVISGHDPKDSTSLDRT 244
Query: 252 DDIFQLS 258
D F S
Sbjct: 245 DLTFSRS 251
>gi|357055701|ref|ZP_09116764.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Clostridium
clostridioforme 2_1_49FAA]
gi|355382087|gb|EHG29193.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Clostridium
clostridioforme 2_1_49FAA]
Length = 507
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 93/163 (57%), Gaps = 2/163 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ AIKD +G T S ++ TA V L + GA +GKT +DEF
Sbjct: 70 PLAGVPVAIKDNMCTEGMRTTCSSRIL--ENFIPAYTAQAVANLEQAGAVILGKTNMDEF 127
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G T E +G NP P H PGGSS GS AVAA +ALG+DT G +R P+SFCG
Sbjct: 128 AMGSTTETSAFGVTRNPWNPEHAPGGSSGGSCAAVAAGECFYALGSDTGGSIRQPSSFCG 187
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL 234
+ G +P++GTVS G++ SLD +G +A++ S V VL
Sbjct: 188 VTGIKPTYGTVSRYGLIAYGSSLDQIGPVAKDVSDCAAVLEVL 230
>gi|398920559|ref|ZP_10659373.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM49]
gi|398167734|gb|EJM55775.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM49]
Length = 374
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/149 (53%), Positives = 95/149 (63%), Gaps = 1/149 (0%)
Query: 75 GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFG 134
G + AIKD D+ G+ T GS + D A + A VV +L G +GKT L E AFG
Sbjct: 14 GKRVAIKDSIDIAGHPTRSGSRAFA-DAPAATKNAEVVDAILDAGWQIVGKTNLHELAFG 72
Query: 135 ITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILG 194
+TG N GTPVNPQ P +PGGSSSGSA AVAA L D A+GTDT G VRVPA+ CGI G
Sbjct: 73 VTGINDWTGTPVNPQAPDRVPGGSSSGSASAVAAGLADIAIGTDTGGSVRVPAACCGIAG 132
Query: 195 YRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
+P++G VS IG P SLD VG AR+
Sbjct: 133 LKPTYGRVSRIGAHPLESSLDCVGPFARS 161
>gi|430810206|ref|ZP_19437321.1| amidase, partial [Cupriavidus sp. HMR-1]
gi|429497440|gb|EKZ95973.1| amidase, partial [Cupriavidus sp. HMR-1]
Length = 419
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/155 (45%), Positives = 94/155 (60%), Gaps = 3/155 (1%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
PLAGL ++KD++D+ G VT S ++D A A VV L GA +G+T + E
Sbjct: 34 HPLAGLPVSVKDLYDIAGEVTRAASA-ARQDAVPATADATVVARLRAAGAALVGRTNMTE 92
Query: 131 FAFGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPAS 188
FAF G N H+GTPVNP S IPGGSSSG+AV+VA LG+DT G +R+PA+
Sbjct: 93 FAFSGVGINPHFGTPVNPCDSSVARIPGGSSSGAAVSVAIGTAVAGLGSDTGGSIRIPAA 152
Query: 189 FCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
CGI+G++P+ V + G P S +LDT +AR
Sbjct: 153 LCGIVGFKPTSRRVPLTGAFPLSYTLDTACAMART 187
>gi|381205032|ref|ZP_09912103.1| allophanate hydrolase [SAR324 cluster bacterium JCVI-SC AAA005]
Length = 602
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 96/179 (53%), Gaps = 3/179 (1%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
+PL G+ F IKD DV G T P + + ++ + VV +L GA IGKT LD+
Sbjct: 66 KPLWGIPFVIKDNIDVSGIPTTAACPAFA---YTPKKDSFVVNKILTAGALLIGKTNLDQ 122
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FA G+ G Y P N IPGGSSSGSAVAVA L FALGTDT G RVPA+
Sbjct: 123 FATGLVGTRTPYTPPKNTFNKEIIPGGSSSGSAVAVAQGLASFALGTDTAGSGRVPAALN 182
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
I+G +P+ G +S GV+P ++LDT+ A + V V + +P + I
Sbjct: 183 NIVGLKPTLGALSNSGVVPACRTLDTISTFALTVQDAYEVYEVAASYDRSDPFSKKTTI 241
>gi|346970743|gb|EGY14195.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Verticillium dahliae
VdLs.17]
Length = 720
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 107/192 (55%), Gaps = 12/192 (6%)
Query: 51 AFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAV 110
A E+++ P P PL G+ F +KD DV G T P + + + TA+
Sbjct: 307 ALAEKYKEKPLP---------PLFGVPFGVKDSIDVAGVETTAACPSYA---YVPKATAI 354
Query: 111 VVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQL 170
V +L G +GKT LD+ A G++G YG P + I GGSSSG VAVAA+L
Sbjct: 355 CVQHILDAGGIYVGKTNLDQLATGLSGCRSPYGVPHSTFSKDLIAGGSSSGGCVAVAARL 414
Query: 171 VDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRV 230
V F + TDT G RVPA+F G++G++P+ GT+S G++P ++LD++ ++A + + V
Sbjct: 415 VPFTVATDTAGSGRVPAAFNGVVGFKPTKGTISARGLVPACKTLDSIAIVATSVADARAV 474
Query: 231 GHVLLQLNAVEP 242
V+ + + +P
Sbjct: 475 WRVIAKHDKADP 486
>gi|18312690|ref|NP_559357.1| Glu-tRNA(Gln) amidotransferase subunit A (gatA) [Pyrobaculum
aerophilum str. IM2]
gi|18160166|gb|AAL63539.1| Glu-tRNA(Gln) amidotransferase subunit A (gatA) [Pyrobaculum
aerophilum str. IM2]
Length = 399
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/287 (36%), Positives = 144/287 (50%), Gaps = 34/287 (11%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L GL A+KD +V G G+P K+ A++TA VV L+ GA IGKT + E A
Sbjct: 42 LCGLAVAVKDNIEVAGMPITNGAPYMKK---MADKTAPVVRRLIAEGAVVIGKTNMHELA 98
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G T N H+G NP PS I GGSS GSA AVA + D +GTDT G VR+PA+ CG+
Sbjct: 99 LGATNVNPHFGPTRNPHDPSRITGGSSGGSAGAVAIGVADLGIGTDTGGSVRIPAALCGV 158
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAV-----EPRRARR 247
+GY+P +G + GVLP +QSLD VG + R + L R+ L+A E R R
Sbjct: 159 VGYKPPYGKIPTEGVLPLAQSLDHVGFITRTVADLIRI------LSAAGWGPSELPRPNR 212
Query: 248 LIFADDIFQLSKVPKLKTIHV---ISKAI---ESLSGYQNPEHMNVGQYIASNVPSLKG- 300
FA + +S+ T HV KA+ ES+ G ++ + G+Y A+ L
Sbjct: 213 FRFA-VLMGISE----NTKHVEKAFWKAVGILESIGGMRDEVFIETGRYAAARAAILLSE 267
Query: 301 --------LRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVK 339
LR + N ATL + + + ++ K + EE K
Sbjct: 268 AAANYYDYLRGAAEHMGNDVATLLSTGAALPAVAYITAKRVKEEATK 314
>gi|171912162|ref|ZP_02927632.1| putative Amidase [Verrucomicrobium spinosum DSM 4136]
Length = 425
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 98/164 (59%), Gaps = 7/164 (4%)
Query: 63 QPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATC 122
+PPP + +K A+KD+ DVKG VT GS + A++ AV + + +
Sbjct: 40 RPPPEGSHY----VKVAVKDLIDVKGEVTTAGSEYLYKHAAPAQQDAVCMRPVRQRNVWI 95
Query: 123 IGKTVLDEFAFGITGENKHYGTPVNPQMPSH--IPGGSSSGSAVAVAAQLVDFALGTDTI 180
+GKT L+E A G+TG N ++GTP N +PGGSSSGSAVAVA D A+GTDT
Sbjct: 96 VGKTNLNELALGVTGINHYFGTPKNHLAGERRLMPGGSSSGSAVAVANGKADIAIGTDTA 155
Query: 181 GCVRVPASFCGILGYRPSHGTVSMIGVLPNS-QSLDTVGLLARN 223
G +R P++ CGI G + + G +S+ GV P S + LDTVG +A N
Sbjct: 156 GSIRTPSACCGIFGLKTTKGLISLKGVHPISPKHLDTVGPMANN 199
>gi|298293725|ref|YP_003695664.1| allophanate hydrolase [Starkeya novella DSM 506]
gi|296930236|gb|ADH91045.1| allophanate hydrolase [Starkeya novella DSM 506]
Length = 602
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 144/290 (49%), Gaps = 31/290 (10%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
+PL G+ +A+KD DV T PD+ + AE A VV L GA C+GKT LD+
Sbjct: 72 RPLWGIPYAVKDNIDVARMPTTAACPDFT---YVAEADAAVVARLRAMGAICLGKTNLDQ 128
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FA G+ G Y P N P +PGGSSSGSAVAVA +L FALGTDT G RVPA+
Sbjct: 129 FATGLVGVRTPYPVPRNAVDPKLVPGGSSSGSAVAVARRLAVFALGTDTAGSGRVPAALN 188
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRR----AR 246
I+G +PS G +S IG++P +SLDTV + A + + + + +A +P A+
Sbjct: 189 DIVGLKPSLGALSSIGMVPACRSLDTVSIFAGSVAEAWELFELTAFYDAADPWSQALPAQ 248
Query: 247 RL--------IFADDIFQL-------------SKVPKLKTIHVISKAIESLSGYQNPEHM 285
RL + D L + + KL+ + I+ Y E +
Sbjct: 249 RLSPPPPRFRVAVPDALSLRTYGDEAQAAHFRATIAKLQAGGAEVREIDFSPFYAVAELL 308
Query: 286 NVGQYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYE-FKTIY 334
G ++A V ++ Q +PE T +A+ ++ LSL + FK +Y
Sbjct: 309 YSGPWVAERVAAVGARVTQ--APETLHPTTRAILNLGLSLTAVDAFKGLY 356
>gi|358379648|gb|EHK17328.1| hypothetical protein TRIVIDRAFT_205920 [Trichoderma virens Gv29-8]
Length = 715
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/171 (46%), Positives = 107/171 (62%), Gaps = 3/171 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ FA+KD D+KG VT + A TA + LL GA IGK LD+
Sbjct: 319 PLFGIPFAVKDNIDIKGVVTTVACDSFAY---TATATAPAIQHLLDAGAIYIGKLNLDQL 375
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G+TG YG P + HI GGSSSGS++AVAA LV FA+GTDT G VR PA+F G
Sbjct: 376 ATGLTGCRSPYGIPHSYYSKRHISGGSSSGSSIAVAAGLVSFAIGTDTAGSVRAPAAFSG 435
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
++G++P+ GT+S G +P QSLDT+G+LA + S +V +V+ Q + ++P
Sbjct: 436 VVGFKPTKGTISARGAVPACQSLDTLGILAPSLSDARQVWYVMDQHDHLDP 486
>gi|266622511|ref|ZP_06115446.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium
hathewayi DSM 13479]
gi|288865766|gb|EFC98064.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Clostridium
hathewayi DSM 13479]
Length = 527
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ A+KD ++G T S ++ TA V L K GA IGKT +DEF
Sbjct: 73 PLAGVPAAVKDNMCIEGMRTTCSSKIL--ENFVPTYTAEAVENLRKAGAVIIGKTNMDEF 130
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G T E +G NP H+PGGSS GS AVAA +ALG+DT G +R P+SFCG
Sbjct: 131 AMGSTTETSAFGVTRNPWNTDHVPGGSSGGSCAAVAANECFYALGSDTGGSIRQPSSFCG 190
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNAS 225
+ G +P++GT+S G++ SLD +G +A++ +
Sbjct: 191 VTGLKPTYGTISRYGLIAYGSSLDQIGPVAKDVT 224
>gi|194292556|ref|YP_002008463.1| amidase [Cupriavidus taiwanensis LMG 19424]
gi|193226460|emb|CAQ72409.1| putative amidase [Cupriavidus taiwanensis LMG 19424]
Length = 451
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 96/156 (61%), Gaps = 1/156 (0%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ F +K++ DV+G+ T G+ + A R A V L GA + +DE+
Sbjct: 69 PLAGVPFVVKNLLDVRGHATLAGAAP-RAQEPAATRHADAVEALAAAGAVPVALASMDEY 127
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G TGEN G NP P+ I GGSS+G+A VAA +V F LG+DT G +R PA+FCG
Sbjct: 128 ACGATGENVIGGPVRNPLDPARITGGSSAGTAALVAAGVVPFGLGSDTNGSIRAPAAFCG 187
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASIL 227
I G RP+ G +S+ G +P +QSLDTVG +A +A L
Sbjct: 188 IWGLRPTTGRLSLAGCVPYAQSLDTVGPMAGSAGDL 223
>gi|448121630|ref|XP_004204258.1| Piso0_000090 [Millerozyma farinosa CBS 7064]
gi|358349797|emb|CCE73076.1| Piso0_000090 [Millerozyma farinosa CBS 7064]
Length = 482
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 128/442 (28%), Positives = 204/442 (46%), Gaps = 62/442 (14%)
Query: 71 QPLAGLKFAIKDVFDV-KGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
+PL+G F KD +GY T ++ + A V+ L G+ IGK LD
Sbjct: 49 KPLSGTSFVAKDNIAFPQGYTT---CASKALSNYRSPFKATVIQSLEDAGSDLIGKANLD 105
Query: 130 EFAFGITGENKHYGTPVNPQMPSH--IPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
EF G + ++G +NP + I GGSS GSA AV ++ FALGTDT G VR+PA
Sbjct: 106 EFGMGSSNVESYFGAVINPAFANEKRIAGGSSGGSAAAVRSEASTFALGTDTGGSVRLPA 165
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
++ G++G++P++G VS GV+P +Q+LDTVG+LAR+ ++ +V + + Q + +
Sbjct: 166 AYTGVIGFKPTYGRVSRWGVIPYAQTLDTVGILARDIGVVKQVFNAIDQHDEKDVTSIPE 225
Query: 248 LIFADDIFQLSKVPKLKTIHVISKA------IESLSGYQNP---EHMN----VGQYIAS- 293
I +D S +PKL + + +E LSGY + +N +G I
Sbjct: 226 EIRSD----WSGLPKLADMKNTTVGVPEEFLVEELSGYSRQVWYDTLNSLRKLGCTIKQV 281
Query: 294 NVPSL-KGLRAQST-SPENGTATLKALSSVMLSLQRYEFK------TIYEEWVKSAKPRL 345
N+P + K L A T + L V RY F T+++ ++
Sbjct: 282 NIPQIEKSLSAYYTIVSAEAASNLSRYDGV-----RYGFNSTDKPGTVHDIISRNRSSSF 336
Query: 346 GYNVFERVLEAINTTQDNI-----------KILYKVRNEMRAALQRLLKDDK-------I 387
G V R++ T K+L K N++ + L DDK +
Sbjct: 337 GQEVQRRIILGNYTLSSESGDHYLKATEVRKMLVKELNQVFSTQHMLFSDDKPSSSGCDV 396
Query: 388 LVIPTVSDPPLKLNTKKTYSAE-FHDRTL--VLSSIGSMSGCCQVAIPIGKYN----EHP 440
L+ PT + P L+ + E F + + +L+ S++G +++P K N + P
Sbjct: 397 LISPTYTSIPCTLDEYHNMNEENFLNNYINDILTVPASLAGVPAISVPYQKQNTPEAKIP 456
Query: 441 ISISFITYHGGDKFLLDTVLDL 462
+I I HG D+FLLD +L
Sbjct: 457 EAIQIIAQHGNDEFLLDFTKEL 478
>gi|386824255|ref|ZP_10111392.1| amidase [Serratia plymuthica PRI-2C]
gi|386378839|gb|EIJ19639.1| amidase [Serratia plymuthica PRI-2C]
Length = 449
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 99/153 (64%), Gaps = 3/153 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ ++KD+FDV G T GS A + A VV LL+ GA IGKT + EFA
Sbjct: 70 LDGVPVSVKDLFDVAGEATAAGS-RVLAAAPVAAKHAAVVERLLQAGAVVIGKTNMTEFA 128
Query: 133 FGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
+ G N HYGTP NP ++ IPGGSSSG+AVAVA + ++G+DT G VR+PA+FC
Sbjct: 129 YSGLGINPHYGTPANPWDRVVRRIPGGSSSGAAVAVAEGMCFGSIGSDTGGSVRIPAAFC 188
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
G+ G++P+ +S G+LP S SLD++G++A +
Sbjct: 189 GLTGFKPTARRISDGGLLPLSPSLDSIGVIAHD 221
>gi|194289556|ref|YP_002005463.1| amidase [Cupriavidus taiwanensis LMG 19424]
gi|193223391|emb|CAQ69396.1| putative AMIDOTRANSFERASE/AMIDASE [Cupriavidus taiwanensis LMG
19424]
Length = 458
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 130/416 (31%), Positives = 187/416 (44%), Gaps = 42/416 (10%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
A PLAGL ++KD++DV G +T S + D A A VV L GA IG+T +
Sbjct: 66 ALHPLAGLPVSVKDLYDVAGEITRAAS-VVRADAAPAAADAPVVARLRAAGAALIGRTNM 124
Query: 129 DEFAFGITGENKHYGTPVNP---QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
EFAF G N HYGTP NP + P IPGGSSSG+AV+VA L ALG+DT G +R+
Sbjct: 125 TEFAFSGVGINPHYGTPANPAGGEGPGRIPGGSSSGAAVSVALGLAVAALGSDTGGSIRI 184
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPR-- 243
PA+ CGI G++P+ V + G P S +LDT +AR S V V+ +AV PR
Sbjct: 185 PAALCGITGFKPTARRVPLAGAFPLSYTLDTACAMARTVSDCIAVDSVIAD-SAVLPRVT 243
Query: 244 --RARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGL 301
A RL + P V+++A + G S G+
Sbjct: 244 DAAATRLAIPRQLLLDDLDP------VVARAFDRALGRL----------------SAAGV 281
Query: 302 RAQSTS-PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTT 360
R + PE G L AL++ E I+ + + + R V R+ +
Sbjct: 282 RLEHVDLPELG--ELAALNA-HGGFSAAEAYAIHRHTLAARRDRYDPRVASRIDRGAGIS 338
Query: 361 QDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVL--- 417
+ L + R + A ++ L +V PTV ++ +T A F +L
Sbjct: 339 AADYIDLGRARLDWIARMEARLDGFDAVVCPTVPMVAPEIAPLRTDDAHFFRVNALLLRN 398
Query: 418 SSIGSMSGCCQVAIPIGKYNEHPISISFITYHGG--DKFLLDTVLDLYDSLQEQVN 471
+S + C V++P +E P+ + + HG D LL T L L +Q V
Sbjct: 399 TSAFNFFDGCSVSMPCHAPDELPVGL--MLSHGPMRDASLLGTALALERIVQPIVQ 452
>gi|418518063|ref|ZP_13084216.1| amidase [Xanthomonas axonopodis pv. malvacearum str. GSPB1386]
gi|410705213|gb|EKQ63691.1| amidase [Xanthomonas axonopodis pv. malvacearum str. GSPB1386]
Length = 486
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 99/163 (60%), Gaps = 3/163 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDH-HEAERTAVVVTLLLKNGATCIGKTVLDEF 131
LAG+ F +KD+FDV G VT G+ R H A R A VV L + GA +G +DEF
Sbjct: 108 LAGVPFVVKDLFDVAGQVTTAGA--AVRAHCPPASRDAAVVQRLGEAGAVLVGTANMDEF 165
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+G N HYGT NP H+ GGSS GSA AVAA LV FALG+DT G +RVPA+ CG
Sbjct: 166 AYGFATVNAHYGTTANPHDDQHLAGGSSGGSAAAVAAGLVPFALGSDTNGSIRVPAALCG 225
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL 234
I G RP+HG + + GV P +LD VG A + + L V VL
Sbjct: 226 IYGLRPTHGALPLDGVFPFVDALDVVGPFATSVADLRCVYDVL 268
>gi|398956909|ref|ZP_10677027.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM33]
gi|398149211|gb|EJM37865.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM33]
Length = 374
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/149 (53%), Positives = 95/149 (63%), Gaps = 1/149 (0%)
Query: 75 GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFG 134
G + AIKD D+ G+ T GS + D A + A VV +L G +GKT L E AFG
Sbjct: 14 GKRVAIKDSIDIAGHPTRSGSRAFA-DAPAATKNAEVVDAILDAGWQIVGKTNLHELAFG 72
Query: 135 ITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILG 194
+TG N GTPVNPQ P +PGGSSSGSA AVAA L D A+GTDT G VRVPA+ CGI G
Sbjct: 73 VTGINDWTGTPVNPQAPDRVPGGSSSGSASAVAAGLADIAIGTDTGGSVRVPAACCGIAG 132
Query: 195 YRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
+P++G VS IG P SLD VG AR+
Sbjct: 133 LKPTYGRVSRIGAHPLESSLDCVGPFARS 161
>gi|171315681|ref|ZP_02904915.1| Amidase [Burkholderia ambifaria MEX-5]
gi|171099213|gb|EDT43986.1| Amidase [Burkholderia ambifaria MEX-5]
Length = 446
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 96/175 (54%), Gaps = 4/175 (2%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG +K FD +G+VT GS D A A +V++L + GA + +T + EF
Sbjct: 65 PLAGAVLTVKACFDCEGWVTHAGSRVLA-DEPPARTDAAMVSMLRRAGAVLVAQTAMTEF 123
Query: 132 AFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A+G G N+ YGTP P + GGSSSG+AV+VA D ++G+DT G R+PA+F
Sbjct: 124 AYGALGVNRAYGTPTTPLDARRERVAGGSSSGAAVSVALGAADLSVGSDTSGSARIPAAF 183
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRR 244
CG+ G++PS G + G+ S S D GLLA L R V L + RR
Sbjct: 184 CGVTGFKPSRGRYASDGMQFLSTSFDVPGLLAATVE-LCRQADVALHGRGAQRRR 237
>gi|386014791|ref|YP_005933068.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Pantoea ananatis
AJ13355]
gi|327392850|dbj|BAK10272.1| glutamyl-tRNA(Gln) amidotransferase subunit A GatA [Pantoea
ananatis AJ13355]
Length = 465
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/222 (39%), Positives = 122/222 (54%), Gaps = 24/222 (10%)
Query: 38 RRNPKLNGRVDFGA--FLE----------RFELIPFPQPPPPAARQPLAGLKFAIKDVFD 85
++NP+LN D + L+ R E++P PLAG+ +A+K++FD
Sbjct: 35 KQNPQLNAWTDITSTRMLQEADAIDKQRLRGEMLP-----------PLAGIPYAVKNLFD 83
Query: 86 VKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTP 145
V+GY T G+ + R A R A +T L + GA G +D +A+G T EN HYG
Sbjct: 84 VQGYSTLAGA-ELFRQRPAANRDAFAITQLQQAGALLSGMVNMDAYAYGFTTENSHYGAT 142
Query: 146 VNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMI 205
NP + I GGSS GSA AVAA LV F+LGTDT G +RVPAS CGI G +P+ G +S
Sbjct: 143 RNPHDLARIAGGSSGGSAAAVAAGLVPFSLGTDTNGSIRVPASLCGIFGLKPTFGRLSRS 202
Query: 206 GVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
G P SLD +G AR L +V +L ++++ +A R
Sbjct: 203 GSHPFVASLDHIGPFARRVDDLAQVYDLLQGKDSMDAFQADR 244
>gi|354543357|emb|CCE40076.1| hypothetical protein CPAR2_101140 [Candida parapsilosis]
Length = 449
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 106/167 (63%), Gaps = 2/167 (1%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
A PL +A+KD + ++T S ++++ A VV LL +NGATCIGK
Sbjct: 29 AHNGPLLNTTYALKDNIVTQDFLTTAASHALY--NYQSPFDATVVKLLFENGATCIGKAN 86
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
LDEF G + N +YG +NP +PGGSS GSA AV+ ++ F++GTDT G +R+PA
Sbjct: 87 LDEFGMGSSNLNSYYGAVINPFNEQAVPGGSSGGSAAAVSGKIASFSIGTDTGGSIRLPA 146
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL 234
S+C + G++P++G +S GV+P +Q+LDTVG+++ N ++ RV VL
Sbjct: 147 SYCNVFGFKPTYGRISRWGVIPYAQTLDTVGIISDNVDLVERVYDVL 193
>gi|145590879|ref|YP_001152881.1| amidase [Pyrobaculum arsenaticum DSM 13514]
gi|145282647|gb|ABP50229.1| Amidase [Pyrobaculum arsenaticum DSM 13514]
Length = 401
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 165/363 (45%), Gaps = 39/363 (10%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L GL A+KD +V G G+P +R A+RTA VV L+ GA IGKT + E A
Sbjct: 44 LCGLVVAVKDNIEVAGMPITNGAPYMRR---MADRTAPVVRRLIAEGAVVIGKTNMHELA 100
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G T N HYG NP PS I GGSS GSA AVA + D +GTDT G VR+PA+ CG+
Sbjct: 101 LGATNINPHYGPTRNPHDPSRITGGSSGGSAGAVAVGVADLGVGTDTGGSVRIPAALCGV 160
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL--LQLNAVEPRRARRLIF 250
+GY+P +G + GVLP +QSLD VG + R + + H+L E + +R F
Sbjct: 161 VGYKPPYGKIPTEGVLPLAQSLDHVGFITRT---VEELVHILSAAGWGPAELPQMKRFRF 217
Query: 251 ADDIFQLSKVPKL-KTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
A I + K +ES+ G ++ ++ G+Y A
Sbjct: 218 AVLIGVAENTKHVDKAFWKAVSVLESIGGIRDEVFIDGGRYGA----------------- 260
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
A ++++LS E Y +++SA +G +V + +
Sbjct: 261 -------ARAAILLS----EAAANYYHYLRSAAEHMGRDVAALLSAGAALPAVAYVTAKR 309
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
V+ E + L K ++ PT + L + + R L + + +++G +
Sbjct: 310 VKEEATRFFESLFKKYDVVATPTTATEALAIEEAGKLA--VRGRLLAYTELFNLTGHPAL 367
Query: 430 AIP 432
++P
Sbjct: 368 SVP 370
>gi|389793513|ref|ZP_10196676.1| Amidase [Rhodanobacter fulvus Jip2]
gi|388433727|gb|EIL90687.1| Amidase [Rhodanobacter fulvus Jip2]
Length = 465
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 121/389 (31%), Positives = 186/389 (47%), Gaps = 25/389 (6%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A+KD FDV G+ T G PD RD + A V L GA IGKT +DE A
Sbjct: 79 LDGIPLAVKDNFDVAGWPTRAGLPD--RDT-PVQDDAHVTARLRAAGALLIGKTNMDEGA 135
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G +N H+G NP + GGSS G+A AVAA L A+ +D++G VR+PAS+CG+
Sbjct: 136 LGAATDNPHFGATHNPHRHGYTAGGSSGGAAAAVAAGLAVAAVASDSLGSVRIPASYCGV 195
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G +P+HG +S G++ ++ LD VGLLAR+A L VLLQ+ A R
Sbjct: 196 YGLKPTHGEISARGMVTAARRLDAVGLLARSADDL----TVLLQVLAGYDADDARSRRRR 251
Query: 253 DIFQLSKVPKLKTIHVISKAIESLSGYQ-NPEHMNVGQYIASNVP-SLKGLRAQSTSPEN 310
F L P + H+ + +L+ PE + V + + +P +L R + N
Sbjct: 252 VAFAL---PDWEPGHLRVGLLPNLAAVGVEPEVIEVFETAMAKLPHALSDRRTVDFADWN 308
Query: 311 GTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLE-AINTTQDNIKILYK 369
+ T +A +L ++ T + ++ KP F +L+ A + + I +
Sbjct: 309 FSRTRRA---GLLLMEAEMLGTFASDLARADKPVSAR--FRGMLDFAAKKSAADYAIADR 363
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQV 429
V + ++RL +LV+PT L+ D L+S S++GC V
Sbjct: 364 VLDAATLKMRRLFAQVDVLVLPTTPQGAFPLDGPAP------DSQADLTSFASLAGCPAV 417
Query: 430 AIPIGKY-NEHPISISFITYHGGDKFLLD 457
++P+G N P+ + + G D LL+
Sbjct: 418 SLPMGHLPNGLPVGLQLVGARGSDLRLLE 446
>gi|384086375|ref|ZP_09997550.1| amidohydrolase, AtzE family protein [Acidithiobacillus thiooxidans
ATCC 19377]
Length = 465
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 105/175 (60%), Gaps = 1/175 (0%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAG+ FA+K++FDV+G VT GS +RD A A +V + GA +G + E+A
Sbjct: 74 LAGVPFAVKNLFDVEGEVTLAGSRINRRDD-PASMDATLVQRMNSAGAVLLGALNMGEYA 132
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+ TGEN HYG NP S + GGSS GS AVA +V ALG+DT G +RVP+S CGI
Sbjct: 133 YDFTGENIHYGPSRNPHDGSRMTGGSSGGSGAAVAGGMVPIALGSDTNGSIRVPSSLCGI 192
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
G++P++G +S G P SLD VG +AR+ + L RV VL + +P +R
Sbjct: 193 FGFKPTYGRLSRAGTFPFCPSLDHVGPMARSVTDLARVYEVLQGYDHKDPASVQR 247
>gi|39934538|ref|NP_946814.1| allophanate hydrolase [Rhodopseudomonas palustris CGA009]
gi|39648387|emb|CAE26908.1| putative glutamyl-tRNA(Gln) amidotransferase subunit A
[Rhodopseudomonas palustris CGA009]
Length = 601
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 99/191 (51%), Gaps = 8/191 (4%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ A+KD DV G T P + ++ R A V L GA IGKT LD+F
Sbjct: 65 PLYGVPVAVKDNIDVAGLPTTAACPAFA---YQPARDATAVAKLRAAGAIVIGKTNLDQF 121
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G+ G YG P N +PGGSSSGSAVAV A LV +LGTDT G RVPA
Sbjct: 122 ATGLVGVRSPYGVPRNAMRSDLVPGGSSSGSAVAVGAGLVPLSLGTDTAGSGRVPAMLNN 181
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
I+G +PS G +S GV+P ++LD V + A V+ +A +P R + A
Sbjct: 182 IVGLKPSLGMISTTGVVPACRTLDCVSIFALTTDDAMTALRVMTGPDAEDPFSRERPVAA 241
Query: 252 DDIFQLSKVPK 262
++ +PK
Sbjct: 242 -----VTAIPK 247
>gi|297623399|ref|YP_003704833.1| amidase [Truepera radiovictrix DSM 17093]
gi|297164579|gb|ADI14290.1| Amidase [Truepera radiovictrix DSM 17093]
Length = 437
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 115/374 (30%), Positives = 170/374 (45%), Gaps = 38/374 (10%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGS------PDWKRDHHEAERTAVVVTLLLKNGATCIGK 125
PL G+ A+KD+ D +G VT G+ P +D AER A + L GK
Sbjct: 66 PLQGVPLALKDLMDTRGEVTAAGAKVLLERPPAAQDCPAAERLAAAGAVFL-------GK 118
Query: 126 TVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
T + E AF G N H+GTP N + PS IPGGSSSGSAVAVA+ L A+G+DT G VR+
Sbjct: 119 TTMTELAFSGLGLNPHFGTPPNARDPSRIPGGSSSGSAVAVASGLACAAIGSDTGGSVRI 178
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRA 245
PA+F ++G + + G V M G +P S +LDT+G + + + H+L L P
Sbjct: 179 PAAFNNLVGLKTTDGAVPMAGCVPLSTTLDTLGPITKT---VEDAWHLLRALTGRPP--- 232
Query: 246 RRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQS 305
F V LK + + E L V A L+ A+
Sbjct: 233 -------APFAPRSVRGLKLLAPTTVLQEDL-------DEAVRGAFAGACERLQAAGARV 278
Query: 306 TSPENGT-ATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINT-TQDN 363
T E A L L S E +YE+ ++ V R+L + D
Sbjct: 279 TVLELPVLAELNGLYGRFGSYAAMEALALYEDLLRERAGDFDPRVAARILASRGRLATDY 338
Query: 364 IKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEF--HDRTLVLSSIG 421
I++ Y+ R+ ++ A R + ++ PTV+ P KL A F + R L +++
Sbjct: 339 IRLGYE-RSRLQRAFWRACEGFDAVLAPTVAALPPKLADLAEDDAYFAANARVLRNTTLF 397
Query: 422 SMSGCCQVAIPIGK 435
++ G V++P G+
Sbjct: 398 NLLGVPAVSVPCGE 411
>gi|381173060|ref|ZP_09882170.1| amidohydrolase, AtzE family protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|380686492|emb|CCG38657.1| amidohydrolase, AtzE family protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 486
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 98/162 (60%), Gaps = 1/162 (0%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAG+ F +KD+FDV G VT G+ + A R A VV L + GA +G +DEFA
Sbjct: 108 LAGVPFVVKDLFDVAGQVTTAGA-AVRAYCPPASRDAAVVQRLGEAGAVLVGTANMDEFA 166
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+G N HYGT NP H+ GGSS GSA AVAA LV FALG+DT G +RVPA+ CGI
Sbjct: 167 YGFATVNAHYGTTANPHDDQHLAGGSSGGSAAAVAAGLVPFALGSDTNGSIRVPAALCGI 226
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL 234
G RP+HG V + GV P +LD VG A + + L V VL
Sbjct: 227 YGLRPTHGAVPLDGVFPFVDALDVVGPFATSVADLRCVYDVL 268
>gi|398803836|ref|ZP_10562850.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Polaromonas sp. CF318]
gi|398095700|gb|EJL86035.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Polaromonas sp. CF318]
Length = 450
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 126/417 (30%), Positives = 188/417 (45%), Gaps = 49/417 (11%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAG+ ++KD+FDV G VT GS + A+ V L GA +G+T + EFA
Sbjct: 68 LAGIPVSVKDLFDVAGQVTAAGSKVLAQ-AAPAQADCPAVARLRAAGAALVGRTNMVEFA 126
Query: 133 FGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
F G N HYGTP NP P+ IPGGSSSG+AV+VA LG+DT G +R+PA+ C
Sbjct: 127 FSGVGINPHYGTPANPADPATARIPGGSSSGAAVSVATGAALVGLGSDTGGSIRIPAALC 186
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVE----PRRAR 246
GI+G++ + V G LP S SLDTV L R+ V H +L VE P
Sbjct: 187 GIVGFKSTARLVPTAGALPLSTSLDTVSALTRSVRDAVTV-HEVLAARRVELTGKPLSGY 245
Query: 247 RLIFADDIFQ--LSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQ 304
RL A + Q LS+ +++A E + V + + + +
Sbjct: 246 RLAVAGTLMQDALSR--------TVAQAFE--------RSLQVLREAGAKIVEIPLGEIT 289
Query: 305 STSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYN--VFERVLEAINTTQD 362
+ N T L A S + K I E + GY+ V R+L +
Sbjct: 290 ELTAINATGGLSAAESYA-----WHRKLIAER-------QAGYDPRVALRILRGAGMSAA 337
Query: 363 NIKILYKVRNEMRAALQ-RLLKDDKIL--VIPTVSDPPLKLNTKKTYSAEFHDRTLVLSS 419
+ L R + A ++ RL D +L +P V+ P L T + L +S
Sbjct: 338 DYIDLLAARKDWIARMEARLDGFDAVLSPTVPLVAPPIAGLLNDDTEFFRVNGLLLRNTS 397
Query: 420 IGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNL 476
+ +M C +++P + P+ + + +H DT+LDL +LQ + +A +L
Sbjct: 398 VVNMLDGCAISLPCHAPGQLPVGL--MLWHA--ALHDDTMLDL--ALQVEAALAQSL 448
>gi|302403847|ref|XP_002999762.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Verticillium
albo-atrum VaMs.102]
gi|261361518|gb|EEY23946.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Verticillium
albo-atrum VaMs.102]
Length = 720
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 107/192 (55%), Gaps = 12/192 (6%)
Query: 51 AFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAV 110
A E+++ P P PL G+ F +KD DV+G T P + + + TA
Sbjct: 307 ALAEKYKEKPLP---------PLFGVPFGVKDSIDVEGIETTAACPSYA---YVPKATAT 354
Query: 111 VVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQL 170
V +L G +GKT LD+ A G++G YG P + I GGSSSG VAVAA+L
Sbjct: 355 CVQHILDAGGIYVGKTNLDQLATGLSGCRSPYGVPHSIFSKDLIAGGSSSGGCVAVAARL 414
Query: 171 VDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRV 230
V F + TDT G RVPA+F G++G++P+ GT+S G++P ++LD++ ++A + + V
Sbjct: 415 VPFTVATDTAGSGRVPAAFNGVVGFKPTKGTISARGLIPACKTLDSIAIVATSVADARAV 474
Query: 231 GHVLLQLNAVEP 242
V+ + + +P
Sbjct: 475 WRVIAKHDKADP 486
>gi|358012575|ref|ZP_09144385.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acinetobacter
sp. P8-3-8]
Length = 492
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 87/152 (57%), Gaps = 2/152 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A KD+F +G T GS D+ + A VV + G +GK +DEFA
Sbjct: 71 LTGVPIAHKDIFCTQGIRTSAGSK--MLDNFISPYDATVVAKTKEAGLVTLGKVNMDEFA 128
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G T E+ YG NP H+PGGSS GSA VAA L A GTDT G +R PASFCG+
Sbjct: 129 MGSTSESSFYGATKNPWNLEHVPGGSSGGSAAVVAADLAPIATGTDTGGSIRQPASFCGL 188
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
G +P++G VS G++ + SLD G +AR+A
Sbjct: 189 TGLKPTYGRVSRFGMIAFASSLDQGGPMARSA 220
>gi|220923651|ref|YP_002498953.1| amidase [Methylobacterium nodulans ORS 2060]
gi|219948258|gb|ACL58650.1| Amidase [Methylobacterium nodulans ORS 2060]
Length = 427
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 177/394 (44%), Gaps = 35/394 (8%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ +IKD+FDV G T GS +R A + A VV L + GA IGKT + EF
Sbjct: 51 PLDGVIVSIKDLFDVAGEPTTAGSA-IRRKAVPAAQDAPVVARLRRAGAVIIGKTNMSEF 109
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
AF G N H+GTP N P+ IPGGSSSG+ V+VA D A+GTDT G +R+PA+ G
Sbjct: 110 AFSGLGLNPHWGTPGNAADPTRIPGGSSSGAGVSVALGTSDIAIGTDTGGSIRIPAALNG 169
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLL--QLNAVEPRRARRLI 249
++G++P+ V + G P S SLD++G LAR+ VL + + P R L
Sbjct: 170 VVGFKPTARRVPLAGAFPLSPSLDSIGPLARSVQACADADTVLSGEEFGPLRPVALRDLR 229
Query: 250 FADDIFQLSKVPK----LKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQS 305
VP+ +T ++++A E+ G E + + ++
Sbjct: 230 VG--------VPRGLLFTETDPMVAQAFEAALGRLGTESVRISDIALDDL---------- 271
Query: 306 TSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIK 365
A ++ + E I+ +W+ + + V R+ T
Sbjct: 272 -------LARMAEATAAAPVASVEAAEIHADWIDAEEAAFDPRVHARISRGRTVTAGTYI 324
Query: 366 ILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVL--SSIGSM 423
+ + R E+ A L +L +P + P + + A L+L + +G++
Sbjct: 325 RMMRARAELIRACDDRLAGIDLLALPATAIPAVPIAAMAEDEAFTRTNLLMLRNTMVGNL 384
Query: 424 SGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
V++P+ P+ + + HG D+ LL+
Sbjct: 385 FDLTGVSLPL-PGQALPVGLMLLARHGQDRRLLE 417
>gi|393765714|ref|ZP_10354275.1| amidase [Methylobacterium sp. GXF4]
gi|392728950|gb|EIZ86254.1| amidase [Methylobacterium sp. GXF4]
Length = 463
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 95/154 (61%), Gaps = 4/154 (2%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ +KD+ D++G +T GS AERTA + L+ G +GKT EF
Sbjct: 73 PLHGVPVVLKDLIDLEGRITMGGSA--AHRARRAERTATIARRLIAQGMIVLGKTHTVEF 130
Query: 132 AFGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
A+G G N+H GTP NP P PGGSSSG+ VAVAA++ + +GTDT G VR+PASF
Sbjct: 131 AYGGWGTNQHLGTPWNPWDPETQRTPGGSSSGTGVAVAARMAPWGIGTDTGGSVRLPASF 190
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
CG+ G + + G VS G++P S +LDT G LAR
Sbjct: 191 CGLTGLKVTVGRVSTWGIVPLSTTLDTPGPLART 224
>gi|384135008|ref|YP_005517722.1| amidase [Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
gi|339289093|gb|AEJ43203.1| Amidase [Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
Length = 454
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 191/418 (45%), Gaps = 39/418 (9%)
Query: 67 PAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKT 126
P PLAG+ ++KD+ D T +G ++ H ERTAV V L + A IGK
Sbjct: 67 PEGLGPLAGIPISVKDLIDTSFLPTTYGHGRFR--EHVPERTAVCVARLQRAHALIIGKA 124
Query: 127 VLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
L EFAFG+T EN H+G NP+ S I GGSS GSA +VA L ++GTDT G VR+P
Sbjct: 125 HLHEFAFGVTNENPHFGPARNPRDLSRITGGSSGGSAASVAGGLAQASVGTDTGGSVRIP 184
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRAR 246
A+ G +G++PS+G + GVLP + +LD VG LA + V V+ L
Sbjct: 185 AALTGCVGFKPSYGLIPTDGVLPLAPTLDHVGALANSVEDAAIVTAVMAGL--------- 235
Query: 247 RLIFADDIFQLSKVPKLKTIH--VISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQ 304
D LS P + V+ ++ + +PE V + + L+++
Sbjct: 236 -----DPDSWLSPAPPAGRLRAAVVPGLVKR---FASPE---VSAWFEGLI---HLLQSR 281
Query: 305 STSPENGTATLKA--LSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQD 362
T G+ L A ++ ++ E + W+ K G +V ER+ E
Sbjct: 282 GTIDIAGSIELDADEIARHQANILGAEAYATHRAWLVDHKDAYGEDVRERLEEGARVDTA 341
Query: 363 NIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKL--NTKKTYSAEFHDRTLV--LS 418
+ + R R ++ + +++P P ++ N+ + E R L+ +
Sbjct: 342 SYAESLRFRARFRHFIRDMFAQYDCILLPVTPIPATRMGENSVWIHGEERAVRPLLTRFT 401
Query: 419 SIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNL 476
+ ++SG ++IP G+ + P+ + + GGD LL + + +IAS+L
Sbjct: 402 NPWNLSGAPAISIPAGQVSGLPMGLQIVGKPGGDARLLRIARRI------EADIASHL 453
>gi|375008395|ref|YP_004982028.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|359287244|gb|AEV18928.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Geobacillus
thermoleovorans CCB_US3_UF5]
Length = 470
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 185/417 (44%), Gaps = 41/417 (9%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R PL G+ AIKD+ V +T GS R+ A +A V+ L + GA GKT L
Sbjct: 70 RGPLHGIPIAIKDLLYVADEMTTMGS-KIHRNFRPA-YSATVIERLTEAGAVFPGKTNLH 127
Query: 130 EFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
E+A+G T N H+G NP P IPGGSS GS VA AA + +LGTDT G +R+P+SF
Sbjct: 128 EYAWGATNNNPHFGPARNPWDPERIPGGSSGGSGVATAAHMTIASLGTDTGGSIRIPSSF 187
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
CGI+G +P+HG VS G P + SLD +G + + + +VL + +P+
Sbjct: 188 CGIVGLKPTHGLVSKYGCFPLAWSLDHIGPMTKT---VRDAAYVLEAIAGYDPKDPTSFA 244
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPS--LKGLRAQSTS 307
+ L+ ES+ G + + + Y +V K ++ S
Sbjct: 245 APTTSYALT-------------FKESVKGVK----IGIEPYFFDHVDKEVEKAVKQAIAS 287
Query: 308 PENGTATLKALSSVMLSLQRY--------EFKTIYEEWVKSAKPRLGYNVFERVLEAINT 359
E A ++ + L +Y E TI+ + + G +V R L +
Sbjct: 288 LEREGAVVETVRIPTLQYAQYAEMITILSEASTIHHNHLVEREEDFGDDV--RFLLKLGE 345
Query: 360 TQDNIKIL--YKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTY----SAEFHDR 413
+ L ++R ++ + +L+ PT+ P K+ + F D
Sbjct: 346 LPSAVDYLEAQQIRLKLDHEFMEIFNKVDVLITPTIPFLPPKIGQDTVWINGEEVNFLDH 405
Query: 414 TLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQV 470
+ + +++G V +P G P+ + I G+ +L+ V D++++L ++
Sbjct: 406 IIRFTGPFNLTGLPVVTVPCGFVQGLPVGMQIIGPAFGEGTILN-VADVFETLHPEL 461
>gi|119873082|ref|YP_931089.1| amidase [Pyrobaculum islandicum DSM 4184]
gi|119674490|gb|ABL88746.1| Amidase [Pyrobaculum islandicum DSM 4184]
Length = 401
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 106/178 (59%), Gaps = 9/178 (5%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A+KD +V G G+P K+ +++TA VV L+ GA +GKT + E A
Sbjct: 43 LCGMTLAVKDNIEVMGMPITNGAPYMKKI---SDKTAAVVRRLMAEGAVVLGKTNMHELA 99
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G+T N H+G NP PS I GGSS GSA AVA + D +GTDT G VR+PA+ CG+
Sbjct: 100 LGVTNINPHFGPTRNPHDPSRITGGSSGGSAGAVAIGVADLGIGTDTGGSVRIPAALCGV 159
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARN----ASILHRVGHVLLQLNAVEPRRAR 246
+GY+P +G + M G+ P SQSLD VG +AR+ +IL VG L+ P+R R
Sbjct: 160 VGYKPPYGKIPMDGIYPLSQSLDHVGFIARSVKELVNILSAVGWAPRDLSP--PKRFR 215
>gi|284997770|ref|YP_003419537.1| amidase [Sulfolobus islandicus L.D.8.5]
gi|284445665|gb|ADB87167.1| Amidase [Sulfolobus islandicus L.D.8.5]
Length = 397
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 185/389 (47%), Gaps = 42/389 (10%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L + F IKDV KG T GS +++ ++ A VV +L+ G IGKT EFA
Sbjct: 27 LKDVTFGIKDVILTKGIRTTAGSRIL--ENYVPQKNAYVVDAILREGGKIIGKTNTHEFA 84
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G T + G NP P I GGSS GSAVAV ++D +GTDT G VR+P+S CG+
Sbjct: 85 LGATNTSSIGGPARNPVNPERISGGSSGGSAVAVKLDMIDVGIGTDTGGSVRIPSSLCGV 144
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLAR-NASILHRVGHVLL--QLNAVEPRRAR--- 246
+G++P+ G + GV+P S SLDTVG++ + N +L RV +L + VE + R
Sbjct: 145 IGFKPTTGLIPTDGVIPFSWSLDTVGIIVKDNIGLLRRVFDAILPNEKKKVEIAKLRTRP 204
Query: 247 RL-IFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQS 305
RL +F D ++S++ LK I+ LS Y + + ++P L+
Sbjct: 205 RLGLFLFDEMEVSRI-LLKEIYA------KLSSYFD--------IVEVDLPLLR------ 243
Query: 306 TSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIK 365
+ G+ T + +S E + +++W+ + + + +L+ + + +
Sbjct: 244 ---QYGSKTRRTISLA-------EASSYHKDWITENSNKYFKDTYTLLLDGMKISATDYI 293
Query: 366 ILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSG 425
+ R + +L K+ ++ PT K++ + +F + + + + ++ G
Sbjct: 294 DAIRYRRVLIEEYIKLFKNIDFILSPTTKIVAPKISDVLSNPLQFREYLIANTELFNVVG 353
Query: 426 CCQVAIPIGKYNEHPIS--ISFITYHGGD 452
++IP NE P+ IS Y GD
Sbjct: 354 APSISIPFSTLNELPVGLMISGELYKDGD 382
>gi|190346777|gb|EDK38944.2| hypothetical protein PGUG_03042 [Meyerozyma guilliermondii ATCC
6260]
Length = 470
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 107/171 (62%), Gaps = 3/171 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAGLK A+KD F T GS + + + A V+L+ +GA +GKT +DEF
Sbjct: 44 LAGLKAAVKDNFVTTKEPTTSGSEMLRT--YVSPFDATTVSLIEASGAKVVGKTNMDEFG 101
Query: 133 FGITGENKHYGTPVNPQMP-SHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
G + N +G+ VNP P +HI GGSS GSA AVA + DFALGTDT G VR+PAS+CG
Sbjct: 102 MGSSNTNSAFGSVVNPMFPENHISGGSSGGSAAAVALREADFALGTDTGGSVRLPASYCG 161
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
+ G++P++G +S GV+ +QSLDTVG+ AR+ + V VL ++ +P
Sbjct: 162 VYGFKPTYGRISRWGVIAYAQSLDTVGIFARDLDTVRSVFDVLDVADSKDP 212
>gi|291616409|ref|YP_003519151.1| GatA [Pantoea ananatis LMG 20103]
gi|291151439|gb|ADD76023.1| GatA [Pantoea ananatis LMG 20103]
Length = 465
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/176 (44%), Positives = 106/176 (60%), Gaps = 1/176 (0%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ +A+K++FDV+GY T G+ + R A R A +T L + GA G +D +
Sbjct: 70 PLAGIPYAVKNLFDVQGYSTLAGA-ELFRQRPAANRDAFAITQLQQAGALLSGMVNMDAY 128
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+G T EN HYG NP + I GGSS GSA AVAA LV F+LGTDT G +RVPAS CG
Sbjct: 129 AYGFTTENSHYGATRNPHDLARIAGGSSGGSAAAVAAGLVPFSLGTDTNGSIRVPASLCG 188
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
I G +P+ G +S G P SLD +G AR L +V +L ++++ +A R
Sbjct: 189 IFGLKPTFGRLSRSGSHPFVASLDHIGPFARRVDDLAQVYDLLQGKDSMDAFQADR 244
>gi|227830345|ref|YP_002832125.1| amidase [Sulfolobus islandicus L.S.2.15]
gi|227456793|gb|ACP35480.1| Amidase [Sulfolobus islandicus L.S.2.15]
Length = 397
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 185/389 (47%), Gaps = 42/389 (10%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L + F IKDV KG T GS +++ ++ A VV +L+ G IGKT EFA
Sbjct: 27 LKDVTFGIKDVILTKGIRTTAGSRIL--ENYVPQKNAYVVDAILREGGKIIGKTNTHEFA 84
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G T + G NP P I GGSS GSAVAV ++D +GTDT G VR+P+S CG+
Sbjct: 85 LGATNTSSIGGPARNPVDPERISGGSSGGSAVAVKLDMIDVGIGTDTGGSVRIPSSLCGV 144
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLAR-NASILHRVGHVLL--QLNAVEPRRAR--- 246
+G++P+ G + GV+P S SLDTVG++ + N +L RV +L + VE + R
Sbjct: 145 IGFKPTTGLIPTDGVIPFSWSLDTVGIIVKDNIGLLRRVFDAILPNEKKKVEIAKLRTRP 204
Query: 247 RL-IFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQS 305
RL +F D ++S++ LK I+ LS Y + + ++P L+
Sbjct: 205 RLGLFLFDEMEVSRI-LLKEIYA------KLSSYFD--------IVEVDLPLLR------ 243
Query: 306 TSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIK 365
+ G+ T + +S E + +++W+ + + + +L+ + + +
Sbjct: 244 ---QYGSKTRRTISLA-------EASSYHKDWITENSNKYFKDTYTLLLDGMKISATDYI 293
Query: 366 ILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSG 425
+ R + +L K+ ++ PT K++ + +F + + + + ++ G
Sbjct: 294 DAIRYRRVLIEEYIKLFKNIDFILSPTTKIVAPKISDVLSNPLQFREYLIANTELFNVVG 353
Query: 426 CCQVAIPIGKYNEHPIS--ISFITYHGGD 452
++IP NE P+ IS Y GD
Sbjct: 354 APSISIPFSTLNELPVGLMISGELYKDGD 382
>gi|146418695|ref|XP_001485313.1| hypothetical protein PGUG_03042 [Meyerozyma guilliermondii ATCC
6260]
Length = 470
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 107/171 (62%), Gaps = 3/171 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAGLK A+KD F T GS + + + A V+L+ +GA +GKT +DEF
Sbjct: 44 LAGLKAAVKDNFVTTKEPTTSGSEMLRT--YVSPFDATTVSLIEASGAKVVGKTNMDEFG 101
Query: 133 FGITGENKHYGTPVNPQMP-SHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
G + N +G+ VNP P +HI GGSS GSA AVA + DFALGTDT G VR+PAS+CG
Sbjct: 102 MGSSNTNSAFGSVVNPMFPENHISGGSSGGSAAAVALREADFALGTDTGGSVRLPASYCG 161
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
+ G++P++G +S GV+ +QSLDTVG+ AR+ + V VL ++ +P
Sbjct: 162 VYGFKPTYGRISRWGVIAYAQSLDTVGIFARDLDTVRSVFDVLDVADSKDP 212
>gi|429215234|ref|ZP_19206396.1| asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase
[Pseudomonas sp. M1]
gi|428154461|gb|EKX01012.1| asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase
[Pseudomonas sp. M1]
Length = 448
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 130/378 (34%), Positives = 176/378 (46%), Gaps = 46/378 (12%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ AIKD+FDV+G T GS +R+ A+ A VV L NG +GKT L E A
Sbjct: 64 LDGIPLAIKDIFDVRGSRTLAGSLT-RREVPPAQADAAVVAALRANGMIALGKTNLSELA 122
Query: 133 FGITGENKHYGTPVNPQMPS---HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
F G N H+GTP P P PGGSS+GSAVAV +V ALG+DT G VRVPA+F
Sbjct: 123 FSGLGLNPHFGTP-TPDFPGVEPRAPGGSSAGSAVAVQRGIVSAALGSDTGGSVRVPAAF 181
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
G+ G++ S M+GV P ++SLD++G +AR VG +L A+ RA
Sbjct: 182 NGLAGFKSSPERYPMVGVHPLARSLDSLGPIART------VGDCVLLDAAMRGLRAP--- 232
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
+ P + VI I G + N + ++ L+AQ E
Sbjct: 233 ------LIEAAPLAGSRLVIEAGILDDGGIEPAVRCNF-------LTLMRHLQAQGARLE 279
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEW--VKS--AKPRLGYNVFERVLEAINTTQDNIK 365
L A++ V + R + E W +K + P+ G + RV + + D
Sbjct: 280 --WRRLAAVAEVRQLIPRDGWLGAIEGWDFLKDLVSGPQGGV-IDHRVSSRLRSAAD--- 333
Query: 366 ILYKVRNEMRAALQRLLK------DDKILVIPTVSD--PPLK-LNTKKTYSAEFHDRTLV 416
I + +RAA QRLL+ D L +PTV PPL L A + TL
Sbjct: 334 IPAQRVAAIRAARQRLLQAIAAELDGAFLAMPTVRHVAPPLAPLERDDALFATTNMATLS 393
Query: 417 LSSIGSMSGCCQVAIPIG 434
L+ IGS VAIP G
Sbjct: 394 LTMIGSFLNMPGVAIPSG 411
>gi|398869323|ref|ZP_10624698.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM78]
gi|398230656|gb|EJN16670.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM78]
Length = 452
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 118/390 (30%), Positives = 179/390 (45%), Gaps = 32/390 (8%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ A+KD D YVT +GS + + R A+ V L + GA +GKT+ EF
Sbjct: 79 PLHGIPLAVKDNIDTFDYVTTYGSAHFA--GFKPNRDALCVQRLREAGAVIVGKTLTHEF 136
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+G TG+ G NP I GGSS+GSA AVA+ +V ALGTDT G +R+PA+ CG
Sbjct: 137 AYGPTGDRSLQGAARNPWDARCITGGSSAGSAAAVASGMVPLALGTDTGGSIRIPAALCG 196
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
+G++PS +V + GV P + SLD VG +A N VE R + A
Sbjct: 197 TIGFKPSFASVPLQGVFPLASSLDHVGPIA----------------NHVEDARLLFEVVA 240
Query: 252 DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENG 311
P+ + I+ SG P + + + L G Q T+
Sbjct: 241 GRACAPDAEPRPLRVGWIT------SGSFGPVDAELDRQVYQAAQQLFGEALQETAELAP 294
Query: 312 TATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKV- 370
A+ + +L LQR E ++ E ++ A V ER LE + I +
Sbjct: 295 LAS--GMKDTLLVLQRAEAFEVHAERMQEAPHAFEQEVRER-LELSREVRGWQYIRAQAG 351
Query: 371 RNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAE--FHDRTLVLS--SIGSMSGC 426
+ +AA+ RL + +LV P+V ++ ++ E R VLS S +++G
Sbjct: 352 QASFKAAMARLFERYDLLVSPSVPITATAVDAREVRVGEQDIDVRAAVLSYTSAWNLTGL 411
Query: 427 CQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+++P+G+ P+ + I G D LL
Sbjct: 412 PAISLPVGQVRGMPVGLQVIGAAGEDDRLL 441
>gi|340778538|ref|ZP_08698481.1| amidase [Acetobacter aceti NBRC 14818]
Length = 429
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/181 (45%), Positives = 107/181 (59%), Gaps = 6/181 (3%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAG+ F +KD+FD++G VT GS + A + A VV L+ GA + +DEFA
Sbjct: 68 LAGVPFGVKDLFDMEGLVTTAGSVVLN-GNPPATQDAAVVQRLVAAGAIPVATLNMDEFA 126
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+G + EN HYGT NP+ + GGSS GSA +VAA L+ FALG+DT G +RVPAS CG+
Sbjct: 127 YGFSTENAHYGTTRNPRNTDCLAGGSSGGSAASVAAGLLPFALGSDTNGSIRVPASLCGV 186
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRV-----GHVLLQLNAVEPRRARR 247
G RP+ G + + GV P SLDTVG A + L RV GH L ++ V R R
Sbjct: 187 WGLRPTQGLLPLDGVYPFVASLDTVGPFAGTVTDLQRVFEAMNGHALEEIEDVRSLRIAR 246
Query: 248 L 248
L
Sbjct: 247 L 247
>gi|395498489|ref|ZP_10430068.1| amidase [Pseudomonas sp. PAMC 25886]
Length = 375
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/150 (53%), Positives = 95/150 (63%), Gaps = 1/150 (0%)
Query: 74 AGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAF 133
+G + AIKD D+ G+ T GS + D A R A VV L L G +GKT L E AF
Sbjct: 13 SGKRVAIKDSIDIAGHPTRSGSRAFA-DASPATRHADVVQLALDAGWQIVGKTNLHELAF 71
Query: 134 GITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGIL 193
G+TG N GTP+NPQ P +PGGSSSGSA AVAA L D A+GTDT G VRVPA+ CGI
Sbjct: 72 GVTGINDWSGTPINPQAPDRVPGGSSSGSAAAVAAGLADIAIGTDTGGSVRVPAACCGIA 131
Query: 194 GYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
G +P++G VS +G P SLD VG A N
Sbjct: 132 GLKPTYGRVSRVGAQPAMSSLDCVGPFAAN 161
>gi|383792009|ref|YP_005476583.1| amidase [Spirochaeta africana DSM 8902]
gi|383108543|gb|AFG38876.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Spirochaeta africana DSM 8902]
Length = 493
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 123/419 (29%), Positives = 187/419 (44%), Gaps = 48/419 (11%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAGL F +KD V+G GS ++ + V LL GA +GKT +DEF
Sbjct: 77 LAGLPFGVKDNIAVQGQPLSCGS--RMLAGLQSPYSGTAVERLLSAGAVVVGKTNMDEFG 134
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G EN G VNP + GGSS GSA AVAA LV FALG+DT G VR PA FCG+
Sbjct: 135 MGSATENSALGETVNPWDSQRVAGGSSGGSAAAVAAGLVPFALGSDTGGSVRQPAGFCGV 194
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL------------LQLNAV 240
G +P++G VS G++ + SL+ +G+ R+ ++ V V+ + A
Sbjct: 195 YGLKPTYGAVSRYGLVAYASSLEVIGVFTRDLELMRTVFSVIRGSDGRDQTTIDWEAVAA 254
Query: 241 EPRRA-RRLIF--ADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPS 297
E + A RRL F D Q P + + + GY+ E +++ +A VP+
Sbjct: 255 ELKPAPRRLAFIAGDAGLQ----PDVARTYGQMRERARDCGYEIQE-IDLAT-LAYAVPA 308
Query: 298 LKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEE-----WVKSAKPRLGYNVFER 352
+ S A L + V RY + ++ E KS G V R
Sbjct: 309 YYTIATAEAS-----ANLARYNGV-----RYGHRPVFAESPVELMRKSRTEGFGDEVKLR 358
Query: 353 VLEAINTTQDNIKILY-----KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKK--T 405
++ + + + ++R ++ L L + LV+P PP K +
Sbjct: 359 IMLGTYVLRSGFQDQFYVRAQRIRTKLYQELASLFSGAQGLVLPVFPSPPFKRGGVELDA 418
Query: 406 YSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYD 464
+ + DR +++ ++SGC A P G + PI + + HG D+ LLD + +L D
Sbjct: 419 FQQKQGDR---FTTLANLSGCPACAFPAGTVDGLPIGMQIMGPHGSDERLLDIIAELRD 474
>gi|399018160|ref|ZP_10720345.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. CF444]
gi|398101946|gb|EJL92143.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Herbaspirillum sp. CF444]
Length = 390
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 92/154 (59%), Gaps = 1/154 (0%)
Query: 74 AGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAF 133
+G AIKD D++G T GS D A A VV LL G K + E A+
Sbjct: 25 SGPTVAIKDCIDIQGMQTRGGSAA-LADAAPAAVHADVVRRLLDAGWQITAKANMHELAY 83
Query: 134 GITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGIL 193
G+TG N GTP+NPQ P+ +PGGSSSG A AV A LVD A+G+DT G +R+PA+ CG++
Sbjct: 84 GMTGINDWSGTPLNPQDPARMPGGSSSGCAAAVGAGLVDVAIGSDTGGSIRLPAACCGVI 143
Query: 194 GYRPSHGTVSMIGVLPNSQSLDTVGLLARNASIL 227
G++PS G VS G P +LD VG AR +++
Sbjct: 144 GFKPSFGRVSRSGAYPQHSTLDCVGPFARRMALI 177
>gi|420254354|ref|ZP_14757362.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. BT03]
gi|398049279|gb|EJL41709.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. BT03]
Length = 379
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 117/362 (32%), Positives = 165/362 (45%), Gaps = 57/362 (15%)
Query: 51 AFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAV 110
AF+ F L PAA+ P AIKD DV GY T G+ D A A
Sbjct: 3 AFISEFTL-----SADPAAQGP----TIAIKDSIDVAGYPT-TGASRSLADAPPAAAHAE 52
Query: 111 VVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQL 170
VV LL G GKT + E AFG+TG N + GTPVNPQ + IPGGSSSGSA AV A+L
Sbjct: 53 VVQRLLDAGWRITGKTNMHELAFGMTGINDYTGTPVNPQDTARIPGGSSSGSASAVGAKL 112
Query: 171 VDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN-ASILHR 229
VD ALGTDT G +R PA+ CG++G +P+ G VS G +P +LD VG R+ A+++
Sbjct: 113 VDAALGTDTGGSIRGPAACCGVIGLKPTFGRVSRKGAVPRESTLDCVGPFTRDIATLVDA 172
Query: 230 VGHVLLQLNAVEPRRARR-------LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNP 282
+ + + +RA + AD + ++ S+AIE
Sbjct: 173 MAAIAPTFDTNAAKRANAGANVAIVSVDADAAIRQGVARAVQIAAFASRAIEL------- 225
Query: 283 EHMNVGQYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAK 342
+H LK L++ E + V++ K
Sbjct: 226 DH------------------------------LKEAFEAGLAVINVETARAFAHLVETRK 255
Query: 343 PRLGYNVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNT 402
LG +V R+ A+ TTQ + R AA+ R L++ +LV+PT+ P+ +
Sbjct: 256 --LGADVDARLRVAVQTTQAQLDAAEHARRAFTAAVDRALENADVLVLPTLPTLPITIEA 313
Query: 403 KK 404
+
Sbjct: 314 AR 315
>gi|94967532|ref|YP_589580.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Candidatus
Koribacter versatilis Ellin345]
gi|166217639|sp|Q1IUE4.1|GATA_ACIBL RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|94549582|gb|ABF39506.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
[Candidatus Koribacter versatilis Ellin345]
Length = 480
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 122/393 (31%), Positives = 171/393 (43%), Gaps = 41/393 (10%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAGL AIKDV KG T GS + A A VV L GA +GKT DEFA
Sbjct: 71 LAGLPVAIKDVISTKGVRTTAGSKIL--EEFIAPYDATVVQKLEAAGAVILGKTNCDEFA 128
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G + EN YG NP+ S +PGGSS GSA VAA +LG+DT G +R PASFCG+
Sbjct: 129 MGSSNENSAYGPVRNPRDKSRVPGGSSGGSAAVVAAGTAVTSLGSDTGGSIRQPASFCGV 188
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLA---RNASILHRV--GHVLLQLNAVE------ 241
+G P++G VS G++ + SLD +G A ++A+I+ V G + + E
Sbjct: 189 VGLMPTYGRVSRYGLIAFASSLDHIGPFAKDVKDAAIMLEVIAGRDPMDATSAEVAVPKY 248
Query: 242 ------PRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVG-QYIASN 294
P R ++ A + F P++K + +I++L+ E + V +
Sbjct: 249 SDEIGKPVRGMKIGVAKEYFGEGLDPEVKA--SVEASIQNLA-KAGAEIIEVSLPHTKYA 305
Query: 295 VPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVL 354
+P+ L A + + N L V S + E KT+ E + KS G V R++
Sbjct: 306 IPTYY-LVATAEASSN----LARFDGVRYSHRSKEAKTLSEMYRKSRDEGFGAEVKRRII 360
Query: 355 EAINTTQDNIKILY-----KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTK-----K 404
Y KVR + +V PT P KL K
Sbjct: 361 LGTYALSAGYYDAYYLKAQKVRTLLAQDFDEAFAKVDAIVTPTTPTPAFKLGEKADDPLA 420
Query: 405 TYSAEFHDRTLVLSSIGSMS---GCCQVAIPIG 434
Y A+ T L I +S G + +PIG
Sbjct: 421 MYLADIFTVTADLVGIPGISVPCGSSKDGLPIG 453
>gi|403053809|ref|ZP_10908293.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Acinetobacter
bereziniae LMG 1003]
Length = 492
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 88/152 (57%), Gaps = 2/152 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAG+ A KD+F +G T GS D+ + A VV G +GK +DEFA
Sbjct: 71 LAGVPLAHKDIFCTQGIKTSAGSK--MLDNFISPYDATVVAKAKAAGLVTLGKVNMDEFA 128
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G T E+ YG NP H+PGGSS GSA VAA L FA GTDT G +R PASFCG+
Sbjct: 129 MGSTSESSFYGATKNPWNLEHVPGGSSGGSAAVVAADLAPFATGTDTGGSIRQPASFCGL 188
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
G +P++G VS G++ + SLD G +AR+A
Sbjct: 189 TGLKPTYGRVSRFGMIAFASSLDQGGPMARSA 220
>gi|68468052|ref|XP_721865.1| potential mitochondrial glutamyl-tRNA amidotransferase [Candida
albicans SC5314]
gi|74591701|sp|Q5AK64.1|GATA_CANAL RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A,
mitochondrial; Short=Glu-AdT subunit A
gi|46443807|gb|EAL03086.1| potential mitochondrial glutamyl-tRNA amidotransferase [Candida
albicans SC5314]
Length = 450
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 108/178 (60%), Gaps = 4/178 (2%)
Query: 66 PPAARQPLAGLKFAIKD-VFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIG 124
P + PL+G + +KD + GY T ++E+ A+++ LL NG+ IG
Sbjct: 32 PTNSTGPLSGTTYIVKDNIATSHGYTTAASK---ILSNYESPFNAMIIDLLSSNGSKLIG 88
Query: 125 KTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVR 184
K+ LDEF G N ++ NP + +PGGSS GSA +VA ++ F++GTDT G VR
Sbjct: 89 KSNLDEFGMGSANYNSYFNKVTNPYDNTKVPGGSSGGSAASVAGKMCSFSIGTDTGGSVR 148
Query: 185 VPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
+PAS+C + G++P++G +S GV+P +Q+LDTVG++ N +I+ RV VL + + +P
Sbjct: 149 LPASYCNVFGFKPTYGRISRWGVIPYAQTLDTVGIIGENVNIIKRVYDVLNKYDDKDP 206
>gi|445423384|ref|ZP_21436622.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Acinetobacter sp. WC-743]
gi|444755764|gb|ELW80339.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
[Acinetobacter sp. WC-743]
Length = 492
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 88/152 (57%), Gaps = 2/152 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAG+ A KD+F +G T GS D+ + A VV G +GK +DEFA
Sbjct: 71 LAGVPLAHKDIFCTQGIKTSAGSK--MLDNFISPYDATVVAKAKAAGLVTLGKVNMDEFA 128
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G T E+ YG NP H+PGGSS GSA VAA L FA GTDT G +R PASFCG+
Sbjct: 129 MGSTSESSFYGATKNPWNLEHVPGGSSGGSAAVVAADLAPFATGTDTGGSIRQPASFCGL 188
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
G +P++G VS G++ + SLD G +AR+A
Sbjct: 189 TGLKPTYGRVSRFGMIAFASSLDQGGPMARSA 220
>gi|398886529|ref|ZP_10641403.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM60]
gi|398189439|gb|EJM76714.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM60]
Length = 390
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 171/362 (47%), Gaps = 41/362 (11%)
Query: 75 GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAE---RTAVVVTLLLKNGATCIGKTVLDEF 131
G + AIKD D+ G+ T GS R EAE R A VV +L G +GKT + E
Sbjct: 14 GKRVAIKDSIDIAGHPTRSGS----RAFAEAEPALRNADVVDAILDAGWQIVGKTNMHEL 69
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
AFG+TG N GTP+NPQ P +PGGSSSGSA AVAA L D A+GTDT G VRVPA+ CG
Sbjct: 70 AFGVTGINDWTGTPINPQAPDRVPGGSSSGSAAAVAAGLADIAIGTDTGGSVRVPAACCG 129
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
I G +P++G VS +G P + SLD VG A + + L + + + P
Sbjct: 130 IAGLKPTYGRVSRVGAHPLASSLDCVGPFAADMADL------IAAMQVICPG-------- 175
Query: 252 DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENG 311
FQ+ +P A H+ A++ RA +
Sbjct: 176 ---FQVQGLPS-------GNASVGFLEVDCEPHLQACLGAAAD-------RAGWRRSQLH 218
Query: 312 TATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVR 371
+ +A + L++ +E + + K +G +V +R+L A T+ ++ KVR
Sbjct: 219 LSDFEAAFAAGLTVINFENWAAFGHL--TGKGLIGADVEQRLLAASRTSAADLAQAEKVR 276
Query: 372 NEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAI 431
+ L+D +L++PT+ P L ++ S T ++ ++SG + +
Sbjct: 277 ARFSQQVDAALEDFAVLLLPTMPSLPPTLVEARSASKAVAGMTPLVRPF-NLSGHPALTV 335
Query: 432 PI 433
P+
Sbjct: 336 PV 337
>gi|332285874|ref|YP_004417785.1| amidase [Pusillimonas sp. T7-7]
gi|330429827|gb|AEC21161.1| amidase [Pusillimonas sp. T7-7]
Length = 447
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 191/400 (47%), Gaps = 38/400 (9%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
AR P+ GL ++KD+FD+ G T GS K D A++ A++V L+ GA +GKT +
Sbjct: 65 ARSPIDGLPVSVKDLFDISGDTTLAGSTVLK-DAPAAQQNALIVQRLIGAGAVIMGKTNM 123
Query: 129 DEFAFGITGENKHYGTPVNP--QMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
EFAF G N HYGTP +P + IPGGSSSG+ V+VA Q+ A+GTDT G VR+P
Sbjct: 124 TEFAFSGLGLNPHYGTPSSPWDRANKRIPGGSSSGAGVSVADQMAVAAIGTDTGGSVRIP 183
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRAR 246
++FCG+ G++P+ +S G LP S SLD++G LA + S + +L A +PR
Sbjct: 184 SAFCGLTGFKPTARRISQTGALPLSFSLDSIGPLAASVSCCALLDGIL----AGQPRV-- 237
Query: 247 RLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQST 306
+ P LK + + L G + +V + + +L+ AQ
Sbjct: 238 ----------MPVAPALKQLRFAVPSAVVLDGADD----HVRRTFEQTLATLQAGGAQVD 283
Query: 307 S---PENGTATLKALSSVMLSLQRYEF-KTIYEEWVKSAKPRLGYNVFERVLEAINTTQD 362
+ PE ++ + + + + + E+ PR V R++ N +
Sbjct: 284 TIDLPEFQELAFINRQGGLVCAEAWAWHEKLLEQHADQYDPR----VASRIMRGKNISTP 339
Query: 363 NIKILYKVRNEMRAALQRLLKDDKILVIPTVS--DPPLKLNTKKTYSAEFHDRTLVLSS- 419
L + R+ A+LQ+ L L++PTV P +K +++ + F L+L +
Sbjct: 340 AYIELLQTRSAWIASLQQRLHHYDALLMPTVPVVAPTIK-ELQESDESYFAANGLILRNP 398
Query: 420 --IGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
I GC ++IP P+ + D+ +L+
Sbjct: 399 TLINFFDGCA-LSIPCHAAGTAPVGLMVAGPAMHDQHILN 437
>gi|377569681|ref|ZP_09798840.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
[Gordonia terrae NBRC 100016]
gi|377533138|dbj|GAB44005.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
[Gordonia terrae NBRC 100016]
Length = 409
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 180/408 (44%), Gaps = 35/408 (8%)
Query: 66 PPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGK 125
P A PL+GL+ +KD +V G + GS + A A VT L K G
Sbjct: 23 PDVASGPLSGLRIGVKDNIEVGGVRSTCGSEYFA--DRVASADAACVTALKKAGGVITST 80
Query: 126 TVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
L EFA G+T +N G PVNP +PGGSS GS VAVAA +VD +LGTDT G +R+
Sbjct: 81 LNLAEFAVGVTSQNSASGGPVNPWAADRVPGGSSGGSGVAVAAGIVDVSLGTDTGGSIRL 140
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRA 245
PA+ CG+ G RPS G + M G+ P S DTVG LAR+A+++ VL ++ P R+
Sbjct: 141 PAACCGVTGLRPSVGVLDMTGIFPVSADFDTVGPLARSAALVRETFAVLAGADSA-PLRS 199
Query: 246 RRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQS 305
L A +P + A+ ++G + +VP AQ
Sbjct: 200 GSLRIA--------LPWPFVTEDVDPAVRDAVVGAADLLRDLGHSVV-DVPVPHSESAQ- 249
Query: 306 TSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIK 365
V+ +L + + E ++ R ER+L ++ + +
Sbjct: 250 --------------DVVYTLIYSDLAKTHAERLRDEPSRFQSATRERILLGLSISDGQVT 295
Query: 366 ILYKVRNEMRAALQRLLKDDKILVIPTV-SDPPLKLNTKKTYSAEFHDRTLVLSSIGSMS 424
+ R+ RAA L D +++ P + +D PL L A+ R L+ S+
Sbjct: 296 AARRHRDVFRAATAELFDDVDVVLTPAMPADVPL-LGGGDAVVAQAR-RMGQLTYPWSLH 353
Query: 425 GCCQVAIPIGKY-NEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVN 471
+A+P+G + + P+ HG + T+ L + QE +
Sbjct: 354 DGPTLALPVGVHPSGMPVGAQLTAAHGAEA----TLFALAEQFQEHTD 397
>gi|300705048|ref|YP_003746651.1| glutamyl-tRNA amidotransferase/amidase (gata) [Ralstonia
solanacearum CFBP2957]
gi|299072712|emb|CBJ44065.1| putative Glutamyl-tRNA amidotransferase/amidase (gatA) [Ralstonia
solanacearum CFBP2957]
Length = 448
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 124/396 (31%), Positives = 170/396 (42%), Gaps = 43/396 (10%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTA--VVVTLLLKNGATCIGKTVLDE 130
LAGL +IKD+FDV G V+ GS + H+ TA V V L GA +G+T + E
Sbjct: 73 LAGLPVSIKDLFDVAGQVSAAGS---RALAHQPPATADAVAVARLRAAGAVLLGRTNMSE 129
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FAF G N HYGTP P + GGS+SG AV VA + ALGTDT G +R+PA+FC
Sbjct: 130 FAFSGLGLNPHYGTPRTPADGTRAAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPAAFC 189
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL----LQLNAVEPRRAR 246
+ G++P+ V M G +P S SLD+ G LA + V VL L +AV P
Sbjct: 190 ALTGFKPTARRVPMAGGVPLSTSLDSGGPLANSVDCCAIVDAVLSGQALDTDAV-PLAGL 248
Query: 247 RLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIAS-NVPSLKGLRAQS 305
RL D + T +A+ L G I + P L L
Sbjct: 249 RLGLTRDYVGADLDDTVAT--AFQRAVMRLE--------QAGARIVRFDFPELLQL---- 294
Query: 306 TSPE-NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNI 364
PE NG L A E + + A+ + V R+ T
Sbjct: 295 --PEINGGGGLPA----------AESWAWHRPHLARAEAQYDRRVAARIRRGEQMTAAAY 342
Query: 365 KILYKVRNEMRAALQRLLKDDKILVIPTVSD-PPLKLNTKKTYSAEFHDRTLVL---SSI 420
+ R M AA ++ L + ++PTV+ PP + + F LVL S I
Sbjct: 343 LDVMAARERMIAAARKRLGNLDAWLMPTVAIVPPEVAPLEADDTQFFRTNALVLRNPSVI 402
Query: 421 GSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+ GC + +PI E P+ +S D +L
Sbjct: 403 NFLDGCA-LTLPIHGAGELPVGLSLCGLADDDARIL 437
>gi|68467733|ref|XP_722025.1| potential mitochondrial glutamyl-tRNA amidotransferase [Candida
albicans SC5314]
gi|46443972|gb|EAL03250.1| potential mitochondrial glutamyl-tRNA amidotransferase [Candida
albicans SC5314]
Length = 450
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 108/178 (60%), Gaps = 4/178 (2%)
Query: 66 PPAARQPLAGLKFAIKD-VFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIG 124
P + PL+G + +KD + GY T ++E+ A+++ LL NG+ IG
Sbjct: 32 PTNSTGPLSGTTYIVKDNIATSHGYTTAASK---ILSNYESPFNAMIIDLLSSNGSKLIG 88
Query: 125 KTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVR 184
K+ LDEF G N ++ NP + +PGGSS GSA +VA ++ F++GTDT G VR
Sbjct: 89 KSNLDEFGMGSANYNSYFNKVTNPYDNTKVPGGSSGGSAASVAGKMCSFSIGTDTGGSVR 148
Query: 185 VPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
+PAS+C + G++P++G +S GV+P +Q+LDTVG++ N +I+ RV VL + + +P
Sbjct: 149 LPASYCNVFGFKPTYGRISRWGVIPYAQTLDTVGIIGENVNIIKRVYDVLNKYDDKDP 206
>gi|353558702|sp|C4YRY0.1|GATA_CANAW RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A,
mitochondrial; Short=Glu-AdT subunit A
gi|238882845|gb|EEQ46483.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 450
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 107/178 (60%), Gaps = 4/178 (2%)
Query: 66 PPAARQPLAGLKFAIKD-VFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIG 124
P + PL+G + +KD + GY T ++E+ A ++ LL NG+ IG
Sbjct: 32 PTNSTGPLSGTTYIVKDNIATSHGYTTAASK---ILSNYESPFNATIIDLLSSNGSKLIG 88
Query: 125 KTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVR 184
K+ LDEF G N ++ NP + +PGGSS GSA +VA ++ F++GTDT G VR
Sbjct: 89 KSNLDEFGMGSANYNSYFNKVTNPYDNTKVPGGSSGGSAASVAGKMCSFSIGTDTGGSVR 148
Query: 185 VPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
+PAS+C + G++P++G +S GV+P +Q+LDTVG++ N +I+ RV VL + + +P
Sbjct: 149 LPASYCNVFGFKPTYGRISRWGVIPYAQTLDTVGIIGENVNIIKRVYDVLNKYDDKDP 206
>gi|15920693|ref|NP_376362.1| enantiomer-selective amidase [Sulfolobus tokodaii str. 7]
gi|15621476|dbj|BAB65471.1| amidase [Sulfolobus tokodaii str. 7]
Length = 396
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 96/164 (58%), Gaps = 2/164 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L LKF IKD+ KG T GS K D +E A +V +L G IGKT EFA
Sbjct: 29 LRDLKFGIKDIILTKGVRTTAGSKILK-DFIPSE-NAYIVDKILAEGGEIIGKTNTHEFA 86
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G T + G NP P I GGSS GSAVAVA LVD +GTDT G VR+PAS CG+
Sbjct: 87 IGATNTSSLIGPAKNPYDPERISGGSSGGSAVAVALGLVDVGIGTDTGGSVRIPASLCGV 146
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ 236
+G++P++G + GV+P S + DT+G LA++ S++ R L +
Sbjct: 147 IGFKPTYGIIPTDGVIPFSWTFDTIGFLAKDISLIRRTIEALAE 190
>gi|134100032|ref|YP_001105693.1| enantiomer-selective amidase [Saccharopolyspora erythraea NRRL
2338]
gi|291002978|ref|ZP_06560951.1| enantiomer-selective amidase [Saccharopolyspora erythraea NRRL
2338]
gi|133912655|emb|CAM02768.1| enantiomer-selective amidase [Saccharopolyspora erythraea NRRL
2338]
Length = 445
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 171/392 (43%), Gaps = 40/392 (10%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ A+KD+ + G T GS + H + A V L GA +GKT EF
Sbjct: 79 PLHGIPVAVKDIIETAGMRTTMGSAHFA--DHVSTADAECVRRLRAGGAVIVGKTTTHEF 136
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+G TG+ G NP P+ + GGSS GSA AVAA +V A+GTDT G VR+PA+ CG
Sbjct: 137 AYGPTGDRAAGGASRNPHDPAAMSGGSSGGSAAAVAAGMVPLAVGTDTGGSVRIPAALCG 196
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
+ G++P++G V GV P S+SLD VG++AR VL L A PR A
Sbjct: 197 VAGFKPAYGAVPADGVFPLSRSLDHVGVIARTPRDCRTAYRVLAGLRAGPPRSAGGPATV 256
Query: 252 DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENG 311
I + + + +++A S Q E + GLR NG
Sbjct: 257 GWIAPGALFETDREVEELARAALSGRAVQEVELGDA-----------AGLRQTY----NG 301
Query: 312 TATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVR 371
+Q E ++ E V A V ER+ A T ++ R
Sbjct: 302 -------------IQDAEAYAVHAERVADAPELFTPEVLERLQAAARTPGWRHVRAFEER 348
Query: 372 NEMRAALQRLLKDDKILVIPT-------VSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMS 424
RA + RLL +L +PT V +++N ++ E L L+S +++
Sbjct: 349 QRWRAEVARLLSHHDLLALPTTPFAAPAVGQREIEVNGREV---EVRWGLLSLTSPWNIA 405
Query: 425 GCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
G + +P+G P+ + + G + L
Sbjct: 406 GVPALTVPVGTSRGLPVGLQLVCRPGDEDLLF 437
>gi|54294624|ref|YP_127039.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Legionella
pneumophila str. Lens]
gi|81601316|sp|Q5WVW0.1|GATA_LEGPL RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|53754456|emb|CAH15940.1| Glutamyl-tRNA(Gln) amidotransferase (subunit A) [Legionella
pneumophila str. Lens]
Length = 483
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 184/406 (45%), Gaps = 28/406 (6%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
+PL G+ A+KD+F K T S + +A A +VT +NGA IGKT +DE
Sbjct: 65 KPLTGIPMALKDLFCTKRLNTTCASKMLA--NFQAPYDATIVTKFKQNGAIIIGKTNMDE 122
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FA G + EN ++G+ NP +PGGSS GSA AVA LV FA+G+DT G +R PA+FC
Sbjct: 123 FAMGSSNENSYFGSVKNPWDRERVPGGSSGGSAAAVAGSLVPFAIGSDTGGSIRQPAAFC 182
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI- 249
GI G +P++G VS G++ + SLD G A++A L + H + ++ + A R+I
Sbjct: 183 GISGIKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAMILHCIAGFDSKDSTSADRVIP 242
Query: 250 -FADDIFQ-LSKV----PKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRA 303
++ +I + + K+ P + K I+ N+G I L+ L
Sbjct: 243 DYSTEIKKPVDKIRIGLPSCFFQPQVEKGIQDAIHDAVKLFENLGAEIIEIDLKLQPLWV 302
Query: 304 QS---TSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTT 360
+ ++ L + + T+ E S G V R+L +
Sbjct: 303 PCYYVIACAEASSNLSRYDGIRFGHRSKSASTLIELITNSRSEGFGNEVKRRILTGTHVL 362
Query: 361 QDNIKILY-----KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTK-----KTYSAEF 410
Y KVR +R L +L +++ PT KL K + Y A+
Sbjct: 363 SSGFFDAYYLHAQKVRRLIRDELITILNSVDVILGPTTPTTAFKLGEKIDDPIQNYLAD- 421
Query: 411 HDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
V + +++G ++IP G N+ PI + + H + LL
Sbjct: 422 -----VFTVAANLAGLPAISIPTGFENKLPIGLQLMGKHFSENRLL 462
>gi|170690775|ref|ZP_02881941.1| Amidase [Burkholderia graminis C4D1M]
gi|170144024|gb|EDT12186.1| Amidase [Burkholderia graminis C4D1M]
Length = 378
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/354 (31%), Positives = 170/354 (48%), Gaps = 41/354 (11%)
Query: 51 AFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAV 110
AFL++F+L+ P+ P AIKD D+ GY T S D A R A
Sbjct: 3 AFLQQFDLVAQPRANAP---------TIAIKDSIDIAGYPTTAASRALA-DTPPASRHAE 52
Query: 111 VVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQL 170
VV LL G GKT + E AFG+TG N GTP NPQ + IPGGSSSGSA AV L
Sbjct: 53 VVQRLLDAGWRITGKTNMHELAFGMTGINDFSGTPRNPQDMARIPGGSSSGSASAVGLGL 112
Query: 171 VDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRV 230
VD ALGTDT G VR PA+ CG++G +P+ G VS GV P +LD VG AR+ + +
Sbjct: 113 VDAALGTDTGGSVRGPAACCGVIGLKPTFGRVSREGVSPRVTTLDCVGPFARD---MKTI 169
Query: 231 GHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQY 290
V+L A++P F++ + + + ++ + E + +
Sbjct: 170 IDVML---AIDPS-----------FEVDRARRDARTTRV-----AMLDVEADEEIR--RA 208
Query: 291 IASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVF 350
IA+ V R++ S + +++ + L++ E + V K LG ++
Sbjct: 209 IAAAV-----TRSELGSHDVRLPSMRDAFAAGLAVINAETWRAFGHLVDGGK--LGADIE 261
Query: 351 ERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKK 404
R+ A NT ++ ++R+ + R L+ +L++PT+ P+ + +
Sbjct: 262 ARLRAAANTKAADLDSAERIRHIFTDEVDRALEHADVLILPTMPSLPITVEAAR 315
>gi|187921072|ref|YP_001890104.1| amidase [Burkholderia phytofirmans PsJN]
gi|187719510|gb|ACD20733.1| Amidase [Burkholderia phytofirmans PsJN]
Length = 466
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 89/153 (58%), Gaps = 8/153 (5%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSP---DWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
L GL IKD + + T FG+ D++ A VV + + G GK L
Sbjct: 62 LPGLPIGIKDSYMTRDLPTSFGTAVAADFR-----PTTDARVVKAMREAGLLVFGKNNLV 116
Query: 130 EFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
E ++G+TG N HYG NP P HI GGSS G A +VAA+LV ALG DT+G +RVP+S
Sbjct: 117 EMSYGLTGLNGHYGQAKNPYNPLHITGGSSCGGAASVAARLVPAALGGDTVGSIRVPSSL 176
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLAR 222
CG++G++P+ G S GV P S +LDT G +AR
Sbjct: 177 CGVVGFKPTPGRWSSKGVAPISGTLDTTGAIAR 209
>gi|158312532|ref|YP_001505040.1| amidase [Frankia sp. EAN1pec]
gi|158107937|gb|ABW10134.1| Amidase [Frankia sp. EAN1pec]
Length = 523
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/171 (46%), Positives = 99/171 (57%), Gaps = 3/171 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL GL FA+KD D+ G T G PD+ R TA V LL GA C+GKT LD+F
Sbjct: 104 PLFGLPFAVKDNIDIAGLPTTAGCPDFSR---LPAGTAPAVARLLAAGAVCVGKTNLDQF 160
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G++G YG P +P P I GGSSSGS VAVA LV FA+GTDT G RVPA+
Sbjct: 161 ATGLSGTRSPYGIPASPFDPYMIAGGSSSGSGVAVADGLVTFAVGTDTAGSGRVPAALTN 220
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
+G +PS G VS GV+P +SLD + A + +RV V+ + +P
Sbjct: 221 TVGLKPSRGLVSTRGVVPACRSLDCPSVFALSVPDAYRVLSVMSGYDEEDP 271
>gi|121604659|ref|YP_981988.1| amidase [Polaromonas naphthalenivorans CJ2]
gi|120593628|gb|ABM37067.1| Amidase [Polaromonas naphthalenivorans CJ2]
Length = 450
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 120/409 (29%), Positives = 182/409 (44%), Gaps = 33/409 (8%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ ++KD+FDV G VT GS A AV V L GA +G++ + EFA
Sbjct: 70 LTGIPVSVKDLFDVAGQVTTAGSTVLA-GAAPASTDAVAVARLRAAGAVLVGRSNMVEFA 128
Query: 133 FGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
F G N HYGTPVNP S IPGGSSSG+AV+VA LG+DT G +R+PA+ C
Sbjct: 129 FSGVGINPHYGTPVNPADASIERIPGGSSSGAAVSVATGAALVGLGSDTGGSIRIPAALC 188
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIF 250
GI+G++ + V G +P S SLDTV + R+ V VL ARR+
Sbjct: 189 GIVGFKSTARLVPATGAVPLSTSLDTVCAVTRSVHDAVTVHEVL---------SARRVQL 239
Query: 251 ADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPEN 310
A ++ +T+ + ++S + V + + + + S N
Sbjct: 240 AGKPLSSCRIAVARTL--MQDGLDSTVAQAFEHSLRVLRQAGARIEEIALEEIGELSAIN 297
Query: 311 GTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKV 370
+ L A S + K I E + PR+ + A + D I +L
Sbjct: 298 ASGGLSAAES-----HAWHRKLIAEHEAQY-DPRVALRILR---GARMSAADYIDLLAAR 348
Query: 371 RNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVL---SSIGSMSGCC 427
+N + RL D +L PTV + + + EF +L +S+ +M C
Sbjct: 349 QNWISRMEARLSHFDAVLS-PTVPIVAPSIASVLDHDDEFFRINALLLRNTSVANMLDGC 407
Query: 428 QVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNL 476
++IP + P+ + + +H D VLDL +LQ + +A +L
Sbjct: 408 AISIPCQTPGQLPVGL--MLWHAA--LHDDNVLDL--ALQVEAVLAISL 450
>gi|241956013|ref|XP_002420727.1| glutamyl-tRNA(gln) amidotransferase subunit, mitochondrial
precursor, putative [Candida dubliniensis CD36]
gi|223644069|emb|CAX41812.1| glutamyl-tRNA(gln) amidotransferase subunit, mitochondrial
precursor, putative [Candida dubliniensis CD36]
Length = 450
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 108/178 (60%), Gaps = 4/178 (2%)
Query: 66 PPAARQPLAGLKFAIKD-VFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIG 124
P + PL+G + +KD + GY T ++E+ A ++ LL NG+ IG
Sbjct: 32 PTNSAGPLSGTTYIVKDNIVTNHGYTTAASK---ILSNYESPFNATILDLLSNNGSKLIG 88
Query: 125 KTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVR 184
K+ LDEF G N ++ +NP + +PGGSS GSA +VA ++ F++GTDT G VR
Sbjct: 89 KSNLDEFGMGSANYNSYFNKVINPYDDTKVPGGSSGGSAASVAGKMCSFSIGTDTGGSVR 148
Query: 185 VPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
+PAS+C + G++P++G +S GV+P +Q+LDTVG++ N +I+ RV VL + + +P
Sbjct: 149 LPASYCNVFGFKPTYGRISRWGVIPYAQTLDTVGIIGDNVNIIKRVYDVLNRCDNKDP 206
>gi|126459486|ref|YP_001055764.1| amidase [Pyrobaculum calidifontis JCM 11548]
gi|126249207|gb|ABO08298.1| Amidase [Pyrobaculum calidifontis JCM 11548]
Length = 400
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/158 (48%), Positives = 95/158 (60%), Gaps = 3/158 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L GL A+KD +V G G+P +R A TA VV L+ GA IGKT + E A
Sbjct: 41 LCGLAVAVKDNIEVAGMPITNGAPYMRR---VATETAPVVAALMAEGAVVIGKTNMHELA 97
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G T N H+G NP P+ I GGSS GSA AVA + D LGTDT G VR+PA+ CG+
Sbjct: 98 LGATNINPHFGPTRNPHDPTRITGGSSGGSAGAVAIGVADVGLGTDTGGSVRIPAALCGV 157
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRV 230
+GY+P +G + GVLP +QSLD VGL+ R+ L RV
Sbjct: 158 VGYKPPYGKLPTRGVLPLAQSLDHVGLITRSVDDLVRV 195
>gi|163855151|ref|YP_001629449.1| amidase [Bordetella petrii DSM 12804]
gi|163258879|emb|CAP41178.1| putative amidase [Bordetella petrii]
Length = 538
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 100/173 (57%), Gaps = 1/173 (0%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R PL G+ IKD+FD +G V G+G+P +RD A+ A VV L GA +G +
Sbjct: 126 RGPLHGMPVGIKDMFDRQGRVAGWGTP-LRRDSAPADADATVVARLRAAGAVVLGVQHMA 184
Query: 130 EFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
EFA TG N YG NP + GGSSSG+A++VAA V A+G+DT G VR+PA+
Sbjct: 185 EFAMSPTGWNASYGPGRNPWDTGRVSGGSSSGAAMSVAAGHVPLAIGSDTGGSVRLPAAL 244
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
CG+ G +P+ +S+ G +P S SLD +G LA +A + L +A +P
Sbjct: 245 CGLTGLKPTQHRISVAGAMPLSPSLDCIGPLAWSAELCGHACRALAGADAADP 297
>gi|326315597|ref|YP_004233269.1| amidase [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323372433|gb|ADX44702.1| Amidase [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 457
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 96/153 (62%), Gaps = 1/153 (0%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
PLAGL ++KD+FDV+G VT GS D A AV V L GA +G+T + E
Sbjct: 73 SPLAGLPVSVKDLFDVRGQVTRAGSAVLA-DTGPAAHDAVAVARLRAAGAVLLGRTNMSE 131
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FAF G N H+GTP NP+ + GGSSSG+A VA L ALGTDT G +R+P++FC
Sbjct: 132 FAFSGLGLNPHHGTPANPRDAGRVTGGSSSGAAATVALDLAAAALGTDTGGSIRIPSAFC 191
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
G+ G++P+ V + G P S+SLD++G LAR+
Sbjct: 192 GLTGFKPTARRVPLAGAYPLSRSLDSIGPLARS 224
>gi|416015196|ref|ZP_11562826.1| amidase [Pseudomonas syringae pv. glycinea str. B076]
gi|416028485|ref|ZP_11571430.1| amidase [Pseudomonas syringae pv. glycinea str. race 4]
gi|320325381|gb|EFW81447.1| amidase [Pseudomonas syringae pv. glycinea str. B076]
gi|320327474|gb|EFW83486.1| amidase [Pseudomonas syringae pv. glycinea str. race 4]
Length = 446
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 90/154 (58%), Gaps = 2/154 (1%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
PL G+ + KD V+G G+ A++ A +V+ L GA GK + E
Sbjct: 61 NPLWGVPVSFKDNICVRGLPLTAGTR--GMSGFVADQDAAIVSQLKALGAVVAGKNNMHE 118
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
+FG+T N H+G NP P + GGSS GSAVAVA+ +V ++GTDT G +R+PA+FC
Sbjct: 119 LSFGVTSINPHWGAVGNPVAPGYCAGGSSGGSAVAVASGIVPLSVGTDTGGSIRIPAAFC 178
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
GI G+RP+ G S G++P S + D VGLL R A
Sbjct: 179 GITGFRPTTGRWSTAGIIPVSHTKDCVGLLTRTA 212
>gi|393773316|ref|ZP_10361714.1| amidase [Novosphingobium sp. Rr 2-17]
gi|392721196|gb|EIZ78663.1| amidase [Novosphingobium sp. Rr 2-17]
Length = 589
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/171 (42%), Positives = 103/171 (60%), Gaps = 3/171 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ FA+KD DV G+ T P + ++ E +A V+ LL GA C+GKT LD+F
Sbjct: 72 PLAGVPFAVKDNIDVAGFETTAACPAFA---YQPEASAGVIERLLAAGALCVGKTNLDQF 128
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G+ G YG P N ++ GGSSSGS++AVAA LV FALGTDT G RVPA+F
Sbjct: 129 ATGLVGTRSPYGIPRNAYNLGYVSGGSSSGSSIAVAAGLVAFALGTDTAGSGRVPAAFNH 188
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
++G++PS G S G++P ++LD + + + + + V +A +P
Sbjct: 189 LIGFKPSKGRWSTRGLVPACRTLDCITVFTDDTTDAGLIDQVAAGFDAADP 239
>gi|121607823|ref|YP_995630.1| amidase [Verminephrobacter eiseniae EF01-2]
gi|121552463|gb|ABM56612.1| Amidase [Verminephrobacter eiseniae EF01-2]
Length = 576
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/205 (42%), Positives = 113/205 (55%), Gaps = 9/205 (4%)
Query: 51 AFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAV 110
A++ERF QP + PLAGL+FAIKD D G+ T P++ + A
Sbjct: 11 AWIERFA-----QPLAGRSTGPLAGLRFAIKDNIDALGWPTTAACPEFA---YRPREHAT 62
Query: 111 VVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQL 170
VV LL GA+ +GKT LD+FA G+ G YG N ++ GGSSSGSA VA
Sbjct: 63 VVRKLLDAGASLVGKTNLDQFACGLNGTRSPYGAVPNAFHADYVSGGSSSGSAYVVATGQ 122
Query: 171 VDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRV 230
VDFALGTDT G RVPA I+G +PS G +S GV+P +QS+D V + AR ++ RV
Sbjct: 123 VDFALGTDTAGSGRVPAGLNNIVGIKPSRGLLSARGVVPAAQSVDCVSIFARTVAMAARV 182
Query: 231 GHVLLQLNAVEPRRARRLIFADDIF 255
V +A +P +R L A F
Sbjct: 183 LQVAQGPDAQDP-YSRTLQLASQPF 206
>gi|254444029|ref|ZP_05057505.1| Amidase, putative [Verrucomicrobiae bacterium DG1235]
gi|198258337|gb|EDY82645.1| Amidase, putative [Verrucomicrobiae bacterium DG1235]
Length = 431
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 160/365 (43%), Gaps = 30/365 (8%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L+G+ F +KD+FD GY T S + R A + GA GKT L+EFA
Sbjct: 65 LSGVPFLLKDLFDFPGYPTTASSLFLTDVRPKPTREAALSKAFRAQGAVFAGKTHLNEFA 124
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+G++GEN +G +P P + GGSSSGSA AV + +V A GTDT G +RVP ++CGI
Sbjct: 125 YGLSGENPTFGNCPHPIYPERLSGGSSSGSAWAVRSGIVPIATGTDTGGSIRVPTAWCGI 184
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G R S S G P + S DT G A + LL P+R +
Sbjct: 185 YGLRLSPNEWSSKGCFPLAPSFDTAGWFCSTAEDMRLCIETLLS-----PKRGK------ 233
Query: 253 DIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGT 312
L V L+++ +S + SG +V + ++ + E
Sbjct: 234 -TSPLRGVSLLESVKDLSIEFRAKSG---------------DVLEILNAQSDPSVTEAYR 277
Query: 313 ATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRN 372
T ++++ LQ E +++ W+ + K R V++R+ A + T I K
Sbjct: 278 VTTRSITQSYSILQSLEALQVHKAWIDAHKKRYDPVVWQRIDRARHWTPAQIDDAKKTEA 337
Query: 373 EMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIP 432
+ Q + +V+P P + + ++ EF L +++ GS + C + IP
Sbjct: 338 RIIDFFQACFERYDFIVLPATQSPAI---SAAEHTDEFRTNLLAITAPGSFARCPVLTIP 394
Query: 433 IGKYN 437
I N
Sbjct: 395 IQLKN 399
>gi|379004675|ref|YP_005260347.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase
[Pyrobaculum oguniense TE7]
gi|375160128|gb|AFA39740.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit-related amidase
[Pyrobaculum oguniense TE7]
Length = 401
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 154/325 (47%), Gaps = 41/325 (12%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L GL A+KD +V G G+P +R A+RTA VV L+ GA IGKT + E A
Sbjct: 44 LCGLVVAVKDNIEVAGMPITNGAPYMRR---MADRTAPVVRRLIAEGAVVIGKTNMHELA 100
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G T N HYG NP PS I GGSS GSA AVA + D +GTDT G VR+PA+ CG+
Sbjct: 101 LGATNINPHYGPTRNPHDPSRITGGSSGGSAGAVAIGVADLGVGTDTGGSVRIPAALCGV 160
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNAS----ILHRVGHVLLQLNAVEPRRARRL 248
+GY+P +G + GVLP +QSLD VG + R IL G +L ++ R L
Sbjct: 161 VGYKPPYGKIPTEGVLPLAQSLDHVGFITRTVKELVHILSAAGWGPAELPQMKRFRFAVL 220
Query: 249 I-FADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
+ A++ + K K + V +ES+ G ++ ++ G+Y A
Sbjct: 221 MGVAENTKHVDKA-FWKAVSV----LESIGGIRDEVFIDAGKYGA--------------- 260
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
A ++++LS E Y +++SA +G +V +
Sbjct: 261 ---------ARAAILLS----EAAANYYHYLRSAAEHMGRDVAALLSAGAALPAVAYITA 307
Query: 368 YKVRNEMRAALQRLLKDDKILVIPT 392
+V+ E + L K ++V PT
Sbjct: 308 KRVKEEATRFFESLFKKYDVVVTPT 332
>gi|227827649|ref|YP_002829429.1| amidase [Sulfolobus islandicus M.14.25]
gi|229584853|ref|YP_002843355.1| amidase [Sulfolobus islandicus M.16.27]
gi|238619817|ref|YP_002914643.1| amidase [Sulfolobus islandicus M.16.4]
gi|385773319|ref|YP_005645885.1| amidase [Sulfolobus islandicus HVE10/4]
gi|385775951|ref|YP_005648519.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Sulfolobus
islandicus REY15A]
gi|227459445|gb|ACP38131.1| Amidase [Sulfolobus islandicus M.14.25]
gi|228019903|gb|ACP55310.1| Amidase [Sulfolobus islandicus M.16.27]
gi|238380887|gb|ACR41975.1| Amidase [Sulfolobus islandicus M.16.4]
gi|323474699|gb|ADX85305.1| aspartyl/glutamyl-tRNA amidotransferase subunit A, GatA [Sulfolobus
islandicus REY15A]
gi|323477433|gb|ADX82671.1| amidase [Sulfolobus islandicus HVE10/4]
Length = 397
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 185/389 (47%), Gaps = 42/389 (10%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L + F IKDV KG T GS +++ ++ A VV +L+ G IGKT EFA
Sbjct: 27 LKDVTFGIKDVILTKGIRTTAGSRIL--ENYVPQKNAYVVDAILREGGKIIGKTNTHEFA 84
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G T + G NP P I GGSS GSAVAV ++D +GTDT G VR+P+S CG+
Sbjct: 85 LGATNTSSIGGPARNPIDPERISGGSSGGSAVAVKLDMIDVGIGTDTGGSVRIPSSLCGV 144
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLAR-NASILHRVGHVLL--QLNAVEPRRAR--- 246
+G++P+ G + GV+P S SLDTVG++ + N +L RV +L + VE + R
Sbjct: 145 IGFKPTTGLIPTDGVIPFSWSLDTVGIIVKDNIGLLRRVFDAILPNEKKKVEIAKLRTRP 204
Query: 247 RL-IFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQS 305
RL +F D ++S++ LK I+ LS Y + + ++P L+
Sbjct: 205 RLGLFLFDEMEVSRI-LLKEIYA------KLSSYFD--------IVEVDLPLLR------ 243
Query: 306 TSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIK 365
+ G+ T + +S E + +++W+ + + + +L+ + + +
Sbjct: 244 ---QYGSKTRRTISLA-------EASSYHKDWITENSDKYFKDTYTLLLDGMKISATDYI 293
Query: 366 ILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSG 425
+ R + ++ K+ ++ PT K++ + +F + + + + ++ G
Sbjct: 294 DAIRYRRVLIEEYIKVFKNIDFILSPTTKIVAPKISDVLSNPLQFREYLIANTELFNVVG 353
Query: 426 CCQVAIPIGKYNEHPIS--ISFITYHGGD 452
++IP NE P+ IS Y GD
Sbjct: 354 APSISIPFSTLNELPVGLMISGELYKDGD 382
>gi|385209497|ref|ZP_10036365.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. Ch1-1]
gi|385181835|gb|EIF31111.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Burkholderia sp. Ch1-1]
Length = 374
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/149 (50%), Positives = 92/149 (61%), Gaps = 1/149 (0%)
Query: 75 GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFG 134
G AIKD D+ GY T S D A+R A VV LL G +GKT + E AFG
Sbjct: 14 GPNIAIKDTIDIAGYATTAASRALA-DTPPAQRHAQVVERLLAAGWHIVGKTNMHELAFG 72
Query: 135 ITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILG 194
+TG N + GTP NPQ + IPGGSSSGSA AV +L D ALGTDT G +R PA+ CG++G
Sbjct: 73 MTGINDYTGTPQNPQDATRIPGGSSSGSAAAVGLKLADAALGTDTGGSIRGPAACCGVIG 132
Query: 195 YRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
+P+ G VS +GV P +LD VG AR+
Sbjct: 133 LKPTFGRVSRLGVAPRESTLDCVGPFARD 161
>gi|378768409|ref|YP_005196881.1| glutamyl-tRNA (Gln) amidotransferase subunit A [Pantoea ananatis
LMG 5342]
gi|365187894|emb|CCF10844.1| glutamyl-tRNA(Gln) amidotransferase subunit A GatA [Pantoea
ananatis LMG 5342]
Length = 465
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/222 (39%), Positives = 121/222 (54%), Gaps = 24/222 (10%)
Query: 38 RRNPKLNGRVDFGA--FLE----------RFELIPFPQPPPPAARQPLAGLKFAIKDVFD 85
++NP+LN D + L+ R E++P PLAG+ +A+K++FD
Sbjct: 35 KQNPQLNAWTDITSTRMLQEADAIDKQRLRGEMLP-----------PLAGIPYAVKNLFD 83
Query: 86 VKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTP 145
V+GY T G+ + R A R A + L + GA G +D +A+G T EN HYG
Sbjct: 84 VQGYSTLAGA-ELFRQRPAANRDAFAIAQLQQAGALLSGMVNMDAYAYGFTTENSHYGAT 142
Query: 146 VNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMI 205
NP + I GGSS GSA AVAA LV F+LGTDT G +RVPAS CGI G +P+ G +S
Sbjct: 143 RNPHDLARIAGGSSGGSAAAVAAGLVPFSLGTDTNGSIRVPASLCGIFGLKPTFGRLSRS 202
Query: 206 GVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
G P SLD +G AR L +V +L ++++ +A R
Sbjct: 203 GSHPFVASLDHIGPFARRVDDLAQVYDLLQGKDSMDAFQADR 244
>gi|265996686|ref|ZP_06109243.1| amidase [Brucella ceti M490/95/1]
gi|262550983|gb|EEZ07144.1| amidase [Brucella ceti M490/95/1]
Length = 318
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 157/334 (47%), Gaps = 35/334 (10%)
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
AF + G+N HY P+NP P + GGSSSGSA AVA +L D ALG+DT G +R PASFC
Sbjct: 1 MAFSMMGQNSHYPYPINPAAPDRVTGGSSSGSAAAVAGKLADIALGSDTGGSIRTPASFC 60
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIF 250
G++G R +HG + + G++P + SLDT+G AR+ ++ +VG VLL +A E
Sbjct: 61 GLIGLRSTHGRIPLEGIMPLAPSLDTIGWFARDIALYEKVGAVLLGDDAQE--------- 111
Query: 251 ADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPEN 310
F+L+++ + + + Y+ A P L+A S
Sbjct: 112 ----FKLTQLLYMPVLEQLLLGQAETDAYR--------AMFAKVRPHFATLKAASQP--- 156
Query: 311 GTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKV 370
T ++ L +Q E + W+ S +LG + +R T D +K
Sbjct: 157 -TLSIDELYLAFRQIQGAEAWENHGAWISSGNRQLGPGIADRFAYGAEMTADMVKNQRAR 215
Query: 371 RNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSA--EFHDRTLVLSSIGSMSGCCQ 428
R + ++ + +L +PTV P T + + A + ++ L L + +SG Q
Sbjct: 216 RARFAEEFEAIIGESAVLALPTV--PGAAPLTGEPFEALQAYREQALRLLCLSGLSGLPQ 273
Query: 429 VAIPIGK------YNEHPISISFITYHGGDKFLL 456
+ +P+G ++ ISFI G D+ L+
Sbjct: 274 ITLPLGSLRPGGTMHDASFGISFIGPRGSDRTLI 307
>gi|422643892|ref|ZP_16707031.1| allophanate hydrolase [Pseudomonas syringae pv. maculicola str.
ES4326]
gi|330957445|gb|EGH57705.1| allophanate hydrolase [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 601
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 125/409 (30%), Positives = 189/409 (46%), Gaps = 61/409 (14%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
A PL G+ FA+KD FDV G +T P + + A+ A VV LL +GA IGKT L
Sbjct: 69 AHLPLFGVPFAVKDNFDVAGMLTTAACPAFA---YVADEHAHVVQRLLDSGALLIGKTNL 125
Query: 129 DEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPAS 188
D+FA G+ G YG N P+++ GGSSSGSAVAVA V FALGTDT G RVPA
Sbjct: 126 DQFATGLVGVRSPYGAVRNAHDPAYVSGGSSSGSAVAVARGYVSFALGTDTAGSGRVPAG 185
Query: 189 FCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRL 248
F GI+G +PS G S GVLP ++LD + AR+ ++ HV+ +A++P
Sbjct: 186 FNGIVGLKPSLGLFSNRGVLPACRTLDCPSIFARDVKQAWQIMHVMADYDALDPAS---- 241
Query: 249 IFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSP 308
++ +P + ++ A + E Q A+ V +L+ L++
Sbjct: 242 ------VAVAALPVRRRARRVAVA-------KRCEFFGDEQAQAAYVKALEALQSDP--- 285
Query: 309 ENGTATLKALSSVMLSLQRYEFKTIYE-EWVKSAKPRLG----------YNVFERVLEAI 357
L L+S+ + +Y+ WV + +G + V ++++
Sbjct: 286 ------LVTLTSIDFQVFAEAAALLYQGPWVAERRAAIGRFFDTNAGDIHPVVRGIVQSA 339
Query: 358 NTTQ--DNIKILYKVRNEMRAALQRLLKDDKILVIPT---------VSDPPLKLNTKKTY 406
+ D Y++ RAA Q+LL D +LV+PT V P++LN++ Y
Sbjct: 340 ASFDAVDTFNARYRLAELTRAA-QQLLADVDVLVVPTAPCMPTIDAVLKNPIELNSQLGY 398
Query: 407 SAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFL 455
F + M+ C I + + P I+ I G D+ L
Sbjct: 399 YTNF---------VNLMNLCAIAIPAIARADGLPAGITLIGPAGADQRL 438
>gi|229579162|ref|YP_002837560.1| amidase [Sulfolobus islandicus Y.G.57.14]
gi|229582083|ref|YP_002840482.1| amidase [Sulfolobus islandicus Y.N.15.51]
gi|228009876|gb|ACP45638.1| Amidase [Sulfolobus islandicus Y.G.57.14]
gi|228012799|gb|ACP48560.1| Amidase [Sulfolobus islandicus Y.N.15.51]
Length = 397
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 185/389 (47%), Gaps = 42/389 (10%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L + F IKDV KG T GS +++ ++ A VV +L+ G IGKT EFA
Sbjct: 27 LKDVTFGIKDVILTKGIRTTAGSRIL--ENYVPQKNAYVVDAILREGGKIIGKTNTHEFA 84
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G T + G NP P I GGSS GSAVAV ++D +GTDT G VR+P+S CG+
Sbjct: 85 LGATNTSSIGGPARNPVNPERISGGSSGGSAVAVKLDMIDVGIGTDTGGSVRIPSSLCGV 144
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLAR-NASILHRVGHVLL--QLNAVEPRRAR--- 246
+G++P+ G + GV+P S SLDTVG++ + N +L RV +L + VE + R
Sbjct: 145 IGFKPTTGLIPTDGVIPFSWSLDTVGIIVKDNIGLLRRVFDAILPNEKKKVEIAKLRTRP 204
Query: 247 RL-IFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQS 305
RL +F D ++S++ LK I+ LS Y + + ++P L+
Sbjct: 205 RLGLFLFDEMEVSRI-LLKEIYA------KLSSYFD--------IVEVDLPLLR------ 243
Query: 306 TSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIK 365
+ G+ T + +S E + +++W+ + + + +L+ + + +
Sbjct: 244 ---QYGSKTRRTISLA-------EASSYHKDWITENSNKYFKDTYTLLLDGMKISATDYI 293
Query: 366 ILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSG 425
+ R + ++ K+ ++ PT K++ + +F + + + + ++ G
Sbjct: 294 DAIRYRRVLIEEYIKVFKNIDFILSPTTKIVAPKISDVLSNPLQFREYLIANTELFNVVG 353
Query: 426 CCQVAIPIGKYNEHPIS--ISFITYHGGD 452
++IP NE P+ IS Y GD
Sbjct: 354 APSISIPFSTLNELPVGLMISGELYKDGD 382
>gi|334144949|ref|YP_004538158.1| amidase [Novosphingobium sp. PP1Y]
gi|333936832|emb|CCA90191.1| amidase [Novosphingobium sp. PP1Y]
Length = 587
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/284 (34%), Positives = 146/284 (51%), Gaps = 26/284 (9%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ FA KD DV G T P + + ER+A V+ L + GA CIGKT LD+F
Sbjct: 70 PLAGVPFAAKDNIDVAGLETTAACPAFA---YSPERSATVIERLTQAGAICIGKTNLDQF 126
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G+ G YG P N +++ GGSSSGS+VAVAA LV FALGTDT G RVPA+F
Sbjct: 127 ATGLNGTRSPYGAPRNAYNLAYVSGGSSSGSSVAVAAGLVPFALGTDTAGSGRVPAAFQH 186
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVE---------- 241
++GY+PS G S G++P ++LD + + N + V V+ +A +
Sbjct: 187 LIGYKPSKGRWSNKGLVPACRTLDCITVFTDNVTDARLVDGVIAGFDAADPYSKALANRP 246
Query: 242 --------PRRARRLIFADDIFQLSKVPKLKTIHVISKAIE-SLSGYQNPEHMNV-GQYI 291
PRR +R+ F D + L ++ +++ +E ++ +Q + G ++
Sbjct: 247 LEYKRIGVPRRGQRVWFGDSESEYFYDRALDSLAQMAEIVEIDMAPFQEAAQLLYGGPWV 306
Query: 292 ASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYE-FKTIY 334
A ++ + A SPE T++ + LS+ E F IY
Sbjct: 307 AERTAAIATVLAD--SPEAIDPTVREVVEPGLSMSAVELFNGIY 348
>gi|398878708|ref|ZP_10633819.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM67]
gi|398198891|gb|EJM85842.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM67]
Length = 382
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 175/359 (48%), Gaps = 35/359 (9%)
Query: 75 GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFG 134
G + AIKD D+ G+ T GS + D A R A VV +L G +GKT + E AFG
Sbjct: 14 GKRVAIKDSIDIAGHPTRSGSRAFA-DAEPALRNADVVDAILDAGWQIVGKTNMHELAFG 72
Query: 135 ITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILG 194
+TG N GTP+NPQ P +PGGSSSGSA AVAA L D A+GTDT G VRVPA+ CGI G
Sbjct: 73 VTGINDWTGTPINPQAPDRVPGGSSSGSAAAVAAGLADIAIGTDTGGSVRVPAACCGIAG 132
Query: 195 YRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDI 254
+P++G VS +G P + SLD VG A + + L + + + P
Sbjct: 133 LKPTYGRVSRVGAHPLASSLDCVGPFAADMADL------IAAMQVICPG----------- 175
Query: 255 FQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTAT 314
FQ+ +P ++ L +P H+ A++ + R+Q +
Sbjct: 176 FQVQGLPSGNA------SVGFLEVDCDP-HLQASLGAAADSAGWR--RSQLH-----LSD 221
Query: 315 LKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNEM 374
+A + L++ +E + + K +G +V +R+L A T+ ++ KVR
Sbjct: 222 FEAAFAAGLTVINFENWAAFGHL--TGKGLIGADVEQRLLAASRTSAADLAQAEKVRARF 279
Query: 375 RAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPI 433
+ L++ +L++PT+ P L ++ S T ++ ++SG + +P+
Sbjct: 280 SQQVDAALEEFAVLLLPTMPSLPPTLIEARSASKAVAGMTPLVRPF-NLSGHPALTVPV 337
>gi|347817708|ref|ZP_08871142.1| biuret hydrolase [Verminephrobacter aporrectodeae subsp.
tuberculatae At4]
Length = 467
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 100/171 (58%), Gaps = 1/171 (0%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAGL +A+KD+FDV G VT GS R H A + A +VT + GA +G+ +DE+
Sbjct: 72 PLAGLPYAVKDLFDVAGEVTHAGS-KLNRQHRPAAQDAFLVTRMQAGGAVLLGRLNMDEY 130
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+G T EN HYG NP + GGSS G AVAA V ALG+DT G +RVPASFCG
Sbjct: 131 AYGFTTENTHYGATRNPHDLTRSAGGSSGGCGAAVAAGQVGMALGSDTNGSIRVPASFCG 190
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
I G +P+ G +S G P S+D +G +A + L VL + ++P
Sbjct: 191 IWGLKPTFGRLSRRGSYPFVHSIDHLGPMADSVESLALAYDVLQAPDPLDP 241
>gi|320449233|ref|YP_004201329.1| amidase [Thermus scotoductus SA-01]
gi|320149402|gb|ADW20780.1| amidase/amidotransferase [Thermus scotoductus SA-01]
Length = 431
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 175/395 (44%), Gaps = 41/395 (10%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R PL G+ +KD+F VKG T G+ + A V L + GA KT +
Sbjct: 59 RGPLHGIPLTVKDLFPVKGMPTRAGT---RAPLPPLPEEAQAVRRLREAGALIFAKTNMH 115
Query: 130 EFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
E A GITGEN G N S GGSSSGSAVAVA + +LG+DT G +R+PA+F
Sbjct: 116 EVALGITGENPWTGPVRNALDASRQAGGSSSGSAVAVALGIGLASLGSDTGGSIRIPAAF 175
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
G++G++PS+G VS+ G LP S+S D G +A+ R H L + I
Sbjct: 176 NGVVGFKPSYGRVSLEGALPLSRSTDHAGPIAKTV----RDAHFLTE------------I 219
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
A + L P+ T V ++ L G E Q + +PSL+ + + P
Sbjct: 220 LAGESIPLEG-PQNPTFGV---PLDFLEGRLGVEVRRAFQRLLEELPSLRAEVREVSLP- 274
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
L + V L RYE I+E+ ++ V E ++ ++ T+ + +
Sbjct: 275 -----LPGVYEVYTRLVRYEAARIHEKALREHPEGFSPQVREALMAGLSLTEKDYRDAVA 329
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNT--------KKTYSAEFHDRTLVLSSIG 421
R +R L + L+ L++P P L T ++++ F TL
Sbjct: 330 ERETLRLQLVKALRGVDALLLPAQPLPAPPLGTEEVELESGRRSHREAFITLTLPF---- 385
Query: 422 SMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
S+ G + +P + E P+ + + + D +L
Sbjct: 386 SLLGVPTLTLPFARVEEMPVGLQVVGPYAEDGRVL 420
>gi|238061285|ref|ZP_04605994.1| allophanate hydrolase [Micromonospora sp. ATCC 39149]
gi|237883096|gb|EEP71924.1| allophanate hydrolase [Micromonospora sp. ATCC 39149]
Length = 602
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 165/349 (47%), Gaps = 65/349 (18%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ FA+KD DV G VT G PD+ +EA A VV LL GA +GKT LD+F
Sbjct: 68 PLYGVPFAVKDNIDVAGMVTTAGCPDFG---YEANADAPVVRRLLDAGALLVGKTNLDQF 124
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G+TG YG+ + I GGSSSGSAVAVA V FALGTDT G RVPA+ G
Sbjct: 125 ATGLTGTRSPYGSCESVFGGGLISGGSSSGSAVAVATGQVTFALGTDTAGSGRVPAALNG 184
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPR-------- 243
I+G +P+ G +S GV+P +SLD V + A + + V H + A +P
Sbjct: 185 IVGVKPTRGLLSTAGVVPACRSLDCVSVFAADVAGAMDVLHAARGVTAADPWGRPLPAER 244
Query: 244 --------------RARRLIFADDIFQLSK----VPKLKTIHVISKAIESLSGYQNPEHM 285
RA L F D Q + V +L+ + ++ + + ++ + +
Sbjct: 245 VPARMPGTLRLGAPRAEDLEFFGDAGQRDRFTAGVGRLRDLVAYAQPVPLGTFFEAGDLL 304
Query: 286 NVGQYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRL 345
G ++A + L G + PE A L +V+ + +RY
Sbjct: 305 YQGPWVAERLTGLDGFLRE--RPE---AVLAVTRTVLETGRRY----------------- 342
Query: 346 GYNVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVS 394
+AI D + +++R E+RA + ++ ++ +LV+PTV
Sbjct: 343 ---------DAI----DAFRGRHRLR-ELRARVDQVWQEVDVLVVPTVG 377
>gi|384205127|ref|YP_005590866.1| putative amidase [Bordetella pertussis CS]
gi|332383241|gb|AEE68088.1| putative amidase [Bordetella pertussis CS]
Length = 461
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/168 (44%), Positives = 93/168 (55%), Gaps = 4/168 (2%)
Query: 66 PPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAE-RTAVVVTLLLKNGATCIG 124
PP A PLAG+ A KD+F + G V G+ + +A R A V+ L G+ +
Sbjct: 53 PPPASLPLAGVGLAHKDIFVLPGRVPECGA---RHPWPDAPVRAATVIRRLAAAGSRPLA 109
Query: 125 KTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVR 184
+ E A G TGEN Y P NP GGSSSGSAVAVAA L +LGTDT G VR
Sbjct: 110 ALAMAEHASGATGENPRYPLPRNPLDADAAVGGSSSGSAVAVAAGLCYGSLGTDTAGSVR 169
Query: 185 VPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGH 232
+PA+ CG++G P+ G + GV P + LDTVGLLAR A V H
Sbjct: 170 IPAATCGVVGLMPTRGLLPGDGVAPLAGELDTVGLLARCADDAQAVLH 217
>gi|119491326|ref|ZP_01623380.1| amidase [Lyngbya sp. PCC 8106]
gi|119453490|gb|EAW34652.1| amidase [Lyngbya sp. PCC 8106]
Length = 464
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/176 (43%), Positives = 106/176 (60%), Gaps = 1/176 (0%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ FA+K++FD+ G T GS R++ A + A + L + GA +G +DE+
Sbjct: 72 PLTGVPFAVKNLFDIAGITTLAGS-KINRENPPATQDATAIQRLKQAGAILVGALNMDEY 130
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+G EN HYG NP S I GGSS GSA AVAA LV F LGTDT G +RVPAS CG
Sbjct: 131 AYGFVTENHHYGATPNPHDLSLISGGSSGGSAAAVAANLVPFTLGTDTNGSIRVPASLCG 190
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
+ G++P++G +S GV+ S SLD +G LAR+ + V +L + +P +R
Sbjct: 191 VFGFKPTYGRLSRGGVILFSSSLDHIGPLARSLRDIATVYDILQGEDKHDPVCTKR 246
>gi|428317767|ref|YP_007115649.1| amidohydrolase, AtzE family [Oscillatoria nigro-viridis PCC 7112]
gi|428241447|gb|AFZ07233.1| amidohydrolase, AtzE family [Oscillatoria nigro-viridis PCC 7112]
Length = 487
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 133/265 (50%), Gaps = 26/265 (9%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ FA+K++FD+ G T GS D+ A R A VV L + GA +G +DE+
Sbjct: 77 PLAGVPFAVKNLFDIGGITTLAGS-KINADNPPATRDAAVVARLKQAGAVLVGTLNMDEY 135
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+G EN HYG NP+ + I GGSS GSA AVAA V F LG+DT G +RVPA+ CG
Sbjct: 136 AYGFVTENSHYGPTRNPRDTARIAGGSSGGSAAAVAAGFVPFTLGSDTNGSIRVPAALCG 195
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRAR----- 246
+ G++P++G +S G S SLD VG R+ + + +L ++ +P R
Sbjct: 196 VFGFKPTYGRLSRAGAYLFSGSLDCVGPFGRSIRDMALLYDILQCPDSRDPVCTRRPPEL 255
Query: 247 ------------RLIFADDIFQLSKVPK-LKTIHVISKAIESLSGYQNPEHMNVGQYIAS 293
R+ AD F P+ L + +++KA+ N + +
Sbjct: 256 CSPQLNQGLEGLRIAVADGYFATGAEPEALDAVEIVAKAL------TNVLDCGIDTEKTT 309
Query: 294 NVPSLKGLRAQSTSPENGTATLKAL 318
N P + GL A T PE+ A A
Sbjct: 310 NPPKIGGL-ATVTIPESDRARAAAF 333
>gi|307728745|ref|YP_003905969.1| amidase [Burkholderia sp. CCGE1003]
gi|307583280|gb|ADN56678.1| Amidase [Burkholderia sp. CCGE1003]
Length = 490
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 91/155 (58%), Gaps = 2/155 (1%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
+ L GL +KD + K T FG+ + A+ A +VT + G +GK L E
Sbjct: 84 KALPGLPIGVKDSYLTKDLPTSFGTAVARGFTPAAD--AKIVTSVKDAGCIVLGKNNLVE 141
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
++G+TG N HYG NP HI GGSS G A +VAA+LV ALG DT+G +RVPA+ C
Sbjct: 142 MSYGLTGLNGHYGQAKNPYNVLHITGGSSCGGAASVAARLVPAALGGDTVGSIRVPAALC 201
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNAS 225
G++G++P+ G S GV P S +LDT G +AR S
Sbjct: 202 GVVGFKPTPGRWSGSGVAPISNALDTTGPIARRVS 236
>gi|398872498|ref|ZP_10627788.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM74]
gi|398202532|gb|EJM89374.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Pseudomonas sp. GM74]
Length = 382
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/149 (51%), Positives = 95/149 (63%), Gaps = 1/149 (0%)
Query: 75 GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFG 134
G + AIKD D+ G+ T GS + D A + A VV +L G +GKT L E AFG
Sbjct: 14 GKRVAIKDSIDIAGHPTRSGSRAFA-DAPAAMKNAEVVDAILDAGWQIVGKTNLHELAFG 72
Query: 135 ITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILG 194
+TG N GTP+NPQ P +PGGSSSGSA AVAA L D A+GTDT G VRVPA+ CGI G
Sbjct: 73 VTGINDWTGTPINPQAPDRVPGGSSSGSASAVAAGLADIAIGTDTGGSVRVPAACCGIAG 132
Query: 195 YRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
+P++G VS +G P SLD VG A++
Sbjct: 133 LKPTYGRVSRVGAHPLESSLDCVGPFAKS 161
>gi|288961290|ref|YP_003451629.1| amidase [Azospirillum sp. B510]
gi|288913598|dbj|BAI75085.1| amidase [Azospirillum sp. B510]
Length = 393
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 174/385 (45%), Gaps = 35/385 (9%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
P A AIKD D+ G T GS A VV LL +G +GKT + E
Sbjct: 29 PTALPTVAIKDTIDIAGTPTRAGSRSLADAAPAAGHAEVVGN-LLASGWRIVGKTTMHEL 87
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
AFG TG N+ GT NP+ P+ +PGGSSSGSA AVAA L D A+GTDT G VR+PA+ CG
Sbjct: 88 AFGTTGINRWAGTAPNPRFPAFVPGGSSSGSAAAVAAGLADAAIGTDTGGSVRIPAACCG 147
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
+ G +P+ G VS GV+P SLD VG A + L + A++P
Sbjct: 148 VFGLKPTFGRVSRHGVMPAETSLDCVGPFAADMDRLSAC------MAAIDP--------- 192
Query: 252 DDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHM-NVGQYIASNVPSLKGLRAQSTSPEN 310
+P + + + G +PE +V IA+ V + G P
Sbjct: 193 ----TFGPLPAIDGVTI---------GLLDPESAGDVDGGIAAAVRAAVGSSDLPVEPV- 238
Query: 311 GTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKV 370
A ++A LS+ E V++ +G +V R+ A TT +++ V
Sbjct: 239 ALAGMRAAFEAGLSVINVETWAACAALVETGL--VGEDVAVRLRNAARTTAEDLARAEAV 296
Query: 371 RNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVA 430
R A + LL ++ +PT++ PP + S TLV ++SG +A
Sbjct: 297 RAAFTAEVDALLARVAVIALPTMAGPPPLVADAGDTSRLVRMTTLVRPF--NLSGHPAIA 354
Query: 431 IPIGKYNEHPISISFITYHGGDKFL 455
IP+ + P S+ + G D+ L
Sbjct: 355 IPLAAVDGAPASLQLVAAKGADELL 379
>gi|83718103|ref|YP_438521.1| pyrazinamidase/nicotinamidase [Burkholderia thailandensis E264]
gi|257141575|ref|ZP_05589837.1| pyrazinamidase/nicotinamidase [Burkholderia thailandensis E264]
gi|83651928|gb|ABC35992.1| pyrazinamidase/nicotinamidase [Burkholderia thailandensis E264]
Length = 375
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/153 (49%), Positives = 93/153 (60%), Gaps = 1/153 (0%)
Query: 75 GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFG 134
G AIKD D+ G T G+ D AER A VV +L G +GK + E AFG
Sbjct: 14 GPTIAIKDTIDIAGRRT-TGASRALADAPPAERHAEVVQRVLDAGWRIVGKANMHELAFG 72
Query: 135 ITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILG 194
+TG N + GTPVNPQ P+ IPGGSSSGSA V LVD ALGTDT G +R PA+ CG++G
Sbjct: 73 MTGINDYTGTPVNPQDPTRIPGGSSSGSASLVGLGLVDAALGTDTGGSIRGPAACCGVIG 132
Query: 195 YRPSHGTVSMIGVLPNSQSLDTVGLLARNASIL 227
+P+ G VS GV P +LD VG AR+ + L
Sbjct: 133 LKPTFGRVSRRGVAPADSTLDCVGPFARDITTL 165
>gi|377808146|ref|YP_004979338.1| putative amidase [Burkholderia sp. YI23]
gi|357939343|gb|AET92900.1| putative amidase [Burkholderia sp. YI23]
Length = 502
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 97/163 (59%), Gaps = 1/163 (0%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGS-PDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
A +PL+G KDVFDV G G G+ PD A TA V+ L GA G
Sbjct: 66 ALRPLSGAFLLHKDVFDVDGRRPGCGALPDAHVAGDTASVTAPVLRALAAAGAAYGGALT 125
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
L ++A G T EN + PVNP + + GGSSSGSAVAVA L +LGTDT G VR+PA
Sbjct: 126 LAQYACGATAENPAHACPVNPLDAAAMVGGSSSGSAVAVAGDLCYASLGTDTAGSVRIPA 185
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRV 230
+ CG++G + + G + GV+P + SLD+VG+LARNA+ RV
Sbjct: 186 ASCGLVGLKTTAGALPAAGVMPLAASLDSVGVLARNAADARRV 228
>gi|239813284|ref|YP_002942194.1| allophanate hydrolase [Variovorax paradoxus S110]
gi|239799861|gb|ACS16928.1| allophanate hydrolase [Variovorax paradoxus S110]
Length = 569
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 99/166 (59%), Gaps = 3/166 (1%)
Query: 61 FPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGA 120
FP+P P A PLAGL+FA+KD DV G T P + D AE +AVV LL GA
Sbjct: 18 FPRPVPGADAGPLAGLRFAVKDNIDVAGVPTTAACPAF--DRRPAEHSAVVRKLL-DAGA 74
Query: 121 TCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTI 180
+ +GKT LD+FA G+ G YG N ++ GGSSSGSA VAA DFALGTDT
Sbjct: 75 SLLGKTNLDQFACGLNGTRSPYGEVPNAFDARYVSGGSSSGSAYVVAAGEADFALGTDTA 134
Query: 181 GCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASI 226
G RVPA I+G +PS G +S GV+P +QS D V + AR+ +
Sbjct: 135 GSGRVPAGLNNIVGLKPSRGLLSAFGVVPAAQSADCVSIFARSVGL 180
>gi|410642993|ref|ZP_11353499.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Glaciecola chathamensis S18K6]
gi|410137421|dbj|GAC11686.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Glaciecola chathamensis S18K6]
Length = 448
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 199/449 (44%), Gaps = 83/449 (18%)
Query: 37 RRRNPKLNGRVDFGAFLERFELIPFPQPPPPAAR--QPLAGLKFAIKDVFDVKGYVTGFG 94
+R NPK+N AFL+ P+ P R G+ +KD DVKG+ T G
Sbjct: 36 KRVNPKIN------AFLQ----TALPKCAPQETRTGSVFQGICIGVKDNIDVKGFATTAG 85
Query: 95 SPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHI 154
R +A++ A V+ L + GA IGK + E A G T +N+H+G NP +
Sbjct: 86 MA--TRIGRQAKQDAFVINRLRQTGAQFIGKLNMHEGALGATNQNEHFGDCHNPHKHGYT 143
Query: 155 PGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSL 214
PGGSS GSA AVA+ +V +LGTDT+G VR+PA++CGI G++PS G VS G + S+ +
Sbjct: 144 PGGSSGGSAAAVASGMVGLSLGTDTMGSVRIPAAYCGIFGFKPSRGAVSNHGSVTCSRVM 203
Query: 215 DTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIE 274
D +G +AR+A L V + A + A + F KAI+
Sbjct: 204 DNIGPMARSAKDLTLAISV---MKAFDESCAASIDF--------------------KAID 240
Query: 275 SLSGYQNPEHMNVGQYIASNVP-SLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTI 333
+ N + VP +L+GL S + +A L A + + +LQ ++F
Sbjct: 241 CFTASDNKVLL---------VPENLEGLGVSSDIAADFSANLSAFTDLGYTLQYFDF--- 288
Query: 334 YEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNEMRAAL--------------Q 379
++ +A R G + E + + +D + K MR L +
Sbjct: 289 -SDYDFAAARRAGLLLCEADMR-VEHQEDWLNQPQKFSEYMRGMLSYIERKTPMDMMQSE 346
Query: 380 RLLKDDKI-----------LVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQ 428
R+L + KI +++PTV L +++ L+S + +G
Sbjct: 347 RVLDNAKIFARQLFKQGCAILMPTV------LQRAFSFAQPVPANQADLTSFANQAGLPA 400
Query: 429 VAIPIGKYNEHPISISFITYHGGDKFLLD 457
V++P+ N P + + G D LLD
Sbjct: 401 VSLPMLSDNILPAGMQIVGPLGSDNQLLD 429
>gi|296109416|ref|YP_003616365.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [methanocaldococcus
infernus ME]
gi|295434230|gb|ADG13401.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanocaldococcus
infernus ME]
Length = 433
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 182/408 (44%), Gaps = 35/408 (8%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
A ++PL G A+K +V+GY S +++ A A V+ LL GA IG T
Sbjct: 43 AKKKPLYGKIVAVKANINVEGYTISCASKTL--ENYVAPYNATVIEKLLDAGALIIGITN 100
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
+DEFA G +GE +YG NP IPGGSSSGSA AV+A+L D ALG+DT G +R P+
Sbjct: 101 MDEFACGSSGETSYYGPTKNPVAKDRIPGGSSSGSAAAVSAELCDIALGSDTGGSIRNPS 160
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
S CG+ G++PS+G VS G+ + S D +G +A+ A L LL +N ++ + R
Sbjct: 161 SHCGVSGFKPSYGVVSRHGLCDLAMSFDQIGPIAKRAEDL------LLVMNIIKGKDVRD 214
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTS 307
+ P+ K + V + + + + + I + K + +
Sbjct: 215 TTTVE-------TPEFKKLDVSKFKVGVVEEFMEAADEKIRKEIEKGIEVFKDMGCEIVH 267
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVF----ERVLEAINT---- 359
K L + + + + + R GY + E VL I
Sbjct: 268 -----LNYKYLDLALPTYYLINYVEFFSATRRYDGRRYGYRIEEVCGEEVLRRITIGSMI 322
Query: 360 -----TQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRT 414
+ K K RN +R + +L+KD I+V PTV P KL K + ++
Sbjct: 323 SQKEYSGKYYKKALKARNLLRKEMIKLMKDIDIIVSPTVPKLPHKLGEKLSPMDMYNYD- 381
Query: 415 LVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDL 462
VL+ + ++ G +P N PI + + D+ +L +++
Sbjct: 382 -VLTVLANICGVPAGTVPCSAINGIPIGLQIMAKPFEDEKVLSAMIEF 428
>gi|347761916|ref|YP_004869477.1| amidase [Gluconacetobacter xylinus NBRC 3288]
gi|347580886|dbj|BAK85107.1| amidase [Gluconacetobacter xylinus NBRC 3288]
Length = 456
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 122/406 (30%), Positives = 187/406 (46%), Gaps = 57/406 (14%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ F +KD+FDV G VT GS RD+ A + A VV L GA + +DEF
Sbjct: 73 PLAGVPFGVKDLFDVCGEVTTAGS-IVLRDNLPATQDATVVARLRAAGAVPVATLNMDEF 131
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+G + EN H GT NP P+ + GGSS GSA +VAA ++ F LG+DT G +RVP++ CG
Sbjct: 132 AYGFSTENAHTGTTRNPHDPTRLVGGSSGGSAASVAAGMLPFTLGSDTNGSIRVPSALCG 191
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL----LQLNAVEPRRARR 247
+ G +P++G + + GV P SLD VG +A L V ++ L L AV R R
Sbjct: 192 VWGIKPTYGQMPLQGVYPFVASLDVVGPMAVTVQDLQAVYTIMAGRSLTLPAVGDVRVAR 251
Query: 248 L--IFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQS 305
L FA +I ++ L G H+ G+ I +P + RA +
Sbjct: 252 LGGWFAHNIS--------------AEMAAGLDGVM--AHLGSGRVI--ELPEVARARASA 293
Query: 306 ---TSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQD 362
++ E G L L R +++ ++ + + RL + +L A Q
Sbjct: 294 FLISAAEGGN----------LHLPRLRLRSM--QYDPATRSRL---MAGAILPAATFVQA 338
Query: 363 NIKILYKVRNEMRAALQRLLKDDKILVIPTVS------DPPLKLNTKKTYSAEFHDRTLV 416
+ R RA + L +L+ PT D P + K+ SA + +
Sbjct: 339 Q-----RFRRWFRAQVHEALAQADVLIAPTTVGIAPRIDQPTIMLDGKSVSARAN--LGI 391
Query: 417 LSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDL 462
+ S++G +A+P+ + P+ I + GG+ L +L
Sbjct: 392 FTQPISLTGLPVLAVPL-AVDGMPLGIQLVGAPGGEDRLFAVAAEL 436
>gi|378578474|ref|ZP_09827149.1| amidase [Pantoea stewartii subsp. stewartii DC283]
gi|377818754|gb|EHU01835.1| amidase [Pantoea stewartii subsp. stewartii DC283]
Length = 466
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/243 (38%), Positives = 126/243 (51%), Gaps = 31/243 (12%)
Query: 34 TLRRRRNPKLNGRVDFGAFLE------------RFELIPFPQPPPPAARQPLAGLKFAIK 81
T+ ++NP+LN D A R E +P PLAG+ +A+K
Sbjct: 31 TVIEKQNPQLNAWTDITATRMVQEADAIDKQRLRGETLP-----------PLAGIPYAVK 79
Query: 82 DVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKH 141
++FDV+GY T G+ + R A R A +T L + GA G +D +A+G T EN H
Sbjct: 80 NLFDVQGYTTLAGARLF-RQRPTATRDAFAITQLQQAGALLSGMVNMDAYAYGFTTENTH 138
Query: 142 YGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGT 201
YG NP + I GGSS GSA AVAA LV F+LGTDT G +RVPAS CGI G +P+ G
Sbjct: 139 YGATHNPHDLARIAGGSSGGSAAAVAAGLVPFSLGTDTNGSIRVPASLCGIFGLKPTFGR 198
Query: 202 VSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVP 261
+S G P SLD +G AR L V +L ++ + +A R + A +P
Sbjct: 199 LSRSGSHPFVASLDHIGPFARRVDDLALVYDLLQGHDSTDAFQADRPLAA-------TLP 251
Query: 262 KLK 264
+LK
Sbjct: 252 QLK 254
>gi|83746058|ref|ZP_00943113.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Ralstonia
solanacearum UW551]
gi|207742446|ref|YP_002258838.1| amidase protein [Ralstonia solanacearum IPO1609]
gi|83727241|gb|EAP74364.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Ralstonia
solanacearum UW551]
gi|206593836|emb|CAQ60763.1| amidase protein [Ralstonia solanacearum IPO1609]
Length = 448
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 124/396 (31%), Positives = 171/396 (43%), Gaps = 43/396 (10%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHE--AERTAVVVTLLLKNGATCIGKTVLDE 130
LAGL +IKD+FDV G V+ GS + H+ A AV V L GA +G+T + E
Sbjct: 73 LAGLPVSIKDLFDVAGQVSAAGS---RALAHQPPAAADAVAVARLRAAGAVLLGRTNMSE 129
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FAF G N HYGTP P + GGS+SG AV VA + ALGTDT G +R+PA+FC
Sbjct: 130 FAFSGLGLNPHYGTPRTPADGTRAAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPAAFC 189
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL----LQLNAVEPRRAR 246
+ G++P+ V M G +P S SLD+ G LA + V VL L +AV P
Sbjct: 190 ALTGFKPTARRVPMAGGVPLSTSLDSGGPLANSVDCCAIVDAVLSGQALDTDAV-PLAGL 248
Query: 247 RLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIAS-NVPSLKGLRAQS 305
RL D + T +A+ L G I + P L L
Sbjct: 249 RLGLTRDYVGADLDDTVAT--AFERAVMRLE--------QAGARIVRFDFPELLQL---- 294
Query: 306 TSPE-NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNI 364
PE NG L A E + + A+ + V R+ T
Sbjct: 295 --PEINGGGGLPA----------AESWAWHRPHLARAEAQYDRRVAARIRRGEQMTAAAY 342
Query: 365 KILYKVRNEMRAALQRLLKDDKILVIPTVSD-PPLKLNTKKTYSAEFHDRTLVL---SSI 420
+ R M AA ++ L + ++PTV+ PP + + F LVL S I
Sbjct: 343 LDVMAARERMIAAARKRLGNLDAWLMPTVAIVPPEVAPLEADDTQFFRTNALVLRNPSVI 402
Query: 421 GSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+ GC + +PI +E P+ +S D +L
Sbjct: 403 NFLDGCA-LTLPIHAADELPVGLSLCGLADDDARIL 437
>gi|218295986|ref|ZP_03496766.1| Amidase [Thermus aquaticus Y51MC23]
gi|218243724|gb|EED10252.1| Amidase [Thermus aquaticus Y51MC23]
Length = 434
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 175/395 (44%), Gaps = 41/395 (10%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R PL GL +KD+F VKG T G+ + A+ V L + GA KT +
Sbjct: 62 RGPLHGLPLTVKDLFPVKGMPTRAGT---RAPLPPLPEEALAVGRLKEAGALIFAKTNMH 118
Query: 130 EFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
E A GITGEN G N P+ GGSS GSAVAVA + +LG+DT G +R+PA+F
Sbjct: 119 EVALGITGENPWTGPVRNAVDPTRQAGGSSGGSAVAVALGIGLASLGSDTGGSIRIPAAF 178
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
G++G++PS+G VS+ G LP S+S D G LA+ R H L + I
Sbjct: 179 NGVVGFKPSYGRVSLEGALPLSRSTDHGGPLAKTV----RDAHFLTE------------I 222
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
A + L P+ T V +E G + V + + L GLRA + +
Sbjct: 223 LAGESIPLEG-PQNPTFGVPLDFLEGRLG------VGVRKAFTRLLEDLPGLRA---TVK 272
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYK 369
+ LK V L RYE I+E+ +K V E +L + ++ + +
Sbjct: 273 EVSLPLKGAYEVYTRLVRYEAARIHEKALKEHPEGFSPQVREALLAGLALSEKDYRDAVA 332
Query: 370 VRNEMRAALQRLLKDDKILVIPTVSDPPLKLNT--------KKTYSAEFHDRTLVLSSIG 421
R +R L + L+ L++P P L T +K++ F TL
Sbjct: 333 EREVLRLKLVKALRGVDALLLPAQPLPAPPLGTEEVELESGRKSHREAFITLTLPF---- 388
Query: 422 SMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
S+ G +A+P K P+ + + + D +L
Sbjct: 389 SLLGVPALALPFAKVEGMPVGLQVVGPYAEDGRVL 423
>gi|429218126|ref|YP_007179770.1| amidase [Deinococcus peraridilitoris DSM 19664]
gi|429128989|gb|AFZ66004.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Deinococcus peraridilitoris DSM 19664]
Length = 386
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 118/394 (29%), Positives = 177/394 (44%), Gaps = 44/394 (11%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
A PL+GL F+ KD++ + G+ G+ + E+ ++V LL+ GA IG T L
Sbjct: 21 APGPLSGLTFSAKDLYGIPGWPLRAGTQAPLPNVGES----LLVRQLLERGADLIGSTQL 76
Query: 129 DEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPAS 188
E A GI G N GT NP P+ I GGSS G+A +VA VDFALGTDT G +RVPAS
Sbjct: 77 HEVALGIIGFNAFGGT-RNPLDPARIAGGSSGGAAASVALGEVDFALGTDTGGSIRVPAS 135
Query: 189 FCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRL 248
FCG++G++P+ G S GVLP SQ+ D G LAR ++ RV H AV + A
Sbjct: 136 FCGVVGFKPTFGLYSTEGVLPLSQTCDHAGPLARTVGVIARV-H-----EAVTGQAASTA 189
Query: 249 IFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSP 308
+ L VP T ++ + G+ + LR Q S
Sbjct: 190 SWQGQRVGLWNVPHWTTPTTWAQVV----GFA------------------ERLRTQGASV 227
Query: 309 E--NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKI 366
E L + ++L+ E ++ + + +P E + T D ++
Sbjct: 228 ELFEFPDVLDVYTPIVLA----EGARVHADALAGDEPGFAPRTLELLRRGQTLTHDEVRA 283
Query: 367 LYKVRNEMRAALQRLLKDDKILVIPTVSD-PPLKLNTKKT---YSAEFHDRTLVLSSIGS 422
++ R +R L L + +L+ P V D PL + T + L L++ S
Sbjct: 284 AHQQRASLRGHLDALFQAYDVLLAPAVPDVAPLIDQEQLTLGNLTVPVRQAVLRLTAPWS 343
Query: 423 MSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+ G +A+P + + + I G D LL
Sbjct: 344 LLGTPVLALPQSQ-GQLSTGVQLIMPWGADAALL 376
>gi|386080531|ref|YP_005994056.1| putative amidase GatA [Pantoea ananatis PA13]
gi|354989712|gb|AER33836.1| putative amidase GatA [Pantoea ananatis PA13]
Length = 465
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/222 (39%), Positives = 122/222 (54%), Gaps = 24/222 (10%)
Query: 38 RRNPKLNGRVDFGA--FLE----------RFELIPFPQPPPPAARQPLAGLKFAIKDVFD 85
++NP+LN D + L+ R E++P PLAG+ +A+K++FD
Sbjct: 35 KQNPQLNAWTDITSTRMLQEADAIDKQRLRGEMLP-----------PLAGIPYAVKNLFD 83
Query: 86 VKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTP 145
V+GY T G+ + + A R A +T L + GA G +D +A+G T EN HYG
Sbjct: 84 VQGYSTLAGAELFGQ-RPAANRDAFAITQLQQAGALLSGMVNMDAYAYGFTTENSHYGAT 142
Query: 146 VNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMI 205
NP + I GGSS GSA AVAA LV F+LGTDT G +RVPAS CGI G +P+ G +S
Sbjct: 143 RNPHDLARIAGGSSGGSAAAVAAGLVPFSLGTDTNGSIRVPASLCGIFGLKPTFGRLSRS 202
Query: 206 GVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
G P SLD +G AR L +V +L ++++ +A R
Sbjct: 203 GSHPFVASLDHIGPFARRVDDLAQVYDLLQGKDSMDAFQADR 244
>gi|358012469|ref|ZP_09144279.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Acinetobacter
sp. P8-3-8]
Length = 369
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 113/394 (28%), Positives = 175/394 (44%), Gaps = 58/394 (14%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
+ LK +KD D++G T GS + VV +LL + KT L E A
Sbjct: 12 VGALKVMVKDSIDIQGMKTMSGSKALMQSQPATTNAEVVDRILLAD-CQITAKTNLHELA 70
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
FGITG N +GT +NP+ P+ IPGGSSSGSA AVAA L DF+LGTDT G +R+PA+ CGI
Sbjct: 71 FGITGINHTFGTALNPKYPALIPGGSSSGSAAAVAAGLADFSLGTDTGGSIRMPAACCGI 130
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
G +P+ VS GV P SLD VG A + ++ ++ D
Sbjct: 131 YGLKPTFNRVSRQGVQPAESSLDCVGPFANSVEMIETAMQII-----------------D 173
Query: 253 DIFQ----LSKVPKLKTIHV-----ISKAIESLSGYQN--PEHMNVGQYIASNVPSLKGL 301
FQ L++ PKL + V + I+ ++ P+H++V +
Sbjct: 174 PTFQPIASLTQAPKLAVLDVKADTAVLDCIQKFFAQKSLVPKHVSVDSF----------- 222
Query: 302 RAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQ 361
++ + + YE Y E ++ LG +V R+L+A TT
Sbjct: 223 --------------ESAFQAGMQIINYESWQAYGELTETG--LLGKDVQHRLLKAAETTL 266
Query: 362 DNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIG 421
++ +R + + L + L++PT+ P KL + A + LV
Sbjct: 267 QQVEQAECIRTKFIQEIDHLFTEYDALLLPTLPQIPPKLIDAENTVAFLNLTALVRPF-- 324
Query: 422 SMSGCCQVAIPIGKYNEHPISISFITYHGGDKFL 455
++SG ++IP+ P+ + + D+ L
Sbjct: 325 NLSGHPAISIPLETEEGLPVGLQIVAKQNADEHL 358
>gi|374328250|ref|YP_005086450.1| Glu-tRNA(Gln) amidotransferase subunit A (gatA) [Pyrobaculum sp.
1860]
gi|356643519|gb|AET34198.1| Glu-tRNA(Gln) amidotransferase subunit A (gatA) [Pyrobaculum sp.
1860]
Length = 401
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 177/366 (48%), Gaps = 45/366 (12%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L GL A+KD ++ G G+P KR +++TA VV L+ GA IGKT + E A
Sbjct: 43 LCGLAVAVKDNIEIAGMPITNGAPYMKR---VSDKTAPVVRRLMAEGAVVIGKTNMHELA 99
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G T N H+G NP PS I GGSS GSA AVAA + D +GTDT G VR+PA+ CG+
Sbjct: 100 LGATNLNPHFGPTRNPHDPSRITGGSSGGSAGAVAAGMADLGIGTDTGGSVRIPAALCGV 159
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARN----ASILHRVGHVLLQLNAVEPRRARRL 248
+GY+P +G + GVLP +QSLD +G + + S+L G +L P+R R
Sbjct: 160 VGYKPPYGKIPTEGVLPLAQSLDHIGFITKTVADLVSVLAAAGWGPRELPT--PKRFRFA 217
Query: 249 IFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSP 308
+ V K V A+E++ G ++ ++ G+Y A
Sbjct: 218 VLMGITENTRHVEKAFWRAV--AALEAVGGLRDEVFIDAGRYSA---------------- 259
Query: 309 ENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILY 368
A ++++LS E Y ++++S+ ++G +V VL + + +
Sbjct: 260 --------ARAAILLS----EAAANYYDYLRSSAEQMGRDV--AVLLSAGAALPAVAYVT 305
Query: 369 --KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGC 426
+V+ E + L K ++V PT + +++ ++ S + L + + +++G
Sbjct: 306 AKRVKEEAVRFFETLFKKYDVVVTPTTATEAVEI--EEAASIAVRPKLLAYTELFNLTGH 363
Query: 427 CQVAIP 432
+++P
Sbjct: 364 PAISVP 369
>gi|311103247|ref|YP_003976100.1| amidase [Achromobacter xylosoxidans A8]
gi|310757936|gb|ADP13385.1| amidase family protein 1 [Achromobacter xylosoxidans A8]
Length = 449
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 176/402 (43%), Gaps = 25/402 (6%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
+PLAG+ +K FDV+G+ T GS D A R A +V L + GA + + + E
Sbjct: 59 EPLAGMVLGVKACFDVRGWTTHAGS-QVLADAPAARRDAALVQALRRAGAVLLAQNNMTE 117
Query: 131 FAFGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPAS 188
FA+G G N +GTP++P M + GGSSSG AVAVA +V AL +DT G R+PA+
Sbjct: 118 FAYGALGLNARFGTPLSPLMADVPRVAGGSSSGGAVAVAQGMVSLALASDTSGSARIPAA 177
Query: 189 FCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRL 248
FCG+ G++PS G G++ S + D G++A +A+ V VL +A P +
Sbjct: 178 FCGVAGFKPSRGRYEDAGMMYLSPTFDVPGIIAADAAQCLLVDKVLAPWDAAMPAPGVQ- 236
Query: 249 IFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPE-HMNVGQYIASNVPSLKGLRAQSTS 307
P + V+ +E L PE ++ + + LR +S
Sbjct: 237 ---------GATPLASKVFVVPDHVEDL---LEPEVRRAFAAWLECLMDAGAALRRESM- 283
Query: 308 PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKIL 367
P A A +++ Y ++ + + R V R+L
Sbjct: 284 PCLALAGKVARDGGIIAADAY---ALHASCLAADAARYDPRVGPRMLLGAQVPAHAYIAA 340
Query: 368 YKVRNEMRAALQRLLKDDKILVIPTVS--DPPL-KLNTKKTYSAEFHDRTLVLSSIGSMS 424
+ ++R R + ++ PTV PP+ +L+ +Y E + R L+ +
Sbjct: 341 QRRLADLRREYDRAIAGADAVLTPTVPMLPPPVAQLDDDDSYLRE-NGRAFSLTEFANRL 399
Query: 425 GCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSL 466
++IP + + + + GGD+ LL + D+L
Sbjct: 400 DLPSISIPGHRAAKQAVGLMATGLRGGDRALLLAAAQIEDAL 441
>gi|261419598|ref|YP_003253280.1| amidase [Geobacillus sp. Y412MC61]
gi|319766416|ref|YP_004131917.1| amidase [Geobacillus sp. Y412MC52]
gi|261376055|gb|ACX78798.1| Amidase [Geobacillus sp. Y412MC61]
gi|317111282|gb|ADU93774.1| Amidase [Geobacillus sp. Y412MC52]
Length = 470
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 92/155 (59%), Gaps = 2/155 (1%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R PL G+ AIKD+ V T GS RD +A V+ L + GA GKT L
Sbjct: 70 RGPLHGIPIAIKDILYVANETTTMGS-KIHRDFRPT-YSATVIEKLTEAGAVFPGKTNLH 127
Query: 130 EFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
E+A+G T N H+G NP P IPGGSS GS VA AA + +LGTDT G +R+P+SF
Sbjct: 128 EYAWGATNNNPHFGPARNPWDPERIPGGSSGGSGVATAAHMTIASLGTDTGGSIRIPSSF 187
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
CGI+G +P++G VS G P + SLD +G +A+ A
Sbjct: 188 CGIVGLKPTYGLVSKYGCFPLAWSLDHIGPMAKTA 222
>gi|86606740|ref|YP_475503.1| amidase [Synechococcus sp. JA-3-3Ab]
gi|86555282|gb|ABD00240.1| amidohydrolase, AtzE family [Synechococcus sp. JA-3-3Ab]
Length = 466
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 146/288 (50%), Gaps = 36/288 (12%)
Query: 24 SVVGFVVLAETLRR--RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQ--------PL 73
SV V+A L R RR+P+LN F A LE L Q RQ PL
Sbjct: 24 SVSAQAVVAACLERIRRRDPQLNA---FTAVLEESALQAAEQ----VDRQVAQGIPVGPL 76
Query: 74 AGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAF 133
AG+ FA+K++FDV G T GS R++ A + A VV L + GA +G +DE+A+
Sbjct: 77 AGVPFAVKNLFDVAGLTTLAGS-AINRENPPAIQDATVVARLKQAGAILVGTLNMDEYAY 135
Query: 134 GITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGIL 193
G EN HYG NP + GGSS GSA AVA LV ALG+DT G +RVPAS CG+
Sbjct: 136 GFVTENSHYGPTHNPHDLNRSAGGSSGGSAAAVAGGLVPLALGSDTNGSIRVPASLCGVY 195
Query: 194 GYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRAR------- 246
G +P++G +S GV + S D VG LAR+ + + V+ + +P R
Sbjct: 196 GLKPTYGRLSRAGVALFAPSFDHVGPLARSVADIALSFDVMQGPDPQDPVCTRRPVDPTF 255
Query: 247 ----------RLIFADDIF-QLSKVPKLKTIHVISKAIESLSGYQNPE 283
R+ ADD F + +++P L + +++A+ + + PE
Sbjct: 256 GQLGQGIEGLRIAVADDYFARGAELPILAGVEKVAQALGARQTVRIPE 303
>gi|397664187|ref|YP_006505725.1| Glutamyl-tRNA(Gln) amidotransferase (subunit A) [Legionella
pneumophila subsp. pneumophila]
gi|395127598|emb|CCD05797.1| Glutamyl-tRNA(Gln) amidotransferase (subunit A) [Legionella
pneumophila subsp. pneumophila]
Length = 483
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 182/406 (44%), Gaps = 28/406 (6%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
+PL G+ A+KD+F K T S + +A A +VT +NGA IGKT +DE
Sbjct: 65 KPLTGIPMALKDLFCTKRLNTTCASKMLA--NFQAPYDATIVTKFKQNGAIIIGKTNMDE 122
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FA G + EN ++G+ NP +PGGSS GSA AVA LV FA+G+DT G +R PA+FC
Sbjct: 123 FAMGSSNENSYFGSVKNPWDRERVPGGSSGGSAAAVAGNLVPFAIGSDTGGSIRQPAAFC 182
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI- 249
GI G +P++G VS G++ + SLD G A++A L + H + ++ + R+I
Sbjct: 183 GISGIKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAMILHCMAGFDSKDSTSVDRVIP 242
Query: 250 -FADDIFQ-LSKV----PKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRA 303
++ +I + + K+ P + K I+ N+G I L+ L
Sbjct: 243 DYSAEIKKPIDKIRIGLPSCFFQPQVEKGIQDAIHDAVKLFENLGAEIVEIDLKLQPLWV 302
Query: 304 QS---TSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTT 360
+ ++ L + + T+ E S G V R+L +
Sbjct: 303 PCYYVIACAEASSNLSRYDGIRFGHRSKSASTLIELITNSRSEGFGNEVKRRILTGTHVL 362
Query: 361 QDNIKILY-----KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTK-----KTYSAEF 410
Y KVR +R L L +++ PT KL K + Y A+
Sbjct: 363 SSGFFDAYYLHAQKVRRLIRDELITTLNSVDVILGPTTPTTAFKLGEKIDDPIQNYLAD- 421
Query: 411 HDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
V + +++G ++IP G N+ PI + + H + LL
Sbjct: 422 -----VFTVAANLAGLPAISIPTGFENKLPIGLQLMGKHFSENRLL 462
>gi|329850142|ref|ZP_08264988.1| biuret hydrolase [Asticcacaulis biprosthecum C19]
gi|328842053|gb|EGF91623.1| biuret hydrolase [Asticcacaulis biprosthecum C19]
Length = 410
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 104/178 (58%), Gaps = 5/178 (2%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAG+ FA+KD+FD+ G T G+ + D A+ A V+T L GA IG T +DE+A
Sbjct: 40 LAGVPFAVKDLFDIAGLPTTAGA-RMRLDATPAKADATVITRLKAEGAVLIGTTNMDEYA 98
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+G N H+GT +NP P + GGSS GSA AVAA +V ALG+DT G +RVPAS CG+
Sbjct: 99 YGFATVNAHFGTTLNPHAPDRLAGGSSGGSAAAVAAGVVPLALGSDTNGSIRVPASLCGV 158
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL----LQLNAVEPRRAR 246
G RP+ + + GV P +LDTVG R+ + L V+ L + PR AR
Sbjct: 159 WGMRPAMDDMPLEGVFPFVHALDTVGPFTRSLADLKLAYEVMSCRVLATTSATPRIAR 216
>gi|167614998|ref|ZP_02383633.1| pyrazinamidase/nicotinamidase [Burkholderia thailandensis Bt4]
Length = 262
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/153 (49%), Positives = 93/153 (60%), Gaps = 1/153 (0%)
Query: 75 GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFG 134
G AIKD D+ G T G+ D AER A VV +L G +GK + E AFG
Sbjct: 14 GPTIAIKDTIDIAGRRT-TGASRALADAPPAERHAEVVQRVLDAGWRIVGKANMHELAFG 72
Query: 135 ITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILG 194
+TG N + GTPVNPQ P+ IPGGSSSGSA V LVD ALGTDT G +R PA+ CG++G
Sbjct: 73 MTGINDYTGTPVNPQDPTRIPGGSSSGSASLVGLGLVDAALGTDTGGSIRGPAACCGVIG 132
Query: 195 YRPSHGTVSMIGVLPNSQSLDTVGLLARNASIL 227
+P+ G VS GV P +LD VG AR+ + L
Sbjct: 133 LKPTFGRVSRRGVAPADSTLDCVGPFARDITTL 165
>gi|157363275|ref|YP_001470042.1| amidase [Thermotoga lettingae TMO]
gi|157313879|gb|ABV32978.1| Amidase [Thermotoga lettingae TMO]
Length = 447
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 182/398 (45%), Gaps = 24/398 (6%)
Query: 63 QPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKR-DHHEAERTAVVVTLLLKNGAT 121
Q P PL G+ A+KD+ KG T GS WK HE A +V L K GA
Sbjct: 57 QTADPEKLPPLFGIPIALKDLIFTKGIRTTGGSLFWKDFIPHE---DAFIVKKLRKAGAI 113
Query: 122 CIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIG 181
IGKT + E A G+T N H+G +NP S I GGSS GSAVAVA+ + A+GTDT G
Sbjct: 114 FIGKTNMHEIALGVTNNNPHFGPCLNPHDSSRISGGSSGGSAVAVASGMCLAAIGTDTGG 173
Query: 182 CVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVE 241
+R+P++ CG++G++P++G VS+ G++P + LD G + + V V+ ++ +
Sbjct: 174 SIRIPSALCGVVGFKPTYGRVSLRGIMPLAWHLDHAGPITKCVEDARIVLKVIEGYDSKD 233
Query: 242 PRRARRLIFADDIFQLSKVPKLKTIHV-ISKAIESLSGYQNPEHMNVGQYIASNVPSLKG 300
P R + SK+ KT + ++K + G + + + + + L
Sbjct: 234 PFSIR--------MRNSKIDGKKTTKIKVAKGVGDFVGKADERILKLVDEFSKELEKLD- 284
Query: 301 LRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTT 360
EN T LK +++ + + E + ++ +V ER+++ + +
Sbjct: 285 ---MKIEMEN-TDWLKDVAAANGLMTQVEAAAFHRNRLEEKPEWFSEDVRERLIQGKSAS 340
Query: 361 QDNIKILYKVRNEMRAALQRLLKDDKILVIPTVS--DPPLKLNTKKTYSAEFHDRTLVLS 418
+ ++ + K +L++PTV PPL + E + +
Sbjct: 341 GVEYALARHTQSIAKHRFNEFFKAYDLLLLPTVPVIAPPLHGEG----AVELSRKLTRFT 396
Query: 419 SIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+ ++G + IP GK P+ + + G D FLL
Sbjct: 397 ASFDITGLPAITIPYGKIEGLPVGVQLVAASGRDAFLL 434
>gi|332305904|ref|YP_004433755.1| Amidase [Glaciecola sp. 4H-3-7+YE-5]
gi|332173233|gb|AEE22487.1| Amidase [Glaciecola sp. 4H-3-7+YE-5]
Length = 448
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 126/449 (28%), Positives = 200/449 (44%), Gaps = 83/449 (18%)
Query: 37 RRRNPKLNGRVDFGAFLERFELIPFPQPPPPAAR--QPLAGLKFAIKDVFDVKGYVTGFG 94
+R NPK+N AFL+ P+ P R G+ +KD DVKG+ T G
Sbjct: 36 QRVNPKIN------AFLQ----TALPKCAPQETRTGSVFQGICIGVKDNIDVKGFATTAG 85
Query: 95 SPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHI 154
R +A++ A V+ L + GA IGK + E A G T +N+H+G NP +
Sbjct: 86 MA--TRIGRQAKQDAFVINRLRQTGAQFIGKLNMHEGALGATNQNEHFGDCHNPHKHGYT 143
Query: 155 PGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSL 214
PGGSS GSA AVA+ +V +LGTDT+G VR+PA++CGI G++PS G VS G + S+ +
Sbjct: 144 PGGSSGGSAAAVASGMVGLSLGTDTMGSVRIPAAYCGIFGFKPSRGAVSNHGSVTCSRVM 203
Query: 215 DTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIE 274
D++G +AR+A L V + A + A + F KAI+
Sbjct: 204 DSIGPMARSAKDLTLAISV---MKAFDESCAASIDF--------------------KAID 240
Query: 275 SLSGYQNPEHMNVGQYIASNVP-SLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTI 333
+ N + VP +L+GL S + +A L A + + +L+ ++F
Sbjct: 241 CFTASDNKVLL---------VPENLEGLGVSSDVAADFSANLSAFTDLGYTLEYFDFS-- 289
Query: 334 YEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNEMRAAL--------------Q 379
++ +A R G + E + + +D + K MR L +
Sbjct: 290 --DYDFAAARRAGLLLCEADMR-VEHQEDWLNQPQKFSEYMRGMLSYIERKTPMDIMQSE 346
Query: 380 RLLKDDKI-----------LVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQ 428
R+L + KI +++PTV L +++ L+S + +G
Sbjct: 347 RVLDNAKIFARQLFKQGCAILMPTV------LQRAFSFAQPVPANQADLTSFANQAGLPA 400
Query: 429 VAIPIGKYNEHPISISFITYHGGDKFLLD 457
V++P+ N P + + G D LLD
Sbjct: 401 VSLPMLSDNILPAGMQIVGPLGSDNQLLD 429
>gi|297530427|ref|YP_003671702.1| amidase [Geobacillus sp. C56-T3]
gi|297253679|gb|ADI27125.1| Amidase [Geobacillus sp. C56-T3]
Length = 470
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 185/419 (44%), Gaps = 45/419 (10%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERT--AVVVTLLLKNGATCIGKTV 127
R PL G+ AIKD+ V T GS + H T A V+ L + GA GKT
Sbjct: 70 RGPLHGIPIAIKDILYVANETTTMGS----KIHRNFRPTYSATVIEKLTEAGAVFPGKTN 125
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
L E+A+G T N H+G NP P IPGGSS GS VA AA + +LGTDT G +R+P+
Sbjct: 126 LHEYAWGATNNNPHFGPARNPWDPERIPGGSSGGSGVATAAHMTIASLGTDTGGSIRIPS 185
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
SFCGI+G +P++G VS G P + SLD +G +A+ A ++L + +P+
Sbjct: 186 SFCGIVGLKPTYGLVSKYGCFPLAWSLDHIGPMAKTA---RDAAYILEAMAGYDPKDPTS 242
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPS--LKGLRAQS 305
+ P ++ +ES+ G + + + Y +V + ++
Sbjct: 243 ----------TNAPATS---YSTQFMESVKGVK----IGIEPYFFDHVDEGVERAVKQAI 285
Query: 306 TSPENGTATLKALSSVMLSLQRY--------EFKTIYEEWVKSAKPRLGYNVFERVLEAI 357
S E A ++ + L +Y E I+ + + G +V R L +
Sbjct: 286 ASLEREGAVVETVRIPTLQYAQYAEMITILSEASAIHHNHLVEREEDFGDDV--RFLLKL 343
Query: 358 NTTQDNIKIL--YKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTY----SAEFH 411
+ L ++R ++ + +L+ PT+ P K+ + F
Sbjct: 344 GELPSAVDYLEAQQIRLKLDHEFMEIFNKVDVLITPTIPFLPPKIGQDTVWINGEEVNFL 403
Query: 412 DRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQV 470
D + + +++G V +P G P+ + I G+ +L+ V D++++L ++
Sbjct: 404 DHIIRFTGPFNLTGLPVVTVPCGFVQGLPVGMQIIGPAFGEGTILN-VADVFETLHPEL 461
>gi|294659972|ref|XP_462424.2| DEHA2G20284p [Debaryomyces hansenii CBS767]
gi|199434372|emb|CAG90934.2| DEHA2G20284p [Debaryomyces hansenii CBS767]
Length = 490
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 95/144 (65%), Gaps = 2/144 (1%)
Query: 101 DHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQM--PSHIPGGS 158
D++ + A V++LL + G+T +GK LDEF G N +YG VNP HI GGS
Sbjct: 80 DNYYSPFDATVISLLEEQGSTMVGKANLDEFGMGSANVNSYYGHAVNPLFTEEEHITGGS 139
Query: 159 SSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVG 218
S GSA ++ + L F+LGTDT G VR+PAS+CGI+G +P++G +S GV+P +QSLDTVG
Sbjct: 140 SGGSAASIQSDLATFSLGTDTGGSVRLPASYCGIVGLKPTYGRISRWGVIPYAQSLDTVG 199
Query: 219 LLARNASILHRVGHVLLQLNAVEP 242
+LA++ + +V VL + + +P
Sbjct: 200 ILAKDVETVQKVFKVLDKHDPKDP 223
>gi|332530245|ref|ZP_08406191.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
[Hylemonella gracilis ATCC 19624]
gi|332040231|gb|EGI76611.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
[Hylemonella gracilis ATCC 19624]
Length = 469
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 187/395 (47%), Gaps = 51/395 (12%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ A+KD+F++ G GS + + TA VV L GA IGKT E+
Sbjct: 75 PLHGVTVAVKDLFEIDGKPITSGSV--AQPARISTTTATVVQRLRSAGAIVIGKTHTVEY 132
Query: 132 AFGITGENKHYGTPVNP-QMPSH-IPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
AFG G N+ GTP NP + +H IPGGSSSGSAVAVAA L A+GTDT G VR+PA
Sbjct: 133 AFGGWGTNEVMGTPWNPWDLRTHRIPGGSSSGSAVAVAAGLACAAIGTDTGGSVRIPAGL 192
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNA-VEPRRA--- 245
CG++G + +HG +S G++ S DTVG LAR R +LL + A +PR A
Sbjct: 193 CGLVGLKTTHGLISRHGLIELCPSHDTVGPLARTV----RDCALLLDVMAGADPRDAVSQ 248
Query: 246 ----RRLIFADDIFQLSKVPKLKTIHVISKA-IESLSGYQNPEHMNVGQYIASNVPSLKG 300
R++ A D+ L + +L + +A +E+ E ++V L+G
Sbjct: 249 GAPVRQI--APDLKALPRGARLWVLPTAERAGVEAAVLATYDEALDV----------LRG 296
Query: 301 LRAQSTS---PENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAI 357
+ Q P++ +++ +M + + ++E ++ R N+ R+L
Sbjct: 297 MGMQLVERNLPQSCAESMRIAGQLMSAEGYAQLGPLFER----SELRFDPNIRRRILLGS 352
Query: 358 NTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPT--VSDPPLKLNTKKTYSAEFHDRTL 415
+ + L + R+ R + + V PT +S P+ AE +
Sbjct: 353 GISAQQYQDLLRSRDRARRDMLNAMDGIDACVFPTNAISAIPV---------AEVDELAT 403
Query: 416 VLSSIG---SMSGCCQVAIPIGKYNE-HPISISFI 446
LS G ++ C +A+P G E PISI FI
Sbjct: 404 PLSRFGRFVNLMNLCALAVPAGMSPEGMPISIQFI 438
>gi|271966000|ref|YP_003340196.1| amidase [Streptosporangium roseum DSM 43021]
gi|270509175|gb|ACZ87453.1| amidase [Streptosporangium roseum DSM 43021]
Length = 393
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 101/183 (55%), Gaps = 8/183 (4%)
Query: 60 PFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNG 119
P P PP L F +KD+ DV G T GS + + EA TA V LL + G
Sbjct: 41 PVPATPPE-----LWAWTFVVKDMIDVAGLRTTRGSALYGSE--EALTTAPCVELLERAG 93
Query: 120 ATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDT 179
A +GK EFA+G+T EN H+G NP+ PGGSS G+A A+AA + F LGTDT
Sbjct: 94 ALLVGKANQHEFAWGVTSENPHWGDVRNPRHEHLAPGGSSGGTAAALAAGIARFGLGTDT 153
Query: 180 IGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNA 239
G VR+PA+ CG++G RP G +S GV P + D VG +A + + RV V L A
Sbjct: 154 GGSVRIPAACCGVVGLRPRAGAISTEGVAPLAPMFDVVGPMATSVADCARVWQV-LSGEA 212
Query: 240 VEP 242
VEP
Sbjct: 213 VEP 215
>gi|386334432|ref|YP_006030603.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Ralstonia
solanacearum Po82]
gi|334196882|gb|AEG70067.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Ralstonia
solanacearum Po82]
Length = 448
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 94/164 (57%), Gaps = 5/164 (3%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTA--VVVTLLLKNGATCIGKTVLDE 130
LAGL +IKD+FDV G V+ GS + H+ TA V V L GA +G+T + E
Sbjct: 73 LAGLPVSIKDLFDVAGQVSAAGS---RALAHQPPATADAVAVARLRAAGAVLLGRTNMSE 129
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FAF G N HYGTP P + GGS+SG AV VA + ALGTDT G +R+PA+FC
Sbjct: 130 FAFSGLGLNPHYGTPRTPADGARAAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPAAFC 189
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL 234
+ G++P+ V M G +P S SLD+ G LA + V VL
Sbjct: 190 ALTGFKPTARRVPMAGGVPLSTSLDSGGPLANSVDCCAIVDAVL 233
>gi|148359281|ref|YP_001250488.1| glutamyl/tRNA (Gln) amidotransferase subunit A [Legionella
pneumophila str. Corby]
gi|296107326|ref|YP_003619026.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Legionella
pneumophila 2300/99 Alcoy]
gi|166217678|sp|A5ICP2.1|GATA_LEGPC RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|148281054|gb|ABQ55142.1| glutamyl/tRNA (Gln) amidotransferase, A subunit [Legionella
pneumophila str. Corby]
gi|295649227|gb|ADG25074.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Legionella
pneumophila 2300/99 Alcoy]
gi|307610433|emb|CBX00003.1| glutamyl-tRNA(Gln) amidotransferase [Legionella pneumophila 130b]
Length = 483
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 179/407 (43%), Gaps = 30/407 (7%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
+PL G+ A+KD+F K T S + +A A +VT +NGA IGKT +DE
Sbjct: 65 KPLTGIPMALKDLFCTKRLNTTCASKMLA--NFQAPYDATIVTKFKQNGAIIIGKTNMDE 122
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FA G + EN ++G+ NP +PGGSS GSA AVA LV FA+G+DT G +R PA+FC
Sbjct: 123 FAMGSSNENSYFGSVKNPWDRERVPGGSSGGSAAAVAGNLVPFAIGSDTGGSIRQPAAFC 182
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIF 250
GI G +P++G VS G++ + SLD G A++A L + H + ++ + R+I
Sbjct: 183 GISGIKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAMILHCIAGFDSKDSTSVDRVI- 241
Query: 251 ADDIFQLSK--------VPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLR 302
D ++ K +P + K I+ N+G I L+ L
Sbjct: 242 PDYSAEIKKPVDKIRIGLPSCFFQPQVEKGIQDAIHDAVKLFENLGAEIIEIDLKLQPLW 301
Query: 303 AQS---TSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINT 359
+ ++ L + + T+ E S G V R+L +
Sbjct: 302 VPCYYVIACAEASSNLSRYDGIRFGHRSKSASTLIELITNSRSEGFGNEVKRRILTGTHV 361
Query: 360 TQDNIKILY-----KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTK-----KTYSAE 409
Y KVR +R L L +++ PT KL K + Y A+
Sbjct: 362 LSTGFFNAYYLHAQKVRRLIRDELITTLNSVDVIIGPTTPTTAFKLGEKINDPIQNYLAD 421
Query: 410 FHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
V + +++G ++IP G N+ PI + + H + LL
Sbjct: 422 ------VFTVAANLAGLPAISIPTGFENKLPIGLQLMGKHFSESRLL 462
>gi|441209590|ref|ZP_20974275.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Mycobacterium
smegmatis MKD8]
gi|440627081|gb|ELQ88901.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Mycobacterium
smegmatis MKD8]
Length = 413
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 179/411 (43%), Gaps = 66/411 (16%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
PL G+ A+KD+FD+ G T GS A+ A V+ L ++GA +GKTVL
Sbjct: 33 HSPLQGIPVAVKDLFDMAGLPTTCGSAS-SFGTARADIDAEVIGDLRRSGAVIVGKTVLH 91
Query: 130 EFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
EFAFG TG+ +G NP + GGSS GSAVAVA+ +V +LGTDT G VRVPA+
Sbjct: 92 EFAFGATGDRSAHGPSRNPHDRLRVSGGSSGGSAVAVASGMVPLSLGTDTAGSVRVPAAL 151
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLA------------------RNASILHRVG 231
CG++G++P+ +S+ GV P + SLD VGL ++ + L R+G
Sbjct: 152 CGVVGFKPAFDVISVKGVHPLAPSLDHVGLFGASLADTKPLYEILSSTTMKDTAPLSRIG 211
Query: 232 HVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYI 291
++ +A+ P D + + + ++ A ++SGY E
Sbjct: 212 --WIEPDAIAPTDTEITAAVRDALRRAGIG-------VAAATSTVSGYDPGE-------- 254
Query: 292 ASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFE 351
L S+ +LQ E ++ + + + + + VF
Sbjct: 255 --------------------------LFSIFTALQAREAYDVHRDHLDADEHLIDPGVFA 288
Query: 352 RVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPT--VSDPPLKLNTKKTYSAE 409
R+ T + R RA + L + +L +P+ ++ P L T +
Sbjct: 289 RLRVGQTVTDSAFADAQRARRGFRAVVDAALDEYGVLALPSTPITAPLLHQTTTEIGGKT 348
Query: 410 FHDRT--LVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDT 458
R L L+S +++G ++IP G + P I I G + L T
Sbjct: 349 VDTRAALLSLTSPWNLTGSPAISIPGGHLHGLPFGIQLIASPGQEALLFAT 399
>gi|56419927|ref|YP_147245.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Geobacillus
kaustophilus HTA426]
gi|56379769|dbj|BAD75677.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Geobacillus
kaustophilus HTA426]
Length = 470
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 185/419 (44%), Gaps = 45/419 (10%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERT--AVVVTLLLKNGATCIGKTV 127
R PL G+ AIKD+ V T GS + H T A V+ L + GA GKT
Sbjct: 70 RGPLHGIPIAIKDILYVANETTTMGS----KIHRNFRPTYSATVIEKLTEAGAVFPGKTN 125
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
L E+A+G T N H+G NP P IPGGSS GS VA AA + +LGTDT G +R+P+
Sbjct: 126 LHEYAWGATNNNPHFGPARNPWDPERIPGGSSGGSGVATAAHMTIASLGTDTGGSIRIPS 185
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
SFCGI+G +P++G VS G P + SLD +G +A+ A ++L + +P+
Sbjct: 186 SFCGIVGLKPTYGLVSKYGCFPLAWSLDHIGPMAKTA---RDAAYILEAMAGYDPKDPTS 242
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPS--LKGLRAQS 305
+ P ++ +ES+ G + + + Y +V + ++
Sbjct: 243 ----------TDAPATS---YSTQFMESVKGVK----IGIEPYFFDHVDEGVERAVKQAI 285
Query: 306 TSPENGTATLKALSSVMLSLQRY--------EFKTIYEEWVKSAKPRLGYNVFERVLEAI 357
S E A ++ + L +Y E I+ + + G +V R L +
Sbjct: 286 ASLEREGAVVETVRIPTLQYAQYAEMITILSEASAIHHNHLVEREEDFGDDV--RFLLKL 343
Query: 358 NTTQDNIKIL--YKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTY----SAEFH 411
+ L ++R ++ + +L+ PT+ P K+ + F
Sbjct: 344 GELPSAVDYLEAQQIRLKLDHEFMEIFNKVDVLITPTIPFLPPKIGQDTVWINGEEVNFL 403
Query: 412 DRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQV 470
D + + +++G V +P G P+ + I G+ +L+ V D++++L ++
Sbjct: 404 DHIIRFTGPFNLTGLPVVTVPCGFVQGLPVGMQIIGPAFGEGTILN-VADVFETLHPEL 461
>gi|349687022|ref|ZP_08898164.1| amidase [Gluconacetobacter oboediens 174Bp2]
Length = 457
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 98/159 (61%), Gaps = 1/159 (0%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ F +KD+FDV+G VT GS RD+ A R A VV L GA + +DEF
Sbjct: 73 PLAGVPFGVKDLFDVRGEVTTAGS-IVLRDNLPATRDAEVVERLRAAGAVPVATLNMDEF 131
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+G + EN H GT NP P+ + GGSS GSA +VAA L+ F LG+DT G +RVP+S CG
Sbjct: 132 AYGFSTENAHTGTTRNPHDPARLAGGSSGGSAASVAAGLLPFTLGSDTNGSIRVPSSLCG 191
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRV 230
+ G +P++G + + GV P SLD VG +A L V
Sbjct: 192 VWGLKPTYGQMPLRGVYPFVASLDVVGPMADTVEDLRAV 230
>gi|440738016|ref|ZP_20917565.1| amidase [Pseudomonas fluorescens BRIP34879]
gi|440381490|gb|ELQ18018.1| amidase [Pseudomonas fluorescens BRIP34879]
Length = 374
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 127/401 (31%), Positives = 182/401 (45%), Gaps = 55/401 (13%)
Query: 75 GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFG 134
G +KD D+ G T S D A A VV LL G +GKT L E AFG
Sbjct: 14 GPTVMVKDTIDIAGLPT-RASSQALDDAAPAAAHAEVVQALLDKGCRLVGKTSLHELAFG 72
Query: 135 ITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILG 194
TG N GT NP+ P IPGGSSSGSA AVAA L DF+LGTDT G VR+PA CG+ G
Sbjct: 73 TTGINHWVGTAPNPRFPGRIPGGSSSGSAAAVAAGLADFSLGTDTGGSVRIPACCCGVFG 132
Query: 195 YRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDI 254
++P+ G +S GV+P SLD VG A + +L + + A++P
Sbjct: 133 FKPTFGRISRRGVMPTHSSLDCVGPFAASLPML------VTAMQAIDP-----------T 175
Query: 255 FQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPS----LKGLRAQSTSPEN 310
FQ P + ++S +++ + Q H+ S +PS L L+A
Sbjct: 176 FQPVAAPAAPRLGIVS--VQAGAAVQ---HVIDAAIADSRLPSETLTLPSLKA------- 223
Query: 311 GTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKV 370
A + M+ + R F + + K +G ++ R+ A NTT + +V
Sbjct: 224 ------AYEAGMVVINRETFDAC-GHLLDTGK--VGADIAARLAAAGNTTSAALAQAEQV 274
Query: 371 RNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIG-----SMSG 425
R + A + L+ +LV+PT+ D PL L AE D VL ++SG
Sbjct: 275 RAQFSAEVDAALQQVDVLVLPTMPDFPLTL-------AEATDTQAVLGMTAFVRPFNLSG 327
Query: 426 CCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSL 466
++IP+ P+ + + G D+ LL L + L
Sbjct: 328 HPALSIPLASAEGLPVGLQLVGGKGTDEQLLAIAGRLLERL 368
>gi|422616296|ref|ZP_16685002.1| allophanate hydrolase, partial [Pseudomonas syringae pv. japonica
str. M301072]
gi|330895812|gb|EGH28101.1| allophanate hydrolase, partial [Pseudomonas syringae pv. japonica
str. M301072]
Length = 501
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 127/409 (31%), Positives = 181/409 (44%), Gaps = 63/409 (15%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R PL G+ FA+KD FDV T P + + E A VV LLL +GA +GKT LD
Sbjct: 74 RLPLFGVPFAVKDNFDVAHMPTTAACPAFA---YVPEDNAHVVQLLLDSGAILMGKTNLD 130
Query: 130 EFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
+FA G+ G YG N P+++ GGSSSGSAVAVA V FALGTDT G RVPA F
Sbjct: 131 QFATGLVGVRSPYGAVRNAHDPAYVSGGSSSGSAVAVARGYVSFALGTDTAGSGRVPAGF 190
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
GI+G +PS G S GV+P ++LD + A++ +V V + A +P A +
Sbjct: 191 NGIVGLKPSLGLFSSRGVVPACRTLDCPSIFAKDVMQAWQVAQV---IAAYDPLDASSVA 247
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
Q H E Q A+ LK L A P
Sbjct: 248 VQALPVQRRVRRVAVARHC--------------EFFGDEQAKAA---YLKTLEALQNDP- 289
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYE-EWVKSAKPRLG----------YNVFERVLEAIN 358
L +S++ + +Y+ WV + +G + V ++++ +
Sbjct: 290 -----LVTVSTIEFDVFAEAAALLYQGPWVAERRAAIGEFFASNAADIHPVVRGIVQSAD 344
Query: 359 TTQ--DNIKILYKVRNEMRAALQRLLKDDKILVIPT---------VSDPPLKLNTKKTYS 407
+ D Y++ RAA Q+LL D +LV+PT V P+ LN++ YS
Sbjct: 345 SFDAVDTFNARYRLAELTRAA-QQLLTDIDVLVVPTAPCMPTIEAVLGNPVALNSQLGYS 403
Query: 408 AEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEH-PISISFITYHGGDKFL 455
F + + C +AIP G+ + P I+ I G D+ L
Sbjct: 404 TNFVN----------LMNMCAIAIPTGRRADGLPAGITLIGPAGADQRL 442
>gi|167576828|ref|ZP_02369702.1| pyrazinamidase/nicotinamidase [Burkholderia thailandensis TXDOH]
Length = 375
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/149 (50%), Positives = 91/149 (61%), Gaps = 1/149 (0%)
Query: 75 GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFG 134
G AIKD D+ G T G+ D AER A VV +L G +GK + E AFG
Sbjct: 14 GPTIAIKDTIDIAGRRT-TGASRALADAPPAERHAEVVQRVLDAGWRIVGKANMHELAFG 72
Query: 135 ITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILG 194
+TG N + GTPVNPQ P+ IPGGSSSGSA V LVD ALGTDT G +R PA+ CG++G
Sbjct: 73 MTGINDYTGTPVNPQDPTRIPGGSSSGSASLVGLGLVDAALGTDTGGSIRGPAACCGVIG 132
Query: 195 YRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
+P+ G VS GV P +LD VG AR+
Sbjct: 133 LKPTFGRVSRRGVAPVDSTLDCVGPFARD 161
>gi|397667463|ref|YP_006509000.1| Glutamyl-tRNA(Gln) amidotransferase (subunit A) [Legionella
pneumophila subsp. pneumophila]
gi|395130874|emb|CCD09123.1| Glutamyl-tRNA(Gln) amidotransferase (subunit A) [Legionella
pneumophila subsp. pneumophila]
Length = 483
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 179/407 (43%), Gaps = 30/407 (7%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
+PL G+ A+KD+F K T S + +A A +VT +NGA IGKT +DE
Sbjct: 65 KPLTGIPMALKDLFCTKRLNTTCASKMLA--NFQAPYDATIVTKFKQNGAIIIGKTNMDE 122
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FA G + EN ++G+ NP +PGGSS GSA AVA LV FA+G+DT G +R PA+FC
Sbjct: 123 FAMGSSNENSYFGSVKNPWDRERVPGGSSGGSAAAVAGNLVPFAIGSDTGGSIRQPAAFC 182
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIF 250
GI G +P++G VS G++ + SLD G A++A L + H + ++ + R+I
Sbjct: 183 GISGIKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAMILHCIAGFDSKDSTSVDRVI- 241
Query: 251 ADDIFQLSK--------VPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLR 302
D ++ K +P + K I+ N+G I L+ L
Sbjct: 242 PDYSAEIKKPVDKIRIGLPSCFFQPQVEKGIQDAIHDAVKLFENLGAEIIEIDLKLQPLW 301
Query: 303 AQS---TSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINT 359
+ ++ L + + T+ E S G V R+L +
Sbjct: 302 VPCYYVIACAEASSNLSRYDGIRFGHRSKSASTLIELITNSRSEGFGNEVKRRILTGTHV 361
Query: 360 TQDNIKILY-----KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTK-----KTYSAE 409
Y KVR +R L L +++ PT KL K + Y A+
Sbjct: 362 LSSGFFDAYYLHAQKVRRLIRDELITTLNSVDVILGPTTPTTAFKLGEKINDPIQNYLAD 421
Query: 410 FHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
V + +++G ++IP G N+ PI + + H + LL
Sbjct: 422 ------VFTVAANLAGLPAISIPTGFENKLPIGLQLMGKHFSESRLL 462
>gi|352079982|ref|ZP_08951051.1| Amidase [Rhodanobacter sp. 2APBS1]
gi|351684691|gb|EHA67760.1| Amidase [Rhodanobacter sp. 2APBS1]
Length = 465
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 182/388 (46%), Gaps = 23/388 (5%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A+KD FD+ G+ T G P + E A VV L +GA +GKT +DE A
Sbjct: 79 LDGIPIALKDNFDIAGWPTRVGLPGRGKPVRE---DAHVVARLRASGAVLLGKTNMDEGA 135
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G +N H G NP + GGSS G+A AVAA L A+G+D++G +R+PAS+CG+
Sbjct: 136 LGAVTDNPHSGATHNPHRHGYTAGGSSGGAAAAVAAGLAVAAVGSDSLGSIRIPASYCGV 195
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
+P+HG +S G++P ++ LD VGLLAR+A L VLLQ+ A R
Sbjct: 196 YALKPTHGEISARGLVPAARRLDAVGLLARSADDL----TVLLQVLAGYDADDARSRRRR 251
Query: 253 DIFQLSKVPKLKTIHVISKAIESLSGYQ-NPEHMNVGQYIASNVPSLKGLRAQSTSPENG 311
F L P + ++ + + L+ PE + V + + +P G R +
Sbjct: 252 VAFAL---PDWEPGNLRAGLLPDLAAVGVQPEVIEVFEAAMAKLPHALGDRRTVDFADWD 308
Query: 312 TATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLE-AINTTQDNIKILYKV 370
A + + +L ++ T + S +P F R+L A + + + +V
Sbjct: 309 FARTR--RAGLLLMEAEMLGTFAADLADSRRPV--SERFRRLLGYAAGKSAADYAVADRV 364
Query: 371 RNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVA 430
+ ++RL +LV+PT L+ D L+S S++GC V+
Sbjct: 365 LDAATLKMRRLFAQVDVLVLPTTPQGAFPLD------GPVPDSQADLTSFASLAGCPAVS 418
Query: 431 IPIGKY-NEHPISISFITYHGGDKFLLD 457
+P+G N P+ + + G D LL+
Sbjct: 419 LPMGMLPNGMPVGLQLVGARGSDLRLLE 446
>gi|384247058|gb|EIE20546.1| allophanate hydrolase [Coccomyxa subellipsoidea C-169]
Length = 530
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 95/158 (60%), Gaps = 3/158 (1%)
Query: 66 PPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGK 125
PPAAR PL G+ FA+KD DV G+ T ++ + ++A V LL+ G +GK
Sbjct: 59 PPAARGPLYGVPFAVKDNIDVAGFPTTAACEAYR---YTPSQSAPGVEALLEAGGVMVGK 115
Query: 126 TVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
T LD+FA G+ G YGT NP +PGGSSSGS AV L+ FALGTDT G RV
Sbjct: 116 TNLDQFAAGLVGTRTPYGTARNPFDDRFLPGGSSSGSGAAVGCGLLTFALGTDTAGSGRV 175
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
PA FCG +G +P+ G VS GV+ ++LD + + AR+
Sbjct: 176 PAHFCGCVGIKPTVGRVSSTGVVRACRALDCISVFARS 213
>gi|395004510|ref|ZP_10388548.1| allophanate hydrolase [Acidovorax sp. CF316]
gi|394317567|gb|EJE54097.1| allophanate hydrolase [Acidovorax sp. CF316]
Length = 578
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 103/180 (57%), Gaps = 4/180 (2%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL+GL FA+KD DV + T P + + A A VV LL GAT +GKT LD+F
Sbjct: 42 PLSGLTFAVKDNIDVACHPTSAACPAFA---YTATAHAAVVQRLLDAGATLVGKTNLDQF 98
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G+ G +G N P+++ GGSSSGSA VA + VDFALGTDT G RVPA
Sbjct: 99 ACGLNGTRSPHGAVPNALDPAYVSGGSSSGSAYVVATEQVDFALGTDTAGSGRVPAGLNN 158
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
I+G +P+ G VS GV+P +QS D V + AR + RV V +A +P R+L A
Sbjct: 159 IVGIKPTKGLVSARGVVPAAQSADCVSIFARTVDLAARVLQVAQGYDAQDP-YGRQLTLA 217
>gi|163846950|ref|YP_001634994.1| amidase [Chloroflexus aurantiacus J-10-fl]
gi|222524774|ref|YP_002569245.1| amidase [Chloroflexus sp. Y-400-fl]
gi|163668239|gb|ABY34605.1| Amidase [Chloroflexus aurantiacus J-10-fl]
gi|222448653|gb|ACM52919.1| Amidase [Chloroflexus sp. Y-400-fl]
Length = 528
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/328 (33%), Positives = 155/328 (47%), Gaps = 11/328 (3%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R PL G+ A+KD+FDV GY T GS R A + VV L GA IGKT +
Sbjct: 142 RSPLHGVPIAVKDLFDVAGYPTAAGS--RIRAGVMASSDSTVVARLRAAGAIIIGKTRMS 199
Query: 130 EFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
EFA+ N HYG NP P GGSSSGSAVAV+ + A+GTDT G +R+PA+
Sbjct: 200 EFAYSPGSNNAHYGPTANPYHPERDSGGSSSGSAVAVSTVMAYAAIGTDTGGSIRIPAAH 259
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
CGI+G +P+HG VS+ G P S SLD G LAR+ + V+LQ A R R +
Sbjct: 260 CGIVGLKPTHGRVSLAGGFPLSWSLDHAGPLARSVAD----AAVILQAIAGPDPRDHRTL 315
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
+ F +S + L I + + + G G V R + P
Sbjct: 316 RPESPFAVSGL--LDYIDQVRIGLLTADGSGQAITDAAGLAAMQRVADALAERGATVIPI 373
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEA-INTTQDNIKILY 368
L+AL + +L E ++ W++S G + +R+L A I + D +++
Sbjct: 374 E-VPELEALRLLNPALLAIEAAALHLPWLRSRLDEYGEFMRQRILAAFIYSPVDAVRVQQ 432
Query: 369 KVRNEMRAALQRLLKDDKILVIPTVSDP 396
N R +RL D +L+ P P
Sbjct: 433 ARANLRRRVAERLAGID-VLITPVTPGP 459
>gi|295701185|ref|YP_003610186.1| amidase [Burkholderia sp. CCGE1002]
gi|295441508|gb|ADG20675.1| Amidase [Burkholderia sp. CCGE1002]
Length = 447
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 100/176 (56%), Gaps = 3/176 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ F++KD G+ G+P + A R A++V L GA GK + E
Sbjct: 62 PLYGIPFSLKDNICASGFPVTAGTP--GMEGCIATRDAIIVRKLKSLGAVVAGKNNMHEL 119
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
+FGIT N +GT NP P ++ GGSS G A AVAA +V A+GTDT G VR+PA+FCG
Sbjct: 120 SFGITSVNPRWGTVGNPTAPGYLAGGSSGGCAAAVAAGIVPIAIGTDTGGSVRIPAAFCG 179
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
I+G+RP+ G S G++P S++ D+ GLL R A + H LL P + R
Sbjct: 180 IVGFRPTSGHWSSAGIIPVSRTKDSPGLLTRTAKDALMI-HELLSTGTRPPAKQIR 234
>gi|410618064|ref|ZP_11329024.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Glaciecola polaris LMG 21857]
gi|410162354|dbj|GAC33162.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Glaciecola polaris LMG 21857]
Length = 448
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 114/195 (58%), Gaps = 10/195 (5%)
Query: 33 ETLRRRRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTG 92
L R NPK+N AF+ R+++ FPQP + G+ +KD DV+G+VT
Sbjct: 32 HALIERLNPKIN------AFI-RYQMPEFPQPTS-FEKSLFQGVCIGVKDNIDVQGFVTT 83
Query: 93 FGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPS 152
G + D H A++ A V+ L + G +GK + E A G T +N+H+G NP
Sbjct: 84 AGMAT-RIDRH-AKQDAFVINRLRQTGVQVMGKLNMHEGALGATNKNEHFGNCHNPHKHG 141
Query: 153 HIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQ 212
PGGSS GSA AVA+ +V +LGTDT+G +R+PA++CGI G++PS G VS G + S+
Sbjct: 142 FTPGGSSGGSAAAVASGMVGLSLGTDTMGSLRIPAAYCGIFGFKPSRGAVSNYGSVTCSR 201
Query: 213 SLDTVGLLARNASIL 227
+D +G +AR+A L
Sbjct: 202 VMDNIGPIARSARDL 216
>gi|148557083|ref|YP_001264665.1| amidase [Sphingomonas wittichii RW1]
gi|148502273|gb|ABQ70527.1| Amidase [Sphingomonas wittichii RW1]
Length = 377
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/149 (53%), Positives = 93/149 (62%), Gaps = 1/149 (0%)
Query: 75 GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFG 134
G + A+KD DV G TG GS + A A VV +L G +GKTV+ E AFG
Sbjct: 16 GPRVAVKDCIDVAGTRTGCGSRALA-ETEPASGHARVVRQVLDAGGHLVGKTVMHELAFG 74
Query: 135 ITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILG 194
+TG N GTP NP MP HIPGGSSSGSA AVAA D ALGTDT G +R+PA+ CGI+G
Sbjct: 75 VTGINHWAGTPANPAMPGHIPGGSSSGSAAAVAAGEADVALGTDTGGSIRMPAACCGIIG 134
Query: 195 YRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
+PS G V GV P + SLD VG +AR
Sbjct: 135 LKPSFGLVGRQGVHPAASSLDCVGPMART 163
>gi|443470038|ref|ZP_21060174.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Pseudomonas
pseudoalcaligenes KF707]
gi|442899569|gb|ELS26003.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Pseudomonas
pseudoalcaligenes KF707]
Length = 367
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 172/417 (41%), Gaps = 85/417 (20%)
Query: 75 GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFG 134
G +KD DV G+ T S + +A R A VV LL G GKT L E AFG
Sbjct: 11 GRTVMVKDTIDVAGHPTRASSRALD-EAPDAPRHAEVVQALLDAGCRITGKTSLHELAFG 69
Query: 135 ITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILG 194
TG N GT NP+ P IPGGSSSGSA AVAA L DF+LGTDT G VR+PA+ CG+ G
Sbjct: 70 TTGLNAWTGTAENPRYPGRIPGGSSSGSAAAVAAGLCDFSLGTDTGGSVRIPAACCGVFG 129
Query: 195 YRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDI 254
+P+ G +S +GV+P SLD VG A R+ ++ + A++P
Sbjct: 130 LKPTFGRISRVGVMPAESSLDCVGPFA------ARIDLLIEAMAAMDP------------ 171
Query: 255 FQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTAT 314
+P ++ + + G+ S PE A
Sbjct: 172 -GFKALPPVEGVRI-------------------------------GVVPVSAHPEVLAAI 199
Query: 315 LKALSSVMLSLQRYEFKTIY------------EEWVKSA----KPRLGYNVFERVLEAIN 358
AL ++ L R + E W +G +V R+ A
Sbjct: 200 ETALKAIDFPLDRMPLPGMQAAYDAGLAIINRETWNACGHLLETGLVGADVAARLQAASL 259
Query: 359 TTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLS 418
T+ + VR A + L IL +PT+ D Y A D + +
Sbjct: 260 TSDQALADAEAVRRAFTAEVDAALDRCPILALPTMPD----------YPARVADASDTRA 309
Query: 419 SIG--------SMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQ 467
+IG +++G ++IP+ ++ P+ + + G D+ LL +L L+
Sbjct: 310 AIGMTAFVRPFNLTGHPALSIPLEGASKLPVGLQLVAAKGADERLLAVARELVRRLE 366
>gi|409405650|ref|ZP_11254112.1| amidase family protein [Herbaspirillum sp. GW103]
gi|386434199|gb|EIJ47024.1| amidase family protein [Herbaspirillum sp. GW103]
Length = 450
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 124/412 (30%), Positives = 185/412 (44%), Gaps = 56/412 (13%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R PL G+ ++KD+FDV G T GS R A AVVV LLK GA IGKT +
Sbjct: 66 RSPLEGVPVSVKDLFDVAGETTLAGSVVL-RGKPAAAAHAVVVQNLLKAGAIVIGKTNMT 124
Query: 130 EFAFGITGENKHYGTPVNPQM----PSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
EFA+ G N HYGTP N IPGGSSSG+A++V + A+G+DT G VR+
Sbjct: 125 EFAYSGLGINPHYGTPQNAWERNVEGGRIPGGSSSGAAISVTDGMAFAAVGSDTGGSVRI 184
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN---ASILHRV--GHVLLQLNAV 240
P++ G+ G++P+ VSM GVLP S LD++G LA + +I+ V G + + A
Sbjct: 185 PSALNGLTGFKPTAARVSMQGVLPLSAYLDSIGPLAVSVECCAIMDAVLAGEAYVSVVA- 243
Query: 241 EPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKG 300
P R RL+ +I + + A++ L+ + + VP+
Sbjct: 244 HPLRGLRLLAPTNIVLDGMDETVGKAY--RAALDKLAAAG-------AVIVQAEVPAFNA 294
Query: 301 LRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKS--AKPRLGYN--VFERVLEA 356
L A + + G +A + W ++ A+ GY+ V R+L
Sbjct: 295 LAA--INAKGGFTAAEAYA-----------------WHRALIAENAAGYDQRVVSRILRG 335
Query: 357 INTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTV-----SDPPLKLNTKKTYSAE-- 409
+ + ++ + R A +Q L LV+PTV L+ + Y+A
Sbjct: 336 KDMSAADLLDVLHARPRWIAEVQAQLAGYDALVMPTVPIVAPRIAELQASDDAYYAANGK 395
Query: 410 -FHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVL 460
+ TL I + GC V++P P+ +S G DK LL L
Sbjct: 396 MLRNPTL----INFLDGCA-VSLPCHAAGSAPVGLSLAAAGGADKRLLSMAL 442
>gi|434397558|ref|YP_007131562.1| amidohydrolase, AtzE family [Stanieria cyanosphaera PCC 7437]
gi|428268655|gb|AFZ34596.1| amidohydrolase, AtzE family [Stanieria cyanosphaera PCC 7437]
Length = 457
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/229 (36%), Positives = 120/229 (52%), Gaps = 19/229 (8%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAG+ FA+K++FDV+G T GS +D+ A+ A + LL + GA +G +DE+A
Sbjct: 66 LAGVPFAVKNLFDVQGITTLAGS-KINQDNSPAQEDATAIALLKQAGAILVGTLNMDEYA 124
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+G EN HYG NP S I GGSS GSA AVAA LV LG+DT G +RVPA+ CG+
Sbjct: 125 YGFVTENSHYGATRNPHDLSRIAGGSSGGSAAAVAAGLVPLTLGSDTNGSIRVPAALCGV 184
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRAR------ 246
G++P++G +S GV SLD +G AR+ + V VL + +P
Sbjct: 185 YGFKPTYGRLSRAGVFLFVSSLDHIGCFARSVRDVAAVFDVLQGADPKDPVCTHKPIQPC 244
Query: 247 -----------RLIFADDIFQLSKVPK-LKTIHVISKAIESLSGYQNPE 283
R+ A D FQ P+ L+ + +++A+ PE
Sbjct: 245 LSQLEGEIDHLRIAIAGDYFQQEAEPEALEVVATVAQALNVRQTITIPE 293
>gi|389808984|ref|ZP_10205076.1| Amidase [Rhodanobacter thiooxydans LCS2]
gi|388442258|gb|EIL98466.1| Amidase [Rhodanobacter thiooxydans LCS2]
Length = 465
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 182/388 (46%), Gaps = 23/388 (5%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A+KD FD+ G+ T G P + E A VV L +GA +GKT +DE A
Sbjct: 79 LDGIPIALKDNFDIAGWPTRVGLPGRSKPVRE---DAHVVARLRASGAVLLGKTNMDEGA 135
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G N H+G NP + GGSS G+A AVAA L A+G+D++G +R+PAS+CG+
Sbjct: 136 LGAVTNNPHFGATHNPYRHGYTAGGSSGGAAAAVAAGLAAAAVGSDSLGSIRIPASYCGV 195
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
+P+HG +S G++P ++ LD VGLLAR+A L VLLQ+ A R
Sbjct: 196 YALKPTHGEISARGLVPAARRLDAVGLLARSADDL----TVLLQVLAGYDADDARSRRRR 251
Query: 253 DIFQLSKVPKLKTIHVISKAIESLSGYQ-NPEHMNVGQYIASNVPSLKGLRAQSTSPENG 311
F L P + ++ + I L+ PE + V + + +P G R +
Sbjct: 252 VAFAL---PDWEPGNLRAGLIPDLAAVGVQPEVVEVFEAALAKLPHALGDRRTVDFADWD 308
Query: 312 TATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLE-AINTTQDNIKILYKV 370
A + + +L ++ T + + P + F R+L A + + + +V
Sbjct: 309 FARTR--RAGLLLMEAEMLGTFAADLADTGHPVSEH--FRRLLGYAAGKSAADYAVADRV 364
Query: 371 RNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVA 430
+ ++RL +LV+PT L+ D L+S S++GC V+
Sbjct: 365 LDAATLKMRRLFAQVDVLVLPTTPQGAFPLD------GPVPDSQADLTSFASLAGCPAVS 418
Query: 431 IPIGKY-NEHPISISFITYHGGDKFLLD 457
+P+G N PI + + G D LL+
Sbjct: 419 LPMGTLPNGMPIGLQMVGARGSDLRLLE 446
>gi|334145296|ref|YP_004538506.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Novosphingobium sp. PP1Y]
gi|333937180|emb|CCA90539.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Novosphingobium sp. PP1Y]
Length = 490
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 97/155 (62%), Gaps = 1/155 (0%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
A +PLAG+ FA K++FDV G+ T G+ RD A RTA V++ L GAT +G T +
Sbjct: 90 ADRPLAGMPFAAKNLFDVAGHPTLAGA-RINRDAPPARRTATVISRLANAGATLVGMTNM 148
Query: 129 DEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPAS 188
DEFA+G EN H+G NP + + GGSS GSA AVAA +V ALG+DT G +RVPAS
Sbjct: 149 DEFAYGFATENAHFGATRNPCDETRMAGGSSGGSAAAVAAGIVPVALGSDTNGSIRVPAS 208
Query: 189 FCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
CGI G +P+ G +S G P SLD VG AR
Sbjct: 209 LCGIYGLKPTFGRLSRAGTYPFVSSLDHVGPFART 243
>gi|307354070|ref|YP_003895121.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Methanoplanus
petrolearius DSM 11571]
gi|307157303|gb|ADN36683.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanoplanus
petrolearius DSM 11571]
Length = 434
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 189/408 (46%), Gaps = 35/408 (8%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L+G+ A+KD KG T GS + + A VV +L K GA +GKT +DEF
Sbjct: 31 LSGIPVAVKDNISTKGIETTAGSKILQ--GYIPPYDAHVVAMLKKEGAAIVGKTNMDEFG 88
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G T EN +G NP P+ +PGGSS GSA A+A+ +V ALG+DT G +R PASFCGI
Sbjct: 89 MGTTTENSAFGPTTNPCDPTRVPGGSSGGSAAAIASGMVPMALGSDTGGSIRCPASFCGI 148
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARN---ASILHRVGHVLLQLNAV--------- 240
+G +P++G VS G++ S SL+ +G +A++ S L ++ V + ++
Sbjct: 149 VGLKPTYGRVSRYGLIAYSNSLEQIGPMAKDVSGVSTLMKIISVPDEFDSTAYHNQYNHD 208
Query: 241 ---EPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPS 297
E + +++ + F + + I AI L E + + + ++PS
Sbjct: 209 PDPESIKGKKIGIPSEYF--GEGVDERVAEKIRDAIGVL------EELGA-ETVECSIPS 259
Query: 298 LKGLRAQS--TSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLE 355
+ A T ++ L + + + +EE+ G V R++
Sbjct: 260 MSYALAAYYVTCTSEASSNLSRFDGIRFGPKVDAKRRWHEEFRDFRGEYFGEEVIRRIML 319
Query: 356 AINTTQDNIKILYKVRNE-----MRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEF 410
Y + + +R R+LK+ +L PT+ + KL +K+ E
Sbjct: 320 GTFALSAGYYGKYYAKAQVAKQNVRKDFLRVLKEVDVLAGPTMPNIAYKLG-EKSDPLEM 378
Query: 411 HDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDT 458
+ + +L+ +++G +++P GK P+ + I H D+ ++DT
Sbjct: 379 Y-LSDILTVPANLAGVPAISVPCGKVENMPVGLQIIGKHFDDETVIDT 425
>gi|448532669|ref|XP_003870480.1| Her2 protein [Candida orthopsilosis Co 90-125]
gi|380354835|emb|CCG24351.1| Her2 protein [Candida orthopsilosis]
Length = 449
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 102/163 (62%), Gaps = 2/163 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL+ +A+KD K ++T S ++++ A V LL NGATCIGK LDEF
Sbjct: 33 PLSNTTYALKDNIVTKDFLTTAASHALY--NYQSPFDATVAKLLSDNGATCIGKANLDEF 90
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
G + N +YG VNP +PGGSS GSA AVA + F++GTDT G +R+PAS+C
Sbjct: 91 GMGSSNLNSYYGAVVNPFNEQAVPGGSSGGSAAAVAGNIASFSIGTDTGGSIRLPASYCN 150
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL 234
+ G++P++G +S GV+ +Q+LDTVG+++ N ++ +V VL
Sbjct: 151 VFGFKPTYGRISRWGVISYAQTLDTVGIISNNIDLVEKVYDVL 193
>gi|313681260|ref|YP_004058998.1| allophanate hydrolase [Sulfuricurvum kujiense DSM 16994]
gi|313154120|gb|ADR32798.1| allophanate hydrolase [Sulfuricurvum kujiense DSM 16994]
Length = 582
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/379 (30%), Positives = 176/379 (46%), Gaps = 34/379 (8%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
A PL G+ FA+KD D+ G T G ++ + A VV L++ GA IGKT L
Sbjct: 63 ASLPLYGVPFAVKDNIDIAGMNTTAGCAEFS---YLPSEHAFVVKQLIEAGAIPIGKTNL 119
Query: 129 DEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPAS 188
D+FA G+ G YG +N P ++ GGSSSGSA+AV A +V F+LGTDT G RVPA+
Sbjct: 120 DQFASGLVGTRSPYGEGINLFNPDYVSGGSSSGSALAVTAGIVPFSLGTDTAGSGRVPAA 179
Query: 189 FCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRL 248
F I+G +P+ G +S+ GV+P +SLD V + A+N RV + +
Sbjct: 180 FGNIVGLKPTRGALSIRGVVPACKSLDCVAIFAQNCEDAGRVYDLC------------GI 227
Query: 249 IFADDIFQLSK---VPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQ- 304
+ +D F SK +P T E L + N + ++ + SL G+R +
Sbjct: 228 VDDEDSFSRSKSCIIPFGGTFRFGVPREEQLEFFGNSAYESLFWESVKKLESLGGIRCEI 287
Query: 305 STSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNI 364
SP TA L L +RY + + A + + + A + D
Sbjct: 288 DFSPFIETAKL--LYHGPWIAERYCGIKSFADTQSDAMLDVTRGII--LSGAKPSAMDAF 343
Query: 365 KILYKVRNEMRAALQRLLKDDKILVIPT---------VSDPPLKLNTKKTYSAEFHDRTL 415
+ Y++ +E++ R++ +++ PT + + PL LNT Y F + L
Sbjct: 344 EGFYRL-SELKKISDRIMDSVDMIMTPTAGTIYRRDEIREQPLALNTNLGYYTNFMN-LL 401
Query: 416 VLSSIGSMSGCCQVAIPIG 434
LS+ +G +P G
Sbjct: 402 DLSACAVPAGFTSEGLPFG 420
>gi|424779211|ref|ZP_18206142.1| amidase [Alcaligenes sp. HPC1271]
gi|422885936|gb|EKU28369.1| amidase [Alcaligenes sp. HPC1271]
Length = 388
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/163 (49%), Positives = 99/163 (60%), Gaps = 8/163 (4%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAGL F +KDV DV+G T +G+ + AER A V LL + GA +GKTV EF
Sbjct: 35 PLAGLSFGVKDVLDVQGMPTCYGA--HFPNALPAERDAACVALLRQAGAIALGKTVTAEF 92
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+ G + NP H PGGSSSGSA AVAA +VDFALGT T G + PA+F G
Sbjct: 93 AYAAPGPTR------NPLNLEHTPGGSSSGSAAAVAAGMVDFALGTQTGGSMMRPAAFTG 146
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL 234
ILG++PS G V G+ SLDT+G +R+ S+L RV VL
Sbjct: 147 ILGFKPSFGAVHRSGLFLLCDSLDTIGYFSRDLSVLRRVATVL 189
>gi|254428707|ref|ZP_05042414.1| allophanate hydrolase [Alcanivorax sp. DG881]
gi|196194876|gb|EDX89835.1| allophanate hydrolase [Alcanivorax sp. DG881]
Length = 599
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 97/167 (58%), Gaps = 3/167 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ FA+KD DV G T PD+ + E A V LL K GA +GKT LD+F
Sbjct: 61 PLYGIPFAVKDNIDVAGMPTTAACPDFA---YTPEADATAVRLLRKAGAIVVGKTNLDQF 117
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G+ G YG NP P ++ GGSSSGSA AV+ LV F+LGTDT G RVPA+F
Sbjct: 118 ATGLVGTRSPYGEVPNPFNPDYLSGGSSSGSATAVSLGLVPFSLGTDTAGSGRVPAAFTN 177
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLN 238
+G +P+ G +S GV+P ++LD V + A + +V V+ Q +
Sbjct: 178 TVGLKPTRGAISTHGVVPACRTLDCVSIFALSVDDAQQVYRVIGQFD 224
>gi|354594428|ref|ZP_09012467.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Commensalibacter intestini A911]
gi|353672104|gb|EHD13804.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Commensalibacter intestini A911]
Length = 449
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 101/166 (60%), Gaps = 1/166 (0%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ F +KD+FDVKG VT GS +++ A + A V+ L GA + +DEF
Sbjct: 66 PLVGVPFGVKDLFDVKGEVTTAGSKLLSQNN-PANQDAKVIQRLCAAGAIPVATLNMDEF 124
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+G +N+H+G NP S GGSS GSA +V ++ F+LG+DT G +RVPASFCG
Sbjct: 125 AYGFVTDNEHHGMTHNPHDFSRFAGGSSGGSAASVGGGILSFSLGSDTNGSIRVPASFCG 184
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQL 237
+ G RP++G + M GV P ++S D +G ++ L V +V+ ++
Sbjct: 185 VWGIRPTYGVLPMQGVYPFAESFDRIGPFCQSIEDLKTVFNVMAEV 230
>gi|345005379|ref|YP_004808232.1| amidase [halophilic archaeon DL31]
gi|344321005|gb|AEN05859.1| Amidase [halophilic archaeon DL31]
Length = 465
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 178/411 (43%), Gaps = 43/411 (10%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSP--DWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
PLA L A+K+ V G + G+ W R AVVV L G +G T +D
Sbjct: 59 PLADLSLAVKENIAVGGVQSTCGTDCFSWT-----PARDAVVVERLRAAGGAVVGTTDMD 113
Query: 130 EFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
FAFG TGE G P NP H+PGGSSSGSA AVA + VD ALGTDT G VR+PA+F
Sbjct: 114 PFAFGTTGEWSARGAPENPAAAGHVPGGSSSGSAAAVAGRDVDAALGTDTAGSVRIPAAF 173
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRR---AR 246
CG++G++P++G V GV+ S S D VG+L R V + P
Sbjct: 174 CGVVGFKPTYGLVPAEGVVDLSPSNDHVGVLGREVKTTALVFEAVAGRELTRPETLAGPT 233
Query: 247 RLIFADDIFQLSKVPKLKT------IHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKG 300
RL F DI + P+L+ + V +A+E+ + Q + + + L
Sbjct: 234 RLSFTADIER--PPPRLRVGIPEEFMAVADQAVEA----------RIEQALTTCLTELDA 281
Query: 301 LRAQSTSPENGTATLKALSSVMLS----LQRYE-FKTIYEEWVKSAKPRLGY---NVFER 352
+ PE A + ++ L+R + T + +++A R + ER
Sbjct: 282 ETTDVSFPEAEAAVTANDAQTLIEFADLLERGQPLGTGRDAGMRAALRRANGRLDELPER 341
Query: 353 VLEAINTTQ-------DNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKT 405
V I T + D + + R Q L + +L +PT P ++
Sbjct: 342 VASGIRTGRGLLESAPDAYGLTWDARRRAIRRQQALFAEVDVLAMPTTPMPAPEIGAVPG 401
Query: 406 YSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
T+ ++ + +G V +P G+ P+ + + G D FLL
Sbjct: 402 DGGPAVLDTVHNTAPFNTTGAPAVTVPCGEVGGRPVGLQLVAPAGADGFLL 452
>gi|422297315|ref|ZP_16384953.1| amidase [Pseudomonas avellanae BPIC 631]
gi|407991320|gb|EKG33208.1| amidase [Pseudomonas avellanae BPIC 631]
Length = 601
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 125/426 (29%), Positives = 183/426 (42%), Gaps = 97/426 (22%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ FA+KD FDV G +T P + + A A VV LLL +GA IGKT LD+F
Sbjct: 72 PLFGVPFAVKDNFDVAGMLTTAACPAFA---YTARENAHVVQLLLDSGALLIGKTNLDQF 128
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G+ G YG N P+++ GGSSSGSAVAVA V FALGTDT G RVPA F G
Sbjct: 129 ATGLVGVRSPYGAVRNAHDPAYVSGGSSSGSAVAVARGYVSFALGTDTAGSGRVPAGFNG 188
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP--------- 242
I+G +PS G S GV+P ++LD + A + +V V+ + ++P
Sbjct: 189 IVGLKPSLGLFSSRGVVPACRTLDCPSIFATDVMQAWQVAQVIAAYDPLDPGSVAVQALP 248
Query: 243 --RRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKG 300
RRA+R+ A + E Q A+ +L
Sbjct: 249 VQRRAKRVAVA----------------------------RQCEFFGDTQAQAAYSKALAA 280
Query: 301 LRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEE--------WVKSAKPRLG------ 346
LR + +++L+ EF E WV + +G
Sbjct: 281 LR----------------NDPLVTLKEIEFDVFVEAAALLYQGPWVAERRAAVGRVFTEN 324
Query: 347 ----YNVFERVLEAINTTQ--DNIKILYKVRNEMRAALQRLLKDDKILVIPT-------- 392
+ V +L++ + D Y++ + RAA + LL D +LV+PT
Sbjct: 325 AADVHPVVRGILQSAASFDAVDAFNARYRLADLTRAA-ENLLADVDVLVVPTAPCMPTIN 383
Query: 393 -VSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGG 451
V + P++LN++ Y F + M+ C I + + P I+ I G
Sbjct: 384 AVLENPIELNSRLGYYTNF---------VNLMNMCAIAIPAIARADGLPAGITLIGPAGA 434
Query: 452 DKFLLD 457
D+ L +
Sbjct: 435 DQRLAE 440
>gi|170742737|ref|YP_001771392.1| amidase [Methylobacterium sp. 4-46]
gi|168197011|gb|ACA18958.1| Amidase [Methylobacterium sp. 4-46]
Length = 473
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 109/173 (63%), Gaps = 4/173 (2%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ A+KD+ DV+G ++ GS R A +A V ++ G +GKT EF
Sbjct: 83 PLHGVPVALKDLIDVEGRISTGGS--MTRRVQRATASATVAKRMIAQGMILLGKTHTVEF 140
Query: 132 AFGITGENKHYGTPVNPQMPSH--IPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
AFG G N+H GTP+NP P+ +PGGSSSGS VAVA+++ +A+GTDT G VR+PASF
Sbjct: 141 AFGGWGTNQHMGTPLNPWDPARPRVPGGSSSGSGVAVASRMAPWAIGTDTGGSVRLPASF 200
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
CGI G + + G VS GVLP S +LDT G +AR+ + + +VL + ++P
Sbjct: 201 CGITGLKVTVGRVSTAGVLPLSTTLDTPGPMARSVEDVALLYNVLQGPDPLDP 253
>gi|148553669|ref|YP_001261251.1| amidase [Sphingomonas wittichii RW1]
gi|148498859|gb|ABQ67113.1| Amidase [Sphingomonas wittichii RW1]
Length = 382
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 103/174 (59%), Gaps = 14/174 (8%)
Query: 52 FLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVV 111
F+ERFEL AG A+KD D+ G T GS + + A A V
Sbjct: 19 FVERFEL-------------GGAGPTVAVKDCIDIAGKRTSVGS-EALSEAPPAAAHAAV 64
Query: 112 VTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLV 171
V L+ GA +GKT + EFA+G+TG N+ GTPVNP P IPGGSSSGSA AVAA LV
Sbjct: 65 VAALIAGGARIVGKTNMHEFAYGVTGVNRWLGTPVNPNYPGLIPGGSSSGSAAAVAAGLV 124
Query: 172 DFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNAS 225
+ A+GTDT G +R+PA+ CG+ G +PS G VS G +P SLD VG AR+ +
Sbjct: 125 EIAIGTDTGGSIRMPATCCGVFGLKPSFGRVSREGCIPADSSLDCVGPFARDVA 178
>gi|110835367|ref|YP_694226.1| allophanate hydrolase [Alcanivorax borkumensis SK2]
gi|110648478|emb|CAL17954.1| amidase family protein, putative [Alcanivorax borkumensis SK2]
Length = 599
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 102/180 (56%), Gaps = 5/180 (2%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ FA+KD DV G T P + + A VV LL GA +GKT LD+F
Sbjct: 61 PLYGIPFAVKDNIDVVGMPTTAACPAFA---YTPTEDATVVRLLRDAGAIVVGKTNLDQF 117
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G+ G YG NP P ++ GGSSSGSA AV+ LV F+LGTDT G RVPA+F
Sbjct: 118 ATGLVGTRSPYGEVPNPFNPDYLSGGSSSGSATAVSLGLVPFSLGTDTAGSGRVPAAFTN 177
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP--RRARRLI 249
+G +P+ G +S GV+P ++LD V + A N + ++ Q ++ +P R A RL+
Sbjct: 178 TVGLKPTRGAISTHGVVPACRTLDCVSIFALNVDDAQEIFRLISQFDSADPYSRAAPRLL 237
>gi|220924666|ref|YP_002499968.1| amidase [Methylobacterium nodulans ORS 2060]
gi|219949273|gb|ACL59665.1| Amidase [Methylobacterium nodulans ORS 2060]
Length = 468
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 121/422 (28%), Positives = 202/422 (47%), Gaps = 45/422 (10%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ A+KD+ D++G +T GS + + A TA +V L+ G +GKT EF
Sbjct: 78 PLHGVPVAVKDLIDIEGRITTGGSMTMR--NRRATATATIVRRLIAQGMILLGKTHTVEF 135
Query: 132 AFGITGENKHYGTPVNPQMPSH--IPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
AFG G N+ GTP NP P+H PGGSSSGS VAVA++L +A+GTDT G VR+PASF
Sbjct: 136 AFGGWGTNQRMGTPRNPWDPAHPRTPGGSSSGSGVAVASRLAPWAIGTDTGGSVRLPASF 195
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
CGI G + + G VS GVLP S +LDT G +AR+ V V L N ++
Sbjct: 196 CGITGLKVTVGRVSTHGVLPLSTTLDTPGPMARS------VEDVALLFNVIQ-------- 241
Query: 250 FADDIFQLSK-VPKLKTIHVISKAIESLSGYQNPEHMNVG---QYIASNVPSLKGLRAQS 305
D + +++ + + + V+ + + L + P G +A+ +L+ L
Sbjct: 242 GPDPLDPITRGIAPVDPMPVLERGVRGLRLGRMPAAEREGCAADVLAAYDRALELLDRAG 301
Query: 306 TSPENGTATLKAL-----SSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTT 360
+ + + ++++ + + I E++ A P L +V R+L +
Sbjct: 302 AEIVDIQLPFRFVDFVNAAAILQAEAYFHNGAIAEDF---AAP-LDEDVRARILSGAAVS 357
Query: 361 QDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNT--KKTYSAEFHDRTLVLS 418
+ +++ +MR A R + L+ PT ++L+ + + F +
Sbjct: 358 ARDYLRTRRLQQDMRRAFDRAMSGLDALLTPTTETAAIRLDAVDQAVMPSRF-------T 410
Query: 419 SIGSMSGCCQVAIPIGKYNEH-PISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNLV 477
G+ C +A+P G E P+S+ + GGD+ + L + + Q+ + + L
Sbjct: 411 RFGNFLELCALALPNGFSAEGLPLSLQVVC-RGGDEPM---ALRIGQAYQQATDWHTRLP 466
Query: 478 PL 479
P+
Sbjct: 467 PV 468
>gi|410644515|ref|ZP_11354995.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Glaciecola agarilytica NO2]
gi|410135938|dbj|GAC03394.1| aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
[Glaciecola agarilytica NO2]
Length = 448
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 126/447 (28%), Positives = 198/447 (44%), Gaps = 79/447 (17%)
Query: 37 RRRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSP 96
+R NPK+N AFL+ +P P G+ +KD DVKG+ T G
Sbjct: 36 QRVNPKIN------AFLQ--TALPKCAPQEKRTGSVFQGICVGVKDNIDVKGFATTAGMA 87
Query: 97 DWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPG 156
R +A++ A V+ L + GA IGK + E A G T +N+H+G NP + PG
Sbjct: 88 --TRIGRQAKQDAFVINRLRQTGAQFIGKLNMHEGALGATNQNEHFGDCHNPHKHGYTPG 145
Query: 157 GSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDT 216
GSS GSA AVA+ +V +LGTDT+G VR+PA++CGI G++PS G VS G + S+ +D
Sbjct: 146 GSSGGSAAAVASGMVGLSLGTDTMGSVRIPAAYCGIFGFKPSRGAVSNHGSVTCSRVMDN 205
Query: 217 VGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESL 276
+G +AR+A L V + A + A + F KAI+
Sbjct: 206 IGPMARSAKDLTLAISV---MKAFDESCAASIDF--------------------KAIDCF 242
Query: 277 SGYQNPEHMNVGQYIASNVP-SLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYE 335
+ N + VP +L+GL S + +A L A + + +L+ ++F
Sbjct: 243 TAPDNKVLL---------VPENLEGLGVSSDIAADFSANLSAFTDLGYTLEYFDFS---- 289
Query: 336 EWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNEMRAAL--------------QRL 381
++ +A R G + E + + +D + K MR L +R+
Sbjct: 290 DYDFAAARRAGLLLCEADMR-VEHQEDWLNQPQKFSEYMRGMLSYIERKTPMDMMQSERV 348
Query: 382 LKDDKI-----------LVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVA 430
L + KI +++PTV L ++S L+S + +G V+
Sbjct: 349 LDNAKIFARQLFKQGCAILMPTV------LQRAFSFSQPVPANQADLTSFANQAGLPAVS 402
Query: 431 IPIGKYNEHPISISFITYHGGDKFLLD 457
+P+ N P + + G D LLD
Sbjct: 403 LPMLGDNILPAGMQIVGPLGSDNQLLD 429
>gi|388582493|gb|EIM22798.1| amidase signature enzyme [Wallemia sebi CBS 633.66]
Length = 417
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 97/165 (58%), Gaps = 2/165 (1%)
Query: 78 FAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITG 137
A+KDVF K T S + H E + A V L GA+ IGKT DEF G +
Sbjct: 1 MAVKDVFWTKELPTTAASKMLRNFHPEED--AECVQLARAAGASFIGKTNCDEFGMGSSN 58
Query: 138 ENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRP 197
+G ++P P + GGSS GSA AVA Q DFAL TDT G R+PAS+CG++G +P
Sbjct: 59 RYSDFGPVLHPFSPERLAGGSSGGSAAAVALQECDFALSTDTGGSTRLPASYCGVVGLKP 118
Query: 198 SHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
S+G +S G++P ++SLD VG++AR I+ RV VL Q + +P
Sbjct: 119 SYGMISRYGMIPYAESLDCVGIMARKVGIVKRVFEVLSQYDEKDP 163
>gi|422587197|ref|ZP_16661868.1| allophanate hydrolase [Pseudomonas syringae pv. morsprunorum str.
M302280]
gi|330872959|gb|EGH07108.1| allophanate hydrolase [Pseudomonas syringae pv. morsprunorum str.
M302280]
Length = 601
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 125/426 (29%), Positives = 183/426 (42%), Gaps = 97/426 (22%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ FA+KD FDV G +T P + + A A VV LLL +GA IGKT LD+F
Sbjct: 72 PLFGVPFAVKDNFDVAGMLTTAACPAFA---YTARENAHVVQLLLDSGALLIGKTNLDQF 128
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G+ G YG N P+++ GGSSSGSAVAVA V FALGTDT G RVPA F G
Sbjct: 129 ATGLVGVRSPYGAVRNAHDPAYVSGGSSSGSAVAVARGYVSFALGTDTAGSGRVPAGFNG 188
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP--------- 242
I+G +PS G S GV+P ++LD + A + +V V+ + ++P
Sbjct: 189 IVGLKPSLGLFSSRGVVPACRTLDCPSIFATDVMQAWQVAQVIAAYDPLDPGSVAVQALP 248
Query: 243 --RRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKG 300
RRA+R+ A + E Q A+ +L
Sbjct: 249 VQRRAKRVAVA----------------------------RQCEFFGDTQAQAAYSKALAA 280
Query: 301 LRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEE--------WVKSAKPRLG------ 346
LR + +++L+ EF E WV + +G
Sbjct: 281 LR----------------NDPLVTLKEIEFDVFVEAAALLYQGPWVAERRAAVGRFFTEN 324
Query: 347 ----YNVFERVLEAINTTQ--DNIKILYKVRNEMRAALQRLLKDDKILVIPT-------- 392
+ V +L++ + D Y++ + RAA + LL D +LV+PT
Sbjct: 325 AADVHPVVRGILQSAASFDAVDAFNARYRLADLTRAA-ENLLADVDVLVVPTAPCMPTIN 383
Query: 393 -VSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGG 451
V + P++LN++ Y F + M+ C I + + P I+ I G
Sbjct: 384 AVLENPIELNSRLGYYTNF---------VNLMNMCAIAIPAIARADGLPAGITLIGPAGA 434
Query: 452 DKFLLD 457
D+ L +
Sbjct: 435 DQRLAE 440
>gi|453330023|dbj|GAC88001.1| amidase [Gluconobacter thailandicus NBRC 3255]
Length = 444
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 96/169 (56%), Gaps = 3/169 (1%)
Query: 70 RQP--LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
R P LAG+ F IKD+FDV G VT GS D A R A +V L+ GA + T
Sbjct: 66 RDPGVLAGVPFGIKDLFDVAGQVTTAGSKVLANDP-PATRDAALVARLIDAGAIPVALTN 124
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
+DEFA+G +N H+G NP P H+ GGSS GSA VAA+L LG+DT G +RVPA
Sbjct: 125 MDEFAYGFATDNAHHGVTRNPHAPDHLAGGSSGGSAAGVAARLFSLGLGSDTNGSIRVPA 184
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ 236
S CGI G R + G + + G P SLDTVG A +A L L+Q
Sbjct: 185 SLCGIWGLRATQGRLPIEGSYPFVASLDTVGPFADSAGGLRACFEALVQ 233
>gi|54297650|ref|YP_124019.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Legionella
pneumophila str. Paris]
gi|81601798|sp|Q5X4H5.1|GATA_LEGPA RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A;
Short=Glu-ADT subunit A
gi|53751435|emb|CAH12853.1| Glutamyl-tRNA(Gln) amidotransferase (subunit A) [Legionella
pneumophila str. Paris]
Length = 483
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 178/407 (43%), Gaps = 30/407 (7%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
+PL G+ A+KD+F K T S + +A A +VT +NGA IGKT +DE
Sbjct: 65 KPLTGIPMALKDLFCTKRLNTTCASKMLA--NFQAPYDATIVTKFKQNGAIIIGKTNMDE 122
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FA G + EN ++G+ NP +PGGSS GSA AVA LV FA+G+DT G +R PA+FC
Sbjct: 123 FAMGSSNENSYFGSVKNPWDRERVPGGSSGGSAAAVAGNLVPFAIGSDTGGSIRQPAAFC 182
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIF 250
GI G +P++G VS G++ + SLD G A++A L + H + ++ + R+I
Sbjct: 183 GISGIKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAMILHCIAGFDSKDSTSVDRVI- 241
Query: 251 ADDIFQLSK--------VPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLR 302
D ++ K +P + K I+ N+G I L+
Sbjct: 242 PDYSAEIKKPVDKIRIGLPSCFFQPQVEKGIQDAIHNAVKLFENLGAEIIEIDLKLQPFW 301
Query: 303 AQS---TSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINT 359
+ ++ L + + T+ E S G V R+L +
Sbjct: 302 VPCYYVIACAEASSNLSRYDGIRFGHRSKSASTLIELITNSRSEGFGNEVKRRILTGTHV 361
Query: 360 TQDNIKILY-----KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTK-----KTYSAE 409
Y KVR +R L L +++ PT KL K + Y A+
Sbjct: 362 LSSGFFDAYYLHAQKVRRLIRDELITTLNSVDVILGPTTPTTAFKLGEKINDPIQNYLAD 421
Query: 410 FHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
V + +++G ++IP G N+ PI + + H + LL
Sbjct: 422 ------VFTVAANLAGLPAISIPTGFENKLPIGLQLMGKHFSESRLL 462
>gi|352681239|ref|YP_004891763.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase subunit A [Thermoproteus
tenax Kra 1]
gi|350274038|emb|CCC80683.1| Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit [Thermoproteus
tenax Kra 1]
Length = 412
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 102/174 (58%), Gaps = 3/174 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A+KD DV G T G+P + R+ E TA +VT L + GA +GKT + E A
Sbjct: 58 LLGVVVAVKDNIDVAGLPTTNGAP-YAREVPEL--TAPIVTALEEEGALVLGKTNMHELA 114
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G T N H+G +NP+ PS I GGSS GSA AVA + ALGTDT G VR+PAS CG+
Sbjct: 115 LGATNVNPHFGPTLNPRDPSRITGGSSGGSAGAVALGIAHIALGTDTGGSVRIPASLCGV 174
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRAR 246
+GY+P +G +S+ GV P + SLD +G L + VL L A P R R
Sbjct: 175 VGYKPPYGALSLEGVRPLAPSLDHLGFFTSTVKDLVYLMSVLRGLRAEPPPRFR 228
>gi|311743177|ref|ZP_07716985.1| probable glutamyl-tRNA(Gln) amidotransferase, subunit A
[Aeromicrobium marinum DSM 15272]
gi|311313857|gb|EFQ83766.1| probable glutamyl-tRNA(Gln) amidotransferase, subunit A
[Aeromicrobium marinum DSM 15272]
Length = 405
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 120/430 (27%), Positives = 184/430 (42%), Gaps = 55/430 (12%)
Query: 32 AETLRRRRNPKLNGRVD----FGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVK 87
A LR R+ + VD G F R + PP AR PL G+ A+ D+ V
Sbjct: 7 ARPLRGGRHARDQSAVDDEATAGGFDRRVWRVVGDPLVPPTARGPLDGMALAVSDMVAVA 66
Query: 88 GYVTGFGSPDWKRDHHEAERT--AVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTP 145
G G G P R A T A VV LL GA+ G +DE +TG N H G
Sbjct: 67 GQRRGLGHP--VRVATSAPETDHAPVVASLLAAGASVRGIAQIDELGNALTGTNPHVGAT 124
Query: 146 VNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMI 205
NP+ P + GG++ G+A AVA LGTDT+GC+RVPA++ G+ RP+ G V
Sbjct: 125 TNPRAPDRLAGGANCGAAAAVALGHAQVGLGTDTVGCLRVPAAYQGLWSMRPTQGVVDAS 184
Query: 206 GVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKT 265
G S S DTVG + L RVG LL D+ +S +
Sbjct: 185 GATNLSPSFDTVGWVTAGVESLARVGATLLPA---------------DVATVSGL----- 224
Query: 266 IHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSL 325
V+ AI + + Q E ++ P++ GL + A L A +V+ +
Sbjct: 225 --VVDPAILAAADDQVREVLD---------PAMVGLEHWDSGLLATDAALHAFQTVVAA- 272
Query: 326 QRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINT----TQDNIKILYKVRNEMRAALQRL 381
E ++ WV+ +G +V R A + T+ + + + + R+ +R AL
Sbjct: 273 ---EAWQVHGRWVEEHADAIGADVGARFRHAASVDPVWTRRSTEQVAEWRHLIRTALA-- 327
Query: 382 LKDDKILVIPTVSD-PPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHP 440
+++LV+PT PL + + T+ L+ + + G V++P+ P
Sbjct: 328 ---EQVLVVPTAPTVAPLVRDAD--HLPALRRATIRLTCLAGLGGLPTVSVPLSTTAGVP 382
Query: 441 ISISFITYHG 450
+ +S + G
Sbjct: 383 VGLSLVGPAG 392
>gi|257388040|ref|YP_003177813.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Halomicrobium
mukohataei DSM 12286]
gi|257170347|gb|ACV48106.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Halomicrobium
mukohataei DSM 12286]
Length = 426
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 87/154 (56%), Gaps = 2/154 (1%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
A PLAG A+KD KG T GS + A VV L GAT GKT
Sbjct: 17 ADEGPLAGQTVAVKDNISTKGVQTTCGSS--MLAGYVPPYDATVVERLTAAGATVPGKTN 74
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
+DEF G T E YG NP P H+PGGSS GSA VAA D ALGTDT G +R PA
Sbjct: 75 MDEFGMGTTTETSAYGPVENPAAPGHVPGGSSGGSAAVVAAGDADMALGTDTGGSIRCPA 134
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLA 221
+FCG++G +P++G VS G++ + SL+ +G +A
Sbjct: 135 AFCGVVGIKPTYGLVSRYGLVAYANSLEQIGPIA 168
>gi|414341820|ref|YP_006983341.1| amidase [Gluconobacter oxydans H24]
gi|411027155|gb|AFW00410.1| amidase [Gluconobacter oxydans H24]
Length = 444
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 94/164 (57%), Gaps = 1/164 (0%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAG+ F IKD+FDV G VT GS D A R A +V L+ GA + T +DEFA
Sbjct: 71 LAGVPFGIKDLFDVAGQVTTAGSKVLANDP-PATRDAALVARLIDAGAIPVALTNMDEFA 129
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+G +N H+G NP P H+ GGSS GSA VAA+L LG+DT G +RVPAS CGI
Sbjct: 130 YGFATDNAHHGVTRNPHAPDHLAGGSSGGSAAGVAARLFSLGLGSDTNGSIRVPASLCGI 189
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ 236
G R + G + + G P SLDTVG A +A L L+Q
Sbjct: 190 WGLRATQGRLPVEGSYPFVASLDTVGPFADSAGGLRACFEALVQ 233
>gi|433605728|ref|YP_007038097.1| putative indoleacetamide hydrolase [Saccharothrix espanaensis DSM
44229]
gi|407883581|emb|CCH31224.1| putative indoleacetamide hydrolase [Saccharothrix espanaensis DSM
44229]
Length = 444
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 93/151 (61%), Gaps = 2/151 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ F++KD DV+G T GSP D A A VV+ L GA +GKT L E
Sbjct: 56 PLAGVPFSVKDNVDVRGVPTTAGSP--LLDDSPAAVDATVVSALRAAGAVVVGKTNLHEL 113
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
AFGIT NK +G NP P GGSS GSAV VA +V FALGTDT G V VPASFCG
Sbjct: 114 AFGITSNNKAFGPVRNPADPDRSAGGSSGGSAVGVALGVVPFALGTDTGGSVTVPASFCG 173
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLAR 222
++G+RPS G GV+ S S DT+G+ AR
Sbjct: 174 VVGFRPSTGRYPGDGVVNLSTSRDTIGVHAR 204
>gi|148657191|ref|YP_001277396.1| amidase [Roseiflexus sp. RS-1]
gi|148569301|gb|ABQ91446.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
[Roseiflexus sp. RS-1]
Length = 463
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 161/323 (49%), Gaps = 13/323 (4%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R PL G+ A+KD++D G T GS + + A VTLL + GA +GK +
Sbjct: 69 RGPLHGIPLALKDLYDTAGIRTTAGSTFFA--DRVPDTDARAVTLLYQAGAVLLGKLNMH 126
Query: 130 EFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
E+A G+T N HYG NP PS I GGSS G+A A+AA L ALG+DT G +R+PAS
Sbjct: 127 EWALGVTNINPHYGPSRNPWDPSRITGGSSGGAAAALAAGLCMGALGSDTGGSIRIPASL 186
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ-LNAVEPRRARRL 248
CGI+G +P+ G VS+ GV+P S +LD G +AR + +LLQ + +P +
Sbjct: 187 CGIVGLKPTFGRVSLQGVIPLSWNLDHAGPMARTVTD----AALLLQAIAGYDPDDPVSV 242
Query: 249 IFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSP 308
D L+ + T I+ A ++ G +PE ++ + A+ L G R ++
Sbjct: 243 ALPVDNL-LATLDAGVTGWRIALATDAHFGEADPEVISAVRRAATVFEEL-GARVEAVDL 300
Query: 309 ENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILY 368
G + ++++M + F + + ++ R G +V R+ T +
Sbjct: 301 SQGREAAQ-MNALMTTSDAAAF---HRDRLRDHPHRFGADVLARMERGAQFTSTEYILAR 356
Query: 369 KVRNEMRAALQRLLKDDKILVIP 391
+ ++E R L+RL +L+ P
Sbjct: 357 RFQSEWRRRLERLFDQFDLLLTP 379
>gi|349699919|ref|ZP_08901548.1| amidase [Gluconacetobacter europaeus LMG 18494]
Length = 457
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 98/159 (61%), Gaps = 1/159 (0%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ F +KD+FDV+G VT GS RD+ A R AVVV L GA + +DEF
Sbjct: 73 PLAGVPFGVKDLFDVRGEVTTAGS-IVLRDNLPATRDAVVVERLRAAGAVPVATLNMDEF 131
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+G + EN H GT NP + + GGSS GSA +VAA L+ F LG+DT G +R+P+S CG
Sbjct: 132 AYGFSTENAHTGTTRNPHDTARLAGGSSGGSAASVAAGLLPFTLGSDTNGSIRIPSSLCG 191
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRV 230
+ G +P++G + + GV P SLD VG +A L V
Sbjct: 192 VWGLKPTYGQMPLGGVYPFVASLDVVGPMADTVEDLRAV 230
>gi|389776656|ref|ZP_10194087.1| Amidase [Rhodanobacter spathiphylli B39]
gi|388436458|gb|EIL93322.1| Amidase [Rhodanobacter spathiphylli B39]
Length = 465
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 185/388 (47%), Gaps = 23/388 (5%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ A+KD FD+ G+ T G P + E A VV L +GA +GKT +DE A
Sbjct: 79 LDGIPLAVKDNFDIAGWPTRVGLPGRGKPVQE---DAHVVARLRASGALLVGKTNMDEGA 135
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G T +N H+G NP + GGSS G+A AVAA L A+G+D++G +R+PAS+CG+
Sbjct: 136 LGATTDNPHFGATHNPHRHGYTAGGSSGGAAAAVAAGLAVAAVGSDSLGSIRIPASYCGL 195
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
+P+HG +S G++P ++ LD VGLLAR+A L VLLQ+ A R
Sbjct: 196 YALKPTHGEISARGLVPAARRLDAVGLLARSADDL----TVLLQVLAGYDADDARSRRRR 251
Query: 253 DIFQLSKVPKLKTIHVISKAIESLSGYQ-NPEHMNVGQYIASNVPSLKGLRAQSTSPENG 311
F L P + ++ + + L+G PE + V + + + G R +
Sbjct: 252 VAFAL---PDWEPGNLRAGLLPDLAGVGVQPEVIEVFESALAKLSHALGDRRTVDFADWD 308
Query: 312 TATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLE-AINTTQDNIKILYKV 370
A + + +L ++ T + + +P + F ++L A + + + +V
Sbjct: 309 FARTR--RAGLLLMEAEMLGTFAADLANTERPV--SDRFRQMLGYAGRKSAADYAVADRV 364
Query: 371 RNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVA 430
+ ++RL +LV+PT L+ D L+S S++GC V+
Sbjct: 365 LDAATLKMRRLFSQVDVLVMPTTPQGAFPLD------GPVPDSQADLTSFASLAGCPAVS 418
Query: 431 IPIGKYNE-HPISISFITYHGGDKFLLD 457
+P+G + P+ + + G D LL+
Sbjct: 419 LPMGTLPDGMPVGLQLVGARGSDLRLLE 446
>gi|425898124|ref|ZP_18874715.1| indoleacetamide hydrolase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397891127|gb|EJL07605.1| indoleacetamide hydrolase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 447
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 102/184 (55%), Gaps = 6/184 (3%)
Query: 67 PAARQ-PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGK 125
P RQ PL G+ + KD +V G T G+P D+H A A +V GA GK
Sbjct: 56 PEQRQAPLYGIPVSFKDNINVSGLATTAGTPGLA-DYHPAA-DAGIVRRFRALGARVAGK 113
Query: 126 TVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
+ E +FG+T N YG VNP+ H GGSS G A AVAA LV A+GTDT G VR+
Sbjct: 114 NNMHELSFGVTSANLSYGAVVNPRHLQHSAGGSSGGCAAAVAAGLVPCAVGTDTGGSVRI 173
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLAR---NASILHRVGHVLLQLNAVEP 242
PA+FCG++G+RPS G G++P SQ+ D+ GLL R +A +HR EP
Sbjct: 174 PAAFCGVVGFRPSTGAYPGDGIVPVSQTKDSPGLLTRSLEDALFVHRHLTGASFAAPTEP 233
Query: 243 RRAR 246
+R R
Sbjct: 234 KRLR 237
>gi|410944443|ref|ZP_11376184.1| amidase [Gluconobacter frateurii NBRC 101659]
Length = 444
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 94/164 (57%), Gaps = 1/164 (0%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAG+ F IKD+FDV G VT GS D A R A +V L+ GA + T +DEFA
Sbjct: 71 LAGVPFGIKDLFDVAGQVTTAGSKVLANDP-PATRDAALVARLIDAGAIPVALTNMDEFA 129
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+G +N H+G NP P H+ GGSS GSA VAA+L LG+DT G +RVPAS CG+
Sbjct: 130 YGFATDNSHHGVTRNPHAPDHLAGGSSGGSAAGVAARLFSLGLGSDTNGSIRVPASLCGV 189
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQ 236
G R + G + + G P SLDTVG A +A L L+Q
Sbjct: 190 WGLRATQGRLPVEGSYPFVASLDTVGPFADSAGGLRACFEALVQ 233
>gi|330505114|ref|YP_004381983.1| amidase [Pseudomonas mendocina NK-01]
gi|328919400|gb|AEB60231.1| amidase [Pseudomonas mendocina NK-01]
Length = 373
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/153 (50%), Positives = 92/153 (60%), Gaps = 1/153 (0%)
Query: 75 GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFG 134
G + +KD DV G+ T S + +AER A VV +L G +GKT L E AFG
Sbjct: 17 GPRVMVKDTIDVAGHPTRASSRALEH-APDAERHADVVQAMLDAGCQLLGKTSLHELAFG 75
Query: 135 ITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILG 194
TG N GT NP+ P IPGGSSSGSA AVAA L DF+LGTDT G VR+PA+ CG+ G
Sbjct: 76 TTGLNAWIGTAENPRYPGRIPGGSSSGSAAAVAAGLCDFSLGTDTGGSVRIPAACCGVFG 135
Query: 195 YRPSHGTVSMIGVLPNSQSLDTVGLLARNASIL 227
+PS G VS GV+P SLD VG A + L
Sbjct: 136 LKPSFGRVSRAGVMPTQTSLDCVGPFAADIDTL 168
>gi|403215915|emb|CCK70413.1| hypothetical protein KNAG_0E01490 [Kazachstania naganishii CBS
8797]
Length = 472
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 118/209 (56%), Gaps = 7/209 (3%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
RR P L R + F + PP L GL A+KD K + S
Sbjct: 8 RRLPGLQSR--YNIFTHHINKVTEINDPPRGKNDALKGLLAAVKDNISTKNFGATTCSSR 65
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTP--VNP--QMPSH 153
+D+ +A A VV LL + A +GKT +DEFA G +G N G +NP + +
Sbjct: 66 MLKDY-KAPYDATVVNLLRDSRAVILGKTNMDEFAMGASGLNNGLGGGPVINPISDIEDY 124
Query: 154 IPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQS 213
PGGSSSGSA AV A LVDFALGTDT G VR+PA++ ILG++PS+G +S GV+ +QS
Sbjct: 125 CPGGSSSGSAAAVLADLVDFALGTDTGGSVRLPAAWGSILGFKPSYGRISRFGVIDFAQS 184
Query: 214 LDTVGLLARNASILHRVGHVLLQLNAVEP 242
LDTVG+LA++ IL +V VL + + +P
Sbjct: 185 LDTVGILAKDIGILRKVFSVLDKYDPRDP 213
>gi|160901696|ref|YP_001567277.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Petrotoga mobilis
SJ95]
gi|160359340|gb|ABX30954.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Petrotoga mobilis
SJ95]
Length = 453
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 191/413 (46%), Gaps = 44/413 (10%)
Query: 75 GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFG 134
G+ F +KD V+G T GS +++ + TA V LLK G T +GKT +DEFA G
Sbjct: 45 GIPFLVKDNILVEGTKTTNGSKIL--ENYNSPYTATAVERLLKAGFTVVGKTNMDEFAMG 102
Query: 135 ITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILG 194
T E+ +G NP+ + +PGGSS GSA AVAA V F+LG+DT G VR PA+FCG++G
Sbjct: 103 NTNEHSAFGPVRNPKDLARVPGGSSGGSAAAVAAGYVPFSLGSDTGGSVRQPAAFCGVVG 162
Query: 195 YRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDI 254
++PS+G +S G+ S SLD +G+ A N V + + +P+ + L D+
Sbjct: 163 FKPSYGMISRYGLTAFSSSLDQIGVFANNVKDARTVTEI---MKGKDPKDSTTLEHDKDL 219
Query: 255 FQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQY--------------IASNVPSLKG 300
+ ++ KT I K + ++N + + Q+ ++P L+
Sbjct: 220 VKDVEIDLSKTKICIPKVVY----HENADDNVIKQFERAINFLRSKGAIVDVKDIPELEY 275
Query: 301 LRA--QSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAIN 358
A +P ++ L V L R + + + + + G V R++
Sbjct: 276 SVAIYYIIAPAEASSNLSRYDGVKYGL-RNDALGLNRMYKSTREVGFGMEVKRRIMMGTF 334
Query: 359 TTQDNIKILY---------KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTK-KTYSA 408
N+ LY KVR + ++ +L D +++ PT P K+ K K
Sbjct: 335 ----NLSSLYYDQYYSKASKVRKLLSDKIKEVLNDYNLIMTPTSPVLPPKIGEKLKPLDY 390
Query: 409 EFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLD 461
D + + +++G ++IP G P I FI + D+ LL T+ D
Sbjct: 391 YLMD---IFTIPANLNGSPAISIPFGDVQGLPFGIQFIGRYMKDEELL-TIAD 439
>gi|408379022|ref|ZP_11176617.1| amidase [Agrobacterium albertimagni AOL15]
gi|407747149|gb|EKF58670.1| amidase [Agrobacterium albertimagni AOL15]
Length = 472
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 98/152 (64%), Gaps = 2/152 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G+ A KD++D KG+VTG GS R +H A T+ V+ L GA IG+ + EF
Sbjct: 71 PLHGVPLAHKDMYDRKGFVTGCGS--KIRANHVAPETSTVMQRLETAGAISIGRLNMSEF 128
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G TG N H+G +NP P++I GGSSSGS AV +V ALG+DT G +R+PA+ CG
Sbjct: 129 AMGPTGHNAHHGRALNPIDPAYITGGSSSGSGSAVGGGVVLAALGSDTGGSIRLPAACCG 188
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
++G +P+ G VS GV+P S S D VG LAR+
Sbjct: 189 VVGIKPTQGRVSRHGVMPLSFSQDCVGPLARS 220
>gi|424896435|ref|ZP_18320009.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WSM2297]
gi|393180662|gb|EJC80701.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Rhizobium leguminosarum bv. trifolii WSM2297]
Length = 446
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 98/151 (64%), Gaps = 2/151 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L G+ FA KD+F+ G +T GSP + + R+A+VVT L + GA IGK EFA
Sbjct: 69 LDGVPFAAKDMFETAGILTTGGSPVL--EDNVPGRSALVVTRLEEAGAVLIGKANQHEFA 126
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+G TGEN GT NP + + GGSS GSA AVAA +V +ALGTDT G VRVPA+ CG+
Sbjct: 127 YGATGENGWSGTTRNPFDTTRLAGGSSGGSAAAVAAGIVPYALGTDTGGSVRVPAALCGV 186
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
+G++PS G +S+ GV+P SLD G+ A N
Sbjct: 187 VGFKPSFGRMSLQGVIPYCWSLDHAGIFANN 217
>gi|410083172|ref|XP_003959164.1| hypothetical protein KAFR_0I02500 [Kazachstania africana CBS 2517]
gi|372465754|emb|CCF60029.1| hypothetical protein KAFR_0I02500 [Kazachstania africana CBS 2517]
Length = 440
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 107/169 (63%), Gaps = 5/169 (2%)
Query: 69 ARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
A+ PLAG+ AIKD K T S ++++ A VV+ L NGA IGKT +
Sbjct: 29 AKGPLAGIIAAIKDNIATKDEPTTCSS--RMLSNYQSPFDATVVSKLRANGAQIIGKTNM 86
Query: 129 DEFAFGITGENKHYGTPVNPQMPSHIP---GGSSSGSAVAVAAQLVDFALGTDTIGCVRV 185
DEF G G + ++G NP PS GGSSSGSA AV++ LVDFALGTDT G VR+
Sbjct: 87 DEFGMGSMGSHSYFGPCYNPLFPSRQKVNMGGSSSGSAAAVSSGLVDFALGTDTGGSVRL 146
Query: 186 PASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL 234
P+S+ G +G++PS+G +S GV+ +QSLDTVG+++++ S L +V VL
Sbjct: 147 PSSYGGAIGFKPSYGRISRFGVVDFAQSLDTVGIISKDVSTLCKVFKVL 195
>gi|86610086|ref|YP_478848.1| amidase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86558628|gb|ABD03585.1| amidohydrolase, AtzE family [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 466
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 144/288 (50%), Gaps = 36/288 (12%)
Query: 24 SVVGFVVLAETLRR--RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQ--------PL 73
SV V+A L R RR+P+LN F A LE L Q RQ PL
Sbjct: 24 SVSAQAVVAACLERIRRRDPQLNA---FTAVLEESALQAAEQ----VDRQVAQGIPVGPL 76
Query: 74 AGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAF 133
AG+ FA+K++FDV G T GS R++ A + A V L + GA +G +DE+A+
Sbjct: 77 AGVPFAVKNLFDVAGLTTLAGS-AINRENPPAIQDATVAARLKQAGAILVGTLNMDEYAY 135
Query: 134 GITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGIL 193
G EN HYG NP + GGSS GSA AVA LV ALG+DT G +RVPAS CG+
Sbjct: 136 GFVTENSHYGPTHNPHDLNRSAGGSSGGSAAAVAGGLVPLALGSDTNGSIRVPASLCGVY 195
Query: 194 GYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRAR------- 246
G +P++G +S GV + S D VG LAR+ + + V+ + +P R
Sbjct: 196 GLKPTYGRLSRAGVALFAASFDHVGPLARSVADIALSFDVMQGPDPQDPVCTRRPVDPTF 255
Query: 247 ----------RLIFADDIF-QLSKVPKLKTIHVISKAIESLSGYQNPE 283
R+ ADD F + ++ P L + +++A+ + + PE
Sbjct: 256 GQLGQGIEGLRIAVADDYFARGAEPPILAGVEKVAQALGARQTVRIPE 303
>gi|421900087|ref|ZP_16330450.1| amidase protein [Ralstonia solanacearum MolK2]
gi|206591293|emb|CAQ56905.1| amidase protein [Ralstonia solanacearum MolK2]
Length = 393
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 121/394 (30%), Positives = 171/394 (43%), Gaps = 39/394 (9%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHE--AERTAVVVTLLLKNGATCIGKTVLDE 130
LAGL +IKD+FDV G V+ GS + H+ A AV V L GA +G+T + E
Sbjct: 18 LAGLPVSIKDLFDVAGQVSAAGS---RALAHQPPAAADAVAVARLRAAGAVLLGRTNMSE 74
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FAF G N HYGTP P + GGS+SG AV VA + ALGTDT G +R+PA+FC
Sbjct: 75 FAFSGLGLNPHYGTPRTPVDGTRAAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPAAFC 134
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL----LQLNAVEPRRAR 246
+ G++P+ V M G +P S SLD+ G LA + V VL L +AV P
Sbjct: 135 ALTGFKPTARRVPMAGGVPLSTSLDSGGPLANSVDCCAIVDAVLSGQALDTDAV-PLAGL 193
Query: 247 RLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQST 306
RL D + T +A+ L Q H+ + + P L L
Sbjct: 194 RLGLTRDYVGADLDDTVVT--AFERAVMRLE--QAGAHI-----VRFDFPELLQL----- 239
Query: 307 SPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKI 366
PE + L E + + A+ + V R+ T
Sbjct: 240 -PEINSGG---------GLPAAESWAWHRPHLARAEAQYDRRVAARIRRGEQMTAAAYLD 289
Query: 367 LYKVRNEMRAALQRLLKDDKILVIPTVSD-PPLKLNTKKTYSAEFHDRTLVL---SSIGS 422
+ R M AA ++ L + ++PTV+ PP + + F LVL S I
Sbjct: 290 VMAARERMIAAARKRLGNLDAWLMPTVAIVPPEVAPLEADDTQFFRTNALVLRNPSVINF 349
Query: 423 MSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
+ GC + +PI +E P+ +S D +L
Sbjct: 350 LDGCA-LTLPIHADDELPVGLSLCGLADDDARIL 382
>gi|429216334|ref|YP_007174324.1| amidase [Caldisphaera lagunensis DSM 15908]
gi|429132863|gb|AFZ69875.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Caldisphaera lagunensis DSM 15908]
Length = 393
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 94/155 (60%), Gaps = 2/155 (1%)
Query: 80 IKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGEN 139
IKD+ KG T GS + ++ A V+TLL +NG T +GKT EFA G+T +
Sbjct: 40 IKDIIYTKGIKTTMGSKVFF--NYIPREDARVITLLKRNGYTIVGKTNTHEFASGVTNTS 97
Query: 140 KHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSH 199
+G NP I GGSS GSA AV ++ D ALGTDT G +R+PAS CG++G+RP+H
Sbjct: 98 SVFGPSRNPINKELITGGSSGGSAAAVKLKITDVALGTDTAGSIRIPASLCGVIGFRPTH 157
Query: 200 GTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL 234
G +S+ GV P + + D VG+++ N L V ++L
Sbjct: 158 GLISVKGVFPLAPTFDDVGIMSNNVEKLKEVFYIL 192
>gi|120609543|ref|YP_969221.1| amidase [Acidovorax citrulli AAC00-1]
gi|120588007|gb|ABM31447.1| Amidase [Acidovorax citrulli AAC00-1]
Length = 457
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 95/152 (62%), Gaps = 1/152 (0%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAGL ++KD+FDV+G VT GS D A A V L GA +G+T + EF
Sbjct: 74 PLAGLPVSVKDLFDVRGQVTRAGSAVLA-DAGPAPSDAAAVARLRAAGAVLLGRTNMSEF 132
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
AF G N H+GTP +PQ + GGSSSG+A VA L ALGTDT G +R+P++FCG
Sbjct: 133 AFSGLGLNPHHGTPAHPQDAGRVTGGSSSGAAATVALDLAAAALGTDTGGSIRIPSAFCG 192
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
+ G++P+ V + G P S+SLD+VG LAR+
Sbjct: 193 LTGFKPTARRVPLAGAYPLSRSLDSVGPLARS 224
>gi|357033090|ref|ZP_09095022.1| amidase [Gluconobacter morbifer G707]
gi|356413450|gb|EHH67105.1| amidase [Gluconobacter morbifer G707]
Length = 445
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 93/155 (60%), Gaps = 1/155 (0%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAG+ F IKD+FDV+G VT GS D+ A AV+V L+ GA + T +DEFA
Sbjct: 71 LAGVPFGIKDLFDVRGQVTTAGSKVLA-DNPPATEDAVLVARLIAAGAIPVALTNMDEFA 129
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+G +N H+G NP P H+ GGSS GSA VAA+L LG+DT G +RVPAS CGI
Sbjct: 130 YGFATDNAHHGVTRNPHAPDHLAGGSSGGSAAGVAARLFSLGLGSDTNGSIRVPASLCGI 189
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASIL 227
G R + G + + G P SLDTVG +AS L
Sbjct: 190 WGLRATQGRLPVKGSYPFVASLDTVGPFGDSASGL 224
>gi|302186027|ref|ZP_07262700.1| allophanate hydrolase [Pseudomonas syringae pv. syringae 642]
Length = 601
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 126/411 (30%), Positives = 182/411 (44%), Gaps = 63/411 (15%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R PL G+ FA+KD FDV T P + + AE A VV LLL +GA +GKT LD
Sbjct: 70 RLPLFGVPFAVKDNFDVAHMPTTAACPTFA---YVAEDNAHVVQLLLDSGAILMGKTNLD 126
Query: 130 EFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
+FA G+ G YG N P+++ GGSSSGSAVAVA V FALGTDT G RVPA F
Sbjct: 127 QFATGLVGVRSPYGAVRNAHDPAYVSGGSSSGSAVAVARGYVSFALGTDTAGSGRVPAGF 186
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
GI+G +PS G S G++P ++LD + AR+ +V V + A +P A +
Sbjct: 187 NGIVGLKPSLGLFSSRGIVPACRTLDCPSIFARDVMQAWQVAQV---IAAYDPLDASSVA 243
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
Q H E Q A+ LK L A P
Sbjct: 244 VQTLPVQRRVRRVAVARHC--------------EFFGDEQAKAAY---LKTLEALQNDP- 285
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYE-EWVKSAKPRLG----------YNVFERVLEAIN 358
L +S++ + +Y+ WV + +G + V ++++ +
Sbjct: 286 -----LVTVSAIEFDVFAEAAALLYQGPWVAERRAAIGEFFASNAADIHPVVRGIVQSAD 340
Query: 359 TTQ--DNIKILYKVRNEMRAALQRLLKDDKILVIPT---------VSDPPLKLNTKKTYS 407
+ D K Y++ RAA Q+LL + +LV+PT V P+ LN++ Y
Sbjct: 341 SFDAVDTFKARYRLAELTRAA-QQLLTNIDVLVVPTAPCMPTIEAVLGNPVALNSQLGYY 399
Query: 408 AEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEH-PISISFITYHGGDKFLLD 457
F + + C +AIP + + P I+ I G D+ L +
Sbjct: 400 TNFVN----------LMNMCAIAIPTDRRADGLPAGITLIGPAGADQRLAE 440
>gi|261403819|ref|YP_003248043.1| aspartyl/glutamyl-tRNA amidotransferase subunit A
[Methanocaldococcus vulcanius M7]
gi|261370812|gb|ACX73561.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Methanocaldococcus
vulcanius M7]
Length = 434
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 185/417 (44%), Gaps = 32/417 (7%)
Query: 40 NPKLNGRVDFGAFLER-FELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDW 98
N K+N ++ A ER E + A ++PL G +K +V GY S
Sbjct: 17 NKKINALIEVNA--ERVLEEAKKLEKDEKAKKKPLYGKVVVVKANINVDGYTISCASKTL 74
Query: 99 KRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGS 158
+++ A A VV + +NG IG +DEFA G +GE +YG NP+ IPGGS
Sbjct: 75 --ENYIAPYDATVVQKIKENGGLIIGIANMDEFACGSSGETSYYGATKNPKAEDRIPGGS 132
Query: 159 SSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVG 218
SSGSA AV+A L D ALG+DT G +R PAS CG++G++PS+G VS G+ + S D +G
Sbjct: 133 SSGSAAAVSADLCDLALGSDTGGSIRNPASHCGVVGFKPSYGVVSRYGLCDLAMSFDQIG 192
Query: 219 LLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKT-IHVISKAIESLS 277
L + A + +++ + + F + KV +K + V+ K I
Sbjct: 193 PLTKTAEDALLLTNIIKGKDLKDTTTVETKPFEKKDIKGFKVGVIKEFMDVVDKKIRD-- 250
Query: 278 GYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEW 337
+ + V + I + L P T L S +RY+ + +
Sbjct: 251 --KIETSIEVFKDIGCEIVELNYKYVDLALP---TYYLINYVEFFSSTRRYDGR----RY 301
Query: 338 VKSAKPRLGYNVFERVLEAINTTQDNIKILY-----KVRNEMRAALQRLLKDDKILVIPT 392
+ G V R++ +Q Y + RN MR + +++KD I+V T
Sbjct: 302 GYKIEDVCGEEVLRRIMIGSMISQKEYSGKYYKNALRARNLMRNEMIKIMKDVDIIVGAT 361
Query: 393 VSDPPLKLNTKKT----YSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISF 445
V P KL K T YS + VL+ ++ G C +P G+ N PI +
Sbjct: 362 VPKLPHKLGEKLTPMEMYSYD------VLTVPANICGLCAGVVPCGEINGIPIGLQI 412
>gi|115360091|ref|YP_777229.1| amidase [Burkholderia ambifaria AMMD]
gi|115285379|gb|ABI90895.1| Amidase [Burkholderia ambifaria AMMD]
Length = 374
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/156 (50%), Positives = 89/156 (57%), Gaps = 1/156 (0%)
Query: 75 GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFG 134
G AIKD D+ G+ T S D A R A VV LLL G GK + E AFG
Sbjct: 14 GPTIAIKDTIDIAGHPTRAASRALA-DAPPAARHADVVGLLLDAGWQIAGKANMHELAFG 72
Query: 135 ITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILG 194
+TG N GTPVNPQ P IPGGSSSGSA V LVD ALGTDT G +R PA+ CG+ G
Sbjct: 73 MTGINDFTGTPVNPQDPMRIPGGSSSGSASLVGLGLVDAALGTDTGGSIRGPAACCGVAG 132
Query: 195 YRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRV 230
+P+ G VS GV P +LD VG AR+ L V
Sbjct: 133 LKPTFGRVSRRGVAPADTTLDCVGPFARDVDTLAAV 168
>gi|340783652|ref|YP_004750258.1| amidohydrolase, AtzE family [Acidithiobacillus caldus SM-1]
gi|340557805|gb|AEK59558.1| amidohydrolase, AtzE family [Acidithiobacillus caldus SM-1]
Length = 460
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 96/156 (61%), Gaps = 1/156 (0%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ FA+K++FD++G VT GS RD A + + +V L GA +G + E+
Sbjct: 68 PLAGVPFAVKNLFDIQGEVTLAGS-KINRDLPPALQDSTLVRRLSAAGAILVGALNMGEY 126
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+ TGEN HYG NP S + GGSS GS AVA LV ALG+DT G +RVP+S CG
Sbjct: 127 AYDFTGENLHYGASRNPHDLSRMTGGSSGGSGSAVAGGLVPLALGSDTNGSIRVPSSLCG 186
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASIL 227
I G +P++G +S G P SLD VG +AR+A L
Sbjct: 187 IFGLKPTYGRLSRGGSFPFCPSLDHVGPMARSAQDL 222
>gi|227830229|ref|YP_002832009.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Sulfolobus
islandicus L.S.2.15]
gi|229579044|ref|YP_002837442.1| aspartyl/glutamyl-tRNA amidotransferase subunit A [Sulfolobus
islandicus Y.G.57.14]
gi|385773211|ref|YP_005645777.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfolobus
islandicus HVE10/4]
gi|385775845|ref|YP_005648413.1| glutamyl-tRNA(Gln) amidotransferase subunit A [Sulfolobus
islandicus REY15A]
gi|227456677|gb|ACP35364.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sulfolobus
islandicus L.S.2.15]
gi|228009758|gb|ACP45520.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sulfolobus
islandicus Y.G.57.14]
gi|323474593|gb|ADX85199.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sulfolobus
islandicus REY15A]
gi|323477325|gb|ADX82563.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Sulfolobus
islandicus HVE10/4]
Length = 474
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 187/411 (45%), Gaps = 43/411 (10%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAG+ AIKD KG T S + + A V+ L K GA +GKT +DEFA
Sbjct: 60 LAGILIAIKDNISTKGIRTTCASK--MLEDYIPPYDATVIEKLKKEGAVIVGKTNMDEFA 117
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G T E ++G NP PGGSS GS A+AA V+ ALG+DT G +R PA++
Sbjct: 118 MGSTTETSYFGPTRNPWNLERTPGGSSGGSGAALAAGYVELALGSDTGGSIRAPAAYNAT 177
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL------------LQLN-- 238
G +PS+GTVS G++ + SL+ +G +ARNA L + ++ L LN
Sbjct: 178 FGLKPSYGTVSRFGLVAYANSLEQIGPMARNAEDLGLLFSIIAGPDDKDATTIDLSLNFE 237
Query: 239 -AVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPS 297
+ ++ R+ DI ++S+ P I + + S + +Y +P+
Sbjct: 238 FKEQNVKSVRIGILSDILEMSEKPVSGVIKDVIDKLSSEGALIEDTKLGNAEYA---LPA 294
Query: 298 LKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFER----- 352
+ A S + N L V +Y E + K+ G V R
Sbjct: 295 YY-IIAMSEASSN----LARYDGVRYGYSKYMEGNWREVYAKNRGEAFGIEVKRRILLGS 349
Query: 353 -VLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKL-----NTKKTY 406
+L A + +K L KVRN ++ +L L K ILV PT+ P K+ + + Y
Sbjct: 350 FILSAGYYEEFYLKAL-KVRNLIKKSLDELFKKYDILVSPTMPILPPKIGEVINDPVRMY 408
Query: 407 SAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
+ + + + I +++ +++P G YN+ PI + + + D +L++
Sbjct: 409 AMDLN------TVIANLAAIPALSLPAGFYNDLPIGLQLMGKYLSDIYLIN 453
>gi|374629456|ref|ZP_09701841.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
[Methanoplanus limicola DSM 2279]
gi|373907569|gb|EHQ35673.1| aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
[Methanoplanus limicola DSM 2279]
Length = 431
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 189/425 (44%), Gaps = 50/425 (11%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L+G+ A+KD +G T GS K + A VVTLL K GA IGKT +DEF
Sbjct: 29 LSGIPVAVKDNICTRGIETTAGSAILK--GFTSPYDAHVVTLLKKAGAAIIGKTNMDEFG 86
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G T E+ +G +NP P +PGGSS GSA AVA+ +V ALGTDT G +R PAS+CGI
Sbjct: 87 MGTTTESSAFGPTLNPIDPERVPGGSSGGSAAAVASGMVPMALGTDTGGSIRCPASYCGI 146
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPR--------- 243
+G +PS G VS G++ S SL+ +G +A N S + ++ V+ + +
Sbjct: 147 VGLKPSFGRVSRYGLIAYSNSLEQIGPMAENVSDVSKLMGVIAGYDRRDSTAYDRPYSHT 206
Query: 244 -----RARRLIFADDIFQLSKVPKL-KTIHVISKAIESLSGYQNPEHMNVGQYIASNVPS 297
+ +++ + F K+ +T+ +ESL + + +PS
Sbjct: 207 PNADIKGKKIGIPKEYFGEGVNEKVAETVRDAISVLESLG----------AETVECTIPS 256
Query: 298 LKGLRAQS--TSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLE 355
++ A T ++ L V + + K + E+ + G V R++
Sbjct: 257 MEYALAAYYVTCTSEASSNLSRFDGVRFGPRVEKKKQWHAEYRDLRGEKFGEEVQRRIML 316
Query: 356 AINTTQDNIKILY-----KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEF 410
Y R ++ R+LKD ++ PT+ + K+ E
Sbjct: 317 GTFALSAGYYGKYYAKACTARANIKNDFLRVLKDVDLIAGPTMPNIAPKI-------GEL 369
Query: 411 HD-RTLVLSSI----GSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDS 465
D + LS I +++G +++P GK P+ + I H F + V+D +
Sbjct: 370 EDPLEMYLSDILTVPANLAGVPAISVPCGKVTGMPVGLQLIGTH----FNEEGVVDAAYA 425
Query: 466 LQEQV 470
+E+V
Sbjct: 426 FEEEV 430
>gi|433773088|ref|YP_007303555.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Mesorhizobium australicum WSM2073]
gi|433665103|gb|AGB44179.1| amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
[Mesorhizobium australicum WSM2073]
Length = 443
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 97/155 (62%), Gaps = 1/155 (0%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL G +IKD+FDV G T GS ++ A+R A +V+ L + GA IGKT + EF
Sbjct: 52 PLDGTIVSIKDLFDVAGEPTTAGSL-MRKTAAPAQRDAAIVSRLRQAGAVVIGKTNMTEF 110
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
AF G+N HYGTP N S IPGGSSSG+ V+V D ++G+DT G +R+PA+ G
Sbjct: 111 AFTAIGDNMHYGTPGNAVDASRIPGGSSSGAGVSVGEGTSDISIGSDTGGSIRIPAALNG 170
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASI 226
++G++P+ V + G P S +LD+VG LAR SI
Sbjct: 171 VVGFKPTARRVPLSGTFPLSGTLDSVGPLARTVSI 205
>gi|443645177|ref|ZP_21129027.1| Allophanate hydrolase [Pseudomonas syringae pv. syringae B64]
gi|443285194|gb|ELS44199.1| Allophanate hydrolase [Pseudomonas syringae pv. syringae B64]
Length = 601
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 126/411 (30%), Positives = 181/411 (44%), Gaps = 63/411 (15%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R PL G+ FA+KD FDV T P + + E A VV LLL +GA +GKT LD
Sbjct: 70 RLPLFGVPFAVKDNFDVAHMPTTAACPAFA---YVPEDNAHVVQLLLDSGAILMGKTNLD 126
Query: 130 EFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
+FA G+ G YG N P+++ GGSSSGSAVAVA V FALGTDT G RVPA F
Sbjct: 127 QFATGLVGVRSPYGAVRNAHDPAYVSGGSSSGSAVAVARGYVSFALGTDTAGSGRVPAGF 186
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
GI+G +PS G S GV+P ++LD + A++ +V V + A +P A +
Sbjct: 187 NGIVGLKPSLGLFSSRGVVPACRTLDCPSIFAKDVMQAWQVAQV---IAAYDPLDASSVA 243
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
Q H E Q A+ LK L A P
Sbjct: 244 VQALPVQRRVRRVAVARHC--------------EFFGDEQAKAAY---LKTLEALQNDP- 285
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYE-EWVKSAKPRLG----------YNVFERVLEAIN 358
L +S++ + +Y+ WV + +G + V ++++ +
Sbjct: 286 -----LVTVSTIEFDVFAEAAALLYQGPWVAERRAAIGEFFASNAADIHPVVRGIVQSAD 340
Query: 359 TTQ--DNIKILYKVRNEMRAALQRLLKDDKILVIPT---------VSDPPLKLNTKKTYS 407
+ D Y++ RAA Q+LL D +LV+PT V P+ LN++ Y
Sbjct: 341 SFDAVDTFNARYRLAELTRAA-QQLLTDIDVLVVPTAPCMPTIEAVLGNPVALNSQLGYY 399
Query: 408 AEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEH-PISISFITYHGGDKFLLD 457
F + + C +AIP G+ + P I+ I G D+ L +
Sbjct: 400 TNFVN----------LMNMCAIAIPTGRRADGLPAGITLIGPAGADQRLAE 440
>gi|374705054|ref|ZP_09711924.1| Amidase [Pseudomonas sp. S9]
Length = 380
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/149 (51%), Positives = 91/149 (61%), Gaps = 1/149 (0%)
Query: 75 GLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFG 134
GL+ AIKD D+ G T GS + + A R A VV +L G +GKT + E AFG
Sbjct: 14 GLRVAIKDSIDIAGQPTRAGSRALE-NVTPATRHAAVVEAILAAGWHIVGKTNMHELAFG 72
Query: 135 ITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILG 194
+TG N GT +NPQ PS +PGGSSSGSA AV A LVD ALGTDT G VRVPA+ CG+ G
Sbjct: 73 VTGINSWTGTALNPQAPSRVPGGSSSGSAAAVGAGLVDVALGTDTGGSVRVPAACCGVFG 132
Query: 195 YRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
+P VS GV P +LD VG A N
Sbjct: 133 LKPKFAMVSREGVYPALTTLDCVGPFAAN 161
>gi|365899622|ref|ZP_09437513.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Bradyrhizobium sp. STM 3843]
gi|365419583|emb|CCE10055.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Bradyrhizobium sp. STM 3843]
Length = 458
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 92/156 (58%), Gaps = 1/156 (0%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ FA+K++FDVKG T GS RD A R A ++ + GA +G + E+
Sbjct: 65 PLAGVPFAVKNLFDVKGLATRAGS-KINRDLPPAARDATLIERMEAAGAVLVGALNMGEY 123
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+ TGEN H G NP + + GGSS GS AV +LV ALG+DT G +RVP+SFCG
Sbjct: 124 AYDFTGENVHDGPSRNPHDATRMSGGSSGGSGSAVGGRLVPLALGSDTNGSIRVPSSFCG 183
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASIL 227
I G +P++G +S P SLD +G AR+ L
Sbjct: 184 IFGLKPTYGRLSRARSFPFVASLDHLGPFARSVEDL 219
>gi|367478147|ref|ZP_09477468.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Bradyrhizobium sp. ORS 285]
gi|365269536|emb|CCD89936.1| putative glutamyl-tRNA (Gln) amidotransferase subunit A
[Bradyrhizobium sp. ORS 285]
Length = 475
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 92/156 (58%), Gaps = 1/156 (0%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ FA+K++FDV+G T GS RD A R A ++ + GA +G + E+
Sbjct: 74 PLAGVPFAVKNLFDVEGLPTRAGS-KINRDRAPASRDATLIERMESAGAVLVGALNMGEY 132
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+ TGEN H G NP PS + GGSS GS AV LV ALG+DT G +RVP+SFCG
Sbjct: 133 AYDFTGENVHDGPSRNPHDPSRMSGGSSGGSGSAVGGGLVPIALGSDTNGSIRVPSSFCG 192
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASIL 227
I G +P++G +S P SLD +G AR+ L
Sbjct: 193 IFGLKPTYGRLSRARSFPFVMSLDHLGPFARSVDDL 228
>gi|187476799|ref|YP_784823.1| amidase [Bordetella avium 197N]
gi|115421385|emb|CAJ47890.1| putative amidase [Bordetella avium 197N]
Length = 469
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/173 (46%), Positives = 105/173 (60%), Gaps = 4/173 (2%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL GL A+KD+ D++G +T GS W++ +E TA VT LL G +GKT + EF
Sbjct: 72 PLDGLPIAVKDLCDIEGQITTGGSAAWRQ--RRSEVTATAVTRLLDAGMVILGKTQMVEF 129
Query: 132 AFGITGENKHYGTPVNPQMPSH--IPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
AFG G N GTP NP H IPGGSSSGS VAVAA LV ALG+DT G VR+PA+
Sbjct: 130 AFGGWGTNPLLGTPRNPWDMQHARIPGGSSSGSGVAVAAGLVPAALGSDTGGSVRIPAAL 189
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
G+ G + + G +S+ G +P S SLD++G L R+ + VL +A +P
Sbjct: 190 NGVTGLKTTRGLISLYGAVPLSTSLDSIGPLTRDTRDAMLLTAVLAGPDARDP 242
>gi|330993512|ref|ZP_08317447.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Gluconacetobacter
sp. SXCC-1]
gi|329759542|gb|EGG76051.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Gluconacetobacter
sp. SXCC-1]
Length = 453
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 99/159 (62%), Gaps = 1/159 (0%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ F +KD+FDV+G VT GS RD+ A R A VV L GA + +DEF
Sbjct: 69 PLAGVPFGVKDLFDVQGEVTTAGS-IVLRDNLPASRDAAVVARLRAAGAVPVATLNMDEF 127
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+G + EN H GT NP P+ + GGSS GSA +VAA L+ FALG+DT G +RVP+S CG
Sbjct: 128 AYGFSTENAHTGTTRNPHDPACLAGGSSGGSAASVAAGLLPFALGSDTNGSIRVPSSLCG 187
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRV 230
+ G +P++G V + GV P SLD VG +A L V
Sbjct: 188 VWGLKPTYGQVPLQGVYPFVASLDVVGPMASTVEDLQAV 226
>gi|453084333|gb|EMF12377.1| amidase signature enzyme, partial [Mycosphaerella populorum SO2202]
Length = 602
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 140/283 (49%), Gaps = 26/283 (9%)
Query: 57 ELIPFPQP---PPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVT 113
E IP P P+ +PL+G + +KD+FD++G T S D+ + A+ TA VV
Sbjct: 162 EFIPLPSRHYFDQPSDEKPLSGKRIGVKDIFDLRGVPTSASSRDYSAFYGAADSTAPVVQ 221
Query: 114 LLLKNGATCIGKTVLDEFAFGITGENKH----YGTPVNPQMPSHIPGGSSSGSAVAVAA- 168
L+ GA +GKT +FA +GE H + P NP+ ++ SS + AA
Sbjct: 222 RLIDAGAVIVGKTKTAQFA---SGEYAHDWVDFLCPFNPRGDGYMEPDCSSSGSAVAAAG 278
Query: 169 -QLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASIL 227
+DFALGTDT+G + PA+ G+ G RP+HGT M G+LP S LDT+G AR+ + L
Sbjct: 279 YDWLDFALGTDTLGSIVGPAALQGVFGIRPTHGTTDMTGILPVSSLLDTIGPFARSITEL 338
Query: 228 HRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNV 287
V + + + RL+ + F PK + ++ +E +H++V
Sbjct: 339 RLFAPVWYEDHHMSSDSPIRLLCPTEYFDAWPAPKRQIMNAFIDDME--------KHLSV 390
Query: 288 GQYIASNVPSLKGLRAQSTSPENGTATLKA-LSSVMLSLQRYE 329
+ A ++ LRA P++ +L+ L V+ +Q Y+
Sbjct: 391 TR-TAYDLHEEWKLRA----PDDCARSLETHLDKVLAYIQLYD 428
>gi|388469706|ref|ZP_10143915.1| putative amidase IacH [Pseudomonas synxantha BG33R]
gi|388006403|gb|EIK67669.1| putative amidase IacH [Pseudomonas synxantha BG33R]
Length = 370
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 92/154 (59%), Gaps = 1/154 (0%)
Query: 74 AGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAF 133
+GL +KD D+ G+ T GS + A+ A VV LL +GKT L E AF
Sbjct: 13 SGLSVMVKDTIDIAGFATRAGS-QALENAAAAQEHAQVVEALLAGNCRILGKTSLHELAF 71
Query: 134 GITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGIL 193
G TG N GT NP P IPGGSSSGSA AVAA LVDFALGTDT G VRVPA+ CG+
Sbjct: 72 GTTGINHWSGTADNPLYPGLIPGGSSSGSAAAVAAGLVDFALGTDTGGSVRVPAACCGVF 131
Query: 194 GYRPSHGTVSMIGVLPNSQSLDTVGLLARNASIL 227
G +P+ G +S GV+P SLD VG A + +L
Sbjct: 132 GLKPTFGRISRAGVMPGVSSLDCVGPFAASMELL 165
>gi|113477617|ref|YP_723678.1| amidase [Trichodesmium erythraeum IMS101]
gi|110168665|gb|ABG53205.1| Amidase [Trichodesmium erythraeum IMS101]
Length = 462
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 102/175 (58%), Gaps = 1/175 (0%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAG+ FA+K+++D+ G T G+ ++ A + A VT L K GA +G +DE+A
Sbjct: 73 LAGIPFAVKNLYDIAGLTTLAGA-KINAENPPATQDATAVTKLKKAGAILVGALNMDEYA 131
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
+G EN HYG NP S I GGSS SA AVAA LV LG+DT G +RVPAS CG+
Sbjct: 132 YGFVTENSHYGATPNPHDLSRISGGSSGASAAAVAAGLVPITLGSDTNGSIRVPASLCGV 191
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
G++P++G +S GV + SLD VG AR+ + V +L + +P +R
Sbjct: 192 FGFKPTYGRLSRAGVFLFASSLDNVGPFARSVRDIATVYDILQGSDTRDPVCTKR 246
>gi|187927611|ref|YP_001898098.1| amidase [Ralstonia pickettii 12J]
gi|187724501|gb|ACD25666.1| Amidase [Ralstonia pickettii 12J]
Length = 452
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 91/162 (56%), Gaps = 1/162 (0%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAGL +IKD+FDV G VT GS D A A V L GA +G+T + EFA
Sbjct: 73 LAGLPVSIKDLFDVAGQVTAAGSRALA-DQPRATTDAAAVARLRAAGAVLLGRTNMSEFA 131
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
F G N HYGTP P + GGS+SG AV VA + ALGTDT G +R+P++FC +
Sbjct: 132 FSGLGLNPHYGTPRTPADGARAAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPSAFCNL 191
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL 234
G++P+ V M G +P S SLD+ G LA + V VL
Sbjct: 192 TGFKPTARRVPMTGGVPLSTSLDSGGPLANSVDCCAIVDAVL 233
>gi|317486387|ref|ZP_07945215.1| amidase [Bilophila wadsworthia 3_1_6]
gi|316922376|gb|EFV43634.1| amidase [Bilophila wadsworthia 3_1_6]
Length = 459
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 97/177 (54%), Gaps = 7/177 (3%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R PL G+ IKD DV+G T SP + A+ AV V L GA GKT LD
Sbjct: 69 RGPLHGIPLVIKDNIDVRGLPTTVASPLFTH-AAPAKADAVAVARLRAAGAVIFGKTNLD 127
Query: 130 EFAFGITGENKHYGTPVNPQMPSH--IPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
E A ++G +G VNP P PGGSSSG+A AVAA LGTDT G +R+PA
Sbjct: 128 ELAAHVSGRTSCFGPTVNPWHPERRLSPGGSSSGTAAAVAAGYCPGGLGTDTGGSIRLPA 187
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRR 244
+CG+ G R + G + G+ P + SLDTVG +AR+A R +LLQ+ A P R
Sbjct: 188 GWCGLYGIRSTQGQSDISGIYPRAASLDTVGAMARSA----RDIDLLLQILADPPLR 240
>gi|319792155|ref|YP_004153795.1| amidase [Variovorax paradoxus EPS]
gi|315594618|gb|ADU35684.1| Amidase [Variovorax paradoxus EPS]
Length = 449
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 94/154 (61%), Gaps = 5/154 (3%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAGL ++KD++DV G T GS + + A R AV V L GA +GKT + EFA
Sbjct: 71 LAGLPVSVKDLYDVAGETTMAGSAVCEGEP-PAARDAVAVARLRTQGAAIVGKTNMTEFA 129
Query: 133 FGITGENKHYGTPVNPQ---MPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
F G N HYGTP NP MP IPGGSSSG+AV+VA L LG+DT G +R+PA+
Sbjct: 130 FSGVGINPHYGTPHNPADAGMP-RIPGGSSSGAAVSVALGLAVAGLGSDTGGSIRIPAAL 188
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
CG++G++ + V G ++SLDTV +AR+
Sbjct: 189 CGLVGFKSTQSRVPRTGAFELARSLDTVCAMARS 222
>gi|410091711|ref|ZP_11288262.1| allophanate hydrolase [Pseudomonas viridiflava UASWS0038]
gi|409760944|gb|EKN46055.1| allophanate hydrolase [Pseudomonas viridiflava UASWS0038]
Length = 602
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 130/436 (29%), Positives = 197/436 (45%), Gaps = 66/436 (15%)
Query: 70 RQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLD 129
R PL G FA+KD FDV G T P++ ++A+ TA VV LL +GA IGKT LD
Sbjct: 70 RLPLFGTPFAVKDNFDVAGLPTTAACPEFA---YQAQTTAHVVQRLLDSGAVLIGKTNLD 126
Query: 130 EFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASF 189
+FA G+ G YG N P+++ GGSSSGSAVAVA V FALGTDT G RVPA F
Sbjct: 127 QFATGLVGVRSPYGAVRNACDPAYVSGGSSSGSAVAVARGHVCFALGTDTAGSGRVPAGF 186
Query: 190 CGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI 249
GI+G +PS G S GV+P ++LD + A + + +V V+ +A +
Sbjct: 187 NGIVGLKPSLGLFSSRGVVPACRTLDCPSIFANDVAQAWQVAQVMADFDAQDSAS----- 241
Query: 250 FADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPE 309
+ +P L+ I+ P+H + K L++ P+
Sbjct: 242 -----VAVKALPMLRRARRIAV----------PQHCEFFGDAQAAAAFDKALKSLENDPQ 286
Query: 310 NGTATLKALSSVMLSLQRYEFKTIYE-EWVKSAKPRLG----------YNVFERVLEAIN 358
L+ V + +Y+ WV + +G + V +L++ +
Sbjct: 287 ------VTLTYVAFDVFAEAAALLYQGPWVAERRAAVGEFFETHAADIHPVVRGILQSAD 340
Query: 359 TTQ--DNIKILYKVRNEMRAALQRLLKDDKILVIPT---------VSDPPLKLNTKKTYS 407
D K Y++ RAA + LL + +LV+PT V P++LN++ Y
Sbjct: 341 QFDAVDTFKARYRLAELTRAA-EALLAEVDVLVVPTAPCMPTIEAVLANPVELNSQLGYY 399
Query: 408 AEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEH-PISISFITYHGGDKFLLDTV--LDLYD 464
F ++ +MS +AIP + ++ P I+ I G D+ L + Y
Sbjct: 400 TNF-------VNLMNMSA---LAIPAHRRDDGLPAGITLIGPAGADQRLAEIAAGWQAYF 449
Query: 465 SLQEQVNIASNLVPLP 480
+Q + + L PLP
Sbjct: 450 GASDQRDSVA-LAPLP 464
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,884,608,304
Number of Sequences: 23463169
Number of extensions: 374727878
Number of successful extensions: 1192300
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 16702
Number of HSP's successfully gapped in prelim test: 1562
Number of HSP's that attempted gapping in prelim test: 1158338
Number of HSP's gapped (non-prelim): 25496
length of query: 575
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 427
effective length of database: 8,886,646,355
effective search space: 3794597993585
effective search space used: 3794597993585
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.4 bits)