BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008170
(575 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|F4KCL7|OE64M_ARATH Outer envelope protein 64, mitochondrial OS=Arabidopsis thaliana
GN=OM64 PE=1 SV=1
Length = 603
Score = 744 bits (1921), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/556 (64%), Positives = 449/556 (80%), Gaps = 3/556 (0%)
Query: 1 MSKSFNIIKTNTSNPKVWVVIGVSVVGFVVLAETLRRRRNPKLNGRVDFGAFLERFELIP 60
MS + ++I++N SNPKVWVVIGV+V G V+LAET R+RR L DFGAFL+RFEL+P
Sbjct: 1 MSNTLSLIQSNASNPKVWVVIGVTVAGIVILAET-RKRRIRALREE-DFGAFLDRFELLP 58
Query: 61 FPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGA 120
FP PPPPAA+Q L+GL F+I D FDVK Y+TGFG P WK+ H AE+TAVVVT LLKNGA
Sbjct: 59 FPPPPPPAAKQSLSGLTFSISDAFDVKDYITGFGCPQWKKTHEAAEKTAVVVTTLLKNGA 118
Query: 121 TCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTI 180
TC+GKT++DE FGI GENKHYGTP+NP MP ++PGG SSGSAV+V A+LVDF+LG DT
Sbjct: 119 TCVGKTIMDELGFGIIGENKHYGTPINPLMPDNVPGGCSSGSAVSVGAELVDFSLGIDTT 178
Query: 181 GCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAV 240
G VRVPA+FCGILG+RPS GTVS +GVLPNSQSL+TVG A + S+L +VGH LL L+AV
Sbjct: 179 GGVRVPAAFCGILGFRPSQGTVSSVGVLPNSQSLETVGWFASDPSVLCQVGHALLNLSAV 238
Query: 241 EPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKG 300
RR R LIFADD+F+LS +PK K++ V+ KAIE+LSGY+ P+H+NVGQY+ASNVPSL
Sbjct: 239 THRRQRSLIFADDLFELSDIPKQKSVQVVRKAIENLSGYKTPKHVNVGQYVASNVPSLAE 298
Query: 301 LRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTT 360
QS +N +TL+ALSSVML++QR+EFKT +EEW ++ K LG V+ A+ +
Sbjct: 299 FCEQSGKSQNSASTLRALSSVMLAIQRHEFKTNHEEWWQTCKSFLGPRFSNDVVTALKSK 358
Query: 361 QDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYS-AEFHDRTLVLSS 419
++IK LY+V+NEMRA +Q LLK+D ILVIPTV+DPP +LNTK+ S EF DRT LS
Sbjct: 359 NESIKSLYRVKNEMRATIQSLLKEDGILVIPTVADPPPRLNTKRNKSLNEFLDRTYALSC 418
Query: 420 IGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNLVPL 479
I SMSGCCQV IP+G++ + PIS+S +TY+GGDKFLLDT LD+Y SLQ+Q +ASNL P+
Sbjct: 419 IASMSGCCQVTIPLGEHGDRPISVSLLTYYGGDKFLLDTTLDVYASLQDQAKLASNLAPV 478
Query: 480 PDTNGSIDASELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCF 539
DTNG+++ASE++KEKGNAA+KGKQWNKAVN+Y+EAIKLNG +ATYY NRAAA+LEL CF
Sbjct: 479 SDTNGNMEASEVMKEKGNAAYKGKQWNKAVNFYTEAIKLNGANATYYCNRAAAFLELCCF 538
Query: 540 QQAEEDCSKTISLDKK 555
QQAE+DC+K + +DKK
Sbjct: 539 QQAEQDCTKAMLIDKK 554
>sp|Q9MUK5|TOC64_PEA Translocon at the outer membrane of chloroplasts 64 OS=Pisum
sativum GN=TOC64 PE=1 SV=1
Length = 593
Score = 489 bits (1259), Expect = e-137, Method: Compositional matrix adjust.
Identities = 272/540 (50%), Positives = 367/540 (67%), Gaps = 6/540 (1%)
Query: 16 KVWVVIGVSVVGFVVLAETLRRRRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAG 75
++WV++G+ + G VL L + + DFGAFL + +L+P P P PP A PL+
Sbjct: 10 QIWVILGLGLAGIYVLTRKLTQAV------KEDFGAFLLKLKLLPPPPPAPPKAPHPLSS 63
Query: 76 LKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGI 135
L FAI D+FD++G+V+ FG P+W R H A TA V+ L+++GATCIG TV+DE A+GI
Sbjct: 64 LNFAISDIFDIEGHVSTFGHPEWARTHEPASSTASAVSALVESGATCIGTTVVDELAYGI 123
Query: 136 TGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGY 195
+GENKH+GTP NP +P+ +PGGSSSG+AVAVAA VDF+LG DT G VRVPA FCGILG+
Sbjct: 124 SGENKHFGTPTNPAVPNRVPGGSSSGAAVAVAANFVDFSLGVDTSGGVRVPAGFCGILGF 183
Query: 196 RPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFADDIF 255
RPSHG VS +G++P S SLDTVG A++ +L RVGH+LLQ V R R++I ADD F
Sbjct: 184 RPSHGAVSHVGIIPVSTSLDTVGWFAKDPDVLRRVGHILLQAPFVMQRNPRQIIIADDCF 243
Query: 256 QLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPENGTATL 315
Q VP +T V+ KA E L G Q +H+N YI+S V SLK Q ++ +++L
Sbjct: 244 QHLNVPLDRTSQVVIKATEKLFGKQVLKHINFEDYISSKVSSLKACSIQKSNGVLKSSSL 303
Query: 316 KALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTTQDNIKILYKVRNEMR 375
K L++VM SLQR+EF+ + EW+ KP L V ++ E ++ I+ VR+E+R
Sbjct: 304 KLLANVMQSLQRHEFEHTHSEWMSIVKPDLHPAVSAQLHEKFEVSELEIENSKSVRSELR 363
Query: 376 AALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGK 435
A+ LLKD+ +LVIPTV+DPP KL K+ S ++ R L L SI S+SGCCQV +P+G
Sbjct: 364 VAVNSLLKDEGVLVIPTVADPPPKLGGKEFLSHDYQSRALSLLSIASISGCCQVTVPLGF 423
Query: 436 YNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQVNIASNLVPLPDTNGSIDASELLKEK 495
++++P+S+S I HGGD+FLLDT+ +Y LQEQ +IA+ ++E+ KEK
Sbjct: 424 FDKNPVSVSLIARHGGDRFLLDTLKTMYTVLQEQADIAAPSKSSKSVVSKEQSAEISKEK 483
Query: 496 GNAAFKGKQWNKAVNYYSEAIKLNGTSATYYSNRAAAYLELGCFQQAEEDCSKTISLDKK 555
GN A+K KQW KA+ +Y+EAIKL G +ATYYSNRA AYLELG + QAEEDC+ IS DKK
Sbjct: 484 GNQAYKDKQWQKAIGFYTEAIKLCGNNATYYSNRAQAYLELGSYLQAEEDCTTAISFDKK 543
>sp|Q9LVH5|OE64C_ARATH Outer envelope protein 64, chloroplastic OS=Arabidopsis thaliana
GN=OEP64 PE=1 SV=1
Length = 589
Score = 480 bits (1236), Expect = e-134, Method: Compositional matrix adjust.
Identities = 262/510 (51%), Positives = 343/510 (67%)
Query: 46 RVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEA 105
R DFGAF+++ L+P PQP PP A PL GL FA+ DVFD+ GYVTGFG PDW R H A
Sbjct: 31 REDFGAFIDKLMLLPPPQPAPPKAPHPLTGLTFAVSDVFDITGYVTGFGHPDWVRTHEAA 90
Query: 106 ERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVA 165
T+ VV+ L++ GATC+GKTV+DEFAF I+GENKHY +P NP P+ IPGG+ SG+AVA
Sbjct: 91 SSTSPVVSTLVEGGATCVGKTVVDEFAFSISGENKHYDSPTNPAAPTRIPGGACSGAAVA 150
Query: 166 VAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNAS 225
VA VDFALG DT+G VRVPA +CG+LG++ S+G +S G++P S SLD+VG AR+ +
Sbjct: 151 VATNAVDFALGIDTVGGVRVPAGYCGVLGFKSSYGAISNTGIIPVSSSLDSVGWFARDPN 210
Query: 226 ILHRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHM 285
L RVGHVLLQL R R++I ADD FQL K+P + V++K+ E L G Q +H
Sbjct: 211 TLRRVGHVLLQLPFATQRNPRQIILADDCFQLLKIPVDRITQVVTKSAEKLFGRQLLKHQ 270
Query: 286 NVGQYIASNVPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRL 345
N+ Y + VPSLK +T + L++VM LQR+EF + +W+ + KP +
Sbjct: 271 NLETYFETKVPSLKEFARTKAIANTKVSTSRLLANVMQLLQRHEFLQNHGDWINTVKPAI 330
Query: 346 GYNVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKT 405
+ +V E T + + L +RNE R A+ LLKDD ILVIPT+ P KL +K+
Sbjct: 331 DPVILSQVCENPELTNEETENLNAIRNETRVAIGSLLKDDGILVIPTLPAVPPKLGSKEI 390
Query: 406 YSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDS 465
S ++ +R L SI S+SGCCQV +P+G + + PIS+SFI HGGD+FLLDTV +Y S
Sbjct: 391 TSEDYQNRASSLLSIASISGCCQVTVPLGHHEKCPISVSFIGRHGGDRFLLDTVQTMYPS 450
Query: 466 LQEQVNIASNLVPLPDTNGSIDASELLKEKGNAAFKGKQWNKAVNYYSEAIKLNGTSATY 525
LQE +I ++ +++E+ KEKGN AFK K W KA+ YSEAIKL+ +ATY
Sbjct: 451 LQEYSSIVTDPKSSKKAITKEESAEIAKEKGNQAFKEKLWQKAIGLYSEAIKLSDNNATY 510
Query: 526 YSNRAAAYLELGCFQQAEEDCSKTISLDKK 555
YSNRAAAYLELG F QAEEDC+K I+LDKK
Sbjct: 511 YSNRAAAYLELGGFLQAEEDCTKAITLDKK 540
>sp|Q9FR37|AMI1_ARATH Amidase 1 OS=Arabidopsis thaliana GN=AMI1 PE=1 SV=1
Length = 425
Score = 369 bits (947), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/423 (47%), Positives = 261/423 (61%), Gaps = 11/423 (2%)
Query: 48 DFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAER 107
DFGAF+E+ + P ++ L GL FAIKD+FDV+G VTGFG+PDW R H A
Sbjct: 6 DFGAFIEKVTISPTSTS---SSPPSLQGLTFAIKDIFDVEGRVTGFGNPDWLRTHSAATS 62
Query: 108 TAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVA 167
TA VV+ LL+ GAT +G T++DE A+ I GEN HYGTP NP +PGGSSSGSAVAVA
Sbjct: 63 TAPVVSSLLEAGATALGITIMDEMAYSINGENAHYGTPRNPIAFDRVPGGSSSGSAVAVA 122
Query: 168 AQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASIL 227
A+LVDF++GTDT G VRVPAS+CGI G+RPSHG VS +G+ P +QS DTVG AR+ + L
Sbjct: 123 ARLVDFSIGTDTGGSVRVPASYCGIFGFRPSHGAVSTVGLTPMAQSFDTVGWFARDTATL 182
Query: 228 HRVGHVLLQLNAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIE-SLSGYQNPEHMN 286
RVG VLLQ + + P +LI ADD F+L VP + + ++E S G + +N
Sbjct: 183 KRVGCVLLQQHHLNPIEPSQLIIADDCFKLCSVPHDLLVQPLVGSVEKSFGGNTVVKKVN 242
Query: 287 VGQYIASNVPSLKGLRAQ---STSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKP 343
+G+YI NVPSLK +T E +L ALSS M LQR+EFK + W+ S KP
Sbjct: 243 LGEYIGQNVPSLKHFMTSDDVTTQQEFCIPSLMALSSSMRLLQRHEFKINHGAWISSVKP 302
Query: 344 RLGYNVFERVLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTK 403
G + ER+ EAI T+ + I V++E+ AL LL + +LVIPTV PP L
Sbjct: 303 EFGPGISERIEEAIRTSDEKIDHCRSVKSELITALSTLLGEKGVLVIPTVPGPPPHLQAN 362
Query: 404 KTYSAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLY 463
F R L SI +SG CQV+IP+G + P+S+S + +G D FL L L
Sbjct: 363 VAALESFRSRAFSLLSIAGVSGFCQVSIPLGLHENLPVSVSLVAKYGSDGFL----LSLV 418
Query: 464 DSL 466
DSL
Sbjct: 419 DSL 421
>sp|Q8PXJ1|GATA_METMA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina
mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM
11833 / OCM 88) GN=gatA PE=3 SV=1
Length = 476
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 128/418 (30%), Positives = 186/418 (44%), Gaps = 52/418 (12%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ AIKD V G GS + + A V+ LL GA +GKT +DEF
Sbjct: 61 PLAGVPIAIKDNISVVGLPNSCGSK--ILEGYVPPFNAHVIEKLLSAGAVILGKTNMDEF 118
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G + E H+G NP +PGGSS GSA VAA FALG+DT G VR PASFCG
Sbjct: 119 AMGSSTETSHFGPTANPWDLERVPGGSSGGSAAVVAAGEAPFALGSDTGGSVRCPASFCG 178
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
++G +P++G VS GV+ + SL+ VG LA N + VL+ + A RR I +
Sbjct: 179 VVGLKPTYGAVSRYGVVAYANSLEQVGPLANNVEDI----AVLMDVIAGYDRRDSTSIDS 234
Query: 252 DDIFQLSKVPKLKTIHV-ISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQSTSPEN 310
+Q + V +K + + + K + H +V + + + + L A T E
Sbjct: 235 KTEYQKALVDDVKGLKIGVPKEF-----FGEGIHPDVEKAVWDAIHKCESLGA--TWEEV 287
Query: 311 GTATLK---------ALSSVMLSL-----QRYEFKTIYEEW----VKSAKPRLGYNVFER 352
+K A+S +L RY F+ E W K+ G V R
Sbjct: 288 SMPHIKYALASYYIIAMSEASSNLARFDGTRYGFRAGGENWHAMVSKTRAEGFGTEVKRR 347
Query: 353 VLEAINTTQDNIKILY-----KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYS 407
+L Y KVR ++ + L +L+ PT+ +P K+ K
Sbjct: 348 ILLGTYALSAGYHDKYYLKALKVRTLVKQDFDKALSKVDLLMAPTMPNPAFKIGEK---- 403
Query: 408 AEFHD-RTLVLSSIGS----MSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVL 460
D TL LS I + ++G +++P G + PI + + G F +TVL
Sbjct: 404 --IEDPLTLYLSDINTCPINLAGVPSISVPCGFTDGLPIGLQIM----GKPFDEETVL 455
>sp|Q8THJ1|GATA_METAC Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=gatA PE=3 SV=1
Length = 476
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 124/416 (29%), Positives = 184/416 (44%), Gaps = 48/416 (11%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ AIKD V G GS + + A V+ LL GA +GKT LDEF
Sbjct: 61 PLAGVPIAIKDNISVVGLPNSCGSK--ILEGYVPPFNAHVIEKLLDAGAVILGKTNLDEF 118
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G + E +YG NP +PGGSS GSA VAA FALG+DT G VR PA+FCG
Sbjct: 119 AMGSSTETSYYGPTANPWDLERVPGGSSGGSAAVVAAGEAPFALGSDTGGSVRCPAAFCG 178
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
++G +P++G VS GV+ + SL+ VG LA N + +L+ + A RR I +
Sbjct: 179 VVGLKPTYGAVSRYGVVAYANSLEQVGPLANNVEDI----AILMDVIAGYDRRDSTSIDS 234
Query: 252 DDIFQLSKVPKLKTIHV-ISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRA--QSTSP 308
+Q + V +K + + + K + H V + + + + + L A Q S
Sbjct: 235 KTEYQKALVDDVKGLKIGVPKEF-----FGEGIHPGVEKAVWNAIHKFESLGATRQEVSM 289
Query: 309 ENGTATLKALSSVMLSL----------QRYEFKTIYEEW----VKSAKPRLGYNVFERVL 354
N L + + +S RY F+ E W K+ G V R+L
Sbjct: 290 PNINYALASYYIIAMSEASSNLARFDGTRYGFRANGENWHAMVSKTRAEGFGTEVKRRIL 349
Query: 355 EAINTTQDNIKILY-----KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAE 409
Y KVR ++ + L +L+ PT+ +P ++ K
Sbjct: 350 LGTYALSAGYHDKYYLKALKVRTLVKQDFDKALSTVDLLMAPTMPNPAFRIGEK------ 403
Query: 410 FHDR-TLVLSSIGS----MSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVL 460
D TL LS + + ++G V++P G + P+ + + G F TVL
Sbjct: 404 IEDPLTLYLSDVNTCPINLAGVPSVSVPCGFTDGLPVGLQIM----GKPFDEPTVL 455
>sp|Q2FQM9|GATA_METHJ Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanospirillum
hungatei (strain JF-1 / DSM 864) GN=gatA PE=3 SV=1
Length = 431
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 188/408 (46%), Gaps = 34/408 (8%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PL+G+ A+KD KG T S K + A VVTLL GA +GKT +DEF
Sbjct: 28 PLSGVTVAVKDNISTKGIETTCASKILK--GYIPPYDAHVVTLLKNAGAAIVGKTNMDEF 85
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
G T EN YG +NP +PGGSS GSA AVAA LVD A+G+DT G +R PA+FCG
Sbjct: 86 GMGTTTENSAYGPTLNPLDHQRVPGGSSGGSAAAVAAGLVDCAIGSDTGGSIRCPAAFCG 145
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL--------------LQL 237
I+G +P++G VS G++ + SL+ +G +AR+ L + V+ +
Sbjct: 146 IVGLKPTYGRVSRFGLIAYANSLEQIGPMARDVQTLSNLYSVIAGHDSRDATSVDKPYKH 205
Query: 238 NAVEPRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPS 297
N V ++ D+ F P + V+ +AI++L E M + +PS
Sbjct: 206 NPVSDITGLKIGVPDEFFGEGVNPNVA--EVVRQAIDTL------ESMGA-TAVPCTIPS 256
Query: 298 LK-GLRAQS-TSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLE 355
+K L A T ++ L V K+ ++ + + K G V R++
Sbjct: 257 MKYALSAYYVTCTSEASSNLARFDGVRYGPAVGTLKSWHDAYSEQRKAGFGKEVRRRIIL 316
Query: 356 AINTTQDNIKILY-----KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEF 410
+ Y R +R +R+ +D ++ PT+ D KL K +
Sbjct: 317 GTFSLAAGYYGRYYQKAQTARQMVRDDFERIFRDVDVIAGPTMPDIAFKLGEKSDPLQMY 376
Query: 411 HDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDT 458
L + + +++G +++P GK N P+ + I + D+ ++DT
Sbjct: 377 LSDILTVPA--NLAGVPALSVPCGKINSMPVGLQLIGRYFEDERIIDT 422
>sp|Q9JTZ5|GATA_NEIMA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Neisseria
meningitidis serogroup A / serotype 4A (strain Z2491)
GN=gatA PE=3 SV=1
Length = 481
Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 99/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGIPVAYKDIFCQTGWRSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL G +G+T +DEFA G T EN YG NP P H+PGG
Sbjct: 92 -MLDNFISPYTATVVQKLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNPEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQA 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>sp|A9M003|GATA_NEIM0 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Neisseria
meningitidis serogroup C (strain 053442) GN=gatA PE=3
SV=1
Length = 481
Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 99/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGIPVAYKDIFCQTGWRSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL G +G+T +DEFA G T EN YG NP P H+PGG
Sbjct: 92 -MLDNFISSYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGATKNPWNPEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQA 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>sp|B4RM85|GATA_NEIG2 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Neisseria
gonorrhoeae (strain NCCP11945) GN=gatA PE=3 SV=1
Length = 481
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 99/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL G +G+T +DEFA G T EN YG NP P H+PGG
Sbjct: 92 -MLDNFVSPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNPEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQA 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>sp|A1KUH8|GATA_NEIMF Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Neisseria
meningitidis serogroup C / serotype 2a (strain ATCC
700532 / FAM18) GN=gatA PE=3 SV=1
Length = 481
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 99/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL G +G+T +DEFA G T EN YG NP P H+PGG
Sbjct: 92 -MLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNPEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQA 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>sp|Q46E35|GATA_METBF Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina
barkeri (strain Fusaro / DSM 804) GN=gatA PE=3 SV=1
Length = 475
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 183/402 (45%), Gaps = 44/402 (10%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ AIKD V G GS + + A V+ LL GA +GKT +DEF
Sbjct: 60 PLAGVPIAIKDNISVVGLPNSCGSK--ILEDYIPPFNAYVIEKLLAAGAVILGKTNMDEF 117
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G + E ++G NP +PGGSS GSA VAA FALG+DT G VR PA+FCG
Sbjct: 118 AMGSSTETSYFGPTANPWDLERVPGGSSGGSAAVVAAGEAPFALGSDTGGSVRCPAAFCG 177
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFA 251
++G +P++G VS GV+ + SL+ VG LA N + + VL+ + A R+ I +
Sbjct: 178 VVGLKPTYGAVSRYGVVAYANSLEQVGPLANNVTDI----AVLMDVIAGYDRKDSTSIDS 233
Query: 252 DDIFQLSKVPKLKTIHV-ISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRA---QSTS 307
+Q + + +K + + + K + H +V + + + + + L A + +
Sbjct: 234 KTEYQKALIEDVKGLKIGVPKEF-----FGEGIHPDVEKAVWNAIHKCEDLGASWEEVSM 288
Query: 308 PENGTAT----LKALSSVMLSL-----QRYEFKTIYEEW----VKSAKPRLGYNVFERVL 354
P A + A+S +L RY ++ E W K+ G V R+L
Sbjct: 289 PHIKYALASYYIIAMSEASSNLARFDGTRYGYRASGENWHAMVSKTRAEGFGTEVKRRIL 348
Query: 355 EAINTTQDNIKILY-----KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAE 409
Y KVR ++ + L +L+ PT+ +P K+ K
Sbjct: 349 LGTYALSAGYHDKYYLKALKVRTLVKQDFDKALSKVDVLMAPTMPNPAFKIGEK------ 402
Query: 410 FHDR-TLVLSSIGS----MSGCCQVAIPIGKYNEHPISISFI 446
D TL LS + + ++G +++P G + PI + +
Sbjct: 403 IEDPLTLYLSDVNTCPINLAGVPSLSVPCGFTDGLPIGLQIM 444
>sp|Q5F8U8|GATA_NEIG1 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Neisseria
gonorrhoeae (strain ATCC 700825 / FA 1090) GN=gatA PE=3
SV=1
Length = 481
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 98/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ TA VV LL G +G+T +DEFA G T EN YG NP P H+PGG
Sbjct: 92 -MLDNFIFPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNPEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQA 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>sp|Q9JYZ9|GATA_NEIMB Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Neisseria
meningitidis serogroup B (strain MC58) GN=gatA PE=3 SV=1
Length = 481
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 98/187 (52%), Gaps = 2/187 (1%)
Query: 38 RRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPD 97
+NP LNG + E + L G+ A KD+F G+ + S
Sbjct: 33 EKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASK- 91
Query: 98 WKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGG 157
D+ + TA VV LL G +G+T +DEFA G T EN YG NP H+PGG
Sbjct: 92 -MLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNLEHVPGG 150
Query: 158 SSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTV 217
SS GSA VAA+L ALG+DT G +R PAS CGI G +P++GTVS G++ + S D
Sbjct: 151 SSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQT 210
Query: 218 GLLARNA 224
G +A+ A
Sbjct: 211 GPMAQTA 217
>sp|Q3ZYM5|GATA_DEHSC Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Dehalococcoides
sp. (strain CBDB1) GN=gatA PE=3 SV=1
Length = 486
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 89/154 (57%), Gaps = 2/154 (1%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
+PL G+ A+KDV KG T S ++ A VV L K GA +GKT +DE
Sbjct: 69 RPLTGIPMALKDVLCTKGIRTTCSSK--MLENFVPPYNAHVVDKLAKEGAVLLGKTNMDE 126
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FA G + EN Y T NP +PGGSS GSA VAA F+LG+DT G +R PASFC
Sbjct: 127 FAMGSSTENSAYFTTRNPWNTDKVPGGSSGGSAACVAASEAVFSLGSDTGGSIRQPASFC 186
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
+ GY+PS+G VS G++ + SLD +G ++A
Sbjct: 187 SVTGYKPSYGMVSRYGLVAFASSLDQIGPFTKDA 220
>sp|A5GTM0|GATA_SYNR3 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp.
(strain RCC307) GN=gatA PE=3 SV=1
Length = 485
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 98/173 (56%), Gaps = 10/173 (5%)
Query: 68 AARQ---PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIG 124
AA+Q PLAG+ IKD KG T S + E T V L K GA +G
Sbjct: 58 AAKQDPGPLAGVTIGIKDNLCTKGVTTTCSSRMLENFVPPYEST--VTERLWKAGAVMVG 115
Query: 125 KTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVR 184
KT LDEFA G + E +G NP P +PGGSS GSA VAA D ALG+DT G +R
Sbjct: 116 KTNLDEFAMGSSTETSAFGMTSNPWDPGRVPGGSSGGSAACVAAGQCDVALGSDTGGSIR 175
Query: 185 VPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLAR----NASILHRV-GH 232
PASFCG++G +P++G VS G++ + SLD +G +R +A++L + GH
Sbjct: 176 QPASFCGVVGLKPTYGRVSRWGLVAFASSLDQIGPFSRTVADSAAVLQVIAGH 228
>sp|P75534|GATA_MYCPN Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Mycoplasma
pneumoniae (strain ATCC 29342 / M129) GN=gatA PE=3 SV=1
Length = 478
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 94/160 (58%), Gaps = 2/160 (1%)
Query: 63 QPPPPAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATC 122
Q P ++ PL + F +KD KG VT GS + + +A V LL +GA
Sbjct: 50 QAPKNRSKSPLNNIPFVLKDNIATKGIVTTGGSR--FLEDYIPPFSATVFELLNNSGALL 107
Query: 123 IGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGC 182
+GK LDEF G TG + +G +P + IPGGSSSGSA AVA +V F++GTDT
Sbjct: 108 VGKANLDEFGLGGTGLHSGFGFVHHPWNETLIPGGSSSGSAYAVARGIVPFSIGTDTGDS 167
Query: 183 VRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLAR 222
VR PAS C I+G++P++G +S GV P + SLD VG+ AR
Sbjct: 168 VRRPASICNIVGFKPTYGLISRNGVYPYAPSLDHVGIFAR 207
>sp|A5FQ07|GATA_DEHSB Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Dehalococcoides
sp. (strain BAV1) GN=gatA PE=3 SV=1
Length = 486
Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 89/154 (57%), Gaps = 2/154 (1%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
+PL G+ A+KDV KG T S ++ A VV L K GA +GKT +DE
Sbjct: 69 RPLTGIPMALKDVLCTKGIRTTCSSK--MLENFVPPYNAHVVDKLAKEGAVLLGKTNMDE 126
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FA G + EN Y T NP +PGGSS GSA VAA F+LG+DT G +R PASFC
Sbjct: 127 FAMGSSTENSAYFTTRNPWNTDKVPGGSSGGSAACVAASEAVFSLGSDTGGSIRQPASFC 186
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
+ GY+PS+G VS G++ + SLD +G ++A
Sbjct: 187 SVTGYKPSYGMVSRYGLVAFASSLDQIGPFTKDA 220
>sp|C4ZHB9|GATA_EUBR3 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Eubacterium
rectale (strain ATCC 33656 / VPI 0990) GN=gatA PE=3 SV=1
Length = 503
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 103/205 (50%), Gaps = 33/205 (16%)
Query: 28 FVVLAETLRRRRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVK 87
FV + E ++ ++ ++D G + LAG+ AIKD +
Sbjct: 43 FVTIDEEGALKKAAEVQAKIDAGEL-----------------KGALAGVPVAIKDNMCTE 85
Query: 88 GYVTGFGS-------PDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENK 140
G +T S P + TA V L G +GKT +DEFA G T E
Sbjct: 86 GLLTTCSSKILYNFIPTY---------TAEAVKRLEDAGCVIVGKTNMDEFAMGSTTETS 136
Query: 141 HYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHG 200
+G NP H+PGGSS GS AVAA+ V FALG+DT G +R P+SFCG+ G +P++G
Sbjct: 137 AFGATKNPWNTEHVPGGSSGGSCAAVAAEEVPFALGSDTGGSIRQPSSFCGVTGIKPTYG 196
Query: 201 TVSMIGVLPNSQSLDTVGLLARNAS 225
TVS G++ SLD +G +A++ +
Sbjct: 197 TVSRYGLIAYGSSLDQIGPIAKDVT 221
>sp|Q1IUE4|GATA_KORVE Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Koribacter
versatilis (strain Ellin345) GN=gatA PE=3 SV=1
Length = 480
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 122/393 (31%), Positives = 171/393 (43%), Gaps = 41/393 (10%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAGL AIKDV KG T GS + A A VV L GA +GKT DEFA
Sbjct: 71 LAGLPVAIKDVISTKGVRTTAGSKIL--EEFIAPYDATVVQKLEAAGAVILGKTNCDEFA 128
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G + EN YG NP+ S +PGGSS GSA VAA +LG+DT G +R PASFCG+
Sbjct: 129 MGSSNENSAYGPVRNPRDKSRVPGGSSGGSAAVVAAGTAVTSLGSDTGGSIRQPASFCGV 188
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLA---RNASILHRV--GHVLLQLNAVE------ 241
+G P++G VS G++ + SLD +G A ++A+I+ V G + + E
Sbjct: 189 VGLMPTYGRVSRYGLIAFASSLDHIGPFAKDVKDAAIMLEVIAGRDPMDATSAEVAVPKY 248
Query: 242 ------PRRARRLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVG-QYIASN 294
P R ++ A + F P++K + +I++L+ E + V +
Sbjct: 249 SDEIGKPVRGMKIGVAKEYFGEGLDPEVKA--SVEASIQNLA-KAGAEIIEVSLPHTKYA 305
Query: 295 VPSLKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVL 354
+P+ L A + + N L V S + E KT+ E + KS G V R++
Sbjct: 306 IPTYY-LVATAEASSN----LARFDGVRYSHRSKEAKTLSEMYRKSRDEGFGAEVKRRII 360
Query: 355 EAINTTQDNIKILY-----KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTK-----K 404
Y KVR + +V PT P KL K
Sbjct: 361 LGTYALSAGYYDAYYLKAQKVRTLLAQDFDEAFAKVDAIVTPTTPTPAFKLGEKADDPLA 420
Query: 405 TYSAEFHDRTLVLSSIGSMS---GCCQVAIPIG 434
Y A+ T L I +S G + +PIG
Sbjct: 421 MYLADIFTVTADLVGIPGISVPCGSSKDGLPIG 453
>sp|Q5AK64|GATA_CANAL Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial
OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=HER2 PE=3 SV=1
Length = 450
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 108/178 (60%), Gaps = 4/178 (2%)
Query: 66 PPAARQPLAGLKFAIKD-VFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIG 124
P + PL+G + +KD + GY T ++E+ A+++ LL NG+ IG
Sbjct: 32 PTNSTGPLSGTTYIVKDNIATSHGYTTAASK---ILSNYESPFNAMIIDLLSSNGSKLIG 88
Query: 125 KTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVR 184
K+ LDEF G N ++ NP + +PGGSS GSA +VA ++ F++GTDT G VR
Sbjct: 89 KSNLDEFGMGSANYNSYFNKVTNPYDNTKVPGGSSGGSAASVAGKMCSFSIGTDTGGSVR 148
Query: 185 VPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
+PAS+C + G++P++G +S GV+P +Q+LDTVG++ N +I+ RV VL + + +P
Sbjct: 149 LPASYCNVFGFKPTYGRISRWGVIPYAQTLDTVGIIGENVNIIKRVYDVLNKYDDKDP 206
>sp|Q1J0C2|GATA_DEIGD Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Deinococcus
geothermalis (strain DSM 11300) GN=gatA PE=3 SV=1
Length = 483
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 96/163 (58%), Gaps = 2/163 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ +KD +V G T GS ++ + A V L GA IGK +DEF
Sbjct: 66 PLAGVPIVVKDNLNVIGTRTTCGSRILA--NYVSPYDATAVERLTGAGAVIIGKANMDEF 123
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G + E+ +G +NP +PGGSS GSAVAVAA L ALG+DT G VR PA+F G
Sbjct: 124 AMGSSTESSAWGPTLNPWDRERVPGGSSGGSAVAVAANLTPVALGSDTGGSVRQPAAFTG 183
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL 234
I G +P++G VS G++ + SLD +G AR+A+ L + +VL
Sbjct: 184 IYGLKPTYGRVSRYGLVAYASSLDQIGPFARSAADLALLMNVL 226
>sp|C4YRY0|GATA_CANAW Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial
OS=Candida albicans (strain WO-1) GN=HER2 PE=3 SV=1
Length = 450
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 107/178 (60%), Gaps = 4/178 (2%)
Query: 66 PPAARQPLAGLKFAIKD-VFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIG 124
P + PL+G + +KD + GY T ++E+ A ++ LL NG+ IG
Sbjct: 32 PTNSTGPLSGTTYIVKDNIATSHGYTTAASK---ILSNYESPFNATIIDLLSSNGSKLIG 88
Query: 125 KTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVR 184
K+ LDEF G N ++ NP + +PGGSS GSA +VA ++ F++GTDT G VR
Sbjct: 89 KSNLDEFGMGSANYNSYFNKVTNPYDNTKVPGGSSGGSAASVAGKMCSFSIGTDTGGSVR 148
Query: 185 VPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
+PAS+C + G++P++G +S GV+P +Q+LDTVG++ N +I+ RV VL + + +P
Sbjct: 149 LPASYCNVFGFKPTYGRISRWGVIPYAQTLDTVGIIGENVNIIKRVYDVLNKYDDKDP 206
>sp|Q5WVW0|GATA_LEGPL Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Legionella
pneumophila (strain Lens) GN=gatA PE=3 SV=1
Length = 483
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 184/406 (45%), Gaps = 28/406 (6%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
+PL G+ A+KD+F K T S + +A A +VT +NGA IGKT +DE
Sbjct: 65 KPLTGIPMALKDLFCTKRLNTTCASKMLA--NFQAPYDATIVTKFKQNGAIIIGKTNMDE 122
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FA G + EN ++G+ NP +PGGSS GSA AVA LV FA+G+DT G +R PA+FC
Sbjct: 123 FAMGSSNENSYFGSVKNPWDRERVPGGSSGGSAAAVAGSLVPFAIGSDTGGSIRQPAAFC 182
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI- 249
GI G +P++G VS G++ + SLD G A++A L + H + ++ + A R+I
Sbjct: 183 GISGIKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAMILHCIAGFDSKDSTSADRVIP 242
Query: 250 -FADDIFQ-LSKV----PKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRA 303
++ +I + + K+ P + K I+ N+G I L+ L
Sbjct: 243 DYSTEIKKPVDKIRIGLPSCFFQPQVEKGIQDAIHDAVKLFENLGAEIIEIDLKLQPLWV 302
Query: 304 QS---TSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTT 360
+ ++ L + + T+ E S G V R+L +
Sbjct: 303 PCYYVIACAEASSNLSRYDGIRFGHRSKSASTLIELITNSRSEGFGNEVKRRILTGTHVL 362
Query: 361 QDNIKILY-----KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTK-----KTYSAEF 410
Y KVR +R L +L +++ PT KL K + Y A+
Sbjct: 363 SSGFFDAYYLHAQKVRRLIRDELITILNSVDVILGPTTPTTAFKLGEKIDDPIQNYLAD- 421
Query: 411 HDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
V + +++G ++IP G N+ PI + + H + LL
Sbjct: 422 -----VFTVAANLAGLPAISIPTGFENKLPIGLQLMGKHFSENRLL 462
>sp|A5ICP2|GATA_LEGPC Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Legionella
pneumophila (strain Corby) GN=gatA PE=3 SV=1
Length = 483
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 179/407 (43%), Gaps = 30/407 (7%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
+PL G+ A+KD+F K T S + +A A +VT +NGA IGKT +DE
Sbjct: 65 KPLTGIPMALKDLFCTKRLNTTCASKMLA--NFQAPYDATIVTKFKQNGAIIIGKTNMDE 122
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FA G + EN ++G+ NP +PGGSS GSA AVA LV FA+G+DT G +R PA+FC
Sbjct: 123 FAMGSSNENSYFGSVKNPWDRERVPGGSSGGSAAAVAGNLVPFAIGSDTGGSIRQPAAFC 182
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIF 250
GI G +P++G VS G++ + SLD G A++A L + H + ++ + R+I
Sbjct: 183 GISGIKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAMILHCIAGFDSKDSTSVDRVI- 241
Query: 251 ADDIFQLSK--------VPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLR 302
D ++ K +P + K I+ N+G I L+ L
Sbjct: 242 PDYSAEIKKPVDKIRIGLPSCFFQPQVEKGIQDAIHDAVKLFENLGAEIIEIDLKLQPLW 301
Query: 303 AQS---TSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINT 359
+ ++ L + + T+ E S G V R+L +
Sbjct: 302 VPCYYVIACAEASSNLSRYDGIRFGHRSKSASTLIELITNSRSEGFGNEVKRRILTGTHV 361
Query: 360 TQDNIKILY-----KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTK-----KTYSAE 409
Y KVR +R L L +++ PT KL K + Y A+
Sbjct: 362 LSTGFFNAYYLHAQKVRRLIRDELITTLNSVDVIIGPTTPTTAFKLGEKINDPIQNYLAD 421
Query: 410 FHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
V + +++G ++IP G N+ PI + + H + LL
Sbjct: 422 ------VFTVAANLAGLPAISIPTGFENKLPIGLQLMGKHFSESRLL 462
>sp|Q5X4H5|GATA_LEGPA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Legionella
pneumophila (strain Paris) GN=gatA PE=3 SV=1
Length = 483
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 178/407 (43%), Gaps = 30/407 (7%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
+PL G+ A+KD+F K T S + +A A +VT +NGA IGKT +DE
Sbjct: 65 KPLTGIPMALKDLFCTKRLNTTCASKMLA--NFQAPYDATIVTKFKQNGAIIIGKTNMDE 122
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FA G + EN ++G+ NP +PGGSS GSA AVA LV FA+G+DT G +R PA+FC
Sbjct: 123 FAMGSSNENSYFGSVKNPWDRERVPGGSSGGSAAAVAGNLVPFAIGSDTGGSIRQPAAFC 182
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIF 250
GI G +P++G VS G++ + SLD G A++A L + H + ++ + R+I
Sbjct: 183 GISGIKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAMILHCIAGFDSKDSTSVDRVI- 241
Query: 251 ADDIFQLSK--------VPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLR 302
D ++ K +P + K I+ N+G I L+
Sbjct: 242 PDYSAEIKKPVDKIRIGLPSCFFQPQVEKGIQDAIHNAVKLFENLGAEIIEIDLKLQPFW 301
Query: 303 AQS---TSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINT 359
+ ++ L + + T+ E S G V R+L +
Sbjct: 302 VPCYYVIACAEASSNLSRYDGIRFGHRSKSASTLIELITNSRSEGFGNEVKRRILTGTHV 361
Query: 360 TQDNIKILY-----KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTK-----KTYSAE 409
Y KVR +R L L +++ PT KL K + Y A+
Sbjct: 362 LSSGFFDAYYLHAQKVRRLIRDELITTLNSVDVILGPTTPTTAFKLGEKINDPIQNYLAD 421
Query: 410 FHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
V + +++G ++IP G N+ PI + + H + LL
Sbjct: 422 ------VFTVAANLAGLPAISIPTGFENKLPIGLQLMGKHFSESRLL 462
>sp|Q5ZUQ7|GATA_LEGPH Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Legionella
pneumophila subsp. pneumophila (strain Philadelphia 1 /
ATCC 33152 / DSM 7513) GN=gatA PE=3 SV=1
Length = 483
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 181/406 (44%), Gaps = 28/406 (6%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
+PL G+ A+KD+F K T S + +A A +VT +NGA IGKT +DE
Sbjct: 65 KPLTGIPMALKDLFCTKRLNTTCASKMLA--NFQAPYDATIVTKFKQNGAIIIGKTNMDE 122
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FA G + EN ++G+ NP + GGSS GSA AVA LV FA+G+DT G +R PA+FC
Sbjct: 123 FAMGSSNENSYFGSVKNPWDRERVSGGSSGGSAAAVAGNLVPFAIGSDTGGSIRQPAAFC 182
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLI- 249
GI G +P++G VS G++ + SLD G A++A L + H + ++ + R+I
Sbjct: 183 GISGIKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAMILHCMAGFDSKDSTSVDRVIP 242
Query: 250 -FADDIFQ-LSKV----PKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRA 303
++ +I + K+ P + K I+ N+G I L+ L
Sbjct: 243 DYSAEIKNPVDKIRIGLPSCFFQPQVEKGIQDAIHDAVKLFENLGAEIIEIDLKLQPLWV 302
Query: 304 QS---TSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLEAINTT 360
+ ++ L + + T+ E S G V R+L +
Sbjct: 303 PCYYVIACAEASSNLSRYDGIRFGHRSKSASTLIELITNSRSEGFGNEVKRRILTGTHVL 362
Query: 361 QDNIKILY-----KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTK-----KTYSAEF 410
Y KVR +R L L +++ PT KL K + Y A+
Sbjct: 363 SSGFFDAYYLHAQKVRRLIRDELITTLNSVDVILGPTTPTTAFKLGEKIDDPIQNYLAD- 421
Query: 411 HDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL 456
V + +++G V+IP G N+ PI + ++ H + LL
Sbjct: 422 -----VFTVAANLAGLPAVSIPTGFENKLPIGLQLMSKHFSENRLL 462
>sp|Q97ZG1|GATA_SULSO Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Sulfolobus
solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 /
P2) GN=gatA-2 PE=3 SV=1
Length = 478
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 189/411 (45%), Gaps = 43/411 (10%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAG+ AIKD +G T S + + A V+ L K GA IGKT +DEFA
Sbjct: 64 LAGVLIAIKDNISTEGIRTTCASK--MLEDYIPPYDATVIEKLKKEGAVIIGKTNMDEFA 121
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G T E ++G NP PGGSS GS A+AA V+ ALG+DT G +R PA++ I
Sbjct: 122 MGSTTETSYFGPTRNPWDLERTPGGSSGGSGAALAAGYVELALGSDTGGSIRAPAAYNAI 181
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL------------LQLN-A 239
G +PS+GTVS G++ + SL+ +G +ARNA L + ++ L LN
Sbjct: 182 FGLKPSYGTVSRFGLVAYANSLEQIGPMARNAEDLGLLFSIIAGPDERDATTINLNLNFE 241
Query: 240 VEPRRAR--RLIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPS 297
++ R + R+ DI ++S+ P I + + S + +Y +P+
Sbjct: 242 LKERSVKNVRIGVLSDILEMSEKPVSGVIKDVVNKLSSEGALIEDTKLGNAEYA---LPA 298
Query: 298 LKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFER----- 352
+ A S + N L V +Y E + K+ G V R
Sbjct: 299 YY-IIAMSEASSN----LARYDGVRYGYSKYMEGNWREVYAKNRGEAFGMEVKRRILLGS 353
Query: 353 -VLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKL-----NTKKTY 406
+L A + +K L KVRN ++ L L K IL+ PT+ P K+ + + Y
Sbjct: 354 FILSAGYYEEFYLKAL-KVRNLIKKNLDELFKKYDILLSPTMPILPPKIGEVINDPVRMY 412
Query: 407 SAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLD 457
+ + + + I +++ +++P+G Y++ PI + + + D +L++
Sbjct: 413 AMDLN------TVIANLAAIPALSMPVGFYSDLPIGLQLMGKYLSDIYLIN 457
>sp|Q58560|GATA_METJA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=gatA PE=3 SV=1
Length = 434
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 120/397 (30%), Positives = 180/397 (45%), Gaps = 47/397 (11%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
A ++PL G +K +V+GY S +++ A A V+ + +NG IG
Sbjct: 44 AKKKPLYGKIIVVKANINVEGYTISCASKTL--ENYIAPYDATVIEKIKENGGLIIGIAN 101
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
+DEFA G +GE ++G NP+ IPGGSSSGSA AV+A L D ALG+DT G +R PA
Sbjct: 102 MDEFACGSSGETSYFGPTKNPRAKDRIPGGSSSGSAAAVSADLCDMALGSDTGGSIRNPA 161
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARR 247
S CG++G++PS+G VS G+ + S D +G L + A LL N ++ + R
Sbjct: 162 SHCGVVGFKPSYGVVSRYGLCDLAMSFDQIGPLTKTAE------DALLLTNIIKGKDLR- 214
Query: 248 LIFADDIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVG-QYIASNVPSLKGLRAQST 306
D + P K K I+ E M+V + I V +A
Sbjct: 215 -----DTTTVETKPFEK------KDIKGFKVGVVKEFMDVADEKIRDKVE-----KAIEV 258
Query: 307 SPENGTATLK-ALSSVMLSLQRYEFKTIYEEWVKSAK----PRLGYNVFE--------RV 353
+ G ++ + V L+L Y + Y E+ S + R GY + E R+
Sbjct: 259 FKDLGCEIVELSYKYVDLALPTY-YLINYVEFFSSTRRYDGRRYGYKIEEVCGEEVLRRI 317
Query: 354 LEAINTTQDNIKILY-----KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSA 408
+ +Q Y K RN MR + +++KD I+V TV P KL K T
Sbjct: 318 MIGSMISQKEYSGKYYKNALKARNLMRNEMIKIMKDVDIIVGATVPKLPHKLGEKLT-PM 376
Query: 409 EFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISF 445
E + VL+ ++ G C +P G N P+ +
Sbjct: 377 EMYSYD-VLTVPANICGLCAGVVPCGDINGIPVGLQI 412
>sp|Q03557|GATA_YEAST Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=HER2 PE=1 SV=1
Length = 464
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 105/178 (58%), Gaps = 5/178 (2%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
++ L G +IKD K + T S ++ ++ A VV LL + G +GKT
Sbjct: 39 GTKETLTGCVASIKDNIVTKDFPTTCAS--HILENFKSPFDATVVKLLKQAGVHILGKTN 96
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSH---IPGGSSSGSAVAVAAQLVDFALGTDTIGCVR 184
LDEF G G + G +NP P I GGSSSG+A +VA LVDFALGTDT G VR
Sbjct: 97 LDEFGMGSGGVHSIRGPVINPLYPHEDKKIMGGSSSGAAASVACDLVDFALGTDTGGSVR 156
Query: 185 VPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEP 242
+PA + +LG++PS+G +S GV+ SQSLDTVG+L++ ++L +V H L + + +P
Sbjct: 157 LPACYGSVLGFKPSYGRLSRFGVIAYSQSLDTVGILSKKINVLRKVFHTLDKYDMKDP 214
>sp|Q971U6|GATA_SULTO Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Sulfolobus
tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 /
7) GN=gatA PE=3 SV=2
Length = 472
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 194/424 (45%), Gaps = 50/424 (11%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
L+G+ AIKD KG T S + + A V+ L + GA +GKT +DEFA
Sbjct: 61 LSGILIAIKDNISTKGIRTTCAS--RMLEDYVPPYDATVIEKLKQEGAVILGKTNMDEFA 118
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G T E ++G NP PGGSS GS A+AA +VD ALG+DT G +R PA++ +
Sbjct: 119 MGSTTETSYFGPTRNPWDLERTPGGSSGGSGAALAAGIVDIALGSDTGGSIRAPAAYNAV 178
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNA-------VEPRRA 245
G +PS+GTVS G++ + SL+ +G +A+NA L + ++ + EP+
Sbjct: 179 FGLKPSYGTVSRFGLVAYANSLEQIGPMAKNAEDLALLYSIISGDDPKDATTIHFEPQVP 238
Query: 246 RRLIFAD-------DIFQLSKVPKLKTIHVISKAIESLSGYQN-PEHMNVGQYIASNVPS 297
++ D DI + S P + + + ++ LS + +N+G Y +P+
Sbjct: 239 EKVELKDVKIAVLKDIVEASDKP---VVSIFNSTLDKLSSEGAIIKEVNLG-YAEYALPA 294
Query: 298 LKGLRAQSTSPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFER----- 352
+ S + L V +Y E + K+ G V R
Sbjct: 295 YYIIAMSEAS-----SNLARFDGVRYGYSKYSEGNWRETFAKNRGEGFGIEVKRRILLGS 349
Query: 353 -VLEAINTTQDNIKILYKVRNEMRAALQRLLKDDKILVIPTVSDPPLKL-----NTKKTY 406
+L A + IK L K+R ++ + +LK+ ++ PT+ P K+ + K Y
Sbjct: 350 FILSAGYYEEFYIKAL-KIRRLIKDNVDNILKEFDLIASPTMPILPPKIGEVVEDPIKMY 408
Query: 407 SAEFHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLL------DTVL 460
+ + + + I +++G ++ P G YN PI + + + D +++ + VL
Sbjct: 409 AMDLN------TVIANLAGVPALSQPAGFYNNLPIGLQLMGRYLSDYYIMAISAKIEKVL 462
Query: 461 DLYD 464
+LYD
Sbjct: 463 NLYD 466
>sp|Q2YC91|GATA_NITMU Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Nitrosospira
multiformis (strain ATCC 25196 / NCIMB 11849) GN=gatA
PE=3 SV=2
Length = 483
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 98/169 (57%), Gaps = 2/169 (1%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
QPL G+ A KD+F KG++T GS + + A V+ GA IGKT +DE
Sbjct: 66 QPLTGVPIAQKDIFCTKGWLTTCGSK--MLSNFISPYDAHVIGRFNAVGAVNIGKTNMDE 123
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FA G + E YG NP + +PGGSS GSA AVAA++ A GTDT G +R PA+ C
Sbjct: 124 FAMGSSNETSFYGPVKNPWDTAAVPGGSSGGSACAVAARMAPAATGTDTGGSIRQPAALC 183
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNA 239
GI G +P++G VS G++ + SLD G +A++A L + +V+ +A
Sbjct: 184 GISGLKPTYGLVSRYGMIAFASSLDQGGPMAKSAEDLGLMLNVMAGFDA 232
>sp|Q2S4S2|GATA_SALRD Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Salinibacter ruber
(strain DSM 13855 / M31) GN=gatA PE=3 SV=1
Length = 514
Score = 105 bits (262), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 94/157 (59%), Gaps = 8/157 (5%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGS---PDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
+PLAGL A+KD ++GY GS D+ + A V+ L GA IGKT
Sbjct: 66 RPLAGLVLAVKDNICIRGYPVSCGSKMLADFSSLYD-----ATVIDRLRDAGAIFIGKTN 120
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
DEFA G + E H+G NP P ++PGGSS GSA AVAA L ALG+DT G VR PA
Sbjct: 121 CDEFAMGSSNETSHFGPVRNPHAPEYVPGGSSGGSAAAVAAGLCHAALGSDTGGSVRQPA 180
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
+FCG +G +P++G VS G++ + SLD +G L R+A
Sbjct: 181 AFCGTVGLKPTYGRVSRSGLVAFASSLDVIGPLTRSA 217
>sp|C6BSE9|GATA_DESAD Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulfovibrio
salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 /
VKM B-1763) GN=gatA PE=3 SV=1
Length = 487
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/168 (42%), Positives = 91/168 (54%), Gaps = 2/168 (1%)
Query: 67 PAARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKT 126
P A +PL G+ IKD G T GS + + TAV L + GA +GK
Sbjct: 64 PDASKPLWGVPVVIKDALATNGIPTTAGSKILEGFTPFYDSTAVAK--LKEAGAIIVGKA 121
Query: 127 VLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVP 186
+DEFA G T EN Y T NP S +PGGSS GS VAA ALGTDT G +R+P
Sbjct: 122 NMDEFAMGSTTENSAYQTTTNPWDASRVPGGSSGGSGATVAAGQCYAALGTDTGGSIRLP 181
Query: 187 ASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVL 234
ASFCG +G +P++G VS G++ SLD +G + R RV +V+
Sbjct: 182 ASFCGCVGVKPTYGRVSRYGMIAYGSSLDQIGPMTRTVEDAARVLNVI 229
>sp|B2A5W7|GATA_NATTJ Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Natranaerobius
thermophilus (strain ATCC BAA-1301 / DSM 18059 /
JW/NM-WN-LF) GN=gatA PE=3 SV=1
Length = 491
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 202/426 (47%), Gaps = 38/426 (8%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGS---PDWKRDHHEAERTAVVVTLLLKNGATCIGKTVL 128
PLAG+ AIKD K T S D+ ++ A V++ L + GA +GKT +
Sbjct: 70 PLAGIPVAIKDNICTKDVTTSCASKILEDFVPPYN-----ATVISKLAEAGAIIVGKTNM 124
Query: 129 DEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPAS 188
DEFA G + EN + NP +PGGSS GSA +VA+ V ALG+DT G +R PAS
Sbjct: 125 DEFAMGSSTENSAFFVTSNPWDTERVPGGSSGGSAASVASAQVPLALGSDTGGSIRQPAS 184
Query: 189 FCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN----ASILHRV-GHVLLQLNAVEPR 243
FCG++G +P++G VS G++ + SLD +G L++N A L + GH + +V+
Sbjct: 185 FCGVVGMKPTYGRVSRYGLVAFASSLDQIGPLSKNVEDTALALDIISGHDHMDSTSVDLE 244
Query: 244 RARRLIFAD-DIFQLS-KVPKLKTIHVISKAIESL--SGYQNPEHMNVGQYIASNVPSLK 299
F + DI +L+ +PK + ++ ++SL S Q+ E G Y ++P+ +
Sbjct: 245 VPNHTDFLNQDIDELTIGIPK-EYYELVDNDVKSLVESSLQSIEP-EAGNYRQVSLPTTE 302
Query: 300 -GLRAQS-TSPENGTATLKALSSVMLSLQRY---EFKTIYEEWVKSAKPRLGYNVFERV- 353
L A +P ++ L V QR+ + KT+Y + K G V +RV
Sbjct: 303 HALSAYYLIAPAEASSNLARFDGVRYG-QRFATDDLKTMYNQTRKEG---FGNEVKQRVM 358
Query: 354 LEAINTTQDNIKILY----KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAE 409
L + LY KVR+ ++ +++ + +L+ PT P +
Sbjct: 359 LGTYALSAGYYDALYLKALKVRSLIKQEFEQVFSECDVLIAPTTPTVPFREGENVDDPLT 418
Query: 410 FHDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQ 469
+ + + + +++G ++IP G N P+ + I G F V+ + +++
Sbjct: 419 MYKNDICTAPV-NLAGLPSISIPCGFSNGLPVGLQVI----GKAFDEGKVIQVAHKIEQM 473
Query: 470 VNIASN 475
+ + N
Sbjct: 474 LQVFKN 479
>sp|Q2NHN5|GATA_METST Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=gatA PE=3 SV=1
Length = 455
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 90/153 (58%), Gaps = 2/153 (1%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAGL IK +V+ ++ SP K ++ A V+ +L IG T +DEFA
Sbjct: 66 LAGLVIGIKSNINVEDFIISAASPTLK--NYYGSYNATVINRILDEDGVIIGLTNMDEFA 123
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G + E YG NP+ P HIPGGSS GSA A+AA + D LG+DT G +R PAS CG+
Sbjct: 124 AGSSTETSMYGPTNNPKAPGHIPGGSSGGSAAAIAANMCDITLGSDTGGSIRNPASHCGV 183
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNAS 225
+G++P++G VS G+L + SLD +G A + +
Sbjct: 184 MGFKPTYGMVSRQGLLDLAMSLDQIGPFANDTT 216
>sp|A5EY31|GATA_DICNV Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Dichelobacter
nodosus (strain VCS1703A) GN=gatA PE=3 SV=1
Length = 487
Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 92/157 (58%), Gaps = 2/157 (1%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA PL G+ KD+F KG T GS +R TA VV L G+ GK
Sbjct: 67 AAHSPLDGIPMGHKDLFCTKGIATTAGSKMLER--FIPSYTATVVARLEAAGSVLTGKLS 124
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
+DEFA G + E ++G NP IPGGSS GSA AVAA+L+ +A G+DT G VR PA
Sbjct: 125 MDEFAMGSSNERSYFGAVYNPWDEQRIPGGSSGGSAAAVAARLIPYATGSDTGGSVRQPA 184
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
++CGI G +P++GT S G++ + SLD G+LA+ A
Sbjct: 185 AYCGITGIKPTYGTCSRWGMIAYASSLDQAGVLAKTA 221
>sp|Q6C0M4|GATA_YARLI Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial
OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=HER2
PE=3 SV=1
Length = 459
Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 105/195 (53%), Gaps = 20/195 (10%)
Query: 58 LIPFPQPPPPAARQPLAGLKFAIKD--------VFDVKGYVTGFGSPDWKRDHHEAERTA 109
LI + P A LAG+ A+KD G + F SP A
Sbjct: 14 LISTAENPQVAQSGALAGIALAVKDNICTNEMHTTCASGILETFTSP----------FDA 63
Query: 110 VVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPS--HIPGGSSSGSAVAVA 167
VV LL + G + +GK LDEF G N +G NP P H PGGSS GSA AVA
Sbjct: 64 TVVDLLKQEGVSIVGKANLDEFGMGSDNANSWFGPVFNPLYPDEPHTPGGSSGGSAAAVA 123
Query: 168 AQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASIL 227
A + FALGTDT G VR PA+ C ++G +PS+G +S GV+ +QSLDTVG+L ++ +L
Sbjct: 124 ADMCHFALGTDTGGSVRYPAAQCSVIGLKPSYGLISRHGVIAYAQSLDTVGILTKDIDLL 183
Query: 228 HRVGHVLLQLNAVEP 242
+V ++L + + ++P
Sbjct: 184 EKVFNILNKYDPLDP 198
>sp|A6VH97|GATA_METM7 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=gatA PE=3
SV=1
Length = 431
Score = 102 bits (254), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
+PL G A+K +VKGY S D++ A VV L GA +G T +DE
Sbjct: 45 KPLYGKIVAVKSNINVKGYKISCASKTL--DNYIGTYDATVVKKLRSQGALIVGMTNMDE 102
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FA G +GE ++G NP IPGGSSSGSA AVAA L D A+G+DT G +R PAS C
Sbjct: 103 FASGSSGETSYFGPTKNPAAMDRIPGGSSSGSAAAVAADLCDMAIGSDTGGSIRNPASHC 162
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
GI+G++PS+G VS G+ + S D +G L +NA
Sbjct: 163 GIVGFKPSYGVVSRQGLCDLAMSFDQIGPLTKNA 196
>sp|Q8R679|GATA_FUSNN Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Fusobacterium
nucleatum subsp. nucleatum (strain ATCC 25586 / CIP
101130 / JCM 8532 / LMG 13131) GN=gatA PE=3 SV=1
Length = 487
Score = 102 bits (254), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 194/420 (46%), Gaps = 37/420 (8%)
Query: 73 LAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFA 132
LAG+ AIKD ++G + S +++ A VV L + A IG T +DEFA
Sbjct: 74 LAGIPIAIKDNILMEGQKSTSCSKIL--ENYIGIYDATVVKKLKEEDAIIIGITNMDEFA 131
Query: 133 FGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGI 192
G T + + NP + +PGGSS G+A +VAAQ V +LG+DT G VR PASFCG+
Sbjct: 132 MGSTTKTSFHHKTSNPWDLNRVPGGSSGGAAASVAAQEVPISLGSDTGGSVRQPASFCGV 191
Query: 193 LGYRPSHGTVSMIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRRARRLIFAD 252
+G++P++G VS G++ + SLD +G LA+ + +V+ ++ + +++ +
Sbjct: 192 VGFKPTYGRVSRYGLMAFASSLDQIGTLAKTVEDIAICMNVIAGVDDYDATVSKKEVPDY 251
Query: 253 DIFQLSKVPKLKTIHVISKAIESLSGYQNPEHMNVGQYIASNVPSLKGLRAQST------ 306
F + LK IE L NPE NV + ++V +LK L A+
Sbjct: 252 TEFLNKDIKGLKIGLPKEYFIEGL----NPEIKNV---VDNSVKALKELGAEVVEISLPH 304
Query: 307 -----------SPENGTATLKALSSVMLSLQRYEFKTIYEEWVKSAKPRLGYNVFERVLE 355
+P ++ L + + ++ + +VK+ G V R++
Sbjct: 305 TKYAVPTYYVLAPAEASSNLARFDGIRYGYRAKDYTDLESLYVKTRSEGFGAEVKRRIMI 364
Query: 356 AINTTQDNIKILY-----KVRNEMRAALQRLLKDDKILVIPTVSDPPLKLNTKKTYSAEF 410
Y KVR ++ + +L + +++ P KL+ KT +
Sbjct: 365 GTYVLSAGFYDAYFKKAQKVRTLIKQDFENVLNEVDVILTPVAPSVAFKLSDTKTPIELY 424
Query: 411 HDRTLVLSSIGSMSGCCQVAIPIGKYNEHPISISFITYHGGDKFLLDTVLDLYDSLQEQV 470
+ +S+ +++G +++P G + P+ + F+ G F + ++ + D+L++++
Sbjct: 425 LEDIFTISA--NLAGVPAISLPGGLVDNLPVGVQFM----GKPFDEEILIKIADALEKKI 478
>sp|C4Z3J4|GATA_EUBE2 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Eubacterium
eligens (strain ATCC 27750 / VPI C15-48) GN=gatA PE=3
SV=1
Length = 481
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAG+ FAIKD +G +T S + TA V L GA IGKT +DEF
Sbjct: 70 PLAGVPFAIKDNMCTEGMLTTCSSKILG--NFVPTYTADAVERLQNAGAVIIGKTNMDEF 127
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A G T E +G NP+ P H+PGGSS GSA AVAA ALG+DT G +R PAS+CG
Sbjct: 128 AMGSTTETSAFGATKNPRNPEHVPGGSSGGSAAAVAANECFAALGSDTGGSIRQPASYCG 187
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNAS 225
++G +P++GTVS G++ SLD +G L ++ +
Sbjct: 188 VVGLKPTYGTVSRYGLIAYGSSLDQIGPLCKDVT 221
>sp|Q6MDF5|GATA_PARUW Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Protochlamydia
amoebophila (strain UWE25) GN=gatA PE=3 SV=1
Length = 489
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 102/183 (55%), Gaps = 9/183 (4%)
Query: 50 GAFLERFELIPFPQPP----PPAARQPL---AGLKFAIKDVFDVKGYVTGFGSPDWKRDH 102
GAFL +E Q A QPL AG+ AIKD VKG ++ GS +
Sbjct: 39 GAFLSVYEEQAMMQAKQLDQKRLANQPLGKLAGIPIAIKDNILVKGEISTCGSKFLT--N 96
Query: 103 HEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGS 162
++ A V+ LL GA IGKT +DEFA G + EN NP PGGSS GS
Sbjct: 97 FKSPYQASVIEYLLAEGAVIIGKTNMDEFAMGSSTENSALQKTSNPWNLKCTPGGSSGGS 156
Query: 163 AVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLAR 222
A AVA +L +LG+DT G VR+PASFCG++G++P++G VS G++ SLD +G LA
Sbjct: 157 AAAVAGRLSPLSLGSDTGGSVRLPASFCGVVGFKPTYGRVSRFGLVAYGSSLDQIGPLAT 216
Query: 223 NAS 225
N +
Sbjct: 217 NTA 219
>sp|A0LP22|GATA_SYNFM Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB) GN=gatA PE=3 SV=1
Length = 486
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 117/221 (52%), Gaps = 10/221 (4%)
Query: 24 SVVGFVVLAETLRRRRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDV 83
++ F+ ETL +P+LN + A E F + PLAG+ AIKDV
Sbjct: 25 TLTSFLTRIETL----DPRLNSYLSVLAESSLAEAGRFDRGERDLHASPLAGIPLAIKDV 80
Query: 84 FDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYG 143
++G VT GS ++ V+ L + GA +GKT +DEFA G + EN YG
Sbjct: 81 LCMQGTVTTCGS--RILENFVPPYDGTVIARLREAGAIFLGKTNMDEFAMGSSTENSAYG 138
Query: 144 TPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVS 203
NP +PGGSS GSA AVAA L +LGTDT G +R PASFCG++G +P++G VS
Sbjct: 139 VTRNPWDRERVPGGSSGGSAAAVAADLCSGSLGTDTGGSIRQPASFCGVVGLKPTYGRVS 198
Query: 204 MIGVLPNSQSLDTVGLLARNASILHRVGHVLLQLNAVEPRR 244
G++ + SLD +G + ++ +LLQ A RR
Sbjct: 199 RFGLVAFASSLDQIGPITKDVED----AAILLQAIAGHDRR 235
>sp|C0R074|GATA_BRAHW Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Brachyspira
hyodysenteriae (strain ATCC 49526 / WA1) GN=gatA PE=3
SV=1
Length = 482
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 101/179 (56%), Gaps = 8/179 (4%)
Query: 51 AFLERFELIPFPQPPPPAAR------QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHE 104
A+LE F+ Q R PL G+ AIKD K ++ S + ++
Sbjct: 45 AYLEIFKEEALEQAKKAQERINNGEDLPLLGVPLAIKDNLCYKDHLMTASSKML--EGYK 102
Query: 105 AERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAV 164
A TA V L+ NGA IG+T +DEFA G T E +YG NP+ +H+PGGSS GSA
Sbjct: 103 APYTAPTVQRLIDNGAIIIGRTNMDEFAMGGTTETSNYGVTRNPKNRAHVPGGSSGGSAA 162
Query: 165 AVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLARN 223
AVAA ALG+DT G +R PASFCGI+G +P++G V +G + + SLD VG L ++
Sbjct: 163 AVAANFAFGALGSDTGGSIRQPASFCGIVGVKPTYGRVPRLGCIAMASSLDQVGPLTKD 221
>sp|A9A9F2|GATA_METM6 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=gatA PE=3
SV=1
Length = 431
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 91/155 (58%), Gaps = 2/155 (1%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
+PL G A+K +VKGY S ++ + A VV L GA +G T +DE
Sbjct: 45 KPLYGKIVAVKSNINVKGYKISCASKTLEK--YTGTYDATVVKKLRLQGALIVGMTNMDE 102
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FA G +GE ++G NP IPGGSSSGSA AVAA L D A+G+DT G +R PAS C
Sbjct: 103 FASGSSGETSYFGPTKNPAAMDRIPGGSSSGSAAAVAADLCDMAIGSDTGGSIRNPASHC 162
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNAS 225
GI+G++PS+G VS G+ + S D +G L +NA
Sbjct: 163 GIVGFKPSYGVVSRQGLCDLAMSFDQIGPLTKNAE 197
>sp|Q9HR43|GATA_HALSA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Halobacterium
salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
GN=gatA PE=3 SV=1
Length = 423
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 89/154 (57%), Gaps = 2/154 (1%)
Query: 68 AARQPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTV 127
AA PL G A+KD KG T GS +E A VV LL G T +GKT
Sbjct: 15 AADGPLDGTTVAVKDNISTKGVPTTCGSKMLA--DYEPPYNATVVEDLLAAGGTIVGKTN 72
Query: 128 LDEFAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPA 187
+DEF G T E ++G NP + +PGGSS GSA AVA D ALG+DT G VR PA
Sbjct: 73 MDEFGMGTTTETSYFGPTKNPVDETRVPGGSSGGSAAAVANGDADLALGSDTGGSVRAPA 132
Query: 188 SFCGILGYRPSHGTVSMIGVLPNSQSLDTVGLLA 221
++CG++G +P++G VS G++ + SL+ +G +A
Sbjct: 133 AYCGVVGLKPTYGLVSRYGLVAYANSLEQIGPIA 166
>sp|Q936X3|ATZE_PSESD Biuret hydrolase OS=Pseudomonas sp. (strain ADP) GN=atzE PE=1 SV=1
Length = 457
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/150 (46%), Positives = 89/150 (59%), Gaps = 1/150 (0%)
Query: 72 PLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEF 131
PLAGL +A+K++FD++G T GS R A AV+V L GA +G +DEF
Sbjct: 65 PLAGLPYAVKNLFDIEGVTTLAGS-KINRTLPPARADAVLVQRLKAAGAVLLGGLNMDEF 123
Query: 132 AFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCG 191
A+G T EN HYG NP I GGSS GS A+AA V +LG+DT G +RVPAS CG
Sbjct: 124 AYGFTTENTHYGPTRNPHDTGRIAGGSSGGSGAAIAAGQVPLSLGSDTNGSIRVPASLCG 183
Query: 192 ILGYRPSHGTVSMIGVLPNSQSLDTVGLLA 221
+ G +P+ G +S G P S+D +G LA
Sbjct: 184 VWGLKPTFGRLSRRGTYPFVHSIDHLGPLA 213
>sp|Q6LX43|GATA_METMP Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanococcus
maripaludis (strain S2 / LL) GN=gatA PE=3 SV=1
Length = 431
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 90/154 (58%), Gaps = 2/154 (1%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
+PL G A+K +VKGY S ++ + A VV L GA +G T +DE
Sbjct: 45 KPLYGKIVAVKSNINVKGYKISCASKTLEK--YVGTYDATVVKKLRSQGALIVGMTNMDE 102
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FA G +GE YG NP IPGGSSSGSA AVAA L D A+G+DT G +R PAS C
Sbjct: 103 FAGGSSGETSCYGPTKNPAAMDRIPGGSSSGSAAAVAADLCDMAIGSDTGGSIRNPASHC 162
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
GI+G++PS+G VS G+ + S D +G L +NA
Sbjct: 163 GIVGFKPSYGVVSRQGLCDLAMSFDQIGPLTKNA 196
>sp|A7GX27|GATA_CAMC5 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Campylobacter
curvus (strain 525.92) GN=gatA PE=3 SV=1
Length = 452
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 111/203 (54%), Gaps = 15/203 (7%)
Query: 35 LRRRRNPKLNGRVDFGAFLERFELIPFPQPPPPAARQPLAGLKFAIKDVFDVKGYVTGFG 94
LR + ++ + GA++E+ +P + G+ AIKD +KG+ G
Sbjct: 18 LRAQLEARIIKERELGAYVEQLTGLPLSKLGE--------GVPIAIKDNIQIKGWSVTSG 69
Query: 95 SPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDEFAFGITGENKHYGTPVNPQMPSHI 154
S + + A A + LL G+T +DEFA G T E+ YG +NP +H+
Sbjct: 70 SKILQ--GYIAPYNATAIEKLLARNLAAFGRTNMDEFAMGSTTESSFYGHTLNPLNHAHV 127
Query: 155 PGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFCGILGYRPSHGTVSMIGVLPNSQSL 214
PGGSS GSA AVA + ALG+DT G +R PA+FCG +G++P++G VS G+ S SL
Sbjct: 128 PGGSSGGSAAAVAGGIAIAALGSDTGGSIRQPAAFCGCVGFKPTYGRVSRYGLAAYSSSL 187
Query: 215 DTVGLLARN---ASILHRV--GH 232
D +G +A+N A+IL+ + GH
Sbjct: 188 DQIGPIAQNVEDAAILYDIIAGH 210
>sp|A4FW11|GATA_METM5 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=gatA PE=3
SV=1
Length = 431
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 90/154 (58%), Gaps = 2/154 (1%)
Query: 71 QPLAGLKFAIKDVFDVKGYVTGFGSPDWKRDHHEAERTAVVVTLLLKNGATCIGKTVLDE 130
+PL G A+K +VKGY S ++ + A VV L GA +G T +DE
Sbjct: 45 KPLYGKIVAVKSNINVKGYKISCASKTLEK--YVGTYDATVVKKLRSQGALIVGMTNMDE 102
Query: 131 FAFGITGENKHYGTPVNPQMPSHIPGGSSSGSAVAVAAQLVDFALGTDTIGCVRVPASFC 190
FA G +GE YG NP IPGGSSSGSA AVAA L D A+G+DT G +R PAS C
Sbjct: 103 FAGGSSGETSCYGPTKNPAALDRIPGGSSSGSAAAVAADLCDMAIGSDTGGSIRNPASHC 162
Query: 191 GILGYRPSHGTVSMIGVLPNSQSLDTVGLLARNA 224
GI+G++PS+G VS G+ + S D +G L +NA
Sbjct: 163 GIVGFKPSYGVVSRQGLCDLAMSFDQIGPLTKNA 196
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 210,021,557
Number of Sequences: 539616
Number of extensions: 8847908
Number of successful extensions: 28407
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 26907
Number of HSP's gapped (non-prelim): 1073
length of query: 575
length of database: 191,569,459
effective HSP length: 123
effective length of query: 452
effective length of database: 125,196,691
effective search space: 56588904332
effective search space used: 56588904332
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)